This directory contains Genome Browser and Blat application binaries built for standalone command-line use on various supported Linux and UNIX platforms. To determine which set of binaries to download, type "uname -a" on the command line to display your machine type. In most cases the usage statement for the application can be viewed by running the binary with no arguments. Some of these applications are able to connect to UCSC's public MySQL server. Such applications require an .hg.conf file to be present in the user's home directory. For more information and an example .hg.conf file, see: http://genome.ucsc.edu/goldenPath/help/mysql.html This directory contains mostly command-line tools. For instructions on how to install a Genome Browser web server locally, see: http://genome.ucsc.edu/goldenPath/help/mirror.html The directory external.<machine type> contains binaries from third-party projects that are required for some features of the genome browser web server. The UCSC Genome Browser and Blat software are free for academic, nonprofit, and personal use. A license is required for commercial download and installation of these binaries, with the exception of items built from the following source code directories, which are freely available for all uses: - kent/src/utils (includes big* tools) - kent/src/lib - kent/src/inc - kent/src/tagStorm - kent/src/parasol - kent/src/htslib - kent/src/hg/autoSql - kent/src/hg/autoXml For information about commercial licensing of the Genome Browser software, see http://genome.ucsc.edu/license/. The Blat and In-Silico PCR software may be commercially licensed through Kent Informatics (http://www.kentinformatics.com).
Name Last modified Size Description
Parent Directory - external.i386/ 25-May-2017 15:04 - external.x86_64/ 26-May-2017 06:25 - linux.x86_64/ 06-Jul-2017 09:36 - macOSX.x86_64/ 23-May-2017 16:07 - userApps.archive/ 19-Jun-2017 14:13 - userApps.src.tgz 06-Jul-2017 10:42 15M userApps.v348.src.tgz 02-May-2017 15:15 15M userApps.v349.src.tgz 23-May-2017 16:01 15M userApps.v350.src.tgz 13-Jun-2017 23:26 15M userApps.v351.src.tgz 06-Jul-2017 10:42 15M