This track shows 9-mer peptides from the proteome of Ebola virus (KJ660347v2) predicted to bind to at least 10% of the MHCI alleles accepted by the netMHC tool.
HLA-A01:01 HLA-A02:01 HLA-A02:02 HLA-A02:03 HLA-A02:06 HLA-A02:11 HLA-A02:12 HLA-A02:16 HLA-A02:17 HLA-A02:19 HLA-A02:50 HLA-A03:01 HLA-A11:01 HLA-A23:01 HLA-A24:02 HLA-A24:03 HLA-A25:01 HLA-A26:01 HLA-A26:02 HLA-A26:03 HLA-A29:02 HLA-A30:01 HLA-A30:02 HLA-A31:01 HLA-A32:01 HLA-A32:07 HLA-A32:15 HLA-A33:01 HLA-A66:01 HLA-A68:01 HLA-A68:02 HLA-A68:23 HLA-A69:01 HLA-A80:01 HLA-B07:02 HLA-B08:01 HLA-B08:02 HLA-B08:03 HLA-B14:02 HLA-B15:01 HLA-B15:02 HLA-B15:03 HLA-B15:09 HLA-B15:17 HLA-B18:01 HLA-B27:05 HLA-B27:20 HLA-B35:01 HLA-B35:03 HLA-B38:01 HLA-B39:01 HLA-B40:01 HLA-B40:02 HLA-B40:13 HLA-B42:01 HLA-B44:02 HLA-B44:03 HLA-B45:01 HLA-B46:01 HLA-B48:01 HLA-B51:01 HLA-B53:01 HLA-B54:01 HLA-B57:01 HLA-B58:01 HLA-B73:01 HLA-B83:01 HLA-C03:03 HLA-C04:01 HLA-C05:01 HLA-C06:02 HLA-C07:01 HLA-C07:02 HLA-C08:02 HLA-C12:03 HLA-C14:02 HLA-C15:02 HLA-E01:01
This track was created by Arjun Roa and Maximilian Haeussler.
Lundegaard C, Lamberth K, Harndahl M, Buus S, Lund O, Nielsen NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11. Nucleic Acids Res1;36(Web Server issue):W509-12. 2008 PMID: 18463140; PMC: PMC2447772
Yip YL, Scheib H, Diemand AV, Gattiker A, Famiglietti LM, Gasteiger E, Bairoch A. The Swiss-Prot variant page and the ModSNP database: a resource for sequence and structure information on human protein variants. Hum Mutat. 2004 May;23(5):464-70. PMID: 15108278