Description

This track shows epitopes that were validated in published studies, mostly from the SARS 2003 outbreak.

Summary

The epitope sequences were collected by Nerli et al, partially from the IEDB database, partially from the original literature. The details page shows how similar the SARS-Cov-2 epitope is to the SARS epitope.

Data Access

The raw data can be explored interactively with the Table Browser, or combined with other datasets in the Data Integrator tool.

Credits

The UCSC SARS-CoV-2 genome browser and associated data annotation tracks were funded by generous private donors to the UC Santa Cruz Genomics Institute. Data collected by Sgourakis Research Group, U.C. Santa Cruz

References

Nerli S, Sgourakis N: Structure-based modeling of SARS-CoV-2 peptide/HLA-A02 antigens, Biorxiv 2020