0 nestedRepeats,237 snp148,978 snp148,1006 snp148,1189 snp148,1551 snp148,1565 snp148Mult,999 snp148Mult,1027 snp148Mult,1210 snp148Mult,1572 snp148Mult,1586 transMapEnsemblV5,670 transMapEstV5,639 transMapRefSeqV5,639 transMapRnaV5,639 transMapV5,745 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 snp148,882 snp148Mult,903 0.010000 snp148,1030 snp148Mult,1051 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1 refGene,296 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,137 0.5 augustusGene,139 est,706 intronEst,787 mrna,422 snp148,1537 snp148Mult,1558 transMapEnsemblV5,225 transMapEnsemblV5,359 transMapEstV5,194 transMapEstV5,328 transMapRefSeqV5,194 transMapRefSeqV5,328 transMapRnaV5,194 transMapRnaV5,328 transMapV5,300 transMapV5,434 xenoRefGene,262 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 000 est,666 intronEst,747 transMapV5,110 074 gap,153 1 augustusGene,311 chainEquCab2,385 chainEquCab2,516 chainEquCab2,706 chainEquCab2,1105 chainHg38,385 chainHg38,516 chainHg38,706 chainHg38,1105 chainMm10,385 chainMm10,516 chainMm10,706 chainMm10,1105 chainNetEquCab2,388 chainNetEquCab2,519 chainNetEquCab2,709 chainNetEquCab2,1108 chainNetHg38,388 chainNetHg38,519 chainNetHg38,709 chainNetHg38,1108 chainNetMm10,388 chainNetMm10,519 chainNetMm10,709 chainNetMm10,1108 chainNetRn6,391 chainNetRn6,522 chainNetRn6,712 chainNetRn6,1111 chainRn6,388 chainRn6,519 chainRn6,709 chainRn6,1108 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 est,789 gap,151 gap,152 genscan,228 intronEst,873 mrna,506 netEquCab2,385 netEquCab2,516 netEquCab2,706 netEquCab2,1105 netHg38,385 netHg38,516 netHg38,706 netHg38,1105 netMm10,385 netMm10,516 netMm10,706 netMm10,1105 netRn6,388 netRn6,519 netRn6,709 netRn6,1108 refGene,420 snp148,78 snp148,343 snp148,1165 snp148,1552 snp148,1558 snp148,1586 snp148,2277 snp148,2279 snp148Mult,132 snp148Mult,364 snp148Mult,1186 snp148Mult,1573 snp148Mult,1579 snp148Mult,1607 snp148Mult,2298 snp148Mult,2300 transMapEnsemblV5,779 transMapEstV5,748 transMapRefSeqV5,748 transMapRnaV5,748 transMapV5,854 xenoRefGene,385 1.0 snp148,881 snp148Mult,902 transMapEnsemblV5,367 transMapEstV5,336 transMapRefSeqV5,336 transMapRnaV5,336 transMapV5,442 10 geneid,193 snp148,1556 snp148,1568 snp148Mult,1577 snp148Mult,1589 100 augustusGene,135 chainEquCab2,1073 chainHg38,1073 chainMm10,1073 chainNetEquCab2,1076 chainNetHg38,1076 chainNetMm10,1076 chainNetRn6,1079 chainRn6,1076 gap,137 microsat,70 nestedRepeats,230 netEquCab2,1073 netHg38,1073 netMm10,1073 netRn6,1076 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainEquCab2,745 chainHg38,745 chainMm10,745 chainNetEquCab2,748 chainNetHg38,748 chainNetMm10,748 chainNetRn6,751 chainRn6,748 nestedRepeats,238 netEquCab2,745 netHg38,745 netMm10,745 netRn6,748 1000-2000 augustusGene,162 1000000 transMapEnsemblV5,672 transMapEstV5,641 transMapRefSeqV5,641 transMapRnaV5,641 transMapV5,747 1000genomes snp148,1623 snp148Mult,1644 103-7 chainEquCab2,1106 chainHg38,1106 chainMm10,1106 chainNetEquCab2,1109 chainNetHg38,1109 chainNetMm10,1109 chainNetRn6,1112 chainRn6,1109 netEquCab2,1106 netHg38,1106 netMm10,1106 netRn6,1109 10607616 nestedRepeats,394 rmsk,417 10779490 geneid,197 10973072 nestedRepeats,361 rmsk,384 11 chainEquCab2,702 chainEquCab2,709 chainHg38,702 chainHg38,709 chainMm10,702 chainMm10,709 chainNetEquCab2,705 chainNetEquCab2,712 chainNetHg38,705 chainNetHg38,712 chainNetMm10,705 chainNetMm10,712 chainNetRn6,708 chainNetRn6,715 chainRn6,705 chainRn6,712 netEquCab2,702 netEquCab2,709 netHg38,702 netHg38,709 netMm10,702 netMm10,709 netRn6,705 netRn6,712 111 chainEquCab2,704 chainEquCab2,710 chainHg38,704 chainHg38,710 chainMm10,704 chainMm10,710 chainNetEquCab2,707 chainNetEquCab2,713 chainNetHg38,707 chainNetHg38,713 chainNetMm10,707 chainNetMm10,713 chainNetRn6,710 chainNetRn6,716 chainRn6,707 chainRn6,713 netEquCab2,704 netEquCab2,710 netHg38,704 netHg38,710 netMm10,704 netMm10,710 netRn6,707 netRn6,713 11125122 snp148,2282 snp148Mult,2303 11484-9 chainEquCab2,1075 chainHg38,1075 chainMm10,1075 chainNetEquCab2,1078 chainNetHg38,1078 chainNetMm10,1078 chainNetRn6,1081 chainRn6,1078 netEquCab2,1075 netHg38,1075 netMm10,1075 netRn6,1078 115-26 chainEquCab2,1037 chainHg38,1037 chainMm10,1037 chainNetEquCab2,1040 chainNetHg38,1040 chainNetMm10,1040 chainNetRn6,1043 chainRn6,1040 netEquCab2,1037 netHg38,1037 netMm10,1037 netRn6,1040 117900 chainEquCab2,726 chainEquCab2,738 chainHg38,726 chainHg38,738 chainMm10,726 chainMm10,738 chainNetEquCab2,729 chainNetEquCab2,741 chainNetHg38,729 chainNetHg38,741 chainNetMm10,729 chainNetMm10,741 chainNetRn6,732 chainNetRn6,744 chainRn6,729 chainRn6,741 netEquCab2,726 netEquCab2,738 netHg38,726 netHg38,738 netMm10,726 netMm10,738 netRn6,729 netRn6,741 118300 chainEquCab2,750 chainHg38,750 chainMm10,750 chainNetEquCab2,753 chainNetHg38,753 chainNetMm10,753 chainNetRn6,756 chainRn6,753 netEquCab2,750 netHg38,750 netMm10,750 netRn6,753 11928468 chainEquCab2,1039 chainHg38,1039 chainMm10,1039 chainNetEquCab2,1042 chainNetHg38,1042 chainNetMm10,1042 chainNetRn6,1045 chainRn6,1042 netEquCab2,1039 netHg38,1039 netMm10,1039 netRn6,1042 11932250 est,813 intronEst,897 mrna,530 refGene,350 xenoRefGene,315 12 est,809 intronEst,893 mrna,526 refGene,346 snp148,2006 snp148Mult,2027 transMapEnsemblV5,749 transMapEnsemblV5,815 transMapEstV5,718 transMapEstV5,784 transMapRefSeqV5,718 transMapRefSeqV5,784 transMapRnaV5,718 transMapRnaV5,784 transMapV5,824 transMapV5,890 xenoRefGene,311 12111 chainEquCab2,712 chainHg38,712 chainMm10,712 chainNetEquCab2,715 chainNetHg38,715 chainNetMm10,715 chainNetRn6,718 chainRn6,715 netEquCab2,712 netHg38,712 netMm10,712 netRn6,715 12529312 chainEquCab2,1108 chainHg38,1108 chainMm10,1108 chainNetEquCab2,1111 chainNetHg38,1111 chainNetMm10,1111 chainNetRn6,1114 chainRn6,1111 netEquCab2,1108 netHg38,1108 netMm10,1108 netRn6,1111 127-163 genscan,207 13 chainEquCab2,1104 chainHg38,1104 chainMm10,1104 chainNetEquCab2,1107 chainNetHg38,1107 chainNetMm10,1107 chainNetRn6,1110 chainRn6,1107 netEquCab2,1104 netHg38,1104 netMm10,1104 netRn6,1107 1300 chainEquCab2,746 chainHg38,746 chainMm10,746 chainNetEquCab2,749 chainNetHg38,749 chainNetMm10,749 chainNetRn6,752 chainRn6,749 netEquCab2,746 netHg38,746 netMm10,746 netRn6,749 134-41 windowmaskerSdust,112 14500911 chainEquCab2,1077 chainHg38,1077 chainMm10,1077 chainNetEquCab2,1080 chainNetHg38,1080 chainNetMm10,1080 chainNetRn6,1083 chainRn6,1080 netEquCab2,1077 netHg38,1077 netMm10,1077 netRn6,1080 14534192 augustusGene,341 14681350 est,795 intronEst,879 mrna,512 148 snp148,3 snp148,8 snp148,36 snp148,54 snp148Mult,3 snp148Mult,8 snp148Mult,46 snp148Mult,124 snp148Mult,154 15 microsat,30 microsat,79 microsat,130 refGene,268 simpleRepeat,90 windowmaskerSdust,109 xenoRefGene,234 152111 chainEquCab2,715 chainHg38,715 chainMm10,715 chainNetEquCab2,718 chainNetHg38,718 chainNetMm10,718 chainNetRn6,721 chainRn6,718 netEquCab2,715 netHg38,715 netMm10,715 netRn6,718 15608248 refGene,426 xenoRefGene,391 158 gap,154 16 nestedRepeats,357 rmsk,380 16287941 windowmaskerSdust,114 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 transMapEnsemblV5,748 transMapEstV5,717 transMapRefSeqV5,717 transMapRnaV5,717 transMapV5,823 1763-73 transMapEnsemblV5,750 transMapEstV5,719 transMapRefSeqV5,719 transMapRnaV5,719 transMapV5,825 17989246 transMapEnsemblV5,752 transMapEstV5,721 transMapRefSeqV5,721 transMapRnaV5,721 transMapV5,827 18085818 transMapEnsemblV5,818 transMapEstV5,787 transMapRefSeqV5,787 transMapRnaV5,787 transMapV5,893 18218656 augustusGene,316 transMapEnsemblV5,784 transMapEstV5,753 transMapRefSeqV5,753 transMapRnaV5,753 transMapV5,859 18428791 geneid,178 19 augustusGene,336 193 gap,133 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1996 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1997 genscan,150 genscan,224 1998 genscan,168 genscan,205 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 augustusGene,143 augustusGene,338 chainEquCab2,419 chainEquCab2,424 chainEquCab2,707 chainHg38,419 chainHg38,424 chainHg38,707 chainMm10,419 chainMm10,424 chainMm10,707 chainNetEquCab2,422 chainNetEquCab2,427 chainNetEquCab2,710 chainNetHg38,422 chainNetHg38,427 chainNetHg38,710 chainNetMm10,422 chainNetMm10,427 chainNetMm10,710 chainNetRn6,425 chainNetRn6,430 chainNetRn6,713 chainRn6,422 chainRn6,427 chainRn6,710 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 netEquCab2,419 netEquCab2,424 netEquCab2,707 netHg38,419 netHg38,424 netHg38,707 netMm10,419 netMm10,424 netMm10,707 netRn6,422 netRn6,427 netRn6,710 simpleRepeat,92 snp148,259 snp148,409 snp148,740 snp148,760 snp148,1553 snp148Mult,280 snp148Mult,430 snp148Mult,761 snp148Mult,781 snp148Mult,1574 windowmaskerSdust,111 20 chainEquCab2,1074 chainHg38,1074 chainMm10,1074 chainNetEquCab2,1077 chainNetHg38,1077 chainNetMm10,1077 chainNetRn6,1080 chainRn6,1077 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netEquCab2,1074 netHg38,1074 netMm10,1074 netRn6,1077 transMapEnsemblV5,375 transMapEstV5,344 transMapRefSeqV5,344 transMapRnaV5,344 transMapV5,450 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 geneid,191 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2001 snp148,2275 snp148Mult,2296 2002 chainEquCab2,1036 chainHg38,1036 chainMm10,1036 chainNetEquCab2,1039 chainNetHg38,1039 chainNetMm10,1039 chainNetRn6,1042 chainRn6,1039 est,807 intronEst,891 mrna,524 netEquCab2,1036 netHg38,1036 netMm10,1036 netRn6,1039 refGene,344 xenoRefGene,309 2003 augustusGene,334 chainEquCab2,1070 chainEquCab2,1102 chainHg38,1070 chainHg38,1102 chainMm10,1070 chainMm10,1102 chainNetEquCab2,1073 chainNetEquCab2,1105 chainNetHg38,1073 chainNetHg38,1105 chainNetMm10,1073 chainNetMm10,1105 chainNetRn6,1076 chainNetRn6,1108 chainRn6,1073 chainRn6,1105 netEquCab2,1070 netEquCab2,1102 netHg38,1070 netHg38,1102 netMm10,1070 netMm10,1102 netRn6,1073 netRn6,1105 2004 est,787 intronEst,871 mrna,504 2005 refGene,418 xenoRefGene,383 2006 windowmaskerSdust,107 2007 chainEquCab2,5 chainEquCab2,67 chainEquCab2,301 chainEquCab2,1009 chainHg38,1009 chainMm10,1009 chainNetEquCab2,6 chainNetEquCab2,70 chainNetEquCab2,304 chainNetEquCab2,1012 chainNetEquCab2Viewchain,4 chainNetEquCab2Viewnet,4 chainNetHg38,1012 chainNetMm10,1012 chainNetRn6,1015 chainRn6,1012 geneid,171 netEquCab2,5 netEquCab2,67 netEquCab2,301 netEquCab2,1009 netHg38,1009 netMm10,1009 netRn6,1012 transMapEnsemblV5,746 transMapEnsemblV5,812 transMapEstV5,715 transMapEstV5,781 transMapRefSeqV5,715 transMapRefSeqV5,781 transMapRnaV5,715 transMapRnaV5,781 transMapV5,821 transMapV5,887 2008 augustusGene,309 transMapEnsemblV5,777 transMapEstV5,746 transMapRefSeqV5,746 transMapRnaV5,746 transMapV5,852 2009 gap,17 gold,19 2011 chainMm10,5 chainMm10,67 chainMm10,301 chainNetMm10,6 chainNetMm10,70 chainNetMm10,304 chainNetMm10Viewchain,4 chainNetMm10Viewnet,4 netMm10,5 netMm10,67 netMm10,301 2013 chainHg38,5 chainHg38,67 chainHg38,301 chainNetHg38,6 chainNetHg38,70 chainNetHg38,304 chainNetHg38Viewchain,4 chainNetHg38Viewnet,4 est,762 intronEst,846 mrna,479 netHg38,5 netHg38,67 netHg38,301 2014 chainNetRn6,6 chainNetRn6,71 chainNetRn6,306 chainNetRn6Viewchain,4 chainNetRn6Viewnet,4 chainRn6,5 chainRn6,68 chainRn6,303 netRn6,5 netRn6,68 netRn6,303 refGene,385 xenoRefGene,350 2111 chainEquCab2,711 chainHg38,711 chainMm10,711 chainNetEquCab2,714 chainNetHg38,714 chainNetMm10,714 chainNetRn6,717 chainRn6,714 netEquCab2,711 netHg38,711 netMm10,711 netRn6,714 217900 chainEquCab2,727 chainEquCab2,739 chainHg38,727 chainHg38,739 chainMm10,727 chainMm10,739 chainNetEquCab2,730 chainNetEquCab2,742 chainNetHg38,730 chainNetHg38,742 chainNetMm10,730 chainNetMm10,742 chainNetRn6,733 chainNetRn6,745 chainRn6,730 chainRn6,742 netEquCab2,727 netEquCab2,739 netHg38,727 netHg38,739 netMm10,727 netMm10,739 netRn6,730 netRn6,742 218300 chainEquCab2,751 chainHg38,751 chainMm10,751 chainNetEquCab2,754 chainNetHg38,754 chainNetMm10,754 chainNetRn6,757 chainRn6,754 netEquCab2,751 netHg38,751 netMm10,751 netRn6,754 22 windowmaskerSdust,110 225 transMapEnsemblV5,717 transMapEstV5,686 transMapRefSeqV5,686 transMapRnaV5,686 transMapV5,792 22900 chainEquCab2,724 chainEquCab2,736 chainHg38,724 chainHg38,736 chainMm10,724 chainMm10,736 chainNetEquCab2,727 chainNetEquCab2,739 chainNetHg38,727 chainNetHg38,739 chainNetMm10,727 chainNetMm10,739 chainNetRn6,730 chainNetRn6,742 chainRn6,727 chainRn6,739 netEquCab2,724 netEquCab2,736 netHg38,724 netHg38,736 netMm10,724 netMm10,736 netRn6,727 netRn6,739 23193287 est,769 intronEst,853 mrna,486 23300 chainEquCab2,748 chainHg38,748 chainMm10,748 chainNetEquCab2,751 chainNetHg38,751 chainNetMm10,751 chainNetRn6,754 chainRn6,751 netEquCab2,748 netHg38,748 netMm10,748 netRn6,751 24 augustusGene,312 transMapEnsemblV5,780 transMapEstV5,749 transMapRefSeqV5,749 transMapRnaV5,749 transMapV5,855 24259432 refGene,392 xenoRefGene,357 243 geneid,161 geneid,184 25 genscan,226 transMapV5,113 xenoRefGene,269 252111 chainEquCab2,716 chainHg38,716 chainMm10,716 chainNetEquCab2,719 chainNetHg38,719 chainNetMm10,719 chainNetRn6,722 chainRn6,719 netEquCab2,716 netHg38,716 netMm10,716 netRn6,719 261 gap,148 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 268 genscan,227 27 microsat,131 simpleRepeat,91 29 snp148,2278 snp148Mult,2299 2900 chainEquCab2,723 chainEquCab2,735 chainHg38,723 chainHg38,735 chainMm10,723 chainMm10,735 chainNetEquCab2,726 chainNetEquCab2,738 chainNetHg38,726 chainNetHg38,738 chainNetMm10,726 chainNetMm10,738 chainNetRn6,729 chainNetRn6,741 chainRn6,726 chainRn6,738 netEquCab2,723 netEquCab2,735 netHg38,723 netHg38,735 netMm10,723 netMm10,735 netRn6,726 netRn6,738 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 snp148,1684 snp148Mult,1705 3 augustusGene,141 chainEquCab2,431 chainEquCab2,708 chainHg38,431 chainHg38,708 chainMm10,431 chainMm10,708 chainNetEquCab2,434 chainNetEquCab2,711 chainNetHg38,434 chainNetHg38,711 chainNetMm10,434 chainNetMm10,711 chainNetRn6,437 chainNetRn6,714 chainRn6,434 chainRn6,711 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 est,479 est,532 est,586 gap,132 intronEst,113 intronEst,560 intronEst,613 intronEst,667 microsat,68 netEquCab2,431 netEquCab2,708 netHg38,431 netHg38,708 netMm10,431 netMm10,708 netRn6,434 netRn6,711 snp148,260 snp148,541 snp148,612 snp148,717 snp148,745 snp148,1554 snp148,1598 snp148Mult,118 snp148Mult,281 snp148Mult,562 snp148Mult,633 snp148Mult,738 snp148Mult,766 snp148Mult,1575 snp148Mult,1619 transMapEnsemblV5,814 transMapEstV5,783 transMapRefSeqV5,783 transMapRnaV5,783 transMapV5,889 3.1 augustusGene,25 30 chainEquCab2,1072 chainHg38,1072 chainMm10,1072 chainNetEquCab2,1075 chainNetHg38,1075 chainNetMm10,1075 chainNetRn6,1078 chainRn6,1075 netEquCab2,1072 netHg38,1072 netMm10,1072 netRn6,1075 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainEquCab2,680 chainHg38,680 chainMm10,680 chainNetEquCab2,683 chainNetHg38,683 chainNetMm10,683 chainNetRn6,686 chainRn6,683 netEquCab2,680 netHg38,680 netMm10,680 netRn6,683 308-11 snp148,2280 snp148Mult,2301 317900 chainEquCab2,728 chainEquCab2,740 chainHg38,728 chainHg38,740 chainMm10,728 chainMm10,740 chainNetEquCab2,731 chainNetEquCab2,743 chainNetHg38,731 chainNetHg38,743 chainNetMm10,731 chainNetMm10,743 chainNetRn6,734 chainNetRn6,746 chainRn6,731 chainRn6,743 netEquCab2,728 netEquCab2,740 netHg38,728 netHg38,740 netMm10,728 netMm10,740 netRn6,731 netRn6,743 318300 chainEquCab2,752 chainHg38,752 chainMm10,752 chainNetEquCab2,755 chainNetHg38,755 chainNetMm10,755 chainNetRn6,758 chainRn6,755 netEquCab2,752 netHg38,752 netMm10,752 netRn6,755 32 est,790 intronEst,83 intronEst,874 mrna,507 32111 chainEquCab2,713 chainHg38,713 chainMm10,713 chainNetEquCab2,716 chainNetHg38,716 chainNetMm10,716 chainNetRn6,719 chainRn6,716 netEquCab2,713 netHg38,713 netMm10,713 netRn6,716 33 refGene,421 xenoRefGene,386 3300 chainEquCab2,747 chainHg38,747 chainMm10,747 chainNetEquCab2,750 chainNetHg38,750 chainNetMm10,750 chainNetRn6,753 chainRn6,750 netEquCab2,747 netHg38,747 netMm10,747 netRn6,750 350 chainEquCab2,718 chainEquCab2,730 chainHg38,718 chainHg38,730 chainMm10,718 chainMm10,730 chainNetEquCab2,721 chainNetEquCab2,733 chainNetHg38,721 chainNetHg38,733 chainNetMm10,721 chainNetMm10,733 chainNetRn6,724 chainNetRn6,736 chainRn6,721 chainRn6,733 netEquCab2,718 netEquCab2,730 netHg38,718 netHg38,730 netMm10,718 netMm10,730 netRn6,721 netRn6,733 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 3_prime_utr_variant snp148,711 snp148,810 snp148Mult,732 snp148Mult,831 4 est,810 geneid,174 geneid,194 intronEst,894 mrna,527 refGene,347 snp148,262 snp148Mult,283 xenoRefGene,312 4.3 geneid,176 400 transMapV5,109 41 est,764 intronEst,848 mrna,481 418-420 nestedRepeats,359 rmsk,382 42 refGene,387 xenoRefGene,352 425 chainEquCab2,719 chainEquCab2,731 chainHg38,719 chainHg38,731 chainMm10,719 chainMm10,731 chainNetEquCab2,722 chainNetEquCab2,734 chainNetHg38,722 chainNetHg38,734 chainNetMm10,722 chainNetMm10,734 chainNetRn6,725 chainNetRn6,737 chainRn6,722 chainRn6,734 netEquCab2,719 netEquCab2,731 netHg38,719 netHg38,731 netMm10,719 netMm10,731 netRn6,722 netRn6,734 450 chainEquCab2,720 chainEquCab2,732 chainHg38,720 chainHg38,732 chainMm10,720 chainMm10,732 chainNetEquCab2,723 chainNetEquCab2,735 chainNetHg38,723 chainNetHg38,735 chainNetMm10,723 chainNetMm10,735 chainNetRn6,726 chainNetRn6,738 chainRn6,723 chainRn6,735 netEquCab2,720 netEquCab2,732 netHg38,720 netHg38,732 netMm10,720 netMm10,732 netRn6,723 netRn6,735 5 augustusGene,313 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 est,476 est,517 est,543 intronEst,557 intronEst,598 intronEst,624 snp148,553 snp148,728 snp148,765 snp148,1396 snp148,1406 snp148,1415 snp148,1425 snp148Mult,574 snp148Mult,749 snp148Mult,786 snp148Mult,1417 snp148Mult,1427 snp148Mult,1436 snp148Mult,1446 transMapEnsemblV5,9 transMapEnsemblV5,781 transMapEstV5,7 transMapEstV5,750 transMapRefSeqV5,8 transMapRefSeqV5,750 transMapRnaV5,8 transMapRnaV5,750 transMapV5,6 transMapV5,856 5-base gc5BaseBw,6 gc5BaseBw,28 50 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 500 est,33 intronEst,45 511-5 geneid,195 573-80 microsat,133 simpleRepeat,93 57900 chainEquCab2,725 chainEquCab2,737 chainHg38,725 chainHg38,737 chainMm10,725 chainMm10,737 chainNetEquCab2,728 chainNetEquCab2,740 chainNetHg38,728 chainNetHg38,740 chainNetMm10,728 chainNetMm10,740 chainNetRn6,731 chainNetRn6,743 chainRn6,728 chainRn6,740 netEquCab2,725 netEquCab2,737 netHg38,725 netHg38,737 netMm10,725 netMm10,737 netRn6,728 netRn6,740 58300 chainEquCab2,749 chainHg38,749 chainMm10,749 chainNetEquCab2,752 chainNetHg38,752 chainNetMm10,752 chainNetRn6,755 chainRn6,752 netEquCab2,749 netHg38,749 netMm10,749 netRn6,752 5_prime_utr_variant snp148,722 snp148,809 snp148Mult,743 snp148Mult,830 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 rmsk,414 rmsk,435 rmsk,436 6.0 chainNetRn6,8 chainNetRn6,73 chainNetRn6,308 chainNetRn6Viewchain,6 chainNetRn6Viewnet,6 chainRn6,7 chainRn6,70 chainRn6,305 netRn6,7 netRn6,70 netRn6,305 600 chainEquCab2,721 chainEquCab2,733 chainHg38,721 chainHg38,733 chainMm10,721 chainMm10,733 chainNetEquCab2,724 chainNetEquCab2,736 chainNetHg38,724 chainNetHg38,736 chainNetMm10,724 chainNetMm10,736 chainNetRn6,727 chainNetRn6,739 chainRn6,724 chainRn6,736 netEquCab2,721 netEquCab2,733 netHg38,721 netHg38,733 netMm10,721 netMm10,733 netRn6,724 netRn6,736 632 gold,154 637-44 augustusGene,314 transMapEnsemblV5,782 transMapEstV5,751 transMapRefSeqV5,751 transMapRnaV5,751 transMapV5,857 656-64 est,811 intronEst,895 mrna,528 refGene,348 xenoRefGene,313 657-63 nestedRepeats,392 rmsk,415 69 gap,147 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 72111 chainEquCab2,714 chainHg38,714 chainMm10,714 chainNetEquCab2,717 chainNetHg38,717 chainNetMm10,717 chainNetRn6,720 chainRn6,717 netEquCab2,714 netHg38,714 netMm10,714 netRn6,717 743-8 nestedRepeats,414 rmsk,437 75 gold,153 750 chainEquCab2,742 chainHg38,742 chainMm10,742 chainNetEquCab2,745 chainNetHg38,745 chainNetMm10,745 chainNetRn6,748 chainRn6,745 est,665 intronEst,746 netEquCab2,742 netHg38,742 netMm10,742 netRn6,745 78-94 genscan,229 825 chainEquCab2,743 chainHg38,743 chainMm10,743 chainNetEquCab2,746 chainNetHg38,746 chainNetMm10,746 chainNetRn6,749 chainRn6,746 netEquCab2,743 netHg38,743 netMm10,743 netRn6,746 850 chainEquCab2,744 chainHg38,744 chainMm10,744 chainNetEquCab2,747 chainNetHg38,747 chainNetMm10,747 chainNetRn6,750 chainRn6,747 netEquCab2,744 netHg38,744 netMm10,744 netRn6,747 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 900 chainEquCab2,722 chainEquCab2,734 chainHg38,722 chainHg38,734 chainMm10,722 chainMm10,734 chainNetEquCab2,725 chainNetEquCab2,737 chainNetHg38,725 chainNetHg38,737 chainNetMm10,725 chainNetMm10,737 chainNetRn6,728 chainNetRn6,740 chainRn6,725 chainRn6,737 netEquCab2,722 netEquCab2,734 netHg38,722 netHg38,734 netMm10,722 netMm10,734 netRn6,725 netRn6,737 9149143 genscan,231 96 est,713 intronEst,794 mrna,429 refGene,303 9862982 microsat,135 simpleRepeat,95 a augustusGene,117 augustusGene,129 augustusGene,153 augustusGene,216 augustusGene,219 augustusGene,234 augustusGene,324 augustusGene,329 chainEquCab2,75 chainEquCab2,144 chainEquCab2,196 chainEquCab2,451 chainEquCab2,461 chainEquCab2,465 chainEquCab2,532 chainEquCab2,549 chainEquCab2,552 chainEquCab2,618 chainEquCab2,623 chainEquCab2,628 chainEquCab2,632 chainEquCab2,643 chainEquCab2,675 chainEquCab2,794 chainEquCab2,808 chainEquCab2,814 chainEquCab2,820 chainEquCab2,824 chainEquCab2,827 chainEquCab2,855 chainEquCab2,1045 chainEquCab2,1069 chainEquCab2,1085 chainHg38,75 chainHg38,144 chainHg38,196 chainHg38,451 chainHg38,461 chainHg38,465 chainHg38,532 chainHg38,549 chainHg38,552 chainHg38,618 chainHg38,623 chainHg38,628 chainHg38,632 chainHg38,643 chainHg38,675 chainHg38,794 chainHg38,808 chainHg38,814 chainHg38,820 chainHg38,824 chainHg38,827 chainHg38,855 chainHg38,1045 chainHg38,1069 chainHg38,1085 chainMm10,75 chainMm10,144 chainMm10,196 chainMm10,451 chainMm10,461 chainMm10,465 chainMm10,532 chainMm10,549 chainMm10,552 chainMm10,618 chainMm10,623 chainMm10,628 chainMm10,632 chainMm10,643 chainMm10,675 chainMm10,794 chainMm10,808 chainMm10,814 chainMm10,820 chainMm10,824 chainMm10,827 chainMm10,855 chainMm10,1045 chainMm10,1069 chainMm10,1085 chainNetEquCab2,78 chainNetEquCab2,147 chainNetEquCab2,199 chainNetEquCab2,454 chainNetEquCab2,464 chainNetEquCab2,468 chainNetEquCab2,535 chainNetEquCab2,552 chainNetEquCab2,555 chainNetEquCab2,621 chainNetEquCab2,626 chainNetEquCab2,631 chainNetEquCab2,635 chainNetEquCab2,646 chainNetEquCab2,678 chainNetEquCab2,797 chainNetEquCab2,811 chainNetEquCab2,817 chainNetEquCab2,823 chainNetEquCab2,827 chainNetEquCab2,830 chainNetEquCab2,858 chainNetEquCab2,1048 chainNetEquCab2,1072 chainNetEquCab2,1088 chainNetHg38,78 chainNetHg38,147 chainNetHg38,199 chainNetHg38,454 chainNetHg38,464 chainNetHg38,468 chainNetHg38,535 chainNetHg38,552 chainNetHg38,555 chainNetHg38,621 chainNetHg38,626 chainNetHg38,631 chainNetHg38,635 chainNetHg38,646 chainNetHg38,678 chainNetHg38,797 chainNetHg38,811 chainNetHg38,817 chainNetHg38,823 chainNetHg38,827 chainNetHg38,830 chainNetHg38,858 chainNetHg38,1048 chainNetHg38,1072 chainNetHg38,1088 chainNetMm10,78 chainNetMm10,147 chainNetMm10,199 chainNetMm10,454 chainNetMm10,464 chainNetMm10,468 chainNetMm10,535 chainNetMm10,552 chainNetMm10,555 chainNetMm10,621 chainNetMm10,626 chainNetMm10,631 chainNetMm10,635 chainNetMm10,646 chainNetMm10,678 chainNetMm10,797 chainNetMm10,811 chainNetMm10,817 chainNetMm10,823 chainNetMm10,827 chainNetMm10,830 chainNetMm10,858 chainNetMm10,1048 chainNetMm10,1072 chainNetMm10,1088 chainNetRn6,80 chainNetRn6,149 chainNetRn6,201 chainNetRn6,457 chainNetRn6,467 chainNetRn6,471 chainNetRn6,538 chainNetRn6,555 chainNetRn6,558 chainNetRn6,624 chainNetRn6,629 chainNetRn6,634 chainNetRn6,638 chainNetRn6,649 chainNetRn6,681 chainNetRn6,800 chainNetRn6,814 chainNetRn6,820 chainNetRn6,826 chainNetRn6,830 chainNetRn6,833 chainNetRn6,861 chainNetRn6,1051 chainNetRn6,1075 chainNetRn6,1091 chainRn6,77 chainRn6,146 chainRn6,198 chainRn6,454 chainRn6,464 chainRn6,468 chainRn6,535 chainRn6,552 chainRn6,555 chainRn6,621 chainRn6,626 chainRn6,631 chainRn6,635 chainRn6,646 chainRn6,678 chainRn6,797 chainRn6,811 chainRn6,817 chainRn6,823 chainRn6,827 chainRn6,830 chainRn6,858 chainRn6,1048 chainRn6,1072 chainRn6,1088 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 est,116 est,133 est,168 est,194 est,267 est,386 est,466 est,470 est,596 est,622 est,630 est,682 est,701 gap,100 gap,104 gc5BaseBw,45 geneid,53 geneid,64 geneid,115 genscan,103 genscan,133 gold,118 gold,124 intronEst,116 intronEst,149 intronEst,197 intronEst,214 intronEst,249 intronEst,275 intronEst,348 intronEst,467 intronEst,547 intronEst,551 intronEst,677 intronEst,703 intronEst,711 intronEst,763 intronEst,782 microsat,53 microsat,119 mrna,62 mrna,79 mrna,114 mrna,140 mrna,213 mrna,332 mrna,398 mrna,417 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netEquCab2,75 netEquCab2,144 netEquCab2,196 netEquCab2,451 netEquCab2,461 netEquCab2,465 netEquCab2,532 netEquCab2,549 netEquCab2,552 netEquCab2,618 netEquCab2,623 netEquCab2,628 netEquCab2,632 netEquCab2,643 netEquCab2,675 netEquCab2,794 netEquCab2,808 netEquCab2,814 netEquCab2,820 netEquCab2,824 netEquCab2,827 netEquCab2,855 netEquCab2,1045 netEquCab2,1069 netEquCab2,1085 netHg38,75 netHg38,144 netHg38,196 netHg38,451 netHg38,461 netHg38,465 netHg38,532 netHg38,549 netHg38,552 netHg38,618 netHg38,623 netHg38,628 netHg38,632 netHg38,643 netHg38,675 netHg38,794 netHg38,808 netHg38,814 netHg38,820 netHg38,824 netHg38,827 netHg38,855 netHg38,1045 netHg38,1069 netHg38,1085 netMm10,75 netMm10,144 netMm10,196 netMm10,451 netMm10,461 netMm10,465 netMm10,532 netMm10,549 netMm10,552 netMm10,618 netMm10,623 netMm10,628 netMm10,632 netMm10,643 netMm10,675 netMm10,794 netMm10,808 netMm10,814 netMm10,820 netMm10,824 netMm10,827 netMm10,855 netMm10,1045 netMm10,1069 netMm10,1085 netRn6,77 netRn6,146 netRn6,198 netRn6,454 netRn6,464 netRn6,468 netRn6,535 netRn6,552 netRn6,555 netRn6,621 netRn6,626 netRn6,631 netRn6,635 netRn6,646 netRn6,678 netRn6,797 netRn6,811 netRn6,817 netRn6,823 netRn6,827 netRn6,830 netRn6,858 netRn6,1048 netRn6,1072 netRn6,1088 refGene,272 refGene,291 refGene,362 refGene,405 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 sgpGene,63 simpleRepeat,79 snp148,41 snp148,102 snp148,188 snp148,205 snp148,215 snp148,282 snp148,299 snp148,359 snp148,418 snp148,463 snp148,489 snp148,508 snp148,526 snp148,537 snp148,543 snp148,549 snp148,555 snp148,561 snp148,565 snp148,574 snp148,583 snp148,589 snp148,595 snp148,602 snp148,620 snp148,626 snp148,631 snp148,639 snp148,663 snp148,668 snp148,685 snp148,693 snp148,712 snp148,723 snp148,734 snp148,754 snp148,829 snp148,836 snp148,855 snp148,967 snp148,1028 snp148,1263 snp148,1347 snp148,1353 snp148,1374 snp148,1380 snp148,1575 snp148,1639 snp148,1649 snp148,1700 snp148,1823 snp148,1834 snp148,1980 snp148,2018 snp148Mult,24 snp148Mult,71 snp148Mult,128 snp148Mult,209 snp148Mult,226 snp148Mult,236 snp148Mult,303 snp148Mult,320 snp148Mult,380 snp148Mult,439 snp148Mult,484 snp148Mult,510 snp148Mult,529 snp148Mult,547 snp148Mult,558 snp148Mult,564 snp148Mult,570 snp148Mult,576 snp148Mult,582 snp148Mult,586 snp148Mult,595 snp148Mult,604 snp148Mult,610 snp148Mult,616 snp148Mult,623 snp148Mult,641 snp148Mult,647 snp148Mult,652 snp148Mult,660 snp148Mult,684 snp148Mult,689 snp148Mult,706 snp148Mult,714 snp148Mult,733 snp148Mult,744 snp148Mult,755 snp148Mult,775 snp148Mult,850 snp148Mult,857 snp148Mult,876 snp148Mult,988 snp148Mult,1049 snp148Mult,1284 snp148Mult,1368 snp148Mult,1374 snp148Mult,1395 snp148Mult,1401 snp148Mult,1596 snp148Mult,1660 snp148Mult,1670 snp148Mult,1721 snp148Mult,1844 snp148Mult,1855 snp148Mult,2001 snp148Mult,2039 transMapEnsemblV5,84 transMapEnsemblV5,116 transMapEnsemblV5,206 transMapEnsemblV5,319 transMapEnsemblV5,354 transMapEnsemblV5,398 transMapEnsemblV5,424 transMapEnsemblV5,477 transMapEnsemblV5,547 transMapEnsemblV5,626 transMapEnsemblV5,654 transMapEnsemblV5,713 transMapEstV5,53 transMapEstV5,85 transMapEstV5,175 transMapEstV5,288 transMapEstV5,323 transMapEstV5,367 transMapEstV5,393 transMapEstV5,446 transMapEstV5,516 transMapEstV5,595 transMapEstV5,623 transMapEstV5,682 transMapRefSeqV5,53 transMapRefSeqV5,85 transMapRefSeqV5,175 transMapRefSeqV5,288 transMapRefSeqV5,323 transMapRefSeqV5,367 transMapRefSeqV5,393 transMapRefSeqV5,446 transMapRefSeqV5,516 transMapRefSeqV5,595 transMapRefSeqV5,623 transMapRefSeqV5,682 transMapRnaV5,53 transMapRnaV5,85 transMapRnaV5,175 transMapRnaV5,288 transMapRnaV5,323 transMapRnaV5,367 transMapRnaV5,393 transMapRnaV5,446 transMapRnaV5,516 transMapRnaV5,595 transMapRnaV5,623 transMapRnaV5,682 transMapV5,54 transMapV5,191 transMapV5,281 transMapV5,394 transMapV5,429 transMapV5,473 transMapV5,499 transMapV5,552 transMapV5,622 transMapV5,701 transMapV5,729 transMapV5,788 windowmaskerSdust,91 xenoRefGene,238 xenoRefGene,257 xenoRefGene,327 xenoRefGene,370 a.k.a snp148,1683 snp148Mult,1704 a88-111-31-128 chainEquCab2,668 chainNetEquCab2,671 netEquCab2,668 a91-114-31-123 chainHg38,668 chainMm10,668 chainNetHg38,671 chainNetMm10,671 chainNetRn6,674 chainRn6,671 netHg38,668 netMm10,668 netRn6,671 aa windowmaskerSdust,97 ab augustusGene,3 augustusGene,17 abbreviated chainEquCab2,581 chainHg38,581 chainMm10,581 chainNetEquCab2,584 chainNetHg38,584 chainNetMm10,584 chainNetRn6,587 chainRn6,584 netEquCab2,581 netHg38,581 netMm10,581 netRn6,584 about chainEquCab2,457 chainEquCab2,470 chainEquCab2,844 chainHg38,457 chainHg38,470 chainHg38,844 chainMm10,457 chainMm10,470 chainMm10,844 chainNetEquCab2,460 chainNetEquCab2,473 chainNetEquCab2,847 chainNetHg38,460 chainNetHg38,473 chainNetHg38,847 chainNetMm10,460 chainNetMm10,473 chainNetMm10,847 chainNetRn6,463 chainNetRn6,476 chainNetRn6,850 chainRn6,460 chainRn6,473 chainRn6,847 est,32 est,412 gap,36 genscan,128 gold,38 intronEst,44 intronEst,493 microsat,98 mrna,349 netEquCab2,457 netEquCab2,470 netEquCab2,844 netHg38,457 netHg38,470 netHg38,844 netMm10,457 netMm10,470 netMm10,844 netRn6,460 netRn6,473 netRn6,847 refGene,211 simpleRepeat,59 snp148,17 snp148Mult,23 transMapEnsemblV5,133 transMapEstV5,102 transMapRefSeqV5,102 transMapRnaV5,102 transMapV5,208 xenoRefGene,177 above chainEquCab2,529 chainEquCab2,541 chainEquCab2,561 chainHg38,529 chainHg38,541 chainHg38,561 chainMm10,529 chainMm10,541 chainMm10,561 chainNetEquCab2,532 chainNetEquCab2,544 chainNetEquCab2,564 chainNetHg38,532 chainNetHg38,544 chainNetHg38,564 chainNetMm10,532 chainNetMm10,544 chainNetMm10,564 chainNetRn6,535 chainNetRn6,547 chainNetRn6,567 chainRn6,532 chainRn6,544 chainRn6,564 nestedRepeats,218 netEquCab2,529 netEquCab2,541 netEquCab2,561 netHg38,529 netHg38,541 netHg38,561 netMm10,529 netMm10,541 netMm10,561 netRn6,532 netRn6,544 netRn6,564 abundance chainEquCab2,178 chainHg38,178 chainMm10,178 chainNetEquCab2,181 chainNetHg38,181 chainNetMm10,181 chainNetRn6,183 chainRn6,180 netEquCab2,178 netHg38,178 netMm10,178 netRn6,180 acad chainEquCab2,1065 chainHg38,1065 chainMm10,1065 chainNetEquCab2,1068 chainNetHg38,1068 chainNetMm10,1068 chainNetRn6,1071 chainRn6,1068 netEquCab2,1065 netHg38,1065 netMm10,1065 netRn6,1068 acc ucscToRefSeq,2 acceptor genscan,33 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 snp148,1919 snp148,2192 snp148,2245 snp148Mult,1940 snp148Mult,2213 snp148Mult,2266 transMapEnsemblV5,517 transMapEnsemblV5,576 transMapEstV5,486 transMapEstV5,545 transMapRefSeqV5,486 transMapRefSeqV5,545 transMapRnaV5,486 transMapRnaV5,545 transMapV5,592 transMapV5,651 accessed transMapEnsemblV5,526 transMapEstV5,495 transMapRefSeqV5,495 transMapRnaV5,495 transMapV5,601 accessing transMapEnsemblV5,569 transMapEstV5,538 transMapRefSeqV5,538 transMapRnaV5,538 transMapV5,644 accession refGene,151 refGene,163 ucscToINSDC,2 ucscToINSDC,24 ucscToRefSeq,4 ucscToRefSeq,19 xenoRefGene,117 xenoRefGene,129 accession.version-srcuniq.destuniq transMapEnsemblV5,420 transMapEstV5,389 transMapRefSeqV5,389 transMapRnaV5,389 transMapV5,495 accessions transMapEnsemblV5,392 transMapEstV5,361 transMapRefSeqV5,361 transMapRnaV5,361 transMapV5,467 according augustusGene,115 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 snp148,238 snp148Mult,259 acgt chainEquCab2,667 chainHg38,667 chainMm10,667 chainNetEquCab2,670 chainNetHg38,670 chainNetMm10,670 chainNetRn6,673 chainRn6,670 netEquCab2,667 netHg38,667 netMm10,667 netRn6,670 acid snp148,521 snp148,634 snp148Mult,542 snp148Mult,655 acids est,760 est,785 intronEst,844 intronEst,869 microsat,126 mrna,477 mrna,502 refGene,383 refGene,416 simpleRepeat,86 snp148,2273 snp148Mult,2294 xenoRefGene,348 xenoRefGene,381 added chainEquCab2,591 chainHg38,591 chainMm10,591 chainNetEquCab2,594 chainNetHg38,594 chainNetMm10,594 chainNetRn6,597 chainRn6,594 nestedRepeats,147 netEquCab2,591 netHg38,591 netMm10,591 netRn6,594 transMapEnsemblV5,426 transMapEnsemblV5,436 transMapEstV5,395 transMapEstV5,405 transMapRefSeqV5,395 transMapRefSeqV5,405 transMapRnaV5,395 transMapRnaV5,405 transMapV5,501 transMapV5,511 additional nestedRepeats,288 rmsk,295 additions refGene,54 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 advice chainEquCab2,930 chainEquCab2,962 chainHg38,930 chainHg38,962 chainMm10,930 chainMm10,962 chainNetEquCab2,933 chainNetEquCab2,965 chainNetHg38,933 chainNetHg38,965 chainNetMm10,933 chainNetMm10,965 chainNetRn6,936 chainNetRn6,968 chainRn6,933 chainRn6,965 netEquCab2,930 netEquCab2,962 netHg38,930 netHg38,962 netMm10,930 netMm10,962 netRn6,933 netRn6,965 af nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 affine chainEquCab2,85 chainHg38,85 chainMm10,85 chainNetEquCab2,88 chainNetHg38,88 chainNetMm10,88 chainNetRn6,90 chainRn6,87 netEquCab2,85 netHg38,85 netMm10,85 netRn6,87 after chainEquCab2,902 chainHg38,902 chainMm10,902 chainNetEquCab2,905 chainNetHg38,905 chainNetMm10,905 chainNetRn6,908 chainRn6,905 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netEquCab2,902 netHg38,902 netMm10,902 netRn6,905 ag intronEst,90 again transMapEnsemblV5,408 transMapEstV5,377 transMapRefSeqV5,377 transMapRnaV5,377 transMapV5,483 against est,650 intronEst,36 intronEst,731 mrna,342 mrna,390 refGene,255 sgpGene,80 transMapEnsemblV5,126 transMapEstV5,95 transMapRefSeqV5,95 transMapRnaV5,95 transMapV5,201 xenoRefGene,221 agarwala windowmaskerSdust,98 agp gap,50 gap,59 gap,66 gold,49 gold,58 gold,65 agrees snp148,1785 snp148Mult,1806 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 al cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 refGene,374 transMapEnsemblV5,734 transMapEstV5,703 transMapRefSeqV5,703 transMapRnaV5,703 transMapV5,809 xenoRefGene,339 algorithm augustusGene,131 transMapEnsemblV5,29 transMapEstV5,27 transMapRefSeqV5,27 transMapRnaV5,27 transMapV5,26 align chainEquCab2,194 chainHg38,194 chainMm10,194 chainNetEquCab2,197 chainNetHg38,197 chainNetMm10,197 chainNetRn6,199 chainRn6,196 est,680 intronEst,761 netEquCab2,194 netHg38,194 netMm10,194 netRn6,196 snp148,956 snp148Mult,977 alignable chainEquCab2,22 chainEquCab2,38 chainHg38,22 chainHg38,38 chainMm10,22 chainMm10,38 chainNetEquCab2,25 chainNetEquCab2,41 chainNetHg38,25 chainNetHg38,41 chainNetMm10,25 chainNetMm10,41 chainNetRn6,26 chainNetRn6,42 chainRn6,23 chainRn6,39 netEquCab2,22 netEquCab2,38 netHg38,22 netHg38,38 netMm10,22 netMm10,38 netRn6,23 netRn6,39 aligned chainEquCab2,584 chainHg38,584 chainMm10,584 chainNetEquCab2,587 chainNetHg38,587 chainNetMm10,587 chainNetRn6,590 chainRn6,587 est,649 est,685 intronEst,35 intronEst,153 intronEst,730 intronEst,766 mrna,389 mrna,401 netEquCab2,584 netHg38,584 netMm10,584 netRn6,587 refGene,254 refGene,275 transMapV5,117 xenoRefGene,220 xenoRefGene,241 aligning chainEquCab2,133 chainEquCab2,329 chainEquCab2,359 chainHg38,133 chainHg38,329 chainHg38,359 chainMm10,133 chainMm10,329 chainMm10,359 chainNetEquCab2,136 chainNetEquCab2,332 chainNetEquCab2,362 chainNetHg38,136 chainNetHg38,332 chainNetHg38,362 chainNetMm10,136 chainNetMm10,332 chainNetMm10,362 chainNetRn6,138 chainNetRn6,335 chainNetRn6,365 chainRn6,135 chainRn6,332 chainRn6,362 est,398 intronEst,479 netEquCab2,133 netEquCab2,329 netEquCab2,359 netHg38,133 netHg38,329 netHg38,359 netMm10,133 netMm10,329 netMm10,359 netRn6,135 netRn6,332 netRn6,362 snp148,1899 snp148Mult,1920 alignment chainEquCab2,257 chainEquCab2,1012 chainHg38,257 chainHg38,1012 chainMm10,257 chainMm10,1012 chainNetEquCab2,260 chainNetEquCab2,1015 chainNetHg38,260 chainNetHg38,1015 chainNetMm10,260 chainNetMm10,1015 chainNetRn6,262 chainNetRn6,1018 chainRn6,259 chainRn6,1015 est,56 est,421 est,427 est,439 est,690 est,803 intronEst,77 intronEst,140 intronEst,502 intronEst,508 intronEst,520 intronEst,771 intronEst,887 mrna,37 mrna,360 mrna,366 mrna,378 mrna,406 mrna,520 netEquCab2,8 netEquCab2,257 netEquCab2,1012 netHg38,8 netHg38,257 netHg38,1012 netMm10,8 netMm10,257 netMm10,1012 netRn6,9 netRn6,259 netRn6,1015 refGene,264 refGene,280 refGene,340 snp148,921 snp148,1543 snp148,2093 snp148Mult,942 snp148Mult,1564 snp148Mult,2114 transMapEnsemblV5,28 transMapEnsemblV5,80 transMapEnsemblV5,104 transMapEnsemblV5,141 transMapEnsemblV5,197 transMapEnsemblV5,210 transMapEnsemblV5,388 transMapEnsemblV5,431 transMapEstV5,26 transMapEstV5,49 transMapEstV5,73 transMapEstV5,110 transMapEstV5,166 transMapEstV5,179 transMapEstV5,357 transMapEstV5,400 transMapRefSeqV5,26 transMapRefSeqV5,49 transMapRefSeqV5,73 transMapRefSeqV5,110 transMapRefSeqV5,166 transMapRefSeqV5,179 transMapRefSeqV5,357 transMapRefSeqV5,400 transMapRnaV5,26 transMapRnaV5,49 transMapRnaV5,73 transMapRnaV5,110 transMapRnaV5,166 transMapRnaV5,179 transMapRnaV5,357 transMapRnaV5,400 transMapV5,25 transMapV5,50 transMapV5,179 transMapV5,216 transMapV5,272 transMapV5,285 transMapV5,463 transMapV5,506 xenoRefGene,230 xenoRefGene,246 xenoRefGene,305 alignments augustusGene,301 chainEquCab2,9 chainEquCab2,63 chainEquCab2,444 chainEquCab2,596 chainEquCab2,608 chainEquCab2,616 chainEquCab2,642 chainEquCab2,760 chainEquCab2,1032 chainEquCab2,1097 chainHg38,9 chainHg38,63 chainHg38,444 chainHg38,596 chainHg38,608 chainHg38,616 chainHg38,642 chainHg38,760 chainHg38,1032 chainHg38,1097 chainMm10,9 chainMm10,63 chainMm10,444 chainMm10,596 chainMm10,608 chainMm10,616 chainMm10,642 chainMm10,760 chainMm10,1032 chainMm10,1097 chainNetEquCab2,12 chainNetEquCab2,66 chainNetEquCab2,447 chainNetEquCab2,599 chainNetEquCab2,611 chainNetEquCab2,619 chainNetEquCab2,645 chainNetEquCab2,763 chainNetEquCab2,1035 chainNetEquCab2,1100 chainNetEquCab2Viewchain,10 chainNetEquCab2Viewnet,10 chainNetHg38,12 chainNetHg38,66 chainNetHg38,447 chainNetHg38,599 chainNetHg38,611 chainNetHg38,619 chainNetHg38,645 chainNetHg38,763 chainNetHg38,1035 chainNetHg38,1100 chainNetHg38Viewchain,10 chainNetHg38Viewnet,10 chainNetMm10,12 chainNetMm10,66 chainNetMm10,447 chainNetMm10,599 chainNetMm10,611 chainNetMm10,619 chainNetMm10,645 chainNetMm10,763 chainNetMm10,1035 chainNetMm10,1100 chainNetMm10Viewchain,10 chainNetMm10Viewnet,10 chainNetRn6,13 chainNetRn6,67 chainNetRn6,450 chainNetRn6,602 chainNetRn6,614 chainNetRn6,622 chainNetRn6,648 chainNetRn6,766 chainNetRn6,1038 chainNetRn6,1103 chainNetRn6Viewchain,11 chainNetRn6Viewnet,11 chainRn6,10 chainRn6,64 chainRn6,447 chainRn6,599 chainRn6,611 chainRn6,619 chainRn6,645 chainRn6,763 chainRn6,1035 chainRn6,1100 est,15 est,699 intronEst,17 intronEst,780 mrna,16 mrna,415 netEquCab2,63 netEquCab2,444 netEquCab2,596 netEquCab2,608 netEquCab2,616 netEquCab2,642 netEquCab2,760 netEquCab2,1032 netEquCab2,1097 netHg38,63 netHg38,444 netHg38,596 netHg38,608 netHg38,616 netHg38,642 netHg38,760 netHg38,1032 netHg38,1097 netMm10,63 netMm10,444 netMm10,596 netMm10,608 netMm10,616 netMm10,642 netMm10,760 netMm10,1032 netMm10,1097 netRn6,64 netRn6,447 netRn6,599 netRn6,611 netRn6,619 netRn6,645 netRn6,763 netRn6,1035 netRn6,1100 refGene,289 rmsk,306 snp148,1563 snp148,1922 snp148,1949 snp148,1955 snp148Mult,1584 snp148Mult,1943 snp148Mult,1970 snp148Mult,1976 transMapEnsemblV5,22 transMapEnsemblV5,73 transMapEnsemblV5,155 transMapEnsemblV5,168 transMapEnsemblV5,326 transMapEnsemblV5,338 transMapEnsemblV5,348 transMapEnsemblV5,371 transMapEnsemblV5,442 transMapEnsemblV5,454 transMapEnsemblV5,769 transMapEstV5,20 transMapEstV5,42 transMapEstV5,124 transMapEstV5,137 transMapEstV5,295 transMapEstV5,307 transMapEstV5,317 transMapEstV5,340 transMapEstV5,411 transMapEstV5,423 transMapEstV5,738 transMapRefSeqV5,20 transMapRefSeqV5,42 transMapRefSeqV5,124 transMapRefSeqV5,137 transMapRefSeqV5,295 transMapRefSeqV5,307 transMapRefSeqV5,317 transMapRefSeqV5,340 transMapRefSeqV5,411 transMapRefSeqV5,423 transMapRefSeqV5,738 transMapRnaV5,20 transMapRnaV5,42 transMapRnaV5,124 transMapRnaV5,137 transMapRnaV5,295 transMapRnaV5,307 transMapRnaV5,317 transMapRnaV5,340 transMapRnaV5,411 transMapRnaV5,423 transMapRnaV5,738 transMapV5,4 transMapV5,19 transMapV5,41 transMapV5,68 transMapV5,86 transMapV5,128 transMapV5,141 transMapV5,230 transMapV5,243 transMapV5,401 transMapV5,413 transMapV5,423 transMapV5,446 transMapV5,517 transMapV5,529 transMapV5,844 xenoRefGene,255 aligns transMapV5,163 all augustusGene,208 chainEquCab2,615 chainHg38,615 chainMm10,615 chainNetEquCab2,618 chainNetHg38,618 chainNetMm10,618 chainNetRn6,621 chainRn6,618 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 est,190 est,244 est,299 est,394 est,486 gap,134 intronEst,119 intronEst,271 intronEst,325 intronEst,380 intronEst,475 intronEst,567 mrna,136 mrna,190 mrna,245 nestedRepeats,138 nestedRepeats,170 netEquCab2,615 netHg38,615 netMm10,615 netRn6,618 rmsk,65 snp148,1 snp148,251 snp148,335 snp148,1154 snp148,1180 snp148,1417 snp148,1427 snp148,1588 snp148,1687 snp148,1763 snp148,1860 snp148,1877 snp148Mult,152 snp148Mult,272 snp148Mult,356 snp148Mult,1175 snp148Mult,1201 snp148Mult,1438 snp148Mult,1448 snp148Mult,1609 snp148Mult,1708 snp148Mult,1784 snp148Mult,1881 snp148Mult,1898 transMapEnsemblV5,191 transMapEstV5,160 transMapRefSeqV5,160 transMapRnaV5,160 transMapV5,266 allele snp148,271 snp148,278 snp148,293 snp148,875 snp148,886 snp148,1024 snp148,1037 snp148,1056 snp148,1071 snp148,1077 snp148,1098 snp148,1106 snp148,1120 snp148,1129 snp148,1141 snp148,1152 snp148,1401 snp148,1420 snp148,1468 snp148,1484 snp148,1660 snp148,1845 snp148,1856 snp148,1873 snp148,2082 snp148,2137 snp148,2143 snp148Mult,292 snp148Mult,299 snp148Mult,314 snp148Mult,896 snp148Mult,907 snp148Mult,1045 snp148Mult,1058 snp148Mult,1077 snp148Mult,1092 snp148Mult,1098 snp148Mult,1119 snp148Mult,1127 snp148Mult,1141 snp148Mult,1150 snp148Mult,1162 snp148Mult,1173 snp148Mult,1422 snp148Mult,1441 snp148Mult,1489 snp148Mult,1505 snp148Mult,1681 snp148Mult,1866 snp148Mult,1877 snp148Mult,1894 snp148Mult,2103 snp148Mult,2158 snp148Mult,2164 allele.bcp.gz snp148,2135 snp148Mult,2156 allelefreqsumnot1 snp148,874 snp148Mult,895 allelefrequencies snp148,1654 snp148Mult,1675 alleles snp148,246 snp148,253 snp148,263 snp148,333 snp148,1156 snp148,1182 snp148,1448 snp148,1464 snp148,1498 snp148,1852 snp148,1863 snp148,1880 snp148Mult,267 snp148Mult,274 snp148Mult,284 snp148Mult,354 snp148Mult,1177 snp148Mult,1203 snp148Mult,1469 snp148Mult,1485 snp148Mult,1519 snp148Mult,1873 snp148Mult,1884 snp148Mult,1901 allowed est,661 intronEst,742 allows augustusGene,169 chainEquCab2,80 chainHg38,80 chainMm10,80 chainNetEquCab2,83 chainNetHg38,83 chainNetMm10,83 chainNetRn6,85 chainRn6,82 est,389 intronEst,470 mrna,335 netEquCab2,80 netHg38,80 netMm10,80 netRn6,82 refGene,182 transMapEnsemblV5,119 transMapEnsemblV5,288 transMapEstV5,88 transMapEstV5,257 transMapRefSeqV5,88 transMapRefSeqV5,257 transMapRnaV5,88 transMapRnaV5,257 transMapV5,194 transMapV5,363 xenoRefGene,148 alone augustusGene,34 along geneid,81 transMapEnsemblV5,182 transMapEstV5,151 transMapRefSeqV5,151 transMapRnaV5,151 transMapV5,257 already chainEquCab2,805 chainHg38,805 chainMm10,805 chainNetEquCab2,808 chainNetHg38,808 chainNetMm10,808 chainNetRn6,811 chainRn6,808 netEquCab2,805 netHg38,805 netMm10,805 netRn6,808 also chainEquCab2,91 chainHg38,91 chainMm10,91 chainNetEquCab2,94 chainNetHg38,94 chainNetMm10,94 chainNetRn6,96 chainRn6,93 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 est,271 est,379 est,430 est,599 gap,32 gold,34 intronEst,352 intronEst,460 intronEst,511 intronEst,680 mrna,217 mrna,325 mrna,369 netEquCab2,91 netHg38,91 netMm10,91 netRn6,93 snp148,2146 snp148Mult,2167 transMapEnsemblV5,109 transMapEnsemblV5,144 transMapEnsemblV5,646 transMapEstV5,78 transMapEstV5,113 transMapEstV5,615 transMapRefSeqV5,78 transMapRefSeqV5,113 transMapRefSeqV5,615 transMapRnaV5,78 transMapRnaV5,113 transMapRnaV5,615 transMapV5,184 transMapV5,219 transMapV5,721 alter est,127 intronEst,208 mrna,73 snp148,702 snp148Mult,723 alternating gold,90 alternative augustusGene,123 alternatives-from-sampling augustusGene,132 although snp148,1642 snp148Mult,1663 alu snp148,307 snp148Mult,328 alus rmsk,160 always gold,121 ambiguous snp148,1062 snp148Mult,1083 amino snp148,520 snp148,633 snp148Mult,541 snp148Mult,654 amount rmsk,215 amsterdam genscan,202 an chainEquCab2,151 chainEquCab2,177 chainEquCab2,183 chainHg38,151 chainHg38,177 chainHg38,183 chainMm10,151 chainMm10,177 chainMm10,183 chainNetEquCab2,154 chainNetEquCab2,180 chainNetEquCab2,186 chainNetHg38,154 chainNetHg38,180 chainNetHg38,186 chainNetMm10,154 chainNetMm10,180 chainNetMm10,186 chainNetRn6,156 chainNetRn6,182 chainNetRn6,188 chainRn6,153 chainRn6,179 chainRn6,185 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 est,448 est,495 est,578 gc5BaseBw,66 intronEst,60 intronEst,529 intronEst,576 intronEst,659 nestedRepeats,196 nestedRepeats,347 netEquCab2,151 netEquCab2,177 netEquCab2,183 netHg38,151 netHg38,177 netHg38,183 netMm10,151 netMm10,177 netMm10,183 netRn6,153 netRn6,179 netRn6,185 refGene,176 refGene,263 refGene,376 rmsk,370 sgpGene,92 snp148,313 snp148,348 snp148,531 snp148,656 snp148,748 snp148,768 snp148,993 snp148,1060 snp148,1483 snp148,1799 snp148,1964 snp148Mult,334 snp148Mult,369 snp148Mult,552 snp148Mult,677 snp148Mult,769 snp148Mult,789 snp148Mult,1014 snp148Mult,1081 snp148Mult,1504 snp148Mult,1820 snp148Mult,1985 xenoRefGene,142 xenoRefGene,229 xenoRefGene,341 analysis snp148,2212 snp148Mult,2233 transMapEnsemblV5,538 transMapEstV5,507 transMapRefSeqV5,507 transMapRnaV5,507 transMapV5,613 analyze microsat,122 simpleRepeat,82 and augustusGene,9 augustusGene,61 augustusGene,75 augustusGene,88 augustusGene,207 augustusGene,272 augustusGene,278 augustusGene,297 augustusGene,328 chainEquCab2,97 chainEquCab2,111 chainEquCab2,225 chainEquCab2,233 chainEquCab2,247 chainEquCab2,285 chainEquCab2,307 chainEquCab2,433 chainEquCab2,587 chainEquCab2,622 chainEquCab2,630 chainEquCab2,771 chainEquCab2,849 chainEquCab2,881 chainEquCab2,892 chainEquCab2,901 chainEquCab2,926 chainEquCab2,941 chainEquCab2,966 chainEquCab2,972 chainEquCab2,978 chainEquCab2,985 chainEquCab2,991 chainEquCab2,1055 chainEquCab2,1060 chainHg38,97 chainHg38,111 chainHg38,225 chainHg38,233 chainHg38,247 chainHg38,285 chainHg38,307 chainHg38,433 chainHg38,587 chainHg38,622 chainHg38,630 chainHg38,771 chainHg38,849 chainHg38,881 chainHg38,892 chainHg38,901 chainHg38,926 chainHg38,941 chainHg38,966 chainHg38,972 chainHg38,978 chainHg38,985 chainHg38,991 chainHg38,1055 chainHg38,1060 chainMm10,97 chainMm10,111 chainMm10,225 chainMm10,233 chainMm10,247 chainMm10,285 chainMm10,307 chainMm10,433 chainMm10,587 chainMm10,622 chainMm10,630 chainMm10,771 chainMm10,849 chainMm10,881 chainMm10,892 chainMm10,901 chainMm10,926 chainMm10,941 chainMm10,966 chainMm10,972 chainMm10,978 chainMm10,985 chainMm10,991 chainMm10,1055 chainMm10,1060 chainNetEquCab2,10 chainNetEquCab2,100 chainNetEquCab2,114 chainNetEquCab2,228 chainNetEquCab2,236 chainNetEquCab2,250 chainNetEquCab2,288 chainNetEquCab2,310 chainNetEquCab2,436 chainNetEquCab2,590 chainNetEquCab2,625 chainNetEquCab2,633 chainNetEquCab2,774 chainNetEquCab2,852 chainNetEquCab2,884 chainNetEquCab2,895 chainNetEquCab2,904 chainNetEquCab2,929 chainNetEquCab2,944 chainNetEquCab2,969 chainNetEquCab2,975 chainNetEquCab2,981 chainNetEquCab2,988 chainNetEquCab2,994 chainNetEquCab2,1058 chainNetEquCab2,1063 chainNetEquCab2Viewchain,8 chainNetEquCab2Viewnet,8 chainNetHg38,10 chainNetHg38,100 chainNetHg38,114 chainNetHg38,228 chainNetHg38,236 chainNetHg38,250 chainNetHg38,288 chainNetHg38,310 chainNetHg38,436 chainNetHg38,590 chainNetHg38,625 chainNetHg38,633 chainNetHg38,774 chainNetHg38,852 chainNetHg38,884 chainNetHg38,895 chainNetHg38,904 chainNetHg38,929 chainNetHg38,944 chainNetHg38,969 chainNetHg38,975 chainNetHg38,981 chainNetHg38,988 chainNetHg38,994 chainNetHg38,1058 chainNetHg38,1063 chainNetHg38Viewchain,8 chainNetHg38Viewnet,8 chainNetMm10,10 chainNetMm10,100 chainNetMm10,114 chainNetMm10,228 chainNetMm10,236 chainNetMm10,250 chainNetMm10,288 chainNetMm10,310 chainNetMm10,436 chainNetMm10,590 chainNetMm10,625 chainNetMm10,633 chainNetMm10,774 chainNetMm10,852 chainNetMm10,884 chainNetMm10,895 chainNetMm10,904 chainNetMm10,929 chainNetMm10,944 chainNetMm10,969 chainNetMm10,975 chainNetMm10,981 chainNetMm10,988 chainNetMm10,994 chainNetMm10,1058 chainNetMm10,1063 chainNetMm10Viewchain,8 chainNetMm10Viewnet,8 chainNetRn6,11 chainNetRn6,102 chainNetRn6,116 chainNetRn6,230 chainNetRn6,238 chainNetRn6,252 chainNetRn6,290 chainNetRn6,313 chainNetRn6,439 chainNetRn6,593 chainNetRn6,628 chainNetRn6,636 chainNetRn6,777 chainNetRn6,855 chainNetRn6,887 chainNetRn6,898 chainNetRn6,907 chainNetRn6,932 chainNetRn6,947 chainNetRn6,972 chainNetRn6,978 chainNetRn6,984 chainNetRn6,991 chainNetRn6,997 chainNetRn6,1061 chainNetRn6,1066 chainNetRn6Viewchain,9 chainNetRn6Viewnet,9 chainRn6,99 chainRn6,113 chainRn6,227 chainRn6,235 chainRn6,249 chainRn6,287 chainRn6,310 chainRn6,436 chainRn6,590 chainRn6,625 chainRn6,633 chainRn6,774 chainRn6,852 chainRn6,884 chainRn6,895 chainRn6,904 chainRn6,929 chainRn6,944 chainRn6,969 chainRn6,975 chainRn6,981 chainRn6,988 chainRn6,994 chainRn6,1058 chainRn6,1063 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 cytoBandIdeo,8 est,8 est,24 est,46 est,86 est,130 est,291 est,455 est,469 est,477 est,605 est,710 gap,5 gap,81 gap,103 gc5BaseBw,9 gc5BaseBw,23 gc5BaseBw,75 geneid,7 geneid,74 geneid,79 genscan,7 genscan,31 genscan,41 genscan,47 genscan,64 genscan,84 genscan,98 genscan,109 genscan,120 genscan,139 genscan,148 gold,6 gold,92 gold,106 gold,112 intronEst,10 intronEst,26 intronEst,87 intronEst,130 intronEst,167 intronEst,211 intronEst,372 intronEst,536 intronEst,550 intronEst,558 intronEst,686 intronEst,791 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,8 mrna,22 mrna,27 mrna,76 mrna,237 mrna,356 mrna,426 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netEquCab2,97 netEquCab2,111 netEquCab2,225 netEquCab2,233 netEquCab2,247 netEquCab2,285 netEquCab2,307 netEquCab2,433 netEquCab2,587 netEquCab2,622 netEquCab2,630 netEquCab2,771 netEquCab2,849 netEquCab2,881 netEquCab2,892 netEquCab2,901 netEquCab2,926 netEquCab2,941 netEquCab2,966 netEquCab2,972 netEquCab2,978 netEquCab2,985 netEquCab2,991 netEquCab2,1055 netEquCab2,1060 netHg38,97 netHg38,111 netHg38,225 netHg38,233 netHg38,247 netHg38,285 netHg38,307 netHg38,433 netHg38,587 netHg38,622 netHg38,630 netHg38,771 netHg38,849 netHg38,881 netHg38,892 netHg38,901 netHg38,926 netHg38,941 netHg38,966 netHg38,972 netHg38,978 netHg38,985 netHg38,991 netHg38,1055 netHg38,1060 netMm10,97 netMm10,111 netMm10,225 netMm10,233 netMm10,247 netMm10,285 netMm10,307 netMm10,433 netMm10,587 netMm10,622 netMm10,630 netMm10,771 netMm10,849 netMm10,881 netMm10,892 netMm10,901 netMm10,926 netMm10,941 netMm10,966 netMm10,972 netMm10,978 netMm10,985 netMm10,991 netMm10,1055 netMm10,1060 netRn6,99 netRn6,113 netRn6,227 netRn6,235 netRn6,249 netRn6,287 netRn6,310 netRn6,436 netRn6,590 netRn6,625 netRn6,633 netRn6,774 netRn6,852 netRn6,884 netRn6,895 netRn6,904 netRn6,929 netRn6,944 netRn6,969 netRn6,975 netRn6,981 netRn6,988 netRn6,994 netRn6,1058 netRn6,1063 refGene,6 refGene,19 refGene,45 refGene,55 refGene,78 refGene,112 refGene,162 refGene,187 refGene,220 refGene,233 refGene,300 refGene,327 refGene,413 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 sgpGene,11 simpleRepeat,9 simpleRepeat,42 snp148,10 snp148,21 snp148,24 snp148,142 snp148,208 snp148,232 snp148,340 snp148,444 snp148,452 snp148,455 snp148,479 snp148,614 snp148,860 snp148,1219 snp148,1256 snp148,1525 snp148,1566 snp148,1635 snp148,1662 snp148,1690 snp148,1716 snp148,1745 snp148,1814 snp148,1979 snp148,1988 snp148,1997 snp148,2012 snp148,2023 snp148,2037 snp148,2079 snp148,2088 snp148,2126 snp148,2133 snp148,2157 snp148,2188 snp148,2239 snp148Mult,16 snp148Mult,31 snp148Mult,34 snp148Mult,163 snp148Mult,229 snp148Mult,253 snp148Mult,361 snp148Mult,465 snp148Mult,473 snp148Mult,476 snp148Mult,500 snp148Mult,635 snp148Mult,881 snp148Mult,1240 snp148Mult,1277 snp148Mult,1546 snp148Mult,1587 snp148Mult,1656 snp148Mult,1683 snp148Mult,1711 snp148Mult,1737 snp148Mult,1766 snp148Mult,1835 snp148Mult,2000 snp148Mult,2009 snp148Mult,2018 snp148Mult,2033 snp148Mult,2044 snp148Mult,2058 snp148Mult,2100 snp148Mult,2109 snp148Mult,2147 snp148Mult,2154 snp148Mult,2178 snp148Mult,2209 snp148Mult,2260 transMapEnsemblV5,5 transMapEnsemblV5,11 transMapEnsemblV5,44 transMapEnsemblV5,94 transMapEnsemblV5,174 transMapEnsemblV5,199 transMapEnsemblV5,364 transMapEnsemblV5,366 transMapEnsemblV5,390 transMapEnsemblV5,407 transMapEnsemblV5,433 transMapEnsemblV5,464 transMapEnsemblV5,480 transMapEnsemblV5,495 transMapEnsemblV5,552 transMapEnsemblV5,637 transMapEnsemblV5,686 transMapEnsemblV5,700 transMapEnsemblV5,707 transMapEnsemblV5,765 transMapEstV5,9 transMapEstV5,63 transMapEstV5,143 transMapEstV5,168 transMapEstV5,333 transMapEstV5,335 transMapEstV5,359 transMapEstV5,376 transMapEstV5,402 transMapEstV5,433 transMapEstV5,449 transMapEstV5,464 transMapEstV5,521 transMapEstV5,606 transMapEstV5,655 transMapEstV5,669 transMapEstV5,676 transMapEstV5,734 transMapRefSeqV5,10 transMapRefSeqV5,63 transMapRefSeqV5,143 transMapRefSeqV5,168 transMapRefSeqV5,333 transMapRefSeqV5,335 transMapRefSeqV5,359 transMapRefSeqV5,376 transMapRefSeqV5,402 transMapRefSeqV5,433 transMapRefSeqV5,449 transMapRefSeqV5,464 transMapRefSeqV5,521 transMapRefSeqV5,606 transMapRefSeqV5,655 transMapRefSeqV5,669 transMapRefSeqV5,676 transMapRefSeqV5,734 transMapRnaV5,10 transMapRnaV5,63 transMapRnaV5,143 transMapRnaV5,168 transMapRnaV5,333 transMapRnaV5,335 transMapRnaV5,359 transMapRnaV5,376 transMapRnaV5,402 transMapRnaV5,433 transMapRnaV5,449 transMapRnaV5,464 transMapRnaV5,521 transMapRnaV5,606 transMapRnaV5,655 transMapRnaV5,669 transMapRnaV5,676 transMapRnaV5,734 transMapV5,8 transMapV5,17 transMapV5,74 transMapV5,88 transMapV5,139 transMapV5,162 transMapV5,169 transMapV5,249 transMapV5,274 transMapV5,439 transMapV5,441 transMapV5,465 transMapV5,482 transMapV5,508 transMapV5,539 transMapV5,555 transMapV5,570 transMapV5,627 transMapV5,712 transMapV5,761 transMapV5,775 transMapV5,782 transMapV5,840 ucscToINSDC,11 ucscToRefSeq,6 windowmaskerSdust,10 xenoRefGene,7 xenoRefGene,17 xenoRefGene,44 xenoRefGene,78 xenoRefGene,128 xenoRefGene,153 xenoRefGene,186 xenoRefGene,199 xenoRefGene,266 xenoRefGene,293 xenoRefGene,378 animal snp148,1310 snp148Mult,1331 animals snp148,1307 snp148Mult,1328 annotated rmsk,67 snp148,1963 snp148,1994 snp148,2163 snp148Mult,1984 snp148Mult,2015 snp148Mult,2184 annotation chainEquCab2,296 chainHg38,296 chainMm10,296 chainNetEquCab2,299 chainNetHg38,299 chainNetMm10,299 chainNetRn6,301 chainRn6,298 netEquCab2,296 netHg38,296 netMm10,296 netRn6,298 rmsk,38 snp148,976 snp148,1002 snp148,1161 snp148,1187 snp148,1334 snp148,1795 snp148,1819 snp148,2208 snp148,2215 snp148Mult,997 snp148Mult,1023 snp148Mult,1182 snp148Mult,1208 snp148Mult,1355 snp148Mult,1816 snp148Mult,1840 snp148Mult,2229 snp148Mult,2236 transMapEnsemblV5,607 transMapEstV5,576 transMapRefSeqV5,576 transMapRnaV5,576 transMapV5,682 annotations genscan,121 nestedRepeats,71 refGene,221 snp148,865 snp148Mult,886 transMapEnsemblV5,61 transMapEnsemblV5,540 transMapEnsemblV5,701 transMapEnsemblV5,709 transMapEstV5,509 transMapEstV5,670 transMapEstV5,678 transMapRefSeqV5,509 transMapRefSeqV5,670 transMapRefSeqV5,678 transMapRnaV5,509 transMapRnaV5,670 transMapRnaV5,678 transMapV5,76 transMapV5,615 transMapV5,776 transMapV5,784 xenoRefGene,187 anomalies snp148,851 snp148Mult,872 anonymous geneid,59 another snp148,1203 snp148Mult,1224 transMapV5,81 any est,314 est,548 intronEst,395 intronEst,629 mrna,260 snp148,1075 snp148,1210 snp148,1275 snp148Mult,1096 snp148Mult,1231 snp148Mult,1296 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 transMapEnsemblV5,564 transMapEstV5,533 transMapRefSeqV5,533 transMapRnaV5,533 transMapV5,639 appear snp148Mult,139 snp148Mult,149 appears snp148,1286 snp148Mult,1307 appending transMapEnsemblV5,397 transMapEstV5,366 transMapRefSeqV5,366 transMapRnaV5,366 transMapV5,472 apply est,186 intronEst,267 mrna,132 appropriate refGene,145 sgpGene,93 xenoRefGene,111 apr est,808 geneid,192 genscan,225 intronEst,892 mrna,525 refGene,345 xenoRefGene,310 apsects gc5BaseBw,52 archives snp148,2236 snp148Mult,2257 are augustusGene,28 chainEquCab2,21 chainEquCab2,40 chainEquCab2,53 chainEquCab2,140 chainEquCab2,208 chainEquCab2,219 chainEquCab2,318 chainEquCab2,387 chainEquCab2,408 chainEquCab2,415 chainEquCab2,498 chainEquCab2,687 chainHg38,21 chainHg38,40 chainHg38,53 chainHg38,140 chainHg38,208 chainHg38,219 chainHg38,318 chainHg38,387 chainHg38,408 chainHg38,415 chainHg38,498 chainHg38,687 chainMm10,21 chainMm10,40 chainMm10,53 chainMm10,140 chainMm10,208 chainMm10,219 chainMm10,318 chainMm10,387 chainMm10,408 chainMm10,415 chainMm10,498 chainMm10,687 chainNetEquCab2,24 chainNetEquCab2,43 chainNetEquCab2,56 chainNetEquCab2,143 chainNetEquCab2,211 chainNetEquCab2,222 chainNetEquCab2,321 chainNetEquCab2,390 chainNetEquCab2,411 chainNetEquCab2,418 chainNetEquCab2,501 chainNetEquCab2,690 chainNetHg38,24 chainNetHg38,43 chainNetHg38,56 chainNetHg38,143 chainNetHg38,211 chainNetHg38,222 chainNetHg38,321 chainNetHg38,390 chainNetHg38,411 chainNetHg38,418 chainNetHg38,501 chainNetHg38,690 chainNetMm10,24 chainNetMm10,43 chainNetMm10,56 chainNetMm10,143 chainNetMm10,211 chainNetMm10,222 chainNetMm10,321 chainNetMm10,390 chainNetMm10,411 chainNetMm10,418 chainNetMm10,501 chainNetMm10,690 chainNetRn6,25 chainNetRn6,44 chainNetRn6,57 chainNetRn6,145 chainNetRn6,213 chainNetRn6,224 chainNetRn6,324 chainNetRn6,393 chainNetRn6,414 chainNetRn6,421 chainNetRn6,504 chainNetRn6,693 chainRn6,22 chainRn6,41 chainRn6,54 chainRn6,142 chainRn6,210 chainRn6,221 chainRn6,321 chainRn6,390 chainRn6,411 chainRn6,418 chainRn6,501 chainRn6,690 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 est,28 est,65 est,147 est,157 gap,24 gap,69 geneid,77 geneid,91 geneid,97 genscan,26 genscan,161 gold,26 gold,84 gold,101 intronEst,40 intronEst,228 intronEst,238 intronEst,801 microsat,16 microsat,25 microsat,52 mrna,46 mrna,93 mrna,103 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netEquCab2,21 netEquCab2,40 netEquCab2,53 netEquCab2,140 netEquCab2,208 netEquCab2,219 netEquCab2,318 netEquCab2,387 netEquCab2,408 netEquCab2,415 netEquCab2,498 netEquCab2,687 netHg38,21 netHg38,40 netHg38,53 netHg38,140 netHg38,208 netHg38,219 netHg38,318 netHg38,387 netHg38,408 netHg38,415 netHg38,498 netHg38,687 netMm10,21 netMm10,40 netMm10,53 netMm10,140 netMm10,208 netMm10,219 netMm10,318 netMm10,387 netMm10,408 netMm10,415 netMm10,498 netMm10,687 netRn6,22 netRn6,41 netRn6,54 netRn6,142 netRn6,210 netRn6,221 netRn6,321 netRn6,390 netRn6,411 netRn6,418 netRn6,501 netRn6,690 refGene,36 refGene,138 refGene,236 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 snp148,49 snp148,56 snp148,134 snp148,148 snp148,185 snp148,199 snp148,212 snp148,254 snp148,334 snp148,481 snp148,785 snp148,889 snp148,1157 snp148,1183 snp148,1230 snp148,1316 snp148,1320 snp148,1559 snp148,1569 snp148,1602 snp148,1696 snp148,1756 snp148,1958 snp148,2015 snp148,2118 snp148Mult,65 snp148Mult,103 snp148Mult,169 snp148Mult,206 snp148Mult,220 snp148Mult,233 snp148Mult,275 snp148Mult,355 snp148Mult,502 snp148Mult,806 snp148Mult,910 snp148Mult,1178 snp148Mult,1204 snp148Mult,1251 snp148Mult,1337 snp148Mult,1341 snp148Mult,1580 snp148Mult,1590 snp148Mult,1623 snp148Mult,1717 snp148Mult,1777 snp148Mult,1979 snp148Mult,2036 snp148Mult,2139 transMapEnsemblV5,56 transMapEnsemblV5,74 transMapEnsemblV5,452 transMapEnsemblV5,459 transMapEnsemblV5,468 transMapEnsemblV5,502 transMapEnsemblV5,512 transMapEnsemblV5,541 transMapEnsemblV5,580 transMapEstV5,43 transMapEstV5,421 transMapEstV5,428 transMapEstV5,437 transMapEstV5,471 transMapEstV5,481 transMapEstV5,510 transMapEstV5,549 transMapRefSeqV5,43 transMapRefSeqV5,421 transMapRefSeqV5,428 transMapRefSeqV5,437 transMapRefSeqV5,471 transMapRefSeqV5,481 transMapRefSeqV5,510 transMapRefSeqV5,549 transMapRnaV5,43 transMapRnaV5,421 transMapRnaV5,428 transMapRnaV5,437 transMapRnaV5,471 transMapRnaV5,481 transMapRnaV5,510 transMapRnaV5,549 transMapV5,42 transMapV5,69 transMapV5,527 transMapV5,534 transMapV5,543 transMapV5,577 transMapV5,587 transMapV5,616 transMapV5,655 xenoRefGene,39 xenoRefGene,104 xenoRefGene,202 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5BaseBw,38 arian chainEquCab2,939 chainHg38,939 chainMm10,939 chainNetEquCab2,942 chainNetHg38,942 chainNetMm10,942 chainNetRn6,945 chainRn6,942 nestedRepeats,305 netEquCab2,939 netHg38,939 netMm10,939 netRn6,942 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrays geneid,87 arrows nestedRepeats,145 nestedRepeats,163 as augustusGene,78 augustusGene,80 chainEquCab2,460 chainEquCab2,500 chainEquCab2,523 chainEquCab2,538 chainEquCab2,798 chainEquCab2,853 chainEquCab2,911 chainHg38,460 chainHg38,500 chainHg38,523 chainHg38,538 chainHg38,798 chainHg38,853 chainHg38,911 chainMm10,460 chainMm10,500 chainMm10,523 chainMm10,538 chainMm10,798 chainMm10,853 chainMm10,911 chainNetEquCab2,463 chainNetEquCab2,503 chainNetEquCab2,526 chainNetEquCab2,541 chainNetEquCab2,801 chainNetEquCab2,856 chainNetEquCab2,914 chainNetHg38,463 chainNetHg38,503 chainNetHg38,526 chainNetHg38,541 chainNetHg38,801 chainNetHg38,856 chainNetHg38,914 chainNetMm10,463 chainNetMm10,503 chainNetMm10,526 chainNetMm10,541 chainNetMm10,801 chainNetMm10,856 chainNetMm10,914 chainNetRn6,466 chainNetRn6,506 chainNetRn6,529 chainNetRn6,544 chainNetRn6,804 chainNetRn6,859 chainNetRn6,917 chainRn6,463 chainRn6,503 chainRn6,526 chainRn6,541 chainRn6,801 chainRn6,856 chainRn6,914 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 est,595 gap,71 geneid,99 genscan,36 genscan,38 intronEst,676 microsat,21 nestedRepeats,125 netEquCab2,460 netEquCab2,500 netEquCab2,523 netEquCab2,538 netEquCab2,798 netEquCab2,853 netEquCab2,911 netHg38,460 netHg38,500 netHg38,523 netHg38,538 netHg38,798 netHg38,853 netHg38,911 netMm10,460 netMm10,500 netMm10,523 netMm10,538 netMm10,798 netMm10,853 netMm10,911 netRn6,463 netRn6,503 netRn6,526 netRn6,541 netRn6,801 netRn6,856 netRn6,914 rmsk,53 rmsk,55 snp148,150 snp148,201 snp148,298 snp148,446 snp148,1518 snp148,2167 snp148Mult,171 snp148Mult,222 snp148Mult,319 snp148Mult,467 snp148Mult,1539 snp148Mult,2188 transMapEnsemblV5,66 transMapEnsemblV5,188 transMapEnsemblV5,214 transMapEnsemblV5,226 transMapEnsemblV5,514 transMapEnsemblV5,625 transMapEstV5,157 transMapEstV5,183 transMapEstV5,195 transMapEstV5,483 transMapEstV5,594 transMapRefSeqV5,157 transMapRefSeqV5,183 transMapRefSeqV5,195 transMapRefSeqV5,483 transMapRefSeqV5,594 transMapRnaV5,157 transMapRnaV5,183 transMapRnaV5,195 transMapRnaV5,483 transMapRnaV5,594 transMapV5,263 transMapV5,289 transMapV5,301 transMapV5,589 transMapV5,700 windowmaskerSdust,18 ask refGene,58 assayed snp148,416 snp148,1412 snp148,1429 snp148,1682 snp148Mult,437 snp148Mult,1433 snp148Mult,1450 snp148Mult,1703 assembled geneid,132 geneid,141 assemblies augustusGene,197 augustusGene,238 chainEquCab2,317 chainEquCab2,579 chainHg38,317 chainHg38,579 chainMm10,317 chainMm10,579 chainNetEquCab2,320 chainNetEquCab2,582 chainNetHg38,320 chainNetHg38,582 chainNetMm10,320 chainNetMm10,582 chainNetRn6,323 chainNetRn6,585 chainRn6,320 chainRn6,582 gap,145 netEquCab2,317 netEquCab2,579 netHg38,317 netHg38,579 netMm10,317 netMm10,579 netRn6,320 netRn6,582 rmsk,107 transMapEnsemblV5,193 transMapEstV5,162 transMapRefSeqV5,162 transMapRnaV5,162 transMapV5,268 assembly augustusGene,198 chainEquCab2,149 chainEquCab2,156 chainEquCab2,304 chainHg38,149 chainHg38,156 chainHg38,304 chainMm10,149 chainMm10,156 chainMm10,304 chainNetEquCab2,152 chainNetEquCab2,159 chainNetEquCab2,307 chainNetHg38,152 chainNetHg38,159 chainNetHg38,307 chainNetMm10,152 chainNetMm10,159 chainNetMm10,307 chainNetRn6,154 chainNetRn6,161 chainNetRn6,310 chainRn6,151 chainRn6,158 chainRn6,307 gap,20 gap,22 gap,29 gap,38 gap,46 gap,117 gold,1 gold,2 gold,22 gold,24 gold,31 gold,40 gold,45 netEquCab2,149 netEquCab2,156 netEquCab2,304 netHg38,149 netHg38,156 netHg38,304 netMm10,149 netMm10,156 netMm10,304 netRn6,151 netRn6,158 netRn6,307 snp148,69 snp148,354 snp148,365 snp148,965 snp148,1466 snp148,1478 snp148,2142 snp148Mult,64 snp148Mult,375 snp148Mult,386 snp148Mult,986 snp148Mult,1487 snp148Mult,1499 snp148Mult,2163 transMapV5,106 transMapV5,124 transMapV5,135 ucscToINSDC,41 ucscToRefSeq,35 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assigned snp148,1545 snp148Mult,1566 transMapEnsemblV5,460 transMapEstV5,429 transMapRefSeqV5,429 transMapRnaV5,429 transMapV5,535 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 est,108 gc5BaseBw,35 intronEst,189 rmsk,224 simpleRepeat,51 snp148,1249 snp148,1372 snp148,1378 snp148Mult,1270 snp148Mult,1393 snp148Mult,1399 transMapEnsemblV5,581 transMapEstV5,550 transMapRefSeqV5,550 transMapRnaV5,550 transMapV5,656 associates ucscToINSDC,17 ucscToRefSeq,12 astashyn refGene,361 xenoRefGene,326 at chainEquCab2,417 chainEquCab2,793 chainEquCab2,915 chainEquCab2,950 chainEquCab2,955 chainEquCab2,996 chainHg38,417 chainHg38,793 chainHg38,915 chainHg38,950 chainHg38,955 chainHg38,996 chainMm10,417 chainMm10,793 chainMm10,915 chainMm10,950 chainMm10,955 chainMm10,996 chainNetEquCab2,420 chainNetEquCab2,796 chainNetEquCab2,918 chainNetEquCab2,953 chainNetEquCab2,958 chainNetEquCab2,999 chainNetHg38,420 chainNetHg38,796 chainNetHg38,918 chainNetHg38,953 chainNetHg38,958 chainNetHg38,999 chainNetMm10,420 chainNetMm10,796 chainNetMm10,918 chainNetMm10,953 chainNetMm10,958 chainNetMm10,999 chainNetRn6,423 chainNetRn6,799 chainNetRn6,921 chainNetRn6,956 chainNetRn6,961 chainNetRn6,1002 chainRn6,420 chainRn6,796 chainRn6,918 chainRn6,953 chainRn6,958 chainRn6,999 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 est,263 est,547 est,592 est,711 est,727 intronEst,66 intronEst,81 intronEst,106 intronEst,344 intronEst,628 intronEst,673 intronEst,792 intronEst,811 microsat,28 microsat,77 mrna,209 mrna,427 mrna,444 netEquCab2,417 netEquCab2,793 netEquCab2,915 netEquCab2,950 netEquCab2,955 netEquCab2,996 netHg38,417 netHg38,793 netHg38,915 netHg38,950 netHg38,955 netHg38,996 netMm10,417 netMm10,793 netMm10,915 netMm10,950 netMm10,955 netMm10,996 netRn6,420 netRn6,796 netRn6,918 netRn6,953 netRn6,958 netRn6,999 refGene,126 refGene,301 refGene,317 rmsk,243 rmsk,267 sgpGene,91 snp148,124 snp148,131 snp148,154 snp148,162 snp148,392 snp148,407 snp148,412 snp148,578 snp148,615 snp148,643 snp148,743 snp148,763 snp148,927 snp148,1021 snp148,1052 snp148,1258 snp148,1335 snp148,1363 snp148,1404 snp148,1408 snp148,1423 snp148,1475 snp148,1485 snp148Mult,93 snp148Mult,100 snp148Mult,175 snp148Mult,183 snp148Mult,413 snp148Mult,428 snp148Mult,433 snp148Mult,599 snp148Mult,636 snp148Mult,664 snp148Mult,764 snp148Mult,784 snp148Mult,948 snp148Mult,1042 snp148Mult,1073 snp148Mult,1279 snp148Mult,1356 snp148Mult,1384 snp148Mult,1425 snp148Mult,1429 snp148Mult,1444 snp148Mult,1496 snp148Mult,1506 transMapEnsemblV5,294 transMapEnsemblV5,682 transMapEstV5,263 transMapEstV5,651 transMapRefSeqV5,263 transMapRefSeqV5,651 transMapRnaV5,263 transMapRnaV5,651 transMapV5,118 transMapV5,369 transMapV5,757 ucscToINSDC,3 xenoRefGene,92 xenoRefGene,267 xenoRefGene,283 attempt est,579 intronEst,660 attributes snp148,241 snp148,1234 snp148Mult,262 snp148Mult,1255 augustus augustusGene,1 augustusGene,2 augustusGene,23 augustusGene,149 augustusGene,257 auml windowmaskerSdust,95 automated snp148,2211 snp148Mult,2232 transMapEnsemblV5,537 transMapEstV5,506 transMapRefSeqV5,506 transMapRnaV5,506 transMapV5,612 available augustusGene,240 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 nestedRepeats,259 nestedRepeats,276 rmsk,73 snp148,37 snp148,1688 snp148Mult,47 snp148Mult,1709 transMapEnsemblV5,189 transMapEnsemblV5,246 transMapEstV5,158 transMapEstV5,215 transMapRefSeqV5,158 transMapRefSeqV5,215 transMapRnaV5,158 transMapRnaV5,215 transMapV5,264 transMapV5,321 windowmaskerSdust,40 average nestedRepeats,186 nestedRepeats,221 snp148,1513 snp148,1523 snp148,1532 snp148Mult,1534 snp148Mult,1544 snp148Mult,1553 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainEquCab2,600 chainEquCab2,607 chainHg38,600 chainHg38,607 chainMm10,600 chainMm10,607 chainNetEquCab2,603 chainNetEquCab2,610 chainNetHg38,603 chainNetHg38,610 chainNetMm10,603 chainNetMm10,610 chainNetRn6,606 chainNetRn6,613 chainRn6,603 chainRn6,610 netEquCab2,600 netEquCab2,607 netHg38,600 netHg38,607 netMm10,600 netMm10,607 netRn6,603 netRn6,610 axtchain chainEquCab2,612 chainEquCab2,698 chainEquCab2,946 chainHg38,612 chainHg38,698 chainHg38,946 chainMm10,612 chainMm10,698 chainMm10,946 chainNetEquCab2,615 chainNetEquCab2,701 chainNetEquCab2,949 chainNetHg38,615 chainNetHg38,701 chainNetHg38,949 chainNetMm10,615 chainNetMm10,701 chainNetMm10,949 chainNetRn6,618 chainNetRn6,704 chainNetRn6,952 chainRn6,615 chainRn6,701 chainRn6,949 netEquCab2,612 netEquCab2,698 netEquCab2,946 netHg38,612 netHg38,698 netHg38,946 netMm10,612 netMm10,698 netMm10,946 netRn6,615 netRn6,701 netRn6,949 b transMapEnsemblV5,718 transMapEnsemblV5,728 transMapEstV5,687 transMapEstV5,697 transMapRefSeqV5,687 transMapRefSeqV5,697 transMapRnaV5,687 transMapRnaV5,697 transMapV5,793 transMapV5,803 b148_contiginfo.bcp.gz snp148,2089 snp148Mult,2110 b148_snpcontigloc.bcp.gz snp148,2087 snp148Mult,2108 b148_snpcontiglocusid.bcp.gz snp148,2100 snp148Mult,2121 b148_snpmapinfo.bcp.gz snp148,2090 snp148Mult,2111 back chainEquCab2,592 chainHg38,592 chainMm10,592 chainNetEquCab2,595 chainNetHg38,595 chainNetMm10,595 chainNetRn6,598 chainRn6,595 netEquCab2,592 netHg38,592 netMm10,592 netRn6,595 baertsch augustusGene,291 chainEquCab2,984 chainEquCab2,1042 chainEquCab2,1088 chainHg38,984 chainHg38,1042 chainHg38,1088 chainMm10,984 chainMm10,1042 chainMm10,1088 chainNetEquCab2,987 chainNetEquCab2,1045 chainNetEquCab2,1091 chainNetHg38,987 chainNetHg38,1045 chainNetHg38,1091 chainNetMm10,987 chainNetMm10,1045 chainNetMm10,1091 chainNetRn6,990 chainNetRn6,1048 chainNetRn6,1094 chainRn6,987 chainRn6,1045 chainRn6,1091 netEquCab2,984 netEquCab2,1042 netEquCab2,1088 netHg38,984 netHg38,1042 netHg38,1088 netMm10,984 netMm10,1042 netMm10,1088 netRn6,987 netRn6,1045 netRn6,1091 transMapEnsemblV5,759 transMapEstV5,728 transMapRefSeqV5,728 transMapRnaV5,728 transMapV5,834 baker snp148,2257 snp148Mult,2278 band cytoBandIdeo,2 barcelona geneid,47 sgpGene,56 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 est,384 est,418 est,694 est,702 est,714 intronEst,465 intronEst,499 intronEst,775 intronEst,783 intronEst,795 mrna,357 mrna,410 mrna,418 mrna,430 refGene,284 refGene,292 refGene,304 rmsk,217 rmsk,219 rmsk,222 snp148,207 snp148,581 snp148,618 snp148,646 snp148,741 snp148,761 snp148,1063 snp148,1166 snp148Mult,228 snp148Mult,602 snp148Mult,639 snp148Mult,667 snp148Mult,762 snp148Mult,782 snp148Mult,1084 snp148Mult,1187 xenoRefGene,250 xenoRefGene,258 xenoRefGene,270 base-level snp148,165 snp148Mult,186 transMapEnsemblV5,320 transMapEstV5,289 transMapRefSeqV5,289 transMapRnaV5,289 transMapV5,395 based augustusGene,29 chainEquCab2,320 chainEquCab2,346 chainHg38,320 chainHg38,346 chainMm10,320 chainMm10,346 chainNetEquCab2,323 chainNetEquCab2,349 chainNetHg38,323 chainNetHg38,349 chainNetMm10,323 chainNetMm10,349 chainNetRn6,326 chainNetRn6,352 chainRn6,323 chainRn6,349 genscan,27 netEquCab2,320 netEquCab2,346 netHg38,320 netHg38,346 netMm10,320 netMm10,346 netRn6,323 netRn6,349 snp148,1926 snp148Mult,1947 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 est,34 est,395 est,667 gap,138 gap,155 gc5BaseBw,26 intronEst,46 intronEst,84 intronEst,476 intronEst,748 snp148,222 snp148,613 snp148,979 snp148,1007 snp148,1132 snp148,1190 snp148,1224 snp148,1990 snp148,2014 snp148Mult,243 snp148Mult,634 snp148Mult,1000 snp148Mult,1028 snp148Mult,1153 snp148Mult,1211 snp148Mult,1245 snp148Mult,2011 snp148Mult,2035 transMapV5,166 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 batch.bcp.gz snp148,2155 snp148Mult,2176 bc149621.1 transMapEnsemblV5,457 transMapEstV5,426 transMapRefSeqV5,426 transMapRnaV5,426 transMapV5,532 bc149621.1-1 transMapEnsemblV5,463 transMapEnsemblV5,474 transMapEstV5,432 transMapEstV5,443 transMapRefSeqV5,432 transMapRefSeqV5,443 transMapRnaV5,432 transMapRnaV5,443 transMapV5,538 transMapV5,549 bc149621.1-1.1 transMapEnsemblV5,485 transMapEstV5,454 transMapRefSeqV5,454 transMapRnaV5,454 transMapV5,560 bc149621.1-2 transMapEnsemblV5,465 transMapEnsemblV5,487 transMapEstV5,434 transMapEstV5,456 transMapRefSeqV5,434 transMapRefSeqV5,456 transMapRnaV5,434 transMapRnaV5,456 transMapV5,540 transMapV5,562 bc149621.1-2.1 transMapEnsemblV5,494 transMapEstV5,463 transMapRefSeqV5,463 transMapRnaV5,463 transMapV5,569 bc149621.1-2.2 transMapEnsemblV5,496 transMapEstV5,465 transMapRefSeqV5,465 transMapRnaV5,465 transMapV5,571 be augustusGene,100 chainEquCab2,106 chainEquCab2,427 chainHg38,106 chainHg38,427 chainMm10,106 chainMm10,427 chainNetEquCab2,109 chainNetEquCab2,430 chainNetHg38,109 chainNetHg38,430 chainNetMm10,109 chainNetMm10,430 chainNetRn6,111 chainNetRn6,433 chainRn6,108 chainRn6,430 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 est,107 est,120 est,142 est,251 est,261 est,272 est,303 est,321 est,331 est,380 est,431 est,527 est,635 gc5BaseBw,42 intronEst,57 intronEst,80 intronEst,188 intronEst,201 intronEst,223 intronEst,332 intronEst,342 intronEst,353 intronEst,384 intronEst,402 intronEst,412 intronEst,461 intronEst,512 intronEst,608 intronEst,716 microsat,19 microsat,39 mrna,66 mrna,88 mrna,197 mrna,207 mrna,218 mrna,249 mrna,267 mrna,277 mrna,326 mrna,370 nestedRepeats,269 nestedRepeats,291 netEquCab2,106 netEquCab2,427 netHg38,106 netHg38,427 netMm10,106 netMm10,427 netRn6,108 netRn6,430 refGene,121 rmsk,278 rmsk,284 rmsk,298 sgpGene,90 simpleRepeat,44 snp148,97 snp148,230 snp148,383 snp148,609 snp148,948 snp148,990 snp148,1018 snp148,1177 snp148,1201 snp148,1389 snp148,1392 snp148,1550 snp148,2197 snp148,2217 snp148Mult,251 snp148Mult,404 snp148Mult,630 snp148Mult,969 snp148Mult,1011 snp148Mult,1039 snp148Mult,1198 snp148Mult,1222 snp148Mult,1410 snp148Mult,1413 snp148Mult,1571 snp148Mult,2218 snp148Mult,2238 transMapEnsemblV5,64 transMapEnsemblV5,110 transMapEnsemblV5,145 transMapEnsemblV5,525 transMapEnsemblV5,554 transMapEnsemblV5,609 transMapEnsemblV5,617 transMapEnsemblV5,640 transMapEnsemblV5,647 transMapEstV5,79 transMapEstV5,114 transMapEstV5,494 transMapEstV5,523 transMapEstV5,578 transMapEstV5,586 transMapEstV5,609 transMapEstV5,616 transMapRefSeqV5,79 transMapRefSeqV5,114 transMapRefSeqV5,494 transMapRefSeqV5,523 transMapRefSeqV5,578 transMapRefSeqV5,586 transMapRefSeqV5,609 transMapRefSeqV5,616 transMapRnaV5,79 transMapRnaV5,114 transMapRnaV5,494 transMapRnaV5,523 transMapRnaV5,578 transMapRnaV5,586 transMapRnaV5,609 transMapRnaV5,616 transMapV5,185 transMapV5,220 transMapV5,600 transMapV5,629 transMapV5,684 transMapV5,692 transMapV5,715 transMapV5,722 xenoRefGene,87 bears est,92 intronEst,173 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 est,627 intronEst,708 snp148,675 snp148Mult,156 snp148Mult,696 bed3 windowmaskerSdust,76 been chainEquCab2,568 chainHg38,568 chainMm10,568 chainNetEquCab2,571 chainNetHg38,571 chainNetMm10,571 chainNetRn6,574 chainRn6,571 intronEst,7 nestedRepeats,89 netEquCab2,568 netHg38,568 netMm10,568 netRn6,571 rmsk,70 rmsk,109 snp148,60 snp148,425 snp148,899 snp148,1226 snp148,1281 snp148,1437 snp148,1629 snp148Mult,55 snp148Mult,446 snp148Mult,920 snp148Mult,1247 snp148Mult,1302 snp148Mult,1458 snp148Mult,1650 before chainEquCab2,900 chainHg38,900 chainMm10,900 chainNetEquCab2,903 chainNetHg38,903 chainNetMm10,903 chainNetRn6,906 chainRn6,903 est,564 intronEst,645 netEquCab2,900 netHg38,900 netMm10,900 netRn6,903 below chainEquCab2,674 chainHg38,674 chainMm10,674 chainNetEquCab2,677 chainNetHg38,677 chainNetMm10,677 chainNetRn6,680 chainRn6,677 genscan,155 genscan,169 nestedRepeats,68 netEquCab2,674 netHg38,674 netMm10,674 netRn6,677 rmsk,104 beneath snp148,1737 snp148Mult,1758 benson est,744 est,772 intronEst,828 intronEst,856 microsat,102 microsat,112 microsat,114 mrna,461 mrna,489 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 best chainEquCab2,265 chainEquCab2,510 chainHg38,265 chainHg38,510 chainMm10,265 chainMm10,510 chainNetEquCab2,268 chainNetEquCab2,513 chainNetHg38,268 chainNetHg38,513 chainNetMm10,268 chainNetMm10,513 chainNetRn6,270 chainNetRn6,516 chainRn6,267 chainRn6,513 est,709 intronEst,790 mrna,425 netEquCab2,265 netEquCab2,510 netHg38,265 netHg38,510 netMm10,265 netMm10,510 netRn6,267 netRn6,513 refGene,299 transMapEnsemblV5,241 transMapEstV5,210 transMapRefSeqV5,210 transMapRnaV5,210 transMapV5,67 transMapV5,316 xenoRefGene,265 better est,72 mrna,53 between chainEquCab2,51 chainEquCab2,617 chainEquCab2,847 chainHg38,51 chainHg38,617 chainHg38,847 chainMm10,51 chainMm10,617 chainMm10,847 chainNetEquCab2,54 chainNetEquCab2,620 chainNetEquCab2,850 chainNetHg38,54 chainNetHg38,620 chainNetHg38,850 chainNetMm10,54 chainNetMm10,620 chainNetMm10,850 chainNetRn6,55 chainNetRn6,623 chainNetRn6,853 chainRn6,52 chainRn6,620 chainRn6,850 est,16 est,83 gap,127 gap,141 gold,98 gold,103 intronEst,18 intronEst,75 intronEst,164 mrna,17 netEquCab2,51 netEquCab2,617 netEquCab2,847 netHg38,51 netHg38,617 netHg38,847 netMm10,51 netMm10,617 netMm10,847 netRn6,52 netRn6,620 netRn6,850 snp148,193 snp148,1986 snp148Mult,214 snp148Mult,2007 bi-allelic snp148,1539 snp148Mult,1560 bigbedtobed transMapEnsemblV5,614 transMapEnsemblV5,659 transMapEstV5,583 transMapEstV5,628 transMapRefSeqV5,583 transMapRefSeqV5,628 transMapRnaV5,583 transMapRnaV5,628 transMapV5,689 transMapV5,734 bigpsl transMapEnsemblV5,544 transMapEstV5,513 transMapRefSeqV5,513 transMapRnaV5,513 transMapV5,619 binaries transMapEnsemblV5,638 transMapEstV5,607 transMapRefSeqV5,607 transMapRnaV5,607 transMapV5,713 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 transMapEnsemblV5,628 transMapEstV5,597 transMapRefSeqV5,597 transMapRnaV5,597 transMapV5,703 biocomput chainEquCab2,1035 chainHg38,1035 chainMm10,1035 chainNetEquCab2,1038 chainNetHg38,1038 chainNetMm10,1038 chainNetRn6,1041 chainRn6,1038 netEquCab2,1035 netHg38,1035 netMm10,1035 netRn6,1038 bioinformatics augustusGene,308 augustusGene,333 geneid,170 transMapEnsemblV5,776 transMapEstV5,745 transMapRefSeqV5,745 transMapRnaV5,745 transMapV5,851 windowmaskerSdust,106 biol cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 genscan,223 transMapEnsemblV5,811 transMapEstV5,780 transMapRefSeqV5,780 transMapRnaV5,780 transMapV5,886 biology geneid,28 geneid,147 genscan,201 sgpGene,36 sgpGene,105 biomedical snp148,1348 snp148Mult,1369 birds augustusGene,204 black gap,72 gap,111 blanco geneid,156 geneid,181 blast-like est,802 intronEst,886 mrna,519 refGene,339 xenoRefGene,304 blastz chainEquCab2,912 chainEquCab2,1099 chainHg38,912 chainHg38,1099 chainMm10,912 chainMm10,1099 chainNetEquCab2,915 chainNetEquCab2,1102 chainNetHg38,915 chainNetHg38,1102 chainNetMm10,915 chainNetMm10,1102 chainNetRn6,918 chainNetRn6,1105 chainRn6,915 chainRn6,1102 netEquCab2,912 netEquCab2,1099 netHg38,912 netHg38,1099 netMm10,912 netMm10,1099 netRn6,915 netRn6,1102 transMapEnsemblV5,79 transMapEnsemblV5,196 transMapEstV5,48 transMapEstV5,165 transMapRefSeqV5,48 transMapRefSeqV5,165 transMapRnaV5,48 transMapRnaV5,165 transMapV5,49 transMapV5,144 transMapV5,271 blat est,654 est,663 est,800 intronEst,735 intronEst,744 intronEst,884 mrna,395 mrna,517 refGene,260 refGene,337 transMapEnsemblV5,167 transMapEstV5,136 transMapRefSeqV5,136 transMapRnaV5,136 transMapV5,126 transMapV5,150 transMapV5,157 transMapV5,242 xenoRefGene,226 blat--the xenoRefGene,303 block snp148,216 snp148Mult,237 blocks chainEquCab2,44 chainEquCab2,639 chainEquCab2,660 chainHg38,44 chainHg38,639 chainHg38,660 chainMm10,44 chainMm10,639 chainMm10,660 chainNetEquCab2,47 chainNetEquCab2,642 chainNetEquCab2,663 chainNetHg38,47 chainNetHg38,642 chainNetHg38,663 chainNetMm10,47 chainNetMm10,642 chainNetMm10,663 chainNetRn6,48 chainNetRn6,645 chainNetRn6,666 chainRn6,45 chainRn6,642 chainRn6,663 gold,108 gold,135 intronEst,78 netEquCab2,44 netEquCab2,639 netEquCab2,660 netHg38,44 netHg38,639 netHg38,660 netMm10,44 netMm10,639 netMm10,660 netRn6,45 netRn6,642 netRn6,663 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 bostau8 snp148,2060 snp148,2074 snp148Mult,2081 snp148Mult,2095 transMapEnsemblV5,204 transMapEnsemblV5,663 transMapEstV5,173 transMapEstV5,632 transMapRefSeqV5,173 transMapRefSeqV5,632 transMapRnaV5,173 transMapRnaV5,632 transMapV5,279 transMapV5,738 bostau8.ensembl.transmapv4.bigpsl transMapEnsemblV5,591 transMapEstV5,560 transMapRefSeqV5,560 transMapRnaV5,560 bostau8.ensembl.transmapv5.bigpsl transMapV5,666 bostau8.est.transmapv4.bigpsl transMapEnsemblV5,600 transMapEstV5,569 transMapRefSeqV5,569 transMapRnaV5,569 bostau8.est.transmapv5.bigpsl transMapV5,675 bostau8.fa windowmaskerSdust,62 windowmaskerSdust,71 bostau8.refseq.transmapv4.bigpsl transMapEnsemblV5,594 transMapEnsemblV5,666 transMapEstV5,563 transMapEstV5,635 transMapRefSeqV5,563 transMapRefSeqV5,635 transMapRnaV5,563 transMapRnaV5,635 bostau8.refseq.transmapv5.bigpsl transMapV5,669 transMapV5,741 bostau8.rna.transmapv4.bigpsl transMapEnsemblV5,597 transMapEstV5,566 transMapRefSeqV5,566 transMapRnaV5,566 bostau8.rna.transmapv5.bigpsl transMapV5,672 both chainEquCab2,95 chainEquCab2,115 chainEquCab2,168 chainEquCab2,890 chainHg38,95 chainHg38,115 chainHg38,168 chainHg38,890 chainMm10,95 chainMm10,115 chainMm10,168 chainMm10,890 chainNetEquCab2,98 chainNetEquCab2,118 chainNetEquCab2,171 chainNetEquCab2,893 chainNetHg38,98 chainNetHg38,118 chainNetHg38,171 chainNetHg38,893 chainNetMm10,98 chainNetMm10,118 chainNetMm10,171 chainNetMm10,893 chainNetRn6,100 chainNetRn6,120 chainNetRn6,173 chainNetRn6,896 chainRn6,97 chainRn6,117 chainRn6,170 chainRn6,893 netEquCab2,95 netEquCab2,115 netEquCab2,168 netEquCab2,890 netHg38,95 netHg38,115 netHg38,168 netHg38,890 netMm10,95 netMm10,115 netMm10,168 netMm10,890 netRn6,97 netRn6,117 netRn6,170 netRn6,893 refGene,159 refGene,230 snp148,441 snp148Mult,462 transMapEnsemblV5,510 transMapEstV5,479 transMapRefSeqV5,479 transMapRnaV5,479 transMapV5,585 xenoRefGene,125 xenoRefGene,196 bothgap chainEquCab2,741 chainHg38,741 chainMm10,741 chainNetEquCab2,744 chainNetHg38,744 chainNetMm10,744 chainNetRn6,747 chainRn6,744 netEquCab2,741 netHg38,741 netMm10,741 netRn6,744 boundaries gold,83 box chainEquCab2,370 chainEquCab2,452 chainHg38,370 chainHg38,452 chainMm10,370 chainMm10,452 chainNetEquCab2,373 chainNetEquCab2,455 chainNetHg38,373 chainNetHg38,455 chainNetMm10,373 chainNetMm10,455 chainNetRn6,376 chainNetRn6,458 chainRn6,373 chainRn6,455 est,206 est,217 est,257 gap,112 intronEst,287 intronEst,298 intronEst,338 mrna,152 mrna,163 mrna,203 netEquCab2,370 netEquCab2,452 netHg38,370 netHg38,452 netMm10,370 netMm10,452 netRn6,373 netRn6,455 refGene,249 xenoRefGene,215 boxes chainEquCab2,121 chainEquCab2,131 chainEquCab2,441 chainHg38,121 chainHg38,131 chainHg38,441 chainMm10,121 chainMm10,131 chainMm10,441 chainNetEquCab2,124 chainNetEquCab2,134 chainNetEquCab2,444 chainNetHg38,124 chainNetHg38,134 chainNetHg38,444 chainNetMm10,124 chainNetMm10,134 chainNetMm10,444 chainNetRn6,126 chainNetRn6,136 chainNetRn6,447 chainRn6,123 chainRn6,133 chainRn6,444 est,177 gap,73 intronEst,258 mrna,123 nestedRepeats,126 netEquCab2,121 netEquCab2,131 netEquCab2,441 netHg38,121 netHg38,131 netHg38,441 netMm10,121 netMm10,131 netMm10,441 netRn6,123 netRn6,133 netRn6,444 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 branch transMapEnsemblV5,219 transMapEstV5,188 transMapRefSeqV5,188 transMapRnaV5,188 transMapV5,294 branch-point augustusGene,56 brejov transMapEnsemblV5,716 transMapEstV5,685 transMapRefSeqV5,685 transMapRnaV5,685 transMapV5,791 bridge gold,133 bridged gap,101 broad chainEquCab2,6 chainEquCab2,68 chainEquCab2,302 chainNetEquCab2,7 chainNetEquCab2,71 chainNetEquCab2,305 chainNetEquCab2Viewchain,5 chainNetEquCab2Viewnet,5 netEquCab2,6 netEquCab2,68 netEquCab2,302 brown gold,93 gold,107 refGene,355 xenoRefGene,320 browser chainEquCab2,970 chainHg38,970 chainMm10,970 chainNetEquCab2,973 chainNetHg38,973 chainNetMm10,973 chainNetRn6,976 chainRn6,973 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 est,224 est,348 est,365 intronEst,305 intronEst,429 intronEst,446 mrna,170 mrna,294 mrna,311 nestedRepeats,243 netEquCab2,970 netHg38,970 netMm10,970 netRn6,973 snp148,462 snp148,499 snp148,1809 snp148,2203 snp148Mult,483 snp148Mult,520 snp148Mult,1830 snp148Mult,2224 transMapEnsemblV5,38 transMapEnsemblV5,165 transMapEnsemblV5,531 transMapEstV5,36 transMapEstV5,134 transMapEstV5,500 transMapRefSeqV5,36 transMapRefSeqV5,134 transMapRefSeqV5,500 transMapRnaV5,36 transMapRnaV5,134 transMapRnaV5,500 transMapV5,35 transMapV5,240 transMapV5,606 ucscToINSDC,20 ucscToRefSeq,15 build snp148,35 snp148Mult,45 snp148Mult,123 builds transMapEnsemblV5,55 built augustusGene,52 augustusGene,68 geneid,92 burge genscan,23 genscan,147 genscan,167 genscan,174 genscan,181 genscan,208 but chainEquCab2,543 chainHg38,543 chainMm10,543 chainNetEquCab2,546 chainNetHg38,546 chainNetMm10,546 chainNetRn6,549 chainRn6,546 est,484 est,541 est,594 intronEst,565 intronEst,622 intronEst,675 netEquCab2,543 netHg38,543 netMm10,543 netRn6,546 rmsk,311 snp148,138 snp148,974 snp148,1000 snp148,1159 snp148,1185 snp148,1350 snp148,1507 snp148,1915 snp148,2110 snp148Mult,107 snp148Mult,995 snp148Mult,1021 snp148Mult,1180 snp148Mult,1206 snp148Mult,1371 snp148Mult,1528 snp148Mult,1936 snp148Mult,2131 button chainEquCab2,341 chainHg38,341 chainMm10,341 chainNetEquCab2,344 chainNetHg38,344 chainNetMm10,344 chainNetRn6,347 chainRn6,344 netEquCab2,341 netHg38,341 netMm10,341 netRn6,344 by augustusGene,148 augustusGene,267 augustusGene,283 chainEquCab2,108 chainEquCab2,124 chainEquCab2,311 chainEquCab2,374 chainEquCab2,411 chainEquCab2,429 chainEquCab2,807 chainEquCab2,919 chainEquCab2,938 chainEquCab2,958 chainEquCab2,982 chainEquCab2,1003 chainHg38,108 chainHg38,124 chainHg38,311 chainHg38,374 chainHg38,411 chainHg38,429 chainHg38,807 chainHg38,919 chainHg38,938 chainHg38,958 chainHg38,982 chainHg38,1003 chainMm10,108 chainMm10,124 chainMm10,311 chainMm10,374 chainMm10,411 chainMm10,429 chainMm10,807 chainMm10,919 chainMm10,938 chainMm10,958 chainMm10,982 chainMm10,1003 chainNetEquCab2,111 chainNetEquCab2,127 chainNetEquCab2,314 chainNetEquCab2,377 chainNetEquCab2,414 chainNetEquCab2,432 chainNetEquCab2,810 chainNetEquCab2,922 chainNetEquCab2,941 chainNetEquCab2,961 chainNetEquCab2,985 chainNetEquCab2,1006 chainNetHg38,111 chainNetHg38,127 chainNetHg38,314 chainNetHg38,377 chainNetHg38,414 chainNetHg38,432 chainNetHg38,810 chainNetHg38,922 chainNetHg38,941 chainNetHg38,961 chainNetHg38,985 chainNetHg38,1006 chainNetMm10,111 chainNetMm10,127 chainNetMm10,314 chainNetMm10,377 chainNetMm10,414 chainNetMm10,432 chainNetMm10,810 chainNetMm10,922 chainNetMm10,941 chainNetMm10,961 chainNetMm10,985 chainNetMm10,1006 chainNetRn6,113 chainNetRn6,129 chainNetRn6,317 chainNetRn6,380 chainNetRn6,417 chainNetRn6,435 chainNetRn6,813 chainNetRn6,925 chainNetRn6,944 chainNetRn6,964 chainNetRn6,988 chainNetRn6,1009 chainRn6,110 chainRn6,126 chainRn6,314 chainRn6,377 chainRn6,414 chainRn6,432 chainRn6,810 chainRn6,922 chainRn6,941 chainRn6,961 chainRn6,985 chainRn6,1006 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 est,266 est,494 est,662 est,740 gap,94 gc5BaseBw,82 geneid,22 genscan,21 genscan,89 genscan,122 gold,86 intronEst,92 intronEst,347 intronEst,575 intronEst,743 intronEst,824 microsat,110 mrna,212 mrna,457 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netEquCab2,108 netEquCab2,124 netEquCab2,311 netEquCab2,374 netEquCab2,411 netEquCab2,429 netEquCab2,807 netEquCab2,919 netEquCab2,938 netEquCab2,958 netEquCab2,982 netEquCab2,1003 netHg38,108 netHg38,124 netHg38,311 netHg38,374 netHg38,411 netHg38,429 netHg38,807 netHg38,919 netHg38,938 netHg38,958 netHg38,982 netHg38,1003 netMm10,108 netMm10,124 netMm10,311 netMm10,374 netMm10,411 netMm10,429 netMm10,807 netMm10,919 netMm10,938 netMm10,958 netMm10,982 netMm10,1003 netRn6,110 netRn6,126 netRn6,314 netRn6,377 netRn6,414 netRn6,432 netRn6,810 netRn6,922 netRn6,941 netRn6,961 netRn6,985 netRn6,1006 refGene,135 refGene,140 refGene,204 refGene,222 refGene,228 refGene,324 refGene,329 rmsk,4 rmsk,14 rmsk,50 sgpGene,29 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 snp148,187 snp148,214 snp148,370 snp148,385 snp148,390 snp148,403 snp148,1360 snp148,1480 snp148,1516 snp148,1546 snp148,1620 snp148,1631 snp148,1637 snp148,1898 snp148,1913 snp148,1995 snp148,2017 snp148,2164 snp148Mult,144 snp148Mult,208 snp148Mult,235 snp148Mult,391 snp148Mult,406 snp148Mult,411 snp148Mult,424 snp148Mult,1381 snp148Mult,1501 snp148Mult,1537 snp148Mult,1567 snp148Mult,1641 snp148Mult,1652 snp148Mult,1658 snp148Mult,1919 snp148Mult,1934 snp148Mult,2016 snp148Mult,2038 snp148Mult,2185 transMapEnsemblV5,24 transMapEnsemblV5,228 transMapEnsemblV5,396 transMapEnsemblV5,679 transMapEnsemblV5,697 transMapEnsemblV5,703 transMapEnsemblV5,741 transMapEstV5,22 transMapEstV5,197 transMapEstV5,365 transMapEstV5,648 transMapEstV5,666 transMapEstV5,672 transMapEstV5,710 transMapRefSeqV5,22 transMapRefSeqV5,197 transMapRefSeqV5,365 transMapRefSeqV5,648 transMapRefSeqV5,666 transMapRefSeqV5,672 transMapRefSeqV5,710 transMapRnaV5,22 transMapRnaV5,197 transMapRnaV5,365 transMapRnaV5,648 transMapRnaV5,666 transMapRnaV5,672 transMapRnaV5,710 transMapV5,21 transMapV5,303 transMapV5,471 transMapV5,754 transMapV5,772 transMapV5,778 transMapV5,816 ucscToINSDC,51 ucscToRefSeq,45 windowmaskerSdust,6 windowmaskerSdust,20 xenoRefGene,101 xenoRefGene,106 xenoRefGene,170 xenoRefGene,188 xenoRefGene,194 xenoRefGene,290 xenoRefGene,295 c cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5BaseBw,24 genscan,182 genscan,209 transMapEnsemblV5,726 transMapEnsemblV5,732 transMapEstV5,695 transMapEstV5,701 transMapRefSeqV5,695 transMapRefSeqV5,701 transMapRnaV5,695 transMapRnaV5,701 transMapV5,801 transMapV5,807 windowmaskerSdust,30 c-111100-75-31 chainEquCab2,669 chainNetEquCab2,672 netEquCab2,669 c-114100-125-31 chainHg38,669 chainMm10,669 chainNetHg38,672 chainNetMm10,672 chainNetRn6,675 chainRn6,672 netHg38,669 netMm10,669 netRn6,672 caenorhabditis augustusGene,213 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 snp148,1515 snp148Mult,1536 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 california chainEquCab2,954 chainEquCab2,1000 chainHg38,954 chainHg38,1000 chainMm10,954 chainMm10,1000 chainNetEquCab2,957 chainNetEquCab2,1003 chainNetHg38,957 chainNetHg38,1003 chainNetMm10,957 chainNetMm10,1003 chainNetRn6,960 chainNetRn6,1006 chainRn6,957 chainRn6,1003 netEquCab2,954 netEquCab2,1000 netHg38,954 netHg38,1000 netMm10,954 netMm10,1000 netRn6,957 netRn6,1003 called snp148,1836 snp148Mult,1857 calls snp148,116 snp148Mult,85 can augustusGene,99 chainEquCab2,90 chainEquCab2,105 chainHg38,90 chainHg38,105 chainMm10,90 chainMm10,105 chainNetEquCab2,93 chainNetEquCab2,108 chainNetHg38,93 chainNetHg38,108 chainNetMm10,93 chainNetMm10,108 chainNetRn6,95 chainNetRn6,110 chainRn6,92 chainRn6,107 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 est,119 est,250 intronEst,200 intronEst,331 mrna,65 mrna,196 netEquCab2,90 netEquCab2,105 netHg38,90 netHg38,105 netMm10,90 netMm10,105 netRn6,92 netRn6,107 refGene,120 rmsk,116 simpleRepeat,35 snp148,229 snp148,257 snp148,1549 snp148,1704 snp148,2196 snp148,2216 snp148Mult,250 snp148Mult,278 snp148Mult,1570 snp148Mult,1725 snp148Mult,2217 snp148Mult,2237 transMapEnsemblV5,524 transMapEnsemblV5,553 transMapEnsemblV5,608 transMapEnsemblV5,616 transMapEnsemblV5,639 transMapEnsemblV5,645 transMapEstV5,493 transMapEstV5,522 transMapEstV5,577 transMapEstV5,585 transMapEstV5,608 transMapEstV5,614 transMapRefSeqV5,493 transMapRefSeqV5,522 transMapRefSeqV5,577 transMapRefSeqV5,585 transMapRefSeqV5,608 transMapRefSeqV5,614 transMapRnaV5,493 transMapRnaV5,522 transMapRnaV5,577 transMapRnaV5,585 transMapRnaV5,608 transMapRnaV5,614 transMapV5,599 transMapV5,628 transMapV5,683 transMapV5,691 transMapV5,714 transMapV5,720 xenoRefGene,86 canonical intronEst,69 cap-selected est,557 intronEst,638 cap-selection est,566 intronEst,647 case snp148,1974 snp148,2011 snp148Mult,1995 snp148Mult,2032 cases chainEquCab2,190 chainEquCab2,398 chainHg38,190 chainHg38,398 chainMm10,190 chainMm10,398 chainNetEquCab2,193 chainNetEquCab2,401 chainNetHg38,193 chainNetHg38,401 chainNetMm10,193 chainNetMm10,401 chainNetRn6,195 chainNetRn6,404 chainRn6,192 chainRn6,401 netEquCab2,190 netEquCab2,398 netHg38,190 netHg38,398 netMm10,190 netMm10,398 netRn6,192 netRn6,401 catalunya geneid,48 sgpGene,57 categories snp148,789 snp148Mult,810 categorized chainEquCab2,499 chainHg38,499 chainMm10,499 chainNetEquCab2,502 chainNetHg38,502 chainNetMm10,502 chainNetRn6,505 chainRn6,502 netEquCab2,499 netHg38,499 netMm10,499 netRn6,502 category snp148,1781 snp148Mult,1802 cauldron chainEquCab2,1052 chainHg38,1052 chainMm10,1052 chainNetEquCab2,1055 chainNetHg38,1055 chainNetMm10,1055 chainNetRn6,1058 chainRn6,1055 netEquCab2,1052 netHg38,1052 netMm10,1052 netRn6,1055 causative snp148,1393 snp148Mult,1414 cause chainEquCab2,481 chainHg38,481 chainMm10,481 chainNetEquCab2,484 chainNetHg38,484 chainNetMm10,484 chainNetRn6,487 chainRn6,484 netEquCab2,481 netHg38,481 netMm10,481 netRn6,484 snp148,1323 snp148Mult,1344 caused chainEquCab2,107 chainHg38,107 chainMm10,107 chainNetEquCab2,110 chainNetHg38,110 chainNetMm10,110 chainNetRn6,112 chainRn6,109 netEquCab2,107 netHg38,107 netMm10,107 netRn6,109 causes snp148,667 snp148,1274 snp148Mult,688 snp148Mult,1295 cavanaugh est,746 intronEst,830 mrna,463 cb transMapEnsemblV5,792 transMapEstV5,761 transMapRefSeqV5,761 transMapRnaV5,761 transMapV5,867 cdna augustusGene,300 est,459 est,462 intronEst,540 intronEst,543 snp148,832 snp148,837 snp148Mult,853 snp148Mult,858 transMapEnsemblV5,389 transMapEnsemblV5,685 transMapEnsemblV5,768 transMapEstV5,358 transMapEstV5,654 transMapEstV5,737 transMapRefSeqV5,358 transMapRefSeqV5,654 transMapRefSeqV5,737 transMapRnaV5,358 transMapRnaV5,654 transMapRnaV5,737 transMapV5,16 transMapV5,464 transMapV5,760 transMapV5,843 cdnas transMapEnsemblV5,125 transMapEstV5,94 transMapRefSeqV5,94 transMapRnaV5,94 transMapV5,200 cds-indel snp148,710 snp148Mult,731 cells est,454 intronEst,535 centre geneid,38 sgpGene,47 cerevisiae augustusGene,223 certain nestedRepeats,294 rmsk,301 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainEquCab2,2 chainEquCab2,27 chainEquCab2,57 chainEquCab2,60 chainEquCab2,118 chainEquCab2,268 chainEquCab2,309 chainEquCab2,404 chainEquCab2,459 chainEquCab2,563 chainEquCab2,767 chainEquCab2,810 chainEquCab2,821 chainEquCab2,829 chainEquCab2,834 chainEquCab2,857 chainEquCab2,866 chainHg38,2 chainHg38,27 chainHg38,57 chainHg38,60 chainHg38,118 chainHg38,268 chainHg38,309 chainHg38,404 chainHg38,459 chainHg38,563 chainHg38,767 chainHg38,810 chainHg38,821 chainHg38,829 chainHg38,834 chainHg38,857 chainHg38,866 chainMm10,2 chainMm10,27 chainMm10,57 chainMm10,60 chainMm10,118 chainMm10,268 chainMm10,309 chainMm10,404 chainMm10,459 chainMm10,563 chainMm10,767 chainMm10,810 chainMm10,821 chainMm10,829 chainMm10,834 chainMm10,857 chainMm10,866 chainNetEquCab2,2 chainNetEquCab2,9 chainNetEquCab2,30 chainNetEquCab2,60 chainNetEquCab2,63 chainNetEquCab2,121 chainNetEquCab2,271 chainNetEquCab2,312 chainNetEquCab2,407 chainNetEquCab2,462 chainNetEquCab2,566 chainNetEquCab2,770 chainNetEquCab2,813 chainNetEquCab2,824 chainNetEquCab2,832 chainNetEquCab2,837 chainNetEquCab2,860 chainNetEquCab2,869 chainNetEquCab2Viewchain,1 chainNetEquCab2Viewchain,7 chainNetEquCab2Viewnet,7 chainNetHg38,2 chainNetHg38,9 chainNetHg38,30 chainNetHg38,60 chainNetHg38,63 chainNetHg38,121 chainNetHg38,271 chainNetHg38,312 chainNetHg38,407 chainNetHg38,462 chainNetHg38,566 chainNetHg38,770 chainNetHg38,813 chainNetHg38,824 chainNetHg38,832 chainNetHg38,837 chainNetHg38,860 chainNetHg38,869 chainNetHg38Viewchain,1 chainNetHg38Viewchain,7 chainNetHg38Viewnet,7 chainNetMm10,2 chainNetMm10,9 chainNetMm10,30 chainNetMm10,60 chainNetMm10,63 chainNetMm10,121 chainNetMm10,271 chainNetMm10,312 chainNetMm10,407 chainNetMm10,462 chainNetMm10,566 chainNetMm10,770 chainNetMm10,813 chainNetMm10,824 chainNetMm10,832 chainNetMm10,837 chainNetMm10,860 chainNetMm10,869 chainNetMm10Viewchain,1 chainNetMm10Viewchain,7 chainNetMm10Viewnet,7 chainNetRn6,2 chainNetRn6,10 chainNetRn6,31 chainNetRn6,61 chainNetRn6,64 chainNetRn6,123 chainNetRn6,273 chainNetRn6,315 chainNetRn6,410 chainNetRn6,465 chainNetRn6,569 chainNetRn6,773 chainNetRn6,816 chainNetRn6,827 chainNetRn6,835 chainNetRn6,840 chainNetRn6,863 chainNetRn6,872 chainNetRn6Viewchain,1 chainNetRn6Viewchain,8 chainNetRn6Viewnet,8 chainRn6,2 chainRn6,28 chainRn6,58 chainRn6,61 chainRn6,120 chainRn6,270 chainRn6,312 chainRn6,407 chainRn6,462 chainRn6,566 chainRn6,770 chainRn6,813 chainRn6,824 chainRn6,832 chainRn6,837 chainRn6,860 chainRn6,869 netEquCab2,27 netEquCab2,57 netEquCab2,60 netEquCab2,118 netEquCab2,268 netEquCab2,309 netEquCab2,404 netEquCab2,459 netEquCab2,563 netEquCab2,767 netEquCab2,810 netEquCab2,821 netEquCab2,829 netEquCab2,834 netEquCab2,857 netEquCab2,866 netHg38,27 netHg38,57 netHg38,60 netHg38,118 netHg38,268 netHg38,309 netHg38,404 netHg38,459 netHg38,563 netHg38,767 netHg38,810 netHg38,821 netHg38,829 netHg38,834 netHg38,857 netHg38,866 netMm10,27 netMm10,57 netMm10,60 netMm10,118 netMm10,268 netMm10,309 netMm10,404 netMm10,459 netMm10,563 netMm10,767 netMm10,810 netMm10,821 netMm10,829 netMm10,834 netMm10,857 netMm10,866 netRn6,28 netRn6,58 netRn6,61 netRn6,120 netRn6,270 netRn6,312 netRn6,407 netRn6,462 netRn6,566 netRn6,770 netRn6,813 netRn6,824 netRn6,832 netRn6,837 netRn6,860 netRn6,869 transMapV5,138 chained chainEquCab2,8 chainHg38,8 chainMm10,8 chainRn6,9 chainnet chainEquCab2,784 chainEquCab2,989 chainHg38,784 chainHg38,989 chainMm10,784 chainMm10,989 chainNetEquCab2,787 chainNetEquCab2,992 chainNetHg38,787 chainNetHg38,992 chainNetMm10,787 chainNetMm10,992 chainNetRn6,790 chainNetRn6,995 chainRn6,787 chainRn6,992 netEquCab2,784 netEquCab2,989 netHg38,784 netHg38,989 netMm10,784 netMm10,989 netRn6,787 netRn6,992 chains chainEquCab2,193 chainEquCab2,204 chainEquCab2,215 chainEquCab2,314 chainEquCab2,353 chainEquCab2,386 chainEquCab2,391 chainEquCab2,413 chainEquCab2,425 chainEquCab2,432 chainEquCab2,489 chainEquCab2,657 chainEquCab2,672 chainEquCab2,686 chainEquCab2,755 chainEquCab2,776 chainEquCab2,791 chainEquCab2,851 chainEquCab2,882 chainEquCab2,977 chainHg38,193 chainHg38,204 chainHg38,215 chainHg38,314 chainHg38,353 chainHg38,386 chainHg38,391 chainHg38,413 chainHg38,425 chainHg38,432 chainHg38,489 chainHg38,657 chainHg38,672 chainHg38,686 chainHg38,755 chainHg38,776 chainHg38,791 chainHg38,851 chainHg38,882 chainHg38,977 chainMm10,193 chainMm10,204 chainMm10,215 chainMm10,314 chainMm10,353 chainMm10,386 chainMm10,391 chainMm10,413 chainMm10,425 chainMm10,432 chainMm10,489 chainMm10,657 chainMm10,672 chainMm10,686 chainMm10,755 chainMm10,776 chainMm10,791 chainMm10,851 chainMm10,882 chainMm10,977 chainNetEquCab2,196 chainNetEquCab2,207 chainNetEquCab2,218 chainNetEquCab2,317 chainNetEquCab2,356 chainNetEquCab2,389 chainNetEquCab2,394 chainNetEquCab2,416 chainNetEquCab2,428 chainNetEquCab2,435 chainNetEquCab2,492 chainNetEquCab2,660 chainNetEquCab2,675 chainNetEquCab2,689 chainNetEquCab2,758 chainNetEquCab2,779 chainNetEquCab2,794 chainNetEquCab2,854 chainNetEquCab2,885 chainNetEquCab2,980 chainNetHg38,196 chainNetHg38,207 chainNetHg38,218 chainNetHg38,317 chainNetHg38,356 chainNetHg38,389 chainNetHg38,394 chainNetHg38,416 chainNetHg38,428 chainNetHg38,435 chainNetHg38,492 chainNetHg38,660 chainNetHg38,675 chainNetHg38,689 chainNetHg38,758 chainNetHg38,779 chainNetHg38,794 chainNetHg38,854 chainNetHg38,885 chainNetHg38,980 chainNetMm10,196 chainNetMm10,207 chainNetMm10,218 chainNetMm10,317 chainNetMm10,356 chainNetMm10,389 chainNetMm10,394 chainNetMm10,416 chainNetMm10,428 chainNetMm10,435 chainNetMm10,492 chainNetMm10,660 chainNetMm10,675 chainNetMm10,689 chainNetMm10,758 chainNetMm10,779 chainNetMm10,794 chainNetMm10,854 chainNetMm10,885 chainNetMm10,980 chainNetRn6,198 chainNetRn6,209 chainNetRn6,220 chainNetRn6,320 chainNetRn6,359 chainNetRn6,392 chainNetRn6,397 chainNetRn6,419 chainNetRn6,431 chainNetRn6,438 chainNetRn6,495 chainNetRn6,663 chainNetRn6,678 chainNetRn6,692 chainNetRn6,761 chainNetRn6,782 chainNetRn6,797 chainNetRn6,857 chainNetRn6,888 chainNetRn6,983 chainRn6,195 chainRn6,206 chainRn6,217 chainRn6,317 chainRn6,356 chainRn6,389 chainRn6,394 chainRn6,416 chainRn6,428 chainRn6,435 chainRn6,492 chainRn6,660 chainRn6,675 chainRn6,689 chainRn6,758 chainRn6,779 chainRn6,794 chainRn6,854 chainRn6,885 chainRn6,980 netEquCab2,193 netEquCab2,204 netEquCab2,215 netEquCab2,314 netEquCab2,353 netEquCab2,386 netEquCab2,391 netEquCab2,413 netEquCab2,425 netEquCab2,432 netEquCab2,489 netEquCab2,657 netEquCab2,672 netEquCab2,686 netEquCab2,755 netEquCab2,776 netEquCab2,791 netEquCab2,851 netEquCab2,882 netEquCab2,977 netHg38,193 netHg38,204 netHg38,215 netHg38,314 netHg38,353 netHg38,386 netHg38,391 netHg38,413 netHg38,425 netHg38,432 netHg38,489 netHg38,657 netHg38,672 netHg38,686 netHg38,755 netHg38,776 netHg38,791 netHg38,851 netHg38,882 netHg38,977 netMm10,193 netMm10,204 netMm10,215 netMm10,314 netMm10,353 netMm10,386 netMm10,391 netMm10,413 netMm10,425 netMm10,432 netMm10,489 netMm10,657 netMm10,672 netMm10,686 netMm10,755 netMm10,776 netMm10,791 netMm10,851 netMm10,882 netMm10,977 netRn6,195 netRn6,206 netRn6,217 netRn6,317 netRn6,356 netRn6,389 netRn6,394 netRn6,416 netRn6,428 netRn6,435 netRn6,492 netRn6,660 netRn6,675 netRn6,689 netRn6,758 netRn6,779 netRn6,794 netRn6,854 netRn6,885 netRn6,980 transMapEnsemblV5,81 transMapEnsemblV5,198 transMapEnsemblV5,211 transMapEnsemblV5,257 transMapEnsemblV5,282 transMapEnsemblV5,330 transMapEnsemblV5,511 transMapEstV5,50 transMapEstV5,167 transMapEstV5,180 transMapEstV5,226 transMapEstV5,251 transMapEstV5,299 transMapEstV5,480 transMapRefSeqV5,50 transMapRefSeqV5,167 transMapRefSeqV5,180 transMapRefSeqV5,226 transMapRefSeqV5,251 transMapRefSeqV5,299 transMapRefSeqV5,480 transMapRnaV5,50 transMapRnaV5,167 transMapRnaV5,180 transMapRnaV5,226 transMapRnaV5,251 transMapRnaV5,299 transMapRnaV5,480 transMapV5,51 transMapV5,87 transMapV5,273 transMapV5,286 transMapV5,332 transMapV5,357 transMapV5,405 transMapV5,586 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 est,123 intronEst,204 mrna,69 snp148,516 snp148,607 snp148,699 snp148,1865 snp148,1882 snp148Mult,537 snp148Mult,628 snp148Mult,720 snp148Mult,1886 snp148Mult,1903 changed rmsk,285 snp148,84 snp148,586 snp148,623 snp148,653 snp148Mult,607 snp148Mult,644 snp148Mult,674 changes snp148,738 snp148,758 snp148Mult,759 snp148Mult,779 chapter geneid,173 characteristic est,328 intronEst,409 mrna,274 check chainEquCab2,336 chainHg38,336 chainMm10,336 chainNetEquCab2,339 chainNetHg38,339 chainNetMm10,339 chainNetRn6,342 chainRn6,339 netEquCab2,336 netHg38,336 netMm10,336 netRn6,339 snp148,1433 snp148,1450 snp148,1474 snp148Mult,1454 snp148Mult,1471 snp148Mult,1495 checks snp148,848 snp148Mult,869 chiaromonte chainEquCab2,1022 chainHg38,1022 chainMm10,1022 chainNetEquCab2,1025 chainNetHg38,1025 chainNetMm10,1025 chainNetRn6,1028 chainRn6,1025 netEquCab2,1022 netHg38,1022 netMm10,1022 netRn6,1025 chicken augustusGene,205 augustusGene,263 choose augustusGene,172 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 est,284 est,323 intronEst,365 intronEst,404 mrna,230 mrna,269 snp148,1724 snp148Mult,1745 chosen est,346 intronEst,427 mrna,292 chr4 chainEquCab2,368 chainHg38,368 chainMm10,368 chainNetEquCab2,371 chainNetHg38,371 chainNetMm10,371 chainNetRn6,374 chainRn6,371 netEquCab2,368 netHg38,368 netMm10,368 netRn6,371 chr6 transMapEnsemblV5,668 transMapEstV5,637 transMapRefSeqV5,637 transMapRnaV5,637 transMapV5,743 chris genscan,22 genscan,173 chrm gold,159 chrom transMapEnsemblV5,667 transMapEstV5,636 transMapRefSeqV5,636 transMapRnaV5,636 transMapV5,742 chromosome chainEquCab2,245 chainEquCab2,323 chainEquCab2,348 chainEquCab2,356 chainEquCab2,366 chainEquCab2,375 chainEquCab2,522 chainEquCab2,537 chainEquCab2,553 chainEquCab2,621 chainEquCab2,626 chainHg38,245 chainHg38,323 chainHg38,348 chainHg38,356 chainHg38,366 chainHg38,375 chainHg38,522 chainHg38,537 chainHg38,553 chainHg38,621 chainHg38,626 chainMm10,245 chainMm10,323 chainMm10,348 chainMm10,356 chainMm10,366 chainMm10,375 chainMm10,522 chainMm10,537 chainMm10,553 chainMm10,621 chainMm10,626 chainNetEquCab2,248 chainNetEquCab2,326 chainNetEquCab2,351 chainNetEquCab2,359 chainNetEquCab2,369 chainNetEquCab2,378 chainNetEquCab2,525 chainNetEquCab2,540 chainNetEquCab2,556 chainNetEquCab2,624 chainNetEquCab2,629 chainNetHg38,248 chainNetHg38,326 chainNetHg38,351 chainNetHg38,359 chainNetHg38,369 chainNetHg38,378 chainNetHg38,525 chainNetHg38,540 chainNetHg38,556 chainNetHg38,624 chainNetHg38,629 chainNetMm10,248 chainNetMm10,326 chainNetMm10,351 chainNetMm10,359 chainNetMm10,369 chainNetMm10,378 chainNetMm10,525 chainNetMm10,540 chainNetMm10,556 chainNetMm10,624 chainNetMm10,629 chainNetRn6,250 chainNetRn6,329 chainNetRn6,354 chainNetRn6,362 chainNetRn6,372 chainNetRn6,381 chainNetRn6,528 chainNetRn6,543 chainNetRn6,559 chainNetRn6,627 chainNetRn6,632 chainRn6,247 chainRn6,326 chainRn6,351 chainRn6,359 chainRn6,369 chainRn6,378 chainRn6,525 chainRn6,540 chainRn6,556 chainRn6,624 chainRn6,629 cytoBandIdeo,1 gap,144 netEquCab2,245 netEquCab2,323 netEquCab2,348 netEquCab2,356 netEquCab2,366 netEquCab2,375 netEquCab2,522 netEquCab2,537 netEquCab2,553 netEquCab2,621 netEquCab2,626 netHg38,245 netHg38,323 netHg38,348 netHg38,356 netHg38,366 netHg38,375 netHg38,522 netHg38,537 netHg38,553 netHg38,621 netHg38,626 netMm10,245 netMm10,323 netMm10,348 netMm10,356 netMm10,366 netMm10,375 netMm10,522 netMm10,537 netMm10,553 netMm10,621 netMm10,626 netRn6,247 netRn6,326 netRn6,351 netRn6,359 netRn6,369 netRn6,378 netRn6,525 netRn6,540 netRn6,556 netRn6,624 netRn6,629 ucscToINSDC,21 ucscToRefSeq,16 chromosome-based chainEquCab2,316 chainHg38,316 chainMm10,316 chainNetEquCab2,319 chainNetHg38,319 chainNetMm10,319 chainNetRn6,322 chainRn6,319 netEquCab2,316 netHg38,316 netMm10,316 netRn6,319 chromosomes snp148,1033 snp148,1673 snp148Mult,1054 snp148Mult,1694 circle rmsk,202 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 cl transMapEnsemblV5,724 transMapEstV5,693 transMapRefSeqV5,693 transMapRnaV5,693 transMapV5,799 clark est,748 intronEst,832 mrna,465 class rmsk,199 rmsk,253 snp148,242 snp148,1087 snp148,1116 snp148,1216 snp148,1835 snp148,2187 snp148Mult,263 snp148Mult,1108 snp148Mult,1137 snp148Mult,1237 snp148Mult,1856 snp148Mult,2208 classes rmsk,150 snp148,327 snp148Mult,348 classification rmsk,266 rmsk,282 snp148,368 snp148,503 snp148,2096 snp148Mult,389 snp148Mult,524 snp148Mult,2117 clawson gc5BaseBw,84 ucscToINSDC,53 ucscToRefSeq,47 click chainEquCab2,449 chainEquCab2,463 chainHg38,449 chainHg38,463 chainMm10,449 chainMm10,463 chainNetEquCab2,452 chainNetEquCab2,466 chainNetHg38,452 chainNetHg38,466 chainNetMm10,452 chainNetMm10,466 chainNetRn6,455 chainNetRn6,469 chainRn6,452 chainRn6,466 gc5BaseBw,57 netEquCab2,449 netEquCab2,463 netHg38,449 netHg38,463 netMm10,449 netMm10,463 netRn6,452 netRn6,466 refGene,143 refGene,247 snp148,487 snp148Mult,508 transMapEnsemblV5,136 transMapEnsemblV5,150 transMapEstV5,105 transMapEstV5,119 transMapRefSeqV5,105 transMapRefSeqV5,119 transMapRnaV5,105 transMapRnaV5,119 transMapV5,211 transMapV5,225 xenoRefGene,109 xenoRefGene,213 clinical snp148,1284 snp148Mult,1305 clinically snp148,1248 snp148Mult,1269 clinically-associated snp148,2168 snp148Mult,2189 clipped nestedRepeats,224 cloned est,464 intronEst,545 close snp148,1771 snp148Mult,1792 closer transMapEnsemblV5,69 transMapEstV5,38 transMapRefSeqV5,38 transMapRnaV5,38 transMapV5,37 closest augustusGene,242 cluster snp148,322 snp148,398 snp148,404 snp148,405 snp148,1445 snp148Mult,343 snp148Mult,419 snp148Mult,425 snp148Mult,426 snp148Mult,1466 clustered snp148,1455 snp148,1615 snp148,1697 snp148Mult,1476 snp148Mult,1636 snp148Mult,1718 clusters snp148,1531 snp148Mult,1552 cm refGene,366 xenoRefGene,331 code transMapEnsemblV5,622 transMapEnsemblV5,636 transMapEstV5,591 transMapEstV5,605 transMapRefSeqV5,591 transMapRefSeqV5,605 transMapRnaV5,591 transMapRnaV5,605 transMapV5,697 transMapV5,711 windowmaskerSdust,34 coding geneid,119 refGene,245 simpleRepeat,38 snp148,567 snp148,694 snp148,798 snp148,801 snp148,1717 snp148,1746 snp148Mult,588 snp148Mult,715 snp148Mult,819 snp148Mult,822 snp148Mult,1738 snp148Mult,1767 xenoRefGene,211 coding-synon snp148,524 snp148Mult,545 codon genscan,101 genscan,123 mrna,330 mrna,355 refGene,171 refGene,178 refGene,193 refGene,223 snp148,584 snp148,592 snp148,621 snp148,627 snp148,650 snp148Mult,605 snp148Mult,613 snp148Mult,642 snp148Mult,648 snp148Mult,671 transMapEnsemblV5,114 transMapEstV5,83 transMapRefSeqV5,83 transMapRnaV5,83 transMapV5,189 xenoRefGene,137 xenoRefGene,144 xenoRefGene,159 xenoRefGene,189 codons geneid,76 genscan,90 genscan,94 refGene,198 refGene,205 xenoRefGene,164 xenoRefGene,171 cognate transMapEnsemblV5,180 transMapEstV5,149 transMapRefSeqV5,149 transMapRnaV5,149 transMapV5,255 collaboration ucscToINSDC,9 ucscToINSDC,32 collapsed nestedRepeats,173 collection refGene,29 xenoRefGene,32 collectively snp148,28 snp148Mult,38 color chainEquCab2,344 chainHg38,344 chainMm10,344 chainNetEquCab2,347 chainNetHg38,347 chainNetMm10,347 chainNetRn6,350 chainRn6,347 est,129 est,325 genscan,87 genscan,97 intronEst,210 intronEst,406 mrna,75 mrna,271 netEquCab2,344 netHg38,344 netMm10,344 netRn6,347 refGene,91 refGene,202 rmsk,207 xenoRefGene,57 xenoRefGene,168 coloration gold,94 colored chainEquCab2,319 chainHg38,319 chainMm10,319 chainNetEquCab2,322 chainNetHg38,322 chainNetMm10,322 chainNetRn6,325 chainRn6,322 est,432 intronEst,513 mrna,371 netEquCab2,319 netHg38,319 netMm10,319 netRn6,322 snp148,231 snp148Mult,252 transMapEnsemblV5,146 transMapEstV5,115 transMapRefSeqV5,115 transMapRnaV5,115 transMapV5,221 coloring chainEquCab2,335 chainHg38,335 chainMm10,335 chainNetEquCab2,338 chainNetHg38,338 chainNetMm10,338 chainNetRn6,341 chainRn6,338 est,419 genscan,117 intronEst,500 mrna,331 mrna,358 netEquCab2,335 netHg38,335 netMm10,335 netRn6,338 refGene,172 refGene,179 refGene,217 snp148,775 snp148,1505 snp148Mult,796 snp148Mult,1526 transMapEnsemblV5,115 transMapEstV5,84 transMapRefSeqV5,84 transMapRnaV5,84 transMapV5,190 xenoRefGene,138 xenoRefGene,145 xenoRefGene,183 colors refGene,114 refGene,194 snp148,794 snp148Mult,815 xenoRefGene,80 xenoRefGene,160 column nestedRepeats,107 columns transMapEnsemblV5,551 transMapEstV5,520 transMapRefSeqV5,520 transMapRnaV5,520 transMapV5,626 combination est,287 intronEst,368 mrna,233 combined rmsk,232 combines sgpGene,67 snp148,1686 snp148Mult,1707 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 transMapEnsemblV5,255 transMapEstV5,224 transMapRefSeqV5,224 transMapRnaV5,224 transMapV5,330 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 snp148,1318 snp148Mult,1339 comparative chainEquCab2,10 chainHg38,10 chainMm10,10 chainNetEquCab2,13 chainNetEquCab2Viewchain,11 chainNetEquCab2Viewnet,11 chainNetHg38,13 chainNetHg38Viewchain,11 chainNetHg38Viewnet,11 chainNetMm10,13 chainNetMm10Viewchain,11 chainNetMm10Viewnet,11 chainNetRn6,14 chainNetRn6Viewchain,12 chainNetRn6Viewnet,12 chainRn6,11 netEquCab2,10 netHg38,10 netMm10,10 netRn6,11 transMapEnsemblV5,742 transMapEnsemblV5,797 transMapEstV5,711 transMapEstV5,766 transMapRefSeqV5,711 transMapRefSeqV5,766 transMapRnaV5,711 transMapRnaV5,766 transMapV5,817 transMapV5,872 compare mrna,340 refGene,188 snp148,1839 snp148Mult,1860 transMapEnsemblV5,124 transMapEstV5,93 transMapRefSeqV5,93 transMapRnaV5,93 transMapV5,199 xenoRefGene,154 compared transMapV5,154 comparison genscan,110 comparisons sgpGene,72 compiled transMapEnsemblV5,618 transMapEstV5,587 transMapRefSeqV5,587 transMapRnaV5,587 transMapV5,693 complement snp148,1147 snp148Mult,1168 complete genscan,214 completely refGene,170 xenoRefGene,136 complex chainEquCab2,161 chainHg38,161 chainMm10,161 chainNetEquCab2,164 chainNetHg38,164 chainNetMm10,164 chainNetRn6,166 chainRn6,163 netEquCab2,161 netHg38,161 netMm10,161 netRn6,163 complexity nestedRepeats,40 rmsk,30 rmsk,182 component gold,136 compositional genscan,42 comprise snp148,2028 snp148Mult,2049 comput transMapEnsemblV5,810 transMapEstV5,779 transMapRefSeqV5,779 transMapRnaV5,779 transMapV5,885 computation snp148,1521 snp148Mult,1542 computational geneid,27 geneid,146 genscan,197 sgpGene,35 sgpGene,104 computed transMapEnsemblV5,227 transMapEstV5,196 transMapRefSeqV5,196 transMapRnaV5,196 transMapV5,302 comstock transMapEnsemblV5,723 transMapEstV5,692 transMapRefSeqV5,692 transMapRnaV5,692 transMapV5,798 concerning refGene,61 condition snp148,1204 snp148,1966 snp148Mult,1225 snp148Mult,1987 conditional augustusGene,119 conditions snp148,845 snp148Mult,866 configuration chainEquCab2,308 chainHg38,308 chainMm10,308 chainNetEquCab2,311 chainNetHg38,311 chainNetMm10,311 chainNetRn6,314 chainRn6,311 est,47 gc5BaseBw,61 gc5BaseBw,70 genscan,65 genscan,85 intronEst,131 mrna,28 nestedRepeats,114 netEquCab2,308 netHg38,308 netMm10,308 netRn6,311 refGene,79 rmsk,138 snp148,1734 snp148Mult,1755 transMapEnsemblV5,95 transMapEstV5,64 transMapRefSeqV5,64 transMapRnaV5,64 transMapV5,170 xenoRefGene,45 configure snp148,1705 snp148Mult,1726 configured est,381 gc5BaseBw,43 intronEst,462 mrna,327 refGene,122 transMapEnsemblV5,111 transMapEstV5,80 transMapRefSeqV5,80 transMapRnaV5,80 transMapV5,186 xenoRefGene,88 configuring snp148,143 snp148Mult,164 conflict snp148,1431 snp148Mult,1452 conservation transMapEnsemblV5,231 transMapEstV5,200 transMapRefSeqV5,200 transMapRnaV5,200 transMapV5,306 considerable est,638 intronEst,719 considered intronEst,58 consortia snp148,1609 snp148Mult,1630 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult est,218 intronEst,299 mrna,164 contain transMapV5,15 contained chainEquCab2,883 chainHg38,883 chainMm10,883 chainNetEquCab2,886 chainNetHg38,886 chainNetMm10,886 chainNetRn6,889 chainRn6,886 netEquCab2,883 netHg38,883 netMm10,883 netRn6,886 snp148,50 containing transMapEnsemblV5,546 transMapEstV5,515 transMapRefSeqV5,515 transMapRnaV5,515 transMapV5,621 contains est,243 gap,118 intronEst,324 mrna,189 refGene,175 snp148,15 snp148,272 snp148,323 snp148,1059 snp148Mult,21 snp148Mult,293 snp148Mult,344 snp148Mult,1080 transMapEnsemblV5,18 transMapEstV5,16 transMapRefSeqV5,17 transMapRnaV5,17 xenoRefGene,141 contamination est,626 intronEst,98 intronEst,707 content augustusGene,72 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5BaseBw,32 contig gap,125 gold,82 contigs gap,85 gap,128 gold,74 gold,99 gold,116 contributor snp148,372 snp148Mult,393 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 refGene,125 snp148,88 snp148,226 snp148,781 snp148Mult,247 snp148Mult,802 xenoRefGene,91 conventions chainEquCab2,306 chainHg38,306 chainMm10,306 chainNetEquCab2,309 chainNetHg38,309 chainNetMm10,309 chainNetRn6,312 chainRn6,309 est,45 est,53 genscan,63 genscan,71 intronEst,129 intronEst,137 mrna,26 mrna,34 nestedRepeats,112 netEquCab2,306 netHg38,306 netMm10,306 netRn6,309 refGene,77 refGene,85 rmsk,136 transMapEnsemblV5,93 transMapEnsemblV5,101 transMapEstV5,62 transMapEstV5,70 transMapRefSeqV5,62 transMapRefSeqV5,70 transMapRnaV5,62 transMapRnaV5,70 transMapV5,168 transMapV5,176 xenoRefGene,43 xenoRefGene,51 converted chainEquCab2,598 chainHg38,598 chainMm10,598 chainNetEquCab2,601 chainNetHg38,601 chainNetMm10,601 chainNetRn6,604 chainRn6,601 netEquCab2,598 netHg38,598 netMm10,598 netRn6,601 coordinates snp148,2075 snp148Mult,2096 copies microsat,80 corrections refGene,56 corresponding transMapEnsemblV5,258 transMapEstV5,227 transMapRefSeqV5,227 transMapRnaV5,227 transMapV5,333 corresponds est,226 intronEst,307 mrna,172 snp148,173 snp148,1026 snp148Mult,194 snp148Mult,1047 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 gap,131 gap,146 snp148,1031 snp148,1044 snp148Mult,1052 snp148Mult,1065 counts gold,143 snp148,285 snp148,1691 snp148Mult,306 snp148Mult,1712 cover est,559 intronEst,640 covered chainEquCab2,806 chainHg38,806 chainMm10,806 chainNetEquCab2,809 chainNetHg38,809 chainNetMm10,809 chainNetRn6,812 chainRn6,809 gap,25 gold,27 netEquCab2,806 netHg38,806 netMm10,806 netRn6,809 cow chainEquCab2,72 chainEquCab2,98 chainEquCab2,155 chainEquCab2,201 chainEquCab2,267 chainEquCab2,274 chainEquCab2,573 chainEquCab2,625 chainHg38,72 chainHg38,98 chainHg38,155 chainHg38,201 chainHg38,267 chainHg38,274 chainHg38,573 chainHg38,625 chainMm10,72 chainMm10,98 chainMm10,155 chainMm10,201 chainMm10,267 chainMm10,274 chainMm10,573 chainMm10,625 chainNetEquCab2,75 chainNetEquCab2,101 chainNetEquCab2,158 chainNetEquCab2,204 chainNetEquCab2,270 chainNetEquCab2,277 chainNetEquCab2,576 chainNetEquCab2,628 chainNetHg38,75 chainNetHg38,101 chainNetHg38,158 chainNetHg38,204 chainNetHg38,270 chainNetHg38,277 chainNetHg38,576 chainNetHg38,628 chainNetMm10,75 chainNetMm10,101 chainNetMm10,158 chainNetMm10,204 chainNetMm10,270 chainNetMm10,277 chainNetMm10,576 chainNetMm10,628 chainNetRn6,77 chainNetRn6,103 chainNetRn6,160 chainNetRn6,206 chainNetRn6,272 chainNetRn6,279 chainNetRn6,579 chainNetRn6,631 chainRn6,74 chainRn6,100 chainRn6,157 chainRn6,203 chainRn6,269 chainRn6,276 chainRn6,576 chainRn6,628 est,1 est,3 est,17 est,644 gap,18 gold,20 intronEst,3 intronEst,19 intronEst,125 intronEst,725 mrna,1 mrna,3 mrna,18 mrna,386 netEquCab2,72 netEquCab2,98 netEquCab2,155 netEquCab2,201 netEquCab2,267 netEquCab2,274 netEquCab2,573 netEquCab2,625 netHg38,72 netHg38,98 netHg38,155 netHg38,201 netHg38,267 netHg38,274 netHg38,573 netHg38,625 netMm10,72 netMm10,98 netMm10,155 netMm10,201 netMm10,267 netMm10,274 netMm10,573 netMm10,625 netRn6,74 netRn6,100 netRn6,157 netRn6,203 netRn6,269 netRn6,276 netRn6,576 netRn6,628 refGene,17 refGene,257 sgpGene,7 transMapEnsemblV5,91 transMapEnsemblV5,203 transMapEnsemblV5,333 transMapEnsemblV5,449 transMapEstV5,60 transMapEstV5,172 transMapEstV5,302 transMapEstV5,418 transMapRefSeqV5,60 transMapRefSeqV5,172 transMapRefSeqV5,302 transMapRefSeqV5,418 transMapRnaV5,60 transMapRnaV5,172 transMapRnaV5,302 transMapRnaV5,418 transMapV5,61 transMapV5,278 transMapV5,408 transMapV5,524 xenoRefGene,24 xenoRefGene,223 cow_9913 snp148,2056 snp148,2071 snp148Mult,2077 snp148Mult,2092 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 create windowmaskerSdust,48 created chainEquCab2,981 chainHg38,981 chainMm10,981 chainNetEquCab2,984 chainNetHg38,984 chainNetMm10,984 chainNetRn6,987 chainRn6,984 microsat,89 netEquCab2,981 netHg38,981 netMm10,981 netRn6,984 rmsk,13 transMapEnsemblV5,75 transMapEstV5,44 transMapRefSeqV5,44 transMapRnaV5,44 transMapV5,43 creates chainEquCab2,631 chainHg38,631 chainMm10,631 chainNetEquCab2,634 chainNetHg38,634 chainNetMm10,634 chainNetRn6,637 chainRn6,634 netEquCab2,631 netHg38,631 netMm10,631 netRn6,634 credits augustusGene,248 chainEquCab2,907 chainHg38,907 chainMm10,907 chainNetEquCab2,910 chainNetHg38,910 chainNetMm10,910 chainNetRn6,913 chainRn6,910 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 est,722 gc5BaseBw,72 geneid,143 genscan,170 intronEst,806 microsat,104 mrna,438 nestedRepeats,302 netEquCab2,907 netHg38,907 netMm10,907 netRn6,910 refGene,312 rmsk,325 sgpGene,99 simpleRepeat,66 transMapEnsemblV5,674 transMapEstV5,643 transMapRefSeqV5,643 transMapRnaV5,643 transMapV5,749 ucscToINSDC,43 ucscToRefSeq,37 xenoRefGene,278 crg geneid,45 sgpGene,54 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 est,301 est,319 est,357 est,375 intronEst,382 intronEst,400 intronEst,438 intronEst,456 mrna,247 mrna,265 mrna,303 mrna,321 transMapEnsemblV5,357 transMapEstV5,326 transMapRefSeqV5,326 transMapRnaV5,326 transMapV5,432 cross-species transMapEnsemblV5,27 transMapEstV5,25 transMapRefSeqV5,25 transMapRnaV5,25 transMapV5,24 cruz chainEquCab2,957 chainEquCab2,1002 chainHg38,957 chainHg38,1002 chainMm10,957 chainMm10,1002 chainNetEquCab2,960 chainNetEquCab2,1005 chainNetHg38,960 chainNetHg38,1005 chainNetMm10,960 chainNetMm10,1005 chainNetRn6,963 chainNetRn6,1008 chainRn6,960 chainRn6,1005 netEquCab2,957 netEquCab2,1002 netHg38,957 netHg38,1002 netMm10,957 netMm10,1002 netRn6,960 netRn6,1005 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 culex augustusGene,221 curated refGene,328 refGene,406 snp148,442 snp148Mult,463 xenoRefGene,294 xenoRefGene,371 curator rmsk,261 curr geneid,168 nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current est,161 intronEst,242 mrna,107 nestedRepeats,250 currently gold,79 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5BaseBw,25 d augustusGene,294 chainEquCab2,1049 chainEquCab2,1093 chainHg38,1049 chainHg38,1093 chainMm10,1049 chainMm10,1093 chainNetEquCab2,1052 chainNetEquCab2,1096 chainNetHg38,1052 chainNetHg38,1096 chainNetMm10,1052 chainNetMm10,1096 chainNetRn6,1055 chainNetRn6,1099 chainRn6,1052 chainRn6,1096 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 genscan,193 netEquCab2,1049 netEquCab2,1093 netHg38,1049 netHg38,1093 netMm10,1049 netMm10,1093 netRn6,1052 netRn6,1096 transMapEnsemblV5,762 transMapEnsemblV5,796 transMapEstV5,731 transMapEstV5,765 transMapRefSeqV5,731 transMapRefSeqV5,765 transMapRnaV5,731 transMapRnaV5,765 transMapV5,837 transMapV5,871 d23-6 est,793 intronEst,877 mrna,510 d36-42 est,767 intronEst,851 mrna,484 d501-4 refGene,424 xenoRefGene,389 d756-63 refGene,390 xenoRefGene,355 da est,745 est,773 intronEst,829 intronEst,857 mrna,462 mrna,490 dark refGene,108 xenoRefGene,74 darker intronEst,146 darkly est,67 mrna,48 data cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 est,732 gap,97 gc5BaseBw,74 geneid,154 intronEst,816 microsat,47 mrna,449 nestedRepeats,263 nestedRepeats,280 refGene,32 refGene,322 rmsk,126 rmsk,287 sgpGene,114 snp148,371 snp148,401 snp148,888 snp148,1573 snp148,2021 snp148,2026 snp148,2083 snp148,2191 snp148,2195 snp148,2204 snp148,2244 snp148Mult,392 snp148Mult,422 snp148Mult,909 snp148Mult,1594 snp148Mult,2042 snp148Mult,2047 snp148Mult,2104 snp148Mult,2212 snp148Mult,2216 snp148Mult,2225 snp148Mult,2265 transMapEnsemblV5,516 transMapEnsemblV5,520 transMapEnsemblV5,534 transMapEnsemblV5,571 transMapEnsemblV5,575 transMapEnsemblV5,689 transMapEstV5,485 transMapEstV5,489 transMapEstV5,503 transMapEstV5,540 transMapEstV5,544 transMapEstV5,658 transMapRefSeqV5,485 transMapRefSeqV5,489 transMapRefSeqV5,503 transMapRefSeqV5,540 transMapRefSeqV5,544 transMapRefSeqV5,658 transMapRnaV5,485 transMapRnaV5,489 transMapRnaV5,503 transMapRnaV5,540 transMapRnaV5,544 transMapRnaV5,658 transMapV5,591 transMapV5,595 transMapV5,609 transMapV5,646 transMapV5,650 transMapV5,764 ucscToINSDC,35 ucscToINSDC,45 ucscToRefSeq,29 ucscToRefSeq,39 xenoRefGene,35 xenoRefGene,288 database chainEquCab2,973 chainHg38,973 chainMm10,973 chainNetEquCab2,976 chainNetHg38,976 chainNetMm10,976 chainNetRn6,979 chainRn6,976 est,765 est,791 intronEst,849 intronEst,875 mrna,482 mrna,508 nestedRepeats,345 netEquCab2,973 netHg38,973 netMm10,973 netRn6,976 refGene,388 refGene,409 refGene,422 rmsk,125 rmsk,368 snp148,1265 snp148,1355 snp148,1362 snp148,1375 snp148,2034 snp148,2046 snp148,2057 snp148,2103 snp148,2268 snp148Mult,1286 snp148Mult,1376 snp148Mult,1383 snp148Mult,1396 snp148Mult,2055 snp148Mult,2067 snp148Mult,2078 snp148Mult,2124 snp148Mult,2289 transMapEnsemblV5,166 transMapEstV5,135 transMapRefSeqV5,135 transMapRnaV5,135 transMapV5,241 ucscToINSDC,8 ucscToINSDC,31 ucscToINSDC,42 ucscToRefSeq,26 ucscToRefSeq,36 xenoRefGene,353 xenoRefGene,374 xenoRefGene,387 databases est,613 est,739 intronEst,102 intronEst,694 intronEst,823 mrna,456 transMapEnsemblV5,696 transMapEstV5,665 transMapRefSeqV5,665 transMapRnaV5,665 transMapV5,771 david chainEquCab2,967 chainHg38,967 chainMm10,967 chainNetEquCab2,970 chainNetHg38,970 chainNetMm10,970 chainNetRn6,973 chainRn6,970 netEquCab2,967 netHg38,967 netMm10,967 netRn6,970 davis transMapEnsemblV5,725 transMapEstV5,694 transMapRefSeqV5,694 transMapRnaV5,694 transMapV5,800 dbsnp snp148,7 snp148,34 snp148,280 snp148,295 snp148,431 snp148,522 snp148,533 snp148,545 snp148,557 snp148,570 snp148,598 snp148,635 snp148,659 snp148,689 snp148,708 snp148,719 snp148,730 snp148,750 snp148,770 snp148,1058 snp148,1079 snp148,1109 snp148,1122 snp148,1143 snp148,1235 snp148,1240 snp148,1481 snp148,1517 snp148,1529 snp148,1547 snp148,1621 snp148,1658 snp148,1685 snp148,1832 snp148,1891 snp148,1914 snp148,1925 snp148,1953 snp148,2080 snp148,2106 snp148,2165 snp148,2265 snp148Mult,7 snp148Mult,44 snp148Mult,122 snp148Mult,301 snp148Mult,316 snp148Mult,452 snp148Mult,543 snp148Mult,554 snp148Mult,566 snp148Mult,578 snp148Mult,591 snp148Mult,619 snp148Mult,656 snp148Mult,680 snp148Mult,710 snp148Mult,729 snp148Mult,740 snp148Mult,751 snp148Mult,771 snp148Mult,791 snp148Mult,1079 snp148Mult,1100 snp148Mult,1130 snp148Mult,1143 snp148Mult,1164 snp148Mult,1256 snp148Mult,1261 snp148Mult,1502 snp148Mult,1538 snp148Mult,1550 snp148Mult,1568 snp148Mult,1642 snp148Mult,1679 snp148Mult,1706 snp148Mult,1853 snp148Mult,1912 snp148Mult,1935 snp148Mult,1946 snp148Mult,1974 snp148Mult,2101 snp148Mult,2127 snp148Mult,2186 snp148Mult,2286 dbsnp_bitfield_v5.pdf snp148,1245 snp148,2172 snp148Mult,1266 snp148Mult,2193 de augustusGene,304 geneid,39 sgpGene,48 transMapEnsemblV5,772 transMapEstV5,741 transMapRefSeqV5,741 transMapRnaV5,741 transMapV5,847 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec chainHg38,4 chainHg38,66 chainHg38,300 chainMm10,4 chainMm10,66 chainMm10,300 chainNetHg38,5 chainNetHg38,69 chainNetHg38,303 chainNetHg38Viewchain,3 chainNetHg38Viewnet,3 chainNetMm10,5 chainNetMm10,69 chainNetMm10,303 chainNetMm10Viewchain,3 chainNetMm10Viewnet,3 gap,16 gold,18 nestedRepeats,389 nestedRepeats,411 netHg38,4 netHg38,66 netHg38,300 netMm10,4 netMm10,66 netMm10,300 rmsk,412 rmsk,434 transMapEnsemblV5,747 transMapEnsemblV5,813 transMapEstV5,716 transMapEstV5,782 transMapRefSeqV5,716 transMapRefSeqV5,782 transMapRnaV5,716 transMapRnaV5,782 transMapV5,822 transMapV5,888 deemed sgpGene,88 default chainEquCab2,312 chainHg38,312 chainMm10,312 chainNetEquCab2,315 chainNetHg38,315 chainNetMm10,315 chainNetRn6,318 chainRn6,315 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netEquCab2,312 netHg38,312 netMm10,312 netRn6,315 refGene,136 refGene,229 snp148,71 snp148,793 snp148Mult,111 snp148Mult,145 snp148Mult,814 xenoRefGene,102 xenoRefGene,195 defaults snp148,1584 snp148,1596 snp148Mult,1605 snp148Mult,1617 defining geneid,107 definition gap,40 gold,42 definitions snp148,480 snp148Mult,501 degraded est,528 intronEst,609 degree est,623 intronEst,704 deleted snp148,682 snp148Mult,703 deletion chainEquCab2,145 chainEquCab2,1054 chainHg38,145 chainHg38,1054 chainMm10,145 chainMm10,1054 chainNetEquCab2,148 chainNetEquCab2,1057 chainNetHg38,148 chainNetHg38,1057 chainNetMm10,148 chainNetMm10,1057 chainNetRn6,150 chainNetRn6,1060 chainRn6,147 chainRn6,1057 est,441 intronEst,522 mrna,380 netEquCab2,145 netEquCab2,1054 netHg38,145 netHg38,1054 netMm10,145 netMm10,1054 netRn6,147 netRn6,1057 rmsk,220 snp148,266 snp148,355 snp148,360 snp148,968 snp148,1092 snp148,1885 snp148Mult,287 snp148Mult,376 snp148Mult,381 snp148Mult,989 snp148Mult,1113 snp148Mult,1906 deletions chainEquCab2,113 chainEquCab2,176 chainHg38,113 chainHg38,176 chainMm10,113 chainMm10,176 chainNetEquCab2,116 chainNetEquCab2,179 chainNetHg38,116 chainNetHg38,179 chainNetMm10,116 chainNetMm10,179 chainNetRn6,118 chainNetRn6,181 chainRn6,115 chainRn6,178 netEquCab2,113 netEquCab2,176 netHg38,113 netHg38,176 netMm10,113 netMm10,176 netRn6,115 netRn6,178 snp148,25 snp148,1831 snp148Mult,35 snp148Mult,1852 delivered gap,52 gold,51 dense est,59 gold,68 intronEst,143 mrna,40 nestedRepeats,157 nestedRepeats,168 dependencies genscan,184 depicts gold,72 windowmaskerSdust,15 deposited est,600 intronEst,681 derived chainEquCab2,757 chainHg38,757 chainMm10,757 chainNetEquCab2,760 chainNetHg38,760 chainNetMm10,760 chainNetRn6,763 chainRn6,760 netEquCab2,757 netHg38,757 netMm10,757 netRn6,760 described chainEquCab2,764 chainHg38,764 chainMm10,764 chainNetEquCab2,767 chainNetHg38,767 chainNetMm10,767 chainNetRn6,770 chainRn6,767 genscan,162 nestedRepeats,60 nestedRepeats,338 netEquCab2,764 netHg38,764 netMm10,764 netRn6,767 rmsk,96 rmsk,361 snp148,1519 snp148Mult,1540 describes augustusGene,227 gap,61 gold,60 snp148,243 snp148Mult,264 description augustusGene,13 chainEquCab2,12 chainEquCab2,769 chainHg38,12 chainHg38,769 chainMm10,12 chainMm10,769 chainNetEquCab2,15 chainNetEquCab2,772 chainNetHg38,15 chainNetHg38,772 chainNetMm10,15 chainNetMm10,772 chainNetRn6,16 chainNetRn6,775 chainRn6,13 chainRn6,772 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 est,11 est,110 gap,8 gc5BaseBw,12 geneid,11 genscan,11 genscan,78 genscan,134 gold,9 intronEst,13 intronEst,191 microsat,10 mrna,11 mrna,56 nestedRepeats,14 netEquCab2,12 netEquCab2,769 netHg38,12 netHg38,769 netMm10,12 netMm10,769 netRn6,13 netRn6,772 refGene,10 refGene,132 rmsk,9 sgpGene,15 simpleRepeat,11 snp148,12 snp148Mult,18 transMapEnsemblV5,15 transMapEnsemblV5,233 transMapEstV5,13 transMapEstV5,202 transMapRefSeqV5,14 transMapRefSeqV5,202 transMapRnaV5,14 transMapRnaV5,202 transMapV5,12 transMapV5,308 ucscToINSDC,14 ucscToRefSeq,9 windowmaskerSdust,12 xenoRefGene,11 xenoRefGene,98 descriptions augustusGene,92 designed geneid,62 desired est,286 intronEst,367 mrna,232 destination transMapEnsemblV5,415 transMapEstV5,384 transMapRefSeqV5,384 transMapRnaV5,384 transMapV5,490 destuniq transMapEnsemblV5,434 transMapEstV5,403 transMapRefSeqV5,403 transMapRnaV5,403 transMapV5,509 detail genscan,165 detailed augustusGene,91 chainEquCab2,455 chainEquCab2,474 chainHg38,455 chainHg38,474 chainMm10,455 chainMm10,474 chainNetEquCab2,458 chainNetEquCab2,477 chainNetHg38,458 chainNetHg38,477 chainNetMm10,458 chainNetMm10,477 chainNetRn6,461 chainNetRn6,480 chainRn6,458 chainRn6,477 nestedRepeats,70 netEquCab2,455 netEquCab2,474 netHg38,455 netHg38,474 netMm10,455 netMm10,474 netRn6,458 netRn6,477 rmsk,37 details rmsk,119 snp148,870 snp148,1247 snp148,1711 snp148,1741 snp148,1760 snp148,1944 snp148,2115 snp148,2174 snp148Mult,891 snp148Mult,1268 snp148Mult,1732 snp148Mult,1762 snp148Mult,1781 snp148Mult,1965 snp148Mult,2136 snp148Mult,2195 transMapEnsemblV5,235 transMapEstV5,204 transMapRefSeqV5,204 transMapRnaV5,204 transMapV5,310 determination transMapEnsemblV5,273 transMapEstV5,242 transMapRefSeqV5,242 transMapRnaV5,242 transMapV5,348 determine transMapV5,91 determined snp148,1912 snp148Mult,1933 windowmaskerSdust,19 determines snp148,1892 snp148Mult,1913 determining chainEquCab2,479 chainHg38,479 chainMm10,479 chainNetEquCab2,482 chainNetHg38,482 chainNetMm10,482 chainNetRn6,485 chainRn6,482 netEquCab2,479 netHg38,479 netMm10,479 netRn6,482 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed chainEquCab2,914 chainEquCab2,949 chainEquCab2,995 chainHg38,914 chainHg38,949 chainHg38,995 chainMm10,914 chainMm10,949 chainMm10,995 chainNetEquCab2,917 chainNetEquCab2,952 chainNetEquCab2,998 chainNetHg38,917 chainNetHg38,952 chainNetHg38,998 chainNetMm10,917 chainNetMm10,952 chainNetMm10,998 chainNetRn6,920 chainNetRn6,955 chainNetRn6,1001 chainRn6,917 chainRn6,952 chainRn6,998 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 geneid,21 netEquCab2,914 netEquCab2,949 netEquCab2,995 netHg38,914 netHg38,949 netHg38,995 netMm10,914 netMm10,949 netMm10,995 netRn6,917 netRn6,952 netRn6,998 sgpGene,28 dfam rmsk,112 di-nucleotide microsat,3 microsat,32 diekhans augustusGene,289 transMapEnsemblV5,681 transMapEnsemblV5,714 transMapEnsemblV5,757 transMapEnsemblV5,789 transMapEstV5,650 transMapEstV5,683 transMapEstV5,726 transMapEstV5,758 transMapRefSeqV5,650 transMapRefSeqV5,683 transMapRefSeqV5,726 transMapRefSeqV5,758 transMapRnaV5,650 transMapRnaV5,683 transMapRnaV5,726 transMapRnaV5,758 transMapV5,756 transMapV5,789 transMapV5,832 transMapV5,864 differ est,404 intronEst,485 snp148,1951 snp148Mult,1972 differences snp148,1718 snp148,1747 snp148Mult,1739 snp148Mult,1768 different augustusGene,40 augustusGene,86 augustusGene,97 augustusGene,145 augustusGene,156 augustusGene,180 augustusGene,194 chainEquCab2,554 chainHg38,554 chainMm10,554 chainNetEquCab2,557 chainNetHg38,557 chainNetMm10,557 chainNetRn6,560 chainRn6,557 gc5BaseBw,51 genscan,55 netEquCab2,554 netHg38,554 netMm10,554 netRn6,557 refGene,69 rmsk,149 snp148,632 snp148,912 snp148,1223 snp148,1434 snp148,1633 snp148Mult,653 snp148Mult,933 snp148Mult,1244 snp148Mult,1455 snp148Mult,1654 difficult transMapEnsemblV5,277 transMapEstV5,246 transMapRefSeqV5,246 transMapRnaV5,246 transMapV5,352 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 direction est,79 est,97 intronEst,160 intronEst,178 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 directory rmsk,134 discarded chainEquCab2,683 chainHg38,683 chainMm10,683 chainNetEquCab2,686 chainNetHg38,686 chainNetMm10,686 chainNetRn6,689 chainRn6,686 netEquCab2,683 netHg38,683 netMm10,683 netRn6,686 refGene,270 transMapEnsemblV5,381 transMapEstV5,350 transMapRefSeqV5,350 transMapRnaV5,350 transMapV5,456 xenoRefGene,236 discovered snp148,827 snp148,834 snp148Mult,848 snp148Mult,855 discovery transMapEnsemblV5,736 transMapEstV5,705 transMapRefSeqV5,705 transMapRnaV5,705 transMapV5,811 discussion nestedRepeats,364 rmsk,387 disease snp148,1276 snp148,1324 snp148Mult,1297 snp148Mult,1345 diseases simpleRepeat,54 display chainEquCab2,237 chainEquCab2,305 chainEquCab2,350 chainEquCab2,380 chainEquCab2,439 chainEquCab2,468 chainEquCab2,497 chainEquCab2,971 chainHg38,237 chainHg38,305 chainHg38,350 chainHg38,380 chainHg38,439 chainHg38,468 chainHg38,497 chainHg38,971 chainMm10,237 chainMm10,305 chainMm10,350 chainMm10,380 chainMm10,439 chainMm10,468 chainMm10,497 chainMm10,971 chainNetEquCab2,240 chainNetEquCab2,308 chainNetEquCab2,353 chainNetEquCab2,383 chainNetEquCab2,442 chainNetEquCab2,471 chainNetEquCab2,500 chainNetEquCab2,974 chainNetHg38,240 chainNetHg38,308 chainNetHg38,353 chainNetHg38,383 chainNetHg38,442 chainNetHg38,471 chainNetHg38,500 chainNetHg38,974 chainNetMm10,240 chainNetMm10,308 chainNetMm10,353 chainNetMm10,383 chainNetMm10,442 chainNetMm10,471 chainNetMm10,500 chainNetMm10,974 chainNetRn6,242 chainNetRn6,311 chainNetRn6,356 chainNetRn6,386 chainNetRn6,445 chainNetRn6,474 chainNetRn6,503 chainNetRn6,977 chainRn6,239 chainRn6,308 chainRn6,353 chainRn6,383 chainRn6,442 chainRn6,471 chainRn6,500 chainRn6,974 est,44 est,52 est,60 est,125 est,152 est,182 est,327 est,351 est,367 est,383 est,393 est,442 genscan,62 genscan,70 genscan,105 gold,131 intronEst,117 intronEst,128 intronEst,136 intronEst,144 intronEst,206 intronEst,233 intronEst,263 intronEst,408 intronEst,432 intronEst,448 intronEst,464 intronEst,474 intronEst,523 mrna,25 mrna,33 mrna,41 mrna,71 mrna,98 mrna,128 mrna,273 mrna,297 mrna,313 mrna,329 mrna,381 nestedRepeats,111 netEquCab2,237 netEquCab2,305 netEquCab2,350 netEquCab2,380 netEquCab2,439 netEquCab2,468 netEquCab2,497 netEquCab2,971 netHg38,237 netHg38,305 netHg38,350 netHg38,380 netHg38,439 netHg38,468 netHg38,497 netHg38,971 netMm10,237 netMm10,305 netMm10,350 netMm10,380 netMm10,439 netMm10,468 netMm10,497 netMm10,971 netRn6,239 netRn6,308 netRn6,353 netRn6,383 netRn6,442 netRn6,471 netRn6,500 netRn6,974 refGene,76 refGene,84 refGene,113 refGene,149 refGene,192 rmsk,135 rmsk,141 rmsk,212 snp148,100 snp148,146 snp148,237 snp148,1941 snp148,2112 snp148Mult,142 snp148Mult,167 snp148Mult,258 snp148Mult,1962 snp148Mult,2133 transMapEnsemblV5,92 transMapEnsemblV5,100 transMapEnsemblV5,113 transMapEstV5,61 transMapEstV5,69 transMapEstV5,82 transMapRefSeqV5,61 transMapRefSeqV5,69 transMapRefSeqV5,82 transMapRnaV5,61 transMapRnaV5,69 transMapRnaV5,82 transMapV5,167 transMapV5,175 transMapV5,188 xenoRefGene,42 xenoRefGene,50 xenoRefGene,79 xenoRefGene,115 xenoRefGene,158 displayed chainEquCab2,416 chainEquCab2,513 chainEquCab2,688 chainHg38,416 chainHg38,513 chainHg38,688 chainMm10,416 chainMm10,513 chainMm10,688 chainNetEquCab2,419 chainNetEquCab2,516 chainNetEquCab2,691 chainNetHg38,419 chainNetHg38,516 chainNetHg38,691 chainNetMm10,419 chainNetMm10,516 chainNetMm10,691 chainNetRn6,422 chainNetRn6,519 chainNetRn6,694 chainRn6,419 chainRn6,516 chainRn6,691 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 gc5BaseBw,55 intronEst,802 nestedRepeats,124 nestedRepeats,217 netEquCab2,416 netEquCab2,513 netEquCab2,688 netHg38,416 netHg38,513 netHg38,688 netMm10,416 netMm10,513 netMm10,688 netRn6,419 netRn6,516 netRn6,691 refGene,237 snp148,168 snp148,192 snp148,200 snp148,1736 snp148Mult,189 snp148Mult,213 snp148Mult,221 snp148Mult,1757 xenoRefGene,203 displays chainEquCab2,120 chainHg38,120 chainMm10,120 chainNetEquCab2,123 chainNetHg38,123 chainNetMm10,123 chainNetRn6,125 chainRn6,122 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 netEquCab2,120 netHg38,120 netMm10,120 netRn6,122 rmsk,145 simpleRepeat,14 snp148,1713 snp148,1907 snp148Mult,1734 snp148Mult,1928 disruption snp148,669 snp148Mult,690 dissertation augustusGene,106 distance sgpGene,95 transMapEnsemblV5,220 transMapEstV5,189 transMapRefSeqV5,189 transMapRnaV5,189 transMapV5,295 distances transMapEnsemblV5,71 transMapEstV5,40 transMapRefSeqV5,40 transMapRnaV5,40 transMapV5,39 distant est,583 intronEst,664 transMapEnsemblV5,269 transMapEstV5,238 transMapRefSeqV5,238 transMapRnaV5,238 transMapV5,64 transMapV5,344 distinct snp148,895 snp148,1672 snp148Mult,916 snp148Mult,1693 distinguish cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,85 distributions augustusGene,84 genscan,43 diverged chainEquCab2,906 chainHg38,906 chainMm10,906 chainNetEquCab2,909 chainNetHg38,909 chainNetMm10,909 chainNetRn6,912 chainRn6,909 nestedRepeats,212 netEquCab2,906 netHg38,906 netMm10,906 netRn6,909 transMapV5,152 dj est,753 est,777 intronEst,837 intronEst,861 mrna,470 mrna,494 dl est,781 intronEst,865 mrna,498 dna chainEquCab2,1015 chainHg38,1015 chainMm10,1015 chainNetEquCab2,1018 chainNetHg38,1018 chainNetMm10,1018 chainNetRn6,1021 chainRn6,1018 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 geneid,120 genscan,220 microsat,123 nestedRepeats,33 nestedRepeats,41 netEquCab2,1015 netHg38,1015 netMm10,1015 netRn6,1018 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 snp148,877 snp148,1502 snp148,1508 snp148Mult,898 snp148Mult,1523 snp148Mult,1529 transMapEnsemblV5,318 transMapEstV5,287 transMapRefSeqV5,287 transMapRnaV5,287 transMapV5,393 doc rmsk,132 document gap,58 gold,57 snp148,2171 snp148Mult,2192 documentation gap,30 gold,32 does snp148,700 snp148,1072 snp148,1123 snp148,1206 snp148,1267 snp148,1469 snp148,1916 snp148Mult,721 snp148Mult,1093 snp148Mult,1144 snp148Mult,1227 snp148Mult,1288 snp148Mult,1490 snp148Mult,1937 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 done augustusGene,266 augustusGene,282 donor genscan,32 double chainEquCab2,128 chainEquCab2,157 chainHg38,128 chainHg38,157 chainMm10,128 chainMm10,157 chainNetEquCab2,131 chainNetEquCab2,160 chainNetHg38,131 chainNetHg38,160 chainNetMm10,131 chainNetMm10,160 chainNetRn6,133 chainNetRn6,162 chainRn6,130 chainRn6,159 netEquCab2,128 netEquCab2,157 netHg38,128 netHg38,157 netMm10,128 netMm10,157 netRn6,130 netRn6,159 double-lined chainEquCab2,217 chainHg38,217 chainMm10,217 chainNetEquCab2,220 chainNetHg38,220 chainNetMm10,220 chainNetRn6,222 chainRn6,219 netEquCab2,217 netHg38,217 netMm10,217 netRn6,219 double-sided chainEquCab2,102 chainHg38,102 chainMm10,102 chainNetEquCab2,105 chainNetHg38,105 chainNetMm10,105 chainNetRn6,107 chainRn6,104 netEquCab2,102 netHg38,102 netMm10,102 netRn6,104 download transMapEnsemblV5,558 transMapEstV5,527 transMapRefSeqV5,527 transMapRnaV5,527 transMapV5,633 downloaded snp148,2042 snp148,2050 snp148,2065 snp148,2218 snp148Mult,2063 snp148Mult,2071 snp148Mult,2086 snp148Mult,2239 transMapEnsemblV5,555 transMapEnsemblV5,624 transMapEstV5,524 transMapEstV5,593 transMapRefSeqV5,524 transMapRefSeqV5,593 transMapRnaV5,524 transMapRnaV5,593 transMapV5,630 transMapV5,699 ucscToINSDC,37 ucscToRefSeq,31 downloading transMapEnsemblV5,634 transMapEstV5,603 transMapRefSeqV5,603 transMapRnaV5,603 transMapV5,709 downloads rmsk,76 snp148,2221 snp148Mult,2242 downstream_gene_variant snp148,536 snp148,796 snp148Mult,557 snp148Mult,817 dr refGene,400 xenoRefGene,365 drastically intronEst,104 drawn gap,108 gold,127 drosophila augustusGene,214 geneid,188 due chainEquCab2,142 chainEquCab2,210 chainEquCab2,222 chainHg38,142 chainHg38,210 chainHg38,222 chainMm10,142 chainMm10,210 chainMm10,222 chainNetEquCab2,145 chainNetEquCab2,213 chainNetEquCab2,225 chainNetHg38,145 chainNetHg38,213 chainNetHg38,225 chainNetMm10,145 chainNetMm10,213 chainNetMm10,225 chainNetRn6,147 chainNetRn6,215 chainNetRn6,227 chainRn6,144 chainRn6,212 chainRn6,224 netEquCab2,142 netEquCab2,210 netEquCab2,222 netHg38,142 netHg38,210 netHg38,222 netMm10,142 netMm10,210 netMm10,222 netRn6,144 netRn6,212 netRn6,224 dump snp148,2035 snp148,2047 snp148Mult,2056 snp148Mult,2068 duplicate snp148,910 snp148Mult,931 duplicateobserved snp148,892 snp148Mult,913 duplication chainEquCab2,1053 chainHg38,1053 chainMm10,1053 chainNetEquCab2,1056 chainNetHg38,1056 chainNetMm10,1056 chainNetRn6,1059 chainRn6,1056 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netEquCab2,1053 netHg38,1053 netMm10,1053 netRn6,1056 duplications transMapEnsemblV5,311 transMapEnsemblV5,508 transMapEstV5,280 transMapEstV5,477 transMapRefSeqV5,280 transMapRefSeqV5,477 transMapRnaV5,280 transMapRnaV5,477 transMapV5,386 transMapV5,583 during chainEquCab2,811 chainHg38,811 chainMm10,811 chainNetEquCab2,814 chainNetHg38,814 chainNetMm10,814 chainNetRn6,817 chainRn6,814 netEquCab2,811 netHg38,811 netMm10,811 netRn6,814 dynamic chainEquCab2,644 chainHg38,644 chainMm10,644 chainNetEquCab2,647 chainNetHg38,647 chainNetMm10,647 chainNetRn6,650 chainRn6,647 netEquCab2,644 netHg38,644 netMm10,644 netRn6,647 e geneid,157 geneid,182 e.g chainEquCab2,367 chainHg38,367 chainMm10,367 chainNetEquCab2,370 chainNetHg38,370 chainNetMm10,370 chainNetRn6,373 chainRn6,370 netEquCab2,367 netHg38,367 netMm10,367 netRn6,370 snp148,306 snp148,1064 snp148,1622 snp148Mult,327 snp148Mult,1085 snp148Mult,1643 e247 transMapEnsemblV5,816 transMapEstV5,785 transMapRefSeqV5,785 transMapRnaV5,785 transMapV5,891 each chainEquCab2,255 chainHg38,255 chainMm10,255 chainNetEquCab2,258 chainNetHg38,258 chainNetMm10,258 chainNetRn6,260 chainRn6,257 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 est,215 genscan,100 intronEst,296 mrna,161 nestedRepeats,120 netEquCab2,255 netHg38,255 netMm10,255 netRn6,257 snp148,380 snp148,1984 snp148Mult,401 snp148Mult,2005 transMapEnsemblV5,387 transMapEnsemblV5,401 transMapEnsemblV5,410 transMapEnsemblV5,429 transMapEstV5,356 transMapEstV5,370 transMapEstV5,379 transMapEstV5,398 transMapRefSeqV5,356 transMapRefSeqV5,370 transMapRefSeqV5,379 transMapRefSeqV5,398 transMapRnaV5,356 transMapRnaV5,370 transMapRnaV5,379 transMapRnaV5,398 transMapV5,462 transMapV5,476 transMapV5,485 transMapV5,504 editors genscan,196 effect est,598 intronEst,679 snp148,435 snp148Mult,456 either chainEquCab2,125 chainHg38,125 chainMm10,125 chainNetEquCab2,128 chainNetHg38,128 chainNetMm10,128 chainNetRn6,130 chainRn6,127 gap,87 netEquCab2,125 netHg38,125 netMm10,125 netRn6,127 rmsk,273 snp148,905 snp148Mult,926 electronic nestedRepeats,348 rmsk,371 element rmsk,228 elements nestedRepeats,352 nestedRepeats,380 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 eliminate est,670 intronEst,751 eliminating intronEst,110 elongated snp148,657 snp148Mult,678 elsevier genscan,203 em snp148,2262 snp148Mult,2283 windowmaskerSdust,93 emerged chainEquCab2,817 chainHg38,817 chainMm10,817 chainNetEquCab2,820 chainNetHg38,820 chainNetMm10,820 chainNetRn6,823 chainRn6,820 est,568 intronEst,649 netEquCab2,817 netHg38,817 netMm10,817 netRn6,820 enables snp148Mult,134 encoded snp148,519 snp148Mult,540 encodes snp148,629 snp148Mult,650 end est,518 est,536 est,546 est,587 intronEst,599 intronEst,617 intronEst,627 intronEst,668 rmsk,245 snp148,746 snp148,766 snp148Mult,767 snp148Mult,787 transMapEnsemblV5,671 transMapEstV5,640 transMapRefSeqV5,640 transMapRnaV5,640 transMapV5,746 ends intronEst,91 ensembl snp148,1624 snp148Mult,1645 transMapEnsemblV5,2 transMapEnsemblV5,4 transMapEnsemblV5,21 transMapEnsemblV5,41 transMapEnsemblV5,48 transMapEnsemblV5,59 transMapEnsemblV5,590 transMapEnsemblV5,706 transMapEstV5,559 transMapEstV5,675 transMapRefSeqV5,559 transMapRefSeqV5,675 transMapRnaV5,559 transMapRnaV5,675 transMapV5,665 transMapV5,781 ensure transMapEnsemblV5,383 transMapEstV5,352 transMapRefSeqV5,352 transMapRnaV5,352 transMapV5,458 enter chainEquCab2,361 chainHg38,361 chainMm10,361 chainNetEquCab2,364 chainNetHg38,364 chainNetMm10,364 chainNetRn6,367 chainRn6,364 netEquCab2,361 netHg38,361 netMm10,361 netRn6,364 entered est,252 est,262 intronEst,333 intronEst,343 mrna,198 mrna,208 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 windowmaskerSdust,37 equcab2 chainEquCab2,7 chainEquCab2,69 chainEquCab2,303 chainNetEquCab2,8 chainNetEquCab2,72 chainNetEquCab2,306 chainNetEquCab2Viewchain,6 chainNetEquCab2Viewnet,6 netEquCab2,7 netEquCab2,69 netEquCab2,303 ermolaeva refGene,363 xenoRefGene,328 error snp148,1527 snp148Mult,1548 especially est,153 intronEst,234 mrna,99 est est,9 est,85 est,181 est,449 est,612 est,633 est,684 est,730 intronEst,11 intronEst,61 intronEst,76 intronEst,101 intronEst,126 intronEst,166 intronEst,262 intronEst,530 intronEst,693 intronEst,714 intronEst,765 intronEst,814 mrna,9 transMapEnsemblV5,687 transMapEstV5,4 transMapEstV5,19 transMapEstV5,656 transMapRefSeqV5,656 transMapRnaV5,656 transMapV5,762 ests est,2 est,4 est,21 est,27 est,191 est,296 est,311 est,352 est,370 est,488 est,533 est,544 est,645 est,672 intronEst,2 intronEst,4 intronEst,23 intronEst,39 intronEst,114 intronEst,120 intronEst,154 intronEst,272 intronEst,377 intronEst,392 intronEst,433 intronEst,451 intronEst,569 intronEst,614 intronEst,625 intronEst,726 intronEst,753 transMapEnsemblV5,177 transMapEnsemblV5,599 transMapEstV5,2 transMapEstV5,146 transMapEstV5,568 transMapRefSeqV5,146 transMapRefSeqV5,568 transMapRnaV5,146 transMapRnaV5,568 transMapV5,252 transMapV5,674 et cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 refGene,373 transMapEnsemblV5,733 transMapEstV5,702 transMapRefSeqV5,702 transMapRnaV5,702 transMapV5,808 xenoRefGene,338 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 even est,607 est,614 intronEst,688 intronEst,695 every chainEquCab2,270 chainHg38,270 chainMm10,270 chainNetEquCab2,273 chainNetHg38,273 chainNetMm10,273 chainNetRn6,275 chainRn6,272 netEquCab2,270 netHg38,270 netMm10,270 netRn6,272 evidence intronEst,64 evolution chainEquCab2,1050 chainHg38,1050 chainMm10,1050 chainNetEquCab2,1053 chainNetHg38,1053 chainNetMm10,1053 chainNetRn6,1056 chainRn6,1053 netEquCab2,1050 netHg38,1050 netMm10,1050 netRn6,1053 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 sgpGene,94 transMapEnsemblV5,70 transMapEstV5,39 transMapRefSeqV5,39 transMapRnaV5,39 transMapV5,38 ew est,757 intronEst,841 mrna,474 ewing transMapEnsemblV5,727 transMapEstV5,696 transMapRefSeqV5,696 transMapRnaV5,696 transMapV5,802 example est,184 est,237 intronEst,265 intronEst,318 mrna,130 mrna,183 rmsk,256 snp148,2240 snp148Mult,2261 transMapEnsemblV5,446 transMapEnsemblV5,658 transMapEstV5,415 transMapEstV5,627 transMapRefSeqV5,415 transMapRefSeqV5,627 transMapRnaV5,415 transMapRnaV5,627 transMapV5,97 transMapV5,521 transMapV5,733 exceed snp148,1536 snp148Mult,1557 except snp148,1590 snp148,1790 snp148Mult,1611 snp148Mult,1811 exclude est,132 est,337 est,343 intronEst,213 intronEst,418 intronEst,424 mrna,78 mrna,283 mrna,289 excluded snp148,1570 snp148Mult,1591 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 exist chainEquCab2,400 chainHg38,400 chainMm10,400 chainNetEquCab2,403 chainNetHg38,403 chainNetMm10,403 chainNetRn6,406 chainRn6,403 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,97 netEquCab2,400 netHg38,400 netMm10,400 netRn6,403 exon augustusGene,87 exons chainEquCab2,48 chainHg38,48 chainMm10,48 chainNetEquCab2,51 chainNetHg38,51 chainNetMm10,51 chainNetRn6,52 chainRn6,49 geneid,90 geneid,96 geneid,127 geneid,142 genscan,45 netEquCab2,48 netHg38,48 netMm10,48 netRn6,49 transMapEnsemblV5,740 transMapEstV5,709 transMapRefSeqV5,709 transMapRnaV5,709 transMapV5,815 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expense intronEst,108 transMapEnsemblV5,296 transMapEstV5,265 transMapRefSeqV5,265 transMapRnaV5,265 transMapV5,371 explanation gc5BaseBw,67 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 snp148,2198 snp148Mult,2219 expressed est,18 est,192 intronEst,20 intronEst,273 mrna,138 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extra transMapEnsemblV5,550 transMapEstV5,519 transMapRefSeqV5,519 transMapRnaV5,519 transMapV5,625 extracted nestedRepeats,23 snp148,1238 snp148,2032 snp148,2153 snp148Mult,1259 snp148Mult,2053 snp148Mult,2174 f chainEquCab2,1023 chainHg38,1023 chainMm10,1023 chainNetEquCab2,1026 chainNetHg38,1026 chainNetMm10,1026 chainNetRn6,1029 chainRn6,1026 gold,155 netEquCab2,1023 netHg38,1023 netMm10,1023 netRn6,1026 refGene,360 xenoRefGene,325 facilitate genscan,107 factor est,229 intronEst,310 mrna,175 family rmsk,249 faq augustusGene,46 genscan,61 nestedRepeats,298 refGene,75 rmsk,321 snp148,2246 snp148Mult,2267 transMapEnsemblV5,577 transMapEstV5,546 transMapRefSeqV5,546 transMapRnaV5,546 transMapV5,652 farrell refGene,365 xenoRefGene,330 fasta snp148,2040 snp148,2062 snp148Mult,2061 snp148Mult,2083 feature chainEquCab2,241 chainHg38,241 chainMm10,241 chainNetEquCab2,244 chainNetHg38,244 chainNetMm10,244 chainNetRn6,246 chainRn6,243 est,387 genscan,130 intronEst,468 mrna,333 netEquCab2,241 netHg38,241 netMm10,241 netRn6,243 refGene,180 refGene,213 transMapEnsemblV5,117 transMapEstV5,86 transMapRefSeqV5,86 transMapRnaV5,86 transMapV5,192 xenoRefGene,146 xenoRefGene,179 features refGene,116 transMapEnsemblV5,652 transMapEstV5,621 transMapRefSeqV5,621 transMapRnaV5,621 transMapV5,727 xenoRefGene,82 fed chainEquCab2,610 chainHg38,610 chainMm10,610 chainNetEquCab2,613 chainNetHg38,613 chainNetMm10,613 chainNetRn6,616 chainRn6,613 netEquCab2,610 netHg38,610 netMm10,610 netRn6,613 feedback refGene,42 fewer transMapV5,160 ffer windowmaskerSdust,96 field augustusGene,121 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 gap,51 gap,67 gold,50 gold,66 windowmaskerSdust,77 files snp148,2036 snp148,2041 snp148,2048 snp148,2063 snp148,2181 snp148Mult,2057 snp148Mult,2062 snp148Mult,2069 snp148Mult,2084 snp148Mult,2202 transMapEnsemblV5,545 transMapEnsemblV5,579 transMapEstV5,514 transMapEstV5,548 transMapRefSeqV5,514 transMapRefSeqV5,548 transMapRnaV5,514 transMapRnaV5,548 transMapV5,620 transMapV5,654 fill chainEquCab2,841 chainEquCab2,874 chainHg38,841 chainHg38,874 chainMm10,841 chainMm10,874 chainNetEquCab2,844 chainNetEquCab2,877 chainNetHg38,844 chainNetHg38,877 chainNetMm10,844 chainNetMm10,877 chainNetRn6,847 chainNetRn6,880 chainRn6,844 chainRn6,877 netEquCab2,841 netEquCab2,874 netHg38,841 netHg38,874 netMm10,841 netMm10,874 netRn6,844 netRn6,877 filled chainEquCab2,409 chainEquCab2,428 chainEquCab2,823 chainEquCab2,896 chainHg38,409 chainHg38,428 chainHg38,823 chainHg38,896 chainMm10,409 chainMm10,428 chainMm10,823 chainMm10,896 chainNetEquCab2,412 chainNetEquCab2,431 chainNetEquCab2,826 chainNetEquCab2,899 chainNetHg38,412 chainNetHg38,431 chainNetHg38,826 chainNetHg38,899 chainNetMm10,412 chainNetMm10,431 chainNetMm10,826 chainNetMm10,899 chainNetRn6,415 chainNetRn6,434 chainNetRn6,829 chainNetRn6,902 chainRn6,412 chainRn6,431 chainRn6,826 chainRn6,899 netEquCab2,409 netEquCab2,428 netEquCab2,823 netEquCab2,896 netHg38,409 netHg38,428 netHg38,823 netHg38,896 netMm10,409 netMm10,428 netMm10,823 netMm10,896 netRn6,412 netRn6,431 netRn6,826 netRn6,899 filter chainEquCab2,373 chainHg38,373 chainMm10,373 chainNetEquCab2,376 chainNetHg38,376 chainNetMm10,376 chainNetRn6,379 chainRn6,376 est,117 est,166 est,179 est,188 est,235 est,276 est,300 est,318 est,356 est,374 genscan,83 intronEst,198 intronEst,247 intronEst,260 intronEst,269 intronEst,316 intronEst,357 intronEst,381 intronEst,399 intronEst,437 intronEst,455 mrna,63 mrna,112 mrna,125 mrna,134 mrna,181 mrna,222 mrna,246 mrna,264 mrna,302 mrna,320 netEquCab2,373 netHg38,373 netMm10,373 netRn6,376 snp148,1576 snp148Mult,161 snp148Mult,1597 filtered est,339 intronEst,420 mrna,285 snp148,234 snp148Mult,255 transMapEnsemblV5,78 transMapEnsemblV5,350 transMapEstV5,47 transMapEstV5,319 transMapRefSeqV5,47 transMapRefSeqV5,319 transMapRnaV5,47 transMapRnaV5,319 transMapV5,46 transMapV5,425 filtering est,278 intronEst,359 mrna,224 snp148,1511 snp148Mult,1532 transMapEnsemblV5,237 transMapEnsemblV5,305 transMapEstV5,206 transMapEstV5,274 transMapRefSeqV5,206 transMapRefSeqV5,274 transMapRnaV5,206 transMapRnaV5,274 transMapV5,312 transMapV5,380 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 finally geneid,121 find chainEquCab2,653 chainHg38,653 chainMm10,653 chainNetEquCab2,656 chainNetHg38,656 chainNetMm10,656 chainNetRn6,659 chainRn6,656 netEquCab2,653 netHg38,653 netMm10,653 netRn6,656 rmsk,117 snp148,822 snp148Mult,843 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 snp148,2002 snp148Mult,2023 finding augustusGene,307 chainEquCab2,280 chainHg38,280 chainMm10,280 chainNetEquCab2,283 chainNetHg38,283 chainNetMm10,283 chainNetRn6,285 chainRn6,282 netEquCab2,280 netHg38,280 netMm10,280 netRn6,282 transMapEnsemblV5,775 transMapEstV5,744 transMapRefSeqV5,744 transMapRnaV5,744 transMapV5,850 finds transMapV5,159 finished gold,157 transMapEnsemblV5,361 transMapEstV5,330 transMapRefSeqV5,330 transMapRnaV5,330 transMapV5,436 first chainEquCab2,781 chainHg38,781 chainMm10,781 chainNetEquCab2,784 chainNetHg38,784 chainNetMm10,784 chainNetRn6,787 chainRn6,784 geneid,69 netEquCab2,781 netHg38,781 netMm10,781 netRn6,784 fish augustusGene,202 fit chainEquCab2,801 chainHg38,801 chainMm10,801 chainNetEquCab2,804 chainNetHg38,804 chainNetMm10,804 chainNetRn6,807 chainRn6,804 nestedRepeats,175 netEquCab2,801 netHg38,801 netMm10,801 netRn6,804 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 flanking snp148,105 snp148,924 snp148,942 snp148,954 snp148,984 snp148,1012 snp148,1171 snp148,1195 snp148,1889 snp148,1901 snp148,1933 snp148,1977 snp148,1989 snp148Mult,74 snp148Mult,945 snp148Mult,963 snp148Mult,975 snp148Mult,1005 snp148Mult,1033 snp148Mult,1192 snp148Mult,1216 snp148Mult,1910 snp148Mult,1922 snp148Mult,1954 snp148Mult,1998 snp148Mult,2010 flankmismatchgenomeequal snp148,916 snp148Mult,937 flankmismatchgenomelonger snp148,917 snp148Mult,938 flankmismatchgenomeshorter snp148,918 snp148Mult,939 fly augustusGene,215 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following chainEquCab2,662 chainHg38,662 chainMm10,662 chainNetEquCab2,665 chainNetHg38,665 chainNetMm10,665 chainNetRn6,668 chainRn6,665 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,120 genscan,82 netEquCab2,662 netHg38,662 netMm10,662 netRn6,665 transMapEnsemblV5,587 transMapEstV5,556 transMapRefSeqV5,556 transMapRnaV5,556 transMapV5,662 windowmaskerSdust,56 follows est,50 genscan,68 intronEst,134 mrna,31 refGene,82 transMapEnsemblV5,98 transMapEnsemblV5,215 transMapEstV5,67 transMapEstV5,184 transMapRefSeqV5,67 transMapRefSeqV5,184 transMapRnaV5,67 transMapRnaV5,184 transMapV5,173 transMapV5,290 xenoRefGene,48 for augustusGene,35 augustusGene,53 augustusGene,69 augustusGene,81 augustusGene,176 augustusGene,185 augustusGene,193 augustusGene,233 augustusGene,254 augustusGene,261 augustusGene,275 chainEquCab2,254 chainEquCab2,269 chainEquCab2,279 chainEquCab2,286 chainEquCab2,486 chainHg38,254 chainHg38,269 chainHg38,279 chainHg38,286 chainHg38,486 chainMm10,254 chainMm10,269 chainMm10,279 chainMm10,286 chainMm10,486 chainNetEquCab2,257 chainNetEquCab2,272 chainNetEquCab2,282 chainNetEquCab2,289 chainNetEquCab2,489 chainNetHg38,257 chainNetHg38,272 chainNetHg38,282 chainNetHg38,289 chainNetHg38,489 chainNetMm10,257 chainNetMm10,272 chainNetMm10,282 chainNetMm10,289 chainNetMm10,489 chainNetRn6,259 chainNetRn6,274 chainNetRn6,284 chainNetRn6,291 chainNetRn6,492 chainRn6,256 chainRn6,271 chainRn6,281 chainRn6,288 chainRn6,489 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 cytoBandIdeo,5 est,54 est,112 est,183 est,214 est,236 est,409 est,420 est,433 est,481 gc5BaseBw,65 geneid,118 geneid,151 genscan,50 genscan,72 genscan,125 genscan,132 genscan,175 intronEst,115 intronEst,138 intronEst,193 intronEst,264 intronEst,295 intronEst,317 intronEst,490 intronEst,501 intronEst,514 intronEst,562 microsat,95 mrna,35 mrna,58 mrna,129 mrna,160 mrna,182 mrna,346 mrna,359 mrna,372 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netEquCab2,254 netEquCab2,269 netEquCab2,279 netEquCab2,286 netEquCab2,486 netHg38,254 netHg38,269 netHg38,279 netHg38,286 netHg38,486 netMm10,254 netMm10,269 netMm10,279 netMm10,286 netMm10,486 netRn6,256 netRn6,271 netRn6,281 netRn6,288 netRn6,489 refGene,43 refGene,59 refGene,64 refGene,86 refGene,208 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 sgpGene,111 simpleRepeat,30 simpleRepeat,56 snp148,74 snp148,427 snp148,630 snp148,849 snp148,1045 snp148,1084 snp148,1113 snp148,1246 snp148,1299 snp148,1308 snp148,1328 snp148,1439 snp148,1528 snp148,1538 snp148,1940 snp148,2059 snp148,2073 snp148,2111 snp148,2139 snp148,2173 snp148,2184 snp148,2210 snp148,2237 snp148,2247 snp148Mult,114 snp148Mult,448 snp148Mult,651 snp148Mult,870 snp148Mult,1066 snp148Mult,1105 snp148Mult,1134 snp148Mult,1267 snp148Mult,1320 snp148Mult,1329 snp148Mult,1349 snp148Mult,1460 snp148Mult,1549 snp148Mult,1559 snp148Mult,1961 snp148Mult,2080 snp148Mult,2094 snp148Mult,2132 snp148Mult,2160 snp148Mult,2194 snp148Mult,2205 snp148Mult,2231 snp148Mult,2258 snp148Mult,2268 transMapEnsemblV5,42 transMapEnsemblV5,46 transMapEnsemblV5,68 transMapEnsemblV5,102 transMapEnsemblV5,130 transMapEnsemblV5,147 transMapEnsemblV5,190 transMapEnsemblV5,216 transMapEnsemblV5,234 transMapEnsemblV5,265 transMapEnsemblV5,267 transMapEnsemblV5,285 transMapEnsemblV5,289 transMapEnsemblV5,386 transMapEnsemblV5,400 transMapEnsemblV5,409 transMapEnsemblV5,445 transMapEnsemblV5,521 transMapEnsemblV5,536 transMapEnsemblV5,565 transMapEnsemblV5,629 transMapEnsemblV5,633 transMapEnsemblV5,657 transMapEnsemblV5,800 transMapEstV5,37 transMapEstV5,71 transMapEstV5,99 transMapEstV5,116 transMapEstV5,159 transMapEstV5,185 transMapEstV5,203 transMapEstV5,234 transMapEstV5,236 transMapEstV5,254 transMapEstV5,258 transMapEstV5,355 transMapEstV5,369 transMapEstV5,378 transMapEstV5,414 transMapEstV5,490 transMapEstV5,505 transMapEstV5,534 transMapEstV5,598 transMapEstV5,602 transMapEstV5,626 transMapEstV5,769 transMapRefSeqV5,37 transMapRefSeqV5,71 transMapRefSeqV5,99 transMapRefSeqV5,116 transMapRefSeqV5,159 transMapRefSeqV5,185 transMapRefSeqV5,203 transMapRefSeqV5,234 transMapRefSeqV5,236 transMapRefSeqV5,254 transMapRefSeqV5,258 transMapRefSeqV5,355 transMapRefSeqV5,369 transMapRefSeqV5,378 transMapRefSeqV5,414 transMapRefSeqV5,490 transMapRefSeqV5,505 transMapRefSeqV5,534 transMapRefSeqV5,598 transMapRefSeqV5,602 transMapRefSeqV5,626 transMapRefSeqV5,769 transMapRnaV5,37 transMapRnaV5,71 transMapRnaV5,99 transMapRnaV5,116 transMapRnaV5,159 transMapRnaV5,185 transMapRnaV5,203 transMapRnaV5,234 transMapRnaV5,236 transMapRnaV5,254 transMapRnaV5,258 transMapRnaV5,355 transMapRnaV5,369 transMapRnaV5,378 transMapRnaV5,414 transMapRnaV5,490 transMapRnaV5,505 transMapRnaV5,534 transMapRnaV5,598 transMapRnaV5,602 transMapRnaV5,626 transMapRnaV5,769 transMapV5,36 transMapV5,62 transMapV5,96 transMapV5,98 transMapV5,151 transMapV5,177 transMapV5,205 transMapV5,222 transMapV5,265 transMapV5,291 transMapV5,309 transMapV5,340 transMapV5,342 transMapV5,360 transMapV5,364 transMapV5,461 transMapV5,475 transMapV5,484 transMapV5,520 transMapV5,596 transMapV5,611 transMapV5,640 transMapV5,704 transMapV5,708 transMapV5,732 transMapV5,875 ucscToINSDC,46 ucscToRefSeq,40 windowmaskerSdust,35 windowmaskerSdust,86 windowmaskerSdust,103 xenoRefGene,20 xenoRefGene,52 xenoRefGene,174 format chainEquCab2,601 chainHg38,601 chainMm10,601 chainNetEquCab2,604 chainNetHg38,604 chainNetMm10,604 chainNetRn6,607 chainRn6,604 gap,63 gold,62 netEquCab2,601 netHg38,601 netMm10,601 netRn6,604 snp148,1112 snp148Mult,1133 transMapEnsemblV5,418 transMapEstV5,387 transMapRefSeqV5,387 transMapRnaV5,387 transMapV5,493 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainEquCab2,435 chainHg38,435 chainMm10,435 chainNetEquCab2,438 chainNetHg38,438 chainNetMm10,438 chainNetRn6,441 chainRn6,438 netEquCab2,435 netHg38,435 netMm10,435 netRn6,438 found augustusGene,101 gold,138 mrna,413 snp148,873 snp148Mult,894 transMapEnsemblV5,641 transMapEstV5,610 transMapRefSeqV5,610 transMapRnaV5,610 transMapV5,716 four chainEquCab2,503 chainHg38,503 chainMm10,503 chainNetEquCab2,506 chainNetHg38,506 chainNetMm10,506 chainNetRn6,509 chainRn6,506 netEquCab2,503 netHg38,503 netMm10,503 netRn6,506 snp148,1222 snp148Mult,1243 fragments est,40 gold,4 intronEst,52 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 frame snp148,674 snp148,704 snp148Mult,695 snp148Mult,725 frameshift snp148,691 snp148Mult,712 frameshift_variant snp148,662 snp148,806 snp148Mult,683 snp148Mult,827 frequencies snp148,876 snp148,1661 snp148,1689 snp148,2138 snp148,2144 snp148Mult,897 snp148Mult,1682 snp148Mult,1710 snp148Mult,2159 snp148Mult,2165 frequency snp148,391 snp148,400 snp148,887 snp148,1025 snp148,1402 snp148,1421 snp148Mult,412 snp148Mult,421 snp148Mult,908 snp148Mult,1046 snp148Mult,1423 snp148Mult,1442 from augustusGene,20 chainEquCab2,173 chainEquCab2,298 chainEquCab2,555 chainEquCab2,577 chainEquCab2,758 chainEquCab2,931 chainEquCab2,963 chainHg38,173 chainHg38,298 chainHg38,555 chainHg38,577 chainHg38,758 chainHg38,931 chainHg38,963 chainMm10,173 chainMm10,298 chainMm10,555 chainMm10,577 chainMm10,758 chainMm10,931 chainMm10,963 chainNetEquCab2,176 chainNetEquCab2,301 chainNetEquCab2,558 chainNetEquCab2,580 chainNetEquCab2,761 chainNetEquCab2,934 chainNetEquCab2,966 chainNetHg38,176 chainNetHg38,301 chainNetHg38,558 chainNetHg38,580 chainNetHg38,761 chainNetHg38,934 chainNetHg38,966 chainNetMm10,176 chainNetMm10,301 chainNetMm10,558 chainNetMm10,580 chainNetMm10,761 chainNetMm10,934 chainNetMm10,966 chainNetRn6,178 chainNetRn6,303 chainNetRn6,561 chainNetRn6,583 chainNetRn6,764 chainNetRn6,937 chainNetRn6,969 chainRn6,175 chainRn6,300 chainRn6,558 chainRn6,580 chainRn6,761 chainRn6,934 chainRn6,966 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 est,405 est,453 est,474 est,584 est,602 est,646 est,729 gap,48 geneid,17 geneid,93 geneid,122 genscan,16 gold,3 gold,47 intronEst,486 intronEst,534 intronEst,555 intronEst,665 intronEst,683 intronEst,727 intronEst,813 mrna,5 mrna,446 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netEquCab2,173 netEquCab2,298 netEquCab2,555 netEquCab2,577 netEquCab2,758 netEquCab2,931 netEquCab2,963 netHg38,173 netHg38,298 netHg38,555 netHg38,577 netHg38,758 netHg38,931 netHg38,963 netMm10,173 netMm10,298 netMm10,555 netMm10,577 netMm10,758 netMm10,931 netMm10,963 netRn6,175 netRn6,300 netRn6,558 netRn6,580 netRn6,761 netRn6,934 netRn6,966 refGene,23 refGene,200 refGene,319 rmsk,86 sgpGene,21 sgpGene,96 snp148,33 snp148,38 snp148,99 snp148,235 snp148,279 snp148,294 snp148,325 snp148,482 snp148,969 snp148,1057 snp148,1078 snp148,1108 snp148,1121 snp148,1142 snp148,1239 snp148,1456 snp148,1571 snp148,1692 snp148,1728 snp148,1952 snp148,2033 snp148,2043 snp148,2051 snp148,2066 snp148,2086 snp148,2099 snp148,2130 snp148,2148 snp148,2154 snp148,2219 snp148Mult,43 snp148Mult,48 snp148Mult,256 snp148Mult,300 snp148Mult,315 snp148Mult,346 snp148Mult,503 snp148Mult,990 snp148Mult,1078 snp148Mult,1099 snp148Mult,1129 snp148Mult,1142 snp148Mult,1163 snp148Mult,1260 snp148Mult,1477 snp148Mult,1592 snp148Mult,1713 snp148Mult,1749 snp148Mult,1973 snp148Mult,2054 snp148Mult,2064 snp148Mult,2072 snp148Mult,2087 snp148Mult,2107 snp148Mult,2120 snp148Mult,2151 snp148Mult,2169 snp148Mult,2175 snp148Mult,2240 transMapEnsemblV5,30 transMapEnsemblV5,158 transMapEnsemblV5,556 transMapEnsemblV5,619 transMapEnsemblV5,684 transMapEstV5,28 transMapEstV5,127 transMapEstV5,525 transMapEstV5,588 transMapEstV5,653 transMapRefSeqV5,28 transMapRefSeqV5,127 transMapRefSeqV5,525 transMapRefSeqV5,588 transMapRefSeqV5,653 transMapRnaV5,28 transMapRnaV5,127 transMapRnaV5,525 transMapRnaV5,588 transMapRnaV5,653 transMapV5,27 transMapV5,112 transMapV5,233 transMapV5,631 transMapV5,694 transMapV5,759 ucscToINSDC,26 ucscToINSDC,38 ucscToRefSeq,21 ucscToRefSeq,32 windowmaskerSdust,41 xenoRefGene,26 xenoRefGene,166 xenoRefGene,285 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 ftp snp148,2052 snp148,2067 snp148Mult,2073 snp148Mult,2088 windowmaskerSdust,44 ftp.ncbi.nih.gov snp148,39 snp148Mult,49 ftp.ncbi.nlm.nih.gov snp148,2053 snp148,2068 snp148Mult,2074 snp148Mult,2089 full chainEquCab2,235 chainEquCab2,379 chainHg38,235 chainHg38,379 chainMm10,235 chainMm10,379 chainNetEquCab2,238 chainNetEquCab2,382 chainNetHg38,238 chainNetHg38,382 chainNetMm10,238 chainNetMm10,382 chainNetRn6,240 chainNetRn6,385 chainRn6,237 chainRn6,382 nestedRepeats,118 netEquCab2,235 netEquCab2,379 netHg38,235 netHg38,379 netMm10,235 netMm10,379 netRn6,237 netRn6,382 rmsk,140 transMapEnsemblV5,53 transMapEnsemblV5,279 transMapEstV5,248 transMapRefSeqV5,248 transMapRnaV5,248 transMapV5,354 function snp148,430 snp148,783 snp148,1715 snp148,1744 snp148,1780 snp148,1783 snp148,1789 snp148,2108 snp148Mult,451 snp148Mult,804 snp148Mult,1736 snp148Mult,1765 snp148Mult,1801 snp148Mult,1804 snp148Mult,1810 snp148Mult,2129 functional snp148,434 snp148,470 snp148,502 snp148,1794 snp148,1818 snp148,2095 snp148Mult,455 snp148Mult,491 snp148Mult,523 snp148Mult,1815 snp148Mult,1839 snp148Mult,2116 furthermore augustusGene,65 future rmsk,272 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 gc5BaseBw,21 geneid,159 geneid,180 microsat,115 simpleRepeat,75 g-31-125100-114 chainHg38,670 chainMm10,670 chainNetHg38,673 chainNetMm10,673 chainNetRn6,676 chainRn6,673 netHg38,670 netMm10,670 netRn6,673 g-31-75100-111 chainEquCab2,670 chainNetEquCab2,673 netEquCab2,670 gambiae augustusGene,220 gap chainEquCab2,76 chainEquCab2,86 chainEquCab2,185 chainEquCab2,472 chainEquCab2,484 chainEquCab2,507 chainEquCab2,525 chainEquCab2,540 chainEquCab2,557 chainEquCab2,694 chainEquCab2,825 chainHg38,76 chainHg38,86 chainHg38,185 chainHg38,472 chainHg38,484 chainHg38,507 chainHg38,525 chainHg38,540 chainHg38,557 chainHg38,694 chainHg38,825 chainMm10,76 chainMm10,86 chainMm10,185 chainMm10,472 chainMm10,484 chainMm10,507 chainMm10,525 chainMm10,540 chainMm10,557 chainMm10,694 chainMm10,825 chainNetEquCab2,79 chainNetEquCab2,89 chainNetEquCab2,188 chainNetEquCab2,475 chainNetEquCab2,487 chainNetEquCab2,510 chainNetEquCab2,528 chainNetEquCab2,543 chainNetEquCab2,560 chainNetEquCab2,697 chainNetEquCab2,828 chainNetHg38,79 chainNetHg38,89 chainNetHg38,188 chainNetHg38,475 chainNetHg38,487 chainNetHg38,510 chainNetHg38,528 chainNetHg38,543 chainNetHg38,560 chainNetHg38,697 chainNetHg38,828 chainNetMm10,79 chainNetMm10,89 chainNetMm10,188 chainNetMm10,475 chainNetMm10,487 chainNetMm10,510 chainNetMm10,528 chainNetMm10,543 chainNetMm10,560 chainNetMm10,697 chainNetMm10,828 chainNetRn6,81 chainNetRn6,91 chainNetRn6,190 chainNetRn6,478 chainNetRn6,490 chainNetRn6,513 chainNetRn6,531 chainNetRn6,546 chainNetRn6,563 chainNetRn6,700 chainNetRn6,831 chainRn6,78 chainRn6,88 chainRn6,187 chainRn6,475 chainRn6,487 chainRn6,510 chainRn6,528 chainRn6,543 chainRn6,560 chainRn6,697 chainRn6,828 est,428 gap,1 gap,2 gap,91 gap,102 gap,115 intronEst,509 mrna,367 netEquCab2,76 netEquCab2,86 netEquCab2,185 netEquCab2,472 netEquCab2,484 netEquCab2,507 netEquCab2,525 netEquCab2,540 netEquCab2,557 netEquCab2,694 netEquCab2,825 netHg38,76 netHg38,86 netHg38,185 netHg38,472 netHg38,484 netHg38,507 netHg38,525 netHg38,540 netHg38,557 netHg38,694 netHg38,825 netMm10,76 netMm10,86 netMm10,185 netMm10,472 netMm10,484 netMm10,507 netMm10,525 netMm10,540 netMm10,557 netMm10,694 netMm10,825 netRn6,78 netRn6,88 netRn6,187 netRn6,475 netRn6,487 netRn6,510 netRn6,528 netRn6,543 netRn6,560 netRn6,697 netRn6,828 snp148,932 snp148Mult,953 transMapEnsemblV5,142 transMapEstV5,111 transMapRefSeqV5,111 transMapRnaV5,111 transMapV5,217 gapless chainEquCab2,637 chainHg38,637 chainMm10,637 chainNetEquCab2,640 chainNetHg38,640 chainNetMm10,640 chainNetRn6,643 chainRn6,640 netEquCab2,637 netHg38,637 netMm10,637 netRn6,640 gaps chainEquCab2,82 chainEquCab2,93 chainEquCab2,104 chainEquCab2,138 chainEquCab2,162 chainEquCab2,207 chainEquCab2,218 chainEquCab2,399 chainEquCab2,421 chainEquCab2,448 chainEquCab2,880 chainEquCab2,886 chainHg38,82 chainHg38,93 chainHg38,104 chainHg38,138 chainHg38,162 chainHg38,207 chainHg38,218 chainHg38,399 chainHg38,421 chainHg38,448 chainHg38,880 chainHg38,886 chainMm10,82 chainMm10,93 chainMm10,104 chainMm10,138 chainMm10,162 chainMm10,207 chainMm10,218 chainMm10,399 chainMm10,421 chainMm10,448 chainMm10,880 chainMm10,886 chainNetEquCab2,85 chainNetEquCab2,96 chainNetEquCab2,107 chainNetEquCab2,141 chainNetEquCab2,165 chainNetEquCab2,210 chainNetEquCab2,221 chainNetEquCab2,402 chainNetEquCab2,424 chainNetEquCab2,451 chainNetEquCab2,883 chainNetEquCab2,889 chainNetHg38,85 chainNetHg38,96 chainNetHg38,107 chainNetHg38,141 chainNetHg38,165 chainNetHg38,210 chainNetHg38,221 chainNetHg38,402 chainNetHg38,424 chainNetHg38,451 chainNetHg38,883 chainNetHg38,889 chainNetMm10,85 chainNetMm10,96 chainNetMm10,107 chainNetMm10,141 chainNetMm10,165 chainNetMm10,210 chainNetMm10,221 chainNetMm10,402 chainNetMm10,424 chainNetMm10,451 chainNetMm10,883 chainNetMm10,889 chainNetRn6,87 chainNetRn6,98 chainNetRn6,109 chainNetRn6,143 chainNetRn6,167 chainNetRn6,212 chainNetRn6,223 chainNetRn6,405 chainNetRn6,427 chainNetRn6,454 chainNetRn6,886 chainNetRn6,892 chainRn6,84 chainRn6,95 chainRn6,106 chainRn6,140 chainRn6,164 chainRn6,209 chainRn6,220 chainRn6,402 chainRn6,424 chainRn6,451 chainRn6,883 chainRn6,889 gap,13 gap,43 gap,68 gap,124 gap,126 gap,140 gold,96 netEquCab2,82 netEquCab2,93 netEquCab2,104 netEquCab2,138 netEquCab2,162 netEquCab2,207 netEquCab2,218 netEquCab2,399 netEquCab2,421 netEquCab2,448 netEquCab2,880 netEquCab2,886 netHg38,82 netHg38,93 netHg38,104 netHg38,138 netHg38,162 netHg38,207 netHg38,218 netHg38,399 netHg38,421 netHg38,448 netHg38,880 netHg38,886 netMm10,82 netMm10,93 netMm10,104 netMm10,138 netMm10,162 netMm10,207 netMm10,218 netMm10,399 netMm10,421 netMm10,448 netMm10,880 netMm10,886 netRn6,84 netRn6,95 netRn6,106 netRn6,140 netRn6,164 netRn6,209 netRn6,220 netRn6,402 netRn6,424 netRn6,451 netRn6,883 netRn6,889 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gbdb transMapEnsemblV5,662 transMapEstV5,631 transMapRefSeqV5,631 transMapRnaV5,631 transMapV5,737 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5BaseBw,1 gc5BaseBw,3 gc5BaseBw,14 gc5BaseBw,31 gen geneid,42 sgpGene,51 genbank est,23 est,647 est,758 est,782 intronEst,25 intronEst,728 intronEst,842 intronEst,866 mrna,6 mrna,21 mrna,385 mrna,475 mrna,499 transMapEnsemblV5,172 transMapEnsemblV5,175 transMapEstV5,17 transMapEstV5,141 transMapEstV5,144 transMapRefSeqV5,141 transMapRefSeqV5,144 transMapRnaV5,4 transMapRnaV5,18 transMapRnaV5,141 transMapRnaV5,144 transMapV5,247 transMapV5,250 gencode transMapEnsemblV5,6 transMapEnsemblV5,19 transMapEnsemblV5,39 transMapEnsemblV5,708 transMapEstV5,677 transMapRefSeqV5,677 transMapRnaV5,677 transMapV5,783 gene augustusGene,5 augustusGene,10 augustusGene,41 augustusGene,113 augustusGene,158 augustusGene,164 augustusGene,306 augustusGene,321 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 geneid,4 geneid,8 geneid,15 geneid,129 genscan,4 genscan,8 genscan,56 genscan,73 genscan,112 genscan,118 genscan,215 refGene,7 refGene,44 refGene,70 refGene,87 refGene,141 refGene,156 refGene,161 refGene,189 refGene,218 sgpGene,4 sgpGene,12 sgpGene,19 sgpGene,25 snp148,544 snp148,556 snp148,569 snp148,1382 snp148,1722 snp148,1726 snp148,1754 snp148Mult,565 snp148Mult,577 snp148Mult,590 snp148Mult,1403 snp148Mult,1743 snp148Mult,1747 snp148Mult,1775 transMapEnsemblV5,12 transMapEnsemblV5,54 transMapEnsemblV5,60 transMapEnsemblV5,391 transMapEnsemblV5,774 transMapEstV5,10 transMapEstV5,360 transMapEstV5,743 transMapRefSeqV5,5 transMapRefSeqV5,11 transMapRefSeqV5,19 transMapRefSeqV5,360 transMapRefSeqV5,743 transMapRnaV5,11 transMapRnaV5,360 transMapRnaV5,743 transMapV5,9 transMapV5,18 transMapV5,466 transMapV5,849 xenoRefGene,8 xenoRefGene,53 xenoRefGene,107 xenoRefGene,122 xenoRefGene,127 xenoRefGene,155 xenoRefGene,184 gene-rich gc5BaseBw,37 geneid geneid,1 geneid,3 geneid,19 geneid,51 geneid,164 geneid,186 sgpGene,68 general est,530 intronEst,611 generally rmsk,72 generate est,641 intronEst,722 nestedRepeats,261 nestedRepeats,320 rmsk,343 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 nestedRepeats,282 refGene,323 rmsk,289 xenoRefGene,289 generating augustusGene,190 genes augustusGene,8 augustusGene,45 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 est,43 geneid,2 geneid,6 geneid,57 geneid,167 genscan,2 genscan,6 genscan,60 intronEst,55 refGene,2 refGene,4 refGene,5 refGene,13 refGene,21 refGene,74 refGene,227 refGene,235 refGene,246 sgpGene,2 sgpGene,10 sgpGene,61 simpleRepeat,41 snp148,450 snp148,1764 snp148,1812 snp148Mult,471 snp148Mult,1785 snp148Mult,1833 transMapEnsemblV5,10 transMapEnsemblV5,89 transMapEnsemblV5,171 transMapEnsemblV5,185 transMapEnsemblV5,291 transMapEnsemblV5,804 transMapEstV5,8 transMapEstV5,58 transMapEstV5,140 transMapEstV5,154 transMapEstV5,260 transMapEstV5,773 transMapRefSeqV5,9 transMapRefSeqV5,58 transMapRefSeqV5,140 transMapRefSeqV5,154 transMapRefSeqV5,260 transMapRefSeqV5,773 transMapRnaV5,9 transMapRnaV5,58 transMapRnaV5,140 transMapRnaV5,154 transMapRnaV5,260 transMapRnaV5,773 transMapV5,7 transMapV5,59 transMapV5,73 transMapV5,246 transMapV5,260 transMapV5,366 transMapV5,879 xenoRefGene,5 xenoRefGene,6 xenoRefGene,19 xenoRefGene,193 xenoRefGene,201 xenoRefGene,212 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic nestedRepeats,52 rmsk,88 snp148,2270 snp148Mult,2291 genome augustusGene,32 chainEquCab2,19 chainEquCab2,73 chainEquCab2,202 chainEquCab2,275 chainEquCab2,288 chainEquCab2,779 chainEquCab2,1100 chainHg38,19 chainHg38,73 chainHg38,202 chainHg38,275 chainHg38,288 chainHg38,779 chainHg38,1100 chainMm10,19 chainMm10,73 chainMm10,202 chainMm10,275 chainMm10,288 chainMm10,779 chainMm10,1100 chainNetEquCab2,22 chainNetEquCab2,76 chainNetEquCab2,205 chainNetEquCab2,278 chainNetEquCab2,291 chainNetEquCab2,782 chainNetEquCab2,1103 chainNetHg38,22 chainNetHg38,76 chainNetHg38,205 chainNetHg38,278 chainNetHg38,291 chainNetHg38,782 chainNetHg38,1103 chainNetMm10,22 chainNetMm10,76 chainNetMm10,205 chainNetMm10,278 chainNetMm10,291 chainNetMm10,782 chainNetMm10,1103 chainNetRn6,23 chainNetRn6,78 chainNetRn6,207 chainNetRn6,280 chainNetRn6,293 chainNetRn6,785 chainNetRn6,1106 chainRn6,20 chainRn6,75 chainRn6,204 chainRn6,277 chainRn6,290 chainRn6,782 chainRn6,1103 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 est,26 est,652 est,805 gap,19 gap,21 geneid,189 gold,21 gold,23 gold,151 intronEst,28 intronEst,38 intronEst,733 intronEst,889 mrna,24 mrna,392 mrna,522 nestedRepeats,405 netEquCab2,19 netEquCab2,73 netEquCab2,202 netEquCab2,275 netEquCab2,288 netEquCab2,779 netEquCab2,1100 netHg38,19 netHg38,73 netHg38,202 netHg38,275 netHg38,288 netHg38,779 netHg38,1100 netMm10,19 netMm10,73 netMm10,202 netMm10,275 netMm10,288 netMm10,779 netMm10,1100 netRn6,20 netRn6,75 netRn6,204 netRn6,277 netRn6,290 netRn6,782 netRn6,1103 refGene,258 refGene,342 rmsk,428 sgpGene,75 snp148,68 snp148,114 snp148,461 snp148,946 snp148,971 snp148,988 snp148,997 snp148,1016 snp148,1175 snp148,1199 snp148,1808 snp148,1905 snp148,2214 snp148Mult,63 snp148Mult,83 snp148Mult,482 snp148Mult,967 snp148Mult,992 snp148Mult,1009 snp148Mult,1018 snp148Mult,1037 snp148Mult,1196 snp148Mult,1220 snp148Mult,1829 snp148Mult,1926 snp148Mult,2235 transMapEnsemblV5,37 transMapEnsemblV5,164 transMapEnsemblV5,181 transMapEnsemblV5,205 transMapEnsemblV5,334 transMapEnsemblV5,345 transMapEnsemblV5,406 transMapEnsemblV5,416 transMapEnsemblV5,450 transMapEnsemblV5,473 transMapEnsemblV5,606 transMapEnsemblV5,744 transMapEstV5,35 transMapEstV5,133 transMapEstV5,150 transMapEstV5,174 transMapEstV5,303 transMapEstV5,314 transMapEstV5,375 transMapEstV5,385 transMapEstV5,419 transMapEstV5,442 transMapEstV5,575 transMapEstV5,713 transMapRefSeqV5,35 transMapRefSeqV5,133 transMapRefSeqV5,150 transMapRefSeqV5,174 transMapRefSeqV5,303 transMapRefSeqV5,314 transMapRefSeqV5,375 transMapRefSeqV5,385 transMapRefSeqV5,419 transMapRefSeqV5,442 transMapRefSeqV5,575 transMapRefSeqV5,713 transMapRnaV5,35 transMapRnaV5,133 transMapRnaV5,150 transMapRnaV5,174 transMapRnaV5,303 transMapRnaV5,314 transMapRnaV5,375 transMapRnaV5,385 transMapRnaV5,419 transMapRnaV5,442 transMapRnaV5,575 transMapRnaV5,713 transMapV5,34 transMapV5,85 transMapV5,239 transMapV5,256 transMapV5,280 transMapV5,409 transMapV5,420 transMapV5,481 transMapV5,491 transMapV5,525 transMapV5,548 transMapV5,681 transMapV5,819 ucscToINSDC,19 ucscToRefSeq,14 xenoRefGene,224 xenoRefGene,307 genomes chainEquCab2,25 chainEquCab2,582 chainEquCab2,1062 chainHg38,25 chainHg38,582 chainHg38,1062 chainMm10,25 chainMm10,582 chainMm10,1062 chainNetEquCab2,28 chainNetEquCab2,585 chainNetEquCab2,1065 chainNetHg38,28 chainNetHg38,585 chainNetHg38,1065 chainNetMm10,28 chainNetMm10,585 chainNetMm10,1065 chainNetRn6,29 chainNetRn6,588 chainNetRn6,1068 chainRn6,26 chainRn6,585 chainRn6,1065 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netEquCab2,25 netEquCab2,582 netEquCab2,1062 netHg38,25 netHg38,582 netHg38,1062 netMm10,25 netMm10,582 netMm10,1062 netRn6,26 netRn6,585 netRn6,1065 refGene,411 rmsk,392 rmsk,406 sgpGene,87 transMapEnsemblV5,362 transMapEnsemblV5,370 transMapEstV5,331 transMapEstV5,339 transMapRefSeqV5,331 transMapRefSeqV5,339 transMapRnaV5,331 transMapRnaV5,339 transMapV5,437 transMapV5,445 windowmaskerSdust,105 xenoRefGene,376 genomic chainEquCab2,491 chainEquCab2,1014 chainEquCab2,1030 chainHg38,491 chainHg38,1014 chainHg38,1030 chainMm10,491 chainMm10,1014 chainMm10,1030 chainNetEquCab2,494 chainNetEquCab2,1017 chainNetEquCab2,1033 chainNetHg38,494 chainNetHg38,1017 chainNetHg38,1033 chainNetMm10,494 chainNetMm10,1017 chainNetMm10,1033 chainNetRn6,497 chainNetRn6,1020 chainNetRn6,1036 chainRn6,494 chainRn6,1017 chainRn6,1033 est,89 est,407 est,608 est,718 geneid,60 genscan,93 genscan,219 intronEst,73 intronEst,170 intronEst,488 intronEst,689 intronEst,799 mrna,344 mrna,434 netEquCab2,491 netEquCab2,1014 netEquCab2,1030 netHg38,491 netHg38,1014 netHg38,1030 netMm10,491 netMm10,1014 netMm10,1030 netRn6,494 netRn6,1017 netRn6,1033 refGene,197 refGene,308 sgpGene,64 sgpGene,81 snp148,94 snp148,825 snp148,830 snp148,1894 snp148,1938 snp148,1968 snp148,1987 snp148,1992 snp148Mult,13 snp148Mult,846 snp148Mult,851 snp148Mult,1915 snp148Mult,1959 snp148Mult,1989 snp148Mult,2008 snp148Mult,2013 transMapEnsemblV5,128 transMapEstV5,97 transMapRefSeqV5,97 transMapRnaV5,97 transMapV5,203 windowmaskerSdust,3 xenoRefGene,163 xenoRefGene,274 genomics chainEquCab2,11 chainHg38,11 chainMm10,11 chainNetEquCab2,14 chainNetEquCab2Viewchain,12 chainNetEquCab2Viewnet,12 chainNetHg38,14 chainNetHg38Viewchain,12 chainNetHg38Viewnet,12 chainNetMm10,14 chainNetMm10Viewchain,12 chainNetMm10Viewnet,12 chainNetRn6,15 chainNetRn6Viewchain,13 chainNetRn6Viewnet,13 chainRn6,12 netEquCab2,11 netHg38,11 netMm10,11 netRn6,12 transMapEnsemblV5,743 transMapEnsemblV5,798 transMapEstV5,712 transMapEstV5,767 transMapRefSeqV5,712 transMapRefSeqV5,767 transMapRnaV5,712 transMapRnaV5,767 transMapV5,818 transMapV5,873 genotype snp148,1430 snp148Mult,1451 genotypes snp148,1435 snp148Mult,1456 genscan genscan,1 genscan,3 genscan,18 genscan,137 genscan,178 genuine intronEst,112 gertz windowmaskerSdust,92 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 give transMapEnsemblV5,438 transMapEstV5,407 transMapRefSeqV5,407 transMapRnaV5,407 transMapV5,513 given snp148,297 snp148,1100 snp148,1115 snp148Mult,318 snp148Mult,1121 snp148Mult,1136 transMapEnsemblV5,482 transMapEnsemblV5,655 transMapEstV5,451 transMapEstV5,624 transMapRefSeqV5,451 transMapRefSeqV5,624 transMapRnaV5,451 transMapRnaV5,624 transMapV5,557 transMapV5,730 global transMapEnsemblV5,355 transMapEstV5,324 transMapRefSeqV5,324 transMapRnaV5,324 transMapV5,430 go est,415 est,436 genscan,114 intronEst,496 intronEst,517 mrna,352 mrna,375 refGene,214 xenoRefGene,180 gold gold,91 gold,105 gr refGene,356 xenoRefGene,321 graph gc5BaseBw,60 gc5BaseBw,79 graphical chainEquCab2,438 chainHg38,438 chainMm10,438 chainNetEquCab2,441 chainNetHg38,441 chainNetMm10,441 chainNetRn6,444 chainRn6,441 gold,130 netEquCab2,438 netHg38,438 netMm10,438 netRn6,441 rmsk,211 snp148,145 snp148Mult,166 grch38 chainHg38,6 chainHg38,68 chainHg38,302 chainNetHg38,7 chainNetHg38,71 chainNetHg38,305 chainNetHg38Viewchain,5 chainNetHg38Viewnet,5 netHg38,6 netHg38,68 netHg38,302 grcm38 chainMm10,6 chainMm10,68 chainMm10,302 chainNetMm10,7 chainNetMm10,71 chainNetMm10,305 chainNetMm10Viewchain,5 chainNetMm10Viewnet,5 netMm10,6 netMm10,68 netMm10,302 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 group augustusGene,199 augustusGene,236 chainEquCab2,629 chainHg38,629 chainMm10,629 chainNetEquCab2,632 chainNetHg38,632 chainNetMm10,632 chainNetRn6,635 chainRn6,632 geneid,32 netEquCab2,629 netHg38,629 netMm10,629 netRn6,632 sgpGene,41 sgpGene,110 grouped snp148,786 snp148Mult,807 groups augustusGene,195 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 intronEst,89 snp148,342 snp148,1395 snp148,1414 snp148,2005 snp148Mult,363 snp148Mult,1416 snp148Mult,1435 snp148Mult,2026 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5BaseBw,22 guig geneid,24 geneid,160 geneid,183 sgpGene,31 had snp148,926 snp148Mult,947 transMapEnsemblV5,195 transMapEstV5,164 transMapRefSeqV5,164 transMapRnaV5,164 transMapV5,270 handles snp148,1600 snp148,2151 snp148Mult,1621 snp148Mult,2172 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainEquCab2,933 chainEquCab2,1090 chainHg38,933 chainHg38,1090 chainMm10,933 chainMm10,1090 chainNetEquCab2,936 chainNetEquCab2,1093 chainNetHg38,936 chainNetHg38,1093 chainNetMm10,936 chainNetMm10,1093 chainNetRn6,939 chainNetRn6,1096 chainRn6,936 chainRn6,1093 netEquCab2,933 netEquCab2,1090 netHg38,933 netHg38,1090 netMm10,933 netMm10,1090 netRn6,936 netRn6,1093 harris chainEquCab2,1007 chainHg38,1007 chainMm10,1007 chainNetEquCab2,1010 chainNetHg38,1010 chainNetMm10,1010 chainNetRn6,1013 chainRn6,1010 netEquCab2,1007 netHg38,1007 netMm10,1007 netRn6,1010 hart refGene,367 xenoRefGene,332 has est,115 intronEst,196 mrna,61 nestedRepeats,246 refGene,101 snp148,399 snp148,406 snp148,424 snp148,1280 snp148,1331 snp148,1446 snp148,1482 snp148,1962 snp148Mult,420 snp148Mult,427 snp148Mult,445 snp148Mult,1301 snp148Mult,1352 snp148Mult,1467 snp148Mult,1503 snp148Mult,1983 transMapV5,146 xenoRefGene,67 haussler augustusGene,293 chainEquCab2,968 chainEquCab2,1048 chainEquCab2,1092 chainHg38,968 chainHg38,1048 chainHg38,1092 chainMm10,968 chainMm10,1048 chainMm10,1092 chainNetEquCab2,971 chainNetEquCab2,1051 chainNetEquCab2,1095 chainNetHg38,971 chainNetHg38,1051 chainNetHg38,1095 chainNetMm10,971 chainNetMm10,1051 chainNetMm10,1095 chainNetRn6,974 chainNetRn6,1054 chainNetRn6,1098 chainRn6,971 chainRn6,1051 chainRn6,1095 netEquCab2,968 netEquCab2,1048 netEquCab2,1092 netHg38,968 netHg38,1048 netHg38,1092 netMm10,968 netMm10,1048 netMm10,1092 netRn6,971 netRn6,1051 netRn6,1095 transMapEnsemblV5,761 transMapEnsemblV5,795 transMapEstV5,730 transMapEstV5,764 transMapRefSeqV5,730 transMapRefSeqV5,764 transMapRnaV5,730 transMapRnaV5,764 transMapV5,836 transMapV5,870 have chainEquCab2,567 chainHg38,567 chainMm10,567 chainNetEquCab2,570 chainNetHg38,570 chainNetMm10,570 chainNetRn6,573 chainRn6,570 intronEst,6 intronEst,88 nestedRepeats,88 netEquCab2,567 netHg38,567 netMm10,567 netRn6,570 rmsk,69 rmsk,108 snp148,59 snp148,258 snp148,466 snp148,898 snp148,1110 snp148,1225 snp148,1436 snp148,1504 snp148,1509 snp148,1628 snp148,1647 snp148,1918 snp148Mult,54 snp148Mult,127 snp148Mult,279 snp148Mult,487 snp148Mult,919 snp148Mult,1131 snp148Mult,1246 snp148Mult,1457 snp148Mult,1525 snp148Mult,1530 snp148Mult,1649 snp148Mult,1668 snp148Mult,1939 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 est,691 est,700 intronEst,772 intronEst,781 mrna,407 mrna,416 refGene,281 refGene,290 xenoRefGene,247 xenoRefGene,256 header snp148,2176 snp148Mult,2197 headers snp148,2038 snp148Mult,2059 heading snp148,1739 snp148Mult,1760 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 gc5BaseBw,62 refGene,60 helpful est,143 intronEst,224 mrna,89 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 here rmsk,127 snp148,791 snp148Mult,812 transMapEnsemblV5,137 transMapEnsemblV5,151 transMapEnsemblV5,642 transMapEstV5,106 transMapEstV5,120 transMapEstV5,611 transMapRefSeqV5,106 transMapRefSeqV5,120 transMapRefSeqV5,611 transMapRnaV5,106 transMapRnaV5,120 transMapRnaV5,611 transMapV5,212 transMapV5,226 transMapV5,717 heterozygosity snp148,1514 snp148,1524 snp148,1533 snp148,2127 snp148Mult,1535 snp148Mult,1545 snp148Mult,1554 snp148Mult,2148 heterozygous snp148,267 snp148,268 snp148,274 snp148Mult,288 snp148Mult,289 snp148Mult,295 hg38 chainHg38,7 chainHg38,69 chainHg38,303 chainNetHg38,8 chainNetHg38,72 chainNetHg38,306 chainNetHg38Viewchain,6 chainNetHg38Viewnet,6 netHg38,7 netHg38,69 netHg38,303 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 transMapEnsemblV5,661 transMapEstV5,630 transMapRefSeqV5,630 transMapRnaV5,630 transMapV5,736 hiatt refGene,357 xenoRefGene,322 hidden augustusGene,325 hide refGene,225 xenoRefGene,191 hierarchical geneid,65 hierarchy chainEquCab2,816 chainHg38,816 chainMm10,816 chainNetEquCab2,819 chainNetHg38,819 chainNetMm10,819 chainNetRn6,822 chainRn6,819 netEquCab2,816 netHg38,816 netMm10,816 netRn6,819 high gc5BaseBw,30 transMapV5,119 higher chainEquCab2,848 chainHg38,848 chainMm10,848 chainNetEquCab2,851 chainNetHg38,851 chainNetMm10,851 chainNetRn6,854 chainRn6,851 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netEquCab2,848 netHg38,848 netMm10,848 netRn6,851 rmsk,230 transMapV5,147 higher-level chainEquCab2,865 chainHg38,865 chainMm10,865 chainNetEquCab2,868 chainNetHg38,868 chainNetMm10,868 chainNetRn6,871 chainRn6,868 netEquCab2,865 netHg38,865 netMm10,865 netRn6,868 higher-scoring chainEquCab2,809 chainEquCab2,828 chainHg38,809 chainHg38,828 chainMm10,809 chainMm10,828 chainNetEquCab2,812 chainNetEquCab2,831 chainNetHg38,812 chainNetHg38,831 chainNetMm10,812 chainNetMm10,831 chainNetRn6,815 chainNetRn6,834 chainRn6,812 chainRn6,831 netEquCab2,809 netEquCab2,828 netHg38,809 netHg38,828 netMm10,809 netMm10,828 netRn6,812 netRn6,831 highest est,693 intronEst,774 mrna,409 refGene,283 snp148,1561 snp148Mult,1582 xenoRefGene,249 highest-scoring chainEquCab2,390 chainEquCab2,775 chainHg38,390 chainHg38,775 chainMm10,390 chainMm10,775 chainNetEquCab2,393 chainNetEquCab2,778 chainNetHg38,393 chainNetHg38,778 chainNetMm10,393 chainNetMm10,778 chainNetRn6,396 chainNetRn6,781 chainRn6,393 chainRn6,778 netEquCab2,390 netEquCab2,775 netHg38,390 netHg38,775 netMm10,390 netMm10,775 netRn6,393 netRn6,778 highlight est,334 gc5BaseBw,50 intronEst,415 mrna,280 highlighted est,304 est,322 intronEst,385 intronEst,403 mrna,250 mrna,268 highly microsat,40 snp148,136 snp148Mult,105 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainEquCab2,1044 chainHg38,1044 chainMm10,1044 chainNetEquCab2,1047 chainNetHg38,1047 chainNetMm10,1047 chainNetRn6,1050 chainRn6,1047 netEquCab2,1044 netHg38,1044 netMm10,1044 netRn6,1047 hiram gc5BaseBw,83 ucscToINSDC,52 ucscToRefSeq,46 his chainEquCab2,942 chainHg38,942 chainMm10,942 chainNetEquCab2,945 chainNetHg38,945 chainNetMm10,945 chainNetRn6,948 chainRn6,945 netEquCab2,942 netHg38,942 netMm10,942 netRn6,945 hits snp148,1768 snp148Mult,1789 homology sgpGene,9 homology-based sgpGene,24 honeybee1 augustusGene,218 horizontal nestedRepeats,130 nestedRepeats,150 horse chainEquCab2,1 chainEquCab2,3 chainEquCab2,65 chainEquCab2,96 chainEquCab2,148 chainEquCab2,266 chainEquCab2,291 chainEquCab2,572 chainEquCab2,620 chainNetEquCab2,1 chainNetEquCab2,4 chainNetEquCab2,68 chainNetEquCab2,99 chainNetEquCab2,151 chainNetEquCab2,269 chainNetEquCab2,294 chainNetEquCab2,575 chainNetEquCab2,623 chainNetEquCab2Viewchain,2 chainNetEquCab2Viewnet,2 netEquCab2,1 netEquCab2,3 netEquCab2,65 netEquCab2,96 netEquCab2,148 netEquCab2,266 netEquCab2,291 netEquCab2,572 netEquCab2,620 hou chainEquCab2,921 chainHg38,921 chainMm10,921 chainNetEquCab2,924 chainNetHg38,924 chainNetMm10,924 chainNetRn6,927 chainRn6,924 netEquCab2,921 netHg38,921 netMm10,921 netRn6,924 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainEquCab2,876 chainEquCab2,893 chainHg38,876 chainHg38,893 chainMm10,876 chainMm10,893 chainNetEquCab2,879 chainNetEquCab2,896 chainNetHg38,879 chainNetHg38,896 chainNetMm10,879 chainNetMm10,896 chainNetRn6,882 chainNetRn6,899 chainRn6,879 chainRn6,896 netEquCab2,876 netEquCab2,893 netHg38,876 netHg38,893 netMm10,876 netMm10,893 netRn6,879 netRn6,896 rmsk,121 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 transMapEnsemblV5,486 transMapEstV5,455 transMapRefSeqV5,455 transMapRnaV5,455 transMapV5,561 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 rmsk,355 transMapEnsemblV5,660 transMapEstV5,629 transMapRefSeqV5,629 transMapRnaV5,629 transMapV5,735 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 human augustusGene,206 augustusGene,211 augustusGene,277 chainEquCab2,1061 chainHg38,1 chainHg38,3 chainHg38,65 chainHg38,96 chainHg38,148 chainHg38,266 chainHg38,291 chainHg38,572 chainHg38,620 chainHg38,1061 chainMm10,1061 chainNetEquCab2,1064 chainNetHg38,1 chainNetHg38,4 chainNetHg38,68 chainNetHg38,99 chainNetHg38,151 chainNetHg38,269 chainNetHg38,294 chainNetHg38,575 chainNetHg38,623 chainNetHg38,1064 chainNetHg38Viewchain,2 chainNetHg38Viewnet,2 chainNetMm10,1064 chainNetRn6,1067 chainRn6,1064 genscan,218 nestedRepeats,404 netEquCab2,1061 netHg38,1 netHg38,3 netHg38,65 netHg38,96 netHg38,148 netHg38,266 netHg38,291 netHg38,572 netHg38,620 netHg38,1061 netMm10,1061 netRn6,1064 rmsk,427 sgpGene,8 snp148,1250 snp148,1300 snp148,2141 snp148Mult,1271 snp148Mult,1321 snp148Mult,2162 transMapEnsemblV5,43 transMapEnsemblV5,363 transMapEnsemblV5,472 transMapEnsemblV5,739 transMapEnsemblV5,807 transMapEstV5,332 transMapEstV5,441 transMapEstV5,708 transMapEstV5,776 transMapRefSeqV5,332 transMapRefSeqV5,441 transMapRefSeqV5,708 transMapRefSeqV5,776 transMapRnaV5,332 transMapRnaV5,441 transMapRnaV5,708 transMapRnaV5,776 transMapV5,105 transMapV5,134 transMapV5,438 transMapV5,547 transMapV5,814 transMapV5,882 human-mouse chainEquCab2,1096 chainHg38,1096 chainMm10,1096 chainNetEquCab2,1099 chainNetHg38,1099 chainNetMm10,1099 chainNetRn6,1102 chainRn6,1099 netEquCab2,1096 netHg38,1096 netMm10,1096 netRn6,1099 hybridizes est,498 intronEst,579 i est,751 est,775 intronEst,835 intronEst,859 mrna,468 mrna,492 i.e intronEst,71 snp148,1130 snp148,1668 snp148Mult,1151 snp148Mult,1689 id nestedRepeats,10 nestedRepeats,106 identical snp148,140 snp148Mult,109 identified chainEquCab2,937 chainHg38,937 chainMm10,937 chainNetEquCab2,940 chainNetHg38,940 chainNetMm10,940 chainNetRn6,943 chainRn6,940 est,697 intronEst,778 netEquCab2,937 netHg38,937 netMm10,937 netRn6,940 refGene,287 transMapEnsemblV5,513 transMapEstV5,482 transMapRefSeqV5,482 transMapRnaV5,482 transMapV5,588 xenoRefGene,253 identifier transMapEnsemblV5,484 transMapEstV5,453 transMapRefSeqV5,453 transMapRnaV5,453 transMapV5,559 identifiers snp148,1605 snp148Mult,1626 transMapEnsemblV5,385 transMapEnsemblV5,444 transMapEnsemblV5,462 transMapEstV5,354 transMapEstV5,413 transMapEstV5,431 transMapRefSeqV5,354 transMapRefSeqV5,413 transMapRefSeqV5,431 transMapRnaV5,354 transMapRnaV5,413 transMapRnaV5,431 transMapV5,460 transMapV5,519 transMapV5,537 ucscToRefSeq,20 identify geneid,166 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 identity est,695 est,703 est,715 intronEst,776 intronEst,784 intronEst,796 microsat,71 mrna,411 mrna,419 mrna,431 nestedRepeats,187 nestedRepeats,222 refGene,285 refGene,293 refGene,305 xenoRefGene,251 xenoRefGene,259 xenoRefGene,271 ideogram cytoBandIdeo,3 cytoBandIdeo,4 if est,277 est,289 est,305 est,341 est,358 gap,77 intronEst,358 intronEst,370 intronEst,386 intronEst,422 intronEst,439 mrna,223 mrna,235 mrna,251 mrna,287 mrna,304 nestedRepeats,137 refGene,238 snp148,472 snp148,872 snp148,1853 snp148,1870 snp148Mult,493 snp148Mult,893 snp148Mult,1874 snp148Mult,1891 transMapEnsemblV5,245 transMapEstV5,214 transMapRefSeqV5,214 transMapRnaV5,214 transMapV5,320 xenoRefGene,204 ii215-25 augustusGene,339 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 imply snp148,1209 snp148,1270 snp148Mult,1230 snp148Mult,1291 improve augustusGene,303 transMapEnsemblV5,771 transMapEstV5,740 transMapRefSeqV5,740 transMapRnaV5,740 transMapV5,846 improved chainEquCab2,1010 chainHg38,1010 chainMm10,1010 chainNetEquCab2,1013 chainNetHg38,1013 chainNetMm10,1013 chainNetRn6,1016 chainRn6,1013 netEquCab2,1010 netHg38,1010 netMm10,1010 netRn6,1013 in augustusGene,102 chainEquCab2,31 chainEquCab2,94 chainEquCab2,114 chainEquCab2,146 chainEquCab2,153 chainEquCab2,167 chainEquCab2,186 chainEquCab2,189 chainEquCab2,228 chainEquCab2,249 chainEquCab2,294 chainEquCab2,327 chainEquCab2,357 chainEquCab2,369 chainEquCab2,378 chainEquCab2,396 chainEquCab2,401 chainEquCab2,410 chainEquCab2,422 chainEquCab2,436 chainEquCab2,478 chainEquCab2,495 chainEquCab2,526 chainEquCab2,544 chainEquCab2,558 chainEquCab2,593 chainEquCab2,689 chainEquCab2,777 chainEquCab2,818 chainEquCab2,826 chainEquCab2,842 chainEquCab2,875 chainEquCab2,887 chainEquCab2,1057 chainHg38,31 chainHg38,94 chainHg38,114 chainHg38,146 chainHg38,153 chainHg38,167 chainHg38,186 chainHg38,189 chainHg38,228 chainHg38,249 chainHg38,294 chainHg38,327 chainHg38,357 chainHg38,369 chainHg38,378 chainHg38,396 chainHg38,401 chainHg38,410 chainHg38,422 chainHg38,436 chainHg38,478 chainHg38,495 chainHg38,526 chainHg38,544 chainHg38,558 chainHg38,593 chainHg38,689 chainHg38,777 chainHg38,818 chainHg38,826 chainHg38,842 chainHg38,875 chainHg38,887 chainHg38,1057 chainMm10,31 chainMm10,94 chainMm10,114 chainMm10,146 chainMm10,153 chainMm10,167 chainMm10,186 chainMm10,189 chainMm10,228 chainMm10,249 chainMm10,294 chainMm10,327 chainMm10,357 chainMm10,369 chainMm10,378 chainMm10,396 chainMm10,401 chainMm10,410 chainMm10,422 chainMm10,436 chainMm10,478 chainMm10,495 chainMm10,526 chainMm10,544 chainMm10,558 chainMm10,593 chainMm10,689 chainMm10,777 chainMm10,818 chainMm10,826 chainMm10,842 chainMm10,875 chainMm10,887 chainMm10,1057 chainNetEquCab2,34 chainNetEquCab2,97 chainNetEquCab2,117 chainNetEquCab2,149 chainNetEquCab2,156 chainNetEquCab2,170 chainNetEquCab2,189 chainNetEquCab2,192 chainNetEquCab2,231 chainNetEquCab2,252 chainNetEquCab2,297 chainNetEquCab2,330 chainNetEquCab2,360 chainNetEquCab2,372 chainNetEquCab2,381 chainNetEquCab2,399 chainNetEquCab2,404 chainNetEquCab2,413 chainNetEquCab2,425 chainNetEquCab2,439 chainNetEquCab2,481 chainNetEquCab2,498 chainNetEquCab2,529 chainNetEquCab2,547 chainNetEquCab2,561 chainNetEquCab2,596 chainNetEquCab2,692 chainNetEquCab2,780 chainNetEquCab2,821 chainNetEquCab2,829 chainNetEquCab2,845 chainNetEquCab2,878 chainNetEquCab2,890 chainNetEquCab2,1060 chainNetHg38,34 chainNetHg38,97 chainNetHg38,117 chainNetHg38,149 chainNetHg38,156 chainNetHg38,170 chainNetHg38,189 chainNetHg38,192 chainNetHg38,231 chainNetHg38,252 chainNetHg38,297 chainNetHg38,330 chainNetHg38,360 chainNetHg38,372 chainNetHg38,381 chainNetHg38,399 chainNetHg38,404 chainNetHg38,413 chainNetHg38,425 chainNetHg38,439 chainNetHg38,481 chainNetHg38,498 chainNetHg38,529 chainNetHg38,547 chainNetHg38,561 chainNetHg38,596 chainNetHg38,692 chainNetHg38,780 chainNetHg38,821 chainNetHg38,829 chainNetHg38,845 chainNetHg38,878 chainNetHg38,890 chainNetHg38,1060 chainNetMm10,34 chainNetMm10,97 chainNetMm10,117 chainNetMm10,149 chainNetMm10,156 chainNetMm10,170 chainNetMm10,189 chainNetMm10,192 chainNetMm10,231 chainNetMm10,252 chainNetMm10,297 chainNetMm10,330 chainNetMm10,360 chainNetMm10,372 chainNetMm10,381 chainNetMm10,399 chainNetMm10,404 chainNetMm10,413 chainNetMm10,425 chainNetMm10,439 chainNetMm10,481 chainNetMm10,498 chainNetMm10,529 chainNetMm10,547 chainNetMm10,561 chainNetMm10,596 chainNetMm10,692 chainNetMm10,780 chainNetMm10,821 chainNetMm10,829 chainNetMm10,845 chainNetMm10,878 chainNetMm10,890 chainNetMm10,1060 chainNetRn6,35 chainNetRn6,99 chainNetRn6,119 chainNetRn6,151 chainNetRn6,158 chainNetRn6,172 chainNetRn6,191 chainNetRn6,194 chainNetRn6,233 chainNetRn6,254 chainNetRn6,299 chainNetRn6,333 chainNetRn6,363 chainNetRn6,375 chainNetRn6,384 chainNetRn6,402 chainNetRn6,407 chainNetRn6,416 chainNetRn6,428 chainNetRn6,442 chainNetRn6,484 chainNetRn6,501 chainNetRn6,532 chainNetRn6,550 chainNetRn6,564 chainNetRn6,599 chainNetRn6,695 chainNetRn6,783 chainNetRn6,824 chainNetRn6,832 chainNetRn6,848 chainNetRn6,881 chainNetRn6,893 chainNetRn6,1063 chainRn6,32 chainRn6,96 chainRn6,116 chainRn6,148 chainRn6,155 chainRn6,169 chainRn6,188 chainRn6,191 chainRn6,230 chainRn6,251 chainRn6,296 chainRn6,330 chainRn6,360 chainRn6,372 chainRn6,381 chainRn6,399 chainRn6,404 chainRn6,413 chainRn6,425 chainRn6,439 chainRn6,481 chainRn6,498 chainRn6,529 chainRn6,547 chainRn6,561 chainRn6,596 chainRn6,692 chainRn6,780 chainRn6,821 chainRn6,829 chainRn6,845 chainRn6,878 chainRn6,890 chainRn6,1060 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 est,22 est,35 est,58 est,149 est,170 est,193 est,203 est,221 est,274 est,396 est,529 est,577 est,686 gap,14 gap,26 gap,44 gap,74 gap,129 gap,143 gc5BaseBw,5 gc5BaseBw,27 gc5BaseBw,44 geneid,46 geneid,58 geneid,67 geneid,187 genscan,102 genscan,151 genscan,163 genscan,166 genscan,185 genscan,189 genscan,199 genscan,217 gold,16 gold,28 gold,67 gold,128 gold,139 gold,147 intronEst,24 intronEst,47 intronEst,85 intronEst,99 intronEst,142 intronEst,230 intronEst,251 intronEst,274 intronEst,284 intronEst,302 intronEst,355 intronEst,477 intronEst,610 intronEst,658 intronEst,767 intronEst,803 microsat,42 microsat,49 mrna,20 mrna,39 mrna,95 mrna,116 mrna,139 mrna,149 mrna,167 mrna,220 mrna,402 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netEquCab2,31 netEquCab2,94 netEquCab2,114 netEquCab2,146 netEquCab2,153 netEquCab2,167 netEquCab2,186 netEquCab2,189 netEquCab2,228 netEquCab2,249 netEquCab2,294 netEquCab2,327 netEquCab2,357 netEquCab2,369 netEquCab2,378 netEquCab2,396 netEquCab2,401 netEquCab2,410 netEquCab2,422 netEquCab2,436 netEquCab2,478 netEquCab2,495 netEquCab2,526 netEquCab2,544 netEquCab2,558 netEquCab2,593 netEquCab2,689 netEquCab2,777 netEquCab2,818 netEquCab2,826 netEquCab2,842 netEquCab2,875 netEquCab2,887 netEquCab2,1057 netHg38,31 netHg38,94 netHg38,114 netHg38,146 netHg38,153 netHg38,167 netHg38,186 netHg38,189 netHg38,228 netHg38,249 netHg38,294 netHg38,327 netHg38,357 netHg38,369 netHg38,378 netHg38,396 netHg38,401 netHg38,410 netHg38,422 netHg38,436 netHg38,478 netHg38,495 netHg38,526 netHg38,544 netHg38,558 netHg38,593 netHg38,689 netHg38,777 netHg38,818 netHg38,826 netHg38,842 netHg38,875 netHg38,887 netHg38,1057 netMm10,31 netMm10,94 netMm10,114 netMm10,146 netMm10,153 netMm10,167 netMm10,186 netMm10,189 netMm10,228 netMm10,249 netMm10,294 netMm10,327 netMm10,357 netMm10,369 netMm10,378 netMm10,396 netMm10,401 netMm10,410 netMm10,422 netMm10,436 netMm10,478 netMm10,495 netMm10,526 netMm10,544 netMm10,558 netMm10,593 netMm10,689 netMm10,777 netMm10,818 netMm10,826 netMm10,842 netMm10,875 netMm10,887 netMm10,1057 netRn6,32 netRn6,96 netRn6,116 netRn6,148 netRn6,155 netRn6,169 netRn6,188 netRn6,191 netRn6,230 netRn6,251 netRn6,296 netRn6,330 netRn6,360 netRn6,372 netRn6,381 netRn6,399 netRn6,404 netRn6,413 netRn6,425 netRn6,439 netRn6,481 netRn6,498 netRn6,529 netRn6,547 netRn6,561 netRn6,596 netRn6,692 netRn6,780 netRn6,821 netRn6,829 netRn6,845 netRn6,878 netRn6,890 netRn6,1060 refGene,276 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 sgpGene,55 sgpGene,62 snp148,46 snp148,51 snp148,65 snp148,85 snp148,111 snp148,180 snp148,284 snp148,316 snp148,397 snp148,447 snp148,459 snp148,494 snp148,588 snp148,625 snp148,655 snp148,773 snp148,863 snp148,962 snp148,1133 snp148,1254 snp148,1283 snp148,1287 snp148,1293 snp148,1297 snp148,1306 snp148,1346 snp148,1397 snp148,1407 snp148,1416 snp148,1426 snp148,1493 snp148,1520 snp148,1778 snp148,1805 snp148,1828 snp148,1909 snp148,1972 snp148,2009 snp148,2113 snp148,2178 snp148Mult,60 snp148Mult,67 snp148Mult,80 snp148Mult,140 snp148Mult,150 snp148Mult,201 snp148Mult,305 snp148Mult,337 snp148Mult,418 snp148Mult,468 snp148Mult,480 snp148Mult,515 snp148Mult,609 snp148Mult,646 snp148Mult,676 snp148Mult,794 snp148Mult,884 snp148Mult,983 snp148Mult,1154 snp148Mult,1275 snp148Mult,1304 snp148Mult,1308 snp148Mult,1314 snp148Mult,1318 snp148Mult,1327 snp148Mult,1367 snp148Mult,1418 snp148Mult,1428 snp148Mult,1437 snp148Mult,1447 snp148Mult,1514 snp148Mult,1541 snp148Mult,1799 snp148Mult,1826 snp148Mult,1849 snp148Mult,1930 snp148Mult,1993 snp148Mult,2030 snp148Mult,2134 snp148Mult,2199 transMapEnsemblV5,34 transMapEnsemblV5,83 transMapEnsemblV5,90 transMapEnsemblV5,161 transMapEnsemblV5,336 transMapEnsemblV5,360 transMapEnsemblV5,368 transMapEnsemblV5,403 transMapEnsemblV5,413 transMapEnsemblV5,447 transMapEnsemblV5,493 transMapEnsemblV5,543 transMapEnsemblV5,585 transMapEstV5,32 transMapEstV5,52 transMapEstV5,59 transMapEstV5,130 transMapEstV5,305 transMapEstV5,329 transMapEstV5,337 transMapEstV5,372 transMapEstV5,382 transMapEstV5,416 transMapEstV5,462 transMapEstV5,512 transMapEstV5,554 transMapRefSeqV5,32 transMapRefSeqV5,52 transMapRefSeqV5,59 transMapRefSeqV5,130 transMapRefSeqV5,305 transMapRefSeqV5,329 transMapRefSeqV5,337 transMapRefSeqV5,372 transMapRefSeqV5,382 transMapRefSeqV5,416 transMapRefSeqV5,462 transMapRefSeqV5,512 transMapRefSeqV5,554 transMapRnaV5,32 transMapRnaV5,52 transMapRnaV5,59 transMapRnaV5,130 transMapRnaV5,305 transMapRnaV5,329 transMapRnaV5,337 transMapRnaV5,372 transMapRnaV5,382 transMapRnaV5,416 transMapRnaV5,462 transMapRnaV5,512 transMapRnaV5,554 transMapV5,31 transMapV5,53 transMapV5,60 transMapV5,77 transMapV5,236 transMapV5,411 transMapV5,435 transMapV5,443 transMapV5,478 transMapV5,488 transMapV5,522 transMapV5,568 transMapV5,618 transMapV5,660 windowmaskerSdust,27 xenoRefGene,242 in-del snp148,264 snp148,1090 snp148,1837 snp148,1866 snp148,1883 snp148Mult,285 snp148Mult,1111 snp148Mult,1858 snp148Mult,1887 snp148Mult,1904 include est,131 est,336 est,360 intronEst,212 intronEst,417 intronEst,441 mrna,77 mrna,282 mrna,306 rmsk,159 rmsk,172 snp148,1659 snp148Mult,1680 included augustusGene,161 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 snp148,1804 snp148Mult,66 snp148Mult,1825 windowmaskerSdust,26 includes rmsk,198 including est,5 intronEst,121 rmsk,188 incomplete snp148,891 snp148Mult,912 incorrect snp148,1050 snp148Mult,1071 indels microsat,74 snp148,26 snp148Mult,36 indicate chainEquCab2,137 chainEquCab2,243 chainHg38,137 chainHg38,243 chainMm10,137 chainMm10,243 chainNetEquCab2,140 chainNetEquCab2,246 chainNetHg38,140 chainNetHg38,246 chainNetMm10,140 chainNetMm10,246 chainNetRn6,142 chainNetRn6,248 chainRn6,139 chainRn6,245 est,69 mrna,50 nestedRepeats,153 netEquCab2,137 netEquCab2,243 netHg38,137 netHg38,243 netMm10,137 netMm10,243 netRn6,139 netRn6,245 snp148,854 snp148Mult,875 indicated snp148,186 snp148,2016 snp148Mult,207 snp148Mult,2037 indicates est,77 intronEst,148 intronEst,158 refGene,93 snp148,1983 snp148Mult,2004 xenoRefGene,59 individual chainEquCab2,240 chainEquCab2,493 chainHg38,240 chainHg38,493 chainMm10,240 chainMm10,493 chainNetEquCab2,243 chainNetEquCab2,496 chainNetHg38,243 chainNetHg38,496 chainNetMm10,243 chainNetMm10,496 chainNetRn6,245 chainNetRn6,499 chainRn6,242 chainRn6,496 netEquCab2,240 netEquCab2,493 netHg38,240 netHg38,493 netMm10,240 netMm10,493 netRn6,242 netRn6,496 snp148,1442 snp148Mult,1463 transMapEnsemblV5,601 transMapEstV5,570 transMapRefSeqV5,570 transMapRnaV5,570 transMapV5,676 individuals snp148,1681 snp148Mult,1702 information augustusGene,37 chainEquCab2,456 chainEquCab2,469 chainEquCab2,475 chainEquCab2,843 chainHg38,456 chainHg38,469 chainHg38,475 chainHg38,843 chainMm10,456 chainMm10,469 chainMm10,475 chainMm10,843 chainNetEquCab2,459 chainNetEquCab2,472 chainNetEquCab2,478 chainNetEquCab2,846 chainNetHg38,459 chainNetHg38,472 chainNetHg38,478 chainNetHg38,846 chainNetMm10,459 chainNetMm10,472 chainNetMm10,478 chainNetMm10,846 chainNetRn6,462 chainNetRn6,475 chainNetRn6,481 chainNetRn6,849 chainRn6,459 chainRn6,472 chainRn6,478 chainRn6,846 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 est,76 est,411 est,435 gap,35 gc5BaseBw,56 genscan,52 genscan,127 gold,37 intronEst,157 intronEst,492 intronEst,516 microsat,97 mrna,348 mrna,374 nestedRepeats,53 nestedRepeats,301 netEquCab2,456 netEquCab2,469 netEquCab2,475 netEquCab2,843 netHg38,456 netHg38,469 netHg38,475 netHg38,843 netMm10,456 netMm10,469 netMm10,475 netMm10,843 netRn6,459 netRn6,472 netRn6,478 netRn6,846 refGene,66 refGene,210 rmsk,89 rmsk,324 simpleRepeat,58 snp148,16 snp148,1330 snp148,2249 snp148Mult,22 snp148Mult,1351 snp148Mult,2270 transMapEnsemblV5,132 transMapEnsemblV5,149 transMapEnsemblV5,567 transMapEstV5,101 transMapEstV5,118 transMapEstV5,536 transMapRefSeqV5,101 transMapRefSeqV5,118 transMapRefSeqV5,536 transMapRnaV5,101 transMapRnaV5,118 transMapRnaV5,536 transMapV5,207 transMapV5,224 transMapV5,642 xenoRefGene,176 informative snp148,949 snp148,991 snp148,1019 snp148,1178 snp148,1202 snp148,1959 snp148Mult,970 snp148Mult,1012 snp148Mult,1040 snp148Mult,1199 snp148Mult,1223 snp148Mult,1980 inframe_indel snp148,692 snp148,807 snp148Mult,713 snp148Mult,828 inheritance snp148,1296 snp148,1305 snp148Mult,1317 snp148Mult,1326 initiate rmsk,316 initio augustusGene,4 augustusGene,18 input windowmaskerSdust,61 windowmaskerSdust,70 insdc ucscToINSDC,1 ucscToINSDC,4 ucscToINSDC,33 inserted chainEquCab2,569 chainEquCab2,899 chainHg38,569 chainHg38,899 chainMm10,569 chainMm10,899 chainNetEquCab2,572 chainNetEquCab2,902 chainNetHg38,572 chainNetHg38,902 chainNetMm10,572 chainNetMm10,902 chainNetRn6,575 chainNetRn6,905 chainRn6,572 chainRn6,902 netEquCab2,569 netEquCab2,899 netHg38,569 netHg38,899 netMm10,569 netMm10,899 netRn6,572 netRn6,902 snp148,680 snp148,908 snp148,913 snp148Mult,701 snp148Mult,929 snp148Mult,934 insertion chainEquCab2,152 chainHg38,152 chainMm10,152 chainNetEquCab2,155 chainNetHg38,155 chainNetMm10,155 chainNetRn6,157 chainRn6,154 est,440 intronEst,521 mrna,379 netEquCab2,152 netHg38,152 netMm10,152 netRn6,154 rmsk,223 snp148,265 snp148,344 snp148,349 snp148,896 snp148,994 snp148,1091 snp148,1868 snp148Mult,286 snp148Mult,365 snp148Mult,370 snp148Mult,917 snp148Mult,1015 snp148Mult,1112 snp148Mult,1889 insertions nestedRepeats,86 nestedRepeats,92 snp148,23 snp148,184 snp148,1830 snp148Mult,33 snp148Mult,205 snp148Mult,1851 instead refGene,153 snp148,302 snp148,1929 snp148Mult,323 snp148Mult,1950 xenoRefGene,119 institute nestedRepeats,55 rmsk,91 instructions transMapEnsemblV5,632 transMapEstV5,601 transMapRefSeqV5,601 transMapRnaV5,601 transMapV5,707 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 snp148,2205 snp148,2209 snp148Mult,2226 snp148Mult,2230 transMapEnsemblV5,535 transMapEstV5,504 transMapRefSeqV5,504 transMapRnaV5,504 transMapV5,610 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 snp148,2199 snp148Mult,2220 transMapEnsemblV5,527 transMapEstV5,496 transMapRefSeqV5,496 transMapRnaV5,496 transMapV5,602 intergenic genscan,48 snp148,506 snp148Mult,527 internal snp148,2102 snp148Mult,2123 international est,736 intronEst,820 mrna,453 transMapEnsemblV5,693 transMapEstV5,662 transMapRefSeqV5,662 transMapRnaV5,662 transMapV5,768 ucscToINSDC,5 ucscToINSDC,28 internet nestedRepeats,279 interpreting snp148,141 snp148Mult,162 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 intervals windowmaskerSdust,4 into chainEquCab2,599 chainEquCab2,611 chainEquCab2,627 chainEquCab2,802 chainHg38,599 chainHg38,611 chainHg38,627 chainHg38,802 chainMm10,599 chainMm10,611 chainMm10,627 chainMm10,802 chainNetEquCab2,602 chainNetEquCab2,614 chainNetEquCab2,630 chainNetEquCab2,805 chainNetHg38,602 chainNetHg38,614 chainNetHg38,630 chainNetHg38,805 chainNetMm10,602 chainNetMm10,614 chainNetMm10,630 chainNetMm10,805 chainNetRn6,605 chainNetRn6,617 chainNetRn6,633 chainNetRn6,808 chainRn6,602 chainRn6,614 chainRn6,630 chainRn6,805 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 est,253 est,458 est,465 est,610 intronEst,334 intronEst,539 intronEst,546 intronEst,691 mrna,199 netEquCab2,599 netEquCab2,611 netEquCab2,627 netEquCab2,802 netHg38,599 netHg38,611 netHg38,627 netHg38,802 netMm10,599 netMm10,611 netMm10,627 netMm10,802 netRn6,602 netRn6,614 netRn6,630 netRn6,805 snp148,117 snp148,787 snp148,995 snp148,1616 snp148,1699 snp148,2120 snp148Mult,86 snp148Mult,808 snp148Mult,1016 snp148Mult,1637 snp148Mult,1720 snp148Mult,2141 windowmaskerSdust,80 intron augustusGene,89 augustusGene,331 est,659 intronEst,70 intronEst,740 snp148,532 snp148,535 snp148,749 snp148,769 snp148,811 snp148Mult,553 snp148Mult,556 snp148Mult,770 snp148Mult,790 snp148Mult,832 intron_variant snp148,525 snp148,812 snp148Mult,546 snp148Mult,833 introns chainEquCab2,56 chainHg38,56 chainMm10,56 chainNetEquCab2,59 chainNetHg38,59 chainNetMm10,59 chainNetRn6,60 chainRn6,57 est,676 genscan,46 intronEst,757 netEquCab2,56 netHg38,56 netMm10,56 netRn6,57 inv chainEquCab2,531 chainHg38,531 chainMm10,531 chainNetEquCab2,534 chainNetHg38,534 chainNetMm10,534 chainNetRn6,537 chainRn6,534 netEquCab2,531 netHg38,531 netMm10,531 netRn6,534 invariant snp148,314 snp148Mult,335 inversions chainEquCab2,110 chainEquCab2,174 chainHg38,110 chainHg38,174 chainMm10,110 chainMm10,174 chainNetEquCab2,113 chainNetEquCab2,177 chainNetHg38,113 chainNetHg38,177 chainNetMm10,113 chainNetMm10,177 chainNetRn6,115 chainNetRn6,179 chainRn6,112 chainRn6,176 netEquCab2,110 netEquCab2,174 netHg38,110 netHg38,174 netMm10,110 netMm10,174 netRn6,112 netRn6,176 inverted chainEquCab2,861 chainHg38,861 chainMm10,861 chainNetEquCab2,864 chainNetHg38,864 chainNetMm10,864 chainNetRn6,867 chainRn6,864 netEquCab2,861 netHg38,861 netMm10,861 netRn6,864 involve chainEquCab2,164 chainHg38,164 chainMm10,164 chainNetEquCab2,167 chainNetHg38,167 chainNetMm10,167 chainNetRn6,169 chainRn6,166 netEquCab2,164 netHg38,164 netMm10,164 netRn6,166 is chainEquCab2,277 chainEquCab2,297 chainEquCab2,476 chainHg38,277 chainHg38,297 chainHg38,476 chainMm10,277 chainMm10,297 chainMm10,476 chainNetEquCab2,280 chainNetEquCab2,300 chainNetEquCab2,479 chainNetHg38,280 chainNetHg38,300 chainNetHg38,479 chainNetMm10,280 chainNetMm10,300 chainNetMm10,479 chainNetRn6,282 chainNetRn6,302 chainNetRn6,482 chainRn6,279 chainRn6,299 chainRn6,479 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 est,293 est,309 est,345 est,362 est,451 est,463 est,472 est,492 est,621 est,664 gap,47 gap,92 gap,99 gap,107 gc5BaseBw,33 geneid,34 geneid,52 geneid,131 gold,46 gold,120 gold,126 intronEst,103 intronEst,374 intronEst,390 intronEst,426 intronEst,443 intronEst,532 intronEst,544 intronEst,553 intronEst,573 intronEst,702 intronEst,745 microsat,88 mrna,239 mrna,255 mrna,291 mrna,308 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netEquCab2,277 netEquCab2,297 netEquCab2,476 netHg38,277 netHg38,297 netHg38,476 netMm10,277 netMm10,297 netMm10,476 netRn6,279 netRn6,299 netRn6,479 rmsk,95 rmsk,360 sgpGene,43 simpleRepeat,28 snp148,77 snp148,83 snp148,121 snp148,281 snp148,296 snp148,347 snp148,358 snp148,513 snp148,585 snp148,622 snp148,652 snp148,683 snp148,1048 snp148,1081 snp148,1088 snp148,1212 snp148,1217 snp148,1253 snp148,1262 snp148,1291 snp148,1351 snp148,1371 snp148,1403 snp148,1422 snp148,1490 snp148,1581 snp148,1675 snp148,1770 snp148,1796 snp148,1820 snp148,1826 snp148,1857 snp148,1874 snp148,1970 snp148,2007 snp148Mult,90 snp148Mult,117 snp148Mult,302 snp148Mult,317 snp148Mult,368 snp148Mult,379 snp148Mult,534 snp148Mult,606 snp148Mult,643 snp148Mult,673 snp148Mult,704 snp148Mult,1069 snp148Mult,1102 snp148Mult,1109 snp148Mult,1233 snp148Mult,1238 snp148Mult,1274 snp148Mult,1283 snp148Mult,1312 snp148Mult,1372 snp148Mult,1392 snp148Mult,1424 snp148Mult,1443 snp148Mult,1511 snp148Mult,1602 snp148Mult,1696 snp148Mult,1791 snp148Mult,1817 snp148Mult,1841 snp148Mult,1847 snp148Mult,1878 snp148Mult,1895 snp148Mult,1991 snp148Mult,2028 transMapEnsemblV5,40 transMapEnsemblV5,276 transMapEnsemblV5,419 transMapEnsemblV5,423 transMapEnsemblV5,435 transMapEnsemblV5,481 transMapEstV5,245 transMapEstV5,388 transMapEstV5,392 transMapEstV5,404 transMapEstV5,450 transMapRefSeqV5,245 transMapRefSeqV5,388 transMapRefSeqV5,392 transMapRefSeqV5,404 transMapRefSeqV5,450 transMapRnaV5,245 transMapRnaV5,388 transMapRnaV5,392 transMapRnaV5,404 transMapRnaV5,450 transMapV5,351 transMapV5,494 transMapV5,498 transMapV5,510 transMapV5,556 windowmaskerSdust,25 windowmaskerSdust,39 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isolated est,452 intronEst,533 issue est,766 est,792 intronEst,850 intronEst,876 mrna,483 mrna,509 refGene,389 refGene,423 xenoRefGene,354 xenoRefGene,388 it chainEquCab2,89 chainEquCab2,276 chainEquCab2,530 chainEquCab2,542 chainHg38,89 chainHg38,276 chainHg38,530 chainHg38,542 chainMm10,89 chainMm10,276 chainMm10,530 chainMm10,542 chainNetEquCab2,92 chainNetEquCab2,279 chainNetEquCab2,533 chainNetEquCab2,545 chainNetHg38,92 chainNetHg38,279 chainNetHg38,533 chainNetHg38,545 chainNetMm10,92 chainNetMm10,279 chainNetMm10,533 chainNetMm10,545 chainNetRn6,94 chainNetRn6,281 chainNetRn6,536 chainNetRn6,548 chainRn6,91 chainRn6,278 chainRn6,533 chainRn6,545 est,91 est,105 est,514 gap,98 genscan,144 intronEst,172 intronEst,186 intronEst,595 netEquCab2,89 netEquCab2,276 netEquCab2,530 netEquCab2,542 netHg38,89 netHg38,276 netHg38,530 netHg38,542 netMm10,89 netMm10,276 netMm10,530 netMm10,542 netRn6,91 netRn6,278 netRn6,533 netRn6,545 snp148,115 snp148,473 snp148,493 snp148,1279 snp148Mult,84 snp148Mult,494 snp148Mult,514 snp148Mult,1300 item nestedRepeats,197 refGene,110 xenoRefGene,76 items chainEquCab2,494 chainHg38,494 chainMm10,494 chainNetEquCab2,497 chainNetHg38,497 chainNetMm10,497 chainNetRn6,500 chainRn6,497 est,63 est,136 est,146 est,340 intronEst,217 intronEst,227 intronEst,421 mrna,44 mrna,82 mrna,92 mrna,286 nestedRepeats,171 nestedRepeats,180 netEquCab2,494 netHg38,494 netMm10,494 netRn6,497 refGene,137 snp148,45 xenoRefGene,103 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 snp148,1927 snp148Mult,158 snp148Mult,1948 iupac snp148,1061 snp148Mult,1082 j cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 est,755 est,779 genscan,221 intronEst,839 intronEst,863 mrna,472 mrna,496 nestedRepeats,341 refGene,368 rmsk,364 snp148,2258 snp148Mult,2279 transMapEnsemblV5,786 transMapEstV5,755 transMapRefSeqV5,755 transMapRnaV5,755 transMapV5,861 xenoRefGene,333 jan chainEquCab2,1103 chainHg38,1103 chainMm10,1103 chainNetEquCab2,1106 chainNetHg38,1106 chainNetMm10,1106 chainNetRn6,1109 chainRn6,1106 est,763 est,788 intronEst,847 intronEst,872 microsat,129 mrna,480 mrna,505 netEquCab2,1103 netHg38,1103 netMm10,1103 netRn6,1106 refGene,386 refGene,419 simpleRepeat,89 snp148,2276 snp148Mult,2297 windowmaskerSdust,108 xenoRefGene,351 xenoRefGene,384 jim chainEquCab2,959 chainEquCab2,986 chainEquCab2,1004 chainHg38,959 chainHg38,986 chainHg38,1004 chainMm10,959 chainMm10,986 chainMm10,1004 chainNetEquCab2,962 chainNetEquCab2,989 chainNetEquCab2,1007 chainNetHg38,962 chainNetHg38,989 chainNetHg38,1007 chainNetMm10,962 chainNetMm10,989 chainNetMm10,1007 chainNetRn6,965 chainNetRn6,992 chainNetRn6,1010 chainRn6,962 chainRn6,989 chainRn6,1007 netEquCab2,959 netEquCab2,986 netEquCab2,1004 netHg38,959 netHg38,986 netHg38,1004 netMm10,959 netMm10,986 netMm10,1004 netRn6,962 netRn6,989 netRn6,1007 joined chainEquCab2,122 chainHg38,122 chainMm10,122 chainNetEquCab2,125 chainNetHg38,125 chainNetMm10,125 chainNetRn6,127 chainRn6,124 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netEquCab2,122 netHg38,122 netMm10,122 netRn6,124 journal nestedRepeats,349 rmsk,372 jul chainNetRn6,5 chainNetRn6,70 chainNetRn6,305 chainNetRn6Viewchain,3 chainNetRn6Viewnet,3 chainRn6,4 chainRn6,67 chainRn6,302 cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 netRn6,4 netRn6,67 netRn6,302 jun geneid,172 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 jz transMapEnsemblV5,788 transMapEstV5,757 transMapRefSeqV5,757 transMapRnaV5,757 transMapV5,863 k augustusGene,269 est,749 intronEst,833 mrna,466 snp148,2264 snp148Mult,2285 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karlin genscan,149 genscan,210 karsch-mizrachi est,750 est,774 intronEst,834 intronEst,858 mrna,467 mrna,491 kasif genscan,194 kd refGene,354 refGene,396 xenoRefGene,319 xenoRefGene,361 kd-tree chainEquCab2,633 chainHg38,633 chainMm10,633 chainNetEquCab2,636 chainNetHg38,636 chainNetMm10,636 chainNetRn6,639 chainRn6,636 netEquCab2,633 netHg38,633 netMm10,633 netRn6,636 kd-trees chainEquCab2,651 chainHg38,651 chainMm10,651 chainNetEquCab2,654 chainNetHg38,654 chainNetMm10,654 chainNetRn6,657 chainRn6,654 netEquCab2,651 netHg38,651 netMm10,651 netRn6,654 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 kent chainEquCab2,960 chainEquCab2,987 chainEquCab2,1005 chainEquCab2,1040 chainEquCab2,1082 chainHg38,960 chainHg38,987 chainHg38,1005 chainHg38,1040 chainHg38,1082 chainMm10,960 chainMm10,987 chainMm10,1005 chainMm10,1040 chainMm10,1082 chainNetEquCab2,963 chainNetEquCab2,990 chainNetEquCab2,1008 chainNetEquCab2,1043 chainNetEquCab2,1085 chainNetHg38,963 chainNetHg38,990 chainNetHg38,1008 chainNetHg38,1043 chainNetHg38,1085 chainNetMm10,963 chainNetMm10,990 chainNetMm10,1008 chainNetMm10,1043 chainNetMm10,1085 chainNetRn6,966 chainNetRn6,993 chainNetRn6,1011 chainNetRn6,1046 chainNetRn6,1088 chainRn6,963 chainRn6,990 chainRn6,1008 chainRn6,1043 chainRn6,1085 est,798 intronEst,882 mrna,515 netEquCab2,960 netEquCab2,987 netEquCab2,1005 netEquCab2,1040 netEquCab2,1082 netHg38,960 netHg38,987 netHg38,1005 netHg38,1040 netHg38,1082 netMm10,960 netMm10,987 netMm10,1005 netMm10,1040 netMm10,1082 netRn6,963 netRn6,990 netRn6,1008 netRn6,1043 netRn6,1085 refGene,335 xenoRefGene,301 kept est,721 mrna,437 refGene,311 xenoRefGene,277 keywords snp148,1776 snp148Mult,1797 kholodov snp148,2255 snp148Mult,2276 km refGene,372 xenoRefGene,337 known chainEquCab2,910 chainHg38,910 chainMm10,910 chainNetEquCab2,913 chainNetHg38,913 chainNetMm10,913 chainNetRn6,916 chainRn6,913 gold,122 netEquCab2,910 netHg38,910 netMm10,910 netRn6,913 refGene,16 snp148,843 snp148,1321 snp148,1390 snp148Mult,864 snp148Mult,1342 snp148Mult,1411 xenoRefGene,15 kwok snp148,1625 snp148Mult,1646 l cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 snp148,2260 snp148Mult,2281 transMapEnsemblV5,720 transMapEstV5,689 transMapRefSeqV5,689 transMapRnaV5,689 transMapV5,795 lab augustusGene,253 label genscan,99 refGene,134 refGene,146 refGene,169 xenoRefGene,100 xenoRefGene,112 xenoRefGene,135 labeled nestedRepeats,132 refGene,139 xenoRefGene,105 labeling est,385 intronEst,466 labels nestedRepeats,161 refGene,111 xenoRefGene,77 labs snp148,1607 snp148Mult,1628 landrum refGene,369 xenoRefGene,334 langton transMapEnsemblV5,719 transMapEstV5,688 transMapRefSeqV5,688 transMapRnaV5,688 transMapV5,794 large snp148,1650 snp148Mult,1671 largely chainEquCab2,141 chainHg38,141 chainMm10,141 chainNetEquCab2,144 chainNetHg38,144 chainNetMm10,144 chainNetRn6,146 chainRn6,143 netEquCab2,141 netHg38,141 netMm10,141 netRn6,143 larger intronEst,150 largest chainEquCab2,389 chainHg38,389 chainMm10,389 chainNetEquCab2,392 chainNetHg38,392 chainNetMm10,392 chainNetRn6,395 chainRn6,392 netEquCab2,389 netHg38,389 netMm10,389 netRn6,392 lastz chainEquCab2,586 chainEquCab2,759 chainEquCab2,908 chainHg38,586 chainHg38,759 chainHg38,908 chainMm10,586 chainMm10,759 chainMm10,908 chainNetEquCab2,589 chainNetEquCab2,762 chainNetEquCab2,911 chainNetHg38,589 chainNetHg38,762 chainNetHg38,911 chainNetMm10,589 chainNetMm10,762 chainNetMm10,911 chainNetRn6,592 chainNetRn6,765 chainNetRn6,914 chainRn6,589 chainRn6,762 chainRn6,911 netEquCab2,586 netEquCab2,759 netEquCab2,908 netHg38,586 netHg38,759 netHg38,908 netMm10,586 netMm10,759 netMm10,908 netRn6,589 netRn6,762 netRn6,911 transMapV5,47 lau transMapEnsemblV5,731 transMapEstV5,700 transMapRefSeqV5,700 transMapRnaV5,700 transMapV5,806 lavtoaxt chainEquCab2,604 chainHg38,604 chainMm10,604 chainNetEquCab2,607 chainNetHg38,607 chainNetMm10,607 chainNetRn6,610 chainRn6,607 netEquCab2,604 netHg38,604 netMm10,604 netRn6,607 leading snp148,593 snp148Mult,614 least est,712 intronEst,67 intronEst,82 intronEst,793 microsat,29 microsat,78 mrna,428 refGene,302 snp148,393 snp148,408 snp148,413 snp148,579 snp148,616 snp148,644 snp148,928 snp148,1022 snp148,1053 snp148,1259 snp148,1336 snp148,1364 snp148,1405 snp148,1409 snp148,1424 snp148,1476 snp148Mult,414 snp148Mult,429 snp148Mult,434 snp148Mult,600 snp148Mult,637 snp148Mult,665 snp148Mult,949 snp148Mult,1043 snp148Mult,1074 snp148Mult,1280 snp148Mult,1357 snp148Mult,1385 snp148Mult,1426 snp148Mult,1430 snp148Mult,1445 snp148Mult,1497 xenoRefGene,268 length augustusGene,83 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 est,36 est,660 genscan,40 intronEst,48 intronEst,86 intronEst,741 snp148,339 snp148,341 snp148,1101 snp148,1841 snp148,1848 snp148Mult,360 snp148Mult,362 snp148Mult,1122 snp148Mult,1862 snp148Mult,1869 less refGene,266 transMapEnsemblV5,373 transMapEstV5,342 transMapRefSeqV5,342 transMapRnaV5,342 transMapV5,448 xenoRefGene,232 level chainEquCab2,384 chainEquCab2,418 chainEquCab2,423 chainEquCab2,430 chainEquCab2,488 chainEquCab2,515 chainEquCab2,528 chainEquCab2,560 chainHg38,384 chainHg38,418 chainHg38,423 chainHg38,430 chainHg38,488 chainHg38,515 chainHg38,528 chainHg38,560 chainMm10,384 chainMm10,418 chainMm10,423 chainMm10,430 chainMm10,488 chainMm10,515 chainMm10,528 chainMm10,560 chainNetEquCab2,387 chainNetEquCab2,421 chainNetEquCab2,426 chainNetEquCab2,433 chainNetEquCab2,491 chainNetEquCab2,518 chainNetEquCab2,531 chainNetEquCab2,563 chainNetHg38,387 chainNetHg38,421 chainNetHg38,426 chainNetHg38,433 chainNetHg38,491 chainNetHg38,518 chainNetHg38,531 chainNetHg38,563 chainNetMm10,387 chainNetMm10,421 chainNetMm10,426 chainNetMm10,433 chainNetMm10,491 chainNetMm10,518 chainNetMm10,531 chainNetMm10,563 chainNetRn6,390 chainNetRn6,424 chainNetRn6,429 chainNetRn6,436 chainNetRn6,494 chainNetRn6,521 chainNetRn6,534 chainNetRn6,566 chainRn6,387 chainRn6,421 chainRn6,426 chainRn6,433 chainRn6,491 chainRn6,518 chainRn6,531 chainRn6,563 est,704 intronEst,96 intronEst,785 mrna,420 netEquCab2,384 netEquCab2,418 netEquCab2,423 netEquCab2,430 netEquCab2,488 netEquCab2,515 netEquCab2,528 netEquCab2,560 netHg38,384 netHg38,418 netHg38,423 netHg38,430 netHg38,488 netHg38,515 netHg38,528 netHg38,560 netMm10,384 netMm10,418 netMm10,423 netMm10,430 netMm10,488 netMm10,515 netMm10,528 netMm10,560 netRn6,387 netRn6,421 netRn6,426 netRn6,433 netRn6,491 netRn6,518 netRn6,531 netRn6,563 refGene,95 refGene,294 rmsk,205 xenoRefGene,61 xenoRefGene,260 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 snp148,157 snp148Mult,178 libraries est,558 intronEst,639 nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 refGene,104 xenoRefGene,70 lighter rmsk,237 like chainEquCab2,47 chainEquCab2,55 chainHg38,47 chainHg38,55 chainMm10,47 chainMm10,55 chainNetEquCab2,50 chainNetEquCab2,58 chainNetHg38,50 chainNetHg38,58 chainNetMm10,50 chainNetMm10,58 chainNetRn6,51 chainNetRn6,59 chainRn6,48 chainRn6,56 netEquCab2,47 netEquCab2,55 netHg38,47 netHg38,55 netMm10,47 netMm10,55 netRn6,48 netRn6,56 snp148,1975 snp148Mult,1996 likely augustusGene,112 microsat,17 transMapV5,94 likewise snp148,1869 snp148Mult,1890 line chainEquCab2,466 chainHg38,466 chainMm10,466 chainNetEquCab2,469 chainNetHg38,469 chainNetMm10,469 chainNetRn6,472 chainRn6,469 gap,106 gold,125 nestedRepeats,151 netEquCab2,466 netHg38,466 netMm10,466 netRn6,469 rmsk,165 line-up chainEquCab2,533 chainHg38,533 chainMm10,533 chainNetEquCab2,536 chainNetHg38,536 chainNetMm10,536 chainNetRn6,539 chainRn6,536 netEquCab2,533 netHg38,533 netMm10,533 netRn6,536 line-ups chainEquCab2,518 chainHg38,518 chainMm10,518 chainNetEquCab2,521 chainNetHg38,521 chainNetMm10,521 chainNetRn6,524 chainRn6,521 netEquCab2,518 netHg38,518 netMm10,518 netRn6,521 lineage transMapEnsemblV5,808 transMapEstV5,777 transMapRefSeqV5,777 transMapRnaV5,777 transMapV5,883 lineage-specific chainEquCab2,934 chainHg38,934 chainMm10,934 chainNetEquCab2,937 chainNetHg38,937 chainNetMm10,937 chainNetRn6,940 chainRn6,937 netEquCab2,934 netHg38,934 netMm10,934 netRn6,937 linear chainEquCab2,693 chainHg38,693 chainMm10,693 chainNetEquCab2,696 chainNetHg38,696 chainNetMm10,696 chainNetRn6,699 chainRn6,696 netEquCab2,693 netHg38,693 netMm10,693 netRn6,696 lineargap chainEquCab2,699 chainHg38,699 chainMm10,699 chainNetEquCab2,702 chainNetHg38,702 chainNetMm10,702 chainNetRn6,705 chainRn6,702 netEquCab2,699 netHg38,699 netMm10,699 netRn6,702 lines chainEquCab2,129 chainEquCab2,136 chainEquCab2,158 chainEquCab2,446 chainHg38,129 chainHg38,136 chainHg38,158 chainHg38,446 chainMm10,129 chainMm10,136 chainMm10,158 chainMm10,446 chainNetEquCab2,132 chainNetEquCab2,139 chainNetEquCab2,161 chainNetEquCab2,449 chainNetHg38,132 chainNetHg38,139 chainNetHg38,161 chainNetHg38,449 chainNetMm10,132 chainNetMm10,139 chainNetMm10,161 chainNetMm10,449 chainNetRn6,134 chainNetRn6,141 chainNetRn6,163 chainNetRn6,452 chainRn6,131 chainRn6,138 chainRn6,160 chainRn6,449 nestedRepeats,131 netEquCab2,129 netEquCab2,136 netEquCab2,158 netEquCab2,446 netHg38,129 netHg38,136 netHg38,158 netHg38,446 netMm10,129 netMm10,136 netMm10,158 netMm10,446 netRn6,131 netRn6,138 netRn6,160 netRn6,449 snp148,2177 snp148Mult,2198 link gc5BaseBw,64 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 lipman est,752 est,776 intronEst,836 intronEst,860 mrna,469 mrna,493 list est,210 intronEst,291 mrna,156 snp148,1730 snp148,2235 snp148Mult,1751 snp148Mult,2256 lists snp148,1762 snp148Mult,1783 loaded windowmaskerSdust,79 local chainEquCab2,109 chainEquCab2,180 chainHg38,109 chainHg38,180 chainMm10,109 chainMm10,180 chainNetEquCab2,112 chainNetEquCab2,183 chainNetHg38,112 chainNetHg38,183 chainNetMm10,112 chainNetMm10,183 chainNetRn6,114 chainNetRn6,185 chainRn6,111 chainRn6,182 nestedRepeats,98 netEquCab2,109 netEquCab2,180 netHg38,109 netHg38,180 netMm10,109 netMm10,180 netRn6,111 netRn6,182 located simpleRepeat,21 snp148,540 snp148,552 snp148Mult,561 snp148Mult,573 location chainEquCab2,248 chainHg38,248 chainMm10,248 chainNetEquCab2,251 chainNetHg38,251 chainNetMm10,251 chainNetRn6,253 chainRn6,250 netEquCab2,248 netHg38,248 netMm10,248 netRn6,250 snp148,903 snp148,961 snp148,2077 snp148Mult,924 snp148Mult,982 snp148Mult,2098 transMapEnsemblV5,402 transMapEnsemblV5,412 transMapEnsemblV5,479 transMapEstV5,371 transMapEstV5,381 transMapEstV5,448 transMapRefSeqV5,371 transMapRefSeqV5,381 transMapRefSeqV5,448 transMapRnaV5,371 transMapRnaV5,381 transMapRnaV5,448 transMapV5,477 transMapV5,487 transMapV5,554 locations gap,3 snp148,64 snp148,95 snp148,110 snp148,1895 snp148,1911 snp148Mult,59 snp148Mult,79 snp148Mult,1916 snp148Mult,1932 transMapEnsemblV5,491 transMapEstV5,460 transMapRefSeqV5,460 transMapRnaV5,460 transMapV5,566 loci snp148Mult,14 locus snp148,795 snp148Mult,816 locus-specific snp148,1264 snp148,1354 snp148,1361 snp148Mult,1285 snp148Mult,1375 snp148Mult,1382 log-likelihood geneid,112 logic est,288 intronEst,369 mrna,234 long est,675 intronEst,756 rmsk,161 rmsk,166 snp148,1103 snp148Mult,1124 long-established transMapEnsemblV5,803 transMapEstV5,772 transMapRefSeqV5,772 transMapRnaV5,772 transMapV5,878 longer chainEquCab2,81 chainHg38,81 chainMm10,81 chainNetEquCab2,84 chainNetHg38,84 chainNetMm10,84 chainNetRn6,86 chainRn6,83 netEquCab2,81 netHg38,81 netMm10,81 netRn6,83 snp148,610 snp148,1875 snp148Mult,631 snp148Mult,1896 longest chainEquCab2,511 chainHg38,511 chainMm10,511 chainNetEquCab2,514 chainNetHg38,514 chainNetMm10,514 chainNetRn6,517 chainRn6,514 netEquCab2,511 netHg38,511 netMm10,511 netRn6,514 look chainEquCab2,46 chainHg38,46 chainMm10,46 chainNetEquCab2,49 chainNetHg38,49 chainNetMm10,49 chainNetRn6,50 chainRn6,47 netEquCab2,46 netHg38,46 netMm10,46 netRn6,47 losses transMapEnsemblV5,801 transMapEstV5,770 transMapRefSeqV5,770 transMapRnaV5,770 transMapV5,876 low nestedRepeats,39 rmsk,29 rmsk,181 lowe transMapEnsemblV5,791 transMapEstV5,760 transMapRefSeqV5,760 transMapRnaV5,760 transMapV5,866 lower chainEquCab2,487 chainHg38,487 chainMm10,487 chainNetEquCab2,490 chainNetHg38,490 chainNetMm10,490 chainNetRn6,493 chainRn6,490 netEquCab2,487 netHg38,487 netMm10,487 netRn6,490 snp148,2010 snp148Mult,2031 lower-level chainEquCab2,850 chainEquCab2,856 chainHg38,850 chainHg38,856 chainMm10,850 chainMm10,856 chainNetEquCab2,853 chainNetEquCab2,859 chainNetHg38,853 chainNetHg38,859 chainNetMm10,853 chainNetMm10,859 chainNetRn6,856 chainNetRn6,862 chainRn6,853 chainRn6,859 netEquCab2,850 netEquCab2,856 netHg38,850 netHg38,856 netMm10,850 netMm10,856 netRn6,853 netRn6,859 ltr rmsk,170 m augustusGene,288 augustusGene,290 augustusGene,318 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 est,747 intronEst,831 mrna,464 snp148,2256 snp148Mult,2277 transMapEnsemblV5,715 transMapEnsemblV5,722 transMapEnsemblV5,756 transMapEnsemblV5,758 transMapEnsemblV5,790 transMapEstV5,684 transMapEstV5,691 transMapEstV5,725 transMapEstV5,727 transMapEstV5,759 transMapRefSeqV5,684 transMapRefSeqV5,691 transMapRefSeqV5,725 transMapRefSeqV5,727 transMapRefSeqV5,759 transMapRnaV5,684 transMapRnaV5,691 transMapRnaV5,725 transMapRnaV5,727 transMapRnaV5,759 transMapV5,790 transMapV5,797 transMapV5,831 transMapV5,833 transMapV5,865 made rmsk,110 transMapEnsemblV5,394 transMapEstV5,363 transMapRefSeqV5,363 transMapRnaV5,363 transMapV5,469 maf snp148,1394 snp148,1413 snp148Mult,1415 snp148Mult,1434 maglott refGene,399 xenoRefGene,364 mailing snp148,2234 snp148Mult,2255 make est,447 est,513 gold,76 intronEst,528 intronEst,594 refGene,51 rmsk,123 transMapEnsemblV5,428 transMapEstV5,397 transMapRefSeqV5,397 transMapRnaV5,397 transMapV5,503 makedb rmsk,131 mammalian nestedRepeats,368 nestedRepeats,382 refGene,379 rmsk,391 rmsk,405 xenoRefGene,344 man snp148,1298 snp148Mult,1319 many chainEquCab2,397 chainHg38,397 chainMm10,397 chainNetEquCab2,400 chainNetHg38,400 chainNetMm10,400 chainNetRn6,403 chainRn6,400 est,145 intronEst,111 intronEst,226 mrna,91 netEquCab2,397 netHg38,397 netMm10,397 netRn6,400 snp148,1632 snp148Mult,1653 map chainEquCab2,325 chainHg38,325 chainMm10,325 chainNetEquCab2,328 chainNetHg38,328 chainNetMm10,328 chainNetRn6,331 chainRn6,328 netEquCab2,325 netHg38,325 netMm10,325 netRn6,328 snp148,91 snp148,107 snp148Mult,10 snp148Mult,76 transMapEnsemblV5,293 transMapEstV5,262 transMapRefSeqV5,262 transMapRnaV5,262 transMapV5,368 mapped augustusGene,299 nestedRepeats,233 snp148,61 snp148,900 snp148,935 snp148,1135 snp148,1479 snp148,1487 snp148Mult,56 snp148Mult,921 snp148Mult,956 snp148Mult,1156 snp148Mult,1500 snp148Mult,1508 transMapEnsemblV5,379 transMapEnsemblV5,411 transMapEnsemblV5,469 transMapEnsemblV5,767 transMapEstV5,348 transMapEstV5,380 transMapEstV5,438 transMapEstV5,736 transMapRefSeqV5,348 transMapRefSeqV5,380 transMapRefSeqV5,438 transMapRefSeqV5,736 transMapRnaV5,348 transMapRnaV5,380 transMapRnaV5,438 transMapRnaV5,736 transMapV5,131 transMapV5,454 transMapV5,486 transMapV5,544 transMapV5,842 mapping cytoBandIdeo,7 gap,4 gc5BaseBw,8 gold,5 snp148,859 snp148Mult,880 transMapEnsemblV5,266 transMapEnsemblV5,286 transMapEnsemblV5,299 transMapEstV5,235 transMapEstV5,255 transMapEstV5,268 transMapRefSeqV5,235 transMapRefSeqV5,255 transMapRefSeqV5,268 transMapRnaV5,235 transMapRnaV5,255 transMapRnaV5,268 transMapV5,341 transMapV5,361 transMapV5,374 ucscToINSDC,10 ucscToRefSeq,5 mappings snp148,1928 snp148Mult,1949 transMapEnsemblV5,7 transMapEnsemblV5,501 transMapEstV5,5 transMapEstV5,470 transMapRefSeqV5,6 transMapRefSeqV5,470 transMapRnaV5,6 transMapRnaV5,470 transMapV5,576 maps transMapEnsemblV5,475 transMapEnsemblV5,488 transMapEstV5,444 transMapEstV5,457 transMapRefSeqV5,444 transMapRefSeqV5,457 transMapRnaV5,444 transMapRnaV5,457 transMapV5,72 transMapV5,550 transMapV5,563 mar augustusGene,310 transMapEnsemblV5,778 transMapEstV5,747 transMapRefSeqV5,747 transMapRnaV5,747 transMapV5,853 mario augustusGene,103 augustusGene,284 mark est,534 intronEst,615 snp148,191 snp148Mult,212 transMapEnsemblV5,680 transMapEstV5,649 transMapRefSeqV5,649 transMapRnaV5,649 transMapV5,755 markers microsat,23 markov augustusGene,326 geneid,116 marks snp148,153 snp148Mult,174 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 rmsk,71 windowmaskerSdust,5 windowmaskerSdust,16 masker windowmaskerSdust,102 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainEquCab2,253 chainEquCab2,512 chainEquCab2,550 chainHg38,253 chainHg38,512 chainHg38,550 chainMm10,253 chainMm10,512 chainMm10,550 chainNetEquCab2,256 chainNetEquCab2,515 chainNetEquCab2,553 chainNetHg38,256 chainNetHg38,515 chainNetHg38,553 chainNetMm10,256 chainNetMm10,515 chainNetMm10,553 chainNetRn6,258 chainNetRn6,518 chainNetRn6,556 chainRn6,255 chainRn6,515 chainRn6,553 est,82 est,298 est,313 est,354 est,372 intronEst,163 intronEst,379 intronEst,394 intronEst,435 intronEst,453 mrna,244 mrna,259 mrna,300 mrna,318 netEquCab2,253 netEquCab2,512 netEquCab2,550 netHg38,253 netHg38,512 netHg38,550 netMm10,253 netMm10,512 netMm10,550 netRn6,255 netRn6,515 netRn6,553 snp148,1074 snp148,1125 snp148,1471 snp148,1985 snp148Mult,1095 snp148Mult,1146 snp148Mult,1492 snp148Mult,2006 matches est,70 mrna,51 snp148,1144 snp148Mult,1165 matching chainEquCab2,256 chainHg38,256 chainMm10,256 chainNetEquCab2,259 chainNetHg38,259 chainNetMm10,259 chainNetRn6,261 chainRn6,258 est,88 intronEst,169 netEquCab2,256 netHg38,256 netMm10,256 netRn6,258 snp148,2013 snp148Mult,2034 matrix chainEquCab2,663 chainEquCab2,695 chainHg38,663 chainHg38,695 chainMm10,663 chainMm10,695 chainNetEquCab2,666 chainNetEquCab2,698 chainNetHg38,666 chainNetHg38,698 chainNetMm10,666 chainNetMm10,698 chainNetRn6,669 chainNetRn6,701 chainRn6,666 chainRn6,698 netEquCab2,663 netEquCab2,695 netHg38,663 netHg38,695 netMm10,663 netMm10,695 netRn6,666 netRn6,698 mature est,504 intronEst,585 maximally chainEquCab2,655 chainHg38,655 chainMm10,655 chainNetEquCab2,658 chainNetHg38,658 chainNetMm10,658 chainNetRn6,661 chainRn6,658 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netEquCab2,655 netHg38,655 netMm10,655 netRn6,658 maximizing geneid,133 maximum est,658 intronEst,739 snp148,72 snp148,1578 snp148Mult,112 snp148Mult,129 snp148Mult,159 snp148Mult,1599 maxtracks augustusGene,140 may chainEquCab2,171 chainEquCab2,426 chainHg38,171 chainHg38,426 chainMm10,171 chainMm10,426 chainNetEquCab2,174 chainNetEquCab2,429 chainNetHg38,174 chainNetHg38,429 chainNetMm10,174 chainNetMm10,429 chainNetRn6,176 chainNetRn6,432 chainRn6,173 chainRn6,429 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 est,141 est,260 est,270 est,378 est,429 est,509 est,511 est,523 est,525 est,545 est,669 gc5BaseBw,41 intronEst,222 intronEst,341 intronEst,351 intronEst,459 intronEst,510 intronEst,590 intronEst,592 intronEst,604 intronEst,606 intronEst,626 intronEst,750 mrna,87 mrna,206 mrna,216 mrna,324 mrna,368 nestedRepeats,268 nestedRepeats,290 netEquCab2,171 netEquCab2,426 netHg38,171 netHg38,426 netMm10,171 netMm10,426 netRn6,173 netRn6,429 rmsk,297 rmsk,307 simpleRepeat,43 snp148,382 snp148,465 snp148,608 snp148,853 snp148,947 snp148,989 snp148,1017 snp148,1176 snp148,1200 snp148,1385 snp148,1387 snp148,1646 snp148,1950 snp148Mult,403 snp148Mult,486 snp148Mult,629 snp148Mult,874 snp148Mult,968 snp148Mult,1010 snp148Mult,1038 snp148Mult,1197 snp148Mult,1221 snp148Mult,1406 snp148Mult,1408 snp148Mult,1667 snp148Mult,1971 transMapEnsemblV5,108 transMapEnsemblV5,143 transMapEstV5,77 transMapEstV5,112 transMapRefSeqV5,77 transMapRefSeqV5,112 transMapRnaV5,77 transMapRnaV5,112 transMapV5,183 transMapV5,218 mcgarvey refGene,371 xenoRefGene,336 mdash est,483 est,487 intronEst,564 intronEst,568 snp148,27 snp148,32 snp148Mult,37 snp148Mult,42 medium chainEquCab2,700 chainHg38,700 chainMm10,700 chainNetEquCab2,703 chainNetHg38,703 chainNetMm10,703 chainNetRn6,706 chainRn6,703 netEquCab2,700 netHg38,700 netMm10,700 netRn6,703 refGene,106 xenoRefGene,72 mellifera augustusGene,217 mementos nestedRepeats,377 rmsk,400 mendelian snp148,1295 snp148,1304 snp148Mult,1316 snp148Mult,1325 mentioned snp148,1292 snp148Mult,1313 menu refGene,207 xenoRefGene,173 merely snp148,135 snp148Mult,104 method snp148,374 snp148,389 snp148,420 snp148Mult,395 snp148Mult,410 snp148Mult,441 methods augustusGene,47 chainEquCab2,562 chainEquCab2,763 chainHg38,562 chainHg38,763 chainMm10,562 chainMm10,763 chainNetEquCab2,565 chainNetEquCab2,766 chainNetHg38,565 chainNetHg38,766 chainNetMm10,565 chainNetMm10,766 chainNetRn6,568 chainNetRn6,769 chainRn6,565 chainRn6,766 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 est,445 geneid,50 genscan,131 genscan,198 intronEst,526 microsat,45 mrna,384 nestedRepeats,244 netEquCab2,562 netEquCab2,763 netHg38,562 netHg38,763 netMm10,562 netMm10,763 netRn6,565 netRn6,766 refGene,250 rmsk,286 simpleRepeat,55 snp148,2024 snp148Mult,2045 transMapEnsemblV5,152 transMapEstV5,121 transMapRefSeqV5,121 transMapRnaV5,121 transMapV5,227 windowmaskerSdust,46 xenoRefGene,216 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 mh snp148,2254 snp148Mult,2275 mica geneid,44 sgpGene,53 micro-satellites rmsk,180 microattribution snp148,1332 snp148Mult,1353 microsatellite microsat,1 microsat,22 snp148,275 snp148Mult,296 microsatellites microsat,2 might est,106 est,678 intronEst,187 intronEst,759 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller chainEquCab2,928 chainEquCab2,965 chainEquCab2,1026 chainEquCab2,1046 chainEquCab2,1094 chainHg38,928 chainHg38,965 chainHg38,1026 chainHg38,1046 chainHg38,1094 chainMm10,928 chainMm10,965 chainMm10,1026 chainMm10,1046 chainMm10,1094 chainNetEquCab2,931 chainNetEquCab2,968 chainNetEquCab2,1029 chainNetEquCab2,1049 chainNetEquCab2,1097 chainNetHg38,931 chainNetHg38,968 chainNetHg38,1029 chainNetHg38,1049 chainNetHg38,1097 chainNetMm10,931 chainNetMm10,968 chainNetMm10,1029 chainNetMm10,1049 chainNetMm10,1097 chainNetRn6,934 chainNetRn6,971 chainNetRn6,1032 chainNetRn6,1052 chainNetRn6,1100 chainRn6,931 chainRn6,968 chainRn6,1029 chainRn6,1049 chainRn6,1097 netEquCab2,928 netEquCab2,965 netEquCab2,1026 netEquCab2,1046 netEquCab2,1094 netHg38,928 netHg38,965 netHg38,1026 netHg38,1046 netHg38,1094 netMm10,928 netMm10,965 netMm10,1026 netMm10,1046 netMm10,1094 netRn6,931 netRn6,968 netRn6,1029 netRn6,1049 netRn6,1097 minexonintronprob augustusGene,136 minimum chainEquCab2,676 chainHg38,676 chainMm10,676 chainNetEquCab2,679 chainNetHg38,679 chainNetMm10,679 chainNetRn6,682 chainRn6,679 netEquCab2,676 netHg38,676 netMm10,676 netRn6,679 minmeanexonintronprob augustusGene,138 minmei chainEquCab2,920 chainHg38,920 chainMm10,920 chainNetEquCab2,923 chainNetHg38,923 chainNetMm10,923 chainNetRn6,926 chainRn6,923 netEquCab2,920 netHg38,920 netMm10,920 netRn6,923 minor snp148,1400 snp148,1419 snp148Mult,1421 snp148Mult,1440 miscellaneous snp148,1233 snp148,2161 snp148Mult,1254 snp148Mult,2182 mismatch rmsk,218 snp148,930 snp148Mult,951 miso snp148,496 snp148Mult,517 missense snp148,637 snp148Mult,658 missense_variant snp148,601 snp148,804 snp148Mult,622 snp148Mult,825 mixed snp148,320 snp148,915 snp148,1095 snp148Mult,341 snp148Mult,936 snp148Mult,1116 mixedobserved snp148,893 snp148Mult,914 mj refGene,370 xenoRefGene,335 mk_counts windowmaskerSdust,59 mm10 chainMm10,7 chainMm10,69 chainMm10,303 chainNetMm10,8 chainNetMm10,72 chainNetMm10,306 chainNetMm10Viewchain,6 chainNetMm10Viewnet,6 netMm10,7 netMm10,69 netMm10,303 mnp snp148,331 snp148,1093 snp148Mult,352 snp148Mult,1114 mode chainEquCab2,381 chainHg38,381 chainMm10,381 chainNetEquCab2,384 chainNetHg38,384 chainNetMm10,384 chainNetRn6,387 chainRn6,384 est,61 est,126 gold,69 intronEst,145 intronEst,207 mrna,42 mrna,72 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netEquCab2,381 netHg38,381 netMm10,381 netRn6,384 rmsk,142 model augustusGene,122 augustusGene,327 geneid,117 genscan,141 modeling genscan,183 models augustusGene,50 augustusGene,66 augustusGene,98 augustusGene,146 augustusGene,179 genscan,159 modes chainEquCab2,238 chainHg38,238 chainMm10,238 chainNetEquCab2,241 chainNetHg38,241 chainNetMm10,241 chainNetRn6,243 chainRn6,240 netEquCab2,238 netHg38,238 netMm10,238 netRn6,240 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modified rmsk,57 mol cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 genscan,222 molecular genscan,200 molecule snp148,817 snp148,2185 snp148Mult,838 snp148Mult,2206 more augustusGene,36 chainEquCab2,160 chainEquCab2,220 chainHg38,160 chainHg38,220 chainMm10,160 chainMm10,220 chainNetEquCab2,163 chainNetEquCab2,223 chainNetHg38,163 chainNetHg38,223 chainNetMm10,163 chainNetMm10,223 chainNetRn6,165 chainNetRn6,225 chainRn6,162 chainRn6,222 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 est,66 est,173 est,280 est,410 est,434 genscan,51 genscan,126 genscan,164 intronEst,254 intronEst,361 intronEst,491 intronEst,515 microsat,96 mrna,47 mrna,119 mrna,226 mrna,347 mrna,373 nestedRepeats,211 nestedRepeats,300 netEquCab2,160 netEquCab2,220 netHg38,160 netHg38,220 netMm10,160 netMm10,220 netRn6,162 netRn6,222 refGene,65 refGene,209 rmsk,323 simpleRepeat,57 snp148,221 snp148,386 snp148,467 snp148,958 snp148,1004 snp148,1163 snp148,1329 snp148,1753 snp148,2248 snp148Mult,242 snp148Mult,407 snp148Mult,488 snp148Mult,979 snp148Mult,1025 snp148Mult,1184 snp148Mult,1350 snp148Mult,1774 snp148Mult,2269 transMapEnsemblV5,131 transMapEnsemblV5,148 transMapEnsemblV5,223 transMapEnsemblV5,268 transMapEnsemblV5,290 transMapEnsemblV5,566 transMapEstV5,100 transMapEstV5,117 transMapEstV5,192 transMapEstV5,237 transMapEstV5,259 transMapEstV5,535 transMapRefSeqV5,100 transMapRefSeqV5,117 transMapRefSeqV5,192 transMapRefSeqV5,237 transMapRefSeqV5,259 transMapRefSeqV5,535 transMapRnaV5,100 transMapRnaV5,117 transMapRnaV5,192 transMapRnaV5,237 transMapRnaV5,259 transMapRnaV5,535 transMapV5,63 transMapV5,107 transMapV5,164 transMapV5,206 transMapV5,223 transMapV5,298 transMapV5,343 transMapV5,365 transMapV5,641 xenoRefGene,175 morgulis windowmaskerSdust,90 most augustusGene,94 augustusGene,111 est,482 intronEst,563 nestedRepeats,249 snp148,155 snp148Mult,176 transMapV5,93 mouse chainEquCab2,1059 chainHg38,1059 chainMm10,1 chainMm10,3 chainMm10,65 chainMm10,96 chainMm10,148 chainMm10,266 chainMm10,291 chainMm10,572 chainMm10,620 chainMm10,1059 chainNetEquCab2,1062 chainNetHg38,1062 chainNetMm10,1 chainNetMm10,4 chainNetMm10,68 chainNetMm10,99 chainNetMm10,151 chainNetMm10,269 chainNetMm10,294 chainNetMm10,575 chainNetMm10,623 chainNetMm10,1062 chainNetMm10Viewchain,2 chainNetMm10Viewnet,2 chainNetRn6,1065 chainRn6,1062 netEquCab2,1059 netHg38,1059 netMm10,1 netMm10,3 netMm10,65 netMm10,96 netMm10,148 netMm10,266 netMm10,291 netMm10,572 netMm10,620 netMm10,1059 netRn6,1062 transMapEnsemblV5,45 transMapEnsemblV5,365 transMapEstV5,334 transMapRefSeqV5,334 transMapRnaV5,334 transMapV5,440 mrna est,7 est,505 est,521 est,604 intronEst,9 intronEst,586 intronEst,602 intronEst,685 mrna,7 mrna,13 mrna,127 mrna,400 mrna,440 mrna,447 transMapEnsemblV5,456 transMapEstV5,425 transMapRefSeqV5,425 transMapRnaV5,19 transMapRnaV5,425 transMapV5,100 transMapV5,531 mrnas mrna,2 mrna,4 mrna,19 mrna,137 mrna,242 mrna,257 mrna,298 mrna,316 mrna,341 mrna,387 transMapEnsemblV5,173 transMapEstV5,142 transMapRefSeqV5,142 transMapRnaV5,142 transMapV5,111 transMapV5,248 much chainEquCab2,877 chainEquCab2,894 chainHg38,877 chainHg38,894 chainMm10,877 chainMm10,894 chainNetEquCab2,880 chainNetEquCab2,897 chainNetHg38,880 chainNetHg38,897 chainNetMm10,880 chainNetMm10,897 chainNetRn6,883 chainNetRn6,900 chainRn6,880 chainRn6,897 nestedRepeats,210 netEquCab2,877 netEquCab2,894 netHg38,877 netHg38,894 netMm10,877 netMm10,894 netRn6,880 netRn6,897 mult snp148,52 snp148,1592 snp148Mult,1 snp148Mult,1613 multiple chainEquCab2,192 chainHg38,192 chainMm10,192 chainNetEquCab2,195 chainNetHg38,195 chainNetMm10,195 chainNetRn6,197 chainRn6,194 est,258 est,687 intronEst,339 intronEst,768 mrna,204 mrna,403 netEquCab2,192 netHg38,192 netMm10,192 netRn6,194 refGene,277 snp148,63 snp148,93 snp148,109 snp148,209 snp148,326 snp148,328 snp148,475 snp148,686 snp148,894 snp148Mult,12 snp148Mult,58 snp148Mult,78 snp148Mult,230 snp148Mult,347 snp148Mult,349 snp148Mult,496 snp148Mult,707 snp148Mult,915 transMapEnsemblV5,499 transMapEstV5,468 transMapRefSeqV5,468 transMapRnaV5,468 transMapV5,574 xenoRefGene,243 multiplealignments snp148,950 snp148Mult,971 multiply-mapped snp148Mult,136 must intronEst,62 intronEst,79 mutation chainEquCab2,181 chainHg38,181 chainMm10,181 chainNetEquCab2,184 chainNetHg38,184 chainNetMm10,184 chainNetRn6,186 chainRn6,183 netEquCab2,181 netHg38,181 netMm10,181 netRn6,183 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 snp148,2228 snp148Mult,2249 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 snp148,1067 snp148Mult,1088 name chainEquCab2,363 chainHg38,363 chainMm10,363 chainNetEquCab2,366 chainNetHg38,366 chainNetMm10,366 chainNetRn6,369 chainRn6,366 est,199 intronEst,280 mrna,145 nestedRepeats,136 netEquCab2,363 netHg38,363 netMm10,363 netRn6,366 refGene,142 refGene,152 refGene,157 snp148,301 snp148Mult,322 xenoRefGene,108 xenoRefGene,118 xenoRefGene,123 named snp148,290 snp148Mult,311 nameddeletionzerospan snp148,966 snp148Mult,987 namedinsertionnonzerospan snp148,992 snp148Mult,1013 names chainEquCab2,242 chainHg38,242 chainMm10,242 chainNetEquCab2,245 chainNetHg38,245 chainNetMm10,245 chainNetRn6,247 chainRn6,244 netEquCab2,242 netHg38,242 netMm10,242 netRn6,244 refGene,164 ucscToINSDC,22 ucscToINSDC,25 ucscToRefSeq,17 xenoRefGene,130 native augustusGene,296 transMapEnsemblV5,764 transMapEstV5,733 transMapRefSeqV5,733 transMapRnaV5,733 transMapV5,123 transMapV5,839 natl chainEquCab2,1064 chainHg38,1064 chainMm10,1064 chainNetEquCab2,1067 chainNetHg38,1067 chainNetMm10,1067 chainNetRn6,1070 chainRn6,1067 netEquCab2,1064 netHg38,1064 netMm10,1064 netRn6,1067 natural chainEquCab2,815 chainHg38,815 chainMm10,815 chainNetEquCab2,818 chainNetHg38,818 chainNetMm10,818 chainNetRn6,821 chainRn6,818 netEquCab2,815 netHg38,815 netMm10,815 netRn6,818 nbsp chainEquCab2,666 chainHg38,666 chainMm10,666 chainNetEquCab2,669 chainNetHg38,669 chainNetMm10,669 chainNetRn6,672 chainRn6,669 netEquCab2,666 netHg38,666 netMm10,666 netRn6,669 nc_006853.1 gold,160 nc_transcript_variant snp148,560 snp148Mult,581 ncbi gap,28 gap,31 gap,57 gold,30 gold,33 gold,56 refGene,25 refGene,331 refGene,401 snp148,919 snp148,1787 snp148,1792 snp148,2044 snp148,2267 snp148Mult,940 snp148Mult,1808 snp148Mult,1813 snp148Mult,2065 snp148Mult,2288 ucscToINSDC,40 ucscToRefSeq,23 ucscToRefSeq,34 windowmaskerSdust,29 windowmaskerSdust,43 xenoRefGene,28 xenoRefGene,297 xenoRefGene,366 ncrna snp148,572 snp148Mult,593 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 snp148,164 snp148,933 snp148Mult,185 snp148Mult,954 near-best transMapEnsemblV5,356 transMapEstV5,325 transMapRefSeqV5,325 transMapRnaV5,325 transMapV5,431 near-gene-3 snp148,547 snp148Mult,568 near-gene-5 snp148,559 snp148Mult,580 necessarily snp148,1208 snp148,1269 snp148Mult,1229 snp148Mult,1290 necessary chainEquCab2,799 chainHg38,799 chainMm10,799 chainNetEquCab2,802 chainNetHg38,802 chainNetMm10,802 chainNetRn6,805 chainRn6,802 netEquCab2,799 netHg38,799 netMm10,799 netRn6,802 neighboring snp148,1937 snp148Mult,1958 nematodes augustusGene,212 net chainEquCab2,34 chainEquCab2,258 chainEquCab2,261 chainEquCab2,376 chainEquCab2,753 chainHg38,34 chainHg38,258 chainHg38,261 chainHg38,376 chainHg38,753 chainMm10,34 chainMm10,258 chainMm10,261 chainMm10,376 chainMm10,753 chainNetEquCab2,3 chainNetEquCab2,11 chainNetEquCab2,37 chainNetEquCab2,261 chainNetEquCab2,264 chainNetEquCab2,379 chainNetEquCab2,756 chainNetEquCab2Viewchain,9 chainNetEquCab2Viewnet,1 chainNetEquCab2Viewnet,9 chainNetHg38,3 chainNetHg38,11 chainNetHg38,37 chainNetHg38,261 chainNetHg38,264 chainNetHg38,379 chainNetHg38,756 chainNetHg38Viewchain,9 chainNetHg38Viewnet,1 chainNetHg38Viewnet,9 chainNetMm10,3 chainNetMm10,11 chainNetMm10,37 chainNetMm10,261 chainNetMm10,264 chainNetMm10,379 chainNetMm10,756 chainNetMm10Viewchain,9 chainNetMm10Viewnet,1 chainNetMm10Viewnet,9 chainNetRn6,3 chainNetRn6,12 chainNetRn6,38 chainNetRn6,263 chainNetRn6,266 chainNetRn6,382 chainNetRn6,759 chainNetRn6Viewchain,10 chainNetRn6Viewnet,1 chainNetRn6Viewnet,10 chainRn6,35 chainRn6,260 chainRn6,263 chainRn6,379 chainRn6,756 netEquCab2,2 netEquCab2,9 netEquCab2,34 netEquCab2,258 netEquCab2,261 netEquCab2,376 netEquCab2,753 netHg38,2 netHg38,9 netHg38,34 netHg38,258 netHg38,261 netHg38,376 netHg38,753 netMm10,2 netMm10,9 netMm10,34 netMm10,258 netMm10,261 netMm10,376 netMm10,753 netRn6,2 netRn6,10 netRn6,35 netRn6,260 netRn6,263 netRn6,379 netRn6,756 transMapV5,140 netclass chainEquCab2,869 chainEquCab2,992 chainHg38,869 chainHg38,992 chainMm10,869 chainMm10,992 chainNetEquCab2,872 chainNetEquCab2,995 chainNetHg38,872 chainNetHg38,995 chainNetMm10,872 chainNetMm10,995 chainNetRn6,875 chainNetRn6,998 chainRn6,872 chainRn6,995 netEquCab2,869 netEquCab2,992 netHg38,869 netHg38,992 netMm10,869 netMm10,992 netRn6,872 netRn6,995 netfilter transMapEnsemblV5,253 transMapEstV5,222 transMapRefSeqV5,222 transMapRnaV5,222 transMapV5,328 nets chainEquCab2,979 chainHg38,979 chainMm10,979 chainNetEquCab2,982 chainNetHg38,982 chainNetMm10,982 chainNetRn6,985 chainRn6,982 netEquCab2,979 netHg38,979 netMm10,979 netRn6,982 transMapEnsemblV5,200 transMapEnsemblV5,242 transMapEnsemblV5,248 transMapEnsemblV5,262 transMapEstV5,169 transMapEstV5,211 transMapEstV5,217 transMapEstV5,231 transMapRefSeqV5,169 transMapRefSeqV5,211 transMapRefSeqV5,217 transMapRefSeqV5,231 transMapRnaV5,169 transMapRnaV5,211 transMapRnaV5,217 transMapRnaV5,231 transMapV5,89 transMapV5,275 transMapV5,317 transMapV5,323 transMapV5,337 netsyntenic chainEquCab2,837 chainEquCab2,990 chainHg38,837 chainHg38,990 chainMm10,837 chainMm10,990 chainNetEquCab2,840 chainNetEquCab2,993 chainNetHg38,840 chainNetHg38,993 chainNetMm10,840 chainNetMm10,993 chainNetRn6,843 chainNetRn6,996 chainRn6,840 chainRn6,993 netEquCab2,837 netEquCab2,990 netHg38,837 netHg38,990 netMm10,837 netMm10,990 netRn6,840 netRn6,993 new augustusGene,330 newer est,556 intronEst,637 nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next chainEquCab2,342 chainEquCab2,371 chainHg38,342 chainHg38,371 chainMm10,342 chainMm10,371 chainNetEquCab2,345 chainNetEquCab2,374 chainNetHg38,345 chainNetHg38,374 chainNetMm10,345 chainNetMm10,374 chainNetRn6,348 chainNetRn6,377 chainRn6,345 chainRn6,374 geneid,89 netEquCab2,342 netEquCab2,371 netHg38,342 netHg38,371 netMm10,342 netMm10,371 netRn6,345 netRn6,374 nig augustusGene,271 nm_ snp148,443 snp148Mult,464 no est,93 intronEst,174 microsat,73 snp148,308 snp148,367 snp148,422 snp148,501 snp148,514 snp148Mult,329 snp148Mult,388 snp148Mult,443 snp148Mult,522 snp148Mult,535 transMapEnsemblV5,222 transMapEstV5,191 transMapRefSeqV5,191 transMapRnaV5,191 transMapV5,297 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non snp148,566 snp148Mult,587 non-alignable chainEquCab2,49 chainHg38,49 chainMm10,49 chainNetEquCab2,52 chainNetHg38,52 chainNetMm10,52 chainNetRn6,53 chainRn6,50 netEquCab2,49 netHg38,49 netMm10,49 netRn6,50 non-coding augustusGene,76 refGene,226 xenoRefGene,192 non-computational snp148,419 snp148Mult,440 non-cow xenoRefGene,3 non-human snp148,1309 snp148Mult,1330 non-integer snp148,1029 snp148Mult,1050 non-mrna est,625 intronEst,706 non-overlapping snp148,1447 snp148,1460 snp148Mult,1468 snp148Mult,1481 non-protein-coding refGene,20 refGene,234 xenoRefGene,18 xenoRefGene,200 non-redundant refGene,407 xenoRefGene,372 non-repetitive snp148,1967 snp148Mult,1988 non-synonymous snp148,802 snp148Mult,823 nonintegerchromcount snp148,1020 snp148Mult,1041 nonsense snp148,600 snp148Mult,621 nonsyn chainEquCab2,548 chainHg38,548 chainMm10,548 chainNetEquCab2,551 chainNetHg38,551 chainNetMm10,551 chainNetRn6,554 chainRn6,551 netEquCab2,548 netHg38,548 netMm10,548 netRn6,551 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not chainEquCab2,804 chainHg38,804 chainMm10,804 chainNetEquCab2,807 chainNetHg38,807 chainNetMm10,807 chainNetRn6,810 chainRn6,807 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 est,350 est,485 est,512 est,526 intronEst,431 intronEst,566 intronEst,593 intronEst,607 mrna,296 netEquCab2,804 netHg38,804 netMm10,804 netRn6,807 rmsk,113 rmsk,313 snp148,139 snp148,457 snp148,684 snp148,701 snp148,842 snp148,878 snp148,1073 snp148,1099 snp148,1124 snp148,1207 snp148,1268 snp148,1352 snp148,1388 snp148,1470 snp148,1491 snp148,1503 snp148,1535 snp148,1803 snp148,1827 snp148,1917 snp148Mult,108 snp148Mult,148 snp148Mult,478 snp148Mult,705 snp148Mult,722 snp148Mult,863 snp148Mult,899 snp148Mult,1094 snp148Mult,1120 snp148Mult,1145 snp148Mult,1228 snp148Mult,1289 snp148Mult,1373 snp148Mult,1409 snp148Mult,1491 snp148Mult,1512 snp148Mult,1524 snp148Mult,1556 snp148Mult,1824 snp148Mult,1848 snp148Mult,1938 transMapEnsemblV5,63 note est,655 intronEst,736 nestedRepeats,264 transMapEnsemblV5,497 transMapEstV5,466 transMapRefSeqV5,466 transMapRnaV5,466 transMapV5,572 noted snp148,1213 snp148Mult,1234 novel transMapEnsemblV5,738 transMapEstV5,707 transMapRefSeqV5,707 transMapRnaV5,707 transMapV5,813 novo augustusGene,305 transMapEnsemblV5,773 transMapEstV5,742 transMapRefSeqV5,742 transMapRnaV5,742 transMapV5,848 nr_ snp148,445 snp148Mult,466 ns chainEquCab2,884 chainHg38,884 chainMm10,884 chainNetEquCab2,887 chainNetHg38,887 chainNetMm10,887 chainNetRn6,890 chainRn6,887 netEquCab2,884 netHg38,884 netMm10,884 netRn6,887 nuclear rmsk,155 rmsk,163 nucleic est,759 est,784 intronEst,843 intronEst,868 microsat,125 mrna,476 mrna,501 refGene,382 refGene,415 simpleRepeat,85 snp148,2272 snp148Mult,2293 xenoRefGene,347 xenoRefGene,380 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 snp148,5 snp148,19 snp148,30 snp148,197 snp148,210 snp148,249 snp148,329 snp148Mult,5 snp148Mult,29 snp148Mult,40 snp148Mult,218 snp148Mult,231 snp148Mult,270 snp148Mult,350 ucscToINSDC,6 ucscToINSDC,29 nucleotides snp148,195 snp148,256 snp148,679 snp148Mult,216 snp148Mult,277 snp148Mult,700 number augustusGene,154 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 intronEst,151 rmsk,233 snp148,677 snp148,1651 snp148,1670 snp148,1679 snp148Mult,698 snp148Mult,1672 snp148Mult,1691 snp148Mult,1700 transMapEnsemblV5,425 transMapEnsemblV5,548 transMapEstV5,394 transMapEstV5,517 transMapRefSeqV5,394 transMapRefSeqV5,517 transMapRnaV5,394 transMapRnaV5,517 transMapV5,500 transMapV5,623 o refGene,364 xenoRefGene,329 oacute geneid,25 geneid,41 sgpGene,32 sgpGene,50 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 snp148,245 snp148,252 snp148,277 snp148,292 snp148,973 snp148,999 snp148,1039 snp148,1055 snp148,1076 snp148,1097 snp148,1105 snp148,1155 snp148,1181 snp148,1227 snp148,1282 snp148,1463 snp148,1472 snp148,1497 snp148,1630 snp148,1851 snp148,1862 snp148,1879 snp148,2189 snp148Mult,266 snp148Mult,273 snp148Mult,298 snp148Mult,313 snp148Mult,994 snp148Mult,1020 snp148Mult,1060 snp148Mult,1076 snp148Mult,1097 snp148Mult,1118 snp148Mult,1126 snp148Mult,1176 snp148Mult,1202 snp148Mult,1248 snp148Mult,1303 snp148Mult,1484 snp148Mult,1493 snp148Mult,1518 snp148Mult,1651 snp148Mult,1872 snp148Mult,1883 snp148Mult,1900 snp148Mult,2210 observedcontainsiupac snp148,1051 snp148Mult,1072 observedmismatch snp148,1068 snp148Mult,1089 observedtoolong snp148,1096 snp148Mult,1117 observedwrongformat snp148,1104 snp148Mult,1125 obtain transMapEnsemblV5,650 transMapEstV5,619 transMapRefSeqV5,619 transMapRnaV5,619 transMapV5,725 obtained augustusGene,127 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 snp148,2085 snp148,2098 snp148,2129 snp148Mult,2106 snp148Mult,2119 snp148Mult,2150 transMapEnsemblV5,157 transMapEnsemblV5,610 transMapEstV5,126 transMapEstV5,579 transMapRefSeqV5,126 transMapRefSeqV5,579 transMapRnaV5,126 transMapRnaV5,579 transMapV5,232 transMapV5,685 occur simpleRepeat,36 occurring snp148,529 snp148Mult,550 oct augustusGene,335 of augustusGene,73 augustusGene,85 augustusGene,93 augustusGene,95 augustusGene,155 augustusGene,196 augustusGene,237 chainEquCab2,17 chainEquCab2,64 chainEquCab2,179 chainEquCab2,199 chainEquCab2,251 chainEquCab2,272 chainEquCab2,354 chainEquCab2,364 chainEquCab2,482 chainEquCab2,502 chainEquCab2,635 chainEquCab2,640 chainEquCab2,658 chainEquCab2,678 chainEquCab2,878 chainEquCab2,953 chainEquCab2,975 chainEquCab2,999 chainEquCab2,1013 chainHg38,17 chainHg38,64 chainHg38,179 chainHg38,199 chainHg38,251 chainHg38,272 chainHg38,354 chainHg38,364 chainHg38,482 chainHg38,502 chainHg38,635 chainHg38,640 chainHg38,658 chainHg38,678 chainHg38,878 chainHg38,953 chainHg38,975 chainHg38,999 chainHg38,1013 chainMm10,17 chainMm10,64 chainMm10,179 chainMm10,199 chainMm10,251 chainMm10,272 chainMm10,354 chainMm10,364 chainMm10,482 chainMm10,502 chainMm10,635 chainMm10,640 chainMm10,658 chainMm10,678 chainMm10,878 chainMm10,953 chainMm10,975 chainMm10,999 chainMm10,1013 chainNetEquCab2,20 chainNetEquCab2,67 chainNetEquCab2,182 chainNetEquCab2,202 chainNetEquCab2,254 chainNetEquCab2,275 chainNetEquCab2,357 chainNetEquCab2,367 chainNetEquCab2,485 chainNetEquCab2,505 chainNetEquCab2,638 chainNetEquCab2,643 chainNetEquCab2,661 chainNetEquCab2,681 chainNetEquCab2,881 chainNetEquCab2,956 chainNetEquCab2,978 chainNetEquCab2,1002 chainNetEquCab2,1016 chainNetHg38,20 chainNetHg38,67 chainNetHg38,182 chainNetHg38,202 chainNetHg38,254 chainNetHg38,275 chainNetHg38,357 chainNetHg38,367 chainNetHg38,485 chainNetHg38,505 chainNetHg38,638 chainNetHg38,643 chainNetHg38,661 chainNetHg38,681 chainNetHg38,881 chainNetHg38,956 chainNetHg38,978 chainNetHg38,1002 chainNetHg38,1016 chainNetMm10,20 chainNetMm10,67 chainNetMm10,182 chainNetMm10,202 chainNetMm10,254 chainNetMm10,275 chainNetMm10,357 chainNetMm10,367 chainNetMm10,485 chainNetMm10,505 chainNetMm10,638 chainNetMm10,643 chainNetMm10,661 chainNetMm10,681 chainNetMm10,881 chainNetMm10,956 chainNetMm10,978 chainNetMm10,1002 chainNetMm10,1016 chainNetRn6,21 chainNetRn6,68 chainNetRn6,184 chainNetRn6,204 chainNetRn6,256 chainNetRn6,277 chainNetRn6,360 chainNetRn6,370 chainNetRn6,488 chainNetRn6,508 chainNetRn6,641 chainNetRn6,646 chainNetRn6,664 chainNetRn6,684 chainNetRn6,884 chainNetRn6,959 chainNetRn6,981 chainNetRn6,1005 chainNetRn6,1019 chainRn6,18 chainRn6,65 chainRn6,181 chainRn6,201 chainRn6,253 chainRn6,274 chainRn6,357 chainRn6,367 chainRn6,485 chainRn6,505 chainRn6,638 chainRn6,643 chainRn6,661 chainRn6,681 chainRn6,881 chainRn6,956 chainRn6,978 chainRn6,1002 chainRn6,1016 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 est,41 est,71 est,80 est,98 est,100 est,135 est,174 est,200 est,211 est,247 est,316 est,426 est,503 est,519 est,537 est,554 est,616 est,624 est,628 est,707 gap,41 gap,64 gap,83 gap,89 gap,123 gap,135 gc5BaseBw,20 gc5BaseBw,47 gc5BaseBw,53 gc5BaseBw,68 gc5BaseBw,77 geneid,29 geneid,36 geneid,102 geneid,105 geneid,114 geneid,125 geneid,136 geneid,139 geneid,148 genscan,44 genscan,111 genscan,135 genscan,213 gold,43 gold,63 gold,89 gold,114 gold,144 intronEst,32 intronEst,53 intronEst,65 intronEst,97 intronEst,109 intronEst,118 intronEst,152 intronEst,161 intronEst,179 intronEst,181 intronEst,216 intronEst,255 intronEst,281 intronEst,292 intronEst,328 intronEst,397 intronEst,507 intronEst,584 intronEst,600 intronEst,618 intronEst,635 intronEst,697 intronEst,705 intronEst,709 intronEst,788 microsat,27 microsat,55 microsat,64 microsat,81 mrna,52 mrna,81 mrna,120 mrna,146 mrna,157 mrna,193 mrna,262 mrna,365 mrna,423 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netEquCab2,17 netEquCab2,64 netEquCab2,179 netEquCab2,199 netEquCab2,251 netEquCab2,272 netEquCab2,354 netEquCab2,364 netEquCab2,482 netEquCab2,502 netEquCab2,635 netEquCab2,640 netEquCab2,658 netEquCab2,678 netEquCab2,878 netEquCab2,953 netEquCab2,975 netEquCab2,999 netEquCab2,1013 netHg38,17 netHg38,64 netHg38,179 netHg38,199 netHg38,251 netHg38,272 netHg38,354 netHg38,364 netHg38,482 netHg38,502 netHg38,635 netHg38,640 netHg38,658 netHg38,678 netHg38,878 netHg38,953 netHg38,975 netHg38,999 netHg38,1013 netMm10,17 netMm10,64 netMm10,179 netMm10,199 netMm10,251 netMm10,272 netMm10,354 netMm10,364 netMm10,482 netMm10,502 netMm10,635 netMm10,640 netMm10,658 netMm10,678 netMm10,878 netMm10,953 netMm10,975 netMm10,999 netMm10,1013 netRn6,18 netRn6,65 netRn6,181 netRn6,201 netRn6,253 netRn6,274 netRn6,357 netRn6,367 netRn6,485 netRn6,505 netRn6,638 netRn6,643 netRn6,661 netRn6,681 netRn6,881 netRn6,956 netRn6,978 netRn6,1002 netRn6,1016 refGene,96 refGene,115 refGene,129 refGene,154 refGene,265 refGene,297 refGene,410 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 sgpGene,37 sgpGene,45 sgpGene,73 sgpGene,76 sgpGene,83 sgpGene,106 simpleRepeat,40 snp148,43 snp148,170 snp148,177 snp148,204 snp148,286 snp148,303 snp148,336 snp148,436 snp148,542 snp148,554 snp148,564 snp148,582 snp148,619 snp148,647 snp148,670 snp148,678 snp148,687 snp148,705 snp148,715 snp148,726 snp148,747 snp148,767 snp148,778 snp148,867 snp148,922 snp148,941 snp148,983 snp148,1011 snp148,1032 snp148,1148 snp148,1170 snp148,1194 snp148,1313 snp148,1338 snp148,1366 snp148,1376 snp148,1462 snp148,1522 snp148,1606 snp148,1652 snp148,1671 snp148,1680 snp148,1842 snp148,1850 snp148,1888 snp148,1896 snp148,2039 snp148,2269 snp148Mult,26 snp148Mult,131 snp148Mult,157 snp148Mult,191 snp148Mult,198 snp148Mult,225 snp148Mult,307 snp148Mult,324 snp148Mult,357 snp148Mult,457 snp148Mult,563 snp148Mult,575 snp148Mult,585 snp148Mult,603 snp148Mult,640 snp148Mult,668 snp148Mult,691 snp148Mult,699 snp148Mult,708 snp148Mult,726 snp148Mult,736 snp148Mult,747 snp148Mult,768 snp148Mult,788 snp148Mult,799 snp148Mult,888 snp148Mult,943 snp148Mult,962 snp148Mult,1004 snp148Mult,1032 snp148Mult,1053 snp148Mult,1169 snp148Mult,1191 snp148Mult,1215 snp148Mult,1334 snp148Mult,1359 snp148Mult,1387 snp148Mult,1397 snp148Mult,1483 snp148Mult,1543 snp148Mult,1627 snp148Mult,1673 snp148Mult,1692 snp148Mult,1701 snp148Mult,1863 snp148Mult,1871 snp148Mult,1909 snp148Mult,1917 snp148Mult,2060 snp148Mult,2290 transMapEnsemblV5,86 transMapEnsemblV5,140 transMapEnsemblV5,169 transMapEnsemblV5,208 transMapEnsemblV5,274 transMapEnsemblV5,281 transMapEnsemblV5,297 transMapEnsemblV5,309 transMapEnsemblV5,322 transMapEnsemblV5,339 transMapEnsemblV5,358 transMapEnsemblV5,376 transMapEnsemblV5,455 transMapEnsemblV5,506 transMapEnsemblV5,549 transMapEnsemblV5,737 transMapEnsemblV5,802 transMapEstV5,55 transMapEstV5,109 transMapEstV5,138 transMapEstV5,177 transMapEstV5,243 transMapEstV5,250 transMapEstV5,266 transMapEstV5,278 transMapEstV5,291 transMapEstV5,308 transMapEstV5,327 transMapEstV5,345 transMapEstV5,424 transMapEstV5,475 transMapEstV5,518 transMapEstV5,706 transMapEstV5,771 transMapRefSeqV5,55 transMapRefSeqV5,109 transMapRefSeqV5,138 transMapRefSeqV5,177 transMapRefSeqV5,243 transMapRefSeqV5,250 transMapRefSeqV5,266 transMapRefSeqV5,278 transMapRefSeqV5,291 transMapRefSeqV5,308 transMapRefSeqV5,327 transMapRefSeqV5,345 transMapRefSeqV5,424 transMapRefSeqV5,475 transMapRefSeqV5,518 transMapRefSeqV5,706 transMapRefSeqV5,771 transMapRnaV5,55 transMapRnaV5,109 transMapRnaV5,138 transMapRnaV5,177 transMapRnaV5,243 transMapRnaV5,250 transMapRnaV5,266 transMapRnaV5,278 transMapRnaV5,291 transMapRnaV5,308 transMapRnaV5,327 transMapRnaV5,345 transMapRnaV5,424 transMapRnaV5,475 transMapRnaV5,518 transMapRnaV5,706 transMapRnaV5,771 transMapV5,56 transMapV5,215 transMapV5,244 transMapV5,283 transMapV5,349 transMapV5,356 transMapV5,372 transMapV5,384 transMapV5,397 transMapV5,414 transMapV5,433 transMapV5,451 transMapV5,530 transMapV5,581 transMapV5,624 transMapV5,812 transMapV5,877 xenoRefGene,62 xenoRefGene,81 xenoRefGene,95 xenoRefGene,120 xenoRefGene,231 xenoRefGene,263 xenoRefGene,375 off chainEquCab2,333 chainEquCab2,339 chainHg38,333 chainHg38,339 chainMm10,333 chainMm10,339 chainNetEquCab2,336 chainNetEquCab2,342 chainNetHg38,336 chainNetHg38,342 chainNetMm10,336 chainNetMm10,342 chainNetRn6,339 chainNetRn6,345 chainRn6,336 chainRn6,342 netEquCab2,333 netEquCab2,339 netHg38,333 netHg38,339 netMm10,333 netMm10,339 netRn6,336 netRn6,342 refGene,167 xenoRefGene,133 offers genscan,80 often chainEquCab2,209 chainEquCab2,221 chainHg38,209 chainHg38,221 chainMm10,209 chainMm10,221 chainNetEquCab2,212 chainNetEquCab2,224 chainNetHg38,212 chainNetHg38,224 chainNetMm10,212 chainNetMm10,224 chainNetRn6,214 chainNetRn6,226 chainRn6,211 chainRn6,223 netEquCab2,209 netEquCab2,221 netHg38,209 netHg38,221 netMm10,209 netMm10,221 netRn6,211 netRn6,223 snp148,1957 snp148Mult,1978 ograve geneid,43 sgpGene,52 oligo-dt est,496 intronEst,577 omia snp148,1289 snp148,1327 snp148,1358 snp148Mult,1310 snp148Mult,1348 snp148Mult,1379 omim snp148,1255 snp148,1288 snp148,1326 snp148,1357 snp148Mult,1276 snp148Mult,1309 snp148Mult,1347 snp148Mult,1378 omitted nestedRepeats,165 snp148,98 on augustusGene,30 augustusGene,38 augustusGene,152 chainEquCab2,321 chainEquCab2,347 chainEquCab2,450 chainEquCab2,464 chainEquCab2,514 chainEquCab2,519 chainEquCab2,534 chainEquCab2,765 chainHg38,321 chainHg38,347 chainHg38,450 chainHg38,464 chainHg38,514 chainHg38,519 chainHg38,534 chainHg38,765 chainMm10,321 chainMm10,347 chainMm10,450 chainMm10,464 chainMm10,514 chainMm10,519 chainMm10,534 chainMm10,765 chainNetEquCab2,324 chainNetEquCab2,350 chainNetEquCab2,453 chainNetEquCab2,467 chainNetEquCab2,517 chainNetEquCab2,522 chainNetEquCab2,537 chainNetEquCab2,768 chainNetHg38,324 chainNetHg38,350 chainNetHg38,453 chainNetHg38,467 chainNetHg38,517 chainNetHg38,522 chainNetHg38,537 chainNetHg38,768 chainNetMm10,324 chainNetMm10,350 chainNetMm10,453 chainNetMm10,467 chainNetMm10,517 chainNetMm10,522 chainNetMm10,537 chainNetMm10,768 chainNetRn6,327 chainNetRn6,353 chainNetRn6,456 chainNetRn6,470 chainNetRn6,520 chainNetRn6,525 chainNetRn6,540 chainNetRn6,771 chainRn6,324 chainRn6,350 chainRn6,453 chainRn6,467 chainRn6,517 chainRn6,522 chainRn6,537 chainRn6,768 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 est,230 est,279 gap,86 genscan,28 genscan,53 intronEst,311 intronEst,360 mrna,176 mrna,225 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netEquCab2,321 netEquCab2,347 netEquCab2,450 netEquCab2,464 netEquCab2,514 netEquCab2,519 netEquCab2,534 netEquCab2,765 netHg38,321 netHg38,347 netHg38,450 netHg38,464 netHg38,514 netHg38,519 netHg38,534 netHg38,765 netMm10,321 netMm10,347 netMm10,450 netMm10,464 netMm10,514 netMm10,519 netMm10,534 netMm10,765 netRn6,324 netRn6,350 netRn6,453 netRn6,467 netRn6,517 netRn6,522 netRn6,537 netRn6,768 refGene,67 refGene,378 rmsk,74 snp148,223 snp148,438 snp148,488 snp148,1034 snp148,1577 snp148,1587 snp148,1731 snp148,1740 snp148,1923 snp148,1942 snp148Mult,244 snp148Mult,459 snp148Mult,509 snp148Mult,1055 snp148Mult,1598 snp148Mult,1608 snp148Mult,1752 snp148Mult,1761 snp148Mult,1944 snp148Mult,1963 transMapEnsemblV5,568 transMapEnsemblV5,805 transMapEstV5,537 transMapEstV5,774 transMapRefSeqV5,537 transMapRefSeqV5,774 transMapRnaV5,537 transMapRnaV5,774 transMapV5,103 transMapV5,643 transMapV5,880 xenoRefGene,343 once est,264 intronEst,345 mrna,210 one augustusGene,170 chainEquCab2,187 chainEquCab2,355 chainEquCab2,501 chainEquCab2,792 chainEquCab2,888 chainHg38,187 chainHg38,355 chainHg38,501 chainHg38,792 chainHg38,888 chainMm10,187 chainMm10,355 chainMm10,501 chainMm10,792 chainMm10,888 chainNetEquCab2,190 chainNetEquCab2,358 chainNetEquCab2,504 chainNetEquCab2,795 chainNetEquCab2,891 chainNetHg38,190 chainNetHg38,358 chainNetHg38,504 chainNetHg38,795 chainNetHg38,891 chainNetMm10,190 chainNetMm10,358 chainNetMm10,504 chainNetMm10,795 chainNetMm10,891 chainNetRn6,192 chainNetRn6,361 chainNetRn6,507 chainNetRn6,798 chainNetRn6,894 chainRn6,189 chainRn6,358 chainRn6,504 chainRn6,795 chainRn6,891 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 est,171 est,282 est,315 gold,156 intronEst,68 intronEst,252 intronEst,363 intronEst,396 mrna,117 mrna,228 mrna,261 netEquCab2,187 netEquCab2,355 netEquCab2,501 netEquCab2,792 netEquCab2,888 netHg38,187 netHg38,355 netHg38,501 netHg38,792 netHg38,888 netMm10,187 netMm10,355 netMm10,501 netMm10,792 netMm10,888 netRn6,189 netRn6,358 netRn6,504 netRn6,795 netRn6,891 snp148,388 snp148,394 snp148,414 snp148,469 snp148,580 snp148,617 snp148,645 snp148,929 snp148,960 snp148,1023 snp148,1054 snp148,1260 snp148,1337 snp148,1365 snp148,1410 snp148,1477 snp148,1751 snp148Mult,409 snp148Mult,415 snp148Mult,435 snp148Mult,490 snp148Mult,601 snp148Mult,638 snp148Mult,666 snp148Mult,950 snp148Mult,981 snp148Mult,1044 snp148Mult,1075 snp148Mult,1281 snp148Mult,1358 snp148Mult,1386 snp148Mult,1431 snp148Mult,1498 snp148Mult,1772 transMapV5,78 ones transMapEnsemblV5,51 online snp148,1294 snp148,1303 snp148Mult,1315 snp148Mult,1324 only chainEquCab2,351 chainHg38,351 chainMm10,351 chainNetEquCab2,354 chainNetHg38,354 chainNetMm10,354 chainNetRn6,357 chainRn6,354 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 est,155 est,295 est,368 est,401 est,698 intronEst,236 intronEst,376 intronEst,449 intronEst,482 intronEst,779 microsat,61 mrna,101 mrna,241 mrna,314 mrna,414 netEquCab2,351 netHg38,351 netMm10,351 netRn6,354 refGene,243 refGene,288 snp148,1083 snp148,1231 snp148,1251 snp148,1277 snp148,1638 snp148Mult,51 snp148Mult,1104 snp148Mult,1252 snp148Mult,1272 snp148Mult,1298 snp148Mult,1659 transMapEnsemblV5,50 transMapEnsemblV5,651 transMapEstV5,620 transMapRefSeqV5,620 transMapRnaV5,620 transMapV5,726 xenoRefGene,209 xenoRefGene,254 ontology snp148,485 snp148,498 snp148,2122 snp148Mult,506 snp148Mult,519 snp148Mult,2143 oommen transMapEnsemblV5,729 transMapEstV5,698 transMapRefSeqV5,698 transMapRnaV5,698 transMapV5,804 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 opposite chainEquCab2,546 chainHg38,546 chainMm10,546 chainNetEquCab2,549 chainNetHg38,549 chainNetMm10,549 chainNetRn6,552 chainRn6,549 netEquCab2,546 netHg38,546 netMm10,546 netRn6,549 option augustusGene,168 augustusGene,188 est,414 genscan,95 intronEst,495 mrna,351 refGene,147 refGene,199 transMapEnsemblV5,135 transMapEstV5,104 transMapRefSeqV5,104 transMapRnaV5,104 transMapV5,210 xenoRefGene,113 xenoRefGene,165 optional refGene,177 xenoRefGene,143 options est,443 gc5BaseBw,71 genscan,86 intronEst,524 mrna,382 snp148,776 snp148,1506 snp148,1512 snp148Mult,797 snp148Mult,1527 snp148Mult,1533 or chainEquCab2,30 chainEquCab2,127 chainEquCab2,150 chainEquCab2,182 chainEquCab2,485 chainEquCab2,860 chainEquCab2,889 chainHg38,30 chainHg38,127 chainHg38,150 chainHg38,182 chainHg38,485 chainHg38,860 chainHg38,889 chainMm10,30 chainMm10,127 chainMm10,150 chainMm10,182 chainMm10,485 chainMm10,860 chainMm10,889 chainNetEquCab2,33 chainNetEquCab2,130 chainNetEquCab2,153 chainNetEquCab2,185 chainNetEquCab2,488 chainNetEquCab2,863 chainNetEquCab2,892 chainNetHg38,33 chainNetHg38,130 chainNetHg38,153 chainNetHg38,185 chainNetHg38,488 chainNetHg38,863 chainNetHg38,892 chainNetMm10,33 chainNetMm10,130 chainNetMm10,153 chainNetMm10,185 chainNetMm10,488 chainNetMm10,863 chainNetMm10,892 chainNetRn6,34 chainNetRn6,132 chainNetRn6,155 chainNetRn6,187 chainNetRn6,491 chainNetRn6,866 chainNetRn6,895 chainRn6,31 chainRn6,129 chainRn6,152 chainRn6,184 chainRn6,488 chainRn6,863 chainRn6,892 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 est,172 est,307 est,326 est,335 est,400 est,478 est,510 est,524 intronEst,253 intronEst,388 intronEst,407 intronEst,416 intronEst,481 intronEst,559 intronEst,591 intronEst,605 mrna,118 mrna,253 mrna,272 mrna,281 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netEquCab2,30 netEquCab2,127 netEquCab2,150 netEquCab2,182 netEquCab2,485 netEquCab2,860 netEquCab2,889 netHg38,30 netHg38,127 netHg38,150 netHg38,182 netHg38,485 netHg38,860 netHg38,889 netMm10,30 netMm10,127 netMm10,150 netMm10,182 netMm10,485 netMm10,860 netMm10,889 netRn6,31 netRn6,129 netRn6,152 netRn6,184 netRn6,488 netRn6,863 netRn6,892 refGene,57 refGene,165 rmsk,251 rmsk,280 snp148,127 snp148,163 snp148,220 snp148,233 snp148,261 snp148,681 snp148,911 snp148,931 snp148,1094 snp148,1221 snp148,1257 snp148,1302 snp148,1356 snp148,1386 snp148,1555 snp148,1608 snp148,1752 snp148,1769 snp148,1815 snp148,1998 snp148,2206 snp148,2225 snp148,2242 snp148Mult,96 snp148Mult,184 snp148Mult,241 snp148Mult,254 snp148Mult,282 snp148Mult,702 snp148Mult,932 snp148Mult,952 snp148Mult,1115 snp148Mult,1242 snp148Mult,1278 snp148Mult,1323 snp148Mult,1377 snp148Mult,1407 snp148Mult,1576 snp148Mult,1629 snp148Mult,1773 snp148Mult,1790 snp148Mult,1836 snp148Mult,2019 snp148Mult,2227 snp148Mult,2246 snp148Mult,2263 transMapEnsemblV5,20 transMapEnsemblV5,532 transMapEnsemblV5,560 transMapEnsemblV5,603 transMapEnsemblV5,623 transMapEstV5,501 transMapEstV5,529 transMapEstV5,572 transMapEstV5,592 transMapRefSeqV5,501 transMapRefSeqV5,529 transMapRefSeqV5,572 transMapRefSeqV5,592 transMapRnaV5,501 transMapRnaV5,529 transMapRnaV5,572 transMapRnaV5,592 transMapV5,48 transMapV5,607 transMapV5,635 transMapV5,678 transMapV5,698 xenoRefGene,131 order gap,80 gold,111 organ est,196 est,202 intronEst,277 intronEst,283 mrna,142 mrna,148 organism chainEquCab2,330 chainEquCab2,360 chainHg38,330 chainHg38,360 chainMm10,330 chainMm10,360 chainNetEquCab2,333 chainNetEquCab2,363 chainNetHg38,333 chainNetHg38,363 chainNetMm10,333 chainNetMm10,363 chainNetRn6,336 chainNetRn6,366 chainRn6,333 chainRn6,363 netEquCab2,330 netEquCab2,360 netHg38,330 netHg38,360 netMm10,330 netMm10,360 netRn6,333 netRn6,363 organism_data snp148,2058 snp148Mult,2079 organisms chainEquCab2,905 chainHg38,905 chainMm10,905 chainNetEquCab2,908 chainNetHg38,908 chainNetMm10,908 chainNetRn6,911 chainRn6,908 nestedRepeats,295 netEquCab2,905 netHg38,905 netMm10,905 netRn6,908 rmsk,302 snp148,2055 snp148,2070 snp148Mult,2076 snp148Mult,2091 transMapEnsemblV5,160 transMapEnsemblV5,217 transMapEstV5,129 transMapEstV5,186 transMapRefSeqV5,129 transMapRefSeqV5,186 transMapRnaV5,129 transMapRnaV5,186 transMapV5,65 transMapV5,153 transMapV5,235 transMapV5,292 xenoRefGene,21 organizes chainEquCab2,614 chainHg38,614 chainMm10,614 chainNetEquCab2,617 chainNetHg38,617 chainNetMm10,617 chainNetRn6,620 chainRn6,617 netEquCab2,614 netHg38,614 netMm10,614 netRn6,617 orientation chainEquCab2,547 chainHg38,547 chainMm10,547 chainNetEquCab2,550 chainNetHg38,550 chainNetMm10,550 chainNetRn6,553 chainRn6,550 cytoBandIdeo,6 gap,82 gold,113 netEquCab2,547 netHg38,547 netMm10,547 netRn6,550 snp148,2076 snp148Mult,2097 origin nestedRepeats,398 rmsk,421 original nestedRepeats,84 orthologous transMapEnsemblV5,88 transMapEstV5,57 transMapRefSeqV5,57 transMapRnaV5,57 transMapV5,58 orthologs chainEquCab2,284 chainHg38,284 chainMm10,284 chainNetEquCab2,287 chainNetHg38,287 chainNetMm10,287 chainNetRn6,289 chainRn6,286 netEquCab2,284 netHg38,284 netMm10,284 netRn6,286 transMapV5,95 ostell est,754 est,778 intronEst,838 intronEst,862 mrna,471 mrna,495 other augustusGene,209 chainEquCab2,24 chainEquCab2,412 chainEquCab2,505 chainHg38,24 chainHg38,412 chainHg38,505 chainMm10,24 chainMm10,412 chainMm10,505 chainNetEquCab2,27 chainNetEquCab2,415 chainNetEquCab2,508 chainNetHg38,27 chainNetHg38,415 chainNetHg38,508 chainNetMm10,27 chainNetMm10,415 chainNetMm10,508 chainNetRn6,28 chainNetRn6,418 chainNetRn6,511 chainRn6,25 chainRn6,415 chainRn6,508 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 nestedRepeats,376 netEquCab2,24 netEquCab2,412 netEquCab2,505 netHg38,24 netHg38,412 netHg38,505 netMm10,24 netMm10,412 netMm10,505 netRn6,25 netRn6,415 netRn6,508 rmsk,195 rmsk,399 sgpGene,84 snp148,1500 snp148,1861 snp148,1878 snp148Mult,121 snp148Mult,1521 snp148Mult,1882 snp148Mult,1899 transMapEnsemblV5,31 transMapEnsemblV5,47 transMapEnsemblV5,369 transMapEstV5,29 transMapEstV5,338 transMapRefSeqV5,29 transMapRefSeqV5,338 transMapRnaV5,29 transMapRnaV5,338 transMapV5,28 transMapV5,444 xenoRefGene,1 xenoRefGene,22 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 snp148,1319 snp148Mult,1340 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 est,679 intronEst,760 transMapEnsemblV5,247 transMapEstV5,216 transMapRefSeqV5,216 transMapRnaV5,216 transMapV5,322 ouml augustusGene,270 our augustusGene,44 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 genscan,59 refGene,73 rmsk,124 rmsk,129 snp148,2233 snp148,2243 snp148Mult,2254 snp148Mult,2264 transMapEnsemblV5,557 transMapEnsemblV5,563 transMapEnsemblV5,573 transMapEnsemblV5,612 transMapEstV5,526 transMapEstV5,532 transMapEstV5,542 transMapEstV5,581 transMapRefSeqV5,526 transMapRefSeqV5,532 transMapRefSeqV5,542 transMapRefSeqV5,581 transMapRnaV5,526 transMapRnaV5,532 transMapRnaV5,542 transMapRnaV5,581 transMapV5,632 transMapV5,638 transMapV5,648 transMapV5,687 out chainEquCab2,634 chainHg38,634 chainMm10,634 chainNetEquCab2,637 chainNetHg38,637 chainNetMm10,637 chainNetRn6,640 chainRn6,637 netEquCab2,634 netHg38,634 netMm10,634 netRn6,637 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 windowmaskerSdust,63 windowmaskerSdust,72 outputs rmsk,35 outside est,615 intronEst,696 over chainEquCab2,195 chainEquCab2,649 chainHg38,195 chainHg38,649 chainMm10,195 chainMm10,649 chainNetEquCab2,198 chainNetEquCab2,652 chainNetHg38,198 chainNetHg38,652 chainNetMm10,198 chainNetMm10,652 chainNetRn6,200 chainNetRn6,655 chainRn6,197 chainRn6,652 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 netEquCab2,195 netEquCab2,649 netHg38,195 netHg38,649 netMm10,195 netMm10,649 netRn6,197 netRn6,652 overlapping chainEquCab2,112 chainEquCab2,175 chainHg38,112 chainHg38,175 chainMm10,112 chainMm10,175 chainNetEquCab2,115 chainNetEquCab2,178 chainNetHg38,115 chainNetHg38,178 chainNetMm10,115 chainNetMm10,178 chainNetRn6,117 chainNetRn6,180 chainRn6,114 chainRn6,177 netEquCab2,112 netEquCab2,175 netHg38,112 netHg38,175 netMm10,112 netMm10,175 netRn6,114 netRn6,177 overlaps snp148,474 snp148Mult,495 p genscan,206 nestedRepeats,329 rmsk,352 pac chainEquCab2,1033 chainHg38,1033 chainMm10,1033 chainNetEquCab2,1036 chainNetHg38,1036 chainNetMm10,1036 chainNetRn6,1039 chainRn6,1036 netEquCab2,1033 netHg38,1033 netMm10,1033 netRn6,1036 pack chainEquCab2,231 chainHg38,231 chainMm10,231 chainNetEquCab2,234 chainNetHg38,234 chainNetMm10,234 chainNetRn6,236 chainRn6,233 nestedRepeats,116 netEquCab2,231 netHg38,231 netMm10,231 netRn6,233 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 est,111 est,423 est,444 genscan,79 genscan,124 intronEst,192 intronEst,504 intronEst,525 mrna,57 mrna,362 mrna,383 refGene,49 refGene,133 refGene,224 rmsk,77 snp148,227 snp148,782 snp148,871 snp148,1712 snp148,1735 snp148,1742 snp148,1761 snp148Mult,248 snp148Mult,803 snp148Mult,892 snp148Mult,1733 snp148Mult,1756 snp148Mult,1763 snp148Mult,1782 xenoRefGene,99 xenoRefGene,190 pages chainEquCab2,770 chainHg38,770 chainMm10,770 chainNetEquCab2,773 chainNetHg38,773 chainNetMm10,773 chainNetRn6,776 chainRn6,773 netEquCab2,770 netHg38,770 netMm10,770 netRn6,773 snp148,1945 snp148,2116 snp148Mult,1966 snp148Mult,2137 pair gap,96 pairwise chainEquCab2,1011 chainEquCab2,1029 chainHg38,1011 chainHg38,1029 chainMm10,1011 chainMm10,1029 chainNetEquCab2,1014 chainNetEquCab2,1032 chainNetHg38,1014 chainNetHg38,1032 chainNetMm10,1014 chainNetMm10,1032 chainNetRn6,1017 chainNetRn6,1035 chainRn6,1014 chainRn6,1032 netEquCab2,1011 netEquCab2,1029 netHg38,1011 netHg38,1029 netMm10,1011 netMm10,1029 netRn6,1014 netRn6,1032 transMapEnsemblV5,337 transMapEstV5,306 transMapRefSeqV5,306 transMapRnaV5,306 transMapV5,84 transMapV5,412 paralogous transMapEnsemblV5,301 transMapEstV5,270 transMapRefSeqV5,270 transMapRnaV5,270 transMapV5,376 paralogs chainEquCab2,224 chainHg38,224 chainMm10,224 chainNetEquCab2,227 chainNetHg38,227 chainNetMm10,227 chainNetRn6,229 chainRn6,226 netEquCab2,224 netHg38,224 netMm10,224 netRn6,226 transMapV5,161 parameters windowmaskerSdust,57 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 parentheses gold,148 parra geneid,158 geneid,179 part chainEquCab2,271 chainHg38,271 chainMm10,271 chainNetEquCab2,274 chainNetHg38,274 chainNetMm10,274 chainNetRn6,276 chainRn6,273 geneid,35 netEquCab2,271 netHg38,271 netMm10,271 netRn6,273 sgpGene,44 particular augustusGene,235 chainEquCab2,197 chainHg38,197 chainMm10,197 chainNetEquCab2,200 chainNetHg38,200 chainNetMm10,200 chainNetRn6,202 chainRn6,199 netEquCab2,197 netHg38,197 netMm10,197 netRn6,199 snp148,1381 snp148,1721 snp148Mult,1402 snp148Mult,1742 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts chainEquCab2,39 chainEquCab2,50 chainHg38,39 chainHg38,50 chainMm10,39 chainMm10,50 chainNetEquCab2,42 chainNetEquCab2,53 chainNetHg38,42 chainNetHg38,53 chainNetMm10,42 chainNetMm10,53 chainNetRn6,43 chainNetRn6,54 chainRn6,40 chainRn6,51 netEquCab2,39 netEquCab2,50 netHg38,39 netHg38,50 netMm10,39 netMm10,50 netRn6,40 netRn6,51 patterns augustusGene,57 pennsylvania chainEquCab2,916 chainEquCab2,1019 chainHg38,916 chainHg38,1019 chainMm10,916 chainMm10,1019 chainNetEquCab2,919 chainNetEquCab2,1022 chainNetHg38,919 chainNetHg38,1022 chainNetMm10,919 chainNetMm10,1022 chainNetRn6,922 chainNetRn6,1025 chainRn6,919 chainRn6,1022 netEquCab2,916 netEquCab2,1019 netHg38,916 netHg38,1019 netMm10,916 netMm10,1019 netRn6,919 netRn6,1022 percent gc5BaseBw,2 gc5BaseBw,4 gc5BaseBw,15 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5BaseBw,19 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 est,606 intronEst,687 period microsat,65 snp148,2004 snp148Mult,2025 permitted rmsk,314 ph.d chainEquCab2,1016 chainHg38,1016 chainMm10,1016 chainNetEquCab2,1019 chainNetHg38,1019 chainNetMm10,1019 chainNetRn6,1022 chainRn6,1019 netEquCab2,1016 netHg38,1016 netMm10,1016 netRn6,1019 phan snp148,2259 snp148Mult,2280 phylofit transMapEnsemblV5,229 transMapEstV5,198 transMapRefSeqV5,198 transMapRnaV5,198 transMapV5,304 place chainEquCab2,789 chainHg38,789 chainMm10,789 chainNetEquCab2,792 chainNetHg38,792 chainNetMm10,792 chainNetRn6,795 chainRn6,792 netEquCab2,789 netHg38,789 netMm10,789 netRn6,792 placed chainEquCab2,831 chainHg38,831 chainMm10,831 chainNetEquCab2,834 chainNetHg38,834 chainNetMm10,834 chainNetRn6,837 chainRn6,834 netEquCab2,831 netHg38,831 netMm10,831 netRn6,834 places est,688 intronEst,769 mrna,404 refGene,278 xenoRefGene,244 plasmid est,467 intronEst,548 please refGene,39 snp148,2230 snp148Mult,2251 plos transMapEnsemblV5,809 transMapEstV5,778 transMapRefSeqV5,778 transMapRnaV5,778 transMapV5,884 plus geneid,109 pmc chainEquCab2,1078 chainEquCab2,1109 chainHg38,1078 chainHg38,1109 chainMm10,1078 chainMm10,1109 chainNetEquCab2,1081 chainNetEquCab2,1112 chainNetHg38,1081 chainNetHg38,1112 chainNetMm10,1081 chainNetMm10,1112 chainNetRn6,1084 chainNetRn6,1115 chainRn6,1081 chainRn6,1112 est,770 est,796 est,814 geneid,198 intronEst,854 intronEst,880 intronEst,898 microsat,136 mrna,487 mrna,513 mrna,531 netEquCab2,1078 netEquCab2,1109 netHg38,1078 netHg38,1109 netMm10,1078 netMm10,1109 netRn6,1081 netRn6,1112 refGene,351 refGene,393 refGene,427 simpleRepeat,96 snp148,2283 snp148Mult,2304 transMapEnsemblV5,753 transMapEnsemblV5,819 transMapEstV5,722 transMapEstV5,788 transMapRefSeqV5,722 transMapRefSeqV5,788 transMapRnaV5,722 transMapRnaV5,788 transMapV5,828 transMapV5,894 xenoRefGene,316 xenoRefGene,358 xenoRefGene,392 pmc148217 microsat,137 simpleRepeat,97 pmc187518 est,815 intronEst,899 mrna,532 refGene,352 xenoRefGene,317 pmc208784 chainEquCab2,1079 chainHg38,1079 chainMm10,1079 chainNetEquCab2,1082 chainNetHg38,1082 chainNetMm10,1082 chainNetRn6,1085 chainRn6,1082 netEquCab2,1079 netHg38,1079 netMm10,1079 netRn6,1082 pmc2099585 transMapEnsemblV5,754 transMapEstV5,723 transMapRefSeqV5,723 transMapRnaV5,723 transMapV5,829 pmc2134963 transMapEnsemblV5,820 transMapEstV5,789 transMapRefSeqV5,789 transMapRnaV5,789 transMapV5,895 pmc29783 snp148,2284 snp148Mult,2305 pmc308779 est,797 intronEst,881 mrna,514 pmc310871 geneid,199 pmc3531190 est,771 intronEst,855 mrna,488 pmc3965018 refGene,394 xenoRefGene,359 pmc430961 chainEquCab2,1110 chainHg38,1110 chainMm10,1110 chainNetEquCab2,1113 chainNetHg38,1113 chainNetMm10,1113 chainNetRn6,1116 chainRn6,1113 netEquCab2,1110 netHg38,1110 netMm10,1110 netRn6,1113 pmc539979 refGene,428 xenoRefGene,393 pmid augustusGene,315 augustusGene,340 chainEquCab2,1038 chainEquCab2,1076 chainEquCab2,1107 chainHg38,1038 chainHg38,1076 chainHg38,1107 chainMm10,1038 chainMm10,1076 chainMm10,1107 chainNetEquCab2,1041 chainNetEquCab2,1079 chainNetEquCab2,1110 chainNetHg38,1041 chainNetHg38,1079 chainNetHg38,1110 chainNetMm10,1041 chainNetMm10,1079 chainNetMm10,1110 chainNetRn6,1044 chainNetRn6,1082 chainNetRn6,1113 chainRn6,1041 chainRn6,1079 chainRn6,1110 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 est,768 est,794 est,812 geneid,177 geneid,196 genscan,230 intronEst,852 intronEst,878 intronEst,896 microsat,134 mrna,485 mrna,511 mrna,529 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netEquCab2,1038 netEquCab2,1076 netEquCab2,1107 netHg38,1038 netHg38,1076 netHg38,1107 netMm10,1038 netMm10,1076 netMm10,1107 netRn6,1041 netRn6,1079 netRn6,1110 refGene,349 refGene,391 refGene,425 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 snp148,2281 snp148Mult,2302 transMapEnsemblV5,751 transMapEnsemblV5,783 transMapEnsemblV5,817 transMapEstV5,720 transMapEstV5,752 transMapEstV5,786 transMapRefSeqV5,720 transMapRefSeqV5,752 transMapRefSeqV5,786 transMapRnaV5,720 transMapRnaV5,752 transMapRnaV5,786 transMapV5,826 transMapV5,858 transMapV5,892 windowmaskerSdust,113 xenoRefGene,314 xenoRefGene,356 xenoRefGene,390 point est,549 intronEst,630 rmsk,269 poly-a augustusGene,63 est,501 est,575 intronEst,582 intronEst,656 polymorphic microsat,41 simpleRepeat,46 polymorphism snp148,330 snp148,346 snp148,357 snp148,2190 snp148Mult,351 snp148Mult,367 snp148Mult,378 snp148Mult,2211 polymorphisms snp148,6 snp148,20 snp148,31 snp148,198 snp148Mult,6 snp148Mult,30 snp148Mult,41 snp148Mult,219 population microsat,44 snp148,1399 snp148,1411 snp148Mult,1420 snp148Mult,1432 populations snp148,1418 snp148,1428 snp148Mult,1439 snp148Mult,1449 position chainEquCab2,705 chainHg38,705 chainMm10,705 chainNetEquCab2,708 chainNetHg38,708 chainNetMm10,708 chainNetRn6,711 chainRn6,708 geneid,85 netEquCab2,705 netHg38,705 netMm10,705 netRn6,708 snp148,937 snp148,1136 snp148,1488 snp148Mult,958 snp148Mult,1157 snp148Mult,1509 possible chainEquCab2,406 chainHg38,406 chainMm10,406 chainNetEquCab2,409 chainNetHg38,409 chainNetMm10,409 chainNetRn6,412 chainRn6,409 netEquCab2,406 netHg38,406 netMm10,406 netRn6,409 possibly chainEquCab2,283 chainHg38,283 chainMm10,283 chainNetEquCab2,286 chainNetHg38,286 chainNetMm10,286 chainNetRn6,288 chainRn6,285 netEquCab2,283 netHg38,283 netMm10,283 netRn6,285 simpleRepeat,18 snp148,505 snp148Mult,526 post-alignment transMapEnsemblV5,304 transMapEstV5,273 transMapRefSeqV5,273 transMapRnaV5,273 transMapV5,379 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 pre-mrna genscan,186 precompiled transMapEnsemblV5,627 transMapEstV5,596 transMapRefSeqV5,596 transMapRnaV5,596 transMapV5,702 predict geneid,56 sgpGene,60 predicted cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 geneid,78 geneid,126 refGene,103 snp148,433 snp148,453 snp148,1801 snp148Mult,454 snp148Mult,474 snp148Mult,1822 xenoRefGene,69 prediction augustusGene,11 augustusGene,322 geneid,9 genscan,9 genscan,74 genscan,212 refGene,8 refGene,88 sgpGene,13 sgpGene,26 transMapEnsemblV5,13 transMapEnsemblV5,85 transMapEstV5,11 transMapEstV5,54 transMapRefSeqV5,12 transMapRefSeqV5,54 transMapRnaV5,12 transMapRnaV5,54 transMapV5,10 transMapV5,55 xenoRefGene,9 xenoRefGene,54 predictions augustusGene,6 augustusGene,19 augustusGene,27 augustusGene,192 geneid,5 geneid,16 genscan,5 genscan,15 genscan,25 genscan,113 genscan,119 refGene,190 refGene,219 sgpGene,5 sgpGene,20 sgpGene,69 xenoRefGene,156 xenoRefGene,185 premature snp148,590 snp148Mult,611 prepared gc5BaseBw,81 ucscToINSDC,50 ucscToRefSeq,44 present cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 snp148,1492 snp148Mult,1513 presentation gc5BaseBw,76 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previously chainEquCab2,909 chainHg38,909 chainMm10,909 chainNetEquCab2,912 chainNetHg38,912 chainNetMm10,912 chainNetRn6,915 chainRn6,912 netEquCab2,909 netHg38,909 netMm10,909 netRn6,912 primed est,493 intronEst,574 primer est,480 intronEst,561 priming est,576 intronEst,657 principal gap,121 pringle transMapEnsemblV5,793 transMapEstV5,762 transMapRefSeqV5,762 transMapRnaV5,762 transMapV5,868 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 probably snp148,890 snp148,1049 snp148Mult,911 snp148Mult,1070 problem snp148,856 snp148,1211 snp148Mult,877 snp148Mult,1232 proc chainEquCab2,1063 chainHg38,1063 chainMm10,1063 chainNetEquCab2,1066 chainNetHg38,1066 chainNetMm10,1066 chainNetRn6,1069 chainRn6,1066 netEquCab2,1063 netHg38,1063 netMm10,1063 netRn6,1066 procedures gap,23 gold,25 process chainEquCab2,813 chainHg38,813 chainMm10,813 chainNetEquCab2,816 chainNetHg38,816 chainNetMm10,816 chainNetRn6,819 chainRn6,816 netEquCab2,813 netHg38,813 netMm10,813 netRn6,816 processed chainEquCab2,212 chainHg38,212 chainMm10,212 chainNetEquCab2,215 chainNetHg38,215 chainNetMm10,215 chainNetRn6,217 chainRn6,214 netEquCab2,212 netHg38,212 netMm10,212 netRn6,214 processing geneid,31 geneid,150 sgpGene,39 sgpGene,108 produced est,726 intronEst,810 mrna,443 refGene,316 transMapEnsemblV5,23 transMapEnsemblV5,678 transMapEnsemblV5,702 transMapEstV5,21 transMapEstV5,647 transMapEstV5,671 transMapRefSeqV5,21 transMapRefSeqV5,647 transMapRefSeqV5,671 transMapRnaV5,21 transMapRnaV5,647 transMapRnaV5,671 transMapV5,20 transMapV5,142 transMapV5,753 transMapV5,777 xenoRefGene,282 program augustusGene,22 augustusGene,258 chainEquCab2,605 chainEquCab2,645 chainEquCab2,783 chainEquCab2,836 chainEquCab2,868 chainEquCab2,944 chainEquCab2,947 chainHg38,605 chainHg38,645 chainHg38,783 chainHg38,836 chainHg38,868 chainHg38,944 chainHg38,947 chainMm10,605 chainMm10,645 chainMm10,783 chainMm10,836 chainMm10,868 chainMm10,944 chainMm10,947 chainNetEquCab2,608 chainNetEquCab2,648 chainNetEquCab2,786 chainNetEquCab2,839 chainNetEquCab2,871 chainNetEquCab2,947 chainNetEquCab2,950 chainNetHg38,608 chainNetHg38,648 chainNetHg38,786 chainNetHg38,839 chainNetHg38,871 chainNetHg38,947 chainNetHg38,950 chainNetMm10,608 chainNetMm10,648 chainNetMm10,786 chainNetMm10,839 chainNetMm10,871 chainNetMm10,947 chainNetMm10,950 chainNetRn6,611 chainNetRn6,651 chainNetRn6,789 chainNetRn6,842 chainNetRn6,874 chainNetRn6,950 chainNetRn6,953 chainRn6,608 chainRn6,648 chainRn6,786 chainRn6,839 chainRn6,871 chainRn6,947 chainRn6,950 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 geneid,20 geneid,54 genscan,19 genscan,138 genscan,179 microsat,100 microsat,120 mrna,396 nestedRepeats,30 netEquCab2,605 netEquCab2,645 netEquCab2,783 netEquCab2,836 netEquCab2,868 netEquCab2,944 netEquCab2,947 netHg38,605 netHg38,645 netHg38,783 netHg38,836 netHg38,868 netHg38,944 netHg38,947 netMm10,605 netMm10,645 netMm10,783 netMm10,836 netMm10,868 netMm10,944 netMm10,947 netRn6,608 netRn6,648 netRn6,786 netRn6,839 netRn6,871 netRn6,947 netRn6,950 rmsk,20 rmsk,34 sgpGene,27 simpleRepeat,62 simpleRepeat,80 transMapEnsemblV5,314 transMapEstV5,283 transMapRefSeqV5,283 transMapRnaV5,283 transMapV5,389 programs chainEquCab2,993 chainHg38,993 chainMm10,993 chainNetEquCab2,996 chainNetHg38,996 chainNetMm10,996 chainNetRn6,999 chainRn6,996 netEquCab2,993 netHg38,993 netMm10,993 netRn6,996 project refGene,333 xenoRefGene,299 projection transMapEnsemblV5,58 transMapEnsemblV5,321 transMapEstV5,290 transMapRefSeqV5,290 transMapRnaV5,290 transMapV5,396 projects est,570 est,589 est,619 intronEst,651 intronEst,670 intronEst,700 transMapEnsemblV5,710 transMapEstV5,679 transMapRefSeqV5,679 transMapRnaV5,679 transMapV5,785 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 properties snp148,1237 snp148,1501 snp148,2162 snp148Mult,1258 snp148Mult,1522 snp148Mult,2183 protein-coding augustusGene,74 refGene,18 refGene,232 xenoRefGene,16 xenoRefGene,198 proteins refGene,414 xenoRefGene,379 protoc geneid,169 provided snp148,369 snp148,504 snp148,2091 snp148,2136 snp148,2160 snp148Mult,390 snp148Mult,525 snp148Mult,2112 snp148Mult,2157 snp148Mult,2181 provides gap,33 gold,35 providing augustusGene,255 geneid,152 genscan,176 nestedRepeats,312 rmsk,335 sgpGene,112 provisional refGene,105 xenoRefGene,71 pruitt refGene,353 refGene,395 xenoRefGene,318 xenoRefGene,360 pseudogenes chainEquCab2,213 chainEquCab2,227 chainHg38,213 chainHg38,227 chainMm10,213 chainMm10,227 chainNetEquCab2,216 chainNetEquCab2,230 chainNetHg38,216 chainNetHg38,230 chainNetMm10,216 chainNetMm10,230 chainNetRn6,218 chainNetRn6,232 chainRn6,215 chainRn6,229 netEquCab2,213 netEquCab2,227 netHg38,213 netHg38,227 netMm10,213 netMm10,227 netRn6,215 netRn6,229 psl est,55 intronEst,139 mrna,36 transMapEnsemblV5,103 transMapEstV5,72 transMapRefSeqV5,72 transMapRnaV5,72 transMapV5,178 pslcdnafilter transMapEnsemblV5,352 transMapEstV5,321 transMapRefSeqV5,321 transMapRnaV5,321 transMapV5,427 pslmap transMapEnsemblV5,313 transMapEstV5,282 transMapRefSeqV5,282 transMapRnaV5,282 transMapV5,388 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 est,737 intronEst,821 mrna,454 snp148,2227 snp148Mult,2248 transMapEnsemblV5,694 transMapEstV5,663 transMapRefSeqV5,663 transMapRnaV5,663 transMapV5,769 publicly nestedRepeats,275 pull-down refGene,206 xenoRefGene,172 purpose simpleRepeat,32 pwas geneid,88 qgap chainEquCab2,717 chainHg38,717 chainMm10,717 chainNetEquCab2,720 chainNetHg38,720 chainNetMm10,720 chainNetRn6,723 chainRn6,720 netEquCab2,717 netHg38,717 netMm10,717 netRn6,720 quality est,73 mrna,54 snp148,1432 snp148,1449 snp148,1473 snp148,1544 snp148,1562 snp148Mult,1453 snp148Mult,1470 snp148Mult,1494 snp148Mult,1565 snp148Mult,1583 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 transMapEnsemblV5,561 transMapEstV5,530 transMapRefSeqV5,530 transMapRnaV5,530 transMapV5,636 queries snp148,2241 snp148Mult,2262 query rmsk,47 rmsk,61 sgpGene,65 question snp148,118 snp148Mult,87 questions snp148,2238 snp148Mult,2259 quickly mrna,339 refGene,185 transMapEnsemblV5,123 transMapEstV5,92 transMapRefSeqV5,92 transMapRnaV5,92 transMapV5,198 xenoRefGene,151 quite simpleRepeat,45 snp148,1317 snp148Mult,1338 quot chainEquCab2,26 chainEquCab2,28 chainEquCab2,33 chainEquCab2,35 chainEquCab2,101 chainEquCab2,103 chainEquCab2,230 chainEquCab2,232 chainEquCab2,234 chainEquCab2,236 chainEquCab2,338 chainEquCab2,340 chainEquCab2,679 chainEquCab2,681 chainHg38,26 chainHg38,28 chainHg38,33 chainHg38,35 chainHg38,101 chainHg38,103 chainHg38,230 chainHg38,232 chainHg38,234 chainHg38,236 chainHg38,338 chainHg38,340 chainHg38,679 chainHg38,681 chainMm10,26 chainMm10,28 chainMm10,33 chainMm10,35 chainMm10,101 chainMm10,103 chainMm10,230 chainMm10,232 chainMm10,234 chainMm10,236 chainMm10,338 chainMm10,340 chainMm10,679 chainMm10,681 chainNetEquCab2,29 chainNetEquCab2,31 chainNetEquCab2,36 chainNetEquCab2,38 chainNetEquCab2,104 chainNetEquCab2,106 chainNetEquCab2,233 chainNetEquCab2,235 chainNetEquCab2,237 chainNetEquCab2,239 chainNetEquCab2,341 chainNetEquCab2,343 chainNetEquCab2,682 chainNetEquCab2,684 chainNetHg38,29 chainNetHg38,31 chainNetHg38,36 chainNetHg38,38 chainNetHg38,104 chainNetHg38,106 chainNetHg38,233 chainNetHg38,235 chainNetHg38,237 chainNetHg38,239 chainNetHg38,341 chainNetHg38,343 chainNetHg38,682 chainNetHg38,684 chainNetMm10,29 chainNetMm10,31 chainNetMm10,36 chainNetMm10,38 chainNetMm10,104 chainNetMm10,106 chainNetMm10,233 chainNetMm10,235 chainNetMm10,237 chainNetMm10,239 chainNetMm10,341 chainNetMm10,343 chainNetMm10,682 chainNetMm10,684 chainNetRn6,30 chainNetRn6,32 chainNetRn6,37 chainNetRn6,39 chainNetRn6,106 chainNetRn6,108 chainNetRn6,235 chainNetRn6,237 chainNetRn6,239 chainNetRn6,241 chainNetRn6,344 chainNetRn6,346 chainNetRn6,685 chainNetRn6,687 chainRn6,27 chainRn6,29 chainRn6,34 chainRn6,36 chainRn6,103 chainRn6,105 chainRn6,232 chainRn6,234 chainRn6,236 chainRn6,238 chainRn6,341 chainRn6,343 chainRn6,682 chainRn6,684 est,239 est,241 est,290 est,292 est,306 est,308 est,342 est,344 est,359 est,361 gc5BaseBw,59 gc5BaseBw,63 intronEst,320 intronEst,322 intronEst,371 intronEst,373 intronEst,387 intronEst,389 intronEst,423 intronEst,425 intronEst,440 intronEst,442 mrna,185 mrna,187 mrna,236 mrna,238 mrna,252 mrna,254 mrna,288 mrna,290 mrna,305 mrna,307 netEquCab2,26 netEquCab2,28 netEquCab2,33 netEquCab2,35 netEquCab2,101 netEquCab2,103 netEquCab2,230 netEquCab2,232 netEquCab2,234 netEquCab2,236 netEquCab2,338 netEquCab2,340 netEquCab2,679 netEquCab2,681 netHg38,26 netHg38,28 netHg38,33 netHg38,35 netHg38,101 netHg38,103 netHg38,230 netHg38,232 netHg38,234 netHg38,236 netHg38,338 netHg38,340 netHg38,679 netHg38,681 netMm10,26 netMm10,28 netMm10,33 netMm10,35 netMm10,101 netMm10,103 netMm10,230 netMm10,232 netMm10,234 netMm10,236 netMm10,338 netMm10,340 netMm10,679 netMm10,681 netRn6,27 netRn6,29 netRn6,34 netRn6,36 netRn6,103 netRn6,105 netRn6,232 netRn6,234 netRn6,236 netRn6,238 netRn6,341 netRn6,343 netRn6,682 netRn6,684 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 sgpGene,34 sgpGene,40 sgpGene,103 sgpGene,109 snp148,1981 snp148,1982 snp148,2019 snp148,2020 snp148Mult,2002 snp148Mult,2003 snp148Mult,2040 snp148Mult,2041 windowmaskerSdust,82 windowmaskerSdust,84 r augustusGene,292 chainEquCab2,1043 chainEquCab2,1089 chainHg38,1043 chainHg38,1089 chainMm10,1043 chainMm10,1089 chainNetEquCab2,1046 chainNetEquCab2,1092 chainNetHg38,1046 chainNetHg38,1092 chainNetMm10,1046 chainNetMm10,1092 chainNetRn6,1049 chainNetRn6,1095 chainRn6,1046 chainRn6,1092 geneid,162 geneid,185 nestedRepeats,327 netEquCab2,1043 netEquCab2,1089 netHg38,1043 netHg38,1089 netMm10,1043 netMm10,1089 netRn6,1046 netRn6,1092 rmsk,350 snp148,1065 snp148Mult,1086 transMapEnsemblV5,760 transMapEstV5,729 transMapRefSeqV5,729 transMapRnaV5,729 transMapV5,835 windowmaskerSdust,99 r.s chainEquCab2,1008 chainHg38,1008 chainMm10,1008 chainNetEquCab2,1011 chainNetHg38,1011 chainNetMm10,1011 chainNetRn6,1014 chainRn6,1011 netEquCab2,1008 netHg38,1008 netMm10,1008 netRn6,1011 random augustusGene,120 est,572 intronEst,653 random-primed est,618 intronEst,699 range gap,150 nestedRepeats,227 nestedRepeats,236 snp148,1137 snp148Mult,1158 transMapEnsemblV5,656 transMapEstV5,625 transMapRefSeqV5,625 transMapRnaV5,625 transMapV5,731 ranked chainEquCab2,780 chainHg38,780 chainMm10,780 chainNetEquCab2,783 chainNetHg38,783 chainNetMm10,783 chainNetRn6,786 chainRn6,783 netEquCab2,780 netHg38,780 netMm10,780 netRn6,783 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 rat chainNetRn6,1 chainNetRn6,4 chainNetRn6,69 chainNetRn6,101 chainNetRn6,153 chainNetRn6,271 chainNetRn6,296 chainNetRn6,578 chainNetRn6,626 chainNetRn6Viewchain,2 chainNetRn6Viewnet,2 chainRn6,1 chainRn6,3 chainRn6,66 chainRn6,98 chainRn6,150 chainRn6,268 chainRn6,293 chainRn6,575 chainRn6,623 netRn6,1 netRn6,3 netRn6,66 netRn6,98 netRn6,150 netRn6,268 netRn6,293 netRn6,575 netRn6,623 rather est,573 intronEst,654 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 geneid,113 raw snp148,304 snp148,2194 snp148Mult,325 snp148Mult,2215 transMapEnsemblV5,519 transMapEstV5,488 transMapRefSeqV5,488 transMapRnaV5,488 transMapV5,594 rc chainEquCab2,1091 chainHg38,1091 chainMm10,1091 chainNetEquCab2,1094 chainNetHg38,1094 chainNetMm10,1094 chainNetRn6,1097 chainRn6,1094 netEquCab2,1091 netHg38,1091 netMm10,1091 netRn6,1094 rmsk,200 re-alignment snp148,940 snp148,982 snp148,1010 snp148,1169 snp148,1193 snp148,1887 snp148Mult,961 snp148Mult,1003 snp148Mult,1031 snp148Mult,1190 snp148Mult,1214 snp148Mult,1908 re-aligns snp148,1931 snp148Mult,1952 read est,471 gap,95 intronEst,552 reading snp148,673 snp148Mult,694 rearrangement chainEquCab2,289 chainEquCab2,492 chainEquCab2,1056 chainHg38,289 chainHg38,492 chainHg38,1056 chainMm10,289 chainMm10,492 chainMm10,1056 chainNetEquCab2,292 chainNetEquCab2,495 chainNetEquCab2,1059 chainNetHg38,292 chainNetHg38,495 chainNetHg38,1059 chainNetMm10,292 chainNetMm10,495 chainNetMm10,1059 chainNetRn6,294 chainNetRn6,498 chainNetRn6,1062 chainRn6,291 chainRn6,495 chainRn6,1059 netEquCab2,289 netEquCab2,492 netEquCab2,1056 netHg38,289 netHg38,492 netHg38,1056 netMm10,289 netMm10,492 netMm10,1056 netRn6,291 netRn6,495 netRn6,1059 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 reasonably est,539 est,562 intronEst,620 intronEst,643 reciprocal transMapEnsemblV5,240 transMapEstV5,209 transMapRefSeqV5,209 transMapRnaV5,209 transMapV5,66 transMapV5,315 recomputed snp148,1948 snp148Mult,1969 record refGene,100 xenoRefGene,66 records refGene,63 reduced intronEst,105 ref snp148,1443 snp148Mult,1464 refallelemismatch snp148,1117 snp148Mult,1138 refallelerevcomp snp148,1138 snp148Mult,1159 refer genscan,145 snp148,2231 snp148Mult,2252 reference refGene,27 refGene,46 refGene,380 refGene,402 sgpGene,86 snp148,67 snp148,113 snp148,182 snp148,353 snp148,364 snp148,964 snp148,1070 snp148,1119 snp148,1128 snp148,1140 snp148,1151 snp148,1452 snp148,1618 snp148,1701 snp148,1844 snp148,1855 snp148,1872 snp148,2081 snp148Mult,62 snp148Mult,82 snp148Mult,203 snp148Mult,374 snp148Mult,385 snp148Mult,985 snp148Mult,1091 snp148Mult,1140 snp148Mult,1149 snp148Mult,1161 snp148Mult,1172 snp148Mult,1473 snp148Mult,1639 snp148Mult,1722 snp148Mult,1865 snp148Mult,1876 snp148Mult,1893 snp148Mult,2102 ucscToRefSeq,24 xenoRefGene,30 xenoRefGene,345 xenoRefGene,367 references augustusGene,286 chainEquCab2,1006 chainHg38,1006 chainMm10,1006 chainNetEquCab2,1009 chainNetHg38,1009 chainNetMm10,1009 chainNetRn6,1012 chainRn6,1009 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 est,743 geneid,155 genscan,153 genscan,180 intronEst,827 microsat,113 mrna,460 nestedRepeats,66 nestedRepeats,323 netEquCab2,1006 netHg38,1006 netMm10,1006 netRn6,1009 refGene,334 rmsk,102 rmsk,346 simpleRepeat,73 snp148,2250 snp148Mult,2271 transMapEnsemblV5,711 transMapEstV5,680 transMapRefSeqV5,680 transMapRnaV5,680 transMapV5,786 windowmaskerSdust,89 xenoRefGene,300 refgene transMapEnsemblV5,593 transMapEstV5,562 transMapRefSeqV5,2 transMapRefSeqV5,562 transMapRnaV5,562 transMapV5,668 reflects rmsk,213 refseq refGene,1 refGene,3 refGene,12 refGene,30 refGene,48 refGene,62 refGene,99 refGene,251 refGene,332 refGene,375 refGene,404 snp148,439 snp148,449 snp148,1802 snp148,1811 snp148,1829 snp148Mult,460 snp148Mult,470 snp148Mult,1823 snp148Mult,1832 snp148Mult,1850 transMapEnsemblV5,170 transMapEnsemblV5,705 transMapEstV5,139 transMapEstV5,674 transMapRefSeqV5,4 transMapRefSeqV5,18 transMapRefSeqV5,139 transMapRefSeqV5,674 transMapRnaV5,139 transMapRnaV5,674 transMapV5,245 transMapV5,780 ucscToRefSeq,1 ucscToRefSeq,3 ucscToRefSeq,27 xenoRefGene,2 xenoRefGene,4 xenoRefGene,33 xenoRefGene,65 xenoRefGene,298 xenoRefGene,340 xenoRefGene,369 refsnp snp148,1530 snp148Mult,1551 region chainEquCab2,198 chainEquCab2,395 chainHg38,198 chainHg38,395 chainMm10,198 chainMm10,395 chainNetEquCab2,201 chainNetEquCab2,398 chainNetHg38,201 chainNetHg38,398 chainNetMm10,201 chainNetMm10,398 chainNetRn6,203 chainNetRn6,401 chainRn6,200 chainRn6,398 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 netEquCab2,198 netEquCab2,395 netHg38,198 netHg38,395 netMm10,198 netMm10,395 netRn6,200 netRn6,398 snp148,315 snp148,742 snp148,762 snp148Mult,336 snp148Mult,763 snp148Mult,783 regions augustusGene,77 chainEquCab2,16 chainEquCab2,134 chainEquCab2,282 chainHg38,16 chainHg38,134 chainHg38,282 chainMm10,16 chainMm10,134 chainMm10,282 chainNetEquCab2,19 chainNetEquCab2,137 chainNetEquCab2,285 chainNetHg38,19 chainNetHg38,137 chainNetHg38,285 chainNetMm10,19 chainNetMm10,137 chainNetMm10,285 chainNetRn6,20 chainNetRn6,139 chainNetRn6,287 chainRn6,17 chainRn6,136 chainRn6,284 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 genscan,49 microsat,14 netEquCab2,16 netEquCab2,134 netEquCab2,282 netHg38,16 netHg38,134 netHg38,282 netMm10,16 netMm10,134 netMm10,282 netRn6,17 netRn6,136 netRn6,284 simpleRepeat,39 transMapEnsemblV5,302 transMapEnsemblV5,602 transMapEstV5,271 transMapEstV5,571 transMapRefSeqV5,271 transMapRefSeqV5,571 transMapRnaV5,271 transMapRnaV5,571 transMapV5,377 transMapV5,677 regulaci geneid,40 sgpGene,49 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,243 transMapV5,75 relationship chainEquCab2,846 chainHg38,846 chainMm10,846 chainNetEquCab2,849 chainNetHg38,849 chainNetMm10,849 chainNetRn6,852 chainRn6,849 est,94 intronEst,175 netEquCab2,846 netHg38,846 netMm10,846 netRn6,849 relative chainEquCab2,862 chainHg38,862 chainMm10,862 chainNetEquCab2,865 chainNetHg38,865 chainNetMm10,865 chainNetRn6,868 chainRn6,865 gap,79 gold,110 netEquCab2,862 netHg38,862 netMm10,862 netRn6,865 snp148,350 snp148,361 snp148,1719 snp148,1748 snp148,1797 snp148,1821 snp148Mult,371 snp148Mult,382 snp148Mult,1740 snp148Mult,1769 snp148Mult,1818 snp148Mult,1842 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 relevant est,158 intronEst,239 mrna,104 remaining chainEquCab2,685 chainHg38,685 chainMm10,685 chainNetEquCab2,688 chainNetHg38,688 chainNetMm10,688 chainNetRn6,691 chainRn6,688 netEquCab2,685 netHg38,685 netMm10,685 netRn6,688 removed chainEquCab2,576 chainHg38,576 chainMm10,576 chainNetEquCab2,579 chainNetHg38,579 chainNetMm10,579 chainNetRn6,582 chainRn6,579 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 netEquCab2,576 netHg38,576 netMm10,576 netRn6,579 rmsk,279 removes transMapEnsemblV5,307 transMapEstV5,276 transMapRefSeqV5,276 transMapRnaV5,276 transMapV5,382 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeating rmsk,2 repeatmasker chainEquCab2,943 chainHg38,943 chainMm10,943 chainNetEquCab2,946 chainNetHg38,946 chainNetMm10,946 chainNetRn6,949 chainRn6,946 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netEquCab2,943 netHg38,943 netMm10,943 netRn6,946 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 snp148,1996 snp148Mult,2017 repeats chainEquCab2,935 chainHg38,935 chainMm10,935 chainNetEquCab2,938 chainNetHg38,938 chainNetMm10,938 chainNetRn6,941 chainRn6,938 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netEquCab2,935 netHg38,935 netMm10,935 netRn6,938 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 snp148,11 snp148,289 snp148,2001 snp148Mult,17 snp148Mult,310 snp148Mult,2022 windowmaskerSdust,11 repeats.bed windowmaskerSdust,73 windowmaskerSdust,75 repetitive nestedRepeats,351 rmsk,374 snp148,1991 snp148Mult,2012 reported snp148,426 snp148,1041 snp148Mult,447 snp148Mult,1062 reports snp148,312 snp148,861 snp148Mult,333 snp148Mult,882 represent chainEquCab2,132 chainEquCab2,159 chainEquCab2,442 chainEquCab2,447 chainHg38,132 chainHg38,159 chainHg38,442 chainHg38,447 chainMm10,132 chainMm10,159 chainMm10,442 chainMm10,447 chainNetEquCab2,135 chainNetEquCab2,162 chainNetEquCab2,445 chainNetEquCab2,450 chainNetHg38,135 chainNetHg38,162 chainNetHg38,445 chainNetHg38,450 chainNetMm10,135 chainNetMm10,162 chainNetMm10,445 chainNetMm10,450 chainNetRn6,137 chainNetRn6,164 chainNetRn6,448 chainNetRn6,453 chainRn6,134 chainRn6,161 chainRn6,445 chainRn6,450 est,39 intronEst,51 netEquCab2,132 netEquCab2,159 netEquCab2,442 netEquCab2,447 netHg38,132 netHg38,159 netHg38,442 netHg38,447 netMm10,132 netMm10,159 netMm10,442 netMm10,447 netRn6,134 netRn6,161 netRn6,445 netRn6,450 representation snp148,2104 snp148Mult,2125 represented gap,70 rmsk,49 snp148,213 snp148Mult,234 representing gap,113 requiring intronEst,93 res chainEquCab2,1101 chainHg38,1101 chainMm10,1101 chainNetEquCab2,1104 chainNetHg38,1104 chainNetMm10,1104 chainNetRn6,1107 chainRn6,1104 est,761 est,786 est,806 geneid,190 intronEst,845 intronEst,870 intronEst,890 microsat,127 mrna,478 mrna,503 mrna,523 netEquCab2,1101 netHg38,1101 netMm10,1101 netRn6,1104 refGene,343 refGene,384 refGene,417 simpleRepeat,87 snp148,2274 snp148Mult,2295 transMapEnsemblV5,745 transMapEstV5,714 transMapRefSeqV5,714 transMapRnaV5,714 transMapV5,820 xenoRefGene,308 xenoRefGene,349 xenoRefGene,382 research nestedRepeats,54 rmsk,90 resolution snp148,166 snp148Mult,187 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 result chainEquCab2,172 chainHg38,172 chainMm10,172 chainNetEquCab2,175 chainNetHg38,175 chainNetMm10,175 chainNetRn6,177 chainRn6,174 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netEquCab2,172 netHg38,172 netMm10,172 netRn6,174 transMapEnsemblV5,505 transMapEstV5,474 transMapRefSeqV5,474 transMapRnaV5,474 transMapV5,580 resulting chainEquCab2,595 chainHg38,595 chainMm10,595 chainNetEquCab2,598 chainNetHg38,598 chainNetMm10,598 chainNetRn6,601 chainRn6,598 netEquCab2,595 netHg38,595 netMm10,595 netRn6,598 snp148,515 snp148,587 snp148,624 snp148,654 snp148Mult,536 snp148Mult,608 snp148Mult,645 snp148Mult,675 transMapEnsemblV5,82 transMapEnsemblV5,335 transMapEnsemblV5,347 transMapEnsemblV5,492 transMapEstV5,51 transMapEstV5,304 transMapEstV5,316 transMapEstV5,461 transMapRefSeqV5,51 transMapRefSeqV5,304 transMapRefSeqV5,316 transMapRefSeqV5,461 transMapRnaV5,51 transMapRnaV5,304 transMapRnaV5,316 transMapRnaV5,461 transMapV5,52 transMapV5,410 transMapV5,422 transMapV5,567 retrieve est,581 intronEst,662 retroposons rmsk,173 reverse est,456 est,490 est,507 intronEst,537 intronEst,571 intronEst,588 snp148,1146 snp148Mult,1167 review refGene,97 xenoRefGene,63 reviewed refGene,107 xenoRefGene,73 rgsc chainNetRn6,7 chainNetRn6,72 chainNetRn6,307 chainNetRn6Viewchain,5 chainNetRn6Viewnet,5 chainRn6,6 chainRn6,69 chainRn6,304 netRn6,6 netRn6,69 netRn6,304 rn6 chainNetRn6,9 chainNetRn6,74 chainNetRn6,309 chainNetRn6Viewchain,7 chainNetRn6Viewnet,7 chainRn6,8 chainRn6,71 chainRn6,306 netRn6,8 netRn6,71 netRn6,306 rna est,102 est,450 geneid,30 geneid,149 intronEst,183 intronEst,531 refGene,26 refGene,274 refGene,320 rmsk,186 rmsk,189 sgpGene,38 sgpGene,107 snp148,568 snp148Mult,589 transMapEnsemblV5,596 transMapEstV5,565 transMapRefSeqV5,565 transMapRnaV5,2 transMapRnaV5,5 transMapRnaV5,565 transMapV5,671 xenoRefGene,29 xenoRefGene,240 xenoRefGene,286 rnas refGene,252 xenoRefGene,218 robert chainEquCab2,983 chainHg38,983 chainMm10,983 chainNetEquCab2,986 chainNetHg38,986 chainNetMm10,986 chainNetRn6,989 chainRn6,986 nestedRepeats,307 netEquCab2,983 netHg38,983 netMm10,983 netRn6,986 rmsk,330 roderic geneid,23 sgpGene,30 role snp148,471 snp148Mult,492 rolling rmsk,201 ross chainEquCab2,932 chainHg38,932 chainMm10,932 chainNetEquCab2,935 chainNetHg38,935 chainNetMm10,935 chainNetRn6,938 chainRn6,935 netEquCab2,932 netHg38,932 netMm10,932 netRn6,935 row nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 rs_fasta snp148,2072 snp148,2180 snp148Mult,2093 snp148Mult,2201 run chainEquCab2,648 chainHg38,648 chainMm10,648 chainNetEquCab2,651 chainNetHg38,651 chainNetMm10,651 chainNetRn6,654 chainRn6,651 netEquCab2,648 netHg38,648 netMm10,648 netRn6,651 windowmaskerSdust,53 s augustusGene,105 augustusGene,222 augustusGene,320 chainEquCab2,1051 chainEquCab2,1068 chainEquCab2,1081 chainHg38,1051 chainHg38,1068 chainHg38,1081 chainMm10,1051 chainMm10,1068 chainMm10,1081 chainNetEquCab2,1054 chainNetEquCab2,1071 chainNetEquCab2,1084 chainNetHg38,1054 chainNetHg38,1071 chainNetHg38,1084 chainNetMm10,1054 chainNetMm10,1071 chainNetMm10,1084 chainNetRn6,1057 chainNetRn6,1074 chainNetRn6,1087 chainRn6,1054 chainRn6,1071 chainRn6,1084 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 geneid,26 genscan,191 genscan,195 genscan,211 nestedRepeats,286 netEquCab2,1051 netEquCab2,1068 netEquCab2,1081 netHg38,1051 netHg38,1068 netHg38,1081 netMm10,1051 netMm10,1068 netMm10,1081 netRn6,1054 netRn6,1071 netRn6,1084 rmsk,18 rmsk,293 sgpGene,33 snp148,104 snp148,432 snp148,885 snp148,920 snp148,939 snp148,953 snp148,981 snp148,1009 snp148,1107 snp148,1168 snp148,1192 snp148,1241 snp148,1341 snp148,1369 snp148,1467 snp148,1496 snp148,1665 snp148,1788 snp148,1793 snp148,1810 snp148,1817 snp148,1849 snp148,1954 snp148,2107 snp148Mult,73 snp148Mult,453 snp148Mult,906 snp148Mult,941 snp148Mult,960 snp148Mult,974 snp148Mult,1002 snp148Mult,1030 snp148Mult,1128 snp148Mult,1189 snp148Mult,1213 snp148Mult,1262 snp148Mult,1362 snp148Mult,1390 snp148Mult,1488 snp148Mult,1517 snp148Mult,1686 snp148Mult,1809 snp148Mult,1814 snp148Mult,1831 snp148Mult,1838 snp148Mult,1870 snp148Mult,1975 snp148Mult,2128 transMapEnsemblV5,730 transMapEstV5,699 transMapRefSeqV5,699 transMapRnaV5,699 transMapV5,805 saccharomyces augustusGene,224 salzberg genscan,190 same chainEquCab2,521 chainEquCab2,536 chainHg38,521 chainHg38,536 chainMm10,521 chainMm10,536 chainNetEquCab2,524 chainNetEquCab2,539 chainNetHg38,524 chainNetHg38,539 chainNetMm10,524 chainNetMm10,539 chainNetRn6,527 chainNetRn6,542 chainRn6,524 chainRn6,539 nestedRepeats,143 netEquCab2,521 netEquCab2,536 netHg38,521 netHg38,536 netMm10,521 netMm10,536 netRn6,524 netRn6,539 snp148,338 snp148,907 snp148,1441 snp148,1775 snp148Mult,359 snp148Mult,928 snp148Mult,1462 snp148Mult,1796 sample augustusGene,134 snp148,819 snp148,840 snp148,1043 snp148,1666 snp148Mult,840 snp148Mult,861 snp148Mult,1064 snp148Mult,1687 samples snp148,1653 snp148Mult,1674 sampling augustusGene,130 sanborn transMapEnsemblV5,787 transMapEstV5,756 transMapRefSeqV5,756 transMapRnaV5,756 transMapV5,862 santa chainEquCab2,956 chainEquCab2,1001 chainHg38,956 chainHg38,1001 chainMm10,956 chainMm10,1001 chainNetEquCab2,959 chainNetEquCab2,1004 chainNetHg38,959 chainNetHg38,1004 chainNetMm10,959 chainNetMm10,1004 chainNetRn6,962 chainNetRn6,1007 chainRn6,959 chainRn6,1004 netEquCab2,956 netEquCab2,1001 netHg38,956 netHg38,1001 netMm10,956 netMm10,1001 netRn6,959 netRn6,1004 satellite rmsk,184 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 sayers est,756 intronEst,840 mrna,473 scaffold gap,139 gold,81 gold,119 scaffolds gap,130 gap,142 sch windowmaskerSdust,94 schwartz chainEquCab2,923 chainEquCab2,1080 chainHg38,923 chainHg38,1080 chainMm10,923 chainMm10,1080 chainNetEquCab2,926 chainNetEquCab2,1083 chainNetHg38,926 chainNetHg38,1083 chainNetMm10,926 chainNetMm10,1083 chainNetRn6,929 chainNetRn6,1086 chainRn6,926 chainRn6,1083 netEquCab2,923 netEquCab2,1080 netHg38,923 netHg38,1080 netMm10,923 netMm10,1080 netRn6,926 netRn6,1083 sci chainEquCab2,1066 chainHg38,1066 chainMm10,1066 chainNetEquCab2,1069 chainNetHg38,1069 chainNetMm10,1069 chainNetRn6,1072 chainRn6,1069 netEquCab2,1066 netHg38,1066 netMm10,1066 netRn6,1069 science genscan,204 scientists est,741 intronEst,825 mrna,458 refGene,325 transMapEnsemblV5,698 transMapEstV5,667 transMapRefSeqV5,667 transMapRnaV5,667 transMapV5,773 xenoRefGene,291 score chainEquCab2,677 chainHg38,677 chainMm10,677 chainNetEquCab2,680 chainNetHg38,680 chainNetMm10,680 chainNetRn6,683 chainRn6,680 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netEquCab2,677 netHg38,677 netMm10,677 netRn6,680 scored geneid,80 geneid,98 scores geneid,104 geneid,138 scoring chainEquCab2,77 chainEquCab2,87 chainEquCab2,656 chainEquCab2,673 chainEquCab2,1028 chainHg38,77 chainHg38,87 chainHg38,656 chainHg38,673 chainHg38,1028 chainMm10,77 chainMm10,87 chainMm10,656 chainMm10,673 chainMm10,1028 chainNetEquCab2,80 chainNetEquCab2,90 chainNetEquCab2,659 chainNetEquCab2,676 chainNetEquCab2,1031 chainNetHg38,80 chainNetHg38,90 chainNetHg38,659 chainNetHg38,676 chainNetHg38,1031 chainNetMm10,80 chainNetMm10,90 chainNetMm10,659 chainNetMm10,676 chainNetMm10,1031 chainNetRn6,82 chainNetRn6,92 chainNetRn6,662 chainNetRn6,679 chainNetRn6,1034 chainRn6,79 chainRn6,89 chainRn6,659 chainRn6,676 chainRn6,1031 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netEquCab2,77 netEquCab2,87 netEquCab2,656 netEquCab2,673 netEquCab2,1028 netHg38,77 netHg38,87 netHg38,656 netHg38,673 netHg38,1028 netMm10,77 netMm10,87 netMm10,656 netMm10,673 netMm10,1028 netRn6,79 netRn6,89 netRn6,659 netRn6,676 netRn6,1031 scott chainEquCab2,922 chainHg38,922 chainMm10,922 chainNetEquCab2,925 chainNetHg38,925 chainNetMm10,925 chainNetRn6,928 chainRn6,925 netEquCab2,922 netHg38,922 netMm10,922 netRn6,925 screens nestedRepeats,32 rmsk,22 scrna rmsk,193 sdust windowmaskerSdust,2 windowmaskerSdust,8 windowmaskerSdust,68 search transMapEnsemblV5,799 transMapEstV5,768 transMapRefSeqV5,768 transMapRnaV5,768 transMapV5,874 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 searls genscan,192 section genscan,154 nestedRepeats,67 rmsk,103 snp148,777 snp148,866 snp148Mult,798 snp148Mult,887 sections chainEquCab2,803 chainHg38,803 chainMm10,803 chainNetEquCab2,806 chainNetHg38,806 chainNetMm10,806 chainNetRn6,809 chainRn6,806 netEquCab2,803 netHg38,803 netMm10,803 netRn6,806 see augustusGene,43 genscan,58 intronEst,123 microsat,101 nestedRepeats,296 nestedRepeats,370 refGene,72 refGene,242 rmsk,319 rmsk,393 simpleRepeat,63 snp148,1244 snp148,1325 snp148,2169 snp148Mult,1265 snp148Mult,1346 snp148Mult,2190 transMapEnsemblV5,230 transMapEnsemblV5,572 transMapEstV5,199 transMapEstV5,541 transMapRefSeqV5,199 transMapRefSeqV5,541 transMapRnaV5,199 transMapRnaV5,541 transMapV5,305 transMapV5,647 xenoRefGene,208 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select genscan,91 refGene,195 xenoRefGene,161 selected est,294 est,310 est,363 intronEst,375 intronEst,391 intronEst,444 mrna,240 mrna,256 mrna,309 snp148,1757 snp148Mult,1778 transMapEnsemblV5,213 transMapEnsemblV5,250 transMapEnsemblV5,261 transMapEnsemblV5,329 transMapEstV5,182 transMapEstV5,219 transMapEstV5,230 transMapEstV5,298 transMapRefSeqV5,182 transMapRefSeqV5,219 transMapRefSeqV5,230 transMapRefSeqV5,298 transMapRnaV5,182 transMapRnaV5,219 transMapRnaV5,230 transMapRnaV5,298 transMapV5,288 transMapV5,325 transMapV5,336 transMapV5,404 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,118 sensitivity transMapV5,148 sep chainEquCab2,4 chainEquCab2,66 chainEquCab2,300 chainEquCab2,1071 chainHg38,1071 chainMm10,1071 chainNetEquCab2,5 chainNetEquCab2,69 chainNetEquCab2,303 chainNetEquCab2,1074 chainNetEquCab2Viewchain,3 chainNetEquCab2Viewnet,3 chainNetHg38,1074 chainNetMm10,1074 chainNetRn6,1077 chainRn6,1074 nestedRepeats,356 netEquCab2,4 netEquCab2,66 netEquCab2,300 netEquCab2,1071 netHg38,1071 netMm10,1071 netRn6,1074 rmsk,379 separated est,265 intronEst,346 mrna,211 sequence augustusGene,33 augustusGene,71 chainEquCab2,166 chainEquCab2,292 chainEquCab2,1031 chainHg38,166 chainHg38,292 chainHg38,1031 chainMm10,166 chainMm10,292 chainMm10,1031 chainNetEquCab2,169 chainNetEquCab2,295 chainNetEquCab2,1034 chainNetHg38,169 chainNetHg38,295 chainNetHg38,1034 chainNetMm10,169 chainNetMm10,295 chainNetMm10,1034 chainNetRn6,171 chainNetRn6,297 chainNetRn6,1037 chainRn6,168 chainRn6,294 chainRn6,1034 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 est,19 est,90 est,399 est,408 est,582 est,719 est,731 est,738 gap,55 geneid,83 gold,54 gold,158 intronEst,21 intronEst,74 intronEst,171 intronEst,480 intronEst,489 intronEst,663 intronEst,800 intronEst,815 intronEst,822 mrna,345 mrna,435 mrna,448 mrna,455 netEquCab2,166 netEquCab2,292 netEquCab2,1031 netHg38,166 netHg38,292 netHg38,1031 netMm10,166 netMm10,292 netMm10,1031 netRn6,168 netRn6,294 netRn6,1034 refGene,309 refGene,321 refGene,403 refGene,408 rmsk,48 rmsk,62 snp148,183 snp148,305 snp148,319 snp148,484 snp148,497 snp148,509 snp148,538 snp148,550 snp148,575 snp148,603 snp148,640 snp148,664 snp148,695 snp148,909 snp148,914 snp148,1939 snp148,1969 snp148,1978 snp148,1993 snp148,2121 snp148Mult,204 snp148Mult,326 snp148Mult,340 snp148Mult,505 snp148Mult,518 snp148Mult,530 snp148Mult,559 snp148Mult,571 snp148Mult,596 snp148Mult,624 snp148Mult,661 snp148Mult,685 snp148Mult,716 snp148Mult,930 snp148Mult,935 snp148Mult,1960 snp148Mult,1990 snp148Mult,1999 snp148Mult,2014 snp148Mult,2142 transMapEnsemblV5,129 transMapEnsemblV5,688 transMapEnsemblV5,695 transMapEstV5,98 transMapEstV5,657 transMapEstV5,664 transMapRefSeqV5,98 transMapRefSeqV5,657 transMapRefSeqV5,664 transMapRnaV5,98 transMapRnaV5,657 transMapRnaV5,664 transMapV5,204 transMapV5,763 transMapV5,770 ucscToINSDC,7 ucscToINSDC,30 ucscToRefSeq,25 windowmaskerSdust,17 xenoRefGene,275 xenoRefGene,287 xenoRefGene,368 xenoRefGene,373 sequenced windowmaskerSdust,104 sequences est,30 est,601 est,609 geneid,61 gold,14 intronEst,42 intronEst,682 intronEst,690 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 refGene,28 refGene,47 refGene,381 rmsk,24 rmsk,32 sgpGene,82 simpleRepeat,84 snp148,106 snp148,130 snp148,925 snp148,943 snp148,955 snp148,985 snp148,1013 snp148,1172 snp148,1196 snp148,1890 snp148,1902 snp148,1934 snp148Mult,75 snp148Mult,99 snp148Mult,946 snp148Mult,964 snp148Mult,976 snp148Mult,1006 snp148Mult,1034 snp148Mult,1193 snp148Mult,1217 snp148Mult,1911 snp148Mult,1923 snp148Mult,1955 xenoRefGene,31 xenoRefGene,346 sequencing chainEquCab2,885 chainHg38,885 chainMm10,885 chainNetEquCab2,888 chainNetHg38,888 chainNetMm10,888 chainNetRn6,891 chainRn6,888 cytoBandIdeo,9 gap,6 gc5BaseBw,10 gold,7 netEquCab2,885 netHg38,885 netMm10,885 netRn6,888 ucscToINSDC,12 ucscToRefSeq,7 server snp148,2222 snp148,2229 snp148Mult,2243 snp148Mult,2250 transMapEnsemblV5,559 transMapEstV5,528 transMapRefSeqV5,528 transMapRnaV5,528 transMapV5,634 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 set geneid,124 snp148,1574 snp148Mult,1595 transMapEnsemblV5,280 transMapEstV5,249 transMapRefSeqV5,249 transMapRnaV5,249 transMapV5,355 sets augustusGene,159 snp148,1461 snp148,1723 snp148,1727 snp148Mult,1482 snp148Mult,1744 snp148Mult,1748 setting snp148,82 snp148,1349 snp148Mult,1370 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 several est,424 intronEst,505 mrna,363 snp148,240 snp148,788 snp148,850 snp148,1236 snp148,1499 snp148Mult,261 snp148Mult,809 snp148Mult,871 snp148Mult,1257 snp148Mult,1520 transMapEnsemblV5,138 transMapEstV5,107 transMapRefSeqV5,107 transMapRnaV5,107 transMapV5,213 sgp sgpGene,1 sgpGene,3 sgp2 sgpGene,23 sgpGene,66 shade nestedRepeats,194 shaded est,68 mrna,49 nestedRepeats,182 shades nestedRepeats,202 shading intronEst,147 nestedRepeats,240 refGene,92 rmsk,208 rmsk,239 xenoRefGene,58 shared snp148,2134 snp148Mult,2155 sherry snp148,2251 snp148Mult,2272 short rmsk,153 snp148,287 snp148,1603 snp148Mult,308 snp148Mult,1624 shortened snp148,596 snp148Mult,617 shorter snp148,1858 snp148Mult,1879 shotgun gold,152 should est,330 est,634 intronEst,411 intronEst,715 mrna,276 snp148,1534 snp148Mult,1555 show intronEst,30 intronEst,63 refGene,158 snp148,1743 snp148Mult,1764 xenoRefGene,124 shown chainEquCab2,41 chainEquCab2,54 chainHg38,41 chainHg38,54 chainMm10,41 chainMm10,54 chainNetEquCab2,44 chainNetEquCab2,57 chainNetHg38,44 chainNetHg38,57 chainNetMm10,44 chainNetMm10,57 chainNetRn6,45 chainNetRn6,58 chainRn6,42 chainRn6,55 est,148 gold,102 intronEst,229 microsat,48 mrna,94 netEquCab2,41 netEquCab2,54 netHg38,41 netHg38,54 netMm10,41 netMm10,54 netRn6,42 netRn6,55 snp148,149 snp148,458 snp148,790 snp148,1971 snp148,2008 snp148Mult,170 snp148Mult,479 snp148Mult,811 snp148Mult,1992 snp148Mult,2029 shows augustusGene,16 augustusGene,109 chainEquCab2,15 chainEquCab2,62 chainEquCab2,263 chainHg38,15 chainHg38,62 chainHg38,263 chainMm10,15 chainMm10,62 chainMm10,263 chainNetEquCab2,18 chainNetEquCab2,65 chainNetEquCab2,266 chainNetHg38,18 chainNetHg38,65 chainNetHg38,266 chainNetMm10,18 chainNetMm10,65 chainNetMm10,266 chainNetRn6,19 chainNetRn6,66 chainNetRn6,268 chainRn6,16 chainRn6,63 chainRn6,265 est,14 gap,11 gc5BaseBw,17 geneid,14 genscan,14 gold,12 intronEst,16 mrna,15 nestedRepeats,17 nestedRepeats,81 netEquCab2,15 netEquCab2,62 netEquCab2,263 netHg38,15 netHg38,62 netHg38,263 netMm10,15 netMm10,62 netMm10,263 netRn6,16 netRn6,63 netRn6,265 refGene,15 sgpGene,18 xenoRefGene,14 side est,597 gap,88 intronEst,678 siepel transMapEnsemblV5,712 transMapEstV5,681 transMapRefSeqV5,681 transMapRnaV5,681 transMapV5,787 signal augustusGene,49 augustusGene,64 signals genscan,35 genscan,188 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 signs intronEst,31 similar nestedRepeats,199 snp148,137 snp148Mult,106 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 snp148,4 snp148,29 snp148Mult,4 snp148Mult,39 simultaneously chainEquCab2,99 chainHg38,99 chainMm10,99 chainNetEquCab2,102 chainNetHg38,102 chainNetMm10,102 chainNetRn6,104 chainRn6,101 netEquCab2,99 netHg38,99 netMm10,99 netRn6,101 since chainEquCab2,570 chainHg38,570 chainMm10,570 chainNetEquCab2,573 chainNetHg38,573 chainNetMm10,573 chainNetRn6,576 chainRn6,573 netEquCab2,570 netHg38,570 netMm10,570 netRn6,573 sine rmsk,157 single chainEquCab2,126 chainEquCab2,135 chainEquCab2,619 chainEquCab2,624 chainHg38,126 chainHg38,135 chainHg38,619 chainHg38,624 chainMm10,126 chainMm10,135 chainMm10,619 chainMm10,624 chainNetEquCab2,129 chainNetEquCab2,138 chainNetEquCab2,622 chainNetEquCab2,627 chainNetHg38,129 chainNetHg38,138 chainNetHg38,622 chainNetHg38,627 chainNetMm10,129 chainNetMm10,138 chainNetMm10,622 chainNetMm10,627 chainNetRn6,131 chainNetRn6,140 chainNetRn6,625 chainNetRn6,630 chainRn6,128 chainRn6,137 chainRn6,622 chainRn6,627 est,631 est,683 intronEst,712 intronEst,764 mrna,399 nestedRepeats,178 netEquCab2,126 netEquCab2,135 netEquCab2,619 netEquCab2,624 netHg38,126 netHg38,135 netHg38,619 netHg38,624 netMm10,126 netMm10,135 netMm10,619 netMm10,624 netRn6,128 netRn6,137 netRn6,622 netRn6,627 refGene,273 snp148,18 snp148,151 snp148,189 snp148,196 snp148,206 snp148,247 snp148,248 snp148,255 snp148,1089 snp148,1218 snp148,1640 snp148,1644 snp148Mult,28 snp148Mult,172 snp148Mult,210 snp148Mult,217 snp148Mult,227 snp148Mult,268 snp148Mult,269 snp148Mult,276 snp148Mult,1110 snp148Mult,1239 snp148Mult,1661 snp148Mult,1665 transMapEnsemblV5,478 transMapEstV5,447 transMapRefSeqV5,447 transMapRnaV5,447 transMapV5,553 xenoRefGene,239 single-base snp148,1158 snp148,1184 snp148,1540 snp148Mult,1179 snp148Mult,1205 snp148Mult,1561 single-lined chainEquCab2,206 chainHg38,206 chainMm10,206 chainNetEquCab2,209 chainNetHg38,209 chainNetMm10,209 chainNetRn6,211 chainRn6,208 netEquCab2,206 netHg38,206 netMm10,206 netRn6,208 single-read est,29 intronEst,41 single-word snp148,1604 snp148Mult,1625 singleclasslongerspan snp148,1153 snp148Mult,1174 singleclassquadallelic snp148,1215 snp148Mult,1236 singleclasstriallelic snp148,1214 snp148Mult,1235 singleclasszerospan snp148,1179 snp148Mult,1200 sirotkin snp148,2263 snp148Mult,2284 site genscan,158 snp148,814 snp148Mult,835 windowmaskerSdust,45 sites augustusGene,55 augustusGene,60 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 geneid,72 geneid,95 geneid,108 snp148,126 snp148,133 snp148Mult,95 snp148Mult,102 size gap,136 gap,149 snp148,1667 snp148Mult,1688 skepticism est,639 intronEst,720 sm refGene,358 xenoRefGene,323 small snp148,22 snp148Mult,32 smallsize chainEquCab2,703 chainHg38,703 chainMm10,703 chainNetEquCab2,706 chainNetHg38,706 chainNetMm10,706 chainNetRn6,709 chainRn6,706 netEquCab2,703 netHg38,703 netMm10,703 netRn6,706 smigielski snp148,2261 snp148Mult,2282 smit chainEquCab2,940 chainEquCab2,1084 chainHg38,940 chainHg38,1084 chainMm10,940 chainMm10,1084 chainNetEquCab2,943 chainNetEquCab2,1087 chainNetHg38,943 chainNetHg38,1087 chainNetMm10,943 chainNetMm10,1087 chainNetRn6,946 chainNetRn6,1090 chainRn6,943 chainRn6,1087 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netEquCab2,940 netEquCab2,1084 netHg38,940 netHg38,1084 netMm10,940 netMm10,1084 netRn6,943 netRn6,1087 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 snp snp148,40 snp148,103 snp148,172 snp148,396 snp148,869 snp148,884 snp148,936 snp148,952 snp148,1047 snp148,1252 snp148,1290 snp148,1340 snp148,1345 snp148,1368 snp148,1444 snp148,1453 snp148,1495 snp148,1619 snp148,1702 snp148,1733 snp148,1759 snp148,1767 snp148,1943 snp148,2054 snp148,2069 snp148,2114 snp148Mult,50 snp148Mult,72 snp148Mult,193 snp148Mult,417 snp148Mult,890 snp148Mult,905 snp148Mult,957 snp148Mult,973 snp148Mult,1068 snp148Mult,1273 snp148Mult,1311 snp148Mult,1361 snp148Mult,1366 snp148Mult,1389 snp148Mult,1465 snp148Mult,1474 snp148Mult,1516 snp148Mult,1640 snp148Mult,1723 snp148Mult,1754 snp148Mult,1780 snp148Mult,1788 snp148Mult,1964 snp148Mult,2075 snp148Mult,2090 snp148Mult,2135 snp.bcp.gz snp148,2131 snp148Mult,2152 snp148 snp148,2223 snp148Mult,2244 snp_bitfield snp148,1242 snp148Mult,1263 snp_bitfield.bcp.gz snp148,2159 snp148Mult,2180 snpallelefreq.bcp.gz snp148,2132 snp148Mult,2153 snpallelefreq_tgp.bcp.gz snp148,2149 snp148Mult,2170 snps snp148,2 snp148,53 snp148,57 snp148,89 snp148,228 snp148,897 snp148,1085 snp148,1301 snp148,1311 snp148,1315 snp148,1458 snp148,1593 snp148,1612 snp148,1627 snp148,1694 snp148,1897 snp148,1908 snp148Mult,2 snp148Mult,52 snp148Mult,137 snp148Mult,153 snp148Mult,249 snp148Mult,918 snp148Mult,1106 snp148Mult,1322 snp148Mult,1332 snp148Mult,1336 snp148Mult,1479 snp148Mult,1614 snp148Mult,1633 snp148Mult,1648 snp148Mult,1715 snp148Mult,1918 snp148Mult,1929 snpsubsnplink.bcp.gz snp148,2158 snp148Mult,2179 snrna rmsk,192 so chainEquCab2,434 chainHg38,434 chainMm10,434 chainNetEquCab2,437 chainNetHg38,437 chainNetMm10,437 chainNetRn6,440 chainRn6,437 netEquCab2,434 netHg38,434 netMm10,434 netRn6,437 snp148,79 snp148,486 snp148Mult,507 soft-masked rmsk,305 software nestedRepeats,255 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 est,156 est,553 est,569 est,671 intronEst,237 intronEst,634 intronEst,650 intronEst,752 mrna,102 nestedRepeats,207 rmsk,105 rmsk,268 snp148,1312 snp148,1398 snp148,1465 snp148,1510 snp148,1626 snp148,1636 snp148,1655 snp148Mult,1333 snp148Mult,1419 snp148Mult,1486 snp148Mult,1531 snp148Mult,1647 snp148Mult,1657 snp148Mult,1676 transMapEnsemblV5,298 transMapEnsemblV5,308 transMapEstV5,267 transMapEstV5,277 transMapRefSeqV5,267 transMapRefSeqV5,277 transMapRnaV5,267 transMapRnaV5,277 transMapV5,373 transMapV5,383 sometimes simpleRepeat,50 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainEquCab2,772 chainHg38,772 chainMm10,772 chainNetEquCab2,775 chainNetHg38,775 chainNetMm10,775 chainNetRn6,778 chainRn6,775 netEquCab2,772 netHg38,772 netMm10,772 netRn6,775 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 transMapEnsemblV5,153 transMapEnsemblV5,324 transMapEnsemblV5,341 transMapEnsemblV5,405 transMapEnsemblV5,430 transMapEnsemblV5,621 transMapEnsemblV5,635 transMapEstV5,122 transMapEstV5,293 transMapEstV5,310 transMapEstV5,374 transMapEstV5,399 transMapEstV5,590 transMapEstV5,604 transMapRefSeqV5,122 transMapRefSeqV5,293 transMapRefSeqV5,310 transMapRefSeqV5,374 transMapRefSeqV5,399 transMapRefSeqV5,590 transMapRefSeqV5,604 transMapRnaV5,122 transMapRnaV5,293 transMapRnaV5,310 transMapRnaV5,374 transMapRnaV5,399 transMapRnaV5,590 transMapRnaV5,604 transMapV5,228 transMapV5,399 transMapV5,416 transMapV5,480 transMapV5,505 transMapV5,696 transMapV5,710 windowmaskerSdust,33 sources snp148,2022 snp148Mult,2043 transMapEnsemblV5,49 transMapEnsemblV5,67 space est,268 intronEst,349 mrna,214 spaces gold,100 spain geneid,49 sgpGene,58 span chainEquCab2,393 chainHg38,393 chainMm10,393 chainNetEquCab2,396 chainNetHg38,396 chainNetMm10,396 chainNetRn6,399 chainRn6,396 netEquCab2,393 netHg38,393 netMm10,393 netRn6,396 spans snp148,218 snp148,977 snp148,1003 snp148,1162 snp148,1188 snp148Mult,239 snp148Mult,998 snp148Mult,1024 snp148Mult,1183 snp148Mult,1209 specialized simpleRepeat,29 species augustusGene,167 augustusGene,174 augustusGene,182 augustusGene,187 augustusGene,201 augustusGene,230 augustusGene,245 chainEquCab2,116 chainEquCab2,169 chainEquCab2,188 chainEquCab2,891 chainHg38,116 chainHg38,169 chainHg38,188 chainHg38,891 chainMm10,116 chainMm10,169 chainMm10,188 chainMm10,891 chainNetEquCab2,119 chainNetEquCab2,172 chainNetEquCab2,191 chainNetEquCab2,894 chainNetHg38,119 chainNetHg38,172 chainNetHg38,191 chainNetHg38,894 chainNetMm10,119 chainNetMm10,172 chainNetMm10,191 chainNetMm10,894 chainNetRn6,121 chainNetRn6,174 chainNetRn6,193 chainNetRn6,897 chainRn6,118 chainRn6,171 chainRn6,190 chainRn6,894 netEquCab2,116 netEquCab2,169 netEquCab2,188 netEquCab2,891 netHg38,116 netHg38,169 netHg38,188 netHg38,891 netMm10,116 netMm10,169 netMm10,188 netMm10,891 netRn6,118 netRn6,171 netRn6,190 netRn6,894 sgpGene,79 sgpGene,85 transMapEnsemblV5,33 transMapEnsemblV5,270 transMapEstV5,31 transMapEstV5,239 transMapRefSeqV5,31 transMapRefSeqV5,239 transMapRnaV5,31 transMapRnaV5,239 transMapV5,30 transMapV5,79 transMapV5,115 transMapV5,345 species-specific augustusGene,157 specific est,195 gap,34 gold,36 intronEst,276 mrna,141 simpleRepeat,53 specification gap,60 gold,59 splice augustusGene,54 geneid,71 genscan,157 snp148,735 snp148,755 snp148,813 snp148Mult,756 snp148Mult,776 snp148Mult,834 splice-3 snp148,752 snp148Mult,773 splice-5 snp148,772 snp148Mult,793 splice_acceptor_variant snp148,733 snp148,815 snp148Mult,754 snp148Mult,836 splice_donor_variant snp148,753 snp148,816 snp148Mult,774 snp148Mult,837 spliced intronEst,1 intronEst,8 intronEst,59 transMapEnsemblV5,176 transMapEstV5,18 transMapEstV5,145 transMapRefSeqV5,145 transMapRnaV5,145 transMapV5,251 splicing augustusGene,124 genscan,34 genscan,187 intronEst,33 intronEst,94 split chainEquCab2,574 chainHg38,574 chainMm10,574 chainNetEquCab2,577 chainNetHg38,577 chainNetMm10,577 chainNetRn6,580 chainRn6,577 netEquCab2,574 netHg38,574 netMm10,574 netRn6,577 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srcuniq transMapEnsemblV5,422 transMapEstV5,391 transMapRefSeqV5,391 transMapRnaV5,391 transMapV5,497 srprna rmsk,194 st snp148,2252 snp148Mult,2273 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 standard snp148,1526 snp148Mult,1547 stanke augustusGene,104 augustusGene,252 augustusGene,285 augustusGene,287 augustusGene,317 transMapEnsemblV5,755 transMapEstV5,724 transMapRefSeqV5,724 transMapRnaV5,724 transMapV5,830 start augustusGene,59 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 est,561 geneid,73 intronEst,642 transMapEnsemblV5,669 transMapEstV5,638 transMapRefSeqV5,638 transMapRnaV5,638 transMapV5,744 state chainEquCab2,917 chainEquCab2,1020 chainHg38,917 chainHg38,1020 chainMm10,917 chainMm10,1020 chainNetEquCab2,920 chainNetEquCab2,1023 chainNetHg38,920 chainNetHg38,1023 chainNetMm10,920 chainNetMm10,1023 chainNetRn6,923 chainNetRn6,1026 chainRn6,920 chainRn6,1023 netEquCab2,917 netEquCab2,1020 netHg38,917 netHg38,1020 netMm10,917 netMm10,1020 netRn6,920 netRn6,1023 statistical augustusGene,48 status snp148,2125 snp148Mult,2146 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 transMapEnsemblV5,673 transMapEstV5,642 transMapRefSeqV5,642 transMapRnaV5,642 transMapV5,748 stefanie augustusGene,268 step geneid,70 transMapEnsemblV5,306 transMapEstV5,275 transMapRefSeqV5,275 transMapRnaV5,275 transMapV5,381 stevens transMapEnsemblV5,721 transMapEstV5,690 transMapRefSeqV5,690 transMapRnaV5,690 transMapV5,796 stop geneid,75 snp148,591 snp148,651 snp148Mult,612 snp148Mult,672 stop-loss snp148,661 snp148Mult,682 stop_gained snp148,573 snp148,803 snp148Mult,594 snp148Mult,824 stop_lost snp148,638 snp148,805 snp148Mult,659 snp148Mult,826 storage chainEquCab2,974 chainHg38,974 chainMm10,974 chainNetEquCab2,977 chainNetHg38,977 chainNetMm10,977 chainNetRn6,980 chainRn6,977 netEquCab2,974 netHg38,974 netMm10,974 netRn6,977 stored transMapEnsemblV5,542 transMapEstV5,511 transMapRefSeqV5,511 transMapRnaV5,511 transMapV5,617 strand chainEquCab2,246 chainHg38,246 chainMm10,246 chainNetEquCab2,249 chainNetHg38,249 chainNetMm10,249 chainNetRn6,251 chainRn6,248 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 est,75 intronEst,156 nestedRepeats,144 nestedRepeats,155 netEquCab2,246 netHg38,246 netMm10,246 netRn6,248 string snp148,273 snp148Mult,294 stringency transMapV5,120 structure augustusGene,114 geneid,66 geneid,130 structures augustusGene,165 genscan,216 studied snp148,1343 snp148Mult,1364 studies snp148,1285 snp148Mult,1306 study snp148,1664 snp148Mult,1685 studying chainEquCab2,287 chainHg38,287 chainMm10,287 chainNetEquCab2,290 chainNetHg38,290 chainNetMm10,290 chainNetRn6,292 chainRn6,289 netEquCab2,287 netHg38,287 netMm10,287 netRn6,289 submission snp148,311 snp148,415 snp148Mult,332 snp148Mult,436 submissions snp148,324 snp148,410 snp148,1656 snp148Mult,345 snp148Mult,431 snp148Mult,1677 submit refGene,53 submitted est,733 intronEst,817 mrna,450 snp148,395 snp148,402 snp148,1359 snp148,1438 snp148,1457 snp148,1611 snp148,1693 snp148Mult,416 snp148Mult,423 snp148Mult,1380 snp148Mult,1459 snp148Mult,1478 snp148Mult,1632 snp148Mult,1714 transMapEnsemblV5,690 transMapEstV5,659 transMapRefSeqV5,659 transMapRnaV5,659 transMapV5,765 submitter snp148,1261 snp148,1599 snp148,1641 snp148,1645 snp148,2150 snp148Mult,1282 snp148Mult,1620 snp148Mult,1662 snp148Mult,1666 snp148Mult,2171 submitters snp148,1342 snp148,1370 snp148,1634 snp148Mult,1363 snp148Mult,1391 snp148Mult,1655 submodel augustusGene,332 subsections chainEquCab2,638 chainHg38,638 chainMm10,638 chainNetEquCab2,641 chainNetHg38,641 chainNetMm10,641 chainNetRn6,644 chainRn6,641 netEquCab2,638 netHg38,638 netMm10,638 netRn6,641 subsequent transMapEnsemblV5,440 transMapEstV5,409 transMapRefSeqV5,409 transMapRnaV5,409 transMapV5,515 subset est,134 intronEst,215 microsat,54 mrna,80 snp148,42 snp148Mult,25 snp148Mult,69 transMapEnsemblV5,207 transMapEstV5,176 transMapRefSeqV5,176 transMapRnaV5,176 transMapV5,282 subsnp.bcp.gz snp148,2156 snp148Mult,2177 substantial chainEquCab2,165 chainHg38,165 chainMm10,165 chainNetEquCab2,168 chainNetHg38,168 chainNetMm10,168 chainNetRn6,170 chainRn6,167 netEquCab2,165 netHg38,165 netMm10,165 netRn6,167 substitutions snp148,1541 snp148Mult,1562 subtracks chainEquCab2,29 chainEquCab2,36 chainHg38,29 chainHg38,36 chainMm10,29 chainMm10,36 chainNetEquCab2,32 chainNetEquCab2,39 chainNetHg38,32 chainNetHg38,39 chainNetMm10,32 chainNetMm10,39 chainNetRn6,33 chainNetRn6,40 chainRn6,30 chainRn6,37 netEquCab2,29 netEquCab2,36 netHg38,29 netHg38,36 netMm10,29 netMm10,36 netRn6,30 netRn6,37 successful est,591 intronEst,672 such chainEquCab2,852 chainHg38,852 chainMm10,852 chainNetEquCab2,855 chainNetHg38,855 chainNetMm10,855 chainNetRn6,858 chainRn6,855 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netEquCab2,852 netHg38,852 netMm10,852 netRn6,855 snp148,1708 snp148,2166 snp148Mult,1729 snp148Mult,2187 suffix transMapEnsemblV5,399 transMapEstV5,368 transMapRefSeqV5,368 transMapRnaV5,368 transMapV5,474 suggestions refGene,52 sum geneid,101 geneid,135 snp148,879 snp148Mult,900 suppl augustusGene,337 supported gap,93 snp148,1582 snp148Mult,1603 surveyed snp148,318 snp148Mult,339 symp chainEquCab2,1034 chainHg38,1034 chainMm10,1034 chainNetEquCab2,1037 chainNetHg38,1037 chainNetMm10,1037 chainNetRn6,1040 chainRn6,1037 netEquCab2,1034 netHg38,1034 netMm10,1034 netRn6,1037 syn chainEquCab2,517 chainHg38,517 chainMm10,517 chainNetEquCab2,520 chainNetHg38,520 chainNetMm10,520 chainNetRn6,523 chainRn6,520 netEquCab2,517 netHg38,517 netMm10,517 netRn6,520 transMapEnsemblV5,254 transMapEstV5,223 transMapRefSeqV5,223 transMapRnaV5,223 transMapV5,329 synonymous snp148,799 snp148Mult,820 synonymous_variant snp148,507 snp148,800 snp148Mult,528 snp148Mult,821 syntenic chainEquCab2,281 chainEquCab2,859 chainHg38,281 chainHg38,859 chainMm10,281 chainMm10,859 chainNetEquCab2,284 chainNetEquCab2,862 chainNetHg38,284 chainNetHg38,862 chainNetMm10,284 chainNetMm10,862 chainNetRn6,286 chainNetRn6,865 chainRn6,283 chainRn6,862 netEquCab2,281 netEquCab2,859 netHg38,281 netHg38,859 netMm10,281 netMm10,859 netRn6,283 netRn6,862 transMapEnsemblV5,236 transMapEnsemblV5,515 transMapEstV5,205 transMapEstV5,484 transMapRefSeqV5,205 transMapRefSeqV5,484 transMapRnaV5,205 transMapRnaV5,484 transMapV5,311 transMapV5,590 syntenically augustusGene,298 transMapEnsemblV5,77 transMapEnsemblV5,766 transMapEstV5,46 transMapEstV5,735 transMapRefSeqV5,46 transMapRefSeqV5,735 transMapRnaV5,46 transMapRnaV5,735 transMapV5,45 transMapV5,841 synteny chainEquCab2,32 chainHg38,32 chainMm10,32 chainNetEquCab2,35 chainNetHg38,35 chainNetMm10,35 chainNetRn6,36 chainRn6,33 netEquCab2,32 netHg38,32 netMm10,32 netRn6,33 transMapEnsemblV5,275 transMapEstV5,244 transMapRefSeqV5,244 transMapRnaV5,244 transMapV5,350 synteny-filtered transMapV5,83 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainEquCab2,78 chainHg38,78 chainMm10,78 chainNetEquCab2,81 chainNetHg38,81 chainNetMm10,81 chainNetRn6,83 chainRn6,80 netEquCab2,78 netHg38,78 netMm10,78 netRn6,80 transMapEnsemblV5,631 transMapEstV5,600 transMapRefSeqV5,600 transMapRnaV5,600 transMapV5,706 systems chainEquCab2,88 chainHg38,88 chainMm10,88 chainNetEquCab2,91 chainNetHg38,91 chainNetMm10,91 chainNetRn6,93 chainRn6,90 netEquCab2,88 netHg38,88 netMm10,88 netRn6,90 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 refGene,398 xenoRefGene,363 t-123-31-11491 chainHg38,671 chainMm10,671 chainNetHg38,674 chainNetMm10,674 chainNetRn6,677 chainRn6,674 netHg38,671 netMm10,671 netRn6,674 t-128-31-11188 chainEquCab2,671 chainNetEquCab2,674 netEquCab2,671 table augustusGene,226 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 est,220 est,223 est,242 intronEst,301 intronEst,304 intronEst,323 mrna,166 mrna,169 mrna,188 snp148,1243 snp148,2202 snp148Mult,1264 snp148Mult,2223 transMapEnsemblV5,530 transMapEstV5,499 transMapRefSeqV5,499 transMapRnaV5,499 transMapV5,605 windowmaskerSdust,85 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 tablesize chainEquCab2,701 chainHg38,701 chainMm10,701 chainNetEquCab2,704 chainNetHg38,704 chainNetMm10,704 chainNetRn6,707 chainRn6,704 netEquCab2,701 netHg38,701 netMm10,701 netRn6,704 tags est,20 intronEst,22 tail est,502 intronEst,583 taken est,473 intronEst,554 refGene,22 snp148,2147 snp148Mult,2168 xenoRefGene,25 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 snp148,288 snp148,2000 snp148Mult,309 snp148Mult,2021 transMapEnsemblV5,507 transMapEstV5,476 transMapRefSeqV5,476 transMapRnaV5,476 transMapV5,582 target sgpGene,78 sgpGene,98 targeted transMapEnsemblV5,735 transMapEstV5,704 transMapRefSeqV5,704 transMapRnaV5,704 transMapV5,810 task est,162 intronEst,243 mrna,108 tatusova refGene,397 xenoRefGene,362 tblastx sgpGene,71 techniques est,567 intronEst,648 temperature augustusGene,142 template snp148,831 snp148,838 snp148Mult,852 snp148Mult,859 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 term est,169 intronEst,250 mrna,115 snp148,490 snp148,523 snp148,534 snp148,546 snp148,558 snp148,571 snp148,599 snp148,636 snp148,660 snp148,690 snp148,709 snp148,720 snp148,731 snp148,751 snp148,771 snp148Mult,511 snp148Mult,544 snp148Mult,555 snp148Mult,567 snp148Mult,579 snp148Mult,592 snp148Mult,620 snp148Mult,657 snp148Mult,681 snp148Mult,711 snp148Mult,730 snp148Mult,741 snp148Mult,752 snp148Mult,772 snp148Mult,792 terminal rmsk,167 terminator snp148,649 snp148Mult,670 terms est,213 est,259 intronEst,294 intronEst,340 mrna,159 mrna,205 snp148,478 snp148,784 snp148,2109 snp148,2123 snp148Mult,499 snp148Mult,805 snp148Mult,2130 snp148Mult,2144 tested snp148,1082 snp148,1648 snp148Mult,1103 snp148Mult,1669 text est,176 est,216 est,256 intronEst,257 intronEst,297 intronEst,337 mrna,122 mrna,162 mrna,202 snp148,300 snp148Mult,321 tgap chainEquCab2,729 chainHg38,729 chainMm10,729 chainNetEquCab2,732 chainNetHg38,732 chainNetMm10,732 chainNetRn6,735 chainRn6,732 netEquCab2,729 netHg38,729 netMm10,729 netRn6,732 th transMapEnsemblV5,794 transMapEstV5,763 transMapRefSeqV5,763 transMapRnaV5,763 transMapV5,869 than chainEquCab2,83 chainEquCab2,506 chainHg38,83 chainHg38,506 chainMm10,83 chainMm10,506 chainNetEquCab2,86 chainNetEquCab2,509 chainNetHg38,86 chainNetHg38,509 chainNetMm10,86 chainNetMm10,509 chainNetRn6,88 chainNetRn6,512 chainRn6,85 chainRn6,509 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 est,281 est,574 intronEst,362 intronEst,655 mrna,227 nestedRepeats,213 nestedRepeats,271 netEquCab2,83 netEquCab2,506 netHg38,83 netHg38,506 netMm10,83 netMm10,506 netRn6,85 netRn6,509 refGene,267 snp148,387 snp148,468 snp148,611 snp148,959 snp148,1005 snp148,1164 snp148,1859 snp148,1876 snp148Mult,408 snp148Mult,489 snp148Mult,632 snp148Mult,980 snp148Mult,1026 snp148Mult,1185 snp148Mult,1880 snp148Mult,1897 transMapEnsemblV5,224 transMapEnsemblV5,374 transMapEstV5,193 transMapEstV5,343 transMapRefSeqV5,193 transMapRefSeqV5,343 transMapRnaV5,193 transMapRnaV5,343 transMapV5,108 transMapV5,149 transMapV5,299 transMapV5,449 xenoRefGene,23 xenoRefGene,233 thanks augustusGene,249 geneid,144 genscan,171 nestedRepeats,303 rmsk,326 sgpGene,100 that chainEquCab2,20 chainEquCab2,45 chainEquCab2,79 chainEquCab2,139 chainEquCab2,163 chainEquCab2,365 chainEquCab2,392 chainEquCab2,414 chainEquCab2,566 chainEquCab2,822 chainEquCab2,833 chainHg38,20 chainHg38,45 chainHg38,79 chainHg38,139 chainHg38,163 chainHg38,365 chainHg38,392 chainHg38,414 chainHg38,566 chainHg38,822 chainHg38,833 chainMm10,20 chainMm10,45 chainMm10,79 chainMm10,139 chainMm10,163 chainMm10,365 chainMm10,392 chainMm10,414 chainMm10,566 chainMm10,822 chainMm10,833 chainNetEquCab2,23 chainNetEquCab2,48 chainNetEquCab2,82 chainNetEquCab2,142 chainNetEquCab2,166 chainNetEquCab2,368 chainNetEquCab2,395 chainNetEquCab2,417 chainNetEquCab2,569 chainNetEquCab2,825 chainNetEquCab2,836 chainNetHg38,23 chainNetHg38,48 chainNetHg38,82 chainNetHg38,142 chainNetHg38,166 chainNetHg38,368 chainNetHg38,395 chainNetHg38,417 chainNetHg38,569 chainNetHg38,825 chainNetHg38,836 chainNetMm10,23 chainNetMm10,48 chainNetMm10,82 chainNetMm10,142 chainNetMm10,166 chainNetMm10,368 chainNetMm10,395 chainNetMm10,417 chainNetMm10,569 chainNetMm10,825 chainNetMm10,836 chainNetRn6,24 chainNetRn6,49 chainNetRn6,84 chainNetRn6,144 chainNetRn6,168 chainNetRn6,371 chainNetRn6,398 chainNetRn6,420 chainNetRn6,572 chainNetRn6,828 chainNetRn6,839 chainRn6,21 chainRn6,46 chainRn6,81 chainRn6,141 chainRn6,165 chainRn6,368 chainRn6,395 chainRn6,417 chainRn6,569 chainRn6,825 chainRn6,836 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 est,37 est,64 est,118 est,225 est,249 est,297 est,312 est,329 est,353 est,371 est,388 est,403 est,656 est,677 genscan,142 gold,75 gold,145 intronEst,5 intronEst,29 intronEst,49 intronEst,199 intronEst,306 intronEst,330 intronEst,378 intronEst,393 intronEst,410 intronEst,434 intronEst,452 intronEst,469 intronEst,484 intronEst,737 intronEst,758 microsat,15 mrna,45 mrna,64 mrna,171 mrna,195 mrna,243 mrna,258 mrna,275 mrna,299 mrna,317 mrna,334 nestedRepeats,265 nestedRepeats,273 netEquCab2,20 netEquCab2,45 netEquCab2,79 netEquCab2,139 netEquCab2,163 netEquCab2,365 netEquCab2,392 netEquCab2,414 netEquCab2,566 netEquCab2,822 netEquCab2,833 netHg38,20 netHg38,45 netHg38,79 netHg38,139 netHg38,163 netHg38,365 netHg38,392 netHg38,414 netHg38,566 netHg38,822 netHg38,833 netMm10,20 netMm10,45 netMm10,79 netMm10,139 netMm10,163 netMm10,365 netMm10,392 netMm10,414 netMm10,566 netMm10,822 netMm10,833 netRn6,21 netRn6,46 netRn6,81 netRn6,141 netRn6,165 netRn6,368 netRn6,395 netRn6,417 netRn6,569 netRn6,825 netRn6,836 refGene,181 rmsk,42 rmsk,259 snp148,58 snp148,90 snp148,217 snp148,628 snp148,737 snp148,757 snp148,852 snp148,1271 snp148,1278 snp148,1489 snp148,1610 snp148,1613 snp148,1643 snp148,1695 snp148,1709 snp148,1765 snp148,1825 snp148,2027 snp148Mult,9 snp148Mult,53 snp148Mult,133 snp148Mult,238 snp148Mult,649 snp148Mult,758 snp148Mult,778 snp148Mult,873 snp148Mult,1292 snp148Mult,1299 snp148Mult,1510 snp148Mult,1631 snp148Mult,1634 snp148Mult,1664 snp148Mult,1716 snp148Mult,1730 snp148Mult,1786 snp148Mult,1846 snp148Mult,2048 transMapEnsemblV5,118 transMapEnsemblV5,194 transMapEnsemblV5,498 transMapEstV5,87 transMapEstV5,163 transMapEstV5,467 transMapRefSeqV5,87 transMapRefSeqV5,163 transMapRefSeqV5,467 transMapRnaV5,87 transMapRnaV5,163 transMapRnaV5,467 transMapV5,193 transMapV5,269 transMapV5,573 xenoRefGene,147 the augustusGene,21 augustusGene,26 augustusGene,31 augustusGene,39 augustusGene,62 augustusGene,70 augustusGene,82 augustusGene,110 augustusGene,144 augustusGene,166 augustusGene,173 augustusGene,178 augustusGene,186 augustusGene,241 augustusGene,251 augustusGene,256 augustusGene,259 augustusGene,262 augustusGene,273 augustusGene,276 chainEquCab2,18 chainEquCab2,37 chainEquCab2,59 chainEquCab2,71 chainEquCab2,117 chainEquCab2,130 chainEquCab2,147 chainEquCab2,154 chainEquCab2,200 chainEquCab2,203 chainEquCab2,229 chainEquCab2,239 chainEquCab2,244 chainEquCab2,252 chainEquCab2,260 chainEquCab2,264 chainEquCab2,273 chainEquCab2,290 chainEquCab2,299 chainEquCab2,313 chainEquCab2,328 chainEquCab2,334 chainEquCab2,337 chainEquCab2,352 chainEquCab2,358 chainEquCab2,362 chainEquCab2,382 chainEquCab2,388 chainEquCab2,402 chainEquCab2,420 chainEquCab2,437 chainEquCab2,440 chainEquCab2,445 chainEquCab2,458 chainEquCab2,471 chainEquCab2,473 chainEquCab2,480 chainEquCab2,483 chainEquCab2,490 chainEquCab2,496 chainEquCab2,509 chainEquCab2,520 chainEquCab2,524 chainEquCab2,527 chainEquCab2,535 chainEquCab2,539 chainEquCab2,545 chainEquCab2,556 chainEquCab2,559 chainEquCab2,571 chainEquCab2,578 chainEquCab2,580 chainEquCab2,588 chainEquCab2,594 chainEquCab2,603 chainEquCab2,606 chainEquCab2,636 chainEquCab2,641 chainEquCab2,650 chainEquCab2,654 chainEquCab2,661 chainEquCab2,684 chainEquCab2,692 chainEquCab2,762 chainEquCab2,766 chainEquCab2,774 chainEquCab2,778 chainEquCab2,782 chainEquCab2,790 chainEquCab2,835 chainEquCab2,845 chainEquCab2,864 chainEquCab2,867 chainEquCab2,879 chainEquCab2,903 chainEquCab2,945 chainEquCab2,951 chainEquCab2,969 chainEquCab2,976 chainEquCab2,988 chainEquCab2,997 chainEquCab2,1018 chainEquCab2,1058 chainHg38,18 chainHg38,37 chainHg38,59 chainHg38,71 chainHg38,117 chainHg38,130 chainHg38,147 chainHg38,154 chainHg38,200 chainHg38,203 chainHg38,229 chainHg38,239 chainHg38,244 chainHg38,252 chainHg38,260 chainHg38,264 chainHg38,273 chainHg38,290 chainHg38,299 chainHg38,313 chainHg38,328 chainHg38,334 chainHg38,337 chainHg38,352 chainHg38,358 chainHg38,362 chainHg38,382 chainHg38,388 chainHg38,402 chainHg38,420 chainHg38,437 chainHg38,440 chainHg38,445 chainHg38,458 chainHg38,471 chainHg38,473 chainHg38,480 chainHg38,483 chainHg38,490 chainHg38,496 chainHg38,509 chainHg38,520 chainHg38,524 chainHg38,527 chainHg38,535 chainHg38,539 chainHg38,545 chainHg38,556 chainHg38,559 chainHg38,571 chainHg38,578 chainHg38,580 chainHg38,588 chainHg38,594 chainHg38,603 chainHg38,606 chainHg38,636 chainHg38,641 chainHg38,650 chainHg38,654 chainHg38,661 chainHg38,684 chainHg38,692 chainHg38,762 chainHg38,766 chainHg38,774 chainHg38,778 chainHg38,782 chainHg38,790 chainHg38,835 chainHg38,845 chainHg38,864 chainHg38,867 chainHg38,879 chainHg38,903 chainHg38,945 chainHg38,951 chainHg38,969 chainHg38,976 chainHg38,988 chainHg38,997 chainHg38,1018 chainHg38,1058 chainMm10,18 chainMm10,37 chainMm10,59 chainMm10,71 chainMm10,117 chainMm10,130 chainMm10,147 chainMm10,154 chainMm10,200 chainMm10,203 chainMm10,229 chainMm10,239 chainMm10,244 chainMm10,252 chainMm10,260 chainMm10,264 chainMm10,273 chainMm10,290 chainMm10,299 chainMm10,313 chainMm10,328 chainMm10,334 chainMm10,337 chainMm10,352 chainMm10,358 chainMm10,362 chainMm10,382 chainMm10,388 chainMm10,402 chainMm10,420 chainMm10,437 chainMm10,440 chainMm10,445 chainMm10,458 chainMm10,471 chainMm10,473 chainMm10,480 chainMm10,483 chainMm10,490 chainMm10,496 chainMm10,509 chainMm10,520 chainMm10,524 chainMm10,527 chainMm10,535 chainMm10,539 chainMm10,545 chainMm10,556 chainMm10,559 chainMm10,571 chainMm10,578 chainMm10,580 chainMm10,588 chainMm10,594 chainMm10,603 chainMm10,606 chainMm10,636 chainMm10,641 chainMm10,650 chainMm10,654 chainMm10,661 chainMm10,684 chainMm10,692 chainMm10,762 chainMm10,766 chainMm10,774 chainMm10,778 chainMm10,782 chainMm10,790 chainMm10,835 chainMm10,845 chainMm10,864 chainMm10,867 chainMm10,879 chainMm10,903 chainMm10,945 chainMm10,951 chainMm10,969 chainMm10,976 chainMm10,988 chainMm10,997 chainMm10,1018 chainMm10,1058 chainNetEquCab2,21 chainNetEquCab2,40 chainNetEquCab2,62 chainNetEquCab2,74 chainNetEquCab2,120 chainNetEquCab2,133 chainNetEquCab2,150 chainNetEquCab2,157 chainNetEquCab2,203 chainNetEquCab2,206 chainNetEquCab2,232 chainNetEquCab2,242 chainNetEquCab2,247 chainNetEquCab2,255 chainNetEquCab2,263 chainNetEquCab2,267 chainNetEquCab2,276 chainNetEquCab2,293 chainNetEquCab2,302 chainNetEquCab2,316 chainNetEquCab2,331 chainNetEquCab2,337 chainNetEquCab2,340 chainNetEquCab2,355 chainNetEquCab2,361 chainNetEquCab2,365 chainNetEquCab2,385 chainNetEquCab2,391 chainNetEquCab2,405 chainNetEquCab2,423 chainNetEquCab2,440 chainNetEquCab2,443 chainNetEquCab2,448 chainNetEquCab2,461 chainNetEquCab2,474 chainNetEquCab2,476 chainNetEquCab2,483 chainNetEquCab2,486 chainNetEquCab2,493 chainNetEquCab2,499 chainNetEquCab2,512 chainNetEquCab2,523 chainNetEquCab2,527 chainNetEquCab2,530 chainNetEquCab2,538 chainNetEquCab2,542 chainNetEquCab2,548 chainNetEquCab2,559 chainNetEquCab2,562 chainNetEquCab2,574 chainNetEquCab2,581 chainNetEquCab2,583 chainNetEquCab2,591 chainNetEquCab2,597 chainNetEquCab2,606 chainNetEquCab2,609 chainNetEquCab2,639 chainNetEquCab2,644 chainNetEquCab2,653 chainNetEquCab2,657 chainNetEquCab2,664 chainNetEquCab2,687 chainNetEquCab2,695 chainNetEquCab2,765 chainNetEquCab2,769 chainNetEquCab2,777 chainNetEquCab2,781 chainNetEquCab2,785 chainNetEquCab2,793 chainNetEquCab2,838 chainNetEquCab2,848 chainNetEquCab2,867 chainNetEquCab2,870 chainNetEquCab2,882 chainNetEquCab2,906 chainNetEquCab2,948 chainNetEquCab2,954 chainNetEquCab2,972 chainNetEquCab2,979 chainNetEquCab2,991 chainNetEquCab2,1000 chainNetEquCab2,1021 chainNetEquCab2,1061 chainNetHg38,21 chainNetHg38,40 chainNetHg38,62 chainNetHg38,74 chainNetHg38,120 chainNetHg38,133 chainNetHg38,150 chainNetHg38,157 chainNetHg38,203 chainNetHg38,206 chainNetHg38,232 chainNetHg38,242 chainNetHg38,247 chainNetHg38,255 chainNetHg38,263 chainNetHg38,267 chainNetHg38,276 chainNetHg38,293 chainNetHg38,302 chainNetHg38,316 chainNetHg38,331 chainNetHg38,337 chainNetHg38,340 chainNetHg38,355 chainNetHg38,361 chainNetHg38,365 chainNetHg38,385 chainNetHg38,391 chainNetHg38,405 chainNetHg38,423 chainNetHg38,440 chainNetHg38,443 chainNetHg38,448 chainNetHg38,461 chainNetHg38,474 chainNetHg38,476 chainNetHg38,483 chainNetHg38,486 chainNetHg38,493 chainNetHg38,499 chainNetHg38,512 chainNetHg38,523 chainNetHg38,527 chainNetHg38,530 chainNetHg38,538 chainNetHg38,542 chainNetHg38,548 chainNetHg38,559 chainNetHg38,562 chainNetHg38,574 chainNetHg38,581 chainNetHg38,583 chainNetHg38,591 chainNetHg38,597 chainNetHg38,606 chainNetHg38,609 chainNetHg38,639 chainNetHg38,644 chainNetHg38,653 chainNetHg38,657 chainNetHg38,664 chainNetHg38,687 chainNetHg38,695 chainNetHg38,765 chainNetHg38,769 chainNetHg38,777 chainNetHg38,781 chainNetHg38,785 chainNetHg38,793 chainNetHg38,838 chainNetHg38,848 chainNetHg38,867 chainNetHg38,870 chainNetHg38,882 chainNetHg38,906 chainNetHg38,948 chainNetHg38,954 chainNetHg38,972 chainNetHg38,979 chainNetHg38,991 chainNetHg38,1000 chainNetHg38,1021 chainNetHg38,1061 chainNetMm10,21 chainNetMm10,40 chainNetMm10,62 chainNetMm10,74 chainNetMm10,120 chainNetMm10,133 chainNetMm10,150 chainNetMm10,157 chainNetMm10,203 chainNetMm10,206 chainNetMm10,232 chainNetMm10,242 chainNetMm10,247 chainNetMm10,255 chainNetMm10,263 chainNetMm10,267 chainNetMm10,276 chainNetMm10,293 chainNetMm10,302 chainNetMm10,316 chainNetMm10,331 chainNetMm10,337 chainNetMm10,340 chainNetMm10,355 chainNetMm10,361 chainNetMm10,365 chainNetMm10,385 chainNetMm10,391 chainNetMm10,405 chainNetMm10,423 chainNetMm10,440 chainNetMm10,443 chainNetMm10,448 chainNetMm10,461 chainNetMm10,474 chainNetMm10,476 chainNetMm10,483 chainNetMm10,486 chainNetMm10,493 chainNetMm10,499 chainNetMm10,512 chainNetMm10,523 chainNetMm10,527 chainNetMm10,530 chainNetMm10,538 chainNetMm10,542 chainNetMm10,548 chainNetMm10,559 chainNetMm10,562 chainNetMm10,574 chainNetMm10,581 chainNetMm10,583 chainNetMm10,591 chainNetMm10,597 chainNetMm10,606 chainNetMm10,609 chainNetMm10,639 chainNetMm10,644 chainNetMm10,653 chainNetMm10,657 chainNetMm10,664 chainNetMm10,687 chainNetMm10,695 chainNetMm10,765 chainNetMm10,769 chainNetMm10,777 chainNetMm10,781 chainNetMm10,785 chainNetMm10,793 chainNetMm10,838 chainNetMm10,848 chainNetMm10,867 chainNetMm10,870 chainNetMm10,882 chainNetMm10,906 chainNetMm10,948 chainNetMm10,954 chainNetMm10,972 chainNetMm10,979 chainNetMm10,991 chainNetMm10,1000 chainNetMm10,1021 chainNetMm10,1061 chainNetRn6,22 chainNetRn6,41 chainNetRn6,63 chainNetRn6,76 chainNetRn6,122 chainNetRn6,135 chainNetRn6,152 chainNetRn6,159 chainNetRn6,205 chainNetRn6,208 chainNetRn6,234 chainNetRn6,244 chainNetRn6,249 chainNetRn6,257 chainNetRn6,265 chainNetRn6,269 chainNetRn6,278 chainNetRn6,295 chainNetRn6,304 chainNetRn6,319 chainNetRn6,334 chainNetRn6,340 chainNetRn6,343 chainNetRn6,358 chainNetRn6,364 chainNetRn6,368 chainNetRn6,388 chainNetRn6,394 chainNetRn6,408 chainNetRn6,426 chainNetRn6,443 chainNetRn6,446 chainNetRn6,451 chainNetRn6,464 chainNetRn6,477 chainNetRn6,479 chainNetRn6,486 chainNetRn6,489 chainNetRn6,496 chainNetRn6,502 chainNetRn6,515 chainNetRn6,526 chainNetRn6,530 chainNetRn6,533 chainNetRn6,541 chainNetRn6,545 chainNetRn6,551 chainNetRn6,562 chainNetRn6,565 chainNetRn6,577 chainNetRn6,584 chainNetRn6,586 chainNetRn6,594 chainNetRn6,600 chainNetRn6,609 chainNetRn6,612 chainNetRn6,642 chainNetRn6,647 chainNetRn6,656 chainNetRn6,660 chainNetRn6,667 chainNetRn6,690 chainNetRn6,698 chainNetRn6,768 chainNetRn6,772 chainNetRn6,780 chainNetRn6,784 chainNetRn6,788 chainNetRn6,796 chainNetRn6,841 chainNetRn6,851 chainNetRn6,870 chainNetRn6,873 chainNetRn6,885 chainNetRn6,909 chainNetRn6,951 chainNetRn6,957 chainNetRn6,975 chainNetRn6,982 chainNetRn6,994 chainNetRn6,1003 chainNetRn6,1024 chainNetRn6,1064 chainRn6,19 chainRn6,38 chainRn6,60 chainRn6,73 chainRn6,119 chainRn6,132 chainRn6,149 chainRn6,156 chainRn6,202 chainRn6,205 chainRn6,231 chainRn6,241 chainRn6,246 chainRn6,254 chainRn6,262 chainRn6,266 chainRn6,275 chainRn6,292 chainRn6,301 chainRn6,316 chainRn6,331 chainRn6,337 chainRn6,340 chainRn6,355 chainRn6,361 chainRn6,365 chainRn6,385 chainRn6,391 chainRn6,405 chainRn6,423 chainRn6,440 chainRn6,443 chainRn6,448 chainRn6,461 chainRn6,474 chainRn6,476 chainRn6,483 chainRn6,486 chainRn6,493 chainRn6,499 chainRn6,512 chainRn6,523 chainRn6,527 chainRn6,530 chainRn6,538 chainRn6,542 chainRn6,548 chainRn6,559 chainRn6,562 chainRn6,574 chainRn6,581 chainRn6,583 chainRn6,591 chainRn6,597 chainRn6,606 chainRn6,609 chainRn6,639 chainRn6,644 chainRn6,653 chainRn6,657 chainRn6,664 chainRn6,687 chainRn6,695 chainRn6,765 chainRn6,769 chainRn6,777 chainRn6,781 chainRn6,785 chainRn6,793 chainRn6,838 chainRn6,848 chainRn6,867 chainRn6,870 chainRn6,882 chainRn6,906 chainRn6,948 chainRn6,954 chainRn6,972 chainRn6,979 chainRn6,991 chainRn6,1000 chainRn6,1021 chainRn6,1061 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 est,25 est,51 est,62 est,74 est,78 est,81 est,84 est,87 est,96 est,101 est,109 est,124 est,128 est,138 est,150 est,160 est,165 est,175 est,180 est,187 est,198 est,201 est,204 est,209 est,219 est,222 est,228 est,238 est,245 est,254 est,275 est,285 est,317 est,324 est,338 est,347 est,355 est,364 est,373 est,390 est,397 est,406 est,417 est,438 est,461 est,475 est,489 est,500 est,506 est,516 est,520 est,531 est,535 est,542 est,551 est,555 est,565 est,585 est,611 est,617 est,651 est,657 est,689 est,692 est,708 est,717 est,735 est,801 gap,12 gap,15 gap,27 gap,39 gap,42 gap,49 gap,54 gap,56 gap,62 gap,65 gap,78 gap,84 gap,90 gap,110 gap,114 gap,119 gc5BaseBw,13 gc5BaseBw,18 gc5BaseBw,54 gc5BaseBw,58 gc5BaseBw,69 gc5BaseBw,73 geneid,18 geneid,37 geneid,68 geneid,82 geneid,94 geneid,100 geneid,103 geneid,106 geneid,110 geneid,111 geneid,123 geneid,128 geneid,134 geneid,137 geneid,140 genscan,17 genscan,24 genscan,39 genscan,54 genscan,69 genscan,76 genscan,81 genscan,92 genscan,116 genscan,136 genscan,140 genscan,152 genscan,156 genscan,177 gold,13 gold,17 gold,29 gold,41 gold,48 gold,53 gold,55 gold,61 gold,64 gold,73 gold,78 gold,87 gold,104 gold,109 gold,115 gold,129 gold,134 intronEst,27 intronEst,37 intronEst,72 intronEst,95 intronEst,100 intronEst,107 intronEst,124 intronEst,135 intronEst,155 intronEst,159 intronEst,162 intronEst,165 intronEst,168 intronEst,177 intronEst,182 intronEst,190 intronEst,205 intronEst,209 intronEst,219 intronEst,231 intronEst,241 intronEst,246 intronEst,256 intronEst,261 intronEst,268 intronEst,279 intronEst,282 intronEst,285 intronEst,290 intronEst,300 intronEst,303 intronEst,309 intronEst,319 intronEst,326 intronEst,335 intronEst,356 intronEst,366 intronEst,398 intronEst,405 intronEst,419 intronEst,428 intronEst,436 intronEst,445 intronEst,454 intronEst,471 intronEst,478 intronEst,487 intronEst,498 intronEst,519 intronEst,542 intronEst,556 intronEst,570 intronEst,581 intronEst,587 intronEst,597 intronEst,601 intronEst,612 intronEst,616 intronEst,623 intronEst,632 intronEst,636 intronEst,646 intronEst,666 intronEst,692 intronEst,698 intronEst,732 intronEst,738 intronEst,770 intronEst,773 intronEst,789 intronEst,798 intronEst,819 intronEst,885 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,12 mrna,23 mrna,32 mrna,43 mrna,55 mrna,70 mrna,74 mrna,84 mrna,96 mrna,106 mrna,111 mrna,121 mrna,126 mrna,133 mrna,144 mrna,147 mrna,150 mrna,155 mrna,165 mrna,168 mrna,174 mrna,184 mrna,191 mrna,200 mrna,221 mrna,231 mrna,263 mrna,270 mrna,284 mrna,293 mrna,301 mrna,310 mrna,319 mrna,336 mrna,343 mrna,354 mrna,377 mrna,391 mrna,394 mrna,405 mrna,408 mrna,424 mrna,433 mrna,439 mrna,452 mrna,518 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netEquCab2,18 netEquCab2,37 netEquCab2,59 netEquCab2,71 netEquCab2,117 netEquCab2,130 netEquCab2,147 netEquCab2,154 netEquCab2,200 netEquCab2,203 netEquCab2,229 netEquCab2,239 netEquCab2,244 netEquCab2,252 netEquCab2,260 netEquCab2,264 netEquCab2,273 netEquCab2,290 netEquCab2,299 netEquCab2,313 netEquCab2,328 netEquCab2,334 netEquCab2,337 netEquCab2,352 netEquCab2,358 netEquCab2,362 netEquCab2,382 netEquCab2,388 netEquCab2,402 netEquCab2,420 netEquCab2,437 netEquCab2,440 netEquCab2,445 netEquCab2,458 netEquCab2,471 netEquCab2,473 netEquCab2,480 netEquCab2,483 netEquCab2,490 netEquCab2,496 netEquCab2,509 netEquCab2,520 netEquCab2,524 netEquCab2,527 netEquCab2,535 netEquCab2,539 netEquCab2,545 netEquCab2,556 netEquCab2,559 netEquCab2,571 netEquCab2,578 netEquCab2,580 netEquCab2,588 netEquCab2,594 netEquCab2,603 netEquCab2,606 netEquCab2,636 netEquCab2,641 netEquCab2,650 netEquCab2,654 netEquCab2,661 netEquCab2,684 netEquCab2,692 netEquCab2,762 netEquCab2,766 netEquCab2,774 netEquCab2,778 netEquCab2,782 netEquCab2,790 netEquCab2,835 netEquCab2,845 netEquCab2,864 netEquCab2,867 netEquCab2,879 netEquCab2,903 netEquCab2,945 netEquCab2,951 netEquCab2,969 netEquCab2,976 netEquCab2,988 netEquCab2,997 netEquCab2,1018 netEquCab2,1058 netHg38,18 netHg38,37 netHg38,59 netHg38,71 netHg38,117 netHg38,130 netHg38,147 netHg38,154 netHg38,200 netHg38,203 netHg38,229 netHg38,239 netHg38,244 netHg38,252 netHg38,260 netHg38,264 netHg38,273 netHg38,290 netHg38,299 netHg38,313 netHg38,328 netHg38,334 netHg38,337 netHg38,352 netHg38,358 netHg38,362 netHg38,382 netHg38,388 netHg38,402 netHg38,420 netHg38,437 netHg38,440 netHg38,445 netHg38,458 netHg38,471 netHg38,473 netHg38,480 netHg38,483 netHg38,490 netHg38,496 netHg38,509 netHg38,520 netHg38,524 netHg38,527 netHg38,535 netHg38,539 netHg38,545 netHg38,556 netHg38,559 netHg38,571 netHg38,578 netHg38,580 netHg38,588 netHg38,594 netHg38,603 netHg38,606 netHg38,636 netHg38,641 netHg38,650 netHg38,654 netHg38,661 netHg38,684 netHg38,692 netHg38,762 netHg38,766 netHg38,774 netHg38,778 netHg38,782 netHg38,790 netHg38,835 netHg38,845 netHg38,864 netHg38,867 netHg38,879 netHg38,903 netHg38,945 netHg38,951 netHg38,969 netHg38,976 netHg38,988 netHg38,997 netHg38,1018 netHg38,1058 netMm10,18 netMm10,37 netMm10,59 netMm10,71 netMm10,117 netMm10,130 netMm10,147 netMm10,154 netMm10,200 netMm10,203 netMm10,229 netMm10,239 netMm10,244 netMm10,252 netMm10,260 netMm10,264 netMm10,273 netMm10,290 netMm10,299 netMm10,313 netMm10,328 netMm10,334 netMm10,337 netMm10,352 netMm10,358 netMm10,362 netMm10,382 netMm10,388 netMm10,402 netMm10,420 netMm10,437 netMm10,440 netMm10,445 netMm10,458 netMm10,471 netMm10,473 netMm10,480 netMm10,483 netMm10,490 netMm10,496 netMm10,509 netMm10,520 netMm10,524 netMm10,527 netMm10,535 netMm10,539 netMm10,545 netMm10,556 netMm10,559 netMm10,571 netMm10,578 netMm10,580 netMm10,588 netMm10,594 netMm10,603 netMm10,606 netMm10,636 netMm10,641 netMm10,650 netMm10,654 netMm10,661 netMm10,684 netMm10,692 netMm10,762 netMm10,766 netMm10,774 netMm10,778 netMm10,782 netMm10,790 netMm10,835 netMm10,845 netMm10,864 netMm10,867 netMm10,879 netMm10,903 netMm10,945 netMm10,951 netMm10,969 netMm10,976 netMm10,988 netMm10,997 netMm10,1018 netMm10,1058 netRn6,19 netRn6,38 netRn6,60 netRn6,73 netRn6,119 netRn6,132 netRn6,149 netRn6,156 netRn6,202 netRn6,205 netRn6,231 netRn6,241 netRn6,246 netRn6,254 netRn6,262 netRn6,266 netRn6,275 netRn6,292 netRn6,301 netRn6,316 netRn6,331 netRn6,337 netRn6,340 netRn6,355 netRn6,361 netRn6,365 netRn6,385 netRn6,391 netRn6,405 netRn6,423 netRn6,440 netRn6,443 netRn6,448 netRn6,461 netRn6,474 netRn6,476 netRn6,483 netRn6,486 netRn6,493 netRn6,499 netRn6,512 netRn6,523 netRn6,527 netRn6,530 netRn6,538 netRn6,542 netRn6,548 netRn6,559 netRn6,562 netRn6,574 netRn6,581 netRn6,583 netRn6,591 netRn6,597 netRn6,606 netRn6,609 netRn6,639 netRn6,644 netRn6,653 netRn6,657 netRn6,664 netRn6,687 netRn6,695 netRn6,765 netRn6,769 netRn6,777 netRn6,781 netRn6,785 netRn6,793 netRn6,838 netRn6,848 netRn6,867 netRn6,870 netRn6,882 netRn6,906 netRn6,948 netRn6,954 netRn6,972 netRn6,979 netRn6,991 netRn6,1000 netRn6,1021 netRn6,1061 refGene,11 refGene,24 refGene,31 refGene,41 refGene,68 refGene,83 refGene,90 refGene,94 refGene,98 refGene,109 refGene,124 refGene,127 refGene,130 refGene,144 refGene,150 refGene,155 refGene,160 refGene,168 refGene,196 refGene,201 refGene,216 refGene,231 refGene,244 refGene,256 refGene,279 refGene,282 refGene,298 refGene,307 refGene,330 refGene,338 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 sgpGene,22 sgpGene,46 sgpGene,74 sgpGene,77 sgpGene,97 sgpGene,102 simpleRepeat,60 snp148,44 snp148,66 snp148,70 snp148,81 snp148,86 snp148,112 snp148,129 snp148,144 snp148,160 snp148,167 snp148,171 snp148,175 snp148,178 snp148,181 snp148,202 snp148,224 snp148,236 snp148,244 snp148,276 snp148,291 snp148,310 snp148,317 snp148,321 snp148,332 snp148,337 snp148,345 snp148,352 snp148,356 snp148,363 snp148,378 snp148,448 snp148,483 snp148,495 snp148,518 snp148,606 snp148,648 snp148,671 snp148,676 snp148,698 snp148,703 snp148,706 snp148,716 snp148,727 snp148,739 snp148,744 snp148,759 snp148,764 snp148,774 snp148,779 snp148,858 snp148,864 snp148,868 snp148,906 snp148,923 snp148,934 snp148,945 snp148,963 snp148,970 snp148,975 snp148,987 snp148,996 snp148,1001 snp148,1015 snp148,1036 snp148,1040 snp148,1114 snp148,1118 snp148,1126 snp148,1131 snp148,1134 snp148,1139 snp148,1145 snp148,1149 snp148,1160 snp148,1174 snp148,1186 snp148,1198 snp148,1272 snp148,1339 snp148,1367 snp148,1440 snp148,1486 snp148,1560 snp148,1572 snp148,1591 snp148,1663 snp148,1669 snp148,1678 snp148,1710 snp148,1714 snp148,1725 snp148,1729 snp148,1732 snp148,1758 snp148,1766 snp148,1774 snp148,1779 snp148,1782 snp148,1806 snp148,1840 snp148,1843 snp148,1847 snp148,1854 snp148,1871 snp148,1893 snp148,1904 snp148,1910 snp148,1921 snp148,1932 snp148,1936 snp148,1947 snp148,1976 snp148,1999 snp148,2025 snp148,2045 snp148,2061 snp148,2092 snp148,2101 snp148,2140 snp148,2170 snp148,2175 snp148,2179 snp148,2193 snp148,2201 snp148,2213 snp148,2220 snp148,2226 snp148,2266 snp148Mult,27 snp148Mult,61 snp148Mult,81 snp148Mult,98 snp148Mult,110 snp148Mult,120 snp148Mult,141 snp148Mult,151 snp148Mult,165 snp148Mult,181 snp148Mult,188 snp148Mult,192 snp148Mult,196 snp148Mult,199 snp148Mult,202 snp148Mult,223 snp148Mult,245 snp148Mult,257 snp148Mult,265 snp148Mult,297 snp148Mult,312 snp148Mult,331 snp148Mult,338 snp148Mult,342 snp148Mult,353 snp148Mult,358 snp148Mult,366 snp148Mult,373 snp148Mult,377 snp148Mult,384 snp148Mult,399 snp148Mult,469 snp148Mult,504 snp148Mult,516 snp148Mult,539 snp148Mult,627 snp148Mult,669 snp148Mult,692 snp148Mult,697 snp148Mult,719 snp148Mult,724 snp148Mult,727 snp148Mult,737 snp148Mult,748 snp148Mult,760 snp148Mult,765 snp148Mult,780 snp148Mult,785 snp148Mult,795 snp148Mult,800 snp148Mult,879 snp148Mult,885 snp148Mult,889 snp148Mult,927 snp148Mult,944 snp148Mult,955 snp148Mult,966 snp148Mult,984 snp148Mult,991 snp148Mult,996 snp148Mult,1008 snp148Mult,1017 snp148Mult,1022 snp148Mult,1036 snp148Mult,1057 snp148Mult,1061 snp148Mult,1135 snp148Mult,1139 snp148Mult,1147 snp148Mult,1152 snp148Mult,1155 snp148Mult,1160 snp148Mult,1166 snp148Mult,1170 snp148Mult,1181 snp148Mult,1195 snp148Mult,1207 snp148Mult,1219 snp148Mult,1293 snp148Mult,1360 snp148Mult,1388 snp148Mult,1461 snp148Mult,1507 snp148Mult,1581 snp148Mult,1593 snp148Mult,1612 snp148Mult,1684 snp148Mult,1690 snp148Mult,1699 snp148Mult,1731 snp148Mult,1735 snp148Mult,1746 snp148Mult,1750 snp148Mult,1753 snp148Mult,1779 snp148Mult,1787 snp148Mult,1795 snp148Mult,1800 snp148Mult,1803 snp148Mult,1827 snp148Mult,1861 snp148Mult,1864 snp148Mult,1868 snp148Mult,1875 snp148Mult,1892 snp148Mult,1914 snp148Mult,1925 snp148Mult,1931 snp148Mult,1942 snp148Mult,1953 snp148Mult,1957 snp148Mult,1968 snp148Mult,1997 snp148Mult,2020 snp148Mult,2046 snp148Mult,2066 snp148Mult,2082 snp148Mult,2113 snp148Mult,2122 snp148Mult,2161 snp148Mult,2191 snp148Mult,2196 snp148Mult,2200 snp148Mult,2214 snp148Mult,2222 snp148Mult,2234 snp148Mult,2241 snp148Mult,2247 snp148Mult,2287 transMapEnsemblV5,25 transMapEnsemblV5,35 transMapEnsemblV5,72 transMapEnsemblV5,87 transMapEnsemblV5,99 transMapEnsemblV5,120 transMapEnsemblV5,127 transMapEnsemblV5,162 transMapEnsemblV5,179 transMapEnsemblV5,202 transMapEnsemblV5,209 transMapEnsemblV5,252 transMapEnsemblV5,256 transMapEnsemblV5,260 transMapEnsemblV5,272 transMapEnsemblV5,278 transMapEnsemblV5,295 transMapEnsemblV5,303 transMapEnsemblV5,310 transMapEnsemblV5,312 transMapEnsemblV5,323 transMapEnsemblV5,328 transMapEnsemblV5,332 transMapEnsemblV5,340 transMapEnsemblV5,344 transMapEnsemblV5,346 transMapEnsemblV5,377 transMapEnsemblV5,404 transMapEnsemblV5,414 transMapEnsemblV5,417 transMapEnsemblV5,439 transMapEnsemblV5,448 transMapEnsemblV5,461 transMapEnsemblV5,471 transMapEnsemblV5,483 transMapEnsemblV5,504 transMapEnsemblV5,518 transMapEnsemblV5,529 transMapEnsemblV5,533 transMapEnsemblV5,539 transMapEnsemblV5,578 transMapEnsemblV5,586 transMapEnsemblV5,604 transMapEnsemblV5,620 transMapEnsemblV5,643 transMapEnsemblV5,692 transMapEnsemblV5,704 transMapEnsemblV5,806 transMapEstV5,23 transMapEstV5,33 transMapEstV5,41 transMapEstV5,56 transMapEstV5,68 transMapEstV5,89 transMapEstV5,96 transMapEstV5,131 transMapEstV5,148 transMapEstV5,171 transMapEstV5,178 transMapEstV5,221 transMapEstV5,225 transMapEstV5,229 transMapEstV5,241 transMapEstV5,247 transMapEstV5,264 transMapEstV5,272 transMapEstV5,279 transMapEstV5,281 transMapEstV5,292 transMapEstV5,297 transMapEstV5,301 transMapEstV5,309 transMapEstV5,313 transMapEstV5,315 transMapEstV5,346 transMapEstV5,373 transMapEstV5,383 transMapEstV5,386 transMapEstV5,408 transMapEstV5,417 transMapEstV5,430 transMapEstV5,440 transMapEstV5,452 transMapEstV5,473 transMapEstV5,487 transMapEstV5,498 transMapEstV5,502 transMapEstV5,508 transMapEstV5,547 transMapEstV5,555 transMapEstV5,573 transMapEstV5,589 transMapEstV5,612 transMapEstV5,661 transMapEstV5,673 transMapEstV5,775 transMapRefSeqV5,23 transMapRefSeqV5,33 transMapRefSeqV5,41 transMapRefSeqV5,56 transMapRefSeqV5,68 transMapRefSeqV5,89 transMapRefSeqV5,96 transMapRefSeqV5,131 transMapRefSeqV5,148 transMapRefSeqV5,171 transMapRefSeqV5,178 transMapRefSeqV5,221 transMapRefSeqV5,225 transMapRefSeqV5,229 transMapRefSeqV5,241 transMapRefSeqV5,247 transMapRefSeqV5,264 transMapRefSeqV5,272 transMapRefSeqV5,279 transMapRefSeqV5,281 transMapRefSeqV5,292 transMapRefSeqV5,297 transMapRefSeqV5,301 transMapRefSeqV5,309 transMapRefSeqV5,313 transMapRefSeqV5,315 transMapRefSeqV5,346 transMapRefSeqV5,373 transMapRefSeqV5,383 transMapRefSeqV5,386 transMapRefSeqV5,408 transMapRefSeqV5,417 transMapRefSeqV5,430 transMapRefSeqV5,440 transMapRefSeqV5,452 transMapRefSeqV5,473 transMapRefSeqV5,487 transMapRefSeqV5,498 transMapRefSeqV5,502 transMapRefSeqV5,508 transMapRefSeqV5,547 transMapRefSeqV5,555 transMapRefSeqV5,573 transMapRefSeqV5,589 transMapRefSeqV5,612 transMapRefSeqV5,661 transMapRefSeqV5,673 transMapRefSeqV5,775 transMapRnaV5,23 transMapRnaV5,33 transMapRnaV5,41 transMapRnaV5,56 transMapRnaV5,68 transMapRnaV5,89 transMapRnaV5,96 transMapRnaV5,131 transMapRnaV5,148 transMapRnaV5,171 transMapRnaV5,178 transMapRnaV5,221 transMapRnaV5,225 transMapRnaV5,229 transMapRnaV5,241 transMapRnaV5,247 transMapRnaV5,264 transMapRnaV5,272 transMapRnaV5,279 transMapRnaV5,281 transMapRnaV5,292 transMapRnaV5,297 transMapRnaV5,301 transMapRnaV5,309 transMapRnaV5,313 transMapRnaV5,315 transMapRnaV5,346 transMapRnaV5,373 transMapRnaV5,383 transMapRnaV5,386 transMapRnaV5,408 transMapRnaV5,417 transMapRnaV5,430 transMapRnaV5,440 transMapRnaV5,452 transMapRnaV5,473 transMapRnaV5,487 transMapRnaV5,498 transMapRnaV5,502 transMapRnaV5,508 transMapRnaV5,547 transMapRnaV5,555 transMapRnaV5,573 transMapRnaV5,589 transMapRnaV5,612 transMapRnaV5,661 transMapRnaV5,673 transMapRnaV5,775 transMapV5,22 transMapV5,32 transMapV5,40 transMapV5,57 transMapV5,92 transMapV5,99 transMapV5,104 transMapV5,122 transMapV5,127 transMapV5,133 transMapV5,137 transMapV5,174 transMapV5,195 transMapV5,202 transMapV5,237 transMapV5,254 transMapV5,277 transMapV5,284 transMapV5,327 transMapV5,331 transMapV5,335 transMapV5,347 transMapV5,353 transMapV5,370 transMapV5,378 transMapV5,385 transMapV5,387 transMapV5,398 transMapV5,403 transMapV5,407 transMapV5,415 transMapV5,419 transMapV5,421 transMapV5,452 transMapV5,479 transMapV5,489 transMapV5,492 transMapV5,514 transMapV5,523 transMapV5,536 transMapV5,546 transMapV5,558 transMapV5,579 transMapV5,593 transMapV5,604 transMapV5,608 transMapV5,614 transMapV5,653 transMapV5,661 transMapV5,679 transMapV5,695 transMapV5,718 transMapV5,767 transMapV5,779 transMapV5,881 ucscToINSDC,27 ucscToINSDC,34 ucscToINSDC,39 ucscToINSDC,44 ucscToRefSeq,22 ucscToRefSeq,28 ucscToRefSeq,33 ucscToRefSeq,38 windowmaskerSdust,22 windowmaskerSdust,28 windowmaskerSdust,32 windowmaskerSdust,36 windowmaskerSdust,42 windowmaskerSdust,55 windowmaskerSdust,74 windowmaskerSdust,81 xenoRefGene,27 xenoRefGene,34 xenoRefGene,49 xenoRefGene,56 xenoRefGene,60 xenoRefGene,64 xenoRefGene,75 xenoRefGene,90 xenoRefGene,93 xenoRefGene,96 xenoRefGene,110 xenoRefGene,116 xenoRefGene,121 xenoRefGene,126 xenoRefGene,134 xenoRefGene,162 xenoRefGene,167 xenoRefGene,182 xenoRefGene,197 xenoRefGene,210 xenoRefGene,217 xenoRefGene,222 xenoRefGene,245 xenoRefGene,248 xenoRefGene,264 xenoRefGene,273 xenoRefGene,296 their nestedRepeats,190 snp148,1900 snp148Mult,1921 them chainEquCab2,797 chainHg38,797 chainMm10,797 chainNetEquCab2,800 chainNetHg38,800 chainNetMm10,800 chainNetRn6,803 chainRn6,800 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netEquCab2,797 netHg38,797 netMm10,797 netRn6,800 rmsk,318 snp148,862 snp148Mult,883 then chainEquCab2,647 chainEquCab2,786 chainEquCab2,871 chainHg38,647 chainHg38,786 chainHg38,871 chainMm10,647 chainMm10,786 chainMm10,871 chainNetEquCab2,650 chainNetEquCab2,789 chainNetEquCab2,874 chainNetHg38,650 chainNetHg38,789 chainNetHg38,874 chainNetMm10,650 chainNetMm10,789 chainNetMm10,874 chainNetRn6,653 chainNetRn6,792 chainNetRn6,877 chainRn6,650 chainRn6,789 chainRn6,874 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 netEquCab2,647 netEquCab2,786 netEquCab2,871 netHg38,647 netHg38,786 netHg38,871 netMm10,647 netMm10,786 netMm10,871 netRn6,650 netRn6,789 netRn6,874 transMapV5,130 there cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 est,620 intronEst,701 snp148,120 snp148,512 snp148,1229 snp148Mult,89 snp148Mult,533 snp148Mult,1250 transMapEnsemblV5,451 transMapEstV5,420 transMapRefSeqV5,420 transMapRnaV5,420 transMapV5,526 therefore gold,123 these augustusGene,96 augustusGene,191 chainEquCab2,52 chainEquCab2,100 chainEquCab2,407 chainEquCab2,659 chainHg38,52 chainHg38,100 chainHg38,407 chainHg38,659 chainMm10,52 chainMm10,100 chainMm10,407 chainMm10,659 chainNetEquCab2,55 chainNetEquCab2,103 chainNetEquCab2,410 chainNetEquCab2,662 chainNetHg38,55 chainNetHg38,103 chainNetHg38,410 chainNetHg38,662 chainNetMm10,55 chainNetMm10,103 chainNetMm10,410 chainNetMm10,662 chainNetRn6,56 chainNetRn6,105 chainNetRn6,413 chainNetRn6,665 chainRn6,53 chainRn6,102 chainRn6,410 chainRn6,662 est,588 geneid,153 intronEst,669 microsat,24 nestedRepeats,262 nestedRepeats,266 netEquCab2,52 netEquCab2,100 netEquCab2,407 netEquCab2,659 netHg38,52 netHg38,100 netHg38,407 netHg38,659 netMm10,52 netMm10,100 netMm10,407 netMm10,659 netRn6,53 netRn6,102 netRn6,410 netRn6,662 rmsk,235 sgpGene,113 simpleRepeat,33 snp148,477 snp148,1314 snp148,1383 snp148,1601 snp148,2117 snp148Mult,135 snp148Mult,498 snp148Mult,1335 snp148Mult,1404 snp148Mult,1622 snp148Mult,2138 transMapEnsemblV5,458 transMapEnsemblV5,467 transMapEnsemblV5,522 transMapEnsemblV5,583 transMapEstV5,427 transMapEstV5,436 transMapEstV5,491 transMapEstV5,552 transMapRefSeqV5,427 transMapRefSeqV5,436 transMapRefSeqV5,491 transMapRefSeqV5,552 transMapRnaV5,427 transMapRnaV5,436 transMapRnaV5,491 transMapRnaV5,552 transMapV5,13 transMapV5,533 transMapV5,542 transMapV5,597 transMapV5,658 thesis chainEquCab2,1017 chainHg38,1017 chainMm10,1017 chainNetEquCab2,1020 chainNetHg38,1020 chainNetMm10,1020 chainNetRn6,1023 chainRn6,1020 netEquCab2,1017 netHg38,1017 netMm10,1017 netRn6,1020 they chainEquCab2,324 chainHg38,324 chainMm10,324 chainNetEquCab2,327 chainNetHg38,327 chainNetMm10,327 chainNetRn6,330 chainRn6,327 netEquCab2,324 netHg38,324 netMm10,324 netRn6,327 snp148,1956 snp148Mult,146 snp148Mult,1977 thibaud-nissen refGene,359 xenoRefGene,324 thick chainEquCab2,43 chainHg38,43 chainMm10,43 chainNetEquCab2,46 chainNetHg38,46 chainNetMm10,46 chainNetRn6,47 chainRn6,44 netEquCab2,43 netHg38,43 netMm10,43 netRn6,44 third-party snp148,1333 snp148Mult,1354 this augustusGene,14 augustusGene,107 augustusGene,225 chainEquCab2,13 chainEquCab2,170 chainEquCab2,295 chainEquCab2,394 chainEquCab2,690 chainEquCab2,812 chainHg38,13 chainHg38,170 chainHg38,295 chainHg38,394 chainHg38,690 chainHg38,812 chainMm10,13 chainMm10,170 chainMm10,295 chainMm10,394 chainMm10,690 chainMm10,812 chainNetEquCab2,16 chainNetEquCab2,173 chainNetEquCab2,298 chainNetEquCab2,397 chainNetEquCab2,693 chainNetEquCab2,815 chainNetHg38,16 chainNetHg38,173 chainNetHg38,298 chainNetHg38,397 chainNetHg38,693 chainNetHg38,815 chainNetMm10,16 chainNetMm10,173 chainNetMm10,298 chainNetMm10,397 chainNetMm10,693 chainNetMm10,815 chainNetRn6,17 chainNetRn6,175 chainNetRn6,300 chainNetRn6,400 chainNetRn6,696 chainNetRn6,818 chainRn6,14 chainRn6,172 chainRn6,297 chainRn6,397 chainRn6,693 chainRn6,815 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 est,12 est,48 est,113 est,140 est,376 est,413 est,593 est,629 est,642 est,723 gap,9 gap,37 gap,45 gap,75 gap,116 gc5BaseBw,39 gc5BaseBw,78 geneid,12 genscan,12 genscan,66 genscan,129 gold,10 gold,39 gold,44 gold,70 gold,140 intronEst,14 intronEst,132 intronEst,194 intronEst,221 intronEst,457 intronEst,494 intronEst,674 intronEst,710 intronEst,723 intronEst,804 intronEst,807 microsat,11 microsat,50 microsat,99 mrna,29 mrna,59 mrna,86 mrna,322 mrna,350 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netEquCab2,13 netEquCab2,170 netEquCab2,295 netEquCab2,394 netEquCab2,690 netEquCab2,812 netHg38,13 netHg38,170 netHg38,295 netHg38,394 netHg38,690 netHg38,812 netMm10,13 netMm10,170 netMm10,295 netMm10,394 netMm10,690 netMm10,812 netRn6,14 netRn6,172 netRn6,297 netRn6,397 netRn6,693 netRn6,815 refGene,34 refGene,80 refGene,118 refGene,173 refGene,212 refGene,248 refGene,313 rmsk,10 rmsk,51 rmsk,143 rmsk,344 sgpGene,16 simpleRepeat,12 simpleRepeat,31 snp148,13 snp148,47 snp148,75 snp148,428 snp148,823 snp148,883 snp148,902 snp148,951 snp148,1046 snp148,1080 snp148,1266 snp148,1344 snp148,1451 snp148,1494 snp148,1617 snp148,1706 snp148,1738 snp148,2029 snp148Mult,19 snp148Mult,68 snp148Mult,115 snp148Mult,449 snp148Mult,844 snp148Mult,904 snp148Mult,923 snp148Mult,972 snp148Mult,1067 snp148Mult,1101 snp148Mult,1287 snp148Mult,1365 snp148Mult,1472 snp148Mult,1515 snp148Mult,1638 snp148Mult,1727 snp148Mult,1759 snp148Mult,2050 transMapEnsemblV5,16 transMapEnsemblV5,96 transMapEnsemblV5,106 transMapEnsemblV5,134 transMapEnsemblV5,287 transMapEnsemblV5,675 transMapEstV5,14 transMapEstV5,65 transMapEstV5,75 transMapEstV5,103 transMapEstV5,256 transMapEstV5,644 transMapRefSeqV5,15 transMapRefSeqV5,65 transMapRefSeqV5,75 transMapRefSeqV5,103 transMapRefSeqV5,256 transMapRefSeqV5,644 transMapRnaV5,15 transMapRnaV5,65 transMapRnaV5,75 transMapRnaV5,103 transMapRnaV5,256 transMapRnaV5,644 transMapV5,171 transMapV5,181 transMapV5,209 transMapV5,362 transMapV5,750 ucscToINSDC,15 ucscToINSDC,47 ucscToRefSeq,10 ucscToRefSeq,41 windowmaskerSdust,13 windowmaskerSdust,49 windowmaskerSdust,87 xenoRefGene,12 xenoRefGene,37 xenoRefGene,46 xenoRefGene,84 xenoRefGene,139 xenoRefGene,178 xenoRefGene,214 xenoRefGene,279 those est,369 est,402 intronEst,450 intronEst,483 microsat,62 mrna,315 nestedRepeats,272 refGene,261 snp148,125 snp148,132 snp148Mult,94 snp148Mult,101 xenoRefGene,227 thousands chainEquCab2,250 chainHg38,250 chainMm10,250 chainNetEquCab2,253 chainNetHg38,253 chainNetMm10,253 chainNetRn6,255 chainRn6,252 netEquCab2,250 netHg38,250 netMm10,250 netRn6,252 three snp148,688 snp148,1220 snp148Mult,709 snp148Mult,1241 through gap,109 nestedRepeats,97 refGene,123 rmsk,309 transMapEnsemblV5,528 transMapEstV5,497 transMapRefSeqV5,497 transMapRnaV5,497 transMapV5,603 xenoRefGene,89 tick snp148,152 snp148,190 snp148Mult,173 snp148Mult,211 time chainEquCab2,795 chainHg38,795 chainMm10,795 chainNetEquCab2,798 chainNetHg38,798 chainNetMm10,798 chainNetRn6,801 chainRn6,798 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netEquCab2,795 netHg38,795 netMm10,795 netRn6,798 times snp148,1677 snp148Mult,1698 tissue est,205 est,240 est,255 intronEst,286 intronEst,321 intronEst,336 mrna,151 mrna,186 mrna,201 tissues est,248 intronEst,329 mrna,194 to augustusGene,116 augustusGene,171 augustusGene,250 augustusGene,302 chainEquCab2,23 chainEquCab2,70 chainEquCab2,143 chainEquCab2,211 chainEquCab2,223 chainEquCab2,315 chainEquCab2,326 chainEquCab2,331 chainEquCab2,343 chainEquCab2,349 chainEquCab2,372 chainEquCab2,453 chainEquCab2,467 chainEquCab2,551 chainEquCab2,652 chainEquCab2,788 chainEquCab2,800 chainEquCab2,840 chainEquCab2,863 chainEquCab2,873 chainHg38,23 chainHg38,70 chainHg38,143 chainHg38,211 chainHg38,223 chainHg38,315 chainHg38,326 chainHg38,331 chainHg38,343 chainHg38,349 chainHg38,372 chainHg38,453 chainHg38,467 chainHg38,551 chainHg38,652 chainHg38,788 chainHg38,800 chainHg38,840 chainHg38,863 chainHg38,873 chainMm10,23 chainMm10,70 chainMm10,143 chainMm10,211 chainMm10,223 chainMm10,315 chainMm10,326 chainMm10,331 chainMm10,343 chainMm10,349 chainMm10,372 chainMm10,453 chainMm10,467 chainMm10,551 chainMm10,652 chainMm10,788 chainMm10,800 chainMm10,840 chainMm10,863 chainMm10,873 chainNetEquCab2,26 chainNetEquCab2,73 chainNetEquCab2,146 chainNetEquCab2,214 chainNetEquCab2,226 chainNetEquCab2,318 chainNetEquCab2,329 chainNetEquCab2,334 chainNetEquCab2,346 chainNetEquCab2,352 chainNetEquCab2,375 chainNetEquCab2,456 chainNetEquCab2,470 chainNetEquCab2,554 chainNetEquCab2,655 chainNetEquCab2,791 chainNetEquCab2,803 chainNetEquCab2,843 chainNetEquCab2,866 chainNetEquCab2,876 chainNetHg38,26 chainNetHg38,73 chainNetHg38,146 chainNetHg38,214 chainNetHg38,226 chainNetHg38,318 chainNetHg38,329 chainNetHg38,334 chainNetHg38,346 chainNetHg38,352 chainNetHg38,375 chainNetHg38,456 chainNetHg38,470 chainNetHg38,554 chainNetHg38,655 chainNetHg38,791 chainNetHg38,803 chainNetHg38,843 chainNetHg38,866 chainNetHg38,876 chainNetMm10,26 chainNetMm10,73 chainNetMm10,146 chainNetMm10,214 chainNetMm10,226 chainNetMm10,318 chainNetMm10,329 chainNetMm10,334 chainNetMm10,346 chainNetMm10,352 chainNetMm10,375 chainNetMm10,456 chainNetMm10,470 chainNetMm10,554 chainNetMm10,655 chainNetMm10,791 chainNetMm10,803 chainNetMm10,843 chainNetMm10,866 chainNetMm10,876 chainNetRn6,27 chainNetRn6,75 chainNetRn6,148 chainNetRn6,216 chainNetRn6,228 chainNetRn6,321 chainNetRn6,332 chainNetRn6,337 chainNetRn6,349 chainNetRn6,355 chainNetRn6,378 chainNetRn6,459 chainNetRn6,473 chainNetRn6,557 chainNetRn6,658 chainNetRn6,794 chainNetRn6,806 chainNetRn6,846 chainNetRn6,869 chainNetRn6,879 chainRn6,24 chainRn6,72 chainRn6,145 chainRn6,213 chainRn6,225 chainRn6,318 chainRn6,329 chainRn6,334 chainRn6,346 chainRn6,352 chainRn6,375 chainRn6,456 chainRn6,470 chainRn6,554 chainRn6,655 chainRn6,791 chainRn6,803 chainRn6,843 chainRn6,866 chainRn6,876 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 est,95 est,122 est,159 est,163 est,178 est,185 est,189 est,207 est,227 est,234 est,333 est,382 est,392 est,416 est,437 est,446 est,515 est,580 est,640 est,734 gc5BaseBw,49 geneid,55 geneid,145 geneid,165 genscan,96 genscan,106 genscan,115 genscan,146 genscan,172 gold,132 intronEst,56 intronEst,176 intronEst,203 intronEst,240 intronEst,244 intronEst,259 intronEst,266 intronEst,270 intronEst,288 intronEst,308 intronEst,315 intronEst,414 intronEst,463 intronEst,473 intronEst,497 intronEst,518 intronEst,527 intronEst,596 intronEst,661 intronEst,721 intronEst,818 microsat,18 microsat,38 microsat,121 mrna,68 mrna,105 mrna,109 mrna,124 mrna,131 mrna,135 mrna,153 mrna,173 mrna,180 mrna,279 mrna,328 mrna,338 mrna,353 mrna,376 mrna,451 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netEquCab2,23 netEquCab2,70 netEquCab2,143 netEquCab2,211 netEquCab2,223 netEquCab2,315 netEquCab2,326 netEquCab2,331 netEquCab2,343 netEquCab2,349 netEquCab2,372 netEquCab2,453 netEquCab2,467 netEquCab2,551 netEquCab2,652 netEquCab2,788 netEquCab2,800 netEquCab2,840 netEquCab2,863 netEquCab2,873 netHg38,23 netHg38,70 netHg38,143 netHg38,211 netHg38,223 netHg38,315 netHg38,326 netHg38,331 netHg38,343 netHg38,349 netHg38,372 netHg38,453 netHg38,467 netHg38,551 netHg38,652 netHg38,788 netHg38,800 netHg38,840 netHg38,863 netHg38,873 netMm10,23 netMm10,70 netMm10,143 netMm10,211 netMm10,223 netMm10,315 netMm10,326 netMm10,331 netMm10,343 netMm10,349 netMm10,372 netMm10,453 netMm10,467 netMm10,551 netMm10,652 netMm10,788 netMm10,800 netMm10,840 netMm10,863 netMm10,873 netRn6,24 netRn6,72 netRn6,145 netRn6,213 netRn6,225 netRn6,318 netRn6,329 netRn6,334 netRn6,346 netRn6,352 netRn6,375 netRn6,456 netRn6,470 netRn6,554 netRn6,655 netRn6,791 netRn6,803 netRn6,843 netRn6,866 netRn6,876 refGene,50 refGene,148 refGene,184 refGene,191 refGene,215 refGene,241 rmsk,147 rmsk,315 rmsk,327 rmsk,342 sgpGene,59 sgpGene,89 sgpGene,101 simpleRepeat,81 snp148,62 snp148,92 snp148,108 snp148,174 snp148,239 snp148,351 snp148,362 snp148,376 snp148,491 snp148,517 snp148,594 snp148,821 snp148,880 snp148,901 snp148,944 snp148,957 snp148,986 snp148,1014 snp148,1027 snp148,1173 snp148,1197 snp148,1322 snp148,1391 snp148,1585 snp148,1597 snp148,1657 snp148,1720 snp148,1749 snp148,1772 snp148,1798 snp148,1822 snp148,1846 snp148,1867 snp148,1884 snp148,1903 snp148,1920 snp148,1935 snp148,2232 snp148Mult,11 snp148Mult,57 snp148Mult,77 snp148Mult,138 snp148Mult,195 snp148Mult,260 snp148Mult,372 snp148Mult,383 snp148Mult,397 snp148Mult,512 snp148Mult,538 snp148Mult,615 snp148Mult,842 snp148Mult,901 snp148Mult,922 snp148Mult,965 snp148Mult,978 snp148Mult,1007 snp148Mult,1035 snp148Mult,1048 snp148Mult,1194 snp148Mult,1218 snp148Mult,1343 snp148Mult,1412 snp148Mult,1606 snp148Mult,1618 snp148Mult,1678 snp148Mult,1741 snp148Mult,1770 snp148Mult,1793 snp148Mult,1819 snp148Mult,1843 snp148Mult,1867 snp148Mult,1888 snp148Mult,1905 snp148Mult,1924 snp148Mult,1941 snp148Mult,1956 snp148Mult,2253 transMapEnsemblV5,112 transMapEnsemblV5,122 transMapEnsemblV5,178 transMapEnsemblV5,201 transMapEnsemblV5,259 transMapEnsemblV5,292 transMapEnsemblV5,300 transMapEnsemblV5,317 transMapEnsemblV5,331 transMapEnsemblV5,343 transMapEnsemblV5,382 transMapEnsemblV5,427 transMapEnsemblV5,437 transMapEnsemblV5,470 transMapEnsemblV5,476 transMapEnsemblV5,489 transMapEnsemblV5,649 transMapEnsemblV5,691 transMapEnsemblV5,770 transMapEstV5,81 transMapEstV5,91 transMapEstV5,147 transMapEstV5,170 transMapEstV5,228 transMapEstV5,261 transMapEstV5,269 transMapEstV5,286 transMapEstV5,300 transMapEstV5,312 transMapEstV5,351 transMapEstV5,396 transMapEstV5,406 transMapEstV5,439 transMapEstV5,445 transMapEstV5,458 transMapEstV5,618 transMapEstV5,660 transMapEstV5,739 transMapRefSeqV5,81 transMapRefSeqV5,91 transMapRefSeqV5,147 transMapRefSeqV5,170 transMapRefSeqV5,228 transMapRefSeqV5,261 transMapRefSeqV5,269 transMapRefSeqV5,286 transMapRefSeqV5,300 transMapRefSeqV5,312 transMapRefSeqV5,351 transMapRefSeqV5,396 transMapRefSeqV5,406 transMapRefSeqV5,439 transMapRefSeqV5,445 transMapRefSeqV5,458 transMapRefSeqV5,618 transMapRefSeqV5,660 transMapRefSeqV5,739 transMapRnaV5,81 transMapRnaV5,91 transMapRnaV5,147 transMapRnaV5,170 transMapRnaV5,228 transMapRnaV5,261 transMapRnaV5,269 transMapRnaV5,286 transMapRnaV5,300 transMapRnaV5,312 transMapRnaV5,351 transMapRnaV5,396 transMapRnaV5,406 transMapRnaV5,439 transMapRnaV5,445 transMapRnaV5,458 transMapRnaV5,618 transMapRnaV5,660 transMapRnaV5,739 transMapV5,80 transMapV5,90 transMapV5,121 transMapV5,132 transMapV5,155 transMapV5,187 transMapV5,197 transMapV5,253 transMapV5,276 transMapV5,334 transMapV5,367 transMapV5,375 transMapV5,392 transMapV5,406 transMapV5,418 transMapV5,457 transMapV5,502 transMapV5,512 transMapV5,545 transMapV5,551 transMapV5,564 transMapV5,724 transMapV5,766 transMapV5,845 ucscToINSDC,23 ucscToRefSeq,18 windowmaskerSdust,47 xenoRefGene,114 xenoRefGene,150 xenoRefGene,157 xenoRefGene,181 xenoRefGene,207 together chainEquCab2,123 chainHg38,123 chainMm10,123 chainNetEquCab2,126 chainNetHg38,126 chainNetMm10,126 chainNetRn6,128 chainRn6,125 netEquCab2,123 netHg38,123 netMm10,123 netRn6,125 snp148,1698 snp148Mult,1719 tolerate chainEquCab2,92 chainHg38,92 chainMm10,92 chainNetEquCab2,95 chainNetHg38,95 chainNetMm10,95 chainNetRn6,97 chainRn6,94 netEquCab2,92 netHg38,92 netMm10,92 netRn6,94 too snp148,1102 snp148Mult,1123 tool est,804 intronEst,888 mrna,521 refGene,341 transMapEnsemblV5,613 transMapEnsemblV5,644 transMapEstV5,582 transMapEstV5,613 transMapRefSeqV5,582 transMapRefSeqV5,613 transMapRnaV5,582 transMapRnaV5,613 transMapV5,688 transMapV5,719 windowmaskerSdust,24 xenoRefGene,306 toolkit windowmaskerSdust,31 windowmaskerSdust,38 tools nestedRepeats,314 rmsk,337 top chainEquCab2,508 chainHg38,508 chainMm10,508 chainNetEquCab2,511 chainNetHg38,511 chainNetMm10,511 chainNetRn6,514 chainRn6,511 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netEquCab2,508 netHg38,508 netMm10,508 netRn6,511 refGene,128 xenoRefGene,94 top-level chainEquCab2,383 chainEquCab2,403 chainHg38,383 chainHg38,403 chainMm10,383 chainMm10,403 chainNetEquCab2,386 chainNetEquCab2,406 chainNetHg38,386 chainNetHg38,406 chainNetMm10,386 chainNetMm10,406 chainNetRn6,389 chainNetRn6,409 chainRn6,386 chainRn6,406 netEquCab2,383 netEquCab2,403 netHg38,383 netHg38,403 netMm10,383 netMm10,403 netRn6,386 netRn6,406 total snp148,1042 snp148Mult,1063 track augustusGene,15 augustusGene,108 chainEquCab2,14 chainEquCab2,58 chainEquCab2,61 chainEquCab2,119 chainEquCab2,259 chainEquCab2,262 chainEquCab2,310 chainEquCab2,345 chainEquCab2,377 chainEquCab2,564 chainEquCab2,691 chainEquCab2,754 chainHg38,14 chainHg38,58 chainHg38,61 chainHg38,119 chainHg38,259 chainHg38,262 chainHg38,310 chainHg38,345 chainHg38,377 chainHg38,564 chainHg38,691 chainHg38,754 chainMm10,14 chainMm10,58 chainMm10,61 chainMm10,119 chainMm10,259 chainMm10,262 chainMm10,310 chainMm10,345 chainMm10,377 chainMm10,564 chainMm10,691 chainMm10,754 chainNetEquCab2,17 chainNetEquCab2,61 chainNetEquCab2,64 chainNetEquCab2,122 chainNetEquCab2,262 chainNetEquCab2,265 chainNetEquCab2,313 chainNetEquCab2,348 chainNetEquCab2,380 chainNetEquCab2,567 chainNetEquCab2,694 chainNetEquCab2,757 chainNetHg38,17 chainNetHg38,61 chainNetHg38,64 chainNetHg38,122 chainNetHg38,262 chainNetHg38,265 chainNetHg38,313 chainNetHg38,348 chainNetHg38,380 chainNetHg38,567 chainNetHg38,694 chainNetHg38,757 chainNetMm10,17 chainNetMm10,61 chainNetMm10,64 chainNetMm10,122 chainNetMm10,262 chainNetMm10,265 chainNetMm10,313 chainNetMm10,348 chainNetMm10,380 chainNetMm10,567 chainNetMm10,694 chainNetMm10,757 chainNetRn6,18 chainNetRn6,62 chainNetRn6,65 chainNetRn6,124 chainNetRn6,264 chainNetRn6,267 chainNetRn6,316 chainNetRn6,351 chainNetRn6,383 chainNetRn6,570 chainNetRn6,697 chainNetRn6,760 chainRn6,15 chainRn6,59 chainRn6,62 chainRn6,121 chainRn6,261 chainRn6,264 chainRn6,313 chainRn6,348 chainRn6,380 chainRn6,567 chainRn6,694 chainRn6,757 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 est,13 est,49 est,114 est,139 est,151 est,377 est,643 est,724 gap,10 gap,76 gc5BaseBw,16 gc5BaseBw,40 geneid,13 genscan,13 genscan,67 genscan,77 genscan,88 gold,11 gold,71 gold,141 intronEst,15 intronEst,127 intronEst,133 intronEst,195 intronEst,220 intronEst,232 intronEst,458 intronEst,724 intronEst,805 intronEst,808 microsat,12 microsat,51 microsat,59 microsat,87 mrna,14 mrna,30 mrna,60 mrna,85 mrna,97 mrna,323 mrna,441 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netEquCab2,14 netEquCab2,58 netEquCab2,61 netEquCab2,119 netEquCab2,259 netEquCab2,262 netEquCab2,310 netEquCab2,345 netEquCab2,377 netEquCab2,564 netEquCab2,691 netEquCab2,754 netHg38,14 netHg38,58 netHg38,61 netHg38,119 netHg38,259 netHg38,262 netHg38,310 netHg38,345 netHg38,377 netHg38,564 netHg38,691 netHg38,754 netMm10,14 netMm10,58 netMm10,61 netMm10,119 netMm10,259 netMm10,262 netMm10,310 netMm10,345 netMm10,377 netMm10,564 netMm10,691 netMm10,754 netRn6,15 netRn6,59 netRn6,62 netRn6,121 netRn6,261 netRn6,264 netRn6,313 netRn6,348 netRn6,380 netRn6,567 netRn6,694 netRn6,757 refGene,14 refGene,35 refGene,81 refGene,119 refGene,131 refGene,174 refGene,203 refGene,314 rmsk,11 rmsk,52 rmsk,144 rmsk,345 sgpGene,17 simpleRepeat,13 snp148,14 snp148,48 snp148,76 snp148,87 snp148,161 snp148,225 snp148,451 snp148,780 snp148,1594 snp148,1707 snp148,1813 snp148,2030 snp148Mult,20 snp148Mult,116 snp148Mult,155 snp148Mult,182 snp148Mult,246 snp148Mult,472 snp148Mult,801 snp148Mult,1615 snp148Mult,1728 snp148Mult,1834 snp148Mult,2051 transMapEnsemblV5,17 transMapEnsemblV5,97 transMapEnsemblV5,107 transMapEnsemblV5,232 transMapEnsemblV5,570 transMapEnsemblV5,574 transMapEnsemblV5,676 transMapEstV5,15 transMapEstV5,66 transMapEstV5,76 transMapEstV5,201 transMapEstV5,539 transMapEstV5,543 transMapEstV5,645 transMapRefSeqV5,16 transMapRefSeqV5,66 transMapRefSeqV5,76 transMapRefSeqV5,201 transMapRefSeqV5,539 transMapRefSeqV5,543 transMapRefSeqV5,645 transMapRnaV5,16 transMapRnaV5,66 transMapRnaV5,76 transMapRnaV5,201 transMapRnaV5,539 transMapRnaV5,543 transMapRnaV5,645 transMapV5,102 transMapV5,172 transMapV5,182 transMapV5,307 transMapV5,645 transMapV5,649 transMapV5,751 ucscToINSDC,16 ucscToINSDC,48 ucscToRefSeq,11 ucscToRefSeq,42 windowmaskerSdust,14 windowmaskerSdust,50 windowmaskerSdust,88 xenoRefGene,13 xenoRefGene,38 xenoRefGene,47 xenoRefGene,85 xenoRefGene,97 xenoRefGene,140 xenoRefGene,169 xenoRefGene,280 tracks augustusGene,12 augustusGene,42 chainEquCab2,768 chainHg38,768 chainMm10,768 chainNetEquCab2,771 chainNetHg38,771 chainNetMm10,771 chainNetRn6,774 chainRn6,771 cytoBandIdeo,10 est,10 est,57 est,422 gap,7 gc5BaseBw,11 geneid,10 genscan,10 genscan,57 genscan,75 gold,8 intronEst,12 intronEst,141 intronEst,503 mrna,10 mrna,38 mrna,361 netEquCab2,768 netHg38,768 netMm10,768 netRn6,771 refGene,9 refGene,71 refGene,89 sgpGene,14 snp148,1589 snp148,1755 snp148Mult,125 snp148Mult,1610 snp148Mult,1776 transMapEnsemblV5,14 transMapEnsemblV5,105 transMapEnsemblV5,523 transMapEnsemblV5,584 transMapEstV5,12 transMapEstV5,74 transMapEstV5,492 transMapEstV5,553 transMapRefSeqV5,13 transMapRefSeqV5,74 transMapRefSeqV5,492 transMapRefSeqV5,553 transMapRnaV5,13 transMapRnaV5,74 transMapRnaV5,492 transMapRnaV5,553 transMapV5,11 transMapV5,14 transMapV5,180 transMapV5,598 transMapV5,659 ucscToINSDC,13 ucscToRefSeq,8 xenoRefGene,10 xenoRefGene,55 traditional chainEquCab2,84 chainHg38,84 chainMm10,84 chainNetEquCab2,87 chainNetHg38,87 chainNetMm10,87 chainNetRn6,89 chainRn6,86 netEquCab2,84 netHg38,84 netMm10,84 netRn6,86 trained augustusGene,151 training augustusGene,163 augustusGene,177 augustusGene,181 augustusGene,200 augustusGene,229 augustusGene,244 augustusGene,260 augustusGene,274 transcribed est,42 est,457 intronEst,54 intronEst,538 transcript est,552 intronEst,633 snp148,527 snp148,562 snp148,597 snp148,658 snp148,707 snp148,1824 snp148Mult,548 snp148Mult,583 snp148Mult,618 snp148Mult,679 snp148Mult,728 snp148Mult,1845 transMapEnsemblV5,154 transMapEnsemblV5,325 transMapEnsemblV5,378 transMapEstV5,123 transMapEstV5,294 transMapEstV5,347 transMapRefSeqV5,123 transMapRefSeqV5,294 transMapRefSeqV5,347 transMapRnaV5,123 transMapRnaV5,294 transMapRnaV5,347 transMapV5,229 transMapV5,400 transMapV5,453 transcriptase est,508 intronEst,589 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 est,99 est,491 est,538 est,560 intronEst,180 intronEst,572 intronEst,619 intronEst,641 transcriptional genscan,29 transcripts augustusGene,125 refGene,412 snp148,440 snp148,476 snp148Mult,461 snp148Mult,497 transMapEnsemblV5,342 transMapEstV5,311 transMapRefSeqV5,311 transMapRnaV5,311 transMapV5,417 xenoRefGene,377 translated snp148,2119 snp148Mult,2140 transMapV5,156 translation augustusGene,58 translational genscan,30 snp148,672 snp148Mult,693 transmap transMapEnsemblV5,1 transMapEnsemblV5,3 transMapEnsemblV5,26 transMapEnsemblV5,441 transMapEnsemblV5,500 transMapEnsemblV5,589 transMapEnsemblV5,592 transMapEnsemblV5,595 transMapEnsemblV5,598 transMapEnsemblV5,664 transMapEstV5,1 transMapEstV5,3 transMapEstV5,24 transMapEstV5,410 transMapEstV5,469 transMapEstV5,558 transMapEstV5,561 transMapEstV5,564 transMapEstV5,567 transMapEstV5,633 transMapRefSeqV5,1 transMapRefSeqV5,3 transMapRefSeqV5,24 transMapRefSeqV5,410 transMapRefSeqV5,469 transMapRefSeqV5,558 transMapRefSeqV5,561 transMapRefSeqV5,564 transMapRefSeqV5,567 transMapRefSeqV5,633 transMapRnaV5,1 transMapRnaV5,3 transMapRnaV5,24 transMapRnaV5,410 transMapRnaV5,469 transMapRnaV5,558 transMapRnaV5,561 transMapRnaV5,564 transMapRnaV5,567 transMapRnaV5,633 transMapV5,1 transMapV5,3 transMapV5,23 transMapV5,71 transMapV5,101 transMapV5,158 transMapV5,516 transMapV5,575 transMapV5,664 transMapV5,667 transMapV5,670 transMapV5,673 transMapV5,739 transposable nestedRepeats,379 rmsk,402 transposons chainEquCab2,565 chainEquCab2,589 chainEquCab2,898 chainHg38,565 chainHg38,589 chainHg38,898 chainMm10,565 chainMm10,589 chainMm10,898 chainNetEquCab2,568 chainNetEquCab2,592 chainNetEquCab2,901 chainNetHg38,568 chainNetHg38,592 chainNetHg38,901 chainNetMm10,568 chainNetMm10,592 chainNetMm10,901 chainNetRn6,571 chainNetRn6,595 chainNetRn6,904 chainRn6,568 chainRn6,592 chainRn6,901 netEquCab2,565 netEquCab2,589 netEquCab2,898 netHg38,565 netHg38,589 netHg38,898 netMm10,565 netMm10,589 netMm10,898 netRn6,568 netRn6,592 netRn6,901 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 trimming chainEquCab2,796 chainHg38,796 chainMm10,796 chainNetEquCab2,799 chainNetHg38,799 chainNetMm10,799 chainNetRn6,802 chainRn6,799 netEquCab2,796 netHg38,796 netMm10,796 netRn6,799 trna rmsk,190 true augustusGene,133 snp148,122 snp148Mult,91 windowmaskerSdust,60 windowmaskerSdust,69 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 turn chainEquCab2,332 chainHg38,332 chainMm10,332 chainNetEquCab2,335 chainNetHg38,335 chainNetMm10,335 chainNetRn6,338 chainRn6,335 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netEquCab2,332 netHg38,332 netMm10,332 netRn6,335 refGene,166 xenoRefGene,132 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 two chainEquCab2,904 chainHg38,904 chainMm10,904 chainNetEquCab2,907 chainNetHg38,907 chainNetMm10,907 chainNetRn6,910 chainRn6,907 netEquCab2,904 netHg38,904 netMm10,904 netRn6,907 snp148,194 snp148,219 snp148,1232 snp148,1676 snp148Mult,215 snp148Mult,240 snp148Mult,1253 snp148Mult,1697 transMapEnsemblV5,453 transMapEnsemblV5,490 transMapEstV5,422 transMapEstV5,459 transMapRefSeqV5,422 transMapRefSeqV5,459 transMapRnaV5,422 transMapRnaV5,459 transMapV5,528 transMapV5,565 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 txt.gz snp148,2224 snp148Mult,2245 type est,167 est,197 gold,146 intronEst,248 intronEst,278 mrna,113 mrna,143 snp148,818 snp148,841 snp148,2078 snp148,2186 snp148Mult,839 snp148Mult,862 snp148Mult,2099 snp148Mult,2207 types augustusGene,90 chainEquCab2,504 chainHg38,504 chainMm10,504 chainNetEquCab2,507 chainNetHg38,507 chainNetMm10,507 chainNetRn6,510 chainRn6,507 est,246 est,425 gap,122 gold,137 intronEst,327 intronEst,506 mrna,192 mrna,364 netEquCab2,504 netHg38,504 netMm10,504 netRn6,507 transMapEnsemblV5,139 transMapEstV5,108 transMapRefSeqV5,108 transMapRnaV5,108 transMapV5,214 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 typically cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 est,31 est,460 gc5BaseBw,34 intronEst,43 intronEst,541 u chainEquCab2,1067 chainHg38,1067 chainMm10,1067 chainNetEquCab2,1070 chainNetHg38,1070 chainNetMm10,1070 chainNetRn6,1073 chainRn6,1070 netEquCab2,1067 netHg38,1067 netMm10,1067 netRn6,1070 ucsc est,728 intronEst,812 mrna,445 nestedRepeats,245 refGene,318 snp148,460 snp148,846 snp148,847 snp148,938 snp148,980 snp148,1008 snp148,1069 snp148,1127 snp148,1150 snp148,1167 snp148,1191 snp148,1807 snp148,1816 snp148,1886 snp148,1906 snp148,1930 snp148,1961 snp148Mult,481 snp148Mult,867 snp148Mult,868 snp148Mult,959 snp148Mult,1001 snp148Mult,1029 snp148Mult,1090 snp148Mult,1148 snp148Mult,1171 snp148Mult,1188 snp148Mult,1212 snp148Mult,1828 snp148Mult,1837 snp148Mult,1907 snp148Mult,1927 snp148Mult,1951 snp148Mult,1982 transMapEnsemblV5,36 transMapEnsemblV5,163 transMapEnsemblV5,184 transMapEnsemblV5,683 transMapEstV5,34 transMapEstV5,132 transMapEstV5,153 transMapEstV5,652 transMapRefSeqV5,34 transMapRefSeqV5,132 transMapRefSeqV5,153 transMapRefSeqV5,652 transMapRnaV5,34 transMapRnaV5,132 transMapRnaV5,153 transMapRnaV5,652 transMapV5,33 transMapV5,238 transMapV5,259 transMapV5,758 ucscToINSDC,18 ucscToRefSeq,13 xenoRefGene,284 undergone refGene,102 xenoRefGene,68 underlies genscan,143 underlying refGene,33 xenoRefGene,36 underneath chainEquCab2,832 chainHg38,832 chainMm10,832 chainNetEquCab2,835 chainNetHg38,835 chainNetMm10,835 chainNetRn6,838 chainRn6,835 netEquCab2,832 netHg38,832 netMm10,832 netRn6,835 undetermined snp148,269 snp148Mult,290 unexpected snp148,1111 snp148Mult,1132 ungapped chainEquCab2,443 chainHg38,443 chainMm10,443 chainNetEquCab2,446 chainNetHg38,446 chainNetMm10,446 chainNetRn6,449 chainRn6,446 netEquCab2,443 netHg38,443 netMm10,443 netRn6,446 unique transMapEnsemblV5,384 transMapEnsemblV5,395 transMapEnsemblV5,432 transMapEnsemblV5,443 transMapEstV5,353 transMapEstV5,364 transMapEstV5,401 transMapEstV5,412 transMapRefSeqV5,353 transMapRefSeqV5,364 transMapRefSeqV5,401 transMapRefSeqV5,412 transMapRnaV5,353 transMapRnaV5,364 transMapRnaV5,401 transMapRnaV5,412 transMapV5,459 transMapV5,470 transMapV5,507 transMapV5,518 unit geneid,175 university chainEquCab2,918 chainEquCab2,952 chainEquCab2,998 chainEquCab2,1021 chainHg38,918 chainHg38,952 chainHg38,998 chainHg38,1021 chainMm10,918 chainMm10,952 chainMm10,998 chainMm10,1021 chainNetEquCab2,921 chainNetEquCab2,955 chainNetEquCab2,1001 chainNetEquCab2,1024 chainNetHg38,921 chainNetHg38,955 chainNetHg38,1001 chainNetHg38,1024 chainNetMm10,921 chainNetMm10,955 chainNetMm10,1001 chainNetMm10,1024 chainNetRn6,924 chainNetRn6,958 chainNetRn6,1004 chainNetRn6,1027 chainRn6,921 chainRn6,955 chainRn6,1001 chainRn6,1024 netEquCab2,918 netEquCab2,952 netEquCab2,998 netEquCab2,1021 netHg38,918 netHg38,952 netHg38,998 netHg38,1021 netMm10,918 netMm10,952 netMm10,998 netMm10,1021 netRn6,921 netRn6,955 netRn6,1001 netRn6,1024 unknown rmsk,203 snp148,366 snp148,421 snp148,500 snp148,839 snp148Mult,387 snp148Mult,442 snp148Mult,521 snp148Mult,860 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 snp148,80 unlike snp148Mult,119 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed chainEquCab2,226 chainHg38,226 chainMm10,226 chainNetEquCab2,229 chainNetHg38,229 chainNetMm10,229 chainNetRn6,231 chainRn6,228 est,603 intronEst,684 netEquCab2,226 netHg38,226 netMm10,226 netRn6,228 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainEquCab2,184 chainHg38,184 chainMm10,184 chainNetEquCab2,187 chainNetHg38,187 chainNetMm10,187 chainNetRn6,189 chainRn6,186 netEquCab2,184 netHg38,184 netMm10,184 netRn6,186 unspliced est,6 est,632 intronEst,122 intronEst,713 unsure rmsk,263 untranslated snp148,808 snp148Mult,829 untranslated-3 snp148,721 snp148Mult,742 untranslated-5 snp148,732 snp148Mult,753 unusual snp148,844 snp148,1965 snp148Mult,865 snp148Mult,1986 up gold,77 rmsk,146 update est,783 intronEst,867 mrna,500 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 refGene,377 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoRefGene,342 updated refGene,37 xenoRefGene,40 upper snp148,1973 snp148Mult,1994 upstream_gene_variant snp148,548 snp148,797 snp148Mult,569 snp148Mult,818 use est,164 gold,88 intronEst,245 mrna,110 used augustusGene,147 augustusGene,175 augustusGene,184 augustusGene,232 augustusGene,247 chainEquCab2,293 chainEquCab2,665 chainEquCab2,696 chainEquCab2,787 chainEquCab2,839 chainEquCab2,872 chainHg38,293 chainHg38,665 chainHg38,696 chainHg38,787 chainHg38,839 chainHg38,872 chainMm10,293 chainMm10,665 chainMm10,696 chainMm10,787 chainMm10,839 chainMm10,872 chainNetEquCab2,296 chainNetEquCab2,668 chainNetEquCab2,699 chainNetEquCab2,790 chainNetEquCab2,842 chainNetEquCab2,875 chainNetHg38,296 chainNetHg38,668 chainNetHg38,699 chainNetHg38,790 chainNetHg38,842 chainNetHg38,875 chainNetMm10,296 chainNetMm10,668 chainNetMm10,699 chainNetMm10,790 chainNetMm10,842 chainNetMm10,875 chainNetRn6,298 chainNetRn6,671 chainNetRn6,702 chainNetRn6,793 chainNetRn6,845 chainNetRn6,878 chainRn6,295 chainRn6,668 chainRn6,699 chainRn6,790 chainRn6,842 chainRn6,875 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 est,121 est,273 est,332 est,571 genscan,160 gold,15 intronEst,202 intronEst,354 intronEst,413 intronEst,652 mrna,67 mrna,219 mrna,278 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netEquCab2,293 netEquCab2,665 netEquCab2,696 netEquCab2,787 netEquCab2,839 netEquCab2,872 netHg38,293 netHg38,665 netHg38,696 netHg38,787 netHg38,839 netHg38,872 netMm10,293 netMm10,665 netMm10,696 netMm10,787 netMm10,839 netMm10,872 netRn6,295 netRn6,668 netRn6,699 netRn6,790 netRn6,842 netRn6,875 rmsk,299 rmsk,341 snp148,375 snp148,820 snp148,1777 snp148,2183 snp148Mult,396 snp148Mult,841 snp148Mult,1798 snp148Mult,2204 transMapEnsemblV5,57 transMapEnsemblV5,65 transMapEnsemblV5,187 transMapEnsemblV5,239 transMapEnsemblV5,244 transMapEnsemblV5,264 transMapEnsemblV5,284 transMapEnsemblV5,316 transMapEnsemblV5,648 transMapEstV5,156 transMapEstV5,208 transMapEstV5,213 transMapEstV5,233 transMapEstV5,253 transMapEstV5,285 transMapEstV5,617 transMapRefSeqV5,156 transMapRefSeqV5,208 transMapRefSeqV5,213 transMapRefSeqV5,233 transMapRefSeqV5,253 transMapRefSeqV5,285 transMapRefSeqV5,617 transMapRnaV5,156 transMapRnaV5,208 transMapRnaV5,213 transMapRnaV5,233 transMapRnaV5,253 transMapRnaV5,285 transMapRnaV5,617 transMapV5,70 transMapV5,262 transMapV5,314 transMapV5,319 transMapV5,339 transMapV5,359 transMapV5,391 transMapV5,723 useful chainEquCab2,278 chainEquCab2,477 chainHg38,278 chainHg38,477 chainMm10,278 chainMm10,477 chainNetEquCab2,281 chainNetEquCab2,480 chainNetHg38,281 chainNetHg38,480 chainNetMm10,281 chainNetMm10,480 chainNetRn6,283 chainNetRn6,483 chainRn6,280 chainRn6,480 microsat,20 netEquCab2,278 netEquCab2,477 netHg38,278 netHg38,477 netMm10,278 netMm10,477 netRn6,280 netRn6,480 user est,391 intronEst,472 mrna,337 transMapEnsemblV5,121 transMapEstV5,90 transMapRefSeqV5,90 transMapRnaV5,90 transMapV5,196 users refGene,183 xenoRefGene,149 uses rmsk,79 snp148,1833 snp148,2105 snp148Mult,1854 snp148Mult,2126 using augustusGene,295 chainEquCab2,74 chainEquCab2,602 chainEquCab2,761 chainHg38,74 chainHg38,602 chainHg38,761 chainMm10,74 chainMm10,602 chainMm10,761 chainNetEquCab2,77 chainNetEquCab2,605 chainNetEquCab2,764 chainNetHg38,77 chainNetHg38,605 chainNetHg38,764 chainNetMm10,77 chainNetMm10,605 chainNetMm10,764 chainNetRn6,79 chainNetRn6,608 chainNetRn6,767 chainRn6,76 chainRn6,605 chainRn6,764 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 est,653 geneid,84 geneid,163 intronEst,734 microsat,90 mrna,393 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netEquCab2,74 netEquCab2,602 netEquCab2,761 netHg38,74 netHg38,602 netHg38,761 netMm10,74 netMm10,602 netMm10,761 netRn6,76 netRn6,605 netRn6,764 refGene,259 rmsk,15 rmsk,290 sgpGene,6 snp148,828 snp148,835 snp148Mult,849 snp148Mult,856 transMapEnsemblV5,76 transMapEnsemblV5,562 transMapEnsemblV5,611 transMapEnsemblV5,763 transMapEstV5,45 transMapEstV5,531 transMapEstV5,580 transMapEstV5,732 transMapRefSeqV5,45 transMapRefSeqV5,531 transMapRefSeqV5,580 transMapRefSeqV5,732 transMapRnaV5,45 transMapRnaV5,531 transMapRnaV5,580 transMapRnaV5,732 transMapV5,44 transMapV5,82 transMapV5,125 transMapV5,136 transMapV5,143 transMapV5,637 transMapV5,686 transMapV5,838 xenoRefGene,225 ustat windowmaskerSdust,66 usually est,38 intronEst,50 nestedRepeats,192 snp148,1228 snp148,1784 snp148Mult,1249 snp148Mult,1805 transMapEnsemblV5,503 transMapEstV5,472 transMapRefSeqV5,472 transMapRnaV5,472 transMapV5,578 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 utr snp148,713 snp148,718 snp148,724 snp148,729 snp148Mult,734 snp148Mult,739 snp148Mult,745 snp148Mult,750 transMapV5,165 v3.1 augustusGene,7 v4 transMapEnsemblV5,665 transMapEstV5,634 transMapRefSeqV5,634 transMapRnaV5,634 v5 transMapV5,2 transMapV5,740 valid est,212 intronEst,293 mrna,158 validate refGene,186 snp148,377 snp148Mult,398 xenoRefGene,152 validated snp148,384 snp148Mult,405 validation genscan,108 snp148,373 snp148,423 snp148,2124 snp148Mult,394 snp148Mult,444 snp148Mult,2145 value est,283 intronEst,364 mrna,229 snp148,1580 snp148Mult,1601 variant snp148,179 snp148,379 snp148,381 snp148,429 snp148,437 snp148,464 snp148,510 snp148,528 snp148,539 snp148,551 snp148,563 snp148,576 snp148,604 snp148,641 snp148,665 snp148,696 snp148,714 snp148,725 snp148,736 snp148,756 snp148,824 snp148,826 snp148,833 snp148,1273 snp148,2207 snp148Mult,200 snp148Mult,400 snp148Mult,402 snp148Mult,450 snp148Mult,458 snp148Mult,485 snp148Mult,531 snp148Mult,549 snp148Mult,560 snp148Mult,572 snp148Mult,584 snp148Mult,597 snp148Mult,625 snp148Mult,662 snp148Mult,686 snp148Mult,717 snp148Mult,735 snp148Mult,746 snp148Mult,757 snp148Mult,777 snp148Mult,845 snp148Mult,847 snp148Mult,854 snp148Mult,1294 snp148Mult,2228 variants snp148,147 snp148,211 snp148,1377 snp148,1384 snp148Mult,168 snp148Mult,232 snp148Mult,1398 snp148Mult,1405 variation microsat,7 nestedRepeats,11 rmsk,6 simpleRepeat,8 snp148,9 snp148,123 snp148,250 snp148,270 snp148,283 snp148,309 snp148,2271 snp148Mult,15 snp148Mult,92 snp148Mult,271 snp148Mult,291 snp148Mult,304 snp148Mult,330 snp148Mult,2292 windowmaskerSdust,9 variety gc5BaseBw,46 vb chainEquCab2,1025 chainHg38,1025 chainMm10,1025 chainNetEquCab2,1028 chainNetHg38,1028 chainNetMm10,1028 chainNetRn6,1031 chainRn6,1028 netEquCab2,1025 netHg38,1025 netMm10,1025 netRn6,1028 vector est,468 intronEst,549 version augustusGene,24 augustusGene,264 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 rmsk,58 transMapEnsemblV5,8 transMapEstV5,6 transMapRefSeqV5,7 transMapRnaV5,7 transMapV5,5 versions augustusGene,280 nestedRepeats,251 nestedRepeats,267 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 transMapEnsemblV5,32 transMapEnsemblV5,159 transMapEnsemblV5,192 transMapEstV5,30 transMapEstV5,128 transMapEstV5,161 transMapRefSeqV5,30 transMapRefSeqV5,128 transMapRefSeqV5,161 transMapRnaV5,30 transMapRnaV5,128 transMapRnaV5,161 transMapV5,29 transMapV5,114 transMapV5,234 transMapV5,267 vertebrates augustusGene,210 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 very est,674 intronEst,755 via transMapEnsemblV5,327 transMapEstV5,296 transMapRefSeqV5,296 transMapRnaV5,296 transMapV5,402 view chainEquCab2,454 chainHg38,454 chainMm10,454 chainNetEquCab2,457 chainNetHg38,457 chainNetMm10,457 chainNetRn6,460 chainRn6,457 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 est,208 intronEst,289 mrna,154 netEquCab2,454 netHg38,454 netMm10,454 netRn6,457 snp148,492 snp148Mult,513 viewed est,636 gold,80 intronEst,717 viewing snp148,159 snp148Mult,180 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 visit refGene,40 w chainEquCab2,1027 chainEquCab2,1047 chainEquCab2,1095 chainHg38,1027 chainHg38,1047 chainHg38,1095 chainMm10,1027 chainMm10,1047 chainMm10,1095 chainNetEquCab2,1030 chainNetEquCab2,1050 chainNetEquCab2,1098 chainNetHg38,1030 chainNetHg38,1050 chainNetHg38,1098 chainNetMm10,1030 chainNetMm10,1050 chainNetMm10,1098 chainNetRn6,1033 chainNetRn6,1053 chainNetRn6,1101 chainRn6,1030 chainRn6,1050 chainRn6,1098 gold,149 netEquCab2,1027 netEquCab2,1047 netEquCab2,1095 netHg38,1027 netHg38,1047 netHg38,1095 netMm10,1027 netMm10,1047 netMm10,1095 netRn6,1030 netRn6,1050 netRn6,1098 waack augustusGene,319 ward snp148,2253 snp148Mult,2274 was augustusGene,231 augustusGene,246 augustusGene,265 augustusGene,281 chainEquCab2,646 chainEquCab2,664 chainEquCab2,785 chainEquCab2,830 chainEquCab2,838 chainEquCab2,858 chainEquCab2,870 chainEquCab2,895 chainEquCab2,913 chainEquCab2,948 chainHg38,646 chainHg38,664 chainHg38,785 chainHg38,830 chainHg38,838 chainHg38,858 chainHg38,870 chainHg38,895 chainHg38,913 chainHg38,948 chainMm10,646 chainMm10,664 chainMm10,785 chainMm10,830 chainMm10,838 chainMm10,858 chainMm10,870 chainMm10,895 chainMm10,913 chainMm10,948 chainNetEquCab2,649 chainNetEquCab2,667 chainNetEquCab2,788 chainNetEquCab2,833 chainNetEquCab2,841 chainNetEquCab2,861 chainNetEquCab2,873 chainNetEquCab2,898 chainNetEquCab2,916 chainNetEquCab2,951 chainNetHg38,649 chainNetHg38,667 chainNetHg38,788 chainNetHg38,833 chainNetHg38,841 chainNetHg38,861 chainNetHg38,873 chainNetHg38,898 chainNetHg38,916 chainNetHg38,951 chainNetMm10,649 chainNetMm10,667 chainNetMm10,788 chainNetMm10,833 chainNetMm10,841 chainNetMm10,861 chainNetMm10,873 chainNetMm10,898 chainNetMm10,916 chainNetMm10,951 chainNetRn6,652 chainNetRn6,670 chainNetRn6,791 chainNetRn6,836 chainNetRn6,844 chainNetRn6,864 chainNetRn6,876 chainNetRn6,901 chainNetRn6,919 chainNetRn6,954 chainRn6,649 chainRn6,667 chainRn6,788 chainRn6,833 chainRn6,841 chainRn6,861 chainRn6,873 chainRn6,898 chainRn6,916 chainRn6,951 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 est,696 est,725 intronEst,777 intronEst,809 microsat,108 mrna,412 mrna,442 netEquCab2,646 netEquCab2,664 netEquCab2,785 netEquCab2,830 netEquCab2,838 netEquCab2,858 netEquCab2,870 netEquCab2,895 netEquCab2,913 netEquCab2,948 netHg38,646 netHg38,664 netHg38,785 netHg38,830 netHg38,838 netHg38,858 netHg38,870 netHg38,895 netHg38,913 netHg38,948 netMm10,646 netMm10,664 netMm10,785 netMm10,830 netMm10,838 netMm10,858 netMm10,870 netMm10,895 netMm10,913 netMm10,948 netRn6,649 netRn6,667 netRn6,788 netRn6,833 netRn6,841 netRn6,861 netRn6,873 netRn6,898 netRn6,916 netRn6,951 refGene,286 refGene,315 rmsk,12 rmsk,262 simpleRepeat,68 snp148,972 snp148,998 snp148,1038 snp148,1454 snp148,2097 snp148Mult,993 snp148Mult,1019 snp148Mult,1059 snp148Mult,1475 snp148Mult,2118 transMapEnsemblV5,221 transMapEnsemblV5,238 transMapEnsemblV5,283 transMapEnsemblV5,315 transMapEnsemblV5,677 transMapEstV5,190 transMapEstV5,207 transMapEstV5,252 transMapEstV5,284 transMapEstV5,646 transMapRefSeqV5,190 transMapRefSeqV5,207 transMapRefSeqV5,252 transMapRefSeqV5,284 transMapRefSeqV5,646 transMapRnaV5,190 transMapRnaV5,207 transMapRnaV5,252 transMapRnaV5,284 transMapRnaV5,646 transMapV5,296 transMapV5,313 transMapV5,358 transMapV5,390 transMapV5,752 ucscToINSDC,49 ucscToRefSeq,43 windowmaskerSdust,52 windowmaskerSdust,78 xenoRefGene,252 xenoRefGene,281 way transMapEnsemblV5,588 transMapEstV5,557 transMapRefSeqV5,557 transMapRnaV5,557 transMapV5,663 ways gc5BaseBw,48 we rmsk,122 snp148,1838 snp148,1864 snp148,1881 snp148Mult,1859 snp148Mult,1885 snp148Mult,1902 webb chainEquCab2,927 chainEquCab2,964 chainHg38,927 chainHg38,964 chainMm10,927 chainMm10,964 chainNetEquCab2,930 chainNetEquCab2,967 chainNetHg38,930 chainNetHg38,967 chainNetMm10,930 chainNetMm10,967 chainNetRn6,933 chainNetRn6,970 chainRn6,930 chainRn6,967 netEquCab2,927 netEquCab2,964 netHg38,927 netHg38,964 netMm10,927 netMm10,964 netRn6,930 netRn6,967 weekly refGene,38 xenoRefGene,41 weight geneid,86 snp148,73 snp148,1542 snp148,1548 snp148,1557 snp148,1564 snp148,1567 snp148,1579 snp148Mult,113 snp148Mult,130 snp148Mult,160 snp148Mult,1563 snp148Mult,1569 snp148Mult,1578 snp148Mult,1585 snp148Mult,1588 snp148Mult,1600 weights snp148,2094 snp148Mult,2115 well augustusGene,79 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 est,540 est,563 genscan,37 intronEst,621 intronEst,644 rmsk,54 were augustusGene,51 augustusGene,67 augustusGene,126 augustusGene,150 augustusGene,183 chainEquCab2,575 chainEquCab2,583 chainEquCab2,590 chainEquCab2,597 chainEquCab2,609 chainEquCab2,682 chainEquCab2,756 chainEquCab2,936 chainEquCab2,980 chainEquCab2,994 chainHg38,575 chainHg38,583 chainHg38,590 chainHg38,597 chainHg38,609 chainHg38,682 chainHg38,756 chainHg38,936 chainHg38,980 chainHg38,994 chainMm10,575 chainMm10,583 chainMm10,590 chainMm10,597 chainMm10,609 chainMm10,682 chainMm10,756 chainMm10,936 chainMm10,980 chainMm10,994 chainNetEquCab2,578 chainNetEquCab2,586 chainNetEquCab2,593 chainNetEquCab2,600 chainNetEquCab2,612 chainNetEquCab2,685 chainNetEquCab2,759 chainNetEquCab2,939 chainNetEquCab2,983 chainNetEquCab2,997 chainNetHg38,578 chainNetHg38,586 chainNetHg38,593 chainNetHg38,600 chainNetHg38,612 chainNetHg38,685 chainNetHg38,759 chainNetHg38,939 chainNetHg38,983 chainNetHg38,997 chainNetMm10,578 chainNetMm10,586 chainNetMm10,593 chainNetMm10,600 chainNetMm10,612 chainNetMm10,685 chainNetMm10,759 chainNetMm10,939 chainNetMm10,983 chainNetMm10,997 chainNetRn6,581 chainNetRn6,589 chainNetRn6,596 chainNetRn6,603 chainNetRn6,615 chainNetRn6,688 chainNetRn6,762 chainNetRn6,942 chainNetRn6,986 chainNetRn6,1000 chainRn6,578 chainRn6,586 chainRn6,593 chainRn6,600 chainRn6,612 chainRn6,685 chainRn6,759 chainRn6,939 chainRn6,983 chainRn6,997 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 est,590 est,648 est,720 gc5BaseBw,80 intronEst,671 intronEst,729 mrna,388 mrna,436 netEquCab2,575 netEquCab2,583 netEquCab2,590 netEquCab2,597 netEquCab2,609 netEquCab2,682 netEquCab2,756 netEquCab2,936 netEquCab2,980 netEquCab2,994 netHg38,575 netHg38,583 netHg38,590 netHg38,597 netHg38,609 netHg38,682 netHg38,756 netHg38,936 netHg38,980 netHg38,994 netMm10,575 netMm10,583 netMm10,590 netMm10,597 netMm10,609 netMm10,682 netMm10,756 netMm10,936 netMm10,980 netMm10,994 netRn6,578 netRn6,586 netRn6,593 netRn6,600 netRn6,612 netRn6,685 netRn6,759 netRn6,939 netRn6,983 netRn6,997 refGene,253 refGene,269 refGene,310 snp148,1614 snp148,2031 snp148,2049 snp148,2064 snp148,2084 snp148,2128 snp148,2145 snp148,2152 snp148,2182 snp148Mult,1635 snp148Mult,2052 snp148Mult,2070 snp148Mult,2085 snp148Mult,2105 snp148Mult,2149 snp148Mult,2166 snp148Mult,2173 snp148Mult,2203 transMapEnsemblV5,156 transMapEnsemblV5,186 transMapEnsemblV5,212 transMapEnsemblV5,243 transMapEnsemblV5,249 transMapEnsemblV5,263 transMapEnsemblV5,349 transMapEnsemblV5,380 transMapEnsemblV5,393 transMapEstV5,125 transMapEstV5,155 transMapEstV5,181 transMapEstV5,212 transMapEstV5,218 transMapEstV5,232 transMapEstV5,318 transMapEstV5,349 transMapEstV5,362 transMapRefSeqV5,125 transMapRefSeqV5,155 transMapRefSeqV5,181 transMapRefSeqV5,212 transMapRefSeqV5,218 transMapRefSeqV5,232 transMapRefSeqV5,318 transMapRefSeqV5,349 transMapRefSeqV5,362 transMapRnaV5,125 transMapRnaV5,155 transMapRnaV5,181 transMapRnaV5,212 transMapRnaV5,218 transMapRnaV5,232 transMapRnaV5,318 transMapRnaV5,349 transMapRnaV5,362 transMapV5,116 transMapV5,129 transMapV5,231 transMapV5,261 transMapV5,287 transMapV5,318 transMapV5,324 transMapV5,338 transMapV5,424 transMapV5,455 transMapV5,468 ucscToINSDC,36 ucscToRefSeq,30 xenoRefGene,219 xenoRefGene,235 xenoRefGene,276 wheeler est,780 intronEst,864 mrna,497 when augustusGene,189 augustusGene,239 chainEquCab2,405 chainHg38,405 chainMm10,405 chainNetEquCab2,408 chainNetHg38,408 chainNetMm10,408 chainNetRn6,411 chainRn6,408 est,144 est,154 est,681 intronEst,34 intronEst,225 intronEst,235 intronEst,762 mrna,90 mrna,100 mrna,397 netEquCab2,405 netHg38,405 netMm10,405 netRn6,408 refGene,271 snp148,101 snp148,158 snp148,1750 snp148,1791 snp148,1960 snp148Mult,70 snp148Mult,179 snp148Mult,1771 snp148Mult,1812 snp148Mult,1981 transMapEnsemblV5,466 transMapEstV5,435 transMapRefSeqV5,435 transMapRnaV5,435 transMapV5,541 xenoRefGene,237 where chainEquCab2,191 chainHg38,191 chainMm10,191 chainNetEquCab2,194 chainNetHg38,194 chainNetMm10,194 chainNetRn6,196 chainRn6,193 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,95 netEquCab2,191 netHg38,191 netMm10,191 netRn6,193 snp148,511 snp148,605 snp148,642 snp148,697 snp148Mult,532 snp148Mult,626 snp148Mult,663 snp148Mult,718 transMapEnsemblV5,271 transMapEnsemblV5,372 transMapEnsemblV5,421 transMapEnsemblV5,509 transMapEstV5,240 transMapEstV5,341 transMapEstV5,390 transMapEstV5,478 transMapRefSeqV5,240 transMapRefSeqV5,341 transMapRefSeqV5,390 transMapRefSeqV5,478 transMapRnaV5,240 transMapRnaV5,341 transMapRnaV5,390 transMapRnaV5,478 transMapV5,346 transMapV5,447 transMapV5,496 transMapV5,584 whereby snp148,577 snp148Mult,598 whether chainEquCab2,854 chainHg38,854 chainMm10,854 chainNetEquCab2,857 chainNetHg38,857 chainNetMm10,857 chainNetRn6,860 chainRn6,857 netEquCab2,854 netHg38,854 netMm10,854 netRn6,857 snp148,119 snp148,128 snp148Mult,88 snp148Mult,97 which augustusGene,160 augustusGene,228 chainEquCab2,322 chainEquCab2,613 chainEquCab2,819 chainHg38,322 chainHg38,613 chainHg38,819 chainMm10,322 chainMm10,613 chainMm10,819 chainNetEquCab2,325 chainNetEquCab2,616 chainNetEquCab2,822 chainNetHg38,325 chainNetHg38,616 chainNetHg38,822 chainNetMm10,325 chainNetMm10,616 chainNetMm10,822 chainNetRn6,328 chainNetRn6,619 chainNetRn6,825 chainRn6,325 chainRn6,616 chainRn6,822 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 est,104 est,231 est,497 est,522 est,668 geneid,33 intronEst,185 intronEst,312 intronEst,578 intronEst,603 intronEst,749 mrna,177 nestedRepeats,31 nestedRepeats,87 netEquCab2,322 netEquCab2,613 netEquCab2,819 netHg38,322 netHg38,613 netHg38,819 netMm10,322 netMm10,613 netMm10,819 netRn6,325 netRn6,616 netRn6,822 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 sgpGene,42 simpleRepeat,27 snp148,55 snp148,666 snp148,1035 snp148,1205 snp148,1583 snp148,1595 snp148,1674 snp148,1924 snp148Mult,126 snp148Mult,687 snp148Mult,1056 snp148Mult,1226 snp148Mult,1604 snp148Mult,1616 snp148Mult,1695 snp148Mult,1945 transMapEnsemblV5,615 transMapEstV5,584 transMapRefSeqV5,584 transMapRnaV5,584 transMapV5,145 transMapV5,690 while chainEquCab2,214 chainHg38,214 chainMm10,214 chainNetEquCab2,217 chainNetHg38,217 chainNetMm10,217 chainNetRn6,219 chainRn6,216 netEquCab2,214 netHg38,214 netMm10,214 netRn6,216 snp148,1946 snp148Mult,143 snp148Mult,1967 white gap,105 whole chainEquCab2,462 chainHg38,462 chainMm10,462 chainNetEquCab2,465 chainNetHg38,465 chainNetMm10,465 chainNetRn6,468 chainRn6,465 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 gold,150 netEquCab2,462 netHg38,462 netMm10,462 netRn6,465 transMapEnsemblV5,605 transMapEstV5,574 transMapRefSeqV5,574 transMapRnaV5,574 transMapV5,680 whose snp148,1086 snp148Mult,1107 transMapEnsemblV5,218 transMapEstV5,187 transMapRefSeqV5,187 transMapRnaV5,187 transMapV5,293 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 snp148,169 snp148,176 snp148,203 snp148Mult,190 snp148Mult,197 snp148Mult,224 wildcards est,269 intronEst,350 mrna,215 will est,302 est,320 est,349 est,366 intronEst,383 intronEst,401 intronEst,430 intronEst,447 mrna,248 mrna,266 mrna,295 mrna,312 rmsk,277 rmsk,283 snp148,96 snp148Mult,147 transMapEnsemblV5,62 window-based windowmaskerSdust,101 windowmasker windowmaskerSdust,7 windowmaskerSdust,21 windowmaskerSdust,23 windowmaskerSdust,51 windowmaskerSdust,58 windowmaskerSdust,65 windowmaskerSdust,100 windowmaskersdust windowmaskerSdust,83 windows gc5BaseBw,7 gc5BaseBw,29 wish est,233 intronEst,314 mrna,179 refGene,240 xenoRefGene,206 with augustusGene,128 augustusGene,323 chainEquCab2,42 chainEquCab2,205 chainEquCab2,216 chainEquCab2,585 chainEquCab2,697 chainEquCab2,773 chainEquCab2,897 chainEquCab2,929 chainEquCab2,961 chainEquCab2,1098 chainHg38,42 chainHg38,205 chainHg38,216 chainHg38,585 chainHg38,697 chainHg38,773 chainHg38,897 chainHg38,929 chainHg38,961 chainHg38,1098 chainMm10,42 chainMm10,205 chainMm10,216 chainMm10,585 chainMm10,697 chainMm10,773 chainMm10,897 chainMm10,929 chainMm10,961 chainMm10,1098 chainNetEquCab2,45 chainNetEquCab2,208 chainNetEquCab2,219 chainNetEquCab2,588 chainNetEquCab2,700 chainNetEquCab2,776 chainNetEquCab2,900 chainNetEquCab2,932 chainNetEquCab2,964 chainNetEquCab2,1101 chainNetHg38,45 chainNetHg38,208 chainNetHg38,219 chainNetHg38,588 chainNetHg38,700 chainNetHg38,776 chainNetHg38,900 chainNetHg38,932 chainNetHg38,964 chainNetHg38,1101 chainNetMm10,45 chainNetMm10,208 chainNetMm10,219 chainNetMm10,588 chainNetMm10,700 chainNetMm10,776 chainNetMm10,900 chainNetMm10,932 chainNetMm10,964 chainNetMm10,1101 chainNetRn6,46 chainNetRn6,210 chainNetRn6,221 chainNetRn6,591 chainNetRn6,703 chainNetRn6,779 chainNetRn6,903 chainNetRn6,935 chainNetRn6,967 chainNetRn6,1104 chainRn6,43 chainRn6,207 chainRn6,218 chainRn6,588 chainRn6,700 chainRn6,776 chainRn6,900 chainRn6,932 chainRn6,964 chainRn6,1101 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 est,103 est,499 est,637 est,673 est,716 gap,53 gc5BaseBw,36 geneid,63 gold,52 gold,142 intronEst,184 intronEst,580 intronEst,718 intronEst,754 intronEst,797 microsat,69 microsat,76 mrna,432 nestedRepeats,133 netEquCab2,42 netEquCab2,205 netEquCab2,216 netEquCab2,585 netEquCab2,697 netEquCab2,773 netEquCab2,897 netEquCab2,929 netEquCab2,961 netEquCab2,1098 netHg38,42 netHg38,205 netHg38,216 netHg38,585 netHg38,697 netHg38,773 netHg38,897 netHg38,929 netHg38,961 netHg38,1098 netMm10,42 netMm10,205 netMm10,216 netMm10,585 netMm10,697 netMm10,773 netMm10,897 netMm10,929 netMm10,961 netMm10,1098 netRn6,43 netRn6,207 netRn6,218 netRn6,588 netRn6,700 netRn6,776 netRn6,900 netRn6,932 netRn6,964 netRn6,1101 refGene,262 refGene,306 rmsk,111 rmsk,225 sgpGene,70 simpleRepeat,52 snp148,411 snp148,417 snp148,792 snp148,857 snp148,904 snp148,1373 snp148,1379 snp148,1459 snp148,1773 snp148,1786 snp148,2003 snp148,2200 snp148Mult,432 snp148Mult,438 snp148Mult,813 snp148Mult,878 snp148Mult,925 snp148Mult,1394 snp148Mult,1400 snp148Mult,1480 snp148Mult,1794 snp148Mult,1807 snp148Mult,2024 snp148Mult,2221 transMapEnsemblV5,52 transMapEnsemblV5,183 transMapEnsemblV5,251 transMapEnsemblV5,351 transMapEnsemblV5,353 transMapEnsemblV5,582 transMapEstV5,152 transMapEstV5,220 transMapEstV5,320 transMapEstV5,322 transMapEstV5,551 transMapRefSeqV5,152 transMapRefSeqV5,220 transMapRefSeqV5,320 transMapRefSeqV5,322 transMapRefSeqV5,551 transMapRnaV5,152 transMapRnaV5,220 transMapRnaV5,320 transMapRnaV5,322 transMapRnaV5,551 transMapV5,258 transMapV5,326 transMapV5,426 transMapV5,428 transMapV5,657 windowmaskerSdust,54 xenoRefGene,228 xenoRefGene,272 within est,137 est,550 est,705 gold,117 intronEst,218 intronEst,631 intronEst,786 mrna,83 mrna,421 refGene,117 refGene,295 simpleRepeat,37 snp148,530 snp148Mult,551 transMapEnsemblV5,653 transMapEstV5,622 transMapRefSeqV5,622 transMapRnaV5,622 transMapV5,728 xenoRefGene,83 xenoRefGene,261 wj chainEquCab2,1041 chainEquCab2,1083 chainHg38,1041 chainHg38,1083 chainMm10,1041 chainMm10,1083 chainNetEquCab2,1044 chainNetEquCab2,1086 chainNetHg38,1044 chainNetHg38,1086 chainNetMm10,1044 chainNetMm10,1086 chainNetRn6,1047 chainNetRn6,1089 chainRn6,1044 chainRn6,1086 est,799 intronEst,883 mrna,516 netEquCab2,1041 netEquCab2,1083 netHg38,1041 netHg38,1083 netMm10,1041 netMm10,1083 netRn6,1044 netRn6,1086 refGene,336 xenoRefGene,302 wm windowmaskerSdust,1 wm_counts windowmaskerSdust,64 windowmaskerSdust,67 worldwide est,742 intronEst,826 mrna,459 refGene,326 transMapEnsemblV5,699 transMapEstV5,668 transMapRefSeqV5,668 transMapRnaV5,668 transMapV5,774 xenoRefGene,292 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 written genscan,20 microsat,109 simpleRepeat,69 www.repeatmasker.org nestedRepeats,333 rmsk,356 xm_ snp148,454 snp148,1800 snp148Mult,475 snp148Mult,1821 xr_ snp148,456 snp148Mult,477 y snp148,1066 snp148Mult,1087 yap chainEquCab2,1024 chainHg38,1024 chainMm10,1024 chainNetEquCab2,1027 chainNetHg38,1027 chainNetMm10,1027 chainNetRn6,1030 chainRn6,1027 netEquCab2,1024 netHg38,1024 netMm10,1024 netRn6,1027 you est,232 intronEst,313 mrna,178 refGene,239 rmsk,115 snp148,1703 snp148Mult,1724 xenoRefGene,205 younger nestedRepeats,94 your transMapEnsemblV5,630 transMapEstV5,599 transMapRefSeqV5,599 transMapRnaV5,599 transMapV5,705 z chainEquCab2,1087 chainHg38,1087 chainMm10,1087 chainNetEquCab2,1090 chainNetHg38,1090 chainNetMm10,1090 chainNetRn6,1093 chainRn6,1090 netEquCab2,1087 netHg38,1087 netMm10,1087 netRn6,1090 zebrafish augustusGene,203 augustusGene,279 zhang chainEquCab2,925 chainEquCab2,1086 chainHg38,925 chainHg38,1086 chainMm10,925 chainMm10,1086 chainNetEquCab2,928 chainNetEquCab2,1089 chainNetHg38,928 chainNetHg38,1089 chainNetMm10,928 chainNetMm10,1089 chainNetRn6,931 chainNetRn6,1092 chainRn6,928 chainRn6,1089 netEquCab2,925 netEquCab2,1086 netHg38,925 netHg38,1086 netMm10,925 netMm10,1086 netRn6,928 netRn6,1089 zheng chainEquCab2,924 chainHg38,924 chainMm10,924 chainNetEquCab2,927 chainNetHg38,927 chainNetMm10,927 chainNetRn6,930 chainRn6,927 netEquCab2,924 netHg38,924 netMm10,924 netRn6,927 zhu transMapEnsemblV5,785 transMapEstV5,754 transMapRefSeqV5,754 transMapRnaV5,754 transMapV5,860 zoom snp148,156 snp148Mult,177 zoomed-in genscan,104