0 cons6way,290 cons6way,1965 nestedRepeats,237 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1 refGene,295 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,136 0.3 cons6way,1801 cons6way,1804 0.5 augustusGene,138 est,705 intronEst,786 mrna,421 xenoRefGene,261 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 0.9x gold,43 000 cons6way,734 est,665 gap,130 gap,145 intronEst,746 1 augustusGene,310 chainAilMel1,388 chainAilMel1,519 chainAilMel1,709 chainAilMel1,1108 chainCanFam2,385 chainCanFam2,516 chainCanFam2,706 chainCanFam2,1105 chainHg19,385 chainHg19,516 chainHg19,706 chainHg19,1105 chainMm9,385 chainMm9,516 chainMm9,706 chainMm9,1105 chainMonDom5,385 chainMonDom5,516 chainMonDom5,706 chainMonDom5,1105 chainNetAilMel1,391 chainNetAilMel1,522 chainNetAilMel1,712 chainNetAilMel1,1111 chainNetCanFam2,388 chainNetCanFam2,519 chainNetCanFam2,709 chainNetCanFam2,1108 chainNetHg19,388 chainNetHg19,519 chainNetHg19,709 chainNetHg19,1108 chainNetMm9,388 chainNetMm9,519 chainNetMm9,709 chainNetMm9,1108 chainNetMonDom5,388 chainNetMonDom5,519 chainNetMonDom5,709 chainNetMonDom5,1108 cons6way,292 cons6way,514 cons6way,2183 cons6way,2208 cons6way,2448 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 est,788 intronEst,872 mrna,505 netAilMel1,388 netAilMel1,519 netAilMel1,709 netAilMel1,1108 netCanFam2,385 netCanFam2,516 netCanFam2,706 netCanFam2,1105 netHg19,385 netHg19,516 netHg19,706 netHg19,1105 netMm9,385 netMm9,516 netMm9,706 netMm9,1105 netMonDom5,385 netMonDom5,516 netMonDom5,706 netMonDom5,1105 nscanGene,213 nscanGene,240 refGene,419 tRNAs,93 tRNAs,462 xenoRefGene,384 1.0 chainAilMel1,7 chainAilMel1,70 chainAilMel1,305 chainNetAilMel1,8 chainNetAilMel1,73 chainNetAilMel1,308 chainNetAilMel1Viewchain,6 chainNetAilMel1Viewnet,6 netAilMel1,7 netAilMel1,70 netAilMel1,305 1.9x gold,57 100 augustusGene,134 chainAilMel1,1076 chainCanFam2,1073 chainHg19,1073 chainMm9,1073 chainMonDom5,1073 chainNetAilMel1,1079 chainNetCanFam2,1076 chainNetHg19,1076 chainNetMm9,1076 chainNetMonDom5,1076 cons6way,2337 microsat,70 nestedRepeats,230 netAilMel1,1076 netCanFam2,1073 netHg19,1073 netMm9,1073 netMonDom5,1073 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainAilMel1,748 chainCanFam2,745 chainHg19,745 chainMm9,745 chainNetAilMel1,751 chainNetCanFam2,748 chainNetHg19,748 chainNetMm9,748 cons6way,1967 nestedRepeats,238 netAilMel1,748 netCanFam2,745 netHg19,745 netMm9,745 1000-2000 augustusGene,161 103-7 chainAilMel1,1109 chainCanFam2,1106 chainHg19,1106 chainMm9,1106 chainMonDom5,1106 chainNetAilMel1,1112 chainNetCanFam2,1109 chainNetHg19,1109 chainNetMm9,1109 chainNetMonDom5,1109 cons6way,2449 netAilMel1,1109 netCanFam2,1106 netHg19,1106 netMm9,1106 netMonDom5,1106 1034-50 cons6way,2252 10607616 nestedRepeats,394 rmsk,417 10703 gap,25 gold,24 10973072 nestedRepeats,361 rmsk,384 11 chainAilMel1,705 chainAilMel1,712 chainCanFam2,702 chainCanFam2,709 chainHg19,702 chainHg19,709 chainMm9,702 chainMm9,709 chainMonDom5,702 chainMonDom5,709 chainNetAilMel1,708 chainNetAilMel1,715 chainNetCanFam2,705 chainNetCanFam2,712 chainNetHg19,705 chainNetHg19,712 chainNetMm9,705 chainNetMm9,712 chainNetMonDom5,705 chainNetMonDom5,712 netAilMel1,705 netAilMel1,712 netCanFam2,702 netCanFam2,709 netHg19,702 netHg19,709 netMm9,702 netMm9,709 netMonDom5,702 netMonDom5,709 tRNAs,409 tRNAs,411 tRNAs,505 110-21 cons6way,2209 1100 chainMonDom5,723 chainMonDom5,735 chainNetMonDom5,726 chainNetMonDom5,738 netMonDom5,723 netMonDom5,735 111 chainAilMel1,707 chainAilMel1,713 chainCanFam2,704 chainCanFam2,710 chainHg19,704 chainHg19,710 chainMm9,704 chainMm9,710 chainMonDom5,704 chainMonDom5,710 chainNetAilMel1,710 chainNetAilMel1,716 chainNetCanFam2,707 chainNetCanFam2,713 chainNetHg19,707 chainNetHg19,713 chainNetMm9,707 chainNetMm9,713 chainNetMonDom5,707 chainNetMonDom5,713 netAilMel1,707 netAilMel1,713 netCanFam2,704 netCanFam2,710 netHg19,704 netHg19,710 netMm9,704 netMm9,710 netMonDom5,704 netMonDom5,710 11473003 nscanGene,243 11484-9 chainAilMel1,1078 chainCanFam2,1075 chainHg19,1075 chainMm9,1075 chainMonDom5,1075 chainNetAilMel1,1081 chainNetCanFam2,1078 chainNetHg19,1078 chainNetMm9,1078 chainNetMonDom5,1078 cons6way,2339 netAilMel1,1078 netCanFam2,1075 netHg19,1075 netMm9,1075 netMonDom5,1075 115-26 chainAilMel1,1040 chainCanFam2,1037 chainHg19,1037 chainMm9,1037 chainMonDom5,1037 chainNetAilMel1,1043 chainNetCanFam2,1040 chainNetHg19,1040 chainNetMm9,1040 chainNetMonDom5,1040 cons6way,2405 netAilMel1,1040 netCanFam2,1037 netHg19,1037 netMm9,1037 netMonDom5,1037 11743200 cons6way,2498 117900 chainAilMel1,729 chainAilMel1,741 chainCanFam2,726 chainCanFam2,738 chainHg19,726 chainHg19,738 chainMm9,726 chainMm9,738 chainNetAilMel1,732 chainNetAilMel1,744 chainNetCanFam2,729 chainNetCanFam2,741 chainNetHg19,729 chainNetHg19,741 chainNetMm9,729 chainNetMm9,741 netAilMel1,729 netAilMel1,741 netCanFam2,726 netCanFam2,738 netHg19,726 netHg19,738 netMm9,726 netMm9,738 118300 chainAilMel1,753 chainCanFam2,750 chainHg19,750 chainMm9,750 chainNetAilMel1,756 chainNetCanFam2,753 chainNetHg19,753 chainNetMm9,753 netAilMel1,753 netCanFam2,750 netHg19,750 netMm9,750 11928468 chainAilMel1,1042 chainCanFam2,1039 chainHg19,1039 chainMm9,1039 chainMonDom5,1039 chainNetAilMel1,1045 chainNetCanFam2,1042 chainNetHg19,1042 chainNetMm9,1042 chainNetMonDom5,1042 cons6way,2407 netAilMel1,1042 netCanFam2,1039 netHg19,1039 netMm9,1039 netMonDom5,1039 11932250 est,812 intronEst,896 mrna,529 refGene,349 xenoRefGene,314 12 est,808 intronEst,892 mrna,525 refGene,345 xenoRefGene,310 12111 chainAilMel1,715 chainCanFam2,712 chainHg19,712 chainMm9,712 chainMonDom5,712 chainNetAilMel1,718 chainNetCanFam2,715 chainNetHg19,715 chainNetMm9,715 chainNetMonDom5,715 netAilMel1,715 netCanFam2,712 netHg19,712 netMm9,712 netMonDom5,712 1247-56 tRNAs,508 12529312 chainAilMel1,1111 chainCanFam2,1108 chainHg19,1108 chainMm9,1108 chainMonDom5,1108 chainNetAilMel1,1114 chainNetCanFam2,1111 chainNetHg19,1111 chainNetMm9,1111 chainNetMonDom5,1111 cons6way,2451 netAilMel1,1111 netCanFam2,1108 netHg19,1108 netMm9,1108 netMonDom5,1108 13 chainAilMel1,1107 chainCanFam2,1104 chainHg19,1104 chainMm9,1104 chainMonDom5,1104 chainNetAilMel1,1110 chainNetCanFam2,1107 chainNetHg19,1107 chainNetMm9,1107 chainNetMonDom5,1107 cons6way,36 cons6way,2182 cons6way,2447 netAilMel1,1107 netCanFam2,1104 netHg19,1104 netMm9,1104 netMonDom5,1104 nscanGene,170 1300 chainAilMel1,749 chainCanFam2,746 chainHg19,746 chainMm9,746 chainNetAilMel1,752 chainNetCanFam2,749 chainNetHg19,749 chainNetMm9,749 netAilMel1,749 netCanFam2,746 netHg19,746 netMm9,746 139 cons6way,2295 14 cons6way,2380 cons6way,2493 1400 chainMonDom5,747 chainNetMonDom5,750 netMonDom5,747 14500829 nscanGene,218 14500911 chainAilMel1,1080 chainCanFam2,1077 chainHg19,1077 chainMm9,1077 chainMonDom5,1077 chainNetAilMel1,1083 chainNetCanFam2,1080 chainNetHg19,1080 chainNetMm9,1080 chainNetMonDom5,1080 cons6way,2341 netAilMel1,1080 netCanFam2,1077 netHg19,1077 netMm9,1077 netMonDom5,1077 14534192 augustusGene,340 14681350 est,794 intronEst,878 mrna,511 15 cons6way,2250 microsat,30 microsat,79 microsat,130 refGene,267 simpleRepeat,90 tRNAs,95 xenoRefGene,233 15060014 cons6way,2384 152111 chainAilMel1,718 chainCanFam2,715 chainHg19,715 chainMm9,715 chainMonDom5,715 chainNetAilMel1,721 chainNetCanFam2,718 chainNetHg19,718 chainNetMm9,718 chainNetMonDom5,718 netAilMel1,718 netCanFam2,715 netHg19,715 netMm9,715 netMonDom5,715 15600 chainMonDom5,726 chainMonDom5,738 chainNetMonDom5,729 chainNetMonDom5,741 netMonDom5,726 netMonDom5,738 15608248 refGene,425 xenoRefGene,390 16 nestedRepeats,357 nscanGene,262 rmsk,380 16000 chainMonDom5,750 chainNetMonDom5,753 netMonDom5,750 16024819 cons6way,2254 16597247 nscanGene,174 16651666 nscanGene,266 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 nscanGene,238 18218656 augustusGene,315 1870126 tRNAs,439 18984615 tRNAs,391 19 augustusGene,335 nscanGene,215 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 19858363 cons6way,2211 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1988 tRNAs,350 1990 blastHg18KG,171 1991 tRNAs,432 1994 tRNAs,407 tRNAs,503 1995 cons6way,1657 cons6way,2293 1996 cons6way,1655 cons6way,2180 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1997 tRNAs,460 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 augustusGene,142 augustusGene,337 chainAilMel1,422 chainAilMel1,427 chainAilMel1,710 chainCanFam2,419 chainCanFam2,424 chainCanFam2,707 chainHg19,419 chainHg19,424 chainHg19,707 chainMm9,419 chainMm9,424 chainMm9,707 chainMonDom5,419 chainMonDom5,424 chainMonDom5,707 chainNetAilMel1,425 chainNetAilMel1,430 chainNetAilMel1,713 chainNetCanFam2,422 chainNetCanFam2,427 chainNetCanFam2,710 chainNetHg19,422 chainNetHg19,427 chainNetHg19,710 chainNetMm9,422 chainNetMm9,427 chainNetMm9,710 chainNetMonDom5,422 chainNetMonDom5,427 chainNetMonDom5,710 cons6way,1279 cons6way,1309 cons6way,2296 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 netAilMel1,422 netAilMel1,427 netAilMel1,710 netCanFam2,419 netCanFam2,424 netCanFam2,707 netHg19,419 netHg19,424 netHg19,707 netMm9,419 netMm9,424 netMm9,707 netMonDom5,419 netMonDom5,424 netMonDom5,707 nscanGene,171 simpleRepeat,92 2.8x gold,61 20 chainAilMel1,1077 chainCanFam2,1074 chainHg19,1074 chainMm9,1074 chainMonDom5,1074 chainNetAilMel1,1080 chainNetCanFam2,1077 chainNetHg19,1077 chainNetMm9,1077 chainNetMonDom5,1077 cons6way,2207 cons6way,2338 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netAilMel1,1077 netCanFam2,1074 netHg19,1074 netMm9,1074 netMonDom5,1074 tRNAs,123 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2001 cons6way,2142 cons6way,2491 nscanGene,237 2002 chainAilMel1,1039 chainCanFam2,1036 chainHg19,1036 chainMm9,1036 chainMonDom5,1036 chainNetAilMel1,1042 chainNetCanFam2,1039 chainNetHg19,1039 chainNetMm9,1039 chainNetMonDom5,1039 cons6way,2404 est,806 intronEst,890 mrna,523 netAilMel1,1039 netCanFam2,1036 netHg19,1036 netMm9,1036 netMonDom5,1036 refGene,343 xenoRefGene,308 2003 augustusGene,333 chainAilMel1,1073 chainAilMel1,1105 chainCanFam2,1070 chainCanFam2,1102 chainHg19,1070 chainHg19,1102 chainMm9,1070 chainMm9,1102 chainMonDom5,1070 chainMonDom5,1102 chainNetAilMel1,1076 chainNetAilMel1,1108 chainNetCanFam2,1073 chainNetCanFam2,1105 chainNetHg19,1073 chainNetHg19,1105 chainNetMm9,1073 chainNetMm9,1105 chainNetMonDom5,1073 chainNetMonDom5,1105 cons6way,2334 cons6way,2445 netAilMel1,1073 netAilMel1,1105 netCanFam2,1070 netCanFam2,1102 netHg19,1070 netHg19,1102 netMm9,1070 netMm9,1102 netMonDom5,1070 netMonDom5,1102 nscanGene,211 2004 cons6way,2378 est,786 intronEst,870 mrna,503 2005 chainCanFam2,5 chainCanFam2,67 chainCanFam2,301 chainNetCanFam2,6 chainNetCanFam2,70 chainNetCanFam2,304 chainNetCanFam2Viewchain,4 chainNetCanFam2Viewnet,4 cons6way,1661 cons6way,1792 cons6way,2248 cons6way,2277 netCanFam2,5 netCanFam2,67 netCanFam2,301 refGene,417 xenoRefGene,382 2005canfam2syntenic cons6way,489 2006 chainMonDom5,5 chainMonDom5,67 chainMonDom5,301 chainNetMonDom5,6 chainNetMonDom5,70 chainNetMonDom5,304 chainNetMonDom5Viewchain,4 chainNetMonDom5Viewnet,4 netMonDom5,5 netMonDom5,67 netMonDom5,301 nscanGene,168 nscanGene,260 2006mondom5syntenic cons6way,511 2007 chainAilMel1,1012 chainCanFam2,1009 chainHg19,1009 chainMm9,5 chainMm9,67 chainMm9,301 chainMm9,1009 chainMonDom5,1009 chainNetAilMel1,1015 chainNetCanFam2,1012 chainNetHg19,1012 chainNetMm9,6 chainNetMm9,70 chainNetMm9,304 chainNetMm9,1012 chainNetMm9Viewchain,4 chainNetMm9Viewnet,4 chainNetMonDom5,1012 cons6way,2154 cons6way,2422 netAilMel1,1012 netCanFam2,1009 netHg19,1009 netMm9,5 netMm9,67 netMm9,301 netMm9,1009 netMonDom5,1009 2007mm9syntenic cons6way,506 2008 augustusGene,308 gap,18 gold,17 2008felcat4reference cons6way,483 2009 chainAilMel1,5 chainAilMel1,68 chainAilMel1,303 chainHg19,5 chainHg19,67 chainHg19,301 chainNetAilMel1,6 chainNetAilMel1,71 chainNetAilMel1,306 chainNetAilMel1Viewchain,4 chainNetAilMel1Viewnet,4 chainNetHg19,6 chainNetHg19,70 chainNetHg19,304 chainNetHg19Viewchain,4 chainNetHg19Viewnet,4 cons6way,499 netAilMel1,5 netAilMel1,68 netAilMel1,303 netHg19,5 netHg19,67 netHg19,301 tRNAs,384 2009ailmel1reciprocal cons6way,494 2010 cons6way,2205 2013 est,761 intronEst,845 mrna,478 2014 refGene,384 xenoRefGene,349 2079-88 tRNAs,412 2111 chainAilMel1,714 chainCanFam2,711 chainHg19,711 chainMm9,711 chainMonDom5,711 chainNetAilMel1,717 chainNetCanFam2,714 chainNetHg19,714 chainNetMm9,714 chainNetMonDom5,714 netAilMel1,714 netCanFam2,711 netHg19,711 netMm9,711 netMonDom5,711 215 blastHg18KG,174 217900 chainAilMel1,730 chainAilMel1,742 chainCanFam2,727 chainCanFam2,739 chainHg19,727 chainHg19,739 chainMm9,727 chainMm9,739 chainNetAilMel1,733 chainNetAilMel1,745 chainNetCanFam2,730 chainNetCanFam2,742 chainNetHg19,730 chainNetHg19,742 chainNetMm9,730 chainNetMm9,742 netAilMel1,730 netAilMel1,742 netCanFam2,727 netCanFam2,739 netHg19,727 netHg19,739 netMm9,727 netMm9,739 218300 chainAilMel1,754 chainCanFam2,751 chainHg19,751 chainMm9,751 chainNetAilMel1,757 chainNetCanFam2,754 chainNetHg19,754 chainNetMm9,754 netAilMel1,754 netCanFam2,751 netHg19,751 netMm9,751 22 tRNAs,410 tRNAs,506 220 tRNAs,435 22900 chainAilMel1,727 chainAilMel1,739 chainCanFam2,724 chainCanFam2,736 chainHg19,724 chainHg19,736 chainMm9,724 chainMm9,736 chainNetAilMel1,730 chainNetAilMel1,742 chainNetCanFam2,727 chainNetCanFam2,739 chainNetHg19,727 chainNetHg19,739 chainNetMm9,727 chainNetMm9,739 netAilMel1,727 netAilMel1,739 netCanFam2,724 netCanFam2,736 netHg19,724 netHg19,736 netMm9,724 netMm9,736 23193287 est,768 intronEst,852 mrna,485 23300 chainAilMel1,751 chainCanFam2,748 chainHg19,748 chainMm9,748 chainNetAilMel1,754 chainNetCanFam2,751 chainNetHg19,751 chainNetMm9,751 netAilMel1,751 netCanFam2,748 netHg19,748 netMm9,748 2348-51 cons6way,2496 24 augustusGene,311 24259432 refGene,391 xenoRefGene,356 25 tRNAs,463 xenoRefGene,268 252111 chainAilMel1,719 chainCanFam2,716 chainHg19,716 chainMm9,716 chainMonDom5,716 chainNetAilMel1,722 chainNetCanFam2,719 chainNetHg19,719 chainNetMm9,719 chainNetMonDom5,719 netAilMel1,719 netCanFam2,716 netHg19,716 netMm9,716 netMonDom5,716 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 27 microsat,131 simpleRepeat,91 2900 chainAilMel1,726 chainAilMel1,738 chainCanFam2,723 chainCanFam2,735 chainHg19,723 chainHg19,735 chainMm9,723 chainMm9,735 chainNetAilMel1,729 chainNetAilMel1,741 chainNetCanFam2,726 chainNetCanFam2,738 chainNetHg19,726 chainNetHg19,738 chainNetMm9,726 chainNetMm9,738 netAilMel1,726 netAilMel1,738 netCanFam2,723 netCanFam2,735 netHg19,723 netHg19,735 netMm9,723 netMm9,735 294 cons6way,2494 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 augustusGene,140 blastHg18KG,175 chainAilMel1,434 chainAilMel1,711 chainCanFam2,431 chainCanFam2,708 chainHg19,431 chainHg19,708 chainMm9,431 chainMm9,708 chainMonDom5,431 chainMonDom5,708 chainNetAilMel1,437 chainNetAilMel1,714 chainNetCanFam2,434 chainNetCanFam2,711 chainNetHg19,434 chainNetHg19,711 chainNetMm9,434 chainNetMm9,711 chainNetMonDom5,434 chainNetMonDom5,711 cons6way,1079 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 est,478 est,531 est,585 intronEst,112 intronEst,559 intronEst,612 intronEst,666 microsat,68 netAilMel1,434 netAilMel1,711 netCanFam2,431 netCanFam2,708 netHg19,431 netHg19,708 netMm9,431 netMm9,708 netMonDom5,431 netMonDom5,708 tRNAs,436 3.1 augustusGene,24 30 chainAilMel1,1075 chainCanFam2,1072 chainHg19,1072 chainMm9,1072 chainMonDom5,1072 chainNetAilMel1,1078 chainNetCanFam2,1075 chainNetHg19,1075 chainNetMm9,1075 chainNetMonDom5,1075 cons6way,733 cons6way,2336 netAilMel1,1075 netCanFam2,1072 netHg19,1072 netMm9,1072 netMonDom5,1072 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainAilMel1,683 chainCanFam2,680 chainHg19,680 chainMm9,680 chainNetAilMel1,686 chainNetCanFam2,683 chainNetHg19,683 chainNetMm9,683 netAilMel1,683 netCanFam2,680 netHg19,680 netMm9,680 31 nscanGene,214 31600 chainMonDom5,727 chainMonDom5,739 chainNetMonDom5,730 chainNetMonDom5,742 netMonDom5,727 netMonDom5,739 317900 chainAilMel1,731 chainAilMel1,743 chainCanFam2,728 chainCanFam2,740 chainHg19,728 chainHg19,740 chainMm9,728 chainMm9,740 chainNetAilMel1,734 chainNetAilMel1,746 chainNetCanFam2,731 chainNetCanFam2,743 chainNetHg19,731 chainNetHg19,743 chainNetMm9,731 chainNetMm9,743 netAilMel1,731 netAilMel1,743 netCanFam2,728 netCanFam2,740 netHg19,728 netHg19,740 netMm9,728 netMm9,740 318300 chainAilMel1,755 chainCanFam2,752 chainHg19,752 chainMm9,752 chainNetAilMel1,758 chainNetCanFam2,755 chainNetHg19,755 chainNetMm9,755 netAilMel1,755 netCanFam2,752 netHg19,752 netMm9,752 32 est,789 intronEst,82 intronEst,873 mrna,506 32000 chainMonDom5,751 chainNetMonDom5,754 netMonDom5,751 32111 chainAilMel1,716 chainCanFam2,713 chainHg19,713 chainMm9,713 chainMonDom5,713 chainNetAilMel1,719 chainNetCanFam2,716 chainNetHg19,716 chainNetMm9,716 chainNetMonDom5,716 netAilMel1,716 netCanFam2,713 netHg19,713 netMm9,713 netMonDom5,713 325 chainMonDom5,718 chainMonDom5,730 chainNetMonDom5,721 chainNetMonDom5,733 netMonDom5,718 netMonDom5,730 325-351 cons6way,2279 33 refGene,420 xenoRefGene,385 3300 chainAilMel1,750 chainCanFam2,747 chainHg19,747 chainMm9,747 chainNetAilMel1,753 chainNetCanFam2,750 chainNetHg19,750 chainNetMm9,750 netAilMel1,750 netCanFam2,747 netHg19,747 netMm9,747 350 chainAilMel1,721 chainAilMel1,733 chainCanFam2,718 chainCanFam2,730 chainHg19,718 chainHg19,730 chainMm9,718 chainMm9,730 chainNetAilMel1,724 chainNetAilMel1,736 chainNetCanFam2,721 chainNetCanFam2,733 chainNetHg19,721 chainNetHg19,733 chainNetMm9,721 chainNetMm9,733 netAilMel1,721 netAilMel1,733 netCanFam2,718 netCanFam2,730 netHg19,718 netHg19,730 netMm9,718 netMm9,730 360 chainMonDom5,719 chainMonDom5,731 chainNetMonDom5,722 chainNetMonDom5,734 netMonDom5,719 netMonDom5,731 3600 chainMonDom5,724 chainMonDom5,736 chainNetMonDom5,727 chainNetMonDom5,739 netMonDom5,724 netMonDom5,736 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 37 tRNAs,386 3730 gold,39 379-93 nscanGene,172 4 cons6way,2381 est,809 intronEst,893 mrna,526 refGene,346 xenoRefGene,311 4-fold cons6way,1583 400 chainMonDom5,720 chainMonDom5,732 chainNetMonDom5,723 chainNetMonDom5,735 netMonDom5,720 netMonDom5,732 4000 chainMonDom5,748 chainNetMonDom5,751 netMonDom5,748 403-410 blastHg18KG,176 41 est,763 intronEst,847 mrna,480 418-420 nestedRepeats,359 rmsk,382 42 refGene,386 xenoRefGene,351 425 chainAilMel1,722 chainAilMel1,734 chainCanFam2,719 chainCanFam2,731 chainHg19,719 chainHg19,731 chainMm9,719 chainMm9,731 chainNetAilMel1,725 chainNetAilMel1,737 chainNetCanFam2,722 chainNetCanFam2,734 chainNetHg19,722 chainNetHg19,734 chainNetMm9,722 chainNetMm9,734 netAilMel1,722 netAilMel1,734 netCanFam2,719 netCanFam2,731 netHg19,719 netHg19,731 netMm9,719 netMm9,731 45 cons6way,1799 tRNAs,180 45-60 tRNAs,200 450 chainAilMel1,723 chainAilMel1,735 chainCanFam2,720 chainCanFam2,732 chainHg19,720 chainHg19,732 chainMm9,720 chainMm9,732 chainMonDom5,721 chainMonDom5,733 chainNetAilMel1,726 chainNetAilMel1,738 chainNetCanFam2,723 chainNetCanFam2,735 chainNetHg19,723 chainNetHg19,735 chainNetMm9,723 chainNetMm9,735 chainNetMonDom5,724 chainNetMonDom5,736 netAilMel1,723 netAilMel1,735 netCanFam2,720 netCanFam2,732 netHg19,720 netHg19,732 netMm9,720 netMm9,732 netMonDom5,721 netMonDom5,733 4d cons6way,1593 5 augustusGene,312 blastHg18KG,173 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 est,475 est,516 est,542 gap,129 gap,144 intronEst,556 intronEst,597 intronEst,623 nscanGene,263 tRNAs,434 tRNAs,464 5-base gc5Base,6 gc5Base,27 50 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 500 est,32 intronEst,44 5000 chainMonDom5,680 chainNetMonDom5,683 netMonDom5,680 5550 cons6way,2495 5654-66 nscanGene,216 56600 chainMonDom5,728 chainMonDom5,740 chainNetMonDom5,731 chainNetMonDom5,743 netMonDom5,728 netMonDom5,740 57000 chainMonDom5,752 chainNetMonDom5,755 netMonDom5,752 573-80 microsat,133 simpleRepeat,93 57900 chainAilMel1,728 chainAilMel1,740 chainCanFam2,725 chainCanFam2,737 chainHg19,725 chainHg19,737 chainMm9,725 chainMm9,737 chainNetAilMel1,731 chainNetAilMel1,743 chainNetCanFam2,728 chainNetCanFam2,740 chainNetHg19,728 chainNetHg19,740 chainNetMm9,728 chainNetMm9,740 netAilMel1,728 netAilMel1,740 netCanFam2,725 netCanFam2,737 netHg19,725 netHg19,737 netMm9,725 netMm9,737 58300 chainAilMel1,752 chainCanFam2,749 chainHg19,749 chainMm9,749 chainNetAilMel1,755 chainNetCanFam2,752 chainNetHg19,752 chainNetMm9,752 netAilMel1,752 netCanFam2,749 netHg19,749 netMm9,749 6 cons6way,5 cons6way,16 cons6wayViewalign,6 cons6wayViewelements,6 cons6wayViewphastcons,7 cons6wayViewphyloP,7 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 gold,46 multiz6way,6 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 phastCons6way,1 phastConsElements6way,1 phyloP6way,1 rmsk,414 rmsk,435 rmsk,436 6-way cons6way,520 60 blastHg18KG,107 blastHg18KG,119 blastHg18KG,127 60.0 tRNAs,166 600 chainAilMel1,724 chainAilMel1,736 chainCanFam2,721 chainCanFam2,733 chainHg19,721 chainHg19,733 chainMm9,721 chainMm9,733 chainMonDom5,722 chainMonDom5,734 chainNetAilMel1,727 chainNetAilMel1,739 chainNetCanFam2,724 chainNetCanFam2,736 chainNetHg19,724 chainNetHg19,736 chainNetMm9,724 chainNetMm9,736 chainNetMonDom5,725 chainNetMonDom5,737 netAilMel1,724 netAilMel1,736 netCanFam2,721 netCanFam2,733 netHg19,721 netHg19,733 netMm9,721 netMm9,733 netMonDom5,722 netMonDom5,734 625 chainMonDom5,742 chainNetMonDom5,745 netMonDom5,742 637-44 augustusGene,313 656-64 est,810 intronEst,894 mrna,527 refGene,347 xenoRefGene,312 657-63 nestedRepeats,392 rmsk,415 659-71 tRNAs,437 660 chainMonDom5,743 chainNetMonDom5,746 netMonDom5,743 678-85 nscanGene,264 6way cons6way,1589 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 tRNAs,507 700 chainMonDom5,744 chainNetMonDom5,747 netMonDom5,744 708-15 cons6way,2382 72111 chainAilMel1,717 chainCanFam2,714 chainHg19,714 chainMm9,714 chainMonDom5,714 chainNetAilMel1,720 chainNetCanFam2,717 chainNetHg19,717 chainNetMm9,717 chainNetMonDom5,717 netAilMel1,717 netCanFam2,714 netHg19,714 netMm9,714 netMonDom5,714 743-8 nestedRepeats,414 rmsk,437 750 chainAilMel1,745 chainCanFam2,742 chainHg19,742 chainMm9,742 chainMonDom5,745 chainNetAilMel1,748 chainNetCanFam2,745 chainNetHg19,745 chainNetMm9,745 chainNetMonDom5,748 est,664 intronEst,745 netAilMel1,745 netCanFam2,742 netHg19,742 netMm9,742 netMonDom5,745 7600 chainMonDom5,725 chainMonDom5,737 chainNetMonDom5,728 chainNetMonDom5,740 netMonDom5,725 netMonDom5,737 7713447 cons6way,2299 8 cons6way,2251 8000 chainMonDom5,749 chainNetMonDom5,752 netMonDom5,749 8029015 tRNAs,414 8165140 tRNAs,510 825 chainAilMel1,746 chainCanFam2,743 chainHg19,743 chainMm9,743 chainNetAilMel1,749 chainNetCanFam2,746 chainNetHg19,746 chainNetMm9,746 netAilMel1,746 netCanFam2,743 netHg19,743 netMm9,743 850 chainAilMel1,747 chainCanFam2,744 chainHg19,744 chainMm9,744 chainNetAilMel1,750 chainNetCanFam2,747 chainNetHg19,747 chainNetMm9,747 netAilMel1,747 netCanFam2,744 netHg19,744 netMm9,744 8583911 cons6way,2186 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 900 chainAilMel1,725 chainAilMel1,737 chainCanFam2,722 chainCanFam2,734 chainHg19,722 chainHg19,734 chainMm9,722 chainMm9,734 chainMonDom5,746 chainNetAilMel1,728 chainNetAilMel1,740 chainNetCanFam2,725 chainNetCanFam2,737 chainNetHg19,725 chainNetHg19,737 chainNetMm9,725 chainNetMm9,737 chainNetMonDom5,749 netAilMel1,725 netAilMel1,737 netCanFam2,722 netCanFam2,734 netHg19,722 netHg19,734 netMm9,722 netMm9,734 netMonDom5,746 9023104 tRNAs,467 93-104 cons6way,2184 955-64 tRNAs,465 96 est,712 intronEst,793 mrna,428 refGene,302 9862982 microsat,135 simpleRepeat,95 99-100 tRNAs,81 993-1005 cons6way,2297 a augustusGene,116 augustusGene,128 augustusGene,152 augustusGene,215 augustusGene,218 augustusGene,233 augustusGene,323 augustusGene,328 chainAilMel1,77 chainAilMel1,146 chainAilMel1,198 chainAilMel1,454 chainAilMel1,464 chainAilMel1,468 chainAilMel1,535 chainAilMel1,552 chainAilMel1,555 chainAilMel1,621 chainAilMel1,626 chainAilMel1,631 chainAilMel1,635 chainAilMel1,646 chainAilMel1,678 chainAilMel1,797 chainAilMel1,811 chainAilMel1,817 chainAilMel1,823 chainAilMel1,827 chainAilMel1,830 chainAilMel1,858 chainAilMel1,1048 chainAilMel1,1072 chainAilMel1,1088 chainCanFam2,75 chainCanFam2,144 chainCanFam2,196 chainCanFam2,451 chainCanFam2,461 chainCanFam2,465 chainCanFam2,532 chainCanFam2,549 chainCanFam2,552 chainCanFam2,618 chainCanFam2,623 chainCanFam2,628 chainCanFam2,632 chainCanFam2,643 chainCanFam2,675 chainCanFam2,794 chainCanFam2,808 chainCanFam2,814 chainCanFam2,820 chainCanFam2,824 chainCanFam2,827 chainCanFam2,855 chainCanFam2,1045 chainCanFam2,1069 chainCanFam2,1085 chainHg19,75 chainHg19,144 chainHg19,196 chainHg19,451 chainHg19,461 chainHg19,465 chainHg19,532 chainHg19,549 chainHg19,552 chainHg19,618 chainHg19,623 chainHg19,628 chainHg19,632 chainHg19,643 chainHg19,675 chainHg19,794 chainHg19,808 chainHg19,814 chainHg19,820 chainHg19,824 chainHg19,827 chainHg19,855 chainHg19,1045 chainHg19,1069 chainHg19,1085 chainMm9,75 chainMm9,144 chainMm9,196 chainMm9,451 chainMm9,461 chainMm9,465 chainMm9,532 chainMm9,549 chainMm9,552 chainMm9,618 chainMm9,623 chainMm9,628 chainMm9,632 chainMm9,643 chainMm9,675 chainMm9,794 chainMm9,808 chainMm9,814 chainMm9,820 chainMm9,824 chainMm9,827 chainMm9,855 chainMm9,1045 chainMm9,1069 chainMm9,1085 chainMonDom5,75 chainMonDom5,144 chainMonDom5,196 chainMonDom5,451 chainMonDom5,461 chainMonDom5,465 chainMonDom5,532 chainMonDom5,549 chainMonDom5,552 chainMonDom5,618 chainMonDom5,623 chainMonDom5,628 chainMonDom5,632 chainMonDom5,643 chainMonDom5,675 chainMonDom5,794 chainMonDom5,808 chainMonDom5,814 chainMonDom5,820 chainMonDom5,824 chainMonDom5,827 chainMonDom5,855 chainMonDom5,1045 chainMonDom5,1069 chainMonDom5,1085 chainNetAilMel1,80 chainNetAilMel1,149 chainNetAilMel1,201 chainNetAilMel1,457 chainNetAilMel1,467 chainNetAilMel1,471 chainNetAilMel1,538 chainNetAilMel1,555 chainNetAilMel1,558 chainNetAilMel1,624 chainNetAilMel1,629 chainNetAilMel1,634 chainNetAilMel1,638 chainNetAilMel1,649 chainNetAilMel1,681 chainNetAilMel1,800 chainNetAilMel1,814 chainNetAilMel1,820 chainNetAilMel1,826 chainNetAilMel1,830 chainNetAilMel1,833 chainNetAilMel1,861 chainNetAilMel1,1051 chainNetAilMel1,1075 chainNetAilMel1,1091 chainNetCanFam2,78 chainNetCanFam2,147 chainNetCanFam2,199 chainNetCanFam2,454 chainNetCanFam2,464 chainNetCanFam2,468 chainNetCanFam2,535 chainNetCanFam2,552 chainNetCanFam2,555 chainNetCanFam2,621 chainNetCanFam2,626 chainNetCanFam2,631 chainNetCanFam2,635 chainNetCanFam2,646 chainNetCanFam2,678 chainNetCanFam2,797 chainNetCanFam2,811 chainNetCanFam2,817 chainNetCanFam2,823 chainNetCanFam2,827 chainNetCanFam2,830 chainNetCanFam2,858 chainNetCanFam2,1048 chainNetCanFam2,1072 chainNetCanFam2,1088 chainNetHg19,78 chainNetHg19,147 chainNetHg19,199 chainNetHg19,454 chainNetHg19,464 chainNetHg19,468 chainNetHg19,535 chainNetHg19,552 chainNetHg19,555 chainNetHg19,621 chainNetHg19,626 chainNetHg19,631 chainNetHg19,635 chainNetHg19,646 chainNetHg19,678 chainNetHg19,797 chainNetHg19,811 chainNetHg19,817 chainNetHg19,823 chainNetHg19,827 chainNetHg19,830 chainNetHg19,858 chainNetHg19,1048 chainNetHg19,1072 chainNetHg19,1088 chainNetMm9,78 chainNetMm9,147 chainNetMm9,199 chainNetMm9,454 chainNetMm9,464 chainNetMm9,468 chainNetMm9,535 chainNetMm9,552 chainNetMm9,555 chainNetMm9,621 chainNetMm9,626 chainNetMm9,631 chainNetMm9,635 chainNetMm9,646 chainNetMm9,678 chainNetMm9,797 chainNetMm9,811 chainNetMm9,817 chainNetMm9,823 chainNetMm9,827 chainNetMm9,830 chainNetMm9,858 chainNetMm9,1048 chainNetMm9,1072 chainNetMm9,1088 chainNetMonDom5,78 chainNetMonDom5,147 chainNetMonDom5,199 chainNetMonDom5,454 chainNetMonDom5,464 chainNetMonDom5,468 chainNetMonDom5,535 chainNetMonDom5,552 chainNetMonDom5,555 chainNetMonDom5,621 chainNetMonDom5,626 chainNetMonDom5,631 chainNetMonDom5,635 chainNetMonDom5,646 chainNetMonDom5,678 chainNetMonDom5,797 chainNetMonDom5,811 chainNetMonDom5,817 chainNetMonDom5,823 chainNetMonDom5,827 chainNetMonDom5,830 chainNetMonDom5,858 chainNetMonDom5,1048 chainNetMonDom5,1072 chainNetMonDom5,1088 cons6way,79 cons6way,93 cons6way,130 cons6way,136 cons6way,271 cons6way,581 cons6way,602 cons6way,643 cons6way,652 cons6way,725 cons6way,764 cons6way,788 cons6way,800 cons6way,907 cons6way,916 cons6way,929 cons6way,938 cons6way,961 cons6way,967 cons6way,978 cons6way,981 cons6way,985 cons6way,994 cons6way,1076 cons6way,1080 cons6way,1108 cons6way,1342 cons6way,1359 cons6way,1530 cons6way,1552 cons6way,1619 cons6way,1621 cons6way,1638 cons6way,1664 cons6way,1668 cons6way,1674 cons6way,1716 cons6way,1726 cons6way,1761 cons6way,1851 cons6way,1869 cons6way,1931 cons6way,1973 cons6way,1979 cons6way,2164 cons6way,2194 cons6way,2215 cons6way,2258 cons6way,2282 cons6way,2309 cons6way,2333 cons6way,2428 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 est,115 est,132 est,167 est,193 est,266 est,385 est,465 est,469 est,595 est,621 est,629 est,681 est,700 gap,84 gap,88 gc5Base,44 gold,125 gold,131 intronEst,115 intronEst,148 intronEst,196 intronEst,213 intronEst,248 intronEst,274 intronEst,347 intronEst,466 intronEst,546 intronEst,550 intronEst,676 intronEst,702 intronEst,710 intronEst,762 intronEst,781 microsat,53 microsat,119 mrna,61 mrna,78 mrna,113 mrna,139 mrna,212 mrna,331 mrna,397 mrna,416 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netAilMel1,77 netAilMel1,146 netAilMel1,198 netAilMel1,454 netAilMel1,464 netAilMel1,468 netAilMel1,535 netAilMel1,552 netAilMel1,555 netAilMel1,621 netAilMel1,626 netAilMel1,631 netAilMel1,635 netAilMel1,646 netAilMel1,678 netAilMel1,797 netAilMel1,811 netAilMel1,817 netAilMel1,823 netAilMel1,827 netAilMel1,830 netAilMel1,858 netAilMel1,1048 netAilMel1,1072 netAilMel1,1088 netCanFam2,75 netCanFam2,144 netCanFam2,196 netCanFam2,451 netCanFam2,461 netCanFam2,465 netCanFam2,532 netCanFam2,549 netCanFam2,552 netCanFam2,618 netCanFam2,623 netCanFam2,628 netCanFam2,632 netCanFam2,643 netCanFam2,675 netCanFam2,794 netCanFam2,808 netCanFam2,814 netCanFam2,820 netCanFam2,824 netCanFam2,827 netCanFam2,855 netCanFam2,1045 netCanFam2,1069 netCanFam2,1085 netHg19,75 netHg19,144 netHg19,196 netHg19,451 netHg19,461 netHg19,465 netHg19,532 netHg19,549 netHg19,552 netHg19,618 netHg19,623 netHg19,628 netHg19,632 netHg19,643 netHg19,675 netHg19,794 netHg19,808 netHg19,814 netHg19,820 netHg19,824 netHg19,827 netHg19,855 netHg19,1045 netHg19,1069 netHg19,1085 netMm9,75 netMm9,144 netMm9,196 netMm9,451 netMm9,461 netMm9,465 netMm9,532 netMm9,549 netMm9,552 netMm9,618 netMm9,623 netMm9,628 netMm9,632 netMm9,643 netMm9,675 netMm9,794 netMm9,808 netMm9,814 netMm9,820 netMm9,824 netMm9,827 netMm9,855 netMm9,1045 netMm9,1069 netMm9,1085 netMonDom5,75 netMonDom5,144 netMonDom5,196 netMonDom5,451 netMonDom5,461 netMonDom5,465 netMonDom5,532 netMonDom5,549 netMonDom5,552 netMonDom5,618 netMonDom5,623 netMonDom5,628 netMonDom5,632 netMonDom5,643 netMonDom5,675 netMonDom5,794 netMonDom5,808 netMonDom5,814 netMonDom5,820 netMonDom5,824 netMonDom5,827 netMonDom5,855 netMonDom5,1045 netMonDom5,1069 netMonDom5,1085 nscanGene,50 refGene,271 refGene,290 refGene,361 refGene,404 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 simpleRepeat,79 tRNAs,35 tRNAs,59 tRNAs,68 tRNAs,86 tRNAs,120 tRNAs,131 tRNAs,144 tRNAs,253 tRNAs,310 tRNAs,371 tRNAs,445 tRNAs,471 tRNAs,475 tRNAs,491 xenoRefGene,237 xenoRefGene,256 xenoRefGene,326 xenoRefGene,369 a91-114-31-123 chainAilMel1,671 chainCanFam2,668 chainHg19,668 chainMm9,668 chainMonDom5,668 chainNetAilMel1,674 chainNetCanFam2,671 chainNetHg19,671 chainNetMm9,671 chainNetMonDom5,671 netAilMel1,671 netCanFam2,668 netHg19,668 netMm9,668 netMonDom5,668 aaron nscanGene,135 ab augustusGene,3 augustusGene,16 abbreviated chainAilMel1,584 chainCanFam2,581 chainHg19,581 chainMm9,581 chainMonDom5,581 chainNetAilMel1,587 chainNetCanFam2,584 chainNetHg19,584 chainNetMm9,584 chainNetMonDom5,584 netAilMel1,584 netCanFam2,581 netHg19,581 netMm9,581 netMonDom5,581 abi gold,38 about chainAilMel1,460 chainAilMel1,473 chainAilMel1,847 chainCanFam2,457 chainCanFam2,470 chainCanFam2,844 chainHg19,457 chainHg19,470 chainHg19,844 chainMm9,457 chainMm9,470 chainMm9,844 chainMonDom5,457 chainMonDom5,470 chainMonDom5,844 chainNetAilMel1,463 chainNetAilMel1,476 chainNetAilMel1,850 chainNetCanFam2,460 chainNetCanFam2,473 chainNetCanFam2,847 chainNetHg19,460 chainNetHg19,473 chainNetHg19,847 chainNetMm9,460 chainNetMm9,473 chainNetMm9,847 chainNetMonDom5,460 chainNetMonDom5,473 chainNetMonDom5,847 cons6way,721 cons6way,1405 cons6way,1783 est,31 est,411 intronEst,43 intronEst,492 microsat,98 mrna,348 netAilMel1,460 netAilMel1,473 netAilMel1,847 netCanFam2,457 netCanFam2,470 netCanFam2,844 netHg19,457 netHg19,470 netHg19,844 netMm9,457 netMm9,470 netMm9,844 netMonDom5,457 netMonDom5,470 netMonDom5,844 refGene,210 simpleRepeat,59 xenoRefGene,176 above chainAilMel1,532 chainAilMel1,544 chainAilMel1,564 chainCanFam2,529 chainCanFam2,541 chainCanFam2,561 chainHg19,529 chainHg19,541 chainHg19,561 chainMm9,529 chainMm9,541 chainMm9,561 chainMonDom5,529 chainMonDom5,541 chainMonDom5,561 chainNetAilMel1,535 chainNetAilMel1,547 chainNetAilMel1,567 chainNetCanFam2,532 chainNetCanFam2,544 chainNetCanFam2,564 chainNetHg19,532 chainNetHg19,544 chainNetHg19,564 chainNetMm9,532 chainNetMm9,544 chainNetMm9,564 chainNetMonDom5,532 chainNetMonDom5,544 chainNetMonDom5,564 cons6way,1442 nestedRepeats,218 netAilMel1,532 netAilMel1,544 netAilMel1,564 netCanFam2,529 netCanFam2,541 netCanFam2,561 netHg19,529 netHg19,541 netHg19,561 netMm9,529 netMm9,541 netMm9,561 netMonDom5,529 netMonDom5,541 netMonDom5,561 tRNAs,122 absolute cons6way,262 abundance chainAilMel1,180 chainCanFam2,178 chainHg19,178 chainMm9,178 chainMonDom5,178 chainNetAilMel1,183 chainNetCanFam2,181 chainNetHg19,181 chainNetMm9,181 chainNetMonDom5,181 netAilMel1,180 netCanFam2,178 netHg19,178 netMm9,178 netMonDom5,178 acad chainAilMel1,1068 chainCanFam2,1065 chainHg19,1065 chainMm9,1065 chainMonDom5,1065 chainNetAilMel1,1071 chainNetCanFam2,1068 chainNetHg19,1068 chainNetMm9,1068 chainNetMonDom5,1068 cons6way,2329 netAilMel1,1068 netCanFam2,1065 netHg19,1065 netMm9,1065 netMonDom5,1065 acbe0100000 gap,27 acceleration cons6way,214 cons6way,1820 cons6way,1885 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 accession gap,26 gold,25 refGene,150 refGene,162 xenoRefGene,116 xenoRefGene,128 according augustusGene,114 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 accordingly tRNAs,281 acgt chainAilMel1,670 chainCanFam2,667 chainHg19,667 chainMm9,667 chainMonDom5,667 chainNetAilMel1,673 chainNetCanFam2,670 chainNetHg19,670 chainNetMm9,670 chainNetMonDom5,670 netAilMel1,670 netCanFam2,667 netHg19,667 netMm9,667 netMonDom5,667 acid blastHg18KG,63 acids blastHg18KG,133 est,759 est,784 intronEst,843 intronEst,868 microsat,126 mrna,476 mrna,501 nscanGene,209 refGene,382 refGene,415 simpleRepeat,86 tRNAs,382 tRNAs,405 tRNAs,458 tRNAs,501 xenoRefGene,347 xenoRefGene,380 adam cons6way,416 cons6way,2071 add cons6way,1453 gold,42 added chainAilMel1,594 chainCanFam2,591 chainHg19,591 chainMm9,591 chainMonDom5,591 chainNetAilMel1,597 chainNetCanFam2,594 chainNetHg19,594 chainNetMm9,594 chainNetMonDom5,594 nestedRepeats,147 netAilMel1,594 netCanFam2,591 netHg19,591 netMm9,591 netMonDom5,591 additional cons6way,348 nestedRepeats,288 rmsk,295 additions refGene,53 adjacent cons6way,1742 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 advice chainAilMel1,933 chainAilMel1,965 chainCanFam2,930 chainCanFam2,962 chainHg19,930 chainHg19,962 chainMm9,930 chainMm9,962 chainMonDom5,930 chainMonDom5,962 chainNetAilMel1,936 chainNetAilMel1,968 chainNetCanFam2,933 chainNetCanFam2,965 chainNetHg19,933 chainNetHg19,965 chainNetMm9,933 chainNetMm9,965 chainNetMonDom5,933 chainNetMonDom5,965 netAilMel1,933 netAilMel1,965 netCanFam2,930 netCanFam2,962 netHg19,930 netHg19,962 netMm9,930 netMm9,962 netMonDom5,930 netMonDom5,962 af cons6way,2354 nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 affine chainAilMel1,87 chainCanFam2,85 chainHg19,85 chainMm9,85 chainMonDom5,85 chainNetAilMel1,90 chainNetCanFam2,88 chainNetHg19,88 chainNetMm9,88 chainNetMonDom5,88 netAilMel1,87 netCanFam2,85 netHg19,85 netMm9,85 netMonDom5,85 after chainAilMel1,905 chainCanFam2,902 chainHg19,902 chainMm9,902 chainMonDom5,902 chainNetAilMel1,908 chainNetCanFam2,905 chainNetHg19,905 chainNetMm9,905 chainNetMonDom5,905 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netAilMel1,905 netCanFam2,902 netHg19,902 netMm9,902 netMonDom5,902 ag intronEst,89 against est,649 intronEst,35 intronEst,730 mrna,341 mrna,389 refGene,254 xenoRefGene,220 agp ctgPos2,22 ctgPos2,42 gap,164 gap,171 gold,163 agp.gz ctgPos2,25 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 ailmel1 chainAilMel1,8 chainAilMel1,71 chainAilMel1,306 chainNetAilMel1,9 chainNetAilMel1,74 chainNetAilMel1,309 chainNetAilMel1Viewchain,7 chainNetAilMel1Viewnet,7 netAilMel1,8 netAilMel1,71 netAilMel1,306 al cons6way,1791 cons6way,2141 cons6way,2235 cons6way,2366 cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 nscanGene,178 nscanGene,197 refGene,373 xenoRefGene,338 algorithm augustusGene,130 cons6way,1345 cons6way,1576 tRNAs,40 align chainAilMel1,196 chainCanFam2,194 chainHg19,194 chainMm9,194 chainMonDom5,194 chainNetAilMel1,199 chainNetCanFam2,197 chainNetHg19,197 chainNetMm9,197 chainNetMonDom5,197 est,679 intronEst,760 multiz6way,2 netAilMel1,196 netCanFam2,194 netHg19,194 netMm9,194 netMonDom5,194 alignable chainAilMel1,23 chainAilMel1,39 chainCanFam2,22 chainCanFam2,38 chainHg19,22 chainHg19,38 chainMm9,22 chainMm9,38 chainMonDom5,22 chainMonDom5,38 chainNetAilMel1,26 chainNetAilMel1,42 chainNetCanFam2,25 chainNetCanFam2,41 chainNetHg19,25 chainNetHg19,41 chainNetMm9,25 chainNetMm9,41 chainNetMonDom5,25 chainNetMonDom5,41 netAilMel1,23 netAilMel1,39 netCanFam2,22 netCanFam2,38 netHg19,22 netHg19,38 netMm9,22 netMm9,38 netMonDom5,22 netMonDom5,38 aligned blastHg18KG,47 blastHg18KG,71 chainAilMel1,587 chainCanFam2,584 chainHg19,584 chainMm9,584 chainMonDom5,584 chainNetAilMel1,590 chainNetCanFam2,587 chainNetHg19,587 chainNetMm9,587 chainNetMonDom5,587 cons6way,427 cons6way,783 cons6way,793 cons6way,805 cons6way,841 cons6way,893 cons6way,934 cons6way,957 cons6way,1001 cons6way,1187 cons6way,1246 cons6way,1433 est,648 est,684 intronEst,34 intronEst,152 intronEst,729 intronEst,765 mrna,388 mrna,400 netAilMel1,587 netCanFam2,584 netHg19,584 netMm9,584 netMonDom5,584 nscanGene,90 refGene,253 refGene,274 xenoRefGene,219 xenoRefGene,240 aligner cons6way,2375 aligning chainAilMel1,135 chainAilMel1,332 chainAilMel1,362 chainCanFam2,133 chainCanFam2,329 chainCanFam2,359 chainHg19,133 chainHg19,329 chainHg19,359 chainMm9,133 chainMm9,329 chainMm9,359 chainMonDom5,133 chainMonDom5,329 chainMonDom5,359 chainNetAilMel1,138 chainNetAilMel1,335 chainNetAilMel1,365 chainNetCanFam2,136 chainNetCanFam2,332 chainNetCanFam2,362 chainNetHg19,136 chainNetHg19,332 chainNetHg19,362 chainNetMm9,136 chainNetMm9,332 chainNetMm9,362 chainNetMonDom5,136 chainNetMonDom5,332 chainNetMonDom5,362 cons6way,809 cons6way,813 cons6way,849 cons6way,878 cons6way,897 cons6way,2367 est,397 intronEst,478 netAilMel1,135 netAilMel1,332 netAilMel1,362 netCanFam2,133 netCanFam2,329 netCanFam2,359 netHg19,133 netHg19,329 netHg19,359 netMm9,133 netMm9,329 netMm9,359 netMonDom5,133 netMonDom5,329 netMonDom5,359 alignment blastHg18KG,165 chainAilMel1,259 chainAilMel1,1015 chainCanFam2,257 chainCanFam2,1012 chainHg19,257 chainHg19,1012 chainMm9,257 chainMm9,1012 chainMonDom5,257 chainMonDom5,1012 chainNetAilMel1,262 chainNetAilMel1,1018 chainNetCanFam2,260 chainNetCanFam2,1015 chainNetHg19,260 chainNetHg19,1015 chainNetMm9,260 chainNetMm9,1015 chainNetMonDom5,260 chainNetMonDom5,1015 cons6way,3 cons6way,56 cons6way,100 cons6way,107 cons6way,298 cons6way,333 cons6way,404 cons6way,659 cons6way,742 cons6way,757 cons6way,972 cons6way,1023 cons6way,1043 cons6way,1192 cons6way,1368 cons6way,1400 cons6way,1456 cons6way,1480 cons6way,1488 cons6way,1515 cons6way,1590 cons6way,1692 cons6way,1875 cons6way,1912 cons6way,2027 cons6way,2412 cons6wayViewalign,4 cons6wayViewelements,4 cons6wayViewphastcons,5 cons6wayViewphyloP,5 est,55 est,420 est,426 est,438 est,689 est,802 intronEst,76 intronEst,139 intronEst,501 intronEst,507 intronEst,519 intronEst,770 intronEst,886 mrna,36 mrna,359 mrna,365 mrna,377 mrna,405 mrna,519 netAilMel1,9 netAilMel1,259 netAilMel1,1015 netCanFam2,8 netCanFam2,257 netCanFam2,1012 netHg19,8 netHg19,257 netHg19,1012 netMm9,8 netMm9,257 netMm9,1012 netMonDom5,8 netMonDom5,257 netMonDom5,1012 nscanGene,52 nscanGene,206 refGene,263 refGene,279 refGene,339 xenoRefGene,229 xenoRefGene,245 xenoRefGene,304 alignments augustusGene,300 blastHg18KG,18 chainAilMel1,10 chainAilMel1,64 chainAilMel1,447 chainAilMel1,599 chainAilMel1,611 chainAilMel1,619 chainAilMel1,645 chainAilMel1,763 chainAilMel1,1035 chainAilMel1,1100 chainCanFam2,9 chainCanFam2,63 chainCanFam2,444 chainCanFam2,596 chainCanFam2,608 chainCanFam2,616 chainCanFam2,642 chainCanFam2,760 chainCanFam2,1032 chainCanFam2,1097 chainHg19,9 chainHg19,63 chainHg19,444 chainHg19,596 chainHg19,608 chainHg19,616 chainHg19,642 chainHg19,760 chainHg19,1032 chainHg19,1097 chainMm9,9 chainMm9,63 chainMm9,444 chainMm9,596 chainMm9,608 chainMm9,616 chainMm9,642 chainMm9,760 chainMm9,1032 chainMm9,1097 chainMonDom5,9 chainMonDom5,63 chainMonDom5,444 chainMonDom5,596 chainMonDom5,608 chainMonDom5,616 chainMonDom5,642 chainMonDom5,760 chainMonDom5,1032 chainMonDom5,1097 chainNetAilMel1,13 chainNetAilMel1,67 chainNetAilMel1,450 chainNetAilMel1,602 chainNetAilMel1,614 chainNetAilMel1,622 chainNetAilMel1,648 chainNetAilMel1,766 chainNetAilMel1,1038 chainNetAilMel1,1103 chainNetAilMel1Viewchain,11 chainNetAilMel1Viewnet,11 chainNetCanFam2,12 chainNetCanFam2,66 chainNetCanFam2,447 chainNetCanFam2,599 chainNetCanFam2,611 chainNetCanFam2,619 chainNetCanFam2,645 chainNetCanFam2,763 chainNetCanFam2,1035 chainNetCanFam2,1100 chainNetCanFam2Viewchain,10 chainNetCanFam2Viewnet,10 chainNetHg19,12 chainNetHg19,66 chainNetHg19,447 chainNetHg19,599 chainNetHg19,611 chainNetHg19,619 chainNetHg19,645 chainNetHg19,763 chainNetHg19,1035 chainNetHg19,1100 chainNetHg19Viewchain,10 chainNetHg19Viewnet,10 chainNetMm9,12 chainNetMm9,66 chainNetMm9,447 chainNetMm9,599 chainNetMm9,611 chainNetMm9,619 chainNetMm9,645 chainNetMm9,763 chainNetMm9,1035 chainNetMm9,1100 chainNetMm9Viewchain,10 chainNetMm9Viewnet,10 chainNetMonDom5,12 chainNetMonDom5,66 chainNetMonDom5,447 chainNetMonDom5,599 chainNetMonDom5,611 chainNetMonDom5,619 chainNetMonDom5,645 chainNetMonDom5,763 chainNetMonDom5,1035 chainNetMonDom5,1100 chainNetMonDom5Viewchain,10 chainNetMonDom5Viewnet,10 cons6way,14 cons6way,40 cons6way,388 cons6way,532 cons6way,628 cons6way,723 cons6way,749 cons6way,762 cons6way,947 cons6way,965 cons6way,1318 cons6way,1335 cons6way,1356 cons6way,1430 cons6way,1446 cons6way,1449 cons6way,1470 cons6way,1581 cons6way,2400 cons6way,2440 cons6wayViewalign,2 est,14 est,698 intronEst,16 intronEst,779 mrna,15 mrna,414 multiz6way,4 netAilMel1,64 netAilMel1,447 netAilMel1,599 netAilMel1,611 netAilMel1,619 netAilMel1,645 netAilMel1,763 netAilMel1,1035 netAilMel1,1100 netCanFam2,63 netCanFam2,444 netCanFam2,596 netCanFam2,608 netCanFam2,616 netCanFam2,642 netCanFam2,760 netCanFam2,1032 netCanFam2,1097 netHg19,63 netHg19,444 netHg19,596 netHg19,608 netHg19,616 netHg19,642 netHg19,760 netHg19,1032 netHg19,1097 netMm9,63 netMm9,444 netMm9,596 netMm9,608 netMm9,616 netMm9,642 netMm9,760 netMm9,1032 netMm9,1097 netMonDom5,63 netMonDom5,444 netMonDom5,596 netMonDom5,608 netMonDom5,616 netMonDom5,642 netMonDom5,760 netMonDom5,1032 netMonDom5,1097 nscanGene,160 refGene,288 rmsk,306 tRNAs,241 xenoRefGene,254 aligns cons6way,992 all augustusGene,207 chainAilMel1,618 chainCanFam2,615 chainHg19,615 chainMm9,615 chainMonDom5,615 chainNetAilMel1,621 chainNetCanFam2,618 chainNetHg19,618 chainNetMm9,618 chainNetMonDom5,618 cons6way,35 cons6way,334 cons6way,1185 cons6way,1844 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 est,189 est,243 est,298 est,393 est,485 intronEst,118 intronEst,270 intronEst,324 intronEst,379 intronEst,474 intronEst,566 mrna,135 mrna,189 mrna,244 nestedRepeats,138 nestedRepeats,170 netAilMel1,618 netCanFam2,615 netHg19,615 netMm9,615 netMonDom5,615 rmsk,65 tRNAs,215 allow cons6way,554 cons6way,690 nscanGene,67 allowed est,660 intronEst,741 allows augustusGene,168 chainAilMel1,82 chainCanFam2,80 chainHg19,80 chainMm9,80 chainMonDom5,80 chainNetAilMel1,85 chainNetCanFam2,83 chainNetHg19,83 chainNetMm9,83 chainNetMonDom5,83 est,388 intronEst,469 mrna,334 netAilMel1,82 netCanFam2,80 netHg19,80 netMm9,80 netMonDom5,80 refGene,181 xenoRefGene,147 alone augustusGene,33 along cons6way,1388 cons6way,1734 nscanGene,46 already chainAilMel1,808 chainCanFam2,805 chainHg19,805 chainMm9,805 chainMonDom5,805 chainNetAilMel1,811 chainNetCanFam2,808 chainNetHg19,808 chainNetMm9,808 chainNetMonDom5,808 netAilMel1,808 netCanFam2,805 netHg19,805 netMm9,805 netMonDom5,805 also blastHg18KG,135 chainAilMel1,93 chainCanFam2,91 chainHg19,91 chainMm9,91 chainMonDom5,91 chainNetAilMel1,96 chainNetCanFam2,94 chainNetHg19,94 chainNetMm9,94 chainNetMonDom5,94 cons6way,64 cons6way,110 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 ctgPos2,41 est,270 est,378 est,429 est,598 gap,170 gold,64 gold,162 intronEst,351 intronEst,459 intronEst,510 intronEst,679 mrna,216 mrna,324 mrna,368 netAilMel1,93 netCanFam2,91 netHg19,91 netMm9,91 netMonDom5,91 alter cons6way,711 est,126 intronEst,207 mrna,72 alternating gold,97 alternative augustusGene,122 cons6way,365 alternatives-from-sampling augustusGene,131 although tRNAs,133 altschul blastHg18KG,153 alus rmsk,160 always gold,128 amino blastHg18KG,62 blastHg18KG,132 among cons6way,2171 amount rmsk,215 an blastHg18KG,89 chainAilMel1,153 chainAilMel1,179 chainAilMel1,185 chainCanFam2,151 chainCanFam2,177 chainCanFam2,183 chainHg19,151 chainHg19,177 chainHg19,183 chainMm9,151 chainMm9,177 chainMm9,183 chainMonDom5,151 chainMonDom5,177 chainMonDom5,183 chainNetAilMel1,156 chainNetAilMel1,182 chainNetAilMel1,188 chainNetCanFam2,154 chainNetCanFam2,180 chainNetCanFam2,186 chainNetHg19,154 chainNetHg19,180 chainNetHg19,186 chainNetMm9,154 chainNetMm9,180 chainNetMm9,186 chainNetMonDom5,154 chainNetMonDom5,180 chainNetMonDom5,186 cons6way,621 cons6way,1399 cons6way,1479 cons6way,1484 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 est,447 est,494 est,577 gc5Base,65 intronEst,59 intronEst,528 intronEst,575 intronEst,658 nestedRepeats,196 nestedRepeats,347 netAilMel1,153 netAilMel1,179 netAilMel1,185 netCanFam2,151 netCanFam2,177 netCanFam2,183 netHg19,151 netHg19,177 netHg19,183 netMm9,151 netMm9,177 netMm9,183 netMonDom5,151 netMonDom5,177 netMonDom5,183 nscanGene,69 refGene,175 refGene,262 refGene,375 rmsk,370 tRNAs,26 tRNAs,34 tRNAs,46 xenoRefGene,141 xenoRefGene,228 xenoRefGene,340 analysis tRNAs,400 tRNAs,495 analyze microsat,122 simpleRepeat,82 and augustusGene,9 augustusGene,60 augustusGene,74 augustusGene,87 augustusGene,206 augustusGene,271 augustusGene,277 augustusGene,296 augustusGene,327 blastHg18KG,10 blastHg18KG,25 blastHg18KG,123 chainAilMel1,99 chainAilMel1,113 chainAilMel1,227 chainAilMel1,235 chainAilMel1,249 chainAilMel1,287 chainAilMel1,310 chainAilMel1,436 chainAilMel1,590 chainAilMel1,625 chainAilMel1,633 chainAilMel1,774 chainAilMel1,852 chainAilMel1,884 chainAilMel1,895 chainAilMel1,904 chainAilMel1,929 chainAilMel1,944 chainAilMel1,969 chainAilMel1,975 chainAilMel1,981 chainAilMel1,988 chainAilMel1,994 chainAilMel1,1058 chainAilMel1,1063 chainCanFam2,97 chainCanFam2,111 chainCanFam2,225 chainCanFam2,233 chainCanFam2,247 chainCanFam2,285 chainCanFam2,307 chainCanFam2,433 chainCanFam2,587 chainCanFam2,622 chainCanFam2,630 chainCanFam2,771 chainCanFam2,849 chainCanFam2,881 chainCanFam2,892 chainCanFam2,901 chainCanFam2,926 chainCanFam2,941 chainCanFam2,966 chainCanFam2,972 chainCanFam2,978 chainCanFam2,985 chainCanFam2,991 chainCanFam2,1055 chainCanFam2,1060 chainHg19,97 chainHg19,111 chainHg19,225 chainHg19,233 chainHg19,247 chainHg19,285 chainHg19,307 chainHg19,433 chainHg19,587 chainHg19,622 chainHg19,630 chainHg19,771 chainHg19,849 chainHg19,881 chainHg19,892 chainHg19,901 chainHg19,926 chainHg19,941 chainHg19,966 chainHg19,972 chainHg19,978 chainHg19,985 chainHg19,991 chainHg19,1055 chainHg19,1060 chainMm9,97 chainMm9,111 chainMm9,225 chainMm9,233 chainMm9,247 chainMm9,285 chainMm9,307 chainMm9,433 chainMm9,587 chainMm9,622 chainMm9,630 chainMm9,771 chainMm9,849 chainMm9,881 chainMm9,892 chainMm9,901 chainMm9,926 chainMm9,941 chainMm9,966 chainMm9,972 chainMm9,978 chainMm9,985 chainMm9,991 chainMm9,1055 chainMm9,1060 chainMonDom5,97 chainMonDom5,111 chainMonDom5,225 chainMonDom5,233 chainMonDom5,247 chainMonDom5,285 chainMonDom5,307 chainMonDom5,433 chainMonDom5,587 chainMonDom5,622 chainMonDom5,630 chainMonDom5,771 chainMonDom5,849 chainMonDom5,881 chainMonDom5,892 chainMonDom5,901 chainMonDom5,926 chainMonDom5,941 chainMonDom5,966 chainMonDom5,972 chainMonDom5,978 chainMonDom5,985 chainMonDom5,991 chainMonDom5,1055 chainMonDom5,1060 chainNetAilMel1,11 chainNetAilMel1,102 chainNetAilMel1,116 chainNetAilMel1,230 chainNetAilMel1,238 chainNetAilMel1,252 chainNetAilMel1,290 chainNetAilMel1,313 chainNetAilMel1,439 chainNetAilMel1,593 chainNetAilMel1,628 chainNetAilMel1,636 chainNetAilMel1,777 chainNetAilMel1,855 chainNetAilMel1,887 chainNetAilMel1,898 chainNetAilMel1,907 chainNetAilMel1,932 chainNetAilMel1,947 chainNetAilMel1,972 chainNetAilMel1,978 chainNetAilMel1,984 chainNetAilMel1,991 chainNetAilMel1,997 chainNetAilMel1,1061 chainNetAilMel1,1066 chainNetAilMel1Viewchain,9 chainNetAilMel1Viewnet,9 chainNetCanFam2,10 chainNetCanFam2,100 chainNetCanFam2,114 chainNetCanFam2,228 chainNetCanFam2,236 chainNetCanFam2,250 chainNetCanFam2,288 chainNetCanFam2,310 chainNetCanFam2,436 chainNetCanFam2,590 chainNetCanFam2,625 chainNetCanFam2,633 chainNetCanFam2,774 chainNetCanFam2,852 chainNetCanFam2,884 chainNetCanFam2,895 chainNetCanFam2,904 chainNetCanFam2,929 chainNetCanFam2,944 chainNetCanFam2,969 chainNetCanFam2,975 chainNetCanFam2,981 chainNetCanFam2,988 chainNetCanFam2,994 chainNetCanFam2,1058 chainNetCanFam2,1063 chainNetCanFam2Viewchain,8 chainNetCanFam2Viewnet,8 chainNetHg19,10 chainNetHg19,100 chainNetHg19,114 chainNetHg19,228 chainNetHg19,236 chainNetHg19,250 chainNetHg19,288 chainNetHg19,310 chainNetHg19,436 chainNetHg19,590 chainNetHg19,625 chainNetHg19,633 chainNetHg19,774 chainNetHg19,852 chainNetHg19,884 chainNetHg19,895 chainNetHg19,904 chainNetHg19,929 chainNetHg19,944 chainNetHg19,969 chainNetHg19,975 chainNetHg19,981 chainNetHg19,988 chainNetHg19,994 chainNetHg19,1058 chainNetHg19,1063 chainNetHg19Viewchain,8 chainNetHg19Viewnet,8 chainNetMm9,10 chainNetMm9,100 chainNetMm9,114 chainNetMm9,228 chainNetMm9,236 chainNetMm9,250 chainNetMm9,288 chainNetMm9,310 chainNetMm9,436 chainNetMm9,590 chainNetMm9,625 chainNetMm9,633 chainNetMm9,774 chainNetMm9,852 chainNetMm9,884 chainNetMm9,895 chainNetMm9,904 chainNetMm9,929 chainNetMm9,944 chainNetMm9,969 chainNetMm9,975 chainNetMm9,981 chainNetMm9,988 chainNetMm9,994 chainNetMm9,1058 chainNetMm9,1063 chainNetMm9Viewchain,8 chainNetMm9Viewnet,8 chainNetMonDom5,10 chainNetMonDom5,100 chainNetMonDom5,114 chainNetMonDom5,228 chainNetMonDom5,236 chainNetMonDom5,250 chainNetMonDom5,288 chainNetMonDom5,310 chainNetMonDom5,436 chainNetMonDom5,590 chainNetMonDom5,625 chainNetMonDom5,633 chainNetMonDom5,774 chainNetMonDom5,852 chainNetMonDom5,884 chainNetMonDom5,895 chainNetMonDom5,904 chainNetMonDom5,929 chainNetMonDom5,944 chainNetMonDom5,969 chainNetMonDom5,975 chainNetMonDom5,981 chainNetMonDom5,988 chainNetMonDom5,994 chainNetMonDom5,1058 chainNetMonDom5,1063 chainNetMonDom5Viewchain,8 chainNetMonDom5Viewnet,8 cons6way,19 cons6way,28 cons6way,45 cons6way,156 cons6way,166 cons6way,243 cons6way,257 cons6way,287 cons6way,291 cons6way,295 cons6way,300 cons6way,306 cons6way,321 cons6way,354 cons6way,380 cons6way,384 cons6way,393 cons6way,426 cons6way,432 cons6way,466 cons6way,535 cons6way,548 cons6way,572 cons6way,1026 cons6way,1071 cons6way,1364 cons6way,1369 cons6way,1408 cons6way,1411 cons6way,1423 cons6way,1460 cons6way,1522 cons6way,1551 cons6way,1640 cons6way,1653 cons6way,1659 cons6way,1673 cons6way,1725 cons6way,1771 cons6way,1802 cons6way,1879 cons6way,1884 cons6way,1966 cons6way,1994 cons6way,2032 cons6way,2039 cons6way,2049 cons6way,2065 cons6way,2123 cons6way,2128 cons6way,2143 cons6way,2158 cons6way,2243 cons6way,2319 cons6way,2324 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 ctgPos2,5 est,8 est,23 est,45 est,85 est,129 est,290 est,454 est,468 est,476 est,604 est,709 gap,5 gap,65 gap,87 gc5Base,9 gc5Base,22 gc5Base,74 gold,6 gold,49 gold,59 gold,99 gold,113 gold,119 intronEst,10 intronEst,25 intronEst,86 intronEst,129 intronEst,166 intronEst,210 intronEst,371 intronEst,535 intronEst,549 intronEst,557 intronEst,685 intronEst,790 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,8 mrna,21 mrna,26 mrna,75 mrna,236 mrna,355 mrna,425 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netAilMel1,99 netAilMel1,113 netAilMel1,227 netAilMel1,235 netAilMel1,249 netAilMel1,287 netAilMel1,310 netAilMel1,436 netAilMel1,590 netAilMel1,625 netAilMel1,633 netAilMel1,774 netAilMel1,852 netAilMel1,884 netAilMel1,895 netAilMel1,904 netAilMel1,929 netAilMel1,944 netAilMel1,969 netAilMel1,975 netAilMel1,981 netAilMel1,988 netAilMel1,994 netAilMel1,1058 netAilMel1,1063 netCanFam2,97 netCanFam2,111 netCanFam2,225 netCanFam2,233 netCanFam2,247 netCanFam2,285 netCanFam2,307 netCanFam2,433 netCanFam2,587 netCanFam2,622 netCanFam2,630 netCanFam2,771 netCanFam2,849 netCanFam2,881 netCanFam2,892 netCanFam2,901 netCanFam2,926 netCanFam2,941 netCanFam2,966 netCanFam2,972 netCanFam2,978 netCanFam2,985 netCanFam2,991 netCanFam2,1055 netCanFam2,1060 netHg19,97 netHg19,111 netHg19,225 netHg19,233 netHg19,247 netHg19,285 netHg19,307 netHg19,433 netHg19,587 netHg19,622 netHg19,630 netHg19,771 netHg19,849 netHg19,881 netHg19,892 netHg19,901 netHg19,926 netHg19,941 netHg19,966 netHg19,972 netHg19,978 netHg19,985 netHg19,991 netHg19,1055 netHg19,1060 netMm9,97 netMm9,111 netMm9,225 netMm9,233 netMm9,247 netMm9,285 netMm9,307 netMm9,433 netMm9,587 netMm9,622 netMm9,630 netMm9,771 netMm9,849 netMm9,881 netMm9,892 netMm9,901 netMm9,926 netMm9,941 netMm9,966 netMm9,972 netMm9,978 netMm9,985 netMm9,991 netMm9,1055 netMm9,1060 netMonDom5,97 netMonDom5,111 netMonDom5,225 netMonDom5,233 netMonDom5,247 netMonDom5,285 netMonDom5,307 netMonDom5,433 netMonDom5,587 netMonDom5,622 netMonDom5,630 netMonDom5,771 netMonDom5,849 netMonDom5,881 netMonDom5,892 netMonDom5,901 netMonDom5,926 netMonDom5,941 netMonDom5,966 netMonDom5,972 netMonDom5,978 netMonDom5,985 netMonDom5,991 netMonDom5,1055 netMonDom5,1060 nscanGene,6 nscanGene,97 nscanGene,141 nscanGene,252 refGene,6 refGene,18 refGene,44 refGene,54 refGene,77 refGene,111 refGene,161 refGene,186 refGene,219 refGene,232 refGene,299 refGene,326 refGene,412 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 simpleRepeat,9 simpleRepeat,42 tRNAs,10 tRNAs,33 tRNAs,75 tRNAs,103 tRNAs,175 tRNAs,209 tRNAs,316 tRNAs,331 xenoRefGene,7 xenoRefGene,16 xenoRefGene,43 xenoRefGene,77 xenoRefGene,127 xenoRefGene,152 xenoRefGene,185 xenoRefGene,198 xenoRefGene,265 xenoRefGene,292 xenoRefGene,377 ang00000000 gold,58 annotated cons6way,1215 cons6way,1239 cons6way,1468 rmsk,67 annotation chainAilMel1,298 chainCanFam2,296 chainHg19,296 chainMm9,296 chainMonDom5,296 chainNetAilMel1,301 chainNetCanFam2,299 chainNetHg19,299 chainNetMm9,299 chainNetMonDom5,299 cons6way,474 cons6way,744 cons6way,1114 cons6way,1148 cons6way,1250 cons6way,1260 cons6way,2088 cons6way,2127 netAilMel1,298 netCanFam2,296 netHg19,296 netMm9,296 netMonDom5,296 nscanGene,202 nscanGene,257 rmsk,38 annotations cons6way,1166 cons6way,1454 nestedRepeats,71 refGene,220 tRNAs,99 xenoRefGene,186 another cons6way,206 any est,313 est,547 intronEst,394 intronEst,628 mrna,259 anything tRNAs,118 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 appear cons6way,330 tRNAs,326 appearance cons6way,139 apply est,185 intronEst,266 mrna,131 approach cons6way,2168 appropriate cons6way,182 refGene,144 xenoRefGene,110 apr cons6way,2379 est,807 intronEst,891 mrna,524 refGene,344 tRNAs,504 xenoRefGene,309 apsects gc5Base,51 arabidopsis nscanGene,200 arbitrary nscanGene,70 archaea tRNAs,104 are augustusGene,27 chainAilMel1,22 chainAilMel1,41 chainAilMel1,54 chainAilMel1,142 chainAilMel1,210 chainAilMel1,221 chainAilMel1,321 chainAilMel1,390 chainAilMel1,411 chainAilMel1,418 chainAilMel1,501 chainAilMel1,690 chainCanFam2,21 chainCanFam2,40 chainCanFam2,53 chainCanFam2,140 chainCanFam2,208 chainCanFam2,219 chainCanFam2,318 chainCanFam2,387 chainCanFam2,408 chainCanFam2,415 chainCanFam2,498 chainCanFam2,687 chainHg19,21 chainHg19,40 chainHg19,53 chainHg19,140 chainHg19,208 chainHg19,219 chainHg19,318 chainHg19,387 chainHg19,408 chainHg19,415 chainHg19,498 chainHg19,687 chainMm9,21 chainMm9,40 chainMm9,53 chainMm9,140 chainMm9,208 chainMm9,219 chainMm9,318 chainMm9,387 chainMm9,408 chainMm9,415 chainMm9,498 chainMm9,687 chainMonDom5,21 chainMonDom5,40 chainMonDom5,53 chainMonDom5,140 chainMonDom5,208 chainMonDom5,219 chainMonDom5,318 chainMonDom5,387 chainMonDom5,408 chainMonDom5,415 chainMonDom5,498 chainMonDom5,687 chainNetAilMel1,25 chainNetAilMel1,44 chainNetAilMel1,57 chainNetAilMel1,145 chainNetAilMel1,213 chainNetAilMel1,224 chainNetAilMel1,324 chainNetAilMel1,393 chainNetAilMel1,414 chainNetAilMel1,421 chainNetAilMel1,504 chainNetAilMel1,693 chainNetCanFam2,24 chainNetCanFam2,43 chainNetCanFam2,56 chainNetCanFam2,143 chainNetCanFam2,211 chainNetCanFam2,222 chainNetCanFam2,321 chainNetCanFam2,390 chainNetCanFam2,411 chainNetCanFam2,418 chainNetCanFam2,501 chainNetCanFam2,690 chainNetHg19,24 chainNetHg19,43 chainNetHg19,56 chainNetHg19,143 chainNetHg19,211 chainNetHg19,222 chainNetHg19,321 chainNetHg19,390 chainNetHg19,411 chainNetHg19,418 chainNetHg19,501 chainNetHg19,690 chainNetMm9,24 chainNetMm9,43 chainNetMm9,56 chainNetMm9,143 chainNetMm9,211 chainNetMm9,222 chainNetMm9,321 chainNetMm9,390 chainNetMm9,411 chainNetMm9,418 chainNetMm9,501 chainNetMm9,690 chainNetMonDom5,24 chainNetMonDom5,43 chainNetMonDom5,56 chainNetMonDom5,143 chainNetMonDom5,211 chainNetMonDom5,222 chainNetMonDom5,321 chainNetMonDom5,390 chainNetMonDom5,411 chainNetMonDom5,418 chainNetMonDom5,501 chainNetMonDom5,690 cons6way,63 cons6way,239 cons6way,253 cons6way,350 cons6way,372 cons6way,529 cons6way,578 cons6way,636 cons6way,775 cons6way,899 cons6way,1088 cons6way,1154 cons6way,1181 cons6way,1238 cons6way,1254 cons6way,1474 cons6way,1524 cons6way,1908 cons6way,1914 cons6way,1970 cons6way,1988 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 ctgPos2,30 est,27 est,64 est,146 est,156 gap,53 gap,125 gap,141 gold,91 gold,108 gold,147 intronEst,39 intronEst,227 intronEst,237 intronEst,800 microsat,16 microsat,25 microsat,52 mrna,45 mrna,92 mrna,102 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netAilMel1,22 netAilMel1,41 netAilMel1,54 netAilMel1,142 netAilMel1,210 netAilMel1,221 netAilMel1,321 netAilMel1,390 netAilMel1,411 netAilMel1,418 netAilMel1,501 netAilMel1,690 netCanFam2,21 netCanFam2,40 netCanFam2,53 netCanFam2,140 netCanFam2,208 netCanFam2,219 netCanFam2,318 netCanFam2,387 netCanFam2,408 netCanFam2,415 netCanFam2,498 netCanFam2,687 netHg19,21 netHg19,40 netHg19,53 netHg19,140 netHg19,208 netHg19,219 netHg19,318 netHg19,387 netHg19,408 netHg19,415 netHg19,498 netHg19,687 netMm9,21 netMm9,40 netMm9,53 netMm9,140 netMm9,208 netMm9,219 netMm9,318 netMm9,387 netMm9,408 netMm9,415 netMm9,498 netMm9,687 netMonDom5,21 netMonDom5,40 netMonDom5,53 netMonDom5,140 netMonDom5,208 netMonDom5,219 netMonDom5,318 netMonDom5,387 netMonDom5,408 netMonDom5,415 netMonDom5,498 netMonDom5,687 refGene,35 refGene,137 refGene,235 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 tRNAs,105 tRNAs,168 tRNAs,190 tRNAs,202 tRNAs,262 tRNAs,266 tRNAs,292 tRNAs,297 tRNAs,333 xenoRefGene,38 xenoRefGene,103 xenoRefGene,201 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5Base,37 arian chainAilMel1,942 chainCanFam2,939 chainHg19,939 chainMm9,939 chainMonDom5,939 chainNetAilMel1,945 chainNetCanFam2,942 chainNetHg19,942 chainNetMm9,942 chainNetMonDom5,942 nestedRepeats,305 netAilMel1,942 netCanFam2,939 netHg19,939 netMm9,939 netMonDom5,939 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrows nestedRepeats,145 nestedRepeats,163 articles tRNAs,365 as augustusGene,77 augustusGene,79 chainAilMel1,463 chainAilMel1,503 chainAilMel1,526 chainAilMel1,541 chainAilMel1,801 chainAilMel1,856 chainAilMel1,914 chainCanFam2,460 chainCanFam2,500 chainCanFam2,523 chainCanFam2,538 chainCanFam2,798 chainCanFam2,853 chainCanFam2,911 chainHg19,460 chainHg19,500 chainHg19,523 chainHg19,538 chainHg19,798 chainHg19,853 chainHg19,911 chainMm9,460 chainMm9,500 chainMm9,523 chainMm9,538 chainMm9,798 chainMm9,853 chainMm9,911 chainMonDom5,460 chainMonDom5,500 chainMonDom5,523 chainMonDom5,538 chainMonDom5,798 chainMonDom5,853 chainMonDom5,911 chainNetAilMel1,466 chainNetAilMel1,506 chainNetAilMel1,529 chainNetAilMel1,544 chainNetAilMel1,804 chainNetAilMel1,859 chainNetAilMel1,917 chainNetCanFam2,463 chainNetCanFam2,503 chainNetCanFam2,526 chainNetCanFam2,541 chainNetCanFam2,801 chainNetCanFam2,856 chainNetCanFam2,914 chainNetHg19,463 chainNetHg19,503 chainNetHg19,526 chainNetHg19,541 chainNetHg19,801 chainNetHg19,856 chainNetHg19,914 chainNetMm9,463 chainNetMm9,503 chainNetMm9,526 chainNetMm9,541 chainNetMm9,801 chainNetMm9,856 chainNetMm9,914 chainNetMonDom5,463 chainNetMonDom5,503 chainNetMonDom5,526 chainNetMonDom5,541 chainNetMonDom5,801 chainNetMonDom5,856 chainNetMonDom5,914 cons6way,129 cons6way,222 cons6way,224 cons6way,303 cons6way,580 cons6way,642 cons6way,651 cons6way,680 cons6way,901 cons6way,1107 cons6way,1216 cons6way,1240 cons6way,1268 cons6way,2151 cons6way,2221 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 est,594 gap,55 intronEst,675 microsat,21 nestedRepeats,125 netAilMel1,463 netAilMel1,503 netAilMel1,526 netAilMel1,541 netAilMel1,801 netAilMel1,856 netAilMel1,914 netCanFam2,460 netCanFam2,500 netCanFam2,523 netCanFam2,538 netCanFam2,798 netCanFam2,853 netCanFam2,911 netHg19,460 netHg19,500 netHg19,523 netHg19,538 netHg19,798 netHg19,853 netHg19,911 netMm9,460 netMm9,500 netMm9,523 netMm9,538 netMm9,798 netMm9,853 netMm9,911 netMonDom5,460 netMonDom5,500 netMonDom5,523 netMonDom5,538 netMonDom5,798 netMonDom5,853 netMonDom5,911 nscanGene,75 nscanGene,77 nscanGene,104 rmsk,53 rmsk,55 tRNAs,42 tRNAs,288 ask refGene,57 aspects cons6way,609 assembled ctgPos2,15 assemblies augustusGene,196 augustusGene,237 chainAilMel1,320 chainAilMel1,582 chainCanFam2,317 chainCanFam2,579 chainHg19,317 chainHg19,579 chainMm9,317 chainMm9,579 chainMonDom5,317 chainMonDom5,579 chainNetAilMel1,323 chainNetAilMel1,585 chainNetCanFam2,320 chainNetCanFam2,582 chainNetHg19,320 chainNetHg19,582 chainNetMm9,320 chainNetMm9,582 chainNetMonDom5,320 chainNetMonDom5,582 cons6way,431 cons6way,452 cons6way,516 netAilMel1,320 netAilMel1,582 netCanFam2,317 netCanFam2,579 netHg19,317 netHg19,579 netMm9,317 netMm9,579 netMonDom5,317 netMonDom5,579 nscanGene,207 rmsk,107 assembly augustusGene,197 chainAilMel1,151 chainAilMel1,158 chainAilMel1,307 chainCanFam2,149 chainCanFam2,156 chainCanFam2,304 chainHg19,149 chainHg19,156 chainHg19,304 chainMm9,149 chainMm9,156 chainMm9,304 chainMonDom5,149 chainMonDom5,156 chainMonDom5,304 chainNetAilMel1,154 chainNetAilMel1,161 chainNetAilMel1,310 chainNetCanFam2,152 chainNetCanFam2,159 chainNetCanFam2,307 chainNetHg19,152 chainNetHg19,159 chainNetHg19,307 chainNetMm9,152 chainNetMm9,159 chainNetMm9,307 chainNetMonDom5,152 chainNetMonDom5,159 chainNetMonDom5,307 ctgPos2,2 gap,15 gap,101 gap,134 gap,149 gap,163 gold,1 gold,2 gold,14 gold,34 gold,56 netAilMel1,151 netAilMel1,158 netAilMel1,307 netCanFam2,149 netCanFam2,156 netCanFam2,304 netHg19,149 netHg19,156 netHg19,304 netMm9,149 netMm9,156 netMm9,304 netMonDom5,149 netMonDom5,156 netMonDom5,304 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assigned cons6way,240 cons6way,254 cons6way,1930 associated cons6way,1954 cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 est,107 gc5Base,34 intronEst,188 rmsk,224 simpleRepeat,51 astashyn refGene,360 xenoRefGene,325 at blastHg18KG,125 chainAilMel1,420 chainAilMel1,796 chainAilMel1,918 chainAilMel1,953 chainAilMel1,958 chainAilMel1,999 chainCanFam2,417 chainCanFam2,793 chainCanFam2,915 chainCanFam2,950 chainCanFam2,955 chainCanFam2,996 chainHg19,417 chainHg19,793 chainHg19,915 chainHg19,950 chainHg19,955 chainHg19,996 chainMm9,417 chainMm9,793 chainMm9,915 chainMm9,950 chainMm9,955 chainMm9,996 chainMonDom5,417 chainMonDom5,793 chainMonDom5,915 chainMonDom5,950 chainMonDom5,955 chainMonDom5,996 chainNetAilMel1,423 chainNetAilMel1,799 chainNetAilMel1,921 chainNetAilMel1,956 chainNetAilMel1,961 chainNetAilMel1,1002 chainNetCanFam2,420 chainNetCanFam2,796 chainNetCanFam2,918 chainNetCanFam2,953 chainNetCanFam2,958 chainNetCanFam2,999 chainNetHg19,420 chainNetHg19,796 chainNetHg19,918 chainNetHg19,953 chainNetHg19,958 chainNetHg19,999 chainNetMm9,420 chainNetMm9,796 chainNetMm9,918 chainNetMm9,953 chainNetMm9,958 chainNetMm9,999 chainNetMonDom5,420 chainNetMonDom5,796 chainNetMonDom5,918 chainNetMonDom5,953 chainNetMonDom5,958 chainNetMonDom5,999 cons6way,120 cons6way,147 cons6way,188 cons6way,418 cons6way,469 cons6way,724 cons6way,1041 cons6way,1130 cons6way,1500 cons6way,1542 cons6way,1634 cons6way,1682 cons6way,1741 cons6way,1838 cons6way,1873 cons6way,2056 cons6way,2073 cons6way,2081 cons6way,2085 cons6way,2131 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 est,262 est,546 est,591 est,710 est,726 intronEst,65 intronEst,80 intronEst,105 intronEst,343 intronEst,627 intronEst,672 intronEst,791 intronEst,810 microsat,28 microsat,77 mrna,208 mrna,426 mrna,443 netAilMel1,420 netAilMel1,796 netAilMel1,918 netAilMel1,953 netAilMel1,958 netAilMel1,999 netCanFam2,417 netCanFam2,793 netCanFam2,915 netCanFam2,950 netCanFam2,955 netCanFam2,996 netHg19,417 netHg19,793 netHg19,915 netHg19,950 netHg19,955 netHg19,996 netMm9,417 netMm9,793 netMm9,915 netMm9,950 netMm9,955 netMm9,996 netMonDom5,417 netMonDom5,793 netMonDom5,915 netMonDom5,950 netMonDom5,955 netMonDom5,996 nscanGene,28 nscanGene,118 nscanGene,145 refGene,125 refGene,300 refGene,316 rmsk,243 rmsk,267 tRNAs,107 tRNAs,339 xenoRefGene,91 xenoRefGene,266 xenoRefGene,282 attempt est,578 intronEst,659 atypical tRNAs,274 aug cons6way,2249 tRNAs,433 augustus augustusGene,1 augustusGene,2 augustusGene,22 augustusGene,148 augustusGene,256 austria nscanGene,152 autocorrelated cons6way,1733 automz cons6way,1436 available augustusGene,239 cons6way,351 cons6way,530 cons6way,1096 cons6way,1199 cons6way,1225 cons6way,1475 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 nestedRepeats,259 nestedRepeats,276 rmsk,73 tRNAs,106 average nestedRepeats,186 nestedRepeats,221 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainAilMel1,603 chainAilMel1,610 chainCanFam2,600 chainCanFam2,607 chainHg19,600 chainHg19,607 chainMm9,600 chainMm9,607 chainMonDom5,600 chainMonDom5,607 chainNetAilMel1,606 chainNetAilMel1,613 chainNetCanFam2,603 chainNetCanFam2,610 chainNetHg19,603 chainNetHg19,610 chainNetMm9,603 chainNetMm9,610 chainNetMonDom5,603 chainNetMonDom5,610 netAilMel1,603 netAilMel1,610 netCanFam2,600 netCanFam2,607 netHg19,600 netHg19,607 netMm9,600 netMm9,607 netMonDom5,600 netMonDom5,607 axtchain chainAilMel1,615 chainAilMel1,701 chainAilMel1,949 chainCanFam2,612 chainCanFam2,698 chainCanFam2,946 chainHg19,612 chainHg19,698 chainHg19,946 chainMm9,612 chainMm9,698 chainMm9,946 chainMonDom5,612 chainMonDom5,698 chainMonDom5,946 chainNetAilMel1,618 chainNetAilMel1,704 chainNetAilMel1,952 chainNetCanFam2,615 chainNetCanFam2,701 chainNetCanFam2,949 chainNetHg19,615 chainNetHg19,701 chainNetHg19,949 chainNetMm9,615 chainNetMm9,701 chainNetMm9,949 chainNetMonDom5,615 chainNetMonDom5,701 chainNetMonDom5,949 cons6way,2051 netAilMel1,615 netAilMel1,701 netAilMel1,949 netCanFam2,612 netCanFam2,698 netCanFam2,946 netHg19,612 netHg19,698 netHg19,946 netMm9,612 netMm9,698 netMm9,946 netMonDom5,612 netMonDom5,698 netMonDom5,946 b cons6way,1982 tRNAs,36 back chainAilMel1,595 chainCanFam2,592 chainHg19,592 chainMm9,592 chainMonDom5,592 chainNetAilMel1,598 chainNetCanFam2,595 chainNetHg19,595 chainNetMm9,595 chainNetMonDom5,595 netAilMel1,595 netCanFam2,592 netHg19,592 netMm9,592 netMonDom5,592 background cons6way,1547 bacteria tRNAs,102 baertsch augustusGene,290 chainAilMel1,987 chainAilMel1,1045 chainAilMel1,1091 chainCanFam2,984 chainCanFam2,1042 chainCanFam2,1088 chainHg19,984 chainHg19,1042 chainHg19,1088 chainMm9,984 chainMm9,1042 chainMm9,1088 chainMonDom5,984 chainMonDom5,1042 chainMonDom5,1088 chainNetAilMel1,990 chainNetAilMel1,1048 chainNetAilMel1,1094 chainNetCanFam2,987 chainNetCanFam2,1045 chainNetCanFam2,1091 chainNetHg19,987 chainNetHg19,1045 chainNetHg19,1091 chainNetMm9,987 chainNetMm9,1045 chainNetMm9,1091 chainNetMonDom5,987 chainNetMonDom5,1045 chainNetMonDom5,1091 cons6way,2306 cons6way,2357 cons6way,2431 netAilMel1,987 netAilMel1,1045 netAilMel1,1091 netCanFam2,984 netCanFam2,1042 netCanFam2,1088 netHg19,984 netHg19,1042 netHg19,1088 netMm9,984 netMm9,1042 netMm9,1088 netMonDom5,984 netMonDom5,1042 netMonDom5,1088 bar cons6way,905 cons6way,926 barber cons6way,2112 baren nscanGene,245 base cons6way,470 cons6way,1007 cons6way,1019 cons6way,1461 cons6way,1840 cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 est,383 est,417 est,693 est,701 est,713 intronEst,464 intronEst,498 intronEst,774 intronEst,782 intronEst,794 mrna,356 mrna,409 mrna,417 mrna,429 refGene,283 refGene,291 refGene,303 rmsk,217 rmsk,219 rmsk,222 xenoRefGene,249 xenoRefGene,257 xenoRefGene,269 base-level cons6way,1013 cons6way,1098 based augustusGene,28 chainAilMel1,323 chainAilMel1,349 chainCanFam2,320 chainCanFam2,346 chainHg19,320 chainHg19,346 chainMm9,320 chainMm9,346 chainMonDom5,320 chainMonDom5,346 chainNetAilMel1,326 chainNetAilMel1,352 chainNetCanFam2,323 chainNetCanFam2,349 chainNetHg19,323 chainNetHg19,349 chainNetMm9,323 chainNetMm9,349 chainNetMonDom5,323 chainNetMonDom5,349 cons6way,96 cons6way,1376 cons6way,1617 cons6way,2137 netAilMel1,323 netAilMel1,349 netCanFam2,320 netCanFam2,346 netHg19,320 netHg19,346 netMm9,320 netMm9,346 netMonDom5,320 netMonDom5,346 tRNAs,268 bases cons6way,737 cons6way,780 cons6way,820 cons6way,1153 cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 est,33 est,394 est,666 gap,152 gc5Base,25 intronEst,45 intronEst,83 intronEst,475 intronEst,747 basewise cons6wayViewphyloP,1 phyloP6way,5 basic blastHg18KG,163 basis cons6way,1270 cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 bayesian cons6way,2488 be augustusGene,99 chainAilMel1,108 chainAilMel1,430 chainCanFam2,106 chainCanFam2,427 chainHg19,106 chainHg19,427 chainMm9,106 chainMm9,427 chainMonDom5,106 chainMonDom5,427 chainNetAilMel1,111 chainNetAilMel1,433 chainNetCanFam2,109 chainNetCanFam2,430 chainNetHg19,109 chainNetHg19,430 chainNetMm9,109 chainNetMm9,430 chainNetMonDom5,109 chainNetMonDom5,430 cons6way,237 cons6way,251 cons6way,340 cons6way,599 cons6way,1732 cons6way,1739 cons6way,1786 cons6way,1996 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 est,106 est,119 est,141 est,250 est,260 est,271 est,302 est,320 est,330 est,379 est,430 est,526 est,634 gap,46 gc5Base,41 intronEst,56 intronEst,79 intronEst,187 intronEst,200 intronEst,222 intronEst,331 intronEst,341 intronEst,352 intronEst,383 intronEst,401 intronEst,411 intronEst,460 intronEst,511 intronEst,607 intronEst,715 microsat,19 microsat,39 mrna,65 mrna,87 mrna,196 mrna,206 mrna,217 mrna,248 mrna,266 mrna,276 mrna,325 mrna,369 nestedRepeats,269 nestedRepeats,291 netAilMel1,108 netAilMel1,430 netCanFam2,106 netCanFam2,427 netHg19,106 netHg19,427 netMm9,106 netMm9,427 netMonDom5,106 netMonDom5,427 refGene,120 rmsk,278 rmsk,284 rmsk,298 simpleRepeat,44 tRNAs,128 tRNAs,220 tRNAs,227 xenoRefGene,86 bears est,91 intronEst,172 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 est,626 intronEst,707 been chainAilMel1,571 chainCanFam2,568 chainHg19,568 chainMm9,568 chainMonDom5,568 chainNetAilMel1,574 chainNetCanFam2,571 chainNetHg19,571 chainNetMm9,571 chainNetMonDom5,571 cons6way,72 cons6way,1918 intronEst,7 nestedRepeats,89 netAilMel1,571 netCanFam2,568 netHg19,568 netMm9,568 netMonDom5,568 rmsk,70 rmsk,109 before chainAilMel1,903 chainCanFam2,900 chainHg19,900 chainMm9,900 chainMonDom5,900 chainNetAilMel1,906 chainNetCanFam2,903 chainNetHg19,903 chainNetMm9,903 chainNetMonDom5,903 est,563 intronEst,644 netAilMel1,903 netCanFam2,900 netHg19,900 netMm9,900 netMonDom5,900 being cons6way,1241 bejerano cons6way,2216 belongs cons6way,91 below chainAilMel1,677 chainCanFam2,674 chainHg19,674 chainMm9,674 chainMonDom5,674 chainNetAilMel1,680 chainNetCanFam2,677 chainNetHg19,677 chainNetMm9,677 chainNetMonDom5,677 cons6way,475 cons6way,638 nestedRepeats,68 netAilMel1,677 netCanFam2,674 netHg19,674 netMm9,674 netMonDom5,674 rmsk,104 tRNAs,179 benson est,743 est,771 intronEst,827 intronEst,855 microsat,102 microsat,112 microsat,114 mrna,460 mrna,488 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 best blastHg18KG,100 chainAilMel1,267 chainAilMel1,513 chainCanFam2,265 chainCanFam2,510 chainHg19,265 chainHg19,510 chainMm9,265 chainMm9,510 chainMonDom5,265 chainMonDom5,510 chainNetAilMel1,270 chainNetAilMel1,516 chainNetCanFam2,268 chainNetCanFam2,513 chainNetHg19,268 chainNetHg19,513 chainNetMm9,268 chainNetMm9,513 chainNetMonDom5,268 chainNetMonDom5,513 cons6way,495 est,708 intronEst,789 mrna,424 netAilMel1,267 netAilMel1,513 netCanFam2,265 netCanFam2,510 netHg19,265 netHg19,510 netMm9,265 netMm9,510 netMonDom5,265 netMonDom5,510 refGene,298 xenoRefGene,264 best-in-genome cons6way,1428 better est,71 mrna,52 tRNAs,254 between chainAilMel1,52 chainAilMel1,620 chainAilMel1,850 chainCanFam2,51 chainCanFam2,617 chainCanFam2,847 chainHg19,51 chainHg19,617 chainHg19,847 chainMm9,51 chainMm9,617 chainMm9,847 chainMonDom5,51 chainMonDom5,617 chainMonDom5,847 chainNetAilMel1,55 chainNetAilMel1,623 chainNetAilMel1,853 chainNetCanFam2,54 chainNetCanFam2,620 chainNetCanFam2,850 chainNetHg19,54 chainNetHg19,620 chainNetHg19,850 chainNetMm9,54 chainNetMm9,620 chainNetMm9,850 chainNetMonDom5,54 chainNetMonDom5,620 chainNetMonDom5,850 cons6way,289 cons6way,748 cons6way,756 cons6way,791 cons6way,803 cons6way,831 cons6way,839 cons6way,862 cons6way,1964 est,15 est,82 gap,111 gap,116 gap,137 gold,105 gold,110 intronEst,17 intronEst,74 intronEst,163 mrna,16 netAilMel1,52 netAilMel1,620 netAilMel1,850 netCanFam2,51 netCanFam2,617 netCanFam2,847 netHg19,51 netHg19,617 netHg19,847 netMm9,51 netMm9,617 netMm9,847 netMonDom5,51 netMonDom5,617 netMonDom5,847 nscanGene,88 tRNAs,199 bgi-shenzhen chainAilMel1,6 chainAilMel1,69 chainAilMel1,304 chainNetAilMel1,7 chainNetAilMel1,72 chainNetAilMel1,307 chainNetAilMel1Viewchain,5 chainNetAilMel1Viewnet,5 netAilMel1,6 netAilMel1,69 netAilMel1,304 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 biochemical tRNAs,271 biocomput chainAilMel1,1038 chainCanFam2,1035 chainHg19,1035 chainMm9,1035 chainMonDom5,1035 chainNetAilMel1,1041 chainNetCanFam2,1038 chainNetHg19,1038 chainNetMm9,1038 chainNetMonDom5,1038 cons6way,2403 netAilMel1,1038 netCanFam2,1035 netHg19,1035 netMm9,1035 netMonDom5,1035 bioinformatics augustusGene,307 augustusGene,332 cons6way,53 cons6way,401 cons6way,2046 nscanGene,236 biol blastHg18KG,170 cons6way,2178 cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 nscanGene,167 tRNAs,431 biological-signal nscanGene,39 birds augustusGene,203 bits tRNAs,124 tRNAs,167 tRNAs,201 bj nscanGene,176 black gap,56 gap,95 blanchette cons6way,2345 blast blastHg18KG,144 blastHg18KG,151 blast-like est,801 intronEst,885 mrna,518 refGene,338 xenoRefGene,303 blastz chainAilMel1,915 chainAilMel1,1102 chainCanFam2,912 chainCanFam2,1099 chainHg19,912 chainHg19,1099 chainMm9,912 chainMm9,1099 chainMonDom5,912 chainMonDom5,1099 chainNetAilMel1,918 chainNetAilMel1,1105 chainNetCanFam2,915 chainNetCanFam2,1102 chainNetHg19,915 chainNetHg19,1102 chainNetMm9,915 chainNetMm9,1102 chainNetMonDom5,915 chainNetMonDom5,1102 cons6way,2031 cons6way,2389 cons6way,2442 netAilMel1,915 netAilMel1,1102 netCanFam2,912 netCanFam2,1099 netHg19,912 netHg19,1099 netMm9,912 netMm9,1099 netMonDom5,912 netMonDom5,1099 blat blastHg18KG,54 blastHg18KG,177 est,653 est,662 est,799 intronEst,734 intronEst,743 intronEst,883 mrna,394 mrna,516 refGene,259 refGene,336 xenoRefGene,225 blat--the xenoRefGene,302 block cons6way,1489 blocks chainAilMel1,45 chainAilMel1,642 chainAilMel1,663 chainCanFam2,44 chainCanFam2,639 chainCanFam2,660 chainHg19,44 chainHg19,639 chainHg19,660 chainMm9,44 chainMm9,639 chainMm9,660 chainMonDom5,44 chainMonDom5,639 chainMonDom5,660 chainNetAilMel1,48 chainNetAilMel1,645 chainNetAilMel1,666 chainNetCanFam2,47 chainNetCanFam2,642 chainNetCanFam2,663 chainNetHg19,47 chainNetHg19,642 chainNetHg19,663 chainNetMm9,47 chainNetMm9,642 chainNetMm9,663 chainNetMonDom5,47 chainNetMonDom5,642 chainNetMonDom5,663 cons6way,758 cons6way,794 cons6way,806 cons6way,842 gold,115 gold,142 intronEst,77 netAilMel1,45 netAilMel1,642 netAilMel1,663 netCanFam2,44 netCanFam2,639 netCanFam2,660 netHg19,44 netHg19,639 netHg19,660 netMm9,44 netMm9,639 netMm9,660 netMonDom5,44 netMonDom5,639 netMonDom5,660 blockset cons6way,2374 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 blue cons6way,246 cons6way,904 bolchi tRNAs,474 both chainAilMel1,97 chainAilMel1,117 chainAilMel1,170 chainAilMel1,893 chainCanFam2,95 chainCanFam2,115 chainCanFam2,168 chainCanFam2,890 chainHg19,95 chainHg19,115 chainHg19,168 chainHg19,890 chainMm9,95 chainMm9,115 chainMm9,168 chainMm9,890 chainMonDom5,95 chainMonDom5,115 chainMonDom5,168 chainMonDom5,890 chainNetAilMel1,100 chainNetAilMel1,120 chainNetAilMel1,173 chainNetAilMel1,896 chainNetCanFam2,98 chainNetCanFam2,118 chainNetCanFam2,171 chainNetCanFam2,893 chainNetHg19,98 chainNetHg19,118 chainNetHg19,171 chainNetHg19,893 chainNetMm9,98 chainNetMm9,118 chainNetMm9,171 chainNetMm9,893 chainNetMonDom5,98 chainNetMonDom5,118 chainNetMonDom5,171 chainNetMonDom5,893 cons6way,293 cons6way,307 cons6way,568 cons6way,844 cons6way,866 cons6way,1520 cons6way,1628 cons6way,1777 cons6way,1882 netAilMel1,97 netAilMel1,117 netAilMel1,170 netAilMel1,893 netCanFam2,95 netCanFam2,115 netCanFam2,168 netCanFam2,890 netHg19,95 netHg19,115 netHg19,168 netHg19,890 netMm9,95 netMm9,115 netMm9,168 netMm9,890 netMonDom5,95 netMonDom5,115 netMonDom5,168 netMonDom5,890 refGene,158 refGene,229 tRNAs,329 xenoRefGene,124 xenoRefGene,195 bothgap chainAilMel1,744 chainCanFam2,741 chainHg19,741 chainMm9,741 chainMonDom5,741 chainNetAilMel1,747 chainNetCanFam2,744 chainNetHg19,744 chainNetMm9,744 chainNetMonDom5,744 netAilMel1,744 netCanFam2,741 netHg19,741 netMm9,741 netMonDom5,741 boundaries blastHg18KG,59 gold,90 box chainAilMel1,373 chainAilMel1,455 chainCanFam2,370 chainCanFam2,452 chainHg19,370 chainHg19,452 chainMm9,370 chainMm9,452 chainMonDom5,370 chainMonDom5,452 chainNetAilMel1,376 chainNetAilMel1,458 chainNetCanFam2,373 chainNetCanFam2,455 chainNetHg19,373 chainNetHg19,455 chainNetMm9,373 chainNetMm9,455 chainNetMonDom5,373 chainNetMonDom5,455 est,205 est,216 est,256 gap,96 intronEst,286 intronEst,297 intronEst,337 mrna,151 mrna,162 mrna,202 netAilMel1,373 netAilMel1,455 netCanFam2,370 netCanFam2,452 netHg19,370 netHg19,452 netMm9,370 netMm9,452 netMonDom5,370 netMonDom5,452 refGene,248 tRNAs,37 xenoRefGene,214 boxes chainAilMel1,123 chainAilMel1,133 chainAilMel1,444 chainCanFam2,121 chainCanFam2,131 chainCanFam2,441 chainHg19,121 chainHg19,131 chainHg19,441 chainMm9,121 chainMm9,131 chainMm9,441 chainMonDom5,121 chainMonDom5,131 chainMonDom5,441 chainNetAilMel1,126 chainNetAilMel1,136 chainNetAilMel1,447 chainNetCanFam2,124 chainNetCanFam2,134 chainNetCanFam2,444 chainNetHg19,124 chainNetHg19,134 chainNetHg19,444 chainNetMm9,124 chainNetMm9,134 chainNetMm9,444 chainNetMonDom5,124 chainNetMonDom5,134 chainNetMonDom5,444 est,176 gap,57 intronEst,257 mrna,122 nestedRepeats,126 netAilMel1,123 netAilMel1,133 netAilMel1,444 netCanFam2,121 netCanFam2,131 netCanFam2,441 netHg19,121 netHg19,131 netHg19,441 netMm9,121 netMm9,131 netMm9,441 netMonDom5,121 netMonDom5,131 netMonDom5,441 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 brackets cons6way,944 cons6way,975 branch cons6way,1537 cons6way,1709 gap,22 gold,21 gold,72 branch-point augustusGene,55 branches cons6way,1845 breaks cons6way,881 cons6way,1459 breeds gold,48 brent nscanGene,113 nscanGene,139 nscanGene,156 nscanGene,227 nscanGene,247 brian blastHg18KG,197 cons6way,2092 cons6way,2124 bridge gold,140 bridged gap,85 brien cons6way,2461 broad chainCanFam2,6 chainCanFam2,68 chainCanFam2,302 chainMonDom5,6 chainMonDom5,68 chainMonDom5,302 chainNetCanFam2,7 chainNetCanFam2,71 chainNetCanFam2,305 chainNetCanFam2Viewchain,5 chainNetCanFam2Viewnet,5 chainNetMonDom5,7 chainNetMonDom5,71 chainNetMonDom5,305 chainNetMonDom5Viewchain,5 chainNetMonDom5Viewnet,5 netCanFam2,6 netCanFam2,68 netCanFam2,302 netMonDom5,6 netMonDom5,68 netMonDom5,302 brown gold,100 gold,114 refGene,354 xenoRefGene,319 browser chainAilMel1,973 chainCanFam2,970 chainHg19,970 chainMm9,970 chainMonDom5,970 chainNetAilMel1,976 chainNetCanFam2,973 chainNetHg19,973 chainNetMm9,973 chainNetMonDom5,973 cons6way,2005 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 est,223 est,347 est,364 intronEst,304 intronEst,428 intronEst,445 mrna,169 mrna,293 mrna,310 nestedRepeats,243 netAilMel1,973 netCanFam2,970 netHg19,970 netMm9,970 netMonDom5,970 browsers cons6way,444 bruccoleri tRNAs,353 built augustusGene,51 augustusGene,67 bulk cons6way,1477 burhans cons6way,2098 burks tRNAs,419 but blastHg18KG,94 chainAilMel1,546 chainCanFam2,543 chainHg19,543 chainMm9,543 chainMonDom5,543 chainNetAilMel1,549 chainNetCanFam2,546 chainNetHg19,546 chainNetMm9,546 chainNetMonDom5,546 cons6way,109 cons6way,343 est,483 est,540 est,593 intronEst,564 intronEst,621 intronEst,674 netAilMel1,546 netCanFam2,543 netHg19,543 netMm9,543 netMonDom5,543 rmsk,311 button chainAilMel1,344 chainCanFam2,341 chainHg19,341 chainMm9,341 chainMonDom5,341 chainNetAilMel1,347 chainNetCanFam2,344 chainNetHg19,344 chainNetMm9,344 chainNetMonDom5,344 netAilMel1,344 netCanFam2,341 netHg19,341 netMm9,341 netMonDom5,341 by augustusGene,147 augustusGene,266 augustusGene,282 blastHg18KG,6 blastHg18KG,180 blastHg18KG,193 chainAilMel1,110 chainAilMel1,126 chainAilMel1,314 chainAilMel1,377 chainAilMel1,414 chainAilMel1,432 chainAilMel1,810 chainAilMel1,922 chainAilMel1,941 chainAilMel1,961 chainAilMel1,985 chainAilMel1,1006 chainCanFam2,108 chainCanFam2,124 chainCanFam2,311 chainCanFam2,374 chainCanFam2,411 chainCanFam2,429 chainCanFam2,807 chainCanFam2,919 chainCanFam2,938 chainCanFam2,958 chainCanFam2,982 chainCanFam2,1003 chainHg19,108 chainHg19,124 chainHg19,311 chainHg19,374 chainHg19,411 chainHg19,429 chainHg19,807 chainHg19,919 chainHg19,938 chainHg19,958 chainHg19,982 chainHg19,1003 chainMm9,108 chainMm9,124 chainMm9,311 chainMm9,374 chainMm9,411 chainMm9,429 chainMm9,807 chainMm9,919 chainMm9,938 chainMm9,958 chainMm9,982 chainMm9,1003 chainMonDom5,108 chainMonDom5,124 chainMonDom5,311 chainMonDom5,374 chainMonDom5,411 chainMonDom5,429 chainMonDom5,807 chainMonDom5,919 chainMonDom5,938 chainMonDom5,958 chainMonDom5,982 chainMonDom5,1003 chainNetAilMel1,113 chainNetAilMel1,129 chainNetAilMel1,317 chainNetAilMel1,380 chainNetAilMel1,417 chainNetAilMel1,435 chainNetAilMel1,813 chainNetAilMel1,925 chainNetAilMel1,944 chainNetAilMel1,964 chainNetAilMel1,988 chainNetAilMel1,1009 chainNetCanFam2,111 chainNetCanFam2,127 chainNetCanFam2,314 chainNetCanFam2,377 chainNetCanFam2,414 chainNetCanFam2,432 chainNetCanFam2,810 chainNetCanFam2,922 chainNetCanFam2,941 chainNetCanFam2,961 chainNetCanFam2,985 chainNetCanFam2,1006 chainNetHg19,111 chainNetHg19,127 chainNetHg19,314 chainNetHg19,377 chainNetHg19,414 chainNetHg19,432 chainNetHg19,810 chainNetHg19,922 chainNetHg19,941 chainNetHg19,961 chainNetHg19,985 chainNetHg19,1006 chainNetMm9,111 chainNetMm9,127 chainNetMm9,314 chainNetMm9,377 chainNetMm9,414 chainNetMm9,432 chainNetMm9,810 chainNetMm9,922 chainNetMm9,941 chainNetMm9,961 chainNetMm9,985 chainNetMm9,1006 chainNetMonDom5,111 chainNetMonDom5,127 chainNetMonDom5,314 chainNetMonDom5,377 chainNetMonDom5,414 chainNetMonDom5,432 chainNetMonDom5,810 chainNetMonDom5,922 chainNetMonDom5,941 chainNetMonDom5,961 chainNetMonDom5,985 chainNetMonDom5,1006 cons6way,61 cons6way,114 cons6way,280 cons6way,459 cons6way,682 cons6way,1090 cons6way,1394 cons6way,1696 cons6way,1867 cons6way,1897 cons6way,1920 cons6way,2034 cons6way,2053 cons6way,2070 cons6way,2091 cons6way,2096 cons6way,2102 cons6way,2110 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 est,265 est,493 est,661 est,739 gap,78 gap,128 gap,143 gc5Base,81 gold,68 gold,93 intronEst,91 intronEst,346 intronEst,574 intronEst,742 intronEst,823 microsat,110 mrna,211 mrna,456 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netAilMel1,110 netAilMel1,126 netAilMel1,314 netAilMel1,377 netAilMel1,414 netAilMel1,432 netAilMel1,810 netAilMel1,922 netAilMel1,941 netAilMel1,961 netAilMel1,985 netAilMel1,1006 netCanFam2,108 netCanFam2,124 netCanFam2,311 netCanFam2,374 netCanFam2,411 netCanFam2,429 netCanFam2,807 netCanFam2,919 netCanFam2,938 netCanFam2,958 netCanFam2,982 netCanFam2,1003 netHg19,108 netHg19,124 netHg19,311 netHg19,374 netHg19,411 netHg19,429 netHg19,807 netHg19,919 netHg19,938 netHg19,958 netHg19,982 netHg19,1003 netMm9,108 netMm9,124 netMm9,311 netMm9,374 netMm9,411 netMm9,429 netMm9,807 netMm9,919 netMm9,938 netMm9,958 netMm9,982 netMm9,1003 netMonDom5,108 netMonDom5,124 netMonDom5,311 netMonDom5,374 netMonDom5,411 netMonDom5,429 netMonDom5,807 netMonDom5,919 netMonDom5,938 netMonDom5,958 netMonDom5,982 netMonDom5,1003 nscanGene,23 phastCons6way,5 phyloP6way,7 refGene,134 refGene,139 refGene,203 refGene,221 refGene,227 refGene,323 refGene,328 rmsk,4 rmsk,14 rmsk,50 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 tRNAs,20 tRNAs,335 tRNAs,347 tRNAs,490 xenoRefGene,100 xenoRefGene,105 xenoRefGene,169 xenoRefGene,187 xenoRefGene,193 xenoRefGene,289 xenoRefGene,294 c cons6way,2350 cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5Base,23 tRNAs,349 tRNAs,420 c-114100-125-31 chainAilMel1,672 chainCanFam2,669 chainHg19,669 chainMm9,669 chainMonDom5,669 chainNetAilMel1,675 chainNetCanFam2,672 chainNetHg19,672 chainNetMm9,672 chainNetMonDom5,672 netAilMel1,672 netCanFam2,669 netHg19,669 netMm9,669 netMonDom5,669 caenorhabditis augustusGene,212 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 california chainAilMel1,957 chainAilMel1,1003 chainCanFam2,954 chainCanFam2,1000 chainHg19,954 chainHg19,1000 chainMm9,954 chainMm9,1000 chainMonDom5,954 chainMonDom5,1000 chainNetAilMel1,960 chainNetAilMel1,1006 chainNetCanFam2,957 chainNetCanFam2,1003 chainNetHg19,957 chainNetHg19,1003 chainNetMm9,957 chainNetMm9,1003 chainNetMonDom5,957 chainNetMonDom5,1003 netAilMel1,957 netAilMel1,1003 netCanFam2,954 netCanFam2,1000 netHg19,954 netHg19,1000 netMm9,954 netMm9,1000 netMonDom5,954 netMonDom5,1000 can augustusGene,98 chainAilMel1,92 chainAilMel1,107 chainCanFam2,90 chainCanFam2,105 chainHg19,90 chainHg19,105 chainMm9,90 chainMm9,105 chainMonDom5,90 chainMonDom5,105 chainNetAilMel1,95 chainNetAilMel1,110 chainNetCanFam2,93 chainNetCanFam2,108 chainNetHg19,93 chainNetHg19,108 chainNetMm9,93 chainNetMm9,108 chainNetMonDom5,93 chainNetMonDom5,108 cons6way,212 cons6way,598 cons6way,1776 cons6way,1785 cons6way,1995 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 est,118 est,249 intronEst,199 intronEst,330 mrna,64 mrna,195 netAilMel1,92 netAilMel1,107 netCanFam2,90 netCanFam2,105 netHg19,90 netHg19,105 netMm9,90 netMm9,105 netMonDom5,90 netMonDom5,105 refGene,119 rmsk,116 simpleRepeat,35 xenoRefGene,85 candidates tRNAs,51 tRNAs,57 canfam2 chainCanFam2,7 chainCanFam2,69 chainCanFam2,303 chainNetCanFam2,8 chainNetCanFam2,72 chainNetCanFam2,306 chainNetCanFam2Viewchain,6 chainNetCanFam2Viewnet,6 netCanFam2,7 netCanFam2,69 netCanFam2,303 canonical intronEst,68 cap-selected est,556 intronEst,637 cap-selection est,565 intronEst,646 carefully tRNAs,229 cases chainAilMel1,192 chainAilMel1,401 chainCanFam2,190 chainCanFam2,398 chainHg19,190 chainHg19,398 chainMm9,190 chainMm9,398 chainMonDom5,190 chainMonDom5,398 chainNetAilMel1,195 chainNetAilMel1,404 chainNetCanFam2,193 chainNetCanFam2,401 chainNetHg19,193 chainNetHg19,401 chainNetMm9,193 chainNetMm9,401 chainNetMonDom5,193 chainNetMonDom5,401 netAilMel1,192 netAilMel1,401 netCanFam2,190 netCanFam2,398 netHg19,190 netHg19,398 netMm9,190 netMm9,398 netMonDom5,190 netMonDom5,398 tRNAs,224 cat blastHg18KG,74 blastHg18KG,83 chainAilMel1,74 chainAilMel1,100 chainAilMel1,157 chainAilMel1,203 chainAilMel1,269 chainAilMel1,276 chainAilMel1,576 chainAilMel1,628 chainCanFam2,72 chainCanFam2,98 chainCanFam2,155 chainCanFam2,201 chainCanFam2,267 chainCanFam2,274 chainCanFam2,573 chainCanFam2,625 chainHg19,72 chainHg19,98 chainHg19,155 chainHg19,201 chainHg19,267 chainHg19,274 chainHg19,573 chainHg19,625 chainMm9,72 chainMm9,98 chainMm9,155 chainMm9,201 chainMm9,267 chainMm9,274 chainMm9,573 chainMm9,625 chainMonDom5,72 chainMonDom5,98 chainMonDom5,155 chainMonDom5,201 chainMonDom5,267 chainMonDom5,274 chainMonDom5,573 chainMonDom5,625 chainNetAilMel1,77 chainNetAilMel1,103 chainNetAilMel1,160 chainNetAilMel1,206 chainNetAilMel1,272 chainNetAilMel1,279 chainNetAilMel1,579 chainNetAilMel1,631 chainNetCanFam2,75 chainNetCanFam2,101 chainNetCanFam2,158 chainNetCanFam2,204 chainNetCanFam2,270 chainNetCanFam2,277 chainNetCanFam2,576 chainNetCanFam2,628 chainNetHg19,75 chainNetHg19,101 chainNetHg19,158 chainNetHg19,204 chainNetHg19,270 chainNetHg19,277 chainNetHg19,576 chainNetHg19,628 chainNetMm9,75 chainNetMm9,101 chainNetMm9,158 chainNetMm9,204 chainNetMm9,270 chainNetMm9,277 chainNetMm9,576 chainNetMm9,628 chainNetMonDom5,75 chainNetMonDom5,101 chainNetMonDom5,158 chainNetMonDom5,204 chainNetMonDom5,270 chainNetMonDom5,277 chainNetMonDom5,576 chainNetMonDom5,628 cons6way,634 cons6way,797 cons6way,989 cons6way,1039 cons6way,1321 est,1 est,3 est,16 est,643 gap,30 gold,29 gold,32 gold,52 intronEst,3 intronEst,18 intronEst,124 intronEst,724 mrna,1 mrna,3 mrna,17 mrna,385 netAilMel1,74 netAilMel1,100 netAilMel1,157 netAilMel1,203 netAilMel1,269 netAilMel1,276 netAilMel1,576 netAilMel1,628 netCanFam2,72 netCanFam2,98 netCanFam2,155 netCanFam2,201 netCanFam2,267 netCanFam2,274 netCanFam2,573 netCanFam2,625 netHg19,72 netHg19,98 netHg19,155 netHg19,201 netHg19,267 netHg19,274 netHg19,573 netHg19,625 netMm9,72 netMm9,98 netMm9,155 netMm9,201 netMm9,267 netMm9,274 netMm9,573 netMm9,625 netMonDom5,72 netMonDom5,98 netMonDom5,155 netMonDom5,201 netMonDom5,267 netMonDom5,274 netMonDom5,573 netMonDom5,625 nscanGene,99 refGene,16 refGene,256 xenoRefGene,23 xenoRefGene,222 catchrv17e ctgPos2,21 gap,16 gold,15 categorized chainAilMel1,502 chainCanFam2,499 chainHg19,499 chainMm9,499 chainMonDom5,499 chainNetAilMel1,505 chainNetCanFam2,502 chainNetHg19,502 chainNetMm9,502 chainNetMonDom5,502 netAilMel1,502 netCanFam2,499 netHg19,499 netMm9,499 netMonDom5,499 catfelis cons6way,480 catus cons6way,481 ctgPos2,20 cauldron chainAilMel1,1055 chainCanFam2,1052 chainHg19,1052 chainMm9,1052 chainMonDom5,1052 chainNetAilMel1,1058 chainNetCanFam2,1055 chainNetHg19,1055 chainNetMm9,1055 chainNetMonDom5,1055 cons6way,2316 netAilMel1,1055 netCanFam2,1052 netHg19,1052 netMm9,1052 netMonDom5,1052 cause chainAilMel1,484 chainCanFam2,481 chainHg19,481 chainMm9,481 chainMonDom5,481 chainNetAilMel1,487 chainNetCanFam2,484 chainNetHg19,484 chainNetMm9,484 chainNetMonDom5,484 netAilMel1,484 netCanFam2,481 netHg19,481 netMm9,481 netMonDom5,481 caused chainAilMel1,109 chainCanFam2,107 chainHg19,107 chainMm9,107 chainMonDom5,107 chainNetAilMel1,112 chainNetCanFam2,110 chainNetHg19,110 chainNetMm9,110 chainNetMonDom5,110 netAilMel1,109 netCanFam2,107 netHg19,107 netMm9,107 netMonDom5,107 cavanaugh est,745 intronEst,829 mrna,462 cd nscanGene,195 cdna augustusGene,299 est,458 est,461 intronEst,539 intronEst,542 cells est,453 intronEst,534 cerevisiae augustusGene,222 certain nestedRepeats,294 rmsk,301 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainAilMel1,2 chainAilMel1,28 chainAilMel1,58 chainAilMel1,61 chainAilMel1,120 chainAilMel1,270 chainAilMel1,312 chainAilMel1,407 chainAilMel1,462 chainAilMel1,566 chainAilMel1,770 chainAilMel1,813 chainAilMel1,824 chainAilMel1,832 chainAilMel1,837 chainAilMel1,860 chainAilMel1,869 chainCanFam2,2 chainCanFam2,27 chainCanFam2,57 chainCanFam2,60 chainCanFam2,118 chainCanFam2,268 chainCanFam2,309 chainCanFam2,404 chainCanFam2,459 chainCanFam2,563 chainCanFam2,767 chainCanFam2,810 chainCanFam2,821 chainCanFam2,829 chainCanFam2,834 chainCanFam2,857 chainCanFam2,866 chainHg19,2 chainHg19,27 chainHg19,57 chainHg19,60 chainHg19,118 chainHg19,268 chainHg19,309 chainHg19,404 chainHg19,459 chainHg19,563 chainHg19,767 chainHg19,810 chainHg19,821 chainHg19,829 chainHg19,834 chainHg19,857 chainHg19,866 chainMm9,2 chainMm9,27 chainMm9,57 chainMm9,60 chainMm9,118 chainMm9,268 chainMm9,309 chainMm9,404 chainMm9,459 chainMm9,563 chainMm9,767 chainMm9,810 chainMm9,821 chainMm9,829 chainMm9,834 chainMm9,857 chainMm9,866 chainMonDom5,2 chainMonDom5,27 chainMonDom5,57 chainMonDom5,60 chainMonDom5,118 chainMonDom5,268 chainMonDom5,309 chainMonDom5,404 chainMonDom5,459 chainMonDom5,563 chainMonDom5,767 chainMonDom5,810 chainMonDom5,821 chainMonDom5,829 chainMonDom5,834 chainMonDom5,857 chainMonDom5,866 chainNetAilMel1,2 chainNetAilMel1,10 chainNetAilMel1,31 chainNetAilMel1,61 chainNetAilMel1,64 chainNetAilMel1,123 chainNetAilMel1,273 chainNetAilMel1,315 chainNetAilMel1,410 chainNetAilMel1,465 chainNetAilMel1,569 chainNetAilMel1,773 chainNetAilMel1,816 chainNetAilMel1,827 chainNetAilMel1,835 chainNetAilMel1,840 chainNetAilMel1,863 chainNetAilMel1,872 chainNetAilMel1Viewchain,1 chainNetAilMel1Viewchain,8 chainNetAilMel1Viewnet,8 chainNetCanFam2,2 chainNetCanFam2,9 chainNetCanFam2,30 chainNetCanFam2,60 chainNetCanFam2,63 chainNetCanFam2,121 chainNetCanFam2,271 chainNetCanFam2,312 chainNetCanFam2,407 chainNetCanFam2,462 chainNetCanFam2,566 chainNetCanFam2,770 chainNetCanFam2,813 chainNetCanFam2,824 chainNetCanFam2,832 chainNetCanFam2,837 chainNetCanFam2,860 chainNetCanFam2,869 chainNetCanFam2Viewchain,1 chainNetCanFam2Viewchain,7 chainNetCanFam2Viewnet,7 chainNetHg19,2 chainNetHg19,9 chainNetHg19,30 chainNetHg19,60 chainNetHg19,63 chainNetHg19,121 chainNetHg19,271 chainNetHg19,312 chainNetHg19,407 chainNetHg19,462 chainNetHg19,566 chainNetHg19,770 chainNetHg19,813 chainNetHg19,824 chainNetHg19,832 chainNetHg19,837 chainNetHg19,860 chainNetHg19,869 chainNetHg19Viewchain,1 chainNetHg19Viewchain,7 chainNetHg19Viewnet,7 chainNetMm9,2 chainNetMm9,9 chainNetMm9,30 chainNetMm9,60 chainNetMm9,63 chainNetMm9,121 chainNetMm9,271 chainNetMm9,312 chainNetMm9,407 chainNetMm9,462 chainNetMm9,566 chainNetMm9,770 chainNetMm9,813 chainNetMm9,824 chainNetMm9,832 chainNetMm9,837 chainNetMm9,860 chainNetMm9,869 chainNetMm9Viewchain,1 chainNetMm9Viewchain,7 chainNetMm9Viewnet,7 chainNetMonDom5,2 chainNetMonDom5,9 chainNetMonDom5,30 chainNetMonDom5,60 chainNetMonDom5,63 chainNetMonDom5,121 chainNetMonDom5,271 chainNetMonDom5,312 chainNetMonDom5,407 chainNetMonDom5,462 chainNetMonDom5,566 chainNetMonDom5,770 chainNetMonDom5,813 chainNetMonDom5,824 chainNetMonDom5,832 chainNetMonDom5,837 chainNetMonDom5,860 chainNetMonDom5,869 chainNetMonDom5Viewchain,1 chainNetMonDom5Viewchain,7 chainNetMonDom5Viewnet,7 cons6way,769 cons6way,963 cons6way,1422 cons6way,2302 netAilMel1,28 netAilMel1,58 netAilMel1,61 netAilMel1,120 netAilMel1,270 netAilMel1,312 netAilMel1,407 netAilMel1,462 netAilMel1,566 netAilMel1,770 netAilMel1,813 netAilMel1,824 netAilMel1,832 netAilMel1,837 netAilMel1,860 netAilMel1,869 netCanFam2,27 netCanFam2,57 netCanFam2,60 netCanFam2,118 netCanFam2,268 netCanFam2,309 netCanFam2,404 netCanFam2,459 netCanFam2,563 netCanFam2,767 netCanFam2,810 netCanFam2,821 netCanFam2,829 netCanFam2,834 netCanFam2,857 netCanFam2,866 netHg19,27 netHg19,57 netHg19,60 netHg19,118 netHg19,268 netHg19,309 netHg19,404 netHg19,459 netHg19,563 netHg19,767 netHg19,810 netHg19,821 netHg19,829 netHg19,834 netHg19,857 netHg19,866 netMm9,27 netMm9,57 netMm9,60 netMm9,118 netMm9,268 netMm9,309 netMm9,404 netMm9,459 netMm9,563 netMm9,767 netMm9,810 netMm9,821 netMm9,829 netMm9,834 netMm9,857 netMm9,866 netMonDom5,27 netMonDom5,57 netMonDom5,60 netMonDom5,118 netMonDom5,268 netMonDom5,309 netMonDom5,404 netMonDom5,459 netMonDom5,563 netMonDom5,767 netMonDom5,810 netMonDom5,821 netMonDom5,829 netMonDom5,834 netMonDom5,857 netMonDom5,866 chained blastHg18KG,7 blastHg18KG,86 chainAilMel1,9 chainCanFam2,8 chainHg19,8 chainMm9,8 chainMonDom5,8 chaining cons6way,1370 cons6way,1407 cons6way,2048 chainnet chainAilMel1,787 chainAilMel1,992 chainCanFam2,784 chainCanFam2,989 chainHg19,784 chainHg19,989 chainMm9,784 chainMm9,989 chainMonDom5,784 chainMonDom5,989 chainNetAilMel1,790 chainNetAilMel1,995 chainNetCanFam2,787 chainNetCanFam2,992 chainNetHg19,787 chainNetHg19,992 chainNetMm9,787 chainNetMm9,992 chainNetMonDom5,787 chainNetMonDom5,992 cons6way,2052 netAilMel1,787 netAilMel1,992 netCanFam2,784 netCanFam2,989 netHg19,784 netHg19,989 netMm9,784 netMm9,989 netMonDom5,784 netMonDom5,989 chains blastHg18KG,102 blastHg18KG,115 chainAilMel1,195 chainAilMel1,206 chainAilMel1,217 chainAilMel1,317 chainAilMel1,356 chainAilMel1,389 chainAilMel1,394 chainAilMel1,416 chainAilMel1,428 chainAilMel1,435 chainAilMel1,492 chainAilMel1,660 chainAilMel1,675 chainAilMel1,689 chainAilMel1,758 chainAilMel1,779 chainAilMel1,794 chainAilMel1,854 chainAilMel1,885 chainAilMel1,980 chainCanFam2,193 chainCanFam2,204 chainCanFam2,215 chainCanFam2,314 chainCanFam2,353 chainCanFam2,386 chainCanFam2,391 chainCanFam2,413 chainCanFam2,425 chainCanFam2,432 chainCanFam2,489 chainCanFam2,657 chainCanFam2,672 chainCanFam2,686 chainCanFam2,755 chainCanFam2,776 chainCanFam2,791 chainCanFam2,851 chainCanFam2,882 chainCanFam2,977 chainHg19,193 chainHg19,204 chainHg19,215 chainHg19,314 chainHg19,353 chainHg19,386 chainHg19,391 chainHg19,413 chainHg19,425 chainHg19,432 chainHg19,489 chainHg19,657 chainHg19,672 chainHg19,686 chainHg19,755 chainHg19,776 chainHg19,791 chainHg19,851 chainHg19,882 chainHg19,977 chainMm9,193 chainMm9,204 chainMm9,215 chainMm9,314 chainMm9,353 chainMm9,386 chainMm9,391 chainMm9,413 chainMm9,425 chainMm9,432 chainMm9,489 chainMm9,657 chainMm9,672 chainMm9,686 chainMm9,755 chainMm9,776 chainMm9,791 chainMm9,851 chainMm9,882 chainMm9,977 chainMonDom5,193 chainMonDom5,204 chainMonDom5,215 chainMonDom5,314 chainMonDom5,353 chainMonDom5,386 chainMonDom5,391 chainMonDom5,413 chainMonDom5,425 chainMonDom5,432 chainMonDom5,489 chainMonDom5,657 chainMonDom5,672 chainMonDom5,686 chainMonDom5,755 chainMonDom5,776 chainMonDom5,791 chainMonDom5,851 chainMonDom5,882 chainMonDom5,977 chainNetAilMel1,198 chainNetAilMel1,209 chainNetAilMel1,220 chainNetAilMel1,320 chainNetAilMel1,359 chainNetAilMel1,392 chainNetAilMel1,397 chainNetAilMel1,419 chainNetAilMel1,431 chainNetAilMel1,438 chainNetAilMel1,495 chainNetAilMel1,663 chainNetAilMel1,678 chainNetAilMel1,692 chainNetAilMel1,761 chainNetAilMel1,782 chainNetAilMel1,797 chainNetAilMel1,857 chainNetAilMel1,888 chainNetAilMel1,983 chainNetCanFam2,196 chainNetCanFam2,207 chainNetCanFam2,218 chainNetCanFam2,317 chainNetCanFam2,356 chainNetCanFam2,389 chainNetCanFam2,394 chainNetCanFam2,416 chainNetCanFam2,428 chainNetCanFam2,435 chainNetCanFam2,492 chainNetCanFam2,660 chainNetCanFam2,675 chainNetCanFam2,689 chainNetCanFam2,758 chainNetCanFam2,779 chainNetCanFam2,794 chainNetCanFam2,854 chainNetCanFam2,885 chainNetCanFam2,980 chainNetHg19,196 chainNetHg19,207 chainNetHg19,218 chainNetHg19,317 chainNetHg19,356 chainNetHg19,389 chainNetHg19,394 chainNetHg19,416 chainNetHg19,428 chainNetHg19,435 chainNetHg19,492 chainNetHg19,660 chainNetHg19,675 chainNetHg19,689 chainNetHg19,758 chainNetHg19,779 chainNetHg19,794 chainNetHg19,854 chainNetHg19,885 chainNetHg19,980 chainNetMm9,196 chainNetMm9,207 chainNetMm9,218 chainNetMm9,317 chainNetMm9,356 chainNetMm9,389 chainNetMm9,394 chainNetMm9,416 chainNetMm9,428 chainNetMm9,435 chainNetMm9,492 chainNetMm9,660 chainNetMm9,675 chainNetMm9,689 chainNetMm9,758 chainNetMm9,779 chainNetMm9,794 chainNetMm9,854 chainNetMm9,885 chainNetMm9,980 chainNetMonDom5,196 chainNetMonDom5,207 chainNetMonDom5,218 chainNetMonDom5,317 chainNetMonDom5,356 chainNetMonDom5,389 chainNetMonDom5,394 chainNetMonDom5,416 chainNetMonDom5,428 chainNetMonDom5,435 chainNetMonDom5,492 chainNetMonDom5,660 chainNetMonDom5,675 chainNetMonDom5,689 chainNetMonDom5,758 chainNetMonDom5,779 chainNetMonDom5,794 chainNetMonDom5,854 chainNetMonDom5,885 chainNetMonDom5,980 cons6way,747 cons6way,1340 cons6way,1350 cons6way,1384 cons6way,1396 netAilMel1,195 netAilMel1,206 netAilMel1,217 netAilMel1,317 netAilMel1,356 netAilMel1,389 netAilMel1,394 netAilMel1,416 netAilMel1,428 netAilMel1,435 netAilMel1,492 netAilMel1,660 netAilMel1,675 netAilMel1,689 netAilMel1,758 netAilMel1,779 netAilMel1,794 netAilMel1,854 netAilMel1,885 netAilMel1,980 netCanFam2,193 netCanFam2,204 netCanFam2,215 netCanFam2,314 netCanFam2,353 netCanFam2,386 netCanFam2,391 netCanFam2,413 netCanFam2,425 netCanFam2,432 netCanFam2,489 netCanFam2,657 netCanFam2,672 netCanFam2,686 netCanFam2,755 netCanFam2,776 netCanFam2,791 netCanFam2,851 netCanFam2,882 netCanFam2,977 netHg19,193 netHg19,204 netHg19,215 netHg19,314 netHg19,353 netHg19,386 netHg19,391 netHg19,413 netHg19,425 netHg19,432 netHg19,489 netHg19,657 netHg19,672 netHg19,686 netHg19,755 netHg19,776 netHg19,791 netHg19,851 netHg19,882 netHg19,977 netMm9,193 netMm9,204 netMm9,215 netMm9,314 netMm9,353 netMm9,386 netMm9,391 netMm9,413 netMm9,425 netMm9,432 netMm9,489 netMm9,657 netMm9,672 netMm9,686 netMm9,755 netMm9,776 netMm9,791 netMm9,851 netMm9,882 netMm9,977 netMonDom5,193 netMonDom5,204 netMonDom5,215 netMonDom5,314 netMonDom5,353 netMonDom5,386 netMonDom5,391 netMonDom5,413 netMonDom5,425 netMonDom5,432 netMonDom5,489 netMonDom5,657 netMonDom5,672 netMonDom5,686 netMonDom5,755 netMonDom5,776 netMonDom5,791 netMonDom5,851 netMonDom5,882 netMonDom5,977 chan tRNAs,366 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 est,122 intronEst,203 mrna,68 changed rmsk,285 changes cons6way,1645 characteristic est,327 intronEst,408 mrna,273 check chainAilMel1,339 chainCanFam2,336 chainHg19,336 chainMm9,336 chainMonDom5,336 chainNetAilMel1,342 chainNetCanFam2,339 chainNetHg19,339 chainNetMm9,339 chainNetMonDom5,339 netAilMel1,339 netCanFam2,336 netHg19,336 netMm9,336 netMonDom5,336 checkboxes cons6way,684 chiaromonte chainAilMel1,1025 chainCanFam2,1022 chainHg19,1022 chainMm9,1022 chainMonDom5,1022 chainNetAilMel1,1028 chainNetCanFam2,1025 chainNetHg19,1025 chainNetMm9,1025 chainNetMonDom5,1025 cons6way,2390 netAilMel1,1025 netCanFam2,1022 netHg19,1022 netMm9,1022 netMonDom5,1022 chicken augustusGene,204 augustusGene,262 choose augustusGene,171 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 est,283 est,322 intronEst,364 intronEst,403 mrna,229 mrna,268 chosen cons6way,1277 est,345 intronEst,426 mrna,291 chr ctgPos2,24 chr4 chainAilMel1,371 chainCanFam2,368 chainHg19,368 chainMm9,368 chainMonDom5,368 chainNetAilMel1,374 chainNetCanFam2,371 chainNetHg19,371 chainNetMm9,371 chainNetMonDom5,371 netAilMel1,371 netCanFam2,368 netHg19,368 netMm9,368 netMonDom5,368 chromosome chainAilMel1,247 chainAilMel1,326 chainAilMel1,351 chainAilMel1,359 chainAilMel1,369 chainAilMel1,378 chainAilMel1,525 chainAilMel1,540 chainAilMel1,556 chainAilMel1,624 chainAilMel1,629 chainCanFam2,245 chainCanFam2,323 chainCanFam2,348 chainCanFam2,356 chainCanFam2,366 chainCanFam2,375 chainCanFam2,522 chainCanFam2,537 chainCanFam2,553 chainCanFam2,621 chainCanFam2,626 chainHg19,245 chainHg19,323 chainHg19,348 chainHg19,356 chainHg19,366 chainHg19,375 chainHg19,522 chainHg19,537 chainHg19,553 chainHg19,621 chainHg19,626 chainMm9,245 chainMm9,323 chainMm9,348 chainMm9,356 chainMm9,366 chainMm9,375 chainMm9,522 chainMm9,537 chainMm9,553 chainMm9,621 chainMm9,626 chainMonDom5,245 chainMonDom5,323 chainMonDom5,348 chainMonDom5,356 chainMonDom5,366 chainMonDom5,375 chainMonDom5,522 chainMonDom5,537 chainMonDom5,553 chainMonDom5,621 chainMonDom5,626 chainNetAilMel1,250 chainNetAilMel1,329 chainNetAilMel1,354 chainNetAilMel1,362 chainNetAilMel1,372 chainNetAilMel1,381 chainNetAilMel1,528 chainNetAilMel1,543 chainNetAilMel1,559 chainNetAilMel1,627 chainNetAilMel1,632 chainNetCanFam2,248 chainNetCanFam2,326 chainNetCanFam2,351 chainNetCanFam2,359 chainNetCanFam2,369 chainNetCanFam2,378 chainNetCanFam2,525 chainNetCanFam2,540 chainNetCanFam2,556 chainNetCanFam2,624 chainNetCanFam2,629 chainNetHg19,248 chainNetHg19,326 chainNetHg19,351 chainNetHg19,359 chainNetHg19,369 chainNetHg19,378 chainNetHg19,525 chainNetHg19,540 chainNetHg19,556 chainNetHg19,624 chainNetHg19,629 chainNetMm9,248 chainNetMm9,326 chainNetMm9,351 chainNetMm9,359 chainNetMm9,369 chainNetMm9,378 chainNetMm9,525 chainNetMm9,540 chainNetMm9,556 chainNetMm9,624 chainNetMm9,629 chainNetMonDom5,248 chainNetMonDom5,326 chainNetMonDom5,351 chainNetMonDom5,359 chainNetMonDom5,369 chainNetMonDom5,378 chainNetMonDom5,525 chainNetMonDom5,540 chainNetMonDom5,556 chainNetMonDom5,624 chainNetMonDom5,629 cons6way,887 cons6way,931 netAilMel1,247 netAilMel1,326 netAilMel1,351 netAilMel1,359 netAilMel1,369 netAilMel1,378 netAilMel1,525 netAilMel1,540 netAilMel1,556 netAilMel1,624 netAilMel1,629 netCanFam2,245 netCanFam2,323 netCanFam2,348 netCanFam2,356 netCanFam2,366 netCanFam2,375 netCanFam2,522 netCanFam2,537 netCanFam2,553 netCanFam2,621 netCanFam2,626 netHg19,245 netHg19,323 netHg19,348 netHg19,356 netHg19,366 netHg19,375 netHg19,522 netHg19,537 netHg19,553 netHg19,621 netHg19,626 netMm9,245 netMm9,323 netMm9,348 netMm9,356 netMm9,366 netMm9,375 netMm9,522 netMm9,537 netMm9,553 netMm9,621 netMm9,626 netMonDom5,245 netMonDom5,323 netMonDom5,348 netMonDom5,356 netMonDom5,366 netMonDom5,375 netMonDom5,522 netMonDom5,537 netMonDom5,553 netMonDom5,621 netMonDom5,626 chromosome-based chainAilMel1,319 chainCanFam2,316 chainHg19,316 chainMm9,316 chainMonDom5,316 chainNetAilMel1,322 chainNetCanFam2,319 chainNetHg19,319 chainNetMm9,319 chainNetMonDom5,319 netAilMel1,319 netCanFam2,316 netHg19,316 netMm9,316 netMonDom5,316 churchill cons6way,1654 cons6way,2162 cinnamon gold,55 circle rmsk,202 cite tRNAs,362 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 cj cons6way,2468 clark est,747 intronEst,831 mrna,464 class rmsk,199 rmsk,253 classes cons6way,192 rmsk,150 classification rmsk,266 rmsk,282 clawson cons6way,2120 cons6way,2226 cons6way,2361 gc5Base,83 click chainAilMel1,452 chainAilMel1,466 chainCanFam2,449 chainCanFam2,463 chainHg19,449 chainHg19,463 chainMm9,449 chainMm9,463 chainMonDom5,449 chainMonDom5,463 chainNetAilMel1,455 chainNetAilMel1,469 chainNetCanFam2,452 chainNetCanFam2,466 chainNetHg19,452 chainNetHg19,466 chainNetMm9,452 chainNetMm9,466 chainNetMonDom5,452 chainNetMonDom5,466 cons6way,614 cons6way,739 gc5Base,56 netAilMel1,452 netAilMel1,466 netCanFam2,449 netCanFam2,463 netHg19,449 netHg19,463 netMm9,449 netMm9,463 netMonDom5,449 netMonDom5,463 refGene,142 refGene,246 xenoRefGene,108 xenoRefGene,212 clipped nestedRepeats,224 clone gap,114 gap,138 cloned est,463 intronEst,544 clones gap,117 closed gap,47 closest augustusGene,241 cloverleaf tRNAs,312 cm nscanGene,191 refGene,365 xenoRefGene,330 coding cons6way,1109 cons6way,1218 cons6way,1243 cons6way,1600 refGene,244 simpleRepeat,38 xenoRefGene,210 codon cons6way,197 cons6way,1093 cons6way,1126 cons6way,1144 cons6way,1203 cons6way,1230 cons6way,1261 cons6way,1314 cons6way,2129 mrna,329 mrna,354 refGene,170 refGene,177 refGene,192 refGene,222 xenoRefGene,136 xenoRefGene,143 xenoRefGene,158 xenoRefGene,188 codons cons6way,1511 refGene,197 refGene,204 xenoRefGene,163 xenoRefGene,170 cold cons6way,419 cons6way,2074 collapsed nestedRepeats,173 collection refGene,28 xenoRefGene,31 color chainAilMel1,347 chainCanFam2,344 chainHg19,344 chainMm9,344 chainMonDom5,344 chainNetAilMel1,350 chainNetCanFam2,347 chainNetHg19,347 chainNetMm9,347 chainNetMonDom5,347 est,128 est,324 intronEst,209 intronEst,405 mrna,74 mrna,270 netAilMel1,347 netCanFam2,344 netHg19,344 netMm9,344 netMonDom5,344 refGene,90 refGene,201 rmsk,207 xenoRefGene,56 xenoRefGene,167 coloration gold,101 colored chainAilMel1,322 chainCanFam2,319 chainHg19,319 chainMm9,319 chainMonDom5,319 chainNetAilMel1,325 chainNetCanFam2,322 chainNetHg19,322 chainNetMm9,322 chainNetMonDom5,322 est,431 intronEst,512 mrna,370 netAilMel1,322 netCanFam2,319 netHg19,319 netMm9,319 netMonDom5,319 coloring chainAilMel1,338 chainCanFam2,335 chainHg19,335 chainMm9,335 chainMonDom5,335 chainNetAilMel1,341 chainNetCanFam2,338 chainNetHg19,338 chainNetMm9,338 chainNetMonDom5,338 cons6way,848 est,418 intronEst,499 mrna,330 mrna,357 netAilMel1,338 netCanFam2,335 netHg19,335 netMm9,335 netMonDom5,335 refGene,171 refGene,178 refGene,216 xenoRefGene,137 xenoRefGene,144 xenoRefGene,182 colors refGene,113 refGene,193 xenoRefGene,79 xenoRefGene,159 column cons6way,108 cons6way,1693 cons6way,1876 nestedRepeats,107 columns cons6way,113 cons6way,122 combination est,286 intronEst,367 mrna,232 combined rmsk,232 combines nscanGene,38 comes cons6way,927 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 community cons6way,2150 comparative chainAilMel1,11 chainCanFam2,10 chainHg19,10 chainMm9,10 chainMonDom5,10 chainNetAilMel1,14 chainNetAilMel1Viewchain,12 chainNetAilMel1Viewnet,12 chainNetCanFam2,13 chainNetCanFam2Viewchain,11 chainNetCanFam2Viewnet,11 chainNetHg19,13 chainNetHg19Viewchain,11 chainNetHg19Viewnet,11 chainNetMm9,13 chainNetMm9Viewchain,11 chainNetMm9Viewnet,11 chainNetMonDom5,13 chainNetMonDom5Viewchain,11 chainNetMonDom5Viewnet,11 cons6way,7 cons6way,54 cons6way,402 cons6wayViewalign,8 cons6wayViewelements,8 cons6wayViewphastcons,9 cons6wayViewphyloP,9 multiz6way,8 netAilMel1,11 netCanFam2,10 netHg19,10 netMm9,10 netMonDom5,10 phastCons6way,7 phastConsElements6way,6 phyloP6way,9 compare mrna,339 refGene,187 xenoRefGene,153 compgen.cshl.edu cons6way,1828 completely refGene,169 xenoRefGene,135 complex chainAilMel1,163 chainCanFam2,161 chainHg19,161 chainMm9,161 chainMonDom5,161 chainNetAilMel1,166 chainNetCanFam2,164 chainNetHg19,164 chainNetMm9,164 chainNetMonDom5,164 netAilMel1,163 netCanFam2,161 netHg19,161 netMm9,161 netMonDom5,161 complexity nestedRepeats,40 rmsk,30 rmsk,182 component cons6way,1465 components ctgPos2,26 gold,143 composition cons6way,1020 comput nscanGene,166 computational nscanGene,25 nscanGene,115 computed cons6way,1866 computes cons6way,1614 computing cons6way,1815 conacc cons6way,1889 concerning refGene,60 conditional augustusGene,118 configuration chainAilMel1,311 chainCanFam2,308 chainHg19,308 chainMm9,308 chainMonDom5,308 chainNetAilMel1,314 chainNetCanFam2,311 chainNetHg19,311 chainNetMm9,311 chainNetMonDom5,311 cons6way,549 cons6way,552 cons6way,617 cons6way,625 cons6way,688 cons6way,750 cons6way,1128 est,46 gc5Base,60 gc5Base,69 intronEst,130 mrna,27 nestedRepeats,114 netAilMel1,311 netCanFam2,308 netHg19,308 netMm9,308 netMonDom5,308 refGene,78 rmsk,138 xenoRefGene,44 configured cons6way,600 est,380 gc5Base,42 intronEst,461 mrna,326 refGene,121 xenoRefGene,87 cons phastCons6way,3 phyloP6way,4 consensus cons6way,2145 consequence cons6way,131 conservation cons6way,1 cons6way,4 cons6way,23 cons6way,76 cons6way,119 cons6way,225 cons6way,407 cons6way,521 cons6way,539 cons6way,543 cons6way,565 cons6way,576 cons6way,596 cons6way,640 cons6way,665 cons6way,679 cons6way,714 cons6way,1610 cons6way,1615 cons6way,1729 cons6way,1806 cons6way,1818 cons6way,1883 cons6way,2058 cons6way,2114 cons6wayViewalign,5 cons6wayViewelements,5 cons6wayViewphastcons,2 cons6wayViewphastcons,6 cons6wayViewphyloP,2 cons6wayViewphyloP,6 multiz6way,5 nscanGene,108 phastCons6way,4 phyloP6way,6 conservation-scoring cons6way,1754 conserved cons6way,58 cons6way,94 cons6way,164 cons6way,173 cons6way,238 cons6way,1671 cons6way,1698 cons6way,1774 cons6way,1890 cons6way,1893 cons6way,1922 cons6way,1941 cons6way,2237 cons6wayViewelements,1 phastConsElements6way,4 considerable est,637 intronEst,718 considered intronEst,57 considering cons6way,1843 considers cons6way,102 consisting cons6way,948 construct cons6way,442 constructed cons6way,1506 cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult est,217 intronEst,298 mrna,163 contained chainAilMel1,886 chainCanFam2,883 chainHg19,883 chainMm9,883 chainMonDom5,883 chainNetAilMel1,889 chainNetCanFam2,886 chainNetHg19,886 chainNetMm9,886 chainNetMonDom5,886 netAilMel1,886 netCanFam2,883 netHg19,883 netMm9,883 netMonDom5,883 containing cons6way,1483 cons6way,1533 contains blastHg18KG,16 cons6way,1958 est,242 gap,102 intronEst,323 mrna,188 refGene,174 xenoRefGene,140 contamination est,625 intronEst,97 intronEst,706 content augustusGene,71 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5Base,31 conterio tRNAs,472 context cons6way,886 cons6way,954 cons6way,970 context-dependent nscanGene,93 contig ctgPos2,39 gap,135 gold,89 gold,159 contigs gap,69 gap,113 gap,139 gold,81 gold,106 gold,123 continuous-time cons6way,1717 contrast cons6way,115 cons6way,281 control tRNAs,498 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 refGene,124 xenoRefGene,90 conventions chainAilMel1,309 chainCanFam2,306 chainHg19,306 chainMm9,306 chainMonDom5,306 chainNetAilMel1,312 chainNetCanFam2,309 chainNetHg19,309 chainNetMm9,309 chainNetMonDom5,309 cons6way,547 cons6way,774 est,44 est,52 intronEst,128 intronEst,136 mrna,25 mrna,33 nestedRepeats,112 netAilMel1,309 netCanFam2,306 netHg19,306 netMm9,306 netMonDom5,306 refGene,76 refGene,84 rmsk,136 xenoRefGene,42 xenoRefGene,50 converted chainAilMel1,601 chainCanFam2,598 chainHg19,598 chainMm9,598 chainMonDom5,598 chainNetAilMel1,604 chainNetCanFam2,601 chainNetHg19,601 chainNetMm9,601 chainNetMonDom5,601 netAilMel1,601 netCanFam2,598 netHg19,598 netMm9,598 netMonDom5,598 copies microsat,80 copy cons6way,996 corrections refGene,55 corresponding cons6way,1691 corresponds est,225 intronEst,306 mrna,171 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 covariance tRNAs,60 tRNAs,402 cove tRNAs,64 cove-predicted tRNAs,341 cover est,558 intronEst,639 coverage gold,44 gold,62 covered chainAilMel1,809 chainCanFam2,806 chainHg19,806 chainMm9,806 chainMonDom5,806 chainNetAilMel1,812 chainNetCanFam2,809 chainNetHg19,809 chainNetMm9,809 chainNetMonDom5,809 netAilMel1,809 netCanFam2,806 netHg19,806 netMm9,806 netMonDom5,806 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 created chainAilMel1,984 chainCanFam2,981 chainHg19,981 chainMm9,981 chainMonDom5,981 chainNetAilMel1,987 chainNetCanFam2,984 chainNetHg19,984 chainNetMm9,984 chainNetMonDom5,984 cons6way,410 cons6way,2022 microsat,89 netAilMel1,984 netCanFam2,981 netHg19,981 netMm9,981 netMonDom5,981 rmsk,13 creates chainAilMel1,634 chainCanFam2,631 chainHg19,631 chainMm9,631 chainMonDom5,631 chainNetAilMel1,637 chainNetCanFam2,634 chainNetHg19,634 chainNetMm9,634 chainNetMonDom5,634 netAilMel1,634 netCanFam2,631 netHg19,631 netMm9,631 netMonDom5,631 credits augustusGene,247 blastHg18KG,137 chainAilMel1,910 chainCanFam2,907 chainHg19,907 chainMm9,907 chainMonDom5,907 chainNetAilMel1,913 chainNetCanFam2,910 chainNetHg19,910 chainNetMm9,910 chainNetMonDom5,910 cons6way,2018 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 est,721 gc5Base,71 intronEst,805 microsat,104 mrna,437 nestedRepeats,302 netAilMel1,910 netCanFam2,907 netHg19,907 netMm9,907 netMonDom5,907 nscanGene,109 refGene,311 rmsk,325 simpleRepeat,66 tRNAs,328 xenoRefGene,277 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 est,300 est,318 est,356 est,374 intronEst,381 intronEst,399 intronEst,437 intronEst,455 mrna,246 mrna,264 mrna,302 mrna,320 cruz chainAilMel1,960 chainAilMel1,1005 chainCanFam2,957 chainCanFam2,1002 chainHg19,957 chainHg19,1002 chainMm9,957 chainMm9,1002 chainMonDom5,957 chainMonDom5,1002 chainNetAilMel1,963 chainNetAilMel1,1008 chainNetCanFam2,960 chainNetCanFam2,1005 chainNetHg19,960 chainNetHg19,1005 chainNetMm9,960 chainNetMm9,1005 chainNetMonDom5,960 chainNetMonDom5,1005 netAilMel1,960 netAilMel1,1005 netCanFam2,957 netCanFam2,1002 netHg19,957 netHg19,1002 netMm9,957 netMm9,1002 netMonDom5,957 netMonDom5,1002 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 culex augustusGene,220 curated refGene,327 refGene,405 xenoRefGene,293 xenoRefGene,370 curator rmsk,261 curr nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current est,160 intronEst,241 mrna,106 nestedRepeats,250 currently gold,86 nscanGene,144 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5Base,24 d augustusGene,293 chainAilMel1,1052 chainAilMel1,1096 chainCanFam2,1049 chainCanFam2,1093 chainHg19,1049 chainHg19,1093 chainMm9,1049 chainMm9,1093 chainMonDom5,1049 chainMonDom5,1093 chainNetAilMel1,1055 chainNetAilMel1,1099 chainNetCanFam2,1052 chainNetCanFam2,1096 chainNetHg19,1052 chainNetHg19,1096 chainNetMm9,1052 chainNetMm9,1096 chainNetMonDom5,1052 chainNetMonDom5,1096 cons6way,2260 cons6way,2313 cons6way,2436 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 netAilMel1,1052 netAilMel1,1096 netCanFam2,1049 netCanFam2,1093 netHg19,1049 netHg19,1093 netMm9,1049 netMm9,1093 netMonDom5,1049 netMonDom5,1093 nscanGene,226 d23-6 est,792 intronEst,876 mrna,509 d36-42 est,766 intronEst,850 mrna,483 d501-4 refGene,423 xenoRefGene,388 d756-63 refGene,389 xenoRefGene,354 d93-7 tRNAs,389 da est,744 est,772 intronEst,828 intronEst,856 mrna,461 mrna,489 dark refGene,107 xenoRefGene,73 darker cons6way,671 intronEst,145 darkly est,66 mrna,47 data cons6way,305 cons6way,525 cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 est,731 gap,81 gc5Base,73 intronEst,815 microsat,47 mrna,448 nestedRepeats,263 nestedRepeats,280 nscanGene,126 refGene,31 refGene,321 rmsk,126 rmsk,287 tRNAs,360 xenoRefGene,34 xenoRefGene,287 database chainAilMel1,976 chainCanFam2,973 chainHg19,973 chainMm9,973 chainMonDom5,973 chainNetAilMel1,979 chainNetCanFam2,976 chainNetHg19,976 chainNetMm9,976 chainNetMonDom5,976 est,764 est,790 intronEst,848 intronEst,874 mrna,481 mrna,507 nestedRepeats,345 netAilMel1,976 netCanFam2,973 netHg19,973 netMm9,973 netMonDom5,973 refGene,387 refGene,408 refGene,421 rmsk,125 rmsk,368 tRNAs,110 tRNAs,372 tRNAs,387 xenoRefGene,352 xenoRefGene,373 xenoRefGene,386 databases est,612 est,738 intronEst,101 intronEst,693 intronEst,822 mrna,455 tRNAs,489 dateucsc cons6way,477 david chainAilMel1,970 chainCanFam2,967 chainHg19,967 chainMm9,967 chainMonDom5,967 chainNetAilMel1,973 chainNetCanFam2,970 chainNetHg19,970 chainNetMm9,970 chainNetMonDom5,970 netAilMel1,970 netCanFam2,967 netHg19,967 netMm9,967 netMonDom5,967 db nscanGene,193 de augustusGene,303 cons6way,2475 nscanGene,55 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec chainAilMel1,4 chainAilMel1,67 chainAilMel1,302 chainNetAilMel1,5 chainNetAilMel1,70 chainNetAilMel1,305 chainNetAilMel1Viewchain,3 chainNetAilMel1Viewnet,3 cons6way,482 cons6way,493 cons6way,2492 gap,17 gold,16 nestedRepeats,389 nestedRepeats,411 netAilMel1,4 netAilMel1,67 netAilMel1,302 rmsk,412 rmsk,434 default chainAilMel1,315 chainCanFam2,312 chainHg19,312 chainMm9,312 chainMonDom5,312 chainNetAilMel1,318 chainNetCanFam2,315 chainNetHg19,315 chainNetMm9,315 chainNetMonDom5,315 cons6way,1159 cons6way,1173 cons6way,1228 cons6way,1258 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netAilMel1,315 netCanFam2,312 netHg19,312 netMm9,312 netMonDom5,312 refGene,135 refGene,228 xenoRefGene,101 xenoRefGene,194 definition gap,166 degenerate cons6way,1584 degraded est,527 intronEst,608 degree est,622 intronEst,703 delcher nscanGene,177 deletion chainAilMel1,147 chainAilMel1,1057 chainCanFam2,145 chainCanFam2,1054 chainHg19,145 chainHg19,1054 chainMm9,145 chainMm9,1054 chainMonDom5,145 chainMonDom5,1054 chainNetAilMel1,150 chainNetAilMel1,1060 chainNetCanFam2,148 chainNetCanFam2,1057 chainNetHg19,148 chainNetHg19,1057 chainNetMm9,148 chainNetMm9,1057 chainNetMonDom5,148 chainNetMonDom5,1057 cons6way,802 cons6way,2318 est,440 intronEst,521 mrna,379 netAilMel1,147 netAilMel1,1057 netCanFam2,145 netCanFam2,1054 netHg19,145 netHg19,1054 netMm9,145 netMm9,1054 netMonDom5,145 netMonDom5,1054 rmsk,220 deletions chainAilMel1,115 chainAilMel1,178 chainCanFam2,113 chainCanFam2,176 chainHg19,113 chainHg19,176 chainMm9,113 chainMm9,176 chainMonDom5,113 chainMonDom5,176 chainNetAilMel1,118 chainNetAilMel1,181 chainNetCanFam2,116 chainNetCanFam2,179 chainNetHg19,116 chainNetHg19,179 chainNetMm9,116 chainNetMm9,179 chainNetMonDom5,116 chainNetMonDom5,179 netAilMel1,115 netAilMel1,178 netCanFam2,113 netCanFam2,176 netHg19,113 netHg19,176 netMm9,113 netMm9,176 netMonDom5,113 netMonDom5,176 nscanGene,98 dense cons6way,662 est,58 gold,75 intronEst,142 mrna,39 nestedRepeats,157 nestedRepeats,168 density cons6way,645 depending cons6way,1273 depicts gap,10 gold,79 deposited est,599 intronEst,680 derived chainAilMel1,760 chainCanFam2,757 chainHg19,757 chainMm9,757 chainMonDom5,757 chainNetAilMel1,763 chainNetCanFam2,760 chainNetHg19,760 chainNetMm9,760 chainNetMonDom5,760 cons6way,1596 netAilMel1,760 netCanFam2,757 netHg19,757 netMm9,757 netMonDom5,757 tRNAs,129 described chainAilMel1,767 chainCanFam2,764 chainHg19,764 chainMm9,764 chainMonDom5,764 chainNetAilMel1,770 chainNetCanFam2,767 chainNetHg19,767 chainNetMm9,767 chainNetMonDom5,767 nestedRepeats,60 nestedRepeats,338 netAilMel1,767 netCanFam2,764 netHg19,764 netMm9,764 netMonDom5,764 rmsk,96 rmsk,361 describes augustusGene,226 cons6way,1627 description augustusGene,12 blastHg18KG,13 chainAilMel1,13 chainAilMel1,772 chainCanFam2,12 chainCanFam2,769 chainHg19,12 chainHg19,769 chainMm9,12 chainMm9,769 chainMonDom5,12 chainMonDom5,769 chainNetAilMel1,16 chainNetAilMel1,775 chainNetCanFam2,15 chainNetCanFam2,772 chainNetHg19,15 chainNetHg19,772 chainNetMm9,15 chainNetMm9,772 chainNetMonDom5,15 chainNetMonDom5,772 cons6way,9 cons6way,1418 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 ctgPos2,7 est,10 est,109 gap,7 gc5Base,11 gold,8 gold,73 intronEst,12 intronEst,190 microsat,10 mrna,10 mrna,55 nestedRepeats,14 netAilMel1,13 netAilMel1,772 netCanFam2,12 netCanFam2,769 netHg19,12 netHg19,769 netMm9,12 netMm9,769 netMonDom5,12 netMonDom5,769 nscanGene,9 refGene,9 refGene,131 rmsk,9 simpleRepeat,11 tRNAs,13 xenoRefGene,10 xenoRefGene,97 descriptions augustusGene,91 desired est,285 intronEst,366 mrna,231 detailed augustusGene,90 chainAilMel1,458 chainAilMel1,477 chainCanFam2,455 chainCanFam2,474 chainHg19,455 chainHg19,474 chainMm9,455 chainMm9,474 chainMonDom5,455 chainMonDom5,474 chainNetAilMel1,461 chainNetAilMel1,480 chainNetCanFam2,458 chainNetCanFam2,477 chainNetHg19,458 chainNetHg19,477 chainNetMm9,458 chainNetMm9,477 chainNetMonDom5,458 chainNetMonDom5,477 cons6way,719 nestedRepeats,70 netAilMel1,458 netAilMel1,477 netCanFam2,455 netCanFam2,474 netHg19,455 netHg19,474 netMm9,455 netMm9,474 netMonDom5,455 netMonDom5,474 rmsk,37 tRNAs,97 details cons6way,2000 rmsk,119 detected tRNAs,377 detection cons6way,2195 tRNAs,39 tRNAs,449 determining chainAilMel1,482 chainCanFam2,479 chainHg19,479 chainMm9,479 chainMonDom5,479 chainNetAilMel1,485 chainNetCanFam2,482 chainNetHg19,482 chainNetMm9,482 chainNetMonDom5,482 netAilMel1,482 netCanFam2,479 netHg19,479 netMm9,479 netMonDom5,479 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed chainAilMel1,917 chainAilMel1,952 chainAilMel1,998 chainCanFam2,914 chainCanFam2,949 chainCanFam2,995 chainHg19,914 chainHg19,949 chainHg19,995 chainMm9,914 chainMm9,949 chainMm9,995 chainMonDom5,914 chainMonDom5,949 chainMonDom5,995 chainNetAilMel1,920 chainNetAilMel1,955 chainNetAilMel1,1001 chainNetCanFam2,917 chainNetCanFam2,952 chainNetCanFam2,998 chainNetHg19,917 chainNetHg19,952 chainNetHg19,998 chainNetMm9,917 chainNetMm9,952 chainNetMm9,998 chainNetMonDom5,917 chainNetMonDom5,952 chainNetMonDom5,998 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 netAilMel1,917 netAilMel1,952 netAilMel1,998 netCanFam2,914 netCanFam2,949 netCanFam2,995 netHg19,914 netHg19,949 netHg19,995 netMm9,914 netMm9,949 netMm9,995 netMonDom5,914 netMonDom5,949 netMonDom5,995 development cons6way,2079 dfam rmsk,112 di-nucleotide microsat,3 microsat,32 diagrammed cons6way,1441 dieci tRNAs,476 diekhans augustusGene,288 cons6way,2104 differ cons6way,359 est,403 intronEst,484 difference cons6way,208 different augustusGene,39 augustusGene,85 augustusGene,96 augustusGene,144 augustusGene,155 augustusGene,179 augustusGene,193 chainAilMel1,557 chainCanFam2,554 chainHg19,554 chainMm9,554 chainMonDom5,554 chainNetAilMel1,560 chainNetCanFam2,557 chainNetHg19,557 chainNetMm9,557 chainNetMonDom5,557 cons6way,154 cons6way,374 cons6way,608 cons6way,930 cons6way,968 cons6way,1812 gc5Base,50 netAilMel1,557 netCanFam2,554 netHg19,554 netMm9,554 netMonDom5,554 refGene,68 rmsk,149 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 direction est,78 est,96 intronEst,159 intronEst,177 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 directory rmsk,134 discarded chainAilMel1,686 chainCanFam2,683 chainHg19,683 chainMm9,683 chainMonDom5,683 chainNetAilMel1,689 chainNetCanFam2,686 chainNetHg19,686 chainNetMm9,686 chainNetMonDom5,686 netAilMel1,686 netCanFam2,683 netHg19,683 netMm9,683 netMonDom5,683 refGene,269 xenoRefGene,235 discontinuities cons6way,882 discontinuity cons6way,908 discover blastHg18KG,57 discussion nestedRepeats,364 rmsk,387 diseases simpleRepeat,54 display chainAilMel1,239 chainAilMel1,308 chainAilMel1,353 chainAilMel1,383 chainAilMel1,442 chainAilMel1,471 chainAilMel1,500 chainAilMel1,974 chainCanFam2,237 chainCanFam2,305 chainCanFam2,350 chainCanFam2,380 chainCanFam2,439 chainCanFam2,468 chainCanFam2,497 chainCanFam2,971 chainHg19,237 chainHg19,305 chainHg19,350 chainHg19,380 chainHg19,439 chainHg19,468 chainHg19,497 chainHg19,971 chainMm9,237 chainMm9,305 chainMm9,350 chainMm9,380 chainMm9,439 chainMm9,468 chainMm9,497 chainMm9,971 chainMonDom5,237 chainMonDom5,305 chainMonDom5,350 chainMonDom5,380 chainMonDom5,439 chainMonDom5,468 chainMonDom5,497 chainMonDom5,971 chainNetAilMel1,242 chainNetAilMel1,311 chainNetAilMel1,356 chainNetAilMel1,386 chainNetAilMel1,445 chainNetAilMel1,474 chainNetAilMel1,503 chainNetAilMel1,977 chainNetCanFam2,240 chainNetCanFam2,308 chainNetCanFam2,353 chainNetCanFam2,383 chainNetCanFam2,442 chainNetCanFam2,471 chainNetCanFam2,500 chainNetCanFam2,974 chainNetHg19,240 chainNetHg19,308 chainNetHg19,353 chainNetHg19,383 chainNetHg19,442 chainNetHg19,471 chainNetHg19,500 chainNetHg19,974 chainNetMm9,240 chainNetMm9,308 chainNetMm9,353 chainNetMm9,383 chainNetMm9,442 chainNetMm9,471 chainNetMm9,500 chainNetMm9,974 chainNetMonDom5,240 chainNetMonDom5,308 chainNetMonDom5,353 chainNetMonDom5,383 chainNetMonDom5,442 chainNetMonDom5,471 chainNetMonDom5,500 chainNetMonDom5,974 cons6way,458 cons6way,546 cons6way,558 cons6way,574 cons6way,663 cons6way,700 cons6way,708 cons6way,716 cons6way,730 cons6way,746 cons6way,753 cons6way,771 cons6way,1014 cons6way,1058 cons6way,1099 cons6way,1112 cons6way,1498 cons6way,1516 cons6way,2010 cons6way,2116 cons6way,2122 est,43 est,51 est,59 est,124 est,151 est,181 est,326 est,350 est,366 est,382 est,392 est,441 gold,138 intronEst,116 intronEst,127 intronEst,135 intronEst,143 intronEst,205 intronEst,232 intronEst,262 intronEst,407 intronEst,431 intronEst,447 intronEst,463 intronEst,473 intronEst,522 mrna,24 mrna,32 mrna,40 mrna,70 mrna,97 mrna,127 mrna,272 mrna,296 mrna,312 mrna,328 mrna,380 nestedRepeats,111 netAilMel1,239 netAilMel1,308 netAilMel1,353 netAilMel1,383 netAilMel1,442 netAilMel1,471 netAilMel1,500 netAilMel1,974 netCanFam2,237 netCanFam2,305 netCanFam2,350 netCanFam2,380 netCanFam2,439 netCanFam2,468 netCanFam2,497 netCanFam2,971 netHg19,237 netHg19,305 netHg19,350 netHg19,380 netHg19,439 netHg19,468 netHg19,497 netHg19,971 netMm9,237 netMm9,305 netMm9,350 netMm9,380 netMm9,439 netMm9,468 netMm9,497 netMm9,971 netMonDom5,237 netMonDom5,305 netMonDom5,350 netMonDom5,380 netMonDom5,439 netMonDom5,468 netMonDom5,497 netMonDom5,971 refGene,75 refGene,83 refGene,112 refGene,148 refGene,191 rmsk,135 rmsk,141 rmsk,212 xenoRefGene,41 xenoRefGene,49 xenoRefGene,78 xenoRefGene,114 xenoRefGene,157 displayed chainAilMel1,419 chainAilMel1,516 chainAilMel1,691 chainCanFam2,416 chainCanFam2,513 chainCanFam2,688 chainHg19,416 chainHg19,513 chainHg19,688 chainMm9,416 chainMm9,513 chainMm9,688 chainMonDom5,416 chainMonDom5,513 chainMonDom5,688 chainNetAilMel1,422 chainNetAilMel1,519 chainNetAilMel1,694 chainNetCanFam2,419 chainNetCanFam2,516 chainNetCanFam2,691 chainNetHg19,419 chainNetHg19,516 chainNetHg19,691 chainNetMm9,419 chainNetMm9,516 chainNetMm9,691 chainNetMonDom5,419 chainNetMonDom5,516 chainNetMonDom5,691 cons6way,65 cons6way,468 cons6way,579 cons6way,612 cons6way,637 cons6way,1084 cons6way,1103 cons6way,1155 cons6way,1170 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 gc5Base,54 intronEst,801 nestedRepeats,124 nestedRepeats,217 netAilMel1,419 netAilMel1,516 netAilMel1,691 netCanFam2,416 netCanFam2,513 netCanFam2,688 netHg19,416 netHg19,513 netHg19,688 netMm9,416 netMm9,513 netMm9,688 netMonDom5,416 netMonDom5,513 netMonDom5,688 refGene,236 xenoRefGene,202 displays chainAilMel1,122 chainCanFam2,120 chainHg19,120 chainMm9,120 chainMonDom5,120 chainNetAilMel1,125 chainNetCanFam2,123 chainNetHg19,123 chainNetMm9,123 chainNetMonDom5,123 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 netAilMel1,122 netCanFam2,120 netHg19,120 netMm9,120 netMonDom5,120 rmsk,145 simpleRepeat,14 tRNAs,16 dissertation augustusGene,105 distance cons6way,830 cons6way,1379 cons6way,1541 distant est,582 intronEst,663 distinguish cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,92 distribution cons6way,1548 distributions augustusGene,83 diverged chainAilMel1,909 chainCanFam2,906 chainHg19,906 chainMm9,906 chainMonDom5,906 chainNetAilMel1,912 chainNetCanFam2,909 chainNetHg19,909 chainNetMm9,909 chainNetMonDom5,909 nestedRepeats,212 netAilMel1,909 netCanFam2,906 netHg19,906 netMm9,906 netMonDom5,906 dj blastHg18KG,162 est,752 est,776 intronEst,836 intronEst,860 mrna,469 mrna,493 dl est,780 intronEst,864 mrna,497 dna chainAilMel1,1018 chainCanFam2,1015 chainHg19,1015 chainMm9,1015 chainMonDom5,1015 chainNetAilMel1,1021 chainNetCanFam2,1018 chainNetHg19,1018 chainNetMm9,1018 chainNetMonDom5,1018 cons6way,864 cons6way,894 cons6way,920 cons6way,950 cons6way,1632 cons6way,2290 cons6way,2415 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 microsat,123 nestedRepeats,33 nestedRepeats,41 netAilMel1,1018 netCanFam2,1015 netHg19,1015 netMm9,1015 netMonDom5,1015 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 tRNAs,427 tRNAs,488 do cons6way,440 cons6way,1289 cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 gap,119 tRNAs,152 tRNAs,305 doc rmsk,132 does cons6way,709 cons6way,1757 tRNAs,113 tRNAs,135 dog chainCanFam2,1 chainCanFam2,3 chainCanFam2,65 chainCanFam2,96 chainCanFam2,148 chainCanFam2,266 chainCanFam2,291 chainCanFam2,572 chainCanFam2,620 chainNetCanFam2,1 chainNetCanFam2,4 chainNetCanFam2,68 chainNetCanFam2,99 chainNetCanFam2,151 chainNetCanFam2,269 chainNetCanFam2,294 chainNetCanFam2,575 chainNetCanFam2,623 chainNetCanFam2Viewchain,2 chainNetCanFam2Viewnet,2 netCanFam2,1 netCanFam2,3 netCanFam2,65 netCanFam2,96 netCanFam2,148 netCanFam2,266 netCanFam2,291 netCanFam2,572 netCanFam2,620 dogcanis cons6way,485 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 domestica cons6way,509 done augustusGene,265 augustusGene,281 cons6way,1233 cons6way,2080 douady cons6way,2467 double chainAilMel1,130 chainAilMel1,159 chainCanFam2,128 chainCanFam2,157 chainHg19,128 chainHg19,157 chainMm9,128 chainMm9,157 chainMonDom5,128 chainMonDom5,157 chainNetAilMel1,133 chainNetAilMel1,162 chainNetCanFam2,131 chainNetCanFam2,160 chainNetHg19,131 chainNetHg19,160 chainNetMm9,131 chainNetMm9,160 chainNetMonDom5,131 chainNetMonDom5,160 cons6way,811 netAilMel1,130 netAilMel1,159 netCanFam2,128 netCanFam2,157 netHg19,128 netHg19,157 netMm9,128 netMm9,157 netMonDom5,128 netMonDom5,157 double-lined chainAilMel1,219 chainCanFam2,217 chainHg19,217 chainMm9,217 chainMonDom5,217 chainNetAilMel1,222 chainNetCanFam2,220 chainNetHg19,220 chainNetMm9,220 chainNetMonDom5,220 netAilMel1,219 netCanFam2,217 netHg19,217 netMm9,217 netMonDom5,217 double-sided chainAilMel1,104 chainCanFam2,102 chainHg19,102 chainMm9,102 chainMonDom5,102 chainNetAilMel1,107 chainNetCanFam2,105 chainNetHg19,105 chainNetMm9,105 chainNetMonDom5,105 netAilMel1,104 netCanFam2,102 netHg19,102 netMm9,102 netMonDom5,102 download cons6way,437 cons6way,1478 downloads cons6way,523 rmsk,76 dr refGene,399 xenoRefGene,364 draft gap,14 gold,13 drastically intronEst,103 drawn gap,92 gold,134 drift cons6way,221 drosophila augustusGene,213 duan nscanGene,225 due chainAilMel1,144 chainAilMel1,212 chainAilMel1,224 chainCanFam2,142 chainCanFam2,210 chainCanFam2,222 chainHg19,142 chainHg19,210 chainHg19,222 chainMm9,142 chainMm9,210 chainMm9,222 chainMonDom5,142 chainMonDom5,210 chainMonDom5,222 chainNetAilMel1,147 chainNetAilMel1,215 chainNetAilMel1,227 chainNetCanFam2,145 chainNetCanFam2,213 chainNetCanFam2,225 chainNetHg19,145 chainNetHg19,213 chainNetHg19,225 chainNetMm9,145 chainNetMm9,213 chainNetMm9,225 chainNetMonDom5,145 chainNetMonDom5,213 chainNetMonDom5,225 cons6way,786 cons6way,826 cons6way,868 cons6way,936 netAilMel1,144 netAilMel1,212 netAilMel1,224 netCanFam2,142 netCanFam2,210 netCanFam2,222 netHg19,142 netHg19,210 netHg19,222 netMm9,142 netMm9,210 netMm9,222 netMonDom5,142 netMonDom5,210 netMonDom5,222 duplication chainAilMel1,1056 chainCanFam2,1053 chainHg19,1053 chainMm9,1053 chainMonDom5,1053 chainNetAilMel1,1059 chainNetCanFam2,1056 chainNetHg19,1056 chainNetMm9,1056 chainNetMonDom5,1056 cons6way,2317 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netAilMel1,1056 netCanFam2,1053 netHg19,1053 netMm9,1053 netMonDom5,1053 durbin tRNAs,396 during chainAilMel1,814 chainCanFam2,811 chainHg19,811 chainMm9,811 chainMonDom5,811 chainNetAilMel1,817 chainNetCanFam2,814 chainNetHg19,814 chainNetMm9,814 chainNetMonDom5,814 gap,48 netAilMel1,814 netCanFam2,811 netHg19,811 netMm9,811 netMonDom5,811 dynamic chainAilMel1,647 chainCanFam2,644 chainHg19,644 chainMm9,644 chainMonDom5,644 chainNetAilMel1,650 chainNetCanFam2,647 chainNetHg19,647 chainNetMm9,647 chainNetMonDom5,647 cons6way,1343 netAilMel1,647 netCanFam2,644 netHg19,644 netMm9,644 netMonDom5,644 e cons6way,2459 cons6way,2470 tRNAs,352 e.g chainAilMel1,370 chainCanFam2,367 chainHg19,367 chainMm9,367 chainMonDom5,367 chainNetAilMel1,373 chainNetCanFam2,370 chainNetHg19,370 chainNetMm9,370 chainNetMonDom5,370 cons6way,195 cons6way,915 netAilMel1,370 netCanFam2,367 netHg19,367 netMm9,367 netMonDom5,367 each blastHg18KG,68 chainAilMel1,257 chainCanFam2,255 chainHg19,255 chainMm9,255 chainMonDom5,255 chainNetAilMel1,260 chainNetCanFam2,258 chainNetHg19,258 chainNetMm9,258 chainNetMonDom5,258 cons6way,89 cons6way,105 cons6way,315 cons6way,630 cons6way,1022 cons6way,1326 cons6way,1374 cons6way,1414 cons6way,1487 cons6way,1491 cons6way,1635 cons6way,1683 cons6way,1839 cons6way,1874 cons6way,1927 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 est,214 intronEst,295 mrna,160 nestedRepeats,120 netAilMel1,257 netCanFam2,255 netHg19,255 netMm9,255 netMonDom5,255 early cons6way,2483 ed cons6way,2364 eddy tRNAs,65 tRNAs,394 tRNAs,442 editor cons6way,2268 educated tRNAs,255 effect est,597 intronEst,678 effective cons6way,169 effects cons6way,125 either chainAilMel1,127 chainCanFam2,125 chainHg19,125 chainMm9,125 chainMonDom5,125 chainNetAilMel1,130 chainNetCanFam2,128 chainNetHg19,128 chainNetMm9,128 chainNetMonDom5,128 cons6way,559 cons6way,913 cons6way,922 gap,71 netAilMel1,127 netCanFam2,125 netHg19,125 netMm9,125 netMonDom5,125 rmsk,273 eizirik cons6way,2458 el phastConsElements6way,3 electronic nestedRepeats,348 rmsk,371 element cons6way,95 cons6way,1928 cons6wayViewphastcons,1 rmsk,228 elements cons6way,59 cons6way,174 cons6way,1826 cons6way,1891 cons6way,1894 cons6way,1907 cons6way,2238 cons6wayViewelements,2 nestedRepeats,352 nestedRepeats,380 phastConsElements6way,5 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 tRNAs,302 eliminate est,669 intronEst,750 eliminating intronEst,109 elnitski cons6way,2351 else cons6way,998 em cons6way,1575 emerged chainAilMel1,820 chainCanFam2,817 chainHg19,817 chainMm9,817 chainMonDom5,817 chainNetAilMel1,823 chainNetCanFam2,820 chainNetHg19,820 chainNetMm9,820 chainNetMonDom5,820 est,567 intronEst,648 netAilMel1,820 netCanFam2,817 netHg19,817 netMm9,817 netMonDom5,817 enable cons6way,1508 enables cons6way,752 enclose cons6way,945 encode tRNAs,171 encodes tRNAs,143 end est,517 est,535 est,545 est,586 intronEst,598 intronEst,616 intronEst,626 intronEst,667 rmsk,245 ends intronEst,90 ensembl cons6way,1302 enter chainAilMel1,364 chainCanFam2,361 chainHg19,361 chainMm9,361 chainMonDom5,361 chainNetAilMel1,367 chainNetCanFam2,364 chainNetHg19,364 chainNetMm9,364 chainNetMonDom5,364 netAilMel1,364 netCanFam2,361 netHg19,361 netMm9,361 netMonDom5,361 entered est,251 est,261 intronEst,332 intronEst,342 mrna,197 mrna,207 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 entry cons6way,1485 equal cons6way,1934 ermolaeva refGene,362 xenoRefGene,327 especially est,152 intronEst,233 mrna,98 est est,9 est,84 est,180 est,448 est,611 est,632 est,683 est,729 intronEst,11 intronEst,60 intronEst,75 intronEst,100 intronEst,125 intronEst,165 intronEst,261 intronEst,529 intronEst,692 intronEst,713 intronEst,764 intronEst,813 mrna,9 establish cons6way,1176 estimates cons6way,85 ests est,2 est,4 est,20 est,26 est,190 est,295 est,310 est,351 est,369 est,487 est,532 est,543 est,644 est,671 intronEst,2 intronEst,4 intronEst,22 intronEst,38 intronEst,113 intronEst,119 intronEst,153 intronEst,271 intronEst,376 intronEst,391 intronEst,432 intronEst,450 intronEst,568 intronEst,613 intronEst,624 intronEst,725 intronEst,752 et cons6way,1790 cons6way,2140 cons6way,2234 cons6way,2365 cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 nscanGene,196 refGene,372 xenoRefGene,337 eukaryotes tRNAs,101 eukaryotic tRNAs,483 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 evaluating cons6way,184 even est,606 est,613 intronEst,687 intronEst,694 every chainAilMel1,272 chainCanFam2,270 chainHg19,270 chainMm9,270 chainMonDom5,270 chainNetAilMel1,275 chainNetCanFam2,273 chainNetHg19,273 chainNetMm9,273 chainNetMonDom5,273 netAilMel1,272 netCanFam2,270 netHg19,270 netMm9,270 netMonDom5,270 evidence intronEst,63 evol cons6way,2179 evolution chainAilMel1,1053 chainCanFam2,1050 chainHg19,1050 chainMm9,1050 chainMonDom5,1050 chainNetAilMel1,1056 chainNetCanFam2,1053 chainNetHg19,1053 chainNetMm9,1053 chainNetMonDom5,1053 cons6way,216 cons6way,229 cons6way,276 cons6way,2176 cons6way,2273 cons6way,2288 cons6way,2314 netAilMel1,1053 netCanFam2,1050 netHg19,1050 netMm9,1050 netMonDom5,1050 nscanGene,82 evolutionarily cons6way,2236 evolutionary cons6way,22 cons6way,375 cons6way,829 cons6way,1540 cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 evolving cons6way,1544 ew blastHg18KG,160 est,756 intronEst,840 mrna,473 exact tRNAs,264 example est,183 est,236 intronEst,264 intronEst,317 mrna,129 mrna,182 rmsk,256 exception gap,39 excessive cons6way,828 exclude est,131 est,336 est,342 intronEst,212 intronEst,417 intronEst,423 mrna,77 mrna,282 mrna,288 excluding cons6way,703 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 exist chainAilMel1,403 chainCanFam2,400 chainHg19,400 chainMm9,400 chainMonDom5,400 chainNetAilMel1,406 chainNetCanFam2,403 chainNetHg19,403 chainNetMm9,403 chainNetMonDom5,403 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,104 netAilMel1,403 netCanFam2,400 netHg19,400 netMm9,400 netMonDom5,400 exon augustusGene,86 blastHg18KG,58 blastHg18KG,69 blastHg18KG,101 blastHg18KG,114 exons blastHg18KG,84 chainAilMel1,49 chainCanFam2,48 chainHg19,48 chainMm9,48 chainMonDom5,48 chainNetAilMel1,52 chainNetCanFam2,51 chainNetHg19,51 chainNetMm9,51 chainNetMonDom5,51 netAilMel1,49 netCanFam2,48 netHg19,48 netMm9,48 netMonDom5,48 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expansions simpleRepeat,48 expected cons6way,218 cons6way,228 cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expected-length cons6way,1798 expense intronEst,107 explanation cons6way,622 gc5Base,66 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 expressed est,17 est,191 intronEst,19 intronEst,272 mrna,137 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extended blastHg18KG,117 extending blastHg18KG,103 extends nscanGene,60 extracted cons6way,1586 nestedRepeats,23 f chainAilMel1,1026 chainCanFam2,1023 chainHg19,1023 chainMm9,1023 chainMonDom5,1023 chainNetAilMel1,1029 chainNetCanFam2,1026 chainNetHg19,1026 chainNetMm9,1026 chainNetMonDom5,1026 cons6way,2391 gold,151 netAilMel1,1026 netCanFam2,1023 netHg19,1023 netMm9,1023 netMonDom5,1023 nscanGene,147 refGene,359 tRNAs,473 xenoRefGene,324 factor est,228 intronEst,309 mrna,174 false tRNAs,87 familiaris cons6way,487 family rmsk,249 faq augustusGene,45 nestedRepeats,298 refGene,74 rmsk,321 farrell refGene,364 xenoRefGene,329 fast-evolving cons6way,252 faster cons6way,215 feature chainAilMel1,243 chainCanFam2,241 chainHg19,241 chainMm9,241 chainMonDom5,241 chainNetAilMel1,246 chainNetCanFam2,244 chainNetHg19,244 chainNetMm9,244 chainNetMonDom5,244 est,386 intronEst,467 mrna,332 netAilMel1,243 netCanFam2,241 netHg19,241 netMm9,241 netMonDom5,241 refGene,179 refGene,212 xenoRefGene,145 xenoRefGene,178 features refGene,115 tRNAs,185 tRNAs,218 tRNAs,238 tRNAs,276 xenoRefGene,81 feb chainHg19,4 chainHg19,66 chainHg19,300 chainNetHg19,5 chainNetHg19,69 chainNetHg19,303 chainNetHg19Viewchain,3 chainNetHg19Viewnet,3 cons6way,498 cons6way,2294 netHg19,4 netHg19,66 netHg19,300 fed chainAilMel1,613 chainCanFam2,610 chainHg19,610 chainMm9,610 chainMonDom5,610 chainNetAilMel1,616 chainNetCanFam2,613 chainNetHg19,613 chainNetMm9,613 chainNetMonDom5,613 netAilMel1,613 netCanFam2,610 netHg19,610 netMm9,610 netMonDom5,610 feedback refGene,41 felis ctgPos2,19 felsenstein cons6way,1652 cons6way,2160 fewer cons6way,736 tRNAs,91 fichant tRNAs,32 tRNAs,417 field augustusGene,120 cons6way,1953 cons6way,1993 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 gap,165 files ctgPos2,23 fill chainAilMel1,844 chainAilMel1,877 chainCanFam2,841 chainCanFam2,874 chainHg19,841 chainHg19,874 chainMm9,841 chainMm9,874 chainMonDom5,841 chainMonDom5,874 chainNetAilMel1,847 chainNetAilMel1,880 chainNetCanFam2,844 chainNetCanFam2,877 chainNetHg19,844 chainNetHg19,877 chainNetMm9,844 chainNetMm9,877 chainNetMonDom5,844 chainNetMonDom5,877 netAilMel1,844 netAilMel1,877 netCanFam2,841 netCanFam2,874 netHg19,841 netHg19,874 netMm9,841 netMm9,874 netMonDom5,841 netMonDom5,874 filled chainAilMel1,412 chainAilMel1,431 chainAilMel1,826 chainAilMel1,899 chainCanFam2,409 chainCanFam2,428 chainCanFam2,823 chainCanFam2,896 chainHg19,409 chainHg19,428 chainHg19,823 chainHg19,896 chainMm9,409 chainMm9,428 chainMm9,823 chainMm9,896 chainMonDom5,409 chainMonDom5,428 chainMonDom5,823 chainMonDom5,896 chainNetAilMel1,415 chainNetAilMel1,434 chainNetAilMel1,829 chainNetAilMel1,902 chainNetCanFam2,412 chainNetCanFam2,431 chainNetCanFam2,826 chainNetCanFam2,899 chainNetHg19,412 chainNetHg19,431 chainNetHg19,826 chainNetHg19,899 chainNetMm9,412 chainNetMm9,431 chainNetMm9,826 chainNetMm9,899 chainNetMonDom5,412 chainNetMonDom5,431 chainNetMonDom5,826 chainNetMonDom5,899 cons6way,1393 netAilMel1,412 netAilMel1,431 netAilMel1,826 netAilMel1,899 netCanFam2,409 netCanFam2,428 netCanFam2,823 netCanFam2,896 netHg19,409 netHg19,428 netHg19,823 netHg19,896 netMm9,409 netMm9,428 netMm9,823 netMm9,896 netMonDom5,409 netMonDom5,428 netMonDom5,823 netMonDom5,896 filter chainAilMel1,376 chainCanFam2,373 chainHg19,373 chainMm9,373 chainMonDom5,373 chainNetAilMel1,379 chainNetCanFam2,376 chainNetHg19,376 chainNetMm9,376 chainNetMonDom5,376 est,116 est,165 est,178 est,187 est,234 est,275 est,299 est,317 est,355 est,373 intronEst,197 intronEst,246 intronEst,259 intronEst,268 intronEst,315 intronEst,356 intronEst,380 intronEst,398 intronEst,436 intronEst,454 mrna,62 mrna,111 mrna,124 mrna,133 mrna,180 mrna,221 mrna,245 mrna,263 mrna,301 mrna,319 netAilMel1,376 netCanFam2,373 netHg19,373 netMm9,373 netMonDom5,373 filtered cons6way,1603 est,338 intronEst,419 mrna,284 filtering est,277 intronEst,358 mrna,223 filters tRNAs,55 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 finally blastHg18KG,80 find chainAilMel1,656 chainCanFam2,653 chainHg19,653 chainMm9,653 chainMonDom5,653 chainNetAilMel1,659 chainNetCanFam2,656 chainNetHg19,656 chainNetMm9,656 chainNetMonDom5,656 netAilMel1,656 netCanFam2,653 netHg19,653 netMm9,653 netMonDom5,653 rmsk,117 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finding augustusGene,306 chainAilMel1,282 chainCanFam2,280 chainHg19,280 chainMm9,280 chainMonDom5,280 chainNetAilMel1,285 chainNetCanFam2,283 chainNetHg19,283 chainNetMm9,283 chainNetMonDom5,283 netAilMel1,282 netCanFam2,280 netHg19,280 netMm9,280 netMonDom5,280 finds cons6way,1347 finished gold,153 finishing gap,50 first blastHg18KG,36 chainAilMel1,784 chainCanFam2,781 chainHg19,781 chainMm9,781 chainMonDom5,781 chainNetAilMel1,787 chainNetCanFam2,784 chainNetHg19,784 chainNetMm9,784 chainNetMonDom5,784 cons6way,200 netAilMel1,784 netCanFam2,781 netHg19,781 netMm9,781 netMonDom5,781 fish augustusGene,201 fit chainAilMel1,804 chainCanFam2,801 chainHg19,801 chainMm9,801 chainMonDom5,801 chainNetAilMel1,807 chainNetCanFam2,804 chainNetHg19,804 chainNetMm9,804 chainNetMonDom5,804 nestedRepeats,175 netAilMel1,804 netCanFam2,801 netHg19,801 netMm9,801 netMonDom5,801 fixed cons6way,1765 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 flanking cons6way,112 flicek nscanGene,223 fly augustusGene,214 fold tRNAs,308 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following chainAilMel1,665 chainCanFam2,662 chainHg19,662 chainMm9,662 chainMonDom5,662 chainNetAilMel1,668 chainNetCanFam2,665 chainNetHg19,665 chainNetMm9,665 chainNetMonDom5,665 cons6way,773 cons6way,1141 cons6way,1265 cons6way,1437 cons6way,2025 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,104 netAilMel1,665 netCanFam2,662 netHg19,662 netMm9,662 netMonDom5,662 tRNAs,364 follows cons6way,902 est,49 intronEst,133 mrna,30 refGene,81 xenoRefGene,47 for augustusGene,34 augustusGene,52 augustusGene,68 augustusGene,80 augustusGene,175 augustusGene,184 augustusGene,192 augustusGene,232 augustusGene,253 augustusGene,260 augustusGene,274 blastHg18KG,147 chainAilMel1,256 chainAilMel1,271 chainAilMel1,281 chainAilMel1,288 chainAilMel1,489 chainCanFam2,254 chainCanFam2,269 chainCanFam2,279 chainCanFam2,286 chainCanFam2,486 chainHg19,254 chainHg19,269 chainHg19,279 chainHg19,286 chainHg19,486 chainMm9,254 chainMm9,269 chainMm9,279 chainMm9,286 chainMm9,486 chainMonDom5,254 chainMonDom5,269 chainMonDom5,279 chainMonDom5,286 chainMonDom5,486 chainNetAilMel1,259 chainNetAilMel1,274 chainNetAilMel1,284 chainNetAilMel1,291 chainNetAilMel1,492 chainNetCanFam2,257 chainNetCanFam2,272 chainNetCanFam2,282 chainNetCanFam2,289 chainNetCanFam2,489 chainNetHg19,257 chainNetHg19,272 chainNetHg19,282 chainNetHg19,289 chainNetHg19,489 chainNetMm9,257 chainNetMm9,272 chainNetMm9,282 chainNetMm9,289 chainNetMm9,489 chainNetMonDom5,257 chainNetMonDom5,272 chainNetMonDom5,282 chainNetMonDom5,289 chainNetMonDom5,489 cons6way,34 cons6way,170 cons6way,183 cons6way,314 cons6way,436 cons6way,445 cons6way,524 cons6way,620 cons6way,1118 cons6way,1163 cons6way,1196 cons6way,1208 cons6way,1222 cons6way,1271 cons6way,1295 cons6way,1313 cons6way,1325 cons6way,1366 cons6way,1373 cons6way,1402 cons6way,1413 cons6way,1420 cons6way,1476 cons6way,1486 cons6way,1560 cons6way,1670 cons6way,1676 cons6way,1728 cons6way,1814 cons6way,1821 cons6way,1881 cons6way,2286 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 est,53 est,111 est,182 est,213 est,235 est,408 est,419 est,432 est,480 gc5Base,64 intronEst,114 intronEst,137 intronEst,192 intronEst,263 intronEst,294 intronEst,316 intronEst,489 intronEst,500 intronEst,513 intronEst,561 microsat,95 mrna,34 mrna,57 mrna,128 mrna,159 mrna,181 mrna,345 mrna,358 mrna,371 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netAilMel1,256 netAilMel1,271 netAilMel1,281 netAilMel1,288 netAilMel1,489 netCanFam2,254 netCanFam2,269 netCanFam2,279 netCanFam2,286 netCanFam2,486 netHg19,254 netHg19,269 netHg19,279 netHg19,286 netHg19,486 netMm9,254 netMm9,269 netMm9,279 netMm9,286 netMm9,486 netMonDom5,254 netMonDom5,269 netMonDom5,279 netMonDom5,286 netMonDom5,486 nscanGene,68 nscanGene,107 nscanGene,123 nscanGene,129 refGene,42 refGene,58 refGene,63 refGene,85 refGene,207 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 simpleRepeat,30 simpleRepeat,56 tRNAs,100 tRNAs,230 tRNAs,447 xenoRefGene,19 xenoRefGene,51 xenoRefGene,173 form cons6way,1978 format chainAilMel1,604 chainCanFam2,601 chainHg19,601 chainMm9,601 chainMonDom5,601 chainNetAilMel1,607 chainNetCanFam2,604 chainNetHg19,604 chainNetMm9,604 chainNetMonDom5,604 cons6way,534 cons6way,541 cons6way,545 cons6way,1473 netAilMel1,604 netCanFam2,601 netHg19,601 netMm9,601 netMonDom5,601 formerly cons6way,2030 cons6way,2388 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainAilMel1,438 chainCanFam2,435 chainHg19,435 chainMm9,435 chainMonDom5,435 chainNetAilMel1,441 chainNetCanFam2,438 chainNetHg19,438 chainNetMm9,438 chainNetMonDom5,438 netAilMel1,438 netCanFam2,435 netHg19,435 netMm9,435 netMonDom5,435 fosmid gold,37 found augustusGene,100 cons6way,1787 mrna,412 four chainAilMel1,506 chainCanFam2,503 chainHg19,503 chainMm9,503 chainMonDom5,503 chainNetAilMel1,509 chainNetCanFam2,506 chainNetHg19,506 chainNetMm9,506 chainNetMonDom5,506 netAilMel1,506 netCanFam2,503 netHg19,503 netMm9,503 netMonDom5,503 fragment gap,109 fragments est,39 gold,4 intronEst,51 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 frame cons6way,1178 frames cons6way,1162 cons6way,1195 cons6way,1221 cons6way,1294 framing cons6way,1503 cons6way,2130 from augustusGene,19 blastHg18KG,22 blastHg18KG,40 chainAilMel1,175 chainAilMel1,300 chainAilMel1,558 chainAilMel1,580 chainAilMel1,761 chainAilMel1,934 chainAilMel1,966 chainCanFam2,173 chainCanFam2,298 chainCanFam2,555 chainCanFam2,577 chainCanFam2,758 chainCanFam2,931 chainCanFam2,963 chainHg19,173 chainHg19,298 chainHg19,555 chainHg19,577 chainHg19,758 chainHg19,931 chainHg19,963 chainMm9,173 chainMm9,298 chainMm9,555 chainMm9,577 chainMm9,758 chainMm9,931 chainMm9,963 chainMonDom5,173 chainMonDom5,298 chainMonDom5,555 chainMonDom5,577 chainMonDom5,758 chainMonDom5,931 chainMonDom5,963 chainNetAilMel1,178 chainNetAilMel1,303 chainNetAilMel1,561 chainNetAilMel1,583 chainNetAilMel1,764 chainNetAilMel1,937 chainNetAilMel1,969 chainNetCanFam2,176 chainNetCanFam2,301 chainNetCanFam2,558 chainNetCanFam2,580 chainNetCanFam2,761 chainNetCanFam2,934 chainNetCanFam2,966 chainNetHg19,176 chainNetHg19,301 chainNetHg19,558 chainNetHg19,580 chainNetHg19,761 chainNetHg19,934 chainNetHg19,966 chainNetMm9,176 chainNetMm9,301 chainNetMm9,558 chainNetMm9,580 chainNetMm9,761 chainNetMm9,934 chainNetMm9,966 chainNetMonDom5,176 chainNetMonDom5,301 chainNetMonDom5,558 chainNetMonDom5,580 chainNetMonDom5,761 chainNetMonDom5,934 chainNetMonDom5,966 cons6way,30 cons6way,360 cons6way,415 cons6way,705 cons6way,928 cons6way,951 cons6way,966 cons6way,1120 cons6way,1167 cons6way,1330 cons6way,1380 cons6way,1569 cons6way,1587 cons6way,1597 cons6way,1646 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 ctgPos2,17 est,404 est,452 est,473 est,583 est,601 est,645 est,728 gold,3 gold,45 intronEst,485 intronEst,533 intronEst,554 intronEst,664 intronEst,682 intronEst,726 intronEst,812 mrna,5 mrna,445 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netAilMel1,175 netAilMel1,300 netAilMel1,558 netAilMel1,580 netAilMel1,761 netAilMel1,934 netAilMel1,966 netCanFam2,173 netCanFam2,298 netCanFam2,555 netCanFam2,577 netCanFam2,758 netCanFam2,931 netCanFam2,963 netHg19,173 netHg19,298 netHg19,555 netHg19,577 netHg19,758 netHg19,931 netHg19,963 netMm9,173 netMm9,298 netMm9,555 netMm9,577 netMm9,758 netMm9,931 netMm9,963 netMonDom5,173 netMonDom5,298 netMonDom5,555 netMonDom5,577 netMonDom5,758 netMonDom5,931 netMonDom5,963 nscanGene,49 refGene,22 refGene,199 refGene,318 rmsk,86 tRNAs,130 xenoRefGene,25 xenoRefGene,165 xenoRefGene,284 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 full chainAilMel1,237 chainAilMel1,382 chainCanFam2,235 chainCanFam2,379 chainHg19,235 chainHg19,379 chainMm9,235 chainMm9,379 chainMonDom5,235 chainMonDom5,379 chainNetAilMel1,240 chainNetAilMel1,385 chainNetCanFam2,238 chainNetCanFam2,382 chainNetHg19,238 chainNetHg19,382 chainNetMm9,238 chainNetMm9,382 chainNetMonDom5,238 chainNetMonDom5,382 cons6way,571 cons6way,655 cons6way,2017 nestedRepeats,118 netAilMel1,237 netAilMel1,382 netCanFam2,235 netCanFam2,379 netHg19,235 netHg19,379 netMm9,235 netMm9,379 netMonDom5,235 netMonDom5,379 rmsk,140 function cons6way,1975 tRNAs,154 functional tRNAs,145 tRNAs,172 tRNAs,221 furthermore augustusGene,64 future rmsk,272 g cons6way,2217 cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 gc5Base,20 microsat,115 simpleRepeat,75 tRNAs,477 g-31-125100-114 chainAilMel1,673 chainCanFam2,670 chainHg19,670 chainMm9,670 chainMonDom5,670 chainNetAilMel1,676 chainNetCanFam2,673 chainNetHg19,673 chainNetMm9,673 chainNetMonDom5,673 netAilMel1,673 netCanFam2,670 netHg19,670 netMm9,670 netMonDom5,670 ga cons6way,2163 tRNAs,418 galt cons6way,2111 gambiae augustusGene,219 gap blastHg18KG,92 blastHg18KG,96 chainAilMel1,78 chainAilMel1,88 chainAilMel1,187 chainAilMel1,475 chainAilMel1,487 chainAilMel1,510 chainAilMel1,528 chainAilMel1,543 chainAilMel1,560 chainAilMel1,697 chainAilMel1,828 chainCanFam2,76 chainCanFam2,86 chainCanFam2,185 chainCanFam2,472 chainCanFam2,484 chainCanFam2,507 chainCanFam2,525 chainCanFam2,540 chainCanFam2,557 chainCanFam2,694 chainCanFam2,825 chainHg19,76 chainHg19,86 chainHg19,185 chainHg19,472 chainHg19,484 chainHg19,507 chainHg19,525 chainHg19,540 chainHg19,557 chainHg19,694 chainHg19,825 chainMm9,76 chainMm9,86 chainMm9,185 chainMm9,472 chainMm9,484 chainMm9,507 chainMm9,525 chainMm9,540 chainMm9,557 chainMm9,694 chainMm9,825 chainMonDom5,76 chainMonDom5,86 chainMonDom5,185 chainMonDom5,472 chainMonDom5,484 chainMonDom5,507 chainMonDom5,525 chainMonDom5,540 chainMonDom5,557 chainMonDom5,694 chainMonDom5,825 chainNetAilMel1,81 chainNetAilMel1,91 chainNetAilMel1,190 chainNetAilMel1,478 chainNetAilMel1,490 chainNetAilMel1,513 chainNetAilMel1,531 chainNetAilMel1,546 chainNetAilMel1,563 chainNetAilMel1,700 chainNetAilMel1,831 chainNetCanFam2,79 chainNetCanFam2,89 chainNetCanFam2,188 chainNetCanFam2,475 chainNetCanFam2,487 chainNetCanFam2,510 chainNetCanFam2,528 chainNetCanFam2,543 chainNetCanFam2,560 chainNetCanFam2,697 chainNetCanFam2,828 chainNetHg19,79 chainNetHg19,89 chainNetHg19,188 chainNetHg19,475 chainNetHg19,487 chainNetHg19,510 chainNetHg19,528 chainNetHg19,543 chainNetHg19,560 chainNetHg19,697 chainNetHg19,828 chainNetMm9,79 chainNetMm9,89 chainNetMm9,188 chainNetMm9,475 chainNetMm9,487 chainNetMm9,510 chainNetMm9,528 chainNetMm9,543 chainNetMm9,560 chainNetMm9,697 chainNetMm9,828 chainNetMonDom5,79 chainNetMonDom5,89 chainNetMonDom5,188 chainNetMonDom5,475 chainNetMonDom5,487 chainNetMonDom5,510 chainNetMonDom5,528 chainNetMonDom5,543 chainNetMonDom5,560 chainNetMonDom5,697 chainNetMonDom5,828 cons6way,473 cons6way,743 cons6way,823 cons6way,855 cons6way,1063 cons6way,1073 cons6way,1086 cons6way,2126 est,427 gap,1 gap,2 gap,75 gap,86 gap,99 gap,110 gap,115 gap,136 intronEst,508 mrna,366 netAilMel1,78 netAilMel1,88 netAilMel1,187 netAilMel1,475 netAilMel1,487 netAilMel1,510 netAilMel1,528 netAilMel1,543 netAilMel1,560 netAilMel1,697 netAilMel1,828 netCanFam2,76 netCanFam2,86 netCanFam2,185 netCanFam2,472 netCanFam2,484 netCanFam2,507 netCanFam2,525 netCanFam2,540 netCanFam2,557 netCanFam2,694 netCanFam2,825 netHg19,76 netHg19,86 netHg19,185 netHg19,472 netHg19,484 netHg19,507 netHg19,525 netHg19,540 netHg19,557 netHg19,694 netHg19,825 netMm9,76 netMm9,86 netMm9,185 netMm9,472 netMm9,484 netMm9,507 netMm9,525 netMm9,540 netMm9,557 netMm9,694 netMm9,825 netMonDom5,76 netMonDom5,86 netMonDom5,185 netMonDom5,472 netMonDom5,484 netMonDom5,507 netMonDom5,525 netMonDom5,540 netMonDom5,557 netMonDom5,694 netMonDom5,825 gapless chainAilMel1,640 chainCanFam2,637 chainHg19,637 chainMm9,637 chainMonDom5,637 chainNetAilMel1,643 chainNetCanFam2,640 chainNetHg19,640 chainNetMm9,640 chainNetMonDom5,640 cons6way,1352 netAilMel1,640 netCanFam2,637 netHg19,637 netMm9,637 netMonDom5,637 gaps chainAilMel1,84 chainAilMel1,95 chainAilMel1,106 chainAilMel1,140 chainAilMel1,164 chainAilMel1,209 chainAilMel1,220 chainAilMel1,402 chainAilMel1,424 chainAilMel1,451 chainAilMel1,883 chainAilMel1,889 chainCanFam2,82 chainCanFam2,93 chainCanFam2,104 chainCanFam2,138 chainCanFam2,162 chainCanFam2,207 chainCanFam2,218 chainCanFam2,399 chainCanFam2,421 chainCanFam2,448 chainCanFam2,880 chainCanFam2,886 chainHg19,82 chainHg19,93 chainHg19,104 chainHg19,138 chainHg19,162 chainHg19,207 chainHg19,218 chainHg19,399 chainHg19,421 chainHg19,448 chainHg19,880 chainHg19,886 chainMm9,82 chainMm9,93 chainMm9,104 chainMm9,138 chainMm9,162 chainMm9,207 chainMm9,218 chainMm9,399 chainMm9,421 chainMm9,448 chainMm9,880 chainMm9,886 chainMonDom5,82 chainMonDom5,93 chainMonDom5,104 chainMonDom5,138 chainMonDom5,162 chainMonDom5,207 chainMonDom5,218 chainMonDom5,399 chainMonDom5,421 chainMonDom5,448 chainMonDom5,880 chainMonDom5,886 chainNetAilMel1,87 chainNetAilMel1,98 chainNetAilMel1,109 chainNetAilMel1,143 chainNetAilMel1,167 chainNetAilMel1,212 chainNetAilMel1,223 chainNetAilMel1,405 chainNetAilMel1,427 chainNetAilMel1,454 chainNetAilMel1,886 chainNetAilMel1,892 chainNetCanFam2,85 chainNetCanFam2,96 chainNetCanFam2,107 chainNetCanFam2,141 chainNetCanFam2,165 chainNetCanFam2,210 chainNetCanFam2,221 chainNetCanFam2,402 chainNetCanFam2,424 chainNetCanFam2,451 chainNetCanFam2,883 chainNetCanFam2,889 chainNetHg19,85 chainNetHg19,96 chainNetHg19,107 chainNetHg19,141 chainNetHg19,165 chainNetHg19,210 chainNetHg19,221 chainNetHg19,402 chainNetHg19,424 chainNetHg19,451 chainNetHg19,883 chainNetHg19,889 chainNetMm9,85 chainNetMm9,96 chainNetMm9,107 chainNetMm9,141 chainNetMm9,165 chainNetMm9,210 chainNetMm9,221 chainNetMm9,402 chainNetMm9,424 chainNetMm9,451 chainNetMm9,883 chainNetMm9,889 chainNetMonDom5,85 chainNetMonDom5,96 chainNetMonDom5,107 chainNetMonDom5,141 chainNetMonDom5,165 chainNetMonDom5,210 chainNetMonDom5,221 chainNetMonDom5,402 chainNetMonDom5,424 chainNetMonDom5,451 chainNetMonDom5,883 chainNetMonDom5,889 cons6way,299 cons6way,755 cons6way,1030 cons6way,1036 cons6way,1392 cons6way,1457 gap,11 gap,35 gap,43 gap,52 gap,108 gap,168 gold,103 netAilMel1,84 netAilMel1,95 netAilMel1,106 netAilMel1,140 netAilMel1,164 netAilMel1,209 netAilMel1,220 netAilMel1,402 netAilMel1,424 netAilMel1,451 netAilMel1,883 netAilMel1,889 netCanFam2,82 netCanFam2,93 netCanFam2,104 netCanFam2,138 netCanFam2,162 netCanFam2,207 netCanFam2,218 netCanFam2,399 netCanFam2,421 netCanFam2,448 netCanFam2,880 netCanFam2,886 netHg19,82 netHg19,93 netHg19,104 netHg19,138 netHg19,162 netHg19,207 netHg19,218 netHg19,399 netHg19,421 netHg19,448 netHg19,880 netHg19,886 netMm9,82 netMm9,93 netMm9,104 netMm9,138 netMm9,162 netMm9,207 netMm9,218 netMm9,399 netMm9,421 netMm9,448 netMm9,880 netMm9,886 netMonDom5,82 netMonDom5,93 netMonDom5,104 netMonDom5,138 netMonDom5,162 netMonDom5,207 netMonDom5,218 netMonDom5,399 netMonDom5,421 netMonDom5,448 netMonDom5,880 netMonDom5,886 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5Base,1 gc5Base,3 gc5Base,13 gc5Base,30 gca_000001445.1 gold,26 genbank est,22 est,646 est,757 est,781 intronEst,24 intronEst,727 intronEst,841 intronEst,865 mrna,6 mrna,20 mrna,384 mrna,474 mrna,498 gene augustusGene,5 augustusGene,10 augustusGene,40 augustusGene,112 augustusGene,157 augustusGene,163 augustusGene,305 augustusGene,320 blastHg18KG,11 cons6way,1147 cons6way,1266 cons6way,1296 cons6way,1298 cons6way,1310 cons6way,1601 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 nscanGene,3 nscanGene,7 nscanGene,13 nscanGene,18 nscanGene,57 nscanGene,163 nscanGene,233 nscanGene,250 refGene,7 refGene,43 refGene,69 refGene,86 refGene,140 refGene,155 refGene,160 refGene,188 refGene,217 tRNAs,11 tRNAs,141 xenoRefGene,8 xenoRefGene,52 xenoRefGene,106 xenoRefGene,121 xenoRefGene,126 xenoRefGene,154 xenoRefGene,183 gene-rich gc5Base,36 genepredtomafframes cons6way,2101 general cons6way,1745 cons6way,2144 est,529 gap,123 intronEst,610 generally rmsk,72 generate est,640 intronEst,721 nestedRepeats,261 nestedRepeats,320 nscanGene,54 rmsk,343 generated cons6way,42 cons6way,390 cons6way,1324 cons6way,1494 cons6way,1564 cons6way,1695 cons6way,1919 cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 nestedRepeats,282 refGene,322 rmsk,289 xenoRefGene,288 generating augustusGene,189 generator cons6way,2108 genes augustusGene,8 augustusGene,44 blastHg18KG,9 blastHg18KG,27 blastHg18KG,33 blastHg18KG,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 est,42 intronEst,54 nscanGene,5 refGene,2 refGene,4 refGene,5 refGene,12 refGene,20 refGene,73 refGene,226 refGene,234 refGene,245 simpleRepeat,41 tRNAs,2 tRNAs,5 tRNAs,9 tRNAs,18 tRNAs,174 tRNAs,244 tRNAs,286 tRNAs,304 tRNAs,376 tRNAs,424 tRNAs,453 tRNAs,485 xenoRefGene,5 xenoRefGene,6 xenoRefGene,18 xenoRefGene,192 xenoRefGene,200 xenoRefGene,211 genescat cons6way,1301 genesdog cons6way,1303 geneshuman cons6way,1306 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic nestedRepeats,52 rmsk,88 genetics cons6way,2292 genome augustusGene,31 blastHg18KG,51 chainAilMel1,20 chainAilMel1,75 chainAilMel1,204 chainAilMel1,277 chainAilMel1,290 chainAilMel1,782 chainAilMel1,1103 chainCanFam2,19 chainCanFam2,73 chainCanFam2,202 chainCanFam2,275 chainCanFam2,288 chainCanFam2,779 chainCanFam2,1100 chainHg19,19 chainHg19,73 chainHg19,202 chainHg19,275 chainHg19,288 chainHg19,779 chainHg19,1100 chainMm9,19 chainMm9,73 chainMm9,202 chainMm9,275 chainMm9,288 chainMm9,779 chainMm9,1100 chainMonDom5,19 chainMonDom5,73 chainMonDom5,202 chainMonDom5,275 chainMonDom5,288 chainMonDom5,779 chainMonDom5,1100 chainNetAilMel1,23 chainNetAilMel1,78 chainNetAilMel1,207 chainNetAilMel1,280 chainNetAilMel1,293 chainNetAilMel1,785 chainNetAilMel1,1106 chainNetCanFam2,22 chainNetCanFam2,76 chainNetCanFam2,205 chainNetCanFam2,278 chainNetCanFam2,291 chainNetCanFam2,782 chainNetCanFam2,1103 chainNetHg19,22 chainNetHg19,76 chainNetHg19,205 chainNetHg19,278 chainNetHg19,291 chainNetHg19,782 chainNetHg19,1103 chainNetMm9,22 chainNetMm9,76 chainNetMm9,205 chainNetMm9,278 chainNetMm9,291 chainNetMm9,782 chainNetMm9,1103 chainNetMonDom5,22 chainNetMonDom5,76 chainNetMonDom5,205 chainNetMonDom5,278 chainNetMonDom5,291 chainNetMonDom5,782 chainNetMonDom5,1103 cons6way,430 cons6way,443 cons6way,515 cons6way,635 cons6way,798 cons6way,990 cons6way,1169 cons6way,1322 cons6way,1390 cons6way,1639 cons6way,1736 cons6way,2203 cons6way,2246 cons6way,2376 cons6way,2443 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 ctgPos2,37 est,25 est,651 est,804 gap,20 gap,31 gold,19 gold,30 gold,33 gold,65 gold,70 intronEst,27 intronEst,37 intronEst,732 intronEst,888 mrna,23 mrna,391 mrna,521 nestedRepeats,405 netAilMel1,20 netAilMel1,75 netAilMel1,204 netAilMel1,277 netAilMel1,290 netAilMel1,782 netAilMel1,1103 netCanFam2,19 netCanFam2,73 netCanFam2,202 netCanFam2,275 netCanFam2,288 netCanFam2,779 netCanFam2,1100 netHg19,19 netHg19,73 netHg19,202 netHg19,275 netHg19,288 netHg19,779 netHg19,1100 netMm9,19 netMm9,73 netMm9,202 netMm9,275 netMm9,288 netMm9,779 netMm9,1100 netMonDom5,19 netMonDom5,73 netMonDom5,202 netMonDom5,275 netMonDom5,288 netMonDom5,779 netMonDom5,1100 nscanGene,44 nscanGene,64 nscanGene,91 nscanGene,201 nscanGene,256 nscanGene,258 refGene,257 refGene,341 rmsk,428 xenoRefGene,223 xenoRefGene,306 genomes chainAilMel1,26 chainAilMel1,585 chainAilMel1,1065 chainCanFam2,25 chainCanFam2,582 chainCanFam2,1062 chainHg19,25 chainHg19,582 chainHg19,1062 chainMm9,25 chainMm9,582 chainMm9,1062 chainMonDom5,25 chainMonDom5,582 chainMonDom5,1062 chainNetAilMel1,29 chainNetAilMel1,588 chainNetAilMel1,1068 chainNetCanFam2,28 chainNetCanFam2,585 chainNetCanFam2,1065 chainNetHg19,28 chainNetHg19,585 chainNetHg19,1065 chainNetMm9,28 chainNetMm9,585 chainNetMm9,1065 chainNetMonDom5,28 chainNetMonDom5,585 chainNetMonDom5,1065 cons6way,2245 cons6way,2326 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netAilMel1,26 netAilMel1,585 netAilMel1,1065 netCanFam2,25 netCanFam2,582 netCanFam2,1062 netHg19,25 netHg19,582 netHg19,1062 netMm9,25 netMm9,582 netMm9,1062 netMonDom5,25 netMonDom5,582 netMonDom5,1062 refGene,410 rmsk,392 rmsk,406 xenoRefGene,375 genomic chainAilMel1,494 chainAilMel1,1017 chainAilMel1,1033 chainCanFam2,491 chainCanFam2,1014 chainCanFam2,1030 chainHg19,491 chainHg19,1014 chainHg19,1030 chainMm9,491 chainMm9,1014 chainMm9,1030 chainMonDom5,491 chainMonDom5,1014 chainMonDom5,1030 chainNetAilMel1,497 chainNetAilMel1,1020 chainNetAilMel1,1036 chainNetCanFam2,494 chainNetCanFam2,1017 chainNetCanFam2,1033 chainNetHg19,494 chainNetHg19,1017 chainNetHg19,1033 chainNetMm9,494 chainNetMm9,1017 chainNetMm9,1033 chainNetMonDom5,494 chainNetMonDom5,1017 chainNetMonDom5,1033 cons6way,880 cons6way,885 cons6way,953 cons6way,969 cons6way,1332 cons6way,1458 cons6way,2369 cons6way,2398 cons6way,2414 est,88 est,406 est,607 est,717 intronEst,72 intronEst,169 intronEst,487 intronEst,688 intronEst,798 mrna,343 mrna,433 netAilMel1,494 netAilMel1,1017 netAilMel1,1033 netCanFam2,491 netCanFam2,1014 netCanFam2,1030 netHg19,491 netHg19,1014 netHg19,1030 netMm9,491 netMm9,1014 netMm9,1030 netMonDom5,491 netMonDom5,1014 netMonDom5,1030 nscanGene,230 refGene,196 refGene,307 tRNAs,108 tRNAs,379 tRNAs,426 tRNAs,455 tRNAs,487 xenoRefGene,162 xenoRefGene,273 genomics chainAilMel1,12 chainCanFam2,11 chainHg19,11 chainMm9,11 chainMonDom5,11 chainNetAilMel1,15 chainNetAilMel1Viewchain,13 chainNetAilMel1Viewnet,13 chainNetCanFam2,14 chainNetCanFam2Viewchain,12 chainNetCanFam2Viewnet,12 chainNetHg19,14 chainNetHg19Viewchain,12 chainNetHg19Viewnet,12 chainNetMm9,14 chainNetMm9Viewchain,12 chainNetMm9Viewnet,12 chainNetMonDom5,14 chainNetMonDom5Viewchain,12 chainNetMonDom5Viewnet,12 cons6way,8 cons6way,55 cons6way,403 cons6wayViewalign,9 cons6wayViewelements,9 cons6wayViewphastcons,10 cons6wayViewphyloP,10 multiz6way,9 netAilMel1,12 netCanFam2,11 netHg19,11 netMm9,11 netMonDom5,11 nscanGene,26 nscanGene,116 phastCons6way,8 phastConsElements6way,7 phyloP6way,10 genuine intronEst,111 gigabases tRNAs,96 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 gish blastHg18KG,155 glire cons6way,362 glires cons6way,322 cons6way,329 cons6way,379 go est,414 est,435 intronEst,495 intronEst,516 mrna,351 mrna,374 refGene,213 xenoRefGene,179 gold gold,98 gold,112 gr refGene,355 xenoRefGene,320 graph cons6way,616 gc5Base,59 gc5Base,78 graphical chainAilMel1,441 chainCanFam2,438 chainHg19,438 chainMm9,438 chainMonDom5,438 chainNetAilMel1,444 chainNetCanFam2,441 chainNetHg19,441 chainNetMm9,441 chainNetMonDom5,441 gold,137 netAilMel1,441 netCanFam2,438 netHg19,438 netMm9,438 netMonDom5,438 rmsk,211 grayscale cons6way,644 cons6way,669 grch37 chainHg19,6 chainHg19,68 chainHg19,302 chainNetHg19,7 chainNetHg19,71 chainNetHg19,305 chainNetHg19Viewchain,5 chainNetHg19Viewnet,5 netHg19,6 netHg19,68 netHg19,302 grch37syntenic cons6way,501 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cons6way,942 cons6way,2363 cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 grey tRNAs,206 gross nscanGene,154 group augustusGene,198 augustusGene,235 chainAilMel1,632 chainCanFam2,629 chainHg19,629 chainMm9,629 chainMonDom5,629 chainNetAilMel1,635 chainNetCanFam2,632 chainNetHg19,632 chainNetMm9,632 chainNetMonDom5,632 cons6way,2047 netAilMel1,632 netCanFam2,629 netHg19,629 netMm9,629 netMonDom5,629 nscanGene,117 groups augustusGene,194 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 intronEst,88 tRNAs,165 gtrnadb tRNAs,111 tRNAs,332 tRNAs,370 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5Base,21 guess tRNAs,256 guides tRNAs,261 h cons6way,2227 cons6way,2362 haas nscanGene,175 hand cons6way,179 hannick nscanGene,186 harbor cons6way,421 cons6way,2076 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainAilMel1,936 chainAilMel1,1093 chainCanFam2,933 chainCanFam2,1090 chainHg19,933 chainHg19,1090 chainMm9,933 chainMm9,1090 chainMonDom5,933 chainMonDom5,1090 chainNetAilMel1,939 chainNetAilMel1,1096 chainNetCanFam2,936 chainNetCanFam2,1093 chainNetHg19,936 chainNetHg19,1093 chainNetMm9,936 chainNetMm9,1093 chainNetMonDom5,936 chainNetMonDom5,1093 cons6way,2433 netAilMel1,936 netAilMel1,1093 netCanFam2,933 netCanFam2,1090 netHg19,933 netHg19,1090 netMm9,933 netMm9,1090 netMonDom5,933 netMonDom5,1090 harris chainAilMel1,1010 chainCanFam2,1007 chainHg19,1007 chainMm9,1007 chainMonDom5,1007 chainNetAilMel1,1013 chainNetCanFam2,1010 chainNetHg19,1010 chainNetMm9,1010 chainNetMonDom5,1010 cons6way,2408 netAilMel1,1010 netCanFam2,1007 netHg19,1007 netMm9,1007 netMonDom5,1007 hart refGene,366 xenoRefGene,331 has cons6way,71 cons6way,424 cons6way,815 cons6way,851 est,114 intronEst,195 mrna,60 nestedRepeats,246 refGene,100 xenoRefGene,66 haussler augustusGene,292 chainAilMel1,971 chainAilMel1,1051 chainAilMel1,1095 chainCanFam2,968 chainCanFam2,1048 chainCanFam2,1092 chainHg19,968 chainHg19,1048 chainHg19,1092 chainMm9,968 chainMm9,1048 chainMm9,1092 chainMonDom5,968 chainMonDom5,1048 chainMonDom5,1092 chainNetAilMel1,974 chainNetAilMel1,1054 chainNetAilMel1,1098 chainNetCanFam2,971 chainNetCanFam2,1051 chainNetCanFam2,1095 chainNetHg19,971 chainNetHg19,1051 chainNetHg19,1095 chainNetMm9,971 chainNetMm9,1051 chainNetMm9,1095 chainNetMonDom5,971 chainNetMonDom5,1051 chainNetMonDom5,1095 cons6way,1660 cons6way,2083 cons6way,2259 cons6way,2312 cons6way,2435 netAilMel1,971 netAilMel1,1051 netAilMel1,1095 netCanFam2,968 netCanFam2,1048 netCanFam2,1092 netHg19,968 netHg19,1048 netHg19,1092 netMm9,968 netMm9,1048 netMm9,1092 netMonDom5,968 netMonDom5,1048 netMonDom5,1092 have chainAilMel1,570 chainCanFam2,567 chainHg19,567 chainMm9,567 chainMonDom5,567 chainNetAilMel1,573 chainNetCanFam2,570 chainNetHg19,570 chainNetMm9,570 chainNetMonDom5,570 cons6way,135 cons6way,153 cons6way,1291 cons6way,1917 intronEst,6 intronEst,87 nestedRepeats,88 netAilMel1,570 netCanFam2,567 netHg19,567 netMm9,567 netMonDom5,567 rmsk,69 rmsk,108 tRNAs,181 tRNAs,214 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 est,690 est,699 intronEst,771 intronEst,780 mrna,406 mrna,415 refGene,280 refGene,289 xenoRefGene,246 xenoRefGene,255 height cons6way,588 help cons6way,367 cons6way,618 cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 gc5Base,61 refGene,59 helpful est,142 intronEst,223 mrna,88 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 here cons6way,1830 rmsk,127 heterochromatic gap,42 hg18 blastHg18KG,31 hg19 chainHg19,7 chainHg19,69 chainHg19,303 chainNetHg19,8 chainNetHg19,72 chainNetHg19,306 chainNetHg19Viewchain,6 chainNetHg19Viewnet,6 cons6way,500 netHg19,7 netHg19,69 netHg19,303 nscanGene,103 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 hiatt refGene,356 xenoRefGene,321 hidden augustusGene,324 cons6way,80 cons6way,2165 cons6way,2262 hide refGene,224 xenoRefGene,190 hierarchy chainAilMel1,819 chainCanFam2,816 chainHg19,816 chainMm9,816 chainMonDom5,816 chainNetAilMel1,822 chainNetCanFam2,819 chainNetHg19,819 chainNetMm9,819 chainNetMonDom5,819 netAilMel1,819 netCanFam2,816 netHg19,816 netMm9,816 netMonDom5,816 high cons6way,1779 gc5Base,29 high-scoring cons6way,1383 higher chainAilMel1,851 chainCanFam2,848 chainHg19,848 chainMm9,848 chainMonDom5,848 chainNetAilMel1,854 chainNetCanFam2,851 chainNetHg19,851 chainNetMm9,851 chainNetMonDom5,851 cons6way,675 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netAilMel1,851 netCanFam2,848 netHg19,848 netMm9,848 netMonDom5,848 rmsk,230 higher-level chainAilMel1,868 chainCanFam2,865 chainHg19,865 chainMm9,865 chainMonDom5,865 chainNetAilMel1,871 chainNetCanFam2,868 chainNetHg19,868 chainNetMm9,868 chainNetMonDom5,868 netAilMel1,868 netCanFam2,865 netHg19,865 netMm9,865 netMonDom5,865 higher-scoring chainAilMel1,812 chainAilMel1,831 chainCanFam2,809 chainCanFam2,828 chainHg19,809 chainHg19,828 chainMm9,809 chainMm9,828 chainMonDom5,809 chainMonDom5,828 chainNetAilMel1,815 chainNetAilMel1,834 chainNetCanFam2,812 chainNetCanFam2,831 chainNetHg19,812 chainNetHg19,831 chainNetMm9,812 chainNetMm9,831 chainNetMonDom5,812 chainNetMonDom5,831 netAilMel1,812 netAilMel1,831 netCanFam2,809 netCanFam2,828 netHg19,809 netHg19,828 netMm9,809 netMm9,828 netMonDom5,809 netMonDom5,828 highest est,692 intronEst,773 mrna,408 refGene,282 xenoRefGene,248 highest-scoring chainAilMel1,393 chainAilMel1,778 chainCanFam2,390 chainCanFam2,775 chainHg19,390 chainHg19,775 chainMm9,390 chainMm9,775 chainMonDom5,390 chainMonDom5,775 chainNetAilMel1,396 chainNetAilMel1,781 chainNetCanFam2,393 chainNetCanFam2,778 chainNetHg19,393 chainNetHg19,778 chainNetMm9,393 chainNetMm9,778 chainNetMonDom5,393 chainNetMonDom5,778 netAilMel1,393 netAilMel1,778 netCanFam2,390 netCanFam2,775 netHg19,390 netHg19,775 netMm9,390 netMm9,775 netMonDom5,390 netMonDom5,775 highlight cons6way,607 est,333 gc5Base,49 intronEst,414 mrna,279 highlighted cons6way,454 est,303 est,321 intronEst,384 intronEst,402 mrna,249 mrna,267 highly microsat,40 tRNAs,69 highly-conserved cons6way,1769 hillier cons6way,2230 cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainAilMel1,1047 chainCanFam2,1044 chainHg19,1044 chainMm9,1044 chainMonDom5,1044 chainNetAilMel1,1050 chainNetCanFam2,1047 chainNetHg19,1047 chainNetMm9,1047 chainNetMonDom5,1047 cons6way,2220 cons6way,2308 netAilMel1,1047 netCanFam2,1044 netHg19,1044 netMm9,1044 netMonDom5,1044 hiram cons6way,2119 gc5Base,82 his chainAilMel1,945 chainCanFam2,942 chainHg19,942 chainMm9,942 chainMonDom5,942 chainNetAilMel1,948 chainNetCanFam2,945 chainNetHg19,945 chainNetMm9,945 chainNetMonDom5,945 netAilMel1,945 netCanFam2,942 netHg19,942 netMm9,942 netMonDom5,942 histogram cons6way,584 cons6way,641 homology nscanGene,231 honeybee1 augustusGene,217 horizontal nestedRepeats,130 nestedRepeats,150 hou chainAilMel1,924 chainCanFam2,921 chainHg19,921 chainMm9,921 chainMonDom5,921 chainNetAilMel1,927 chainNetCanFam2,924 chainNetHg19,924 chainNetMm9,924 chainNetMonDom5,924 cons6way,2036 cons6way,2222 netAilMel1,924 netCanFam2,921 netHg19,921 netMm9,921 netMonDom5,921 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainAilMel1,879 chainAilMel1,896 chainCanFam2,876 chainCanFam2,893 chainHg19,876 chainHg19,893 chainMm9,876 chainMm9,893 chainMonDom5,876 chainMonDom5,893 chainNetAilMel1,882 chainNetAilMel1,899 chainNetCanFam2,879 chainNetCanFam2,896 chainNetHg19,879 chainNetHg19,896 chainNetMm9,879 chainNetMm9,896 chainNetMonDom5,879 chainNetMonDom5,896 netAilMel1,879 netAilMel1,896 netCanFam2,876 netCanFam2,893 netHg19,876 netHg19,893 netMm9,876 netMm9,893 netMonDom5,876 netMonDom5,893 rmsk,121 however cons6way,438 cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 http cons6way,1827 cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 rmsk,355 hubisz cons6way,2189 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 human augustusGene,205 augustusGene,210 augustusGene,276 blastHg18KG,1 blastHg18KG,3 blastHg18KG,42 blastHg18KG,50 chainAilMel1,1064 chainCanFam2,1061 chainHg19,1 chainHg19,3 chainHg19,65 chainHg19,96 chainHg19,148 chainHg19,266 chainHg19,291 chainHg19,572 chainHg19,620 chainHg19,1061 chainMm9,1061 chainMonDom5,1061 chainNetAilMel1,1067 chainNetCanFam2,1064 chainNetHg19,1 chainNetHg19,4 chainNetHg19,68 chainNetHg19,99 chainNetHg19,151 chainNetHg19,269 chainNetHg19,294 chainNetHg19,575 chainNetHg19,623 chainNetHg19,1064 chainNetHg19Viewchain,2 chainNetHg19Viewnet,2 chainNetMm9,1064 chainNetMonDom5,1064 cons6way,2325 nestedRepeats,404 netAilMel1,1064 netCanFam2,1061 netHg19,1 netHg19,3 netHg19,65 netHg19,96 netHg19,148 netHg19,266 netHg19,291 netHg19,572 netHg19,620 netHg19,1061 netMm9,1061 netMonDom5,1061 nscanGene,102 rmsk,427 human-mouse chainAilMel1,1099 chainCanFam2,1096 chainHg19,1096 chainMm9,1096 chainMonDom5,1096 chainNetAilMel1,1102 chainNetCanFam2,1099 chainNetHg19,1099 chainNetMm9,1099 chainNetMonDom5,1099 cons6way,2439 netAilMel1,1099 netCanFam2,1096 netHg19,1096 netMm9,1096 netMonDom5,1096 humanhomo cons6way,496 hybridizes est,497 intronEst,578 hypothesis cons6way,273 i est,750 est,774 intronEst,834 intronEst,858 mrna,467 mrna,491 nscanGene,222 i.e cons6way,1737 cons6way,1856 intronEst,70 tRNAs,148 id nestedRepeats,10 nestedRepeats,106 identification tRNAs,480 identified blastHg18KG,28 chainAilMel1,940 chainCanFam2,937 chainHg19,937 chainMm9,937 chainMonDom5,937 chainNetAilMel1,943 chainNetCanFam2,940 chainNetHg19,940 chainNetMm9,940 chainNetMonDom5,940 cons6way,60 cons6way,1106 est,696 intronEst,777 netAilMel1,940 netCanFam2,937 netHg19,937 netMm9,937 netMonDom5,937 refGene,286 tRNAs,6 xenoRefGene,252 identify cons6way,369 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 tRNAs,421 identity est,694 est,702 est,714 intronEst,775 intronEst,783 intronEst,795 microsat,71 mrna,410 mrna,418 mrna,430 nestedRepeats,187 nestedRepeats,222 refGene,284 refGene,292 refGene,304 xenoRefGene,250 xenoRefGene,258 xenoRefGene,270 if cons6way,1051 cons6way,1066 cons6way,1101 cons6way,1198 cons6way,1224 est,276 est,288 est,304 est,340 est,357 gap,61 intronEst,357 intronEst,369 intronEst,385 intronEst,421 intronEst,438 mrna,222 mrna,234 mrna,250 mrna,286 mrna,303 nestedRepeats,137 refGene,237 xenoRefGene,203 ignoring cons6way,123 ii215-25 augustusGene,338 image cons6way,2107 images tRNAs,319 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 implementation nscanGene,131 important cons6way,207 improve augustusGene,302 cons6way,1496 nscanGene,162 improved chainAilMel1,1013 chainCanFam2,1010 chainHg19,1010 chainMm9,1010 chainMonDom5,1010 chainNetAilMel1,1016 chainNetCanFam2,1013 chainNetHg19,1013 chainNetMm9,1013 chainNetMonDom5,1013 cons6way,2410 netAilMel1,1013 netCanFam2,1010 netHg19,1010 netMm9,1010 netMonDom5,1010 tRNAs,448 improves nscanGene,255 improving nscanGene,198 in augustusGene,101 blastHg18KG,29 chainAilMel1,32 chainAilMel1,96 chainAilMel1,116 chainAilMel1,148 chainAilMel1,155 chainAilMel1,169 chainAilMel1,188 chainAilMel1,191 chainAilMel1,230 chainAilMel1,251 chainAilMel1,296 chainAilMel1,330 chainAilMel1,360 chainAilMel1,372 chainAilMel1,381 chainAilMel1,399 chainAilMel1,404 chainAilMel1,413 chainAilMel1,425 chainAilMel1,439 chainAilMel1,481 chainAilMel1,498 chainAilMel1,529 chainAilMel1,547 chainAilMel1,561 chainAilMel1,596 chainAilMel1,692 chainAilMel1,780 chainAilMel1,821 chainAilMel1,829 chainAilMel1,845 chainAilMel1,878 chainAilMel1,890 chainAilMel1,1060 chainCanFam2,31 chainCanFam2,94 chainCanFam2,114 chainCanFam2,146 chainCanFam2,153 chainCanFam2,167 chainCanFam2,186 chainCanFam2,189 chainCanFam2,228 chainCanFam2,249 chainCanFam2,294 chainCanFam2,327 chainCanFam2,357 chainCanFam2,369 chainCanFam2,378 chainCanFam2,396 chainCanFam2,401 chainCanFam2,410 chainCanFam2,422 chainCanFam2,436 chainCanFam2,478 chainCanFam2,495 chainCanFam2,526 chainCanFam2,544 chainCanFam2,558 chainCanFam2,593 chainCanFam2,689 chainCanFam2,777 chainCanFam2,818 chainCanFam2,826 chainCanFam2,842 chainCanFam2,875 chainCanFam2,887 chainCanFam2,1057 chainHg19,31 chainHg19,94 chainHg19,114 chainHg19,146 chainHg19,153 chainHg19,167 chainHg19,186 chainHg19,189 chainHg19,228 chainHg19,249 chainHg19,294 chainHg19,327 chainHg19,357 chainHg19,369 chainHg19,378 chainHg19,396 chainHg19,401 chainHg19,410 chainHg19,422 chainHg19,436 chainHg19,478 chainHg19,495 chainHg19,526 chainHg19,544 chainHg19,558 chainHg19,593 chainHg19,689 chainHg19,777 chainHg19,818 chainHg19,826 chainHg19,842 chainHg19,875 chainHg19,887 chainHg19,1057 chainMm9,31 chainMm9,94 chainMm9,114 chainMm9,146 chainMm9,153 chainMm9,167 chainMm9,186 chainMm9,189 chainMm9,228 chainMm9,249 chainMm9,294 chainMm9,327 chainMm9,357 chainMm9,369 chainMm9,378 chainMm9,396 chainMm9,401 chainMm9,410 chainMm9,422 chainMm9,436 chainMm9,478 chainMm9,495 chainMm9,526 chainMm9,544 chainMm9,558 chainMm9,593 chainMm9,689 chainMm9,777 chainMm9,818 chainMm9,826 chainMm9,842 chainMm9,875 chainMm9,887 chainMm9,1057 chainMonDom5,31 chainMonDom5,94 chainMonDom5,114 chainMonDom5,146 chainMonDom5,153 chainMonDom5,167 chainMonDom5,186 chainMonDom5,189 chainMonDom5,228 chainMonDom5,249 chainMonDom5,294 chainMonDom5,327 chainMonDom5,357 chainMonDom5,369 chainMonDom5,378 chainMonDom5,396 chainMonDom5,401 chainMonDom5,410 chainMonDom5,422 chainMonDom5,436 chainMonDom5,478 chainMonDom5,495 chainMonDom5,526 chainMonDom5,544 chainMonDom5,558 chainMonDom5,593 chainMonDom5,689 chainMonDom5,777 chainMonDom5,818 chainMonDom5,826 chainMonDom5,842 chainMonDom5,875 chainMonDom5,887 chainMonDom5,1057 chainNetAilMel1,35 chainNetAilMel1,99 chainNetAilMel1,119 chainNetAilMel1,151 chainNetAilMel1,158 chainNetAilMel1,172 chainNetAilMel1,191 chainNetAilMel1,194 chainNetAilMel1,233 chainNetAilMel1,254 chainNetAilMel1,299 chainNetAilMel1,333 chainNetAilMel1,363 chainNetAilMel1,375 chainNetAilMel1,384 chainNetAilMel1,402 chainNetAilMel1,407 chainNetAilMel1,416 chainNetAilMel1,428 chainNetAilMel1,442 chainNetAilMel1,484 chainNetAilMel1,501 chainNetAilMel1,532 chainNetAilMel1,550 chainNetAilMel1,564 chainNetAilMel1,599 chainNetAilMel1,695 chainNetAilMel1,783 chainNetAilMel1,824 chainNetAilMel1,832 chainNetAilMel1,848 chainNetAilMel1,881 chainNetAilMel1,893 chainNetAilMel1,1063 chainNetCanFam2,34 chainNetCanFam2,97 chainNetCanFam2,117 chainNetCanFam2,149 chainNetCanFam2,156 chainNetCanFam2,170 chainNetCanFam2,189 chainNetCanFam2,192 chainNetCanFam2,231 chainNetCanFam2,252 chainNetCanFam2,297 chainNetCanFam2,330 chainNetCanFam2,360 chainNetCanFam2,372 chainNetCanFam2,381 chainNetCanFam2,399 chainNetCanFam2,404 chainNetCanFam2,413 chainNetCanFam2,425 chainNetCanFam2,439 chainNetCanFam2,481 chainNetCanFam2,498 chainNetCanFam2,529 chainNetCanFam2,547 chainNetCanFam2,561 chainNetCanFam2,596 chainNetCanFam2,692 chainNetCanFam2,780 chainNetCanFam2,821 chainNetCanFam2,829 chainNetCanFam2,845 chainNetCanFam2,878 chainNetCanFam2,890 chainNetCanFam2,1060 chainNetHg19,34 chainNetHg19,97 chainNetHg19,117 chainNetHg19,149 chainNetHg19,156 chainNetHg19,170 chainNetHg19,189 chainNetHg19,192 chainNetHg19,231 chainNetHg19,252 chainNetHg19,297 chainNetHg19,330 chainNetHg19,360 chainNetHg19,372 chainNetHg19,381 chainNetHg19,399 chainNetHg19,404 chainNetHg19,413 chainNetHg19,425 chainNetHg19,439 chainNetHg19,481 chainNetHg19,498 chainNetHg19,529 chainNetHg19,547 chainNetHg19,561 chainNetHg19,596 chainNetHg19,692 chainNetHg19,780 chainNetHg19,821 chainNetHg19,829 chainNetHg19,845 chainNetHg19,878 chainNetHg19,890 chainNetHg19,1060 chainNetMm9,34 chainNetMm9,97 chainNetMm9,117 chainNetMm9,149 chainNetMm9,156 chainNetMm9,170 chainNetMm9,189 chainNetMm9,192 chainNetMm9,231 chainNetMm9,252 chainNetMm9,297 chainNetMm9,330 chainNetMm9,360 chainNetMm9,372 chainNetMm9,381 chainNetMm9,399 chainNetMm9,404 chainNetMm9,413 chainNetMm9,425 chainNetMm9,439 chainNetMm9,481 chainNetMm9,498 chainNetMm9,529 chainNetMm9,547 chainNetMm9,561 chainNetMm9,596 chainNetMm9,692 chainNetMm9,780 chainNetMm9,821 chainNetMm9,829 chainNetMm9,845 chainNetMm9,878 chainNetMm9,890 chainNetMm9,1060 chainNetMonDom5,34 chainNetMonDom5,97 chainNetMonDom5,117 chainNetMonDom5,149 chainNetMonDom5,156 chainNetMonDom5,170 chainNetMonDom5,189 chainNetMonDom5,192 chainNetMonDom5,231 chainNetMonDom5,252 chainNetMonDom5,297 chainNetMonDom5,330 chainNetMonDom5,360 chainNetMonDom5,372 chainNetMonDom5,381 chainNetMonDom5,399 chainNetMonDom5,404 chainNetMonDom5,413 chainNetMonDom5,425 chainNetMonDom5,439 chainNetMonDom5,481 chainNetMonDom5,498 chainNetMonDom5,529 chainNetMonDom5,547 chainNetMonDom5,561 chainNetMonDom5,596 chainNetMonDom5,692 chainNetMonDom5,780 chainNetMonDom5,821 chainNetMonDom5,829 chainNetMonDom5,845 chainNetMonDom5,878 chainNetMonDom5,890 chainNetMonDom5,1060 cons6way,48 cons6way,66 cons6way,74 cons6way,230 cons6way,245 cons6way,259 cons6way,324 cons6way,326 cons6way,331 cons6way,344 cons6way,346 cons6way,377 cons6way,396 cons6way,449 cons6way,455 cons6way,518 cons6way,526 cons6way,570 cons6way,585 cons6way,601 cons6way,647 cons6way,654 cons6way,661 cons6way,668 cons6way,697 cons6way,731 cons6way,759 cons6way,763 cons6way,781 cons6way,795 cons6way,807 cons6way,821 cons6way,836 cons6way,843 cons6way,853 cons6way,859 cons6way,873 cons6way,883 cons6way,895 cons6way,932 cons6way,955 cons6way,987 cons6way,999 cons6way,1037 cons6way,1056 cons6way,1097 cons6way,1124 cons6way,1171 cons6way,1190 cons6way,1282 cons6way,1358 cons6way,1471 cons6way,1490 cons6way,1512 cons6way,1637 cons6way,1714 cons6way,1788 cons6way,1990 cons6way,2003 cons6way,2068 cons6way,2146 cons6way,2173 cons6way,2239 cons6way,2265 cons6way,2271 cons6way,2321 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 ctgPos2,27 est,21 est,34 est,57 est,148 est,169 est,192 est,202 est,220 est,273 est,395 est,528 est,576 est,685 gap,12 gap,58 gap,122 gap,132 gap,147 gap,155 gap,161 gc5Base,5 gc5Base,26 gc5Base,43 gold,74 gold,135 gold,144 intronEst,23 intronEst,46 intronEst,84 intronEst,98 intronEst,141 intronEst,229 intronEst,250 intronEst,273 intronEst,283 intronEst,301 intronEst,354 intronEst,476 intronEst,609 intronEst,657 intronEst,766 intronEst,802 microsat,42 microsat,49 mrna,19 mrna,38 mrna,94 mrna,115 mrna,138 mrna,148 mrna,166 mrna,219 mrna,401 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netAilMel1,32 netAilMel1,96 netAilMel1,116 netAilMel1,148 netAilMel1,155 netAilMel1,169 netAilMel1,188 netAilMel1,191 netAilMel1,230 netAilMel1,251 netAilMel1,296 netAilMel1,330 netAilMel1,360 netAilMel1,372 netAilMel1,381 netAilMel1,399 netAilMel1,404 netAilMel1,413 netAilMel1,425 netAilMel1,439 netAilMel1,481 netAilMel1,498 netAilMel1,529 netAilMel1,547 netAilMel1,561 netAilMel1,596 netAilMel1,692 netAilMel1,780 netAilMel1,821 netAilMel1,829 netAilMel1,845 netAilMel1,878 netAilMel1,890 netAilMel1,1060 netCanFam2,31 netCanFam2,94 netCanFam2,114 netCanFam2,146 netCanFam2,153 netCanFam2,167 netCanFam2,186 netCanFam2,189 netCanFam2,228 netCanFam2,249 netCanFam2,294 netCanFam2,327 netCanFam2,357 netCanFam2,369 netCanFam2,378 netCanFam2,396 netCanFam2,401 netCanFam2,410 netCanFam2,422 netCanFam2,436 netCanFam2,478 netCanFam2,495 netCanFam2,526 netCanFam2,544 netCanFam2,558 netCanFam2,593 netCanFam2,689 netCanFam2,777 netCanFam2,818 netCanFam2,826 netCanFam2,842 netCanFam2,875 netCanFam2,887 netCanFam2,1057 netHg19,31 netHg19,94 netHg19,114 netHg19,146 netHg19,153 netHg19,167 netHg19,186 netHg19,189 netHg19,228 netHg19,249 netHg19,294 netHg19,327 netHg19,357 netHg19,369 netHg19,378 netHg19,396 netHg19,401 netHg19,410 netHg19,422 netHg19,436 netHg19,478 netHg19,495 netHg19,526 netHg19,544 netHg19,558 netHg19,593 netHg19,689 netHg19,777 netHg19,818 netHg19,826 netHg19,842 netHg19,875 netHg19,887 netHg19,1057 netMm9,31 netMm9,94 netMm9,114 netMm9,146 netMm9,153 netMm9,167 netMm9,186 netMm9,189 netMm9,228 netMm9,249 netMm9,294 netMm9,327 netMm9,357 netMm9,369 netMm9,378 netMm9,396 netMm9,401 netMm9,410 netMm9,422 netMm9,436 netMm9,478 netMm9,495 netMm9,526 netMm9,544 netMm9,558 netMm9,593 netMm9,689 netMm9,777 netMm9,818 netMm9,826 netMm9,842 netMm9,875 netMm9,887 netMm9,1057 netMonDom5,31 netMonDom5,94 netMonDom5,114 netMonDom5,146 netMonDom5,153 netMonDom5,167 netMonDom5,186 netMonDom5,189 netMonDom5,228 netMonDom5,249 netMonDom5,294 netMonDom5,327 netMonDom5,357 netMonDom5,369 netMonDom5,378 netMonDom5,396 netMonDom5,401 netMonDom5,410 netMonDom5,422 netMonDom5,436 netMonDom5,478 netMonDom5,495 netMonDom5,526 netMonDom5,544 netMonDom5,558 netMonDom5,593 netMonDom5,689 netMonDom5,777 netMonDom5,818 netMonDom5,826 netMonDom5,842 netMonDom5,875 netMonDom5,887 netMonDom5,1057 nscanGene,31 nscanGene,41 nscanGene,137 nscanGene,150 refGene,275 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 tRNAs,155 tRNAs,158 tRNAs,194 tRNAs,203 tRNAs,222 tRNAs,240 tRNAs,249 tRNAs,378 tRNAs,425 tRNAs,454 tRNAs,486 xenoRefGene,241 include cons6way,696 est,130 est,335 est,359 intronEst,211 intronEst,416 intronEst,440 mrna,76 mrna,281 mrna,305 rmsk,159 rmsk,172 included augustusGene,160 blastHg18KG,113 blastHg18KG,136 cons6way,517 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 includes rmsk,198 including cons6way,1708 est,5 intronEst,120 rmsk,188 indefinitely cons6way,911 indels cons6way,835 microsat,74 independent cons6way,834 indicate chainAilMel1,139 chainAilMel1,245 chainCanFam2,137 chainCanFam2,243 chainHg19,137 chainHg19,243 chainMm9,137 chainMm9,243 chainMonDom5,137 chainMonDom5,243 chainNetAilMel1,142 chainNetAilMel1,248 chainNetCanFam2,140 chainNetCanFam2,246 chainNetHg19,140 chainNetHg19,246 chainNetMm9,140 chainNetMm9,246 chainNetMonDom5,140 chainNetMonDom5,246 cons6way,674 cons6way,1032 est,68 mrna,49 nestedRepeats,153 netAilMel1,139 netAilMel1,245 netCanFam2,137 netCanFam2,243 netHg19,137 netHg19,243 netMm9,137 netMm9,243 netMonDom5,137 netMonDom5,243 tRNAs,137 tRNAs,187 indicated cons6way,1089 indicates cons6way,658 est,76 intronEst,147 intronEst,157 refGene,92 xenoRefGene,58 indicating cons6way,1455 individual chainAilMel1,242 chainAilMel1,496 chainCanFam2,240 chainCanFam2,493 chainHg19,240 chainHg19,493 chainMm9,240 chainMm9,493 chainMonDom5,240 chainMonDom5,493 chainNetAilMel1,245 chainNetAilMel1,499 chainNetCanFam2,243 chainNetCanFam2,496 chainNetHg19,243 chainNetHg19,496 chainNetMm9,243 chainNetMm9,496 chainNetMonDom5,243 chainNetMonDom5,496 cons6way,106 cons6way,121 cons6way,148 cons6way,1822 netAilMel1,242 netAilMel1,496 netCanFam2,240 netCanFam2,493 netHg19,240 netHg19,493 netMm9,240 netMm9,493 netMonDom5,240 netMonDom5,493 informant nscanGene,73 nscanGene,106 information augustusGene,36 blastHg18KG,149 chainAilMel1,459 chainAilMel1,472 chainAilMel1,478 chainAilMel1,846 chainCanFam2,456 chainCanFam2,469 chainCanFam2,475 chainCanFam2,843 chainHg19,456 chainHg19,469 chainHg19,475 chainHg19,843 chainMm9,456 chainMm9,469 chainMm9,475 chainMm9,843 chainMonDom5,456 chainMonDom5,469 chainMonDom5,475 chainMonDom5,843 chainNetAilMel1,462 chainNetAilMel1,475 chainNetAilMel1,481 chainNetAilMel1,849 chainNetCanFam2,459 chainNetCanFam2,472 chainNetCanFam2,478 chainNetCanFam2,846 chainNetHg19,459 chainNetHg19,472 chainNetHg19,478 chainNetHg19,846 chainNetMm9,459 chainNetMm9,472 chainNetMm9,478 chainNetMm9,846 chainNetMonDom5,459 chainNetMonDom5,472 chainNetMonDom5,478 chainNetMonDom5,846 cons6way,613 cons6way,720 cons6way,1404 cons6way,1782 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 est,75 est,410 est,434 gc5Base,55 intronEst,156 intronEst,491 intronEst,515 microsat,97 mrna,347 mrna,373 nestedRepeats,53 nestedRepeats,301 netAilMel1,459 netAilMel1,472 netAilMel1,478 netAilMel1,846 netCanFam2,456 netCanFam2,469 netCanFam2,475 netCanFam2,843 netHg19,456 netHg19,469 netHg19,475 netHg19,843 netMm9,456 netMm9,469 netMm9,475 netMm9,843 netMonDom5,456 netMonDom5,469 netMonDom5,475 netMonDom5,843 nscanGene,48 refGene,65 refGene,209 rmsk,89 rmsk,324 simpleRepeat,58 xenoRefGene,175 initial tRNAs,47 initiate rmsk,316 initio augustusGene,4 augustusGene,17 insect cons6way,2241 inserted chainAilMel1,572 chainAilMel1,902 chainCanFam2,569 chainCanFam2,899 chainHg19,569 chainHg19,899 chainMm9,569 chainMm9,899 chainMonDom5,569 chainMonDom5,899 chainNetAilMel1,575 chainNetAilMel1,905 chainNetCanFam2,572 chainNetCanFam2,902 chainNetHg19,572 chainNetHg19,902 chainNetMm9,572 chainNetMm9,902 chainNetMonDom5,572 chainNetMonDom5,902 netAilMel1,572 netAilMel1,902 netCanFam2,569 netCanFam2,899 netHg19,569 netHg19,899 netMm9,569 netMm9,899 netMonDom5,569 netMonDom5,899 insertion chainAilMel1,154 chainCanFam2,152 chainHg19,152 chainMm9,152 chainMonDom5,152 chainNetAilMel1,157 chainNetCanFam2,155 chainNetHg19,155 chainNetMm9,155 chainNetMonDom5,155 cons6way,790 cons6way,983 est,439 intronEst,520 mrna,378 netAilMel1,154 netCanFam2,152 netHg19,152 netMm9,152 netMonDom5,152 rmsk,223 insertions nestedRepeats,86 nestedRepeats,92 nscanGene,96 inside cons6way,960 inspected tRNAs,228 instead refGene,152 xenoRefGene,118 institute nestedRepeats,55 rmsk,91 insufficient cons6way,1070 integrated tRNAs,27 integrating nscanGene,229 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 international est,735 intronEst,819 mrna,452 internet nestedRepeats,279 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 into chainAilMel1,602 chainAilMel1,614 chainAilMel1,630 chainAilMel1,805 chainCanFam2,599 chainCanFam2,611 chainCanFam2,627 chainCanFam2,802 chainHg19,599 chainHg19,611 chainHg19,627 chainHg19,802 chainMm9,599 chainMm9,611 chainMm9,627 chainMm9,802 chainMonDom5,599 chainMonDom5,611 chainMonDom5,627 chainMonDom5,802 chainNetAilMel1,605 chainNetAilMel1,617 chainNetAilMel1,633 chainNetAilMel1,808 chainNetCanFam2,602 chainNetCanFam2,614 chainNetCanFam2,630 chainNetCanFam2,805 chainNetHg19,602 chainNetHg19,614 chainNetHg19,630 chainNetHg19,805 chainNetMm9,602 chainNetMm9,614 chainNetMm9,630 chainNetMm9,805 chainNetMonDom5,602 chainNetMonDom5,614 chainNetMonDom5,630 chainNetMonDom5,805 cons6way,1339 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 est,252 est,457 est,464 est,609 intronEst,333 intronEst,538 intronEst,545 intronEst,690 mrna,198 netAilMel1,602 netAilMel1,614 netAilMel1,630 netAilMel1,805 netCanFam2,599 netCanFam2,611 netCanFam2,627 netCanFam2,802 netHg19,599 netHg19,611 netHg19,627 netHg19,802 netMm9,599 netMm9,611 netMm9,627 netMm9,802 netMonDom5,599 netMonDom5,611 netMonDom5,627 netMonDom5,802 nscanGene,232 tRNAs,309 intractable gap,41 intron augustusGene,88 augustusGene,330 est,658 intronEst,69 intronEst,739 introns chainAilMel1,57 chainCanFam2,56 chainHg19,56 chainMm9,56 chainMonDom5,56 chainNetAilMel1,60 chainNetCanFam2,59 chainNetHg19,59 chainNetMm9,59 chainNetMonDom5,59 est,675 intronEst,756 netAilMel1,57 netCanFam2,56 netHg19,56 netMm9,56 netMonDom5,56 inv chainAilMel1,534 chainCanFam2,531 chainHg19,531 chainMm9,531 chainMonDom5,531 chainNetAilMel1,537 chainNetCanFam2,534 chainNetHg19,534 chainNetMm9,534 chainNetMonDom5,534 netAilMel1,534 netCanFam2,531 netHg19,531 netMm9,531 netMonDom5,531 inversions chainAilMel1,112 chainAilMel1,176 chainCanFam2,110 chainCanFam2,174 chainHg19,110 chainHg19,174 chainMm9,110 chainMm9,174 chainMonDom5,110 chainMonDom5,174 chainNetAilMel1,115 chainNetAilMel1,179 chainNetCanFam2,113 chainNetCanFam2,177 chainNetHg19,113 chainNetHg19,177 chainNetMm9,113 chainNetMm9,177 chainNetMonDom5,113 chainNetMonDom5,177 netAilMel1,112 netAilMel1,176 netCanFam2,110 netCanFam2,174 netHg19,110 netHg19,174 netMm9,110 netMm9,174 netMonDom5,110 netMonDom5,174 inverted chainAilMel1,864 chainCanFam2,861 chainHg19,861 chainMm9,861 chainMonDom5,861 chainNetAilMel1,867 chainNetCanFam2,864 chainNetHg19,864 chainNetMm9,864 chainNetMonDom5,864 netAilMel1,864 netCanFam2,861 netHg19,861 netMm9,861 netMonDom5,861 involve chainAilMel1,166 chainCanFam2,164 chainHg19,164 chainMm9,164 chainMonDom5,164 chainNetAilMel1,169 chainNetCanFam2,167 chainNetHg19,167 chainNetMm9,167 chainNetMonDom5,167 netAilMel1,166 netCanFam2,164 netHg19,164 netMm9,164 netMonDom5,164 involved tRNAs,193 is blastHg18KG,139 chainAilMel1,279 chainAilMel1,299 chainAilMel1,479 chainCanFam2,277 chainCanFam2,297 chainCanFam2,476 chainHg19,277 chainHg19,297 chainHg19,476 chainMm9,277 chainMm9,297 chainMm9,476 chainMonDom5,277 chainMonDom5,297 chainMonDom5,476 chainNetAilMel1,282 chainNetAilMel1,302 chainNetAilMel1,482 chainNetCanFam2,280 chainNetCanFam2,300 chainNetCanFam2,479 chainNetHg19,280 chainNetHg19,300 chainNetHg19,479 chainNetMm9,280 chainNetMm9,300 chainNetMm9,479 chainNetMonDom5,280 chainNetMonDom5,300 chainNetMonDom5,479 cons6way,78 cons6way,159 cons6way,167 cons6way,180 cons6way,209 cons6way,453 cons6way,666 cons6way,1053 cons6way,1064 cons6way,1069 cons6way,1075 cons6way,1083 cons6way,1095 cons6way,1105 cons6way,1149 cons6way,1205 cons6way,1214 cons6way,1232 cons6way,1685 cons6way,1929 cons6way,2012 cons6way,2136 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 est,292 est,308 est,344 est,361 est,450 est,462 est,471 est,491 est,620 est,663 gap,76 gap,83 gap,91 gc5Base,32 gold,127 gold,133 intronEst,102 intronEst,373 intronEst,389 intronEst,425 intronEst,442 intronEst,531 intronEst,543 intronEst,552 intronEst,572 intronEst,701 intronEst,744 microsat,88 mrna,238 mrna,254 mrna,290 mrna,307 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netAilMel1,279 netAilMel1,299 netAilMel1,479 netCanFam2,277 netCanFam2,297 netCanFam2,476 netHg19,277 netHg19,297 netHg19,476 netMm9,277 netMm9,297 netMm9,476 netMonDom5,277 netMonDom5,297 netMonDom5,476 rmsk,95 rmsk,360 simpleRepeat,28 tRNAs,25 tRNAs,125 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isolated est,451 intronEst,532 isotype tRNAs,248 issue est,765 est,791 intronEst,849 intronEst,875 mrna,482 mrna,508 refGene,388 refGene,422 tRNAs,388 xenoRefGene,353 xenoRefGene,387 it chainAilMel1,91 chainAilMel1,278 chainAilMel1,533 chainAilMel1,545 chainCanFam2,89 chainCanFam2,276 chainCanFam2,530 chainCanFam2,542 chainHg19,89 chainHg19,276 chainHg19,530 chainHg19,542 chainMm9,89 chainMm9,276 chainMm9,530 chainMm9,542 chainMonDom5,89 chainMonDom5,276 chainMonDom5,530 chainMonDom5,542 chainNetAilMel1,94 chainNetAilMel1,281 chainNetAilMel1,536 chainNetAilMel1,548 chainNetCanFam2,92 chainNetCanFam2,279 chainNetCanFam2,533 chainNetCanFam2,545 chainNetHg19,92 chainNetHg19,279 chainNetHg19,533 chainNetHg19,545 chainNetMm9,92 chainNetMm9,279 chainNetMm9,533 chainNetMm9,545 chainNetMonDom5,92 chainNetMonDom5,279 chainNetMonDom5,533 chainNetMonDom5,545 cons6way,101 cons6way,1831 est,90 est,104 est,513 gap,82 intronEst,171 intronEst,185 intronEst,594 netAilMel1,91 netAilMel1,278 netAilMel1,533 netAilMel1,545 netCanFam2,89 netCanFam2,276 netCanFam2,530 netCanFam2,542 netHg19,89 netHg19,276 netHg19,530 netHg19,542 netMm9,89 netMm9,276 netMm9,530 netMm9,542 netMonDom5,89 netMonDom5,276 netMonDom5,530 netMonDom5,542 nscanGene,59 item nestedRepeats,197 refGene,109 xenoRefGene,75 items chainAilMel1,497 chainCanFam2,494 chainHg19,494 chainMm9,494 chainMonDom5,494 chainNetAilMel1,500 chainNetCanFam2,497 chainNetHg19,497 chainNetMm9,497 chainNetMonDom5,497 est,62 est,135 est,145 est,339 intronEst,216 intronEst,226 intronEst,420 mrna,43 mrna,81 mrna,91 mrna,285 nestedRepeats,171 nestedRepeats,180 netAilMel1,497 netCanFam2,494 netHg19,494 netMm9,494 netMonDom5,494 refGene,136 xenoRefGene,102 iterative nscanGene,249 its cons6way,111 cons6way,1936 cons6way,1944 cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 j blastHg18KG,168 cons6way,2161 cons6way,2229 cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 est,754 est,778 intronEst,838 intronEst,862 mrna,471 mrna,495 nestedRepeats,341 nscanGene,165 refGene,367 rmsk,364 tRNAs,429 xenoRefGene,332 jan chainAilMel1,1106 chainCanFam2,1103 chainHg19,1103 chainMm9,1103 chainMonDom5,1103 chainNetAilMel1,1109 chainNetCanFam2,1106 chainNetHg19,1106 chainNetMm9,1106 chainNetMonDom5,1106 cons6way,2181 cons6way,2206 cons6way,2446 est,762 est,787 intronEst,846 intronEst,871 microsat,129 mrna,479 mrna,504 netAilMel1,1106 netCanFam2,1103 netHg19,1103 netMm9,1103 netMonDom5,1103 refGene,385 refGene,418 simpleRepeat,89 tRNAs,385 xenoRefGene,350 xenoRefGene,383 jim blastHg18KG,181 blastHg18KG,194 chainAilMel1,962 chainAilMel1,989 chainAilMel1,1007 chainCanFam2,959 chainCanFam2,986 chainCanFam2,1004 chainHg19,959 chainHg19,986 chainHg19,1004 chainMm9,959 chainMm9,986 chainMm9,1004 chainMonDom5,959 chainMonDom5,986 chainMonDom5,1004 chainNetAilMel1,965 chainNetAilMel1,992 chainNetAilMel1,1010 chainNetCanFam2,962 chainNetCanFam2,989 chainNetCanFam2,1007 chainNetHg19,962 chainNetHg19,989 chainNetHg19,1007 chainNetMm9,962 chainNetMm9,989 chainNetMm9,1007 chainNetMonDom5,962 chainNetMonDom5,989 chainNetMonDom5,1007 cons6way,2054 netAilMel1,962 netAilMel1,989 netAilMel1,1007 netCanFam2,959 netCanFam2,986 netCanFam2,1004 netHg19,959 netHg19,986 netHg19,1004 netMm9,959 netMm9,986 netMm9,1004 netMonDom5,959 netMonDom5,986 netMonDom5,1004 joined chainAilMel1,124 chainCanFam2,122 chainHg19,122 chainMm9,122 chainMonDom5,122 chainNetAilMel1,127 chainNetCanFam2,125 chainNetHg19,125 chainNetMm9,125 chainNetMonDom5,125 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netAilMel1,124 netCanFam2,122 netHg19,122 netMm9,122 netMonDom5,122 jong cons6way,2476 journal nestedRepeats,349 rmsk,372 jr nscanGene,182 nscanGene,185 js cons6way,2219 jul cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 july chainMm9,4 chainMm9,66 chainMm9,300 chainNetMm9,5 chainNetMm9,69 chainNetMm9,303 chainNetMm9Viewchain,3 chainNetMm9Viewnet,3 cons6way,505 netMm9,4 netMm9,66 netMm9,300 jun tRNAs,408 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 just cons6way,104 k augustusGene,268 cons6way,2225 cons6way,2360 est,748 intronEst,832 mrna,465 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karsch-mizrachi est,749 est,773 intronEst,833 intronEst,857 mrna,466 mrna,490 kate cons6way,2117 kd refGene,353 refGene,395 xenoRefGene,318 xenoRefGene,360 kd-tree chainAilMel1,636 chainCanFam2,633 chainHg19,633 chainMm9,633 chainMonDom5,633 chainNetAilMel1,639 chainNetCanFam2,636 chainNetHg19,636 chainNetMm9,636 chainNetMonDom5,636 cons6way,1360 netAilMel1,636 netCanFam2,633 netHg19,633 netMm9,633 netMonDom5,633 kd-trees chainAilMel1,654 chainCanFam2,651 chainHg19,651 chainMm9,651 chainMonDom5,651 chainNetAilMel1,657 chainNetCanFam2,654 chainNetHg19,654 chainNetMm9,654 chainNetMonDom5,654 netAilMel1,654 netCanFam2,651 netHg19,651 netMm9,651 netMonDom5,651 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 kent blastHg18KG,182 blastHg18KG,195 chainAilMel1,963 chainAilMel1,990 chainAilMel1,1008 chainAilMel1,1043 chainAilMel1,1085 chainCanFam2,960 chainCanFam2,987 chainCanFam2,1005 chainCanFam2,1040 chainCanFam2,1082 chainHg19,960 chainHg19,987 chainHg19,1005 chainHg19,1040 chainHg19,1082 chainMm9,960 chainMm9,987 chainMm9,1005 chainMm9,1040 chainMm9,1082 chainMonDom5,960 chainMonDom5,987 chainMonDom5,1005 chainMonDom5,1040 chainMonDom5,1082 chainNetAilMel1,966 chainNetAilMel1,993 chainNetAilMel1,1011 chainNetAilMel1,1046 chainNetAilMel1,1088 chainNetCanFam2,963 chainNetCanFam2,990 chainNetCanFam2,1008 chainNetCanFam2,1043 chainNetCanFam2,1085 chainNetHg19,963 chainNetHg19,990 chainNetHg19,1008 chainNetHg19,1043 chainNetHg19,1085 chainNetMm9,963 chainNetMm9,990 chainNetMm9,1008 chainNetMm9,1043 chainNetMm9,1085 chainNetMonDom5,963 chainNetMonDom5,990 chainNetMonDom5,1008 chainNetMonDom5,1043 chainNetMonDom5,1085 cons6way,2055 cons6way,2304 cons6way,2347 cons6way,2425 est,797 intronEst,881 mrna,514 netAilMel1,963 netAilMel1,990 netAilMel1,1008 netAilMel1,1043 netAilMel1,1085 netCanFam2,960 netCanFam2,987 netCanFam2,1005 netCanFam2,1040 netCanFam2,1082 netHg19,960 netHg19,987 netHg19,1005 netHg19,1040 netHg19,1082 netMm9,960 netMm9,987 netMm9,1005 netMm9,1040 netMm9,1082 netMonDom5,960 netMonDom5,987 netMonDom5,1005 netMonDom5,1040 netMonDom5,1082 refGene,334 xenoRefGene,300 kept est,720 mrna,436 refGene,310 xenoRefGene,276 km cons6way,2356 refGene,371 xenoRefGene,336 known blastHg18KG,26 chainAilMel1,913 chainCanFam2,910 chainHg19,910 chainMm9,910 chainMonDom5,910 chainNetAilMel1,916 chainNetCanFam2,913 chainNetHg19,913 chainNetMm9,913 chainNetMonDom5,913 cons6way,1305 gold,129 netAilMel1,913 netCanFam2,910 netHg19,910 netMm9,910 netMonDom5,910 refGene,15 xenoRefGene,14 korf nscanGene,221 kr cons6way,2192 ks cons6way,2188 l cons6way,2352 cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 lab augustusGene,252 cons6way,2084 nscanGene,27 nscanGene,140 tRNAs,338 label refGene,133 refGene,145 refGene,168 xenoRefGene,99 xenoRefGene,111 xenoRefGene,134 labeled cons6way,1285 nestedRepeats,132 refGene,138 xenoRefGene,104 labeling est,384 intronEst,465 labels nestedRepeats,161 refGene,110 xenoRefGene,76 laboratories nscanGene,149 laboratory cons6way,422 cons6way,2077 lack cons6way,870 landrum refGene,368 xenoRefGene,333 large cons6way,917 cons6way,939 cons6way,1501 largely chainAilMel1,143 chainCanFam2,141 chainHg19,141 chainMm9,141 chainMonDom5,141 chainNetAilMel1,146 chainNetCanFam2,144 chainNetHg19,144 chainNetMm9,144 chainNetMonDom5,144 netAilMel1,143 netCanFam2,141 netHg19,141 netMm9,141 netMonDom5,141 larger cons6way,962 cons6way,1825 intronEst,149 largest chainAilMel1,392 chainCanFam2,389 chainHg19,389 chainMm9,389 chainMonDom5,389 chainNetAilMel1,395 chainNetCanFam2,392 chainNetHg19,392 chainNetMm9,392 chainNetMonDom5,392 netAilMel1,392 netCanFam2,389 netHg19,389 netMm9,389 netMonDom5,389 lastz chainAilMel1,589 chainAilMel1,762 chainAilMel1,911 chainCanFam2,586 chainCanFam2,759 chainCanFam2,908 chainHg19,586 chainHg19,759 chainHg19,908 chainMm9,586 chainMm9,759 chainMm9,908 chainMonDom5,586 chainMonDom5,759 chainMonDom5,908 chainNetAilMel1,592 chainNetAilMel1,765 chainNetAilMel1,914 chainNetCanFam2,589 chainNetCanFam2,762 chainNetCanFam2,911 chainNetHg19,589 chainNetHg19,762 chainNetHg19,911 chainNetMm9,589 chainNetMm9,762 chainNetMm9,911 chainNetMonDom5,589 chainNetMonDom5,762 chainNetMonDom5,911 cons6way,1329 cons6way,2029 cons6way,2387 netAilMel1,589 netAilMel1,762 netAilMel1,911 netCanFam2,586 netCanFam2,759 netCanFam2,908 netHg19,586 netHg19,759 netHg19,908 netMm9,586 netMm9,759 netMm9,908 netMonDom5,586 netMonDom5,759 netMonDom5,908 lavtoaxt chainAilMel1,607 chainCanFam2,604 chainHg19,604 chainMm9,604 chainMonDom5,604 chainNetAilMel1,610 chainNetCanFam2,607 chainNetHg19,607 chainNetMm9,607 chainNetMonDom5,607 netAilMel1,607 netCanFam2,604 netHg19,604 netMm9,604 netMonDom5,604 least blastHg18KG,126 est,711 intronEst,66 intronEst,81 intronEst,792 microsat,29 microsat,78 mrna,427 refGene,301 xenoRefGene,267 length augustusGene,82 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 est,35 est,659 intronEst,47 intronEst,85 intronEst,740 lengths cons6way,1034 cons6way,1538 cons6way,1710 less cons6way,137 refGene,265 xenoRefGene,231 level chainAilMel1,387 chainAilMel1,421 chainAilMel1,426 chainAilMel1,433 chainAilMel1,491 chainAilMel1,518 chainAilMel1,531 chainAilMel1,563 chainCanFam2,384 chainCanFam2,418 chainCanFam2,423 chainCanFam2,430 chainCanFam2,488 chainCanFam2,515 chainCanFam2,528 chainCanFam2,560 chainHg19,384 chainHg19,418 chainHg19,423 chainHg19,430 chainHg19,488 chainHg19,515 chainHg19,528 chainHg19,560 chainMm9,384 chainMm9,418 chainMm9,423 chainMm9,430 chainMm9,488 chainMm9,515 chainMm9,528 chainMm9,560 chainMonDom5,384 chainMonDom5,418 chainMonDom5,423 chainMonDom5,430 chainMonDom5,488 chainMonDom5,515 chainMonDom5,528 chainMonDom5,560 chainNetAilMel1,390 chainNetAilMel1,424 chainNetAilMel1,429 chainNetAilMel1,436 chainNetAilMel1,494 chainNetAilMel1,521 chainNetAilMel1,534 chainNetAilMel1,566 chainNetCanFam2,387 chainNetCanFam2,421 chainNetCanFam2,426 chainNetCanFam2,433 chainNetCanFam2,491 chainNetCanFam2,518 chainNetCanFam2,531 chainNetCanFam2,563 chainNetHg19,387 chainNetHg19,421 chainNetHg19,426 chainNetHg19,433 chainNetHg19,491 chainNetHg19,518 chainNetHg19,531 chainNetHg19,563 chainNetMm9,387 chainNetMm9,421 chainNetMm9,426 chainNetMm9,433 chainNetMm9,491 chainNetMm9,518 chainNetMm9,531 chainNetMm9,563 chainNetMonDom5,387 chainNetMonDom5,421 chainNetMonDom5,426 chainNetMonDom5,433 chainNetMonDom5,491 chainNetMonDom5,518 chainNetMonDom5,531 chainNetMonDom5,563 cons6way,471 cons6way,1008 est,703 intronEst,95 intronEst,784 mrna,419 netAilMel1,387 netAilMel1,421 netAilMel1,426 netAilMel1,433 netAilMel1,491 netAilMel1,518 netAilMel1,531 netAilMel1,563 netCanFam2,384 netCanFam2,418 netCanFam2,423 netCanFam2,430 netCanFam2,488 netCanFam2,515 netCanFam2,528 netCanFam2,560 netHg19,384 netHg19,418 netHg19,423 netHg19,430 netHg19,488 netHg19,515 netHg19,528 netHg19,560 netMm9,384 netMm9,418 netMm9,423 netMm9,430 netMm9,488 netMm9,515 netMm9,528 netMm9,560 netMonDom5,384 netMonDom5,418 netMonDom5,423 netMonDom5,430 netMonDom5,488 netMonDom5,515 netMonDom5,528 netMonDom5,560 refGene,94 refGene,293 rmsk,205 xenoRefGene,60 xenoRefGene,259 levels cons6way,676 cons6way,1730 cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 li nscanGene,187 libraries est,557 intronEst,638 nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 refGene,103 xenoRefGene,69 lighter rmsk,237 like chainAilMel1,48 chainAilMel1,56 chainCanFam2,47 chainCanFam2,55 chainHg19,47 chainHg19,55 chainMm9,47 chainMm9,55 chainMonDom5,47 chainMonDom5,55 chainNetAilMel1,51 chainNetAilMel1,59 chainNetCanFam2,50 chainNetCanFam2,58 chainNetHg19,50 chainNetHg19,58 chainNetMm9,50 chainNetMm9,58 chainNetMonDom5,50 chainNetMonDom5,58 netAilMel1,48 netAilMel1,56 netCanFam2,47 netCanFam2,55 netHg19,47 netHg19,55 netMm9,47 netMm9,55 netMonDom5,47 netMonDom5,55 likelihood cons6way,1870 likely augustusGene,111 cons6way,1915 microsat,17 tRNAs,126 tRNAs,169 line chainAilMel1,469 chainCanFam2,466 chainHg19,466 chainMm9,466 chainMonDom5,466 chainNetAilMel1,472 chainNetCanFam2,469 chainNetHg19,469 chainNetMm9,469 chainNetMonDom5,469 cons6way,778 cons6way,812 cons6way,1031 gap,90 gold,132 nestedRepeats,151 netAilMel1,469 netCanFam2,466 netHg19,466 netMm9,466 netMonDom5,466 rmsk,165 line-up chainAilMel1,536 chainCanFam2,533 chainHg19,533 chainMm9,533 chainMonDom5,533 chainNetAilMel1,539 chainNetCanFam2,536 chainNetHg19,536 chainNetMm9,536 chainNetMonDom5,536 netAilMel1,536 netCanFam2,533 netHg19,533 netMm9,533 netMonDom5,533 line-ups chainAilMel1,521 chainCanFam2,518 chainHg19,518 chainMm9,518 chainMonDom5,518 chainNetAilMel1,524 chainNetCanFam2,521 chainNetHg19,521 chainNetMm9,521 chainNetMonDom5,521 netAilMel1,521 netCanFam2,518 netHg19,518 netMm9,518 netMonDom5,518 lineage cons6way,1855 lineage-specific chainAilMel1,937 chainCanFam2,934 chainHg19,934 chainMm9,934 chainMonDom5,934 chainNetAilMel1,940 chainNetCanFam2,937 chainNetHg19,937 chainNetMm9,937 chainNetMonDom5,937 cons6way,789 cons6way,801 cons6way,982 netAilMel1,937 netCanFam2,934 netHg19,934 netMm9,934 netMonDom5,934 linear chainAilMel1,696 chainCanFam2,693 chainHg19,693 chainMm9,693 chainMonDom5,693 chainNetAilMel1,699 chainNetCanFam2,696 chainNetHg19,696 chainNetMm9,696 chainNetMonDom5,696 netAilMel1,696 netCanFam2,693 netHg19,693 netMm9,693 netMonDom5,693 lineargap chainAilMel1,702 chainCanFam2,699 chainHg19,699 chainMm9,699 chainMonDom5,699 chainNetAilMel1,705 chainNetCanFam2,702 chainNetHg19,702 chainNetMm9,702 chainNetMonDom5,702 netAilMel1,702 netCanFam2,699 netHg19,699 netMm9,699 netMonDom5,699 lines chainAilMel1,131 chainAilMel1,138 chainAilMel1,160 chainAilMel1,449 chainCanFam2,129 chainCanFam2,136 chainCanFam2,158 chainCanFam2,446 chainHg19,129 chainHg19,136 chainHg19,158 chainHg19,446 chainMm9,129 chainMm9,136 chainMm9,158 chainMm9,446 chainMonDom5,129 chainMonDom5,136 chainMonDom5,158 chainMonDom5,446 chainNetAilMel1,134 chainNetAilMel1,141 chainNetAilMel1,163 chainNetAilMel1,452 chainNetCanFam2,132 chainNetCanFam2,139 chainNetCanFam2,161 chainNetCanFam2,449 chainNetHg19,132 chainNetHg19,139 chainNetHg19,161 chainNetHg19,449 chainNetMm9,132 chainNetMm9,139 chainNetMm9,161 chainNetMm9,449 chainNetMonDom5,132 chainNetMonDom5,139 chainNetMonDom5,161 chainNetMonDom5,449 nestedRepeats,131 netAilMel1,131 netAilMel1,138 netAilMel1,160 netAilMel1,449 netCanFam2,129 netCanFam2,136 netCanFam2,158 netCanFam2,446 netHg19,129 netHg19,136 netHg19,158 netHg19,446 netMm9,129 netMm9,136 netMm9,158 netMm9,446 netMonDom5,129 netMonDom5,136 netMonDom5,158 netMonDom5,446 link cons6way,619 gc5Base,63 linked cons6way,1338 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 lipman blastHg18KG,161 est,751 est,775 intronEst,835 intronEst,859 mrna,468 mrna,492 list est,209 intronEst,290 mrna,155 tRNAs,48 listed cons6way,1281 local blastHg18KG,164 chainAilMel1,111 chainAilMel1,182 chainCanFam2,109 chainCanFam2,180 chainHg19,109 chainHg19,180 chainMm9,109 chainMm9,180 chainMonDom5,109 chainMonDom5,180 chainNetAilMel1,114 chainNetAilMel1,185 chainNetCanFam2,112 chainNetCanFam2,183 chainNetHg19,112 chainNetHg19,183 chainNetMm9,112 chainNetMm9,183 chainNetMonDom5,112 chainNetMonDom5,183 nestedRepeats,98 netAilMel1,111 netAilMel1,182 netCanFam2,109 netCanFam2,180 netHg19,109 netHg19,180 netMm9,109 netMm9,180 netMonDom5,109 netMonDom5,180 located simpleRepeat,21 location chainAilMel1,250 chainCanFam2,248 chainHg19,248 chainMm9,248 chainMonDom5,248 chainNetAilMel1,253 chainNetCanFam2,251 chainNetHg19,251 chainNetMm9,251 chainNetMonDom5,251 netAilMel1,250 netCanFam2,248 netHg19,248 netMm9,248 netMonDom5,248 locations gap,3 log cons6way,268 cons6way,1937 cons6way,1945 cons6way,1980 cons6way,1985 log-odds cons6way,1932 cons6way,1960 logic est,287 intronEst,368 mrna,233 long cons6way,1607 cons6way,1772 est,674 intronEst,755 rmsk,161 rmsk,166 longer chainAilMel1,83 chainCanFam2,81 chainHg19,81 chainMm9,81 chainMonDom5,81 chainNetAilMel1,86 chainNetCanFam2,84 chainNetHg19,84 chainNetMm9,84 chainNetMonDom5,84 netAilMel1,83 netCanFam2,81 netHg19,81 netMm9,81 netMonDom5,81 tRNAs,192 longest chainAilMel1,514 chainCanFam2,511 chainHg19,511 chainMm9,511 chainMonDom5,511 chainNetAilMel1,517 chainNetCanFam2,514 chainNetHg19,514 chainNetMm9,514 chainNetMonDom5,514 cons6way,1048 netAilMel1,514 netCanFam2,511 netHg19,511 netMm9,511 netMonDom5,511 look chainAilMel1,47 chainCanFam2,46 chainHg19,46 chainMm9,46 chainMonDom5,46 chainNetAilMel1,50 chainNetCanFam2,49 chainNetHg19,49 chainNetMm9,49 chainNetMonDom5,49 netAilMel1,47 netCanFam2,46 netHg19,46 netMm9,46 netMonDom5,46 loose chainMonDom5,700 chainNetMonDom5,703 netMonDom5,700 loss tRNAs,231 louis nscanGene,33 nscanGene,122 low nestedRepeats,39 rmsk,29 rmsk,181 tRNAs,293 low-coverage cons6way,429 cons6way,451 lowe tRNAs,337 tRNAs,368 tRNAs,440 lower chainAilMel1,490 chainCanFam2,487 chainHg19,487 chainMm9,487 chainMonDom5,487 chainNetAilMel1,493 chainNetCanFam2,490 chainNetHg19,490 chainNetMm9,490 chainNetMonDom5,490 netAilMel1,490 netCanFam2,487 netHg19,487 netMm9,487 netMonDom5,487 lower-level chainAilMel1,853 chainAilMel1,859 chainCanFam2,850 chainCanFam2,856 chainHg19,850 chainHg19,856 chainMm9,850 chainMm9,856 chainMonDom5,850 chainMonDom5,856 chainNetAilMel1,856 chainNetAilMel1,862 chainNetCanFam2,853 chainNetCanFam2,859 chainNetHg19,853 chainNetHg19,859 chainNetMm9,853 chainNetMm9,859 chainNetMonDom5,853 chainNetMonDom5,859 netAilMel1,853 netAilMel1,859 netCanFam2,850 netCanFam2,856 netHg19,850 netHg19,856 netMm9,850 netMm9,856 netMonDom5,850 netMonDom5,856 lower-scoring cons6way,1395 lrt cons6way,1878 ltr rmsk,170 lupus cons6way,486 lw cons6way,2231 m augustusGene,287 augustusGene,289 augustusGene,317 cons6way,2223 cons6way,2346 cons6way,2466 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 est,746 intronEst,830 mrna,463 made gold,60 rmsk,110 madsen cons6way,2463 maf cons6way,533 cons6way,1472 cons6way,2087 mafaddirows cons6way,2090 mafaddqrows cons6way,2095 maglott refGene,398 xenoRefGene,363 maintained tRNAs,334 maiti nscanGene,188 make blastHg18KG,66 est,446 est,512 gold,83 intronEst,527 intronEst,593 refGene,50 rmsk,123 tRNAs,252 makedb rmsk,131 making tRNAs,356 mammal cons6way,17 cons6way,564 cons6way,2485 mammalian cons6way,353 cons6way,2201 nestedRepeats,368 nestedRepeats,382 refGene,378 rmsk,391 rmsk,405 xenoRefGene,343 mammals cons6way,320 cons6way,383 manner cons6way,765 many chainAilMel1,400 chainCanFam2,397 chainHg19,397 chainMm9,397 chainMonDom5,397 chainNetAilMel1,403 chainNetCanFam2,400 chainNetHg19,400 chainNetMm9,400 chainNetMonDom5,400 cons6way,1753 est,144 gap,32 intronEst,110 intronEst,225 mrna,90 netAilMel1,400 netCanFam2,397 netHg19,397 netMm9,397 netMonDom5,397 map chainAilMel1,328 chainCanFam2,325 chainHg19,325 chainMm9,325 chainMonDom5,325 chainNetAilMel1,331 chainNetCanFam2,328 chainNetHg19,328 chainNetMm9,328 chainNetMonDom5,328 netAilMel1,328 netCanFam2,325 netHg19,325 netMm9,325 netMonDom5,325 mapped augustusGene,298 blastHg18KG,5 nestedRepeats,233 mapping ctgPos2,4 gap,4 gc5Base,8 gold,5 mar augustusGene,309 nscanGene,169 tRNAs,461 march cons6way,2153 mario augustusGene,102 augustusGene,283 mark cons6way,2103 est,533 intronEst,614 marked gap,153 tRNAs,287 markers microsat,23 markov augustusGene,325 cons6way,81 cons6way,1718 cons6way,2166 cons6way,2263 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 rmsk,71 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainAilMel1,255 chainAilMel1,515 chainAilMel1,553 chainCanFam2,253 chainCanFam2,512 chainCanFam2,550 chainHg19,253 chainHg19,512 chainHg19,550 chainMm9,253 chainMm9,512 chainMm9,550 chainMonDom5,253 chainMonDom5,512 chainMonDom5,550 chainNetAilMel1,258 chainNetAilMel1,518 chainNetAilMel1,556 chainNetCanFam2,256 chainNetCanFam2,515 chainNetCanFam2,553 chainNetHg19,256 chainNetHg19,515 chainNetHg19,553 chainNetMm9,256 chainNetMm9,515 chainNetMm9,553 chainNetMonDom5,256 chainNetMonDom5,515 chainNetMonDom5,553 est,81 est,297 est,312 est,353 est,371 intronEst,162 intronEst,378 intronEst,393 intronEst,434 intronEst,452 mrna,243 mrna,258 mrna,299 mrna,317 netAilMel1,255 netAilMel1,515 netAilMel1,553 netCanFam2,253 netCanFam2,512 netCanFam2,550 netHg19,253 netHg19,512 netHg19,550 netMm9,253 netMm9,512 netMm9,550 netMonDom5,253 netMonDom5,512 netMonDom5,550 matched blastHg18KG,124 matches est,69 mrna,50 matching chainAilMel1,258 chainCanFam2,256 chainHg19,256 chainMm9,256 chainMonDom5,256 chainNetAilMel1,261 chainNetCanFam2,259 chainNetHg19,259 chainNetMm9,259 chainNetMonDom5,259 est,87 intronEst,168 netAilMel1,258 netCanFam2,256 netHg19,256 netMm9,256 netMonDom5,256 matrix chainAilMel1,666 chainAilMel1,698 chainCanFam2,663 chainCanFam2,695 chainHg19,663 chainHg19,695 chainMm9,663 chainMm9,695 chainMonDom5,663 chainMonDom5,695 chainNetAilMel1,669 chainNetAilMel1,701 chainNetCanFam2,666 chainNetCanFam2,698 chainNetHg19,666 chainNetHg19,698 chainNetMm9,666 chainNetMm9,698 chainNetMonDom5,666 chainNetMonDom5,698 cons6way,1363 cons6way,1555 netAilMel1,666 netAilMel1,698 netCanFam2,663 netCanFam2,695 netHg19,663 netHg19,695 netMm9,663 netMm9,695 netMonDom5,663 netMonDom5,695 tRNAs,494 mature est,503 intronEst,584 max nscanGene,146 maximal nscanGene,204 maximally chainAilMel1,658 chainCanFam2,655 chainHg19,655 chainMm9,655 chainMonDom5,655 chainNetAilMel1,661 chainNetCanFam2,658 chainNetHg19,658 chainNetMm9,658 chainNetMonDom5,658 cons6way,1348 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netAilMel1,658 netCanFam2,655 netHg19,655 netMm9,655 netMonDom5,655 maximum blastHg18KG,91 est,657 intronEst,738 maxtracks augustusGene,139 may chainAilMel1,173 chainAilMel1,429 chainCanFam2,4 chainCanFam2,66 chainCanFam2,171 chainCanFam2,300 chainCanFam2,426 chainHg19,171 chainHg19,426 chainMm9,171 chainMm9,426 chainMonDom5,171 chainMonDom5,426 chainNetAilMel1,176 chainNetAilMel1,432 chainNetCanFam2,5 chainNetCanFam2,69 chainNetCanFam2,174 chainNetCanFam2,303 chainNetCanFam2,429 chainNetCanFam2Viewchain,3 chainNetCanFam2Viewnet,3 chainNetHg19,174 chainNetHg19,429 chainNetMm9,174 chainNetMm9,429 chainNetMonDom5,174 chainNetMonDom5,429 cons6way,358 cons6way,488 cons6way,976 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 est,140 est,259 est,269 est,377 est,428 est,508 est,510 est,522 est,524 est,544 est,668 gap,45 gc5Base,40 intronEst,221 intronEst,340 intronEst,350 intronEst,458 intronEst,509 intronEst,589 intronEst,591 intronEst,603 intronEst,605 intronEst,625 intronEst,749 mrna,86 mrna,205 mrna,215 mrna,323 mrna,367 nestedRepeats,268 nestedRepeats,290 netAilMel1,173 netAilMel1,429 netCanFam2,4 netCanFam2,66 netCanFam2,171 netCanFam2,300 netCanFam2,426 netHg19,171 netHg19,426 netMm9,171 netMm9,426 netMonDom5,171 netMonDom5,426 nscanGene,261 rmsk,297 rmsk,307 simpleRepeat,43 tRNAs,210 tRNAs,212 tRNAs,325 mcgarvey refGene,370 xenoRefGene,335 mdash est,482 est,486 gap,36 gap,44 intronEst,563 intronEst,567 mean tRNAs,117 measure cons6way,213 measurements cons6way,20 cons6way,408 measures cons6way,118 medium chainAilMel1,703 chainCanFam2,700 chainHg19,700 chainMm9,700 chainNetAilMel1,706 chainNetCanFam2,703 chainNetHg19,703 chainNetMm9,703 cons6way,1577 netAilMel1,703 netCanFam2,700 netHg19,700 netMm9,700 refGene,105 xenoRefGene,71 melanoleuca cons6way,492 mellifera augustusGene,216 mementos nestedRepeats,377 rmsk,400 menu cons6way,1123 cons6way,1180 refGene,206 xenoRefGene,172 method cons6way,83 cons6way,1877 methods augustusGene,46 blastHg18KG,35 chainAilMel1,565 chainAilMel1,766 chainCanFam2,562 chainCanFam2,763 chainHg19,562 chainHg19,763 chainMm9,562 chainMm9,763 chainMonDom5,562 chainMonDom5,763 chainNetAilMel1,568 chainNetAilMel1,769 chainNetCanFam2,565 chainNetCanFam2,766 chainNetHg19,565 chainNetHg19,766 chainNetMm9,565 chainNetMm9,766 chainNetMonDom5,565 chainNetMonDom5,766 cons6way,26 cons6way,152 cons6way,1316 cons6way,1526 cons6way,1813 cons6way,2270 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 est,444 intronEst,525 microsat,45 mrna,383 nestedRepeats,244 netAilMel1,565 netAilMel1,766 netCanFam2,562 netCanFam2,763 netHg19,562 netHg19,763 netMm9,562 netMm9,763 netMonDom5,562 netMonDom5,763 nscanGene,36 refGene,249 rmsk,286 simpleRepeat,55 xenoRefGene,215 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 michael nscanGene,112 micro-satellites rmsk,180 microsatellite microsat,1 microsat,22 microsatellites microsat,2 might est,105 est,677 intronEst,186 intronEst,758 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller blastHg18KG,157 chainAilMel1,931 chainAilMel1,968 chainAilMel1,1029 chainAilMel1,1049 chainAilMel1,1097 chainCanFam2,928 chainCanFam2,965 chainCanFam2,1026 chainCanFam2,1046 chainCanFam2,1094 chainHg19,928 chainHg19,965 chainHg19,1026 chainHg19,1046 chainHg19,1094 chainMm9,928 chainMm9,965 chainMm9,1026 chainMm9,1046 chainMm9,1094 chainMonDom5,928 chainMonDom5,965 chainMonDom5,1026 chainMonDom5,1046 chainMonDom5,1094 chainNetAilMel1,934 chainNetAilMel1,971 chainNetAilMel1,1032 chainNetAilMel1,1052 chainNetAilMel1,1100 chainNetCanFam2,931 chainNetCanFam2,968 chainNetCanFam2,1029 chainNetCanFam2,1049 chainNetCanFam2,1097 chainNetHg19,931 chainNetHg19,968 chainNetHg19,1029 chainNetHg19,1049 chainNetHg19,1097 chainNetMm9,931 chainNetMm9,968 chainNetMm9,1029 chainNetMm9,1049 chainNetMm9,1097 chainNetMonDom5,931 chainNetMonDom5,968 chainNetMonDom5,1029 chainNetMonDom5,1049 chainNetMonDom5,1097 cons6way,2041 cons6way,2310 cons6way,2394 cons6way,2437 netAilMel1,931 netAilMel1,968 netAilMel1,1029 netAilMel1,1049 netAilMel1,1097 netCanFam2,928 netCanFam2,965 netCanFam2,1026 netCanFam2,1046 netCanFam2,1094 netHg19,928 netHg19,965 netHg19,1026 netHg19,1046 netHg19,1094 netMm9,928 netMm9,965 netMm9,1026 netMm9,1046 netMm9,1094 netMonDom5,928 netMonDom5,965 netMonDom5,1026 netMonDom5,1046 netMonDom5,1094 minexonintronprob augustusGene,135 minimum chainAilMel1,679 chainCanFam2,676 chainHg19,676 chainMm9,676 chainMonDom5,676 chainNetAilMel1,682 chainNetCanFam2,679 chainNetHg19,679 chainNetMm9,679 chainNetMonDom5,679 netAilMel1,679 netCanFam2,676 netHg19,676 netMm9,676 netMonDom5,676 minmeanexonintronprob augustusGene,137 minmei chainAilMel1,923 chainCanFam2,920 chainHg19,920 chainMm9,920 chainMonDom5,920 chainNetAilMel1,926 chainNetCanFam2,923 chainNetHg19,923 chainNetMm9,923 chainNetMonDom5,923 cons6way,2035 netAilMel1,923 netCanFam2,920 netHg19,920 netMm9,920 netMonDom5,920 minus cons6way,1943 mirna cons6way,203 misalignment cons6way,980 mismatch rmsk,218 missing cons6way,304 cons6way,447 mj cons6way,2190 cons6way,2474 nscanGene,246 refGene,369 xenoRefGene,334 mm9 chainMm9,7 chainMm9,69 chainMm9,303 chainNetMm9,8 chainNetMm9,72 chainNetMm9,306 chainNetMm9Viewchain,6 chainNetMm9Viewnet,6 netMm9,7 netMm9,69 netMm9,303 mo nscanGene,34 mode chainAilMel1,384 chainCanFam2,381 chainHg19,381 chainMm9,381 chainMonDom5,381 chainNetAilMel1,387 chainNetCanFam2,384 chainNetHg19,384 chainNetMm9,384 chainNetMonDom5,384 cons6way,649 cons6way,656 cons6way,664 cons6way,1100 cons6way,1888 cons6way,2011 est,60 est,125 gold,76 intronEst,144 intronEst,206 mrna,41 mrna,71 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netAilMel1,384 netCanFam2,381 netHg19,381 netMm9,381 netMonDom5,381 rmsk,142 model augustusGene,121 augustusGene,326 cons6way,1519 cons6way,1532 cons6way,1559 cons6way,1574 cons6way,1625 cons6way,1719 cons6way,1749 cons6way,1942 cons6way,1950 cons6way,2167 cons6way,2285 model-based cons6way,82 tRNAs,61 modeling nscanGene,40 models augustusGene,49 augustusGene,65 augustusGene,97 augustusGene,145 augustusGene,178 cons6way,2264 nscanGene,79 nscanGene,84 tRNAs,403 moderately cons6way,1773 modes chainAilMel1,240 chainCanFam2,238 chainHg19,238 chainMm9,238 chainMonDom5,238 chainNetAilMel1,243 chainNetCanFam2,241 chainNetHg19,241 chainNetMm9,241 chainNetMonDom5,241 cons6way,575 cons6way,1142 netAilMel1,240 netCanFam2,238 netHg19,238 netMm9,238 netMonDom5,238 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modified rmsk,57 mol blastHg18KG,169 cons6way,2177 cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 tRNAs,430 molecular cons6way,2272 molecule tRNAs,147 mondom5 chainMonDom5,7 chainMonDom5,69 chainMonDom5,303 chainNetMonDom5,8 chainNetMonDom5,72 chainNetMonDom5,306 chainNetMonDom5Viewchain,6 chainNetMonDom5Viewnet,6 netMonDom5,7 netMonDom5,69 netMonDom5,303 monotonic cons6way,1974 more augustusGene,35 blastHg18KG,105 blastHg18KG,148 chainAilMel1,162 chainAilMel1,222 chainCanFam2,160 chainCanFam2,220 chainHg19,160 chainHg19,220 chainMm9,160 chainMm9,220 chainMonDom5,160 chainMonDom5,220 chainNetAilMel1,165 chainNetAilMel1,225 chainNetCanFam2,163 chainNetCanFam2,223 chainNetHg19,163 chainNetHg19,223 chainNetMm9,163 chainNetMm9,223 chainNetMonDom5,163 chainNetMonDom5,223 cons6way,145 cons6way,181 cons6way,818 cons6way,1403 cons6way,1781 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 est,65 est,172 est,279 est,409 est,433 intronEst,253 intronEst,360 intronEst,490 intronEst,514 microsat,96 mrna,46 mrna,118 mrna,225 mrna,346 mrna,372 nestedRepeats,211 nestedRepeats,300 netAilMel1,162 netAilMel1,222 netCanFam2,160 netCanFam2,220 netHg19,160 netHg19,220 netMm9,160 netMm9,220 netMonDom5,160 netMonDom5,220 refGene,64 refGene,208 rmsk,323 simpleRepeat,57 xenoRefGene,174 most augustusGene,93 augustusGene,110 est,481 intronEst,562 nestedRepeats,249 most-conserved cons6way,1902 mostly tRNAs,298 motif tRNAs,38 mount nscanGene,179 mouse chainAilMel1,1062 chainCanFam2,1059 chainHg19,1059 chainMm9,1 chainMm9,3 chainMm9,65 chainMm9,96 chainMm9,148 chainMm9,266 chainMm9,291 chainMm9,572 chainMm9,620 chainMm9,1059 chainMonDom5,1059 chainNetAilMel1,1065 chainNetCanFam2,1062 chainNetHg19,1062 chainNetMm9,1 chainNetMm9,4 chainNetMm9,68 chainNetMm9,99 chainNetMm9,151 chainNetMm9,269 chainNetMm9,294 chainNetMm9,575 chainNetMm9,623 chainNetMm9,1062 chainNetMm9Viewchain,2 chainNetMm9Viewnet,2 chainNetMonDom5,1062 cons6way,1307 cons6way,2323 netAilMel1,1062 netCanFam2,1059 netHg19,1059 netMm9,1 netMm9,3 netMm9,65 netMm9,96 netMm9,148 netMm9,266 netMm9,291 netMm9,572 netMm9,620 netMm9,1059 netMonDom5,1059 mousemus cons6way,503 mr nscanGene,157 nscanGene,228 nscanGene,248 mrna est,7 est,504 est,520 est,603 intronEst,9 intronEst,585 intronEst,601 intronEst,684 mrna,7 mrna,12 mrna,126 mrna,399 mrna,439 mrna,446 mrnas mrna,2 mrna,4 mrna,18 mrna,136 mrna,241 mrna,256 mrna,297 mrna,315 mrna,340 mrna,386 ms cons6way,2479 msa_view cons6way,1591 cons6way,2064 much chainAilMel1,880 chainAilMel1,897 chainCanFam2,877 chainCanFam2,894 chainHg19,877 chainHg19,894 chainMm9,877 chainMm9,894 chainMonDom5,877 chainMonDom5,894 chainNetAilMel1,883 chainNetAilMel1,900 chainNetCanFam2,880 chainNetCanFam2,897 chainNetHg19,880 chainNetHg19,897 chainNetMm9,880 chainNetMm9,897 chainNetMonDom5,880 chainNetMonDom5,897 nestedRepeats,210 netAilMel1,880 netAilMel1,897 netCanFam2,877 netCanFam2,894 netHg19,877 netHg19,894 netMm9,877 netMm9,894 netMonDom5,877 netMonDom5,894 multiple chainAilMel1,194 chainCanFam2,192 chainHg19,192 chainMm9,192 chainMonDom5,192 chainNetAilMel1,197 chainNetCanFam2,195 chainNetHg19,195 chainNetMm9,195 chainNetMonDom5,195 cons6way,13 cons6way,39 cons6way,99 cons6way,387 cons6way,1077 cons6way,1445 cons6way,1448 cons6way,1469 cons6way,1514 cons6way,1580 cons6way,2368 est,257 est,686 intronEst,338 intronEst,767 mrna,203 mrna,402 netAilMel1,194 netCanFam2,192 netHg19,192 netMm9,192 netMonDom5,192 nscanGene,159 refGene,276 xenoRefGene,242 multiple-genome nscanGene,51 multistep tRNAs,492 multiz cons6way,2 cons6way,44 cons6way,392 cons6way,531 cons6way,1435 cons6way,2033 cons6way,2344 cons6wayViewalign,1 cons6wayViewalign,3 cons6wayViewelements,3 cons6wayViewphastcons,4 cons6wayViewphyloP,4 multiz6way,1 multiz6way,3 murphy cons6way,2139 cons6way,2456 musculus cons6way,504 must intronEst,61 intronEst,78 mutation chainAilMel1,183 chainCanFam2,181 chainHg19,181 chainMm9,181 chainMonDom5,181 chainNetAilMel1,186 chainNetCanFam2,184 chainNetHg19,184 chainNetMm9,184 chainNetMonDom5,184 netAilMel1,183 netCanFam2,181 netHg19,181 netMm9,181 netMonDom5,181 myers blastHg18KG,159 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 gap,154 n-scan cons6way,1300 nscanGene,1 nscanGene,2 nscanGene,17 nscanGene,37 nscanGene,83 nscanGene,100 nscanGene,133 name chainAilMel1,366 chainCanFam2,363 chainHg19,363 chainMm9,363 chainMonDom5,363 chainNetAilMel1,369 chainNetCanFam2,366 chainNetHg19,366 chainNetMm9,366 chainNetMonDom5,366 cons6way,1992 est,198 intronEst,279 mrna,144 nestedRepeats,136 netAilMel1,366 netCanFam2,363 netHg19,363 netMm9,363 netMonDom5,363 refGene,141 refGene,151 refGene,156 xenoRefGene,107 xenoRefGene,117 xenoRefGene,122 names chainAilMel1,244 chainCanFam2,242 chainHg19,242 chainMm9,242 chainMonDom5,242 chainNetAilMel1,247 chainNetCanFam2,245 chainNetHg19,245 chainNetMm9,245 chainNetMonDom5,245 ctgPos2,12 netAilMel1,244 netCanFam2,242 netHg19,242 netMm9,242 netMonDom5,242 refGene,163 xenoRefGene,129 native augustusGene,295 natl chainAilMel1,1067 chainCanFam2,1064 chainHg19,1064 chainMm9,1064 chainMonDom5,1064 chainNetAilMel1,1070 chainNetCanFam2,1067 chainNetHg19,1067 chainNetMm9,1067 chainNetMonDom5,1067 cons6way,2328 netAilMel1,1067 netCanFam2,1064 netHg19,1064 netMm9,1064 netMonDom5,1064 natural chainAilMel1,818 chainCanFam2,815 chainHg19,815 chainMm9,815 chainMonDom5,815 chainNetAilMel1,821 chainNetCanFam2,818 chainNetHg19,818 chainNetMm9,818 chainNetMonDom5,818 netAilMel1,818 netCanFam2,815 netHg19,815 netMm9,815 netMonDom5,815 naview tRNAs,348 nbsp chainAilMel1,669 chainCanFam2,666 chainHg19,666 chainMm9,666 chainMonDom5,666 chainNetAilMel1,672 chainNetCanFam2,669 chainNetHg19,669 chainNetMm9,669 chainNetMonDom5,669 netAilMel1,669 netCanFam2,666 netHg19,666 netMm9,666 netMonDom5,666 ncbi blastHg18KG,143 gap,23 gold,22 refGene,24 refGene,330 refGene,400 xenoRefGene,27 xenoRefGene,296 xenoRefGene,365 ncbi37 chainMm9,6 chainMm9,68 chainMm9,302 chainNetMm9,7 chainNetMm9,71 chainNetMm9,305 chainNetMm9Viewchain,5 chainNetMm9Viewnet,5 netMm9,6 netMm9,68 netMm9,302 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 necessary chainAilMel1,802 chainCanFam2,799 chainHg19,799 chainMm9,799 chainMonDom5,799 chainNetAilMel1,805 chainNetCanFam2,802 chainNetHg19,802 chainNetMm9,802 chainNetMonDom5,802 netAilMel1,802 netCanFam2,799 netHg19,799 netMm9,799 netMonDom5,799 negative cons6way,255 cons6way,285 neighbors cons6way,128 nematodes augustusGene,211 nested cons6way,959 net chainAilMel1,35 chainAilMel1,260 chainAilMel1,263 chainAilMel1,379 chainAilMel1,756 chainCanFam2,34 chainCanFam2,258 chainCanFam2,261 chainCanFam2,376 chainCanFam2,753 chainHg19,34 chainHg19,258 chainHg19,261 chainHg19,376 chainHg19,753 chainMm9,34 chainMm9,258 chainMm9,261 chainMm9,376 chainMm9,753 chainMonDom5,34 chainMonDom5,258 chainMonDom5,261 chainMonDom5,376 chainMonDom5,753 chainNetAilMel1,3 chainNetAilMel1,12 chainNetAilMel1,38 chainNetAilMel1,263 chainNetAilMel1,266 chainNetAilMel1,382 chainNetAilMel1,759 chainNetAilMel1Viewchain,10 chainNetAilMel1Viewnet,1 chainNetAilMel1Viewnet,10 chainNetCanFam2,3 chainNetCanFam2,11 chainNetCanFam2,37 chainNetCanFam2,261 chainNetCanFam2,264 chainNetCanFam2,379 chainNetCanFam2,756 chainNetCanFam2Viewchain,9 chainNetCanFam2Viewnet,1 chainNetCanFam2Viewnet,9 chainNetHg19,3 chainNetHg19,11 chainNetHg19,37 chainNetHg19,261 chainNetHg19,264 chainNetHg19,379 chainNetHg19,756 chainNetHg19Viewchain,9 chainNetHg19Viewnet,1 chainNetHg19Viewnet,9 chainNetMm9,3 chainNetMm9,11 chainNetMm9,37 chainNetMm9,261 chainNetMm9,264 chainNetMm9,379 chainNetMm9,756 chainNetMm9Viewchain,9 chainNetMm9Viewnet,1 chainNetMm9Viewnet,9 chainNetMonDom5,3 chainNetMonDom5,11 chainNetMonDom5,37 chainNetMonDom5,261 chainNetMonDom5,264 chainNetMonDom5,379 chainNetMonDom5,756 chainNetMonDom5Viewchain,9 chainNetMonDom5Viewnet,1 chainNetMonDom5Viewnet,9 cons6way,490 cons6way,502 cons6way,507 cons6way,512 cons6way,1401 cons6way,1424 cons6way,2303 netAilMel1,2 netAilMel1,10 netAilMel1,35 netAilMel1,260 netAilMel1,263 netAilMel1,379 netAilMel1,756 netCanFam2,2 netCanFam2,9 netCanFam2,34 netCanFam2,258 netCanFam2,261 netCanFam2,376 netCanFam2,753 netHg19,2 netHg19,9 netHg19,34 netHg19,258 netHg19,261 netHg19,376 netHg19,753 netMm9,2 netMm9,9 netMm9,34 netMm9,258 netMm9,261 netMm9,376 netMm9,753 netMonDom5,2 netMonDom5,9 netMonDom5,34 netMonDom5,258 netMonDom5,261 netMonDom5,376 netMonDom5,753 netclass chainAilMel1,872 chainAilMel1,995 chainCanFam2,869 chainCanFam2,992 chainHg19,869 chainHg19,992 chainMm9,869 chainMm9,992 chainMonDom5,869 chainMonDom5,992 chainNetAilMel1,875 chainNetAilMel1,998 chainNetCanFam2,872 chainNetCanFam2,995 chainNetHg19,872 chainNetHg19,995 chainNetMm9,872 chainNetMm9,995 chainNetMonDom5,872 chainNetMonDom5,995 netAilMel1,872 netAilMel1,995 netCanFam2,869 netCanFam2,992 netHg19,869 netHg19,992 netMm9,869 netMm9,992 netMonDom5,869 netMonDom5,992 nets chainAilMel1,982 chainCanFam2,979 chainHg19,979 chainMm9,979 chainMonDom5,979 chainNetAilMel1,985 chainNetCanFam2,982 chainNetHg19,982 chainNetMm9,982 chainNetMonDom5,982 netAilMel1,982 netCanFam2,979 netHg19,979 netMm9,979 netMonDom5,979 netsyntenic chainAilMel1,840 chainAilMel1,993 chainCanFam2,837 chainCanFam2,990 chainHg19,837 chainHg19,990 chainMm9,837 chainMm9,990 chainMonDom5,837 chainMonDom5,990 chainNetAilMel1,843 chainNetAilMel1,996 chainNetCanFam2,840 chainNetCanFam2,993 chainNetHg19,840 chainNetHg19,993 chainNetMm9,840 chainNetMm9,993 chainNetMonDom5,840 chainNetMonDom5,993 netAilMel1,840 netAilMel1,993 netCanFam2,837 netCanFam2,990 netHg19,837 netHg19,990 netMm9,837 netMm9,990 netMonDom5,837 netMonDom5,990 netting cons6way,1409 cons6way,2050 neutral cons6way,220 cons6way,275 neutrally cons6way,1543 new augustusGene,329 cons6way,2274 tRNAs,482 newer est,555 intronEst,636 nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next blastHg18KG,60 chainAilMel1,345 chainAilMel1,374 chainCanFam2,342 chainCanFam2,371 chainHg19,342 chainHg19,371 chainMm9,342 chainMm9,371 chainMonDom5,342 chainMonDom5,371 chainNetAilMel1,348 chainNetAilMel1,377 chainNetCanFam2,345 chainNetCanFam2,374 chainNetHg19,345 chainNetHg19,374 chainNetMm9,345 chainNetMm9,374 chainNetMonDom5,345 chainNetMonDom5,374 cons6way,1651 netAilMel1,345 netAilMel1,374 netCanFam2,342 netCanFam2,371 netHg19,342 netHg19,371 netMm9,342 netMm9,371 netMonDom5,342 netMonDom5,371 nhgri gap,19 gold,18 gold,69 nielsen cons6way,2266 nig augustusGene,270 no blastHg18KG,95 cons6way,779 cons6way,1143 cons6way,1201 est,92 intronEst,173 microsat,73 tRNAs,191 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-alignable chainAilMel1,50 chainCanFam2,49 chainHg19,49 chainMm9,49 chainMonDom5,49 chainNetAilMel1,53 chainNetCanFam2,52 chainNetHg19,52 chainNetMm9,52 chainNetMonDom5,52 netAilMel1,50 netCanFam2,49 netHg19,49 netMm9,49 netMonDom5,49 non-cat cons6way,1049 xenoRefGene,3 non-coding augustusGene,75 refGene,225 xenoRefGene,191 non-conserved cons6way,1677 cons6way,1949 non-glires cons6way,381 non-mammals cons6way,385 non-mrna est,624 intronEst,705 non-protein-coding refGene,19 refGene,233 xenoRefGene,17 xenoRefGene,199 non-redundant refGene,406 xenoRefGene,371 none cons6way,1287 nonneutral cons6way,2197 nonsyn chainAilMel1,551 chainCanFam2,548 chainHg19,548 chainMm9,548 chainMonDom5,548 chainNetAilMel1,554 chainNetCanFam2,551 chainNetHg19,551 chainNetMm9,551 chainNetMonDom5,551 netAilMel1,551 netCanFam2,548 netHg19,548 netMm9,548 netMonDom5,548 nor tRNAs,265 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not chainAilMel1,807 chainCanFam2,804 chainHg19,804 chainMm9,804 chainMonDom5,804 chainNetAilMel1,810 chainNetCanFam2,807 chainNetHg19,807 chainNetMm9,807 chainNetMonDom5,807 cons6way,103 cons6way,441 cons6way,710 cons6way,1150 cons6way,1290 cons6way,1758 cons6way,1861 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 est,349 est,484 est,511 est,525 gap,120 gap,160 intronEst,430 intronEst,565 intronEst,592 intronEst,606 mrna,295 netAilMel1,807 netCanFam2,804 netHg19,804 netMm9,804 netMonDom5,804 rmsk,113 rmsk,313 tRNAs,136 tRNAs,153 tRNAs,213 tRNAs,263 tRNAs,306 note cons6way,701 est,654 intronEst,735 nestedRepeats,264 tRNAs,283 novo augustusGene,304 nscanGene,56 ns chainAilMel1,887 chainCanFam2,884 chainHg19,884 chainMm9,884 chainMonDom5,884 chainNetAilMel1,890 chainNetCanFam2,887 chainNetHg19,887 chainNetMm9,887 chainNetMonDom5,887 cons6way,467 cons6way,852 gap,131 gap,146 netAilMel1,887 netCanFam2,884 netHg19,884 netMm9,884 netMonDom5,884 nuclear rmsk,155 rmsk,163 nucleic est,758 est,783 intronEst,842 intronEst,867 microsat,125 mrna,475 mrna,500 nscanGene,208 refGene,381 refGene,414 simpleRepeat,85 tRNAs,381 tRNAs,404 tRNAs,457 tRNAs,500 xenoRefGene,346 xenoRefGene,379 nucleotide cons6way,90 cons6way,1722 cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 nucleotides cons6way,190 cons6way,194 cons6way,302 cons6way,1550 cons6way,1823 null cons6way,272 number augustusGene,153 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 intronEst,150 nscanGene,71 rmsk,233 numbers cons6way,1025 o cons6way,2460 cons6way,2464 refGene,363 xenoRefGene,328 oa cons6way,2472 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 obtain cons6way,1778 tRNAs,45 tRNAs,67 obtained augustusGene,126 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 occur simpleRepeat,36 occurrence cons6way,1006 oct augustusGene,334 blastHg18KG,172 chainMonDom5,4 chainMonDom5,66 chainMonDom5,300 chainNetMonDom5,5 chainNetMonDom5,69 chainNetMonDom5,303 chainNetMonDom5Viewchain,3 chainNetMonDom5Viewnet,3 cons6way,510 netMonDom5,4 netMonDom5,66 netMonDom5,300 nscanGene,212 odds cons6way,1986 of augustusGene,72 augustusGene,84 augustusGene,92 augustusGene,94 augustusGene,154 augustusGene,195 augustusGene,236 blastHg18KG,19 blastHg18KG,108 blastHg18KG,120 blastHg18KG,128 blastHg18KG,141 chainAilMel1,18 chainAilMel1,65 chainAilMel1,181 chainAilMel1,201 chainAilMel1,253 chainAilMel1,274 chainAilMel1,357 chainAilMel1,367 chainAilMel1,485 chainAilMel1,505 chainAilMel1,638 chainAilMel1,643 chainAilMel1,661 chainAilMel1,681 chainAilMel1,881 chainAilMel1,956 chainAilMel1,978 chainAilMel1,1002 chainAilMel1,1016 chainCanFam2,17 chainCanFam2,64 chainCanFam2,179 chainCanFam2,199 chainCanFam2,251 chainCanFam2,272 chainCanFam2,354 chainCanFam2,364 chainCanFam2,482 chainCanFam2,502 chainCanFam2,635 chainCanFam2,640 chainCanFam2,658 chainCanFam2,678 chainCanFam2,878 chainCanFam2,953 chainCanFam2,975 chainCanFam2,999 chainCanFam2,1013 chainHg19,17 chainHg19,64 chainHg19,179 chainHg19,199 chainHg19,251 chainHg19,272 chainHg19,354 chainHg19,364 chainHg19,482 chainHg19,502 chainHg19,635 chainHg19,640 chainHg19,658 chainHg19,678 chainHg19,878 chainHg19,953 chainHg19,975 chainHg19,999 chainHg19,1013 chainMm9,17 chainMm9,64 chainMm9,179 chainMm9,199 chainMm9,251 chainMm9,272 chainMm9,354 chainMm9,364 chainMm9,482 chainMm9,502 chainMm9,635 chainMm9,640 chainMm9,658 chainMm9,678 chainMm9,878 chainMm9,953 chainMm9,975 chainMm9,999 chainMm9,1013 chainMonDom5,17 chainMonDom5,64 chainMonDom5,179 chainMonDom5,199 chainMonDom5,251 chainMonDom5,272 chainMonDom5,354 chainMonDom5,364 chainMonDom5,482 chainMonDom5,502 chainMonDom5,635 chainMonDom5,640 chainMonDom5,658 chainMonDom5,678 chainMonDom5,878 chainMonDom5,953 chainMonDom5,975 chainMonDom5,999 chainMonDom5,1013 chainNetAilMel1,21 chainNetAilMel1,68 chainNetAilMel1,184 chainNetAilMel1,204 chainNetAilMel1,256 chainNetAilMel1,277 chainNetAilMel1,360 chainNetAilMel1,370 chainNetAilMel1,488 chainNetAilMel1,508 chainNetAilMel1,641 chainNetAilMel1,646 chainNetAilMel1,664 chainNetAilMel1,684 chainNetAilMel1,884 chainNetAilMel1,959 chainNetAilMel1,981 chainNetAilMel1,1005 chainNetAilMel1,1019 chainNetCanFam2,20 chainNetCanFam2,67 chainNetCanFam2,182 chainNetCanFam2,202 chainNetCanFam2,254 chainNetCanFam2,275 chainNetCanFam2,357 chainNetCanFam2,367 chainNetCanFam2,485 chainNetCanFam2,505 chainNetCanFam2,638 chainNetCanFam2,643 chainNetCanFam2,661 chainNetCanFam2,681 chainNetCanFam2,881 chainNetCanFam2,956 chainNetCanFam2,978 chainNetCanFam2,1002 chainNetCanFam2,1016 chainNetHg19,20 chainNetHg19,67 chainNetHg19,182 chainNetHg19,202 chainNetHg19,254 chainNetHg19,275 chainNetHg19,357 chainNetHg19,367 chainNetHg19,485 chainNetHg19,505 chainNetHg19,638 chainNetHg19,643 chainNetHg19,661 chainNetHg19,681 chainNetHg19,881 chainNetHg19,956 chainNetHg19,978 chainNetHg19,1002 chainNetHg19,1016 chainNetMm9,20 chainNetMm9,67 chainNetMm9,182 chainNetMm9,202 chainNetMm9,254 chainNetMm9,275 chainNetMm9,357 chainNetMm9,367 chainNetMm9,485 chainNetMm9,505 chainNetMm9,638 chainNetMm9,643 chainNetMm9,661 chainNetMm9,681 chainNetMm9,881 chainNetMm9,956 chainNetMm9,978 chainNetMm9,1002 chainNetMm9,1016 chainNetMonDom5,20 chainNetMonDom5,67 chainNetMonDom5,182 chainNetMonDom5,202 chainNetMonDom5,254 chainNetMonDom5,275 chainNetMonDom5,357 chainNetMonDom5,367 chainNetMonDom5,485 chainNetMonDom5,505 chainNetMonDom5,638 chainNetMonDom5,643 chainNetMonDom5,661 chainNetMonDom5,681 chainNetMonDom5,881 chainNetMonDom5,956 chainNetMonDom5,978 chainNetMonDom5,1002 chainNetMonDom5,1016 cons6way,15 cons6way,21 cons6way,126 cons6way,163 cons6way,186 cons6way,193 cons6way,202 cons6way,264 cons6way,274 cons6way,284 cons6way,337 cons6way,461 cons6way,592 cons6way,604 cons6way,610 cons6way,623 cons6way,629 cons6way,677 cons6way,692 cons6way,754 cons6way,865 cons6way,871 cons6way,876 cons6way,891 cons6way,919 cons6way,924 cons6way,949 cons6way,964 cons6way,984 cons6way,1021 cons6way,1035 cons6way,1061 cons6way,1078 cons6way,1133 cons6way,1139 cons6way,1351 cons6way,1354 cons6way,1463 cons6way,1510 cons6way,1549 cons6way,1582 cons6way,1623 cons6way,1631 cons6way,1700 cons6way,1711 cons6way,1720 cons6way,1764 cons6way,1817 cons6way,1846 cons6way,1910 cons6way,1924 cons6way,1976 cons6way,2042 cons6way,2152 cons6way,2175 cons6way,2196 cons6way,2289 cons6way,2413 cons6way,2481 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 ctgPos2,13 ctgPos2,31 est,40 est,70 est,79 est,97 est,99 est,134 est,173 est,199 est,210 est,246 est,315 est,425 est,502 est,518 est,536 est,553 est,615 est,623 est,627 est,706 gap,28 gap,33 gap,40 gap,67 gap,73 gap,107 gap,167 gc5Base,19 gc5Base,46 gc5Base,52 gc5Base,67 gc5Base,76 gold,27 gold,96 gold,121 gold,148 intronEst,31 intronEst,52 intronEst,64 intronEst,96 intronEst,108 intronEst,117 intronEst,151 intronEst,160 intronEst,178 intronEst,180 intronEst,215 intronEst,254 intronEst,280 intronEst,291 intronEst,327 intronEst,396 intronEst,506 intronEst,583 intronEst,599 intronEst,617 intronEst,634 intronEst,696 intronEst,704 intronEst,708 intronEst,787 microsat,27 microsat,55 microsat,64 microsat,81 mrna,51 mrna,80 mrna,119 mrna,145 mrna,156 mrna,192 mrna,261 mrna,364 mrna,422 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netAilMel1,18 netAilMel1,65 netAilMel1,181 netAilMel1,201 netAilMel1,253 netAilMel1,274 netAilMel1,357 netAilMel1,367 netAilMel1,485 netAilMel1,505 netAilMel1,638 netAilMel1,643 netAilMel1,661 netAilMel1,681 netAilMel1,881 netAilMel1,956 netAilMel1,978 netAilMel1,1002 netAilMel1,1016 netCanFam2,17 netCanFam2,64 netCanFam2,179 netCanFam2,199 netCanFam2,251 netCanFam2,272 netCanFam2,354 netCanFam2,364 netCanFam2,482 netCanFam2,502 netCanFam2,635 netCanFam2,640 netCanFam2,658 netCanFam2,678 netCanFam2,878 netCanFam2,953 netCanFam2,975 netCanFam2,999 netCanFam2,1013 netHg19,17 netHg19,64 netHg19,179 netHg19,199 netHg19,251 netHg19,272 netHg19,354 netHg19,364 netHg19,482 netHg19,502 netHg19,635 netHg19,640 netHg19,658 netHg19,678 netHg19,878 netHg19,953 netHg19,975 netHg19,999 netHg19,1013 netMm9,17 netMm9,64 netMm9,179 netMm9,199 netMm9,251 netMm9,272 netMm9,354 netMm9,364 netMm9,482 netMm9,502 netMm9,635 netMm9,640 netMm9,658 netMm9,678 netMm9,878 netMm9,953 netMm9,975 netMm9,999 netMm9,1013 netMonDom5,17 netMonDom5,64 netMonDom5,179 netMonDom5,199 netMonDom5,251 netMonDom5,272 netMonDom5,354 netMonDom5,364 netMonDom5,482 netMonDom5,502 netMonDom5,635 netMonDom5,640 netMonDom5,658 netMonDom5,678 netMonDom5,878 netMonDom5,953 netMonDom5,975 netMonDom5,999 netMonDom5,1013 nscanGene,72 nscanGene,80 nscanGene,132 refGene,95 refGene,114 refGene,128 refGene,153 refGene,264 refGene,296 refGene,409 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 simpleRepeat,40 tRNAs,49 tRNAs,72 tRNAs,82 tRNAs,90 tRNAs,164 tRNAs,232 tRNAs,245 tRNAs,273 tRNAs,320 tRNAs,358 tRNAs,373 tRNAs,450 tRNAs,481 tRNAs,496 xenoRefGene,61 xenoRefGene,80 xenoRefGene,94 xenoRefGene,119 xenoRefGene,230 xenoRefGene,262 xenoRefGene,374 off chainAilMel1,336 chainAilMel1,342 chainCanFam2,333 chainCanFam2,339 chainHg19,333 chainHg19,339 chainMm9,333 chainMm9,339 chainMonDom5,333 chainMonDom5,339 chainNetAilMel1,339 chainNetAilMel1,345 chainNetCanFam2,336 chainNetCanFam2,342 chainNetHg19,336 chainNetHg19,342 chainNetMm9,336 chainNetMm9,342 chainNetMonDom5,336 chainNetMonDom5,342 netAilMel1,336 netAilMel1,342 netCanFam2,333 netCanFam2,339 netHg19,333 netHg19,339 netMm9,333 netMm9,339 netMonDom5,333 netMonDom5,339 refGene,166 xenoRefGene,132 often chainAilMel1,211 chainAilMel1,223 chainCanFam2,209 chainCanFam2,221 chainHg19,209 chainHg19,221 chainMm9,209 chainMm9,221 chainMonDom5,209 chainMonDom5,221 chainNetAilMel1,214 chainNetAilMel1,226 chainNetCanFam2,212 chainNetCanFam2,224 chainNetHg19,212 chainNetHg19,224 chainNetMm9,212 chainNetMm9,224 chainNetMonDom5,212 chainNetMonDom5,224 netAilMel1,211 netAilMel1,223 netCanFam2,209 netCanFam2,221 netHg19,209 netHg19,221 netMm9,209 netMm9,221 netMonDom5,209 netMonDom5,221 oligo-dt est,495 intronEst,576 omitted nestedRepeats,165 on augustusGene,29 augustusGene,37 augustusGene,151 blastHg18KG,150 chainAilMel1,324 chainAilMel1,350 chainAilMel1,453 chainAilMel1,467 chainAilMel1,517 chainAilMel1,522 chainAilMel1,537 chainAilMel1,768 chainCanFam2,321 chainCanFam2,347 chainCanFam2,450 chainCanFam2,464 chainCanFam2,514 chainCanFam2,519 chainCanFam2,534 chainCanFam2,765 chainHg19,321 chainHg19,347 chainHg19,450 chainHg19,464 chainHg19,514 chainHg19,519 chainHg19,534 chainHg19,765 chainMm9,321 chainMm9,347 chainMm9,450 chainMm9,464 chainMm9,514 chainMm9,519 chainMm9,534 chainMm9,765 chainMonDom5,321 chainMonDom5,347 chainMonDom5,450 chainMonDom5,464 chainMonDom5,514 chainMonDom5,519 chainMonDom5,534 chainMonDom5,765 chainNetAilMel1,327 chainNetAilMel1,353 chainNetAilMel1,456 chainNetAilMel1,470 chainNetAilMel1,520 chainNetAilMel1,525 chainNetAilMel1,540 chainNetAilMel1,771 chainNetCanFam2,324 chainNetCanFam2,350 chainNetCanFam2,453 chainNetCanFam2,467 chainNetCanFam2,517 chainNetCanFam2,522 chainNetCanFam2,537 chainNetCanFam2,768 chainNetHg19,324 chainNetHg19,350 chainNetHg19,453 chainNetHg19,467 chainNetHg19,517 chainNetHg19,522 chainNetHg19,537 chainNetHg19,768 chainNetMm9,324 chainNetMm9,350 chainNetMm9,453 chainNetMm9,467 chainNetMm9,517 chainNetMm9,522 chainNetMm9,537 chainNetMm9,768 chainNetMonDom5,324 chainNetMonDom5,350 chainNetMonDom5,453 chainNetMonDom5,467 chainNetMonDom5,517 chainNetMonDom5,522 chainNetMonDom5,537 chainNetMonDom5,768 cons6way,97 cons6way,176 cons6way,685 cons6way,740 cons6way,912 cons6way,921 cons6way,1028 cons6way,1234 cons6way,1274 cons6way,1377 cons6way,1529 cons6way,1618 cons6way,1760 cons6way,1998 cons6way,2138 cons6way,2200 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 est,229 est,278 gap,70 intronEst,310 intronEst,359 mrna,175 mrna,224 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netAilMel1,324 netAilMel1,350 netAilMel1,453 netAilMel1,467 netAilMel1,517 netAilMel1,522 netAilMel1,537 netAilMel1,768 netCanFam2,321 netCanFam2,347 netCanFam2,450 netCanFam2,464 netCanFam2,514 netCanFam2,519 netCanFam2,534 netCanFam2,765 netHg19,321 netHg19,347 netHg19,450 netHg19,464 netHg19,514 netHg19,519 netHg19,534 netHg19,765 netMm9,321 netMm9,347 netMm9,450 netMm9,464 netMm9,514 netMm9,519 netMm9,534 netMm9,765 netMonDom5,321 netMonDom5,347 netMonDom5,450 netMonDom5,464 netMonDom5,514 netMonDom5,519 netMonDom5,534 netMonDom5,765 refGene,66 refGene,377 rmsk,74 tRNAs,269 xenoRefGene,342 once est,263 intronEst,344 mrna,209 one augustusGene,169 chainAilMel1,189 chainAilMel1,358 chainAilMel1,504 chainAilMel1,795 chainAilMel1,891 chainCanFam2,187 chainCanFam2,355 chainCanFam2,501 chainCanFam2,792 chainCanFam2,888 chainHg19,187 chainHg19,355 chainHg19,501 chainHg19,792 chainHg19,888 chainMm9,187 chainMm9,355 chainMm9,501 chainMm9,792 chainMm9,888 chainMonDom5,187 chainMonDom5,355 chainMonDom5,501 chainMonDom5,792 chainMonDom5,888 chainNetAilMel1,192 chainNetAilMel1,361 chainNetAilMel1,507 chainNetAilMel1,798 chainNetAilMel1,894 chainNetCanFam2,190 chainNetCanFam2,358 chainNetCanFam2,504 chainNetCanFam2,795 chainNetCanFam2,891 chainNetHg19,190 chainNetHg19,358 chainNetHg19,504 chainNetHg19,795 chainNetHg19,891 chainNetMm9,190 chainNetMm9,358 chainNetMm9,504 chainNetMm9,795 chainNetMm9,891 chainNetMonDom5,190 chainNetMonDom5,358 chainNetMonDom5,504 chainNetMonDom5,795 chainNetMonDom5,891 cons6way,816 cons6way,952 cons6way,1138 cons6way,1647 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 est,170 est,281 est,314 gold,50 intronEst,67 intronEst,251 intronEst,362 intronEst,395 mrna,116 mrna,227 mrna,260 netAilMel1,189 netAilMel1,358 netAilMel1,504 netAilMel1,795 netAilMel1,891 netCanFam2,187 netCanFam2,355 netCanFam2,501 netCanFam2,792 netCanFam2,888 netHg19,187 netHg19,355 netHg19,501 netHg19,792 netHg19,888 netMm9,187 netMm9,355 netMm9,501 netMm9,792 netMm9,888 netMonDom5,187 netMonDom5,355 netMonDom5,501 netMonDom5,792 netMonDom5,888 only chainAilMel1,354 chainCanFam2,351 chainHg19,351 chainMm9,351 chainMonDom5,351 chainNetAilMel1,357 chainNetCanFam2,354 chainNetHg19,354 chainNetMm9,354 chainNetMonDom5,354 cons6way,328 cons6way,1207 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 est,154 est,294 est,367 est,400 est,697 intronEst,235 intronEst,375 intronEst,448 intronEst,481 intronEst,778 microsat,61 mrna,100 mrna,240 mrna,313 mrna,413 netAilMel1,354 netCanFam2,351 netHg19,351 netMm9,351 netMonDom5,351 refGene,242 refGene,287 xenoRefGene,208 xenoRefGene,253 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 opossum chainMonDom5,1 chainMonDom5,3 chainMonDom5,65 chainMonDom5,96 chainMonDom5,148 chainMonDom5,266 chainMonDom5,291 chainMonDom5,572 chainMonDom5,620 chainNetMonDom5,1 chainNetMonDom5,4 chainNetMonDom5,68 chainNetMonDom5,99 chainNetMonDom5,151 chainNetMonDom5,269 chainNetMonDom5,294 chainNetMonDom5,575 chainNetMonDom5,623 chainNetMonDom5Viewchain,2 chainNetMonDom5Viewnet,2 cons6way,1304 netMonDom5,1 netMonDom5,3 netMonDom5,65 netMonDom5,96 netMonDom5,148 netMonDom5,266 netMonDom5,291 netMonDom5,572 netMonDom5,620 opossummonodelphis cons6way,508 opposite chainAilMel1,549 chainCanFam2,546 chainHg19,546 chainMm9,546 chainMonDom5,546 chainNetAilMel1,552 chainNetCanFam2,549 chainNetHg19,549 chainNetMm9,549 chainNetMonDom5,549 netAilMel1,549 netCanFam2,546 netHg19,546 netMm9,546 netMonDom5,546 option augustusGene,167 augustusGene,187 cons6way,751 cons6way,1842 cons6way,1859 cons6way,1904 est,413 intronEst,494 mrna,350 refGene,146 refGene,198 xenoRefGene,112 xenoRefGene,164 optional refGene,176 xenoRefGene,142 options cons6way,553 cons6way,626 est,442 gc5Base,70 intronEst,523 mrna,381 or blastHg18KG,196 chainAilMel1,31 chainAilMel1,129 chainAilMel1,152 chainAilMel1,184 chainAilMel1,488 chainAilMel1,863 chainAilMel1,892 chainCanFam2,30 chainCanFam2,127 chainCanFam2,150 chainCanFam2,182 chainCanFam2,485 chainCanFam2,860 chainCanFam2,889 chainHg19,30 chainHg19,127 chainHg19,150 chainHg19,182 chainHg19,485 chainHg19,860 chainHg19,889 chainMm9,30 chainMm9,127 chainMm9,150 chainMm9,182 chainMm9,485 chainMm9,860 chainMm9,889 chainMonDom5,30 chainMonDom5,127 chainMonDom5,150 chainMonDom5,182 chainMonDom5,485 chainMonDom5,860 chainMonDom5,889 chainNetAilMel1,34 chainNetAilMel1,132 chainNetAilMel1,155 chainNetAilMel1,187 chainNetAilMel1,491 chainNetAilMel1,866 chainNetAilMel1,895 chainNetCanFam2,33 chainNetCanFam2,130 chainNetCanFam2,153 chainNetCanFam2,185 chainNetCanFam2,488 chainNetCanFam2,863 chainNetCanFam2,892 chainNetHg19,33 chainNetHg19,130 chainNetHg19,153 chainNetHg19,185 chainNetHg19,488 chainNetHg19,863 chainNetHg19,892 chainNetMm9,33 chainNetMm9,130 chainNetMm9,153 chainNetMm9,185 chainNetMm9,488 chainNetMm9,863 chainNetMm9,892 chainNetMonDom5,33 chainNetMonDom5,130 chainNetMonDom5,153 chainNetMonDom5,185 chainNetMonDom5,488 chainNetMonDom5,863 chainNetMonDom5,892 cons6way,191 cons6way,199 cons6way,355 cons6way,382 cons6way,562 cons6way,567 cons6way,650 cons6way,735 cons6way,799 cons6way,817 cons6way,833 cons6way,889 cons6way,1003 cons6way,1819 cons6way,1824 cons6way,1854 cons6way,2002 cons6way,2016 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 est,171 est,306 est,325 est,334 est,399 est,477 est,509 est,523 intronEst,252 intronEst,387 intronEst,406 intronEst,415 intronEst,480 intronEst,558 intronEst,590 intronEst,604 mrna,117 mrna,252 mrna,271 mrna,280 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netAilMel1,31 netAilMel1,129 netAilMel1,152 netAilMel1,184 netAilMel1,488 netAilMel1,863 netAilMel1,892 netCanFam2,30 netCanFam2,127 netCanFam2,150 netCanFam2,182 netCanFam2,485 netCanFam2,860 netCanFam2,889 netHg19,30 netHg19,127 netHg19,150 netHg19,182 netHg19,485 netHg19,860 netHg19,889 netMm9,30 netMm9,127 netMm9,150 netMm9,182 netMm9,485 netMm9,860 netMm9,889 netMonDom5,30 netMonDom5,127 netMonDom5,150 netMonDom5,182 netMonDom5,485 netMonDom5,860 netMonDom5,889 refGene,56 refGene,164 rmsk,251 rmsk,280 tRNAs,183 tRNAs,211 tRNAs,235 tRNAs,300 xenoRefGene,130 order gap,64 gold,118 tRNAs,250 organ est,195 est,201 intronEst,276 intronEst,282 mrna,141 mrna,147 organism chainAilMel1,333 chainAilMel1,363 chainCanFam2,330 chainCanFam2,360 chainHg19,330 chainHg19,360 chainMm9,330 chainMm9,360 chainMonDom5,330 chainMonDom5,360 chainNetAilMel1,336 chainNetAilMel1,366 chainNetCanFam2,333 chainNetCanFam2,363 chainNetHg19,333 chainNetHg19,363 chainNetMm9,333 chainNetMm9,363 chainNetMonDom5,333 chainNetMonDom5,363 netAilMel1,333 netAilMel1,363 netCanFam2,330 netCanFam2,360 netHg19,330 netHg19,360 netMm9,330 netMm9,360 netMonDom5,330 netMonDom5,360 organism-specific blastHg18KG,90 organisms chainAilMel1,908 chainCanFam2,905 chainHg19,905 chainMm9,905 chainMonDom5,905 chainNetAilMel1,911 chainNetCanFam2,908 chainNetHg19,908 chainNetMm9,908 chainNetMonDom5,908 nestedRepeats,295 netAilMel1,908 netCanFam2,905 netHg19,905 netMm9,905 netMonDom5,905 rmsk,302 xenoRefGene,20 organismspeciesrelease cons6way,476 organized cons6way,1357 organizes chainAilMel1,617 chainCanFam2,614 chainHg19,614 chainMm9,614 chainMonDom5,614 chainNetAilMel1,620 chainNetCanFam2,617 chainNetHg19,617 chainNetMm9,617 chainNetMonDom5,617 netAilMel1,617 netCanFam2,614 netHg19,614 netMm9,614 netMonDom5,614 orientation chainAilMel1,550 chainCanFam2,547 chainHg19,547 chainMm9,547 chainMonDom5,547 chainNetAilMel1,553 chainNetCanFam2,550 chainNetHg19,550 chainNetMm9,550 chainNetMonDom5,550 gap,66 gold,120 netAilMel1,550 netCanFam2,547 netHg19,547 netMm9,547 netMonDom5,547 origin nestedRepeats,398 rmsk,421 original cons6way,2078 nestedRepeats,84 orthologs chainAilMel1,286 chainCanFam2,284 chainHg19,284 chainMm9,284 chainMonDom5,284 chainNetAilMel1,289 chainNetCanFam2,287 chainNetHg19,287 chainNetMm9,287 chainNetMonDom5,287 netAilMel1,286 netCanFam2,284 netHg19,284 netMm9,284 netMonDom5,284 ostell est,753 est,777 intronEst,837 intronEst,861 mrna,470 mrna,494 other augustusGene,208 chainAilMel1,25 chainAilMel1,415 chainAilMel1,508 chainCanFam2,24 chainCanFam2,412 chainCanFam2,505 chainHg19,24 chainHg19,412 chainHg19,505 chainMm9,24 chainMm9,412 chainMm9,505 chainMonDom5,24 chainMonDom5,412 chainMonDom5,505 chainNetAilMel1,28 chainNetAilMel1,418 chainNetAilMel1,511 chainNetCanFam2,27 chainNetCanFam2,415 chainNetCanFam2,508 chainNetHg19,27 chainNetHg19,415 chainNetHg19,508 chainNetMm9,27 chainNetMm9,415 chainNetMm9,508 chainNetMonDom5,27 chainNetMonDom5,415 chainNetMonDom5,508 cons6way,46 cons6way,178 cons6way,394 cons6way,1004 cons6way,1085 cons6way,2066 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 gap,150 gold,47 nestedRepeats,376 netAilMel1,25 netAilMel1,415 netAilMel1,508 netCanFam2,24 netCanFam2,412 netCanFam2,505 netHg19,24 netHg19,412 netHg19,505 netMm9,24 netMm9,412 netMm9,505 netMonDom5,24 netMonDom5,412 netMonDom5,505 rmsk,195 rmsk,399 tRNAs,243 xenoRefGene,1 xenoRefGene,21 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 otherwise cons6way,1200 cons6way,1226 cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 est,678 intronEst,759 ottonello tRNAs,478 ouml augustusGene,269 our augustusGene,43 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 refGene,72 rmsk,124 rmsk,129 out chainAilMel1,637 chainCanFam2,634 chainHg19,634 chainMm9,634 chainMonDom5,634 chainNetAilMel1,640 chainNetCanFam2,637 chainNetHg19,637 chainNetMm9,637 chainNetMonDom5,637 cons6way,172 cons6way,465 netAilMel1,637 netCanFam2,634 netHg19,634 netMm9,634 netMonDom5,634 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 outputs rmsk,35 outside est,614 intronEst,695 over blastHg18KG,104 blastHg18KG,118 chainAilMel1,197 chainAilMel1,652 chainCanFam2,195 chainCanFam2,649 chainHg19,195 chainHg19,649 chainMm9,195 chainMm9,649 chainMonDom5,195 chainMonDom5,649 chainNetAilMel1,200 chainNetAilMel1,655 chainNetCanFam2,198 chainNetCanFam2,652 chainNetHg19,198 chainNetHg19,652 chainNetMm9,198 chainNetMm9,652 chainNetMonDom5,198 chainNetMonDom5,652 cons6way,1244 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 netAilMel1,197 netAilMel1,652 netCanFam2,195 netCanFam2,649 netHg19,195 netHg19,649 netMm9,195 netMm9,649 netMonDom5,195 netMonDom5,649 overall cons6way,678 overlap gap,121 overlapping chainAilMel1,114 chainAilMel1,177 chainCanFam2,112 chainCanFam2,175 chainHg19,112 chainHg19,175 chainMm9,112 chainMm9,175 chainMonDom5,112 chainMonDom5,175 chainNetAilMel1,117 chainNetAilMel1,180 chainNetCanFam2,115 chainNetCanFam2,178 chainNetHg19,115 chainNetHg19,178 chainNetMm9,115 chainNetMm9,178 chainNetMonDom5,115 chainNetMonDom5,178 netAilMel1,114 netAilMel1,177 netCanFam2,112 netCanFam2,175 netHg19,112 netHg19,175 netMm9,112 netMm9,175 netMonDom5,112 netMonDom5,175 p nestedRepeats,329 nscanGene,224 rmsk,352 p-values cons6way,269 cons6way,1816 pac chainAilMel1,1036 chainCanFam2,1033 chainHg19,1033 chainMm9,1033 chainMonDom5,1033 chainNetAilMel1,1039 chainNetCanFam2,1036 chainNetHg19,1036 chainNetMm9,1036 chainNetMonDom5,1036 cons6way,2401 netAilMel1,1036 netCanFam2,1033 netHg19,1033 netMm9,1033 netMonDom5,1033 pack chainAilMel1,233 chainCanFam2,231 chainHg19,231 chainMm9,231 chainMonDom5,231 chainNetAilMel1,236 chainNetCanFam2,234 chainNetHg19,234 chainNetMm9,234 chainNetMonDom5,234 cons6way,573 cons6way,648 cons6way,2015 nestedRepeats,116 netAilMel1,233 netCanFam2,231 netHg19,231 netMm9,231 netMonDom5,231 package cons6way,33 cons6way,414 cons6way,1572 page cons6way,689 cons6way,1135 cons6way,2001 cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 est,110 est,422 est,443 intronEst,191 intronEst,503 intronEst,524 mrna,56 mrna,361 mrna,382 refGene,48 refGene,132 refGene,223 rmsk,77 xenoRefGene,98 xenoRefGene,189 pages chainAilMel1,773 chainCanFam2,770 chainHg19,770 chainMm9,770 chainMonDom5,770 chainNetAilMel1,776 chainNetCanFam2,773 chainNetHg19,773 chainNetMm9,773 chainNetMonDom5,773 cons6way,1419 netAilMel1,773 netCanFam2,770 netHg19,770 netMm9,770 netMonDom5,770 pair gap,80 nscanGene,65 paired-end gold,36 pairwise chainAilMel1,1014 chainAilMel1,1032 chainCanFam2,1011 chainCanFam2,1029 chainHg19,1011 chainHg19,1029 chainMm9,1011 chainMm9,1029 chainMonDom5,1011 chainMonDom5,1029 chainNetAilMel1,1017 chainNetAilMel1,1035 chainNetCanFam2,1014 chainNetCanFam2,1032 chainNetHg19,1014 chainNetHg19,1032 chainNetMm9,1014 chainNetMm9,1032 chainNetMonDom5,1014 chainNetMonDom5,1032 cons6way,627 cons6way,699 cons6way,707 cons6way,761 cons6way,1317 cons6way,1334 cons6way,1367 cons6way,1429 cons6way,2397 cons6way,2411 netAilMel1,1014 netAilMel1,1032 netCanFam2,1011 netCanFam2,1029 netHg19,1011 netHg19,1029 netMm9,1011 netMm9,1029 netMonDom5,1011 netMonDom5,1029 pale cons6way,846 panda chainAilMel1,1 chainAilMel1,3 chainAilMel1,66 chainAilMel1,98 chainAilMel1,150 chainAilMel1,268 chainAilMel1,293 chainAilMel1,575 chainAilMel1,623 chainNetAilMel1,1 chainNetAilMel1,4 chainNetAilMel1,69 chainNetAilMel1,101 chainNetAilMel1,153 chainNetAilMel1,271 chainNetAilMel1,296 chainNetAilMel1,578 chainNetAilMel1,626 chainNetAilMel1Viewchain,2 chainNetAilMel1Viewnet,2 netAilMel1,1 netAilMel1,3 netAilMel1,66 netAilMel1,98 netAilMel1,150 netAilMel1,268 netAilMel1,293 netAilMel1,575 netAilMel1,623 pandaailuropoda cons6way,491 paralogous cons6way,995 paralogs chainAilMel1,226 chainCanFam2,224 chainHg19,224 chainMm9,224 chainMonDom5,224 chainNetAilMel1,229 chainNetCanFam2,227 chainNetHg19,227 chainNetMm9,227 chainNetMonDom5,227 netAilMel1,226 netCanFam2,224 netHg19,224 netMm9,224 netMonDom5,224 parameters cons6way,313 cons6way,1365 cons6way,1412 cons6way,1795 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 part blastHg18KG,140 chainAilMel1,273 chainCanFam2,271 chainHg19,271 chainMm9,271 chainMonDom5,271 chainNetAilMel1,276 chainNetCanFam2,274 chainNetHg19,274 chainNetMm9,274 chainNetMonDom5,274 netAilMel1,273 netCanFam2,271 netHg19,271 netMm9,271 netMonDom5,271 particular augustusGene,234 chainAilMel1,199 chainCanFam2,197 chainHg19,197 chainMm9,197 chainMonDom5,197 chainNetAilMel1,202 chainNetCanFam2,200 chainNetHg19,200 chainNetMm9,200 chainNetMonDom5,200 cons6way,189 cons6way,1852 netAilMel1,199 netCanFam2,197 netHg19,197 netMm9,197 netMonDom5,197 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts chainAilMel1,40 chainAilMel1,51 chainCanFam2,39 chainCanFam2,50 chainHg19,39 chainHg19,50 chainMm9,39 chainMm9,50 chainMonDom5,39 chainMonDom5,50 chainNetAilMel1,43 chainNetAilMel1,54 chainNetCanFam2,42 chainNetCanFam2,53 chainNetHg19,42 chainNetHg19,53 chainNetMm9,42 chainNetMm9,53 chainNetMonDom5,42 chainNetMonDom5,53 netAilMel1,40 netAilMel1,51 netCanFam2,39 netCanFam2,50 netHg19,39 netHg19,50 netMm9,39 netMm9,50 netMonDom5,39 netMonDom5,50 patterns augustusGene,56 pavesi tRNAs,41 tRNAs,470 pedersen cons6way,2218 penalty blastHg18KG,97 penn cons6way,51 cons6way,399 cons6way,2044 cons6way,2099 pennsylvania chainAilMel1,919 chainAilMel1,1022 chainCanFam2,916 chainCanFam2,1019 chainHg19,916 chainHg19,1019 chainMm9,916 chainMm9,1019 chainMonDom5,916 chainMonDom5,1019 chainNetAilMel1,922 chainNetAilMel1,1025 chainNetCanFam2,919 chainNetCanFam2,1022 chainNetHg19,919 chainNetHg19,1022 chainNetMm9,919 chainNetMm9,1022 chainNetMonDom5,919 chainNetMonDom5,1022 cons6way,2418 netAilMel1,919 netAilMel1,1022 netCanFam2,916 netCanFam2,1019 netHg19,916 netHg19,1019 netMm9,916 netMm9,1019 netMonDom5,916 netMonDom5,1019 peptides blastHg18KG,21 per tRNAs,94 percent gc5Base,2 gc5Base,4 gc5Base,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5Base,18 perfect microsat,31 performance cons6way,1499 performed cons6way,1206 cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 performing cons6way,1868 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 est,605 intronEst,686 period microsat,65 permitted rmsk,314 persists cons6way,910 perutz nscanGene,148 ph.d chainAilMel1,1019 chainCanFam2,1016 chainHg19,1016 chainMm9,1016 chainMonDom5,1016 chainNetAilMel1,1022 chainNetCanFam2,1019 chainNetHg19,1019 chainNetMm9,1019 chainNetMonDom5,1019 cons6way,2416 netAilMel1,1019 netCanFam2,1016 netHg19,1016 netMm9,1016 netMonDom5,1016 phast cons6way,32 cons6way,1571 cons6way,1829 cons6way,2069 phastcons cons6way,27 cons6way,62 cons6way,69 cons6way,142 cons6way,158 cons6way,278 cons6way,294 cons6way,413 cons6way,542 cons6way,683 cons6way,1521 cons6way,1609 cons6way,1612 cons6way,1662 cons6way,1756 cons6way,1784 cons6way,1794 cons6way,1899 cons6way,2060 cons6way,2157 cons6wayViewphastcons,3 phastCons6way,6 phylo-hmm cons6way,1620 cons6way,1666 cons6way,1702 cons6way,1926 phylo-hmms cons6way,2156 phylofit cons6way,1567 cons6way,2062 phylogenetic cons6way,536 cons6way,1378 cons6way,1517 cons6way,1525 cons6way,2134 cons6way,2261 cons6way,2454 nscanGene,86 phylogenetics cons6way,2489 phylogenies cons6way,2202 phylogeny cons6way,1707 cons6way,1848 cons6way,2149 phylop cons6way,29 cons6way,116 cons6way,133 cons6way,175 cons6way,211 cons6way,232 cons6way,296 cons6way,538 cons6way,1523 cons6way,1805 cons6way,1808 cons6way,2061 cons6way,2159 cons6wayViewphyloP,3 phyloP6way,3 phyloP6way,8 phylopng cons6way,2109 picking cons6way,171 pipeline cons6way,57 cons6way,405 place chainAilMel1,792 chainCanFam2,789 chainHg19,789 chainMm9,789 chainMonDom5,789 chainNetAilMel1,795 chainNetCanFam2,792 chainNetHg19,792 chainNetMm9,792 chainNetMonDom5,792 netAilMel1,792 netCanFam2,789 netHg19,789 netMm9,789 netMonDom5,789 placed chainAilMel1,834 chainCanFam2,831 chainHg19,831 chainMm9,831 chainMonDom5,831 chainNetAilMel1,837 chainNetCanFam2,834 chainNetHg19,834 chainNetMm9,834 chainNetMonDom5,834 cons6way,1387 netAilMel1,834 netCanFam2,831 netHg19,831 netMm9,831 netMonDom5,831 placental cons6way,319 cons6way,563 cons6way,2484 places est,687 intronEst,768 mrna,403 refGene,277 xenoRefGene,243 plasmid est,466 intronEst,547 please refGene,38 tRNAs,278 tRNAs,282 tRNAs,361 plot cons6way,646 plots cons6way,134 cons6way,143 cons6way,233 cons6way,366 plotted cons6way,1681 pmc chainAilMel1,1081 chainAilMel1,1112 chainCanFam2,1078 chainCanFam2,1109 chainHg19,1078 chainHg19,1109 chainMm9,1078 chainMm9,1109 chainMonDom5,1078 chainMonDom5,1109 chainNetAilMel1,1084 chainNetAilMel1,1115 chainNetCanFam2,1081 chainNetCanFam2,1112 chainNetHg19,1081 chainNetHg19,1112 chainNetMm9,1081 chainNetMm9,1112 chainNetMonDom5,1081 chainNetMonDom5,1112 cons6way,2212 cons6way,2255 cons6way,2300 cons6way,2342 cons6way,2385 cons6way,2452 est,769 est,795 est,813 intronEst,853 intronEst,879 intronEst,897 microsat,136 mrna,486 mrna,512 mrna,530 netAilMel1,1081 netAilMel1,1112 netCanFam2,1078 netCanFam2,1109 netHg19,1078 netHg19,1109 netMm9,1078 netMm9,1109 netMonDom5,1078 netMonDom5,1109 nscanGene,219 nscanGene,267 refGene,350 refGene,392 refGene,426 simpleRepeat,96 tRNAs,392 tRNAs,415 tRNAs,468 tRNAs,511 xenoRefGene,315 xenoRefGene,357 xenoRefGene,391 pmc1182216 cons6way,2256 pmc1206396 cons6way,2301 pmc1457044 nscanGene,268 pmc146525 tRNAs,469 pmc148217 microsat,137 simpleRepeat,97 pmc187518 est,814 intronEst,898 mrna,531 refGene,351 xenoRefGene,316 pmc206470 nscanGene,220 pmc208784 chainAilMel1,1082 chainCanFam2,1079 chainHg19,1079 chainMm9,1079 chainMonDom5,1079 chainNetAilMel1,1085 chainNetCanFam2,1082 chainNetHg19,1082 chainNetMm9,1082 chainNetMonDom5,1082 cons6way,2343 netAilMel1,1082 netCanFam2,1079 netHg19,1079 netMm9,1079 netMonDom5,1079 pmc2686519 tRNAs,393 pmc2798823 cons6way,2213 pmc308124 tRNAs,416 pmc308779 est,796 intronEst,880 mrna,513 pmc3531190 est,770 intronEst,854 mrna,487 pmc383317 cons6way,2386 pmc3965018 refGene,393 xenoRefGene,358 pmc430961 chainAilMel1,1113 chainCanFam2,1110 chainHg19,1110 chainMm9,1110 chainMonDom5,1110 chainNetAilMel1,1116 chainNetCanFam2,1113 chainNetHg19,1113 chainNetMm9,1113 chainNetMonDom5,1113 cons6way,2453 netAilMel1,1113 netCanFam2,1110 netHg19,1110 netMm9,1110 netMonDom5,1110 pmc523650 tRNAs,512 pmc539979 refGene,427 xenoRefGene,392 pmid augustusGene,314 augustusGene,339 chainAilMel1,1041 chainAilMel1,1079 chainAilMel1,1110 chainCanFam2,1038 chainCanFam2,1076 chainCanFam2,1107 chainHg19,1038 chainHg19,1076 chainHg19,1107 chainMm9,1038 chainMm9,1076 chainMm9,1107 chainMonDom5,1038 chainMonDom5,1076 chainMonDom5,1107 chainNetAilMel1,1044 chainNetAilMel1,1082 chainNetAilMel1,1113 chainNetCanFam2,1041 chainNetCanFam2,1079 chainNetCanFam2,1110 chainNetHg19,1041 chainNetHg19,1079 chainNetHg19,1110 chainNetMm9,1041 chainNetMm9,1079 chainNetMm9,1110 chainNetMonDom5,1041 chainNetMonDom5,1079 chainNetMonDom5,1110 cons6way,2185 cons6way,2210 cons6way,2253 cons6way,2298 cons6way,2340 cons6way,2383 cons6way,2406 cons6way,2450 cons6way,2497 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 est,767 est,793 est,811 intronEst,851 intronEst,877 intronEst,895 microsat,134 mrna,484 mrna,510 mrna,528 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netAilMel1,1041 netAilMel1,1079 netAilMel1,1110 netCanFam2,1038 netCanFam2,1076 netCanFam2,1107 netHg19,1038 netHg19,1076 netHg19,1107 netMm9,1038 netMm9,1076 netMm9,1107 netMonDom5,1038 netMonDom5,1076 netMonDom5,1107 nscanGene,173 nscanGene,217 nscanGene,242 nscanGene,265 refGene,348 refGene,390 refGene,424 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 tRNAs,390 tRNAs,413 tRNAs,438 tRNAs,466 tRNAs,509 xenoRefGene,313 xenoRefGene,355 xenoRefGene,389 point est,548 intronEst,629 rmsk,269 pollard cons6way,2187 poly-a augustusGene,62 est,500 est,574 intronEst,581 intronEst,655 polymorphic microsat,41 simpleRepeat,46 population microsat,44 portions cons6way,875 position chainAilMel1,708 chainCanFam2,705 chainHg19,705 chainMm9,705 chainMonDom5,705 chainNetAilMel1,711 chainNetCanFam2,708 chainNetHg19,708 chainNetMm9,708 chainNetMonDom5,708 cons6way,727 netAilMel1,708 netCanFam2,705 netHg19,705 netMm9,705 netMonDom5,705 positions cons6way,198 cons6way,201 cons6way,1044 positive cons6way,241 tRNAs,88 possible chainAilMel1,409 chainCanFam2,406 chainHg19,406 chainMm9,406 chainMonDom5,406 chainNetAilMel1,412 chainNetCanFam2,409 chainNetHg19,409 chainNetMm9,409 chainNetMonDom5,409 netAilMel1,409 netCanFam2,406 netHg19,406 netMm9,406 netMonDom5,406 possibly chainAilMel1,285 chainCanFam2,283 chainHg19,283 chainMm9,283 chainMonDom5,283 chainNetAilMel1,288 chainNetCanFam2,286 chainNetHg19,286 chainNetMm9,286 chainNetMonDom5,286 cons6way,785 cons6way,825 netAilMel1,285 netCanFam2,283 netHg19,283 netMm9,283 netMonDom5,283 simpleRepeat,18 post-processed cons6way,1451 posterior cons6way,1687 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 tRNAs,422 pp cons6way,2278 tRNAs,367 pre-filters tRNAs,43 precision cons6way,1578 predicted blastHg18KG,24 blastHg18KG,38 cons6way,235 cons6way,249 cons6way,1896 cons6way,1906 cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 refGene,102 tRNAs,19 tRNAs,322 xenoRefGene,68 prediction augustusGene,321 nscanGene,20 nscanGene,164 nscanGene,235 nscanGene,251 refGene,87 xenoRefGene,53 predictions augustusGene,6 augustusGene,11 augustusGene,18 augustusGene,26 augustusGene,191 blastHg18KG,12 nscanGene,4 nscanGene,8 nscanGene,14 nscanGene,58 refGene,8 refGene,189 refGene,218 tRNAs,12 tRNAs,78 tRNAs,295 xenoRefGene,9 xenoRefGene,155 xenoRefGene,184 prepared gc5Base,80 present cons6way,1189 cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 presentation gc5Base,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 pressures cons6way,376 previous cons6way,75 previously chainAilMel1,912 chainCanFam2,909 chainHg19,909 chainMm9,909 chainMonDom5,909 chainNetAilMel1,915 chainNetCanFam2,912 chainNetHg19,912 chainNetMm9,912 chainNetMonDom5,912 netAilMel1,912 netCanFam2,909 netHg19,909 netMm9,909 netMonDom5,909 primary tRNAs,73 tRNAs,234 primed est,492 intronEst,573 primer est,479 intronEst,560 priming est,575 intronEst,656 principal gap,105 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 probabilistic cons6way,1624 probabilities cons6way,283 probability cons6way,87 cons6way,1688 cons6way,1938 cons6way,1946 probably tRNAs,151 tRNAs,189 proc chainAilMel1,1066 chainCanFam2,1063 chainHg19,1063 chainMm9,1063 chainMonDom5,1063 chainNetAilMel1,1069 chainNetCanFam2,1066 chainNetHg19,1066 chainNetMm9,1066 chainNetMonDom5,1066 cons6way,2327 netAilMel1,1066 netCanFam2,1063 netHg19,1063 netMm9,1063 netMonDom5,1063 process chainAilMel1,816 chainCanFam2,813 chainHg19,813 chainMm9,813 chainMonDom5,813 chainNetAilMel1,819 chainNetCanFam2,816 chainNetHg19,816 chainNetMm9,816 chainNetMonDom5,816 cons6way,1410 cons6way,1630 cons6way,1644 cons6way,1724 cons6way,2284 gap,51 netAilMel1,816 netCanFam2,813 netHg19,813 netMm9,813 netMonDom5,813 processed chainAilMel1,214 chainCanFam2,212 chainHg19,212 chainMm9,212 chainMonDom5,212 chainNetAilMel1,217 chainNetCanFam2,215 chainNetHg19,215 chainNetMm9,215 chainNetMonDom5,215 netAilMel1,214 netCanFam2,212 netHg19,212 netMm9,212 netMonDom5,212 produce blastHg18KG,188 cons6way,1398 cons6way,1444 cons6way,1835 produced cons6way,1887 est,725 intronEst,809 mrna,442 refGene,315 xenoRefGene,281 program augustusGene,21 augustusGene,257 blastHg18KG,55 blastHg18KG,79 chainAilMel1,608 chainAilMel1,648 chainAilMel1,786 chainAilMel1,839 chainAilMel1,871 chainAilMel1,947 chainAilMel1,950 chainCanFam2,605 chainCanFam2,645 chainCanFam2,783 chainCanFam2,836 chainCanFam2,868 chainCanFam2,944 chainCanFam2,947 chainHg19,605 chainHg19,645 chainHg19,783 chainHg19,836 chainHg19,868 chainHg19,944 chainHg19,947 chainMm9,605 chainMm9,645 chainMm9,783 chainMm9,836 chainMm9,868 chainMm9,944 chainMm9,947 chainMonDom5,605 chainMonDom5,645 chainMonDom5,783 chainMonDom5,836 chainMonDom5,868 chainMonDom5,944 chainMonDom5,947 chainNetAilMel1,611 chainNetAilMel1,651 chainNetAilMel1,789 chainNetAilMel1,842 chainNetAilMel1,874 chainNetAilMel1,950 chainNetAilMel1,953 chainNetCanFam2,608 chainNetCanFam2,648 chainNetCanFam2,786 chainNetCanFam2,839 chainNetCanFam2,871 chainNetCanFam2,947 chainNetCanFam2,950 chainNetHg19,608 chainNetHg19,648 chainNetHg19,786 chainNetHg19,839 chainNetHg19,871 chainNetHg19,947 chainNetHg19,950 chainNetMm9,608 chainNetMm9,648 chainNetMm9,786 chainNetMm9,839 chainNetMm9,871 chainNetMm9,947 chainNetMm9,950 chainNetMonDom5,608 chainNetMonDom5,648 chainNetMonDom5,786 chainNetMonDom5,839 chainNetMonDom5,871 chainNetMonDom5,947 chainNetMonDom5,950 cons6way,1568 cons6way,1613 cons6way,1809 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 microsat,100 microsat,120 mrna,395 nestedRepeats,30 netAilMel1,608 netAilMel1,648 netAilMel1,786 netAilMel1,839 netAilMel1,871 netAilMel1,947 netAilMel1,950 netCanFam2,605 netCanFam2,645 netCanFam2,783 netCanFam2,836 netCanFam2,868 netCanFam2,944 netCanFam2,947 netHg19,605 netHg19,645 netHg19,783 netHg19,836 netHg19,868 netHg19,944 netHg19,947 netMm9,605 netMm9,645 netMm9,783 netMm9,836 netMm9,868 netMm9,944 netMm9,947 netMonDom5,605 netMonDom5,645 netMonDom5,783 netMonDom5,836 netMonDom5,868 netMonDom5,944 netMonDom5,947 rmsk,20 rmsk,34 simpleRepeat,62 simpleRepeat,80 tRNAs,28 tRNAs,53 tRNAs,63 tRNAs,446 programming cons6way,1344 programs chainAilMel1,996 chainCanFam2,993 chainHg19,993 chainMm9,993 chainMonDom5,993 chainNetAilMel1,999 chainNetCanFam2,996 chainNetHg19,996 chainNetMm9,996 chainNetMonDom5,996 cons6way,1755 cons6way,2026 cons6way,2067 netAilMel1,996 netCanFam2,993 netHg19,993 netMm9,993 netMonDom5,993 progressively cons6way,1432 project gap,24 gold,23 gold,67 refGene,332 xenoRefGene,298 projects est,569 est,588 est,618 intronEst,650 intronEst,669 intronEst,699 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 protein blastHg18KG,111 blastHg18KG,130 cons6way,1217 cons6way,1242 protein-coding augustusGene,73 refGene,17 refGene,231 xenoRefGene,15 xenoRefGene,197 proteins blastHg18KG,2 blastHg18KG,4 blastHg18KG,39 refGene,413 xenoRefGene,378 provided nscanGene,22 tRNAs,318 provides cons6way,433 providing augustusGene,254 nestedRepeats,312 nscanGene,124 rmsk,335 provisional refGene,104 xenoRefGene,70 pruitt refGene,352 refGene,394 xenoRefGene,317 xenoRefGene,359 pseudo tRNAs,290 pseudogene nscanGene,253 pseudogenes chainAilMel1,215 chainAilMel1,229 chainCanFam2,213 chainCanFam2,227 chainHg19,213 chainHg19,227 chainMm9,213 chainMm9,227 chainMonDom5,213 chainMonDom5,227 chainNetAilMel1,218 chainNetAilMel1,232 chainNetCanFam2,216 chainNetCanFam2,230 chainNetHg19,216 chainNetHg19,230 chainNetMm9,216 chainNetMm9,230 chainNetMonDom5,216 chainNetMonDom5,230 netAilMel1,215 netAilMel1,229 netCanFam2,213 netCanFam2,227 netHg19,213 netHg19,227 netMm9,213 netMm9,227 netMonDom5,213 netMonDom5,227 tRNAs,299 psl est,54 intronEst,138 mrna,35 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 est,736 intronEst,820 mrna,453 publicly nestedRepeats,275 pull-down cons6way,1122 cons6way,1179 refGene,205 xenoRefGene,171 purpose simpleRepeat,32 putative blastHg18KG,82 qgap chainAilMel1,720 chainCanFam2,717 chainHg19,717 chainMm9,717 chainMonDom5,717 chainNetAilMel1,723 chainNetCanFam2,720 chainNetHg19,720 chainNetMm9,720 chainNetMonDom5,720 netAilMel1,720 netCanFam2,717 netHg19,717 netMm9,717 netMonDom5,717 quality cons6way,660 cons6way,1462 est,72 mrna,53 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 query blastHg18KG,110 blastHg18KG,122 rmsk,47 rmsk,61 question cons6way,1715 quickly mrna,338 refGene,184 xenoRefGene,150 quite simpleRepeat,45 quot chainAilMel1,27 chainAilMel1,29 chainAilMel1,34 chainAilMel1,36 chainAilMel1,103 chainAilMel1,105 chainAilMel1,232 chainAilMel1,234 chainAilMel1,236 chainAilMel1,238 chainAilMel1,341 chainAilMel1,343 chainAilMel1,682 chainAilMel1,684 chainCanFam2,26 chainCanFam2,28 chainCanFam2,33 chainCanFam2,35 chainCanFam2,101 chainCanFam2,103 chainCanFam2,230 chainCanFam2,232 chainCanFam2,234 chainCanFam2,236 chainCanFam2,338 chainCanFam2,340 chainCanFam2,679 chainCanFam2,681 chainHg19,26 chainHg19,28 chainHg19,33 chainHg19,35 chainHg19,101 chainHg19,103 chainHg19,230 chainHg19,232 chainHg19,234 chainHg19,236 chainHg19,338 chainHg19,340 chainHg19,679 chainHg19,681 chainMm9,26 chainMm9,28 chainMm9,33 chainMm9,35 chainMm9,101 chainMm9,103 chainMm9,230 chainMm9,232 chainMm9,234 chainMm9,236 chainMm9,338 chainMm9,340 chainMm9,679 chainMm9,681 chainMonDom5,26 chainMonDom5,28 chainMonDom5,33 chainMonDom5,35 chainMonDom5,101 chainMonDom5,103 chainMonDom5,230 chainMonDom5,232 chainMonDom5,234 chainMonDom5,236 chainMonDom5,338 chainMonDom5,340 chainMonDom5,679 chainMonDom5,681 chainNetAilMel1,30 chainNetAilMel1,32 chainNetAilMel1,37 chainNetAilMel1,39 chainNetAilMel1,106 chainNetAilMel1,108 chainNetAilMel1,235 chainNetAilMel1,237 chainNetAilMel1,239 chainNetAilMel1,241 chainNetAilMel1,344 chainNetAilMel1,346 chainNetAilMel1,685 chainNetAilMel1,687 chainNetCanFam2,29 chainNetCanFam2,31 chainNetCanFam2,36 chainNetCanFam2,38 chainNetCanFam2,104 chainNetCanFam2,106 chainNetCanFam2,233 chainNetCanFam2,235 chainNetCanFam2,237 chainNetCanFam2,239 chainNetCanFam2,341 chainNetCanFam2,343 chainNetCanFam2,682 chainNetCanFam2,684 chainNetHg19,29 chainNetHg19,31 chainNetHg19,36 chainNetHg19,38 chainNetHg19,104 chainNetHg19,106 chainNetHg19,233 chainNetHg19,235 chainNetHg19,237 chainNetHg19,239 chainNetHg19,341 chainNetHg19,343 chainNetHg19,682 chainNetHg19,684 chainNetMm9,29 chainNetMm9,31 chainNetMm9,36 chainNetMm9,38 chainNetMm9,104 chainNetMm9,106 chainNetMm9,233 chainNetMm9,235 chainNetMm9,237 chainNetMm9,239 chainNetMm9,341 chainNetMm9,343 chainNetMm9,682 chainNetMm9,684 chainNetMonDom5,29 chainNetMonDom5,31 chainNetMonDom5,36 chainNetMonDom5,38 chainNetMonDom5,104 chainNetMonDom5,106 chainNetMonDom5,233 chainNetMonDom5,235 chainNetMonDom5,237 chainNetMonDom5,239 chainNetMonDom5,341 chainNetMonDom5,343 chainNetMonDom5,682 chainNetMonDom5,684 cons6way,1081 cons6way,1082 cons6way,1091 cons6way,1092 cons6way,1286 cons6way,1288 ctgPos2,33 ctgPos2,35 est,238 est,240 est,289 est,291 est,305 est,307 est,341 est,343 est,358 est,360 gc5Base,58 gc5Base,62 gold,150 gold,152 gold,155 gold,157 intronEst,319 intronEst,321 intronEst,370 intronEst,372 intronEst,386 intronEst,388 intronEst,422 intronEst,424 intronEst,439 intronEst,441 mrna,184 mrna,186 mrna,235 mrna,237 mrna,251 mrna,253 mrna,287 mrna,289 mrna,304 mrna,306 netAilMel1,27 netAilMel1,29 netAilMel1,34 netAilMel1,36 netAilMel1,103 netAilMel1,105 netAilMel1,232 netAilMel1,234 netAilMel1,236 netAilMel1,238 netAilMel1,341 netAilMel1,343 netAilMel1,682 netAilMel1,684 netCanFam2,26 netCanFam2,28 netCanFam2,33 netCanFam2,35 netCanFam2,101 netCanFam2,103 netCanFam2,230 netCanFam2,232 netCanFam2,234 netCanFam2,236 netCanFam2,338 netCanFam2,340 netCanFam2,679 netCanFam2,681 netHg19,26 netHg19,28 netHg19,33 netHg19,35 netHg19,101 netHg19,103 netHg19,230 netHg19,232 netHg19,234 netHg19,236 netHg19,338 netHg19,340 netHg19,679 netHg19,681 netMm9,26 netMm9,28 netMm9,33 netMm9,35 netMm9,101 netMm9,103 netMm9,230 netMm9,232 netMm9,234 netMm9,236 netMm9,338 netMm9,340 netMm9,679 netMm9,681 netMonDom5,26 netMonDom5,28 netMonDom5,33 netMonDom5,35 netMonDom5,101 netMonDom5,103 netMonDom5,230 netMonDom5,232 netMonDom5,234 netMonDom5,236 netMonDom5,338 netMonDom5,340 netMonDom5,679 netMonDom5,681 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 tRNAs,205 tRNAs,207 tRNAs,289 tRNAs,291 r augustusGene,291 chainAilMel1,1046 chainAilMel1,1092 chainCanFam2,1043 chainCanFam2,1089 chainHg19,1043 chainHg19,1089 chainMm9,1043 chainMm9,1089 chainMonDom5,1043 chainMonDom5,1089 chainNetAilMel1,1049 chainNetAilMel1,1095 chainNetCanFam2,1046 chainNetCanFam2,1092 chainNetHg19,1046 chainNetHg19,1092 chainNetMm9,1046 chainNetMm9,1092 chainNetMonDom5,1046 chainNetMonDom5,1092 cons6way,2267 cons6way,2307 cons6way,2358 cons6way,2432 nestedRepeats,327 netAilMel1,1046 netAilMel1,1092 netCanFam2,1043 netCanFam2,1089 netHg19,1043 netHg19,1089 netMm9,1043 netMm9,1089 netMonDom5,1043 netMonDom5,1089 nscanGene,189 rmsk,350 tRNAs,397 r.s chainAilMel1,1011 chainCanFam2,1008 chainHg19,1008 chainMm9,1008 chainMonDom5,1008 chainNetAilMel1,1014 chainNetCanFam2,1011 chainNetHg19,1011 chainNetMm9,1011 chainNetMonDom5,1011 netAilMel1,1011 netCanFam2,1008 netHg19,1008 netMm9,1008 netMonDom5,1008 radiation cons6way,2486 random augustusGene,119 est,571 intronEst,652 random-primed est,617 intronEst,698 raney blastHg18KG,198 cons6way,2093 cons6way,2125 range cons6way,288 nestedRepeats,227 nestedRepeats,236 tRNAs,260 ranked chainAilMel1,783 chainCanFam2,780 chainHg19,780 chainMm9,780 chainMonDom5,780 chainNetAilMel1,786 chainNetCanFam2,783 chainNetHg19,783 chainNetMm9,783 chainNetMonDom5,783 netAilMel1,783 netCanFam2,780 netHg19,780 netMm9,780 netMonDom5,780 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 rate cons6way,1554 cons6way,2174 tRNAs,89 rates cons6way,2199 nscanGene,95 rather cons6way,1849 est,572 intronEst,653 ratio cons6way,1871 cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 raw cons6way,1984 rc chainAilMel1,1094 chainCanFam2,1091 chainHg19,1091 chainMm9,1091 chainMonDom5,1091 chainNetAilMel1,1097 chainNetCanFam2,1094 chainNetHg19,1094 chainNetMm9,1094 chainNetMonDom5,1094 cons6way,2434 netAilMel1,1094 netCanFam2,1091 netHg19,1091 netMm9,1091 netMonDom5,1091 rmsk,200 read est,470 gap,79 intronEst,551 reading cons6way,1161 cons6way,1177 cons6way,1194 cons6way,1220 cons6way,1293 reads gold,40 rearrangement chainAilMel1,291 chainAilMel1,495 chainAilMel1,1059 chainCanFam2,289 chainCanFam2,492 chainCanFam2,1056 chainHg19,289 chainHg19,492 chainHg19,1056 chainMm9,289 chainMm9,492 chainMm9,1056 chainMonDom5,289 chainMonDom5,492 chainMonDom5,1056 chainNetAilMel1,294 chainNetAilMel1,498 chainNetAilMel1,1062 chainNetCanFam2,292 chainNetCanFam2,495 chainNetCanFam2,1059 chainNetHg19,292 chainNetHg19,495 chainNetHg19,1059 chainNetMm9,292 chainNetMm9,495 chainNetMm9,1059 chainNetMonDom5,292 chainNetMonDom5,495 chainNetMonDom5,1059 cons6way,941 cons6way,2320 netAilMel1,291 netAilMel1,495 netAilMel1,1059 netCanFam2,289 netCanFam2,492 netCanFam2,1056 netHg19,289 netHg19,492 netHg19,1056 netMm9,289 netMm9,492 netMm9,1056 netMonDom5,289 netMonDom5,492 netMonDom5,1056 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 reasonably est,538 est,561 intronEst,619 intronEst,642 record refGene,99 xenoRefGene,65 records refGene,62 red cons6way,260 reduced intronEst,104 reference cons6way,1382 refGene,26 refGene,45 refGene,379 refGene,401 xenoRefGene,29 xenoRefGene,344 xenoRefGene,366 references augustusGene,285 chainAilMel1,1009 chainCanFam2,1006 chainHg19,1006 chainMm9,1006 chainMonDom5,1006 chainNetAilMel1,1012 chainNetCanFam2,1009 chainNetHg19,1009 chainNetMm9,1009 chainNetMonDom5,1009 cons6way,2155 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 est,742 intronEst,826 microsat,113 mrna,459 nestedRepeats,66 nestedRepeats,323 netAilMel1,1009 netCanFam2,1006 netHg19,1006 netMm9,1006 netMonDom5,1006 nscanGene,153 refGene,333 rmsk,102 rmsk,346 simpleRepeat,73 tRNAs,354 xenoRefGene,299 reflect cons6way,1705 reflects cons6way,589 cons6way,857 rmsk,213 refseq cons6way,1599 refGene,1 refGene,3 refGene,11 refGene,29 refGene,47 refGene,61 refGene,98 refGene,250 refGene,331 refGene,374 refGene,403 xenoRefGene,2 xenoRefGene,4 xenoRefGene,32 xenoRefGene,64 xenoRefGene,297 xenoRefGene,339 xenoRefGene,368 region chainAilMel1,200 chainAilMel1,398 chainCanFam2,198 chainCanFam2,395 chainHg19,198 chainHg19,395 chainMm9,198 chainMm9,395 chainMonDom5,198 chainMonDom5,395 chainNetAilMel1,203 chainNetAilMel1,401 chainNetCanFam2,201 chainNetCanFam2,398 chainNetHg19,201 chainNetHg19,398 chainNetMm9,201 chainNetMm9,398 chainNetMonDom5,201 chainNetMonDom5,398 cons6way,824 cons6way,838 cons6way,856 cons6way,890 cons6way,918 cons6way,1104 cons6way,1213 cons6way,1247 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 netAilMel1,200 netAilMel1,398 netCanFam2,198 netCanFam2,395 netHg19,198 netHg19,395 netMm9,198 netMm9,395 netMonDom5,198 netMonDom5,395 regions augustusGene,76 chainAilMel1,17 chainAilMel1,136 chainAilMel1,284 chainCanFam2,16 chainCanFam2,134 chainCanFam2,282 chainHg19,16 chainHg19,134 chainHg19,282 chainMm9,16 chainMm9,134 chainMm9,282 chainMonDom5,16 chainMonDom5,134 chainMonDom5,282 chainNetAilMel1,20 chainNetAilMel1,139 chainNetAilMel1,287 chainNetCanFam2,19 chainNetCanFam2,137 chainNetCanFam2,285 chainNetHg19,19 chainNetHg19,137 chainNetHg19,285 chainNetMm9,19 chainNetMm9,137 chainNetMm9,285 chainNetMonDom5,19 chainNetMonDom5,137 chainNetMonDom5,285 cons6way,325 cons6way,345 cons6way,460 cons6way,1672 cons6way,1678 cons6way,1770 cons6way,1775 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 microsat,14 netAilMel1,17 netAilMel1,136 netAilMel1,284 netCanFam2,16 netCanFam2,134 netCanFam2,282 netHg19,16 netHg19,134 netHg19,282 netMm9,16 netMm9,134 netMm9,282 netMonDom5,16 netMonDom5,134 netMonDom5,282 simpleRepeat,39 tRNAs,499 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,242 relationship chainAilMel1,849 chainCanFam2,846 chainHg19,846 chainMm9,846 chainMonDom5,846 chainNetAilMel1,852 chainNetCanFam2,849 chainNetHg19,849 chainNetMm9,849 chainNetMonDom5,849 cons6way,861 est,93 intronEst,174 netAilMel1,849 netCanFam2,846 netHg19,846 netMm9,846 netMonDom5,846 relationships nscanGene,87 relative chainAilMel1,865 chainCanFam2,862 chainHg19,862 chainMm9,862 chainMonDom5,862 chainNetAilMel1,868 chainNetCanFam2,865 chainNetHg19,865 chainNetMm9,865 chainNetMonDom5,865 cons6way,1045 gap,63 gold,117 netAilMel1,865 netCanFam2,862 netHg19,862 netMm9,862 netMonDom5,862 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 relevant cons6way,874 est,157 intronEst,238 mrna,103 rely cons6way,1528 cons6way,1759 remaining blastHg18KG,184 chainAilMel1,688 chainCanFam2,685 chainHg19,685 chainMm9,685 chainMonDom5,685 chainNetAilMel1,691 chainNetCanFam2,688 chainNetHg19,688 chainNetMm9,688 chainNetMonDom5,688 cons6way,1252 netAilMel1,688 netCanFam2,685 netHg19,685 netMm9,685 netMonDom5,685 removal nscanGene,254 removed chainAilMel1,579 chainCanFam2,576 chainHg19,576 chainMm9,576 chainMonDom5,576 chainNetAilMel1,582 chainNetCanFam2,579 chainNetHg19,579 chainNetMm9,579 chainNetMonDom5,579 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 netAilMel1,579 netCanFam2,576 netHg19,576 netMm9,576 netMonDom5,576 rmsk,279 rendered tRNAs,346 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeat-masked cons6way,1331 repeating rmsk,2 repeatmasked cons6way,425 repeatmasker chainAilMel1,946 chainCanFam2,943 chainHg19,943 chainMm9,943 chainMonDom5,943 chainNetAilMel1,949 chainNetCanFam2,946 chainNetHg19,946 chainNetMm9,946 chainNetMonDom5,946 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netAilMel1,946 netCanFam2,943 netHg19,943 netMm9,943 netMonDom5,943 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 repeats chainAilMel1,938 chainCanFam2,935 chainHg19,935 chainMm9,935 chainMonDom5,935 chainNetAilMel1,941 chainNetCanFam2,938 chainNetHg19,938 chainNetMm9,938 chainNetMonDom5,938 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netAilMel1,938 netCanFam2,935 netHg19,935 netMm9,935 netMonDom5,935 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 repetitive nestedRepeats,351 rmsk,374 represent chainAilMel1,134 chainAilMel1,161 chainAilMel1,445 chainAilMel1,450 chainCanFam2,132 chainCanFam2,159 chainCanFam2,442 chainCanFam2,447 chainHg19,132 chainHg19,159 chainHg19,442 chainHg19,447 chainMm9,132 chainMm9,159 chainMm9,442 chainMm9,447 chainMonDom5,132 chainMonDom5,159 chainMonDom5,442 chainMonDom5,447 chainNetAilMel1,137 chainNetAilMel1,164 chainNetAilMel1,448 chainNetAilMel1,453 chainNetCanFam2,135 chainNetCanFam2,162 chainNetCanFam2,445 chainNetCanFam2,450 chainNetHg19,135 chainNetHg19,162 chainNetHg19,445 chainNetHg19,450 chainNetMm9,135 chainNetMm9,162 chainNetMm9,445 chainNetMm9,450 chainNetMonDom5,135 chainNetMonDom5,162 chainNetMonDom5,445 chainNetMonDom5,450 cons6way,267 cons6way,282 cons6way,977 est,38 intronEst,50 netAilMel1,134 netAilMel1,161 netAilMel1,445 netAilMel1,450 netCanFam2,132 netCanFam2,159 netCanFam2,442 netCanFam2,447 netHg19,132 netHg19,159 netHg19,442 netHg19,447 netMm9,132 netMm9,159 netMm9,442 netMm9,447 netMonDom5,132 netMonDom5,159 netMonDom5,442 netMonDom5,447 tRNAs,80 represented gap,54 gap,127 gap,142 rmsk,49 representing cons6way,1539 gap,97 represents cons6way,906 ctgPos2,10 required tRNAs,217 requiring intronEst,92 res chainAilMel1,1104 chainCanFam2,1101 chainHg19,1101 chainMm9,1101 chainMonDom5,1101 chainNetAilMel1,1107 chainNetCanFam2,1104 chainNetHg19,1104 chainNetMm9,1104 chainNetMonDom5,1104 cons6way,2204 cons6way,2247 cons6way,2377 cons6way,2444 est,760 est,785 est,805 intronEst,844 intronEst,869 intronEst,889 microsat,127 mrna,477 mrna,502 mrna,522 netAilMel1,1104 netCanFam2,1101 netHg19,1101 netMm9,1101 netMonDom5,1101 nscanGene,210 nscanGene,259 refGene,342 refGene,383 refGene,416 simpleRepeat,87 tRNAs,383 tRNAs,406 tRNAs,459 tRNAs,502 xenoRefGene,307 xenoRefGene,348 xenoRefGene,381 research nestedRepeats,54 rmsk,90 resolution cons6way,2480 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 result chainAilMel1,174 chainCanFam2,172 chainHg19,172 chainMm9,172 chainMonDom5,172 chainNetAilMel1,177 chainNetCanFam2,175 chainNetHg19,175 chainNetMm9,175 chainNetMonDom5,175 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netAilMel1,174 netCanFam2,172 netHg19,172 netMm9,172 netMonDom5,172 resulting chainAilMel1,598 chainCanFam2,595 chainHg19,595 chainMm9,595 chainMonDom5,595 chainNetAilMel1,601 chainNetCanFam2,598 chainNetHg19,598 chainNetMm9,598 chainNetMonDom5,598 cons6way,1427 netAilMel1,598 netCanFam2,595 netHg19,595 netMm9,595 netMonDom5,595 retained cons6way,1989 retrieve est,580 intronEst,661 retroposons rmsk,173 rev cons6way,1573 cons6way,1747 reverse est,455 est,489 est,506 intronEst,536 intronEst,570 intronEst,587 reversible cons6way,1746 review refGene,96 xenoRefGene,62 reviewed refGene,106 xenoRefGene,72 rho cons6way,1803 ribosome tRNAs,157 richard cons6way,2097 richards cons6way,2232 richer nscanGene,78 riemer cons6way,2349 rk nscanGene,184 rna est,101 est,449 intronEst,182 intronEst,530 refGene,25 refGene,273 refGene,319 rmsk,186 rmsk,189 tRNAs,4 tRNAs,375 tRNAs,398 tRNAs,452 xenoRefGene,28 xenoRefGene,239 xenoRefGene,285 rnas refGene,251 xenoRefGene,217 robert chainAilMel1,986 chainCanFam2,983 chainHg19,983 chainMm9,983 chainMonDom5,983 chainNetAilMel1,989 chainNetCanFam2,986 chainNetHg19,986 chainNetMm9,986 chainNetMonDom5,986 nestedRepeats,307 netAilMel1,986 netCanFam2,983 netHg19,983 netMm9,983 netMonDom5,983 nscanGene,142 rmsk,330 tRNAs,351 rolling rmsk,201 ronning nscanGene,190 rosenbloom cons6way,2118 cons6way,2191 cons6way,2224 cons6way,2359 roskin cons6way,2355 ross chainAilMel1,935 chainCanFam2,932 chainHg19,932 chainMm9,932 chainMonDom5,932 chainNetAilMel1,938 chainNetCanFam2,935 chainNetHg19,935 chainNetMm9,935 chainNetMonDom5,935 netAilMel1,935 netCanFam2,932 netHg19,932 netMm9,932 netMonDom5,932 rotated tRNAs,327 rough tRNAs,258 row cons6way,1284 nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 rs cons6way,2409 run chainAilMel1,651 chainCanFam2,648 chainHg19,648 chainMm9,648 chainMonDom5,648 chainNetAilMel1,654 chainNetCanFam2,651 chainNetHg19,651 chainNetMm9,651 chainNetMonDom5,651 cons6way,309 netAilMel1,651 netCanFam2,648 netHg19,648 netMm9,648 netMonDom5,648 running cons6way,1898 runs cons6way,162 rusch nscanGene,192 ryder cons6way,2471 s augustusGene,104 augustusGene,221 augustusGene,319 blastHg18KG,131 chainAilMel1,1054 chainAilMel1,1071 chainAilMel1,1084 chainCanFam2,1051 chainCanFam2,1068 chainCanFam2,1081 chainHg19,1051 chainHg19,1068 chainHg19,1081 chainMm9,1051 chainMm9,1068 chainMm9,1081 chainMonDom5,1051 chainMonDom5,1068 chainMonDom5,1081 chainNetAilMel1,1057 chainNetAilMel1,1074 chainNetAilMel1,1087 chainNetCanFam2,1054 chainNetCanFam2,1071 chainNetCanFam2,1084 chainNetHg19,1054 chainNetHg19,1071 chainNetHg19,1084 chainNetMm9,1054 chainNetMm9,1071 chainNetMm9,1084 chainNetMonDom5,1054 chainNetMonDom5,1071 chainNetMonDom5,1084 cons6way,2009 cons6way,2233 cons6way,2315 cons6way,2332 cons6way,2424 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 nestedRepeats,286 netAilMel1,1054 netAilMel1,1071 netAilMel1,1084 netCanFam2,1051 netCanFam2,1068 netCanFam2,1081 netHg19,1051 netHg19,1068 netHg19,1081 netMm9,1051 netMm9,1068 netMm9,1081 netMonDom5,1051 netMonDom5,1068 netMonDom5,1081 nscanGene,114 rmsk,18 rmsk,293 tRNAs,479 s140-8 nscanGene,241 saccharomyces augustusGene,223 same chainAilMel1,524 chainAilMel1,539 chainCanFam2,521 chainCanFam2,536 chainHg19,521 chainHg19,536 chainMm9,521 chainMm9,536 chainMonDom5,521 chainMonDom5,536 chainNetAilMel1,527 chainNetAilMel1,542 chainNetCanFam2,524 chainNetCanFam2,539 chainNetHg19,524 chainNetHg19,539 chainNetMm9,524 chainNetMm9,539 chainNetMonDom5,524 chainNetMonDom5,539 cons6way,312 cons6way,342 nestedRepeats,143 netAilMel1,524 netAilMel1,539 netCanFam2,521 netCanFam2,536 netHg19,521 netHg19,536 netMm9,521 netMm9,536 netMonDom5,521 netMonDom5,536 tRNAs,247 sample augustusGene,133 sampling augustusGene,129 santa chainAilMel1,959 chainAilMel1,1004 chainCanFam2,956 chainCanFam2,1001 chainHg19,956 chainHg19,1001 chainMm9,956 chainMm9,1001 chainMonDom5,956 chainMonDom5,1001 chainNetAilMel1,962 chainNetAilMel1,1007 chainNetCanFam2,959 chainNetCanFam2,1004 chainNetHg19,959 chainNetHg19,1004 chainNetMm9,959 chainNetMm9,1004 chainNetMonDom5,959 chainNetMonDom5,1004 netAilMel1,959 netAilMel1,1004 netCanFam2,956 netCanFam2,1001 netHg19,956 netHg19,1001 netMm9,956 netMm9,1001 netMonDom5,956 netMonDom5,1001 sapiens cons6way,497 satellite rmsk,184 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 say cons6way,378 sayers est,755 intronEst,839 mrna,472 scaffold cons6way,888 gold,88 gold,126 scaffolds ctgPos2,1 ctgPos2,3 ctgPos2,16 scale cons6way,940 scales cons6way,1502 scally cons6way,2465 schwartz chainAilMel1,926 chainAilMel1,1083 chainCanFam2,923 chainCanFam2,1080 chainHg19,923 chainHg19,1080 chainMm9,923 chainMm9,1080 chainMonDom5,923 chainMonDom5,1080 chainNetAilMel1,929 chainNetAilMel1,1086 chainNetCanFam2,926 chainNetCanFam2,1083 chainNetHg19,926 chainNetHg19,1083 chainNetMm9,926 chainNetMm9,1083 chainNetMonDom5,926 chainNetMonDom5,1083 cons6way,2038 cons6way,2423 netAilMel1,926 netAilMel1,1083 netCanFam2,923 netCanFam2,1080 netHg19,923 netHg19,1080 netMm9,923 netMm9,1080 netMonDom5,923 netMonDom5,1080 sci chainAilMel1,1069 chainCanFam2,1066 chainHg19,1066 chainMm9,1066 chainMonDom5,1066 chainNetAilMel1,1072 chainNetCanFam2,1069 chainNetHg19,1069 chainNetMm9,1069 chainNetMonDom5,1069 cons6way,2330 netAilMel1,1069 netCanFam2,1066 netHg19,1066 netMm9,1066 netMonDom5,1066 science cons6way,2490 scientists est,740 intronEst,824 mrna,457 refGene,324 xenoRefGene,290 score chainAilMel1,680 chainCanFam2,677 chainHg19,677 chainMm9,677 chainMonDom5,677 chainNetAilMel1,683 chainNetCanFam2,680 chainNetHg19,680 chainNetMm9,680 chainNetMonDom5,680 cons6way,594 cons6way,715 cons6way,1933 cons6way,1952 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netAilMel1,680 netCanFam2,677 netHg19,677 netMm9,677 netMonDom5,677 tRNAs,116 tRNAs,121 tRNAs,259 scored cons6way,681 scores cons6way,242 cons6way,256 cons6way,266 cons6way,279 cons6way,338 cons6way,357 cons6way,363 cons6way,566 cons6way,577 cons6way,1616 cons6way,1704 cons6way,1780 cons6way,1837 cons6way,1864 cons6way,1880 cons6way,1961 cons6way,1969 cons6way,1987 tRNAs,163 tRNAs,178 tRNAs,198 scoring chainAilMel1,79 chainAilMel1,89 chainAilMel1,659 chainAilMel1,676 chainAilMel1,1031 chainCanFam2,77 chainCanFam2,87 chainCanFam2,656 chainCanFam2,673 chainCanFam2,1028 chainHg19,77 chainHg19,87 chainHg19,656 chainHg19,673 chainHg19,1028 chainMm9,77 chainMm9,87 chainMm9,656 chainMm9,673 chainMm9,1028 chainMonDom5,77 chainMonDom5,87 chainMonDom5,656 chainMonDom5,673 chainMonDom5,1028 chainNetAilMel1,82 chainNetAilMel1,92 chainNetAilMel1,662 chainNetAilMel1,679 chainNetAilMel1,1034 chainNetCanFam2,80 chainNetCanFam2,90 chainNetCanFam2,659 chainNetCanFam2,676 chainNetCanFam2,1031 chainNetHg19,80 chainNetHg19,90 chainNetHg19,659 chainNetHg19,676 chainNetHg19,1031 chainNetMm9,80 chainNetMm9,90 chainNetMm9,659 chainNetMm9,676 chainNetMm9,1031 chainNetMonDom5,80 chainNetMonDom5,90 chainNetMonDom5,659 chainNetMonDom5,676 chainNetMonDom5,1031 cons6way,1349 cons6way,1362 cons6way,2059 cons6way,2396 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netAilMel1,79 netAilMel1,89 netAilMel1,659 netAilMel1,676 netAilMel1,1031 netCanFam2,77 netCanFam2,87 netCanFam2,656 netCanFam2,673 netCanFam2,1028 netHg19,77 netHg19,87 netHg19,656 netHg19,673 netHg19,1028 netMm9,77 netMm9,87 netMm9,656 netMm9,673 netMm9,1028 netMonDom5,77 netMonDom5,87 netMonDom5,656 netMonDom5,673 netMonDom5,1028 tRNAs,294 scott chainAilMel1,925 chainCanFam2,922 chainHg19,922 chainMm9,922 chainMonDom5,922 chainNetAilMel1,928 chainNetCanFam2,925 chainNetHg19,925 chainNetMm9,925 chainNetMonDom5,925 cons6way,2037 netAilMel1,925 netCanFam2,922 netHg19,922 netMm9,922 netMonDom5,922 screens nestedRepeats,32 rmsk,22 scrna rmsk,193 search blastHg18KG,166 tRNAs,62 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 secondary tRNAs,76 tRNAs,236 tRNAs,314 tRNAs,323 tRNAs,343 section cons6way,1129 nestedRepeats,67 rmsk,103 sections chainAilMel1,806 chainCanFam2,803 chainHg19,803 chainMm9,803 chainMonDom5,803 chainNetAilMel1,809 chainNetCanFam2,806 chainNetHg19,806 chainNetMm9,806 chainNetMonDom5,806 netAilMel1,806 netCanFam2,803 netHg19,803 netMm9,803 netMonDom5,803 see augustusGene,42 blastHg18KG,152 cons6way,472 cons6way,1416 ctgPos2,40 gap,169 gold,63 gold,161 intronEst,122 microsat,101 nestedRepeats,296 nestedRepeats,370 refGene,71 refGene,241 rmsk,319 rmsk,393 simpleRepeat,63 xenoRefGene,207 seen cons6way,1997 segment cons6way,1110 cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cons6way,1909 cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select cons6way,1115 cons6way,1137 cons6way,1605 refGene,194 xenoRefGene,160 selected est,293 est,309 est,362 intronEst,374 intronEst,390 intronEst,443 mrna,239 mrna,255 mrna,308 selecting microsat,60 selection cons6way,187 cons6way,286 cons6way,691 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,117 sensitive cons6way,160 sep chainAilMel1,1074 chainCanFam2,1071 chainHg19,1071 chainMm9,1071 chainMonDom5,1071 chainNetAilMel1,1077 chainNetCanFam2,1074 chainNetHg19,1074 chainNetMm9,1074 chainNetMonDom5,1074 cons6way,2335 nestedRepeats,356 netAilMel1,1074 netCanFam2,1071 netHg19,1071 netMm9,1071 netMonDom5,1071 rmsk,379 separate cons6way,1836 separated est,264 intronEst,345 mrna,210 separately cons6way,117 sequence augustusGene,32 augustusGene,70 blastHg18KG,75 chainAilMel1,168 chainAilMel1,294 chainAilMel1,1034 chainCanFam2,166 chainCanFam2,292 chainCanFam2,1031 chainHg19,166 chainHg19,292 chainHg19,1031 chainMm9,166 chainMm9,292 chainMm9,1031 chainMonDom5,166 chainMonDom5,292 chainMonDom5,1031 chainNetAilMel1,171 chainNetAilMel1,297 chainNetAilMel1,1037 chainNetCanFam2,169 chainNetCanFam2,295 chainNetCanFam2,1034 chainNetHg19,169 chainNetHg19,295 chainNetHg19,1034 chainNetMm9,169 chainNetMm9,295 chainNetMm9,1034 chainNetMonDom5,169 chainNetMonDom5,295 chainNetMonDom5,1034 cons6way,435 cons6way,448 cons6way,872 cons6way,1040 cons6way,1050 cons6way,1333 cons6way,2399 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 est,18 est,89 est,398 est,407 est,581 est,718 est,730 est,737 gap,112 gap,157 gold,154 gold,160 intronEst,20 intronEst,73 intronEst,170 intronEst,479 intronEst,488 intronEst,662 intronEst,799 intronEst,814 intronEst,821 mrna,344 mrna,434 mrna,447 mrna,454 netAilMel1,168 netAilMel1,294 netAilMel1,1034 netCanFam2,166 netCanFam2,292 netCanFam2,1031 netHg19,166 netHg19,292 netHg19,1031 netMm9,166 netMm9,292 netMm9,1031 netMonDom5,166 netMonDom5,292 netMonDom5,1031 nscanGene,45 nscanGene,81 refGene,308 refGene,320 refGene,402 refGene,407 rmsk,48 rmsk,62 tRNAs,74 tRNAs,182 tRNAs,380 tRNAs,399 tRNAs,456 xenoRefGene,274 xenoRefGene,286 xenoRefGene,367 xenoRefGene,372 sequences blastHg18KG,64 cons6way,370 cons6way,1466 cons6way,2291 cons6way,2370 est,29 est,600 est,608 intronEst,41 intronEst,681 intronEst,689 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 nscanGene,74 nscanGene,92 refGene,27 refGene,46 refGene,380 rmsk,24 rmsk,32 simpleRepeat,84 tRNAs,428 xenoRefGene,30 xenoRefGene,345 sequencing chainAilMel1,888 chainCanFam2,885 chainHg19,885 chainMm9,885 chainMonDom5,885 chainNetAilMel1,891 chainNetCanFam2,888 chainNetHg19,888 chainNetMm9,888 chainNetMonDom5,888 ctgPos2,6 gap,6 gc5Base,10 gold,7 gold,66 netAilMel1,888 netCanFam2,885 netHg19,885 netMm9,885 netMonDom5,885 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 set blastHg18KG,146 cons6way,317 cons6way,1602 cons6way,2013 tRNAs,71 sets augustusGene,158 cons6way,336 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 several cons6way,1811 est,423 intronEst,504 mrna,362 sf blastHg18KG,154 shade nestedRepeats,194 shaded est,67 mrna,48 nestedRepeats,182 shades nestedRepeats,202 shading intronEst,146 nestedRepeats,240 refGene,91 rmsk,208 rmsk,239 xenoRefGene,57 short cons6way,979 cons6way,1768 rmsk,153 shorter cons6way,946 shotgun ctgPos2,38 should est,329 est,633 intronEst,410 intronEst,714 mrna,275 tRNAs,226 show intronEst,29 intronEst,62 refGene,157 xenoRefGene,123 shown chainAilMel1,42 chainAilMel1,55 chainCanFam2,41 chainCanFam2,54 chainHg19,41 chainHg19,54 chainMm9,41 chainMm9,54 chainMonDom5,41 chainMonDom5,54 chainNetAilMel1,45 chainNetAilMel1,58 chainNetCanFam2,44 chainNetCanFam2,57 chainNetHg19,44 chainNetHg19,57 chainNetMm9,44 chainNetMm9,57 chainNetMonDom5,44 chainNetMonDom5,57 cons6way,244 cons6way,258 cons6way,667 cons6way,900 cons6way,1065 est,147 gold,109 intronEst,228 microsat,48 mrna,93 netAilMel1,42 netAilMel1,55 netCanFam2,41 netCanFam2,54 netHg19,41 netHg19,54 netMm9,41 netMm9,54 netMonDom5,41 netMonDom5,54 shows augustusGene,15 augustusGene,108 chainAilMel1,16 chainAilMel1,63 chainAilMel1,265 chainCanFam2,15 chainCanFam2,62 chainCanFam2,263 chainHg19,15 chainHg19,62 chainHg19,263 chainMm9,15 chainMm9,62 chainMm9,263 chainMonDom5,15 chainMonDom5,62 chainMonDom5,263 chainNetAilMel1,19 chainNetAilMel1,66 chainNetAilMel1,268 chainNetCanFam2,18 chainNetCanFam2,65 chainNetCanFam2,266 chainNetHg19,18 chainNetHg19,65 chainNetHg19,266 chainNetMm9,18 chainNetMm9,65 chainNetMm9,266 chainNetMonDom5,18 chainNetMonDom5,65 chainNetMonDom5,266 cons6way,12 cons6way,1017 est,13 gc5Base,16 gold,11 intronEst,15 mrna,14 nestedRepeats,17 nestedRepeats,81 netAilMel1,16 netAilMel1,63 netAilMel1,265 netCanFam2,15 netCanFam2,62 netCanFam2,263 netHg19,15 netHg19,62 netHg19,263 netMm9,15 netMm9,62 netMm9,263 netMonDom5,15 netMonDom5,62 netMonDom5,263 nscanGene,12 refGene,14 xenoRefGene,13 side cons6way,914 cons6way,923 est,596 gap,72 intronEst,677 siepel cons6way,417 cons6way,1658 cons6way,1789 cons6way,2072 cons6way,2193 cons6way,2214 cons6way,2257 signal augustusGene,48 augustusGene,63 signatures cons6way,185 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 signs intronEst,30 similar cons6way,766 cons6way,1005 cons6way,1740 nestedRepeats,199 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 simultaneously chainAilMel1,101 chainCanFam2,99 chainHg19,99 chainMm9,99 chainMonDom5,99 chainNetAilMel1,104 chainNetCanFam2,102 chainNetHg19,102 chainNetMm9,102 chainNetMonDom5,102 cons6way,569 netAilMel1,101 netCanFam2,99 netHg19,99 netMm9,99 netMonDom5,99 since chainAilMel1,573 chainCanFam2,570 chainHg19,570 chainMm9,570 chainMonDom5,570 chainNetAilMel1,576 chainNetCanFam2,573 chainNetHg19,573 chainNetMm9,573 chainNetMonDom5,573 netAilMel1,573 netCanFam2,570 netHg19,570 netMm9,570 netMonDom5,570 sine rmsk,157 sines tRNAs,150 single blastHg18KG,99 chainAilMel1,128 chainAilMel1,137 chainAilMel1,622 chainAilMel1,627 chainCanFam2,126 chainCanFam2,135 chainCanFam2,619 chainCanFam2,624 chainHg19,126 chainHg19,135 chainHg19,619 chainHg19,624 chainMm9,126 chainMm9,135 chainMm9,619 chainMm9,624 chainMonDom5,126 chainMonDom5,135 chainMonDom5,619 chainMonDom5,624 chainNetAilMel1,131 chainNetAilMel1,140 chainNetAilMel1,625 chainNetAilMel1,630 chainNetCanFam2,129 chainNetCanFam2,138 chainNetCanFam2,622 chainNetCanFam2,627 chainNetHg19,129 chainNetHg19,138 chainNetHg19,622 chainNetHg19,627 chainNetMm9,129 chainNetMm9,138 chainNetMm9,622 chainNetMm9,627 chainNetMonDom5,129 chainNetMonDom5,138 chainNetMonDom5,622 chainNetMonDom5,627 cons6way,777 est,630 est,682 intronEst,711 intronEst,763 mrna,398 nestedRepeats,178 netAilMel1,128 netAilMel1,137 netAilMel1,622 netAilMel1,627 netCanFam2,126 netCanFam2,135 netCanFam2,619 netCanFam2,624 netHg19,126 netHg19,135 netHg19,619 netHg19,624 netMm9,126 netMm9,135 netMm9,619 netMm9,624 netMonDom5,126 netMonDom5,135 netMonDom5,619 netMonDom5,624 refGene,272 xenoRefGene,238 single-coverage cons6way,1606 single-lined chainAilMel1,208 chainCanFam2,206 chainHg19,206 chainMm9,206 chainMonDom5,206 chainNetAilMel1,211 chainNetCanFam2,209 chainNetHg19,209 chainNetMm9,209 chainNetMonDom5,209 netAilMel1,208 netCanFam2,206 netHg19,206 netMm9,206 netMonDom5,206 single-read est,28 intronEst,40 site cons6way,1636 cons6way,1648 cons6way,1684 sites augustusGene,54 augustusGene,59 cons6way,149 cons6way,165 cons6way,205 cons6way,234 cons6way,248 cons6way,1545 cons6way,1585 cons6way,1594 cons6way,1743 cons6way,2172 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 size blastHg18KG,93 cons6way,591 cons6way,1060 cons6way,1074 cons6way,1766 sizes cons6way,1087 sj cons6way,2462 skepticism est,638 intronEst,719 sliding cons6way,1762 slower cons6way,226 sm nscanGene,180 refGene,357 xenoRefGene,322 smallsize chainAilMel1,706 chainCanFam2,703 chainHg19,703 chainMm9,703 chainMonDom5,703 chainNetAilMel1,709 chainNetCanFam2,706 chainNetHg19,706 chainNetMm9,706 chainNetMonDom5,706 netAilMel1,706 netCanFam2,703 netHg19,703 netMm9,703 netMonDom5,703 smit chainAilMel1,943 chainAilMel1,1087 chainCanFam2,940 chainCanFam2,1084 chainHg19,940 chainHg19,1084 chainMm9,940 chainMm9,1084 chainMonDom5,940 chainMonDom5,1084 chainNetAilMel1,946 chainNetAilMel1,1090 chainNetCanFam2,943 chainNetCanFam2,1087 chainNetHg19,943 chainNetHg19,1087 chainNetMm9,943 chainNetMm9,1087 chainNetMonDom5,943 chainNetMonDom5,1087 cons6way,2353 cons6way,2427 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netAilMel1,943 netAilMel1,1087 netCanFam2,940 netCanFam2,1084 netHg19,940 netHg19,1084 netMm9,940 netMm9,1084 netMonDom5,940 netMonDom5,1084 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 smith nscanGene,183 smooth cons6way,138 snrna rmsk,192 so chainAilMel1,437 chainCanFam2,434 chainHg19,434 chainMm9,434 chainMonDom5,434 chainNetAilMel1,440 chainNetCanFam2,437 chainNetHg19,437 chainNetMm9,437 chainNetMonDom5,437 netAilMel1,437 netCanFam2,434 netHg19,434 netMm9,434 netMonDom5,434 tRNAs,277 soft-masked rmsk,305 software nestedRepeats,255 nscanGene,21 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 est,155 est,552 est,568 est,670 intronEst,236 intronEst,633 intronEst,649 intronEst,751 mrna,101 nestedRepeats,207 rmsk,105 rmsk,268 sometimes simpleRepeat,50 somewhere cons6way,997 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainAilMel1,775 chainCanFam2,772 chainHg19,772 chainMm9,772 chainMonDom5,772 chainNetAilMel1,778 chainNetCanFam2,775 chainNetHg19,775 chainNetMm9,775 chainNetMonDom5,775 netAilMel1,775 netCanFam2,772 netHg19,772 netMm9,772 netMonDom5,772 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 space cons6way,1055 cons6way,1068 est,267 intronEst,348 mrna,213 space-time cons6way,2283 spaces gold,107 span chainAilMel1,396 chainCanFam2,393 chainHg19,393 chainMm9,393 chainMonDom5,393 chainNetAilMel1,399 chainNetCanFam2,396 chainNetHg19,396 chainNetMm9,396 chainNetMonDom5,396 netAilMel1,396 netCanFam2,393 netHg19,393 netMm9,393 netMonDom5,393 special nscanGene,127 specialized simpleRepeat,29 species augustusGene,166 augustusGene,173 augustusGene,181 augustusGene,186 augustusGene,200 augustusGene,229 augustusGene,244 chainAilMel1,118 chainAilMel1,171 chainAilMel1,190 chainAilMel1,894 chainCanFam2,116 chainCanFam2,169 chainCanFam2,188 chainCanFam2,891 chainHg19,116 chainHg19,169 chainHg19,188 chainHg19,891 chainMm9,116 chainMm9,169 chainMm9,188 chainMm9,891 chainMonDom5,116 chainMonDom5,169 chainMonDom5,188 chainMonDom5,891 chainNetAilMel1,121 chainNetAilMel1,174 chainNetAilMel1,193 chainNetAilMel1,897 chainNetCanFam2,119 chainNetCanFam2,172 chainNetCanFam2,191 chainNetCanFam2,894 chainNetHg19,119 chainNetHg19,172 chainNetHg19,191 chainNetHg19,894 chainNetMm9,119 chainNetMm9,172 chainNetMm9,191 chainNetMm9,894 chainNetMonDom5,119 chainNetMonDom5,172 chainNetMonDom5,191 chainNetMonDom5,894 cons6way,6 cons6way,18 cons6way,37 cons6way,316 cons6way,349 cons6way,484 cons6way,631 cons6way,694 cons6way,704 cons6way,784 cons6way,810 cons6way,814 cons6way,832 cons6way,845 cons6way,850 cons6way,867 cons6way,879 cons6way,898 cons6way,935 cons6way,958 cons6way,1002 cons6way,1117 cons6way,1160 cons6way,1174 cons6way,1188 cons6way,1197 cons6way,1210 cons6way,1223 cons6way,1229 cons6way,1236 cons6way,1253 cons6way,1259 cons6way,1276 cons6way,1280 cons6way,1327 cons6way,1375 cons6way,1415 cons6way,1492 cons6way,1713 cons6wayViewalign,7 cons6wayViewelements,7 cons6wayViewphastcons,8 cons6wayViewphyloP,8 multiz6way,7 netAilMel1,118 netAilMel1,171 netAilMel1,190 netAilMel1,894 netCanFam2,116 netCanFam2,169 netCanFam2,188 netCanFam2,891 netHg19,116 netHg19,169 netHg19,188 netHg19,891 netMm9,116 netMm9,169 netMm9,188 netMm9,891 netMonDom5,116 netMonDom5,169 netMonDom5,188 netMonDom5,891 species-specific augustusGene,156 cons6way,1249 cons6way,1292 specific cons6way,726 est,194 intronEst,275 mrna,140 simpleRepeat,53 tRNAs,70 tRNAs,233 tRNAs,270 specification ctgPos2,43 gap,172 gold,164 spieth cons6way,2228 splice augustusGene,53 spliced intronEst,1 intronEst,8 intronEst,58 splicing augustusGene,123 intronEst,32 intronEst,93 split chainAilMel1,577 chainCanFam2,574 chainHg19,574 chainMm9,574 chainMonDom5,574 chainNetAilMel1,580 chainNetCanFam2,577 chainNetHg19,577 chainNetMm9,577 chainNetMonDom5,577 netAilMel1,577 netCanFam2,574 netHg19,574 netMm9,574 netMonDom5,574 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 spring cons6way,420 cons6way,2075 springer cons6way,2276 cons6way,2478 square cons6way,943 squish nestedRepeats,159 sr tRNAs,395 tRNAs,443 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srprna rmsk,194 ss nscanGene,155 st nscanGene,32 nscanGene,121 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 stanhope cons6way,2473 stanke augustusGene,103 augustusGene,251 augustusGene,284 augustusGene,286 augustusGene,316 start augustusGene,58 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 est,560 intronEst,641 state chainAilMel1,920 chainAilMel1,1023 chainCanFam2,917 chainCanFam2,1020 chainHg19,917 chainHg19,1020 chainMm9,917 chainMm9,1020 chainMonDom5,917 chainMonDom5,1020 chainNetAilMel1,923 chainNetAilMel1,1026 chainNetCanFam2,920 chainNetCanFam2,1023 chainNetHg19,920 chainNetHg19,1023 chainNetMm9,920 chainNetMm9,1023 chainNetMonDom5,920 chainNetMonDom5,1023 cons6way,52 cons6way,400 cons6way,1669 cons6way,1675 cons6way,1699 cons6way,1923 cons6way,2045 cons6way,2100 cons6way,2419 netAilMel1,920 netAilMel1,1023 netCanFam2,917 netCanFam2,1020 netHg19,917 netHg19,1020 netMm9,917 netMm9,1020 netMonDom5,917 netMonDom5,1020 statistical augustusGene,47 cons6way,2269 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 stefanie augustusGene,267 still tRNAs,142 storage chainAilMel1,977 chainCanFam2,974 chainHg19,974 chainMm9,974 chainMonDom5,974 chainNetAilMel1,980 chainNetCanFam2,977 chainNetHg19,977 chainNetMm9,977 chainNetMonDom5,977 netAilMel1,977 netCanFam2,974 netHg19,974 netMm9,974 netMonDom5,974 strand chainAilMel1,248 chainCanFam2,246 chainHg19,246 chainMm9,246 chainMonDom5,246 chainNetAilMel1,251 chainNetCanFam2,249 chainNetHg19,249 chainNetMm9,249 chainNetMonDom5,249 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 est,74 intronEst,155 nestedRepeats,144 nestedRepeats,155 netAilMel1,248 netCanFam2,246 netHg19,246 netMm9,246 netMonDom5,246 strengths cons6way,155 structural tRNAs,184 structure augustusGene,113 nscanGene,19 nscanGene,234 tRNAs,77 tRNAs,237 tRNAs,315 structures augustusGene,164 tRNAs,324 tRNAs,344 studies tRNAs,272 studying chainAilMel1,289 chainCanFam2,287 chainHg19,287 chainMm9,287 chainMonDom5,287 chainNetAilMel1,292 chainNetCanFam2,290 chainNetHg19,290 chainNetMm9,290 chainNetMonDom5,290 netAilMel1,289 netCanFam2,287 netHg19,287 netMm9,287 netMonDom5,287 submit refGene,52 submitted est,732 intronEst,816 mrna,449 submodel augustusGene,331 subsections chainAilMel1,641 chainCanFam2,638 chainHg19,638 chainMm9,638 chainMonDom5,638 chainNetAilMel1,644 chainNetCanFam2,641 chainNetHg19,641 chainNetMm9,641 chainNetMonDom5,641 cons6way,1353 netAilMel1,641 netCanFam2,638 netHg19,638 netMm9,638 netMonDom5,638 subset est,133 intronEst,214 microsat,54 mrna,79 substantial chainAilMel1,167 chainCanFam2,165 chainHg19,165 chainMm9,165 chainMonDom5,165 chainNetAilMel1,170 chainNetCanFam2,168 chainNetHg19,168 chainNetMm9,168 chainNetMonDom5,168 netAilMel1,167 netCanFam2,165 netHg19,165 netMm9,165 netMonDom5,165 substitution cons6way,1553 cons6way,1633 cons6way,1723 cons6way,1748 cons6way,2198 nscanGene,94 subtracks chainAilMel1,30 chainAilMel1,37 chainCanFam2,29 chainCanFam2,36 chainHg19,29 chainHg19,36 chainMm9,29 chainMm9,36 chainMonDom5,29 chainMonDom5,36 chainNetAilMel1,33 chainNetAilMel1,40 chainNetCanFam2,32 chainNetCanFam2,39 chainNetHg19,32 chainNetHg19,39 chainNetMm9,32 chainNetMm9,39 chainNetMonDom5,32 chainNetMonDom5,39 netAilMel1,30 netAilMel1,37 netCanFam2,29 netCanFam2,36 netHg19,29 netHg19,36 netMm9,29 netMm9,36 netMonDom5,29 netMonDom5,36 subtree cons6way,1853 cons6way,1858 successful est,590 intronEst,671 such chainAilMel1,855 chainCanFam2,852 chainHg19,852 chainMm9,852 chainMonDom5,852 chainNetAilMel1,858 chainNetCanFam2,855 chainNetHg19,855 chainNetMm9,855 chainNetMonDom5,855 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netAilMel1,855 netCanFam2,852 netHg19,852 netMm9,852 netMonDom5,852 sufficient cons6way,1054 suggestions refGene,51 summary cons6way,1481 suppl augustusGene,336 nscanGene,239 supported gap,77 supports cons6way,1810 symbols cons6way,1027 symp chainAilMel1,1037 chainCanFam2,1034 chainHg19,1034 chainMm9,1034 chainMonDom5,1034 chainNetAilMel1,1040 chainNetCanFam2,1037 chainNetHg19,1037 chainNetMm9,1037 chainNetMonDom5,1037 cons6way,2402 netAilMel1,1037 netCanFam2,1034 netHg19,1034 netMm9,1034 netMonDom5,1034 syn chainAilMel1,520 chainCanFam2,517 chainHg19,517 chainMm9,517 chainMonDom5,517 chainNetAilMel1,523 chainNetCanFam2,520 chainNetHg19,520 chainNetMm9,520 chainNetMonDom5,520 netAilMel1,520 netCanFam2,517 netHg19,517 netMm9,517 netMonDom5,517 syntenic chainAilMel1,283 chainAilMel1,862 chainCanFam2,281 chainCanFam2,859 chainHg19,281 chainHg19,859 chainMm9,281 chainMm9,859 chainMonDom5,281 chainMonDom5,859 chainNetAilMel1,286 chainNetAilMel1,865 chainNetCanFam2,284 chainNetCanFam2,862 chainNetHg19,284 chainNetHg19,862 chainNetMm9,284 chainNetMm9,862 chainNetMonDom5,284 chainNetMonDom5,862 netAilMel1,283 netAilMel1,862 netCanFam2,281 netCanFam2,859 netHg19,281 netHg19,859 netMm9,281 netMm9,859 netMonDom5,281 netMonDom5,859 syntenically augustusGene,297 synteny chainAilMel1,33 chainCanFam2,32 chainHg19,32 chainMm9,32 chainMonDom5,32 chainNetAilMel1,36 chainNetCanFam2,35 chainNetHg19,35 chainNetMm9,35 chainNetMonDom5,35 netAilMel1,33 netCanFam2,32 netHg19,32 netMm9,32 netMonDom5,32 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainAilMel1,80 chainCanFam2,78 chainHg19,78 chainMm9,78 chainMonDom5,78 chainNetAilMel1,83 chainNetCanFam2,81 chainNetHg19,81 chainNetMm9,81 chainNetMonDom5,81 netAilMel1,80 netCanFam2,78 netHg19,78 netMm9,78 netMonDom5,78 systems chainAilMel1,90 chainCanFam2,88 chainHg19,88 chainMm9,88 chainMonDom5,88 chainNetAilMel1,93 chainNetCanFam2,91 chainNetHg19,91 chainNetMm9,91 chainNetMonDom5,91 netAilMel1,90 netCanFam2,88 netHg19,88 netMm9,88 netMonDom5,88 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 refGene,397 xenoRefGene,362 t-123-31-11491 chainAilMel1,674 chainCanFam2,671 chainHg19,671 chainMm9,671 chainMonDom5,671 chainNetAilMel1,677 chainNetCanFam2,674 chainNetHg19,674 chainNetMm9,674 chainNetMonDom5,674 netAilMel1,674 netCanFam2,671 netHg19,671 netMm9,671 netMonDom5,671 table augustusGene,225 cons6way,513 cons6way,1278 cons6way,1308 cons6way,1482 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 est,219 est,222 est,241 intronEst,300 intronEst,303 intronEst,322 mrna,165 mrna,168 mrna,187 tables cons6way,1504 cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 tablesize chainAilMel1,704 chainCanFam2,701 chainHg19,701 chainMm9,701 chainMonDom5,701 chainNetAilMel1,707 chainNetCanFam2,704 chainNetHg19,704 chainNetMm9,704 chainNetMonDom5,704 netAilMel1,704 netCanFam2,701 netHg19,701 netMm9,701 netMonDom5,701 tags est,19 intronEst,21 tail est,501 intronEst,582 taken est,472 intronEst,553 refGene,21 xenoRefGene,24 taking cons6way,1962 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 target cons6way,204 nscanGene,43 target-coverage cons6way,1800 target-informant nscanGene,63 task est,161 intronEst,242 mrna,107 tatusova refGene,396 xenoRefGene,361 tblastn blastHg18KG,8 blastHg18KG,17 blastHg18KG,78 blastHg18KG,138 techniques est,566 intronEst,647 technology gap,21 gold,20 gold,71 teeling cons6way,2469 temperature augustusGene,141 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 tendency cons6way,1727 tenney nscanGene,136 term est,168 intronEst,249 mrna,114 terminal rmsk,167 terms est,212 est,258 intronEst,293 intronEst,339 mrna,158 mrna,204 test cons6way,1872 text est,175 est,215 est,255 intronEst,256 intronEst,296 intronEst,336 mrna,121 mrna,161 mrna,201 texture cons6way,146 tgap chainAilMel1,732 chainCanFam2,729 chainHg19,729 chainMm9,729 chainMonDom5,729 chainNetAilMel1,735 chainNetCanFam2,732 chainNetHg19,732 chainNetMm9,732 chainNetMonDom5,732 netAilMel1,732 netCanFam2,729 netHg19,729 netMm9,729 netMonDom5,729 than blastHg18KG,106 chainAilMel1,85 chainAilMel1,509 chainCanFam2,83 chainCanFam2,506 chainHg19,83 chainHg19,506 chainMm9,83 chainMm9,506 chainMonDom5,83 chainMonDom5,506 chainNetAilMel1,88 chainNetAilMel1,512 chainNetCanFam2,86 chainNetCanFam2,509 chainNetHg19,86 chainNetHg19,509 chainNetMm9,86 chainNetMm9,509 chainNetMonDom5,86 chainNetMonDom5,509 cons6way,140 cons6way,217 cons6way,227 cons6way,1850 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 est,280 est,573 intronEst,361 intronEst,654 mrna,226 nestedRepeats,213 nestedRepeats,271 netAilMel1,85 netAilMel1,509 netCanFam2,83 netCanFam2,506 netHg19,83 netHg19,506 netMm9,83 netMm9,506 netMonDom5,83 netMonDom5,506 refGene,266 tRNAs,92 xenoRefGene,22 xenoRefGene,232 thanks augustusGene,248 nestedRepeats,303 nscanGene,110 nscanGene,128 rmsk,326 that blastHg18KG,65 blastHg18KG,116 chainAilMel1,21 chainAilMel1,46 chainAilMel1,81 chainAilMel1,141 chainAilMel1,165 chainAilMel1,368 chainAilMel1,395 chainAilMel1,417 chainAilMel1,569 chainAilMel1,825 chainAilMel1,836 chainCanFam2,20 chainCanFam2,45 chainCanFam2,79 chainCanFam2,139 chainCanFam2,163 chainCanFam2,365 chainCanFam2,392 chainCanFam2,414 chainCanFam2,566 chainCanFam2,822 chainCanFam2,833 chainHg19,20 chainHg19,45 chainHg19,79 chainHg19,139 chainHg19,163 chainHg19,365 chainHg19,392 chainHg19,414 chainHg19,566 chainHg19,822 chainHg19,833 chainMm9,20 chainMm9,45 chainMm9,79 chainMm9,139 chainMm9,163 chainMm9,365 chainMm9,392 chainMm9,414 chainMm9,566 chainMm9,822 chainMm9,833 chainMonDom5,20 chainMonDom5,45 chainMonDom5,79 chainMonDom5,139 chainMonDom5,163 chainMonDom5,365 chainMonDom5,392 chainMonDom5,414 chainMonDom5,566 chainMonDom5,822 chainMonDom5,833 chainNetAilMel1,24 chainNetAilMel1,49 chainNetAilMel1,84 chainNetAilMel1,144 chainNetAilMel1,168 chainNetAilMel1,371 chainNetAilMel1,398 chainNetAilMel1,420 chainNetAilMel1,572 chainNetAilMel1,828 chainNetAilMel1,839 chainNetCanFam2,23 chainNetCanFam2,48 chainNetCanFam2,82 chainNetCanFam2,142 chainNetCanFam2,166 chainNetCanFam2,368 chainNetCanFam2,395 chainNetCanFam2,417 chainNetCanFam2,569 chainNetCanFam2,825 chainNetCanFam2,836 chainNetHg19,23 chainNetHg19,48 chainNetHg19,82 chainNetHg19,142 chainNetHg19,166 chainNetHg19,368 chainNetHg19,395 chainNetHg19,417 chainNetHg19,569 chainNetHg19,825 chainNetHg19,836 chainNetMm9,23 chainNetMm9,48 chainNetMm9,82 chainNetMm9,142 chainNetMm9,166 chainNetMm9,368 chainNetMm9,395 chainNetMm9,417 chainNetMm9,569 chainNetMm9,825 chainNetMm9,836 chainNetMonDom5,23 chainNetMonDom5,48 chainNetMonDom5,82 chainNetMonDom5,142 chainNetMonDom5,166 chainNetMonDom5,368 chainNetMonDom5,395 chainNetMonDom5,417 chainNetMonDom5,569 chainNetMonDom5,825 chainNetMonDom5,836 cons6way,84 cons6way,88 cons6way,210 cons6way,371 cons6way,657 cons6way,702 cons6way,909 cons6way,991 cons6way,1237 cons6way,1346 cons6way,1527 cons6way,1626 cons6way,1689 cons6way,1913 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 est,36 est,63 est,117 est,224 est,248 est,296 est,311 est,328 est,352 est,370 est,387 est,402 est,655 est,676 gap,118 gap,158 gold,82 intronEst,5 intronEst,28 intronEst,48 intronEst,198 intronEst,305 intronEst,329 intronEst,377 intronEst,392 intronEst,409 intronEst,433 intronEst,451 intronEst,468 intronEst,483 intronEst,736 intronEst,757 microsat,15 mrna,44 mrna,63 mrna,170 mrna,194 mrna,242 mrna,257 mrna,274 mrna,298 mrna,316 mrna,333 nestedRepeats,265 nestedRepeats,273 netAilMel1,21 netAilMel1,46 netAilMel1,81 netAilMel1,141 netAilMel1,165 netAilMel1,368 netAilMel1,395 netAilMel1,417 netAilMel1,569 netAilMel1,825 netAilMel1,836 netCanFam2,20 netCanFam2,45 netCanFam2,79 netCanFam2,139 netCanFam2,163 netCanFam2,365 netCanFam2,392 netCanFam2,414 netCanFam2,566 netCanFam2,822 netCanFam2,833 netHg19,20 netHg19,45 netHg19,79 netHg19,139 netHg19,163 netHg19,365 netHg19,392 netHg19,414 netHg19,566 netHg19,822 netHg19,833 netMm9,20 netMm9,45 netMm9,79 netMm9,139 netMm9,163 netMm9,365 netMm9,392 netMm9,414 netMm9,566 netMm9,822 netMm9,833 netMonDom5,20 netMonDom5,45 netMonDom5,79 netMonDom5,139 netMonDom5,163 netMonDom5,365 netMonDom5,392 netMonDom5,414 netMonDom5,566 netMonDom5,822 netMonDom5,833 refGene,180 rmsk,42 rmsk,259 tRNAs,29 tRNAs,79 tRNAs,186 tRNAs,284 tRNAs,296 xenoRefGene,146 the augustusGene,20 augustusGene,25 augustusGene,30 augustusGene,38 augustusGene,61 augustusGene,69 augustusGene,81 augustusGene,109 augustusGene,143 augustusGene,165 augustusGene,172 augustusGene,177 augustusGene,185 augustusGene,240 augustusGene,250 augustusGene,255 augustusGene,258 augustusGene,261 augustusGene,272 augustusGene,275 blastHg18KG,20 blastHg18KG,23 blastHg18KG,30 blastHg18KG,37 blastHg18KG,41 blastHg18KG,49 blastHg18KG,53 blastHg18KG,61 blastHg18KG,73 blastHg18KG,77 blastHg18KG,81 blastHg18KG,98 blastHg18KG,109 blastHg18KG,121 blastHg18KG,129 blastHg18KG,142 blastHg18KG,183 chainAilMel1,19 chainAilMel1,38 chainAilMel1,60 chainAilMel1,73 chainAilMel1,119 chainAilMel1,132 chainAilMel1,149 chainAilMel1,156 chainAilMel1,202 chainAilMel1,205 chainAilMel1,231 chainAilMel1,241 chainAilMel1,246 chainAilMel1,254 chainAilMel1,262 chainAilMel1,266 chainAilMel1,275 chainAilMel1,292 chainAilMel1,301 chainAilMel1,316 chainAilMel1,331 chainAilMel1,337 chainAilMel1,340 chainAilMel1,355 chainAilMel1,361 chainAilMel1,365 chainAilMel1,385 chainAilMel1,391 chainAilMel1,405 chainAilMel1,423 chainAilMel1,440 chainAilMel1,443 chainAilMel1,448 chainAilMel1,461 chainAilMel1,474 chainAilMel1,476 chainAilMel1,483 chainAilMel1,486 chainAilMel1,493 chainAilMel1,499 chainAilMel1,512 chainAilMel1,523 chainAilMel1,527 chainAilMel1,530 chainAilMel1,538 chainAilMel1,542 chainAilMel1,548 chainAilMel1,559 chainAilMel1,562 chainAilMel1,574 chainAilMel1,581 chainAilMel1,583 chainAilMel1,591 chainAilMel1,597 chainAilMel1,606 chainAilMel1,609 chainAilMel1,639 chainAilMel1,644 chainAilMel1,653 chainAilMel1,657 chainAilMel1,664 chainAilMel1,687 chainAilMel1,695 chainAilMel1,765 chainAilMel1,769 chainAilMel1,777 chainAilMel1,781 chainAilMel1,785 chainAilMel1,793 chainAilMel1,838 chainAilMel1,848 chainAilMel1,867 chainAilMel1,870 chainAilMel1,882 chainAilMel1,906 chainAilMel1,948 chainAilMel1,954 chainAilMel1,972 chainAilMel1,979 chainAilMel1,991 chainAilMel1,1000 chainAilMel1,1021 chainAilMel1,1061 chainCanFam2,18 chainCanFam2,37 chainCanFam2,59 chainCanFam2,71 chainCanFam2,117 chainCanFam2,130 chainCanFam2,147 chainCanFam2,154 chainCanFam2,200 chainCanFam2,203 chainCanFam2,229 chainCanFam2,239 chainCanFam2,244 chainCanFam2,252 chainCanFam2,260 chainCanFam2,264 chainCanFam2,273 chainCanFam2,290 chainCanFam2,299 chainCanFam2,313 chainCanFam2,328 chainCanFam2,334 chainCanFam2,337 chainCanFam2,352 chainCanFam2,358 chainCanFam2,362 chainCanFam2,382 chainCanFam2,388 chainCanFam2,402 chainCanFam2,420 chainCanFam2,437 chainCanFam2,440 chainCanFam2,445 chainCanFam2,458 chainCanFam2,471 chainCanFam2,473 chainCanFam2,480 chainCanFam2,483 chainCanFam2,490 chainCanFam2,496 chainCanFam2,509 chainCanFam2,520 chainCanFam2,524 chainCanFam2,527 chainCanFam2,535 chainCanFam2,539 chainCanFam2,545 chainCanFam2,556 chainCanFam2,559 chainCanFam2,571 chainCanFam2,578 chainCanFam2,580 chainCanFam2,588 chainCanFam2,594 chainCanFam2,603 chainCanFam2,606 chainCanFam2,636 chainCanFam2,641 chainCanFam2,650 chainCanFam2,654 chainCanFam2,661 chainCanFam2,684 chainCanFam2,692 chainCanFam2,762 chainCanFam2,766 chainCanFam2,774 chainCanFam2,778 chainCanFam2,782 chainCanFam2,790 chainCanFam2,835 chainCanFam2,845 chainCanFam2,864 chainCanFam2,867 chainCanFam2,879 chainCanFam2,903 chainCanFam2,945 chainCanFam2,951 chainCanFam2,969 chainCanFam2,976 chainCanFam2,988 chainCanFam2,997 chainCanFam2,1018 chainCanFam2,1058 chainHg19,18 chainHg19,37 chainHg19,59 chainHg19,71 chainHg19,117 chainHg19,130 chainHg19,147 chainHg19,154 chainHg19,200 chainHg19,203 chainHg19,229 chainHg19,239 chainHg19,244 chainHg19,252 chainHg19,260 chainHg19,264 chainHg19,273 chainHg19,290 chainHg19,299 chainHg19,313 chainHg19,328 chainHg19,334 chainHg19,337 chainHg19,352 chainHg19,358 chainHg19,362 chainHg19,382 chainHg19,388 chainHg19,402 chainHg19,420 chainHg19,437 chainHg19,440 chainHg19,445 chainHg19,458 chainHg19,471 chainHg19,473 chainHg19,480 chainHg19,483 chainHg19,490 chainHg19,496 chainHg19,509 chainHg19,520 chainHg19,524 chainHg19,527 chainHg19,535 chainHg19,539 chainHg19,545 chainHg19,556 chainHg19,559 chainHg19,571 chainHg19,578 chainHg19,580 chainHg19,588 chainHg19,594 chainHg19,603 chainHg19,606 chainHg19,636 chainHg19,641 chainHg19,650 chainHg19,654 chainHg19,661 chainHg19,684 chainHg19,692 chainHg19,762 chainHg19,766 chainHg19,774 chainHg19,778 chainHg19,782 chainHg19,790 chainHg19,835 chainHg19,845 chainHg19,864 chainHg19,867 chainHg19,879 chainHg19,903 chainHg19,945 chainHg19,951 chainHg19,969 chainHg19,976 chainHg19,988 chainHg19,997 chainHg19,1018 chainHg19,1058 chainMm9,18 chainMm9,37 chainMm9,59 chainMm9,71 chainMm9,117 chainMm9,130 chainMm9,147 chainMm9,154 chainMm9,200 chainMm9,203 chainMm9,229 chainMm9,239 chainMm9,244 chainMm9,252 chainMm9,260 chainMm9,264 chainMm9,273 chainMm9,290 chainMm9,299 chainMm9,313 chainMm9,328 chainMm9,334 chainMm9,337 chainMm9,352 chainMm9,358 chainMm9,362 chainMm9,382 chainMm9,388 chainMm9,402 chainMm9,420 chainMm9,437 chainMm9,440 chainMm9,445 chainMm9,458 chainMm9,471 chainMm9,473 chainMm9,480 chainMm9,483 chainMm9,490 chainMm9,496 chainMm9,509 chainMm9,520 chainMm9,524 chainMm9,527 chainMm9,535 chainMm9,539 chainMm9,545 chainMm9,556 chainMm9,559 chainMm9,571 chainMm9,578 chainMm9,580 chainMm9,588 chainMm9,594 chainMm9,603 chainMm9,606 chainMm9,636 chainMm9,641 chainMm9,650 chainMm9,654 chainMm9,661 chainMm9,684 chainMm9,692 chainMm9,762 chainMm9,766 chainMm9,774 chainMm9,778 chainMm9,782 chainMm9,790 chainMm9,835 chainMm9,845 chainMm9,864 chainMm9,867 chainMm9,879 chainMm9,903 chainMm9,945 chainMm9,951 chainMm9,969 chainMm9,976 chainMm9,988 chainMm9,997 chainMm9,1018 chainMm9,1058 chainMonDom5,18 chainMonDom5,37 chainMonDom5,59 chainMonDom5,71 chainMonDom5,117 chainMonDom5,130 chainMonDom5,147 chainMonDom5,154 chainMonDom5,200 chainMonDom5,203 chainMonDom5,229 chainMonDom5,239 chainMonDom5,244 chainMonDom5,252 chainMonDom5,260 chainMonDom5,264 chainMonDom5,273 chainMonDom5,290 chainMonDom5,299 chainMonDom5,313 chainMonDom5,328 chainMonDom5,334 chainMonDom5,337 chainMonDom5,352 chainMonDom5,358 chainMonDom5,362 chainMonDom5,382 chainMonDom5,388 chainMonDom5,402 chainMonDom5,420 chainMonDom5,437 chainMonDom5,440 chainMonDom5,445 chainMonDom5,458 chainMonDom5,471 chainMonDom5,473 chainMonDom5,480 chainMonDom5,483 chainMonDom5,490 chainMonDom5,496 chainMonDom5,509 chainMonDom5,520 chainMonDom5,524 chainMonDom5,527 chainMonDom5,535 chainMonDom5,539 chainMonDom5,545 chainMonDom5,556 chainMonDom5,559 chainMonDom5,571 chainMonDom5,578 chainMonDom5,580 chainMonDom5,588 chainMonDom5,594 chainMonDom5,603 chainMonDom5,606 chainMonDom5,636 chainMonDom5,641 chainMonDom5,650 chainMonDom5,654 chainMonDom5,661 chainMonDom5,684 chainMonDom5,692 chainMonDom5,762 chainMonDom5,766 chainMonDom5,774 chainMonDom5,778 chainMonDom5,782 chainMonDom5,790 chainMonDom5,835 chainMonDom5,845 chainMonDom5,864 chainMonDom5,867 chainMonDom5,879 chainMonDom5,903 chainMonDom5,945 chainMonDom5,951 chainMonDom5,969 chainMonDom5,976 chainMonDom5,988 chainMonDom5,997 chainMonDom5,1018 chainMonDom5,1058 chainNetAilMel1,22 chainNetAilMel1,41 chainNetAilMel1,63 chainNetAilMel1,76 chainNetAilMel1,122 chainNetAilMel1,135 chainNetAilMel1,152 chainNetAilMel1,159 chainNetAilMel1,205 chainNetAilMel1,208 chainNetAilMel1,234 chainNetAilMel1,244 chainNetAilMel1,249 chainNetAilMel1,257 chainNetAilMel1,265 chainNetAilMel1,269 chainNetAilMel1,278 chainNetAilMel1,295 chainNetAilMel1,304 chainNetAilMel1,319 chainNetAilMel1,334 chainNetAilMel1,340 chainNetAilMel1,343 chainNetAilMel1,358 chainNetAilMel1,364 chainNetAilMel1,368 chainNetAilMel1,388 chainNetAilMel1,394 chainNetAilMel1,408 chainNetAilMel1,426 chainNetAilMel1,443 chainNetAilMel1,446 chainNetAilMel1,451 chainNetAilMel1,464 chainNetAilMel1,477 chainNetAilMel1,479 chainNetAilMel1,486 chainNetAilMel1,489 chainNetAilMel1,496 chainNetAilMel1,502 chainNetAilMel1,515 chainNetAilMel1,526 chainNetAilMel1,530 chainNetAilMel1,533 chainNetAilMel1,541 chainNetAilMel1,545 chainNetAilMel1,551 chainNetAilMel1,562 chainNetAilMel1,565 chainNetAilMel1,577 chainNetAilMel1,584 chainNetAilMel1,586 chainNetAilMel1,594 chainNetAilMel1,600 chainNetAilMel1,609 chainNetAilMel1,612 chainNetAilMel1,642 chainNetAilMel1,647 chainNetAilMel1,656 chainNetAilMel1,660 chainNetAilMel1,667 chainNetAilMel1,690 chainNetAilMel1,698 chainNetAilMel1,768 chainNetAilMel1,772 chainNetAilMel1,780 chainNetAilMel1,784 chainNetAilMel1,788 chainNetAilMel1,796 chainNetAilMel1,841 chainNetAilMel1,851 chainNetAilMel1,870 chainNetAilMel1,873 chainNetAilMel1,885 chainNetAilMel1,909 chainNetAilMel1,951 chainNetAilMel1,957 chainNetAilMel1,975 chainNetAilMel1,982 chainNetAilMel1,994 chainNetAilMel1,1003 chainNetAilMel1,1024 chainNetAilMel1,1064 chainNetCanFam2,21 chainNetCanFam2,40 chainNetCanFam2,62 chainNetCanFam2,74 chainNetCanFam2,120 chainNetCanFam2,133 chainNetCanFam2,150 chainNetCanFam2,157 chainNetCanFam2,203 chainNetCanFam2,206 chainNetCanFam2,232 chainNetCanFam2,242 chainNetCanFam2,247 chainNetCanFam2,255 chainNetCanFam2,263 chainNetCanFam2,267 chainNetCanFam2,276 chainNetCanFam2,293 chainNetCanFam2,302 chainNetCanFam2,316 chainNetCanFam2,331 chainNetCanFam2,337 chainNetCanFam2,340 chainNetCanFam2,355 chainNetCanFam2,361 chainNetCanFam2,365 chainNetCanFam2,385 chainNetCanFam2,391 chainNetCanFam2,405 chainNetCanFam2,423 chainNetCanFam2,440 chainNetCanFam2,443 chainNetCanFam2,448 chainNetCanFam2,461 chainNetCanFam2,474 chainNetCanFam2,476 chainNetCanFam2,483 chainNetCanFam2,486 chainNetCanFam2,493 chainNetCanFam2,499 chainNetCanFam2,512 chainNetCanFam2,523 chainNetCanFam2,527 chainNetCanFam2,530 chainNetCanFam2,538 chainNetCanFam2,542 chainNetCanFam2,548 chainNetCanFam2,559 chainNetCanFam2,562 chainNetCanFam2,574 chainNetCanFam2,581 chainNetCanFam2,583 chainNetCanFam2,591 chainNetCanFam2,597 chainNetCanFam2,606 chainNetCanFam2,609 chainNetCanFam2,639 chainNetCanFam2,644 chainNetCanFam2,653 chainNetCanFam2,657 chainNetCanFam2,664 chainNetCanFam2,687 chainNetCanFam2,695 chainNetCanFam2,765 chainNetCanFam2,769 chainNetCanFam2,777 chainNetCanFam2,781 chainNetCanFam2,785 chainNetCanFam2,793 chainNetCanFam2,838 chainNetCanFam2,848 chainNetCanFam2,867 chainNetCanFam2,870 chainNetCanFam2,882 chainNetCanFam2,906 chainNetCanFam2,948 chainNetCanFam2,954 chainNetCanFam2,972 chainNetCanFam2,979 chainNetCanFam2,991 chainNetCanFam2,1000 chainNetCanFam2,1021 chainNetCanFam2,1061 chainNetHg19,21 chainNetHg19,40 chainNetHg19,62 chainNetHg19,74 chainNetHg19,120 chainNetHg19,133 chainNetHg19,150 chainNetHg19,157 chainNetHg19,203 chainNetHg19,206 chainNetHg19,232 chainNetHg19,242 chainNetHg19,247 chainNetHg19,255 chainNetHg19,263 chainNetHg19,267 chainNetHg19,276 chainNetHg19,293 chainNetHg19,302 chainNetHg19,316 chainNetHg19,331 chainNetHg19,337 chainNetHg19,340 chainNetHg19,355 chainNetHg19,361 chainNetHg19,365 chainNetHg19,385 chainNetHg19,391 chainNetHg19,405 chainNetHg19,423 chainNetHg19,440 chainNetHg19,443 chainNetHg19,448 chainNetHg19,461 chainNetHg19,474 chainNetHg19,476 chainNetHg19,483 chainNetHg19,486 chainNetHg19,493 chainNetHg19,499 chainNetHg19,512 chainNetHg19,523 chainNetHg19,527 chainNetHg19,530 chainNetHg19,538 chainNetHg19,542 chainNetHg19,548 chainNetHg19,559 chainNetHg19,562 chainNetHg19,574 chainNetHg19,581 chainNetHg19,583 chainNetHg19,591 chainNetHg19,597 chainNetHg19,606 chainNetHg19,609 chainNetHg19,639 chainNetHg19,644 chainNetHg19,653 chainNetHg19,657 chainNetHg19,664 chainNetHg19,687 chainNetHg19,695 chainNetHg19,765 chainNetHg19,769 chainNetHg19,777 chainNetHg19,781 chainNetHg19,785 chainNetHg19,793 chainNetHg19,838 chainNetHg19,848 chainNetHg19,867 chainNetHg19,870 chainNetHg19,882 chainNetHg19,906 chainNetHg19,948 chainNetHg19,954 chainNetHg19,972 chainNetHg19,979 chainNetHg19,991 chainNetHg19,1000 chainNetHg19,1021 chainNetHg19,1061 chainNetMm9,21 chainNetMm9,40 chainNetMm9,62 chainNetMm9,74 chainNetMm9,120 chainNetMm9,133 chainNetMm9,150 chainNetMm9,157 chainNetMm9,203 chainNetMm9,206 chainNetMm9,232 chainNetMm9,242 chainNetMm9,247 chainNetMm9,255 chainNetMm9,263 chainNetMm9,267 chainNetMm9,276 chainNetMm9,293 chainNetMm9,302 chainNetMm9,316 chainNetMm9,331 chainNetMm9,337 chainNetMm9,340 chainNetMm9,355 chainNetMm9,361 chainNetMm9,365 chainNetMm9,385 chainNetMm9,391 chainNetMm9,405 chainNetMm9,423 chainNetMm9,440 chainNetMm9,443 chainNetMm9,448 chainNetMm9,461 chainNetMm9,474 chainNetMm9,476 chainNetMm9,483 chainNetMm9,486 chainNetMm9,493 chainNetMm9,499 chainNetMm9,512 chainNetMm9,523 chainNetMm9,527 chainNetMm9,530 chainNetMm9,538 chainNetMm9,542 chainNetMm9,548 chainNetMm9,559 chainNetMm9,562 chainNetMm9,574 chainNetMm9,581 chainNetMm9,583 chainNetMm9,591 chainNetMm9,597 chainNetMm9,606 chainNetMm9,609 chainNetMm9,639 chainNetMm9,644 chainNetMm9,653 chainNetMm9,657 chainNetMm9,664 chainNetMm9,687 chainNetMm9,695 chainNetMm9,765 chainNetMm9,769 chainNetMm9,777 chainNetMm9,781 chainNetMm9,785 chainNetMm9,793 chainNetMm9,838 chainNetMm9,848 chainNetMm9,867 chainNetMm9,870 chainNetMm9,882 chainNetMm9,906 chainNetMm9,948 chainNetMm9,954 chainNetMm9,972 chainNetMm9,979 chainNetMm9,991 chainNetMm9,1000 chainNetMm9,1021 chainNetMm9,1061 chainNetMonDom5,21 chainNetMonDom5,40 chainNetMonDom5,62 chainNetMonDom5,74 chainNetMonDom5,120 chainNetMonDom5,133 chainNetMonDom5,150 chainNetMonDom5,157 chainNetMonDom5,203 chainNetMonDom5,206 chainNetMonDom5,232 chainNetMonDom5,242 chainNetMonDom5,247 chainNetMonDom5,255 chainNetMonDom5,263 chainNetMonDom5,267 chainNetMonDom5,276 chainNetMonDom5,293 chainNetMonDom5,302 chainNetMonDom5,316 chainNetMonDom5,331 chainNetMonDom5,337 chainNetMonDom5,340 chainNetMonDom5,355 chainNetMonDom5,361 chainNetMonDom5,365 chainNetMonDom5,385 chainNetMonDom5,391 chainNetMonDom5,405 chainNetMonDom5,423 chainNetMonDom5,440 chainNetMonDom5,443 chainNetMonDom5,448 chainNetMonDom5,461 chainNetMonDom5,474 chainNetMonDom5,476 chainNetMonDom5,483 chainNetMonDom5,486 chainNetMonDom5,493 chainNetMonDom5,499 chainNetMonDom5,512 chainNetMonDom5,523 chainNetMonDom5,527 chainNetMonDom5,530 chainNetMonDom5,538 chainNetMonDom5,542 chainNetMonDom5,548 chainNetMonDom5,559 chainNetMonDom5,562 chainNetMonDom5,574 chainNetMonDom5,581 chainNetMonDom5,583 chainNetMonDom5,591 chainNetMonDom5,597 chainNetMonDom5,606 chainNetMonDom5,609 chainNetMonDom5,639 chainNetMonDom5,644 chainNetMonDom5,653 chainNetMonDom5,657 chainNetMonDom5,664 chainNetMonDom5,687 chainNetMonDom5,695 chainNetMonDom5,765 chainNetMonDom5,769 chainNetMonDom5,777 chainNetMonDom5,781 chainNetMonDom5,785 chainNetMonDom5,793 chainNetMonDom5,838 chainNetMonDom5,848 chainNetMonDom5,867 chainNetMonDom5,870 chainNetMonDom5,882 chainNetMonDom5,906 chainNetMonDom5,948 chainNetMonDom5,954 chainNetMonDom5,972 chainNetMonDom5,979 chainNetMonDom5,991 chainNetMonDom5,1000 chainNetMonDom5,1021 chainNetMonDom5,1061 cons6way,31 cons6way,38 cons6way,49 cons6way,86 cons6way,98 cons6way,124 cons6way,132 cons6way,141 cons6way,150 cons6way,177 cons6way,231 cons6way,261 cons6way,265 cons6way,277 cons6way,311 cons6way,332 cons6way,341 cons6way,352 cons6way,361 cons6way,364 cons6way,386 cons6way,397 cons6way,406 cons6way,412 cons6way,428 cons6way,434 cons6way,450 cons6way,456 cons6way,519 cons6way,550 cons6way,555 cons6way,560 cons6way,587 cons6way,590 cons6way,593 cons6way,595 cons6way,611 cons6way,615 cons6way,624 cons6way,633 cons6way,639 cons6way,686 cons6way,693 cons6way,698 cons6way,706 cons6way,712 cons6way,713 cons6way,722 cons6way,729 cons6way,741 cons6way,745 cons6way,760 cons6way,768 cons6way,772 cons6way,782 cons6way,792 cons6way,796 cons6way,804 cons6way,808 cons6way,822 cons6way,837 cons6way,840 cons6way,854 cons6way,860 cons6way,863 cons6way,877 cons6way,884 cons6way,892 cons6way,896 cons6way,925 cons6way,933 cons6way,956 cons6way,971 cons6way,974 cons6way,988 cons6way,1000 cons6way,1012 cons6way,1015 cons6way,1018 cons6way,1024 cons6way,1029 cons6way,1033 cons6way,1038 cons6way,1047 cons6way,1057 cons6way,1059 cons6way,1062 cons6way,1067 cons6way,1072 cons6way,1102 cons6way,1116 cons6way,1121 cons6way,1125 cons6way,1131 cons6way,1134 cons6way,1140 cons6way,1146 cons6way,1152 cons6way,1165 cons6way,1168 cons6way,1172 cons6way,1186 cons6way,1191 cons6way,1212 cons6way,1245 cons6way,1251 cons6way,1257 cons6way,1264 cons6way,1269 cons6way,1275 cons6way,1283 cons6way,1320 cons6way,1355 cons6way,1361 cons6way,1381 cons6way,1389 cons6way,1406 cons6way,1417 cons6way,1421 cons6way,1426 cons6way,1438 cons6way,1447 cons6way,1464 cons6way,1467 cons6way,1513 cons6way,1534 cons6way,1546 cons6way,1556 cons6way,1566 cons6way,1570 cons6way,1588 cons6way,1592 cons6way,1598 cons6way,1611 cons6way,1629 cons6way,1641 cons6way,1650 cons6way,1679 cons6way,1686 cons6way,1690 cons6way,1697 cons6way,1701 cons6way,1706 cons6way,1712 cons6way,1721 cons6way,1735 cons6way,1744 cons6way,1793 cons6way,1807 cons6way,1847 cons6way,1857 cons6way,1863 cons6way,1892 cons6way,1901 cons6way,1905 cons6way,1911 cons6way,1921 cons6way,1925 cons6way,1940 cons6way,1948 cons6way,1951 cons6way,1968 cons6way,1977 cons6way,1983 cons6way,1991 cons6way,1999 cons6way,2004 cons6way,2007 cons6way,2024 cons6way,2043 cons6way,2082 cons6way,2133 cons6way,2147 cons6way,2287 cons6way,2322 cons6way,2372 cons6way,2482 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 ctgPos2,11 ctgPos2,14 ctgPos2,18 est,24 est,50 est,61 est,73 est,77 est,80 est,83 est,86 est,95 est,100 est,108 est,123 est,127 est,137 est,149 est,159 est,164 est,174 est,179 est,186 est,197 est,200 est,203 est,208 est,218 est,221 est,227 est,237 est,244 est,253 est,274 est,284 est,316 est,323 est,337 est,346 est,354 est,363 est,372 est,389 est,396 est,405 est,416 est,437 est,460 est,474 est,488 est,499 est,505 est,515 est,519 est,530 est,534 est,541 est,550 est,554 est,564 est,584 est,610 est,616 est,650 est,656 est,688 est,691 est,707 est,716 est,734 est,800 gap,13 gap,29 gap,38 gap,49 gap,62 gap,68 gap,74 gap,94 gap,98 gap,103 gap,133 gap,148 gap,156 gap,162 gc5Base,12 gc5Base,17 gc5Base,53 gc5Base,57 gc5Base,68 gc5Base,72 gold,12 gold,28 gold,31 gold,54 gold,80 gold,85 gold,94 gold,111 gold,116 gold,122 gold,136 gold,141 intronEst,26 intronEst,36 intronEst,71 intronEst,94 intronEst,99 intronEst,106 intronEst,123 intronEst,134 intronEst,154 intronEst,158 intronEst,161 intronEst,164 intronEst,167 intronEst,176 intronEst,181 intronEst,189 intronEst,204 intronEst,208 intronEst,218 intronEst,230 intronEst,240 intronEst,245 intronEst,255 intronEst,260 intronEst,267 intronEst,278 intronEst,281 intronEst,284 intronEst,289 intronEst,299 intronEst,302 intronEst,308 intronEst,318 intronEst,325 intronEst,334 intronEst,355 intronEst,365 intronEst,397 intronEst,404 intronEst,418 intronEst,427 intronEst,435 intronEst,444 intronEst,453 intronEst,470 intronEst,477 intronEst,486 intronEst,497 intronEst,518 intronEst,541 intronEst,555 intronEst,569 intronEst,580 intronEst,586 intronEst,596 intronEst,600 intronEst,611 intronEst,615 intronEst,622 intronEst,631 intronEst,635 intronEst,645 intronEst,665 intronEst,691 intronEst,697 intronEst,731 intronEst,737 intronEst,769 intronEst,772 intronEst,788 intronEst,797 intronEst,818 intronEst,884 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,11 mrna,22 mrna,31 mrna,42 mrna,54 mrna,69 mrna,73 mrna,83 mrna,95 mrna,105 mrna,110 mrna,120 mrna,125 mrna,132 mrna,143 mrna,146 mrna,149 mrna,154 mrna,164 mrna,167 mrna,173 mrna,183 mrna,190 mrna,199 mrna,220 mrna,230 mrna,262 mrna,269 mrna,283 mrna,292 mrna,300 mrna,309 mrna,318 mrna,335 mrna,342 mrna,353 mrna,376 mrna,390 mrna,393 mrna,404 mrna,407 mrna,423 mrna,432 mrna,438 mrna,451 mrna,517 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netAilMel1,19 netAilMel1,38 netAilMel1,60 netAilMel1,73 netAilMel1,119 netAilMel1,132 netAilMel1,149 netAilMel1,156 netAilMel1,202 netAilMel1,205 netAilMel1,231 netAilMel1,241 netAilMel1,246 netAilMel1,254 netAilMel1,262 netAilMel1,266 netAilMel1,275 netAilMel1,292 netAilMel1,301 netAilMel1,316 netAilMel1,331 netAilMel1,337 netAilMel1,340 netAilMel1,355 netAilMel1,361 netAilMel1,365 netAilMel1,385 netAilMel1,391 netAilMel1,405 netAilMel1,423 netAilMel1,440 netAilMel1,443 netAilMel1,448 netAilMel1,461 netAilMel1,474 netAilMel1,476 netAilMel1,483 netAilMel1,486 netAilMel1,493 netAilMel1,499 netAilMel1,512 netAilMel1,523 netAilMel1,527 netAilMel1,530 netAilMel1,538 netAilMel1,542 netAilMel1,548 netAilMel1,559 netAilMel1,562 netAilMel1,574 netAilMel1,581 netAilMel1,583 netAilMel1,591 netAilMel1,597 netAilMel1,606 netAilMel1,609 netAilMel1,639 netAilMel1,644 netAilMel1,653 netAilMel1,657 netAilMel1,664 netAilMel1,687 netAilMel1,695 netAilMel1,765 netAilMel1,769 netAilMel1,777 netAilMel1,781 netAilMel1,785 netAilMel1,793 netAilMel1,838 netAilMel1,848 netAilMel1,867 netAilMel1,870 netAilMel1,882 netAilMel1,906 netAilMel1,948 netAilMel1,954 netAilMel1,972 netAilMel1,979 netAilMel1,991 netAilMel1,1000 netAilMel1,1021 netAilMel1,1061 netCanFam2,18 netCanFam2,37 netCanFam2,59 netCanFam2,71 netCanFam2,117 netCanFam2,130 netCanFam2,147 netCanFam2,154 netCanFam2,200 netCanFam2,203 netCanFam2,229 netCanFam2,239 netCanFam2,244 netCanFam2,252 netCanFam2,260 netCanFam2,264 netCanFam2,273 netCanFam2,290 netCanFam2,299 netCanFam2,313 netCanFam2,328 netCanFam2,334 netCanFam2,337 netCanFam2,352 netCanFam2,358 netCanFam2,362 netCanFam2,382 netCanFam2,388 netCanFam2,402 netCanFam2,420 netCanFam2,437 netCanFam2,440 netCanFam2,445 netCanFam2,458 netCanFam2,471 netCanFam2,473 netCanFam2,480 netCanFam2,483 netCanFam2,490 netCanFam2,496 netCanFam2,509 netCanFam2,520 netCanFam2,524 netCanFam2,527 netCanFam2,535 netCanFam2,539 netCanFam2,545 netCanFam2,556 netCanFam2,559 netCanFam2,571 netCanFam2,578 netCanFam2,580 netCanFam2,588 netCanFam2,594 netCanFam2,603 netCanFam2,606 netCanFam2,636 netCanFam2,641 netCanFam2,650 netCanFam2,654 netCanFam2,661 netCanFam2,684 netCanFam2,692 netCanFam2,762 netCanFam2,766 netCanFam2,774 netCanFam2,778 netCanFam2,782 netCanFam2,790 netCanFam2,835 netCanFam2,845 netCanFam2,864 netCanFam2,867 netCanFam2,879 netCanFam2,903 netCanFam2,945 netCanFam2,951 netCanFam2,969 netCanFam2,976 netCanFam2,988 netCanFam2,997 netCanFam2,1018 netCanFam2,1058 netHg19,18 netHg19,37 netHg19,59 netHg19,71 netHg19,117 netHg19,130 netHg19,147 netHg19,154 netHg19,200 netHg19,203 netHg19,229 netHg19,239 netHg19,244 netHg19,252 netHg19,260 netHg19,264 netHg19,273 netHg19,290 netHg19,299 netHg19,313 netHg19,328 netHg19,334 netHg19,337 netHg19,352 netHg19,358 netHg19,362 netHg19,382 netHg19,388 netHg19,402 netHg19,420 netHg19,437 netHg19,440 netHg19,445 netHg19,458 netHg19,471 netHg19,473 netHg19,480 netHg19,483 netHg19,490 netHg19,496 netHg19,509 netHg19,520 netHg19,524 netHg19,527 netHg19,535 netHg19,539 netHg19,545 netHg19,556 netHg19,559 netHg19,571 netHg19,578 netHg19,580 netHg19,588 netHg19,594 netHg19,603 netHg19,606 netHg19,636 netHg19,641 netHg19,650 netHg19,654 netHg19,661 netHg19,684 netHg19,692 netHg19,762 netHg19,766 netHg19,774 netHg19,778 netHg19,782 netHg19,790 netHg19,835 netHg19,845 netHg19,864 netHg19,867 netHg19,879 netHg19,903 netHg19,945 netHg19,951 netHg19,969 netHg19,976 netHg19,988 netHg19,997 netHg19,1018 netHg19,1058 netMm9,18 netMm9,37 netMm9,59 netMm9,71 netMm9,117 netMm9,130 netMm9,147 netMm9,154 netMm9,200 netMm9,203 netMm9,229 netMm9,239 netMm9,244 netMm9,252 netMm9,260 netMm9,264 netMm9,273 netMm9,290 netMm9,299 netMm9,313 netMm9,328 netMm9,334 netMm9,337 netMm9,352 netMm9,358 netMm9,362 netMm9,382 netMm9,388 netMm9,402 netMm9,420 netMm9,437 netMm9,440 netMm9,445 netMm9,458 netMm9,471 netMm9,473 netMm9,480 netMm9,483 netMm9,490 netMm9,496 netMm9,509 netMm9,520 netMm9,524 netMm9,527 netMm9,535 netMm9,539 netMm9,545 netMm9,556 netMm9,559 netMm9,571 netMm9,578 netMm9,580 netMm9,588 netMm9,594 netMm9,603 netMm9,606 netMm9,636 netMm9,641 netMm9,650 netMm9,654 netMm9,661 netMm9,684 netMm9,692 netMm9,762 netMm9,766 netMm9,774 netMm9,778 netMm9,782 netMm9,790 netMm9,835 netMm9,845 netMm9,864 netMm9,867 netMm9,879 netMm9,903 netMm9,945 netMm9,951 netMm9,969 netMm9,976 netMm9,988 netMm9,997 netMm9,1018 netMm9,1058 netMonDom5,18 netMonDom5,37 netMonDom5,59 netMonDom5,71 netMonDom5,117 netMonDom5,130 netMonDom5,147 netMonDom5,154 netMonDom5,200 netMonDom5,203 netMonDom5,229 netMonDom5,239 netMonDom5,244 netMonDom5,252 netMonDom5,260 netMonDom5,264 netMonDom5,273 netMonDom5,290 netMonDom5,299 netMonDom5,313 netMonDom5,328 netMonDom5,334 netMonDom5,337 netMonDom5,352 netMonDom5,358 netMonDom5,362 netMonDom5,382 netMonDom5,388 netMonDom5,402 netMonDom5,420 netMonDom5,437 netMonDom5,440 netMonDom5,445 netMonDom5,458 netMonDom5,471 netMonDom5,473 netMonDom5,480 netMonDom5,483 netMonDom5,490 netMonDom5,496 netMonDom5,509 netMonDom5,520 netMonDom5,524 netMonDom5,527 netMonDom5,535 netMonDom5,539 netMonDom5,545 netMonDom5,556 netMonDom5,559 netMonDom5,571 netMonDom5,578 netMonDom5,580 netMonDom5,588 netMonDom5,594 netMonDom5,603 netMonDom5,606 netMonDom5,636 netMonDom5,641 netMonDom5,650 netMonDom5,654 netMonDom5,661 netMonDom5,684 netMonDom5,692 netMonDom5,762 netMonDom5,766 netMonDom5,774 netMonDom5,778 netMonDom5,782 netMonDom5,790 netMonDom5,835 netMonDom5,845 netMonDom5,864 netMonDom5,867 netMonDom5,879 netMonDom5,903 netMonDom5,945 netMonDom5,951 netMonDom5,969 netMonDom5,976 netMonDom5,988 netMonDom5,997 netMonDom5,1018 netMonDom5,1058 nscanGene,16 nscanGene,24 nscanGene,42 nscanGene,61 nscanGene,85 nscanGene,89 nscanGene,105 nscanGene,138 nscanGene,199 refGene,10 refGene,23 refGene,30 refGene,40 refGene,67 refGene,82 refGene,89 refGene,93 refGene,97 refGene,108 refGene,123 refGene,126 refGene,129 refGene,143 refGene,149 refGene,154 refGene,159 refGene,167 refGene,195 refGene,200 refGene,215 refGene,230 refGene,243 refGene,255 refGene,278 refGene,281 refGene,297 refGene,306 refGene,329 refGene,337 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 simpleRepeat,60 tRNAs,52 tRNAs,114 tRNAs,139 tRNAs,156 tRNAs,204 tRNAs,216 tRNAs,246 tRNAs,317 tRNAs,321 tRNAs,336 tRNAs,363 xenoRefGene,26 xenoRefGene,33 xenoRefGene,48 xenoRefGene,55 xenoRefGene,59 xenoRefGene,63 xenoRefGene,74 xenoRefGene,89 xenoRefGene,92 xenoRefGene,95 xenoRefGene,109 xenoRefGene,115 xenoRefGene,120 xenoRefGene,125 xenoRefGene,133 xenoRefGene,161 xenoRefGene,166 xenoRefGene,181 xenoRefGene,196 xenoRefGene,209 xenoRefGene,216 xenoRefGene,221 xenoRefGene,244 xenoRefGene,247 xenoRefGene,263 xenoRefGene,272 xenoRefGene,295 their cons6way,127 nestedRepeats,190 them chainAilMel1,800 chainCanFam2,797 chainHg19,797 chainMm9,797 chainMonDom5,797 chainNetAilMel1,803 chainNetCanFam2,800 chainNetHg19,800 chainNetMm9,800 chainNetMonDom5,800 cons6way,446 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netAilMel1,800 netCanFam2,797 netHg19,797 netMm9,797 netMonDom5,797 rmsk,318 tRNAs,280 then chainAilMel1,650 chainAilMel1,789 chainAilMel1,874 chainCanFam2,647 chainCanFam2,786 chainCanFam2,871 chainHg19,647 chainHg19,786 chainHg19,871 chainMm9,647 chainMm9,786 chainMm9,871 chainMonDom5,647 chainMonDom5,786 chainMonDom5,871 chainNetAilMel1,653 chainNetAilMel1,792 chainNetAilMel1,877 chainNetCanFam2,650 chainNetCanFam2,789 chainNetCanFam2,874 chainNetHg19,650 chainNetHg19,789 chainNetHg19,874 chainNetMm9,650 chainNetMm9,789 chainNetMm9,874 chainNetMonDom5,650 chainNetMonDom5,789 chainNetMonDom5,874 cons6way,738 cons6way,1136 cons6way,1337 cons6way,1386 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 netAilMel1,650 netAilMel1,789 netAilMel1,874 netCanFam2,647 netCanFam2,786 netCanFam2,871 netHg19,647 netHg19,786 netHg19,871 netMm9,647 netMm9,786 netMm9,871 netMonDom5,647 netMonDom5,786 netMonDom5,871 tRNAs,54 there cons6way,1052 cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 est,619 intronEst,700 therefore cons6way,168 cons6way,1767 gold,130 these augustusGene,95 augustusGene,190 chainAilMel1,53 chainAilMel1,102 chainAilMel1,410 chainAilMel1,662 chainCanFam2,52 chainCanFam2,100 chainCanFam2,407 chainCanFam2,659 chainHg19,52 chainHg19,100 chainHg19,407 chainHg19,659 chainMm9,52 chainMm9,100 chainMm9,407 chainMm9,659 chainMonDom5,52 chainMonDom5,100 chainMonDom5,407 chainMonDom5,659 chainNetAilMel1,56 chainNetAilMel1,105 chainNetAilMel1,413 chainNetAilMel1,665 chainNetCanFam2,55 chainNetCanFam2,103 chainNetCanFam2,410 chainNetCanFam2,662 chainNetHg19,55 chainNetHg19,103 chainNetHg19,410 chainNetHg19,662 chainNetMm9,55 chainNetMm9,103 chainNetMm9,410 chainNetMm9,662 chainNetMonDom5,55 chainNetMonDom5,103 chainNetMonDom5,410 chainNetMonDom5,662 cons6way,1703 est,587 gap,34 gap,124 gap,140 intronEst,668 microsat,24 nestedRepeats,262 nestedRepeats,266 netAilMel1,53 netAilMel1,102 netAilMel1,410 netAilMel1,662 netCanFam2,52 netCanFam2,100 netCanFam2,407 netCanFam2,659 netHg19,52 netHg19,100 netHg19,407 netHg19,659 netMm9,52 netMm9,100 netMm9,407 netMm9,659 netMonDom5,52 netMonDom5,100 netMonDom5,407 netMonDom5,659 rmsk,235 simpleRepeat,33 tRNAs,56 tRNAs,223 tRNAs,257 tRNAs,303 tRNAs,359 thesis chainAilMel1,1020 chainCanFam2,1017 chainHg19,1017 chainMm9,1017 chainMonDom5,1017 chainNetAilMel1,1023 chainNetCanFam2,1020 chainNetHg19,1020 chainNetMm9,1020 chainNetMonDom5,1020 cons6way,2417 netAilMel1,1020 netCanFam2,1017 netHg19,1017 netMm9,1017 netMonDom5,1017 they chainAilMel1,327 chainCanFam2,324 chainHg19,324 chainMm9,324 chainMonDom5,324 chainNetAilMel1,330 chainNetCanFam2,327 chainNetHg19,327 chainNetMm9,327 chainNetMonDom5,327 netAilMel1,327 netCanFam2,324 netHg19,324 netMm9,324 netMonDom5,324 tRNAs,188 tRNAs,267 thibaud-nissen refGene,358 xenoRefGene,323 thick chainAilMel1,44 chainCanFam2,43 chainHg19,43 chainMm9,43 chainMonDom5,43 chainNetAilMel1,47 chainNetCanFam2,46 chainNetHg19,46 chainNetMm9,46 chainNetMonDom5,46 netAilMel1,44 netCanFam2,43 netHg19,43 netMm9,43 netMonDom5,43 third cons6way,196 this augustusGene,13 augustusGene,106 augustusGene,224 blastHg18KG,14 blastHg18KG,189 chainAilMel1,14 chainAilMel1,172 chainAilMel1,297 chainAilMel1,397 chainAilMel1,693 chainAilMel1,815 chainCanFam2,13 chainCanFam2,170 chainCanFam2,295 chainCanFam2,394 chainCanFam2,690 chainCanFam2,812 chainHg19,13 chainHg19,170 chainHg19,295 chainHg19,394 chainHg19,690 chainHg19,812 chainMm9,13 chainMm9,170 chainMm9,295 chainMm9,394 chainMm9,690 chainMm9,812 chainMonDom5,13 chainMonDom5,170 chainMonDom5,295 chainMonDom5,394 chainMonDom5,690 chainMonDom5,812 chainNetAilMel1,17 chainNetAilMel1,175 chainNetAilMel1,300 chainNetAilMel1,400 chainNetAilMel1,696 chainNetAilMel1,818 chainNetCanFam2,16 chainNetCanFam2,173 chainNetCanFam2,298 chainNetCanFam2,397 chainNetCanFam2,693 chainNetCanFam2,815 chainNetHg19,16 chainNetHg19,173 chainNetHg19,298 chainNetHg19,397 chainNetHg19,693 chainNetHg19,815 chainNetMm9,16 chainNetMm9,173 chainNetMm9,298 chainNetMm9,397 chainNetMm9,693 chainNetMm9,815 chainNetMonDom5,16 chainNetMonDom5,173 chainNetMonDom5,298 chainNetMonDom5,397 chainNetMonDom5,693 chainNetMonDom5,815 cons6way,10 cons6way,67 cons6way,527 cons6way,1113 cons6way,1561 cons6way,1643 cons6way,1956 cons6way,2019 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 ctgPos2,8 ctgPos2,28 est,11 est,47 est,112 est,139 est,375 est,412 est,592 est,628 est,641 est,722 gap,8 gap,59 gap,100 gc5Base,38 gc5Base,77 gold,9 gold,77 gold,145 intronEst,13 intronEst,131 intronEst,193 intronEst,220 intronEst,456 intronEst,493 intronEst,673 intronEst,709 intronEst,722 intronEst,803 intronEst,806 microsat,11 microsat,50 microsat,99 mrna,28 mrna,58 mrna,85 mrna,321 mrna,349 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netAilMel1,14 netAilMel1,172 netAilMel1,297 netAilMel1,397 netAilMel1,693 netAilMel1,815 netCanFam2,13 netCanFam2,170 netCanFam2,295 netCanFam2,394 netCanFam2,690 netCanFam2,812 netHg19,13 netHg19,170 netHg19,295 netHg19,394 netHg19,690 netHg19,812 netMm9,13 netMm9,170 netMm9,295 netMm9,394 netMm9,690 netMm9,812 netMonDom5,13 netMonDom5,170 netMonDom5,295 netMonDom5,394 netMonDom5,690 netMonDom5,812 nscanGene,10 nscanGene,125 nscanGene,130 refGene,33 refGene,79 refGene,117 refGene,172 refGene,211 refGene,247 refGene,312 rmsk,10 rmsk,51 rmsk,143 rmsk,344 simpleRepeat,12 simpleRepeat,31 tRNAs,14 tRNAs,134 xenoRefGene,11 xenoRefGene,36 xenoRefGene,45 xenoRefGene,83 xenoRefGene,138 xenoRefGene,177 xenoRefGene,213 xenoRefGene,278 those cons6way,1042 cons6way,1209 cons6way,1235 est,368 est,401 intronEst,449 intronEst,482 microsat,62 mrna,314 nestedRepeats,272 refGene,260 tRNAs,176 xenoRefGene,226 thousands chainAilMel1,252 chainCanFam2,250 chainHg19,250 chainMm9,250 chainMonDom5,250 chainNetAilMel1,255 chainNetCanFam2,253 chainNetHg19,253 chainNetMm9,253 chainNetMonDom5,253 netAilMel1,252 netCanFam2,250 netHg19,250 netMm9,250 netMonDom5,250 threaded cons6way,2373 three cons6way,335 through gap,93 nestedRepeats,97 refGene,122 rmsk,309 xenoRefGene,88 thus cons6way,323 time chainAilMel1,798 chainCanFam2,795 chainHg19,795 chainMm9,795 chainMonDom5,795 chainNetAilMel1,801 chainNetCanFam2,798 chainNetHg19,798 chainNetMm9,798 chainNetMonDom5,798 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netAilMel1,798 netCanFam2,795 netHg19,795 netMm9,795 netMonDom5,795 tissue est,204 est,239 est,254 intronEst,285 intronEst,320 intronEst,335 mrna,150 mrna,185 mrna,200 tissues est,247 intronEst,328 mrna,193 tm tRNAs,369 tRNAs,441 to augustusGene,115 augustusGene,170 augustusGene,249 augustusGene,301 blastHg18KG,56 blastHg18KG,187 chainAilMel1,24 chainAilMel1,72 chainAilMel1,145 chainAilMel1,213 chainAilMel1,225 chainAilMel1,318 chainAilMel1,329 chainAilMel1,334 chainAilMel1,346 chainAilMel1,352 chainAilMel1,375 chainAilMel1,456 chainAilMel1,470 chainAilMel1,554 chainAilMel1,655 chainAilMel1,791 chainAilMel1,803 chainAilMel1,843 chainAilMel1,866 chainAilMel1,876 chainCanFam2,23 chainCanFam2,70 chainCanFam2,143 chainCanFam2,211 chainCanFam2,223 chainCanFam2,315 chainCanFam2,326 chainCanFam2,331 chainCanFam2,343 chainCanFam2,349 chainCanFam2,372 chainCanFam2,453 chainCanFam2,467 chainCanFam2,551 chainCanFam2,652 chainCanFam2,788 chainCanFam2,800 chainCanFam2,840 chainCanFam2,863 chainCanFam2,873 chainHg19,23 chainHg19,70 chainHg19,143 chainHg19,211 chainHg19,223 chainHg19,315 chainHg19,326 chainHg19,331 chainHg19,343 chainHg19,349 chainHg19,372 chainHg19,453 chainHg19,467 chainHg19,551 chainHg19,652 chainHg19,788 chainHg19,800 chainHg19,840 chainHg19,863 chainHg19,873 chainMm9,23 chainMm9,70 chainMm9,143 chainMm9,211 chainMm9,223 chainMm9,315 chainMm9,326 chainMm9,331 chainMm9,343 chainMm9,349 chainMm9,372 chainMm9,453 chainMm9,467 chainMm9,551 chainMm9,652 chainMm9,788 chainMm9,800 chainMm9,840 chainMm9,863 chainMm9,873 chainMonDom5,23 chainMonDom5,70 chainMonDom5,143 chainMonDom5,211 chainMonDom5,223 chainMonDom5,315 chainMonDom5,326 chainMonDom5,331 chainMonDom5,343 chainMonDom5,349 chainMonDom5,372 chainMonDom5,453 chainMonDom5,467 chainMonDom5,551 chainMonDom5,652 chainMonDom5,788 chainMonDom5,800 chainMonDom5,840 chainMonDom5,863 chainMonDom5,873 chainNetAilMel1,27 chainNetAilMel1,75 chainNetAilMel1,148 chainNetAilMel1,216 chainNetAilMel1,228 chainNetAilMel1,321 chainNetAilMel1,332 chainNetAilMel1,337 chainNetAilMel1,349 chainNetAilMel1,355 chainNetAilMel1,378 chainNetAilMel1,459 chainNetAilMel1,473 chainNetAilMel1,557 chainNetAilMel1,658 chainNetAilMel1,794 chainNetAilMel1,806 chainNetAilMel1,846 chainNetAilMel1,869 chainNetAilMel1,879 chainNetCanFam2,26 chainNetCanFam2,73 chainNetCanFam2,146 chainNetCanFam2,214 chainNetCanFam2,226 chainNetCanFam2,318 chainNetCanFam2,329 chainNetCanFam2,334 chainNetCanFam2,346 chainNetCanFam2,352 chainNetCanFam2,375 chainNetCanFam2,456 chainNetCanFam2,470 chainNetCanFam2,554 chainNetCanFam2,655 chainNetCanFam2,791 chainNetCanFam2,803 chainNetCanFam2,843 chainNetCanFam2,866 chainNetCanFam2,876 chainNetHg19,26 chainNetHg19,73 chainNetHg19,146 chainNetHg19,214 chainNetHg19,226 chainNetHg19,318 chainNetHg19,329 chainNetHg19,334 chainNetHg19,346 chainNetHg19,352 chainNetHg19,375 chainNetHg19,456 chainNetHg19,470 chainNetHg19,554 chainNetHg19,655 chainNetHg19,791 chainNetHg19,803 chainNetHg19,843 chainNetHg19,866 chainNetHg19,876 chainNetMm9,26 chainNetMm9,73 chainNetMm9,146 chainNetMm9,214 chainNetMm9,226 chainNetMm9,318 chainNetMm9,329 chainNetMm9,334 chainNetMm9,346 chainNetMm9,352 chainNetMm9,375 chainNetMm9,456 chainNetMm9,470 chainNetMm9,554 chainNetMm9,655 chainNetMm9,791 chainNetMm9,803 chainNetMm9,843 chainNetMm9,866 chainNetMm9,876 chainNetMonDom5,26 chainNetMonDom5,73 chainNetMonDom5,146 chainNetMonDom5,214 chainNetMonDom5,226 chainNetMonDom5,318 chainNetMonDom5,329 chainNetMonDom5,334 chainNetMonDom5,346 chainNetMonDom5,352 chainNetMonDom5,375 chainNetMonDom5,456 chainNetMonDom5,470 chainNetMonDom5,554 chainNetMonDom5,655 chainNetMonDom5,791 chainNetMonDom5,803 chainNetMonDom5,843 chainNetMonDom5,866 chainNetMonDom5,876 cons6way,92 cons6way,161 cons6way,236 cons6way,250 cons6way,368 cons6way,557 cons6way,606 cons6way,632 cons6way,673 cons6way,695 cons6way,717 cons6way,732 cons6way,767 cons6way,787 cons6way,827 cons6way,869 cons6way,937 cons6way,993 cons6way,1011 cons6way,1046 cons6way,1111 cons6way,1175 cons6way,1183 cons6way,1397 cons6way,1443 cons6way,1452 cons6way,1495 cons6way,1507 cons6way,1604 cons6way,1649 cons6way,1731 cons6way,1738 cons6way,1834 cons6way,1916 cons6way,1935 cons6way,2014 cons6way,2169 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 est,94 est,121 est,158 est,162 est,177 est,184 est,188 est,206 est,226 est,233 est,332 est,381 est,391 est,415 est,436 est,445 est,514 est,579 est,639 est,733 gc5Base,48 gold,41 gold,53 gold,139 intronEst,55 intronEst,175 intronEst,202 intronEst,239 intronEst,243 intronEst,258 intronEst,265 intronEst,269 intronEst,287 intronEst,307 intronEst,314 intronEst,413 intronEst,462 intronEst,472 intronEst,496 intronEst,517 intronEst,526 intronEst,595 intronEst,660 intronEst,720 intronEst,817 microsat,18 microsat,38 microsat,121 mrna,67 mrna,104 mrna,108 mrna,123 mrna,130 mrna,134 mrna,152 mrna,172 mrna,179 mrna,278 mrna,327 mrna,337 mrna,352 mrna,375 mrna,450 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netAilMel1,24 netAilMel1,72 netAilMel1,145 netAilMel1,213 netAilMel1,225 netAilMel1,318 netAilMel1,329 netAilMel1,334 netAilMel1,346 netAilMel1,352 netAilMel1,375 netAilMel1,456 netAilMel1,470 netAilMel1,554 netAilMel1,655 netAilMel1,791 netAilMel1,803 netAilMel1,843 netAilMel1,866 netAilMel1,876 netCanFam2,23 netCanFam2,70 netCanFam2,143 netCanFam2,211 netCanFam2,223 netCanFam2,315 netCanFam2,326 netCanFam2,331 netCanFam2,343 netCanFam2,349 netCanFam2,372 netCanFam2,453 netCanFam2,467 netCanFam2,551 netCanFam2,652 netCanFam2,788 netCanFam2,800 netCanFam2,840 netCanFam2,863 netCanFam2,873 netHg19,23 netHg19,70 netHg19,143 netHg19,211 netHg19,223 netHg19,315 netHg19,326 netHg19,331 netHg19,343 netHg19,349 netHg19,372 netHg19,453 netHg19,467 netHg19,551 netHg19,652 netHg19,788 netHg19,800 netHg19,840 netHg19,863 netHg19,873 netMm9,23 netMm9,70 netMm9,143 netMm9,211 netMm9,223 netMm9,315 netMm9,326 netMm9,331 netMm9,343 netMm9,349 netMm9,372 netMm9,453 netMm9,467 netMm9,551 netMm9,652 netMm9,788 netMm9,800 netMm9,840 netMm9,863 netMm9,873 netMonDom5,23 netMonDom5,70 netMonDom5,143 netMonDom5,211 netMonDom5,223 netMonDom5,315 netMonDom5,326 netMonDom5,331 netMonDom5,343 netMonDom5,349 netMonDom5,372 netMonDom5,453 netMonDom5,467 netMonDom5,551 netMonDom5,652 netMonDom5,788 netMonDom5,800 netMonDom5,840 netMonDom5,863 netMonDom5,873 nscanGene,53 nscanGene,66 nscanGene,111 nscanGene,134 nscanGene,161 refGene,49 refGene,147 refGene,183 refGene,190 refGene,214 refGene,240 rmsk,147 rmsk,315 rmsk,327 rmsk,342 simpleRepeat,81 tRNAs,44 tRNAs,66 tRNAs,127 tRNAs,170 tRNAs,219 tRNAs,251 xenoRefGene,113 xenoRefGene,149 xenoRefGene,156 xenoRefGene,180 xenoRefGene,206 together blastHg18KG,87 chainAilMel1,125 chainCanFam2,123 chainHg19,123 chainMm9,123 chainMonDom5,123 chainNetAilMel1,128 chainNetCanFam2,126 chainNetHg19,126 chainNetMm9,126 chainNetMonDom5,126 netAilMel1,125 netCanFam2,123 netHg19,123 netMm9,123 netMonDom5,123 tolerate chainAilMel1,94 chainCanFam2,92 chainHg19,92 chainMm9,92 chainMonDom5,92 chainNetAilMel1,97 chainNetCanFam2,95 chainNetHg19,95 chainNetMm9,95 chainNetMonDom5,95 netAilMel1,94 netCanFam2,92 netHg19,92 netMm9,92 netMonDom5,92 tool blastHg18KG,145 blastHg18KG,167 est,803 intronEst,887 mrna,520 refGene,340 xenoRefGene,305 tools cons6way,47 cons6way,395 cons6way,2028 cons6way,2089 nestedRepeats,314 rmsk,337 top chainAilMel1,511 chainCanFam2,508 chainHg19,508 chainMm9,508 chainMonDom5,508 chainNetAilMel1,514 chainNetCanFam2,511 chainNetHg19,511 chainNetMm9,511 chainNetMonDom5,511 cons6way,1132 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netAilMel1,511 netCanFam2,508 netHg19,508 netMm9,508 netMonDom5,508 refGene,127 xenoRefGene,93 top-level chainAilMel1,386 chainAilMel1,406 chainCanFam2,383 chainCanFam2,403 chainHg19,383 chainHg19,403 chainMm9,383 chainMm9,403 chainMonDom5,383 chainMonDom5,403 chainNetAilMel1,389 chainNetAilMel1,409 chainNetCanFam2,386 chainNetCanFam2,406 chainNetHg19,386 chainNetHg19,406 chainNetMm9,386 chainNetMm9,406 chainNetMonDom5,386 chainNetMonDom5,406 netAilMel1,386 netAilMel1,406 netCanFam2,383 netCanFam2,403 netHg19,383 netHg19,403 netMm9,383 netMm9,403 netMonDom5,383 netMonDom5,403 topology cons6way,1440 cons6way,1536 town nscanGene,194 track augustusGene,14 augustusGene,107 blastHg18KG,15 blastHg18KG,34 blastHg18KG,45 blastHg18KG,190 chainAilMel1,15 chainAilMel1,59 chainAilMel1,62 chainAilMel1,121 chainAilMel1,261 chainAilMel1,264 chainAilMel1,313 chainAilMel1,348 chainAilMel1,380 chainAilMel1,567 chainAilMel1,694 chainAilMel1,757 chainCanFam2,14 chainCanFam2,58 chainCanFam2,61 chainCanFam2,119 chainCanFam2,259 chainCanFam2,262 chainCanFam2,310 chainCanFam2,345 chainCanFam2,377 chainCanFam2,564 chainCanFam2,691 chainCanFam2,754 chainHg19,14 chainHg19,58 chainHg19,61 chainHg19,119 chainHg19,259 chainHg19,262 chainHg19,310 chainHg19,345 chainHg19,377 chainHg19,564 chainHg19,691 chainHg19,754 chainMm9,14 chainMm9,58 chainMm9,61 chainMm9,119 chainMm9,259 chainMm9,262 chainMm9,310 chainMm9,345 chainMm9,377 chainMm9,564 chainMm9,691 chainMm9,754 chainMonDom5,14 chainMonDom5,58 chainMonDom5,61 chainMonDom5,119 chainMonDom5,259 chainMonDom5,262 chainMonDom5,310 chainMonDom5,345 chainMonDom5,377 chainMonDom5,564 chainMonDom5,691 chainMonDom5,754 chainNetAilMel1,18 chainNetAilMel1,62 chainNetAilMel1,65 chainNetAilMel1,124 chainNetAilMel1,264 chainNetAilMel1,267 chainNetAilMel1,316 chainNetAilMel1,351 chainNetAilMel1,383 chainNetAilMel1,570 chainNetAilMel1,697 chainNetAilMel1,760 chainNetCanFam2,17 chainNetCanFam2,61 chainNetCanFam2,64 chainNetCanFam2,122 chainNetCanFam2,262 chainNetCanFam2,265 chainNetCanFam2,313 chainNetCanFam2,348 chainNetCanFam2,380 chainNetCanFam2,567 chainNetCanFam2,694 chainNetCanFam2,757 chainNetHg19,17 chainNetHg19,61 chainNetHg19,64 chainNetHg19,122 chainNetHg19,262 chainNetHg19,265 chainNetHg19,313 chainNetHg19,348 chainNetHg19,380 chainNetHg19,567 chainNetHg19,694 chainNetHg19,757 chainNetMm9,17 chainNetMm9,61 chainNetMm9,64 chainNetMm9,122 chainNetMm9,262 chainNetMm9,265 chainNetMm9,313 chainNetMm9,348 chainNetMm9,380 chainNetMm9,567 chainNetMm9,694 chainNetMm9,757 chainNetMonDom5,17 chainNetMonDom5,61 chainNetMonDom5,64 chainNetMonDom5,122 chainNetMonDom5,262 chainNetMonDom5,265 chainNetMonDom5,313 chainNetMonDom5,348 chainNetMonDom5,380 chainNetMonDom5,567 chainNetMonDom5,694 chainNetMonDom5,757 cons6way,11 cons6way,68 cons6way,457 cons6way,522 cons6way,528 cons6way,551 cons6way,583 cons6way,687 cons6way,770 cons6way,1016 cons6way,1497 cons6way,1562 cons6way,1957 cons6way,2008 cons6way,2020 cons6way,2115 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 ctgPos2,9 ctgPos2,29 est,12 est,48 est,113 est,138 est,150 est,376 est,642 est,723 gap,9 gap,60 gc5Base,15 gc5Base,39 gold,10 gold,78 gold,146 intronEst,14 intronEst,126 intronEst,132 intronEst,194 intronEst,219 intronEst,231 intronEst,457 intronEst,723 intronEst,804 intronEst,807 microsat,12 microsat,51 microsat,59 microsat,87 mrna,13 mrna,29 mrna,59 mrna,84 mrna,96 mrna,322 mrna,440 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netAilMel1,15 netAilMel1,59 netAilMel1,62 netAilMel1,121 netAilMel1,261 netAilMel1,264 netAilMel1,313 netAilMel1,348 netAilMel1,380 netAilMel1,567 netAilMel1,694 netAilMel1,757 netCanFam2,14 netCanFam2,58 netCanFam2,61 netCanFam2,119 netCanFam2,259 netCanFam2,262 netCanFam2,310 netCanFam2,345 netCanFam2,377 netCanFam2,564 netCanFam2,691 netCanFam2,754 netHg19,14 netHg19,58 netHg19,61 netHg19,119 netHg19,259 netHg19,262 netHg19,310 netHg19,345 netHg19,377 netHg19,564 netHg19,691 netHg19,754 netMm9,14 netMm9,58 netMm9,61 netMm9,119 netMm9,259 netMm9,262 netMm9,310 netMm9,345 netMm9,377 netMm9,564 netMm9,691 netMm9,754 netMonDom5,14 netMonDom5,58 netMonDom5,61 netMonDom5,119 netMonDom5,259 netMonDom5,262 netMonDom5,310 netMonDom5,345 netMonDom5,377 netMonDom5,564 netMonDom5,691 netMonDom5,754 nscanGene,11 refGene,13 refGene,34 refGene,80 refGene,118 refGene,130 refGene,173 refGene,202 refGene,313 rmsk,11 rmsk,52 rmsk,144 rmsk,345 simpleRepeat,13 tRNAs,15 xenoRefGene,12 xenoRefGene,37 xenoRefGene,46 xenoRefGene,84 xenoRefGene,96 xenoRefGene,139 xenoRefGene,168 xenoRefGene,279 tracks augustusGene,41 chainAilMel1,771 chainCanFam2,768 chainHg19,768 chainMm9,768 chainMonDom5,768 chainNetAilMel1,774 chainNetCanFam2,771 chainNetHg19,771 chainNetMm9,771 chainNetMonDom5,771 cons6way,77 cons6way,1267 cons6way,1311 cons6way,1425 est,56 est,421 intronEst,140 intronEst,502 mrna,37 mrna,360 netAilMel1,771 netCanFam2,768 netHg19,768 netMm9,768 netMonDom5,768 refGene,70 refGene,88 xenoRefGene,54 trackspecies cons6way,1299 traditional chainAilMel1,86 chainCanFam2,84 chainHg19,84 chainMm9,84 chainMonDom5,84 chainNetAilMel1,89 chainNetCanFam2,87 chainNetHg19,87 chainNetMm9,87 chainNetMonDom5,87 netAilMel1,86 netCanFam2,84 netHg19,84 netMm9,84 netMonDom5,84 trained augustusGene,150 training augustusGene,162 augustusGene,176 augustusGene,180 augustusGene,199 augustusGene,228 augustusGene,243 augustusGene,259 augustusGene,273 transcribed est,41 est,456 intronEst,53 intronEst,537 transcript est,551 intronEst,632 nscanGene,205 transcriptase est,507 intronEst,588 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 est,98 est,490 est,537 est,559 intronEst,179 intronEst,571 intronEst,618 intronEst,640 transcriptional tRNAs,497 transcripts augustusGene,124 cons6way,1608 refGene,411 xenoRefGene,376 transfer tRNAs,3 tRNAs,374 tRNAs,451 transformed cons6way,1959 cons6way,1971 translate cons6way,1184 translated cons6way,1255 translation augustusGene,57 cons6way,1094 cons6way,1119 cons6way,1127 cons6way,1145 cons6way,1157 cons6way,1164 cons6way,1202 cons6way,1204 cons6way,1231 cons6way,1262 cons6way,1272 cons6way,1297 cons6way,1315 tRNAs,159 tRNAs,195 transposable nestedRepeats,379 rmsk,402 transposon cons6way,986 transposons chainAilMel1,568 chainAilMel1,592 chainAilMel1,901 chainCanFam2,565 chainCanFam2,589 chainCanFam2,898 chainHg19,565 chainHg19,589 chainHg19,898 chainMm9,565 chainMm9,589 chainMm9,898 chainMonDom5,565 chainMonDom5,589 chainMonDom5,898 chainNetAilMel1,571 chainNetAilMel1,595 chainNetAilMel1,904 chainNetCanFam2,568 chainNetCanFam2,592 chainNetCanFam2,901 chainNetHg19,568 chainNetHg19,592 chainNetHg19,901 chainNetMm9,568 chainNetMm9,592 chainNetMm9,901 chainNetMonDom5,568 chainNetMonDom5,592 chainNetMonDom5,901 netAilMel1,568 netAilMel1,592 netAilMel1,901 netCanFam2,565 netCanFam2,589 netCanFam2,898 netHg19,565 netHg19,589 netHg19,898 netMm9,565 netMm9,589 netMm9,898 netMonDom5,565 netMonDom5,589 netMonDom5,898 treat cons6way,297 tRNAs,279 tree cons6way,1439 cons6way,1518 cons6way,1531 cons6way,1535 cons6way,1558 cons6way,2106 cons6way,2135 cons6way,2455 tree_doctor cons6way,2063 trees cons6way,537 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 trimming chainAilMel1,799 chainCanFam2,796 chainHg19,796 chainMm9,796 chainMonDom5,796 chainNetAilMel1,802 chainNetCanFam2,799 chainNetHg19,799 chainNetMm9,799 chainNetMonDom5,799 netAilMel1,799 netCanFam2,796 netHg19,796 netMm9,796 netMonDom5,796 trna rmsk,190 tRNAs,1 tRNAs,17 tRNAs,50 tRNAs,98 tRNAs,109 tRNAs,132 tRNAs,140 tRNAs,146 tRNAs,173 tRNAs,275 tRNAs,285 tRNAs,313 tRNAs,342 tRNAs,423 tRNAs,484 trna-derived tRNAs,149 tRNAs,301 trnas tRNAs,84 tRNAs,161 tRNAs,196 tRNAs,225 trnascan tRNAs,31 trnascan-se tRNAs,8 tRNAs,22 tRNAs,24 tRNAs,115 tRNAs,330 tRNAs,444 true augustusGene,132 tRNAs,83 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 tuned cons6way,1372 turn chainAilMel1,335 chainCanFam2,332 chainHg19,332 chainMm9,332 chainMonDom5,332 chainNetAilMel1,338 chainNetCanFam2,335 chainNetHg19,335 chainNetMm9,335 chainNetMonDom5,335 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netAilMel1,335 netCanFam2,332 netHg19,332 netMm9,332 netMonDom5,332 refGene,165 xenoRefGene,131 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 twinscan nscanGene,62 two chainAilMel1,907 chainCanFam2,904 chainHg19,904 chainMm9,904 chainMonDom5,904 chainNetAilMel1,910 chainNetCanFam2,907 chainNetHg19,907 chainNetMm9,907 chainNetMonDom5,907 cons6way,25 cons6way,151 netAilMel1,907 netCanFam2,904 netHg19,904 netMm9,904 netMonDom5,904 two-state cons6way,1665 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type cons6way,479 cons6way,1622 est,166 est,196 intronEst,247 intronEst,277 mrna,112 mrna,142 types augustusGene,89 chainAilMel1,507 chainCanFam2,504 chainHg19,504 chainMm9,504 chainMonDom5,504 chainNetAilMel1,510 chainNetCanFam2,507 chainNetHg19,507 chainNetMm9,507 chainNetMonDom5,507 ctgPos2,32 est,245 est,424 gap,106 gold,149 intronEst,326 intronEst,505 mrna,191 mrna,363 netAilMel1,507 netCanFam2,504 netHg19,504 netMm9,504 netMonDom5,504 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 tRNAs,311 typically cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 est,30 est,459 gc5Base,33 intronEst,42 intronEst,540 u chainAilMel1,1070 chainCanFam2,1067 chainHg19,1067 chainMm9,1067 chainMonDom5,1067 chainNetAilMel1,1073 chainNetCanFam2,1070 chainNetHg19,1070 chainNetMm9,1070 chainNetMonDom5,1070 cons6way,2331 netAilMel1,1070 netCanFam2,1067 netHg19,1067 netMm9,1067 netMonDom5,1067 ucsc blastHg18KG,32 blastHg18KG,43 cons6way,50 cons6way,398 cons6way,423 cons6way,2057 cons6way,2086 cons6way,2094 cons6way,2105 cons6way,2113 cons6way,2132 est,727 intronEst,811 mrna,444 nestedRepeats,245 refGene,317 tRNAs,340 xenoRefGene,283 unalignable cons6way,819 unaligned cons6way,301 uncertainty cons6way,858 under cons6way,219 cons6way,270 cons6way,373 cons6way,1939 cons6way,1947 undergone refGene,101 xenoRefGene,67 underlying refGene,32 xenoRefGene,35 underneath chainAilMel1,835 chainCanFam2,832 chainHg19,832 chainMm9,832 chainMonDom5,832 chainNetAilMel1,838 chainNetCanFam2,835 chainNetHg19,835 chainNetMm9,835 chainNetMonDom5,835 netAilMel1,835 netCanFam2,832 netHg19,832 netMm9,832 netMonDom5,832 ungapped chainAilMel1,446 chainCanFam2,443 chainHg19,443 chainMm9,443 chainMonDom5,443 chainNetAilMel1,449 chainNetCanFam2,446 chainNetHg19,446 chainNetMm9,446 chainNetMonDom5,446 netAilMel1,446 netCanFam2,443 netHg19,443 netMm9,443 netMonDom5,443 university chainAilMel1,921 chainAilMel1,955 chainAilMel1,1001 chainAilMel1,1024 chainCanFam2,918 chainCanFam2,952 chainCanFam2,998 chainCanFam2,1021 chainHg19,918 chainHg19,952 chainHg19,998 chainHg19,1021 chainMm9,918 chainMm9,952 chainMm9,998 chainMm9,1021 chainMonDom5,918 chainMonDom5,952 chainMonDom5,998 chainMonDom5,1021 chainNetAilMel1,924 chainNetAilMel1,958 chainNetAilMel1,1004 chainNetAilMel1,1027 chainNetCanFam2,921 chainNetCanFam2,955 chainNetCanFam2,1001 chainNetCanFam2,1024 chainNetHg19,921 chainNetHg19,955 chainNetHg19,1001 chainNetHg19,1024 chainNetMm9,921 chainNetMm9,955 chainNetMm9,1001 chainNetMm9,1024 chainNetMonDom5,921 chainNetMonDom5,955 chainNetMonDom5,1001 chainNetMonDom5,1024 cons6way,2420 netAilMel1,921 netAilMel1,955 netAilMel1,1001 netAilMel1,1024 netCanFam2,918 netCanFam2,952 netCanFam2,998 netCanFam2,1021 netHg19,918 netHg19,952 netHg19,998 netHg19,1021 netMm9,918 netMm9,952 netMm9,998 netMm9,1021 netMonDom5,918 netMonDom5,952 netMonDom5,998 netMonDom5,1021 nscanGene,30 nscanGene,120 unknown gap,151 rmsk,203 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unlike cons6way,1752 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed chainAilMel1,228 chainCanFam2,226 chainHg19,226 chainMm9,226 chainMonDom5,226 chainNetAilMel1,231 chainNetCanFam2,229 chainNetHg19,229 chainNetMm9,229 chainNetMonDom5,229 est,602 intronEst,683 netAilMel1,228 netCanFam2,226 netHg19,226 netMm9,226 netMonDom5,226 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainAilMel1,186 chainCanFam2,184 chainHg19,184 chainMm9,184 chainMonDom5,184 chainNetAilMel1,189 chainNetCanFam2,187 chainNetHg19,187 chainNetMm9,187 chainNetMonDom5,187 netAilMel1,186 netCanFam2,184 netHg19,184 netMm9,184 netMonDom5,184 unspliced est,6 est,631 intronEst,121 intronEst,712 unsure rmsk,263 up blastHg18KG,67 gold,84 rmsk,146 update est,782 intronEst,866 mrna,499 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 refGene,376 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoRefGene,341 updated refGene,36 xenoRefGene,39 usa cons6way,2421 nscanGene,35 use cons6way,1158 cons6way,1193 cons6way,1219 cons6way,1227 est,163 gold,95 intronEst,244 mrna,109 tRNAs,357 used augustusGene,146 augustusGene,174 augustusGene,183 augustusGene,231 augustusGene,246 blastHg18KG,186 chainAilMel1,295 chainAilMel1,668 chainAilMel1,699 chainAilMel1,790 chainAilMel1,842 chainAilMel1,875 chainCanFam2,293 chainCanFam2,665 chainCanFam2,696 chainCanFam2,787 chainCanFam2,839 chainCanFam2,872 chainHg19,293 chainHg19,665 chainHg19,696 chainHg19,787 chainHg19,839 chainHg19,872 chainMm9,293 chainMm9,665 chainMm9,696 chainMm9,787 chainMm9,839 chainMm9,872 chainMonDom5,293 chainMonDom5,665 chainMonDom5,696 chainMonDom5,787 chainMonDom5,839 chainMonDom5,872 chainNetAilMel1,298 chainNetAilMel1,671 chainNetAilMel1,702 chainNetAilMel1,793 chainNetAilMel1,845 chainNetAilMel1,878 chainNetCanFam2,296 chainNetCanFam2,668 chainNetCanFam2,699 chainNetCanFam2,790 chainNetCanFam2,842 chainNetCanFam2,875 chainNetHg19,296 chainNetHg19,668 chainNetHg19,699 chainNetHg19,790 chainNetHg19,842 chainNetHg19,875 chainNetMm9,296 chainNetMm9,668 chainNetMm9,699 chainNetMm9,790 chainNetMm9,842 chainNetMm9,875 chainNetMonDom5,296 chainNetMonDom5,668 chainNetMonDom5,699 chainNetMonDom5,790 chainNetMonDom5,842 chainNetMonDom5,875 cons6way,73 cons6way,776 cons6way,1151 cons6way,1182 cons6way,1312 cons6way,1751 cons6way,1796 cons6way,1833 cons6way,1862 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 est,120 est,272 est,331 est,570 gold,35 intronEst,201 intronEst,353 intronEst,412 intronEst,651 mrna,66 mrna,218 mrna,277 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netAilMel1,295 netAilMel1,668 netAilMel1,699 netAilMel1,790 netAilMel1,842 netAilMel1,875 netCanFam2,293 netCanFam2,665 netCanFam2,696 netCanFam2,787 netCanFam2,839 netCanFam2,872 netHg19,293 netHg19,665 netHg19,696 netHg19,787 netHg19,839 netHg19,872 netMm9,293 netMm9,665 netMm9,696 netMm9,787 netMm9,839 netMm9,872 netMonDom5,293 netMonDom5,665 netMonDom5,696 netMonDom5,787 netMonDom5,839 netMonDom5,872 nscanGene,101 rmsk,299 rmsk,341 useful chainAilMel1,280 chainAilMel1,480 chainCanFam2,278 chainCanFam2,477 chainHg19,278 chainHg19,477 chainMm9,278 chainMm9,477 chainMonDom5,278 chainMonDom5,477 chainNetAilMel1,283 chainNetAilMel1,483 chainNetCanFam2,281 chainNetCanFam2,480 chainNetHg19,281 chainNetHg19,480 chainNetMm9,281 chainNetMm9,480 chainNetMonDom5,281 chainNetMonDom5,480 microsat,20 netAilMel1,280 netAilMel1,480 netCanFam2,278 netCanFam2,477 netHg19,278 netHg19,477 netMm9,278 netMm9,477 netMonDom5,278 netMonDom5,477 user cons6way,556 est,390 intronEst,471 mrna,336 users refGene,182 xenoRefGene,148 uses cons6way,1263 cons6way,1663 rmsk,79 tRNAs,30 using augustusGene,294 blastHg18KG,52 blastHg18KG,76 blastHg18KG,88 chainAilMel1,76 chainAilMel1,605 chainAilMel1,764 chainCanFam2,74 chainCanFam2,602 chainCanFam2,761 chainHg19,74 chainHg19,602 chainHg19,761 chainMm9,74 chainMm9,602 chainMm9,761 chainMonDom5,74 chainMonDom5,602 chainMonDom5,761 chainNetAilMel1,79 chainNetAilMel1,608 chainNetAilMel1,767 chainNetCanFam2,77 chainNetCanFam2,605 chainNetCanFam2,764 chainNetHg19,77 chainNetHg19,605 chainNetHg19,764 chainNetMm9,77 chainNetMm9,605 chainNetMm9,764 chainNetMonDom5,77 chainNetMonDom5,605 chainNetMonDom5,764 cons6way,24 cons6way,43 cons6way,391 cons6way,411 cons6way,670 cons6way,1248 cons6way,1256 cons6way,1328 cons6way,1341 cons6way,1434 cons6way,1565 cons6way,1579 cons6way,1972 cons6way,2023 cons6way,2487 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 est,652 intronEst,733 microsat,90 mrna,392 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netAilMel1,76 netAilMel1,605 netAilMel1,764 netCanFam2,74 netCanFam2,602 netCanFam2,761 netHg19,74 netHg19,602 netHg19,761 netMm9,74 netMm9,602 netMm9,761 netMonDom5,74 netMonDom5,602 netMonDom5,761 nscanGene,15 nscanGene,158 nscanGene,203 refGene,258 rmsk,15 rmsk,290 tRNAs,21 tRNAs,401 xenoRefGene,224 usually est,37 gap,126 intronEst,49 nestedRepeats,192 tRNAs,239 tRNAs,307 utilities blastHg18KG,185 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 v.1.23 tRNAs,23 v3.1 augustusGene,7 valid est,211 intronEst,292 mrna,157 validate refGene,185 xenoRefGene,151 value cons6way,1680 est,282 intronEst,363 mrna,228 values cons6way,263 cons6way,672 cons6way,1963 van nscanGene,244 variation cons6way,2170 microsat,7 nestedRepeats,11 rmsk,6 simpleRepeat,8 variety cons6way,603 gc5Base,45 vb chainAilMel1,1028 chainCanFam2,1025 chainHg19,1025 chainMm9,1025 chainMonDom5,1025 chainNetAilMel1,1031 chainNetCanFam2,1028 chainNetHg19,1028 chainNetMm9,1028 chainNetMonDom5,1028 cons6way,2393 netAilMel1,1028 netCanFam2,1025 netHg19,1025 netMm9,1025 netMonDom5,1025 vector est,467 intronEst,548 version augustusGene,23 augustusGene,263 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 rmsk,58 versionalignment cons6way,478 versions augustusGene,279 nestedRepeats,251 nestedRepeats,267 vertebrate cons6way,356 cons6way,561 cons6way,1557 cons6way,2148 cons6way,2240 cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 tRNAs,160 vertebrates augustusGene,209 cons6way,318 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 vertical cons6way,903 very est,673 intronEst,754 vienna nscanGene,151 view chainAilMel1,457 chainCanFam2,454 chainHg19,454 chainMm9,454 chainMonDom5,454 chainNetAilMel1,460 chainNetCanFam2,457 chainNetHg19,457 chainNetMm9,457 chainNetMonDom5,457 cons6way,718 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 est,207 intronEst,288 mrna,153 netAilMel1,457 netCanFam2,454 netHg19,454 netMm9,454 netMonDom5,454 viewed est,635 gold,87 intronEst,716 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 visit refGene,39 visualization cons6way,1509 viterbi cons6way,1903 w blastHg18KG,156 blastHg18KG,158 chainAilMel1,1030 chainAilMel1,1050 chainAilMel1,1098 chainCanFam2,1027 chainCanFam2,1047 chainCanFam2,1095 chainHg19,1027 chainHg19,1047 chainHg19,1095 chainMm9,1027 chainMm9,1047 chainMm9,1095 chainMonDom5,1027 chainMonDom5,1047 chainMonDom5,1095 chainNetAilMel1,1033 chainNetAilMel1,1053 chainNetAilMel1,1101 chainNetCanFam2,1030 chainNetCanFam2,1050 chainNetCanFam2,1098 chainNetHg19,1030 chainNetHg19,1050 chainNetHg19,1098 chainNetMm9,1030 chainNetMm9,1050 chainNetMm9,1098 chainNetMonDom5,1030 chainNetMonDom5,1050 chainNetMonDom5,1098 cons6way,2311 cons6way,2395 cons6way,2438 ctgPos2,34 gold,156 netAilMel1,1030 netAilMel1,1050 netAilMel1,1098 netCanFam2,1027 netCanFam2,1047 netCanFam2,1095 netHg19,1027 netHg19,1047 netHg19,1095 netMm9,1027 netMm9,1047 netMm9,1095 netMonDom5,1027 netMonDom5,1047 netMonDom5,1095 waack augustusGene,318 was augustusGene,230 augustusGene,245 augustusGene,264 augustusGene,280 blastHg18KG,178 chainAilMel1,649 chainAilMel1,667 chainAilMel1,788 chainAilMel1,833 chainAilMel1,841 chainAilMel1,861 chainAilMel1,873 chainAilMel1,898 chainAilMel1,916 chainAilMel1,951 chainCanFam2,646 chainCanFam2,664 chainCanFam2,785 chainCanFam2,830 chainCanFam2,838 chainCanFam2,858 chainCanFam2,870 chainCanFam2,895 chainCanFam2,913 chainCanFam2,948 chainHg19,646 chainHg19,664 chainHg19,785 chainHg19,830 chainHg19,838 chainHg19,858 chainHg19,870 chainHg19,895 chainHg19,913 chainHg19,948 chainMm9,646 chainMm9,664 chainMm9,785 chainMm9,830 chainMm9,838 chainMm9,858 chainMm9,870 chainMm9,895 chainMm9,913 chainMm9,948 chainMonDom5,646 chainMonDom5,664 chainMonDom5,785 chainMonDom5,830 chainMonDom5,838 chainMonDom5,858 chainMonDom5,870 chainMonDom5,895 chainMonDom5,913 chainMonDom5,948 chainNetAilMel1,652 chainNetAilMel1,670 chainNetAilMel1,791 chainNetAilMel1,836 chainNetAilMel1,844 chainNetAilMel1,864 chainNetAilMel1,876 chainNetAilMel1,901 chainNetAilMel1,919 chainNetAilMel1,954 chainNetCanFam2,649 chainNetCanFam2,667 chainNetCanFam2,788 chainNetCanFam2,833 chainNetCanFam2,841 chainNetCanFam2,861 chainNetCanFam2,873 chainNetCanFam2,898 chainNetCanFam2,916 chainNetCanFam2,951 chainNetHg19,649 chainNetHg19,667 chainNetHg19,788 chainNetHg19,833 chainNetHg19,841 chainNetHg19,861 chainNetHg19,873 chainNetHg19,898 chainNetHg19,916 chainNetHg19,951 chainNetMm9,649 chainNetMm9,667 chainNetMm9,788 chainNetMm9,833 chainNetMm9,841 chainNetMm9,861 chainNetMm9,873 chainNetMm9,898 chainNetMm9,916 chainNetMm9,951 chainNetMonDom5,649 chainNetMonDom5,667 chainNetMonDom5,788 chainNetMonDom5,833 chainNetMonDom5,841 chainNetMonDom5,861 chainNetMonDom5,873 chainNetMonDom5,898 chainNetMonDom5,916 chainNetMonDom5,951 cons6way,1493 cons6way,1563 cons6way,1694 cons6way,1750 cons6way,1832 cons6way,1860 cons6way,2021 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 est,695 est,724 intronEst,776 intronEst,808 microsat,108 mrna,411 mrna,441 netAilMel1,649 netAilMel1,667 netAilMel1,788 netAilMel1,833 netAilMel1,841 netAilMel1,861 netAilMel1,873 netAilMel1,898 netAilMel1,916 netAilMel1,951 netCanFam2,646 netCanFam2,664 netCanFam2,785 netCanFam2,830 netCanFam2,838 netCanFam2,858 netCanFam2,870 netCanFam2,895 netCanFam2,913 netCanFam2,948 netHg19,646 netHg19,664 netHg19,785 netHg19,830 netHg19,838 netHg19,858 netHg19,870 netHg19,895 netHg19,913 netHg19,948 netMm9,646 netMm9,664 netMm9,785 netMm9,830 netMm9,838 netMm9,858 netMm9,870 netMm9,895 netMm9,913 netMm9,948 netMonDom5,646 netMonDom5,664 netMonDom5,785 netMonDom5,830 netMonDom5,838 netMonDom5,858 netMonDom5,870 netMonDom5,895 netMonDom5,913 netMonDom5,948 refGene,285 refGene,314 rmsk,12 rmsk,262 simpleRepeat,68 xenoRefGene,251 xenoRefGene,280 washington nscanGene,29 nscanGene,119 way cons6way,1642 phastCons6way,2 phastConsElements6way,2 phyloP6way,2 ways cons6way,605 gc5Base,47 we cons6way,439 rmsk,122 weaknesses cons6way,157 webb chainAilMel1,930 chainAilMel1,967 chainCanFam2,927 chainCanFam2,964 chainHg19,927 chainHg19,964 chainMm9,927 chainMm9,964 chainMonDom5,927 chainMonDom5,964 chainNetAilMel1,933 chainNetAilMel1,970 chainNetCanFam2,930 chainNetCanFam2,967 chainNetHg19,930 chainNetHg19,967 chainNetMm9,930 chainNetMm9,967 chainNetMonDom5,930 chainNetMonDom5,967 cons6way,2040 netAilMel1,930 netAilMel1,967 netCanFam2,927 netCanFam2,964 netHg19,927 netHg19,964 netMm9,927 netMm9,964 netMonDom5,927 netMonDom5,964 weekly refGene,37 xenoRefGene,40 weight tRNAs,493 well augustusGene,78 cons6way,223 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 est,539 est,562 intronEst,620 intronEst,643 nscanGene,76 rmsk,54 were augustusGene,50 augustusGene,66 augustusGene,125 augustusGene,149 augustusGene,182 blastHg18KG,46 blastHg18KG,70 blastHg18KG,85 blastHg18KG,112 blastHg18KG,134 blastHg18KG,191 chainAilMel1,578 chainAilMel1,586 chainAilMel1,593 chainAilMel1,600 chainAilMel1,612 chainAilMel1,685 chainAilMel1,759 chainAilMel1,939 chainAilMel1,983 chainAilMel1,997 chainCanFam2,575 chainCanFam2,583 chainCanFam2,590 chainCanFam2,597 chainCanFam2,609 chainCanFam2,682 chainCanFam2,756 chainCanFam2,936 chainCanFam2,980 chainCanFam2,994 chainHg19,575 chainHg19,583 chainHg19,590 chainHg19,597 chainHg19,609 chainHg19,682 chainHg19,756 chainHg19,936 chainHg19,980 chainHg19,994 chainMm9,575 chainMm9,583 chainMm9,590 chainMm9,597 chainMm9,609 chainMm9,682 chainMm9,756 chainMm9,936 chainMm9,980 chainMm9,994 chainMonDom5,575 chainMonDom5,583 chainMonDom5,590 chainMonDom5,597 chainMonDom5,609 chainMonDom5,682 chainMonDom5,756 chainMonDom5,936 chainMonDom5,980 chainMonDom5,994 chainNetAilMel1,581 chainNetAilMel1,589 chainNetAilMel1,596 chainNetAilMel1,603 chainNetAilMel1,615 chainNetAilMel1,688 chainNetAilMel1,762 chainNetAilMel1,942 chainNetAilMel1,986 chainNetAilMel1,1000 chainNetCanFam2,578 chainNetCanFam2,586 chainNetCanFam2,593 chainNetCanFam2,600 chainNetCanFam2,612 chainNetCanFam2,685 chainNetCanFam2,759 chainNetCanFam2,939 chainNetCanFam2,983 chainNetCanFam2,997 chainNetHg19,578 chainNetHg19,586 chainNetHg19,593 chainNetHg19,600 chainNetHg19,612 chainNetHg19,685 chainNetHg19,759 chainNetHg19,939 chainNetHg19,983 chainNetHg19,997 chainNetMm9,578 chainNetMm9,586 chainNetMm9,593 chainNetMm9,600 chainNetMm9,612 chainNetMm9,685 chainNetMm9,759 chainNetMm9,939 chainNetMm9,983 chainNetMm9,997 chainNetMonDom5,578 chainNetMonDom5,586 chainNetMonDom5,593 chainNetMonDom5,600 chainNetMonDom5,612 chainNetMonDom5,685 chainNetMonDom5,759 chainNetMonDom5,939 chainNetMonDom5,983 chainNetMonDom5,997 cons6way,41 cons6way,308 cons6way,389 cons6way,409 cons6way,1323 cons6way,1336 cons6way,1371 cons6way,1385 cons6way,1431 cons6way,1450 cons6way,1505 cons6way,1595 cons6way,1797 cons6way,1865 cons6way,1886 cons6way,1895 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 est,589 est,647 est,719 gap,159 gc5Base,79 intronEst,670 intronEst,728 mrna,387 mrna,435 netAilMel1,578 netAilMel1,586 netAilMel1,593 netAilMel1,600 netAilMel1,612 netAilMel1,685 netAilMel1,759 netAilMel1,939 netAilMel1,983 netAilMel1,997 netCanFam2,575 netCanFam2,583 netCanFam2,590 netCanFam2,597 netCanFam2,609 netCanFam2,682 netCanFam2,756 netCanFam2,936 netCanFam2,980 netCanFam2,994 netHg19,575 netHg19,583 netHg19,590 netHg19,597 netHg19,609 netHg19,682 netHg19,756 netHg19,936 netHg19,980 netHg19,994 netMm9,575 netMm9,583 netMm9,590 netMm9,597 netMm9,609 netMm9,682 netMm9,756 netMm9,936 netMm9,980 netMm9,994 netMonDom5,575 netMonDom5,583 netMonDom5,590 netMonDom5,597 netMonDom5,609 netMonDom5,682 netMonDom5,756 netMonDom5,936 netMonDom5,980 netMonDom5,994 refGene,252 refGene,268 refGene,309 tRNAs,345 xenoRefGene,218 xenoRefGene,234 xenoRefGene,275 wgs gold,158 what tRNAs,112 wheeler est,779 intronEst,863 mrna,496 when augustusGene,188 augustusGene,238 chainAilMel1,408 chainCanFam2,405 chainHg19,405 chainMm9,405 chainMonDom5,405 chainNetAilMel1,411 chainNetCanFam2,408 chainNetHg19,408 chainNetMm9,408 chainNetMonDom5,408 cons6way,463 cons6way,1009 cons6way,2006 est,143 est,153 est,680 intronEst,33 intronEst,224 intronEst,234 intronEst,761 mrna,89 mrna,99 mrna,396 netAilMel1,408 netCanFam2,405 netHg19,405 netMm9,405 netMonDom5,405 refGene,270 tRNAs,355 xenoRefGene,236 where chainAilMel1,193 chainCanFam2,191 chainHg19,191 chainMm9,191 chainMonDom5,191 chainNetAilMel1,196 chainNetCanFam2,194 chainNetHg19,194 chainNetMm9,194 chainNetMonDom5,194 cons6way,1211 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,102 netAilMel1,193 netCanFam2,191 netHg19,191 netMm9,191 netMonDom5,191 whether chainAilMel1,857 chainCanFam2,854 chainHg19,854 chainMm9,854 chainMonDom5,854 chainNetAilMel1,860 chainNetCanFam2,857 chainNetHg19,857 chainNetMm9,857 chainNetMonDom5,857 netAilMel1,857 netCanFam2,854 netHg19,854 netMm9,854 netMonDom5,854 tRNAs,138 which augustusGene,159 augustusGene,227 chainAilMel1,325 chainAilMel1,616 chainAilMel1,822 chainCanFam2,322 chainCanFam2,613 chainCanFam2,819 chainHg19,322 chainHg19,613 chainHg19,819 chainMm9,322 chainMm9,613 chainMm9,819 chainMonDom5,322 chainMonDom5,613 chainMonDom5,819 chainNetAilMel1,328 chainNetAilMel1,619 chainNetAilMel1,825 chainNetCanFam2,325 chainNetCanFam2,616 chainNetCanFam2,822 chainNetHg19,325 chainNetHg19,616 chainNetHg19,822 chainNetMm9,325 chainNetMm9,616 chainNetMm9,822 chainNetMonDom5,325 chainNetMonDom5,616 chainNetMonDom5,822 cons6way,70 cons6way,327 cons6way,347 cons6way,586 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 est,103 est,230 est,496 est,521 est,667 intronEst,184 intronEst,311 intronEst,577 intronEst,602 intronEst,748 mrna,176 nestedRepeats,31 nestedRepeats,87 netAilMel1,325 netAilMel1,616 netAilMel1,822 netCanFam2,322 netCanFam2,613 netCanFam2,819 netHg19,322 netHg19,613 netHg19,819 netMm9,322 netMm9,613 netMm9,819 netMonDom5,322 netMonDom5,613 netMonDom5,819 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 simpleRepeat,27 while chainAilMel1,216 chainCanFam2,214 chainHg19,214 chainMm9,214 chainMonDom5,214 chainNetAilMel1,219 chainNetCanFam2,217 chainNetHg19,217 chainNetMm9,217 chainNetMonDom5,217 cons6way,247 netAilMel1,216 netCanFam2,214 netHg19,214 netMm9,214 netMonDom5,214 white gap,89 whole chainAilMel1,465 chainCanFam2,462 chainHg19,462 chainMm9,462 chainMonDom5,462 chainNetAilMel1,468 chainNetCanFam2,465 chainNetHg19,465 chainNetMm9,465 chainNetMonDom5,465 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 ctgPos2,36 netAilMel1,465 netCanFam2,462 netHg19,462 netMm9,462 netMonDom5,462 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 wig cons6way,540 cons6way,544 wig-scores cons6way,1841 wiggle cons6way,582 cons6way,653 cons6way,2121 wiggles cons6way,597 wild gold,51 wildcards est,268 intronEst,349 mrna,214 will cons6way,339 est,301 est,319 est,348 est,365 intronEst,382 intronEst,400 intronEst,429 intronEst,446 mrna,247 mrna,265 mrna,294 mrna,311 rmsk,277 rmsk,283 window cons6way,1763 windows gc5Base,7 gc5Base,28 wish est,232 intronEst,313 mrna,178 refGene,239 xenoRefGene,205 with augustusGene,127 augustusGene,322 blastHg18KG,48 blastHg18KG,72 chainAilMel1,43 chainAilMel1,207 chainAilMel1,218 chainAilMel1,588 chainAilMel1,700 chainAilMel1,776 chainAilMel1,900 chainAilMel1,932 chainAilMel1,964 chainAilMel1,1101 chainCanFam2,42 chainCanFam2,205 chainCanFam2,216 chainCanFam2,585 chainCanFam2,697 chainCanFam2,773 chainCanFam2,897 chainCanFam2,929 chainCanFam2,961 chainCanFam2,1098 chainHg19,42 chainHg19,205 chainHg19,216 chainHg19,585 chainHg19,697 chainHg19,773 chainHg19,897 chainHg19,929 chainHg19,961 chainHg19,1098 chainMm9,42 chainMm9,205 chainMm9,216 chainMm9,585 chainMm9,697 chainMm9,773 chainMm9,897 chainMm9,929 chainMm9,961 chainMm9,1098 chainMonDom5,42 chainMonDom5,205 chainMonDom5,216 chainMonDom5,585 chainMonDom5,697 chainMonDom5,773 chainMonDom5,897 chainMonDom5,929 chainMonDom5,961 chainMonDom5,1098 chainNetAilMel1,46 chainNetAilMel1,210 chainNetAilMel1,221 chainNetAilMel1,591 chainNetAilMel1,703 chainNetAilMel1,779 chainNetAilMel1,903 chainNetAilMel1,935 chainNetAilMel1,967 chainNetAilMel1,1104 chainNetCanFam2,45 chainNetCanFam2,208 chainNetCanFam2,219 chainNetCanFam2,588 chainNetCanFam2,700 chainNetCanFam2,776 chainNetCanFam2,900 chainNetCanFam2,932 chainNetCanFam2,964 chainNetCanFam2,1101 chainNetHg19,45 chainNetHg19,208 chainNetHg19,219 chainNetHg19,588 chainNetHg19,700 chainNetHg19,776 chainNetHg19,900 chainNetHg19,932 chainNetHg19,964 chainNetHg19,1101 chainNetMm9,45 chainNetMm9,208 chainNetMm9,219 chainNetMm9,588 chainNetMm9,700 chainNetMm9,776 chainNetMm9,900 chainNetMm9,932 chainNetMm9,964 chainNetMm9,1101 chainNetMonDom5,45 chainNetMonDom5,208 chainNetMonDom5,219 chainNetMonDom5,588 chainNetMonDom5,700 chainNetMonDom5,776 chainNetMonDom5,900 chainNetMonDom5,932 chainNetMonDom5,964 chainNetMonDom5,1101 cons6way,144 cons6way,310 cons6way,1319 cons6way,1391 cons6way,1667 cons6way,1900 cons6way,1955 cons6way,2371 cons6way,2441 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 est,102 est,498 est,636 est,672 est,715 gap,37 gc5Base,35 intronEst,183 intronEst,579 intronEst,717 intronEst,753 intronEst,796 microsat,69 microsat,76 mrna,431 nestedRepeats,133 netAilMel1,43 netAilMel1,207 netAilMel1,218 netAilMel1,588 netAilMel1,700 netAilMel1,776 netAilMel1,900 netAilMel1,932 netAilMel1,964 netAilMel1,1101 netCanFam2,42 netCanFam2,205 netCanFam2,216 netCanFam2,585 netCanFam2,697 netCanFam2,773 netCanFam2,897 netCanFam2,929 netCanFam2,961 netCanFam2,1098 netHg19,42 netHg19,205 netHg19,216 netHg19,585 netHg19,697 netHg19,773 netHg19,897 netHg19,929 netHg19,961 netHg19,1098 netMm9,42 netMm9,205 netMm9,216 netMm9,585 netMm9,697 netMm9,773 netMm9,897 netMm9,929 netMm9,961 netMm9,1098 netMonDom5,42 netMonDom5,205 netMonDom5,216 netMonDom5,585 netMonDom5,697 netMonDom5,773 netMonDom5,897 netMonDom5,929 netMonDom5,961 netMonDom5,1098 nscanGene,47 refGene,261 refGene,305 rmsk,111 rmsk,225 simpleRepeat,52 tRNAs,7 tRNAs,58 tRNAs,85 tRNAs,119 tRNAs,162 tRNAs,177 tRNAs,197 tRNAs,242 xenoRefGene,227 xenoRefGene,271 within cons6way,973 est,136 est,549 est,704 gold,124 intronEst,217 intronEst,630 intronEst,785 mrna,82 mrna,420 refGene,116 refGene,294 simpleRepeat,37 xenoRefGene,82 xenoRefGene,260 without cons6way,1156 wj chainAilMel1,1044 chainAilMel1,1086 chainCanFam2,1041 chainCanFam2,1083 chainHg19,1041 chainHg19,1083 chainMm9,1041 chainMm9,1083 chainMonDom5,1041 chainMonDom5,1083 chainNetAilMel1,1047 chainNetAilMel1,1089 chainNetCanFam2,1044 chainNetCanFam2,1086 chainNetHg19,1044 chainNetHg19,1086 chainNetMm9,1044 chainNetMm9,1086 chainNetMonDom5,1044 chainNetMonDom5,1086 cons6way,2305 cons6way,2348 cons6way,2426 cons6way,2457 est,798 intronEst,882 mrna,515 netAilMel1,1044 netAilMel1,1086 netCanFam2,1041 netCanFam2,1083 netHg19,1041 netHg19,1083 netMm9,1041 netMm9,1083 netMonDom5,1041 netMonDom5,1083 refGene,335 xenoRefGene,301 worldwide est,741 intronEst,825 mrna,458 refGene,325 xenoRefGene,291 worm cons6way,2242 wortman nscanGene,181 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 written blastHg18KG,179 blastHg18KG,192 microsat,109 simpleRepeat,69 ww cons6way,2477 www.repeatmasker.org nestedRepeats,333 rmsk,356 x cons6way,1981 yang cons6way,1656 cons6way,2280 yap chainAilMel1,1027 chainCanFam2,1024 chainHg19,1024 chainMm9,1024 chainMonDom5,1024 chainNetAilMel1,1030 chainNetCanFam2,1027 chainNetHg19,1027 chainNetMm9,1027 chainNetMonDom5,1027 cons6way,2392 netAilMel1,1027 netCanFam2,1024 netHg19,1024 netMm9,1024 netMonDom5,1024 yeast cons6way,2244 yellow cons6way,462 cons6way,847 york cons6way,2275 you est,231 intronEst,312 mrna,177 refGene,238 rmsk,115 xenoRefGene,204 younger nestedRepeats,94 z chainAilMel1,1090 chainCanFam2,1087 chainHg19,1087 chainMm9,1087 chainMonDom5,1087 chainNetAilMel1,1093 chainNetCanFam2,1090 chainNetHg19,1090 chainNetMm9,1090 chainNetMonDom5,1090 cons6way,2281 cons6way,2430 netAilMel1,1090 netCanFam2,1087 netHg19,1087 netMm9,1087 netMonDom5,1087 zebrafish augustusGene,202 augustusGene,278 zhang chainAilMel1,928 chainAilMel1,1089 chainCanFam2,925 chainCanFam2,1086 chainHg19,925 chainHg19,1086 chainMm9,925 chainMm9,1086 chainMonDom5,925 chainMonDom5,1086 chainNetAilMel1,931 chainNetAilMel1,1092 chainNetCanFam2,928 chainNetCanFam2,1089 chainNetHg19,928 chainNetHg19,1089 chainNetMm9,928 chainNetMm9,1089 chainNetMonDom5,928 chainNetMonDom5,1089 cons6way,2429 netAilMel1,928 netAilMel1,1089 netCanFam2,925 netCanFam2,1086 netHg19,925 netHg19,1086 netMm9,925 netMm9,1086 netMonDom5,925 netMonDom5,1086 zheng chainAilMel1,927 chainCanFam2,924 chainHg19,924 chainMm9,924 chainMonDom5,924 chainNetAilMel1,930 chainNetCanFam2,927 chainNetHg19,927 chainNetMm9,927 chainNetMonDom5,927 netAilMel1,927 netCanFam2,924 netHg19,924 netMm9,924 netMonDom5,924 zimmermann nscanGene,143 zone tRNAs,208 zoom cons6way,728 zoomed cons6way,464 zoomed-in cons6way,1010