##maf version=1 scoring=roast.v3.3 a score=871718.000000 s hg38.chr17_GL383563v3_alt 0 1061 + 375691 GATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCTGTCCACTAGGCCACAGCCGCCCTCCAGGCCCACTATGCACACATCTTCCCCTCCAAGGTTTGTTCTGCCCCTGCCCTGACTCCCAGCCCTGTGGGGGTCCTGACCGCACCTCACCTGGCTCAGACTCTTGACGCTGC------------------------CCTGG---CTGCCCCACCACTGCTTCTGCCCGAGAGTCACGTGAGGCTGAGAGTAGGGGCAGGGGCAGCAGTGGTGCCAGTTGGGGGGCGGTCCAGTGGGAGGAGCCTCAGCCTCGCGGGCTGCTCCGTGGGACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACGGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCTGCTGCATGGTTCCCAGAGGCTGGACTGGGGCAGGTGCCAACTGAAGCTGCTGGGGCAGCATGGGCAGGATGTTCTGCACACAAACCTTGGAGAAGAAGATGTGTGCATAGCAGGTccactgctgctgcccctgccctgactcccagccctgcctgaccccacctcaacctgctcaggctctggcgcaaccctggctgccctgccactgcctctgccccAGAGTTGGGGCCTT-GACAACCTGGTTGGAAGGGGACACCCCAGCCCTG-CCTCAACACCTGGGGGTCTCCATAACTACCACAGGCAGGTGGGCAACCCCA---AAGATCCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGAAATGGAGGGCAGGATGGTTATCTTCTCCCAGGTGAAGCCATTTAATCCTTTCAGTTTGGGACGGAGTAAGGCCTTCCTC--tttttttttttttttttttttttgagaccgagtcttgctctgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacctcttcccgccgggttcacgccattctcctgcctcagccttccgggtagctaggattacaggtggacgctaccacgtccggctaatttttgtatttttagtacagacggggcttcatcatcttggccagg s panTro4.chr17 62112 1062 + 82630442 GATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCTGTCCACTAGGCCACAGCCGCCCTCCAGGCCCACTATGCACACATCTTCCCCTCCAAGGTTTGTTCTGCCCCTGCCCTGACTCCCAGCCCTGTGGGGGTCCTGACCGCACCTCACCTGGCTCAGACTCTTGACGCTGC------------------------CCTGG---CTGCCCCACCACTGCCTCTGCCCGAGAGTCACGTGAGGCTGAGAGTAGGGGCAGGGGCAGCAGTGGTGCCAGTTGGGGGGCGGTCCAGTGGGAGGAGCCTCAGCCTCGCGGGCTGCTCCGTGGGACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAGCTGCAGGTGAAACGGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCTGCTGCATGGTTCCCAGAGGCTGGACTGGGACGGGTGCCAACTGAAGCTGCTGGGGCAGCATGGGCAGGATGTTCTGCACACAAACCTTGGAGAAGAAGATGTGTGCATAGCGGGTCCACTGCTGCTGCCCCTGCCCTGACTCCCAGCCCTGCCTGACCCCACCTCAACCTGCTCAGGCTCTGGCGCAACCCTGGCTGCCCTGCCACTGCCTCTGCCCCAGAGTTGGGGCCTT-GACAGCCTGGTTGGAAGGGGACACCCCAGCCCTG-CCTCAACACCTGGGGGTCTCCATAACTACCACAGGCAGGTGGGCAACCCCA---AAGATCCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGCAATGGAGGGCAGGATGGTTATCTTCTCCCAGGTAAAGCCATTTAATCCTTTCAGTTTGGGACGGAGTAAGGCCTGCCtct-tttttttttttttttttttttttgagaccgagtcttgctctgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacctcttcccgccgggttcacgccattctcctgcctcagccttccgggtagctaggattacaggtgcacgctaccacgtccggctaatttttgtatttttagtacagacggggcttcatcatcctggccagg i panTro4.chr17 N 0 I 341 s ponAbe2.chrUn 67755690 1063 - 72422247 GATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCTGTCCACTAGGCCACAGCCGCCCGCCAGGCCCACTATGCACGCATCTTCCCCTCCAAGGTTTGTTCTGCCCCTGCCCTGACTCCCAGCCCTGCGGGGGTCCTGACCCCACCTCACCCGGCTCAGACTC-TGACGCTGC------------------------CCTGG---CTGCCCCACCACTGCCTCTGCCC--GAGTCACGTGAGGCTGAGAGTAGGGGCATGGGCAGCAGTGGTGCCAGTTGGGGGGTGGTCCAGTGGGAGGAGCCTCAGCCTCGCAGGCTGCTCCATGGGACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACGGATGCTGCTGGTGGGTGCAGGGCCGCTGGGAGCCGCTACATGGGTCCCAGAGGCTGGACTGGGGCAGGTGCCAACTGAAGCTGCTGGGGCAGCATGGGCAGGATGTTCTGCACACAAACCTTGGAGAAGAAGATGTGTGCATAGCGGGTCCACTGCTGCTGCccctgccctgactcccagccctgcctgaccccacctcaccctgctcaggctctggcgcaaccctggctgccctaccactgcctctgcccCAGAGTTGGGGCCTC-CACAGCCTGGCTGGAAGGGGACACCCCAGCCCTG-CCTCAACACCTGGGTCTCTCCATAACTACCACAGGCAGGTGGGCGACCCCAAAGAAGATCCCAGGACTCACAGTACTCCCTGAGAACACGGACAGTATGTGGGGGTAGCAATGGAGGGCAGGATGGTTATCTTCTCCCGGGTAAAGCCATTTAATCCTTTCAGCTTGGGACGGAATAAGGCCTGCttctctttttttattttattttttttttgagacggagtcttgctctgtcgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctcttcctgccgggttcacgccattctcctgcctcagccttccaggtagctgggattacaggtgtacgctaccacgtccggctaatttttgtatttttagtacagacggggcttcaccatcttggccagg i ponAbe2.chrUn N 0 C 0 s nomLeu3.chr17 46744230 1057 - 99891981 GATCATGCAGCTCTTCCAGGCCCACTGCTTCTTCCCGTCC-CCAGGCCACAGCCGCCCTCCAGGCCCACTATGCACACATCTTCCCCTCCAAGGTTTGTTCTGCCCCTGCCCTGACTCCCAGCCCTGCGGGGGTCCTGACCCCACCTCATCTGGCTCAGACTC-TGAGGCTGC------------------------CCTGG---CTGCCCCACCACTGCCTCTGCCCGAGAGTCACGCGAAGCTGAGAGTCGGGGCAGGGGCAGCAGTGGTGCCAGCTGGGGGGCGGTCCAGTGGGAGGTGGCTCAGCCTCGTGGGCTGCTCCGTGGGACTGATGACTGCATGATCTTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACGGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCCGCTGCATGGGTCCCAGAGGCTGGACTGGGGCAGGTGCCAACTGAAGCTGCTGGGGCAGCATGGGCAGGATGTTCTGCACACAAAGCTTGG---AGAAGATGTGTGCATAGTGGGTCCACTGCTGCTGCCCCTGCCCTGACTCCCAGCCCTGCCTGACCCCACCTCACCGGGCTCAGGCTCTGGCACAACCCTGGCTGCCCTGCCACTGCCTCTGCCCCAGAGTTGGGGCCTC-GACAGCCTGGCTGGAAGGGGACACCCCAGCCCTG-CCTCAACCCCTGGGTCCCTCCATAATTACCACAGGCAGGTGGGGGACCCCAAAGAAGGTCCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGGAATGGAGGGCAGGATGGTTATCTTCTCCCAGGTAAAGCCATATCATCCTTTCAGTTTGGGATAGAATAAGGCCTTCG----CCTCtttttttttttttttttttgagacggagtctttctctgtcgcccaggctggagtgcagtggtgcgatcttggctcactgcaacctcctcctgctgggttcacgccattctcctgcctcagcctcctgggtagctgggattacaggtgcatgctaccacgtctggctaatttttgtatttttagtagagacggggtttcaccatcttggctagg i nomLeu3.chr17 N 0 I 7 s macFas5.chr3 127670374 1089 - 192294377 GGTCATGCAGGTCTTCCAGGCCCACGGCTTCTTCCAGTTCCCCTAGACACAGCCGCCCTCCAGGCCCGCTATGCACACATCTTCCCCTCCAAGGTTTGTTCTGCCCGTGCCCCGACTCCCATCCCCGCGAGGGTCCTGACCACACCTCACCTGGCTGGGGCTC-TGGCGCTGctgccccgccactgcctcgccactgccttgccactgcctcgccactgcctcTG-----GAGTCCTGCGAGGCTGGTAGTCGGAGCAGGGGCAGCAGCGGTGCCGTTTGGGGGGCAGTCCAATGAGAGGAGCCTCAGCCCCACGGGCTGCTCGGTGGGAGTGACGACTGCATGACATTCTGGGCACCTCACGGATCTTCAACTGCAGGTGAAACCGATGCTGGTGGTGGGTGCAGGGCCGCTGGGAGCCGCTGCCTGGGTCCCAGAGGCTGGGCTGGGGCAGGTGCCACCTGAAGCTGCTGGAGCAGCGTGGGCAGGATGTTCTGCACACAAACCTTGGAGGAGAAGATGTATGCATAGCTGGTCCACCACTGCTGCCCCTGCTCTGACTCCCAGGACTGCCTGACCCCACCTCACCCTGCTCATGCTCTGGTGTAACCCTGGCTGCCCTGCCACTGCCTCTGCCCCAGAATCGGGGCCTTGGACAGCCTGGCTGGAAAGGGACTCCCTAGTCCTGACCCCCACCCCCGGGTCCCTCCATAACTACCACAGGCAGGTGGGGGACCCCGGAGAAGATCCCAGGACTCACAGTACTCCCTGAGGACACGGACAGTATGTGGGGGTAGCAATGGAGGGCAGGATGGTTATCTTCTCCCGGGTAAAGTCATTTCATCCTTTCAGTTTGGGGCAGAATAAGGCCTGCTCCtttttttttttttttttttttttttgaaatggagtctcgctctgtcgcccagactggagtgcagtggcgtgatcttggctcactgcaagctccgcctcccacgttgatgccattctcctgcctcagcctcccaagtagctgggattacaggtgcatgctaccacgcccggctaatttttgtatttttagtagagacagggtttcaccatcttggccagg i macFas5.chr3 N 0 C 0 a score=533715.000000 s hg38.chr17_GL383563v3_alt 1061 701 + 375691 ctgatttcgatctcctgacatcgtgatctgcctgcctccccctcccaaagtgctgggattacaggcgtgagccaccacgcctggccAAGGCCTGCTCCTCT--TATCTATACCCCCTACCCCTGCAGCTGTGC-CGGGGGAAAGCTG-------------GGCAGTTTCCCTCCTCCGAGCCCCTGTACATACCATGAATTGTGGGACCTTCAGAGCTTTTCACTTTTCAGAAAATAGCTCCTGCTGGGGCTACAAGATGGAGTGTGAAGAGGGCCTTGGGCCACAGGGAGGCGCCTGTGGACTAGGGGGAGTTCATGCACCCC-TTCTTTCCCCAGAGGGGCTGGACTCAGGTGAGTATGGGGGTGGGGGCTCCTACACTTCGACACAGGCAGCGGGAGGGTTTTCTCCCCATTCCCTCTGCACTCCCAACTTGAGCTATACTTTTTAAGAAAGTGATTCACCCTGCCTTTGCCCCCTTCCCCAGAACAGAACACGTTGATCGTGGGCGATATTTTTCATTGTGCCAAAAAGTTGCCATGACCGTCATTAAACCTGTTTAACACCAAATAATAAGGAAAATAAA----------------------ATAAAAAATTCGGGCTTGGCGCAGAAACTCACTCCAAATAAATTACCTACCAAAATATTTACATAATGGTGGAAAT-ATTCCAAAATTCAATA-TTTTGGGATTTATACACAAAAGATAAACAAATTAGAGGCCA s panTro4.chr17 63515 696 + 82630442 ctgatttcgatctcctgacatcgtgatctgcctgcctccccctcctaaaatgctgggattacaggcgtgagccaccacgcctggccAAGGCCTGCTCCTCT--TATCTATACCCCCTACCCCTGCAGCTGTGC-CGGGGGAAAGCTG-------------GGCAGTTTCCCTCCTCCGAGCCCCTGTACATACCATGAATTGTGGGACCTTCAGAGCTTTTCACTTTTCGGAAAATAGCTCCTGCTGGG-CTACAAGGTGGAGTGTGAAGAGGGCCTTGGGCCACAGGGAGGCGCCTGTGGACTAGGGGGAGTTCATGCACCCC-TTCTTTCCCCAGAGGGGCTGGACTCAGGTGAGTATGGGGGTGGGGGCTCCTGCACTTCGACACAGGCAGCGGGAGGGTTTTCTCCCCATTCCCTCTGCACTCCCAACTTGAGCTATACTTTTTAAGAAAGTGATTCACCCTGCCTTTGCCCCCTTCCCCAGAACAGAACACGTTGATCATGGGCGATATTTTTCATCATGCCAAAAAGTTGCCATGACCGTCATTAAACCTGTTTAACACCAAATAATAAGGAAAATAAA----------------------ATTAAAAATTCGGGCATGGTGCAGAAACTCACTCCAAATAAATTACCTACCAAAATAT----ATAATGGTGGAAAT-ATTCCAAAATTCAATA-TTTTGGGATTTATACACAAAAGATAAACAAATTAGAGGCCA i panTro4.chr17 I 341 C 0 s ponAbe2.chrUn 67756753 696 - 72422247 ctgattttgatctcctgacatcgtgatccgcctgcctccatctcccaaagtgctgggattacagacttgagccaccacgcctggccAAGGCCTGCTCCTCT--TATATATACCCCCCACCCCTGCAGCTGTGC-CGGGGGAAAGCTG-------------GGCAGTTTCCCGCCTCCGAGCCCCTGTACATACCATGAACTGTGGGACCTTCAGAGCTTTTCACTTTTCTGAAAATAGCTCCTGCTGGGGCTACAAGATGGAGTGTGAAGAGGGCCTTGGGCCACAGGGAGGTGCCTGTGGAATAGGGGGAGTTCATGCACCCC-TTCTTTCCCCAGAGGGGCTGGACTCAGGTGAGTATGGGGGTGGGGGCTCCTGCACTTCAACACAGGCAGCGGGAGGGTTTTCTCCCCATTCCCTCTGCACTCCCAACTTGAGTTGTACTTTTT----AAGTGATTCACCCTGCCTTTGCCCCCTTCCCCAGAACAGAACACGCTGATCATGGGCGATATTTCTTATTGTGCCAAAAAGTTGCCATGACCGTCATTAAACCTG-TTAACACCAAATAATAAGGAAAATAAA----------------------ATAAAAAATTCGGGCTTGGTGCAGAAACTCACTCCAAATAAATTACCTACCAAAATATTTATATAATGGTGGAAAT-ATTTCAAAATTCCATA-TTTTGGGATTTATACAAAAAAGATAAAACAATTAGAGGCCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46745294 698 - 99891981 ctgatttcgat---ctgacatcgtgatccgcccgcccccgcctccaaaagtgctgggattacaggcgtgagccaccgtgcctggccAAGGCCTACTCCTCT--TATGTATACCCCCTACCCCTGCAGCTGTGC-CGGGGGAAAGCTG-------------GGCAGTTTCCCTCCTCAGAGCCCCTGTACCTACCATGCAGTGGGGGACCTTCAGAGCTTTTCACTTTTTGGAAAATAGCTCCTGCTGGGGCTACAAGATGGAGTGTGAAGAGGGCCTTGGGCCACAGGGAGGGGCCTGTGGAATAGCGGGAGTTCATGCACCCT-TTCTTTCACCAGAGGGGCTGGACTCAGGTGAGTATGGGGGTGGGGACTCCTGCACTTTGACACAGGCAACGGGAGGGTTTTCTCCCCATTCCCTCTGCATTCCCAACTTGAGTTGTACTTTTTAAGAAAGTGATTCTCCCTGCCTTTGCCCCCTTCCCCAGAACAGAACACGTTGATCATGGGTGATATTTTTTATTGTGCCGAAAACTTGCCATGACTGTCATTAAAGCAGTTTAACACCAAATAATAATGAAAATAAA----------------------ATAAAAACTTAGGGCTTGGTACAGAAAATCAGTACAAATTAATTAACTACCAAAATATTTATATAACGGTGGAAAT-ATTCCAAAATTCCATA-TTTTGGAATTTATACACAAAAGATAAAAAAATTAGAGGCCA i nomLeu3.chr17 I 7 C 0 s macFas5.chr3 127671463 742 - 192294377 ctggtctcgatctcctgaccttgtgatcctcccacctctgcctcccaaagtgctgggattacaggtgtgagccaccgcacctggccAAGGCCTGCTCCTCTTATATATATACCCCCTACCCCTGCAGCTGTGAGAGGGGGAGAGCTGGGGGACCTGCAGCGGCAGTTTCCCTCCTCCCAGCCCCTGTACATAACTTGGAGTGTGTGACCTTCAGAGCTTTCCACTTAATGCAAAATAGCTCCTGCCAGGGCTGCAAGATGGAGTATGGTGCGGGCCTTGGGCCACAGGGAGGCACCTGTGGAACAGGGGGAGTTCATGCACCCCTTTTTTTCCCCAGAGGGGCCGGACTCAGCTTAGTTTGGGGGTGGGGGCTCCTGCACTTTGCTACAGGCACCAGGAGGGTTTCCTCCCCATCCCCTCTGCCCTCCCAACTTGAGTTGTACTTTTTAAGAAGGTGATTCCCCCTGCCTTTGCCCCCGTCCCCAGAACAGAACATGTTGATCATGTGAGATATTTTTTATTGTGCCGAGAAGTTGCAATGACCGACATTAAAGCTGTTTAACACCAAATAATAATAATGTAAAACTtgacctcacgctggtttggcatgatctgttggggcctggtgcggaaactcattctgaaataattacctcccagaatttttatataaTGGTGGCTGCAATTCCAAAATTCCATACTTTTGGAATTTATACACAAAAGATAAAAAAATTAGAggcca i macFas5.chr3 C 0 I 5189 a score=350926.000000 s hg38.chr17_GL383563v3_alt 1762 281 + 375691 AGAGGCTGCCGGAAGGGAAAAACGGGGCCTGGAATGGCCGAC----GTGAGGAATGAGC----TGGGCCTAAAGAGGCCACTGGCAGGCAGGAGCTGGACCTGCCGAAGTGGCCGAAAGGC---AGGAGCTTTGGACTGGGGAGGCCGCAGTGAGACGAGAGCTAGCTGGGCGTGGAGAGTCCGCTGTGAGGCCGAGG------------------------------------------------CCGAGGCC------GGGCCCGTGCAGGCCTTCGAG---------------------------------------------------------------------AGGCAGGAG--GCCGGGCCTGCAAAGGCCGCCTGGAGATCAAGTTCTGCGCCTGAAGAGGCTGCCAA s panTro4.chr17 64211 287 + 82630442 AGAGGCTGCCGGAAGAGAAAAACGGGGCCTGGAAAGGCCGTT----GTGAGGAATGAGC----TGGGCCTAAAGAGGCCACTGGCAGGCAGTAGCTGGACCTGCCGAAGTGGCCAAAAGGC---AGGAGCTTTGGACTGGGGAGGCCGCAGTGAGGCGAGAGCTAGCTGGGCGTGGAGAGTCCGCTGTGAGGCCGAGG------------------------------------------------CCGAGGCCAAGGCTGGGCCCGTGCAGGCCTTCGAG---------------------------------------------------------------------AGGCAGGAG--GCCGGGCCTGCAAAGGCCGACTGGAGATCAAGTTCTGCTCCTGCAGAGGCCGCCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757449 279 - 72422247 AGAGGCTGCCGGAAGGGAAAAACGGGGCCTGGAAAGGCCGTT----GTGAGGAATGAGCCCCATGGGCCTGAAGAGGCCACCGGCAGGCGGGAGCTGGGCCTGCCAAAGCGGCCGAGAGGC---AGGAGCTTTGGACTGGGGAGGCTGCAGTGAGGCGAGAGCTAGCTGGGTGTGGAGAGTCCGCTGTGAGGCCGAGG------------------------------------------------CC------------AGGCCCGTGCAGGCCTTCGGG---------------------------------------------------------------------AGGCAGGAG--GCCGGGCCTGCAAAGGCCGACTGGAGGTCAAGTTCTGGGCCTGAAGAGGCCGCCAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46745992 275 - 99891981 AGAGGCTGCCGGAAGGGAAAAACGGGGCCCAGAAAGGCCATT----GTGAGGAATGAGG----TGGGCCTGAAGAGGCCACTGGCAGGTGGGAGCTGGGTCTGCCGAAGTGGCCGAAAGGC---AGGAGCTTTGGACCGGGGAGGCCGCAGTGACGCGAGGGCTAGCTGGACTTGGAGAGTCCGCTGGGAGGCAAAGG------------------------------------------------CC------------GGGCCTGTGAAGGCCCTCGGA---------------------------------------------------------------------AGGCAGGAG--GCTGGGCCTGCAGAGGCTGACTGGAGGTCAAGTTCTGGGCCAGAAGAGGCTGCCAA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59760290 270 + 198365852 AGAGGCTGCCAAAAGGGAAAAACTGGGCCTGGAAAGGCCATT----GTAAGGAATGAGC----TGGGCCCAAAGAGGCCATTGAAAGGCAGAAGCTGGGCTTGTCAAAGTTGCCAAAAGGC---AGGAGTTTTGGACTAGTGAGGCTACAGTGAGGCAAG----AGCTGGGCGTGGAGAGTCCACTGTGAGGCAGAGG------------------------------------------------TT------------GGGCCTGTACAGGCCTTCAGA---------------------------------------------------------------------AGGCAGGA---GCTGGGCCTGGAGAGGCCGACTTCATGTCAAGTTCTGGGCCTGAAGAGGCCACCAA i rheMac3.chr3 N 0 C 0 s macFas5.chr3 127677394 278 - 192294377 AGAGGCCGCTAAAAGGCAAAGGCTAGGCCTGGAAAGGCCGTTCAACGTGACGAATGAGC----CGGGCCTAACGAGGCCACTGGGAGGCATGAGCGGGGCCCGGCGGAGCTGCCGAAAGGCAGGAGGAGCTCTGGCCTGGGGAGGCCGCAGTCAGGCAAG----AGCTGGGCGTGGAGAGTCCGCTGGGAGGCAGAGG------------------------------------------------CT------------GCGCCTGTGCAGGCCTTCGGG---------------------------------------------------------------------CGGCCGGAG--GCTTGGCGTGGGGAGGCCGACTGGAGGTCAAGTCCTGGGCCTGAGGAGACCGACCA i macFas5.chr3 I 5189 I 552 s papAnu2.JH684865 23954 395 - 317753 agaggccgccaaaaggcaAAGGCTGGGCCTGGAAAGGCCGTTCCCCATGACGAAtgagc----ggggcctagtgaggccactgggaggcaggagtgggGCCCGGCGGAACTGCCGAAAGGCAagaggagctctggcctggggaggccgcagtcaggcgag----agctgggcgtggagagtccgctgggaggcagaggccgggaggcaggaggctgcgCCTGGCGAGGCCtactggaggtcaagtcct------------gggcctgaggaggccgccAGATATAAGAAGCGCAGCCCGGAAAGGCCACCAAGAGGCATGAGCGGGGCTGGTCCTGAAGAGGCTGGtgccaggcaggaggagctgggcctggagagggcAGCCTGAGG--AAATTCTGGGGctggagaggccgccaa i papAnu2.JH684865 N 0 C 0 a score=13312.000000 s hg38.chr17_GL383563v3_alt 2043 13 + 375691 AAGTCAAAAGCGG s panTro4.chr17 64498 13 + 82630442 AATTCAAAAGCGG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757728 13 - 72422247 AAGTCAAAAGCAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746267 13 - 99891981 AAGTCAAAAGCGG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59760560 13 + 198365852 AAGTCAAAAGCAG i rheMac3.chr3 C 0 C 0 s papAnu2.JH684865 24349 13 - 317753 aaggcaAAGACTG i papAnu2.JH684865 C 0 I 36 e macFas5.chr3 127677672 552 - 192294377 I a score=44581.000000 s hg38.chr17_GL383563v3_alt 2056 35 + 375691 GGCCTGGGAAGGCCGCCGAGAGCCATGAGCTGGGC s panTro4.chr17 64511 35 + 82630442 GGCCTGGGAAGGCCGCCGAGAGCCATGAGCTGGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757741 35 - 72422247 GGCCTGGGAAGGCCGCCGAGAGCCATGAGCTGGGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746280 35 - 99891981 GGGCTGGGAAGGCCGCTGAGAGGCATGAGCTGGGC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59760573 26 + 198365852 GGCCTGGGAAGGCCACCGAGAGGCAT--------- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127678224 35 - 192294377 GGCCTGAGGAAGCCGCCCAGAGGTGTGAGCGGGGC i macFas5.chr3 I 552 C 0 s papAnu2.JH684865 24398 35 - 317753 GGCCTGaagaggccactgggaggcagaagcggggC i papAnu2.JH684865 I 36 I 543 a score=30129.000000 s hg38.chr17_GL383563v3_alt 2091 26 + 375691 TGGGCCGAAAGAGGCCACTGGGAGGC s panTro4.chr17 64546 26 + 82630442 TGGGCCGAAAGAGGCCACTGGGAGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757776 26 - 72422247 TGGGCTGAAAGAGGCCACTGGGAGGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746315 26 - 99891981 TGGGCCGAAAGAGGCCACTGGGAGGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678259 26 - 192294377 TGGGCCTCAAGAGGCCAGTGGCAGGC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 24976 26 - 317753 TGGTCCTAAAGAGGCCACAGGGAGGC i papAnu2.JH684865 I 543 C 0 e rheMac3.chr3 59760599 0 + 198365852 C a score=66861.000000 s hg38.chr17_GL383563v3_alt 2117 38 + 375691 AGGAGGAGCTGGGCCTGGAGAGGCTGACTCGAGGAAGT s panTro4.chr17 64572 35 + 82630442 AGGAG---CTGGGCCTGGAGAGGCTGACTCGAGGAAGT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757802 38 - 72422247 AGGAGGAGCTGGGCCTGGAGAGGCTGACTCGAGGAAGT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746341 38 - 99891981 AATAGGAGCTGGGCCTGGAGAGGCTGACTCAAGGAAGT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59760599 33 + 198365852 -----GAGCTGGGCCTGGACAGGCTGACAGGAGAAAGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127678285 38 - 192294377 AGGAGGAGCTGGGCCTGGAGGGGCTGACCTGAGGAAGT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25002 35 - 317753 AG---GAGTTGGTCCTGGAGAGGCCGAATTGAGGACAA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124136449 38 - 127223203 AGGAGGAGCTGGGCCTGGAGAGGCTGGCTGGAGGAAGT i chlSab2.chr21 N 0 I 100 a score=16719.000000 s hg38.chr17_GL383563v3_alt 2155 18 + 375691 TTTGCACCTGGAGAGGCC s panTro4.chr17 64607 18 + 82630442 TTTGCACCTGGAGAGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757840 18 - 72422247 TTTGCACCTGGAGAGGCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746379 18 - 99891981 TTTGTACTGGAAGAGGCC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59760632 18 + 198365852 TTTGCACCTGGAGAGGCC i rheMac3.chr3 C 0 I 90 s macFas5.chr3 127678323 18 - 192294377 CTGGCAGCTGGAGAGGCT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25037 7 - 317753 TTTGGAT----------- i papAnu2.JH684865 C 0 C 0 e chlSab2.chr21 124136487 100 - 127223203 I a score=31389.000000 s hg38.chr17_GL383563v3_alt 2173 36 + 375691 GTCGAGAGGACGGAGCTGGGCCCAGGGAGGCCGACT s panTro4.chr17 64625 36 + 82630442 GCCGAGAGGACGGAGCTGGGCCCGGGGAGGCTGACT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757858 36 - 72422247 GCCAAGAGGACGGAGCTGGGCCCGGGGAGGCTGACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746397 36 - 99891981 GACGAGAGGCCGGAGCTAGGCCTGAAGAGCTTGGCT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678341 36 - 192294377 GCGGAGAGGCAGGAGCTGGGCCGGCAGAGACCGACT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25044 35 - 317753 GCTGGGAGG-AAGAGCTGGGCCTAGAGAGACCGACT i papAnu2.JH684865 C 0 I 79 e chlSab2.chr21 124136487 100 - 127223203 I e rheMac3.chr3 59760650 90 + 198365852 I a score=2313.000000 s hg38.chr17_GL383563v3_alt 2209 24 + 375691 TGCTGCTCTTCCAGGCCCAC---TTCC s panTro4.chr17 64661 24 + 82630442 TGCTGCTCTTCCAGGCCCAC---TTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757894 24 - 72422247 TGTAGCTCTTCCAGGCCCAC---TTCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746433 22 - 99891981 GGAGAAAGTTTGGGGCCTAC-----AA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678377 27 - 192294377 GGGCGACGAGTTGGGCCCGCAGGGTCC i macFas5.chr3 C 0 I 26 e chlSab2.chr21 124136487 100 - 127223203 I e papAnu2.JH684865 25079 79 - 317753 I e rheMac3.chr3 59760650 90 + 198365852 I a score=10018.000000 s hg38.chr17_GL383563v3_alt 2233 8 + 375691 AGGCCGAC s panTro4.chr17 64685 8 + 82630442 AGGCCGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757918 8 - 72422247 AGGCCAAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746455 8 - 99891981 AGGCCGAT i nomLeu3.chr17 C 0 I 173 s rheMac3.chr3 59760740 8 + 198365852 AGGCCAAC i rheMac3.chr3 I 90 C 0 s macFas5.chr3 127678430 8 - 192294377 AGGCCGAC i macFas5.chr3 I 26 C 0 e chlSab2.chr21 124136487 100 - 127223203 I e papAnu2.JH684865 25079 79 - 317753 I a score=910.000000 s hg38.chr17_GL383563v3_alt 2241 1 + 375691 T s panTro4.chr17 64693 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757926 1 - 72422247 T i ponAbe2.chrUn C 0 C 0 s rheMac3.chr3 59760748 1 + 198365852 T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127678438 1 - 192294377 T i macFas5.chr3 C 0 C 0 e chlSab2.chr21 124136487 100 - 127223203 I e papAnu2.JH684865 25079 79 - 317753 I e nomLeu3.chr17 46746463 173 - 99891981 I a score=11830.000000 s hg38.chr17_GL383563v3_alt 2242 15 + 375691 TGAGGACGACTTGGG s panTro4.chr17 64694 15 + 82630442 TGAGGATGACTTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757927 15 - 72422247 TGAGGACGACTTGGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746636 15 - 99891981 TGAGGACGCGTTGCT i nomLeu3.chr17 I 173 C 0 s rheMac3.chr3 59760749 15 + 198365852 TGAGGACGATTTGGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127678439 15 - 192294377 CGAGGCCAGCGTGGG i macFas5.chr3 C 0 C 0 e chlSab2.chr21 124136487 100 - 127223203 I e papAnu2.JH684865 25079 79 - 317753 I a score=46343.000000 s hg38.chr17_GL383563v3_alt 2257 48 + 375691 CCTGCAGAGGCCGCCGGGAGGCTGGAGCTAAGCCTGGAGAGACTGACT s panTro4.chr17 64709 22 + 82630442 CCTGCAGAGGCCGCCGGGAGGC-------------------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67757942 48 - 72422247 CCTGCAGAGGCCGCCGGGAGGCCGGAGCTGGCCCTGGAGAGACCGACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46746651 48 - 99891981 CCTGGGGAGGCCGCCAGGAGGCTGGAGCTGGGCCTGGAGAGGCCGACT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59760764 47 + 198365852 CCTGCAGAGGTTGCTGGGAGG-AAGAGCTAGGCCTGGAGAGGCTGACT i rheMac3.chr3 C 0 I 689 s macFas5.chr3 127678454 47 - 192294377 CCTGCAGAGGCCACTGGGAGG-AGGAGCTGGGCCTGGAGAGGCCGACT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25158 46 - 317753 CCTACACAG--CACTGGGAGGCAGGACCTGGGCCTGCAGAGGCTGAAT i papAnu2.JH684865 I 79 C 0 e chlSab2.chr21 124136487 100 - 127223203 I a score=21114.000000 s hg38.chr17_GL383563v3_alt 2305 36 + 375691 TCGGGACGATTTGGGCCTGCAGAGGCCGCCGGGAGG s ponAbe2.chrUn 67757990 36 - 72422247 CAAGGGCAGTCTGGGCCTGCAGAGGCTGCCAGGAGG i ponAbe2.chrUn C 0 I 831 s nomLeu3.chr17 46746699 36 - 99891981 TCAGGACGACTTGGGCTTGCAGAGGCCACCGGGAGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678501 36 - 192294377 CGAGGCCAGCGTGGGCCTGCTGCGGTCGCCGGGAGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25204 36 - 317753 TCAGGATGATTTGGGCCTGCAGAGGCCTTTGGGAGG i papAnu2.JH684865 C 0 C 0 e chlSab2.chr21 124136487 100 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e panTro4.chr17 64731 0 + 82630442 C a score=33643.000000 s hg38.chr17_GL383563v3_alt 2341 79 + 375691 CCCAAGCTGGGCCTAGAGGAGCCCACCGACCGGAGGCCATTTGGGGCCTGCAGATGTCATCGGAGGGCCAGGAGCTGAG s panTro4.chr17 64731 77 + 82630442 -CCAAGCTGGGCCTAGAAGAGCCCACCGACCGGAGGCCATTTGGGGCCTGCAGATGCCATCGGAGGGC-AGGAGCTGAG i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46746735 78 - 99891981 CCCAAGCTGGGCCCAGAGCAGCCCACCGACCAGAGGCCATTTGGGGCCTGGAGACGCAGTCGGAGGGC-AGGAGCTGAG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678537 73 - 192294377 -AGGAGCTGGGCCTGGAGAGG----CTGGCTGCAGGAAGTCTGGGGCGTGGAGACGCCGTCGGAGGGC-AGGAGCCGGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25240 73 - 317753 -AAGATCTTGGCCTGGACATG----CTGAATGGAGGAAGTTTTGGGCCTGGAGTATGCGTCAAAAAGC-ATAAGTTAAA i papAnu2.JH684865 C 0 C 0 e chlSab2.chr21 124136487 100 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67758026 831 - 72422247 I a score=17332.000000 s hg38.chr17_GL383563v3_alt 2420 41 + 375691 CCTGGAGAGGCCACCGCGAGGCCTGAGCTGGGCCTGGGGAG------------------ s panTro4.chr17 64808 27 + 82630442 CCTGGAGAGGCCACCGTGAGGCCTGAG-------------------------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67758857 41 - 72422247 CCTGGAGAGGCCGCCGAGAGGACGGAGCTGGGCCCGGGGAG------------------ i ponAbe2.chrUn I 831 I 504 s nomLeu3.chr17 46746813 41 - 99891981 CCTGGAGAGGCCACCGTGAGGCCTGAGCTGGGCCTGGAAAA------------------ i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678610 34 - 192294377 CCCGGAGAGGCCACCGTG------GGGCCCGGCTT------------------CAGGA- i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25313 59 - 317753 CTAGGAAAGGCCACCGGGACACATGAGCTTGGCCTACAGAGTCCATTGTGAGGCAGGAG i papAnu2.JH684865 C 0 C 0 e chlSab2.chr21 124136487 100 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I a score=-1164.000000 s hg38.chr17_GL383563v3_alt 2461 37 + 375691 CTTGGCTTAGGGAAGT--------TGTGGGCCTACCAGGGCCGCT---- s nomLeu3.chr17 46746854 42 - 99891981 -GCCGTTGTGAGGAATGA--GCCGCATAGGCCTAAAGAGGCCACT---- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678644 28 - 192294377 ---CGTTTG------------------GGGCCTACAAAGGCCGCGGAGC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25372 49 - 317753 CTTCACTTGAGGAGGCCATGATCAGGTGGGCCTGGAAGGGCCACTGTGT i papAnu2.JH684865 C 0 C 0 e chlSab2.chr21 124136487 100 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67758898 504 - 72422247 I e panTro4.chr17 64835 0 + 82630442 C a score=-404.000000 s hg38.chr17_GL383563v3_alt 2498 10 + 375691 GGGAG----CTGGG s nomLeu3.chr17 46746896 6 - 99891981 GGCAG----G---- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678672 10 - 192294377 GGGAG----CCGGC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25421 14 - 317753 GGTAGAGTTTGGGC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124136587 10 - 127223203 GGGAG----CTGGG i chlSab2.chr21 I 100 C 0 e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67758898 504 - 72422247 I e panTro4.chr17 64835 0 + 82630442 C a score=8158.000000 s hg38.chr17_GL383563v3_alt 2508 13 + 375691 CA--------------------GGAGCTGAGTC s ponAbe2.chrUn 67759402 13 - 72422247 CA--------------------GGAGCTGAGTC i ponAbe2.chrUn I 504 C 0 s nomLeu3.chr17 46746902 13 - 99891981 CG--------------------GGAGCCGAGCC i nomLeu3.chr17 C 0 I 556 s macFas5.chr3 127678682 13 - 192294377 CC--------------------GGAGCCGAGCC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25435 33 - 317753 CTGTGTATGCTGACATGAGGTAGGAGCTGGGTT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124136597 13 - 127223203 CC--------------------GGAGCCGAGTC i chlSab2.chr21 C 0 C 0 e rheMac3.chr3 59760811 689 + 198365852 I e panTro4.chr17 64835 0 + 82630442 C a score=6771.000000 s hg38.chr17_GL383563v3_alt 2521 12 + 375691 CAAAGACGTTGT s panTro4.chr17 64835 7 + 82630442 -----ACGTTGT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759415 12 - 72422247 CAAAGAGGTTGT i ponAbe2.chrUn C 0 C 0 s macFas5.chr3 127678695 12 - 192294377 AAAGGAGGTTGT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25468 12 - 317753 GGAAGAGGCCAA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124136610 12 - 127223203 CAAAGAGGTTGT i chlSab2.chr21 C 0 I 44 e rheMac3.chr3 59760811 689 + 198365852 I e nomLeu3.chr17 46746915 556 - 99891981 I a score=-2592.000000 s hg38.chr17_GL383563v3_alt 2533 11 + 375691 TGGGACCTGGA s panTro4.chr17 64842 11 + 82630442 TGGGACCTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759427 5 - 72422247 TGGGA------ i ponAbe2.chrUn C 0 C 0 s macFas5.chr3 127678707 1 - 192294377 ------C---- i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25480 1 - 317753 ------C---- i papAnu2.JH684865 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e nomLeu3.chr17 46746915 556 - 99891981 I a score=32120.000000 s hg38.chr17_GL383563v3_alt 2544 57 + 375691 GTCGGGCCAGAGTCCGGCCTGGAGATGCAGCCAGGAG--GAAG-AGCTGGGCCCGGAGGG s panTro4.chr17 64853 57 + 82630442 GTCGGCCCAGAGTCCGGCCTGGAGATGCAGCCGGGAG--GAAG-AGATGGGCCCGGAGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759432 53 - 72422247 ----GGCCGGAGTCGGGCCTTGAGACGCAGCCGGGAG--GAAG-AACTGGGCCCGGGGAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46747471 58 - 99891981 GTGAGGCAGGAGCTGGGCCTGCAGACGCCACTCAGAG--GCAGAAGCCTGGCCCGAGGAG i nomLeu3.chr17 I 556 C 0 s macFas5.chr3 127678708 60 - 192294377 GTGAGGCCGGGGCTGGGCCCGCGGACGCAGCCGGGAGCAGGAGGAGCTGGGCCTGGATGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25481 57 - 317753 TTTTGG-AGAATTGGGGCCTGCAGAGGCTGCCAGGAG--GCAAGAGCTATCCCTGGAGAG i papAnu2.JH684865 C 0 I 10 e chlSab2.chr21 124136622 44 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I a score=16551.000000 s hg38.chr17_GL383563v3_alt 2601 51 + 375691 GGCGCCGGGAGGCTGCAAGTGGGTCT-GAGAGGCCAAC--TTGAG-------GAGGCCTGG s panTro4.chr17 64910 51 + 82630442 GACGCCGGGAGGCTGCAAGNGGGTGN-GAGAGGCCNNN--NNGNG-------GAGGCNNGG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759485 52 - 72422247 GACGCCGGGAGGCCGGAAGTGGGTCTGGAGAGGCCGAC--TTGAG-------GAGGCCCAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46747529 56 - 99891981 GCCACGGCGAGGCAACAGGTGGACCC-GGAGGGCCCACTGTTGAG----GTAGAGGCTGGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678768 59 - 192294377 GAGGCCGGGAGGCCGCGACTGGGCCTGGAGAGGCCGGC--CTGAGTAAGTTCGGGGCCTGG i macFas5.chr3 C 0 I 53 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I a score=1119.000000 s hg38.chr17_GL383563v3_alt 2652 5 + 375691 CCTCT s panTro4.chr17 64961 5 + 82630442 CNTNN i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759537 5 - 72422247 CCTCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46747585 5 - 99891981 CCTCT i nomLeu3.chr17 C 0 I 94 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I a score=-430.000000 s hg38.chr17_GL383563v3_alt 2657 11 + 375691 ----------GCCTCCCGCAT s panTro4.chr17 64966 11 + 82630442 ----------GCNTNNNGNAN i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759542 11 - 72422247 ----------GCCTCCCACAT i ponAbe2.chrUn C 0 I 50 s nomLeu3.chr17 53108463 21 + 99891981 GTGTCATGGCAGCTTCTGCAG i nomLeu3.chr17 n 94 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I a score=-114.000000 s hg38.chr17_GL383563v3_alt 2668 1 + 375691 T s panTro4.chr17 64977 1 + 82630442 G i panTro4.chr17 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e nomLeu3.chr17 53108484 0 + 99891981 C e ponAbe2.chrUn 67759553 50 - 72422247 I a score=7927.000000 s hg38.chr17_GL383563v3_alt 2669 30 + 375691 GCCCAGCTGTTCCTCCTGGCTGCATCTCCC------------ s panTro4.chr17 64978 30 + 82630442 GNCNAGNNGTTNNTCNTGGCTGCATCTCCC------------ i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759603 30 - 72422247 GCCCAGCTGTTCCTCCTGGCTGCGTCTCCC------------ i ponAbe2.chrUn I 50 I 13 s nomLeu3.chr17 53108484 42 + 99891981 GCCCAGCTCTTCCTCCTGGCTGAGTCTACAGGCACAACTATT i nomLeu3.chr17 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I a score=38.000000 s hg38.chr17_GL383563v3_alt 2699 1 + 375691 A s panTro4.chr17 65008 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 53108526 1 + 99891981 G i nomLeu3.chr17 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e ponAbe2.chrUn 67759633 13 - 72422247 I a score=97088.000000 s hg38.chr17_GL383563v3_alt 2700 270 + 375691 CCTCCCAGCAAACAAGCTCTTTTGGCTCAGCTCCCGCCT-----------GCCTTTGTAGACCCCGAAGTTTCTGCAACCAAGCTCTTCAGACCCACATCCCTTCTCCCAGTGA-CTGAACAGTCCCAGCTCCGGCTGGAGAAGGGCGTCTGCAGACCCCGCTGTTGCCTCCCAGGGGAGTCTCCAGGCCCAGCTCTCGCCCCACCGCGACCTCCCAGGCCCAAGTCCCTGCCTACCTCCCAGCAGCCCGAGTGCGATCCTGTTCCTCCCTCACGGTGGCCT s panTro4.chr17 65009 270 + 82630442 CCTCCCAGCAAACAAGCTCTTTTGGCTCAGCTCCCGCCT-----------GCATTTGTAGACCCCGAAGTTTCTGCAACCAAGCTCTTCAGACCCACATCCCTTCTCCCAGTGA-CTGTACAGTCCCAGCTCCGGCGGGAGACCAGCGTCTGCAGACCCCGCTGTTGCCTCCCAGGGGAGTCTCCAGGCCCAGCTCTCGCCCCGCCGCGACCTCCCGGGCCCAAGTCCCTGCCTACCTCCCAGCAGCCCGCGTGCGACCCTGCTCCTCCCTCACGGTGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759646 269 - 72422247 CCTCCCAGCAAGCAAGCTGTTTTGGCTCAGCTCCCGTGG-----------GCATTTGTAGGCCCCAAAGTTTCTGTAGCCAAGCTCTTGAGGCCCACGTCCTGCCTCCCGGTGGCCTGTACAGGCCCAGCTCTGACTGGAGAAGAGCCACTGCAGGCCCCGCTGTTGCCTCCCA-GGGCCTCTCCAGGCCCAGCTCTCGCCCCACGGCAGCCTCCCGGGACCAAGTCCCTGCCTGCCTCCCAGCAGCCCG-GTGCGGCCCAGCTCCTCCCTCACAGTGGCCT i ponAbe2.chrUn I 13 C 0 s nomLeu3.chr17 53108527 277 + 99891981 CCTCAC----AACAACCTCTTTTGGCCCAGCTCCTGCCCAGCTCATGGCAGCCACTGTAGGCCCGAAACTTCCTCAAGTCAAACTCTCCAGGCCCACCTTCTGCTTCCCGGTGGCATGTACAGGCCAAGCTTTGACTTGACAACAGTCTCTGCAGGCCCCGCTCTTGCCTCCCAGGGGCCTCTCCAGGCCCAGGTCTTGCCTCACAGCAGCTGCCCCAGGCTGAGGTTCTGTCTGCCTGTCAGCAGCCTT-GAAAGGCACAGCTCCTCCCTCACACTGGCCT i nomLeu3.chr17 C 0 n 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I a score=1869.000000 s hg38.chr17_GL383563v3_alt 2970 8 + 375691 GTTGAGGC s panTro4.chr17 65279 8 + 82630442 GTTGAGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67759915 8 - 72422247 GTTCAGGC i ponAbe2.chrUn C 0 I 751 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e nomLeu3.chr17 53108804 0 + 99891981 I a score=9545.000000 s hg38.chr17_GL383563v3_alt 2978 127 + 375691 AGGGGGTCACGCTGACCTCTGTCCGCGTGGGAGGGGCCGGTGTGAGGCAAGGG-CTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGG s panTro4.chr17 65287 118 + 82630442 AGGGGCTCACGTTGACCTCTGTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCT---------- i panTro4.chr17 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e nomLeu3.chr17 53108804 0 + 99891981 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=6436.000000 s hg38.chr17_GL383563v3_alt 3105 182 + 375691 GAGGGGCCGGTGTGAGGCAAGGGCTCACACTGACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCACGTGGGAGGGGCCGGGGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGCGTGG---------------GAGGGGCTGGTGTGAGGCAAGGGCTCACACTGACCT s panTro4.chr17 65405 132 + 82630442 --------------------------------------CTCAGCATGGGAGGGGCCGGTGTGAGGCAAGGGGCTCACGCTGACCTCTGTCCGAATNNNNNNNNNNGGGG------------CTCTCGCTGACCTCTGTCCGTGTGG---------------GAGAGACCGGTGTGTGACAAGGGCTCACTCTGACCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46747684 166 - 99891981 GAGAGGCCAGTGTGAGGCAGGGGCTCACAA--------CTCTGGGCAG--GGTGCCAGAGGAATGAGTGGGGCCTAAACAGGCC----CCCATGAGGGAGGAGCTGGGC------------CAGTCGCGGGCTGCCGGGAGGCAGGCAGGGACTTGGCCCCGGGAGGCCGCCGTGGGTTGAGAGCT-----GGGCCT i nomLeu3.chr17 I 94 T 166 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=204.000000 s hg38.chr17_GL383563v3_alt 3287 12 + 375691 CTCTCAGCGTG-G s panTro4.chr17 65537 12 + 82630442 CTCTCAG-GTGAG i panTro4.chr17 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e nomLeu3.chr17 46747850 166 - 99891981 T e ponAbe2.chrUn 67759923 751 - 72422247 I a score=11019.000000 s hg38.chr17_GL383563v3_alt 3299 46 + 375691 GAGGAGCCAGTGTGAGGCAGGGGCTCACGCCTCTGGGCAGGGTACC s panTro4.chr17 65549 46 + 82630442 GAGGAGCCAGTGTGAGACAGGGGCTCACCTCTCTGGGCAGAGTGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46747684 46 - 99891981 GAGAGGCCAGTGTGAGGCAGGGGCTCACAACTCTGGGCAGGGTGCC i nomLeu3.chr17 T 166 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=657.000000 s hg38.chr17_GL383563v3_alt 3345 3 + 375691 AGA s panTro4.chr17 65595 3 + 82630442 TGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46747730 3 - 99891981 AGA i nomLeu3.chr17 C 0 C 0 s calJac3.chr2 1420383 3 + 204313951 AAA i calJac3.chr2 N 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25538 10 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=2144.000000 s hg38.chr17_GL383563v3_alt 3348 3 + 375691 GGC s panTro4.chr17 65598 3 + 82630442 GGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46747733 3 - 99891981 GGA i nomLeu3.chr17 C 0 C 0 s papAnu2.JH684865 25548 3 - 317753 GGC i papAnu2.JH684865 I 10 C 0 s calJac3.chr2 1420386 3 + 204313951 GGC i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e macFas5.chr3 127678827 53 - 192294377 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=33480.000000 s hg38.chr17_GL383563v3_alt 3351 44 + 375691 ATGAGTTGGGCATCAACAGGCCACCGTGAGGGAGGAGCTGGGCC s panTro4.chr17 65601 44 + 82630442 ATGAGTCGGGCATCAACAGGCCACCGTGAGGGAGATGCTGGGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46747736 44 - 99891981 ATGAGTGGGGCCTAAACAGGCCCCCATGAGGGAGGAGCTGGGCC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678880 44 - 192294377 ATGAGCCGGGCCTAACAAGGCCACTGGGAGGCAGGAGCGGGGCC i macFas5.chr3 I 53 C 0 s papAnu2.JH684865 25551 44 - 317753 ATGAGCTGGGCCTAAAGGGGCCATTGTGAGGCAGCAGCAGGACT i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1420389 43 + 204313951 AAGTGCGGGACACAAA-AGACCACCGTGAGAGAGGAGATGGGCC i calJac3.chr2 C 0 I 29 e chlSab2.chr21 124136622 44 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=28834.000000 s hg38.chr17_GL383563v3_alt 3395 56 + 375691 GCACGCGGGCTGCTGGGAGGCAGGCAGGGACTTGGCCCCGGGAGGCCGCCGTGGGG s panTro4.chr17 65645 56 + 82630442 GCACGCGGGCTGCTGGGAGGCAGGCAGGGACTTGGCCCCAGGAGGCCGCCGTGGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46747780 55 - 99891981 AGTCGCGGGCTGCCGGGAGGCAGGCAGGGACTTGGCCCCGGGAGGCCGCCGT-GGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678924 55 - 192294377 CGGCG-GAGCTGCCGAAAGGCAGGAGGAGCTCTGGCCTTGGGAGGCCGCAGTCAGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25595 55 - 317753 TGTCA-AGACTGCTGGGAGACAGGCAGATTTGTGGCCTGGGGAGGCTGCCGTGAGG i papAnu2.JH684865 C 0 I 84 e calJac3.chr2 1420432 29 + 204313951 I e chlSab2.chr21 124136622 44 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=24294.000000 s hg38.chr17_GL383563v3_alt 3451 82 + 375691 GCAAGAGCTGGGCCTGGAGAGGCCCCTGGGAGGCAAGGGCGGGGCCTGC------------------AGAGGCTGTTCT--------CCAACCAGTG--------CTAGAACTGTA s panTro4.chr17 65701 82 + 82630442 GCAAGAGCTGGGCCTGGAGAAGCCCCTGGGAGGCAAGGGCGGGGCCTGC------------------AGAGGCTGTTCT--------CCAACCAGTG--------CTGGGCCTGTA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46747835 82 - 99891981 TTGAGAGCTGGGCCTGGAGAGGCCCCTGCGAGGCAAGCGAGGGGCCTGC------------------AGAGGGTGTTCT--------CCAGCCAGAG--------CTGGGCCTCTA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127678979 115 - 192294377 -AGAGAGCTGGGCGTGGAGGGTCCGCTGGGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGCGGCAGGAGGCTGGGCCTGGCGAGGCCGACTGGAGGTCAAGTCCTGGGCCTGAG i macFas5.chr3 C 0 C 0 e calJac3.chr2 1420432 29 + 204313951 I e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25650 84 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67759923 751 - 72422247 I a score=67505.000000 s hg38.chr17_GL383563v3_alt 3533 133 + 375691 CAGGCCACCAGGAGGCAGGAGGTGGGCCCTCAGAGCTTGGCTGGAGAAA---------------------------------------------------------------------------GTTCAGGGCCTACAAAGGCGG----TTGGGAGCTGGGCAGGAGTTGAGCCAAAAGAGCTTGCTTACTTGCTGGGAGGCA----------------------------------------------------------------------GG-------------GCCGGGA s panTro4.chr17 65783 133 + 82630442 CAGGCCACCAGGAGGCAGGAAGTGGGCCCTCAGAGCTTGGCTGGAGAAA---------------------------------------------------------------------------GTTCGGGGCCTACAAAGGCGG----TTGGGAGCTGGGCAGGAGTTGAGCCAAAAGAGCTTGCTTACTTGCTGGGAGGCA----------------------------------------------------------------------GG-------------GCCGGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67760674 135 - 72422247 CAGGCCACCGGGAGGCAGGAGGTGGGCCTGAAGAGCTTGGCTGGAGAAA---------------------------------------------------------------------------GTTCGGGGCCTACAAAGGCCG----GTGGGAGCTGGGCAGGAGCTGAGCCAAAAGAGCTTG----CTTGCTGGGAGGCC----------------------------------------------------------------AGAGCTGG-------------GCCTGGA i ponAbe2.chrUn I 751 C 0 s nomLeu3.chr17 46747917 199 - 99891981 CAGGCCACCGGGAGGCAGGAGGTGGGCCTGAAGAGCTTGGCTGGAGAAA---------------------------------------------------------------------------GTTCGGGGCCTACAAAGGCTG----GCGGGAGCTGGGCAGGAGCTGAGCCAAAAGAGGTTG----CTTGCTGGGAGGCAGGAGCTGGGCCTGGAGGGGCCCTCGTTGAGGACGCACTGTGCCTGGAGAGGCTGCTGGGAGACTGGAGCTGG-------------GCCTGGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127679094 222 - 192294377 GAGGCCGCCCAGAGG-AGGAGCTGGGCCGGGAGAGGCTGGCTGGAGGAAGTCTCGGGCGTGGAGACGCCGTCGGCGGGCAGGAGCCGGGCCCGGAGAGGCCACCGTGGGGCCCGGCTTCAGGACGTTTGGGGCCTACAAAGGCCGCGGAGCGGGAGCTGGGCCGGAGCCGAGCCAAAGGAGGTTG--------TCGTGAGGCA----------------------------------------------------------------GGGGCTGGGCCCGCGGACGCAGCCGGGA i macFas5.chr3 C 0 I 571 e calJac3.chr2 1420432 29 + 204313951 I e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25650 84 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I a score=51287.000000 s hg38.chr17_GL383563v3_alt 3666 91 + 375691 GAGCCCGACTTCAGGACAACTTGGGCCTGCGGCGGTCGCCGGGAGGCCCAACCTTGGCGTGGAGGAGCCCACCGACCGGAGACCATTTGGG s panTro4.chr17 65916 91 + 82630442 GAGGCTGACTTCAGGACATCTTGGGCCTGCAGCGGTCGCCGGGAGGCCCAAGCCTGGCGTGGAGGAGCCCACCGACCGGAGACCATTTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67760809 91 - 72422247 GAGGCCGACTTCAGGACGACTTGGGCCTGCAGAGGTCGCTGGGAGGCCCAAGCTGGGCCTGGAGGAGCCCACCGACTGGACGCCATTTGGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748116 90 - 99891981 GAGGCCGAAGTCAGGACGACTTTGGCCTGCAGAGACCGCCGGGAGGCCCAAGCTGGGCCCAGAGGA-CCCACCGACCAGAGGCCATTTGGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127679887 86 - 192294377 GAGGCCGACTCGAGGTCAGCGTGGGCCTGCTGCGGTCACCGGGAGG-AGGAGCTGGGCCTGGAGAG----GCTGGCTGCAGGAAGTCTGGG i macFas5.chr3 I 571 C 0 e calJac3.chr2 1420432 29 + 204313951 I e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25650 84 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I a score=37594.000000 s hg38.chr17_GL383563v3_alt 3757 39 + 375691 GCCTGGAGATGCCATAGGAGGGCAGGAGCTCATCCTGGA s panTro4.chr17 66007 39 + 82630442 GCCTGGAGATGCCATCGGAGGGCAGGAGCTCATCCTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67760900 39 - 72422247 GCCTGGAGACGCCGTCGGAAGGCAGGAGCTGAACCTGGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748206 39 - 99891981 GCCTGGAGACGCCGTCGGAGGGCAGGAGCTGAGCCTGGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127679973 39 - 192294377 GCGTGGAGACGCCGTCGGAGGGCAGGAGCCGGGCCCGGA i macFas5.chr3 C 0 C 0 s calJac3.chr2 1420461 39 + 204313951 GCCTGAAGAGGCCACGGCGAGGCAGGAGCTCGGCTAAAA i calJac3.chr2 I 29 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e papAnu2.JH684865 25650 84 - 317753 I e rheMac3.chr3 59760811 689 + 198365852 I a score=148896.000000 s hg38.chr17_GL383563v3_alt 3796 148 + 375691 GAGGCCACCGTGAGGCCTGACC--------------------------------TGGGCCTGGGGAGCTTGGCTTGAGGAAGCTGTGGGCCGACCAAGGCCGC----CAGGAGATGGGTAGGCACTGAGTCCAAAGAGGTTGTTGAGAGGCAGGAATCGGGCCTGGAGACCCAACCAGGAAGAA s panTro4.chr17 66046 148 + 82630442 GAGGCCACCGTGAGGCCTGACC--------------------------------TGGGCCTGGGGAGCTTGGCTTGAGGAAGCTGTGGGCCGACCAAGGCCGC----CAGGAGATGGGTAGGCACTGAGTCCAAAGAGGTTGTTGAGAGGCAGGAGTCGGGCCTGGAGACGCAACCAGGAAGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67760939 148 - 72422247 GAGGCCACCGTGAGGCCTGAGC--------------------------------TGGGCCTGGGGAGCTTGGCTTGAGGAAGCTGTGGGCCGACCAGGCCCGT----CAGGAGCTGGGCAGGCGCTGAGTCCAAAGAGGTTGTTGGGAGGCAGGAGTCGGGCCTGGAGACGCAGCCAGGAGGAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748245 148 - 99891981 GAGGCCACCGTGAGGCCTGAGC--------------------------------TGGGCCTGGGGAGCTTGGCTTGAAGAAGCGGGGGGCCTACCAAGGCCGC----CAGGAGCTGGGCAGGAGCTGAGTCCAAAGAGGTTGTTGGGAGGCAGGAGCTGAGCCTGGAGACACAGCCGGGAGGAA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680012 132 - 192294377 GAGGCCACCGTGGGGCCCAG----------------------------------------------------CTTCAGGACGTTTGGGGCCTACAAAGGCCGCGGAGCGGGAGCTGGGCCGGAGCCGAGCCCAAAGAGGTAGTCGTGAGGTCAGGGCTGGGCCCGCGGCCGCAGCCGGGAGCAG i macFas5.chr3 C 0 I 3 s papAnu2.JH684865 25734 143 - 317753 GAGGCTGCCGGGAGGCCGAAGG--------------------------------TGGGCCTGGAAAGC----TTTAAAGAAGCCTCTGGCCTACAGAGGCTGC----CAGCAGCTCGGCAGGAGTTGGGCCAAAGGAAGTTGTTTTGAGGCAGGAAATGGGTCTGTAGATGCAGCCGGGAGAA- i papAnu2.JH684865 I 84 C 0 s calJac3.chr2 1420500 169 + 204313951 GAGGCTGCCGTGAAACAGAAGCTGCACCTTGAGAGGCGGACATGACACAGAGGATGGGCCTGGAAAGCCCGACCTGAGGAAGGCTGGGGCCTAC---------------GGAGCTGGGCAGGAGTGGGGCCAAACGTTGTCGTTGTGAGGCAGGAGCTGGGTCTGTAGATGCAGCCGGGAGGAA i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124136622 44 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I a score=22762.000000 s hg38.chr17_GL383563v3_alt 3944 15 + 375691 GAGCTGGGCCCGGAG s panTro4.chr17 66194 15 + 82630442 GGGCTGGGCCCAGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761087 15 - 72422247 GATCTGGGCCCGGAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748393 15 - 99891981 GAGCTGGGCCCGCAC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680147 15 - 192294377 GAGCTGGGCCTGGAC i macFas5.chr3 I 3 C 0 s chlSab2.chr21 124136666 15 - 127223203 GAGCTGGGCCTGGAC i chlSab2.chr21 I 44 C 0 s calJac3.chr2 1420669 15 + 204313951 GAGCTGGGCCCGGAG i calJac3.chr2 C 0 C 0 e papAnu2.JH684865 25877 0 - 317753 C e rheMac3.chr3 59760811 689 + 198365852 I a score=86741.000000 s hg38.chr17_GL383563v3_alt 3959 70 + 375691 AGGATGCCCGGAGGGTGCAAGTGGGTCTGGAGAGGCCGACTTGAGGAGGTTCTGGGCCCGGAGAGGCCGC s panTro4.chr17 66209 70 + 82630442 AGGACGCCCGGAGGGTGCAAGTGGGTCTGGAGAGGCCGACTTGAGGAGGTTCTGGGCCCGGAGAGGCCGC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761102 70 - 72422247 AGGAAGTCGGGAGGCTGCAAGTGGGTCTGGAGAGGCCAACCTGAGGAGGTTCTGGGCCTGGAGAGGCCGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748408 70 - 99891981 AGGACGCCGGGAGGCTGCAAGTGGGTCTGGAGAGGCCAACTTGAGGAGGTTCTGGGCCCGGAGAGGCCGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680162 69 - 192294377 GGGAGGCCGGGAGGCCG-AACTGGACCTTGAGGGGCCGGCCTGAGGAAGTTCGGGGCCTGGAGAGGGCGC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25877 54 - 317753 ---------------TG-AACTAGTCCCAGAGATGCCGAGTTGAGGACATTCTGGGCCTGGGCAGGCTGC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124136681 70 - 127223203 ACGAGGCCGGGAGGCCGCAACTGGGCCTGGAGAGGCCGGACTGAGGAAGTCCGGGGCCTGGAGAGGCCGC i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1420684 0 + 204313951 C e rheMac3.chr3 59760811 689 + 198365852 I a score=35313.000000 s hg38.chr17_GL383563v3_alt 4029 32 + 375691 CGGAAGGGAAAA-CTGGGCCTGGAAAGGCCGTT s panTro4.chr17 66279 33 + 82630442 TGGAAGGGAAAAACTGGGCCTGGAAAGGCCGTT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761172 33 - 72422247 CGGAAGGGAAAAACTGGGCCTGGAAAGGCCATT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748478 33 - 99891981 CGGAAGGGAGAAACTGGGCCTGGAAAGGCCGTT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680231 33 - 192294377 CAAAACGCAAAGGCTGGGCATGGAAAGGCCGCT i macFas5.chr3 C 0 I 4 s chlSab2.chr21 124136751 33 - 127223203 CGAAAGGCAAAGACTGGGCCTGGAAAGGCCGTT i chlSab2.chr21 C 0 I 114 e calJac3.chr2 1420684 0 + 204313951 C e papAnu2.JH684865 25931 0 - 317753 C e rheMac3.chr3 59760811 689 + 198365852 I a score=83149.000000 s hg38.chr17_GL383563v3_alt 4061 115 + 375691 GTCAGGAATGAGCCCCATGGGCCTGAAGAGGCCACTGGCAGGCGGGAGCTGGGCCTGCCGAAGCGGCCGAGAGGC---AGGAGCTTTGGACTCGGGAGGCCGCAGTGAAGCAACAGCT s panTro4.chr17 66312 115 + 82630442 GTGAGGAATGAGCCCCATGGGCCTGAAGAGGCCACCGGCAGGCGGGAGCTGGGCCTGCCGAAGCAGCCGAGAGGC---AGGAGCTTTGGACTCGGGAGGCCGCAGTGAGGCGACAGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761205 115 - 72422247 GTGAGGAATGAGCCCCATGGGCCTGAAGAGGCCATTGGCAGGCGGGAGCTGGGCCTGCCGAAGCGGCTGAGAGGC---AGGAGCTTTGCACTGGGGAGGCTGCAGTGAGGCGAGAGCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748511 115 - 99891981 GTGAGGAATGAGCCCCATGGGCCTGAAGAGGCCACTGGCAGGCGGGAGCTGGGCCTGCCGAAGCGGCCGAGAGGC---AGGAGCTTTGGACCGGGGAGGCTGCAGTGACGCGAGAGCT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680268 110 - 192294377 GTGATGAATGAGCC----GGGCCTAACGAGGCCACTGGGAGGCAGGAGCGGGGCCCGGCGGAGCTGCCGAAAGGCAGGAGGAGCTCTGGCCTGGGGAGGCCGCAGTCAGGCGAG---- i macFas5.chr3 I 4 C 0 e calJac3.chr2 1420684 0 + 204313951 C e chlSab2.chr21 124136784 114 - 127223203 I e papAnu2.JH684865 25931 0 - 317753 C e rheMac3.chr3 59760811 689 + 198365852 I a score=93586.000000 s hg38.chr17_GL383563v3_alt 4176 75 + 375691 AGCTGGGCGTGGAGAGTCCGCTGTGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGAGGCAGGAGGCTGGGCCT s panTro4.chr17 66427 75 + 82630442 AGCTGGGCGTGGAGAGTCCACTGTGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGAGGCAGGAGGCTGGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761320 75 - 72422247 AGCTGGGTGTGGAGAGTCCACTGTGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGAAGCAGGAGGCCGGGCCT i ponAbe2.chrUn C 0 I 27 s nomLeu3.chr17 46748626 75 - 99891981 GGCTGGGCGTGGAGAGTCCGCTGTGAGGCAGAGGTTGGGCCTGTGCAAGCCTTCGGGAGGCAGGAGGACGGGCCT i nomLeu3.chr17 C 0 I 5 s macFas5.chr3 127680378 74 - 192294377 AGCTGGGCGTGGAGAGTCCGCTGGGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGCAACAGGAGGCTGGGCC- i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124136898 75 - 127223203 AGCTGGGCGTGGACAGTCCGCTGTGAGGCAGAGGCTGCGCCTGTGCAGGCCTTCGCGAGGCAGGAGGTTGGGCCT i chlSab2.chr21 I 114 I 2865 e calJac3.chr2 1420684 0 + 204313951 C e papAnu2.JH684865 25931 0 - 317753 C e rheMac3.chr3 59760811 689 + 198365852 I a score=1560.000000 s hg38.chr17_GL383563v3_alt 4251 6 + 375691 TGTCGA s panTro4.chr17 66502 6 + 82630442 TGTCAA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46748706 6 - 99891981 GGCCGA i nomLeu3.chr17 I 5 I 9 s macFas5.chr3 127680452 6 - 192294377 TGGCGA i macFas5.chr3 C 0 C 0 e calJac3.chr2 1420684 0 + 204313951 C e chlSab2.chr21 124136973 2865 - 127223203 I e papAnu2.JH684865 25931 0 - 317753 C e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761395 27 - 72422247 I a score=7101.000000 s hg38.chr17_GL383563v3_alt 4257 17 + 375691 GGCCTGCAGAGGCCACC- s panTro4.chr17 66508 17 + 82630442 GGCCTGCAGAGGCCACC- i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761422 17 - 72422247 GGCCTGCAGAGGCCGCC- i ponAbe2.chrUn I 27 C 0 s nomLeu3.chr17 46748721 17 - 99891981 GGCCTGAAGAGGCTGCC- i nomLeu3.chr17 I 9 C 0 s macFas5.chr3 127680458 8 - 192294377 ----------GGCCGACT i macFas5.chr3 C 0 C 0 e calJac3.chr2 1420684 0 + 204313951 C e chlSab2.chr21 124136973 2865 - 127223203 I e papAnu2.JH684865 25931 0 - 317753 C e rheMac3.chr3 59760811 689 + 198365852 I a score=49440.000000 s hg38.chr17_GL383563v3_alt 4274 57 + 375691 GAAAGTCAAAAGCGGGGCTTGGGAAGGCCGCCGGGAGGCATGAGCTGGGCTGGGCTG s panTro4.chr17 66525 57 + 82630442 GAAAGTCAAAAGTGGGGCTTGGGAAGGCCGCTGGGAGACATGAGCTGGGCTGGGCCG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761439 57 - 72422247 GAAAGTCAAAAGCCGGGCCTGGGAAGGCCACCGGGAGGCATGAGCTGGGCTGGGCTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748738 57 - 99891981 AAAAGTCAAAAGCGGGGCCTGGGAAGGCCACTGAGAGGCATGAGCTGGGCTGGGCCG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680466 57 - 192294377 GCAGGTCAAGTCCTGGGCCTGAGGAGGCCGCCCAGAGGCGTGAGCGGTGCTGGGCCT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25931 52 - 317753 AAAAGGCAAAATCTGTGCCTGGAAAAGTCGCCATGGGGCATGA-----GCTTGGCCT i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1420684 0 + 204313951 C e chlSab2.chr21 124136973 2865 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I a score=49058.000000 s hg38.chr17_GL383563v3_alt 4331 37 + 375691 AAAGAGGCCACTGGGAGGCCGGAGGAGCTGGGCCTGG s panTro4.chr17 66582 37 + 82630442 AAAGAGGCCACTGGGAGGCAGGAGGAGCCGGGCCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761496 37 - 72422247 AAAGATGCCACTGGGAGGCAGGAGCAGCTGGGCCTGG i ponAbe2.chrUn C 0 I 309 s nomLeu3.chr17 46748795 37 - 99891981 ATAGAGGCCACTGGGAGGCAGGAGGAGCTGGGCCTGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680523 37 - 192294377 CAAGAGGCCAGTGGCAGGCAGGAGGAGCTGGGCCTGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 25983 34 - 317753 AAAGAGGCCATTGGAAGGCAGGAGA---TGGCCCTGT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124139838 34 - 127223203 AAAGAGGCCACTGCAAGGCAGGAGA---TGGCCCTGT i chlSab2.chr21 I 2865 C 0 e calJac3.chr2 1420684 0 + 204313951 C e rheMac3.chr3 59760811 689 + 198365852 I a score=5190.000000 s hg38.chr17_GL383563v3_alt 4368 3 + 375691 AGA s panTro4.chr17 66619 3 + 82630442 AGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761842 3 - 72422247 AGA i ponAbe2.chrUn I 309 C 0 s nomLeu3.chr17 46748832 3 - 99891981 AGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680560 3 - 192294377 AGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 26017 3 - 317753 AGA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124139872 3 - 127223203 AGA i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1420684 0 + 204313951 C e rheMac3.chr3 59760811 689 + 198365852 I a score=1219.000000 s hg38.chr17_GL383563v3_alt 4371 1 + 375691 G s panTro4.chr17 66622 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761845 1 - 72422247 G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748835 1 - 99891981 G i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127680563 1 - 192294377 G i macFas5.chr3 C 0 I 559 s papAnu2.JH684865 26020 1 - 317753 A i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124139875 1 - 127223203 A i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1420684 1 + 204313951 G i calJac3.chr2 C 0 C 0 e rheMac3.chr3 59760811 689 + 198365852 I a score=15856.000000 s hg38.chr17_GL383563v3_alt 4372 8 + 375691 GCTGCCGA s panTro4.chr17 66623 8 + 82630442 GCTGCCGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761846 8 - 72422247 GCTGCTGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46748836 8 - 99891981 GCCACTGA i nomLeu3.chr17 C 0 I 34130 s macFas5.chr3 127681123 8 - 192294377 GCTGCCGA i macFas5.chr3 I 559 C 0 s papAnu2.JH684865 26021 8 - 317753 GCTGCCGA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124139876 8 - 127223203 GCTGCCGA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1420685 8 + 204313951 ATTGCCGG i calJac3.chr2 C 0 C 0 e rheMac3.chr3 59760811 689 + 198365852 I a score=29443.000000 s hg38.chr17_GL383563v3_alt 4380 18 + 375691 AAGGCAGGA----GCTTCGCCT s panTro4.chr17 66631 18 + 82630442 AAGGCAGGA----GCTTCGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761854 18 - 72422247 AAGGCAGGA----GCTTGGCCT i ponAbe2.chrUn C 0 I 44 s nomLeu3.chr17 46782974 18 - 99891981 AAGGCAGGA----GCTTGGCCT i nomLeu3.chr17 I 34130 C 0 s macFas5.chr3 127681131 22 - 192294377 AAGGCAGGAGGAGCTCTGGCCT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 26029 18 - 317753 AAGGCAGGA----TCTTCACCT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124139884 18 - 127223203 AAGGCAGGA----TCTTCACCT i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1420693 18 + 204313951 GAGGTAGCA----CCTGCGCCT i calJac3.chr2 C 0 C 0 e rheMac3.chr3 59760811 689 + 198365852 I a score=49979.000000 s hg38.chr17_GL383563v3_alt 4398 44 + 375691 GAGGATGCCACAG----TGAGACACCATCTGGGTCTGGAGGGTCCACT s panTro4.chr17 66649 44 + 82630442 GAGGATGCCACAG----TGAGACACCATCTGGGTCTGGAGGCTCCACT i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46782992 44 - 99891981 GAGAATTCCACAG----TGAGATACGATCTGGGTCTGGAGGATCTACT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127681153 44 - 192294377 GGGGAGGCCGCAG----TCAGGCGAGAGCTGGGTGTGGGGAGTCCGCT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 26047 44 - 317753 GAGGATGCCACAG----TAAGACATGATCTGGGTCTGGAGAGTCCAct i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124139902 44 - 127223203 GAGAATGCCACAA----TAAGACATGATCTGGATCTGGAGGGTCCACT i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1420711 48 + 204313951 GGAGGGGCCATGAAAGCAGAAGCACGATCTGGGTCCAGAGAGACCTCT i calJac3.chr2 C 0 C 0 e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=41980.000000 s hg38.chr17_GL383563v3_alt 4442 49 + 375691 GTGAGGCAGAGGCT-GACCTGTAGAGTCCGACAGTAGACA-GAAGTTGGGC s panTro4.chr17 66693 49 + 82630442 GTGAGGCAGAGGCT-GGCCTGTAGAGTCCGACAGTAGACA-GAAGTTGGGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783036 41 - 99891981 GTGAGGCAGAG---------GTAGAATGTGACAGTAGGCA-GGAGTTTGGC i nomLeu3.chr17 C 0 I 3 s macFas5.chr3 127681197 51 - 192294377 GGGAGGCAGAGGCTGGGCCTGTGCAGGCCTTCGGGCGGCAGGAAGCTGGGC i macFas5.chr3 C 0 I 323 s papAnu2.JH684865 26091 49 - 317753 gtgaggcagaggct-ggcCTGTAGAGTCCGACAGTAGACA-GAAGGTGGGC i papAnu2.JH684865 C 0 I 3 s chlSab2.chr21 124139946 49 - 127223203 GTGAGGCAGAGGCT-GGCCTGTAGAGTCCGACAGTAGACA-GAAGGTGGGC i chlSab2.chr21 C 0 I 3 e calJac3.chr2 1420759 0 + 204313951 C e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=186189.000000 s hg38.chr17_GL383563v3_alt 4491 193 + 375691 AAAAGGCTGATTTGAGGAAGTTTTGGGCTTCAAGAGTCAGCCACGAGGCAGGCACTAGGCCTGGAAATG-------GCCTCACAGTCATGAGTTGGGCCTAAATGGGCCACTGTGAGGGAGGAGCTGTGCCTGTTGAGGCTGCTGGCAGGCAGGCAGAAATTTGGCCTGGGGCAGCCGCCATGAGGCAAGAGCTGGGCCT s panTro4.chr17 66742 193 + 82630442 AAAAGGCTGATTTGAGGAAGTTTTGGGCTTCAAGAGTCAGCCACGAGGCAGGCACTAGGCCTGGAAATG-------GCCCGACAGTCATGAGTTGGGCCTAAATGGGCCACTGTGAGGGAGGAGCTGTGCCTGTTGAGGCTGCTGGCAGGCAGGCAGAAATTTGGCCTGGGGCAGCTGCCATGAAGCAAGAGCTGGGCCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783080 193 - 99891981 AAAACGCTGATTTGAAGAAGTTTTGGGTTTCAAGAGTCCACGAGGAGGCTGGAACTGGGCCTGTATAGG-------CTCCAACAGGCATGAGTCGGGCCTATAGAGGCCAGTGTGAGGGAGGAGCTGTGCCTTTCAAGGCTGCTGACAGGCAGACAGAACCTCAGCCTGGGGCAGCTGCTGTGAGGCAAGACCTGGGCCT i nomLeu3.chr17 I 3 C 0 s macFas5.chr3 127681571 198 - 192294377 GAGGGGGCGGCCTGAGGAAGTTCGGGGCCTGGAGAGCCCGCCAAAAGGCAAAAGCTGAGCCTGGAAAGGCCGTTCCCCGTGACGA--ATGAGCCGGGCCTAACGAGGCCACAGGGAGGCAGTAGCGGGGCCCGGCGGAGCTGCCGAAAGGCAGGAGGAGCTCTGGCCTGGGGAGGCCGCAGTCAGGCGAGAGCTGGGCGT i macFas5.chr3 I 323 C 0 s papAnu2.JH684865 26143 193 - 317753 AAAAGGCTGATTTGAGGAAGTTTTGGGCTTCAAGAGTCAGTCAGAAAGCAGGCACTGGGCCTGGATAGG-------GCCTGACAGTCATGAGTTGGGCCTAAGCAGGCCAGTGTGAGGGAGGAGCTGTGCCTGTTGAGGCTGCTGGCAGGCAGTCAGAAACTTGGCCTGGGGCAGCTGCCACGAGGCAAGAGCTGGGCCT i papAnu2.JH684865 I 3 C 0 s chlSab2.chr21 124139998 193 - 127223203 AAAAGACTGATTTGAGGAAGTTTTGGGCTTCAAGAGTCAGTCAGAAGGCAGGCACTGGGCCTGGATATG-------GCCTGACAGCCAGGAGTTGGGCCTAAACAGGCCAGTGTGAGGGAGGAGCTGTGCCTGTTGAGGCTGCTGGCAGGCAGTCAGAAACTTGGCCTGGGGCAGCTGCCATGAGGCAAGAGCTGGGCCT i chlSab2.chr21 I 3 I 483 e calJac3.chr2 1420759 0 + 204313951 C e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=-924.000000 s hg38.chr17_GL383563v3_alt 4684 3 + 375691 GGA s panTro4.chr17 66935 3 + 82630442 GGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783273 2 - 99891981 GG- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127681769 2 - 192294377 -GC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 26336 2 - 317753 -GG i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1420759 0 + 204313951 C e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=13523.000000 s hg38.chr17_GL383563v3_alt 4687 32 + 375691 AAAAGCCCCTGGGAGGCAAGAGCAGG--------------------------------GC-CTGC s panTro4.chr17 66938 32 + 82630442 AAAAGCCCCTGGGAGGCAAGAGCAGG--------------------------------GC-CTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783275 32 - 99891981 AGAGGCCCCTGGGAGGCAAGAGCGGG--------------------------------GC-CTGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127681771 32 - 192294377 AGAGTCCGCTGGGAGGCAGAGGCTGG--------------------------------GC-CTGT i macFas5.chr3 C 0 I 243 s papAnu2.JH684865 26338 64 - 317753 ATGGGCTGCCAAGATGCAGCAGCTGGGTCTGGAGAGGCCAGTGTGAGGCAAGAGACCAGC-CTGT i papAnu2.JH684865 C 0 I 15 s calJac3.chr2 1420759 33 + 204313951 AAAGGTCTTCGAGAAGTAAAGGGTGA--------------------------------GTGGTGC i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=50205.000000 s hg38.chr17_GL383563v3_alt 4719 107 + 375691 AGAGGCTGT---------------TCTCAAGTCAAAGCTGGGCCTGTTGATGCCACCGGGAAGCAGA-AGG-----------------------------------TGGGCCTGGAGAGTTT------------------GACTT--------------GAGG--------------------AAGTTTTGGGCCTACATTGGCCGCCAT s panTro4.chr17 66970 107 + 82630442 AGGGGCTGT---------------TCTCAAGTCAAAGCTGGGCCTGTTCATGCCACCGGGAAGCAGA-AGG-----------------------------------TGGGCCTGGAGAGTTT------------------GACTT--------------GAGG--------------------AAGTTTTGGGCCTACATTGGCCGCCAT i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783307 107 - 99891981 AGAGACTGT---------------TGTCAAGTCAAAGCTTGGCCTGTACATGCCACCGGGAAGCAGA-AGG-----------------------------------TGGGCCTGGAGAGTTT------------------GACTT--------------GAGG--------------------AAGTTTCGGGCCTACAGTGGCTGCCAT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127682046 141 - 192294377 GGAGGTTGT---------------CGTGAGGCCGGGGCTGGGCCCGCGGACGCAGCCGGGA-GCAGG-AGGAGCTGGGCCTGGATGGGAGGCCGGGAGGCCGCGACTGGGCCTGGAGGGGCC------------------GGCCT--------------GAGG--------------------AAGTTCGGGGCCTGGAGAGGACGCCAA i macFas5.chr3 I 243 I 983 s papAnu2.JH684865 26417 210 - 317753 GAAGATTTTGGCCTGGAAAGACTGTGgggggcaggagctgggccttTTGAGCCtgctgggaggcaggcaggaacTTGGCCAAGGAAGAACTCCGTTAGGCAAGAGCTGAGCCTGGAGAAGCCATGGTCACGCAGGAGCTGGACCTATTTAAGCTGCTGGGAGGCAGGTTGTGCTGGAGAATGAAAGCTTTGGGCCTATAAAGGCTGCCAG i papAnu2.JH684865 I 15 C 0 s calJac3.chr2 1420792 105 + 204313951 AGAGGCCTT---------------TTTCATGCTAAAGCTGAGCCTTTACATGCCACTGGGAGAGAGA-AGC-----------------------------------TGGGTCTGGAAAGGTT------------------GACTT--------------AAGG--------------------ACGTTTTGGGCATATATTGACCCTT-- i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=72602.000000 s hg38.chr17_GL383563v3_alt 4826 83 + 375691 ---GAGCTGGACAGGAACTGGGCCAAAAAAGGCTGTTGTGAGGCAGCAGTTGTGCCTGTAGACCCAGCCAAG---AGGAAGAGGTGGGC s panTro4.chr17 67077 83 + 82630442 ---GAGCTGGACAGGAACTGGGCCAAAAAAGGCTGTTTTGAGGCAGCAGTTGTGCCTGTAGACCCAGCCAAG---AGGAAGAGGTGGGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783414 83 - 99891981 ---GAGCTGGGCAGGAGCTGGGCCAAAAGAGGTTGTTGTGAGGCAATAGTTGTGCCTGTAGACTCAGCCAGG---AGGAAGAGCTGGGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683170 86 - 192294377 ---GAGCTGGGCCGGAGCCGAGCCAAAGGAGGTTGTCGTGAGGCAGGGGCTGGGCCCGCGGACGCAGCCGGGAGCAGGAGGAGCTGGGC i macFas5.chr3 I 983 I 432 s papAnu2.JH684865 26627 83 - 317753 ---GAGCTGGGCAAGAGCTGAGCTGAAAGAGGTTGTTGTAAGGTAGGAGGTGGGCCTGGAGATGCAGCCGGG---AGGAAGAGCTGAGC i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1420897 83 + 204313951 GGCAAACTGT-CAGGAGCTGGGCCAAAAGAAGTTGTTATGAGGCAGCAAGTGTTCCTGTATCCTCAGCCA-----AGACAGAGTTGGGC i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=11086.000000 s hg38.chr17_GL383563v3_alt 4909 11 + 375691 CTGGAGAAGCC s panTro4.chr17 67160 11 + 82630442 CTGGAGAAGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783497 11 - 99891981 CTGCAGAAGCT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683688 11 - 192294377 CTGGAGAGGCC i macFas5.chr3 I 432 C 0 s papAnu2.JH684865 26710 11 - 317753 CTGGAGAGGCC i papAnu2.JH684865 C 0 I 192 s calJac3.chr2 1420980 11 + 204313951 CTGGAAAATCT i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=262.000000 s hg38.chr17_GL383563v3_alt 4920 4 + 375691 CCCA s panTro4.chr17 67171 4 + 82630442 CCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783508 4 - 99891981 GCCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683699 4 - 192294377 ACGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 26913 4 - 317753 cctg i papAnu2.JH684865 I 192 C 0 s calJac3.chr2 1420991 4 + 204313951 GCAG i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761872 44 - 72422247 I a score=48491.000000 s hg38.chr17_GL383563v3_alt 4924 54 + 375691 TGAGGCAGAGGTTGGGCCTGTAGACGCTGAC------------------------------AGGAGGCAGGAGGTGGGCCTGGA s panTro4.chr17 67175 54 + 82630442 TGAGGCAGAGGTTGAGCCTGTAGACGCTAAC------------------------------AGGAGGCAGGAGCTGGGCCTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67761916 54 - 72422247 TGAGGCAGAGGTTGAGCCTGTAGAGGCTGAC------------------------------GGAAGGCACGAGTTGGGCCTGGA i ponAbe2.chrUn I 44 I 171 s nomLeu3.chr17 46783512 54 - 99891981 TGACACAGAGGCTGGGCCTGTAGAGGCCGAC------------------------------AGCAGGCAGGAGCTGGGCCTGGA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683703 84 - 192294377 AGAGGCAGGAGCTGGGCCGGCGGAGGCCGACTGGGCGACGAGTTTGGCCCGCAGGGGCCGTCGGGAGCAGGAGCGAGCCCTGGA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 26917 54 - 317753 tgaggcagaggttgagccTATAGAGGCTGAC------------------------------AGGAGGCAGGACTTGGGCCTGGG i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1420995 42 + 204313951 -TGGAAAGAGCCTGGGTTTTCAGAGGTCAGT------------------------------GGGAGGCAGGTG----------- i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I a score=15429.000000 s hg38.chr17_GL383563v3_alt 4978 38 + 375691 CAGGTCAACTTGAGGAGATTTTGGGCCTTCATAGGCCA s panTro4.chr17 67229 38 + 82630442 GAGGTCAACTTGAGGAGATTTTGGGCCTTCATAGGCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783566 30 - 99891981 GAGACCAAATTGAGAA--------GCCTTCATAGGCCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127683787 38 - 192294377 GAGGCCGACTCGAGGCCAGCGTGGGCCTGCAGAGGCCG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 26971 38 - 317753 ATGGCGGACCTGAGAAAATTCTTGGTCTACAGAAGCTG i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1421037 18 + 204313951 --------------------CTGGGCATTCAGAGGCCA i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e rheMac3.chr3 59760811 689 + 198365852 I e ponAbe2.chrUn 67761970 171 - 72422247 I a score=45435.000000 s hg38.chr17_GL383563v3_alt 5016 71 + 375691 CCAGGAGGCAGCAGTTGGGACTAGAGAGTCT------------------------------------------------------------------------GACTTGAGTAAGTTTTGGGCCCGGAGATGACGTCCTGGGA s panTro4.chr17 67267 71 + 82630442 CCAGGAGGCAGCAGTTGGGACTAGAGAGTCT------------------------------------------------------------------------GACTTGAGTAAGTTTTGGGCCCGGAGATGACATCCTGGGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783596 71 - 99891981 AAAGGAGGCAGTAGTTGGGATTAGAGAGGCT------------------------------------------------------------------------GACTTCAGGAAGTTTTGGGACTGGAGTTAACGTCCTGGGA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761500 71 + 198365852 CCAGGAGGCAGCAACTGGGCCTGGAGAGGCC------------------------------------------------------------------------GACTTGAGGAAGTTTTGGACCTGTAGATGATGTCCCGGGA i rheMac3.chr3 I 689 C 0 s macFas5.chr3 127683825 70 - 192294377 CCGGGAGG-AGGAGCTGAGCCTGGAGAGGCT------------------------------------------------------------------------GGCTGCAGGAAGTCTGGGGCGTGGAGACGCCGTCGGAGGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27009 143 - 317753 CCAGGAtgcaggagctgggcctggagaggcctggAGAGGCCACCAAGGCATGAGCTCTGCCTAAAGAGGCCAATGCTGGGCAGGAGATGTGACTGGAGAGGCTGACTTGAAGAAGTTTCGGGCACGGACAGCCTGTCGGGGGG i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1421055 51 + 204313951 -CTGGGGACAGTAAGTGGG-----------T-------------------------------------------------------------------------------GGAAGTTTTGTGCCTGGAGACGCCGTCCAGGA- i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e ponAbe2.chrUn 67761970 171 - 72422247 I a score=60812.000000 s hg38.chr17_GL383563v3_alt 5087 45 + 375691 CAGGAGTTGGGCGTGGAGAGGCCACCGTGAGGCAT---------------------------------------------------AAGCTGGATG s panTro4.chr17 67338 45 + 82630442 CAGGAGTTGGGCCTGGAGAGGTCACCGTGAGGCAT---------------------------------------------------AAGCTGGATG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762141 45 - 72422247 CAGGAGCTGGGCCTGAAGAGGCCACCGTGAGGCAT---------------------------------------------------GAGCTGAGCC i ponAbe2.chrUn I 171 C 0 s nomLeu3.chr17 46783667 45 - 99891981 CAGGAGCTGGGCCTGGAGAGGCCACCGTGAGGCAT---------------------------------------------------GAGCTGGGTG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761571 45 + 198365852 CAGGAGCTGGGCCTGGAGAGGCCACTGTGAGGCAT---------------------------------------------------GAGCTGGGCG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127683895 96 - 192294377 CAGGAGCCGGGCCCGGAAAGGCCACCGTGGGGCCCGGCTTCAGGACGTTTAGGGCCTACAAATGCCGCGGAGCGGGAGCTGGGTCGGAGCCGAGCC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27152 45 - 317753 CAGGACCTGGGCGTGGACAGGCCACAGTGAGGCAT---------------------------------------------------GAGCTGGGCG i papAnu2.JH684865 C 0 I 11 s calJac3.chr2 1421106 45 + 204313951 CCAAACCTGCAGCTGGAGATGCCATTGTGAGTTCA---------------------------------------------------AAGTTTTGCA i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I a score=11704.000000 s hg38.chr17_GL383563v3_alt 5132 11 + 375691 TAGAGAGGCCA s panTro4.chr17 67383 11 + 82630442 TAGAGAGGCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762186 11 - 72422247 TAATGAAATTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46783712 11 - 99891981 TAGAGAGGCCA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761616 11 + 198365852 TAGAGAGGCCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127683991 11 - 192294377 CAAAGAGATTG i macFas5.chr3 C 0 C 0 s calJac3.chr2 1421151 11 + 204313951 CAGAGATGCCA i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e papAnu2.JH684865 27197 11 - 317753 I a score=61443.000000 s hg38.chr17_GL383563v3_alt 5143 49 + 375691 GTGTGAGAC----------------------------------AAGACCTGGGCCTGTCTAGGCTGCTGGGAGAC---------------AGGCAGGA s panTro4.chr17 67394 49 + 82630442 GTGTGAGGC----------------------------------AAGACCTGGGCCTGTCGAGGCTGCTGGGAGAC---------------AGGCAGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762197 49 - 72422247 GTGTGAGGC----------------------------------AGGATCTGGGCCTGTTGAGGCTGCTGGGAGGC---------------AGGTAGGA i ponAbe2.chrUn C 0 I 258 s nomLeu3.chr17 46783723 49 - 99891981 GTGTGAGGC----------------------------------AGGACCTGGGCCTGTCCAGGCTGCTGGGAGAC---------------AGGCAGGA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761627 49 + 198365852 GTGTGTGGC----------------------------------AGGACCTGGGCCTGTCCAGGCTGCCAGGAAAT---------------AGGTGGAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684002 98 - 192294377 TCGTGAggccggggctgggcccgcggtcgcagccgggagcaggaggggctgggcctggacgggaggccgggaggccgcgactgggcctggaggggccg i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27208 49 - 317753 GTGTGAGGC----------------------------------AGGATCTTGGCCCATCAAAGTGGCCAGGAGGC---------------AGGTAGGA i papAnu2.JH684865 I 11 C 0 s calJac3.chr2 1421162 48 + 204313951 GTATG-GGC----------------------------------AGGACCTGGGCCTATCCAGGCTTCCAGGGAAC---------------AGACAGCC i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I a score=58687.000000 s hg38.chr17_GL383563v3_alt 5192 52 + 375691 ATCT------------GGCCAGGGAAGGTTGCCATGAGACAAAAGTTGGGCCTGGAAAGGC----CCT s panTro4.chr17 67443 52 + 82630442 ATCT------------GGCCAGGGAAGGTTGCCATGAGACAAAAGTTGGGCCTGGAAAGGC----CCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783772 52 - 99891981 ATCT------------GGCCAGGGAAGGTTGCCATGAGACAAAAGTTCGGCTTGAAAAGGC----CCT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761676 52 + 198365852 ACCT------------GGCCAGGGAAGGTTGCCATGAGACAAAAGTTGGGCCTGGAAAAAC----CCT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684100 68 - 192294377 gCCTGAGGAAGTTCGCGGCCTGGAGAGGCCGCCAAAAGGCAAAGGCTGGGCCTGGAAAGGCAGTTCCC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27257 52 - 317753 GCTT------------GTTTGGGGAAGATGTCCGTAAGGCAaaagctgggcctggagaggc----cat i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1421210 52 + 204313951 ACCT------------AGCCAGGGAAGGTTCCCGTGAGGCAAAATCTTCATCCGGAAAGGC----ACC i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140191 483 - 127223203 I e ponAbe2.chrUn 67762246 258 - 72422247 I a score=107757.000000 s hg38.chr17_GL383563v3_alt 5244 71 + 375691 TGTGAAGCATGAGCTTGGCCTAAAGAGGCCACTGGGTGGCAGGAGCTGGGTGTGTAGAAGCTGCTGAAAGG s panTro4.chr17 67495 71 + 82630442 TGTGAAGCATGAGCTTGGCCTAAAGAGGCCACTGGGTGGCAGGAGCTGGGTGTGTAGAAGCTGCTGAAAGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783824 71 - 99891981 TGTGAGGCATGAGCTTAGCCTAAAGAGACCACTGAATGGCAGGAGCTGGGTGTGTAAAAGCTGCTGAAAGG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761728 70 + 198365852 CGTGAGGTATTAGCTTGGCCTGAAG-AGCCACTGGGTGGCTGGAGCTGGGTGTGTAGAGGCTGCTGAAAGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684168 71 - 192294377 CGTGACGAATGAGCCGTGCCTAATGTGGCCACCGGGAGGCCGGAGCAGGGCCCGGCGGAGCTGCCGAAAGT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27309 71 - 317753 TGTCACGTAGGAGCTGGGCCTGTccaggccactgggaggcagagggtggacCTGGAAAGTTTGACTTGAGG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124140674 71 - 127223203 TGTGAGGCATGAGCTTGCTCTAGAGAGGTCATTGAGAGGCAGGAGCTGGGCCTGCAGAGGCTGCTGAAAGG i chlSab2.chr21 I 483 I 33 s calJac3.chr2 1421262 71 + 204313951 TGTGAGGCCTGATCTTGGCCTAAAGAGGCCATGGGGTGGCAGGAACTGGGTGTGTAGAGGCTGCTGAAAGG i calJac3.chr2 C 0 C 0 e ponAbe2.chrUn 67762246 258 - 72422247 I a score=48186.000000 s hg38.chr17_GL383563v3_alt 5315 57 + 375691 TTGGGAG----CTTGGCTTGGGGGATCCAC----AGTGAGGTAGATGCTGGGCGTAAAGAATCTG s panTro4.chr17 67566 57 + 82630442 TTGGGAG----CTTGGCTTGGGGGGTCCAC----AGTAAGGCAGATGCTGGGCGTGAAGAATCTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783895 56 - 99891981 CT-GGAG----CTTGGCTTGGGGGGACCAC----GGTGAGGCAGATGCTGGGCCTGAAGAATCTG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761798 56 + 198365852 -CAGGGG----CTTGGCTTGGGGGGGCCAC----GGTGAGGCAGATGCTGGGCCTGGAGAATCTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684239 60 - 192294377 -CAGGAGGAGCTCTGGCCTGGGGAGTCCGC----AGTCAGGCTAGAGCTGGGCGTGGAGAGTCCG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27380 59 - 317753 -CACTT-----TTGGGTCTTCAAAGGCCACTAGGAGCTGGGCAGGAGCTGAGCCAAAAGAGGTTG i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1421333 56 + 204313951 -CAGGAG----CTTGGCTTCTTGGGGCCAT----CATGAGGCAGATGCTGGATGTGAAGAGTCTG i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140745 33 - 127223203 I e ponAbe2.chrUn 67762246 258 - 72422247 I a score=69088.000000 s hg38.chr17_GL383563v3_alt 5372 45 + 375691 CTGTGAGGCAGACGTTCGGACTGTAGAGGCTGACGGGAGGCAGAG s panTro4.chr17 67623 45 + 82630442 CTGTGAGGCAGATGTTGGGACTGTAGAGGCCGACGGGAGGCAGAG i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46783951 45 - 99891981 CTGTGAGGCAGATGTTGGGCCTGTAGAGGCGGACGGGAGGCAGGA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761854 45 + 198365852 CTGTGAGGCAGATATTGGGCCTGTAGAGGCTGACAGGAGGCAGGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684299 45 - 192294377 CTGGGAGGCAGAGGCTGGGCCTGCGCAGACTTTCCGGAGGCAGGA i macFas5.chr3 C 0 I 1 s papAnu2.JH684865 27439 44 - 317753 TTCTGAGGCAGGAGTTGGGCCTCCAGGCACAG-CCAGAAGTAAAA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124140778 45 - 127223203 CTGTGAGGCAGAGGTTGAGCCTATAGAGGCTGACGGGAGGCAAGA i chlSab2.chr21 I 33 C 0 s calJac3.chr2 1421389 45 + 204313951 CTGTGAGGCAGAGGTTAGGCCTGTAGAGGCAGATGAGAGTGAGGA i calJac3.chr2 C 0 C 0 e ponAbe2.chrUn 67762246 258 - 72422247 I a score=28611.000000 s hg38.chr17_GL383563v3_alt 5417 11 + 375691 GCTGGGCCTGG s panTro4.chr17 67668 11 + 82630442 GCTGGGCCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762504 11 - 72422247 GCTGGGCCTGG i ponAbe2.chrUn I 258 C 0 s nomLeu3.chr17 46783996 11 - 99891981 GCTGGGCCTGG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761899 11 + 198365852 GCTGGGCCTGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684345 11 - 192294377 GCTGGGCCTGG i macFas5.chr3 I 1 I 199 s papAnu2.JH684865 27483 11 - 317753 GCGCAGCCTGT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124140823 11 - 127223203 GTTGGGCCTGG i chlSab2.chr21 C 0 I 39 s calJac3.chr2 1421434 11 + 204313951 CCTGGGCCTGT i calJac3.chr2 C 0 C 0 a score=13886.000000 s hg38.chr17_GL383563v3_alt 5428 8 + 375691 AGGGGCCA s panTro4.chr17 67679 8 + 82630442 AGGGGCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762515 8 - 72422247 AGACGCCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784007 8 - 99891981 AGAGGCCA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761910 8 + 198365852 AGAGGCTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684555 8 - 192294377 AGAAGTCA i macFas5.chr3 I 199 C 0 s papAnu2.JH684865 27494 8 - 317753 AGAGGCCA i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1421445 8 + 204313951 AGAGGCTG i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140834 39 - 127223203 I a score=70089.000000 s hg38.chr17_GL383563v3_alt 5436 30 + 375691 CCAAGATGCAGGAGCTGGGCCTGGAGAGGC s panTro4.chr17 67687 30 + 82630442 CCAAGATGCAGGAGCTGGGCCTGGAGAGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762523 30 - 72422247 ACAAAAGGCAGGAGCTGGGCCTTGAGAGGC i ponAbe2.chrUn C 0 I 234 s nomLeu3.chr17 46784015 30 - 99891981 CCAAGATGCAGGAGCTGCGCCTGGAGAGGC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761918 30 + 198365852 CCAGGACACAGAAGTTGGGCCTGAAGAGGC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684563 30 - 192294377 CCTGGGGGCAGCAGCTGGGCCTGGAGAGGC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27502 30 - 317753 TCTAGGGGcagcagctgggcctggagaggc i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124140873 30 - 127223203 CCAGGATGCAGGAGCTGGGCCTGGAGAGGC i chlSab2.chr21 I 39 I 751 s calJac3.chr2 1421453 30 + 204313951 CCGGCATTCAGTAGCTTTGCCTGGGGAGGC i calJac3.chr2 C 0 C 0 a score=1781.000000 s hg38.chr17_GL383563v3_alt 5466 5 + 375691 TGCAA s panTro4.chr17 67717 5 + 82630442 TGCAA i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46784045 5 - 99891981 TGCCA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761948 3 + 198365852 --TGC i rheMac3.chr3 C 0 I 2 s macFas5.chr3 127684593 3 - 192294377 --CAA i macFas5.chr3 C 0 I 2 s papAnu2.JH684865 27532 3 - 317753 --caa i papAnu2.JH684865 C 0 I 2 s calJac3.chr2 1421483 5 + 204313951 TGCCA i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124140903 751 - 127223203 I e ponAbe2.chrUn 67762553 234 - 72422247 I a score=15368.000000 s hg38.chr17_GL383563v3_alt 5471 8 + 375691 AGAAGCAT s panTro4.chr17 67722 8 + 82630442 AGAAGCAT i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46784050 8 - 99891981 AGAAGCAT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761953 8 + 198365852 AGAGGCAT i rheMac3.chr3 I 2 C 0 s macFas5.chr3 127684598 8 - 192294377 AAAGGCAT i macFas5.chr3 I 2 C 0 s papAnu2.JH684865 27537 8 - 317753 AAAGGCAG i papAnu2.JH684865 I 2 C 0 s chlSab2.chr21 124141654 8 - 127223203 AGAGGCAG i chlSab2.chr21 I 751 C 0 s calJac3.chr2 1421488 8 + 204313951 AGAGGCAT i calJac3.chr2 C 0 C 0 e ponAbe2.chrUn 67762553 234 - 72422247 I a score=2552.000000 s hg38.chr17_GL383563v3_alt 5479 1 + 375691 G s panTro4.chr17 67730 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762787 1 - 72422247 G i ponAbe2.chrUn I 234 C 0 s nomLeu3.chr17 46784058 1 - 99891981 G i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59761961 1 + 198365852 G i rheMac3.chr3 C 0 I 1443 s macFas5.chr3 127684606 1 - 192294377 G i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27545 1 - 317753 G i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141662 1 - 127223203 G i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421496 1 + 204313951 A i calJac3.chr2 C 0 C 0 a score=78618.000000 s hg38.chr17_GL383563v3_alt 5480 44 + 375691 AGCTGG--------------------------------GCCTGGTGAGGTTGACTTGAGAAAGTTCAGGGCCTGGA s panTro4.chr17 67731 44 + 82630442 AGCTGG--------------------------------ACCTGGTGAGGTCGACTTGACAAAGTTCAGGGCCTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762788 44 - 72422247 AGCTGG--------------------------------GCCTGGTGAGGTCAACTTGAGAAAGTTCAGGGCCTGGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784059 76 - 99891981 AGCTGGGCCTCGAGAGGCCAGTATGAGGCAAGAGATCAGCCTGGGGAGGCTGACTTGAGGAAGATTTTGGCCTGGA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763405 44 + 198365852 AGCTGG--------------------------------GCCTGGTGAGGTCGACTTGAGAAAGTTCTGGGCCTGGA i rheMac3.chr3 I 1443 C 0 s macFas5.chr3 127684607 44 - 192294377 AGCGGG--------------------------------GCCTTCAGAAGCTGACTTGTGGACATTTTGGGCTTGGA i macFas5.chr3 C 0 I 40 s papAnu2.JH684865 27546 44 - 317753 AGCAGG--------------------------------GCCTTGAGAGGCCGACTTGTGGATATTTTGGGCCTGGA i papAnu2.JH684865 C 0 I 17 s chlSab2.chr21 124141663 44 - 127223203 AGCTGG--------------------------------GTCTGGTGAGGTCGACTTGAGAAAGTTCTGGGCCTGGA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421497 76 + 204313951 AGCTGAGCCTAAAGAGCCCAGTGTGAGGCAAGTGCTTGTCCTGGAGTTGCCAACTTGAGGAAGACTCCAGCCTGGA i calJac3.chr2 C 0 C 0 a score=11922.000000 s hg38.chr17_GL383563v3_alt 5524 10 + 375691 GAGAAGGCTG s panTro4.chr17 67775 10 + 82630442 GAGAAGGCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762832 10 - 72422247 GAGAAGGCTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784135 10 - 99891981 GAAAATGTCG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763449 10 + 198365852 GAGAAGGCTG i rheMac3.chr3 C 0 C 0 s papAnu2.JH684865 27607 10 - 317753 GAGGACATTT i papAnu2.JH684865 I 17 I 13 s chlSab2.chr21 124141707 10 - 127223203 GAGAAGACTG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421573 10 + 204313951 GAGCCTGTTT i calJac3.chr2 C 0 C 0 e macFas5.chr3 127684651 40 - 192294377 I a score=87995.000000 s hg38.chr17_GL383563v3_alt 5534 51 + 375691 GG-----------------------------------AGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCT s panTro4.chr17 67785 51 + 82630442 GG-----------------------------------AGGCAGGAGCTGGGTCTAAAGAGGCCGTTGTAACGATGGAGCTGTGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chrUn 67762842 51 - 72422247 GG-----------------------------------AGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784145 86 - 99891981 GGGGCAGGCAGGAACTTGGCGGGGGATGACCTCCGTAAGGCAAGAGCTGAGCCTGAAGAGGCTGTTGTCACGCAGGAGCTGGGCCT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763459 51 + 198365852 GG-----------------------------------AGGCAGGAGCTGGGCCTCAAGAGGCCGTTGTAATGATGGAGCTGGGCCT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684691 51 - 192294377 AG-----------------------------------AGGCAGGAGCTGGGACTAAAGAGGCCATTGTAAGGCAGGAGCTGGGCCT i macFas5.chr3 I 40 C 0 s papAnu2.JH684865 27630 51 - 317753 AG-----------------------------------AGGCAGGAGTTGGGACTAAAGAGGCTACTGtaaggcaggagctgggcct i papAnu2.JH684865 I 13 C 0 s chlSab2.chr21 124141717 51 - 127223203 GG-----------------------------------AGGCAGGAGCTGGCTCTAAAGAGGCCGTGGTAACGATGGAGCTGGGCCT i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421583 19 + 204313951 -------------------------AT----------GGGCAGGACCTGGGCCT-------------------------------- i calJac3.chr2 C 0 C 0 a score=22728.000000 s hg38.chr17_GL383563v3_alt 5585 13 + 375691 GTGGAGGCTGTTG s ponAbe2.chrUn 67762893 13 - 72422247 GTGGAGGCTGTTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784231 13 - 99891981 GTTCAGGCTGCCG i nomLeu3.chr17 C 0 I 672 s rheMac3.chr3 59763510 13 + 198365852 GTGGAGGCTGTCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684742 13 - 192294377 GTACAGGCTGCCG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27681 13 - 317753 gtACAGGCTGCCG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141768 13 - 127223203 GTGGAGGCTGTTG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421602 13 + 204313951 GTCGAGGCTGCCA i calJac3.chr2 C 0 C 0 e panTro4.chr17 67836 0 + 82630442 C a score=7871.000000 s hg38.chr17_GL383563v3_alt 5598 5 + 375691 TGAGG s ponAbe2.chrUn 67762906 5 - 72422247 TGAGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784916 5 - 99891981 TGAGG i nomLeu3.chr17 I 672 C 0 s rheMac3.chr3 59763523 5 + 198365852 TGAGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684755 5 - 192294377 GGAGT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27694 5 - 317753 GGAGT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141781 5 - 127223203 TGAGG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421615 5 + 204313951 GGAGG i calJac3.chr2 C 0 C 0 e panTro4.chr17 67836 0 + 82630442 C a score=5325.000000 s hg38.chr17_GL383563v3_alt 5603 3 + 375691 CAG s ponAbe2.chrUn 67762911 3 - 72422247 CAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784921 3 - 99891981 CAA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684760 3 - 192294377 CAG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27699 3 - 317753 CAG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141786 3 - 127223203 CAG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421620 3 + 204313951 CAG i calJac3.chr2 C 0 I 37 e rheMac3.chr3 59763528 0 + 198365852 C e panTro4.chr17 67836 0 + 82630442 C a score=-561.000000 s hg38.chr17_GL383563v3_alt 5606 1 + 375691 T s ponAbe2.chrUn 67762914 1 - 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784924 1 - 99891981 A i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684763 1 - 192294377 A i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27702 1 - 317753 A i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141789 1 - 127223203 T i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1421623 37 + 204313951 I e rheMac3.chr3 59763528 0 + 198365852 C e panTro4.chr17 67836 0 + 82630442 C a score=21521.000000 s hg38.chr17_GL383563v3_alt 5607 28 + 375691 AGCCTCATCTGCGGAGGCTGCCGTGACG s ponAbe2.chrUn 67762915 28 - 72422247 AGCCTCATCTGCGGAGACTGCCGTGAGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784925 28 - 99891981 AGCTGGGCCTGGAGAGGCCATTGTCACG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684764 28 - 192294377 AGATGGGCCTCAGGAGGCCACTGTAAAA i macFas5.chr3 C 0 I 27 s papAnu2.JH684865 27703 28 - 317753 AGATGGCCCTCAAGAGGCCACTGTAAAA i papAnu2.JH684865 C 0 I 27 s chlSab2.chr21 124141790 28 - 127223203 AGCCTTATCTGTGGAGACTGCTGTGAGG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421660 28 + 204313951 AGCCAGGCCTGGAGAGGCCACTGTCACT i calJac3.chr2 I 37 C 0 e rheMac3.chr3 59763528 0 + 198365852 C e panTro4.chr17 67836 0 + 82630442 C a score=98760.000000 s hg38.chr17_GL383563v3_alt 5635 73 + 375691 TAGGGTA-----TGGGCCTAAATAGGCCATTGAGAGTCATGAGCTTGGTCTGTAGAGGCTGACTGGAGAAAGTTCTGG s ponAbe2.chrUn 67762943 73 - 72422247 TAGGGTA-----TGGGCCTAAATAGGCCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCTGACTGGAGAAAGTTCTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46784953 73 - 99891981 CAGGAGC-----TGGGCCTGTCCAGGCCATTGGGAGGCAGAAGGTGGGCCTGGAAAGGTTGACCTGAGGCAGTTTTGG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763528 73 + 198365852 TAGGGTA-----TGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGACCCGTAGAGGCCGACTGGAGAAAGTTCTGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127684819 78 - 192294377 TGAGGCAAAAGCTGGCCCTTGGGAGGGCAATGAGAGGCAGGAGCTGGGTCTGGTGAGGTCAACTTGAGAAAGTTCTGG i macFas5.chr3 I 27 C 0 s papAnu2.JH684865 27758 78 - 317753 TGAGGCAAAAGCTGGCCCTTGGGATGGCAATGAGAGGCAGGAGCTGAGTCTGGTGAGGTTGACTTGAGAAAGTTCTGG i papAnu2.JH684865 I 27 C 0 s chlSab2.chr21 124141818 73 - 127223203 TAGGGCA-----CGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGACTGGAGAAAGTTCGGG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421688 73 + 204313951 CAGGAGC-----TGGGCCTGTCCAAGTCATTGAGAGGCTGAACCTAGACCGGGAGAGCTTGACTTGAGGTAGTTTTGG i calJac3.chr2 C 0 C 0 e panTro4.chr17 67836 0 + 82630442 C a score=34190.000000 s hg38.chr17_GL383563v3_alt 5708 44 + 375691 GCCTGG---------AGAGGCTGCCGGGA----GGTAGGAGCTGGGCCAAAAgatgt s ponAbe2.chrUn 67763016 44 - 72422247 GCCTGG---------AGAGGCTGCCGGGA----GGTAGGAGCTGGGCCAAAAgattt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46785026 48 - 99891981 GCCTAC---------AAAGGCCACTAGGAGCTGGGCAGTAGCTGACCCAAAAGATGT i nomLeu3.chr17 C 0 I 379 s rheMac3.chr3 59763601 44 + 198365852 ACCTGG---------AGAGGCTGCCAGGA----GGCAGGAGCTGAGCCAAAAgattc i rheMac3.chr3 C 0 C 0 s chlSab2.chr21 124141891 53 - 127223203 GCCTGGAGAGGCTGCAGAGGCTGCCGGGA----GGCAAGACCTGGGCCAAAAgattc i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421761 48 + 204313951 GCCTAA---------AAATGTCACCAGGAGCTAGGCAGGAGCTGAGATGAAAGAGGT i calJac3.chr2 C 0 I 80 e papAnu2.JH684865 27836 0 - 317753 C e macFas5.chr3 127684897 0 - 192294377 C e panTro4.chr17 67836 0 + 82630442 C a score=3000.000000 s hg38.chr17_GL383563v3_alt 5752 9 + 375691 aagcacatt s ponAbe2.chrUn 67763060 9 - 72422247 aagcacatt i ponAbe2.chrUn C 0 C 0 s rheMac3.chr3 59763645 9 + 198365852 aagcacatt i rheMac3.chr3 C 0 C 0 s chlSab2.chr21 124141944 9 - 127223203 aaccttgtt i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1421809 80 + 204313951 I e papAnu2.JH684865 27836 0 - 317753 C e macFas5.chr3 127684897 0 - 192294377 C e nomLeu3.chr17 46785074 379 - 99891981 I e panTro4.chr17 67836 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 5761 1 + 375691 t e calJac3.chr2 1421809 80 + 204313951 I e chlSab2.chr21 124141953 0 - 127223203 C e papAnu2.JH684865 27836 0 - 317753 C e rheMac3.chr3 59763654 0 + 198365852 C e macFas5.chr3 127684897 0 - 192294377 C e nomLeu3.chr17 46785074 379 - 99891981 I e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=30355.000000 s hg38.chr17_GL383563v3_alt 5762 137 + 375691 gtatttattaggcactttatttc---cattattacactgtaatatataataaaataattatagaactcac-------------cataatgtagaatcagtgggcgtgttaagcttgttttcctgcaactggatggtcccacctgagcgtgatg s rheMac3.chr3 59763654 153 + 198365852 acatttattaggcactttatttctattattattacattgtaatatatagtgaaataattatacaactcaccataatgtagaatcataatgtagaatcagtgggcatgttaagcttgttttcctgcaacaagacggtcccatctgagcttgacg i rheMac3.chr3 C 0 T 279 s chlSab2.chr21 124141953 137 - 127223203 acatttattaggtactttatttc---cattattaaattgtgatatacagtaaagtaattatagaactcac-------------cataatgtagaatcagtgggcatgttaagcttgttttcctgcgactagatggtcccatctgagcgtgacg i chlSab2.chr21 C 0 I 211 e calJac3.chr2 1421809 80 + 204313951 I e papAnu2.JH684865 27836 0 - 317753 C e macFas5.chr3 127684897 0 - 192294377 C e nomLeu3.chr17 46785074 379 - 99891981 I e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 5899 217 + 375691 ggagaaagtgacagatcaataggtattagattctcataaggacagcgcaacctcgatccctcacatgcacggttcacaacagggtgcgttctcctatgagcatctaatgctgctgctcatctgagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagcttccctcactccctcactcgacaccactcacct e calJac3.chr2 1421809 80 + 204313951 I e chlSab2.chr21 124142090 211 - 127223203 I e papAnu2.JH684865 27836 0 - 317753 C e rheMac3.chr3 59763807 279 + 198365852 T e macFas5.chr3 127684897 0 - 192294377 C e nomLeu3.chr17 46785074 379 - 99891981 I e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=221027.000000 s hg38.chr17_GL383563v3_alt 6116 2797 + 375691 cctgctgtgtggctccttgcggctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAGCGACCCTTCCCACACCAGTCTTCACAGTGGTCAAGGGCAGCAACCACTTAGCTCCCAAGGCATGTGCCTCAGCTGGCATTTCGTCACAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACCTACTGGAAATCACCAGCACCCCATTTCCCACTGGCAAAGAGCTCAGCACTACCCCCTGGGAAACCACACCTATGCCCAAATCCCATCTGTGTGGGTTTACCTCCTGGGACCCTTCCTAACAtattagtcagagtccaatcaggaagcataaaccactcaaaagtttaaagtggtaaaatttaatacagagaattattcattataacaggtgaacagcataatgagagattggctagcacagagtaaagagaactctagagaatatgggactagcCCAggccaggcatggtggctcatgcctgaaattccagccattacagaagctaatgcaggaggactgcttaaggccaggagctagagaccgctctggacgacacagtgagaccctgtctctatccaaaaggagaaaaaagttagctgggggtggtgctgcacacttgtagtcccagctactcggaatgctgaagtttgagcctgggaggtcaaggctgcagtgaggcatgattatgccactacagtccagcc-ggatgacagagcaagaccctgtctcaaagaacaaaaCCACAACAACCATTTACAGACAGAAAAGAAATAGAGCTAATAAGCTGAGGAAAGATGTTgaaatgtgacaagtaaagtaatatgaggtcttttgtctatttaaaataatcaaacaaaaaatggcttacgaaattataataccctgtgctggcaaaggtgcagtgaaatgggcactttcttatactatgaggggtggttaaattgtgtataagccttcccgggtaaagcctgtcaattttttaaaataatggagacagggtctcaccatactgccatactgcctcctccaactcttggcctcaagcaatcctcctctcttagcctcccaaagtgctaagattatagctgggaggcaccCAAAACCCTGTCAATTTACATCAAGGGTAAGGAGAATGTCCATTCACCATGACTCACAGTAATCTTACTTC-----------TGGGGAGACAATTCAATCTAAGCAAAAGGTCATCTGTACACACACAGTAAAAATCTGGGAGTAACTGAAGACAGAGTTGGTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACTATGGTATCAATAGGCACCTGGTAAAAGGTCAGTTGATGTT-GCTGCTGCttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagtgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgactccccctttgtttccaaggcctatcgcaaactcttggcctcaagccatcctcctgcctcagcctcccaaagtgttgcaattaccagtgtgagccaccacatctggccAGCTGCTACTTTTATCAATATTATTCTTATTCCACTCAATTAAAAATTATTATTTTCAAGGCTATGCAACAGTATGTATCCTACAGCGTAATTGTAAAAACATACACAGTCCtcatccctcagtat----acagaattagttccagccccccatctctgcatataccaaaatccatgcttactcacgtttcgctgtcacccctctagaatccacgtatacgaaaattccaaatgttagttgggcatagtggcaagcacctgtagtctcagccacgtgggaggttgaggtgggaggatcgcttcagcctggaaggttgaggctgcagtcagctgcaatagcactactacactccagccttggacaacagagggagaccctgtctcagaacaaaaaaaataaataaataaaaaaTAAAACAGGTTAGAAACTGTGATGAGGTCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATCGTGATAAATCAGTACGATTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGGAAAATGCAGAACACAAAGACAGAGAGTAAAAAGAGAAATTAGGAAAGCATTCTACATGTTGAATAGGAAGACACTGGCCATGTTCGTGCAGCGGCAGTATGTCGTGACATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATCATCAGAGAAGCAAAATACTGGTAGCGACACTCAAGTAAACCATGAAATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCTATACAACATTGTTTATCTGCCTTTTGTTTGTTTGTAAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTTAACTTATTCTTCTGTTTTTC---TTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAA---TTTCTTT-TTTAGAAAATTGAACAAGTGCTCCCTGTGGTGGCACATACCTCAAGGAtgggaggcaggggtggaagggtcacttgaggccattagtttgacaccagcctggccaacaaagtgagaccccgtgtctacaaaacaatttaaaaattagccaagtatcgtcatgtatacctacagtcccagctac s chlSab2.chr21 124142301 2782 - 127223203 gctgttgtgtggctccttacagctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAAGGACCCTTCCCACACCAGTCTTCATAGCGGTCAAGTGCAGCAACCACTTAGCTCCCAAGGCATGTGCCTCAGTTGGCATTTCATCACAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACTTACCGGAAATCACCAGTATCCCATTTCCCATTGGCAAGGAGCTCAGCACTGTCCCTTGGAAAATCAAACCTATGCCCAAATCCCATCTGTGTGAGTTTATCTCCCGGGACCCTTCCGAGtatattagtcagagtccaatcaggagacataaaccactcaaaagtttaaagtggtaaaatttaatccagagaattattcattgtaacaggggaacagcataatgagagattggctagcacaaagtaaagagaactctagagaaatcaggactagcCCAggccaggcatggtggctcatacccaaaattccagcaatttgagaagctaacgcaggaggactgcttaaggccaggagctagagaccggtctggacaacacagtgagtccctgtctctatccaaaaaaagaaaaaacttagctgggagtggtggtgcacacttgtagtctcagctactcaggaagctgaagtttgagcctgggagatcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctcaaagaacaaaacaacaacaaCCGTTTACAGACAGAAAAGAAATAGAGCTAATAAGCTAAGGAAAGATGTAGAAATGTGACAAGTAAAGTAATATGAGGTCTTTTACCAATTTAAAAT----AAACAAAAAATGAC--ATTAAATTATAAGACCCTGTGCTGGCAAAGATGCAGTGAAATGGGCACTTTCTTATACTATGAGGGGTGTTTAAATTGTATATAAGGCTTCCAGGGTAAAGCTTGACaattttttaaaataatagagacagggtctcaccatactgccaaactgcctcctccaactcttggcatcaagcaatcctcctgtcttagcctcccaaagtgctgagattatagctgggaggcacccaaaaccttgtcaatttACatcaagggtaatgagaatgtccattcaccatgactcacagtaatcttacttctgcaaataccttggggagacaattcaatctaaac-aaaggtcatctg--cacaaaCAGTGAAAATCTGGGAGTAACGGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACCATGGTATTAACAGGCAACTGGTAAAAGGTCAGTTGATGTTAGCTGCTACttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgact--ccctttgtttccaaggcctgtctcaaactcttggcctcaagccatcctcctgcctcagcctcccaaagtgttgtgattactggtgtaagccaccacacctggccAGCTGCTACTTTTATCAATATTATTATTACTCCACTCAGTTAAAAATTCTTATTTTCAAGGCTATGTAACAGTATGTGTCCTACAGCATAATTGTAAAAACATATAcag---tcgtccctcggtatacagacagaattagttccagccccacatctctgcatataccaaaatccatgcttactcacgtttcgccgtcacccctctggaacccacgtataGGaaaattccaaatattagttgggcatagtggcaagcacctatagtctcagccacgtgggaggctgagacggggagactgcttgagcctgggaggttgaggctgcagtcaactgtgatagcactactacactccagac-tggacaacagaacgagactctgtctcagaaaaaaacaaa---------ataaaacaaaaCAGGTTAGAAATTGTAATGAGGCCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATGGCGATAAATTAGTATGACTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGTAAA---AGAAATTAAGAAAGCATTCAACATGTTTAAGAGGAAGACACTGGCCATGTTTGTGCAGCAGCAGTATGTCACGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTCATAAAAATGATCAGAGAAGCAAAATACTGATAGCAATACTCCAGTAAACCACAAAATTTCCATAACTCATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGACGTTCCTATACAACACTGTTAATTTGCCT----TATGTTTGCAAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTG----TAAGTCATTTGAACATATTCTTCTGTTTTTCTATTTTTATCTTCCTGCCATCATCCTACAGCCTTACTTTAGAAATGTTTTATTTGTTTAGAAAATTGAACAAGTGCTCATTGTGGCAGCTCATACTTCTAGGAtgggaggcaggggtgaaagggttacttaaggccaggagtttgacacca----ggccaacaaagtgagaccccatgtccacaaaacaatttaaaaattagccaagtgtcgtcatgtatacctatagtcccagctac i chlSab2.chr21 I 211 T 3397 e calJac3.chr2 1421809 80 + 204313951 I e papAnu2.JH684865 27836 0 - 317753 C e rheMac3.chr3 59763807 279 + 198365852 T e macFas5.chr3 127684897 0 - 192294377 C e nomLeu3.chr17 46785074 379 - 99891981 I e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 8913 10 + 375691 CTGAACTTAC e calJac3.chr2 1421809 80 + 204313951 I e chlSab2.chr21 124145083 3397 - 127223203 T e papAnu2.JH684865 27836 0 - 317753 C e rheMac3.chr3 59763807 279 + 198365852 T e macFas5.chr3 127684897 0 - 192294377 C e nomLeu3.chr17 46785074 379 - 99891981 I e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=2956.000000 s hg38.chr17_GL383563v3_alt 8923 12 + 375691 TGAGAAAGTTCA s nomLeu3.chr17 46785453 12 - 99891981 TGAGAAAGTTCT i nomLeu3.chr17 I 379 C 0 s chlSab2.chr21 124141686 12 - 127223203 TGAGAAAGTTCT i chlSab2.chr21 T 3397 C 0 e calJac3.chr2 1421809 80 + 204313951 I e papAnu2.JH684865 27836 0 - 317753 C e rheMac3.chr3 59763807 279 + 198365852 T e macFas5.chr3 127684897 0 - 192294377 C e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=807.000000 s hg38.chr17_GL383563v3_alt 8935 2 + 375691 GA s nomLeu3.chr17 46785465 2 - 99891981 GG i nomLeu3.chr17 C 0 C 0 s chlSab2.chr21 124141698 2 - 127223203 GG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421889 2 + 204313951 GG i calJac3.chr2 I 80 C 0 e papAnu2.JH684865 27836 0 - 317753 C e rheMac3.chr3 59763807 279 + 198365852 T e macFas5.chr3 127684897 0 - 192294377 C e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=69268.000000 s hg38.chr17_GL383563v3_alt 8937 68 + 375691 GCCTGGAGAGAAGGCTGGGAGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCC s nomLeu3.chr17 46785467 68 - 99891981 GCCTGGAGAGAAGGCTGGGGGGCAGGAGCTGGGCCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684897 68 - 192294377 GCCTGGAGAGAAGACTGGGAGGCAGGAGCTGGGTCTAAAGAGGCCGTTGTAATCATGGAGCTGGGCCA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27836 68 - 317753 GCCTGGAGAGAAGACTGGGAGGCTGGAGCTGGGCCTAAAGAGGCTGTCATAACGTTGGAGCTGGGCCT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141700 68 - 127223203 GCCTGGAGAGAAGACTGGGAGGCAGGAGCTGGCTCTAAAGAGGCCGTGGTAACGATGGAGCTGGGCCT i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421891 68 + 204313951 GCCTGGATAGGCCACCCAGAGTCAGGAGCTGCAACTAGAAAGGCCATTGTAAGGGAGGAGCTGGGCTT i calJac3.chr2 C 0 C 0 e rheMac3.chr3 59763807 279 + 198365852 T e ponAbe2.chrUn 67763069 0 - 72422247 C e panTro4.chr17 67836 0 + 82630442 C a score=76569.000000 s hg38.chr17_GL383563v3_alt 9005 50 + 375691 GTGGAGGCTGTTGTGAGGCAGTAGCCTCATCTGCGGAGGCTGCCGTGACG s panTro4.chr17 67836 50 + 82630442 GTGGAGGCTGTTGTGAGGCAGTAGCCTCATCTGCGGGGACTGCCGTGACG i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46785535 50 - 99891981 GTGGAGGCTGTTGTGCGGCAGTAGCCTCATCTGCAGAGACTGCCGTGAGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127684965 50 - 192294377 GTGGAGGCTGTTGTGAGGCAGTAGACTCATCCGCGGAGACTGCCGTGAGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27904 50 - 317753 GTGGATGCTGTTGTAAGGCAGTAGCCTCATGCGCGAAGACTGCTGTAAGG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141768 50 - 127223203 GTGGAGGCTGTTGTGAGGCAGTAGCCTTATCTGTGGAGACTGCTGTGAGG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1421959 50 + 204313951 GTGAACACTGCTGCGAGGCGGTAGCCTCAACTGCAAAGACTACCATGAGG i calJac3.chr2 C 0 C 0 e rheMac3.chr3 59763807 279 + 198365852 T e ponAbe2.chrUn 67763069 0 - 72422247 C a score=183884.000000 s hg38.chr17_GL383563v3_alt 9055 88 + 375691 TAGGGTATGGGCCTAAATAGGCCATTGAGAGTCATGAGCTTGGTCTGTAGAGGCTGAC-TGGAGAAAGTTCTGGGCCTGG---------AGAGGCTGC s panTro4.chr17 67886 88 + 82630442 TAGGGTATGGGCCTAAATAGGCCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCTGAC-TGCAGAAAGTTCTGGGCCTGG---------AGAGGCTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46785585 86 - 99891981 TAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGG-CTATAGAGACCGAC-TGGAGAAAGATCTGGGCC-AG---------AGAGACTGC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763528 88 + 198365852 TAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAGCTTGACCCGTAGAGGCCGAC-TGGAGAAAGTTCTGGACCTGG---------AGAGGCTGC i rheMac3.chr3 T 279 C 0 s macFas5.chr3 127685015 97 - 192294377 TAGGGTGTGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGAT-TGGAGAAAGTTTGGGGCCTGGAGAGGTTGCAGAGGCTGT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 27954 88 - 317753 TAGGGTATGGGCCTAAATAGACCATTGTGAGTCACGAGCTTGGTCTGTAAAGGCCAAC-TGGAGAAAgttctgggcctgg---------agaggctgc i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141818 88 - 127223203 TAGGGCACGGGCCTAAATAGACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGAC-TGGAGAAAGTTCGGGGCCTGG---------AGAGGCTGC i chlSab2.chr21 C 0 I 47 s calJac3.chr2 1422009 83 + 204313951 TAGGGTATGGGCCTAAATAGGCCATTGTGAGCCATGAG------CTGTGGAGGCCGACATGGAAAAAGTTCTGGGCCTGG---------AAAGGCTGC i calJac3.chr2 C 0 C 0 e ponAbe2.chrUn 67763069 0 - 72422247 C a score=45667.000000 s hg38.chr17_GL383563v3_alt 9143 39 + 375691 CGGGAGGTAGGAGCTGGGCCAAAAgatgtaagcacatt------t s panTro4.chr17 67974 39 + 82630442 CGGGAGGTAGGAGCTGGGCCAAAACatgtaagcacatt------t i panTro4.chr17 C 0 C 0 s nomLeu3.chr17 46785671 38 - 99891981 CAGGAGGCAGGAACTGGGCCAAAAgactctagcacatt------- i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763616 38 + 198365852 CAGGAGGCAGGAGCTGAGCCAAAAgattcaagcacatt------- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127685112 38 - 192294377 TGAGAGGCAAGACCTGGGCCAAAAgattcaagtatgtt------- i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 28042 44 - 317753 cgGGAGGCAAGACCTGGGCCAAAAGATTCAAGCATATTACATTG- i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1422092 38 + 204313951 GAGGAGGCAGGAGCGCAGCCAAAAgattcaagcacatt------- i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124141906 47 - 127223203 I e ponAbe2.chrUn 67763069 0 - 72422247 C a score=3394382.000000 s hg38.chr17_GL383563v3_alt 9182 1255 + 375691 gcatttattaggcactttatttc---cattattacactgtaatatataataaaataattatagaactcac-------------cataatgtagaatcagtgggcgtgttaagcttgttttcctgcaactggatggtcccacctgagcgtgatgggagaaagtgacagatcaataggtattagattctcataaggac---agcgcaacctagatccctcacatgcacggttcacaacagggtgcgttctcctatgagaatctaacgctgctgctcatct--gagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagcttccctcactccctcactcgacaccgctcacctcctgctgtgtggctccttgcggctacatggctcaggggttggggacccctgCTCAAGTGCATCCAAAGCGACCCTTCCCACACCAGTCTTCACAGTGGTCAAGGGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTCGTCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCAC----TGTGAGGTCACCTACTGGAAATCACCAGCATCCCATTTCCCACTGGCAAAGAGCTCAGCACTGCCCCCTGGTAAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTGTATCTCCTGGGACCCTTCCTAACAt---attagt--cagagtccaatcaggaagcataaaccactcaaaagtttaaagtg-gtaaaatttaatacagagaattattcattataacaggtgaacagcataatgagagattggctagcacaaagtaaagagaactctagagaatataggactagcCCAggccaggcatggtggctcaggcctgaaattccagcaatttgagaagctaatgcaggaggattgcttaaggccaggagctagagaccggtctggacaacagagtgagaccctgtctctatccaaaggaagaaaaaagttagctggtggtggtagtgcacacttgtagtcccagctactcggaatgctga-----------agtttgagcctgggaggtcaaggctgcagtgaggcatgattatgccactacagtccagcct-ggtgacagagcaagaccctgtctcaaagaa------caaaaCC---ACA---ACAACCATTTACAGACAGAAAAGAAATAGAGCTAATAA-----GCTGAGGAAAGATGTTgaaatgtgac----aagtaaagtaatatgagttcttttgtctatgtaaaataatcaaacaaaaaatgacttactaaattataataccct s panTro4.chr17 68013 1255 + 82630442 gcatttattaggcactttatttc---cattattacactgtaatatataataaaataattatagaactcac-------------cataatgtagaatcagtgggcgtgttaagcttgttttcctgcaactggatggtcccacctgagtgtgatgggagaaagtgacagatcaataggtattagattctcataaggac---agtgcaacctagatccctcacatgcacggttcacaacagggtgcgttctcctatgagaatctaatgctgctgctcatct--gagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagcttccctcactccctcactcaacaccgctcacctcctgctgtgtggctccttgcggctccatggctcaggggttggggacccctgCTCACGTGCATCCAAAACGACCCTTCCCAAACCAGTCTTCACAGTGGTCAAGGGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTCGTCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCAC----TGTGAGGTCACCTACTGGAAATCACCAGCATCCCATTTCCCACTGGCAAAGAGCTCAGCACTGCCCCCTGGGAAACCAAACCTATGCCCAAATCCCATCTCTGTGTGTTTATCTCCTGGGACCCTTCCTAACAt---attagt--cagagtccaatcaggaagcataaaccactcaaaattttaaagtg-gtaaaatttaatacagagaattattcattataacaggtgaacagcataatgagagactggctagcacaaagtaaagagaactctagagaatatgggactagcCCAggccaggcatggtggctcatgcctgaaattccagcaatttgagaagctaatgcaggaggattgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctatccaaaagaagaaaaaagttagctgggagtggtggtgcacacttgtagtcccagctactcggaatgctga-----------agtttgagcctgggaggtcaaggctgcagtgaggcatgattatgccactacagtccagcct-ggtgacagagcaagaccctgtctccaagaa------caaaaca---aca---acaaCCATTTACAGACAGAAAAGAAATAGAGCTAATAA-----GCTGAGGAAAGACGTTGAAATGTGAC----AAGTAGAGTAACATGAGGTCTTTTGTCTATTTAAAATAATCAAACAAAAAATACTTAACTAAATTATAATTCCCT i panTro4.chr17 C 0 I 4353 s ponAbe2.chrUn 67763069 1259 - 72422247 acatttattaggcactttatttc---cattattacactgtaatatataataaaataattatagaactcac-------------cataatgtagaatcagtgggcgtgttaagcttgttttcctgcaactagatggtcccacctgagcatgatgggagaaagtgacagatcaataggtattagattcccataaggac---aacgcaacctagatccctcacatgcacggttcacaacagggtgcgttctcctatgagaatctaatgctgctgctgatct--gagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagcttccctcactccctcactcgacaccactcacctcctgctgtgtggctccttacggctccatggctcaggggttggggacccctgCTCAAATGCATCCAGAACAACCCTTCCCACACCAGTCTTCATAGTGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTTGTCA-----CAATCAACAGTAAGTGGTAGCTTACTTTCCAGGAAGTGAGGTCACTTCCTGGAAATCACCAGCATTCCATTTCTCACTGGCAAAGAGCTCAGCACTGCCCCCTGGGAAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTTTATCTCCTGGGACCCTTCCTAGCAt---attagt--cagagtccaatcaggaagcataaaccactcaaaagtttaaagtt-gtaaaatttaatacagagaattattcattataacaggtgaacagcataatgagagattggctagcacaaagtaaagagaactctagagaatataggactagcCCAggccaggcatggtggctcatgcctgaaattccagcaatttgagaagctaatgcaggaggattgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctatccaagaaaagaaaaaaattagctgggagtggtagtgcacacttgtagtcccagctactcggaatgctga-----------agtttgagcctgggaggtcaaggctgcagtgaggcatgattatgccactacagtccagcct-ggtgacagagcaagaccctgtctcaaagaa------caaaaca---aca---acaaCCATTTACAGACAGAAAAGAAATAGAGCTAATGA-----GCTAAGGAAAGGTGTTGAAATGTGAC----AAGTAAAGTAATATGAGGTCTTTTATCTATTTAAAATAatcaaataaaaaatgacttactaaattataataccct i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46785709 1291 - 99891981 acatttattaggcactttatttc---cattattacatcataatatctaatgaaataattatagaactcac-------------cataatgtagaatcagtgggcgggttaagcttgttttcctgcgactagatggtcccatctgagcatgatgggagaaagtgacagatcaataggtattagattctcataaggac---agcacaacctagatccctcacatgcacggttcgcaatagggtgcatgctcctatgagaatctaatgctgttgctgatctgagagaagggggagctcaggcgggaatgtgagcaatggggagtggctgtaaatacagatgaacct--------tccctcacacgacaccactcatctcctgctgtgtggctccttacagctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAATGACCCTTCCCATACCAGTCTTCATAGTGGTCAACTGCAGCAACTACTTAGCATAGTGGTCAAATGCAGCTGGCATTTGCTCCCAAGGCATGTGCCTTAGCTGGCATGTGCCTCAGCTGGCAATCAACAGTAAGTGGTAGCTTGAGTCAC----TGTGAGGTCACTTACTGGAAATCAATAGCATCCCATTTCCCATTGGTAAGAAGCTCAGCACTGCCCCTTGGATAACCAAACCTATGCCCAAATCCCATCTGTGTGGGTTTATCTCCTGGGACCCTTCCTAGGAt---attagt--cagagtccaatcaggagacataaaccactcaaaagtttgaagtg-gtaaaatttaatacagagaattattcattatgacaggggaacagcataatgagagattggctagcacaaagtaaaaagaactctagagaatacaggactagcCCAggccagacatggtggctcatgcctgaaatttcagcaatttgcgaagctaacacaggaggactgcttaaggccaggagctagagaccagcctggacaacacaatgaggccctgtctctacccaaaaaaagaaaaaatttagctgggagtgatggtgcacacttgtagtcccagctactcaggaagctgaagtgggagggtagtttgagcctgggaggtcaaggctgcagtgagtcatgattatgccactatagtcaagcctgggtgacagagcaagaccctgtctcaaagaa------caaaacaaCCACC---ACCACCATTTACAGACAGAAAAGAAATACAGCTAATAA-----------GAAAGATGTTGAAATGTGAC----AAGTAAAGTAATACGAGGTCTTTTATCTATTTAAAATAATCAAAC-AAAAATAACTTATTAAATTTtaataccct i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763654 1272 + 198365852 acatttattaggcactttatttctattattattacattgtaatatatagtgaaataattatacaactcaccataatgtagaatcataatgtagaatcagtgggcatgttaagcttgttttcctgcaacaagacggtcccatctgagcttgacgggagaaagtgacagatcatcaggtattagattctcacagggac---agtgcaacccagatctctcgcatgcatggttcac-ataggatgcatgctcctatgagaatctaatgctgctgctgatctgagagaaggcggagctcaggtgggaatatgagcaatggggagtggctgtaaatatagatgcagct--------tcccttactcgacaccactcacctcctgctgtgtggctccttatagctccatggctcaggggttggggacccctgCTGATGTACATCCAAAAGGACCGTTCCCACAACAGTCTTCATAGCGGTCAAGTGCAGTAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGCTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCAC----TGTGAGGTCACTTTCTGGAAATCACCAGCATCCCATTTTCCACTGGCAAGGAGCTCAGTATAGTCCCTTGGATAACCAAACTCATGTCCAAATCCCATCTATGTGAGTCTATCTCCAGGGACCCTTCTTAGCAt---atcagt------gtctaatcaggagatgtaaaccactcaaaaatttaaagtgtgtaaaatttaatacagagaattattcattataacaggggaacaacataatgagagactggctagcacaaagtaaagagaactctagaaaatgtaggactagcCCTggtcaggcatggtggctcatgcctgaaattccagcaatttaagaagccaacacaggaggactgcttgaggccagaagctagaggctggcctggacaacacagtgagaccctgtctctattcaaaaaaagaataaaattagctgggagtggtggtgcacacttgtagtcccagctcctcaggaagctgaagcaaaaggatagtttgatcctgggaggtcaaggctgcagtaagtcatgattatgacactagagtcaagcctgggggacagagcaagaccctgcctcaaacaaaaCCACCACCACA---ACA------ACCATTTACAGACAGAAAAGAAATAGAGCTAATAA-----GCTAAGGAAAGATGTTgaaatgtgac--------aaagtaatatgaggtcttttatctatttaaaataatcaaacaaaaaataacttattaaattataataccct i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127685150 1234 - 192294377 atatttattaggtactttatttc---ctttattaaattgtaatagat-gaaaagtaattatagaactcac-------------cataatgtagaatcagtgggcatgttaagcttgttttcctgcgactagatggtcccatctgagcat------agaaggtgacag---attaggcattagattctcatagggacaaaagcacaacctagatccctcacatgcatggttcacaacagggtgcgtgctcctatgagaatctaatgctgctgctgacctgagagaaggtggagctcaggcgggaatgtgagcaaagcggagtggctgtaaatacagatgaagct--------tccctcactcactaccactcacctcctgttgtgtggctccttacagctccatggctcaggggttggggacccccgCTCAAGTGCATCCAAAAGGACCCTTCCCACACCAGTCTTCATAGCGGTCAACTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCAC----TGTGAGGTCACTTACCGGAAATCACCGGCATCCCATTTCCCATTGGCAAGGAGCTCAGCACTGTCCCTTGGAAAATCAAACCTATGCCCAAATCCCACCTGTGTGAGTTTATCTCCTGGGACCCTTCCGAGCAt---attagt--cagagtccaatcaggagacaaaaaccactcaaaagtttaaagtg-gtaaaatttaatccagagaattattcattgtaacaggggaacagcataatgagagattggctagcacaaagtaaagagaactctagaaaaatcaggactagcCCAggccaggcatggtggctcatacccaaaattccagcaatttgagaagctaacacaggaggactgcttaaggccaggagctagagaccggtctggacaacacagtgagaccctgtctctatccaaaaaaagaaaaaaattagctgggagtggtggtacacacttgtagtctcagctactcaggaagctga-----------agtttgagcctgggagatcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctcaaagaa------caaaaca---aca------aCCATTTACAGACAGAAAAGAAATAGAGCTAATAA-----GCTAAGGAAAGATGTagaaatgtgac----aagtaaagtaatatgaggtgttttaccaatttaaaat----aaacaaaaaatgac--attaaattgtaataccct i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 28086 1253 - 317753 ACATTTATTAGGTACTTTATTTC---CACTATTAAATTGTGATATACAGTAAAGTAATTATagaactcac-------------cataatgtagaatcagtgggcaTGTTAAGCTTGTTTTCCTGTGACTACATGGTCCCATCTGAGCATGACGGGAGAAAGTgacagatcattaggcattagattctcatagggac---agcacaacctagatccctcacatgcacggTTCACAACAGGGtgtgtgctcctatgagaatctaatactgcTGCTGACCTGAGagaaggtggagctcaggcgggaATGTGAGCAaaggggagtggctgtaaatacagatgaagct--------tccctCACTCGacaccactcacctcctgttgTGTGGCTCCTTACAGCTCCATGGCTCAGGGGCTGGGGACCCCCGCTCAAGTGCATGCAAAGGGACCCTTCCCACACCAGTCTTCATAGCAGTCAAGTGCAGCAACCACTGA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAATAGTAAGTGGTAGCTTGAGTCAC----TGTGAGGTCACTTACCGGAAATCACCAGCATCCCATTTCCCATTGGCAAGGAGCTCAGCACTGTCCCTTGGAAAACCAAACCTATGCCCAAATCCCATTTGTGTGGGTTTATCTCCTTGGACCCTTCCGAGCAT---ATTAGT--CAGAGTCCAATAAGGAGACATAAACCTCTCAAAACTTTAAAGTG-GTAAAATTTAATCCAGAGAATTATTCATTGTAACAGGGGAATAGCATAATGAGAGATTGGCTAGCACCAAGTGAAGAGAACTCTAGAGAAAACAGGACTAGcccaggccaagcatggtggctcatacctgaaattccagcaatttgagaagctaatgcaggaggattgcttaaggccaggagctagagaccggtctggacaacacagtgagatcctgtctctttccagaaaaagaaaaaacttagctgggagtggtggtgcacacttgtagtcccagctactcaggaagctga-----------agtttgagcctgggagatcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagacgctgtctcaaagaa------caaaaca---acaaccaccaccattgacagacagaaaagaaacagagctAATAA-----GCTAAGGAAAGATGTCAAAATGTAAC----AAGTAAAGTAATATGAGGTCTTTTacctatttaaaataatcaaacaaaaaatGACTTATTAAATTATAATACCCT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124141953 1244 - 127223203 acatttattaggtactttatttc---cattattaaattgtgatatacagtaaagtaattatagaactcac-------------cataatgtagaatcagtgggcatgttaagcttgttttcctgcgactagatggtcccatctgagcgtgacgggagaaagtgacagatcattaggcattagattctcatagggac---agcaaaacctagatgcctcacatgcacggttcacaacagggtgcgtgctcctatgagaatctaatgctgctgctgacctgagagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagatgaagct--------tccctcactcgataccactcacctgctgttgtgtggctccttacagctccatggctcaggggttggggacccctgCTCAAGTGCATCCAAAAGGACCCTTCCCACACCAGTCTTCATAGCGGTCAAGTGCAGCAACCACTTA----------------------------GCTCCCAAGGCATGTGCCTCAGTTGGCAT-TTCATCA-----CAATCAACAGTAAGTGGTAGCTTGAGTCAC----TGTGAGGTCACTTACCGGAAATCACCAGTATCCCATTTCCCATTGGCAAGGAGCTCAGCACTGTCCCTTGGAAAATCAAACCTATGCCCAAATCCCATCTGTGTGAGTTTATCTCCCGGGACCCTTCCGAGtat---attagt--cagagtccaatcaggagacataaaccactcaaaagtttaaagtg-gtaaaatttaatccagagaattattcattgtaacaggggaacagcataatgagagattggctagcacaaagtaaagagaactctagagaaatcaggactagcCCAggccaggcatggtggctcatacccaaaattccagcaatttgagaagctaacgcaggaggactgcttaaggccaggagctagagaccggtctggacaacacagtgagtccctgtctctatccaaaaaaagaaaaaacttagctgggagtggtggtgcacacttgtagtctcagctactcaggaagctga-----------agtttgagcctgggagatcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctcaaagaa------caaaaca---aca---acaaCCGTTTACAGACAGAAAAGAAATAGAGCTAATAA-----GCTAAGGAAAGATGTAGAAATGTGAC----AAGTAAAGTAATATGAGGTCTTTTACCAATTTAAAAT----AAACAAAAAATGAC--ATTAAATTATAAGACCCT i chlSab2.chr21 I 47 C 0 s calJac3.chr2 1422130 1221 + 204313951 acgtttattgggcactttatttc---cattaatacattgtaatatgtgatgaaataattacagagctcac-------------cgtaatttagaattagtgtcca--ttaagcttgttttcctg-agctagacggtcccatctgagtgtgacaggagaaagtgacagatcatcaggcatt--attctcacagggac---cacgcaaccttgatccctggcatgcatggttcacaatggggttcatgctcctaagacaatctaatgttgctgctgatctgagagaaggcagagctcaggcaggaatgtga------------------------------agct--------tccctcactagacatcactcacctcctgctgtgtggctccttacagctccatggctccgggtttggggacctctgCTCAAGTACATTCAAAAGGACCCTTTCCACCCCAGTCATTACAGTGGTCAAGTGCAACAACCACTTA----------------------------GCTCCCAAAGCATGGGCCTCAGCTGGCAT-TTCATCA-----CAATCGACAGTAAGTGGTAGCTTGAGTCAT-------AAGGTC-CCTCCTCGAAATCAGCAGTGTCCCATTTCCCATTGGCAAGGAGCTTGGCACTGCCCCTTGGAAAACCAAACCTATGCCCGAATCCCATCTGTGTGGGTCTATCTCCTGGGACCCTTCCTAGAATCAGCTCTGTAATAgagtgcaatcaggagacataaaccactcaaaagtttaaagtg-gtaaaatttaatat-gagaattattcattataacgggggagcagcataatgagagattggctagcacaaagtaaagag--ctctagagaatataggactggtcaatgccaggcatggtggctcatgcctgaaattccagcaacctaacaggacaatacaggaggactgc-tgaggccaggagctagagaccggcctgggcagcagagcgagaccctgtctctatccacaaaaagaaaaaacttggctgggtgtggaggtgcacacttgtagtcccagctactcaggaagctggagagggagggtagtttgagcctgggaggtcaaggctgcagtgagtcatgattatgccactacagtcaagcctgggtgacagagcaagaccctgtctc--agaa------caaaata---acaaggacaaccatttacaggcag---agaaatagagcTAATAAGCTAAGCTAAGGAAAGGTGTTgaaatgtgacaaataaataaagcaa-atgaggt-ttttatctatttaaaataat-------aaagtaacttattaaagtataataccat i calJac3.chr2 C 0 C 0 a score=3910335.000000 s hg38.chr17_GL383563v3_alt 10437 1430 + 375691 gtgctggcaaaggtgcagtgaaatgggcaccttcttatactatgaggggtgtttaaattgtgtataagccttcccgggtaaagcctgtcaattttttaaaataatggagacagggtctcaccatactgccatactgcctcctccaactcttggcctcaagcaatcctcctctcttagcctcccaa-------------agtgctaagattatagctgggaggcaccCAAAACCCTGTCAATTTACATCAAGGGTAAGGAGAATGTCCATTCACCATGACTCACAGTAATCTTACTTC-----------TGGGGAGACAATTCAATCTAAGCAAAAGGTCATCTGTACACACACAGTAAAAATCTGGGAGTAACTGAAGACAGAGTTGGTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACTATGGTATCAATAGGCACCTGGTA--AAAGGTCAGTTGATGTT-GCTGCTGC-ttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagtgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgactccccctttgtttccaaggcctatcgcaaactcttggcctc-aagccatcctcctgcctcagcctcccaaagtgttgcgattaccagtgtgagccaccacacctggccAGCTGCTACTTTTATCAATATTATTCTTATTCCACTCAATTA---------------AAA-----------------ATTATTATTTTCAAGGCTATGCAACAGTATGTATCCCACAGCGTCATTGT-AAAAACATATA--GTCgtcgtccctcagtatacaga----attagttccagcccccc-atctctgcatataccaaaatccatgcttactcacgtttcgctgtcacccctctggaatccacgtatacgaaaattccaaatgttagttgggcatagtggcaagcacctgtagtctcagccacgtgggaggttgaggtgggaggatcgcttcagcctggaaggttgaggctgcagtcagctgcgatggcactactacactccagccttggacaacagagggagaccctgtctcaga---aaaaaaaaacaaaataaaaCA---------GGTTAGAAATTGTAATGAGGTCTGCTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATCGTGATAAATTAGTACGATTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGGAAAATGCAGAACACAAAGACAGAGAGT-AAAAAGAGAAATTAGGAAAGCATTCTACATGTTGAATAGGAAGACACTGGCCATGTTCGTGCAGCGGCAGTATGTCGTGACATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATC s panTro4.chr4 121830016 1435 + 193495092 gtgctggcaaaggtgcagtgaaatgggcactttcttatactatgagggatgtttaaattgtgtataagccttcccgggtaaagcctgtcaattttttaaaataatggagacaggctctcaccatactgccatactgcctcctccaactcttggcctcaagcaatcctcctctcttagcctcccaa-------------agtgctaagattatagctgggaggcaccCAAAACCCTGTCAGTTTACATCAAGGGTAATGAGAATGTCCATTCACCATGTCTCACAGTAATCTTACTTC-----------TGGGGAGACAATTCAATCTAAACAAAAGGTCATCTGTACAAACACAGTAAAAATCTGGGAGTAACTGAAGACAGAGTTGGTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACTATGATATCAATAGGCACCTGGTATAGAAGGTCAGTTGATGTTAGCTGCTAC-ttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagtgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgactccccctttgtttccaaggcctatcgcaaactcttggcctc-aagccatcctcctgcctcagcctcccaaagtgttgcgattaccagtgtgagccaccacacctggccAGCTGCTACTTTTATCAATATTATTATTATTCCACTCAATTA---------------AAA-----------------ATTATTACTTTCAAGGCTATGCAACAGTATGTATCCTACAGCGTAATCGT-AAAAACATACAcagtcgccatccctcagtatacaga----attagttccagcccccc-atctctgcatataccaaaatccatgcttactcacgtttcgctgtcacccctctggaatccacgtatacgaaaattccaaatattagttgggcatagtggcaagcacctgtagtctcagccacgtgggaggttgaggtgggaggatcgcttcagcctggaaggttgaggctgcagtcagctgcgatagcactactacactccagccttggacaacagagggagaccctgtctcaga---aaaaaaaaacaaaataaaaCA---------GGTTAGAAACTGTAATGAGGTCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATCGTGATAAATTAGTACGATTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGGAAAATGCAAAACACAAAGACAGAGAGT-AAAAAGAGAAATTAGGAAAGCATTCTACATGTTTAATAGGAAGACACTGGCCATGTTCGTGCAGCGGCAGTATGTCGTGACATGACATACCTTGGAGAGAAGTTAACAGATAAGGAAGTTGATAAAAATC i panTro4.chr4 n 4353 C 0 s ponAbe2.chrUn 67764328 1427 - 72422247 gtgctggcaaaggtgcagtgaagtgggcactttcttatactatgaggggtgtttaaattgtgtataagccttccagggtaaAGCttgtcaattttttaaaataatagagacagggtctcaccatactgccatactgcctcctccaactcttggcctcaagcagtcctcctgtcttagcctcccaa-------------agtgctaagattatagctgggaggcaccCAAAACCTTGTCAATTTACATCAAGGGTAACGAGAATGTCCATTCACCATGACTCACAGTAATCTTACTTC-----------TGGGGAGACAATTCAATCTAAACAAAAGGTCATCTGTACAAACACAGTAAACATCTGGGAGTAACCGAAGACAGAGTTGGTCAATGAAATAAGAAACAGTTATAAGAAACTAAACTATGGTATTAATAGGCACCTGGTA--AAAGGTCAGTTGATGTTAGCTGCTAC-ttttttgttgttttgacacagggtctcactctgtcactcaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagtgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgact--ccctttgtttccaaggcctattgcaaactcttggcctc-aagccatcctcatgcctcagcctcccaaagtgttgcgattaccagtgtgagccaccacacctggccAGCTGCTAGTTTTATCAATATTATTATTATTCCACTCAATTA---------------AAA-----------------ATTATTATTTTCAAGGCTATGCAATAGTATGTATCCTACAGCATAATTGT-AAAAACATATAcagtcg---tccctcagtatacaga----attagttccagcccccc-atctctgcatataccaaaatccatgcttactcacgtttcgctgtcacccctctggaatccacgtataGGaaaattccaaatattagttgggcatagtggcaagcacctatagtctcagccacgtgggaggttgagatgggaggatcgcttcagcctggaaggttgaggcagcagtcagctgtaatagcactactacactccagccttggacaacagagggagaccctgtctcag----aaaaaaaaacaaaataaaaCA---------GGTTAGAAATTGTAATGAGGTCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATGGTGATAAATTAGTACGATTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGAAAAATGCAAAACACAAAGACAGAGGGT-AAAAAGAGAAATTAGGAAAGCATTCTACATGTTTAACAGGAAGACACTGGCCATGTTCGTGCAGCAGCAGTATGGCATGATATGACATACCTTGGAGAGAAGTTAACAGACGAGGAAGTTGATAAAAATC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr17 46787000 1455 - 99891981 gtgctggcaaa-gtgcagtgaaatgggcactttcttatactatgaggggtgtttacattgtatataagtcttccagggtaaagcttggcaatTTTTTAAAATAACagagacagggtctcaccatactgccatactgcctcctccaactcctggcctcaagtaatcctcctgccttagcctcccaa-------------agtgctgagattatagctgggaggcatcCAAAACCttgtcaatttacatcaagggtaatgagaatggtcattcaccatgactcacagtaatcttacttctggaaataccttggggagacaattcaatctaaacaaaaggtcatctgtacaaaCACAGTGAAAATCTGGGAGTAACTGAAGACGGAGTGGTTAAGCGAAGTAAGAAACAGTTATAAGAAATTAAACTATGGTATTAATAGGCACTTGGTA--AAAGGTCAGGTGATGTTAGCTGCTAC-ttttttgttgttttgagacagggtctcactctgtcacccaggctggggtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagaaatcctcccacctcagcctcccacctagctggaactacaggaacatgccaccacactaggctaattcttgtatttttctgtacgcatggtgact--ctctttgtttccgaggcctgtctcaaactcttggcctcaaagccatcctcctgcctcagcctcccaaagtgttgtgattaccggtgtgagccaccacactcggccAGCTGCTACTTTTATCAATATTATTATTATTCCACTCAATTA---------------AAAT-TATTTGTCATTAAAGATTATTATTTTCAAGGCTATGAAACA--ATGTGTCCTGCAGCATAATTGT--AAAACATATAcagtcg---tccctcagtatacagagagcattagttccagcccccc-atctctgcttataccaaaatccatgcttactcacgtttcgctgtcacccctctggaacccacatataGGaaaattccaaatattagttgggcatagtggcaagcaactatagtctcagccacgtgggaggttgagatggaaggatcgcttgagcctggaaggttgaggctgcagtcagctgtgatagcactactacactccagccttggacaacagagcgagaccctgtctcag----aaaaaaaaacaaaataaaaCA---------GGTTAGAAATTGTAATGAGGTCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATGGTGATCAATTAGTAAGACTGACTTTCTGGAGTTTCTGACAATAAAAGTAAGAAAAATGCAAAACACAAAGACAGAGGGT-AAAAAGAGAAATTAGGAAAGCATACTACATGTTTAATAGAAAGACACTGGCCATGTTCGTGCAGCAGCAGTATGTCATAATATGACACACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59764926 1455 + 198365852 gtgctggcaaaggtgcagtgaaatggactccttcttatactatgaggggtgtttaaattgtacctaagccttccagggtaaagcttggcaatTTTTTAAAATAAtagagacagggtcttacttt--------actgcctcctccaactcttggcctcaagcaatcctcctgccttagcctcccaa-------------aatgctgggattatagccaggaggcaccCAAAACCttgtcaatttatatcaagggcaatgagaatgtccattcaccatgactcacagtaatctcacttctggaaatacctt-gggagacaattcaatctaaacaaaaggtcatctgcataaaCACGGTGAAATTCTGGGAGTAATCAAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTATATTATGGTATTTATAGGCACCTAGTA--AAAGGTCAGTTCATGTTAGCTGCTAC-ttttttgttgttttgagacagtatctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctctcacctcagc--accaagtagctgagactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgatt--cctttggtttccaaatcctgtctgaaactcttggcctc-aagccaccctcctacctcagcctcccaaagtgttgtgattaccggtgtgagccaccacacctgtccAGCTGCTACTTTTAT---TATTATTATTATTCCACTCaattaaaaataattttcattaaa-----------------attatCATTTTCAAGGTTATGGAACAATATGTGCCCTACAGCATAATTGT-AAAAATATATAcagtca---tccctcagtatacagagaggattagttccagctcccc-atctctgcatataccaaaatccatgcatactcacgtttcactttcagccctctggaacccacatataGGaaaagtccaagtattagttgggcatagtagcaagaatctatagtctcagccacttgggaggctgaggtgcgaggatcgcttgagcctgtgaggttgaggttacggtcagctgtgatggcaccactacactccagcc-tggacaatggagcaagaccctgtctcagaaacaaaacaaaacaaaacaaaaaacaaaaaaTGGGTTAGAAATTGTAGTGAGGTCTATTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATGAAGTAAATGGTGATAAATTAGTATGATTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGT-AAAAAAAGAAATTAGGGAGGCATTCTACATGTTTAATAAAATGACACTGGCCATGTTCATGCAGCAGCAGTATGTCATGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTGATAAAAATG i rheMac3.chr3 C 0 I 310 s macFas5.chr3 127686384 1440 - 192294377 gtgctggcaaagatgcagtgaaatgggcactttcttatactacgaggggtgtttaaattgaatataagccttCCAGGGTAAAGCTTGACaattttttaaaataatagagacagggtctcaccatactgccaaactgcctcctccaactcttggcatcaagcaatccttctggcttagcctcccaa-------------agtgctgagattatagctgggaggcacGCAAAACtttgtcaattgacatcaagggtaatgagaatgtccattcaccatgacttacagtaatcttacttctgcaaataccttggggagacaattcaaTCTAAAC-AAAGGTCATCTGTACAAACACAGTGAAAATCTGGGAGTAACGGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACCATGGTATTAACAGGCAACTGGTA--AAAGCTCAGTTGATGTTAGCTGCTAC-ttttttgttgttatgagacagtgtctcactctgtcacccaggctggagtgcagaggcttgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgacg--ccctttgtttccaaggcctgtctcaaactcttggcctc-aagccatcctcctgcctcagcctcccaaagtgttgtgattactggtgtaagccaccacacctggccAGATGCTACTTTTATCAATATTATCATTACTCCACTCAGTTA---------------AAA-----------------ATTATTATTTTCAAGGCTATGTAATACTATGTGTCCTACAGCATAATTGT-AAAAACATATAcagtcg---tccctcggtatacagacagaattagttccagcccccc-atctctgcatataccaaaatccatgctgactcacgtttcgccgtcacccctctggaacccacgtataGGaaaattccaaatatgagttgggcatagtggcaagcacctatagtctcagccacgtgggaggctgagacgggaggattgcttgagcctgggaggttgaggctgcagtcaactgtgatagcactactacactccagac-tggacaacagaacgagactctgtctcagaaa-aaaacaaaataaaacaaaaCA---------GGTTAGAAATTGTAATGAGGCCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATGGCGATAAATTAGTATGACTGACTTTCTCGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGT----AAAAGAAATTAAGAAAGCATTCAACATGTTTAAGAGGAAGACACTGGCCATGTTTGTGCAGCAGCAGTATGTCACGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTCATAAAAATG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 29339 1421 - 317753 GTGCTGGCAAAGGTGCAGTGAAATGGGCACTTTCTTATACTATGAGGGGTGTTTAAATTGTATGTAAGCCTTCCAGGGTAAGgcttgacaattttttaaaataatagagacagggtctcaccatactGCCAAACTGCCTCCTCCAACTCttggcatcaagcaatcctcctgtcttagcctccaaa-------------agtgctgagatgataGCTGGGAGGCACCCAAAACCTTGTCAATTTACATCAAGGGTAATGAGAATGTCCATTCACCATGACTCACAGTAATCTTATTTCTGGAAATACCTTGGGGTGACAATTCAATCTAAACAAAAGGTCATCTGTACAAACACAGTGAAAATCTGGGAGTAACTGAAGACAGAGTGGTTAACTGA---AAGAAACAATTATAAGAAATTAAACCATGGTATTAATAGGCATCTGGTA--AAAGGTCAGTTGATGTTAGCtgctactttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagatgcCTGATCGTGACTCACTGtagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctggggctacaggaacATGCT----------TGTAATTCACGTATTTTTCTGTAGGGATGGTGACT--CCCTTTGTTTCCGAGGCCTATCTCAAACTCTtagcttc-aagccatcctcctgcctcagcctcccaaagtgttgtgatgaccggtgtaagccaccacacctggccagctgttacttttatcaatattattattattccactcagtta---------------aaa-----------------att---attttcaaggctATGCAACAGTATGTGTCCTACAGCACAATCGTAAAAAACATATACAGTCG---TTTCTCAGTATACAGACAGAATTAGTTCCAGCCCCCCAATCCCTGCATATACCAAAATCCATGCTTACTCACATTTCGCCGTCACCCCTCTGGAACCCATGTATAGGAAAATTCCAaatattagttgggcatagtggcaagcacctatagtctcagccacatgggaggccgagatgggaagatcgcttgagcctgggaggttgaggctgcagtcaactGTGATAgcactaccacactccagcc-tggacaacagagcaagacactgtctcagaaacaaaacaaaac------aaaca---------ggttAGAAATTTTAATGAGGCCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATGAAGCAAATGGTGATAAATTAGTACGACTGACTTTCTGGAGTT--TGACAATAAAGGTAAGAAATATGCAAAAC----AGACAgagggttaaaaaaagaaattaggaaagcATTCTACATGTTTAATAGGAAGACACTGGTCATGTTCATGCAGCAGCAGTATGTCATGATATGACGTACCTTGAAGAGAAgttaacagatgaggaagttgaTAAAAGTG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124143197 1438 - 127223203 GTGCTGGCAAAGATGCAGTGAAATGGGCACTTTCTTATACTATGAGGGGTGTTTAAATTGTATATAAGGCTTCCAGGGTAAAGCTTGACaattttttaaaataatagagacagggtctcaccatactgccaaactgcctcctccaactcttggcatcaagcaatcctcctgtcttagcctcccaa-------------agtgctgagattatagctgggaggcacccaaaaccttgtcaatttACatcaagggtaatgagaatgtccattcaccatgactcacagtaatcttacttctgcaaataccttggggagacaattcaatctaaac-aaaggtcatctgcacaaaCA--GTGAAAATCTGGGAGTAACGGAAGACAGAGTGGTTAAGTGAAATAAGAAACAGTTATAAGAAATTAAACCATGGTATTAACAGGCAACTGGTA--AAAGGTCAGTTGATGTTAGCTGCTAC-ttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgatcatgactcactgcagtctcagcctccctgggctcaagcgatcctcccacctcagcctcccaagtagctgggactacaggaacatgccaccacactaggctaattcatgtatttttctgtagggatggtgact--ccctttgtttccaaggcctgtctcaaactcttggcctc-aagccatcctcctgcctcagcctcccaaagtgttgtgattactggtgtaagccaccacacctggccAGCTGCTACTTTTATCAATATTATTATTACTCCACTCAGTTA---------------AAA-----------------ATTCTTATTTTCAAGGCTATGTAACAGTATGTGTCCTACAGCATAATTGT-AAAAACATATAcagtcg---tccctcggtatacagacagaattagttccagccccac-atctctgcatataccaaaatccatgcttactcacgtttcgccgtcacccctctggaacccacgtataGGaaaattccaaatattagttgggcatagtggcaagcacctatagtctcagccacgtgggaggctgagacggggagactgcttgagcctgggaggttgaggctgcagtcaactgtgatagcactactacactccagac-tggacaacagaacgagactctgtctcagaaa-aaaacaaaataaaacaaaaCA---------GGTTAGAAATTGTAATGAGGCCTGTTGGGCAAAATTCCATATAAGCAAAGTATAAATTAATAAAGCAAATGGCGATAAATTAGTATGACTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACAGAGGGT----AAAAGAAATTAAGAAAGCATTCAACATGTTTAAGAGGAAGACACTGGCCATGTTTGTGCAGCAGCAGTATGTCACGATATGACATACCTTGGAGAGAAGTTAACAGATGAGGAAGTTCATAAAAATG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1423351 1404 + 204313951 gtgctgggaaaggtacggtgaagtgggcactttcttatactgtgggggatgtttaaattgtacataatccttccaaggtaaagctcagcaattgttttaagTAATAGAGACAGTGTCTCACCATactgc---------------------tggcctcaagcaatcctcctgccttagcctccctccctccttaggcttagtgccgggattatagctgggaggcaccCAACACCTTGTCAATTTACATCAAGGGCAATGAGAATGTCCATTCACCGTGACTCACAGTACTCTCACTTCTGAAAATACCTT-GGGAGACAATTCAACCTAAACCAAAAGTCATCTGCACAAACAC--TGAAAATCTGGGAGTAATTTCAGACAG----GTTAAGTGAAAT---AAACAGTTATAAGAAATTGAATTAGGGTATTTTTAGGCCCCTGGTG--AAAGAGCAGTTAGTGTTAGCTGCTGG-ttttttgttgttttgagacagggtctcactctgtcacccaggctggagtgcagaggcctgattatgactcactgcagtctcagcctccctggactcaagc--------------------------agctgggactacaggcacatgccaccacgctaggctaattcatgtatttttccactggggtagtgact--ccctttgtcaatgaggcctgtctcagactcttggcctc-aggccatcctcctgcctcagcctcccaaagtgttgtgattaccggtgtcagccaccacatttggccAGCTGCt--tttta--aaaattattattattCGACTCAATTA---------------AAACATATTTGGTACTAAC-ACTATCATTTTCAAGGCTATGGAACAATACGTGTCCTCCAGCATAACTGT-AAGAACATCTAcagtca---cccctcagtgtaaagacaggattacttccagctcccc-atctctgcacataccaaacttcatgcatactcacatttca--gtcagccctctggaacccacgtataggagaagtcgAAATACTGGTTgggcataatggcaaacacctatagtctcagccatttgggaagctgaggtgggaggatcgcttgaacctgggaggtcatggctgcattcagctgtgatagcaccactgcactgtggca-tggacaatagagcaagaccctgtctcagaag-aaaaCATAATAATAACCAACA---------GGTTAGAAATTGCAATGAGGGCTGATGGGGAAAATTCCACAGAAGCAACGTACACATTAATGAAGCAGACGGTGATAAATCAGTACAACTGACTTTCTGGAGTTTCTGACAATAAAGGTAAGAAAAATGCAAAACACAGAGACGGAGCAT-AAAAAAAGAAATTAAGGAGGCATT-TACGTGTACAATAGGGTGACCCTGGCTGTGTTTGTGCA---GCAGTGTGTCACGATGTGACCTA-CTTGAAGATGAGTTAAC-GACGAGTGAGTTGATAGAAATG i calJac3.chr2 C 0 C 0 a score=1198386.000000 s hg38.chr17_GL383563v3_alt 11867 453 + 375691 ATCAGAGAAGCAAAATACTGGTAGCGACACTCAAGTAAACCAT--GAAATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCTATACAACATTGTTTATCTGCCTTTTGTTTGTTTGT----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTTAACTTATTCTTCTGTTTTTC---TTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAATTT-----CTTTTTTAGAAAATTGAACAAGTGCTCCTTgtggtggcacatgcctcgaggatgggaggcaggggtggaagggtcacttgaggccattagt-ttgacaccagcctggccaacaaagtgagaccccgtgtctacaaaacaatttaaaaattagccaagtatcatcatgtatacctacagtcccagctac s panTro4.chr4 121831451 453 + 193495092 ATCAGAGAAGCAAAATACTGGTAGCGACACTCAAGTAAACCAC--GAAATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTTAAGTTCCTATACAACATTGTTTATCTGCCTTTCGTTTGTTTGT----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTTAACTTATTCTTCTGCTTTTC---TTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAATTT-----TTTCTTTAGAAAATTGAACAAGTGCTCCTTGTGGTGGCACGTACCTCTAGGAtgggaggcaggggtggaagggtcacttgaggccattagt-ttgacaccagcctggccaacaaagtgagaccccatgtctacaaaacaatttaaaaattagccaagtatcgtcatgtatacttacagtcctagctac i panTro4.chr4 C 0 I 3219 s ponAbe2.chrUn 67765755 449 - 72422247 ATCAGAGAAGCAAAATACTGGTAGCGACACTTAAGTAAACCAC--GAAATTTCCGTAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCTATACAACATTGTTTATCTGCCTTTTGTTTGTTTGT----GAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTTAACTTATTCTTCTGTTTTTC---TTTGATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAATTT-----TTTTTTTAGAAAATTGAACAAGTGCTCCCTGTGGTGGCACATACCTCTAGGAtgggaggcaggggtggaagggtcacttgaggccatgagt-ctgacaccagcctggccaacaaagtgagaccccatgtctacatgg----ttaaacattagccaagtatcgtcatgtatacctacagtcccagctac i ponAbe2.chrUn C 0 N 0 s nomLeu3.chr17 46788455 450 - 99891981 ATCAGAGAAGCAAAATACTGGTAGCGACACTC----AAACCAC--GAAATTTCCATAACTTATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCTATACAACATTGTTTATCTGCCT----TTTGTTTGT----AAGGAATGTATATACTAAAAGTTCTTCCTGCTGTCAAAAGAATATGTGTGAATAAGTCATTTTGACTTAATCTTCTGTTTTTC---TTTTATCTTCCTGCCATCATCCCACAGCCTTACTTTAGAAATTTTT-TATTTTTTTAGAAAATTGAACAAGTGTTCCTTGTGGTGGCACATACCTCTAGGAtgggaggcagggatggaagggtcacttgaggccatgagcgttgacaccagcctggccaacaaagtgagaccccatgtctacaaaacagtttaaaaattagccaagtatcgtcatgtatacctacagtcccagctac i nomLeu3.chr17 C 0 T 3452 s rheMac3.chr3 59766691 466 + 198365852 ATCAGAGAAGCAAATTACTGATAGTGATAGTTAAGTAAACCATGAAGAATTTCCACAACTGATGTCAGCAAAGTGGAAATATTGTACAGTGTGTGTTGAAGTTCCTGTACAACATTGTTTATTTGCCTTTTGTTTGTAAGAAATGAAGAAATGTATCTACTAAAAGTTCTTCTTGCTGTCGAAAGAATATGTGTGAATAAGTCATTTGAACTTATTCTTCTGTTTTTCTACTTTGATCTTTCTGCCATCATCCCACAGCCTTACTATAGAAATTTCT-TATTTTTTTAGAAATTTGAACAAGTGCTTGTTgtggtggctcatacctctaggatgggaggcaggggtggaagggtcactcgaggccaggagt-ttgacaccagcctggccaacaaagtgagaccccatgtctacaaaacaatttaaaaattagccaggtatcatcatgtatacctacagtcccagctac i rheMac3.chr3 I 310 T 3609 s macFas5.chr3 127687824 456 - 192294377 ATCAGAGAAGCAAAATACTGATAGCAATACTCAAGTAAACCAC--AAAAGTTCCATAACTCATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGACGTTCCTATACAACACTGTTTATTTGCCTTATGTTTGTTTGC----AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTG----TAAGTCATTTGAACGTATTCTTCTGTTTTTCTATTTTTATCTTCCTGCCATCATCCTACAGCTTTACTTTAGAAATGTTT-TATTTGTTTAGAAAATTGAACAAGTGCTCGTTGTGGCAGCTCCTACCTCTAGGAtgggaggcaggggtgaaagggttacttaaggccaggagt-ttgacaccagccaggccaacaaagtgagaccccatgtccacaaaacaatttaaaaattagccaagtgtcgtcatgtatacctatagtcccagctac i macFas5.chr3 C 0 I 3249 s papAnu2.JH684865 30760 460 - 317753 ATCAGAGAagcaaaatactgatagtgatagTCAAGTAAACCACAAAGAATTTCCATAATTGATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGAAGTTCCCATACAACATTGTTTAtttaccttttgtttgtttgt----aaggAACATATATACTAAAAGT--TTTTTGTTGTCAAAAGAATATGTGTGAATAAGCCACTTGAActtattcttctgtttttctacttttatcttcCTGCCATCATCCCACAGCCTTactttagaaattttt-tatttttttagaaaattgaaCAAGTGCTcgttgtggtggctcatacctctagGATGGGTGGCAGGGGTAGAagggtcacttgaagtcaggagt-ttgacagcagccAGGCCAACAAAGTGAGGCTCCCtgtctacaaaacaatttaaaaattagccaactgtCGTCATGTatacctacagtcccagctac i papAnu2.JH684865 C 0 I 2779 s chlSab2.chr21 124144635 448 - 127223203 ATCAGAGAAGCAAAATACTGATAGCAATACTCCAGTAAACCAC--AAAATTTCCATAACTCATGTCAGCAAAGTGGGAATATTGTACAGTGTGTGTTGACGTTCCTATACAACACTGTTAATTTGCCTTATGTTTGC--------AAGGAATGTATATACTAAAAGTTCTTCTTGCTGTCAAAAGAATATGTG----TAAGTCATTTGAACATATTCTTCTGTTTTTCTATTTTTATCTTCCTGCCATCATCCTACAGCCTTACTTTAGAAATGTTT-TATTTGTTTAGAAAATTGAACAAGTGCTCATTGTGGCAGCTCATACTTCTAGGAtgggaggcaggggtgaaagggttacttaaggccaggagt-ttgaca----ccaggccaacaaagtgagaccccatgtccacaaaacaatttaaaaattagccaagtgtcgtcatgtatacctatagtcccagctac i chlSab2.chr21 C 0 T 3397 s calJac3.chr2 1424755 445 + 204313951 ATCAGAGGAGCAAAATACCGAGAGCGATAGTTAAGA---------AGAATCTCCCTGAGCGATGTCAGAAAAGTGGGGATATTG--CAGTGTGTATTGGAGCTCCTGTACAACACTGTTTATCTGCCTTTTGTCTG---------TAAAAACATATCTACTAAAAGTTCTTCTTGCTGTCAAAAGAGTATGTGGGAATAAATCATTAGAATTTATTCTTTTGTTTTTC-ACCTTTATCTTCCTGCCATCATCCCACAGCCTCACTTTAGAAATGTTTGTTTTTTTTTAGAAAATTGAACAAGTGTTCATTGTGGTGGATCATACCTCTAGGAtgggaggtgggggtagaagggtcacttgaggccaggagt-ttgacaccagcccgaccaaaaaagtgagaacccatgtctataaaa-attttttaaattaaccaggtgtcatcatttatacctacagtcccagctac i calJac3.chr2 C 0 I 23395 a score=0.000000 s hg38.chr17_GL383563v3_alt 12320 10 + 375691 CTGAACTTAC e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124145083 3397 - 127223203 T e papAnu2.JH684865 31220 2779 - 317753 I e rheMac3.chr3 59767157 3609 + 198365852 T e macFas5.chr3 127688280 3249 - 192294377 I e nomLeu3.chr17 46788905 3452 - 99891981 T e panTro4.chr4 121831904 3219 + 193495092 I a score=37530.000000 s hg38.chr17_GL383563v3_alt 12330 152 + 375691 TGAGAAAGTTCAGAGCCTGGAGAGAAGGCTGGGAGGCAGGAGCTGGGTCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCTGTGGAGGCTGCTGTGAGGCAGTAGGCTCATCTGCGGAGGCTGCCGTGACGTAGGGTATGGGCCTAAATAG s nomLeu3.chr17 46785453 152 - 99891981 TGAGAAAGTTCTGGGCCTGGAGAGAAGGCTGGGGGGCAGGAGCTGGGCCTAAAGAGGCCATTGTAACGATGGAGCTGTGCCTGTGGAGGCTGTTGTGCGGCAGTAGCCTCATCTGCAGAGACTGCCGTGAGGTAGGGTATGGGCCTAAATAG i nomLeu3.chr17 T 3452 C 0 s chlSab2.chr21 124141686 152 - 127223203 TGAGAAAGTTCTGGGCCTGGAGAGAAGACTGGGAGGCAGGAGCTGGCTCTAAAGAGGCCGTGGTAACGATGGAGCTGGGCCTGTGGAGGCTGTTGTGAGGCAGTAGCCTTATCTGTGGAGACTGCTGTGAGGTAGGGCACGGGCCTAAATAG i chlSab2.chr21 T 3397 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e papAnu2.JH684865 31220 2779 - 317753 I e rheMac3.chr3 59767157 3609 + 198365852 T e macFas5.chr3 127688280 3249 - 192294377 I e panTro4.chr4 121831904 3219 + 193495092 I a score=30618.000000 s hg38.chr17_GL383563v3_alt 12482 68 + 375691 GCCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCTGACTGGAGAAAGTTCTGGGCCTGGAGAGGCTGC s nomLeu3.chr17 46785605 66 - 99891981 GCCATTGTGAGCCATGAGCTTGG-CTATAGAGACCGACTGGAGAAAGATCTGGGCC-AGAGAGACTGC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59763548 68 + 198365852 GCCATTGTGAGCCATGAGCTTGACCCGTAGAGGCCGACTGGAGAAAGTTCTGGACCTGGAGAGGCTGC i rheMac3.chr3 T 3609 C 0 s chlSab2.chr21 124141838 68 - 127223203 ACCATTGTGAGTCATGAGCTTGGTCTGTAGAGGCCGACTGGAGAAAGTTCGGGGCCTGGAGAGGCTGC i chlSab2.chr21 C 0 I 6706 e calJac3.chr2 1425200 23395 + 204313951 I e papAnu2.JH684865 31220 2779 - 317753 I e macFas5.chr3 127688280 3249 - 192294377 I e panTro4.chr4 121831904 3219 + 193495092 I a score=5927.000000 s hg38.chr17_GL383563v3_alt 12550 24 + 375691 CGGGAGGTAGGAGCTGGGCCAAAA s nomLeu3.chr17 46785671 24 - 99891981 CAGGAGGCAGGAACTGGGCCAAAA i nomLeu3.chr17 C 0 I 7370 s rheMac3.chr3 59763616 24 + 198365852 CAGGAGGCAGGAGCTGAGCCAAAA i rheMac3.chr3 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e papAnu2.JH684865 31220 2779 - 317753 I e macFas5.chr3 127688280 3249 - 192294377 I e panTro4.chr4 121831904 3219 + 193495092 I a score=983.000000 s hg38.chr17_GL383563v3_alt 12574 14 + 375691 gatgtaagcacatt s rheMac3.chr3 59763640 14 + 198365852 gattcaagcacatt i rheMac3.chr3 C 0 I 11776 e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e papAnu2.JH684865 31220 2779 - 317753 I e macFas5.chr3 127688280 3249 - 192294377 I e nomLeu3.chr17 46785695 7370 - 99891981 I e panTro4.chr4 121831904 3219 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 12588 472 + 375691 tgcatttattaggcactttatttccattattacactgtaatatataataaaataattatagaactcaccataatgtagaatcagggggcgtgttaagcttgttttcctgcaactggatgttcccacctgagcgtgatgggagaaagtgacagatcaataggtattagattctcataaggacagcgcaacctagatccctcacatgcacggttcacaacagggtgcgttctcctatgagaatctaacgctgctgctcatctgagaaggtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaatacagacgaagcttccctcactccctcactcgacacagctcacctcctgctgtgtggctccttgcggctacatggctcaggggttggggacccctgCTCAAGTGCATCCAAAGCGACCCTTCCCAAGCCAGTCTTCACAGTGGTCAAGGGCAGCAACCACTT e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e papAnu2.JH684865 31220 2779 - 317753 I e rheMac3.chr3 59763654 11776 + 198365852 I e macFas5.chr3 127688280 3249 - 192294377 I e nomLeu3.chr17 46785695 7370 - 99891981 I e panTro4.chr4 121831904 3219 + 193495092 I a score=15777.000000 s hg38.chr17_GL383563v3_alt 13060 201 + 375691 AGCTCCCAAGGCATGTGCCTCAGCTGGCATTTCGTCACAATCAACAGTAAGTGGTAGCTTGAGTCACTGTGAGGTCACCTACTGGAAATCACCAGCATCCCATTTCCCACTGGCAAAGAGCTCAGCACTGCCCCCTGGGAAACCAAACCTATGCCCAAATCCCATCTGCGTGGGTCTACCTCCTGGGACCCTTCCTAACAT s rheMac3.chr3 59775430 201 + 198365852 AGCTCACACGGCATATGCCTCAGGTGGCATTTCATCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCAGTTCCTGGAAATCACCAGCATCCCATGTCCCACTGGCAAGGAGCTCAGCACTGCTCCGTGGATAACCAAACCCATGCCCAAATCCCATCTGTGTGGGTCTATCTCCTGGTATCCTTCCTAGCAT i rheMac3.chr3 I 11776 T 1572 e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e papAnu2.JH684865 31220 2779 - 317753 I e macFas5.chr3 127688280 3249 - 192294377 I e nomLeu3.chr17 46785695 7370 - 99891981 I e panTro4.chr4 121831904 3219 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 13261 15 + 375691 ATAACCTTCATAACA e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e papAnu2.JH684865 31220 2779 - 317753 I e rheMac3.chr3 59775631 1572 + 198365852 T e macFas5.chr3 127688280 3249 - 192294377 I e nomLeu3.chr17 46785695 7370 - 99891981 I e panTro4.chr4 121831904 3219 + 193495092 I a score=299389.000000 s hg38.chr17_GL383563v3_alt 13276 1202 + 375691 TACttgagaggctgaggtgagacaatcaatttagcccaggagtttgagatcagcctggacgacataactaaatctcatctctacaaggacgaggtgggaggatcacttgagcccaggaatttgtggccagcctgggcaacaaaagaagaccccatctggccaacatggccaacctggccaccacggtgaaactctgactctacaaaaatgatctgggcatgggtgacatgcatgtgtagtcctagctacttgggaggttgagatgggaggattgcttgatctcagaaggccaaagctatagtgagctatgatcacatcactgcactccagcctggatggcacagggagattctgtctcaaaaaaaagaaaagaaatatatatttaatctctgtccctggttcctggcacagagcttctaaagctcttacaaagacctcagtgatagatgtgacaggagcatcttttgttttaatatttggtcttggtcccaggtttctaacacaagagcctctaagaactttgggatctccagcatggtaagaatgcatttggggatgttgttgagatgactgggtgactgcaagctcctaaatttcttcaagaggagggctgattaccat-----gcaaccacatggtaagaggcttggaactttcagcctcatgcactgaactccagggggaagaggggctggagactgacttaatcaccaacagccaaaggttttatcaatcatgcttgcataataaagcctccataaacaccctgaaaggggtttgcagagctttcagggttgctggacacaggagatgctgggagggtcgcatgttcaacagagggcatgggagctctgtgcccctccgaacttaacttgccctgggtatctttcttttttttgagacaggatcaggctctgttgtccaagctggagtgcagtggcacaatctcagcttactgtaacctaagcctccccagtccccagctcaaggtatcctctcatctcagcttccctagtagttggaactctaggtgcacaacaccaca-ccagttattattattattttttaattttttatagagacaagttttcaccatgttgcccaggctggtctcaaactcctgagtttaagcgatcctcccaccttggcctcccaaagtgctgagattacaggcatgagccactgcatccagcatgcacgtctcttt s panTro4.chr4 121835123 1194 + 193495092 tacttgagaggctgaggtgagacaatcgatttagcccaggagtttgagatcagcctggacaacataactaaatctcatctctacaaggacgaggtgggaggatcacttgagcccaggaatttgtggccagcctgggcaacaaaa-aagaccccatctggccaacatggccaacctggccaccatggcgaaactctgactctacaaaaatgagctgggcatgggtgacatgcatgtgtagtcctagctacttgggaggttgagatgggaggattgcttgatctcaggaggccaaagttatagtgagctatgatcacatcactgcactccagcctggatgacacagg-agattctgtctcaaaaaaaagaaaagaaatatatatttaatttctgtccctggttcgtggcacagagcttctaaagctcttacaaagacctcagtgatagatgtgacaggaacatcttttgttttaatatttggtcttggtcccaggtttctaacacaagagcctctaagaactttgggatctccagcatggtaagaatgcatccggggatgttgttgagatgactgggtgactgcaggctcctaaatttcttcaagaggagggctgattaccat-----gcaaccacatggtaagaggcttggaactttcagcctcatgcactgaactccaggaggaagaggggctggagactgacttaatcaccaacagccaaatattttatcaatcatgcttgcataataaagcctccataaacaccctgaacggggtttgcagagctttcagggttgctggacacaggagatgctgggagggtggcatgttcaacagagggcatgggagctctgtgcccctccgaacttaacttgccctgggtatctttcttttttttgagacaggatcaggctcttttgtccaagctagagtgcagtggcacaatctcagcttactgtaacctaagcctccccagtccccagctcaaggtatcctctcatctcagcttccctagtagttggaactctaggtgcacaccaccaca-ccggttattatt------ttttaattttttatagagacaggttttcaccatgttgcccaagctggtctcaaactcctgagtttaagcgatcctcccaccttggcctcccaaagtgctgagattacaggcatgagccactgcatccagcatgcatgtctcttt i panTro4.chr4 I 3219 C 0 s papAnu2.JH684865 33999 1198 - 317753 tactcgagaggctgaggtgagacaaTCGATTTtgcccagcagtttgagatcagcctgggtgacacaactaaatctcatctctacaaggatgaggtgggaggatcactggagcccaggaatttgtggccagcctgggcaatacaacaagaccccatctggccaacatggccaaactggccaacatggtgaaactccgactctacaaaaatgagctgggcataggTGACATGCaagtgtagtcctagctacttggaaggctga---ggaaggatcGCTTGATCACAGGAGATCAAAGCtataatgagctatgatcacatcactgcactctagcctggatgacacagggagattctatctcaaaaaaaagaaaagaaatatatatttaatctctGTCCCTGGTTTCTGGCACACAGCTTCTAAAGCTCTTACAAACACCTCAGTGATAGACATGATAGGAGtatcttttgttttaatatttggtCTTGGTCCCAGGTTTCTAACACAAGAGCATCTAAGAACTTTGGGATCTCCAGCATGGTAAGAATGCATTTGGGGATGTTGTTGAGATGACTGGGTGACTGCAAGCTCCTAGA--TCTTCAGGAGGAGGGCTGATTGCCAGAGGAAGCAACCACATGATTAGAGGCTTGGAACTTTCAGCCTCATGCACTGAACTCCAGGAGGAAGAGGGGCTGGAGACTGACTTAATCACCAACGGCCAAAGATTTTGTCAATCATGCTTGCATAATAAAGCCTACATAAACACCCTGAACAGGGTTTAAAGAGCTTCCAGGGTTGCTGAACAC---AGATGCTGGGAGGGTGGCATGCCCAACAGAGGGCATGGGAGTGCTGTGCCCCTCCTAACTTACCTTGACCTGggcatcttccttttttttgagacagggtctggctcttttgtccaagctagagtgcagtggcacaatctcagctcactgtaatctaaGCCTCCCCAGTCCCCAGCTCAAGGCgtcctctcatctcagcttccTTAGTAGTTGGAACTCTAGGGGCACAACACAACATCCggttattagtattat-tttttattttttgtagagaca-gttttcaccatgttgcccaggctggtctgaaactcctgagtttaagcgatcctcccacctcggcctcccaaagtgctgagataacaggcgtgagccaccgcatccagcatGTTCATCTCTTT i papAnu2.JH684865 I 2779 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e rheMac3.chr3 59775631 1572 + 198365852 T e macFas5.chr3 127688280 3249 - 192294377 I e nomLeu3.chr17 46785695 7370 - 99891981 I a score=49051.000000 s hg38.chr17_GL383563v3_alt 14478 99 + 375691 cattgactgtttctgagatgtatccttcacaatgaaccagtaataggaaatgaactggccagatgtggt-ggctcacatctgtaatcccagcactttcag s panTro4.chr4 121836317 99 + 193495092 cattgactgtttctgagatgtatccttcacaatgaaccagtaatacgaaatgaactggccagatgtggt-ggctcacatctgtaatcccagcactttcag i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46793065 99 - 99891981 CAttgactgtttctgaaatgtatcctt-gcaatgaaccagtaataggaaatgaactggccagatgtggtgggctcacatctgtaatcctagcactttaag i nomLeu3.chr17 I 7370 C 0 s papAnu2.JH684865 35197 99 - 317753 CATTGGTTGTTTCTGAGATGTATCCTTTACAATGAACCAGTAATAGGAAATGAactggccagatgcggt-ggctcacatctgtaatcccagcacttcaag i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e rheMac3.chr3 59775631 1572 + 198365852 T e macFas5.chr3 127688280 3249 - 192294377 I a score=116880.000000 s hg38.chr17_GL383563v3_alt 14577 203 + 375691 aggctgaggtgggaggatcacttgagaccaggaatttgtggccagcctggccaa--caca-a-caagac--------cccatctatacaaaaaataaa----agaaactagccagatgtggtggt-gcaggcat--gtagtctcagctactagggaggctgaggtgggagaaccactggaacccagacaatcaaggctgcaatgagctatg-------actgcacc---------------------------------------------------att s panTro4.chr4 121836416 203 + 193495092 aggctgaggtgggaggatcacttgagaccaggaatttgtggccagcctggccaa--caca-a-caagac--------cccatctatacaaaaaataaa----agaaactagccagatgtggtggt-gcaggcat--gtagtctcagctactagggaggctgaggtgggagaaccactggagcccagacaatcaaggctgcaatgacctatg-------actgcacc---------------------------------------------------att i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46793164 199 - 99891981 aggcagaggtgggaggatcacttgagaccaggaatttgtggccagcctgggcaa--caca-accaaaac--------cccatctatacaaaaaat---------aaattagccagatgtggtggt-gcaggtat--gtagtctcagctactagggaggctgaggtgggagaaccattggagcccaggcagtcaaggctgcagtgagctatg-------actgcacc---------------------------------------------------att i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127691529 274 - 192294377 aggatgaggtgggaggatcacttgagcccaggaatttgtggccagcctgggcaa--caca-a-caagaccccatctggccaacatggtgaaacaccgactacaaaaatgagctaggcatg--ggtgacatgcatgtgtagtcccagctacttcggaggctgaggtgggagaatcgcttgatctcaggaggtcaaagctataataaactatgatacatcatcgcaccccagcctggatgacacagggagattctgtcccaaaaaaaaagaaaagaaaTATA i macFas5.chr3 I 3249 C 0 s papAnu2.JH684865 35296 202 - 317753 aggctgaggtgggaggatcacttgagtccaggaactTATGTCCAGGCTGGGCAAACCACACA-CAAAA---------GCCatcaatgcaaaaaataaa----agaaattagccagatgtgttggT-ACAGGCAT-----GTCtcagcaactagggaggctgaagtgggagaaccaCTGGAGCCCAGgcagtcaaggctacagtaagctatg-------actgcacc---------------------------------------------------act i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124141906 6706 - 127223203 I e rheMac3.chr3 59775631 1572 + 198365852 T a score=885956.000000 s hg38.chr17_GL383563v3_alt 14780 712 + 375691 gcacaccagcctgggcaacaaaataagaccctctctctcagaaaaaaagaaaataaactg---tttttctgagttccgtaaactgttctagcaaattattaaacccaagaagacagttacgggaacccccgattggtaacaggttggtcaaaagtat-ggtgacaacttaggacttgccattgtcatctgaagtgaggatggcctcgtgggactgagcccctaacttgtggggtctgtgctaactccaggtagtgtcagaataaagtcatgggatacccagttaatatccagagcactgaagaatctggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacaTGGGCTTTTCTGTCAC----CTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaaacattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcctgcgcaaatcattcattattcctaaggttttcatcactccattcataaaatggggataactgtggcacctacatgtgattctgtgagaattaacgaaatattatgcttgGGGTTATTGTGATCATTATACCTGTTCCAAACTATTTGACAAGGACAGTGATGGATGAAGACATCAAAAAATCAGAAACTGCAATGAGGTCTCTCAGGCAAAATTCCATACAAGCAAAT s panTro4.chr4 121836619 711 + 193495092 gcacaccagcctgggcaacaaaataagaccctctctctcagaaaaaaagaaaataaactg---tttttctgagttccgtaaactgttctagcaaattattaaacccaagaagatagttatgggaacccccgattggtaacaggttggtcaaaagtac-ggtgacaacttaggacttgccattggcatctgaagtgaggatggcctcatgggactgagcccataacttgtggggtctgtgctaactccaggtagtgtcagaataaagtcatgggatacccagttaatatccagagcactgaagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacaTGGGCTTTTCTGTCAC----CTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaaacattaaagtcagaccaaacccaacatctgactcagtcttaatatccaggtgagcttgggcaaatcattcattattcctaaggctt-catcactccattcataaaatggggataactgtggcacctacctgtgattctgtgagaattaacgaaatattatgcttgGGGTTATTGTGATCATTATACCTATTCCAAACTATTTGACAAGGACAGTGATGGATGATGACATCAAAAAATCAGAAACTGCAATGAGGTCTCTCAGGCAAAATTCCATACAAGCAAAT i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46793363 716 - 99891981 gcacaccagcctgggcaaaaaaataagaccctctctctcagaaaaaaagaaaataaactg---tttttctgagttctgtaaactgttgtagcaaattattaaacccaagaatagagttatgggaacccctgacttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccattagcatctgaagtgaggatggtctcgtgggactgagcccctaacttgtggggtctgtgctaactccaggtagtgtcagaataaaatcgtgggatacccagttaatatccagagcactggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgggcagagacaaacatgggcttttctttcacCTGTCTACCTGCTTTACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcttgggcaaatcactcattattcctaagtctt-catcacttcattcgtaaaatggggataactgtggcaccaacctgtgattctgtgaggattaacgaaatattatgcttgGTGTTATTGTGATCATTATACCTATTCTAAACTATTTGACAAGGACAGTGATGGATGACAACATCAAAAAATTAGAAACCATAGTGAGATCTCTCAGGCAAAATTCCATACAAGCAAAT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127691803 716 - 192294377 gcacaccagcctgggcaacaaaataagaccgtctctctcagaaaaaaagaaaataaactg---tttctctgagttctgtaaactgttctagcaaattattaaacccaagaagagagttatgggaacccctgatttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccactggcatctcaagtgaggacagtctcgtgggactgagcccctaatttgtggagtctgtgctaagtccaggtagtatcagaataaaatcatgggatacccagttaatatccagagcactggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacaCGGGCTTTTCTGTCACCTGTCTACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacatttgactcagtcttaatatccaggtgagcttgagcaaatcactcattattcctacgtctt-gatcacttcattcataaaatggggataactgtggcacctacctgtgattctgtgagaattactgaaatactatgcttgGTGTTATTGTGATCATTATACCTATTCCAAACTATCTGACAAGGACTGTGATGGATGATAACATGAAAAAATTAGAAACTGTAGTCAGGTCTCTCAGGCAAAATTCCATACAAGCAGAC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 35498 708 - 317753 gcacaccagcctgggcaacaaaata--acagcctctcttggaaaaaaaaaaaagaaaataaactttttctgaGTTCTGTAAACTATTCTAGCAAATTATTAAACCCAAGAAGAGAGTTATGGGAACACCTGATTTGTAACAGGTTGGTCAAAAGTACAGGTGACAACCTAGGACTTGccactggcatctgaagtgaggaTGGTCTCGTGGGACTGAGCCCCTAACTTGTGGGGTCTGTGCTAACTCCAGGTAGTGTCAGAATAAAATCGTGGCATACCCAGTTAATATCCAGAGCATTGGTGAATTTGGTGTAGAAACTCCATACATACATTCAGTCGGAAGTGTGTGAGTAGAGACAAACACGGGCTTTTCTTTCACCTGTCTACCTGCTTAACTGCATAGAAGAGGCAATACGTGGTGCTC-------AAGCAAGCATTAAAGTCAGACCAGACCCAACATTTGACTCAGTCTTAATATCCAGGTGAGCTTGGGCAAATCACTCATTATTTCTAACTCTT-CATCacttcattcataaaatggggataactgTGGCACCTACCTGTGATTCTGTGAGAATTAACGAAATATTATGCTTGGTGTTGTTGTGATCATTATACT--ATCCAAACTATCTGACAAGGACTGTGATGGATGAtaacatcaaaaaattagaaactgtAGTCAGGTCTCCCAGGCAAAATTCCATCCAAGCAAAT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124148612 715 - 127223203 gcacaccagcctgggcaacaaaataagaccgtttctctcagaaaaaaagaaaataaactg---tttctctgagttctggaaactgttctagcaaattattaaacccaagaagagagttatgggaacccctgatttgtaacaggttggtcaaaagtacaggtgacaacctaggacttgccactggcatctgaagtgaggacagtctcgtgggactgagcccctaacttgtggagtctgtgctaagtccaggtagtatcagaataaaatcatgggatacccagttaatatccagagcattggagaatttggtgtagaaactccatacatacattcagtcggaagtgtgtgagtagagacaaacaCGGGCTTTTCTGTCACCTGTATACCTGCTTAACTGCATAGgagaggcaatatgtggtgctcatgaacaaagcaagcattaaagtcagaccagacccaacacttgactcag-cttaatatccaggtgagcttgagcaaatcactcattattcctatgtcgt-cttcacttcattcataaaatggggataactgtggcacctacctgtgattctgtgagaattactgaaataCTATGTTTGGTGTTACTGTGATCATTATACCTATTCCAAACTATCTGACAAGGACTGTGATGGATGATAACATCAAAAAATTAGAAACTGTAGTCAGGTCTCTCAGGCAAAATTCCATACAAGCAGAC i chlSab2.chr21 I 6706 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e rheMac3.chr3 59775631 1572 + 198365852 T a score=937701.000000 s hg38.chr17_GL383563v3_alt 15492 567 + 375691 TACTGTGTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAACAGAATATGCCATCTTCGTTGTT---CAGGTCTGTACAGTGCTGGTGTCCCTTCCCGGGCAGTTTGCGCTATCCCATCCCGGCCCATTCCCCAtccctccacctcccc-cttccctccccactctcatacaactcttcctcatctttcaggacttggcttcaa-tgtcaccttaactggaagcttctctcactctccagAAGAGCTTCCCATTGCACCTGATGCATGGGAAACATAATTTGATCACTTTTAAGTTACAGTCCAAATCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCACAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACA-TCTTTTGACATAAAGGGATGACACAGACAGACATAAGTTCTTAAATGTCTTAAATGTCA----TGTGAAAATTAAACAGAATTCAAAGACTTGTGGGGAGCACTTAGGA-----AGTTACTGGGAATGTCAT-AAAGGGTTAAtttgtattttattttatttt----------ttgagaca s panTro4.chr4 121837330 583 + 193495092 TACTGTGTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAACAAAATATGCCATCTTCGTTGTTGTTCAGGTCTGTACAGTGCTGGTTTCCCTTCCCGGGCAGTTTGCGCTATCCCATCCCAGCCCATTCCCCAtccctccacctaccc-ctttcctccccactctcatacaactcttcctcatctttcaggacttggcttcaa-tgtcaccttaactggaagcttctctcactctccagAAGAGCTTCCCATTGCACTTGATGCATGC--ACTATTATTTGATCATTTTTAAGTTACAGTCCAAATCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACA-TCTTTTGACATAAAGGGATGACACAGACAGACATAAGTTCTTAAATGTCTTAAATGTTA----TGTGAAAATTAAACAGAATTCAAAGACTTGTGGGGAACACTTAGGAGGGAAAGTTACTGGGAATGTCAT-AAAGGGTTAatttgtattttattttattttattttattttttgagaca i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46794079 561 - 99891981 TACGGTCTCTCCAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAACAAAATGTGCCATCTTCATTGTT---CGGGTCTGTACAGTGAT-GTTTCCCTGCCTGGGCAGCTCACTccatcccatcccagcccattgcccatccctccacctcccc-cttccctccccACTCTCATACAACTCTTCCTCATCTTTCAGGACTTGGCTTCAA-TGTCATCTTAACTGGAAACTTCTCTCAGCCTCCAAAAGAGCTTCCCATTGCACTTGAAGCATGC--ACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTACCCAGTCGGTCTCCTTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAATACAT--TCTTTTGAAATAAAGGGATGACACAGACAGACCTAAGTTCTTAAACGTCTTAAATGGTA----TGTGAAAATTAAACAAAATTCAAAGACTTGT-GGGAACACTTAGAA-GGAAAGTTACTGGGAATGTCAT-AAAGGGTTAATTTGTGttttatttt---------------ttgagaca i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59774059 563 + 198365852 TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAACAAAATGTGCCGTCTTCATTGTC---CAGGTCTTTACAGTGTTGGTTTCCCTGCCTGGGCAGCTCCCTCCATCCCATCCCAGCCCATTCCCCAtccctccacctcccc-cttccctctccactctcatacaactcttcctcatctttcaggacccggcttcaa-tgtcaccttaattggaagcttctgtcaccctccagAAGAGCTTCCCATTGCACTTGATGCATGC--ACTGTTATTTGATCATTTCTGAGTCATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCTGAAGTCTTTCATGGTAGATCCAGCTAGAAGTGACAAAAAGACATTCTTTTGAAAAAGAGGGATGACACAGACAGACATAAGTTCTTAAATGTTTTAAATGGTA----CGTGAAATTTTAACAAAATTCAAAGGCTTGTGGGGAACACTTAGGAGGAAAAGTTACTAGGAATGTTAT-AAAGGGTTAATTTATATTTGATTGTACttt------------------ i rheMac3.chr3 T 1572 C 0 s macFas5.chr3 127692519 576 - 192294377 TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCATCATTCCCTGAACAAAATGTGACATCTTCATTGTC---CAGGTCTGTACAGTGCTGGTCTTCCTGCCTGAGCAGCTCACTTCATCCCATCCCAGCCCATTCTTCAtccctccacctcccc-cttccctccccactctcatacaactcttcctcatctttcaggacttggcttcaagggtcaccttaattggaagcttctctcactgtccagAAGAGCTTCCCACTGCACTTGATGCATGC--ACTATTATTTGATCATTTTTGAGTTACAGTGCAAGTATTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACATTCTTTTGAAATAAAGGGATGACACAGATAGACGGAAGTT-TTAAACGTCTTAAATGGTATGCGTGTGAAAATTAAACAAAATTCAAAGACTTGTGGGGAACATTTAGGAGGGAAAGTTACTGGGAATGTCATAAAAGGGttaatttgtattttattttatttt----------ttgagaca i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 36206 572 - 317753 TACTGTCTCTACAAAGCATTCCTGCTACACTTAATTCACCATTCCCTGAACAAAAGTGCCCATCTTCATTGTT---CAGGTCTGTACAGTGCTGGTTTCCCTGCCTGAACAGCTCACTCCATCCAATTCCAGCCCATTCTTCATCCCTCCACCTCCGC-TTTCCCTCCCCACTCTCATACAACTCTTCCTCATCTTTCAGGACTTGGCTTCAAGGGTCACCTTAACTGGAAGCTTCTCTCACTGTCCAAAAGAACTTCCCACTGCACTTGATGCATGC--ACTATCATTTGATCATTTTTGAGTTATAGTCCAAGTCTCTTTGTACCTGAATAACATGTTGCCCGGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACAATCTTTTGAAATAAAGGGATGACACAGACAGACGTAAGTTCTTAAACGTCTTAAATggta----tgtgaaaattaaacaaaattcaaaGACTTGTGGGGAACACTTAGGAGGGAAAGTTACTGGGAATGTCAT-AAAgggttaatttgtattttattttatttt----------ttgagaca i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124149327 577 - 127223203 TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAAAAAAAGTGACATCTTCATTGTC---CAGGTCTGTACAGTGCTGGTTTTCCTGACTGAGCAGCTCACTTcatcccatcccagcccattcttcatccctccacctcccCACTTCCCTCCCCACTCTCATACAACTCTTCCTCATCTTTCAGGACTTGGCTTCAAGGGTCACCTTAATTGGAAGCTTCTCTCACTGTCCAAAAGAGCTTCCCACTGCACTTGATGCATGC--ACTATTATTTGATCATTTCTGAGTTACAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACATTCTTTTGAAATAAAGGGATGACACAGATAGACGGAAGTTCTTAAACGTCTTAAATGGTATGTGTGTGAAAATTAAACAAAATTCAAAGACTTGTGGGGAACACTTAGGAGGGAAAGTTACTGGGAATGTCAT-AAAGGGTTAATTTGTATTTTATTTTACTTT----------TTGAGACA i chlSab2.chr21 C 0 I 25 e calJac3.chr2 1425200 23395 + 204313951 I a score=1085.000000 s hg38.chr17_GL383563v3_alt 16059 8 + 375691 gtct--------------------------catt s panTro4.chr4 121837913 8 + 193495092 gtct--------------------------catt i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46794640 25 - 99891981 ttctttttatttgatttttta---------tttt i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59774622 31 + 198365852 ---attttattttattttttgagacagtctcatt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127693095 25 - 192294377 ttatttttattttattttTTA---------TTTt i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 36778 25 - 317753 ttatttttattttatttttta---------tttt i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e chlSab2.chr21 124149904 25 - 127223203 I a score=159914.000000 s hg38.chr17_GL383563v3_alt 16067 92 + 375691 ctgtcacctaggctggagtgcagtggtgcaatca-ggctcactgcagccttgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGT s panTro4.chr4 121837921 90 + 193495092 ctgtcacctaggctggagtc--gtggtgcaatca-ggctcactgcagccttgaccacctgggctcaagtaatcTCACTTAATTTTTATTTTGT i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46794665 93 - 99891981 ctgtcacctaggctggagtgcagtggtgcaatcagggctcactgcagcctcgaccccctgggctcaagtaatcTCACTTAATTTTTATTTGGT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59774653 93 + 198365852 ctgtcacctaggctggagtgcagtggtacaatcagggctcactgcagtctcaaactcctggtctcaagtaatcTCACTTAATCTTTATTTGGT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127693120 93 - 192294377 ctgtcacctaggctggagtgcagtggtgcaattagggctcgctgcagcctcgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 36803 93 - 317753 ctgtcacctaggctggagagcagtggtgcaaccagggctcgctgcagcctcgaccacctgggctcaagtaatctcacttaatttttatttggt i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124149929 93 - 127223203 ctgtcacctaggctggagtgcagtggtgcaattagggcttgctgcagcctcgaccacctgggctcaagtaatcTCACTTAATTTTTATTTGGT i chlSab2.chr21 I 25 C 0 e calJac3.chr2 1425200 23395 + 204313951 I a score=1605942.000000 s hg38.chr17_GL383563v3_alt 16159 705 + 375691 TTAAGAAA----GTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgagagaggtatattacttgaggccaggagtttgaaatcagactgggcaatatattaagaccctgcctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggaat-gagggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttctattattactacatagtaatatataatgaaatgattctacaactcactataacgtagactcagtgggatctctgagcttgttttcctgcaactagactgtccacctggggtgatgggagacag--taacagaatatcaggcattagattctcataaggagtacacaacctagatccctcgcatgcacacttcacaacagagtttgtgctcctatgacaatctaatgctgctgctgatctgacaggacatggagctcaggtggtcatgcaagtgatgggaggggctagaaatacagatgaagtttcccttcactcgcctgctgctcacctccagctctgtggccctgtGGTTGGAGACCGCTGCTCAAGTGCATTTGAAAGGAACCATCCCACGCCATTCTTCAGAGTCATCTTTACTGCTGCAGTGGTCAACTTGTAGCACCCCTAAGCTCGCAGGACATATGCTTCAA s panTro4.chr4 121838011 705 + 193495092 TTAAGAAA----GTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgagagaggtatattacttgaggccaggagtttgagatcagcctgggcaatatattaagaccctgcctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagt-gagggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttctattattactacatagtaatatataatgaaatgattctacaactcactataacgtagactcagtgggatctctgagcttgttttcctgcaactagactgtccatctggggtgatgggagacag--taacagaatatcaggcattagattctcataaggagtacacaacctagatccctcgcatgcacacttcacaacagagtttgtgctcctatgagaatctaatgctgctgctgatctgacaggacatggagctcaggtggtcatgcaagcgatgggaggggctagaaatacagatgaagtttcccttcactcgcctgctgctcacctccagctctgtggccctgtGGTTGGAGACCGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCTGCAGTGGTCAACTTGTAGCACCCCTAAGCTCGCAGGACATATGCTTCAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8228650 701 - 23176937 TTAAGAAA----GTC-TGGTTGAGGGT-gtgggttatccctgt-atttcagcac-ttgggaggctgagagaggt-tattacttgaggccaggagtttgagatcagcctgggcaatatattaagaccctgcctctaccaaaaaaacaGAGTGAACGTgtggaagacaatttttccacagactgggagt-gagggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttctattattactacatagtaatatataatgaaatgattctacaactcactataacgtagactcagtgggatctctgagcttgttttcctgcaactagactgtccatctggggtgatgggagacag--taacagaatatcaggcattagattctcataaggcatacacaacctagatccctcgcatgcacacttcacaacagagtttgtgctcctatgagaatctaatgctgctgctgatctgacaggacatggagctcaggtggtcatgcaagcgatgggaggggctagaaatacagatgaagtttcccttcactcacctgctgctcacctccagctctgtggccctgtGGTTGGAGACCGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCTGCAGTGGTCAACCTGTAGCACCCCTAAGCTCACAGGACATATGCTTCAA i ponAbe2.chr4_random N 0 C 0 s nomLeu3.chr17 46794758 705 - 99891981 TTAAGAAA--CGGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggctgagagaggtatgttacatgaggccaggagtttgagatcagtctgggcaatatattaagaccttgtctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaagtgcattacatatattgtgcactttatttccattattattacatcgtaatatataatgaaataattctataactcactataatgtagaatcagtgggatctctgagcttgttttcctgcaactagactgtccatctggggtgatgggagacag--tgacagaacatcaggcattagattatcataaggagcgcacaacctagatccctagcgtgcacacttcacaacagggttcgtgctcctgtgagaatctaatgctgctgctgatctgacaggacatggagctcaagtggtcatgcaagtgatgggaggggctagaaatactgatgaagtttcccttcacttgcctgctgctcacctccggctctgtggccctgtGGTTGGAGACTGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTC--AGTCATCTTTACTGCTGCAGTGGTCAACTC-TAGCACCCCTAAGCTTGCAGGGCATATGCTTCAA i nomLeu3.chr17 C 0 I 291 s rheMac3.chr3 59774746 707 + 198365852 TTAAGAAACTCAGTCTTggttgagcatgctggcttatgcctataatctcagcattttgggaggctgagaggggtatattacttgagtcaagcagtttgagatcagcctgggcaacatattaagaccctgtctctaccaaaaaaacagaGTGAAtttatggaagacaatttttccacagactgggggtggagggaattatttcaggatgattcaagtgtattacatatattgtgcactttatttctattat---tacattgtaatatataatgaaataattatacaactcactataacatagaatcagtggcatctctgagcttgttttcctgcatcaagactgttcatgtgtggtgacgggagacag--tgacagatcatcagccattagattctcataaagagtgtgcaacctagatccctcacatgcaaagtgcacaacagggttcgtgcttctatgagaatctaatgctcctactgatctgacaggacatggagctcaggtggtcatgtgagtgatgggaggggctataaatacagatgaagtttcccctcactcacttgctgctcacctctggctctgtagccctgtGGTTGGAGACCCCTGCTTGAGTGCATTCAAAGGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCCATCATGGTCAAATG-TAGCACCCCTAAGCTCACACGGCATATGCCTCAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127693213 706 - 192294377 TTAAGGAA-TAAGTCTTggttgagggtggtggcttacgcctgtaatctcagcactttgggaggccgaga--ggtatattacttgaggccaggaatttgagatcagcctgagcaatatattaagaccctgtctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaaatgcattacatatactgtgcactttatttctattattactacattgtaagatataatgaaataattctacaacttactataatgtagactcagtgggatctctgagcttgttttcctgcaacgacactgtccatctagggtgatgggagatag--tgatagaacatcaggcattggattctcataaggagtgcacaacctagatccctcgcatgcacgcttcacaacagggttcgtgcttctatgagaatcgaatgctgctgctcatctgacaggacatggagctcaggtggtcatacaagcgataggaggggctagaaatacagatgaagtttcccctcactcgcctgctgctcacctccggttctatggcccTTTGGTTGGAGACCGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGTGGCAGTGGTCAACTG-TAGCACCCCTAAGCTCGCAGGGCATACGCTTCAC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 36896 705 - 317753 ttaagAAA--CAGTCTTGGTTGagggtggtggcttatgcctgtaatctcagcactttgggaggctgaga--ggtatattacttgaggccaggactttgagatcagcctgggcaatatattaagaccctgtctctacc-aaaaaacagaGTGAAtgtgtggaagacaatttttccacagactgggagTGGAGGGAATaatttcaggatgattcaagcgcaTTACATATATTGTGCACTTTATATCTATTATtactacattgtaatatataatgaaataattctacaactcacTATAATGTAGACTCAGTGGGatctctgagcttgttttcctgcaacgaCACTGTCCATCtagggtgatgggagacag--tgatagaacatcaggcattagattctcataaggagtgcacaacctagatccctcgcatgcacactTCACAACAGGGTTCGTGCTTCTATGAGAACCAAATGCTGCTGCTCATCTGACAGGACATGGAGCTCAGGTGGTCATACAAGCGATAGGAGGGGCtagaaatacagatgaagtttcCCCTCActcgcctgctgctcacctctgGTTCTATGGCCCTGTGGTTGGAGACTGCTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCGGCAGTGGTCAACTG-TAGCACCCCTAAGCTCGCAGGGCATATGCTTCAC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124150022 708 - 127223203 TTAAGAAA-TAAGTCTTggttgagggtggtggcttatgcctgtaatctcagcactttgggaggccgaga--ggtatattacttgaggccaggaatttgagatcagcctgagcaatatattaagaccctgtctctacc-aaaaaACAGAGTGAATGTgtggaagacaatttttccacagactgggagtggagggaataatttcaggatgattcaaatgcattacatatactgtgccctttatttctattattactacattgtaatatataatgaaataattctacaactcactataatgtagactcagtgggatctctgagcttagtttcctgcaacgacactgtccatctagggtgatgggagacagcctgatagaacatcaggcattagattctcataaggagtgcacaacctagattcctcacatgcacgcttcacaacagggttcgtgcttctatgagaatcgaatgctgctgctcatctgacaggacatggagctcaggtggtcatacaagcgataggaggggctagaaatacagatgaagtttcccctcacttgcctgctgctcacctccggttctatggccctgtGGTTGGAGACCACTGCTCAAGTGCATTCGAAAGGATCCATCCCATGCCATTCTTCAGAGTCATCTTTACTGCGGCAGTGGTCAACTG-TAGCACCCCTAAGCTTGCAGGGCAAATGCTTCAC i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I a score=3336291.000000 s hg38.chr17_GL383563v3_alt 16864 1611 + 375691 CTGGCATT---TCACAATCAACAGTATGTGGCAGCTTGAGTCATTGTGAGCTCACTTCCTGGAAATCACCAGCATCCCATATCCCATT-GCAAGGAGCTCAGCACTGCTCCTTGGATAACCAAACCTATTCCCAAATCCCATCTGTGTGCGTCTATCTCCTGGTACCCTTCCTAGCATCAATTCtgtatttgtaggagtccaatcaggagacacaaaccactcaaaagtttaaactagaatgagcaagatggctcacacctgtaaccccagaactctgggaggccaaggtgggtggactgctttgagctcaggagtttgagaac---------------agtctggg--------------------------aaacatggcgaaacctcgtctctacaaaaaacacaaaaatcagctgggtgtggtggcacttacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgggtgacagtgtgagacccggtatcaaaa---agaaa-aaaCGtatatatatatatatatatatatatatatatatatatatatatatatatgtaaatttaatataaaaagtatt-aattttggccaggcaaaatggctcatgcctgtaatcccagcactttgggaggccaaggcagacagatcacctgaggtcaggagttcgagaccagcctgaccagcacagagaaaccccatctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccaactactcgggaggctgaggcaggagaattgcttgaacccagaag------------------------------------------------------------gtggaggttgcgctgagccgagatagcaccattgcac--------------tccagcctggg-------------------------------------------caacaagagtgaaactccatctcaaaaaaaaaaaaaaaaggtattaatttttacagaggatcagcacaatgagggacacactagcacaaagtaaagacaactctagagaatacggaactagcagaggccaggcattgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcgcttgaggccaggagttggagaccaatcagtgctaaatagtgagactctgtgtctacc--aaaaaaa---agagacattagccaggtgtggtggtggtgcacactcgtagttccagctacttgggagtctggggtgggagaaatcccttgagcctgggaagtctacactacagtgagccaagattgtgccactgcactccagcctgggc-gacagagtgagaccctgtcttagaaaga-----aaaaagaaaagaaaGTGTTAATCCCCCTATGGGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCCCACTTTTAGCTCCTTCCCATCATCATTTAAATTACTCAAACTTCTTCTGTTTTAAAAACCTCTCCCTAAACTCAGGGAG-----------AGGTCTTCTGCACACACATTGAGCCATCTGCTCTTCCTGGTGCCTTCTCT--ACAGCAGCCTGAGCCATGTCTCTAATCTATGAATCTCATCATGTTAC---TCCCCCATTTACATCACTTCTCCTTGCCTCAGGGAT s panTro4.chr4 121838716 1566 + 193495092 CTGGCATT---TCACAATCAACAGTATGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATTCCATATCCCATTAGCAAGGAGCTCAGCACTGCTCCTTGGATAACCAAACCTATTCCCAAATCCCATCTGTGTACGTCTATCTCCTGGTACCCTTCCTAGCATCAATTCtgtatttgtaggagtccaatcaggagacacaaaccactcaaaagtttaaactagaatgagcaagatggctcacacctgtaatcccagcactttgggatgccaaggtggatggactgctttgagctcaggagtttgagaac---------------agtctggg--------------------------aaacatggcgagacctcgtctctacaaaaa-cataaaaatcagctgggtgtggtggcacttacctgtaatcccagctactcgggaggctgaggcaggagaactgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgggtgacagtgtgagacccggtatcaaaa---agaaa-aaacgtatatatat----------------------------------------gtaaatttaatataaaaagtatt-aattttggccaggcacaatggctcatgcctgtaatcccagcactttgggaggccaaggcagacagatcacctgaggtcaggagttcgagaccagcctgaccagcatggagaaaccccatctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccggcag------------------------------------------------------------gtggaggttgtgctgagccgagatagtgccactgcac--------------tccagcctggg-------------------------------------------caacaagagtgaaactccatctcgaaaaaaaaaaaa---ggtattaatttttacagaggatcagcacaatgagggacacactagcacaaagtaaagacaactctagagaatacg-aactaacagaggccaggcattgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcgcttgaggccaggagttggagaccaatcagtgctaaatagtgagactctgtgtctacc--aaaaaaa----gaaacattagccaggtgtggtggtggtgcacacccgtagttccagctacttgggagtctggggtgggagaaatcccttgagcctgggaagtctacactacagtgagccaagattgtgccactgcactccagcctgggc-aacagagtgagaccctgtcttagaaaga-----aaaaagaaaagaaaGTGTTAATCCCCCTATGGGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCCCACTTTTAGCTCCTTCCCATCATCATTTAAATTACTCAAACTTCTTCTGTTTTAAAAACCTCTCCCTAAACTCAGTGAG-----------AGGTCTCCTGCACACCCATTGAGCCATCTGCTCTCCCTGGTGCCTTCTCT--ACAGCAGCCTGAGCCATGTCTCTAATCCATGAATCTCATCATGTTAC---TCCCCCATTTACATCACTTCTCCTTGCCTCAGGGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8229351 1567 - 23176937 CTGGCATT---TCACAATCAACAGTATATGGTAGCTTGAGTCATTGTGAAGTCACTTCCTGGAAATCACCAGCATCCCATATCCCATTAGCAAGGAGCTCAGCACTGCTCCTTGGATAACCAAACCTACTCCCAAATCCCATCTGTGTGCGTCTATCTCCTGGTACCCTTCCTAGCATCGACTCtgtatttgtaggagtccaatcaggagacacaaaccattcaaaagtttaaactagaatgagcaaggtggctcacacctgtaatcccagcactttaggaggccaaggtgggtggactgctttgagctcaggagtttgagaac---------------agtccggg--------------------------aaacatggcgaaacctcgtctctacaaaaaacacaaaaatcagctgggtgtggtggcatttacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgggtgacagtgcgagacccggtatcaaaa---agaaa-aaatgtatatatat----------------------------------------gtaaatttaatataaaaagtatt-aattttggccaggcacaatggctcatgcctgtaatcccagcactttgggaggccaaggcagacagatcacctgaggtcaggagttcgagaccagcctgaccagcatggagcaaccccatctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccaactacttgggaggccgaggcaggagaatcgcttgaaccaggcag------------------------------------------------------------gtggaggttgcgctgagtcaagatagcgccattgcac--------------tccagcctggg-------------------------------------------caacaagagtgaaactccatcttgaagaaaagaaaa---ggtattaatttttacagaggatcagcacaatgagggacacactagcacaaagtaaagacaactctagagaatacagaactatcagaggccaggcattgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcacttgaggccaggagttggagaccaatcagcacaaaatagtgagactctgtgtctacc--aaaaaaa---agaaacattagccaggtgtggtggtggtgcacacccgtagttccagctacttgggagtctggggtgggag-aaccccttaagcct-ggaagtctgcactacaatgagccaagattgtgccactgcactccagcctgggt-gacagagtgagactctgtctcagaaaga-----aaaaagaaaagaaaGTGTTAATCCCCCTGTGAGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCCCACTTTTAGCTCCTTCCCATCATCATTTAAATTACTCAAACTTCTTCTGTTTAAAAAACCTCTCCCTAAACTCAGTGAG-----------AGGTCTCCTGCACACCCACTGAGCCATCTGCTCTCCCTGGTGCCTTCTCT--ACAGCAGCCTGAGCCATGTCTCTAATCCATGAATCTCATCATGTTAC---TCCCCCATTTACATCACTTCTCCTTGCCTCAGGGAT i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46795754 1596 - 99891981 CTGGTATTTCATCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCCATATCCCATTAGCAAGGAGCTCAGCACTGCTCCTTGGATGACCAAACCTATTCCCAAATCCCATCTGTGTGGGTCTATCTCCTAGTACCCTTCCTACCATCAATTCtgtatttgtaggagtccaatcaggagacacaaaccactcagaagtttaaacTAGAATGAGCAAggtggctcacacctataatcccagcacttcgggaggccaaggtgggtggattgctttgagctcaggagtttgagacc---------------agtctggg--------------------------aaacatggcgaaaccccatctctacaaaaaacacaaaaattagctcggtgtggcggcatttacctgtaatcccagctactcgggaggctaagtcaggagaattgcttgagcctggcaggtggaggctgcagtgagcagaggttgtgccactgtactccagcctgagtgacagcatgagacctggtatcaaaa---agaaatatatatatatatat----------atatatacacacacacacacacacatatatGTaaatttaatatagaaagcatt-aattttggccaggcacaatggctcatgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaggagttccagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccggcag------------------------------------------------------------gcggaggttgcggtgagccgagatagcgccactgcactccagcctgggcaatccagcctggg-------------------------------------------caacaagagtgaaactccatctcaaaaaaaaaaaa----ggtattaattttagcagaggatcagcataacgagggacacactagcacaaagtaaagacaactctagagaatacagaactagcagaggccaggcactgtggctcatgcctgtaatcccagcaatttgggaagcctaggcaggaggatcacttgaggccaggagttggagacctgtcagcgcaacatagtgagactatctgtctacc--aaaaaaaagaaaaaatattagccaggtgtggtggtggtgcacacctgtaattccagctacttgggagtctggggtg--------------------ggaagtctacactacagtgagccaagatcatgccactgcattccagcctgggc-gacagagtgagaccctgtcttagaaag------aaaaagaaaagaaaGTATTAATCCCCCTAAGGGAATCTCCTCTTCTCCTGCCCTCTCTGGAACCTCATTTGTCAGTTCTTTCTCCCACTTCCCTGTATCTTTAACCTATCCCCCACTTTCAGCACCTTCCCACCATCATTTAAATTACTCAAACTTCTTCTATTTTAAAAACCTCTCCCTAAACTCAGT--G-----------AGGTCTCCTGCACACCCACTGAGCCATCTGCTCCCCCTGGTGCCttctct--acagaagcctgagccacgtctctaatccatgaatctcatcatgttac---tcccccatttacatcacttctccttgcttcggggat i nomLeu3.chr17 I 291 C 0 s rheMac3.chr3 59775453 1593 + 198365852 GTGGCATTTCATCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCAGTTCCTGGAAATCACCAGCATCCCATGTCCCACTGGCAAGGAGCTCAGCACTGCTCCGTGGATAACCAAACCCATGCCCAAATCCCATCTGTGTGGGTCTATCTCCTGGTATCCTTCCTAGCATCAATTCtgtatttgtaggagtccaatcaggagacataaaccactcaaaagtttaaactagaatgggcacggtggctcaaacctgtaatcctagcactttgggaggccaaggtgggtggatcgctttgagcttaggagtttgagacc---------------aaactggg--------------------------aaacaggacgaaactctgtctctacaaaaaacacaaaaattaggcgggtgttgtggtacatacctgtaatcccagctacttgggaggctgaggcagaagaattgctttagcctggcaagtgaaggttgaagtgagcagagattgtgc-----cactccagcctgggcgacggagtaaaatccggtatcaaaaaataaaag-aaa-aaatatgtat----------------------------------------gtaaatttaatataaaaagtattaaattttggctgggcgcagtggctcacgcctataatcccacgactttgggaggccgaggcaggcagatcacctgaggtcaggagttagaga----cttgaccaacatggagaaaccccgtttctacgaaaaatacaaaattagctgggtgtggtggagcatgcctgtgattccagctacttgggaggc------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaaaaaaaaaaaaaa--------aaaaaaaaaaaaa---ggtattaattttaacagaggatcagcataatgagggacactctagcacaaagtaaacaca----aagtaaatatagaactagcagaggccaggcatagtggctcaagcctgtaatcccagcaatttgggaagcctaggcaagaggatcgcttgaggccaggagttggagaccagcctgtgcaacatagtgagaccctgtgtctacc--aaaaaaa--gaaaaaaattagccaggcgtggtcgtggtgcacacctgtagttccagctactt-ggagtctggggtgggag-gaccccttgagcctgggaagtctaggctacagtgagccaagatcatgccattgcact----cctgggc-aat--agtgagaccctgccttagaaagaaaaaaaaaaagaaaagaaaGTgctaatccccctacgggaatctcctcttctcctgccttctctggaacctcacttgtcagttcttcctcccacttccccgtatcattaacctatcccactcttttagctccttcccaccatcatttaaactaatcaaacttcttatattttaaaaaactttccctaaactcagtgtttcccctgcttcagGTCTCCAGTACACCCACTGAGCCATCTGCTTTCCCTGATGCCTTCTCTACACAGCAGCCTGGACCACATCTCTAATCCATGAATCTCATTATGTTACTCTTCCCCCATTTACATCACTCCTCCTTGCCTCCGGGAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127693919 1564 - 192294377 CTGGCATTTCACCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCCATTAGGAAGGAGTTCAGCACTGTTCCATGGATAACCAAACCTATTCCCAAATCCTATCTGTGTGGGTCTATCTCCTGGTACCCTTCCTAGCATCAATTCtgtatttgtaggagtccaatcaggagacacaaacaactcaaaagtttaaactggaatgagcaaggtggatcacacctgtaatctcagcactttggaaggccaaggtgggtggattgccttgagcttaggagtttgagacc---------------agtctggg--------------------------aaatatggtgaaatcccatctctacaaaaaacacaaaaattagctacgtg--gtgggacttacctgtaatcccagcaacgtgggaggctgaggcaggagaattgcttgagcttggcaggtggaggctgcgatgagcagaggttgtgccactgcactccagcctgggtgacagcgtgagacccggtatcaaaa---agaaa-aaa-atacatatat----------------------------------------gtcaatttaatat-aaaagtatt-gattttggccaggcgaaatggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacgcggagaaaccccgtctctaccaaaaatacaaaattagctgggcatggtggcacatggctgtcatcccagttactcaggaggctgaggcaggagaatcacttgaacccggcag------------------------------------------------------------gcggagattgcggtgagtcgagatagcgccattgcac--------------tccagcctggg-------------------------------------------caacaagagtgaaactccatct-caaaagaaaaaaa---ggtattaattttaacagaggatcagcataatgagggacacactagcacgaagtaaagacatctctagagaatacagaactagcagaggtcaggcattatggctcatgcctgtaatcccagcaatttcggaagcctagacagcaggatcgcttgaggccaggagttggagaccagtcagagcaacatagtgagacgctgtgtctacccaaaaaaaa--gaacaatattagccaggtgtggtggtggtgtacacctgtagttccagctacttgggagtctggggtgggag-gatcccttgagcctgggaagtctacactacagtgagccaagatcatgccactgaactccagcctaggt-gacagagtaagaccctgtcttag----------aaaaagaaaagaaaGTATTAATCCCCCTATGGGAatctcctcttctcctgccctctcaggaacctcacttgtcagttcttcctcccactttcctgtatctttaacctatcccccacttttagctccttcccaccatcatttaaattactcaaacttcttctattttaaaaaCCTCTTCCTAAACTCAGTGAG-----------AGGTCTCCTGCACACCCACTGAGCCATCTGCTCCTCCTGGTGCCTTCGCT--ATAGCAGCCTGAACCATGTCTCTAATCCATGAATCTCATCACGTTAC---TCCCCCATTTACATCACTTCTCCTTGCCTCCGGGAT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 37601 1547 - 317753 CGGGCATTTCACCACAATCAACAGTAAGTGGTAGCTTGAGTTATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCCATTAGGAAGGAGTTCAGCACTGTTCCTTGGATAACCAAACCTATTCCCAAATCCTATCTGTGTGGGTCTATCTCCTGGTACCCTTCCTAGAATCAATTCTGTATTTGTAGGAGTCTAATCAGGAGACACAATCAACTCAAAAGTTTAAACTAGAATGAGCaaggtggatcacacctgtaatctcagcaccttgggaggccaaggtgggtgggttg-tttgagctcaggagtttgagaac---------------agtctggg--------------------------aaacatggcgaaaccccatctctacaaaaaacacaaaaattaactcagtgtGGTGGCActtacctataatcccagctacatgggaggctgaggcaagagaattgcttgagcttggcaggtggaggctgcagtgagcagaggttgtgccactgcactccagcctgggtgacagcgtgagacccagtatcaaaa---agaaa-aaa-ataaatatat----------------------------------------gtaaatttaatataaaaagtatt-aattttggccaggcgcaatggctcatgcctataatcccagcactttgggaggccaagacaggcggatcacctgaggtcaggagttcgagaccaacctgaccaacatggagaaaccccgtctctactaaaaatacaaaattagctgggcatggtggcacatgcctataatcccagctactcgggaggctgaggcaggagaatcgcttgaatctggcag------------------------------------------------------------gcagaggttgcggtgagctgagacagcgccactgcac--------------tccagcatggg-------------------------------------------caacaagagtgaaactccatctcaaaaaaaaaaaaa---ggtattaactTCCACAGAGGACCAGCATAATGAGGGACACACTAGCataaaataaagacaactttAGAGAATACAGAACTAGtagaggttgggcatggtggatcacgcctttaatcccagcaatttgggaagcctaggcaggaggatcgctggaggccaggagttggagaccagtcagcgcaacatagtgagacactgtgtctact--gaaaaaa--gaaaaatattagccaggtgtggtggtggtgcatacctgtagttctagctacttgggagtctgcggtgggag-gatcccttgagcctgggaagtctacactacagtgagccaagatcatgccactgcactccagcctgggtggacagagtgagaccctgtctcag----------aaaaagaaaagaaagtgttaatTCCCCTGTGGGAATCTCCTCTTCTCCTGCCCTCTCAAGAACCTCACTTGTCAGTTCTTCCTCCCACTTTCCTGTATCTTTAACCTATCCCC-------------------CCATCATTTAAATTTCTCAAacttcttctattttaaaaacctcTGCCTAAACTCAGTAAG-----------AGGTCTCCTGCACACCCACTGAGCCATCTGTTCCCCCTGGTGCCTTCTCT--ACAGCAGCCTGAGCCATGTCTCTAATCCATGAATCTCATCACGTTAC---TCCCCCATTTACATCACTTGTCCTTGCCTTGGAGAT i papAnu2.JH684865 C 0 I 201 s chlSab2.chr21 124150730 1606 - 127223203 CTGGCCTTTCACCACAATCAACAGTAAGTGGTAGCTTGAGTCATTGTGAGGTCACTTCCTGGAAATCACCAGCATCCTATATCCAATTAGGAAGCAGTTCAGCACTGCTCCTTGGATAACCAAGCCTATTCCCAAATCCTATCCATGTGGGTCTATCTCCTGGTACCCTTCCTAGCATCAATTCtgtatttgtaggagtccaatcaggagactcaaacaactcaaaagtttaaactggaatgagcaaggtggatcacacctgtaatctcagcactttctgaggccaaggtgggtggattgccttgagctcaggagtttgagacctgagaaatatggcgaaatctgggaaatatggcgaaatcccatctctacaaaatatggcgaaatcccatctctacaaaaaacacaaaaattagctatgtg--gtggcacttacctgtaatcccagcaacgtgggaggctgaggcaggagaattgcttgagcttggcaggtggaggctgcgatgagcagaggttgtgccactgcactccagcctgggtgacagcgtgagacccggtatcaaaa---agaaa-aaa-atacatatat----------------------------------------gtaaatttaatataaaaagtatt-aattttggccaggtgaaatggctcatgcctataatcccagcactttgggaggccaagacaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacgtggagaaaccccctctctaccaaaagtacaaaattagctgggcatggtggcacatggctgtcatcccagttactcaggaggctgaggcaggagaatcacttgaacccggcag------------------------------------------------------------gcggaggttgcggtgagtcgagatagcgccattgcac--------------tccagcttggg-------------------------------------------caacaagagtgaaactccatct-caaaagaaaaaaa---ggtattaattttaacagaggatcagcataatgagggacacactagcacaaagtaaagacatctctagagaatacagaactagcagaggtcaggcattatggctcatgcctgtaatcccaacaattttggaagcctaggcagcaggatcgcttgaggccaggagttggagaccagtcagagcaacatagtgagacgctgtgtctaccaaaaaaaaa--gaacaatattagccaggtgtggtggtggtgcacacctgtagttccagctacttgggagtctggggtaggag-gatcccttgagcctaggaagtctacactacagtgagccaagatcatgccactgaactccagcctaggt-gacagagtaagaccctgtcttag----------aaaaagaaaagaaaGTGTTAATCCCCCTATGGGAatctcctctcctcctgccctctcaggaaactcacttgtcagttcttcctcccactttcctgtatctttaacctatcccccacttttagctccttcccaccatcatttaaattactcaaacttctgctattttaaaaaCCTCTTCCTAAACTCAGTGAG-----------AGGTCTCCTGCACACCCACTGAGCCATCTGCTCCCCCTGGTGCCTTCGCT--ATAGCAGCCTGAGCCATGTCTCTAATCCATGAATCTCATCACGTTAC---TCCCCCATTTACATCACTTCTCCTTGCCTCTGGGAT i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I a score=2616810.000000 s hg38.chr17_GL383563v3_alt 18475 1155 + 375691 TAAGTCCAAACTCCTTAACAgcccctgctctgccctgccttgcaaggcagcctcactg--cttgcccctctccatttcatctgctatggagtccaactgagcctcatctgccccttgaacgcacactctttctcctctgggagtctctgaagtgggtaatatcctctgcttataatatgcttccccttaaacctctactctcttcctagctagctttgactcctctgtcacttgtccgctttggcatcacctcctcatagaagacttctatgactcccgagATTCTCAGGAGCATGGCAGGTGAAGTGctcctcccatgaatggatggagattagggagtgtgtgttattcatgcttcattcaccagtgcttagctgagtacctggcataaaatagttactGTGGTGGCCAAAGTAATAAC------CCCCACCGCC---ACCAATTGCTCATGTCCTATGTTACACAGCACAAttacataggaagggggaattaagagtgcagataaaattaatgctgctcatcagctgtccttaaaacaagattatcctggagtatctaggagagcccatgtaattacaagcattctttaaaactggaagagggaggcagaaggttaagaaccagagacggTgggcacaatggctcatgcctgtaataccaatactttgggaggccagggtaggaaaatcccttgagtgcaggagttcaaggtcagccatggcaacata-ctgaggtcccatctctacaacaaaataaaaacaaaattcactgagtgtcacgatgcttacctgtagtcccagctactgggaaggctgacatggtaggattgcttgagcctgggagtttgaggctataatgagccatgataggaccactgaactccatcct-agtgacagggcaaggtcctgtttctgaagaaaaaaaGGACATTGGAATCAGGGCCCTCTCCATCCTGAGGTGCCTACAAGGCATCTCTCTCTGCAAACGAGTAAACATCACCCTCCAACTCCTTACAGAGTGGAGCAACAGGAAAACTCCCTCACCTCATTTCTGTGCTGCTTGGGAGGCCTGGACAGCCCAATAACCAGCTCCTCGCTGATGAAGCAATCAGGAAATGGCTCGAGTTGAGCTAAGGAGAATTTGGATCCTTCCTTTGGTTCTCA s panTro4.chr4 121840282 1156 + 193495092 TAAGTCCAAACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAgcctcactg--cttgcccctctccatttcatctgctatggagtccaactgagcctcatctgccccttcaacgcacactctttctcctctgggagtctctgaagtgggtaatatcctctgcttataatatgcttccccttaaacctctactctcttcctagctagcttcgactcctctgtcacttgtccgctttggcatcacctcctcatagaagacttctttgactcccgagATTCTCAGGAGCATGGCAGGTGAGGTGctcctcccatgaatggatggagattagggagtgtgtgttattcatgcttaattcaccagtgcttagctgagtacctggcataaaatagTTACTGTGGTGGCCAAAGTAATAAC------CCCCACCGCC---ACCAATTGCTCATGTCCTATGTTACACAGCACAAttacataggaagggggaattaagagtgcagataaaattaatgttgctcatcagctgaccttaaaacaagattatcctggagtatctaggagagcccatgtaattacaagcattctttaaaactggaagagggaggcagaaggttaagaaccagagacggTgggcacaatggcttatgcctgtaataccaatactttgggaggccagggcaggaaaatcccttgagtgcaggagttcaaggtcagccgtggcaacata-ctgaggtcccatctttacaacaaaataaaaacaaaattcactgagtgtcacgatgcttacctgtagtcccagctactgggaaggctgacatggtaggattgcttgagcctgggagtttgaggctataatgagccatgataggaccactgaactccatcctgagtgacagggcaaggtcctgtttctaaagaaaaaaaGGACATTGGAATCAGGGTCCTCTCCATCCTGAGGTGCCTACAAGGCATCTCTCTCTGCAAACGAGTAAACATCACCCTCCAACTCCTTACAGAGTGGAGCAGCAGGAAAACTCCTTCACCTCATTTCTGTGCTGCTTGGGAGGCCTGGACAGCCCAATAACCAGCTCCTTGCTGATGAAGCAATCAGGAAATGGCTCGAGTTGAGCTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8230918 1156 - 23176937 TAAGTCCAAACTCCTTAACAgcccctgctctgccctgccttgcaaggcagcctcactg--cttgcccctctccatttcatctgctatggagtccaactgagcctcatctgccccttcaatgcaaactctttctcctctgggagtctctgaagtgggtgatatcctctgcttataatatgtttccccttaaacctctactctcttcctagctagctttgactcctctgtcacttgtccgctttggcatcacctcctcatggaagacttctttgactccccagattctcaggagcATGACAGGTGAGGTGctcctcccaagaatggatggagattagggagtgtgtgttattcatgcttaattcaccagtgcttagctgagtacctggcataaaatagttactGTGGTGGCCAAAGTAATAAC------CCCCACCCCC---ACCAATTGCTCATGTCCTATGTTACACAGCACAAttacatagaaaggtggaattaagagtgcagataaaattaatgttgctcgtcagctgaccttaaaacaagattatcctggagtatctaggagagcccatgtaattacacgcattctttaaaactggaagagggaggcagaaggttaagaaccagagacggTgggcacaatggctcatgcctgtaataccaatactttgggaggccaggtcaggaaaatcccttgagtgtaggagttcaaggtcagccgtggcaacata-ctgaggccccatctctacaaaaaaataaaaacgaaattcactgagtgtcacgatgcttgcctgtagtcccagctactgggaaggctgacatggtaggactgcttgagcctgggagtttgaggctacaatgagccatgattggaccactgaactccatcctgagtgacagggcaaggtcctgttttgaaagaaaaaaaGGACATTGGAATCAGGGTCCTCTCCATCCTGAGGTGCCTACAAGGCATCTCTCTCTGCAAACGAGTAAACATCACCCTCCAACTCCTTACAGAGTGGAGCAGCAGGAAAACTCCTTCACCTCATTTCTGTGCTGCTTGGGAGGCCTGGACAGCCCAATAACAAGCTCCTTGCTGATGAAGCAATCAGGAAATGGCTCGAGTTGAGCTAAGGAGAATTTGGATCCTTCTTTTAGTTCTCA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46797350 1146 - 99891981 taagtccaaactccttaacagcccctgctctgccctgccgtgcaaggcagcctcactg--cttgcccctctccatttcacctgctatggagtccaactgagcctcatctgccccctgaatgcacactc--tctcctctgggagtctctgaagtgggtgatatcctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcggctcctctgtcacttgtccgctttggcatcacctcctcatggaagacttccttgactccccaGATTCTCAGGAGCATGGCAGGTGAGGTGcttctcccatgaatggatgaagattagggagtgtgtgttattcatgcttaattcaccagtgcttagctcagtacctggcacaaaacagttactGTGGTGGCCAAAGTAATAAC------CCCCCCCTCCCCAACTAATTGCTCATGTCCTATGTTACACAGCACAAttatataggaagggggaattaagagtgcagataaaattaacgttgctcatcagctgaccttaaaacaagatcatcctggagtatctaggagagcccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagaCAGTgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatcccttgagtgcagcagttcaagttcag-cgtggcaacata-gtgcggccccaactctacaaaaaaataaaaacaaaattcactgagtgtcatggtgctta---------ccagctattgggaaggctgacgtggtaggattgcttgagcctgggagtttgaggctacaatgagccatgattggaccactgaactccatcctgagtgacagggcaaggtcctgtttctaaagaaaaaaaGGACATTGGAATTAGGGTCCCCTCCATCGTAAGGTAGCTACAAGGCATCTCTCTCTGCAAATGAGTAAACATCATCCTCCAACTCCTCACAGAGTGGAGCAGCAGGAAAACTCCCTCACCTCATTTCTGTGCTGCGTGGGAGGCCTGGACAGCCCAATAACCAGCACCTTGCTGATGAAGCAATTATGAAATGGCTTGAGTTGAGCTAA-GAGAATTTGGATCCTTCCTTTGGTTCTCA i nomLeu3.chr17 C 0 M 271 s rheMac3.chr3 59777046 1144 + 198365852 TAAGTCCAGACTCCTTAACAGCCCCTGCtctgccctgcattccaaggcagactcactgctcttgcccctctccattttacctgctgtggagtccaactgagccacatctgccccctgaatgcccactctcactcctctgggaggctctgaagtgggtgatgccctctgcttataatacgcttccccttaaacctctactctcttcctgggtagcttcggctcctctgtcacttctctgctttggcatcatctcctcctggaagccttccttgactccccagATTCTCAGGAGTATGGGAGGTGAGGTGctcctcccatatatgaatggagattagggagtatgtgttattcatgtttaattcaccagtgcttagctcagtacctggcacaaaatagtcactGTGGTGGCCAAGGTAACGACAGCCCTCCCACCCCCC---AGCAATAGCTCATGTCCTATGTTACACTGCACAAAtacataggaa-ggggaattaagagtgcagatggaattaatgttgctaatcagctgaccttaaaacaagattatctggcagtatctgggtgagcccatgtaattacaagtgttccttaaatgtggaaaagggaggcagaaggttaagaaccagagaTAGTgggcacaatggctcatgcctgtcttaccaatactttccgaggccaagacagcaaaatcccttgagtccaggagttcaaggccagccctgacaacata-gtgaggcctcatctctacaaaaaaccccaaa------------------atggtgcttacctgtagtcccagctactgggaaggatgaagtgggagggtcacttgagactgggagtttgaggctacaatgagccatgataggacaactgaactccatcctgagtgacagagcaaggtcctgcttctaaagaaaaaaaGGACATTGGAATTAGGGTCCCCTCCATCCTAAGGTGCCTACAAGGCATCTCTCTCTGCAAACGAGTAAACATCATCCTCCAACTCCTCACAGAGCGGAGCAGCAGGAAAACTCCCTCACCTCATTTCTGTGTGGCTTGGGAGGCCT-GACAGCCCAATAACCAGCTCCTTGCTGATGAAGCAATTGGGAAATGGCTCGAGTTGAGTTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127695483 1129 - 192294377 TAAGTCCAGACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAGCCTCACTG--CTTGCCCCTCTCCATTTCACCTACTATGGAGTCCAGCTGAGCCTCAtcttt--------------------ctcctctgggactctctgaagtgggtgatgccctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcagctcctctgtcacttgtccgctttggcatcacctcctcacggaagacttccttgactccccaGATTCTCAGGAGCATGGCAGGTGAGGTGCTCCTCCCATGAATGGATGGAGATTAGGGAGAGTGTGTTATTCATGCTTAATTCACCAGTGCTTAGCTCAGTACCTAGCACAAAACAGTTACTGTGGTAGCCAAAGTAATAAC------CCCCACCCCC---ACCAATTGTTCATGTCCTATGTTACACAGCACAAttgcataggaagggggaattaagagtacagataaaattaatgttgaaaatcagctgaccttaaaacaagattatcctggaatatctagaagagtccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagatagtgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatcccttgagtgcaggagttcaaggtcagctctggcaacacacttgaggccccatctctacaaaaaaatcacaacaagattcactgagtgtcatggtgctcacctgtggtcccagctactgggaaggctgatgtggcaggattgctt--------gagtttgaggctacagtgagccgtgattggaccactgaactccatcctgagtgacaaggcaaggtcctgtttctaaagaaaaaaacgacattggaatcagggtcCCCTCCATCCTAAGGTGCCTACAAGGCATCTCTCTCTGCAAACGAGTAAACATCATCTTCCAACTCCTCACAGAGTGGAGGAGCAGGAAAACTCCCTCACCTCATTTCTGTGCCACTTGGGAGGTCTGGACAGCCCAATAACCAGCTCCTTGCTGATGATGCAATCAGGAAATGGCTCGAGTTGAGCTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 39349 1142 - 317753 TAAGTCCAAACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAGCCTTA--------------CTCCATTTCACCTGCTATGGAGTCCAACTGAGCCTCATCTGTCCCCTGAATGCACTCTTT--CTCCTCTGGGAGTCTCTGAAGTGGGTGATACCCTCTGCTTATAATACACTTCCCCTTAAACCTCTACTCTCTTCCTGGCTAGCTTCGGCTCCTCTGTCACTTGTCTGCTTTGGCATCACCTCCTCACAGAAGACTTCCTTGACTCCCAAGATTCTCAGGAGCATGGCAGGTGAGGTGCTCCTCCCATGAATGGATGGAGATTAGGTTGAGTGTGTTATTCATGCTTAATTCACCAGTGCTTAGCTCAGTACCTGGCACAAAACAGTTACCGTGGTGGCCAAAGTaataac------ccccaccccc---accaattGCTCATGTCCTATGTTACACAGCACAATTACATAGGAAGGGGGAATTAAGAGTGCAGATAAAATTAatgttgctaatcagctgaccttaaaacaAGATTATCCTGGAGTATCTAGGAGAGCCCATGTAATTACAAGCATtctttaaaagtggaagagggaggcagaaggttAAGAACCAGAGACagtgggcacaatggctcatgcctgtaataccaatactttgggaggccaaggcaggaaaatcccttgagtgcaggagttcaaggtcagctctggcaacata-gtgaggccccatctctacaaaaaaatcaaaacaaaattcacTGAGTGTCATGgtgctcacctgtggtcccagctactgggaaggctgatgtggtaggactgcttgagcctcggagtttgaggctacagtgagccgtgattggaccactgaactccatcctgaATGACAGGGCAAGGTcctgtttctaaagaaaaaaacaacattggGATCAGGGTCCCCTCCATCCCAAGGTGCCTACAAGGCATCTCTCTCTGCAAACGAGTCAACATCATCCTCCAACTCCTCACAGAGTGGAGCAGCAGGAAAACTCCCTCACCTCATTTCTGAGTCACTTGGGAGGCCTGGACAGCCCAATAACCAGCTCCTTGCTGATGAAGCAATCAGGAAATGGCTAGAGTTGAGCTAGGGAGAATTTGGATCCTTCTTTTGGTTCTCA i papAnu2.JH684865 I 201 C 0 s chlSab2.chr21 124152336 1128 - 127223203 TAAGTCCAAACTCCTTAACAGCCCCTGCTCTGCCCTGCCTTGCAAGGCAGCCTCACTG--CTTGCCCCTCTCCATTTCACCTGCTATGGAGTCCAACTGAGCCTCAtcttt--------------------cccctctgggagtctctgaagtgggtgataccctctgcttataatacgcttccccttaaacctctactctcttcctggctagcttcggctcctctgtcacttgtccactttggcatcccctcctcacagaagacttccttgactccccaGATTCTCAGAAGCATGGCAGGTGAGGTGCTCCTCCCATGAATGCATGGAGATTAGGGAGAGTGTGTTATTCATGCTTAATTCACCAGTGCTTAGCTCAGTACCTAGCATAAAACAGTTACTGTGGTAGCCAAAGTAATAAC------CCCCACCCCC---ACCAATTGTTCATGTCCTATGTTACACAGCACAAttacataggaagggggaattaagagtgcagataaaattaatgttgaaaatcagctgaccttaaaacaagattatcctggaatatctagaagagcccatgtaattacaagcattctttaaaagtggaagagggaggcagaaggttaagaaccagagacagtgggcacaatggctcatgcctgtaataccaatacttcgggaggccaacgcaggaaaatcccgtgagtgcaggagttcaaggtcagccctggcaacacagttgaggccccatctctacaaaaaaatcaaaacaaaattcactgagtgtcacggtgctcacctgtggtcccagctactgggaaggctgatgtggcaggattgctt--------gagtttgaggctacagtgagccgtgattggaccactgaactccatcctaagtgacaaggcaaggtcctgtttctaaag-aaaaaacgacattggaatcagggtcCCCTCCATCGTAAAGTGCCTACAAGGCATCTCTCTCTGCAAACGAGTAAACATCATCTTCCAACTCCTCACAGAGTGGAGGAGCAGGAAAACTCCCTCACCTCATTTCTGTGCCACTTGGAAGGTCTGGACAGCCCAATAACCAGCTCCTTGCTGATGATGCAATCAGGAAATGGCTCGAGTTGAGCTAAGGAGAATTTGGATCCTTCTTTTGGTTCTCA i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I a score=31470.000000 s hg38.chr17_GL383563v3_alt 19630 17 + 375691 GTAGGCAGGGTAGGggc s panTro4.chr4 121841438 17 + 193495092 ATAGGCAGGGTAGGggc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232074 17 - 23176937 ATAGGCAGGGTAGGggc i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59778190 17 + 198365852 TTAGGCAGGGTAGGggc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127696612 17 - 192294377 ACAGGCAGGGTAGGggc i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 40491 17 - 317753 ATAGGCAGGGTAGgggc i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124153464 17 - 127223203 ACAGGCAGGGTAGGGgc i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e nomLeu3.chr17 46798496 271 - 99891981 M a score=235946.000000 s hg38.chr17_GL383563v3_alt 19647 182 + 375691 caggcatggtggctcatacctgtaatccttgcactgtggggggccaaggtgagaggattgcttgaggccaggagctcaagaccagcctggacaacatagcaagacctgggtggcatacacctgtggtccctactacttggtaggatgaggtgggaggattgatcacttgatcccaggagttt s panTro4.chr4 121841455 182 + 193495092 caggcatggtggctcatacctgtaatccttgcactgtggggggccaaggtgagaggattgcttgaggccaggagctcacgaccagcctgggcaacatagcaagacctgggtggcatacacctgtggtccctactacttggtaggatgaggtgggaggattgatcacttgatcccaggagttt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232091 182 - 23176937 caggcatggtggttcatacctgtaatctttgcactgtgggaggccaaggtgagaggattgcttgaggccaggagctcaagaccagcctgggcaacatagcaagacctgggtggcatacacctgtggtccctactacttggtaggatgaggagggaggatcaatcacttgatcccaggagttt i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59778207 182 + 198365852 caggcatggtggctcatacatgtaatccatgcactttgggaggccacggtgagaggatcgcttgaggccacgagctcaagaccagcctggacaacacagcaagacccgggtggcatgcacctgtagtccccactacttggtagaatgaggtaggagggttgatcacttgatcccaggagttt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127696629 182 - 192294377 caggcatggtggctcatacctgtaatccttgtactgtgggaggccaaggtgagaggattgcttgaggccaggagctcaagaccagcctgggcaacatagcaagacctcggtggcatgcacctgtggtccctattacttggtaggatgaggtgggaggactgatcacttgatcccaggagttt i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124153481 182 - 127223203 caggcatggtggctcatacctgtaatccttgtactgtgggaggccaaggtgagaggattgcttgaggccaggagctcaagatcagcctgggcaacatagcaagacctcggtggcatgcacctgtggtccctactacttggtaggatgaggtgggaggactgattatttgacctcaggagttt i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e papAnu2.JH684865 40508 0 - 317753 C e nomLeu3.chr17 46798496 271 - 99891981 M a score=127608.000000 s hg38.chr17_GL383563v3_alt 19829 129 + 375691 caggctgcagtgagccatgat---------------------------------------cacaccactgcacttcagcctgggtgacagagccagaccatgtcacaaaaagttagaaa------------------aaaaa--------aagaGAGAGGGAGAgagactatacacaggcaccaccacatttgg s panTro4.chr4 121841637 132 + 193495092 caggctgcagtgacccatgat---------------------------------------cacaccactgcacttcagcctgggtgacagagccagaccatgtcacaaaaagttagaaa---------------gaaaaaaa--------aaGAGAGAGGGAGAgagactatacacaggcaccaccacatttgg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232273 133 - 23176937 caggctgcagtgagccatgat---------------------------------------cacactactgcacttcagcctgggtgacagagccagaccacatcacgaaaagttagaaa---------------gaaaaaaa-------CAAGAGAGAGGGAGAgagactatacacaggcaccaccacatttgg i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46798767 147 - 99891981 Caggctgcagtgagccatgat---------------------------------------cacaccactgcacttcagcctgggtgacagagccagaccatgtctcaaaaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaa--------aaGAGAGACGGAGAgagactataggcaggtacccccacatttgg i nomLeu3.chr17 M 271 C 0 s rheMac3.chr3 59778389 166 + 198365852 caggcttcagtgagccataatggcttaccactgcactccataatgcactgttccataatgggcaccactgcactccagcctgggtgacagagccagacgatgtctcaaaaagtgacaaa---------------aaaaaaaa-------------aGAGAGAGAgagactataggcagccactgccacatctgg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127696811 96 - 192294377 ca-----------------------------------------------------------------------------------gacagagccagaccatgtctcaaaaagttaaaaa---------------aaaaaaaaaaAAAAAAGAGAGAGAGAGAGACAgactataggcaggcaccaccacatttga i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124153663 82 - 127223203 ca-----------------------------------------------------------------------------------gacagagccagactatgtctcaaaaagtaaaaaa---------------aaaaaaa--------------aaAGAGAGAGagactataggcaggcaccaccacatttgg i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e papAnu2.JH684865 40508 0 - 317753 C a score=707465.000000 s hg38.chr17_GL383563v3_alt 19958 304 + 375691 ctaatttttaaatattctgtagagacaaggtcttgctaggttgcccaggctagtctaaaactcctggcatcaggctgggcatggtggctcatgcttgtaatcgcagcactttgggaagctaaggcaggcaaatcacctgaagtctggagttcgagaccagcctggccaacacggtgaaactctgactctatcaaaaatacaaaaattagctgggcagtagtggcgtgta-------cctgtagtctcacctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtggacc s panTro4.chr4 121841769 304 + 193495092 ctaatttttaaatattctgtagagacaaggtcttgctaggttgcccaggctagtctaaaactcctggcatcaggctgggcatggtggctcatgcttgtaatcccagcactttgggaagctaaggcaggcaaatcacccgaagtctggagttcgagaccagcctggccaacatggtgaaactctgactctatcaaaaatacaaaaattagctgggcagtagtggcgtgta-------cctgtagtctcacctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtggacc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232406 304 - 23176937 ctaatttttaaatattctgtagagacaaggtcttgctaggttgcccaggctagtctaaaactcctggcatcaggttgggcatggtggctcatgcttgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaagtctggagttcaagaccagcctggccaacatggtgaaactctgactctatcaaaaatacagaaattagctgggcagtagtggcatgta-------cctgtagtctcagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtggacc i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46798914 311 - 99891981 ctaatttttaaatattctgtagcgacaaggtcttgctaggttgcccaggctggtctaaaactcctgacatcaggctgggcatggtggctcatgcttgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaaactccgactctactaaaaatacaaaaataagccgggcagtagtggcatgtacctgtagcctgtagtctcagctactcaggaggctgaggcaggagaatcacttgaaccttggaggcagaggttgcagtgggcc i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59778555 301 + 198365852 ctaatttttaaatattctgtagagatgaggtcttgctaggttgcccaggctggtctaaaactcctggcatcaggccaggcgcagtggctcatgcctgcaatcccagcactttgggaggccaaggcaggcaaatcacctgaggtcaggagttcaagatcagcctggccaacacggcgaaaccccgtctctactaaaaatacaaaaattggccaggcagtagtggcatgtg-------cctgtaatcctaggtactcaggaggctgaggcaggagaatcacttgaac---ggaggcggaggttgcagtgagcc i rheMac3.chr3 C 0 I 53 s macFas5.chr3 127696907 303 - 192294377 ctaatttttaaatattctgtagagacaaggtcttgctaggttgcccaggctggtctaaaactcctggcatcaggctgggcatgggggctcatgcttgtaatcccagcactttgggaggctgaggcaggcaaatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaaactccgactctactaaaaatac-aaaattagccgggcagtagtggcgtgta-------catgtagtctcagctacttgggaggctgagtcaggagaatcacttgaacctgggaggcggaggttgcagtgggcc i macFas5.chr3 C 0 I 6 s papAnu2.JH684865 40508 304 - 317753 ctaatttttaaatattctgtggagatgaggtcttgctaggttgcccaggctggtctaaaactcctggcatcaggctgggcatgatggctcatgcttgtaattccagcactttgggaggctaaggcaggcaaatcacctaaagtcaggcgttcgagaccagcctggccaatatggtgaaactctgactctactgaaaatacaaaaattagccgggcagcagtggcgtgta-------cctgtagcctcagctacttgggagagtgaggcaggagaatcacttgaacctgggaggcagaggtcgcagtgggcc i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124153745 302 - 127223203 ctaatttttaaatattctgtagagacaaggtcttgctaggttgcccaggctggtctaaaactcctggtgtcaggctgggcatggtggctgatgcttgtaatcccagcactttagaaggctgaggcaggcaaatcacctgaagtcaggagtttgagaccagcctggccaacatggtg--actccgactctactaaaaatacaaaaattagccgggcagtagtggcatgta-------cctgtagtctcagctacttgggaggctgagtcaggagaatcacttgaacctgggaggcggaggttgcagtgggcc i chlSab2.chr21 C 0 I 6 e calJac3.chr2 1425200 23395 + 204313951 I a score=55527.000000 s hg38.chr17_GL383563v3_alt 20262 59 + 375691 c------catcactgcactccaccctgggtgacagagcgagact--GTCAAAaacaacaacaacaa---t s panTro4.chr4 121842073 64 + 193495092 c------catcactgcactccaccctgggtgacagagcgagactctgtcaaaaacaacaacaacaacaat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232710 60 - 23176937 c------catcactgcactccaccctgggtgacagagcgagactctgtcaaaaacaacaacaacaa---- i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46799225 57 - 99891981 aagatcgtaccactgcactccaccctgggcaacagagtgaaactctatcttaaaaaa------------- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127697216 57 - 192294377 ------gcaccactgcactccactctgggccacagagtgagactctgtctgaaaaaaaaacag------- i macFas5.chr3 I 6 C 0 s papAnu2.JH684865 40812 50 - 317753 ------gcaccactgcactccaccctgggtgacagagcaag-ctctgtctaaaaaga------------- i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124154053 48 - 127223203 ------gtaccactgcactccaccctaggcaacagagtgagactctgtctgaaa---------------- i chlSab2.chr21 I 6 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e rheMac3.chr3 59778856 53 + 198365852 I a score=354449.000000 s hg38.chr17_GL383563v3_alt 20321 204 + 375691 aacaaaaacaaaaacaacaacaacaaaaaaaa----ctcctggcatcaagacatcttcctgtcttagcctcccaaagccctgggattataCTGTTTCC----TATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT---AAAGGAAGAAAaaaaaa-acagataatggcaaatgttggtgaaggccgggcatggtgg--cagcctgtaattc s panTro4.chr4 121842137 204 + 193495092 aacaaaaacaaaaacaacaacaacaaaaaaaa----ctcctggcctcaagacatcttcctgtcttagcctcccaatgccctgggattataCTGTTTCC----TATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT---AGAGGAAGAAAaaaaaa-acagataatggcaaatgttggtgaaggccgggcatggtgg--cagcctgtaattc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232770 183 - 23176937 --------------------caacaacaaaaa----ctcctggcatcaagacatcttcctgtc--agcctcccaatgccctgggattataCTGTTTCC----TATAATTGAAGACACTTTTTCTCATACTGCTTTAAGGTAT---AAAGGAAAAAAAaaaaacacagataatggcaaatgttggtgaaggccgggcatggtgg--cagcctgtaattc i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46799282 180 - 99891981 --------------------aaaaaaaaaaaa----ctcctggcatcaagacatcttcctgtcttagcttcccaataccctgggattataTTGTTTCC----TATAATTGAAGGCACTCGTTCTTATACTGCTTTAAGGTAT---AAAG------Aaaaaaa-acccataacgacaaatgttggtaaaggccgggcatggtggctcagcctgtaattc i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59778909 207 + 198365852 aacaaatacaa----acaaacaaacaaacaaaaaacctcctggcatcaagagatcttcctgtctcagcctcccaatgccctgggtttataTATTTTTTTCAGTATAATTGAAGACACTTGTTCTTATATGGCTTTAAGAGAT------AAAGaaaaaaaaaa-acagataataacaaatgttggtgaaggccgggcatggtagctcagcctgtaattc i rheMac3.chr3 I 53 C 0 s macFas5.chr3 127697273 179 - 192294377 ------------------------aaaacaaa----ctcctggcatcaacacatcttcctgtcttagcctccaaatgccctgggattaTGTTGTTTCC----TATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT------AAAAGGAAAAAAAA-AAACATAATGACAAATGTTGGTGAAggccaggcatggtggctcagcctgtaattc i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 40862 190 - 317753 -------------------aaaaacaaacaaa----atcctggCATCAAcacatcttcctgtcttagcctcccaatgCCCTGGGATTATACTGTTTCC----TATAATTGAAGACACTTGTTCTTATATTGCTTTAaggtattaaaaaaacaaaaacaaaaa-caacataatgACAAATGTTggtgaaggccaggcatggtggctcagtctgtaattc i papAnu2.JH684865 C 0 I 322 s chlSab2.chr21 124154101 189 - 127223203 ----------------aaaaacagaaaacaaa----ctcctggcatcagcacatcttcctgtcttagcctcccaatgccctgggattataTTGTTTCC----TATAATTGAAGACACTTGTTCTTATACTGCTTTAAGGTAT----AAAAGAAAAAGaaaaa-aaacataatgacaaatgttggtgaaggccaggcatggtggctcagcctgtaattc i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I a score=2100.000000 s hg38.chr17_GL383563v3_alt 20525 1 + 375691 c s panTro4.chr4 121842341 1 + 193495092 c i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232953 1 - 23176937 c i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46799462 1 - 99891981 c i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59779116 1 + 198365852 c i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127697452 1 - 192294377 c i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124154290 1 - 127223203 c i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I e papAnu2.JH684865 41052 322 - 317753 I a score=3098137.000000 s hg38.chr17_GL383563v3_alt 20526 1435 + 375691 agaacttagggaggctgaggtgggcagatcacttgaggccaggagtatgagaccagcctgggcaacatggtaaaatcccaccactacagaaa--aatctaaaaattagccaggcatggtggcgtacacctgtaattttcagctacccaggaggctgagatgagagaatcacttgtgcctgggaggtcacggctgcagtgaactgtgatggcatcattgcactgcggcctgagagacagagcaagcccctatctagaaaaaaa---aa-------tgtcagt---------gaagatgtggaggaattggaacccacatacattactggtgggaacataaaattgtgtaaccattttgtttgggtatttcttTTCTTGTCATTTTAATTGGA-------TTTTTAAAAAATCAagacggggtttcactatcttgcccaggctggtcttgaattcacgggctcaagccatcctcctagctgagcctcctgagtagctgggatt---acaggtgtgagccattgcacccaactggtatagccacgttagaaaacagtctggcagtttctcaaaaggctaaatgtacagtcatcctataatgcaacaatttcactcctaggcatatatcccagaaaaataaaaatatatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcataatgaccaatacatggaatacatggaaacaacccaaatatccaccaactgatgaacagataaacaaaatgcagtgtgtctctaccatggaatact-----gccatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacactgtggtaagaggg-----aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagtgacaaaaaaattaatcaatggttgcctaaggctgggggcaaaggtaggtggggagagtaggaggtagtggctaaggggtatggatttctctatagagtaatgaaaggttctaaaagtgactgtggtgatcgatgcacagctctgtgaatattctaaaacctactgaattgcagatttcaataaataaagtgaatg-----gtatgtga---atattttaataaagctattaTTTAAAATAATAATAATAGGGggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccagtcggagcaacacggcaagatcccgtctctatgataaaaa--------attacctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgagagaaccacttgagcccaggagtttgaggctacagtgaaccatgatcatgtcactgtactgtagcctaagcaacagagcaagacgctgtctctgaaaaggaaagaaaac s panTro4.chr4 121842342 1435 + 193495092 agaacttagggaggctgaggtgggcagatcacttgaggccaggagtatgagaccagcctgggcaacatggtaaaattccatcactacaaaaa-gaatataaaaattagccaggcatggtggcgtacgcctgtaattttcagctactcaggaggctgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtgaactgtgatggcatcattgcactgcggcctgagagacagagcaagcccctatctagaaaaaaa---aa-----aatgtcagt---------gaagatgtggaggaattggaacccacatacattactggtgggaacataaaatcgtgtaaccattttgtttgggtattt---TTCTTGTCATTTTAATTGGA-------TTTTTAAAAAATCAACacagggtttcactgtcttgcccaggctggtcttgaattcatgggctcaagccatcctcctagctgagcctcctgagtagctgggatt---acaggtgtgagccattgcacccaactggtgtagccacgttagaaaacagtctggcagtttctcaaaaggctaaatgtacagtcatcctataatgcaacaatttcactcctaggcatatatcccagaaaaataaaaatatatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcataatgaccaatacatggaatacatggaaacaacccaaatatccaccaactgatgaacagataaacaaaatgcagtgtgtctctaccatggaatact-----gccatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacaccatgctaagagga-----aaaaaaagccacaaaagatcacacattgtacaattctatttgtccagattaggcaaatctatagtgacaaaaaaattaatcaatggttgcctaaggctgggggagaaggtaggtggggagagtaggaggtagtggctaaggggtatggatttctctatagggtaatgaaaggttctaaaagtgactgtggtgatcgatgcacagctctgtgaatattctaaaacctactgaattgcagatttcaataaataaagtgaatg-----atatgtga---atattttaataaagctattaTTTAAAATAATAATAATAGGGggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccagtcggagcaacgtggcaagatcccgtctctatgataaaaa--------attagctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgagagaaccgcttgagcccaggagtttgaggctacagtgaaccatgatcatgtcactgtactgtagcctgagcaacagagcaagacgctgtctctgaaaaggaaagaaaac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8232954 1454 - 23176937 agaacttggggaggctgaggtgggcagatcacttgagaccaggagtatgagatcagcctgggcaacatggtaaaatcccatcactacagaaaaaaatataaaaattagccaggcatggtggcgtacacctgcaattttcagcaactcaggaggctgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtgaactgtgatggcatcattgcactgcagtctcagagacagagcaaacccctatctagaaaaaaa---aaaaaaaaatgtcagt---------gaagatgtggaggaattggaacccacatatattactggtgggaacataaaatcgtgtaaccattttgtttgggtatttCTTTTCTTGTCATTTTAATTGGA-------TTTTTTAAAAATCAACacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaagccatcctcctagctgagcctcctgagtagctgggatt---acaggtgtgagccattgcacccaactggtgtagccactttagaaaacagtctggcagtttctcaaaaggctaaatgtacagtcatcctataatgcaacaatttcactcctaggcataaatcccagaaaaataaaaatatatgtccacacaaaaac---tggtacaacaatcttcatagcagcattattcataatgaccaatacatggaatacatggaaacaacccaaatatccaccaactgatgaacagataaacaaaatgcagtgtgtctctaccatggaatact-----gccatagaaggaatgaaatatggatacacactatgacatacaggaactttgaaaacactgtgctaagaggg-----aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagtgacaaaaaaattaatcaatggttgcctaaggctgggggcaaaggtaggtggggagagtaggaggtagtggctaaggggtatggatttctctacagggtaatgaaagcttctaaaagtgactgtggtgatcgatgcacagctctgtgaatattctaaaacctactgaattgcagatttcaataaataaagtgaatg-----gtatgtgaatcatattttaataaagctattaTTTAAAATAATGATAAT-GGGggctgggcacaggtggtcatgactgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccagtctgagcaacctggcaagatcccgtctctatgataaaaaacgaaaacattagctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgagaaaactgcttgagcccaggagtttgaggctacagtgaaccatgatcatgtcactgtactgtagcctgagcaacagagcaagaccctgtctctgaaaaggaaagaaaac i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46799463 1423 - 99891981 agaactttgggaggctgaggtgggcagatcacttgaggccaggagtatgagaccaacctaggcaacatggtaaaatcccatc--------------tataaaaattagccagg-atggtggcatacacctgtaattttcagctactcaggaggctgagatgagagaatcatttgtgcctgggaggtcaaggctgcaatgaactgtgatggcatcgttgcgctgcagcctgagagacagagcaagcccctgtctagaaaaaaa---aa----aaatgtcagt---------gaagatgtggaggagctggaacccacatacattagtggtgggaacattaaatcgtgtaaccactttgTTTGGGTAGTTCTGTTCTTGTCATTTTAATTGGA------ttttttttttaatcaagacagggtttcactatcttgcccaggctggtcttgaatttattggctcaat---tcctcccagccgagcctcctgagcagctgggatt---acaggtgtgagccattgcacccaactggtgtagccactttagaaaacagtgtggcagtttctcaaaaggctaaatgtacagtcatcatataatgcaacaatttcactcctaggcatatatcccagagaaataaaaatgtatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcataatggcc---------aatacatggaaacaacccaaatgtccatcaactgatgaacagataaacaaaatgcagtgtgtctctaccatgtaatatt-----gccatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacactgtgctaagaggg-----aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagtgac-gaaaaatgaatcaatggctgcctaaggctggtggccaaggcaggttgggggagtaggaggtagtggctaaggggtatggatttctctacagggtaatgaaaggttctaaaagtgactgtggtgatcgatgcacagctctgtgaatattctaaaacctactgaattgcagatttcaataaataaagtgaatg-----gtatgtgaatcatattttaataaagctattaTTTAAAATAATAATAATAGGGggctgggcacaggtggtcatgcctgcctgtaatcccagcactttgggaggctgaggcaagaggatcacttgaagtcagtagttttgagcccagtctgagcaacctggcaagatcctgtctctatgataaaaaatgaaaaaattagctggacatggtggcacatgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagtttgaggct-cagtgaaccaagatcatgtcactgtactgcagcctgagcaacacagcaagaccctgtctctgaaaaggaaagaaaac i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59779117 1410 + 198365852 agaactttgggaggctgaggtgggcagatcacttgaggccaggagtaagagaccagcctgagcaacatggtaaaactccatcactacaaaaa--catataaaaattagccaagcatggtggcatgcacctgtaattttcagctactcagaagcctgagatgagaaaatcacttgtgcctgggagatcaaggttgcagtgaactgtgatggcatcactgtgctgcagccagagagacagaacaagcccctgtctagaaaaaaa--caa----aaatgtcagt---------gaagatgtggaggaactggaactcacatacattactggtgggaacataaaatcatgtaaccac----tttgggtatttcttttcgtgtcattttaattgga-----tttttttaaaaaatcaagataaggtctcactatcttgcccaggctgatcttgaacttgtgggctcaagtaatcctcccagctgagcctcctgagtagctgggact---acgggtgtgagccattgcacccaactggtgtagccactttagaaaacaaactgtcagttcctcaaaaggctaaatatacagtcatcatataataccacaatttcactcctaggcatatatcccagagaaataaaaatatatgtccacacaaaaac---ttgtacagcaatcttcacagcaccattattcataatggct---------aatacacggaaacaacccaaatgtccaccaactgatgaacagataaacaaaatgcagtgtgtctctaccacggagtattattcagtcatagaaggaatgaaatattgatacacactatgacataaaggaactttgaaaacac--tgctaagaggg------aaaaaagccacaaaagatcaaatattgtacaattctatttgtccagattaggaaattctacagcgac-aaaaaatgaatcaatggttgcctaaggctgggggccaaggcaggtggggggagtaggaggtactggctaaggggtacagatttctctatagggtaatgaaaggttctaaaagtgactgtggtgatcgatgcacagctctgggaatactctaaaacctactgaattgcagatttcaataaataaa-taaatggaagagtatgtgaatcatattttaataaagctattatttaaaa-------aATAAGTggctgggcacaggtggtcatacctgcctgtaatcccagcactttgggaggctgaggcaggag--------------------tttgagtctagtctgagaaacctagcaagatcccatctctatgataaaaaataaaaaaattagctgggcatggtggcacacgtctgtagtcccagctacttgggagact-------gaggattgcttaagcccaggagtctgaggctgcagtgaaccatgatcatgtcactgtactgcagcctgggcgacagagcaagaccctgtctctaaaaaggaaagaaaag i rheMac3.chr3 C 0 I 189 s macFas5.chr3 127697453 1395 - 192294377 agaactttgggaggctgaggtgggcagatcactcaaggccaggagtatgagaccagcctgggtgacatggtaaaatccgatcactccaaaaa--tatataaaaattagccaggcgt--------------------------------------tgagatgagagaatcacttgtgcctgggaggtcaaggctgcagtg-actgtgatggtgtccttgggctgcagcctgaaagacagagc-agcccctatctagaaaaaaa---aa----TAATGGCAGTGAAGATGTGgaagatgtggaggaattggaacccacatacattactggtgggaacataaaatcgtgtaaacactttgtttgggtatttCTTTTCCTGTCATTTTAATTAGA---ttttttttttttaaatcaagacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaat---tcctcccatcggagcctcctgagtagctgggatt---acaggtgtgagccatcacacccaactggtgtagccacttaagaaaacagtctggcagtttctcaaaaag-------tacagtcagcatataatgcaacaatttcactcctaggcatatatcccagagaaataaaaatatatatccacacaaatatatattgtacaacaatcttcatagcagcattattcataatggcc---------aaaacatggaaacaacccaaatgtccactaactgatgaacagataaacaaaatgcagcgtgtctctaccatggaatattactcagccataggagg-atgaaatattgatacacactatgacataaagcaactttgaaaacattgtgctaagaggg-----aaaaaaagccacaaaagatcacatattgtacaattctatttgtccaaattaggcaaatctatagcgacaaaaaaatgaatcaatggttgcctaaggctgggagccaaggcaggttgggggagtaggaggtagtggctaaggggtatggatttctctatagggtaataaaaggttctaaaagtgactgtggtgatcgatgcacagctct--gaatattctaaaacctactgaattgcagatttcaataaataaagtgaatg-----gcatgtgaataatattttaacaaagctattaTTTAAAATAATAATAATAGGGGGCTGGGCACAGGTAGTCATGCCTgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcctagtgtgagcaacctggcaagatcccatctctacaataaaaaatgaaaaaat-------------tggcacacgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagtttgaggctacagtgaaccatgaccacgtcactgtactgcagcctgagcaacagagcaagactctgtctctaaaaaggaaagaaaac i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 41374 1454 - 317753 agaattttgggaggctgaggtgagcagctcccttgaggccaggagtatgagaccagcctaagcaacatggtaaaatcccatcactacaaaaa--aatataaaaattagccaggcatggtggcgtacacctgtaattttcagctactcaggagcctgagatgagagaatcacgtgtgcctgggaggtcaaggctgcagtgaactgtgatggcatcattgcactgtagcctgagagacagagcaagcccctatctagaaaaaaaaataa----taatgtcagc---------GAAGATGCGGAGGAATTGGAACCCACATACTTTACTGGTGGGAACATAAAATCGTGTAATCAC----TTtgggtatttcttttcttgtcattttaattagattctttttttttttttaatgaagacagggtttcactatcttgcccaggttggtcttgaattcatgggctcaagccatcctcccagctgagcctcctgagtagctaggattacaacaggtgtgagccatcacacccaactggtgtagccactttagaaaacagtctggcagtttctcaaaaggctaAACGTATAGTTATCATATAATGcaacaatttcactcctaggcatatatcccagaaaaataaaaatatatgtccacacaaaaac---ttgtacaacaatcttcatagcagcattattcacagtggCC---------AAAacatagaaacaacccaaatatccaccaactgatgaacagataaagaaaacacagCGTGTCTCTACCacggaatattactcagccacagAAGGAATGAAACATTGATACACACTATGACATAAAGAAACTTTGAAAACGTTGtgctaagagggaaaaaaaaaaaagccacaaaagatcacatattgtacAATTCCATTTGACCAGATTAGGCAAATCCATAGTGAC-AAAAAATGAATCAAAGGTTGCCTAaggctggaggccaaggcaggtgggggGAGTAGGAGGTAGTGGCTAAGGGGTATGGATTTCTCTACAGGGTAATAAAAGGTTCTAAAAGTCACTGTGGTGATCGATGCACAGCTCTCTGAATATTCTAAAACCTACTGAATTGCAGATTTCaataaataaagtgaatg-----gcatgtgaataatattttaataaagctattatttaaaataataataatagggggCTGGGCACAGGTGGTCAtgccagcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagccCAGTCTGAGCAAcctggcaagatcccatctctatgataagaaatgaaaaaattagctgggcatggtggcacatgtctgtagtcccagctacttgggagactgaagtgggaaaactgtttgagcccaggagtttgaggctacagtgaaccatgaccatgtcattgtactgcagcct----aacagagcaagaccctgtctctaaaaaggaaagaaaac i papAnu2.JH684865 I 322 C 0 s chlSab2.chr21 124154291 1395 - 127223203 agaactttgggaggctgaggtgggtagatcactcaaggccaggagtatgaggccagcctgggcgacacggtaaaatccgatcactccaaaaa--tatataaaaattagccaggcat--------------------------------------tgagatcagagaatcacttgtgcctgggaggtcaaggctgcagtg-actgtgatggtgtccttgggctgcagcctgagagacagagc-agcccctatctagaaaaaaa---aa----taatggcagtgaagatgtggaagatgtggaggaattggaacccacatacattactcgtgggaacatcaaatcgtgtaaacactttgTTTGGGTACTTCTTTTCCTGTTATTTTAATTAGA---ttttttttttttaaatcaagacagggtttcactatcttgcccaggctggtcttgaattcatgggctcaat---tcctcccatcggcgcctcctgagtagctgggatt---acaggtgtgagccatcacacccaactggtgtagccacttaagaaaacagtctggcagtttctcaaaatg-------tacagtcagcatataatgcaacaatttcactcctaggcatatatcccagagaaataaaaatatatatccacacaaatatatattgtacaacaatcttcatagcagcattattcataatggcc---------aaaacatgaagacaacccaaatgtccaccaactgatgaacagataaacaaaatgcagcgtatctctaccacggaatattactcagcaataggacg-atgaaatattgatacacactatgacataaaggaactttgaaaacattgtgctaagaggg-----aaaaaaagccacaaaagatcacatattgtacaattctatttgtccagattaggcaaatctatagcgacaaaaaaatgaatcaatggttgcctaaggctgggagccaaggcaggttgggggagtaggaagtagtggctaaggggtatggatttctctatagggtaataaaaggttctaaaagtgactgtggtgatcgatgcacagctct--gaatattctaaaacctactgaattgcagatttcaataaataaagtgaaag-----gcatgtgaataatattttaataaagctattaTTTAAAATAATAATAATAGGGGGCTGGGCACAGGTAGTCATGCCTgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaggtcaggagttttgagcccactctgagcaacctggcaagatcccatctctacgataaaaaatgaaaaaat-------------tggcacacgtctgtagtcccagctacttgggagactgaagtgggagaactgcttgagcccaggagtttgaggctacagtgaaccatgaccacgtcactgtactgcagcctgagcaacagagcaagactctgtctctaaaaaggaaagaaaac i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I a score=688920.000000 s hg38.chr17_GL383563v3_alt 21961 301 + 375691 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaataataaaagagcactgaataatgacggtgagtggctggttaggctcagttgctagctaaatggctTCTAAAAAATTC---AATAAAGTTACAGCTCTGGGGACAGTCATGTAGTCAAAGAATGAAGGCGAAATTCATTACAATTGCCCATGGTCTTTATTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAACAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA s panTro4.chr4 121843777 301 + 193495092 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaataagaaaagagcactgaataatgacggtgagtggctggttaggctcagttgctagctaaatggctTCTAAAAAATTC---AATAAAGTTACAGCTCTGGGGACAGTCATGTAGTCAAAGAATGAATACTAAATTCATTACAAATGCCCATGGTCTTTATTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8234408 304 - 23176937 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaatagtaaaagagcactgaataacgagggtgagtggctggttaggctcagttgctagctaaatggctTCTAAAAAATTCATTAATAAAGTTACAGCTCTGGGGACAGTCATGTAGTCAAAGAATAAATGCTAAATTCATTACAAATGCCCATGGTCCTTCTTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46800886 304 - 99891981 aaaTGCaagtttttatcactttgtgagtgtagccaagttggaggagaaatagacaataataaaagagcactgaataacgagggtgagtggctgattaggctcggttgctagctaagtggctTCTAAAAAATTCATTAGTAAAGTTATAGCTCTGGGGACAGTCATGCAGTCAAAGAATGGATGGTAAATTCATTACAAAGGCCCATGGTCTTTCTTCACATGCCTTCTAGTGGAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAACGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59780716 304 + 198365852 aaatacaagtttttatcactttgtgagtatagtcaagtttgaggagaaatagacaagaataaaagagcactgaataatgagagtaagtggctggttaggcccagttgctagctaagtTGCTTCTGAAAAATTCATTAGTAAAGTTACAGCTCTAGGGACAGTCATGCAGTCAAAGAATGAATGCTAAATTCATTACAAATGCCGATGGTCTTTCTTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAATGATAGCAGCTGTTTATTAAAGACTACAAAAAAGAAA i rheMac3.chr3 I 189 C 0 s macFas5.chr3 127698848 300 - 192294377 aaaTGCAAGTTTGTATCCCTTTGTGAGTGTAGCCAAGTTGGAGGAGAAATAGACAAGAACAAAAGAGCACTGAATAAGGAGGGTGAGTGGCTGGTTAGGCTTGGTTGCTAGTTAAGTGGTTTGTAAAGAATTCATTAGTAAAGTTACAGCTCTGGGGACAGTCATG----CAAAGAATGAATGCTAAATTCATTACAAATACCCATGATCTTTCTTTACATGCCTTCTAGTGAAAAATTCCTAAGTGCCTAAATAGCAAGTCTGCAACAATAGCAGCTGTTTGCTAAAGACTACGAAAAAGAAA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 42828 304 - 317753 aaatgcaagtTTGTATCACTTTGTGAGTGTAGCCAAGTTGGAGGAGAAATAGGCAAGAACAAAAGAGCACTGAATAAGGAGGATGAGTGGCTGGTTAGGCTCAGTTGCTAGCTAAGTGGCTTCTAAAAACTTCATTAGTAAAGTTACAGCTCTGGGGACAGTCATGTAGTCAAACAATGAATGCTAAATTCATTACAAATACCCATGGTCTTTCTTCACATGCATTCTAGTTAAAAATTTCTAAGTGCCTAAATAGCAAGTCTGCAAAGATAGCAGCTGTTTATTAAAGACtgcaaaaaagaaa i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124155686 298 - 127223203 aaaTGCAAGTTTATATCCCTTTGTGAGTGTAGCCAAGTTGGAGGAGAA--AGACAAGAACAAAAGAGCACTGAATAACCAGGGTGAGTGGCTGGTTAGGCTCGGTTGCTAGCTAAGTGGTTTCTAAAGAATTCATTAGTAAAGTTACAGCTCTGGGGACAGTCATG----CAAAGAATGAATGCTAAATTCATTACAAATGCCCATGATCTTTCTTTACATGCCTTCTAGTGAAAAGTTCCTAAGTATCTAAACAGCAAGTCTGCAACAATAGCAGCTGTTTGTTAAAGACTACGAAAAAGAAA i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1425200 23395 + 204313951 I a score=725116.000000 s hg38.chr17_GL383563v3_alt 22262 279 + 375691 TGGAggccgggcgtggttgttcacatctgtactccttgaattttgggaggctgaggcaggcagattgcctgaggtcaggagctc--cagaggagcctggccaacatggtgaaatcccatctctactaaaaatacaaaaattagctgggtatggtggcgggcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccagaaggtgaaggttgcagtgagccaaaatcgcaccattgcactccagcctgggtgacaagagaaagac s panTro4.chr4 121844078 279 + 193495092 TGGAggctgggcgtggttgctcatatctgtactccttgaattttgggaggctgaggcaggcagattgcctgaggtcaggagctc--cagaggagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtatggtggcgggcgcctgtaatctcagctactcgggaggctgaggcaggagaattgcttgaacccagaaggtgaaggttacagtgagccaaaatcgcaccactgcactccagcctgggtgacaagagaaagac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8234712 279 - 23176937 TGGAggccaggcgtggttgctcacatctgtactccttgcattttgggaggctgaggcaggcagattgcctgaggtcaggagctc--cagaggagcctggccaacatggtgaaaccccatcactactaaaaatacaaaaattagctgggtgtggtgacgggtgcctgtaatcccagctactcgggaggctgaggcaggaaaattgcttgaacccagaaagtgaaggttgcagtgagccaaaatcgtaccattgcactccagcctgggtgacaagagaaagac i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46801190 272 - 99891981 TGGAGTCCCAGAgtggtggctcatgtctgtaatccctgcactttgggaggctgaggcaggcagatcacttgaattcaggagttc--gagaagagcctggccaacatggtgaaaccccatctctact--aaatacaaaaatcatctgggca-----gtgggcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccagaaggcaagggttgcagtgagccaaaatcgcaccattgcactccaggctgggcgacaagagcaagac i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59781020 278 + 198365852 TGGAggctgggcgtggtggctcatgcctgtaatccctgcactttgggaggctgaggcaggcagatcacctgaggtcaggagttc--aagaccagcctggccaacatggtgaaaccccatctctattaaaaatacaaaaattagatgggtgtggtggc-ggcccccttaatctcagctactcaggaggctgaggcctgagaattgcttgaacccagaaggcggaggttgcagtgaggcaaaatcgcgccattgcactccagcctaggcgacaaaagcaagac i rheMac3.chr3 C 0 I 21 s macFas5.chr3 127699148 281 - 192294377 TGGAggccggccatggtggttcacatctgcaatccctgcactttgggaggctgaggcaggcagatcaactgaggtcaggagtccgagagacgagcctggccaacatggtgaaaccccgtctctactacaaatacaaaaattagctgggtgtggtggcgggcacccataatcccagctactcgggaggctgaggcaggagaactgcttgaacccagaaggcaagggttacagtgagctaaaatcgcaccattgcactccagcctgggcgacaagagcaagac i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 43132 278 - 317753 tggaggccGGGCATgttgactcacgtctgtaatccctgcactttgggaggctgaggcaggcagatcacctgaggtcaggagctt--gagacaagcctggccaacatggtgaaaccctgtctccactaaaaatacaaaaattagcagggtgtggtggcaggcacctgcaatctcagctacttgggaggctgaggcaggagaattgcctgaacccagaacGCAAATGTTGCAGCCAGcc-aaatcgcaccattgcactccagcctaggtgacaacagcaagac i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124155984 279 - 127223203 TGGAggccggccatggtggctcacatctgcaatccctgcacttttggaggctgaggcaggcagatcacctgaggtcaggagtcc--aagatgagcctggccaacatggtgaaactgtgtctctactaaaaatacaaaaattagctgggtgtggtggcgggcacccataatcccagctactcgggaggctgaggcaggagaactgcttgaacccagaaggcaagggttacagtgagctaaaatcgcatcattgcactccagcctgggcgacaagagcaagac i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1448595 279 + 204313951 TCTCAgccaggtacagtggcttatacctttaatccaagcactttgggagtccaaggcaggcaaataaccagaggtcaggagttc--aagaacatcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcacacacctgtaatcccagctactccagaggctgaggcaggagaatcgcttgaacccaggaggcagaatttgcagtgaccagagatcatgccattgtactccaggatgggcaacaagagcaaaac i calJac3.chr2 I 23395 C 0 a score=9591.000000 s hg38.chr17_GL383563v3_alt 22541 10 + 375691 tcttatctt--a s panTro4.chr4 121844357 10 + 193495092 tcttatctt--a i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8234991 11 - 23176937 tc-tatcttaaa i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46801462 8 - 99891981 tc-catctt--- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127699429 9 - 192294377 tc-tatctt--a i macFas5.chr3 C 0 I 1 s papAnu2.JH684865 43410 9 - 317753 tc-tatctt--a i papAnu2.JH684865 C 0 M 50 s chlSab2.chr21 124156263 9 - 127223203 tc-tatctt--a i chlSab2.chr21 C 0 I 3 s calJac3.chr2 1448874 9 + 204313951 tc-catctc--a i calJac3.chr2 C 0 C 0 e rheMac3.chr3 59781298 21 + 198365852 I a score=22726.000000 s hg38.chr17_GL383563v3_alt 22551 17 + 375691 aaaaaaaaaagaaaaaa s panTro4.chr4 121844367 17 + 193495092 aaaaagaaaagaaaaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8235002 17 - 23176937 aaaaaaaaaagaaaaaa i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46801470 14 - 99891981 ---aaaaaaaaaaaaaa i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127699439 17 - 192294377 acaaaaaaaaagaaaaa i macFas5.chr3 I 1 C 0 s chlSab2.chr21 124156275 17 - 127223203 aaaaaaaaaaagaaaaa i chlSab2.chr21 I 3 C 0 s calJac3.chr2 1448883 17 + 204313951 gaaaaaaaataaaataa i calJac3.chr2 C 0 T 22649 e papAnu2.JH684865 43419 50 - 317753 M e rheMac3.chr3 59781298 21 + 198365852 I a score=10535.000000 s hg38.chr17_GL383563v3_alt 22568 8 + 375691 aagaaaTG s panTro4.chr4 121844384 8 + 193495092 aagaaaTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8235019 8 - 23176937 aagaaaTG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46801484 8 - 99891981 aaaaaaTG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127699456 8 - 192294377 aagaaaTG i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124156292 8 - 127223203 aagaaaTG i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1448900 22649 + 204313951 T e papAnu2.JH684865 43419 50 - 317753 M e rheMac3.chr3 59781298 21 + 198365852 I a score=105783.000000 s hg38.chr17_GL383563v3_alt 22576 66 + 375691 GCATCTTCTTCAAGAATTACATCGTGTTTCATGATAAAGAAGCTCTAATTTTGCATTTGTTCAAGT s panTro4.chr4 121844392 66 + 193495092 GCATCTTCTTCAAGAATTACATCGTGTTTCATGATAAAGAAGCTCTAATTTTGCATTTGTTCAAGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8235027 62 - 23176937 GCATCTTCTTCAAGAATTACATTGTGTTTCATGAT----AAGCTCTAATTTTGCATTTGTTTAAGT i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46801492 66 - 99891981 GCATCTTCTTAAAGAATGACATCGTGTTTCATGATAAAGAAGCTCTAATTTTGCGTTTGTTCAAGT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59781319 66 + 198365852 GCATCTTTTTCAAGAATGACATAGTGTTTCATGATAAAGAAGCCTTAATTTTGCATTTGTTCAAGT i rheMac3.chr3 I 21 C 0 s macFas5.chr3 127699464 63 - 192294377 GCATCTTCTTCAAGAATGACATAGTTTTTCATGATA---AAGCTCTAATTTTGCATTTGTTCAAGT i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124156300 63 - 127223203 GCATCTTCTTCAAGAATGACATAGTTTTTCATGATA---AAGCTCTAATTTTGCATTTGTTCAAGT i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1448900 22649 + 204313951 T e papAnu2.JH684865 43419 50 - 317753 M a score=552212.000000 s hg38.chr17_GL383563v3_alt 22642 257 + 375691 ATTGATGAGATTTACCCAATATGACACCCATCTTGGATAAAATGCAAACAACACAATTTCATTTTCTCATTAA-CAAAACCGATTAAGTAGTCTAATATAAATTCCGATCTTATT-AAAAACTGATCAGATTAAAAAAATTATGGaattatggagccaataagatgttacaacctgttccaaggggaattccaaaatccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATATTGAAAAATAA s panTro4.chr4 121844458 257 + 193495092 ATTGATGAGATGTAGCCAATATGACACCCATCTTGGATAAAATGCAAACAACCCAATTTCATTTTCTCATTAA-CAAAACCGATTAAGTAGTCTAATATCAATTCTGATCTTATT-AAAAACTGATCAGATTTTTAAAAATATGGaattatggagccaataagatgttacaacctgttccaaggggaattccaaaatccacacgtatctgagaccatcaagtatgatgaaatgtatttgATTACTATATTGAAAAATAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8235089 257 - 23176937 ATTGATGAGATTTAGCCAATATGACACCCAACTTGGATAAAATGCAAACAACACAATTTCATTTTCTCATTAA-CAAAACTAATTAGGTAGTCTAATATCAACTCTGATCTTATT-AAAAACTGATCAGATTTTAAAAATTATGGaattatggagccaataagatgttacaacctgttccaaggggaattccaaaatccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATATTGAAAAATAA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46801558 256 - 99891981 ATTGATTAGATTTAGCCAATATGACATCAATCTTGGATAAGGTGCAAACAACACAGTTTCATTTTCTTATTA---AAAACTGATTAGGTAGTCTAATATCAATTCTGACCTTATTAAAAAACTGATCAGATTAAAAAAATTATGGaatgatggagccaataagatgttacaacctgttccaaggggaattccaaaacccacacatatttgagaccatcaaacatgatgaaatatatttgATTACTATATTGAAAAATAA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59781385 257 + 198365852 ATTGATTCGATTTAGCAAATATGACAACAGACTTGGATAAAGTGCGAACAACACAATTTCATTTTCTCCTTAATCAAAACTGATTAGGTAGTCTAATATCAATTCTGATCTTATT-AAAAACTGATAAGA-TAAAAAAATTAGGGaatgatggagccaataagatgttacaacctgttccaaggaggattccaaaacccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATATTTAAAAATAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127699527 258 - 192294377 ATTGATTAGAATTACCCAATATGACACCAATCTTGGATAAAGTGCAAACAACATAATTTCATTTTCTCAATAATCAAAACTGACGAGGTAGTCTAATATCAATTCTGATCTTATT-AAACACGGATCAGATTTTAAAAATAATGGaatgatggagcaaataagatgttacaacctgttccaaggggaattccaaaacccacacatatctgagaccatcaagtatgatgaaatatatttgATTACTATACTGAAAAATAA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 43469 250 - 317753 ATTGATTAGATTTACCCAACATGACACCAATCTTGGATAAAGTGCAAACAACacaatttcattttctcaataaTCAAAACTGACTAGGTAGTCTAATATCAATTCTGATCTTATT-CAAAACTGATCAGA-TTAAAAAATTACGGAATGATGGAGCAAATAAGATGTTACAACCTGTTCCAAGGGGAATTCCAAAATCCACACATATCTGAGACC-------ACGACGAAATATATTTAATTACTGTATTGAAAAATAA i papAnu2.JH684865 M 50 C 0 s chlSab2.chr21 124156363 258 - 127223203 ATTGATTAGAATTACCCAATATGACACCAATCTTGGATAAAGTGCAAACAACACAATTTCATTTTCTCAATAATCAAAACTGACGAGGCAGTCTAATATCAATTCTGATCTTATt-aaacacggatcagattttaaaaataatggaatgatggagcaaataagatgttacaacctgttccaaggggaattccaaaacccacgcatatctgagaccatcaagtatgatgaaatatatttgATTACTATACTGAAAAATAA i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1448900 22649 + 204313951 T a score=2783101.000000 s hg38.chr17_GL383563v3_alt 22899 1131 + 375691 ACTGATTACATAGCC---AACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAACTGTATGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGA--------------TTTCAtttgtatttgtattttgagacagggtcccactctgtcacccaggatggagtgcagtggtataatcatagctcactgcaaccttgaccaactgggctcaagagatgctcctgcctcagctgcccccatacctgggaatacaggcaagtaccaccatgtcaggca-tttt---------tttc--------a-----tttttgtagagagagaagacttgctatgttgcccaagctggcctcaaactcctagaatc-aagagatctgcccatctcagccacatgagtaactggggccataggtacataccatcatgcctggctatatttattttattttattaa---atttATttttttta-----tttttgtagagaggag--gtcttgctgtgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgtacctggccTGACTTGGGA--TTTCTTTTATCTAGCA-TCCTTTACTTGGTAGGATTGGGAAAAGCAGTAGTGTTTTTTAAAATTACTTAATAATTCAATCAGAATCAAACtcaaccttgaccactgccttctctcacagctcacatccagtctgtcaggaaatcctactgactgacttcaacatgtatccagg-------------------------------------------ctctaaccatctctcaccaccaccatgaaccccg---------------tcaggatcactatcatctcccaccgggatgttgccacagcttggcccccatgcttccacccaaatcttcccatagtctttctcaactcggcagccaggtc-gtgcttttaaatcaggagacggatcatgtcgcctctctgctcagaagc------------------ccttggtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcgtcccagggcttacacgatctgtaccgatcccagcccagcaactccctggcctcctcgctgacttcgctccctctatctctttgctccactggcctccttccagagcctcagacacaccagagagtttcctcct s panTro4.chr4 121844715 1130 + 193495092 ACTGATTACATAGCC---AACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTATGTGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGA--------------TTTCAtttgtatttgtattttgagacagggtcccactctgtcacccaggatggagtgcagtggtataatcatagctcactgcaaccttgaccaactgggctcaagagatgctcctgcctcagctgcccccatacctgggaatacaggcaagtaccaccatgtcaggca-tttt---------tttc--------a-----tttttgtagagagagaagtcttgctatgttgcccaagctggcctcaaactcctagaatc-aagagatctgcccatctcagccacatgagtaactggggccataggtacataccatcatgcctggctatatttattttattttattaa---atttaTttttttta-----tttttgtagagaggag--gtcttgctgtgttgcccaggctgctcccaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgcacctggccTAATTTGAGA--TTTCTTTTATCTAGCA-TCCTTTACTTGGTAGGATTGGGAAAGGCAGTAGTGTTTTTTAAAATTACTTAATAATTCAATCAGAATCAAACtcaaccttgaccactgccttctctcacagctcacatccagtctgtcaggaaatcctactgactgacttcaacatgtatccagg-------------------------------------------ctctgaccatctctcaccaccaccgtgaacccgg---------------tcaggatcacta-catctcccagcgggatgttgccacagcttggcccccatgcttctacccaaatcttcccatagtctttctcaacttggcagccaggtc-atgcttttaaatcaggagacagatcacgtcgcctctctgctcagaagc------------------cctcggtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcgtcccagggcttacacgatctgtaccgatcccagcccagcaactccctggcctcctcgctgacttcgctccctccatctctttgctccactggcctccttccagagcctcagacacaccagagagtttcctcct i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8235346 1134 - 23176937 ACTGATTACAAAGCC---GACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTACGTGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGA--------------TTTCATGTGTATTTGTAttttgagacagggtcccactctgtcacccaggatggagtgcagttgtataatcatagctcactgcaaccttgaccaactgggctcaagagatgttcctgcctcagctgcccccatacctgggaatacaggcaagtaccaccatgtcaggcattttt---------tttc--------a-----tttttgtagagagagaagtcttgctatgttgcccaagctggcctcaaactcctagaatc-aagagatctgcccatctcagccacatgagtaactggggccataggtacataccatcatgtctggctatatttatttttttaaatttatttatttatttatttt------tttttttagagaggag--gtcttgctatgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgcacctggccCGACTTGAGA--TTTCTTTTATCTAGCA-TCCTTTACTTGGTAGGATTGGGAAAGGCAGTAGTGTTTTTTAAAATTACTTAATAATTCAATTAGAATCAAACtcaaccttgaccactaccttctctcacagctcacatccagtccatcaggaaatcctactgactgacttcaacatgtatccatg-------------------------------------------ctctgaccatctctcaccaccaccgtgaacccgg---------------gcaggatcactatcatctcccaccgggatgttgccacagcttggcccccacgcttctacccaaatcttcccatagtctttctcaacttggcagccaggtc-gtgcttttaaatcaggagacagaccatgtcgcctctctgctcagaagc------------------cctcggtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcatcccagggcttacacaatctgtaccaatcccagcccagtaactccctggcctccttgctgactttgctccctctatctctttgctccactggcctccttccagagcctcagacacaccagagagtttcctcct i ponAbe2.chr4_random C 0 I 17 s nomLeu3.chr17 46801814 1130 - 99891981 ACTGATTATATAGCCAATAACAATTGGACAGGGGTCTCCTCATCCACAGCCACACAAACCCGATCATGCAGCTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGAGATTTCG---------TTTCAtttgtatttgtattttgagacagggtcccactctgtcacccaggatggagtgcaatggtataatcatagctcactgcagccttgaccaactgggcttaagagatgctcctgcctcagccgacccaatacctgggaatatgggcaagtactaccatgtcaggca-tttt---------ttttttttttcaa-----tttttgtag-------agtcttgatatgttgcccaagctggcctcaaactcctagaatcaaagagatctgcccatctcagcctcctgagtaactggggccataggtaca---catcatgcctggcTATATTTATTTT-----ATTAA---Atttatttctttta-----tttttgtaga---gcg--gtcttgctatgttacccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagacactgcacctggccTGACTTGAGA--TTTCTTTTATCTAGCA-TCCTTTACTTGGTAGGACTGGGAAAGGCAGTAGTGTTTTTAAAAATTACTTAATAATTCAATTAGAATCAAACtcaaccttgacccctgccttctctcaccgctcacatccagtctgtcaggaaatcctactgactgacttcaatatgtatccagg-------------------------------------------ctctgaccatctctcaccaccaccgtgcacccgg---------------tcaggatcaatatcctctcccaccgggatgttgccacagcttggcccccatgcttctacccaaatcttcccacagtctttctcaacttggcagccagggt-gtgcttttaaatcaggagacagatcgtattgcctctctgcacagaacc------------------tctcggtgattcccattttagtcagagtaaaagcgaaagcc------ccagcaacagtgtcccagggcttacacgatctgtaccgatcccagcccagctactccctggcctcctcgccgacttcgctccctctatctctttgctccactggcctccttccagagcctcagacacaccagggaatttcctcct i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59781642 1070 + 198365852 ACTGATTATATAGCCAATAACAATTGGGCAGGGGTCTCCTCATCCACAGCCACACA---------ATGCGGCTCTGCGGTTGCAAGGCCTGCATAGCCTAGAAGGGACTGCTCTGACTTAAAATTTCA---------CTTCATTCATAtttgtattttgagacagggtcctgctctgtcacccaggctggagtgcagtggtataatcatagatcactacagctttgaccaactaggctcaagagatcatcctgcctcagctgcaccagtacctgggaatacaggcaagtatcaccatatcaggct-tttaaaa------aaaa--------a-----attttatagagagagaagtcttgctatg-------agctggcctcaaactcctagcctc-aagagatctgcccacctcagcctcctgagtaactggggccataggtacacactaccatgcccagctatatttattttattttattaa---atttCttt-tttca-----tttttgtagagaggag--gtcttactatgttg-gaaggctgttctcgaactcatggccttgaaatatacgcccatctctgcctctcaaactgttggaactataagtgtgagccactgcacctggccTGACTTGAGA--TTTCTTTAATCTAGCA-TCCTTTACTTGGTAGGATTGGGAAAGGCAGCAGTGTTTTTTAAAATTACTTAATAATTCAATTAGAACCAAACtcaaccttgactcctgccttctctcgcagttcatatccagtctgtcaggaaatcctattgactgact------------------------------------------------------------------------------------------------------------------------tcatcttccacctgaatattgccacactttagaccccctgcttctacccaaatcttcccacagtctttctcaactcagcagccagggaggtgc---------aggaaaaagatcacgttgcttctctgctgagaaccgccccaccccacccccaacccccacggttcccatttcggtcagagtaaaagccaaagcc------ccagcaatagcct-ccagtgcttacacgatctgtactgatcccagcccagcaactccctgg-ctcctcccctacttctctctctgtatctctttgcccctctggcctccttccagagcctcagacacaccagggagtttcctcct i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127699785 1129 - 192294377 ACTGATTATAAAGCCAACAACAATTGGGCAGGGGTCTCCT-ATCCACAGCCACACAAACCCGATCATGCCACTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGGGATTTCA---------TTTCATTTGTATTTATAttttgagacagggtcccactgtgtcacccaggatggagtgcagtggtataatcatagctcactgcagccttgaccaagtgggctcaagagatgctcctgcttcagctgccccaatacctggaaatacaggcaagtaccaccatgtcaggct-tttaaaaattattatta--------a-----tttttttagagagagaagtcttaatatgtggcccaagctggcctcaaactcctagcctc-aagagatctgcccacctcaacctccTGAG------------TAGGTACACACCACCATTCCCGGCTATATTTATTTTATTTTATTAA---ATTTCTTTCtttta-----tttttgtagagaggag--gccttgctacgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagccactgcccctggccTGACTTGGGA--TTTTTTAAATCTACAT-TCCTTTACTTGGTAGGATTGCAAAAGGCAGTAGGGTTTTTT----TTAATCAATAATTTAATTAGAATCAAACtcaaccttgactcctgctttctctcgcagctcacatccagtctgtcaggaaatcctattgactgacttcaacatgaatccatg-------------------------------------------ctctgaccatctctcactaccactgtgcaccagg---------------tcaggaccactatcatctcgcactgggatgttgccacagcttggcccccatgcttctacacaaatcttcccagagtctttctcaacttggcagccagggc-gtgc-tttaaattaggagacagatcatgtcgcctctctgctcagaacc------------------cctcggtggttcccattttagtcagagtaaaa-ccaaagcc------ccagcaatagcatcccagggcttacgcgatctgtaccaatcccagcccagcaactccctggcctcctcgccaactttgctccctctttctctttgctccactgacctccttccagagcttcagacacaccagggagtttcctcct i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 43719 1124 - 317753 ACTGATTACATAGCCAACGACAATCAGGCAGGGGTCTCCTCATCCATAGCCACACAAACCCGATCATGCCACTATGTGGTTACAAGGCCTACATAGCCTAGAAGGGACTGGTCTGACTTGagatttc--------------------atttgcattttgagACAGCAtcccactgtgtcacccaggatggagtgcagtggtataatcatagctcactgtagtcttgatcacctgggctcaagagatgttcctgcctcagccgccccaatacctgggaatacaggcaagtaccaccatgtcaggct-ttttaaa------aaat--------t-----tttttgcagagagagaagtcttgctatgttgcccaagctggcctcaaactcctagcctc-aagagatctgcccacctcagcctcttgagtaactggggcCATGGgtacgcatcaccatgcccggctatatttattttattttattaa---atttc----tttta-----tttttgtagagaggag--gtcttgctatgttgcccaggctgctctcaaactcatggccttaAAACATactcccatctctgtctctcaaactgttggaactataggtgtgagccactgacccTGACCtgacttgggattttttttttatccagca-TCCTTTACTTGGTAGGATTGGGAAAGGCagtagggttttta----aaaattaataattcaattAGAATCAAACTCAACCTTGACCCCTGCCTTCCCTCACAGCTCACATCCAGTCTGTCAGGAAATCCTATTTACTGACTTCAACATGTATCCAGG-------------------------------------------CTCTGACCATCTCTCACCACCACCATGCACTCGG---------------TCAAGACCACTATCATCTCCCATCGGGATGTTGCCACAGCTTGGCCCCCGTGATTCTACCCAAATCTTCCCAGAGTCTTTCTCAACTTGGCAGCCAGGGC-ATGCTTTTAAATCAGGAGACAGATCATGTCGCCTCTCTGTTCAGAACC------------------CCTCGGTGGTT-CCATTTTAGTCAGAGTCAAAGCCAAAGCC------CCAGCAATAGCATCCCAGGGCTTACGTGATCTGTACTGATTCCAGCCCAGCAACTCCCTGGTCTCCTCGCTGACTTCACTTCCTCTATCCCTTTGCTCCACTGGCCTCTTTCCAGAGCCTCAGACACACCAGGGAGTTTCCTCCT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124156621 1130 - 127223203 ACTGATTATAAAGCCAACAACAATTGGGCAGGGGTCTCCT-ATCCACAGCCACACAAACCCGATTATGCCACTATGTGGTTGCAAGGCCTACATAGCCTAGAAGGAACTGGTCTGACGTGGGatttca---------tttcatttgtatctatattttgagacagggtcccactgtgtcacccaggatggagtgcagtggtataatcatagctcactgcagccttgaccaactgggctcaagagatgctcctgcttcagctgccccaatacctggaaatacaggcaagtaccaccatgtcaggct-ttttaaaattattatta--------a-----tttttttagagagagaagtcttaatatgtggcccaagctggcctcaaactcctagcctc-aagagatctgcccacctcagcctcctgag------------taggtatacaccaccatgcccggctatatttattttattttattaa---atttCTTTCtttta-----tttttgtagagaggag--gtcttactatgttgcccaggctgctctcaaactcatggccttaaaacatactcccatctctgcctctcaaactgttggaactataggtgtgagctactgcccctggccTGACTTGGGA--TTTTTTTAATCTAGCATTCCTTTACTTGGTAGGATTGCGAAAGGCAGTAGGGTTTTT-----TTAATTAATAATTTAATTAGAATCAAACtcaaccttgacccctgccttctctcacagctcacatccagtctgtcaggaaatcctattgactgacttcaacatgcatccagg-------------------------------------------ctctgaccatctctcactaccaccgtgcaccagg---------------tcaggaccactatcatctctcactgggatgttgccacagcttggcccccatgcttctacacaaatcttcccagagtctttctcaacttggcagccagggc-gtgc-tttaaatcaggagacagatcatgtcgcctctctgctcagaacc------------------cctcggtggttcccattttagtcagagtaaaagccaaagcc------ccagcaatagcgtcccagggcttacacgatctgtaccgatcccagcccagcaactccctggcctcctcgccaacttcgctccctctctctctttgctccactgacctccttccagagcttcagacacaccagggagtttccttct i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1426251 1179 + 204313951 ACTGATTAGTCAGGGAACAAC-ACTGGGCAGGGGTCTCCTCATTCCCAGTGACAAAAACCCCACTGCACCACTCCGGGGTTGCAAGGGCTGCAGAGCCAAAAG------GCTCTGACTTGAGATTTCATTATTTTTCTTGTAtttctatttgtattgtgagacaaggtcctgc--tgtcacccaggctggagtgcagttgtgcacttatagctcactgcagcctcaaccttgtgggatcaagccatcttcctgcctcagct-ccccagtg-ctggtcctatagttgagtgccaccatacctggct-attt---------tttt--------aaaaattttttgtagagtgaggagtcttgctatgttgcccattttggcttcaaactcctgacctc-aagacatctgctcacctcaacctcctgagtagctgggactacaaatacacatcaccatgcctagcT-TATTTATTTTATTTTCTTTA---AT-------TTTGAAAAATAttttgtagaggggaaatatattcttatgttgcccaggctgttctcaaactcctgcttttaaacggtactcccatctctgctttccaaacagctgggactacaggcataagccactgcacTGCGCCTAAA--GAGA--TTTCTTTAATCTAGCA-TCCCATTCTTGGTAAGATTGGGAAAGGCAGTAGTGTTTTAAAAAATTACTTAATAATTCAATaaaactgaaacctagctttgacccctgc-ttctctcacaccccacatccagtctgtcaggaaatcctattgactgtgttcaccgtgtactgaagatccccacccggcagctccctggcctcctcctctatttctctcctccgaccatctctcaccaccgccgttaccctggtcaggaccactgtcatcaggaccactatcatctcccacc----tgttgtcacagcttggcccccatccttctacccaaatcttcccacagtctttctcaactcagcagccagaga-gtgcttttcaattgagggacagatcatattgcctttctgctcagaacc------------------ctcctgcagatcccatc----tctgagtaaaagccaacgcccctctgccagcagtaacctcccagggcttacaggatctctactgatccctgtccagcaactccctggcctcctctccaaagtctctccctctgtcc---tgctccactggcctcccttcagagcctcagacacacctga------------ i calJac3.chr2 T 22649 C 0 a score=12271.000000 s hg38.chr17_GL383563v3_alt 24030 8 + 375691 aatgcctt s panTro4.chr4 121845845 8 + 193495092 aatgcctt i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46802944 8 - 99891981 aatgcctt i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59782712 8 + 198365852 aatgcctt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127700914 8 - 192294377 aatgcctt i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 44843 8 - 317753 AATGCCTT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124157751 8 - 127223203 aatgcctt i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1427430 3 + 204313951 --cac--- i calJac3.chr2 C 0 C 0 e ponAbe2.chr4_random 8236480 17 - 23176937 I a score=871067.000000 s hg38.chr17_GL383563v3_alt 24038 308 + 375691 tatcctgttgactcagcctacaatgctcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaatattcacttatgaggccaaccctgaccactctacttaacactgccatctgtccccattcccaccatgctcAtttatttctttct--------------------------------------------------ttttgaaacaaggtcttgctttattgcccaggctggagtacactggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaatcctcccgcctcagccaccctaggaactgagactacagctgcatgccacaacac s panTro4.chr4 121845853 308 + 193495092 tatcctgttgactcagcctacaatgctcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaatattcacttataaggccaaccctgaccactctacttaacactgccatctgtccccattcccactatgctcAtttctttctttct--------------------------------------------------ttttgaaacaaggtcttgctttattgcccaggctggagtacactggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaatcctcccgcctcagccaccctaggaactgagactacagctgcatgccacaacac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8236497 308 - 23176937 gaccctgttgactcagcctacaatgctcttccctcagcaccttggccagctccatcacctgcttcaaacttttgctcaatattcacttatgaggccaaccctgaccactctacttaacattgtcatctgtccccattcccaccatgctcAtttctttctttct--------------------------------------------------ttttgaaacaaggtcttgctttattgcccaggctggagtacattggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaatcctcccgcctcagcctccctaggaactgagactacagctgcatgccagaacac i ponAbe2.chr4_random I 17 C 0 s nomLeu3.chr17 46802952 308 - 99891981 tatcctgttgactcagcctacaatgctcttccctcagcactttggccagctccatcatctgcttcaaacttttgctcaatattcacttatgaggccaaccctgaccactctgcttaacactgccatctgtccccattcccaccatgctcAtttctttctttct--------------------------------------------------ttttgaaacaaggtcttgctctattgcccaggctggagtacagtggtgcaatcacagctcacagcaacttcaacctcccaggcttaaacaattctcccacctcagcttccctaggaactgagactacagctgcatgccacaacac i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59782720 358 + 198365852 tatcctgttgactcagcctacagtgctcttctctcagcaccttggccagctccatcgcctgcttcaaacttttgctcaattttcacttatgaggccaaccctgaccactctacttaacattgccatctgtccccattcccaccatgctcctttctttctttttctttttctttctctttctccTTCCtttcctttcctttccttctttctttcttttctgacagggtcttgctctattgcccaggttgaagtacagtggtgcaatcccagctcacagcaacctcaaccccttaggcttaaacaatcctccaggctcagttaccctaggagctgagactacaggtgcatgccacaacac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127700922 308 - 192294377 tatcctgttgactcaggctacgatgctcttccttcagcaccttggccagctccatcatctgcttcaaacttttgctcaatattcacttatgaggccaaccctgaccactctactcaacattgccatttgtccccattcccatcatgctcAtttctttctttct--------------------------------------------------ttttgaaacaaggtcttgctctattgcccaggctggagtacagtggtgcaatcatagctcacagcaacctcaacctcccgggcttaaacaatcctcccgcctcagcctccctaggaactgagactacagctgcatgcaacaacac i macFas5.chr3 C 0 I 2688 s papAnu2.JH684865 44851 308 - 317753 TATCCTGTTGACTCAGCCTACAATGCTCTTCCTTCAGCACCTTGGCCAGCTCCATCACCTGCTTCAAACTTTTGCTCAATATTCACTTATGAGGCCAACCCTGATCACTCTACTTAACATTGCCATTTGTCCCCATTCCCACCatgctcatttctttctttct--------------------------------------------------ttttgaaacaaggtcttgctttattgctcaggctgaagtacagtggtgcaatcacagcttacagcaacctcaatctcccaggtttaaacaatcctcccgcctcagcctccctaggaactgagactacagctgcatgccacaacac i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124157759 308 - 127223203 tatcctgttgactcagcctacagtgctcttccctcagcaccttggccagctccatcatctgcttcaaacttttgctcaatattcacttaggaggccaaccctgaccactctactcaacattgccatttgtccccattcccaccaTGCTCAtttctttctttct--------------------------------------------------ttttgaaacaaggtcttgctctattgcccaggctggagtacagtggtgcaatcatagctcacagcaacctcaacctcccaggcttaaacaatcctcctgcctcagcctccctaggaactgagactacagctgcatgcaacaacac i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1427433 320 + 204313951 tattctgtggtttctgcctacaatgctcgtccctcagcaccttggccagctccttcccctccttcaagtctttgct--gttttcacttaggaggccaccc-----cattctatttaacactaccatctgtgcccattactaccACATTCACTTCTTTCtttctctctttttttttcttttgt-------------------------------tttggagagaagatctcactctgtcaccaaggctggagtggagtggtgcaatcacagctcactgcaacctcaaattcccaggctcaagcaatcctcccacctcagccttcctagtagctgaagctataggtgcatgccatcatgc i calJac3.chr2 C 0 C 0 a score=1953239.000000 s hg38.chr17_GL383563v3_alt 24346 1008 + 375691 atggc----ttttttttttttt---------------ttttttttgagacggagtcttg----gtc-----gcccaggctgaagtgtaagggtgcgatcttggctcactgcaatgtctgccttttgggttcaagtgattct-ct------gcctcccaagtagctgggattacaggcacccaccaccacacctggctaatgtttgtatttttagtagagatggggtttcaccatcttggctaggctggtct-tgaacttctgacctc--gtgatccaccct-cctcggcctccc-aaagtgctgggattacaggcgtgagccactgcgcctggcctttaaaaaaatttttttttagacatgaggtctcattatgttgcccaggctggtcttaagctcctgggcttaagcgatcctcccacctcagcctcctaaagttctgggattacaggcgtgagcaactgTAACATGAGGTCCCAGCTTCAtgttcatt-ttttgttgttgctacaacaaagtaccctacatttagtggcatcaaacaccacaaatctaccatcttacagttctgggggccagaagccc-aactaggtctatcaaggctaaagtcaaggtgtcagagaggctgcattccttctgggggaggctctagacagaatgtgctcctttgccttttccagcttctagaagccacctccattcct--tgacttacctcg-----------tgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccattaccacatcactttctctaattctgactctcctacctca----ttctcttataaagatccttgtgattGGTgggtatgggggctcccatctgtaatcccaacattttgggaggccaaagaggaaggattgcttgaggccaagagttagagatcagcctggggaaaataggaaga-tcctgcctttacaaaat--taaaat------cagctggacatggtgatgcatgcctgtagttccagctactggagaggctaaggtgggaggattgctttagcctaggagg s panTro4.chr4 121846161 1002 + 193495092 atggc----tttttttttttt------------------------gagatggagtctcg----gtc-----gcccaggctgaagtgtaagggtgcgatcttggctcactgcaatgtctgccttttgggttcaagtgattct-ct------gcctcccgaatagctgggattacaggcacccaccaccacacctggctaatgtttgtatttttaggagagatggggtttcaccatcttggctaggctggtct-tgaacttctgacctc--gtgatccaccct-cctcggcctccc-aaagtgctgggattacaggcgtgagccactgcgcctggcctttaaaaaaaattttttttagacatgaggtctcattatgttgcccaggctggtcttaagctcctgggcttaagcgatcctcccacctcagcctcctaaagttctgggattacaggcgtgagcaactgTAACATGAGGTCCCAGCTTCATGTTCAtt-ttttgttgttgctacaacaaagtaccctacatttagtggcatcaaacaccacaaatctaccatcttacagttctgggggccagaagccc-aactaggtctattaaggctaaagtcaaggtgtcagaggggctgcattccttctgggggaggctctagacagaatgtgctcctttgccttttccagcttctagaagccacccccattcct--tgacttacctcg-----------tgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccattaccacatcactttctctaattctgactctcctaccccc----ttctcttataaagatccttgtgattGGTgggtatggggcctcccatctgtaatcccaacattttgggaggccaaagaggaaggactgcttgaggccaagagttagagatcagcctggggaaaataggaaga-ccctgcctttacaaaat--taaaattaaaatcagctggacatggtgatgcacgcctgtagttccagctactggagaggctaaggtgggaggattgctttagcctagg--- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8236805 1018 - 23176937 ctggc----tttttttttttt-----------------tttttttgagatggagtttcg----gtc-----gcccaggctgaagtgtaagggtgcgatgtcggctcactgcaaggtctgccttttgggttcaagtgattct-ctgcctcagcctcctgagtagctgggattacaggcacccaccaccacacctggctaatgtttgtatttttagtagagatggggtttcaccatcttggctaggctggtct-tgaacttctgacctt--gtgatccaccct-cctcggcctccc-aaactgctgggattacaaatgtgagccactgagcctggccttttaaaaacattttttttagatatgaggtctcattacgttgcccaggctggtcttaagctcctggacttaagcgatcctcctacctcagcctcctaaaattctgggattacaggcgtcagcaactgTAACATGAGGTCCCAGCTTCACGTTCATT-TTTGGttgttgctacaacaaagtaccctacatttagtggcttcaaacaccacaaatctaccatcttacagttctgggggccagaagccc-aactaggtctattaaggctaaagtcaaggtgtcagaggggctgcattccttctgggggaggctctagacagaatgtgctcctttgccttttccagcttctagaagccacccccattcct--tgacttacctcg-----------tgactccatattcaaggccacaagtacagcatcttcaaatctccctctctgacctcttcttccattaccacatcactttctctaattctgactctcctacctcc----ttctcttataaagatccttgtgattGGTAggtatgggggctcccatctgtaatcccaacattttgggaggccaaagaggaaggattgcttgaggccaagagttagagatcagcctggggaaaataggaaga-ccctgtctttacaaaat--taaaattaaaatcagctggacatggtgatgcacgcctgtagttccagctaatggagaggctaaggtgggaggattgctttagcctaggagg i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46803260 1028 - 99891981 ctggc----taatttttttct----------------ttttttttgagacggagtttca----gtc-----gcccaggctgaagtgcaacagtgcaatctcagctcactgcagtgtctgcctttcgggttcaagtgattct-ctgcctcagcctcccgagtagctgggatta----cacccaccaccacacctggctgatttttgtgtttttagtagagatggggtttcaccatcttggccaggctggtct-tgaacttctgacctt--gtgatccaccca-cctcggcctccc-aaagtgctaggattacaaatgtgagccaccacgcccggcctttttaaaaaaatttttttagacatgaggtctcattatgttgcccaggctggtcttaagctcctgggctcaagcaatcctcttacctcagcctcctaaagtcctgggattacaggcatgagcaactgTAACATGAAGCCCTGGCTTtatgttcattatttacttgctgctacaacaaactaccctatatttagtggcttgaaacaccataaatctaccaccttacagttctaggggccagaagccc-aactagatctattaaggctaaagtcaaggtgtcagaggggcgacattccttct---ggagactctagatagaatgagcttctttgccttttccagcttctagaagccacccccattcct--tgactcaccctgaagatggcccctgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccatcaccacatctccttctctaattctgactctcctacctccttgtttctcttataaagatccctgtgattGGTgggcatgggggctcccatttgtaatcccaacactttgggaggccaaagaggaaggattgcttgaggccaagagttcaagatcagcctagggaacataggaaga-ccctgcctttacaaaat--taaaattaaaatctgctggacatggtgatgcacgcctgtagttccagctactggagaggctaaggtaggaggatcactttagcctaggagg i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59783078 990 + 198365852 ctggcaaatttttttttttttt--------------tttttttttttgagacagtcttactgtatc-----gcctaggctagagtgcaatggcgtgatcttggctcactgcaacctctgcctcctggattcaagtgattct-ctgcctcagcctcccgagtagctgggattacaggtgcccactaccacacccggctaatttttgtatttttagtagagacgcggtttcaccatctttgctaggctggtct-tgaactcctgacctc--gtgatccaccccaccttggcctccc-aaagtgctggcattacaggagtgaaccactgcacctggccttttctttaaaatttttgtagacatgaggtctcactatgttgcccaggctggtcttaagctcctgggcttgagcaatcttcccacctcagcctcccaaagttctgggattacaggtatgagcaaccgc---------ccctggcTTCATGTTCAtt-tcttcttgc-gctgcaacaaactaccctatgtttagtggcttaaaaccccacaaatctaccatcttacagttctgggggccagaagccc-aactaggtctattaaagctaaagacaaggtgtcagaggggc------------------------------------------tgccttttccagtttctagaagccacccccattctt--tgactcaccttaaagatggcccctgactccatctataaagccagaagtgcggcatcttcaaatctccctctctgacctctttttccatcaccacatcttcttctctaattctgactctcctacctc---ctttctcttataaatatccttgtgattGGTgggcgtgctggctcccacctgtaatcccaacactttgggagaccaaagatgaaggaatgcttgagaccaagagttcaagatcagcctgggcaacacagcaaga-ccttgtctttacaaaat--taaaattcaaatcagctgggcatggtgatgcatgcctgtagtcccagctactggagaggctaaggtgggaggattgctttagcctaggagg i rheMac3.chr3 C 0 C 0 s papAnu2.JH684865 45159 1031 - 317753 ctggc----tttttttattttt--------------attttttttgagacacagtctcg----gtc-----gcccaggctgaagtgcaatggcgcgatctcggctcactgcaatgtctgccttttgggttcaagtgattct-ctgactcagcttcccgagtagctgggattacaggcacccatcaccacacctggctgatttttgtatttttagtagagatggggtttcaccatcttggccaggctggtct-tgaacttctgacctt--gtgattcaccct-cctcagcctccc-aaactgcaggGATTACAAatgagagccaccacgcctagcctttaaaacaaatttttttaagacatgaggtctcattatgttgcccaggctagtcttaagctcctgggctcaagtgatcctcccacctcagcctcctaacatcctgggattataggtgtgagcaactgtAACATGAAGCTCTGGCttcatgttcatt-ttttcttgctgctacaacaaaataccctACATTTAGTGCTTTCAAACACCATAAATCTACCATCTTACCATTCTGGGGGCCAGAAGCCC-AACTAGGTCTATTAAGGCTAAAGTC-AGGCGTCAGaggggctgcattccttct---ggaggctctagagagAATGTGctcccttgccttttccagcttctagaagccaccCCCAATCTT--TGACTCACATTGAAGATGGCCCCTGATGCCATATTCAAGGCCAGAAGtgcagcatcttcaaatctccctctctgacctcttcttccatcatcacatctccttctctaattctgactctcttacctccttctttctcttataaagatCCTTGTGATTGGTGGGCATGGgggctcccatctgtaatcccaacactttgggaggccaaagaggaagGAATGTTTGacgtcaagagtttgagatcagcctagggaacataggaaga-ccctgcctttacaaaat--taaaattaaaatcagctggacatggtgatgcacgcctgtagttccagctactggacAGGCTAAGGT-GGAGGATCGTGttagcctaggagg i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124158067 1022 - 127223203 ctatc----taatttttttttt--------------tttttttttgagacagaatctca----gtc-----atccaggctgaagtgtaacaacgctatctcggctcgctgca--gtctgcctttcaggttcaagtgattct-ctgcctcagcttcctgagtagctgggattacagg-------caccacacctggctaatttttgtatttttagtagagatggggtttcaccatcttggccaggctggtct-tgaacttctgacctc--atgatccaaccc-cctcagactcctaaaagtgctgggatcacaaatgtgagccaccgcgcccggcctttttaaaaaaacttttttagacatgaggtctcattatgttgcccaggctggtcttaagctcctgggctcaagcgatcctcctacctcagcctcccaaagtgctgggattacaggcatgagcaactgTAACATAAAGCCCCAGCTTCAtgttcatt-ttttcttgctgctacaacaaactaccctatatttagtggcttgaaacaccacaaatctaccaccttacagttctggggtccagaagccc-aactagatatattaaggctaaagtc-aggtgtcagaggggctgcattccttct---ggaggctctagagagaatgtgctccgttgtcttttccagcttctagaagcca-ccccattcct--tgactcatcttgaagatggcccctgactccatattcaaggccagaagtgcagcatcttcaaatctccctctctgacctcttcttccatcaccacatctccttctctaactctgactctcctacctccttctttctcttataaagatccttgtgattGGTgggcatgggggctcccatctgtaatcccaacactttgggaggccaaagagaaaggaatgcttgaggccaagagttcgagaccagtctggggaacacaggaaga-ccccgcctttacaaaat--taaaattaaaatcagatggacatggtgatgcacgcctgtagttccagctactagagaggctaaggt-ggaggatcgctttagcctaggagg i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1427753 1036 + 204313951 ctggc----ttattttttatttttaatttaatttagttttatttcaaaatggagtttca----ctcttcttgcttagcctggagtgcaatggtgcaatcccaggtcactgcaacctccacctcgtgggtttaagtgattctcctgccttggcctcccaagtagctgggattacaggtaagtgccaccatgcctggctaatttttgtatttttagtagaggtggggttttgccatgttggtcaggctgatctaaaaactcctgacctcaggtgatctaccct-cctcaacctccc-aaagagctgggattacaggagtgaggcactgtgcctggc----taatttaattttttgtagagacagggtctc-ctatgttgtccaggcttgtcttgaactcctggcctcaagtgttcctcctgcctgaa-ttcctaaagtgctgagattactgacatcggccaccat---------gcctggcTTCATGTTTAtt-tcttcttgctgctacaacaaactcccctacatttagccacttaaaacaccacaaatataccatcttacatttctgggggtcagaagcccaaacgaggtctattaaggctaaagtgaaggtgtcagcagggctgcattccttct---ggaggctctgaa------gtgttcccttggcttttctggcttctgaaagccaccccccctcctccctgcttttttggatcatggcccctgactccatcttcaaag--acaagtgaagcatcttcaaatctccctctctgatctctgcttccatcaccccattttctgctccaattctgattcttttaccctc---tttcttttataaggacctttgagattgctgcgcatggtggctttcatccataagcccaattctttgggaggtcaaggtaggaggaacgcttgaggcccagagtttgaaactagcatggacaacatagtgagacccccacctctaagaaagtataaaaaaaaaattagccagacatggcagtgagtgcctgtagtcccagctacttcagaggctgaggtgagatgattgctttagcccaggaAG i calJac3.chr2 C 0 I 1901 e macFas5.chr3 127701230 2688 - 192294377 I a score=1141745.000000 s hg38.chr17_GL383563v3_alt 25354 690 + 375691 tcaaggctgaagtgagctatgatcacatcactgcactccagcctcagtggcagagtgagactctgtctccgatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagagcttccaaagctcttataaagcccttcgtgacagaggtaataggagcattttctgttttgatatttagtcttagtcccaggttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctaacagggtggctgcaagctccgagactgcttcaggaggagggctagctgccagagaaagcaaccacatttttttttta----------aaacggagtttggctcttgtagcccaggctggagtgcaatggcacaatctcagctcactacaacctccacctcccgggttcaagcaattctcctgcctcggcctcccgagtagctgaaattatagggatgtgccacaacgcctagctaactgttgttatttttagtagaaacggggtttcaccatgttggtcaggctggtctcaaactcttgacctcaagtggtccatgtgcctcagccttccaaactgctaggattacaggagtgagccaccgcacctggccccaacaacattttttgaggcttggaactttcagcctcacctgctgaactcc s panTro4.chr4 121847163 692 + 193495092 tcaaggctgcagtgagctatgatcacatcactgcactccagcctcagtggcagagtgagactctgtctccaatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagagcttccaaagctcttataaagcccttcgtgacagaggtaataggcacattttctgttttgatatttagtcttagtcccaggttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctaacagggtggctgcaagctcctagactgcttcaggaggagggctagctgccagagaaagcaaccacattttttttttttt--------aaacggagtttggctcttgtagcccaggctggagtgcaatggcacaatctcagctcactacaacctccacctcccgggttcaagcaattctcctgcctcggcctcccgagtagctggaattatagggatgtgccacaatgcctagctaattgttgttatttttagtaggaacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaagtggtccatgtgcctcagccttccaaactgctaggattacaggagtgagccaccacacctggccccaaccacattttttgaggcttggaactttcagcctcacctgctgaattcc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8237823 683 - 23176937 tcaaggctgcagtgagctatgatcacatcactgcactccagcctcagtggcagagtgagactctgtctcaaatataagaaaagaaatatacatttggtctctgcccctggttcctggcacagagcttccaaagctcttaaaaagccctttgtgacagaggtaataggagcattttctgttttgatatttagtcttagtcccaggttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctaacagggtggctgcaagctcctagactgcttcaggaggagggctagcggccagagaaagcaaccgctttttttt--------------aaatggagtttggctcttgtagcccaagctggagtgcaatggcacaatctcagctcactgcaacctccacctcccgggttcaagcaattctcctgcctcggcctcccgagtagctggaattatagggatgtgccacaacttctagctaattgttgttatttttagtagaaacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaagtggtccatgtgcctcagccttccaaactgctaggattacaggagtgagccaccgcacctgg-cccaaccacattttttgaggcttg--agcttcagcctcacctgctgaactcc i ponAbe2.chr4_random C 0 I 276 s nomLeu3.chr17 46804288 701 - 99891981 tcaaggttgcagtgagctatgatcacatcactgcactccagccttggtggcagagtgagactctgtctcaaatataagaaaagaaatacacatttggtctctgcccctggttcctggcatagagcttctaaagctcttataaagtccctagtgacagaggtaataggagcactttctgttttaatatttagtcttagtcccacgttcctgacacaagggcctctaaggtctttcagatctgtagcgtctttcagatctgtagcatggtaagaatgcaagtgggatgctgttgagctgacagggtggctgaaagctcctagactgcttcaggaggagggctggctgccagaggaaccaaccacattttttttt------------aaatggagcttggctcttgtagccgaagctgg-----aacggcacaatctcagctcactgcaacctccacctcccacgttcaagcaattctcctgcctccgcctcctgagtagctggaattatagggatgcaccacaatgcccagctaatttttgttatttttagtagagacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcaagtgatccacatgcctcggcctcccaaagtgctaggattacaggcatgagccaccgcgcccggccccaaccacattttttgaggcttggaactttcatcctcacctgctgaactcc i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59784068 685 + 198365852 tcaaggctgcagtgagctatgatcacagcactgcactccagcctgggtgggagagtgagactctgtctcaaatataagaaaagaaatatatatttggtttttgcccc-ggttcctggcacaaagtttctaaagctcttataaagtccttagtgatataggtaataggagcatcttctgttttaatttttggtcttagtcccaggttcctgacacaagggcctctaag------------------ttctttcagatc-gcagcatggtaagaaagtatgtgggatgctgttgaaatgcctgggtggctggaagctcctagactgcttcaga---agggctggttgccagaggaatcaaccacatttttttttttt---------aaacggagtttggctctcatagcccaggctggagtgtaatgggacaatctcggttcactacaacctcaacctccgggcttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgcctagctaatttttg-tatttttagtagagatgggatttcttcatgttggtcaggctggtcttaaactcctgacttcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggcatgagccaccgtgcctgaccccaaccacattttttgaggcttggaaatttcagtctcacccactgagctcc i rheMac3.chr3 C 0 C 0 s papAnu2.JH684865 46190 699 - 317753 tcaaggctgcagtgagctatgatcacatcactgcactccagcctcagtggcagagtgagactctgtctcaaatataagaaaagaaatatatatttggtctctgcCCCTGGTTCCTGGCATAGAGCTTCTAAAGCTCTTATAAAGCCCTTAGTGACAAAGGTAATAGGAGCATTTTCTGTTTTGGTATTTAGTCTTAGTCCCAGGTTCCTGACACAAGAGCCTCTAAG------------------GGCTTTCAGATCTGCAGCATGGTAAGAATGCATGTGGGATGCTGTTGAACTGACAGAGTGGCTGCAAGCTCCTAGACTGCTTCAGAAGGAGGGCTGGCTGCCAGAGGAAGCagccgcattttttttttttttttttttgagacggagtctcgctct-gtcgcccaggctggagtgcaatggcacaatctcagctcactgcaacctccgcctcctgggttcaagcaattcttctgcctcagtctcctgagtagctggaattatagggaTGTGCCataacgcccagctaatttttgttatttttagtagagacggggtttcaccatgttggtcaggctgatctcaaactcctgacctcaaatgaatcacatgcctcggcctcccaaactgctaggattacaggcatgagctgccgcgcTCGGCCCCAACCACATTTTTTGAGGCTTGGAACTTTCAGCCTCACCTGCTGAACTCC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124159089 689 - 127223203 tcaaggctgcagtgagctgtgatcacatcaccatactccagcctcagtggcagagcgagactctgtctcaaatataagaaaagaaatatacatttggtctctgcccctggttcctggcatagaacttctaaagctcttatagagtccttagtgaccgaggtaacaggagcatttcctgttttaatatttagtcttagtcccagtttcctgacacaagggcctctaag------------------gtctttcagatctgcagcatggtaagaatgcatgtgggatgctgttgagctgacacagtggctgcaagctcccagactgcttcaggaggagggctggctgccagaggaaccaaccacatttattttttt----------aaacggagtttggctcttgtagcccaggctggagtgcaatggcacaatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctacctcggcctcctgagtaggtggaattatagggatgtgccacaacgcccagctaatttttg-tatttttagtagagatggggtttcaccatgttggtcaggctggtttcaaaatcctgacctcaagtgatccgcacgcctcggcctcccaaagtgctaggattacaggcatgagccactgcacccagcctcaaccacatttcttgaggcttgaaactttcagcctcacctgccgaactcc i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e macFas5.chr3 127701230 2688 - 192294377 I a score=103873.000000 s hg38.chr17_GL383563v3_alt 26044 92 + 375691 aggaggcaaaaggaactggagattgacttaactaccaatggccagtgattttatcaatcatgcctccataaacaccc-aaacagcagggtttg s panTro4.chr4 121847855 92 + 193495092 aggaggcaaaaggaactggagattgacttaactaccaatggccaatgattttatcaatcatgcctccataaacaccc-aaacagcagggtttg i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46804989 84 - 99891981 aggaggcaaaagggattggagactgacttaactaccaatggcca--------atcaatcatgcctccataaaaactc-aaataacggggtttg i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59784753 93 + 198365852 aggaggcaaaaggggctggagattgacttaaccactaacggccaatgattttatcaatcatgcctccataaaaaccctaaacaacaggatttg i rheMac3.chr3 C 0 C 0 s papAnu2.JH684865 46889 92 - 317753 AGGAGGCAAAAGGAACTGGAGATTGACTTAActaccaatggccaatgattttaTCAATCatgcctccataaaaaccc-aaacagcagggtttg i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124159778 84 - 127223203 aggaggctaaagggactggagattgacttagctaccaatggtca--------atcaatcatgcctccataaaaaccc-aaacaacagggtttg i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e macFas5.chr3 127701230 2688 - 192294377 I e ponAbe2.chr4_random 8238506 276 - 23176937 I a score=1239419.000000 s hg38.chr17_GL383563v3_alt 26136 766 + 375691 gagag-cttctgtgttgctaaacacaaggaggtcctgggagggtagtgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgtcctgtgcatctctttcattggctgttcctgagatggagccattacattgagccagtaatagaaaataaggtggccagatgcgctggctcatgcccgtaatcccagcactttgggaggcagaggtggg-cggaatcacttgagcctaggaatttgagaccaacctgggcaacataagaagaccccatctatacaa-aaaataaaagaaattagccaaatgtggtggtgggaaccctgtaattccagctacttgagaggctgaagcaggagaatcacttgagccctggacgttgaggcttcaa-tgagctatgattgcaccactgcacaccagcttggacaacagagcgaggccctgtctcttaaaaaaaaaaga--------------------aaaaaa---acttgtttttctaagttctgtgagttgttctagtaaataattaaactcaacaagagggtcatgggaaaccctgatttctaactggttggtcaaaatacaggtgacaacctaggacttgcaactggcatctgaagtgagggtggtcttgtgggactgagcccctaacctgtgggttctgtgctaactctaggtagtgtcagaatggaattgtgggatacgcggttggtatccagagagttggagaactggtgtagaaactctgcacacacagttggtcagaagtctgtgagtaga s panTro4.chr4 121847947 765 + 193495092 gagag-cttctgtgttgctaaacacaaggaggtcctgggagggtagtgtgcccaacagagggcatggaagctgtgtgcccctccccacttaccttgtcctgtgcatctctttcattggctgttcctgagatggagccattacattgagccagtaatagaaaataaggtggccagatgcactggctcatgcccataatcccagcactttgggaggcagaggtggg-cggaatcacttgagcctaggaatttgagaccagcctgggcaacataagaagaccccatctatacaa-aaaaaaaaagaaattagccaaatgtggtggtgggaaccctgtaattccagctacttgagaggctgaagcaggagaatcacttgagccctggaggttgaggcttcaa-tgagctatgattgcaccactgcacaccagcctggacaacagagcgaggccctgtctcttaaaaagaaaaga--------------------aaaaaa----cctgtttttctaagttctgtgagttgttctagtaaataattaaactcaagaagagggtcatgggaaaccctgatttctaaccggttggtcaaaatacaggtgacaacctaggacttgcaactggcatctgaagtgagggtggtcttgtgggactgagcccctaacctgtgggttctgcgctaactctaggtagtgtcagaatggaattgtgggatacgcggttggtatccagagagttggagaactggtgtagaaactctgcacacacatttggtcagaagtctgtgagtaga i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8238782 761 - 23176937 gagag-cttctg-gttgctaaacccaagga-gttctgggagggtagtgtgcccaacagagagca-ggaagctctgtgcccctccccacttaccttgtcctgagcatctctttcattggctgttcctgagatggagccattacattg-gccagtaatagaaaataaggtggccagatgcgctggctcatgcctgtaatcccagcactttgggaggcagaggtggg-tggaatcacttgagcctaggaatttgagaccaccctgggcaacataagaagaccccatctatacaa-aaaataaaagaaattagccagatgtggtggtgggaaccctataattccagctacgtgagaggctgaagcaggagaatcacttgagccctggaggttgaggcttcaa-tgagctatgattgcaccactgcacaccagcctggacaacagagcgaggccctgtctcttaaaaagaaaaga--------------------aaaaaa----cctgtttttctaagttctgtgagttgttctagtaaataattaaactcaagaagaaggtcatgggaaaccctgatttctaactggttggtcaaaatacaggtgacaacctaggacttgcaactggcatctgaagtgagggtggtcttgtgggactgagcccctaacctgtgggttctgcgctaactctaggtagtgtcagaatgcaattgcgggatacgcggttggtatccagagagctggcgaattggtgtagaaactccgcacatacatttggtcagaagtctgtgagtaga i ponAbe2.chr4_random I 276 C 0 s nomLeu3.chr17 46805073 762 - 99891981 gagaaccttccgtgtcgcggaactcagaagag---caggagagtagcgagcccaacagagggcacggaagctctgagcccctcgacaa-tacgttgtcatgtgcatctatttcactggttgttcctgagatggagcctttacgttgagccagtaatagaaaataagctggccagatgtggtggctcatgcctgtaatcccagcactttgggaggcagaggtggg-cggaatcacttgagcctaggaatttgagaccagcctgggcaacataagaagaccccatctatacaa-aaaataaaagaaattagccagatgtggtggtggaaaccctgtaattccagctacttgagaggctgaagcaggagaatcacttgagccctggaggctgaggcttcaattgagctatgaccgcaccactacacaccagcttggacaacagagtgaggccctgtctctt-aaaagaaaaga--------------------aaaaaa----cctgtttttctaagttctgtgagttgttctagtaagtaattaaactcaagaagagggtcatgggaaaccctgatttctaactggttggtcaaaattcaagtgacaacctaggacttgcaattggcatctgaactgagggtggtcttgtgggactgagcccctaacctgtggggtctgcactaactccaggtattgtcagaatggaactgtgggatacgcagttggtatccagacagttggagaattcgtgtagaaactccacacacacatttggtcagtagtgtgtgagtaga i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59784846 773 + 198365852 gagag-cttccgtgttgctgcacatgaggaggtgctggcagggtagtgtgcccaagagagggcatggaagctctgtgaccctccccacttgccttgccctgtgcatctctttcattggctgtttctgagatgtagcctttacattgaaccagtaatagaaaataaactggccagatgtggtgtctgatgcctgtaatcccagcactttcggaggcagaggtggg--ggaatcacttgagcccaagaatttgagaacagcctgggcaatgtaacaagactctatctatacaaaaaaataaaataaattagccagatgtggtggtgggaaacttgtaattccagctactagagaggctgaagcaggagaatcacttgagccctggaggttgaggtatcaa-tgagctatgattgcaccactgcactcgagcctgggcaatagagcgagaccctgtctcttaaaaaaaaaaaa-----------aaaagaaaagaaaaa-----ctgtttttctaagctctgtgagttgttctagcaaataattcaacctaagaagaaggtcatgggaacccctgatttctaactggttggtcaaaatacaggtgacaacctaggacttgcaactggcatctgaagtgagggtggtctcgtgggactgagctcctaatctgtggggtctgcactaactccaggtagtgtcagaatggaattgtgggatacgcagttggtatccagagagttggagaattggtgtagaagctctgcacacacatttggtcagaagtgtgtgagtaga i rheMac3.chr3 C 0 I 11 s papAnu2.JH684865 46981 740 - 317753 gagag-cttccacATTGCTGAACACAAGGAGGTCCTGGGAGGGTAGCATGCCCAacagagggcatggaagctctgtgcctCTCCCCACTTACCTTATCCTGTGCATCTCTTTCATTGGCTGTTCCTGAGATGGAGCCTTTACATTAAGCCAGTAATAGAAAATAAGCTGG-CACatgcggtggttcacgcttgtaatcccaggactctgggaggcagaggtggg-cggaatcacttgagcttaggaatttgagaccagcttgggaaacataagaagaccccatctatacaa------aaaataaattagccagatgtggtggtgggaactctgtaattccagctccttgagaggctgaagcaggagaatcacttgagccctggaggttgaggcttcaa-tgagctacgactgcaccattgcacaccagcctggacaacagagcgaggccctgtctcttaaaaaaaaaaaa-------aaagaaaagaaaagaaaaaaaatcctgctttTCTAAGTTCTGT------------------------------------GTCATGGGAAACCCTGATTTCTAACTGGTTGGTCGAAATACAGGTGACAACCTAAGACTtgcaattggcatctgaagtgagggTGGTCtcgtgggactgagcccttaacctgtgagGTCTGCATTAACCCGAGGTAGTATCGGAATGGAATTGTGGAATACGCAGTTGGTATCCAGAGAGTTGGAGAATTGGTGTAGAAACTCCACACACACATTTGGTCAGAAGCATGTGAGTAGA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124159862 786 - 127223203 gggaa-cttctgtgtcgctgaacacaaggaggtgctgggagggtagcgtgcccaacagagggcatggaagctctgtgcccctccccacttaccttgccctgtgcacctctttcactggctgttcctgagatggagcctttacattgagccagtaacagaaaataagctggccagatgaggtggctcatgcctgtaatcctagcactttgggaggcagaggtggggggaaatcacttgagtctaggaatttgagaccagcttgggcaacataacaagaccccatctatacaa-aaaataaaagaaattagcctgatatggtggtgggaaccctgtaattccagctacttgagaggctgaggcaggagaatcacttgagccctggaggttaaggcttcaa-tgagctacgattgcaccactgcatgccagcctggacaagagaacaaggccctgtctttaaaaaaaaaaaaaagaaaagaaagaaaggaaaggaaaaa----cctgtttttctaagttctgtgagttgttctagcaaataactaaactcaagaagagagtcatgggaaaccctgatttctaactggttggtcgaaatacaggtgacaacctaggacttgcaattggcatctgaagtaagggtggtctcgtgggactgagcccctaacctgtgaggtctgcactaaccccaggtagtgtcaaaatggaattgtggaatacgcagttggcatccagagagttggagaattggtgtagaaactccacacacacatttggttagaagtgtgtgagtaga i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e macFas5.chr3 127701230 2688 - 192294377 I a score=8248.000000 s hg38.chr17_GL383563v3_alt 26902 7 + 375691 gagaaac s panTro4.chr4 121848712 7 + 193495092 gaaaaaT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8239543 7 - 23176937 gagaaac i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46805835 7 - 99891981 gagaaac i nomLeu3.chr17 C 0 C 0 s papAnu2.JH684865 47721 7 - 317753 GAGAAAC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124160648 7 - 127223203 gaaaaac i chlSab2.chr21 C 0 I 6 e calJac3.chr2 1428789 1901 + 204313951 I e rheMac3.chr3 59785619 11 + 198365852 I e macFas5.chr3 127701230 2688 - 192294377 I a score=2115.000000 s hg38.chr17_GL383563v3_alt 26909 3 + 375691 Gtg s panTro4.chr4 121848719 3 + 193495092 Gtg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8239550 3 - 23176937 Gtg i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46805842 3 - 99891981 atg i nomLeu3.chr17 C 0 I 1108 s papAnu2.JH684865 47728 3 - 317753 ATG i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e chlSab2.chr21 124160655 6 - 127223203 I e rheMac3.chr3 59785619 11 + 198365852 I e macFas5.chr3 127701230 2688 - 192294377 I a score=279267.000000 s hg38.chr17_GL383563v3_alt 26912 1063 + 375691 ttgcaggaagtcagggaccccaaacagagggactggctgaagccacagcagaagaacataaattgtgaagatttcatggacatttattagttccccaaattaatacttctataatttcttaggcctgtcattactgcaatctctgaacataaattgtgaagatttcatggacacttatcacttccccaatcaatacccttgtgattttctatgcctgtcttta-----atctcttaatccggtcatcttcataagctgaggatgaatgtccccgcaggaccctgtgataattgcgttaactgcacaagttgtttaaacaatatgaaacctgggcaccttgaaaaaagaacaggataacagcaatttcagggaacaagggagataaccttaaactctggctgccagtgggccgggttgaacagagccatatttctcttctttcaaaagcaaataggagatgtattgctgaattctttttctcagcaaagaacatccctgagaaagagaatgcatccctaaggggaggcctctgaaatggccgctttggggacggctgtcttttacagtcatagataagggatgaaataagccctgggttcgcgtggcgctcccagccttatcaggacaaggaaattcccgcctaataaatgttggtcagatgggttgtctgctctcaaaccctttctcctgataagatgttatcaatgacaatgcgcgcccgaaacttcgttagcaattttaatttcgccccggtcctgtggtcctgtgatcttgccctgcctccatttgccttgtgatattttattaccttgtgaagcatgtgatctctgtgacccacaccctattcgtacactccctcaccttttgaaaatcactaataaaaacttgttggttttgcggcttggggggcatcacggaacctgccgacgtgtgatgtctcccctggacatccagctttaaaatttctctcttttgtactctttccctttatttctcagactggctgacactcagggaaaatagaaaagaacctacatgaaatatcaggggtgaatttcccccgataTC s panTro4.chr4 121848722 1067 + 193495092 ttgcgggaagtcagggaccccaaacggagggaccagctgaagccacagcagaagaacataaattgtgaagatttcatggacatttattagttccccaaattaatacttctataatttcttaggcctgtctttactgcaatctctgaacataaattgtgaagatttcatggacacttatcacttccccaatcaatacccttgtgatttcctatgcctgtctttactttaatctcttaatccggtcatctttgtaagctgaggatgaatgtccccacaggaccctgtgataattgcgttaactgcacaagttgtttaaacagtatgaaacctgggcaccttgaaaaaagaacaggataacagcaatttcagggaacaagggagataaccttaaactctggctgcctgtgggccaggtggaacagagccatatttctcttctttcaaaagcaaataggagaaatattgctgaattctttttctcagcaaagaacatccctgagaaagagaatgcatccctaaggggaggcctctgaaatggccgctttggggacagctgtcttttacagtcgtagataagggatgaaataagccctgggctcgtgtggcgctcccaggcttatcaggacaaggaaattcccgcctaataaattttggtcagatgggttgtctgctctcaaaccctttctcctgataagatgttatcaatgacaatgtgtgcccaaaacttcattagcaattttaatttcgccccagtcctgtggtcctgtgatcttgccttgcctccatttgccttgtga-attttattaccttgtgaagcatgtgatctctgtgacccacaccctattcgtacactccctccccttttgaaaatcactaataaaaacttgttggttttgcggcttgcggggcatcacagaacctgccgacatgtgatgtctcccctggacacccagctttaaaatttctctcttttgtatgctttccctttatttctcagaccggccgacactcagggaaaatagaaaagaacctacatgaaatatcaggggtgaatttcccccgataCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8239553 1068 - 23176937 ttgcaggaagtcagggaccccgaatggagggacctgctgaagccacggatgaagaacataaattgtgaagatttcatggacacttattagttccccaaattaataattccataatctcttacgcctgtctttactgcaatctctgaagttaaattgtgaagatttcatggacacttatcacttccccaatcaatacccttgtgatttcctatgcctgtctttactttaatctcttaatccggtcatctttgtaagctgaggatgaatgtccccgcaggaccctgtgataattgcattaactgcacaagttgtttaaacaatatgaaacctgggcaccttgaaaaaagaacaggataacagcaatttcagggaacaagggagataaccttaaactctggctgcctgtgggccgggtggaacagagccatatttctcttctttcaaaagcaaataggagaaatattgctgaattctttttctcaggaaagaacatccctgagaaagagaatgcatctctaaggggaggcctctgaaatggccgctttggggacggctgtcttttacagtcatagataaggggtgaaataagccccgggctcatgtggcgctcccagacttatcaagttgaggaaattcccgcctaataaattttggtcagatgggttgtctgctctcaaaccctttctcctgataagatgttatcaatgacaatgcgtgctcgaaacttgcttagcgattttaattttgccccggtcctgtggtcctgtgatcttgccctgcctccatttgccttgtgatattttattaccttgtgaagcatgtgatctctgtgacccacaccctattcatacactttctccccttttgaaaatcactaatagaatcttgttggttttgcggcttggggggcatgacggaacctgccgacatgtgatgtctcccctggacacccagctttaaaatttctctcttttgtactctttccctttatttctcagaccggctgacactcagggaaaatagaaaagaacctacatgaaatatcaggggtgaatttcccccgataTC i ponAbe2.chr4_random C 0 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e chlSab2.chr21 124160655 6 - 127223203 I e papAnu2.JH684865 47731 0 - 317753 C e rheMac3.chr3 59785619 11 + 198365852 I e macFas5.chr3 127701230 2688 - 192294377 I e nomLeu3.chr17 46805845 1108 - 99891981 I a score=1717.000000 s hg38.chr17_GL383563v3_alt 27975 5 + 375691 ACACT s panTro4.chr4 121849789 5 + 193495092 ACATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8240621 5 - 23176937 ACACG i ponAbe2.chr4_random C 0 C 0 s macFas5.chr3 127703918 5 - 192294377 acaTG i macFas5.chr3 I 2688 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e chlSab2.chr21 124160655 6 - 127223203 I e papAnu2.JH684865 47731 0 - 317753 C e rheMac3.chr3 59785619 11 + 198365852 I e nomLeu3.chr17 46805845 1108 - 99891981 I a score=1410.000000 s hg38.chr17_GL383563v3_alt 27980 3 + 375691 GGC s panTro4.chr4 121849794 3 + 193495092 GGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8240626 3 - 23176937 GGC i ponAbe2.chr4_random C 0 C 0 s macFas5.chr3 127703923 3 - 192294377 AGT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 47731 3 - 317753 AGT i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e chlSab2.chr21 124160655 6 - 127223203 I e rheMac3.chr3 59785619 11 + 198365852 I e nomLeu3.chr17 46805845 1108 - 99891981 I a score=2865.000000 s hg38.chr17_GL383563v3_alt 27983 2 + 375691 TC s panTro4.chr4 121849797 2 + 193495092 TC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8240629 2 - 23176937 TC i ponAbe2.chr4_random C 0 C 0 s macFas5.chr3 127703926 2 - 192294377 TC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 47734 2 - 317753 TC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124160661 2 - 127223203 TC i chlSab2.chr21 I 6 C 0 e calJac3.chr2 1428789 1901 + 204313951 I e rheMac3.chr3 59785619 11 + 198365852 I e nomLeu3.chr17 46805845 1108 - 99891981 I a score=530855.000000 s hg38.chr17_GL383563v3_alt 27985 248 + 375691 TTCTCTCACCTGTCTACCTGCTTAACTTAATAGgagaggcaatgcatggtgctcatgaacaaggcaagcattaaagtcagaccaga-ctaacatttgactcagtcctaatattcaggtgagcttgggcaaatcgctcattaaccccaagtcttcatcattttgtgcatataatggggataactgtggcacccacctgt--ttttgtgagaatcaatgaaatattatgcttgATGTTATTGTGATCATGAT-----------A s panTro4.chr4 121849799 248 + 193495092 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagaggcaatgcatggtgctcatgaacaaggcaagcattaaagtcagaccaga-ctaacatttgactcagtcttaatattcaggtgagcttgggcaaatcgctcattaaccccaagtcttcatcattttgtgcatataatggggataactgtggcacccacctgt--ttttgtgagaatcaatgaaatattatgcttgATGTTACTGTGATCATGAT-----------A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8240631 248 - 23176937 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagaggcaatggatggtgctcatgaacaaggcaagcattaaagtcagaccaga-ctaacatttgactcagtcttaatattcaggtgagcttgggcaaatcgctcattaaccccaagtcttcatcattttgtgcatataatggggataactgtggcacccacctgt--ttatgtgagaatcaatgaaatattatgcttgATGTTATTGTGATCATGAT-----------A i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59785630 262 + 198365852 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagagacaatgcatggtgctcatggaaaaagcaagcattaaagtcaaacaagacccaatatttgactcagtcttaatatccaggtgagcttgggcaaatcacttattatccccaagtcttcatcattttgtgtgtaaaatggggataactgtggcacctacctatgattttgcaagaactaatgaaatactatgcttgATGTTATTGTGATTATTATACCTACTCCAAA i rheMac3.chr3 I 11 C 0 s macFas5.chr3 127703928 249 - 192294377 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagagacaatgcatggtgctcatgaacaaggcaagcattaaagtcagaccagacctaacatttgactcagtcttaatatccatgtgagcttgggcaaatcgctcattaaccccaagtcttcatcatttcatgcataaaatggggataactgtggcacctacctat--ttttgtgagaattaatgaaatactatgcttgatgttattgtgatcatcat-----------a i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 47736 249 - 317753 TTCTCTTACCTGTCTACCTGCTTAACTGCATAGGAGAGACAATGCACGGTGCTCATgaacaaggcaagcattaaagTCAGACCAGACCTAACATTTGACTCAGTCTTAATAACCAGGTGAGCTTGGGCAAATCGCTCATTAACCCCAAGTCTTCATCATTTTGtgcataaaatggggataactgTGGCACCTACCTgt--ttttgtgagaattaatgaAATATTATGCTTGATGTTATTGTGATCATCAT-----------A i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124160663 249 - 127223203 TTCTCTCACCTGTCTACCTGCTTAACTGCATAGgagagacagtgcacggtgctcatgaacaaggcaagcattaaagtcagaccagacctaacatttgactcagtcttaatatccaggtgagcttgggcaaatcgctcattaaccccaagtcttcatcatttcgtgcataaaatggggaaaactgtggcacctacctgt--ttttgtgagaattaatgaaatactatgctcgatgttattgtgatcatcat-----------a i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1430690 243 + 204313951 ttttctcACCTG----CCTCCTTAACTGCAGAGGAGACGCAGTGCGTGGTGCTCATGAACAGAGCAAGCGTTAGAGTCACACCAGGCCCTACATCCGCCTCAGTCTTAATA-CTATGTGAGCGTGGGCAAA--GCTCGGTATCCCCAAGTCTTCATCACTTCGTTCAGCAAATGGGGCTAACTGTGGCGCCTGCCTGAGATTTTG-GAGAATTCATGAAACATTATGCTTGATGTTACTGTGACCATCAC-----------A i calJac3.chr2 I 1901 I 11862 e nomLeu3.chr17 46805845 1108 - 99891981 I a score=1068043.000000 s hg38.chr17_GL383563v3_alt 28233 492 + 375691 CTATCTGACAAGGGCAGTGATGCATGATAACATCAAAAAATTAGAAACTGTAATGAGGTCTCTTGGGCAAAATTCCATACAAGCAAATTACTGTCTCTACAAAGCATTTCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGTGCCATCTTCATTGTTCAGGTCTGTATAGTGCTGGTTTCCCTGCCTGGGCAGCTCACTccatcccatcccagcccaatccccatccctccacctcccccttccctccccaCTCTCATACAACTCTTCCTTATCTTACAGGACTTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCCCTCTCCAGAAGAGCTTCCGATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTACAGTCCAAGTCTTTTTGTACTTGAATAACATGTTGCCCAGTCAGTTTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGGTCCAGCTAGAAGTGACAAAAAGACA s panTro4.chr4 121850047 489 + 193495092 CTATCTGACAAGGGCAGTGATGCATGATAACATCAAAAAATTAGAAACTGTAATGAGGTCTCTTGGGCAAAATTCCATACAAGCAAATTACTGTC---ACAGAGCATTTCTGCCACACTTAACTCACCATTCCTTGAAC-AAAATGTGCCATCTTCATTGTTCAGGTCTGTATAGTGCTGGTTTCCCTGCCTGGGCAGCTCACTCCATGCTATCCCAGCCCAATCCCCATCCCTCCACCTCCCCCTTCCCTCCCAACTCTCATACAACTCTTCCTTATCTTACAGGACTTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCCCTCTCCAGAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGACTTACAGTCCAAGTTTTTTTGTACCTGAATAACATGTTGCCCAGTTAGTTTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGGTCCAGCTAGAAGTGACAAAAAGACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8240879 491 - 23176937 CTATCTGACAAGGGCAGTGATGCATGATAACATCAAAAAATTAGAAACTGTAATGAGGTCTCTTGAGGAAAATTCCATACAAGCAAATGACCGTCTCTCCAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGAGCCATCTTCACTGTTCAGGTCTGTATAGTGCTGGTTTCCCTGCCTGGGCAGCTCACTCCATCCCAGCCCAGCCCAATCCCCATCCCTCCACCTCCCCCTTCCCTCCCCACTGTCATACAACTCTTCCTCATCTTACAGGACTTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCCCTCTCCAGAAGAGATTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTACAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGGTCCAGCTAGAAGTGAC-AAAAGACA i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59785892 493 + 198365852 CTATCTGACAAGGACAGTGATGCATGATAACATCAACAGATTAGAAATTGTAATGAGTTCTCTCAGGCAAAATTCCATACAAGCAAATTACCGTCTCTCCAAAGCATTCCCATCATACTTAATTCACCATTCCCTGAACAAAAATGTGCCATCTTCATTGTCCAGGTCTTTATAGTGCTGGTTTCCCTGCCTGGGCAGCTCCCTCCATCCCATCCCAGCCCATTCCCCATCCCTCCACCTCCCCCTTCCCTCTCCACTCTCATACAACTCTTCCTCATCTTTCAGGACCTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCACCCTCCGGAAGAGCTTCCCATTGCATTTGATGCATGTACTGTTATTTGACCATTTTTGAGTAATAGTCCAAGTCTTTTTGTACCTGAATAAGATGTTGCCCAATCAGTCTCTCTTCCTGGATTCTGAAGTCTTTCATGGTAGATTCAGCTGGAAATGACAAAAAGACA i rheMac3.chr3 C 0 I 3 s macFas5.chr3 127704177 480 - 192294377 ctgtttgacaagtacagtgaggcatgataaCATCAAAAACTTAGAAACTGTAATGAGG--TCTTGGGCAAAACTCCATA---------TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAC-AAAATGTGACATCTTCATTGTCCAGGTCTGTACAGTGCTGGTTTCCTTGCCTGAGCAGCTCACTccatcccatcccagcccattcctcatccctccacctcctccttccctcccCACTCTCATACAACTCTTCCTCATCTTTCAGAACCTGGCTTTAATGTCACCTTAACTGGAAGCTTCTCTCACCCTCCAGAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGG-AGTGACAAAAATACA i macFas5.chr3 C 0 I 3 s papAnu2.JH684865 47985 490 - 317753 CTGTTTGACAAGGACAGTGATGCATGATAACATCAAAAACTTAGAAACTGTAATGAGG--TCTCAGGCAAaattccagacaagcaaatgacCATTTCTCCAAAGCATTCCTGCCACACTTAATTCACCATTCTCTGAAC-AAAATGTGCCATCTTCATTGTTCAGGTCTGTACAGTGCTGGTTTCCCTGCCTGGGCTGCTCACtccatcccatcccagcccattccccatcctttcacctcccctttccctccccactCTCATACAACTCTTCCTCATCTTTCAGGACCTGGCTTCAATGTCACCTTAACTGGAAGCTTCTCTCACCCTCCAGAAGAGCTTCTCACTGTACTTGATGCATGCACTATCATTTGATCATTTTTGAGTTACAGTGCAAGTCTTTTTGTATCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGACTCTGAAGTCTTTCATGGTAGATCCAGCTGGAAGTGACAAAAAGACA i papAnu2.JH684865 C 0 I 1121 s chlSab2.chr21 124160912 480 - 127223203 ctgtttgacaagtacagtgaggcatgataaCATCAAAAACTTAGAAACTGTAATGAGG--TCTTGGGCAAAACTCCAAA---------TACTGTCTCTACAAAGCATTCCTGCCACACTTAATTCACCATTCCCTGAAA-AAAATGTGCCATCTTCATTGTCCAGGTCTGTACAGTGCTGGTTTCCCTGCCTGGGCTGCTCACTccatcccatcccagcccattcctcatccctccACGTCCcccttccctccccactctcatacaactcttcctcatctttcaggacctggcttcaatgtcaccttaactggaagcttctctcaccctccagAAGAGCTTCCCATTGCACTTGATGCATGCACTATTATTTGATCATTTTTGAGTTATAGTCCAAGTCTTTTTGTACCTGAATAACATGTTGCCCAGTCAGTCTCTCTTCCTGGATTCAGAAGTCTTTCATGGTAGATCCAGCTGG-AGTGACAAAAATACA i chlSab2.chr21 C 0 I 3 s calJac3.chr2 1442795 486 + 204313951 CTATTTGACAGGCACAGTGATGGATGATGACATCACAAAATTAGAAACTGTAGTGAGGTCTCTTTGGCAAAATTCCATACAAGCAAATTACTGTCTCTCCAAAGtattcctgccacacttaattcagcattccctgaag-aacatgtgccatcttaattgtccaggtctttacagagctgctttccctgccgggaa----cgctccatcccATCCCAGCCCACTCCCCATGCCTCCACCTCCCCCTTCCCTCCCCACTCTCATACAACTTTTCCTCATCTTTCAAACCCCGGCTTTAACATCACCTTATCTAGAAGCTGCCCTCACTCCCCAGAAGTGCTTCCCACTGCTCTTGAGGCATGCACTATTATTTGATCATTATTGAGTTATTGTCCAAGTCTTTTTGTACCTGAGTAACATGCTGCCCAGTCAG--TCTCTTCCTGGACTCTGAAGTCTTTCATGGTAAATCCAGCTGGAAGTGACATAAAGACA i calJac3.chr2 I 11862 C 0 e nomLeu3.chr17 46805845 1108 - 99891981 I a score=24411.000000 s hg38.chr17_GL383563v3_alt 28725 26 + 375691 --TTTAAAA--AAAAAAAAA---------------GAGGGATGAC s panTro4.chr4 121850536 35 + 193495092 --TTTaaaa--aaaaaaaaaaaa------aaaaaaGAGGGATGAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8241370 32 - 23176937 --TTCTAAA--AAAAAAAAA---------AAAAAAGAGGGATGAC i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59786388 23 + 198365852 --TTTGAAA--------------------AAAAAAGGGGGATGAT i rheMac3.chr3 I 3 C 0 s macFas5.chr3 127704660 41 - 192294377 --CTTGaaa--aaaaaaaaacaagaaaataaaaaaGAGGGATGAC i macFas5.chr3 I 3 C 0 s chlSab2.chr21 124161395 43 - 127223203 --CTTGaaaaaaaaaaaaaacaagaaaagaaaaaaGAGGGATGAC i chlSab2.chr21 I 3 C 0 s calJac3.chr2 1443281 27 + 204313951 TTCTTGAAA--AATAAAAGA----------------AGGAATGAC i calJac3.chr2 C 0 C 0 e papAnu2.JH684865 48475 1121 - 317753 I e nomLeu3.chr17 46805845 1108 - 99891981 I a score=51003.000000 s hg38.chr17_GL383563v3_alt 28751 27 + 375691 ACAGACA----TCAGCACTTAAAAGTTTTAA s panTro4.chr4 121850571 31 + 193495092 ACAGACAGACATCAGCACTTAGAAGTTTTAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8241402 31 - 23176937 CCAGACAGACATCAGTACTTAAAAGTTTTAA i ponAbe2.chr4_random C 0 I 578 s nomLeu3.chr17 46806953 27 - 99891981 ACAGACA----TCAGTACTTAAAAGTTTTAA i nomLeu3.chr17 I 1108 C 0 s rheMac3.chr3 59786411 31 + 198365852 ATAAAGAGACACAAGTTCTTAAACGTTTTAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127704701 31 - 192294377 ACAGACAGACATCAGTACTTAAAAGTTTTAA i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124161438 31 - 127223203 ACAGACAGACATCAGTACTTAAAAGTTTTAA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1443308 27 + 204313951 ----AAGGACATCAGTATTTAGAAGTTTTAA i calJac3.chr2 C 0 C 0 e papAnu2.JH684865 48475 1121 - 317753 I a score=456362.000000 s hg38.chr17_GL383563v3_alt 28778 292 + 375691 ACGATATGTG----------AA----AAACAAAATTTAAGGGCTTCTAGGAGAAATGTAGGAGGGAAGGTGTTACTGGGAAATATGATAGAAGGTTAAtttttattttattttat-ttttagagaaagggtcttgctctatcacctaggctggactgcagtggtgcaatcacagttaactgcagcctcaacctccagggcttgagcaatattcccatctAAtttttattttgtttaagaaatgcagtcttgctc--ttagcaaagctaaagtgcaatggtgtgatcatagcttac---tgcagcctcaacct s panTro4.chr4 121850602 292 + 193495092 ACGATATGTG----------AA----AAACAAAATTTAAGGGCTTCTAGGAGAAATGTAGGAGGGAAGGTGTTACTGGGAAATATGATAGAAGGTTAAtttttattttattttat-ttttagagaaagggtcttgctctatcacctaggctggactgcagtggtgcaatcacagttaactgcagcctcaacctccagggcttgagcaatattcccatctAAtttttattttgtttaagaaatgcagtcttgctc--ttagcaaagctaaagtgcaatggtgtgatcatagcttac---tgcagcctcaacct i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46806980 291 - 99891981 ATGGTATGTG----------AAAAACAAACAAAATTCAAGGGCTTCTAGGAGAAATGTAGGAGGGAATGTGTTACTGGGAAATATGATAGACGGTTAAt-----ttttattttat-ttttagagaaagggtcttgctctatcgcctagactggactgcagtggtgcaatcacagttaactgcagcctcaacctccagggctcgagcaatattcccatctAATGtttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtataatcatagcttac---tgcagcctcaacct i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59786442 310 + 198365852 ATGGTATGTGAAAAGCAAACAAAAGCAAACAAAATTCAAGGGCTTCTAGGAAAAACGTAGGAGGGATGGTGTCACT-GGGAATATGATAAAGGGTTAAtttttagtttattttgt-tttttgagaaagggtcttgctctgtcgcctcggctgttcttcaatggtgcaatcacagctcactgcagccttaacctcctgggcttgagcaatattcccatctAAtttttattttatttaagaaacgcaatcttactctgttaccaaagctggagtgcagtggtgtgatcatagcttacaaatacagcctcaacct i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127704732 296 - 192294377 ATGGTATGTG----------AAAAACAAACAAAATGCAAGGGCTTCCAGCAGAAACATAGGAGGGAAAGTGTTACTAGGAAATATAACAGAAGGTTACtttttattttattttat-ttttagaaaaagggtcttgctctatcgcctaggctggactgcagtggtgcaatcacagttaactgaagcctcaacctccagggctcgagcaatattcccatctAAtttttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtgtgatcatagcttac---tgcagcctcaacct i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124161469 296 - 127223203 ATGGTATGTG----------AAAAACAAACAAAATGCAAGGGCCTCCAGCAGAAACGTAGGAGGGAAAGTGTTACTAGGAAATATAACAGAAGGTTACttttaattttattttat-ttttagaaaaagggtcttgctctatcgcctaggctggactgcagtggtgcaatcacagttaactgaagcctcaacctccagggctcgagcaatattcccatctAAtttttattttatttaagaaacacagtcttgctc--ttaccaaagctaaagtgcagtggtgtgatcatagcttac---tgcagcctcaacct i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1443335 297 + 204313951 ATGGTATGTG----------GAAAGTAAGCAAAACTCAAGAGCTTCTAGGAAAAACATAGGAGGGAAGGTGTTACTGGGAAATATGCTAAAGAGTTCATGtttattttactttatatttttgagaaagaatcttgctctatcgccttggctggactgcaatggtaccatcacagctcactgcagcctcagcctccagaggttcagccatcttccATCCTAAtttttatcttatttaagaaacacagtcttactg--tgactaaggctggagtgcagtggtatgatcacagctcac---tgcagcctcagcct i calJac3.chr2 C 0 I 1636 e papAnu2.JH684865 48475 1121 - 317753 I e ponAbe2.chr4_random 8241433 578 - 23176937 I a score=81826.000000 s hg38.chr17_GL383563v3_alt 29070 67 + 375691 tctagactcaagtgatcctccagtcttagcctccccagtagctcggactacaggtgtgcactgcaac s panTro4.chr4 121850894 67 + 193495092 tctagactcaagtgatcctccagtcttagcctccccagtagctgggactacaggtgtgcactgcaac i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46807271 67 - 99891981 tctaggctcaagtgatccttcagtcttagcctccccagtagctgggactacaggtgtgcactgcaat i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59786752 67 + 198365852 cctagggtcaagagatcttctagtctcagcctcccctgtagctgggactacaggtgtgcactacaat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127705028 67 - 192294377 tctaggctcaagtgatcctccagtcttagcctccccagtagctgggactataggtgtacagtgcaat i macFas5.chr3 C 0 C 0 s chlSab2.chr21 124161765 67 - 127223203 tctaggctcaagtgatcctccagtcttagcctccccagtacctgggactacaggtgtgcagtgcaat i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1443632 1636 + 204313951 I e papAnu2.JH684865 48475 1121 - 317753 I e ponAbe2.chr4_random 8241433 578 - 23176937 I a score=830319.000000 s hg38.chr17_GL383563v3_alt 29137 513 + 375691 gtgtagctca--ttttttttttttaatttttagtagagacaaagtgtcactatgttgaccaggttggtggtgatctcctacactcaggcagttctctcacctcagccttccaaaatgctgggattacaggtgtgagctgc-------------------------cacacctggcTGA---GGGGGTTAATTTTTAATTATATAAAGAGCTCAAAGCaaatattagaagaagcctaaatgcctccagcagttgactggtactggtaaattgtgatacatccatataataaaatattatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaatatGAAAATATGAAGTGATGTTCAATCACCATGTACGTATCTTGAAGGATATGGCCCATTTTCTCAACTGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGTGAAGGACATTTTTCACTTATTTA----AAAGTATTTATCATTTTTATAATTTAATAAAAGATTAAAC----AGATCATTGAATTAGTA s panTro4.chr4 121850961 512 + 193495092 atgtagctc---ttttttttttttaatttttagtagagacaaagtgtcactatgttgaccaggttggtggtgatctcctacactcaggcagttctctcacctcagccttccaaaatgctgggattacaggtgtgagctgc-------------------------cacacctggcTGA---GGGGtttaatttttaattatataaaGAGCTCAAAGCaaatattagaaggagcctaaatgcctccagcagttgactggtactggtaaattgtgatacatccatataataaaatattatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaataCGAAAATATGAAGTGATGTTCAGTCACCATGTACGTATCTTGAAGGATATGGCCCATTTTCTCAATTGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGTGAAGGACATTTTTCACttattta----aaagtatttattatttttataatttaataaaaGATTAAAC----AGATCATTGAATTAGTA i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46807338 508 - 99891981 gtgtagctcattttttttttttttaatttttagtagagacaaagtgttgctatgttgaccaggctggtggtgatctcctacacgcaggcagttctcccacctcagccttccaaagtgctgggattacaggtgtgagctgc-------------------------cacacctggcTGA---GGGGGTTAATTTTTAAT--TATAAAGAGCTCAAAGCaaatattagaaggagcctaattgcctacagcagctg------actggtaaattgtgatacatccatataataaaa---tatgtaaccatgaaaaggattaagacagatcaataggtattggcacaaatgtccatgaaatatgaaaatgtgaagtgaTGTTCAATCACCGTGTATGTATCTTGAAGGATATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGAGTGAAGGAAATTTTTCACTTCTTTATTTTAAAGTATTTACTATTTTTATAATTTAATAAAAGATTAAAC----AGATCATTGAATTAGTA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59786819 514 + 198365852 gtcaagctcattttttttttttttaatttttagtagacacaaagtgtcgttatgttgaccaggctggtggtaatctcctaccctcaagcagttctcccacctcagccttccagagtgctgcgatttcaggtgtgagctgc-------------------------cacacctggcTGAGGGGGGGGTTAATTTTTAATTATATAAAGAGCTCAAAGCaaatattagaaggagcctaaatgcctacagcagttg------acttataaattgtgatacatccatataataaaatattatgcaaccatgaaaaggatt----taaagcaataggtattggcatagatattcacaaaatatgaaaatgtgaagtgaCGTCCAATTAGCCTATATGTATCTTGAAGAATATGGCCCATTTTCACAATAGCAATTATTTCCTGAGATAAAATTGTGGGTCTAAAGAGTAAAGGAAATTTTTCACTTCtttatttaaaagtatttactatttttataatttaat--GAGATTAAACAAATAGATCAtcaaattagca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127705095 533 - 192294377 gtgtagctca----atatttttttaatttttagtagagacaaagtgtcgctatgttgaccaggctggtggtgatctcccacactcaggcagtcctcccacctcaactttccaaagtgctgggattacaggT-TGACCTGCCTATAACACCACACAGGTGTGACCTCACACCTGGCTGA---GGGGGTTAACTTTTAATTATATAaagagctcaaaggaaatattagaaggagcctaaatgcctacagcagctg------atgagtaaactgtgatacatctacataacaaaatattatgcaaccatgaaaagcattaagatagatcaataggtattggcacaaatgtccacgaaatatgaaaatgtgaagtgaTGTTCAATTACCATGTATGTATCTTGACGGACATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGACTGAAGGAAATTTTTCACTTATTTATTTAAAAGTATTTACTATTTTTATAATTTAATAAAAGATtaaac----agatcatcgcattagta i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 49596 506 - 317753 gtgtagctca--ttttttttttttaatttttagtagagacaaagtgtCGCTATGTGGACCAGGCTGGTGGTGATCTCCCACACTCAGGCAGTTCTCCCatctcaaccttccaaagtgctgggattacaggtgtgagctgc-------------------------cacacctggctga---ggggtttaatttttaattatataaagagctcaaagCAAATATTAGAAGGAGCCTAAATGCCTACAGCAGTTG------ACTAGTAAATTGTGATACATCCATGTAATAAAATATCATGCAACCATGAAAAGGATTAAGATAGATCAATAGGTATTGGCACAAATGTCtatgaaatatgaaaatgtgaAGTGATGTTCAATCACCATGTATGTATCTTGAAGGATATGGCCCATTTTCTCAACAGCAATTATTTCCTGAGATAAGATTATGGGtctaaagagtaaagaaaaatttttccttatttatttaaaaatgtttactatttttataattt-----aagattaaaC----AGATCATCAAATTAGTA i papAnu2.JH684865 I 1121 C 0 s chlSab2.chr21 124161832 533 - 127223203 gtgtagctca-----attttttttaatttttagtagagacaaagtgttgctatgttgaccaggctggtggtgatctcccacactcaggcagttctcccacctcaaccttccaaagtgctgggattacaggtgtgaCCTGCCTGTAACACCACACAGGTGTGACCTCACACCTGGCTGA---GGGGGTTAATTTTTAATTATATAAAGAACTCAAAGCaaatattagaaggagcctaaatgcctacagcagctg------atgagtaaactgtgatacatctatataacaaaatattatgcaaccatgaaaaggattaagatagatcaataggtattggcacaaatgtccacgaaatatgaaaatgtgaagtgaTGTTCAATTACCATGTATGTATCTTGAAGGATATGGCCCATTTTCTCAATAGCAATTATTTCCTGAGATAAGATTATGGGTCTAAAGACTGAAGGAAATTTTTCACTTATTTATTTAAAAGTATTTACTATTTTTATAATTTAGTAAAAGATtaaac----agatcatcgcattacta i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1443632 1636 + 204313951 I e ponAbe2.chr4_random 8241433 578 - 23176937 I a score=851810.000000 s hg38.chr17_GL383563v3_alt 29650 414 + 375691 AAAGACAAAGTAACTCTATAAATAAATGGAAAAGACACAGATACCccaggca-tggtggctcatgcttataatacc-agtactttgggagggggtggt-ggggggattgcttgaggctaggagttccagaccagcctaagaaacaaagcaagacctcctctctagtaaaaat--aaaaaaataaaaataattggccaggcatagtggcatgtgcctatagtcccaactactgaggtggaag-gatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgccactacactgaagcctaggagacagagcgagacttcatctcaaaaaaaaaaaaaaa-----g-----gacaataaagaaaTAAAGCTAATAAGCTAACATAAGGGAAGAT---A-AAATATGTGACAAATAggctgggcac-atg s panTro4.chr4 121851473 415 + 193495092 AAAGACAAAGTAACTCTATAAATAAATGGAAAAGACACAGATACCccaggca-tggtggctcatgcttataatacc-agtactttgggagggggtggt-ggggggattgcttgaggccaggagttccagaccagcctaagaaacaaagcaagacctcgtctctagtaaaaat--aaaaaaataaaaataattggccaggcatagtggcatgtgcctatagtcccaactactgaggtggaag-gatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgccactacactcaagcctaggagacagagcgagacttcatctcaaaaaaaaaaaaaaa----ag-----gacaataaagaaaTAAAGCTAATAAGCTAACATAAGGAAAGAT---G-AAATATGTGACAAATAggctgggcgc-atg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8242011 407 - 23176937 AAAGACAAAGTAACTCTATAAATAAATGGAAAAGACACAGATACCccaggcattggtggctcatgcttat-atacc-agtactttgggagggggtg---ggggggattgcttgaggccaggagttccagaccagcctaagaaacaaagcaagacctcgtctctagtaaaaat--aaaaaaataaaaataattggccaggcatagtggcatgtacctatagtcccaactactgaggtggaag-gatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgccactacactcaggcctaggagacagagcgagacttcatctcaaaaaaaaaa----------g-----gacaataaagaaataaaGCTAATAAGCTAACATAAGGAAAGAT---A-AAATATGTGACAAATAggctgggcgc-atg i ponAbe2.chr4_random I 578 C 0 s nomLeu3.chr17 46807846 416 - 99891981 AAAGACAAACTAACTCTATAAATAAATGGAAATGACATGGACAGCccaggca-tggtggctcatgcttgtaatacc-agtactttgggacggggcattggggggaatcgcttgaggccaggagttccagaccagcctaagaaacaaagcaagaccttgtctctactaaaaat--ta------aaaaaaaattggccaggcatagtggcatgtgcctatagtcccaactactgaggtggaag-gatcacctgagcccaggaggtcaaggctgcagagtgagttgaga------ctgtgccactacactcaagcctgagagacagagcaagacttcatctcaaaaaaaaaaaaaaaaaaaag-----gacaataaaGATATAAAGCTAATAAGCTAACATAAGGAAAGAT---A-GAACATGTGACAAACAggccaggtgc-gtg i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59787333 423 + 198365852 aaatacacattaactctataaataaatggaaaagacacagacagcccaggca-tggtggctcacacttacaataccaagcactttgggagagggtggt-gggaggattgtttgaggccaggagttccagaccagcctgggaaacatagcaagacgttgtctccactaaaaat--aaa-----aaataaaaatagccagacatggtggcatgtgcctatagtcccagctactgaggtggaag-gatcacttgagtccaggaggtcaaggctgt--ggtgagttgagactctgcctgggccactacactcaagcctggaagacacagtgagacttagtctcaaaaaaaaaaaaaaaaaaaaa-----gacaataaagaaataaagctaataagctaacaaaagaaaagat---attaaaatgtgacaaacaggacgggcacggtg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127705628 417 - 192294377 aaagacaaattaattctataaacaaatggaaaagacacggacagcccaggca-tggtggctcacacttataatact-agtattttgggaggggttggt-ggggggattgctggaggccaggagtccccgaccagcctaagaaacaaaggaagaccttgtctctactaaaaat--taa-----aaaaaaaattggccaggcatagtggcatgtgcccataaacccaactactgaggtggaag-gatcacctgagaccaggaggtcaagactgc--agtgagttgaga------ctgtgccactacactcaagcctgggagacagagcgagacttcatctcaaaaaaaaaaaaaaaaaaaaa--aaggacaataaagaaacaaagctaataagctaacacaacgaaagat---a-aaacatgtgacaaacaggccaggtac-gtg i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 50102 419 - 317753 AAAGACAAATTAACtctataaataaatggaaaaga-atggacaccccagaca-tggtggctcatgcttataatacc-agtactttgggaggggaTGGTgggggggatcgcttgagggcaggagtttcagaccagtctaaGAAACAAAGTAagacctcgtctgtactaaaaacaataa-----aacaaaaattggccaggcatagtggcatgtgcctacagtcccaactACTGAGGTGGAAGttatcacctgagcctaggaggtcaaggctgc--agtgagttgaga------ctgtgccactacactcaagcctgggagacagagcaagacttcatctcaaaaaaaaaaaaaaaaaaag------gacaataaagaaataaagctaataagctaacttaagaaaacattaaa-agaaatgtgACAAATAGGCTGGgcga-gtg i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124162365 418 - 127223203 aaagacaaattaattctataaacaaatggaaaagacacggacagcccaggca-tggtggctcacgcttataatact-agtattttgggagggggtggt-ggggggatcgcttgaggccaggagtcccagaccagcctaagaaacaaaggaagacgtcgtctctactaaaaat--taa-----aaa-aaaattggccaggcatagtggcatgtgcccataaacccacctactgaggtggaag-gatcgcctgagaccaggaggtcaagactgc--agtgagttgaga------ctgtgccactacactcaagcctgggagacagagcgagacttcatctcaaaaaaagaaaaaaaaaagaaaaaaggacaataaagaaacaaagctaataagctaacacaaggaaagat---a-aaacatgtgacaaacaggccaggtac-gtg i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1443632 1636 + 204313951 I a score=343463.000000 s hg38.chr17_GL383563v3_alt 30064 137 + 375691 gctcacagctgtaat-caagcactttgggaggccaaggcgggtagatca--cgagatcaggagttcgagaccagcctgatcaacatggtgaaaccacgtttctactaaaaatacaaa--------aattaatcaggcatggtggcata s panTro4.chr4 121851888 137 + 193495092 gctcacagctgtaat-caagcactttgggaggccgaggcgggtagatca--cgaggtcaggagttcgagaccagcctgatcaacatggtgaaaccacgtttctactaaaaatacaaa--------aattagccgggcatggtggcatg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8242418 137 - 23176937 gctcacagctgtaat-caagcactttgggaggccgaggcaggtagatca--cgaggtcaggagttcgagaccagcctgatcaacatggtgaaaccccatttctactaaaaatacaaa--------aattagctgggcatggtggcatg i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46808262 131 - 99891981 gctcacgcctgtaat-ccagcactttgggaggctgaggtgggtagatca--cgaggtcaggagttcgagaccagcctgatcaacatggtgaaaccccatctgtact-aaaatacaaa--------aatta-----gcATGCTGCTATA i nomLeu3.chr17 C 0 M 1249 s rheMac3.chr3 59787756 138 + 198365852 gctcatgcctgtaatcccagcactttgggaggctgaggtgggtggatca--tgagttcaggagttcaagaccagcctgatgagtatggtgaaaccccgtctctactaaaaatgcaaa--------aattagtcaggcatggtggcagg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127706045 137 - 192294377 gctcacacctctaat-ccagcactttgggaggccgaggcgggtagatca--cgaggtcaggagtttgagaccagcctgatcaatacggtgaaaccccatctctactaaaaatacaaa--------aattagccaggcgtggtggtgtg i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 50521 137 - 317753 gctcatgcctgtaat-ccagcactttgggagggtcaggcgggtagatca--caaggtcaggagttcgagaccggcctgatcaacatggtgaaaccccgtttctactaacaatacaaa--------aattagccagacgtggtggtggg i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124162783 137 - 127223203 gctcacacctctaat-ccagcactttggaaggccgaggcaggtagatca--cgaggtcaggagtttgcgaccagcctgatcaatacggtgaaaccccatctctactaaaaatacaaa--------aattagccaggcgtggtggtgtg i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445268 147 + 204313951 gctcacacc-gtaatcctagcactttgagaggctgagtcaggtggatcactcgaggtctggagtttgagaccatcctgaccaacatggagaaaccctatctctactgaaaatatgaaattagctgaattagccaggtatggtggcgca i calJac3.chr2 I 1636 C 0 a score=266791.000000 s hg38.chr17_GL383563v3_alt 30201 144 + 375691 ttcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggc--acaggttgc-----agtgagccgagatcacaccactgcactccagcctggtcgac-agagcgagactgtgtct-caaaaaag--------------------------aaaaaagaa----- s panTro4.chr4 121852025 144 + 193495092 tgcctataatcccagctactcagaaggctgaggcaggagaatcgcttgaacctgggaggc--acaggttgc-----agtgagccgagatcacaccactgcactccagcctggtcgac-agagcgagactgcgtct-caaaaaag--------------------------aaaaaagaa----- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8242555 142 - 23176937 tgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggc--agaggttgc-----agtgagccgagatcacaccactgcactccagcctggtcgac-agaacgagactgcgtct-caaaaa----------------------------aaaaaaaaa----- i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59787894 143 + 198365852 cacctgtaatcccagctattcaggaggctgaggcaggagaattgcttgaacctgggaggt--ggaggttgc-----agtgagccaagatcatgccactgcactccagcct-ggtgac-agagcaagactctgtct-caaaaaaa--------------------------ataaaataa----- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127706182 141 - 192294377 tgcctgtaatctcagctactcaggaggctgaggc---agaattgcttgaaccttggaggc--agaggttgc-----agtgagccaagatcataccactgcactatagcctgggtgac-agagcgagactgtgtct-caaaaaaa--------------------------aaacaaaaa----- i macFas5.chr3 C 0 I 304 s papAnu2.JH684865 50658 151 - 317753 tgcctataatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagagaggttgcagtgtagtgagccgacatcatgccactgcactccagcctgggcgac-agagcgagactgcgtct-caaaaaaa--------------------------aaaaaaaaa----- i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124162920 142 - 127223203 tgcctgtaatctcagctactcaggaggctgaggc---agaattgcttgaacctgggaggc--agaggttgc-----agtgaaccaagatcataccactgcactagagcctgggcgac-agagcgtgactgtgtctacaaaaaaa--------------------------aaaaaaaaa----- i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445415 176 + 204313951 tgcctgtaatcccacccacttgggagactaaggcaggagaatggcttgaatctaagagaa--ggaggttgc-----agtgagcagagatcgcgccatagcactctagtctggacaacaagagtgaaacttcatct-caaagaaaGCAAGCAAGCAAGCTAATAAGCTAACATAAGAAAATATAT i calJac3.chr2 C 0 C 0 e nomLeu3.chr17 46808393 1249 - 99891981 M a score=600.000000 s hg38.chr17_GL383563v3_alt 30345 2 + 375691 TG s panTro4.chr4 121852169 2 + 193495092 TG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8242697 2 - 23176937 TG i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59788037 1 + 198365852 -a i rheMac3.chr3 C 0 I 1 s papAnu2.JH684865 50809 1 - 317753 -a i papAnu2.JH684865 C 0 I 4 s calJac3.chr2 1445591 2 + 204313951 TA i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124163062 0 - 127223203 C e macFas5.chr3 127706323 304 - 192294377 I e nomLeu3.chr17 46808393 1249 - 99891981 M a score=1122639.000000 s hg38.chr17_GL383563v3_alt 30347 539 + 375691 ---GGTGAC------aaagtaataataggaggtctttcattt----------atcacacagaaaataacttgttaaattataata-cctgtgtgggcgaaggtgcagtgaaatggccattttcttgtagtattagtggtgtttaaaatgtatataagccttccagcataaagcttggaaaTTTtttttaaatcctacagacagtgactcattatactgcctcctccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tgcaggctgacagccaccatgcctgaaagctttgcaatttacattgagggtaataagaatgctcatgccctgtgactcacagtaatctcacttctggaaatttcacctttggatataattcaacctaaacaaaaggtcatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCTTTTTTTTAaaaaa-tatggaatgcttcacaaatttgc-atgtcattctttcacagaggccgtgccaatctctctattgttccaacttaagtatgtgtgcta s panTro4.chr4 121852171 539 + 193495092 ---GGTGAC------AAAGTAATAATATGAGGtctttcattt----------atcacacagaaaataactcgttaaattataata-cctgtgtgggcgaaggtgcagtgaaatggccattttcttgtagtattagtggtgtttaaaatgtatataagccttccagcataaagcttggaaaTTTtttttaaatcatacagacagtgactcattatactgcctcctccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tacaggctgacagccaccatgcctgaaagctttgcaattcacatcaagggtaataagaatgctcatgccctgtgactcacagtaatctcacttctggaaatttcatctttggatataattcaacctaaacaaaaggtcatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCTTTTTTTAAaaaaa-tatggaatgcttcacaaatttgc-atgtcattctttcacagaggccgtgccaatctctctattgttccaacttaagtatgtgtgcta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8242699 543 - 23176937 ---GGTGAcaaagtaaaagtaataatatgaggtctttcattt----------atcacacagaaaataacttgttaaattataata-cctgtgtgggcgaaggtgcagtgaaattgccattttcttgtagtattagtggtgtttaaaatgtacataagccttccaggataaagcttggaaattttttttaaatcatacagacagtgactcattatactgcctcctccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tacaggctgacagccaccatgcctgaaagctttgcaatttacatcaagggtaatgagaatgctcatgccctgtgactcacagtaatctcacttctggaaatttcatctttggatgtaattcaacctaaacaaaaggtcatatgcacaaACACAGTGAAAATCTGGGAGTAATTTTTT--TTCTTTTTTTAaaaaa-catggaatgcttcacaaatttgc-atgtcattctttcacagaggccatgccaatctctctactgttccaacttaagtatgtgtgcta i ponAbe2.chr4_random C 0 C 0 s rheMac3.chr3 59788039 554 + 198365852 ---agtgac-aaatgaaaa---tagtatgaggtcttttatttattaaaaataattaaacagaaaataacttgttaaattataataccctgtgctggcaaaggtgcagtgaaatgcgcattttcttatcctattggtgatgtttaaattgtatataagccttccagggtaaagcttagcaatTTTTTAAAAATAAtatagacagtgactcactatactgcctcctccaactcctggcctcaagcaatcctcccacctcaacctcccaaagtgctgggat--tataggccgacagccaccATGACTgaaagctcagcaatttgcatcaagtgtaataagaatgctcatgccctgtgactcacagtaatctcacttttggaaataccatctttggatataattcaatctaaacaaaagctcatacgcacaaaCACAGTGAAAATCTCGGAGTATTTTTTTTTTCTCTTTTTAAAaaaattgcggaatgcttcacaaatttgcaatgtcattcttgcacagaggccatgccaatctctctattgttccaactttagtatatgtgcta i rheMac3.chr3 I 1 C 0 s macFas5.chr3 127706627 533 - 192294377 ---ggtgac------aaag---taatatgaagtcttttattt----------atcacacagaaaataacttgttaaattataata-cctgtgccagtgaaggtgcagtgaaatggccattttcttgtactatcagtgctgtttaaattgtatacaaaccttccaggataaagcttggaaatttttttaaaataatacagacagtgactcattatactgcctcctccaactcctggcctcaagcagtcctcccacctcagcctcccaaagtgctggaat--tataggctgacagccaccatgcctgaaagcttggcaatttacatcaagggtaataagaatgcacatacc--gtcactcacagtaatctcacttccggaaatatcatctttggatataattcaacctaaacaaaaggtgatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCATTTTTTAaaaaa--tatggaatgcttcacaaatttgc-atgtcattctttcacagaggccatgccaaactctctattgttccaacttaagtacatgtgcta i macFas5.chr3 I 304 C 0 s papAnu2.JH684865 50814 528 - 317753 ---ggtgac------ataG---TAATATGAGATCTTTTATTT----------ATCATACAGAAAATAACTTGTTA------AATA-CATGTGCCTGTGAAGGTGCACTGAAATGGCCATTTTCTTGTAGTATTAATGGTGTTTAAACTGTATATAAGCCTTCCAGGATAAGgcttggaaattttttta----aatacacacagtGATTCATTATACTGcctcctccaactcctggcttcaagcaatcctgccacctcagcctcccaaagtgctggaattatataAGCtgacagccaccatgcctgaaagCTCGGCAATTTACATCAAGGGTAATAAGAATGCTCATATCCTGTGATTCACAGTAATCTCACTTCTGGAAATATCATCTTTGAATATAATTCAACCTAAACAAAAGGTCATATGCACAAACACAATGAAAATCTgggagtaatttttttctttttttttaaaaaaa-tatgtaatgcttcacaaatttgc-atgtcattCTTTCACAGAGGCCATGCCAATCTCTCTATTGTTCCAACTTAAGTACATGTGCTA i papAnu2.JH684865 I 4 C 0 s chlSab2.chr21 124163062 535 - 127223203 ---ggtgac------aaag---taatatgaagtcttttattt----------atcacacagaaagtaacttgttaaattataata-cctgtgccagtgaaagtgcagtgaaatggccattttcttgtactatcagtggtgtttaaattgtatataaaccttccgggataaagcttggaaatttttttaaaataatacagacagtgactcattatactgcctcctccaactcctggcctcaagcaatcctcccacctcagcctcccaaagtgctggaat--tataggctgacagctgccatgcctgaaagcttggcaatttacatcaagggtaataagaatgctcataccctgtcactcacagttatctcacttccggaaatattatctttggatataattcaacctaaacaaaaggtgatatgcacaaaCACAGTGAAAATCTGGGAGTAATTTTTTTCTCATTTTTTAaaaaa--tatggaatgcttcacaaatttgc-atgtcattctttcacagaggccatgccaaactctctattgttccaacttaagtacatgtgcta i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1445593 541 + 204313951 AAATGTGACAAAAATAAAG---CAATATGAGGTCttttatttattaaaaataatcaaacaaaaaataactttttaaGTTataataccctgtgccggcaaaggtgcagtgaaatgagcattttcttatactattagtggtgtttaaattgtatataagccttccagcgtaaagcttggaaatTTTACAAAAATTG---ATACAGTTACTCACTATAGAGCCTCCCCCaactcctggcctcaagcaatcctcccacctcagcctcccaaagtggtggaat--tataggccgacagccaccatgcctgAAAGCTGGGCAATTTACATCAAGTGTAATAAGAATACTAATGCCTTGTGACTCACAGTAGTCTCATTTCTGGAAATATCAACTATGGATATAATTCAACCTGTTTCAAAAGTCACATGCACAAACACA-----------GGAGTAATATTTTTCTCTGTTTTAAaaaca--tatggaatgcttcacaaatttgc-atgtgattcttgcacagaggccatgccaatttttctattgttccagcttcagtatatgtgcta i calJac3.chr2 C 0 C 0 e nomLeu3.chr17 46808393 1249 - 99891981 M a score=196657.000000 s hg38.chr17_GL383563v3_alt 30886 72 + 375691 ctgaggcaagcaTGAGTAATTTAAGATAGGGTGGTTAAGTGAAATAAGGAAGAATTATGGAGAATTT-AAAAA s panTro4.chr4 121852710 72 + 193495092 ctgaggcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAATTATGGAGAATTT-AAAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8243242 72 - 23176937 ctgaggcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAATTATGGAGAATTT-AAAAA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46809667 72 - 99891981 CTGAAGCAAGCATGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGTTACGGGGAATTT-AAAAA i nomLeu3.chr17 M 1249 C 0 s rheMac3.chr3 59788593 61 + 198365852 ccgaagcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGAT------------AAAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127707160 73 - 192294377 ctgaagcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGATATGGGGAATTTAAAAAA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 51342 72 - 317753 CTGAAGCAAGCATGAGTAATTTAAGATAGAgtgattaagtgaaataaggaagAGTTATGGGGAATTT-AAAAA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124163597 72 - 127223203 ctgaagcaagcaTGAGTAATTTAAGATAGAGTGGTTAAGTGAAATAAGGAAGAGATATGGGGAATTT-AAAAA i chlSab2.chr21 C 0 I 3475 s calJac3.chr2 1446134 71 + 204313951 ctgaagcaagcaTGAGTAATTTAAGATCGAGCGGGTAAGTGAAAGAAGAAAGAGTTATGGGAAATTA-TAAA- i calJac3.chr2 C 0 C 0 a score=395352.000000 s hg38.chr17_GL383563v3_alt 30958 150 + 375691 TCTATGCTATTTATAggcacctagtaacagctcagtaaatattagctgctactattATTATTTTTATGGTAATTTCACTCAATTAAAAACTGTCGTTAAAAATTACCATTGTCATGGAACATAATGTCTCCTACTGTATAATTGTAGAAA s panTro4.chr4 121852782 150 + 193495092 TCTATGCTATTTATAGGCACCTAGTAACAGCTCAGTAAATATTAGCTGCTACTATTATTATTTTTATGGTAATTTCACTCAATTAAAAACTGTCATTAAAAATTACCATTGTCATGGAACATAATGTCTCCTACTGTATAATTGTAAAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8243314 147 - 23176937 TCTATGCTATTTATAggcacctagtaacagctcagtaaatattagctg---ctattattATTTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACCATTGTCATGGAACATAATGTCTCCTACAGTATAATTGTAAAAA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46809739 150 - 99891981 TCTATGGTATTTATAggcacctagtaacagctcagtaaatattagctgctactattATTATTTTTATGGTAATTTCACTCAGTTAAAAATTGTTATTAAAAACTAACATTGTCATGGAATGGAATGTATCCTACAGTATAATTGTAAAAA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59788654 135 + 198365852 TCTGTGGTACTTATAGGCACCTAGTAACAGCTCAGCAA---------------ATTATTATTTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACCATTGTCATGGAACATAATGTATCCTACAGTATAATTGTAAAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127707233 135 - 192294377 TCTGTGGTACTTATAGGCACCTAGTAACAGCTCAGCAA---------------ATTATTATTTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACCATTGTCATGGAACATAATGTACCCTACAGTATAATTGTAAAAA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 51414 150 - 317753 TCGACGGTATTTATAGGTACCTAGTAatagctcagtaaatattagctgctactattactatttttatggTAATTTCACTCAAttaaaaattgtcattaaaaATTACCATTGTCATGGAACATAATGTATCCTACAGTATAATTGCAAAAA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124167144 135 - 127223203 TCTATGGTACTTATAGGCACCTAGTAACAGCTCAGCAA---------------ATTATTATTTTTATGGTAATTTCACTCAATTAAAAATTGTCATTAAAAATTACCATTGTCATGCAACATAATGTATCCTACAGTATAATTGTAAAAA i chlSab2.chr21 I 3475 C 0 s calJac3.chr2 1446205 150 + 204313951 TCAATGCTATTTATAGGTACCTAGTAACAGCTCAGAATATATTAGCTGCTACTTTTATTCTTTTTATGGTAATTCCACTTCATTAAAAATTGTCATTAAAAATTACCACTGTCATGGAACATCCTGTATTTAACAGTATAATTGTAAAAA i calJac3.chr2 C 0 I 680 a score=1026019.000000 s hg38.chr17_GL383563v3_alt 31108 381 + 375691 CAGATACAATttgtcccttggtatatggggggattagttccagctctcccatttctgtgtataccaaaatccacgcatactcaagttttcgaagtcagtcctgtggaatccacata-taACACAAATGGGaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacttgtgaggctgaggcaggaggattgcttgagcccaggaggttgaggctgcagtgagccataattgcaccactgcactccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAATAGAATTTTTCTGTTCACTTGAAGATATGGTCAGGATTGTGGCATATGAAAATTCTTCATAAAATAACTATCTAATCCAATTAATGCTG s panTro4.chr4 121852932 381 + 193495092 CAGATACAATttgtcccttggtatatggggggattagttccagctctcccatttctgtgtataccaaaatccacgcatactcaagttttcgaagtcagtcctgtggaatccacata-taACACAAATGGGaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacttgtgaggctgaggcaggaggattgcttgagcccaggaggttgaggctgcagtgagccataattgcaccactgcactccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAGTAGAATTTTTCTGTTCACTTGAAGATATGGTCAGGATTGTGGCATATGAAAATTCTTCATAAAATAATTATCTAATCCAATTAATGCTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8243461 381 - 23176937 CAGATACAATTAgtcccttggtatatggggggattagttccagctctcccatttctgtgtataccaaaatccatgcatactcaagttttcgaagtcagtcctgtggaatccacata-taACACAAATGGGaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacttgtgaggctgaggcaggaggattgcttgagcccaggaggttgaggctgcagtgagccataattgcaccaccgcactccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAATAGAAGTTTTCTGTTCACTTGAAGATATGGTCAGGATTGTGGCATATGAAAATTCTTCATAAAATAACTATCTAACTCAATTAATGCTG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46809889 382 - 99891981 TAGATACAATttgtcccttggtatatggggggattaattccagctcccccatttctgtgtataccaaaatccatgcatactcaagtttttgaagtcagtcctgtggaatccacatcttaaaaaaaatgggaaaattagtgaggtgtggtgacaagcacccgtagtcccagctacttgtgaagctgaggaaggaggactgcttgagcccaggaggttgaggctacagtgagccataagtgcaccactgcagtccagtctgggcaacagagtgagacAGAAGGTTGACTTTTTAATCGAATTTTTCTGTTCACTTGAAGATACGGTCAGGACTGTGGCATACGAAAATTCTTCATAAAATAACTATCTAATCCAATTAATGCTG i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59788789 298 + 198365852 CAGATACAATTTGTCCCTTGGCATATGGGGGGATTAGTTCCAGCTACC------------------------------------------------------------------------------------aattagcgaggtgtggtgacaagcacttgtagtcccagctacttgtgaggctgagtcaggaggattgcttgagcccaggagattgaggctgcagtgagccataattgcaccgctgcactccattctgggcaatagagtgagacAGAAGGTTGACTGTTTAATAGAATTTTTCTGTTGACTTGAAGATATAGTCAGGACTGTGGCATATGAAAATTCTTCATAAGATAATTATCTAATCCAATTAATCCTG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127707368 381 - 192294377 CAGATACAATttgtcccttggtatatggggagattagttccagctaccccatttctgtgtataccaaaatccatgcgtactcaagttttcaaagtcagtcctgtggaatccaaata-tTTaaaaaatggaaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacctgtgaggttgaggcaggaggactgcttgaacccaggaggttgaggctgcagtgagccataattgcaccactgcagtccagtctgggcaacagagtgagacAGAAGGTTCACTTTTTAATAGAATTTTTCTGTTCACTTGAAGATATGGTCAGGACTGTGGCATAGGAAAATTCTTCATAAAATAACTATCTAATGCAATTAATGCTG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 51564 363 - 317753 CAGATACAATTTGTCCCTTGGTATGTGGGGGGATTAGTTTCAGCTCCCCCATTTCTGTGTATACCAAAATCCAAGCATACTCAAGTTTTCAAAGTGAGTCCTGTGGAATCC-CACa-caaaacaaatgggaaaatgagTGAGGGGTGGTGACaagcacctggagtcccagctacttgtgag-----------------gcttgagcccaggaggttgaggctgcagtgagccataattgcaccactgcactccagtatgggcaacagagtgagacagaagGTTGACTTATTAATAGAATTTTTCTGTTCACTTGAAGATATGGTCAGGATTGTGGCATAGGAAAATTCTTCATAAAATAACTATCTAGTGCAATTAACACTG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124167279 381 - 127223203 CAGATACAATttgtccattggtatatggggggattagttccagctaccccatttctgtgtataccaaaatccatgcgtactcaagtttttgaagtcagtcctgtggaatccaaata-tTTaaaaaatggaaaaattagtgaggtgtggtgacaagcacctgtagtcccagctacctgtgaggttgaggcaggaggactgcttgagcccaggaggttgaggctgcagtgagccataattgtactactgcagtccagtctgggcaacagagtgagacAGAAGGTTCACTTTTTAATAGAATTTTTCTGTTCACTTGAAGATAAGGTCAGGACTGTGGCATAGGAAAATTCTTCATAAAATAACTATCTAATGCAATTAATGCTG i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1447035 378 + 204313951 CAGATACAATttgtttcttggtgtatggggggattggttccagttcctccatttctgtgtataccaaaatccatgcatattcaagttttcgaagtcagacctgtggaatccacata-taGGaaaaattagaaaactagtaaactgtggtgacaagcatctctagttgcagctacttgtgaggcagaggc---aggactgcttgagcccagaaggttgaagctgcagtgagccataactgtaccactgcactcccatctgggcaacagagtgagacAGAAGGTTGACTTTTTAATAGAATTTTTCTATTCACTTAAAGATATGGTCAGGATGGTGGCAGATGAAAATTCTTCATACAATAATTATCTAATCCAATTAATGCCG i calJac3.chr2 I 680 I 14456 a score=30461.000000 s hg38.chr17_GL383563v3_alt 31489 13 + 375691 GAATTGGGAACAG s panTro4.chr4 121853313 13 + 193495092 GAATTGGGAACAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8243842 13 - 23176937 GAATTGGGAACAG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46810271 13 - 99891981 GAATTAGGGACAG i nomLeu3.chr17 C 0 I 71 s rheMac3.chr3 59789087 13 + 198365852 GAATTGGGAACAG i rheMac3.chr3 C 0 I 74 s macFas5.chr3 127707749 13 - 192294377 GAGTTGGGGACAG i macFas5.chr3 C 0 I 71 s papAnu2.JH684865 51927 13 - 317753 GAATTGGGAACAG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124167660 13 - 127223203 GAGTTGGGGACAG i chlSab2.chr21 C 0 I 71 e calJac3.chr2 1447413 14456 + 204313951 I a score=6111.000000 s hg38.chr17_GL383563v3_alt 31502 3 + 375691 CAG s panTro4.chr4 121853326 3 + 193495092 CAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8243855 3 - 23176937 CAG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46810355 3 - 99891981 CAG i nomLeu3.chr17 I 71 C 0 s macFas5.chr3 127707833 3 - 192294377 CAG i macFas5.chr3 I 71 C 0 s papAnu2.JH684865 51940 3 - 317753 CAG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124167744 3 - 127223203 CAG i chlSab2.chr21 I 71 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59789100 74 + 198365852 I a score=325160.000000 s hg38.chr17_GL383563v3_alt 31505 137 + 375691 AAGTGTCATCTCAGAGCTACTCGCAATGAAAGGTGATGTCTGGGGCTCAGGTGTGTTGAGGTCCCCATGCCTGGACTATGGGTGCTGAGTGGGATTTACTTGTCCATCCATTTTCTATATTCCAGCACTGGGAAACT s panTro4.chr4 121853329 137 + 193495092 AAGTGTCATCTCAGAGCTACTCACAATGAAAGGTGATGTCTGGggctcaggtgtgttgaggtccccatgcctggactatgggtgctgagtgggatttacttgtccatccattttctatattccagcactgggaaact i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8243858 136 - 23176937 AAGTGTCATCTCAGAGCTACTCACAATGAAAGGTGATGTCTGGGGCTCAGGTGTGTTGAGGTCCCCATGCCTGGACTATGGGTGCTGAGTGGGATTTACTTGTTCAT-CATTTTCTATATTCCAGCACTGGGAAACT i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46810358 137 - 99891981 AAGTACCATCTCAGAGCTACTCACAATGAAAGGTGATCTCTGGGGCTCAGATGTGTTGAGGTCTCCATGCCTGGGATATAGGTGGTGAGTGGGACTTACTTGTCTATCCATTTTCTATATTCCAGCACTGGGAAACT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59789174 137 + 198365852 AAGTGTCATCTCTGAGCTACTCACAATGAAAGGTGATGTCTGGggcccaggtgtattgaggtccccatgtctgggttatgggtgctgtgtgggacttacttgtccatccattttctgtattctggcactgggaaact i rheMac3.chr3 I 74 I 89 s macFas5.chr3 127707836 137 - 192294377 AAGTGTCATCTCAGAGCTACTCACAATGAAAGGtgacgtctggggctcaggtgtgttgaggtccctatgcctgggctatgggtgctgagtgggacttacttgtgcatccattttctctattccagcaccaggaaact i macFas5.chr3 C 0 I 79 s papAnu2.JH684865 51943 137 - 317753 AAGTGTCATCTCAGAGCTACTCACAATGAAAGGTGATGTCTGGGGCTCACGTGTGTTGAGGTCCCCATGCCTGGGCTATGGGTGCTGAGTGGAACTTACTTGTCCATCCATTTTCTATATTCCAGCACTGGGAAACT i papAnu2.JH684865 C 0 I 79 s chlSab2.chr21 124167747 137 - 127223203 AAGTGTCATCTCAGAGCTACTCACAATGAAAGGTGATGTCTGGggctcaggtgtgttgaggtccccatgcctgggctatgggtgctgagtgggacttacttgtccatccattttctctagtccagcaccaggaaact i chlSab2.chr21 C 0 I 79 e calJac3.chr2 1447413 14456 + 204313951 I a score=6627.000000 s hg38.chr17_GL383563v3_alt 31642 10 + 375691 AGGG-------------------------------------------------------------------------------ACAGTA s panTro4.chr4 121853466 89 + 193495092 agggtttatccatcttgataagatgtcatttaaattccacttcgcaagaacCACAAATGGAAGAAAGGCCATGAAACCGCAGGACAGTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8243994 89 - 23176937 AGGGTTTATCCATCTTGATAAGATGTCATTTAAATTCCACTTCACAAGAACGACAAATGGAAGAAAGGTCATGAAACCACAGGACAGTA i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46810495 89 - 99891981 AGGGTTTATACATCTTGATAAGATGTCATTTAAATTCCACTTGGCAAGAACCGCAAATGGAAGAAAGGCCATGAAACCACAGGACAGTA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127708052 10 - 192294377 -------------------------------------------------------------------------------CAGGACAGTA i macFas5.chr3 I 79 C 0 s papAnu2.JH684865 52159 10 - 317753 -------------------------------------------------------------------------------CAGGACGGTA i papAnu2.JH684865 I 79 C 0 s chlSab2.chr21 124167963 10 - 127223203 -------------------------------------------------------------------------------CAGGACAGTA i chlSab2.chr21 I 79 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59789311 89 + 198365852 I a score=2047013.000000 s hg38.chr17_GL383563v3_alt 31652 935 + 375691 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGGCTCTGTAAAAGAGAAATTACATCATTGAAAAATCGTCGCAggtcaggtgaggtggctcatacctataatcccagcccactgggagactaaggcaggaggattccgtgaggccaggagttcaagaccag--------cctgagcaacacagtgaaacctcatctctacaaaaaattagaaaatgaactgggtgtggtaaaacattcgtatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtggaagctgcagtgagctctgatctcaccactgcactctagccttggtgacagagtgagaccctgtctc------aaGac--acacacaaacacacacacacacacacacac---------------------------------------CCAATCTCACTCTGTCCAGCCTT--GACTAATCAAAAGGGCCTTCT-GGTTACAGAAGAGGTATGCTCTTTTGTAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGACTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGGAAATGGAGTCTCTGGGAAAATGACCTAAATCTTTGGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACATCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCTAAGACCCTGACCAATGCATGGAACATGAAAAACTGAAGTTTAActgggcgcggtggatcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaaaagttctagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagttgggcatggtggtggacacctgtaatcccagctacttgggaggctgaggcaggaaaattgcttgaacccggaaggcggaggttgcagt s panTro4.chr4 121853555 951 + 193495092 CTTGTTCTCAAGGGACTCTTCAGCTTAGGTGGTTCTGTAAAAGAGAAATTACATTGTTGAAAGATCGTCGCAggtcaggtgaggtggctcatacctataatcccagcccactgggagactaaggcaggaggattccgtgaggccaggagttcaagaccag--------cctgagcaacacagtgaaacctcatctctacaaaaaattagaaaatgaactgggtgcggtaaaacattcgtatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaggtggaagctgtagtgagctctgatctcaccactgcactccagcctgggtgacagagtgagaccctgtctc------aaGac--acacacacacacacacacacacacacacac----------------------acacacacacacac-CCCCAATCTCAGTCTGTCCAGCCTT--GACTAATCAAAAGGGCCTTCT-GGTTACAGAAGAGATATGCTCTTTTGTAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGACTCTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGGAAATGGAGTCTCTGGGAAAATGACCTAAATCTTTGGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACATCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCTAAGACCCTGACCTATGCATGGAACATGAAAAACTGAAGTTTAActgggcgcggtggatcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggtcaaaagttctagatcagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagttggtcatggtggtggacaactgtaattccagctactcgggaggctgaggcaggaaaatcgcttgaacctggaaggcggaggttgcagt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8244083 960 - 23176937 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGGCTCTGCAAAAGAGAAATTACATTGTTGAAAAATCGTTGCAggtcaggtgaggtggctcatacctataatcccagcccactgggagactaaggcaggaggatcccgtgaggccaggagttcaagaccag--------cctgagcaacacagtgaaacctcatctctacaaaaaattagaaaatgaactgggtgcggtaaaacattcgtatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtggaagctgcagtgagctctgatctcaccactgcactccagcctgggtgacacagtgagaccctgtctc------aaGacagacacacaaacacacacacacacacacacacacacac----------------acacacacacacac-CCCTAATCTCAGTCTGTCCAGCCTT--GACTAATCAAAGGGGCCTTCTGGGTTACAGAAGACGTATGCTCTTTTGTAGGACAGGGAGAAACCAGCAAGCTTGTTCACAGACTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCTCACAGTGGAAATGGAGTCTCTGGGAAAACGACCTAAATCTTTGGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAGATCCAGGGAGTTCTGCTAGAATGAATCACTCCCTAAGACCCTGACCTATGCATGGAACATGAAAAACTGAAGTTTAActgggcacggtggatcgcacccgtaatcccaacactttgggaggctgaggcaggtggatcacctgaggtcaaaagttctagaccagcctggccgacatggtgaaaccccatctctactaaaaatacaaaaattagttgagcatggtggtggacgcctgtaatcccagctactcgggaggctgaggcaggaaaatcgcttgaacctggaaggcggaggttgcagt i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46810584 911 - 99891981 CTTGTTCTCAAGGGAATCTTCAGCTTAGGTGACTCTGTAAAAGAGAAATTACATTGTTGAAAAATCATCGCAGGTCATTTGAggtggctcatacctataatcccagcccactgggagactaaggcaggaggatcccctgaggccaggagttcaaggccag--------cctgggcaacacagtgaaatctcatctctacaaaaaattagaaaatgagctgggtgtggtaacacattcctatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaggaagtggaagctgcagttagctctgatctcaccactgcactccagcctgggtgacagagtgacaccctgtctc------aaCAT--------------ACACACACCCACACACAC--------------------------------------CCTCATCTCAGTCTGTCCAGCCTT--GACTAATCAAAAGGGTCTTCT-GGTTACAGAAGAGGTATGCTCTTTTGTAGGACAGGGAGAGACCAACAAGCTTGTTCACAGCCTTTTCCTCATCCTTTGCTTAGTTTTCCAAGAACCCTCATAGTGGAAACAGAGTCCTTGAGAAAATGACCTAAATCTTTAGGTTACCAGGGGAGAATTATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCTAAGACCCTGACCTATGCAGGGAACATGAAAAACTGTAGTTTAActgggcacggtggatcatgcctgtaatcccagcactttgggaggccgacgcaggtggatcacctgaggtcaaa-------------cctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtagtggtggacgcctgtaatcccagctactcgggaggctgaggcagggaaattgcttgaatctggaaggcggaggttgcagt i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59789400 976 + 198365852 CTTGTTCTCAAGGTAATATTCAGCTTAGCTGGTTCTGTAAAAGAGGAATCACATTGTTGAAAACTCACCGCAggtcagctgaggtggtccatacctataatcccagcccatcagaagactaaggcaggaggatcctgtgaggccaggagttcaagaccag--------cctgggcaacacagtgaa-----atctctacaaaaaattagaaaatgagctgggtgcggtggcactttcctatagtcccagctactctggaggccgaagtgggaggatgaaagtggaagctgcagaagtggaagctgcagtgagctctgatctcaccgttgcactccagcctgggtgacagagtgagaccctgtctcaacatatacat--acatacatacacacacacacacacacacacgcatgcacacagccacatgcagacacacacacacacacCCTCATCTCAGTCTGTCCAGACTTTAGACTAAAGAAAAGGGTCTTCT-GGTTACAGAAGAGGTATGCTCTTTTGTGGGACAGGGAGGGACCAGCAACTTTGTTCACGGTCTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACCCGCACAGTGGAAACAGTGTCT---GGGAAAGGACCAAAATCTTTAGACTACCAGGGGAGAAATACACCTCCTTTGTCAATTAATAAATAGAACACCTGCCTTAAAAGCCAGGGAGTTCTGCTAGAATGAATCACTCCCTACGACCCTGACCTATGCAGGGAACATAAAAAACTGGAGTTTggctgggcacagtggctcacacctgtaattctagcactttgggaggccgaggcgg-cggaccacctgaggtcaggagttcgagacaagcctggccaacatggtgaaaccctatctctactaaaaatacaaaaattagctgggtgtggtagtggatgtgtgtaatcccagctacttaggaggcagaggcaggaaaatcacttgaacccaggaggcagaggttgcagt i rheMac3.chr3 I 89 I 47450 s macFas5.chr3 127708062 945 - 192294377 CTTGTTCTCAAGGGAATCTTTAGCTTAAGTGGCTCTGTAAAAGAGAAAGTATATTGTTGAAAAATCATTGCAggtcaggtgaggtggctcatacctataatgccag-ccactgagagacaaaagcaggaggatcccatgaggccaggagttgaagaccagtgaaatctcttgggcaacacagtgaaaactcatctctacaaaaaattagaaaatgagctgggtgtggtaacacattcctatactccacgctactctggaggctgaaataggaggat---cgcttgagcccaggaagtagaagctgcagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctc------Tacac--acacacacacacacacacacacacacacac----------------------acacacacacacacacCCTCATCTCAGTCTGCCCAGCCTT--GACTAATCAAAAGGGTCTTCT-GGTTACAGAAGAAGTATGCTCTTTTATAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGCCTTTTCCTCATCCTCTGCTTAG-TTTCCAAGAACCCTCACAGTGAAAACAGAGTCCCTGGGAAAACAACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCCTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCTAAGACCTTGACCTATGCAGGAAACATGAAAAACTGGAGTTTAAccaggcgcggtggctcacgcctgtaatcccagtactttgggaggccgaggcggatggatcatctgaggt-------------caaacctggccaacatggtgaaaccccgcctctactaaaactacaaaaattagctgggcgtggtggtggacgcctgtaatcccagctactccagaggctgaggcaggaaaatcacttgaacccagaaggcggaggttgcaat i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 52169 934 - 317753 CCTGTTCTCAAGGGAATCTTTAGCTTAGGCGGCTCTGTAAAAGAGAAAGTACATTGTTGAAAAATCATtgcaggccaggtgaggtggctcataccgataatcccag-ccactgggagacaaaggcaggaggactccgtgaggccaggagttcaagaccag--------cctgggcaacacagtgaaacctcatctccacaaaaaactagaaaatgaacTGGGTGTGGTAACacattcctatagtcccagctactctggaggctgaaataggaggat---cgcttgagcccaagaagtggaagcttcagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctc------------------------aacacacacacacacaca-----------------------aaacacacacacacaccctcatctCATTCTGCCCAGCCTT--GACTAATCAAAAGGGTCTTCT-GGTTACAGAAGAGGTATACTCTTTTGTAGGACAGGGAGAGACTAGCAAACTTGTTTACAACCTTTTCCTCATCCTCTGCTTAGTTTTCCAAGAACTCTCACAGTGGAAATGGAGTCCCTGAGAAAACGACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCCTTTGTTAATTAATAAATGGAACGCCTGCCTTAAAATCCAGGGGGTTCTGCTAGAATGAATCTCTACCTAAGACCCTGACCTATGCAGGGAACATGAAAAACTGGAGTTtaaccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggattacctgaggtcaaaagttctagatcagcctggccaacatggtgaaaccccatctctaccagaaatacaaaacttagctgggcgtggtggtggacgcctgtaatcccaactactcaggaggctgaggcaggaaaatcgcttgaacctggaaggcggaggttgcagt i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124167973 931 - 127223203 CTTGTTCTCAAGGGAATCTTTAGCTTAGGTGGCTCTGTAAAAGAGAAAGTACATTGTTGAAAAATCATTGCAggtcaggtgaggtggctcatacctataatgccag-ccactgagagacaaaggcaggaggatcccgtgaggccaggagttcaagaccag--------cctggacaacacagtgaaacctcatctctacaaaaaattagaaaatgagctgggtgtggtaacactttcctatactccaagctactctggaggctgaaataggaggat---cacttgagcccaggaagtagaagctgcagtgagctctgatctcaccacagaactccagcctgggtgacagagtgagaccctgtctc--------------aacacacacacacacacacacacacacac----------------------acacacacacacacacacTCATCTCAGTCTGCCCAGCCTT--GACTAACCAAAAGGGTCTTCT-GGTTACAGAAGAGGTATGCTCTTTTATAGGACAGGGAGAGACCAGCAAGCTTGTTCACAGCCTTTTCCTCATCCTCTGCTTAG-TTTCCAAGAACCCTCACAGTGAAAACAGAGTCCCTGGGAAAACAACCTAAATCTTTAGGTTACCAGGGGAGAAATATGCCTCTTTTGTCAATTAATAAATGGAACACCTGCCTTAAAATCCAGGGAGTTCTGCTAGAATGAATCACTCCCTAAGACCCTGACCTATGCAGGGAACATGAAAAACTGGAGTTTAAccagacgcggtggctcacgcctgtaatcccagtacttcggaaggccgaggcagatggatcatctgaggt-------------caaacctggccaacatggtgaaaccccgcctctactaaaactacaaaaattagctgggcgtggtggtggacgcctgtaatcccagctactccagaggctcaggcaggaaaatcgcttgaacccagaaggcggaggttgcaat i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1447413 14456 + 204313951 I a score=2210960.000000 s hg38.chr17_GL383563v3_alt 32587 1316 + 375691 TACTTCTAGAAGAATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATGAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACAGTTCGACTGGGAAGTGAGGAGAGAATTTATTACTC-AAAACCAAAGGGAAATGAAAAGAGGCCAACATAGAA-TGTCATTATTCTTTCTTGGCGGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATTTGCTTCGGCAAATCTTATGCAGAGCCATCTCCAGGCTCCAGAAACAATAGGCTATAAATTACTGGATCTCCCATTTGATACAACGAAGTATGAGCATGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGAAGTGAATTTGATACAAGAACTGGAGCGAGGGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTCTAGTTCCAGAACCCAAGTAGAGGATGGGGAAACAAGGCTCCTGACTTTTTTTCCCTAATGTCT-GCATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTCAACTGAAATAACTAAATGATTAAACCCTATACAGAGAATCTCCAAAGACTGACAAAATATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACC-AGTGATCTACAATATTTGGGATCATTCCAAATTCCCATCAAGGATCTGCCTATATCAACAAAGGAGCCAAGGACCAACCATTCAAATGGGCCCTGCTGCCAAGCCTTTTTTTTTTTTT----TAACAATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCCTTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGACCCATGAATTGCAACAGGAAAGAAAAGACAGAGAATTAGTCAGACAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGACAGGCCTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTTCGAGCCCAGGAAGCAGCAGTAAATCATTAAAGAACAGATAAGTTCTTAAGGTGA-GGGAGAGTTTCAGATAAATGG s panTro4.chr4 121854506 1314 + 193495092 TACTTCTAGAAGAATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATGAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACAGTTCAGCTGGGAAGTGAGGAGAGAATTTATTACTC-AAAATCAAAGGGAAATGAAAAGAGGCCAACATAGAA-TGTCATTATTCTTTCTTGGCGGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATTTGCTTCAGCAAATCTTATGCAGAGCCATCTCCAGGCTCCAGAAACAATAGGCTATAAATTACTGGATCTCCCATTTGATACAATGAAGTATAAGCACGGTCCTGAATGACTCCTCTACATACTACTCTGGGTAGCTTGAAGTGAATTTGATACAAGAACTGGAGCGAGCGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTCTAGTTCCAGAACCCAAGTAGAGGGTGGGGAAACAAGGCTCCTGACTTTTTTTCCCTAATGTCT-GCATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTCAACTGAAATAACTAAATGATTAAACCCTATAAAGAGAATCTCCAAAGACTGACAAAATATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACC-AGTGATCTACAATATTTGGGATCATTCCAAATTCCCATCAAGGATCTGCCTATATCAACAAAGGAGCCAAGGACCAACCATTCAAATGGGCCCTGCTGCCAAGCCTTTTTTTTTTTTT------ACAATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCCTTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGACCCATGAATTGCAACAGGAAAGAAAAGACAGAGAATTAGTCAGACAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTGTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGACAGGCCTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTTCAAACCCAGGAAGCAGCAGTAAATCATTAAAGAACAGATAAGTTCTTAAGGTGA-GGGAGAGTTTCAGATAAATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8245043 1315 - 23176937 TACTTCTAGAAGAATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATGAAGGCCAAAGGGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAAAGTCTTTCTAGGGAATACAGACTCCCAAACCGTTCAGCTGGGAAGTGAGGAGAGAATTTATTACTC-AAAATCAAAGGGAAATGAAAAGAGGACAACATAGAATTGTCACTATTCTTTCTTGGCGGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTGGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATTTGCTTCAGCAAATCTTATGCAGAGCCATCTCCAGGCTCCAGAAATAATAGGCTATAAATTACTGGATCTCCCATTTGATATAATGAAGTATAAGCACGGTCCTGAATGACTCTTCTACATACTACTCTGGGTGGCTTGAAGTGAATTTGATACAAGAACTGGAGCGAGCGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCTTCACTACTCACCTATGAGTCCAGTTCCAGAACCCAAGTAGAGGGTGGGGAAAGAAGGCTCCTGAC-TTTTTTCCCTAATGTCT-GCATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTCAACTGAAATAACTAAATGATTAAACCCTATACAGAGAATCTCCAAAGACTGACAAAACATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACC-AA-----TACCATATTTGGGAACATTCCAAATTCCCATCAAGGATCTGCCTATATCAACACAGGAGCCAAGGACCAACCATTCAAATGGGCCCTGCTGCCAAGCCTTTTTTTTTTTTTTTTTTTACAATGCCATCTCTTCATGTTGTTCCATTTAACAAAACTGCAGCCCTTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAATACCATTCAGAAGATGCTAAGACCCATGAATTGCAACAAGAAAGAAAAGACGGAGAATTAGTCAGATAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGACAGGCCTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTTCGAACCCAGGAAGCAGCAGTAAATCATTAAAGAACAGATAAGTTCTTAAGGTGA-GGGAGAGTTTCAGATAAATGG i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46811495 1210 - 99891981 TACTTCTAGAAAAACTTCCAACAGCCGTTTGAAATCCTTCAACATTCATTAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTATGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTCAGGAGAGAATTTATTACTG-AAAATCAAAGGGAAATGAAAAGAGGCCAATCTAGAA-TGTCATTATTCTTTTTTCGGGGGGAATGGATTCCAGAGTCATTTTGTGACCTTTAC-----ATGACCTC---ATTAGCATCTAAAAGCTTCCAATGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCGGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATAATAGGCTATAAATTACTGGATCTCCCATTTGATATAATGAAGTATAAGCACGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGAAGTGAATTTGACACAAGAACTGGAGCGAGTGCAAAGCAGAGCTAGATCTAGGATTAATGCGCTTGGGCCCACCTCCTCACTACTCACC--TGAGTCCAGTTCCAGAATCCAAGTAGAGGGTGGGGAAACAAGGCTCCTGGC---GTTTCCCTAATGTCT-GCATCTCTTTCACATTTTCTTACCTCCTTGCAAAGAAACTAAACAGGCTCGACTGAAATAACTAAATGATTAAACCCTATGCAGAGAATCTCC-AAGATTCACAAAATATCATTCAAGACTGTTACACAGACAACCTTGAGGATGACTTGATGTACC-AGTGATCTACAATATTTGGGATCATTCCAAATTCTCATCAAGGATCTGCCTATATCAACACGGGAGCCAAGGACCAACCATTCGAATGGGCCCTGCTGCCAAGCCTTTTTTTTTTT--------ACAATGCCATCTCTTCATATTGTTCCGTTTAACAAAACTGCAGCCTGTCACCCATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATACTAAGACCCATGAATTGCAACAGG-----AAAGACAGAGAATTAGTCAGACAGGTACATGCTGTGCCCAAAATGCACTACAACCCCCACTTATTTCTGCCTAATCCT--AGCTGGGCTGACACCAGCCTGAT-----------------------------------------------------------------------------------------CAGATAAGTTCTTGAGGTGA-AGGAGAGTTTCAGATAAATGG i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127709007 1299 - 192294377 TACTTCTAG---AATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATTAAGGTCAAAGAGTTGTCACCTAATTTAATCTGATGGGCATGTGATCAGAGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTGAGGAGATAATTTATTACTC-AAAATCAAAGGGAAACGAAAAGAGGCCAACCTAGAG-CGTCATTATTCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTTTGTGACCTTTACCTTCTGTGACCTCCTTATTAGCATCTAAAAGCTTCCAGCATAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATAACAGGCTATAAATTACTGGATCTCCCATTTGATATAATAAAGTATAAGCACGCTCCTGAATGACTCCTCTACATACTACTCTGGGTGACTTGAAGTGAATTTGATTCAAGTACTGGAGCGAGTGCAAAGCAGAGCTAGATCTAGGATCAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCTAAGTAGAGGGTGGGGAAACAAGGCTCCTGGC-TTTTTTCCCTAATGCCTGCCATCTCTTTCAGA-TTTCTTATTTATTTGCAAAGAAACTAAACAGGCTCGACTAAAAAAACTAAATGATTAAACCCTACACAGAGAATCTCCAAAGATTCACAAAATATCATTCAAGACTGTTAGAAAGACAGCCTTGAGGATAACTTGATGTACC-AGTGATCTACAATATTTGGGATCATTCCAAATTCCCGTCAAGGATCTGCCTATATCAACACAGGGACAAAGGACCAACCATTCAAATGGGCCCTGCTGCCAA------------------------AATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCTGTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGTGCCAGAGTATGCTACTCCCTAGTAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGCTAAGGCCCATGAATTGCAACAGGAAAGAAAAGACACATAATTAGTCAGACAGGTACATGCTGGGCCAAAAATGCACTACAACCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGTCAGGCCTACAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTGCAAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATAAGGTCTGGAGGTGAGGGGGGAGTTTCAGATAAATGA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 53103 1304 - 317753 tactTCTAGAATAATTTCCATTAGCCCTTTGAAATTCTTTAACATTCATTAAGGCCAAAGAGTTTTCACCTAATTTAATCTGATGGGTGTGTGACCAGAGTCTTTCTAGGGAATAGAGACTCCCAAAATGTTCAGCTGGGAAGTGAAGAGATAATTTATTACTC-AAAATCAAAGGGAAATGAAAAGAGGCCAACCTAGAA-TGTCATTATTCTTTTTTGGCGGGGAATGGATTCCAGAGTCATTCTGTGACCTTTAC-----ATGACCTCCTTATTAGCATCTAAAAGCTTCCAGTGTAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATGCAGAGCCATCTCCAGACTCCAGAAATCACAGGCTATAAATTACTGGATCTCCCATTTGATATAATGAAGTATAAGCATGGTCCTGAATGACTCCTCTACATACTACTCTGGGTGGCTTGCAGTAAATTTGATACAAGAACCGGAGAAAATGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCCAAGTAGAGGGTGGGGAAACAAGGCCCCTGGC-TTTTTTCCCTAATGTCT-CCATCTCTTTCACA-TTTCTTATCTCCTTGCAAAGAAACTAAACAGGCTcgactaaaataattaaatgattaaaCCCTATGCAGAGAATCTCCAAAGATTCACAAAATATCATTCAAGACTGTCACACAGACAACCTTGAGGATGACTTGATGTACCAAGTGATCTA---------ATATCATTCCAAATTCCCATCAAGGATCTGCCTATATCAACACAGGAGCCAAAGATCAACCATTCAAATGGGCCCTGCTGTCAAGCCTTTTTTATTT---------ACAATGCCAACTCTTCATATTGTTCCGTTTAACAAAAATGCAGCCTGTCATCTACACTTAAGTCCATTGGCCAATGGCACAGAGCCAGAGTATGCTATTCCCTAGCAGGAAATCAACAGGATGACCTACTAAACACCATTCAGAAGATGTTAAGACCCATGAATTGcagcaggaaagaaaagacagataacTAGTCAGCCAGGTACATGCTGTGCCAAAAATGCACTACAGCCCCCACCCAATTCTGCCTAACCCTAGAGCTGGGCTGACACCAACCTGATGAGACAGGCTTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCGTTCGAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATACGTTCTTGAGGTGA-GGCAGAGTTTCAGAAAAATGG i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124168904 1303 - 127223203 TACTTCTAGAAGAATTTCCATTAGCCCTTTGAAATCCTTCAACATTCATTAAGGTCAAAGAGTTATCACCTAATTTAATCTGATGGGTATGTGACCAGGGTCTTTCTAGGGAATAGAGACTCCCAAACTGTTCAGCTGGGAAGTGAGGAGATAATTTATTACTCAAAAATCAAAGGGAAACGAAAAGAGGCCAACCTAAAG-CGTCATTATTCTTTCTTGGCAGGGAATGGATTCCAGAGTCATTCTGTGACCTTTACCTTCTGTGACCTCCTTATTAGCATCTAAAAGCTTCCAGCATAGGATGCAGCCAGCTAGGTTCTCTTCTAATGTAATAAAATCTGCTTCAGCAAAGCTTATACAGAGCCTTCTCCAGACTCCAGAAATAATAGGCTATAAATTACAGGATCTCCCATTTGATATAATAAAGTATAAGCACGCTCCTGAATGACTCCTCTACATACTACTCTGGGTGACTTGAAGTGAATTTGATTCAAGTACTGGAGCAAGTGCAAAGCAGAGCTAGATCTAGGATTAATGTGCTTGGGCCCAGCTCCTCACTACTCACCTATGAGTACAGTTCCAGAACCTAAGTAGAGGGTGAGGAAACAAGGCTCCTGGC-TTTTTTCCCTAATGCCTGCCATCTCTTTCAGA-TTTCTTATTTCTTTGCAAAGAAACTAAACAGGCTCGACTAAAAAAACTAAATGATTAAACCCTACACAGAGAATCTCCAAAGATTCACAAAATATCATTCAAGACTGTTAGAAAGACAGCCTTGAGGATAACTTGATGTACC-AGTGATCTACAATATTTGGGATCATTCCAAATTCCCGTCAAGGATCTGCCTATATCAACACAGGGACAAAGGACCAACCATTCAAATAGGCCCTGCTGCCAA------------------------AATGCCATCTCTTCATATTGTTCCATTTAACAAAACTGCAGCCTGTCATCTATCCTTAAGTCCCTTGGCCAATGGTACAGAGCCAGAGTATGCTACTCCCTAGCAGGAAATCAACAGAATGACCTACTAAACACCATTCAGAAGATGCTAAGGCCCATGAATTGCAACAGGAAAGAAAAGACAGATAATTAGTCAGACAGGTACATGCTGGGCCAAAAATGCACTACAATCCCCACCCAATTCTGCCTAATCCT--AGCTGGGCTGACACCAACCTGATGAGTCAGGCCTATAAGATCTCAAACTAAAACAGAAACTCCTGAACTGGGTTCTTGCAAACCCAGGAAGCAGCAGTAAACCATTAAAGAACAGATAAGGTCTGGAGGTGAGGGGGGAGTTTCAGATAAATGA i chlSab2.chr21 C 0 I 1517 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=2348460.000000 s hg38.chr17_GL383563v3_alt 33903 1366 + 375691 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCATGGGTTTGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGGGCAAGTTGGCAATCCAAGGTATAGCATGCATAGGGCTGGCAAAATTCAGGGTGACTGAAGCAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCTCAAACTGTGttctctactaaaaggaatcaaggttccctagagaaacggctgactccatgcatggtgcagtatattgatcctggaacatctgttttgccagaaagcaaggaagccatcaaagtccaacaggatcacgtcaaaaagacatgaaagtcaacttgaagagataattattaacctagatgagacaatgtaagcatccaaaacagtaaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataatggtattcagaaaaaaaaa---ctactggtcattagagggaaggttactaggtcactaacttactactctgaaaagtgacttaagatgagaggtagggtggagaattagctatttattcagtctttcctgtacaaacataaatttttagggAGATTGAAGCagatgaaacaaatct--ggaaaaatggaggtaactgcttaatctgcgggttgggtgcatggaggttcaacatatttcttttgtgtatatttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTAATGGGCTGAGCCAACTGGAGGTATATAGGGAAGTGCTAAATTGCAGAGGTATCATGTTGCCCAGCACTTGATCAAATCCTAGATCCTAGGTCTGCTTGGTAGCATGCTTCCTAGGTAGTGGATCTGAGGCTACCTATAGAACTTCCTTTGCAGTCATAGTTCGCTCAGAAACTACAAAAGTGCTTGCTCTTGAAAATGGA----gtctttgtccatttcatgcttctataaaagaataccacagactgcataatttataaaaaggaaaaaaggaaggaaagaa------------aaaaggaagggaggagggaaggagggaaaaagggaagg-agggaag-------gaaaggaaggaagggaaagaagga---------------------------------------- s panTro4.chr4 121855820 1366 + 193495092 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCATGGGTTGGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGGGCAAGTTGGCAATCCAAGGTATAGCATGCATAGGGCTGGCAAAATTCAGGGTGACTGAAGCAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAAAGATGAATCTTTGTAAGAGTGAAGCAGAACTACATAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCTCAAACTGTGttctctactaaaaggaatcaaggttccctagagaaatggctgactccatgtatggtgcagtatattgatcctggaacatcttttttgccagaaagcaaggaagccatcaaagtccaacaggatcacgtcaaaaagacatgaaagtcaacttgaagagataattattaacctagatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataatggtattcagaaaaaaaaa---ctactggtcattagagggaaggttactaggtcactaacttactactctgaaaagtgacttaagatgagaggtagggtggagaattacctatttattcagtctttcctgtacaaacataaatttttagggAGATTGAAGCagacggaacaaatct--ggaaaaatggaggtaactgcttaatctgcgggttgggtgcatggaggttcaacatatttcttttgtgtatatttgaaacccctac--aaaaaaagCACAAGACAGAATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTATATAGGGAGGTGCTAAATTGCAGAGGTATCATGTTGCCCAGTACTTGATCAAATCCTAGATCCTAGGTCTGCTTGGTAGCATGCTTCCTAGGTAGTGGATCTGAGGCTACCTATAGAACTTCCTTTGCAGTCATAATTCGCTCAGAAACTACAAAAGTGCTTGCTCTTGAAAACGGA----gtctttgtccatttcatgcttctataaaagaataacacagactgcataatttataaaaaggaaaaaaggaaggaaagaa------------aaaaggaaggaaggaggaaaggagggaaaaagggaagg-agggaag-------gaaaggaaggaaggaaaagaagga---------------------------------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8246358 1337 - 23176937 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCATGGGTTGGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGGGCAAGTTGGCAATCCAAGGTATAGCATGCATAGGGCTGGCAAAATTCAGGGTGACTGAAGCAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTTAGGAGACCTGCTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCTCAAACTGTGttctctactaaaaggaatcaaggttccctagagaaacggctgactccatgtatggtgcagtatattgatcctggaacatcttttttgccagaaagcaaggaagccatcaaagtccaacaggatcacatcaaaaagacatgaaagtcaacttgaagagataattattaacctagatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataatggtattcag-aaaaaaaa---ctactggtcattagagggaaggttactaggtcactaactcactactctgaaaagtgACTTAAGATGAGAGGTAGGGTGGAGAATTAGCCATTTATTCAGTTTTTCCTGTACAAACATAAATTTTTAGGGAGATTGAAGCAGATGAAACAAATCT--GGAAAAATGGAGGTAACTGCTTAATCTGCGGGTTGAGTGCATGGAGGTTCAACATATTTCTTTTGTGTGTATTTGAACCCCCTAC--AAAAAAAGCACATGATAGAATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTATATACGGAGGTGCTAAATTGCAGTGGTATCATGTTGCCCAGCACTTGATCAAATCCTAGATCCTAGGTCTCCTTGGTAGCATGCTTCCTAGGTAGTGGATCTGAGGCTATCTATAGAACTTCCTTTGCCGTCATAATTCGCTCAGAAACTGCAAAAGTGCTTGCTCTTGAAAATGGAGTCtgtctttgtccatttcatgcttctataaaagaataccacagactgcataatttataaaaaggaaaaaaggaaggaagg--------------------------------------------agggaagg-agggaag-------gaaaggaaggaagagaaagaagga---------------------------------------- i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46812705 1368 - 99891981 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCATGGGTTGGGGCAACTATTCTAACCAGAGAAACTGGCTTCAGTGAGAGCAAGTTGGCAATCCAAGGTATGGCATGCACAGGGCTGGTGAAATTCAGGGTGACTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTATACAGCAGTTTTAGGAGATCTGTTGGTGCCCAGCAAGAGCTCCAAACGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGGACAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaaaaggaatcaaggccccctagagaaatggctgactccatgtatgctgcagtacatagatcctggaacatcttttttgccagaaagcaaggaagacatcaaagtccaacaggatcacgccaaaaagacataagagtcaacttgaacagataattattaacctagatgagacaatgtaagcatccaaaacaaaaaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcataatggtattcagaaaaaaaaaaacctattggtcactagagtgaaggttaccaggtcacgaacttattaccctgaaaagtgacttaaaatgagaggtaaggtggagaattagctatttattcagtttttcctgtacaaacataaccttttagggAGATTGAAGCagatgaaacgaatct--ggaaaaatggaggtaactgcttaatctgcgggttgggtacatgaaggttcatcatatttcttttgtgtatatttgaaCCCCCTACAGAAAAAAAGCACAAGAC--AATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAAACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTATATAAGGAGGTGCTAAGTTGCAGAGGTATCATGTTGCCCAGCACTTGATCAAATCCTAGATCCTAGGTCTGCTTGGTAGCATACTTCCTAAGTGGTGGATCTGAGGCTACCTATAGAACTTCCTTTGCAGTCATAATTCGCTCAGAAATTACAGAAGTGCTTGCTCTTGAAAATGGA----gcctttgtccatttcatgctgctataaaagaatgccacagactgcataatttacaagaaggaaaaaaggaaggagggaa------------ggaggaaagggagggaaggaggaaagga--agggaaggaagggaag-------aaagggaaggaatggaaggaagca---------------------------------------- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127710306 1425 - 192294377 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAACCTTGTTTACTAGAGTATTAGGCACGGGGTGTGGCAACTATTCTAACCAAAGA----GGCTCCACTGGGTGTGGGTTAGCAATCCAAAGTATGGCATGTATAGGGCTGGTGGAATACAGGGTGACTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGACACAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGTGTGAGGCAGAACTATGTAACAGTATCAGGAGATCTGCTGGTGCCCAGCGAGAGTTCCAAATGGGCTATATGCAGGGATGCAGGCTGTAGTCTCAGAAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaacaggaattaaggccccctagagaaatggctgactccatgtatggtacagtatattgatcctggaacatcttttttgccagaaagcaaggaagtcatcaaagtccaacaggatcacatcaaaaagacaggagcgtcaacttgaagagataattattaacctcgatgagacaatgtaagcatccaaaacaataaagacaacaatggcctgaaatacatcaaatgcaaacaataatctatgagttcatgatgatattcagaaaaaaaaa---ctattggtcactagagggaaggttactaggtcactaacttactactctgaaaagtgacttaaaatgagaggtagggtggagaattagctatttattcagtttttcccttacaaacataaatttttagggagattaaaGCagatgaaacaaatct--ggaaaaatggaggtaactgcttaatcggagggttgggtacgtggaggttcatcctatttcttttgtgtatgtttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTAGGATTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTACATAGGGAGGTGCTAAATTGCAGAGGTATCATGCTGCCCAGCACTTGATCAAATCCTAGATACTAGGACTGCTTGGTAGCATGCTTCCTAGGTGGTGGATCTGAGGCTACCTACAGAACTTCCTTTGCAGTCGTAATTCGCTCAGAAACTACAAAAGGGCTTGCTCTTGAAAATGGAGTCGgtctttgtccatttcatgctgctataaaagaatgccacagactgcataatttacgagaaggaaaaaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg-aaggaaagggaagggaagggaaggaagggagggaaggagggaaaaagggaaggcaggaaggaggaaggggaggaaggc i macFas5.chr3 C 0 I 9 s papAnu2.JH684865 54407 1372 - 317753 AATGCTGGTAGAGCACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGAAACTTGTTTACTAGAGTATTAGGCATGGGTCGTGGCAACTATTCTAACCAGAGAAATTGGCTCCAGTGAGAGCGGGTTAGCAATCCAAAGTACGGCATGCATAAGGCTGGTGAAATTCAGGGTGATTGAAACAAAAGCTTCAGAACCAGAAAGACCACATCTGGGGGTAGAGCACAAAACTCTCAAGAGATGAATCTTTGTAAGAGTGAGGCAGAACTACATAGCAGTTTTAGAAGATCTGTTAGTGCTCAGCAAGAGCTCCAAACGGCCTATATGCAAAGATGCAGGCTGTAGTCTCAGGAGAGGAGGTTCAC--AAGTCATTCAGTCCAAGACCCCAAACTGTGTTCTCTACTAAAAGGAATCAAGTCCCCCTAGAGAAATGGCTGACTCCATGTACGGTACAGTATATTGATCC--AAACATCTTTTtggccagaaagcaaggaagccaTCAAAGTCTAACAGGATCATGTCAAAAAGACAGGAGAGTCAACTTGAAGAGATAATTACTAACCTCGATGAGACAATGTAAGCATCCAAAACAATAAAGACTGCAATGGCCTGAAATACATCAAATGCAAACAATAATCTATGAGTTCACAATGgtattcag--aaaaaaa---ctattgGTCACTAGAGGGAAGGTTATTAGGTTACTAACTTACTACTCTGAAAAGTGACTTAAAATGAGAGGTAGGGTGGAGAATTAGctatttattcagtttttcccttACAAACATACATTTTTAGGGGGATTGAAGAAGATGaaacaaatctaaaaaaaaatggaggtAACTGCTTAATCTGCGGGTTGGGTACATGGAGGTTCATCATATTTCTTTTGTGCATATTTAAACCCCCTCC--aaaaaaaGCACAAGACAGAATGTGAGCCAAGCAGCTTAGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTAGCCCTGATGGGCTGAGCCAACTGGAGGTACATAGCG-GGTACTAAATTGCAGAGGTATCATGTTGCCCAGCACTTGATCGAATCCTAGATGCTAGGACTGTTTGGCAGCATGCTTCCTAGGTAGTGGATCTAAGGCTACCTATAGAACTTCCTTTGCAGTCATAATTCGCTCAGAAACTACAAAAGGGCTTGCTCTTGAAAATGAAGTCTGTCTTTGTCtatttcatgctgctataaaagaatgccacagactgcataatttatacaaagaaaaaaaggaatgaaggaa--------------------------aaaaaaggaaggaaggagggaagg-agagaaa--------aagggaaggagggaaggaaaggaaggaa------------------tggaaggaaggaaagga i papAnu2.JH684865 C 0 I 9 s chlSab2.chr21 124171724 1370 - 127223203 AATGCTGGTAGAACACAGGGCCCAAAGGAGCAAAAGTTAACCTAAGCCCAGGTAGATCCTTGTTTACTAGAGTACTAGGCACGGGGTGTGGCAACTATTCTAACCAAAGA----GGCTCCACTGGGGGTGGGTTAGCAATCCAAGGTATGGTATGCATAGGGCTGGTGGAATTCAGGGGGACTGAAACAAAAGCTTCAGAACCAGAAAGACTATATCTGGGGACACAGCACAAAACTCTCAAGAGGTGAATCTTTGTAAGAGTGAGGCAGAACTATATAGCAGTTTCAGGAGATCTGCTGGTGCCCAGCGAGAGCTCCAAATGGGCTATATGCAGGGATGCAGGCTGTAGTCTCTGAAGAGGAGGTTCACAAAAGTCATTCAGTCCAAGACCCCAAACTGTGttctctactaaaaggaatcaaggccccctagagaaatggctgactccatgtatggtacagtatattgatcctggaacatcttttttgccagaaagcaaggaagtcatcaaagtccaacaggatcacatcaaaaagacaggagagtcaacttgaagagataattattaacctcgatgagacaatgtaagcatccaaaacaataaagactgcaatggcctgaaatacatcaaatgcaaacaataatctatgagttcatgatggtattcagaaaaaaaaa--tctattggtcactagagggaaggttactaggccactaacttactactctgaaaagtgacttaaaatgagaggtagggtggagaattagctatttattcagttttttccttacaaacataaatttttagggagattaaagtagatgaaacaaatct--ggaaaaatggaggtaactgcttaatcggagggttgggtacatggaggttcatcctatttcttttgtgtatgtttgaaCCCCCTAC--AAAAAAAGCACAAGACAGAATGTGAGCCAAGCAGCTTGGGGTTTAGGCAAGGCTTCTGCCTACAAGAGACACTAGGATATGAGGGGTAGTTTTGGCCCTGATGGGCTGAGCCAACTGGAGGTACATAGGGAGGTGCTAAATTGCAGAGGTATCATGTTGCCCAGCACTTGATCGAATCCTAGATACTAGGACTGCTTGGTAGCATGCTTCCTAGGTGGTGGATCTGAGGCTACCTACAGAACTTCCTTTGTAGTCATAATTCGCTCAGAAACTACAAAAGGGCTTGCTCTTGAAAATGGAGTCGgtctttgtccatttcatgctgctataaaagaatgccacagactgcataatttatgagaaggaaaaaAGAaaggaaggaa----------------ggaaggaaggaaggaaggaaggaaggaaggaagg-aaggaaggggaagggaagggaaggaagggagggaagga---------------------------------------- i chlSab2.chr21 I 1517 I 285 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=113168.000000 s hg38.chr17_GL383563v3_alt 35269 128 + 375691 aaggaaggaagggaaag----------agagaaagagggaaggaggaagggagggaaggagggagggaggga------gagaga--gagggagggaggggaagggaagaaaa----------------------------gggaagagaagggaaaggaggaaga--------------------aaaggaaag-------------------- s panTro4.chr4 121857186 136 + 193495092 aaggaaggaagggaaag----------agagaaagagggaaagaggaagggagggaaggagggagggagggagggagggagagaaggagggagggaggggaagggaagaaAA----------------------------TGGAGGAGAAGGGAAAGAAGGAAGA--------------------AAAGGAAAG-------------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8247695 129 - 23176937 aaggaaggaagggaaag----------agggaaagagggaaggaggaagtgagggaaggagggaggga----------gagaga--gagggagggaggggaagggaagaaaa----------------------------gggaggagaagggaaaggaggaagaaaAGG---------------AAAGGAAAG-------------------- i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46814073 141 - 99891981 aaggaaaggaagga-------------agggaaagagggaaggaggaagggagggaaggaggtaggga----------gaggga--gagggagggaggggaagggaacagaa----------------------------gggaggagcagggaaaggaggaagaaaaggaaaggaaaggaaagaaaaggaaag-------------------- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127711740 175 - 192294377 aaggaagggaagggaaggaagggaaagagggaaagagggaaggaggaagggagggaaggagggagggg----------gagaga--gaggaagggaggggaaaggaagagaa------------------cggaagaacagggaagggaagggaa--gcgaagggaacggaaaggaacggaacggaaaggaaaggaaaggaaAAG-------GT i macFas5.chr3 I 9 C 0 s papAnu2.JH684865 55788 202 - 317753 aaggaagggaagaaaggaagggaaggaagggaaagagggaaggaggcagggagagaaggaggcaggga----------gagaga--gagagtgggaggggaagggaagagaagggaggagaagggaagagaggaagaaaagggaggagaagggaaaggaggaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaag i papAnu2.JH684865 I 9 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e chlSab2.chr21 124173094 285 - 127223203 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=55561.000000 s hg38.chr17_GL383563v3_alt 35397 40 + 375691 gaaaggaataaat-tttatttcttaacagttctggatgtta s panTro4.chr4 121857322 40 + 193495092 GAaaggaataaat-tttatttcttaacagttctggatgtta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8247824 40 - 23176937 GAaaggaataaat-tttatttcttaacagttctggatgtta i ponAbe2.chr4_random C 0 C 0 s nomLeu3.chr17 46814214 38 - 99891981 gaaaggaaGAAAT-TTTATTCTT--ACAGTTCTGGATGTTA i nomLeu3.chr17 C 0 M 285 s macFas5.chr3 127711915 39 - 192294377 Gaaaggaagaaac-tttatttctt-gtagttctggatgcta i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 55990 40 - 317753 gaaaggaaagggcatttatttctt-acagttctggatgctA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124173379 39 - 127223203 Gaaaggaagaaac-tttatttctt-atagttctggatgcta i chlSab2.chr21 I 285 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=611708.000000 s hg38.chr17_GL383563v3_alt 35437 491 + 375691 ggaagtccaaggttgaggggcctgcatctggtaagggtcttcttgctgcatcatcccactacagaaggcagaaggaaaagagagtgcaagaaagcaagagggcaaaaggggctgaactctgttttataataagcccactctgtgattactaatctattaccacaataacaacattaactcattcatgaagcctattttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacatttaaaccacagcaGAGCACTTAGGTTAATTCAACTAAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAAGCTAGCAGAGAGAAATGCATAGGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTCCCCCAGCTCACCTCCATGCACATCTAAAGAGCCACACACAGCACCA s panTro4.chr4 121857362 487 + 193495092 ggaagtccaaggttgaggggcctgcatctgttaagggtcttcttgctgcatcatcccactacagaaggcagaaggaaaagagagtgcaagaaagcaagagggcaaaaggggctgaactctgtttt---ataagcccactctgtgattactaatctattaccacaataacaacattaactcattcatgaaggctattttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacatttaaaccacagcaGAGCACTTAGGTTAATTCAACTAAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAAGCTAGCAGAGAGAAATGCATAGGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCT-AAAAAGATCTCATTAACTCCCCCAGCTCACCTCCACTCACATCTAAAGAGCCACACACAGCACCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8247864 486 - 23176937 gaaagtccaaggttgaggggcctgcatctggtaagggtcttcttgctgcatcatcccactacagaaggcagaaggaaaagagagtgcaagaaagcaagagggtaaaaggggctgaattctgttttataatgtgcccactctgtgattcctaatctattaccacaataacaacattaactcattcataaaggctattttattaggccccacaccccaactgttgcattgaggattgagtttccagcacataaactttgggggacacatttaaaccatagcaGAGCAC-----TTAATTCAACCAAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAAGCTAGCAGACAGAAATGCACAGGTTAAGGGAAAAAGTCACAATGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTCCCCCAGCTCACCTCCAACCACATCTAAAGAGCCACACACAGCACCA i ponAbe2.chr4_random C 0 C 0 s macFas5.chr3 127711954 491 - 192294377 tgaaatccaaggttgaggggcctgcatctagtagggatcttcttgctgcatcatcccacgacagaaggcagaaggacaagagagtgcaagacagcaagagggcaaaaggggctgaactctcttttataataagaccactctgtgattacttatctattaccataataacaacattaactcattcgtgagggctctcttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacacttaaaccacagcaGAGCACTTATGTAAATTCAACCACGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAGGCTAGCAGAGAAATACGCGCAGGTTAAGGAAAAAAGTCAGAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACCTCCACCCACATCTAAAGGGCCACACACAGCACCA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 56030 490 - 317753 GAAATTCCAAGGTTGAGGGGACTGCATCTGGTAagggtcttcttgctgcatcatcccacgacaaaaggcagaaggaaaatagACTGCAAGAAAGCAAGACGGCAAAAGGGGCTAAACTCTCTTTTATAATAAACCCACTCTGTGATTACTTATCTATTACCACAATAACAACATTaactcattcatgagggctctctTATTAGGCCCCACATCCAAACTGTTGCATTGAGGACTGAGTTTCCAGCACATAAACTTTGGAGAATGTATTTAAACCACAGCAGAGCACTTACGTAAATTCAACCAAGTGGAGCTGGGAAAATCAAAGGCATGAGAAAGATAGCAAAGGCTAGCAGAGAAATATGCGCAGG-TAAGGAAAAAAGTCACAATGAATCCTGTAATGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACTTCCACCCACATCTAAAGGGCCACACACAGCGCCA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124173418 491 - 127223203 tgaaatccaaggttgaggggcctgcatctagtagggatcttcttgctgcatcatcccacgacagaaggcagaaggacaagagagtgcaagacagcaagagggcaaaaggggctgaactctcttttataataagaccactctgtgattacttatctattaccataataacaacattaactcattcatgagggctctcttattaggccccacatcccaactgttgcattgaggattgagtttccagcacataaactttgggggacacacttaaaccacagcaGAGCACTTACGTAAATTCAACCAAGAGGAGCTGGGAAAATCAAAGGCATGAGAAAGACAGCAAAGGCTAGCAGAGAAATACGCACAAGTTAAGGAAAAAAGTCACAGTGAATCCTGTAGTGCAGGCTACTTTATCAAAAGCACCTAAAAAAGATCTCATTAACTGCCCCAACTCACCTCCACCCACATCTAAAGGGCCACACACAGCGCCA i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I e nomLeu3.chr17 46814252 285 - 99891981 M a score=697895.000000 s hg38.chr17_GL383563v3_alt 35928 411 + 375691 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACAAGCTGGGAGTATCTAGACACCTGACCTCAATAGCTCCAGAACAGCCCTAAAACATTTCCTCCCTAACCACCACTCAAGTCACCAGCTTGGAAAGTATTAAGAAAACCCAAATCCTGACACACCACTATGAAACAACTTAAAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGTT-GGGAAAAAAAGGAACAATGAGTAGAGGAGAAACAGACCTCTCGGGGTCCACCAAGACCCAGTCTCTCAGCTTCAGCACTTTTAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACAAGGCATGTCGTCCTC-AAAGATAAATGAGCAGGCAAGCTGGCTAGAAAACCACTAAGGGTATT s panTro4.chr4 121857849 411 + 193495092 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACAAGCTGGGAGTATCTAGACACCTGACCTCAATAGCTCCAGAACAGCCCTAAAACAGTTCCTCCCTAACCACCACTCAAGTCACCAGCTTGGAAAGTATTAAGAAAACCCAAATCCTGACACACCACTAGGAAACAACTTAAAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGCT-GGGAAAAAAAGGAACAATAAGTAGAGGAGAAACAGACCTCTTGGGGTCCACCAAGACCCAGTCTCTCAGCTTCAGCACTTTCAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACAAGGCATGTCGTCCTCAAAAGATAAATGAGCAGGCAAGCTGGCTAGAAAACCACTAAGGGTA-T i panTro4.chr4 C 0 C 0 s ponAbe2.chr4_random 8248350 411 - 23176937 CCAAAGACAGCACAATGAGAACAGCATTCTCCTCAACAGACAAGCTGGGAGTATCTAGACACCTGACCTCTATAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTTGGAAAGTATTCAGAAAACCCAAATCCTGACACACCACTATGAAACAACTTAAAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGCT-GGGAAAAAAAGGAACAATAAGTAGAGGAGAAACAGACCTCTTGTGGTCCACCAAGACCCAGTCTCTCAGCTTCAGCACTTTCAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACAAGGCATGTCGTCCTC-AAAGATAAATGAGCAGGCAAGCTGGCTAGAAAACCACTAAGGGTATT i ponAbe2.chr4_random C 0 N 0 s nomLeu3.chr17 46814539 410 - 99891981 CCAAAGGCAGCACAATGAGAACAGCATTCTCGTTAATAGACGAGCTGTGGGTATCCAGACACGTGACCTCAACAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCATCACTCAAGTCACCAGCTGGGAAAATATTCAGAAAACCCAAATCTTGACACACCACTATGAAACAACTT-AAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGCT-GGGAAAAAAAGGAACAATGAGTAGAGGAAAAGCAGACCTCTTGGGGTCCACCAAGATCCAGTCTCTCAGCTTCAGCACTTTCAAATGCAGAATCCATACCCCTCTGGGGCCTGTGGAGCTCCACGAGGCAGGTTGTCCTC-AAAGATAAATGAGCAGCCAAGCTGGCCAGAAAACCACTAAGCGTATT i nomLeu3.chr17 M 285 C 0 s macFas5.chr3 127712445 401 - 192294377 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACGAGCTGTGAGTATCCATACACCTAA-CTCAATAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAAGTATTCAGAAAACCCAAATCCT-ACACACCACTACCAAACAAATT-AAACGGCAAAGAACAACCCATTTAAACAGCAATGCCAGTTGCTGGGGAGAAAAAGGAACAATGAGTAAAGGAAAAGCAGACCTCTTGGGGTCCACCAAGACCGAGTTTCTCAGCTTCAGCACTTTCAAATGTAGAAT-------CCTCTGGGGATTGTGGAGCTCCACGAGGCATGTTGTCCTC-AAAGATAAATAAGCAGGCAAGCTGGCTAGAAAATTGCTAAGGGTAT- i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 56520 408 - 317753 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACGAGCTGTGAGTATCCATACACCCGA-CTCAACAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAAGTATCCAGAAAACCCAAATCCTGACACACCACTACCAAACAACTT-AAACAGCAAAGAACAACCCATTTAAACAGCAATGCCAGCTGcc-aggaaaaaaaggaacaatgagTAGAGGAAAAGCAGACCTCTTGGGGTCTACCAAGATCCAGTCTCTCAGCTTCAGCACTTTCAAATGCAGAATTCATACACCTCTGGGGCCTGTGGAGCTCCACAAGGCATGTTGTCCTC-AAAGATAAACAAGCAGGCAAGCTGGCTAGAAAACCGCTAAGGGTAT- i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124173909 402 - 127223203 CCAAAGGCAGCACAATGAGAACAGCATTCTCCTCAACAGACGAGCTGTGAGTATCCATACACCTAA-CTCAACAGCTCCAGAACAGCCCTAAAACAGCTCCTCCCTAACCACCACTCAAGTCACCAGCTGGGAAAGTATTCAGAAAACCCAAATCCTGACACACCACTTCCAAAAAAATT-AAACGGCAAAGAACAACCCATTTAAACAGCAATGCCAGTTGCCAGGAAAAAAAAGGAACAATGAGTAGAGGAAAAGCAGACCTCTTGGGGTCCACCAAGACCAAGTTTCTCAGCTTCAGCACTTTCAAATGCAGAAT-------CCTCTGGGGCCTGTGGAGCTCCACGAGGCATGTTGTCCTC-AAAGATAAATAAGCAGGCAAGCTGGCTAGAAAATTGCTAAGGGTAT- i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=894112.000000 s hg38.chr17_GL383563v3_alt 36339 528 + 375691 TATTCTTTAAAGAATCTTTATAGGGTCAAAGAAGAATGGGTCCTAACTGGCTATGTGAACTCCCCACAGATTCTGAGGATGATGTCATTATCCCTTTCCAGATGTGTTTAACACTTTGCAGTCACTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGAACTGATTCCAGCTCACGCTGACCCCAGCTCCCTGGAT---GTTACCATTAGCCAAGACTGTCACCCATACTGTACCCTTTCAAAGAGTCCTAAAAACAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGACTGCCAAAGAAATGGGGAAAAAAGATTCAGAGAGTGAAAACAATTAATATACTAACAAGAGAGCAAAAAGCAAAGGGGGAGGAGAAACTAGGAAAATCATATATGGGCTCTCACCTATTTCCAAAGCTGGGCTAATGTCCTTCTGCTTGTGTCTGAATAAGGCACCAATTTTAAGCTGCTAATG-AAAAA--AAAAGAAAAAG----AGAAAGAAGCAGGCCCAggctgggcgcagt-----g s panTro4.chr4 121858260 523 + 193495092 TATTCTTTAAAGAATCTTTATAGGGTCAAAGAGGAATGGGTCTTAACTGGCTATGTGAACTCCCCACAGATTCTGAGGATGATGTCAGTAGCCCTTTCCAGATGTGTTTAACACTTTGCAGTCACTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGAGCTGATTCCAGCTCACGCTGACCCCAGCTCCCTGGAT---GTTACCATTAGCCAAGACTGTCACCCATACTGTACCCTTTCAAGGAGTCCTAAAAACAGCTCTTCACCTACTCTTC-----CAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTCAGAGAGTGAAAACAATTAATATACTAACAAGAGAGCAAAAAGCAAAGGGGGAGGAGAAACTAGGAAAATCATAGATGGGCTCACACCTATTTCCAAAGCTGGGCTAATGTCCTTTTGCTTGTGTCTGAATAAGGCACCAATTTTAAGCTGCTAATG-AAAAA--AAAAGAAAAAG----AGAAAGAAGCAGGGCCAggctgggcgcagt-----g i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27568437 525 + 35968885 TATTCTTTAAAGAATCTTTGTAGGGTCAAAGAGGAATGGGTCTTAACTGGCTATGTGAACTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTTAACACTTTGCAGTCACTTGTATTCCTGACACTGAGTGCCAGTGCTTTGCTAATTTGGACTGATTCCAGCTCACGCTGACCCCAGCTCCCTGGAT---GTTACCATTAGCCAAGACTGTCACCCATACTGTACCCTTTCAAAGAGTCCTAAAAATAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTCAGAGAGTGAAAAC----AACATACTAACAAGAGAGCAAAAAGCAAAGGGGGAGGAGAAACTAGGAAAATCATATATGGGCTCACACCTATTTCCAAGGCTGGGCTAATGTCCTTTTGCTCGTGTCTGAATAAGGCACCAATTTTAAGCTGCTAATGAAAAAA--AAAAGAAAAAG----AGAAAGAAGCAGGCCCAggcccggcgcggt-----g i ponAbe2.chr1_random N 0 C 0 s nomLeu3.chr17 46814949 528 - 99891981 -ATTTTTTAAAGAATCTTTATAGGGTCAAAGAGGAATGGGTCTT-ATAGGCGATGTCTATTCCCCACAGATTCTGAGGATGATATCAGTATCCCTTTCCAGATGTGTTTAACACTTTGTGGTCGCTTGTATTCCTGCCACTGAGTGCCAGTGCTTTGCTAATTTGAACTGATTCCAACTCACGCTGACCCTGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATACTGTACCCTTTTAAAGAGTCCTAAAAACAACTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGAGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAGAAAGCGAAGCGGGAGGAGAAACTAGGAAAATCATATGTGGGCTCACACCTATTTCCAAAGCTGGACTAACATCCTTTTGCTTGTGTCTGAATAAGGCATCAATTTTAAGCTGCTAACG--AAAA--AAAAGAAAAAG----AGACAGAAGCAGGCCTAggccgggcgcggt-----g i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127712846 540 - 192294377 TATTCTTCAAAGAATCTTTATAGGGTCAAACAGGAATGTGTCTT-ACGGGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTGAATAATTTGCGGTCACTTGTATTCCTGCCACTGAGTACCATAGTTTTGCTAATTTGAACTGATTCCAGCTCACACTGACCCCGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATATTGTACCCTTTCAAAGAGTCCTAAAAAGAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAAAAAGCGAAGGGGAAGGAGAAACTAGGAAAATCATACATGGGCTCACACCTATTTCCAAAGCTGGGCTAATATTCTTTTGCTTGTGTCTGAGTAAGTCACCAATTTTAACCTGCTAATG--AaaaagaaaagaaaaagagaatgaaagaaGCAGGCCCAGGACGGGCACGGTGATAGG i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 56928 524 - 317753 TATTCTTTAAAGAACCTTTATAGGGTCAAAGAGGAATGGGTCTT-ACAAGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTTAACACTTTGCGGTCACTTGTATTCCTGCCATTGAGTGCCAGTGCTTTGCTAATTTGCACTGATGCTAGCTCACGCTGACCCTGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATACTGTACCCTTTCAAAGAGTCCTAAAAACAGCTCTTCACCTACTCTTCCAAGACGAGTaaaaatgtctgccaaagaaatgaggaaaaaagattcagagagaaaaaacaattaacatactaacaagagagcaaaaaGCGAAGGGGGAGGAGAAACTAGGAAAATCATATATGGGCTCACACCTATATCCAAAGC-GGGCTAATATTCTTTTGCTTATGTCTGAATAAGGCACCAATTTTAAGCTgctaatg--aaaa--aaaagaaaaag--------agaagcaggcccaggccaggcacggt-----g i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124174311 531 - 127223203 TATTCTTCAAAGAATCTTTATAGGGTCAAACAGGAATGTGTCTT-ACGGGCTATGTGTATTCCCCACAGATTCTGAGGATGATGTCAGTATCCCTTTCCAGATGTGTTGAACAATTTGCGGTCACTTGTATTCCTGCCACTGAGTACCAGTGCTTTGCTAATTTGAACAGATTCCAGCTCACACTGACCCCGGCTCCCTGGATCTGGTTACCATTAGCCAAGACTGTCATCCATATTGTACCCTTTCAAAGAGTCCTAAAAAGAGCTCTTCACCTACTCTTCCAAGACAAGTAAAAATGTCTGCCAAAGAAATGGGGAAAAAAGATTGAGAGAGAGAAAACAATTAACATACTAACAAGAGAGCAAAAAGCGAAGGGGAAGGAGAAACTAGGAAAATCATACATGGGCTCACACCTATTTCCAAAGCTGGGCTAATATTCTTTTGCTTGTGTCTGAGTAAGTCACCAATTTTAACCTGCTAATG--AAAA--AAAAAAAAGAG--AATGAAAGAAGCAGGCCCAGGCCGGGCACGGT-----G i chlSab2.chr21 C 0 I 15 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=5959.000000 s hg38.chr17_GL383563v3_alt 36867 9 + 375691 gctcatgc-c s panTro4.chr4 121858783 9 + 193495092 gctcatgc-c i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27568962 9 + 35968885 gctcatgc-c i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46815477 9 - 99891981 gctcatgc-c i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127713386 10 - 192294377 ATTAAAGTGc i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 57452 9 - 317753 gctcacgt-c i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e chlSab2.chr21 124174842 15 - 127223203 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=862310.000000 s hg38.chr17_GL383563v3_alt 36876 578 + 375691 tgtaatcccagcactttgggaggccgaggcgggtggatcacccaaggtcaggagttctagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagccaggcatggtggcgcatgcctgtaaatccagctactaaggaggctgaggcaggagaattgcttgaacctggaaggcagagaatgtggtgacctgagatcacgtcattgccctcaagccACGGCAATGAGAACAAAATTCAGTA-----aaaacaaaacaaaa-------caaaacaaaacCACCATAAAATAACTCAGACTTAATTAAATACAACCCTAGTGGTGAATGACT-----------------AAAGATGGATTACTCATAACAGAGA-TAACAGTCCAATAAGAATCCAGGAATCTTACCTTTTAATAACAAAA-AAATCCTTTCCTTCTAAAGTAACATCCTCTCAAGGCCAGGAATTCCATTAGTAGAAAGCCTTCCTAAAAAACAAAATTCCTggccaggcatgggttcacgtctgtaatctcagcattctgggaggccgaggcgggaagatcacttgatatcaggagtcgaggcgggaagat s panTro4.chr4 121858792 583 + 193495092 tgtaatcccagcactttgggaggccgaggcgggtggatcacccaaggtcaggagttctagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagccaggcatggtggcgcatgcctgtaaatccagctactccggaggctgaggcaggagaattgcttgaacctggaaggcagagaatgtggtgacctgagatcacgccattgccctcaagccacggcaatgagaacaaaattcggtaaaaacaaaacaaaacaaaa-------caaaacaaaacCACCATAAAATAACTCAGACTTAATTAAATACAACCCTAGTGGTGAATGACT-----------------AAAGATGGATTGCTCATAACAGAGA-CAGCAGTCCAATAAGAATCCAGGAATCTTACCTTTTAATAACAAAA-AAATCCTTTCCTTCGAAAGTAACATCCTCTCAAGGCCAGGAATTCCATTAGTAGAAAGCCTTCCTAAAAAACAAAATTCCCggccaggcataggttcacgtctgtaatctcagcactctgggaggccgaggcgggaagatcacttgatgtcaggagtcgaggcgggaagat i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27568971 544 + 35968885 tgtaatcccagcactttgggaggccgaggcgggtggatcacccaaggtcagg-gttctagaccagcctggtcaacatggtgaaacaccatctctactaaaaatacaaaaaattagccaggcatggtggcacatgcctgtaaatccagctacttaggaggctgaggcaggagaattgcttgaacccggaaggcagagaatgtggtgacctgagatcacgccattgccctcaagccagggcaatgagaacaaaattcggta---------------aaaa-------cacaacaaaaCCACCATAAAATAACTCAGACTTAATTAAATACAACCCTAGTGGTGAATGACT-----------------AAAGATGGATTACTCATAACAGAGA-TAACAGTCCAATAAGAATCCAAGAATCTTACCTTTTAATAACAAAA-AAATCCTTTCCTTCGAAAGTAATATCCTCTCAAGGCCAGGAATTCCATTAGTAGAAAGTCTTCCGAAAAAACAAAATTCCTggccaggcataggttcacgtctgtaatctcagcactctgggaggccaaggcgggaagatcacttgat----------------------- i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46815486 567 - 99891981 tgtaatcctagcactttgggaggccaacacgggtggatcacccaaggtcaggagttcgagaccagcctggtcaacatggtgaaacatcatctctactaaaaatacaaaaaattagctgggcatggtggtgcctgcctgtaaacccagcttctcgggaggctga-gcaggaaaatagcttgaacccagaaggcagagaatgtgatgacctgagatcacaccattgccctcaagccagggcaatgacagcaaaattcggtc--------tcaa---aaaa-------aaaaaaaaaaaaaacataaaataaCTCAGATTTCATTAAATACAACCCTAGTGGCGAATGACTATTGGTCAACAATAAAAAAAGATGGATTACTCAGAACAGAGATTAAGAGTCCAATAAGAATCCAAGAATCTTACCTTTAAATAACAAAATAAATCCTTTCCTTGGAAAGTAATATCCTCTGAAGGCCAGGAATTCCATTAGTAGACAACCTTCTTAAAAAAAAAAATTCCTggccaggcatgggttcatgcttgtaatcccagcactttgggaggctgaggcaggaggatcacctgag----------------------- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127713396 554 - 192294377 tgtaatcctagcactttgggaggccgaggcgggtggatcaccccaggtcaggagttcgagaccagcctggtcaacctggtgaaacaccatctctactaaaaacacaaaaaattagctgggcatggtggcgcatgcctgtaaacccagctactcgggaggccga-gcaggagaacagcttgaac-------gtagagaatgtgatgacctgagatcacatcattgccctcaagccagggcaatgagagcaaaactcggtc--------tcaaaagaaaa-------------aaaaaaGCCATAAAATAACTCAGATTTCATTAAATACAACCCTAGTGGTGAATGACTACTGGTCAACAATAAA-AAAGATGGATTACTCAGAACAGAGATTAAGAGTCCAGTAAGAATCCAGGAATCTTACCCTTAAATAATGAAGGAAATTCTTTCCTTGGAAAGTAATATCCTCTC-AGGCCAGGAACTCCATTAGTAGACAGCCTTTTTAAAAAA-AACATTTCTggccgggcatgggttcacgcctctaatcccagcactttggagggctgaggcaggaagatcacctgag----------------------- i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 57461 574 - 317753 tgtaatcccagcactttgggagaccaaggcaggtggatcacccaaggtcaggagttcgagaccatcctggtcaacctggtgaaacaccatctctactaaaaatacaaaaaattagccaggcatggtggcacatgcctgtaaacccagctactcaggaggctgaggcaggagaattgcttgaacctggaaggcagagaatgTGGTGACCTGAGATCATACCATCACCCTTAAGCcagggcaatgagagcaaaattcagtc--------ttaaaaacaaaacaaaacaaaaccaaaaaaaacataaaataactcaGACTTAATTAAATATAACCCTAGTGGT--ATGACTATTggtcaacaataaa-aaagatggaTTACTCAGAACAGAGA-TAAGAGTCCTGTAAGAATCCAAGAATCTTACCTTCTATTAATGAAAGAAATCCTTTCCTTTAAAAGTAATATCCTCTCAAGGCTAGGAATTCCACTAGTAGACAGccttcttaaaaaacaaaattcctggctgggcatgggttcacgcctgtaatcccagcactttaggtggctgaggcgggaagatcacctgag----------------------- i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124174857 561 - 127223203 tgtaatcctagcacttagggaggccgaggcaggtggatcaccccaggtcaggagttcgagaccagcctggtcaacctggtgaaacaccatctctactaaaaatacaaaaaattagctgggcatggtggcgcatgcctgtaaacccagctactcgggaggccaa-gcaggagaacagcttgaacccagaaggcagagaatgtgatgacctgagatcacaccattgccctcaagccagggcaatgagagcaaaactcggtc--------tcaaaagaaaa-------------aaaaaaGCCATAAAATAACTCAGATTTCATTAAATACAACCCTAGTGGTGAATGACTACTGGTCAACAATAAA-AAAGATGGATTACTCAGAACAGAGATTAAGAGTCCAGTAAGAATCCAGGAATCTTACCCTTAAATAATGAAAGAAATCCTTTCCTTGGAAAGTAATATCCTCTC-AGGCCAGGAACTTCATTAGTAGACAGCCTTCTTAAAAAA-AACATTTCTggtcgggcatgggttcacgcctctaatcccagcactttgggaggctgaggcaggaagatcacctgag----------------------- i chlSab2.chr21 I 15 C 0 e calJac3.chr2 1447413 14456 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=839468.000000 s hg38.chr17_GL383563v3_alt 37454 426 + 375691 cacttgacgtca--ggagttcgagactggcccggccaacatggtgaaaccgcatctccactaaaaatacaaaaattagcctggtgtggtggtgggcacctgtaatcccagtgacttgggaggct-a-------aggcaggagaatttcttgaacccaggaggcagaggttgcagtgaccagcaaggttgcgccattgcaccccagcctgggcgataagagtgaaaactccatctc------aaaaaaaaaaaaaaaaaaaaaaTTCCTTTGGGAAGGCCTTCTACATAAAAATCTTCAACATGAGACTGGAAAAAAGGGTATGGGATCATCACCGGACCTTTGGCTTTTACAGCTCGAGCTATAAGAACAAAAAGAAAAAGGGATATCATTTAAACACGGTATGTAGAAAAGAATAATTATTGAATCTGTACTGGTC-TTTAA s panTro4.chr4 121859375 423 + 193495092 cacttgacgtca--ggagttcgagactggcccagccaacatggtgaaaccccatctccactaaaaatacaaaaattagcctggtgtggtggtgggcacctgtaatcccagcgacttgggaggct-a-------aggcaggagaatttcttgaacccaggaggcagaggttgcagtgaccagcaaggttgcgccattgcaccccagcctgggcgataagagtgaaaactctatctc----------aaaaaaaaaaaaaaaaaaTTCCTTTGGGAAGGCCTTCTACATAAAAATCTTCAACATGAGACTGGAAAAAACGGTATGGGATCATCACTGGACCTTTGGCTTTTACAGCTCGAGCTATAAGAACAAAAAGAAAAAGGGATATCATTTAAACACAGTATGTAGAAAAGAATAATTATTGAATCTGTACTGGTCTTTTAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27569515 431 + 35968885 --------gtca--ggagttcgagactggcctggccaacatggtgaaaccccatctccactaaaaatacaaaaattagcctggtgtggtggtgggcacctgtaatcccagcgacttgggaggct-aaggcaggaggcaggagaatttcttgaacccaggaggcagaggttgcagtgaccagcaaggttgcgccattgcaccctagcctgggcgataagagtgaaaactccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaTTCCTTTGGGAAGGCCTTCTACATAAAAATCTTCAACATGAGACTGGAAAAAAGGGTATGGGATCATCACCGGACCTTTGGCTTTTACAGCTCGAGCTGTAAGAACAAAAAGAAAAAGGGATATCATTTAAACACAGTATGTAGAAAAGAATAATTATTGAATCTATACTGGTC-TTTAA i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46816053 414 - 99891981 --------gtca--ggagttcgagactggcctggccaacatggtgaaaccccatctccactaaaaatacaaaaattagcctgacgtggtggtgggcacctataatcccagcgacccaggagggt-a-------aggcaggagaatcacttgaacccaggaggcagaggttgcagtgagc--caaggtcgtgccattgcactccagcctgggtgacaagagtgaaaactctgtctc--------aaaaaaaaaaaaaaaaaaaaTTCCTTTGGGAAGGCCTTCTACATAAAAATCTTCAACATGAGACTGGAAAAAAGGGTATGGGACCATCCTTGGACCTTTGGCTTTTACAGCTGGAGCTACAAGAACAAAAAGAAAAAGGGATATCATTTAACCACAATATATAGAAAAGAATAATTATTGAATCTGTATTGGTC-TTTAA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127713950 405 - 192294377 --------gtca--ggagttcaagaccggcctggccaacatggcgaaaccccatctccactaaaaatacaaaaattagcctggcatggtgctgggcacctgtaatcccagcaactcgggaggctaa-------aggcagaagaatcgcttgaacccaggaggcagaggttgcagtgagc--caaggtcgcgccattgcactccagcctgggtgacaagagtgaaaa--ctgtctc--------aaaaaaaaaaaa--------TTCCTTTGGGAAGAACTTCTACATAAAAATCTCCAACATGAGATTGGAAAAAACGGTATGGGATCATCCCCGGACCTTTGGCTTTTACAGTTGGAGCTATAAGAACAAAAAGAAAAAAGGATGTCATTTAAACACAATATGTAGAAAAGCATAATTATTGAATCTGTATTGGTC-TTTAA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 58035 413 - 317753 --------gtca--ggagttcaagaccagcctggccaacatggtgaaaccccatctccactaaaaatacaaaaagtagcctggagtggtggtgggcacctgtaattccagcaagttgggaggct-a-------aggcaggagaatcgcttgaacccaggaggcaaaggttgcagtgagc--caaggttgcaccattgcaccccagcctgggtgacaagagtgaaac-tccatctc--------aaaaaaaaaaaaaaaaaaatttcctttgggAAGGCCTTCTACATAAAAATCTTCAACATGAGAATGGAAAAAAGGGTATGGGATCATCACTGGACCTTTGGCTTTTACAGCTCGAACtataaggacaaaaagaaaaagggatatCATTTAAACACAATatatagaaaagaataattaCTGAATCTGTATTGGtc-tttaa i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124175418 407 - 127223203 --------gtca--ggagttcaagaccggcctggccaacatggcgaaaccccatctccactaaaaatacaaaaattagcctggcgtggtgctgggcacctgtaatcccagcaactcgggaggct-a-------aggcagaagaatcacttgaacccaggaggcagaggttgcagtgagc--caaggtcacgccattgcactccagcctgggcgacaagagtgaaaactctgtctg--------aaaaaaaaaaaaa-------TTCCTTTGGGAAGAACTTCTACATAAAAATCTCCAACATGAGACTGGAAAAAACGGTATGGGATCATCCCCGGACCTTTGGCTTTTACAGTTGGAGCTATAAGAACAAAAAGAAAAAAGGATGTCATTTAAACACAATATGTAGAAAAGCACAATTATTGAATCTGTATTGGTC-TTTAA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1461869 385 + 204313951 CACTTAATATCACCTAagttgaagaccagcctggccaacacggaaaaatcccatctctactaataatatgaaaattaccctggcatggtggcaggcaactgt-----------------------g-------aggcaggagaactgcttgaagccaggag---------acagtgagc--cagaatcacaccattccactctaacctgggcaacaagaatgaaaactccatctc--------aagaaaaagaaaacaaa---TTCCTTTGGGAAGTCCTTCTACATTCACATCT-CAACATGAGACTGGACAAAAGGGTATGGGATCATCACCAGACCTTTGGCTTTTACAGCTTGACCTATAAGGAC-AAAAGAAAAAGGGATACCATTTAAACACAATTTGTAGGTAAGGATAAT---TGAATCTGTATTGCTC-TTTAA i calJac3.chr2 I 14456 I 1436 e rheMac3.chr3 59790376 47450 + 198365852 I a score=348211.000000 s hg38.chr17_GL383563v3_alt 37880 202 + 375691 CTTTTACACTTTGATCTTTAATTCTGTTATTGTGATTGAGTCCAAAGAAAAACAGTATGAGTAAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTACCGAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtga--cacacccataatccca---------------------------------------agcactttgggaggctgaggcgggtgaatctcctgaagtca s panTro4.chr4 121859798 201 + 193495092 CTTTTACACTTTGATCTTTAATTCTGTTATTGTGATTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTACCAAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtga--cacacccataatccc----------------------------------------agcacttcgggaggctgaggcgggtgaatctcctgaagtca i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27569946 203 + 35968885 CTTTTACACTTTGTTCTTTAATTCTGTTATTGTGATTGAGTCCAAAGAAAAATAGTAGGAGTAAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTACCAAATTCTGTAGTGAAATATCCCATTAAATccaagtgcagtgactcacacccataatccc----------------------------------------agcactttgggaggctgaggcgggtgaatctcctgaagtca i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46816467 241 - 99891981 CTTTTACACTTTGATCTTTAAT--TGTTATTGTAACTGAGTCCAAAGAAAAATGGTATGCGTGAAATAAAAAGAACACCAAAAATGCTAATATTCTGTTTATCAAAGTCTGTAGTGAAATATCCCATTAAATccaagtgcagtgactcacacccataatcccagcactttgggatgctgaggcaggtgaatctcctaatcccagcactttgggatgctgaggcaggtgaatctcctgaggtca i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127714355 203 - 192294377 CTTTTATACTTTGATCTTTAATTCTGTTCTTGTTACTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCATAAATGCTAATATTCTGTTTATCAAAGTCTGCAGTGAAATATCCCATTAAATccaagtgcagtgactcacacccataatccc----------------------------------------agaactttgggaggctgaggcgggtgaatctcctgaggtca i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 58448 203 - 317753 cttttacattttgatCTTTAATTCTGTTATTGTAATTGAGTCCAAAGAAAAATAGTATgagtaaaacaaaaagaacaccaAAAATGCTAATATTCTGTTTATCAAAGTCTGTAGTGAAATATCTCATTAAAtccaagtgcagtgactcacacccataatccc----------------------------------------agcactttgggaggctgaggcgggtgaatctcctgaggtca i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124175825 203 - 127223203 CTTTTATACTTTGATCTTTAATTCTGTTCTTGTTACTGAGTCCAAAGAAAAATAGTATGAGTAAAATAAAAAGAACACCATAAATGCTAATATTCTGTTTATCAAAGTCTGCAGTGAAATATCCCATTAAATccaagtgcagagactcacacccataatccc----------------------------------------agaactttgggaggctaaggcgggtgaatctcctgaagtca i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e rheMac3.chr3 59790376 47450 + 198365852 I a score=2139161.000000 s hg38.chr17_GL383563v3_alt 38082 1036 + 375691 ggagttcaaggccagcctggccaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcagaggcctgtaatcccagctacttaggaggctgaggcagg--------------------------------gagaattgcttgaacccaggaggt-gagcttgccatgagct--gagatcatacc---------actgcactccagcgtgggtgacagaacaaaacttcaacctccaaaaaaaa---------------aaaaaaaaa--------aaCAGCTAGC---------AGGTGACATTTGCTATAGGGAGTAGGGAGACTAGGGATATGATCTTGCTGCAATCTTTCCATTTTAGTAAATCTAAACAAGTGTGAATCCATTCTGTTTCGTCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTATATTTCTAGTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCATGGTTCCATACTCTAAAAGAAAA---CTTATGTCCTGCATATCATGGACATTTGATGAATGCTTATTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATGCCAGATGAATCTTGCATCTCAAAAGTAGAACAAATATTGTTCTTTCAGTTTTGTCTACCCATAAATGCAATATTTAC------------------TAATAAAAAGAAAATG-AGTTTATTGTTCTAGAGAGTATGAGAATTTTGACAACATGAATTCTCCTGTCCTAGGACATAATTAATACTTAGAGGCATACTATTTCATGTGGAAGCTACCATT-----AAATCAATGTTAAGTGTTA----ATTACCTCACATAATCTTCTAATCTGACTT--GACTGAAGACGTACCTGACAAAGTTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATGTCTGAAAGGTGAGAATAAATACTTAATATTCATTAGGCAATATTCAGCAAAGTAATATCCACTAGTACATATTTAATATTTCATCATGAACTGCGGGTGTGAAGAGAAAAGACAggctgggcacagtggc---tcacacctgtaatcccagcagtttgggaggccgaggca s panTro4.chr4 121859999 1017 + 193495092 ggagttcaaggccagcctggccaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcaaaggcctgtaatcccagctacttaggaggctgaggcagg--------------------------------gagaattgcttgaacccaggaggt-gagcttgccatgaggt--gagatcatacc---------actgcattccagcgtgggtgacagaacaaaacttcaacctcc-------------------------aaaaaaa--------aaCAGCTAGC---------AGGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAATCCTTCCATTTTAGTAAATCTAAAC-AGTGTGAATCCATTCTGTTTCGTCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTATATTTCTAGTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCATGGTTCCATACTCTAAAAGAAAA---CTTATGTCCTGCATATCATGGACATTTGATGAATGCTTATTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATGCCAGATGAATCTTGCATCTCAAAAGTAGAACAAATATTGTTCTTTCAGTTTTGTCTACCCATAAATGCAATATTTAC------------------TAATAAAAAGAAAATGAAGTTTATTGTTCTAGAGAGTATGAGAATTTTGACAACATGAATTCTCCTGTCCTAGGACATAATTAATACTTAGAGGCATACTATTTCATGTGGAAGCTACCATT-----AAATCAATGTTAAGTGTTA----ATTACCTCACATAATCTTCTAATCTGACTTAAGACTGAAGAGGTACCTCACAAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTAAATTCGTAAGTTCATGTCTGAAAGGTGAG----AATACTTAACATTCACTAGGCAATATTCAGCAAAGTAATATCCACTAGTACATATTTAATATTTCATCATGAACTGCGAGTGTGAAGAGAAAAGACAggctgggcacagtggc---tcacacctgtaatcccagcagtttgggaggccgaggca i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27570149 1047 + 35968885 ggagttcgaggccagcctggccaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcagaggcctgtaatcccagctacttaggaggccgaggcagg--------------------------------gagaactgcttgaacccaggaggt-gagcttgccacgagctgagagatcatacc---------actgcactccagcgtgggcgacagaacaaaacttcaacttacaaaaaaaaaaaaaaaaaaacaccaaaaaaaaa--------aaCAGCTAGC---------AGGTGACATTTGCTA-------CGGGGAGCCTAGGGATATGATCTTGCTGCAATCCTTCCATTTTAGTAAATCTAAAC-AGTGTGAATCCATTCTGTTTCGTTCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTATATTTCTATTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATGATATGCATGGTTCCATACTCTAAAAGAAAA---CTTATGCCCTGCATATCATGGATATTTGATGAATGCTTATTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATGCCAGATGAATCTTGCAACTCAAAAGTAGAACAAATATTGTTCTTTCAGTTTTGTCTACCCATAAATGCAATATTTAC------------------TAATAAAAAGAAAATG-AGTTTATTGTTCTAGAGAGTATGAGAATTCTGACAACATGAATTCTCCTGTCCTAGGACATAATTAATACTTAGAGGCATACTATTTCATGTGGAAGCTACCATT-----AAATCAATGTTAAGTGTTA----ATTACTTCACATAATCTTCTAATCTGACTTACGAGTGAAGACGTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATGTCTGAAAGGTGAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACTAGTACATATTTAATATTTCATCATGAACTGTGAGTGTGAAGAGAAAAGACAggctgggcacagtggc---tcacacctgtaatcccagcagtttgggaggccgaggca i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46816708 1025 - 99891981 ggagttcgaggccagcctggtcaacatggt----------------------------------------gtgatggcaggggcctataatcccagctacttaggaggctgaagcagggagaattgcttgaacccaggaggtgagcttgcgagaattgcttgaacccaggaggt-gagcttgccatgagct--gagatcacacc---------aatgcactccagcgtgggcgacagaacaaaactccatcttaccaa--------------------aaaaaaaag--------aaCAGCTAGC---------AGGTGACATTTGCTA-------TGGGGAGACCAGGGATATGATCTTGTGACAATCCTTCCATTTTAGTAAATCTAAAC-AGTGTGATTCCATTCTGTTTCATCCCCACTCCACTCCAGAGCCAAAA----CAAGAAAATCAATTATGTTTCTGTTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGACAATATGCATGGCTCCATACTCTAAAAGAAAACTTCTTATGTCCTGTGTACCATGGACATTTGATGAATGCTTGTTCAGCTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCAGATAAATCTTGTATCTCAAAAGTAGGACAAATATTGTTCTTTCAGTTTTGTCTACCCA-AAATGCAATATTTACATGTATTT-ATAATGGGTTAATAAAAAGAAAATG-AGTTTATTGTTCTAGAGAGTATGAGAATT-TGAAAACATGAATTCTCCTGTCGTGGCACATAATTAATAATTAGAGGCAT-----------TGGAAGCTACCATTAAAAGAAATCAATGTTAAGCATTA----ATTACTTCACATAATCTTCTAACCTGACTTAAGACCGAAGACCTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGCTGAATTCATAAGTTCATGTCTAAAAGGTGAG----AATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACTAGTACATATTTAGCATTTCATCACCAAGGGTGGGTGTGAAAAGAAAAGACAgactgggcacggtggc---tcacgcctgtaattccagcactttgagaggccaaggca i nomLeu3.chr17 C 0 I 3560 s rheMac3.chr3 59837826 1055 + 198365852 ggagttcgagaccagcctggccaacatggtgacaccgcagctctaatacaaatataaaaattaggcgggtgtgatggcaggtgcctgtaatcccagctacttgggagcctgaggcagg--------------------------------aagaattgcttgaacctgggaggtggagggtgcaatgagtt--gagatcacacc---------actgcactccagcgtgggtgacagagcaaaactccatctcaaaaaaaaa----------------aaaaaaaaaaaaaaaagaaCAGCTAGC---------AGGTGCCATTTGGTA-------TGGGGAGACTATGCATATAATCTTGCAGCAATCCTTCCATTTTAGTAAATCTAAAC-AGTGTGATTCCATTCTGTTTTGTCCCCACTCTACTCCAGAGCCAAAACAAGTAAGAAAATCAGTTATATTTCTGTTTCTTTCAAAACACATCTAAC----------AATTAAGAGACGATATGCATGGCTCCATATTCTAAAAGGAAACCTCTTATATCCTGGGTATCATGGACATTTGATGAATGTTTGCTCAGTTGTTTGGTGCAAGCTTCAATAATAACCTGTTCAATGCATTATGCCAGATAAATCTTGCATCTCAAAAGTAGGAAAAATATTGTTCTTTTAGTTCTGTCTACCCATAAATGCAACATTTACATGTATTT-ATAATGGGTTAATAAAAATAAAGTG-AATTTACTGTTCTAGAGAGTATTAGAATTTTGACAACATGAATTCTCCTGTCCTGGCATGTAATTAAAAGTTAGAGGAATATTATTTCATGTGGAAGATACCATTAAAAAAAATCAATGTTAAGCATTAAATAATTATTTTACATAATCTTCTAATCTGACTTAAGACTGAAGACCTACCTCCTGAAGCTGGTTTATCAAGTTGTAAATCTTCATGTGTCGAACTCACAAGTTCATGTCTGCAAGGTGAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCATTAGTACATATTTAACATTTAATCACCAAGGGTGGCTTTGGAAAGAAAAGACAggctgggcacagtggc---tcacacctgtaatcccaacact------gactgaggca i rheMac3.chr3 I 47450 C 0 s macFas5.chr3 127714558 1044 - 192294377 ggtgtccaaggtcagcctggtcaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcaggggtctataatcccagctactcaggaggctaaggcagg--------------------------------gagaactgcttgaacccaggaggt-gagcttgccatgagct--gagatcatacc---------actgcacttcagcatgggcgacagaacaaaactccatcttaaaaaaaaa----------------aaaaaaaaa-----------TGCTAGC---------ATGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAGTCCTTCCATTTTAGTAATTGCAAAC-AGTGTGATTCCATTCTGTTTCATCCCCACTCCACTCCAGAGCCAAAA----TAAGAAAATCAATTATATTTCTATTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCACGGCTCCATACTAGTAAAAACAACTTCTTATGTCCTGAGTATCATGGACATTTGATGAATGCTTGTTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCACATTAATCTTGCATCTCAAAAGTAGGACAAATACTGTTCTTTCAGTTTTGTCTAGCCA-AAATGTAGTATTTACACGTATTTAAAAATGGGTTAATAAAAAGAAAATG-AGTT---TGTTCTAGAGAGTATGAGAATTTTGAAAACGTGAATTCTCCTGTCCTGGCACATAGTTAATACTTAGAGGCATATTATTTCATGTAGAAGCTACCATTAAAAGAAATTAATGTTAAAC--------ATTACTTCACATAATCTTCTAACCTGACTTAAGACTGAAGACCTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATCTCTGAAAGGTAAGAATAAATACTTAATATTCACTAGGCAATATTCAGCAAAGTAATATCCACCAGTATATATTTAACATTTCATCACCAAGGGTGGGTGTGAAAAGAAAAGACAgactgggcacagtggc---tcacgcctgtaatcccaacactttgggaggccaaggta i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 58651 1073 - 317753 ggagttcgaggccagtctggccaacatggtgaaacgccaacTCTAcgacaaatacaaaaatgaggcagccatggtggcaggggtctgtaatcccagctacttaggaggctgaggcagg--------------------------------gagaattgcttgaacccaggaggt-cagcttgccatgagct--gagatcgtacctgAGAtcgtactgcactccagcatgggtgatagaacaaaactccatcttaaaaaacaa----------------aaaacaaaa--------aacagctagcAGGTGACATAGGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGcaatctttccattttattaaatCTAAAC-AGTGTGATTCCATTCTGTTTTatccccactccactccagagccaaaa----caagaaaatcaat--tatttctatttctttaaaaacatatctaACTAAGTCATCTAATTAAAAGATAATATGCACGGCTCCATACTCTAAAAGAAAACTTGTTATGTCCTGCATATCATGGACATTTGATGAATGCTTGTTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCAATGCATTATGCCAGATAAATCTGGCATGTCAAAAGTAGGACAAATATTGTTCTTTCAGTTTTGTCTACCTATAAGTgcaatatttacatgtattt-ataacgggttaataaaaagaaaatg-agtttcttATTCTAAAGAGTATGAGAATTTTGACAACATGAATTCTCCTGTCCGAGGACATAATTAATACTCAGAGGCATATTACTTCATGTGGAAGCCACCATTAAAAGAAATCAATGTTACATGTTA----ATTACTTCACATAATCTTCTAATCTGACTTAAGACTGAAAACGTACCTCACGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATGTCTGAAAGGTGacaataaatacttaatattCACTAGTCAATATTCAGTAAAGTAATATCCATCAGTACATATTTAACATTTCATCACCAAGGGTGggtgtgaaaagaaaaaacaggttgggcacagcggctcatcacgcctgtaatcccagtagtttgggaggctgaggca i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124176028 1036 - 127223203 ggtgtccgaggtcagcctggtcaacatggtgaaaccccaactctactacaaatacaaaaattaggcaggcgtggtggcaggggtctataatcccagctactcaggaggctaaggcagg--------------------------------gagaactgcttgaacacaggaggt-gagcttgccatgagct--gagatcatacc---------actgcactccagcatgggcgacagaacaaaactccatcttaaaaaaaaa----------------aaaaaa--------------aGCTAGC---------ACGTGACATTTGCTA-------TGGGGAGACTAGGGATATGATCTTGCTGCAATCCTTCCATTTTAGTAATTGCAAAC-AGTGTGATTCCAT--TGTTTCATCCCCACTCCACTCCAGAGCCAAAA----TAAGAAAATCAATTATATTTCTATTTCTTTAAAAACATATCTAACTAAATCATCTAATTAAAAGATAATATGCATGGCTCCATACTAGTAAAAAAAACTTCTTATGTCCTGAGTATCATGGACATTTGATGAATGCTTGTTCAGTTGACTGGTGTAGACTTCAATAATAACCTGTTCGATGCATTATGCCACATTAATCTTGCATCTCAAAAGTAGGACAAATACTGTTCTTTCAGTTTTGTCTAGCCA-AAATGTAGTATTTACACGTATTTAAAAATGGGTTAATAAAAAGAAAATG-AGTT---TGTTCTAGAGAGTATGAGAATTTTGAAAACATGAATTCTCCTGTCCTGGCACATAATTAATACTTAGAGGCATATTATTTCATGTGGAAGCTACCATTAAAAGAAATTAATGTTAAAC--------ATTACTTCACATAATCTTCTAACCTGACTTAAGACTAAAGACCTACCTCATGAAGCTGATTTATCAAGTTGTAAATCTTCACCTGTTGAATTCATAAGTTCATCTCTGAAAGGTAAGAATAAATACTTAATATTCACTAAGCAATATTCAGCAAAGTAATATCC---AGTATATATTTAACATTTCATCACCAAGGGTGGGTATGAAAAGAAAAGACAgactgggcacagtggc---tcacgcctgtaatcccaacactttgggaggccaaggta i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I a score=189063.000000 s hg38.chr17_GL383563v3_alt 39118 85 + 375691 ggcagatcatgaggtcaggagttcgagaccagcctggccaacatggtaaaaccccgtctgtactaaaagtacaataattagctgg s panTro4.chr4 121861016 85 + 193495092 ggcagatcatgaggtcaggagttcgagaccagcctggccaacatggtaaaaccccgtctgtactaaaagtacaataattagctgg i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27571196 85 + 35968885 ggcagatcatgaggtcgggagttcgagaccagcctggccaacatggtaaaaccccgtctgtactaaaaatacaataattagctgg i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46821293 85 - 99891981 ggcagatcatgaggtcaggagttcgaggccagcctggccaacatggtgaaaccctgcctctactaaaaatacaaaaattagccag i nomLeu3.chr17 I 3560 C 0 s rheMac3.chr3 59838881 85 + 198365852 ggcagatcacaaggtcaggagttcgagaccagtctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127715602 85 - 192294377 ggcagatcttgaggtcaggagttcaagaccagtctgaccaacatggtcaaaccccgtctctactaaaaatacaaaaattagccaa i macFas5.chr3 C 0 I 3752 s papAnu2.JH684865 59724 85 - 317753 ggcagatcatgaggtaaggagatcgagaccagcctggccaacacggtgaaaacccatctgtactaaaaatacaataattagctgg i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124177064 85 - 127223203 ggcagatcttgaggtcaggagttcaagaccagtctgaccaacatggtcaaaccccgtctctactaaaaatacaaaaattagccaa i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I a score=129811.000000 s hg38.chr17_GL383563v3_alt 39203 55 + 375691 gcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaat s panTro4.chr4 121861101 55 + 193495092 gcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaat i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27571281 55 + 35968885 gcatggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaat i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46821378 55 - 99891981 gcatggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaat i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59838966 55 + 198365852 gcattgtggcagatgcttataatcccaggtactcaggaggctgagctaggagaat i rheMac3.chr3 C 0 I 2485 s macFas5.chr3 127719439 55 - 192294377 gcatggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaat i macFas5.chr3 I 3752 C 0 s papAnu2.JH684865 59809 55 - 317753 gcgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaat i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124177149 55 - 127223203 gtgtggtggcagatgcctgtaatcctagatactcaggaggctgaggcaggagaat i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I a score=52371.000000 s hg38.chr17_GL383563v3_alt 39258 29 + 375691 tgcctgaacccaggaggtggaggttgcag s panTro4.chr4 121861156 29 + 193495092 cgcctgaacccaggaggtggaggttgcag i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27571336 29 + 35968885 tgcctgaacccaggaggtggaggttgcag i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46821433 29 - 99891981 tgcctgaatccaggaggtggaggttgcag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127719494 29 - 192294377 tgcctgaacccaggaggtggatgttgcag i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 59864 29 - 317753 tgcctgaacccaggaggcggatgttgcag i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124177204 29 - 127223203 tgcctgaacccaggaggcagagattgcag i chlSab2.chr21 C 0 I 1997 e calJac3.chr2 1462254 1436 + 204313951 I e rheMac3.chr3 59839021 2485 + 198365852 I a score=932454.000000 s hg38.chr17_GL383563v3_alt 39287 763 + 375691 aaaccattatcatgccactgcattccagcctgggcaagagagcaagattctgtc------------tcCATCAATCAATCAATAAAAATATAAGGAGGAAGcatttactgtgtatttatatgtctggtattatgtgaagcactttactatcttatcaaatcttcgggacagatcttcagttctcatgaccacaaaagaggatactaaagctcagacaggagaagagacgtggccaGCCTGTGTCCCCAGGGCCTATGGTCTTACCACTAGGTTACAGTGT--------TTCCAGATATCACATGTTGTGAGATTTTTGCTTTAAAATGAACC-------------AAAAAAAAACCAAAGGTGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCATGTAACTAAAAATATTACGGAAATGTTATTGAATTCATTAGCAAATTTAGTGCTAGGTTTTCATTGAGGAGTAGGTTATATTACTCATGATGA--AG-AAAAATGTTCATTTTAAGTATATTAACATAAATACCATCAATATTGTTTATCATGTTTAAATGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTGTAGTTTGCTAGTAGGTTACAAGTAAATAGTCACCCAAATAAAAACAT--------CA---TGTTTTCCACTGGTTGTTGCTCTTTTTTAGGTGAGTATTTGATGTATATCAACAGAGAGAGGATAATAACAAATCGCTAATTTCTTTCATCACTATATAAAGGTGGCTTCAGGATAGAATAGTATC s panTro4.chr4 121861185 763 + 193495092 aaaccatgatcacgccactgcattccagcctgggcaaaagagcaagattctgtc------------tcaaTCAATCAATCAATAAAAATATAAGGAGGAAGcatttactgtgtatttatatgtctggtattatgtgaagcactttactatcttatcaaatcttcgggacagatcttcagttctcatgaccacaaaagaggatactaaagctcagacaggagaagagacgtggccaGCCTGTGTCCCCAAGGCCTATGGTCTTACCACTAGGTTACAGTGT--------TTCCAGATATCACATATTGTGAGATTTTTGCTTTAAAATGAACC--------------AAAAAAAACCAAAGGCGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCATGTAACTAAAAATATTATGGAAATGTTATTGAATTCATTAGCAAATTTAATGCTAGGTTTTCATTGAGGAGTAGGTTATATTACTCATGATGA--AG-AAAAATGTTCATTTTAAGTATATTAACATAAATACCATCAATATTGTTTATCATGTTTAAATGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCACCCAAATAAAAACAT--------CATG-TGTTTTCCACTGGTTGTTGCTC-TTTTTAGGTGAGCATTTGATGTATACCAACAGAGAGAGGATAATAACAAATCGCTAATTTCTTTCATCACTATATAAAGGTGGCTTCAGGATAGAATAGTATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27571365 763 + 35968885 aaaccacgatcacgccactgcattccagcctgggcaaaagagcaagattctgtc------------tcaaTCAATCAATCAATAAAAATATAAGGAGGAAGcatttactgtgtatttatatgtctggtattatgtgaagcactttactatcttatcaaatcttcgggacagatcttcagttctcatgaccacaaaagaggatactaaagctcagacaggagaagagacatggccaGCCTGTGTCCCCAGGGCCTATGGTCTTACCACTAGGTTACAGTGT--------TTCCAGGTATCACATGTTGTGAGATTTTTGCTTTAAAATGAACC--------------AAAAAAAACCAAAGGCGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCATGTAACTAAAAATATTATGGAAATGTTATTGAATTCATTAGCAAATTTAATGCTAGGTTTTCACTGAGAAGTAGGTTATATTACTCATGATGA--AG-AAAAATGTTCATTTTAAGTATGTTAACATAAATACCATCAATATGGTTTATCATGTTTAAATGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCATCCAAATAAAAACAT--------CATG-TGTTTTCCACTGGTTGTTGCTC-TTTTTAGGTGAGTATTTGATGTATACCAACAGAGAGAGGATAATAACAAATCGCTAATTTCTTTCATCATTATATAAAGGTAGCTTCAGGACAGAATAGTGTA i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46821462 780 - 99891981 aaagcacaatcacgccactgcattccagcctgggcaaaagagcaagattctgtctcaatcaatcaatcaatcaatcaatcaatAAAAATataaagaggaagcatttactgtgtatttatatgcccagtattacgtgaagcactttactatcttatcaaatcttcgggatagatcttcagttctcatgaccaccaaagaggacactagagctcagacatgagaagagacatggccaGCCTGTGTCCCCAGGGCCTACGGTCTTACCACTAGGTTACAGTGT--------TTCCAGTTATCACATGTTGTGAGATTTTTGCTTTAAAATGAACC--------------AAAAAGAACCAAAGGTGAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAAGCACATAACTAAAAATATTATGGAAATGTTATTGAATTCATTAGCAAATTTAATTCTAGATTTTCACTGAGGAGTAGGTTATATTATTCATGATGA--AGAAAAAATGTTC-----AAGTATATTAACATAAATACCATCAATATGGTTTATCACGTTTAAATGTGCACTTAAAGCAATTCAGTTAAAATTCTGCATATCATACAATTTTATAGTCTGCTAGTAGGTTACAAGTAAATAGTCATCCAAATAAAAACAGTTAAAACACATGATGTTTTCCACTGGTTGTTGCTC-TTCTTAGGTGAGCATTTGATATATACCAACAGAGAGAGGATAATAACAAATTGCTAATTTCTTTCATCATTATATAAAGGTGGCTTCAGGATAGAATGGTATA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127719523 777 - 192294377 aaaccacgatcacaccactgcattccagcctgggtgaaacagcaagattctgtc----------------tcaaTCAATCAATAAAAATGTAAGAAGGAAGcatttactgtgcatgtatatgcctggtattatgtgaagcactttactgtcttatcaaatcttcaggatagatcttcagttctcatgaccacaaaagaggacactaaagctcagacaggagaagagacatggccaGCCTGTGTCCCCAGAGCCTACGGTCTTACCACCAGGTGAGACCGTTACACTGCTTCCAGGTATCACATGTTGTGAGATTTTTACTTTAAAATGAACC--------------AAAAAAAACCAAAGGCAAAAAAGGCATAAGCTATTAAAAAGTGGGAGAAACACTAAGAGAACCTTAGGCACGTAACTAAAAATATTATGGAAATGTTACTGAATTCATTAGCAAATTTAATTCTAGATTTTCATTGAGGAGTAGGTTATATTGCTCATGATAAAGAA-AAAAATGTTCACTTTAAGTATATTAACATAAATACCATCAATATGGTTTATCATGTTTAAACGTTCACTTAAAGCAATTCAGTTAAAATTCTGCATCTCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCATCCAAGTAAAAACAG-TAAAACACATGATGTTTTCCACTGGTTATTGCTC-TTTTTAGGTAAGCACTTGATATATACCAACAGACAGAGGATAATAACAAATTGCTAATTTCTTTCATCATTATACAAAGGTGGCTTCCGGACAGAATAGTGTA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 59893 777 - 317753 aaACCATGATCAcattactgcattccagcctgggtgaaagagcaagattctgtc----------------tcaatcaatcaataaaaatataaggaGGAAACATTTACTGTGTATTTATATGCCCGGTATTATGTGAAGCACTTTACTGTCTTATCAGATCTTTGAGATAGATCTTCAGTTCTCATGACCACAAAAGAGGACACTAAAGCTCAGACAGGAGAACAGACATGGCCAgcctgtgtccccagtgcctatGGTCTTACCACTAGGTTACAGTGTT-------TTCCAGGTATCACATATTGTGagatatttgctttaaaatgaaccaaaaaaaaaaaaaaaaaaaaaaccaaaggcaaaaaagCCAT-AGCTATTAAAAAGTGGGAGAAATACTAAGAGAACCTTAAGCACATAACTGAAAATATTACGGAAATGTTACTGAATTCATTAGCAAATTTAATTCTAGATTTTCATTGAGAAGTAGGTTATATTACCCATgatga--aa-aaaaatattcattttaagtaTATTAACATAAATACCATCAATATAGTTTATCATGTTTAAATGTTCACTTAAAGTAATTCAGTTAAAATTCTGCATCTCATACAATTTTATAGTTTGCTAGTAGGTTACAAGTAAATAGTCAtccaaataaaaacag-taaaacacaTGATGTTTTCCACTGGTTGTTGCTC-TTTTTAGGTGAGCATTTGATCTATACCAACAGACAGAGGATAATAAC----TGCTAACttctttcatcattatataaAGGTGGCTTCAGATTAGAATCATATA i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59839021 2485 + 198365852 I a score=117135.000000 s hg38.chr17_GL383563v3_alt 40050 146 + 375691 AGCGCAATGATGAATTTGAAATCTAACATCAATTCAGTGATGCATCAAGAT-AAAAGTAGAGACAACAGGGGCACCTTGGTGAGTACTGAACAt----tttatttatttatttattttgagatggagttttgctctttttgcccaggctac s panTro4.chr4 121861948 146 + 193495092 AGGGCAATGATGAATTTGAAATCTAACATCAATTCAGTGATGCATCAAGAT-AAAAGTAGAGACAATAGGGGCACCTTGGTGAGTACTGAACAt----tttatttatttatttattttgagatggagttttgctctttttgcccaggctag i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27572128 142 + 35968885 AGGGCAATGATGAATTTGAAATCTAACACCAATTCAGTGATGCATCAAGAT-AAAAGTAGAGACAATAGGGGTACCTTAGTGAGTACTGAACAt--------tttatttatttattttgagatggagttttgctctttttgcctaggctag i ponAbe2.chr1_random C 0 C 0 s macFas5.chr3 127720300 149 - 192294377 AGTGCAATGACGAATTTGAAATCTAATGTCAACTCAGTGATGCAGCAAGAT-AAAAGTAGAGACAATAGGGGCACCTTGGTGAGTACTG-ACtttttatttatttatttatttattttgagatggagttttgctccttttgcccaggctag i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 60670 151 - 317753 AGGGCAATGATGAGTTTGAAATCTAACGTCAATTCAGTGATGCATCAAGATAAAAAGTAGAGACAATAGGGGCACCTTGGTGAGTactgaactttttatttatttatttatttattttgagagggagttttgctctttttgcccaggctag i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59839021 2485 + 198365852 I e nomLeu3.chr17 46822242 0 - 99891981 C a score=199350.000000 s hg38.chr17_GL383563v3_alt 40196 169 + 375691 agtgcaatggtgccaacctcgcctcactgcaacctctgcctcctgggttcaagcgattctcctgccttggcctcccgaatagctgggattacagacatgtgccaccatacccgtctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtct s panTro4.chr4 121862094 167 + 193495092 agtgcaatggtg-caacctcggctcaccacaacctctgcctcctgggttcatgcgattctcctgccttggcctcccgaatagctgggattacagacatgcgccaccacacccgtctaattttgtatttttagtagagac-gggtttctccatgttggtcaggctggtct i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27572270 168 + 35968885 agtgcaatggtg-caacctcggctcaccgcaacctctgcctcctgggttcaagcgattctcctgccttggcctcccgaatagctgggattacagacatgcaccaccatgcccgtctaattttgtatttttagtagagacggggtttttccatgttggtcaggctggtct i ponAbe2.chr1_random C 0 M 369 s nomLeu3.chr17 46822242 168 - 99891981 agggcaatggct-caatcttggctcactgcagcctctgcctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacagacatgcgccaccacgctcgtctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtct i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127720449 160 - 192294377 agtgcaatggtg-caacctcggctcaccacaacctctgcctcacgggttcaagcgatcctcctgcctcagcctcccaagtagcagggattacagacatg--------tgcccatctaattttgtatttttagtagagatggggtttctccacattggtcaggctggtct i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 60821 168 - 317753 agtgcaatggtg-caatctcagctcactacaacctctgcctcccgggttcaagcgattctcctgcctcagcctcctgaatagctgggattatagacatgtgccaccatgcctgtctaattttgtatgtttagtagagacagggtttctccatgttggtcaggctggtct i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59839021 2485 + 198365852 I a score=56468.000000 s hg38.chr17_GL383563v3_alt 40365 78 + 375691 cgaactcccgacct-agatatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccagA s panTro4.chr4 121862261 78 + 193495092 cgaactcccgacct-agatatctgcctgccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccagA i panTro4.chr4 C 0 C 0 s nomLeu3.chr17 46822410 78 - 99891981 tgaactcccgacct-agatatctgcctgccttagcctcccaaagtgctgggattacaggcgtaagccactgcacccagc i nomLeu3.chr17 C 0 I 47 s macFas5.chr3 127720609 79 - 192294377 tgaacgcccgacctcaagtatctgcctgtctcgacctctcaaagtgctgggattacaggcgtgagccaccatgcccggA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 60989 79 - 317753 cgaactcgtgacctcaggtatctgcctatctcgacttcccaaagtgctgagattaccggcatgagctaccgcgcccaga i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59839021 2485 + 198365852 I e ponAbe2.chr1_random 27572438 369 + 35968885 M a score=94817.000000 s hg38.chr17_GL383563v3_alt 40443 56 + 375691 TGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTTAAAAAAATAAT s panTro4.chr4 121862339 56 + 193495092 TGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTTAAAAAAATAAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27572807 56 + 35968885 TGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTCAAAAAAATAAT i ponAbe2.chr1_random M 369 C 0 s nomLeu3.chr17 46822535 56 - 99891981 CGAATTCCAAATTTAACAAAGCAGACTAAGAGAAACAATTCATTTAAAAAAATGAT i nomLeu3.chr17 I 47 C 0 s rheMac3.chr3 59841506 56 + 198365852 TGAATACCAAATTTAACAAAGCAGATTAAAAGAAAAAATTAGTTTCAAAAAATAAT i rheMac3.chr3 I 2485 C 0 s macFas5.chr3 127720688 56 - 192294377 CGAATTCCAAATTTAACGAAGCAGACTAAGAGAAACAATTCATTTTAAAAAATAAC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 61068 56 - 317753 tGAATTCCAAATTTAACAAAGCAGACTaagagaaataattcattttaaaaaacaat i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I a score=333191.000000 s hg38.chr17_GL383563v3_alt 40499 301 + 375691 ATTTggccaggcatggtggctcacacctataatcccagcactttgggaggctgaggtgagtggatcaggaggtcagcagttcaagaccagcctagccaagatcatgaaaccccgtctctactaaaaat----acaaaaatcagccaggcgtggtggctggtgcctgtaatcctagctgctcgggaggctgaggcagagaactgcttgaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagtgaggctccgtctcaaaaaaaataaataaaTA- s panTro4.chr4 121862395 301 + 193495092 ATTTggccaggcgtggcggctcacacctgtaatcccagcactttgggaggctgaggtgagtggatcaggaggtcagcagttcaagaccagcctagccaagatcatgaaaccccgtctctactaaaaat----acaaaaatcagccaggcgtggtggctggtgcctgtaatcctagctgctcgggaggctgaggcagagaactgcttgaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagtgaggctccgtctcaaaaaaaataaataaaTA- i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27572863 305 + 35968885 ATTTggtcaggcatggcggctcacacctgtaatcccagcactttgggaggctgaggtgagtggatcaggaggtcagcagttcaagaccagcctagccaagatcatgaaaccccgtctctactaaaaatacaaacaaaaatcagccaggcgtggtggctggcacctgtaatcccagctgctcgggaggctgaggcagagaactgcttgaacccaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagcctgggaaacagagtgaggctctgtctcaaaaaaaataaataaaTA- i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46822591 273 - 99891981 ATTTggccaggcacagtggctcacacctgtaatgccagcacttttggaggccaaggcgggtggatcaggaggtcaggagttcaaaaccagcctggccaagatcgtgataccctgtctctactgaaaat----acaaaaatcagcgaggcatggtggctgacgcctgtaattccagctgctcagg------------------------acgcgggaggctgaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaatagagcgaggctctgtctcaaaaaa---aaat-aata- i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127720744 288 - 192294377 ATTTggccaggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtgga--------tcagcagttcaagaccagcctggccaagatcatgata--ccgtctct--taaaaat----acaaaaatcagccagacgtggtggctggcgcctgtaaacccagctgctcaggaggctgaggcagagaactgcttcaacccaggaggcagaggttgcaatgagcagagatcacaccactgcactccagcctgggtgacagagtgaggctctgtctcaaaaaaTAATAAT-AATA- i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 61124 301 - 317753 atttggccaggcatggtggctcacacctgtaatctcagcactttgggaggctgagatgagtagatcaggaggtcaggagttcaagaccagcctagccaagatcgtgaaaccccgtctctactaaaaat----acaaaaatcagccaggcatagtggctgacacctgtaatccaagctgcttgggaggctgaggcagagaactgcttgaacccgggaggcggaggttgtggtgagctgagatcacgccactgcactccagcctgggtgacacagcgaggctccgtctcaaaaaaaaaaaaa-aaaaa i papAnu2.JH684865 C 0 I 10 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59841562 0 + 198365852 C a score=1580852.000000 s hg38.chr17_GL383563v3_alt 40800 981 + 375691 ATTCAATGAAATTCCTAAGATCCAGGGCTTTGcaataaatatgtaaataaatatccaatctccatactgaaagtttaaaagaaatgctaactaataactaaagaaatacaacttttcctcagctttgcagcaatctagaaACAAAGTGTG-----------TAGAC----ACTACAAAGCACCTTACAAGGAGAAACATGTAAGGATGGCATGACTCGCCGGCAGCCCTGGGCTTGTCCACGGTACCCCCATGATGAACAGTAACTCCACTGTGTAAACGCCCATGAACATAAGATTACAAGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAGTTTGTTTACGTAGATCAGCGATACGATGATTCCATTTCTCTGAAAACCAAGCAAAAGTTGCTTCTCAATAACACGTCCCTATGTCAGAGCAGCACTAACGTATAATGACTGATTTCATATATTTTACATTCTAACAGTCCATATCATTTTACTGCTTTC-AAGAAAAAATTTCCCCTTCTTGGTGGTTCTTAGAATTGGTTTAATGGGAGACTATTAGAGAAG-------------------------------------CTGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACAATAACAGGGAGGTCACAATGAGGCGGTCTCCAGGGGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GAAATAAGACTTTACAGCAgccgggtgcagtggtgcaggcctgtaatcccagcactttggcagcacaggcaggcggatcactttgagctcagggcaacatag-ccaaaacccccctccctagccc---------------cacccccaccccgtccctaccaaaaatacaaaac--agcagggcatggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacctgaacccaggaggcagacattgcagtgagccaagatcacgccactgccagcctggatgacagagcaagactccacctcaaaa-----aa s panTro4.chr4 121862696 977 + 193495092 ATTCAATGAAATCCCTAAGATCCAGGGCTTTGCAAAAAATATGTAAATAAATTTCCAATCTCCATACTGAAAGTTTAAAAGAAATGCTAACTAATAACTAAAGAAATACAACTTTTCCTCAGCTTTGCAGCAATCTAGAAACAAAGTGTG-----------TAGAC----ACTACAAAGCACCTTACAAGGAGAAACGTGTAAGGATGGCATGACTCGCCGGCGGCCCTGGGCTTGTCCACGGTACCCCCATGATGAACAGTAACTCCATTGTGTAAACACCCATGAACATAAGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAATTTGTTTACGTAGATCAGCGATACGATGATTCCATTTCTCTGAAAATCAAGCAAAAGTTGCTTCTCAATAATACGTCCCTATGTCAGAGCAGCACTAACGTATAATGACTTATTTCACATATTTTACATTCTAACAGTCAATATCGTTTTACTGCTTTC-AAGAAAAAATTTCCCCTTTTTGGTGGTTCTTAGAATTGGTTTAATGGGAGACTATTAGAGAAG-------------------------------------CTGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACAATAACAGGGAGGTCACAATGAGGCGGTCTCCAGGGGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GAAATAAGACTTTACAGCAgccgggtgcagtggtgcaggcctgtaatcccagcactttggcagcagaggcaggcggatcgctttgagctcagggcaacatag-ccaaaacccccctccctagccc---------------cacccccaccccgtccctaccaaaaatacaaaac--agcagggcatggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacctgaacccaggaggcagacattgcagtgagccaagatcacgccactgccagcctggatggcagagcaagactccacctcaa--------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27573168 972 + 35968885 ATTCAATGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTTCCAATCTCCATACTGAAAGTTTAAAAGAAATGCTAACTAATAATTAAAGAAATACAACTTTTCCT--------CAGCAATCTAGAAACAAAGTGTG-----------TAGAC----ACTACAAAGCACCTTACAATGAGAAACGTGTAAGGATGGCATGACTCGCCGGCAGCCCTGGGCTTGTCCACGGTACCCCCATGATGAACAGTAACTCCATTGTGTAAACGCCCATGAACATAAGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAATTTGTTTACGTAGATCAGCGATACGATTATTCCATTTCTCTGAAAATCAAGCAAAAGTTGATTCTCAATAATACGTCCCTATGTCAGAGCAGCACTAACATATAATGACTTATTTAATATATTTTACATTCTAACAGTCCATATCATTTTACTGCTTTC-AAAAAAAAAATTCCCTTTTTTGGTGGTTCTTAGAATTGGTTTAATGGGAGACTATTAGAGAAG-------------------------------------CTGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACAATAACAGGGAGGTCACAATGAGGAGGTCTCCAGGGGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGT-GAAATAAGACTTTACAGCagctgggtgcagtggtgcaggcctgtaatcccagcactttggcagcagaggcaggcggatcgctttgagctcagggcaacatag-ccaaaacccccttccttaaccc---------------cacccccaccccgtccctaccaaaaatacaaaac--agcagggaatggtggcaggcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacccagaaggcagacgttgcagtgagccaagaccacgccactgccagcctggatgacagagcaagactccacctcaa-a-----aa i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46822864 974 - 99891981 aTTCAATGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTCCCAATCTCCATGCTGAAAGTTTAAAAGAAATG----CTAATAATTAAAGAAATACAACTTTTCCTTAGCTTTGCAGCAATCTAGAAACAAAGAATG-----------TTTCT----AATATTA--CACCTTACAAGGAGAAACGTGTAAGAATGGCATGACTCAGCGGCAGCCCTGGGCTTGTCCACGGTACCCCCATGATGAACAGTAACTTCATTGTGTAAATGCTCATGAACAAAGGATTACATGACTTTTCCAGTTTAGACATATCATATTTTCTTTCAGACAATTCTTCAACTCGTTTACGTAGATCAGTGATAAGATTATTCCACTTCTCTAAAAATTGAGCAAAAGTTGATTCTCAATAATACGTCCCTATGTCAGAGCAGCACTAACATATAAGAACTTATTTCATATATTTTACATTATAACAGTCCATATCATTTTACTACTTTC-AAAAAAATTTTTCCCTTTTTTGGTGGTTCTTAGAATTGGTTCAATGGGAGACTGTCAGAGAAG-------------------------------------ATGAAAAACAGGAGGGCAGAAAAGTTCAATCAAATTAAACACAGTAACAGGGAGGCCACAATGAGGAGGTCTCCAGGTGTCTTTTAGCAAACTTCCTAAAACATGTCTCAGCTGTGTGGAAAGAAGACTTTACAGCAgccaagtgtggtggtgcaggcctgtaatcctagcactttggcagcagaggcaggaagactgctttgagctcatggcaacatag-ccaaaacctccctccccacccc---------------ca-------cccatctctaccaaaaatacaaaac--tgcagggcgtggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggatgcagacattgcagtaagctgagactgcaccactgccagcctggacgacagagcaagactccacctcaaaaaagacaa i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59841562 1034 + 198365852 ATTCAATTAAATTCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATCCCCAATATCCATGCTGAAAGTTTAAAAGAAATGCTAAC-GATAATTAAACAAATACTACTTTTTCTCAGCTTTGCAGTAATATAGAAACAAAGAATGTTTCTAATATTTAGACAGAAACTACAAAGCAACTTACAAGGAGAGACGTGTAAGGATGGTAGGATTCACCAGCAGCCCTGGGCTTGTCCACAGTACCCCCATGATAAACAATAACTCCATTGTGTA------TATGAACAAAGTATTACACGACTTTTCCAATTTAAACATACTGTATTTTCTTTCAGACAATTCTTCAACTTATTTACATAGATCAATGATATGATTATTCCATTTCTCTGAAAACTGAGCAAAAGCTGATTCTCAATAATATGTCCCTAGGTCAGAGCAGCACTAACATAT---GACTTATTTCCTACATTTTACATACTAACAGTCTATATCATTTTACTGCTTTT-GGAAACATTTTTCCCTTTTTTGGTGGTTCTTAGAATTAGTTTAATGGGAGACTATAAGAGATGTTTTAAAGTTTAGTACCTCTTTTTAACCTTTTAATTTCTGAAAAGCAGGAAGGCAGAAAAGATCAATCAAATTAAACACGACAACAGGCAGGCCACAATGAGGAGGTCTCCGGGGGTCTTTTAGCAAACTTCCTAAAACTTGTCTCAGCTGTGTGGAAATAAGATTTTACAGTggctgggttcagtggtgcaggcctgtaatcctagcactttgggagcagaggtgggcggatcactttgagctctgggcaacaaag-caaaaacccccctcccctccccaaccccttgcctccgcc-------cccatctctatcaaaaatacaaaacttagccggacatggtgtcaggtgcctgtagtcccagctactcaggaggctaaggcaggagaatcacttgaacccaggatgcagatgttgcagtgagccaaggccgcaccactgccagcctgggtgacagagcaagactctgtctcaaaa-----aa i rheMac3.chr3 C 0 I 33 s macFas5.chr3 127721032 982 - 192294377 ATTCAGTGAAATCCCTAAGATCCAGGGCTTTGCAATAAATATGTAAATAAATTCCCAATCTCCATGCTGAAAGTTTAAAAGAAATGCTA----ATAATTAAAGAAACACAACTTTTCCTTAGCTTTGCAGCAATTTAGAAACAGAGAGTGTTTCCAATATTTAGAC----ACTACGAAGCACCTGACAAGGAGAAACGTGTAAGGA-GGCATGACTCACCGGCAGCCCTGGGCCTGTCCACGGTACCCCCATGATGAAGAGTAACTCCACTGTGTAAATGCTCATGAACACAGGATTACAGGACTTTTCCAGTTTAGACATACCATATTTTCTTTCAGACAATTCTTCAACTTGCTTATGTAGATCAGCAATACGATTATTCCATTTCTCTGAAAACTGAGCAAAAGCTGATTCTCAATAATACATCCCTATGTCAGAGCAGCACTAACATATAAGAACTTATTTCATATATTTTACATTCTAACAGTCCACATCATTTTACTGCTTTC-AAAAAAAAATTTCCCTTCTTTGGCGGTTCTTAGAATTGGTTTAATGAGAGACTATTAGAGAAG-------------------------------------CTGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACGGTAACAGGGAGGCCACAATGAGGAGGTCTCCAGGGGTCTTTTAGGAAACTTCCTAAAACATGTCTCAGCTGTGTGGAAATAAGACTTTACAGCAgctgggtgtggtggtgcaggcctgtaatcctagcacttcggcagcagaggcaggcagatggctttgagctcagggtaacatagccaaaaactcccctccccacccc---------------ca-------cccatctctaccaaaaatacaaaac--agccaggcatggtggtgggtgcctatagtcccatctactcaggaggctgaggcaggagaatcacttgaacccaggaagcagacattgcagtgagccgagaccatgctactgccagcctggatgacagagcaacactccacctcaaaa-----aa i macFas5.chr3 C 0 I 5 s papAnu2.JH684865 61435 983 - 317753 attcaatgaaatccctaAGATCCAGGGCTTtgcaataaatatgtaaataaattccCAATCTCCATGTTGAGagtttaaaagaaatgctaactaataattaaagaaatacaacttTTCCTTAGCATTGCAGCAATCTAGAAACAAAGAATGTTTCCAATATTTAGAC----ACTACAAAGCACCTGACAAGGAGAAACGTGTAAGGA-GGCATGACTCACCGGCAGCCCTGGGCCTGTCCACGATACCCCCATGATGAAGAGTAACTCCACTGTGTAAATGCTCATGAACACAGGATTATAGGACTTTTCCAGTTTAgacataccatattttctttcagaCAATTCTTCAATTTGTTTACGTAGATCAGCGATACAATTATTCCATTTCTCTGAAAATCGAGCAAAAGTTGATTCTCAATAATACGTCCCTATGTCAGAGCAGCACTaacatataatgacttatttcatatattttatattctaacaATCCACATCATTTTactgctttcaaaaaaaaaacttccctttTTTGGTGGT--TTAGAATTGGTTTAACGGGAGATTATTAGAGAAG-------------------------------------CTGAAAAGCAGGAGGGCAGAAAAGTTCAATCAAATTAAACACGGTAACAGGAAGGCCACAATGAGGAGGTCTCCAGGGGTCTTTTAGCAAACTTCCTGAAACATGTCTCAGCTGTGT-GAAATAAGACCGTAcagcagccgggtgtggtggtgcaggcctatgatcctagcactttggcagcaGAGACAGGCGGATCGCTTTGAGCCAAGGGCAACACAG-CCAAAaccccactccccatccc---------------ca-------cccgtctccaccaaaaatacaaaac--agccgggcacggtggcgggcgcctgtagtctcagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcagacgttgcagtgagccgagaccacgccactgccagcctggatggcagagcaagactccatctcaaaa-----aa i papAnu2.JH684865 I 10 I 14 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I a score=21542.000000 s hg38.chr17_GL383563v3_alt 41781 22 + 375691 aacaaaaacaaaaaCACAAGGT s panTro4.chr4 121863673 19 + 193495092 ---aaaaacaaaaaCACAAGGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27574140 22 + 35968885 aacaaaaacaaaaaCACAAGGT i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46823838 22 - 99891981 aacaaaaacaaaaaCACAAGGT i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127722019 20 - 192294377 aacaaaaaC--AAAAACAAGGT i macFas5.chr3 I 5 C 0 s papAnu2.JH684865 62432 19 - 317753 aacaaaaa---aaacacaaggt i papAnu2.JH684865 I 14 I 1 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59842596 33 + 198365852 I a score=76842.000000 s hg38.chr17_GL383563v3_alt 41803 45 + 375691 TAAGAGGGACCCCCGACCTTACAGATACAAGTTTAAGAGGGACCC s panTro4.chr4 121863692 45 + 193495092 TAAGAGGGACCCCCGACCTTACAGATACAAGTTTAAGAGGGACCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27574162 45 + 35968885 TAAGAGGGACCCCAGACCTTACAGATACAAGTTTAAGAGGGACCC i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46823860 45 - 99891981 TAAGAGGGACCCCAGATCTTAAAGATACAAGTTTAAGAAGGATCC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59842629 45 + 198365852 TAAGAGGGACCCCAGACCTTAAAAATACAAGTTTAAGAGGGACCC i rheMac3.chr3 I 33 I 352 s macFas5.chr3 127722039 45 - 192294377 TAAAGGGGACCCCAGACCTTAAAGGTACAAGTTTAAGAGGGACCC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 62452 45 - 317753 AAGGGGGGACCCCAGACCTTACAGATACAAGTTTAAGAGGGACTC i papAnu2.JH684865 I 1 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I a score=1608471.000000 s hg38.chr17_GL383563v3_alt 41848 1372 + 375691 CTAAGCAAAAAATGCCAACCCCTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaactggtgaacatgaccttatatggcaaaaggagctttgcagatataatgaagttaagggtctt----tggctttt------ggggttgatgtactcactcggatccttgtaagagcagagcaggtgatggagag-ggtgggaggtgtagtgacagaagcaggaaactccagtcattcgagacgggcagcacaagctgcagagtgcaggccacctctacggccaggaaacggattctcccgcagagcctcggaagctaccgaccctgctcccaccttgactcagtaggacttactgtagaattctggccttcagacctgtaagggaatacattttggttgttttaagtcactacgtgtgtggtaatttgttgcagcagccacaggaaactagtaTTGTAGTGAAGCCTCAAAACCCCCCTGAAGGggctgggctcagtggctcatgcctgtaatcccagcactttgggaggccgagatgggtggatcacttgaggtcaggagttc-gagaccagcccagccaacatggtgaaatgccatctatacaaaaaatacaaaaactagccgggcatggtggcacatgcctgtaatctcagctactcaggaggctgagacaggagaattatttgaaccc----a-----ggggggcagaggttgcagtgaactgagattccaccactgcactccagcctgggtgacag-agcgacgctccatctcgaaaac-aaaacaaaacaa---aaaaaCCCCACCT---GAAGGTTTCCAGTTCTGCCAGCACTCTCCCACCCAACCCCCAGAAACAGACATTCCATTGCTGTGGGCCATGGACAGGCAGAAGGAAGCACCTCCTCATGGCAGAGGCCTACCCAGGAGAAACCCAAGGGAAGGCACTACTGGGCTGGCCCCTCTCTGCCAAGGCCATA----------------ttc-------------ttttttttttgagg-ccagtttcactctgtctcccagactggagtgcaggggcacaatctcggctcacttcgacctctgcctccccagttcaagtgattctcctgcctcagtctcctgagtagctgggatgacaggagtgtagcatgcctagctaatttttgtatttctagtagagatgcggttttgccatgttgcccaggctggactcgaactc---gcctcaagtagtccacctgtctcagccccgcaaagtgctggtattacaggagtgagccactgcacccagcATTTGCCAAGACCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGTCTGGTCTGGCTCTGCCCC s panTro4.chr4 121863737 1376 + 193495092 CTAAGCAAAAAATGCCAACCCTTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaactggtgaacatgaccttatatggcaaaaggggctttgcagatataatgaagttaagggtctt----tggctttt------ggggttgatgtactcactcggatccttaaaagagcagagcaggtgatggagag-ggtgggaggtatagtgacagatgcaggaaactccagtcattcgagacgggcagcacaagctgaggagtgcaggccacctctacggccaggaaacggattctcccgcagagcctcggaagccaccgaccctgctcccaccttgattcagtaggacttactgtagaattctggccttcagacctgtaagggaatacattttggttgttttaagtcactaagtgtgtggtaatttgttgcagcagctacaggaaactagtaTTGTAGTGAAGCCTCAAAACCCCCCTGAAGGggctgggctcagtggctcatgcctgtaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagttc-gagaccagcccggccaacacggtgaaatgccatctatacaaacaatacaaaaactagccgggcatggtggcacatgcctgtaatctcagctactcaggaggctgagacaggagaattgtttgaaccc----a-----ggggggcggaggttgcagtgaactgagattccaccattgcactccagcctgggtgacag-agtgacgctccatctcgaaaac-aaaacaaaacaa---aaaaaCCCCACCT---GAAGGTTTCCAGTTCTGCCAGCAGTCTCCCACCCAACCCCCAGAAGCAGACATTCCATTGCTGTGGGCCATGGACAGGCAGAAGGAAGCACCTCCTCATGGCAGAGGCCTACCCAGGAGAAACCCAAGGGAAGGCACTGCTGGGCTGGCCCCTCTCTGCCAAGGCCATA----------------ttc------------tttttttttttgagg-ccagtttcactctgtctcccagactggagtgcaggggcacaatctcggctcacttcgacctctgcctccccagttcaagtgattctcctgcctcagtctcctgagtagctgggattacaggagtgtagcatgcctagctaatttttgtatttctagtagagatggggttttgccatgttgcccaggctggactcgaactccttgcctcaagtagtccacctgtctcagccccgcaaagtgctgggattacaggagtgagccactgcacccagcATTTGCCAAGACCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGTCTGGTCTGGCTCTGCCCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27574207 1349 + 35968885 CTAAGCAAAAAATGCCAACCCTTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAATAGTTTTGCAGCCTAGCTGTAgcagactgatgcccccaagatgcccacatcctaatcccgggaactggtgaacatgaccttatatggcaa---------------------------aagggtctt----tgGCTTTT------GGGGTTGATGTACTCACCCGGATCCTTATAAGAGCAGAGCAGGTGATGGAGAG-GGTGGGAGGTGTAGTGACAGAAGCAGGAAACTCCAGTCATTCGAGACgggcagcacaagctgaggggtgcaggccacctccacggccaggaaacggattctcccgcagagcctcggaagccaccgagcctgctcccaccttgactcagcaggacttactgtagaattgtggccttcagacctgtaagggaatacattttggttgttttaagtcactaagtgtgtggtaatttgttgcagcagccacaggtaactagtaTTGTAGTGAAGCCTCAAAACCCCCCTGAAGGggctgggctcagtggctcatgcctataatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagttc-aagaccagcctggccaacatggcgaaatgccatctatacaaaaaatac-aaaattagccgggcatggtggcacatgcctgtaatctcagctactcaggaggctgagacaggagaattgtttgaaccc----a-----gtggggcggaggttgcggtgaactgagattccaccactgcactccagcctgggtga-ag-agcgacgctccatctcaaaaac-aaaacaaaacaa---aaaaaCCCCACCT---GAAGGTTTCCAGTTCTGCCAGCAGTCTCCCACCCAACCCCCAGAAGCAGACATTCCATTGCTGTGGGCCATGGACAGGCAGAAGGAAGCGCCTCCTCATGGCAGAGGCCTACCCAGGAGAAACCCAAGGGAAGGCACTGCCGGGCTGGCCGCTCTCTGCCAAGGCCATA----------------ttc-----------ttttttttttttgaggcccagtttcactctgtctcccagactggagtacaggggcacaatctcagctcacttcgacctctgcctccccagttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggagtgtagcatgcctagctaatttttgtatttctagtagagatggggttttgccatgttgcccaggctggactcgaactccttgcctcaagtagtccacctgtctcagccccccaaagtgctgggattacaggagtaagccaatgcacccagcATTTGCCAAGATCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGCCTGGTCTGGCTCTGCCCC i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46823905 1403 - 99891981 CTAAGCAAAAAATGCCAACCCTTTTTCTCCCAATCATTGAAACACCAGGAGGGTGTAATAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaaccagtgaacatgaccttatatggcaaaaggggctttgcagatataatgaagttaagggtctt----tggcttgtactggcggggctgatgtactcacccggatccttatgagagcagagaaagtgatggagag-ggtgggaggtatagtgatggaagcaggaaactccagtcattcgagacggggagcacaagctgagaagtgcaggctgcctccggggccaggaaatggattctcccacagagcctcggaaggcaatgaccctgctcccaccttgcctcagtgggagttactttagaattctggctttcagaaccgtaagggaatacatttgtgttgttttaagtcattaagtgtgtggtaatttgttgcagcagccataggaaactagtaTTGTAGTGAAGCCTCAAAACCCACCTGAAGGggctgggctcggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacttgaggtcaagagttc-gagaccagcctggccaacatggcgaaacgccgtctctacaaaaaatacaagaattagccgggcatggtggcacatgcctgtaatctcagcaacccaggaggctgagatgtgagaactgtttgaacccgtggg-----tgggggtggaggttgcagtgagctgagattgcgccactgcactccagcctgggtgacag-agtgaggctccatctcgaaaataaaaacaaaacaaaccaaaaaTCCCACCTGAAGAAGGTTTCCCGTTCTGCCAGCGGTCTCCCACCCAACCACCAGAAGCAGACATTCCATTGCTGTGGGTCATGGACAGGCAGAAGGAAGCGCCTCCTCATGGCAGAGGCCTACCCAGGAGGAACCCAAGAGAAGGCACTGCCGGGCTGGCCC--CTCTGCCAAGGCCATA----------------ttctttttttttgtttttttttttttcagacacagtttcactctgtctcccagactggagtg-aatggcacaatctcggctcacttcgacccctgcctcccgggtttaagcaattctcctgcctcagcctcccgagtagctgggattacaggagcgtagcacgcctagctaatttttgtatttttagtagagatggggttttgccatgttgcccaggctagactcgaactcctggcctcaagtgattcacctgtctcagcctcccaaactgctgggattacaggactgagccaccgcacccagcACTTGCCAAGACCTTTGATGGCAGGCTTTTTCCAGGTGATCAGTCCTTGTCTGGTCTGGCTCTGCCCC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127722084 1408 - 192294377 CTAAGCAAAAAATGCCAACCCTTTTTCTCTCAATCTTTGCAACACCAGGAGGGTGTAACAGTTTTGCAGCCTAGCtgtagcaggctgatgcccccaagatgcccatatcctaatcccgggaactggtgaacatgaccttgtatggcaaaaggggctttgcagatataatgaagttaagggtctttggctggcttgtactggcggggttaatgtactcacccagatccttataagagcagagaaggtgatggagag-ggtgggaggtgtagtgacggaagcaggaaactccagtcattcaggacatgcagcacaagctgagaagtgcaggccgcctccagggccaggagacagattctcccgcagagcctcagaaggcaacaaccctgctgccaccttgcttcagtgggacttactttagaattctggtcttcagaactgtaagggaatacattcgtgttgttttaagtcactaagtgtgtggtaatttgttgcagcagccacgggaaccta-----gtaGTAAAGCCTCAAAACCCATCTGAAGGggctgggctcggtggctcatgtctgtaatcccagcactttgggaggccgaggaggagagatcacttgaggtcaggagttc-aagaccagcctggccaacgtggcgaagtgccatctctacaaaaaatacaaaaattagccgggcatggtggcacatacctgtaatctcagctactcaggaggctgagacatgagaattgtttgcacct----ggggttggggggtggaggctgcaatgagctgagattgcaccactgcactcccgcctgggtgacaagagcgaggctctatctcgaaaacaaaaacaaaacaaactaaaaaaCCCACCTGAAGAA-GTTTCCAGTTCTGCCAGCAGTCCCCCACCCAACCCTTGGAAGCAGACATTCCATTGCTGTGGGCCATGGACAGGCAAAAGGAAGCACCTCCTCGTGGCAGAGGCCTACCCAGGAGAAACCCAAGGGAAGGCACTGCCTGGCCAGGCT--CTCTGCCAAAGCCATATTATGGTGttttttgtttt-----------tgtttttgttttgagacacagtttcactctgtctcccagactggagtgcagtggcacaatcttggctcacttcgacctctgcctccccagtttaagcaattctcctgcctcagcctcctgagtagctggaattacaggaacatagcacgcctagctaatttttttatttttagtagagatggggttttgccatgttgcccaggctagacttgaacaccttacctcaagtgatccacctgtctcagcctcccaaactgctgggattacaggagtgagccaccgcacccagcACTCGCCAAGGCCTTTGATGGCAGGCTTTTTCCAGGGGATCAGTCCTGGTCTGGTCTGGCTCTG-CCC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 62497 1356 - 317753 CTAAGCAAAAAATGTAAACCCtttttttCCCAATCATTGAAACACCAGGAGGGTGTAATAGTTTTGCGGCTTAGCTGTAGTAGGCTGATGCCCCCAAGATGCCTACATCCTAATCCCAGGAACTGGTGAACATAACCTTATATAGCAAAAGGGGCTTTGCAGATATAATGAAGTTAAGGGTCTTTGGCTGGCTTGTACCGGCAGGGTT-ATGTACTCACCCGGATCCTTATAAGAGCAGAGCAGGTGATGGAGAGCGGAGGGAGGTATAGTG---------GGAAACTCCAGTCATTTGAGACAGGAGGCACAAGCTGAGGAGTGCATGCCGGCTCCAGGGccaggaaatggattctcctgcAGAGCCTCGGAAGGCACCGACCCTGCTCCCACCTTGACTCAGTGGGACTTACTGTAGaattctggccttcagaactgtaagggaatatatttgggttgttttaa---------------gtaatttgttgcagcagctaCAGGAAACTAGTATTGTAGTGAAGCCTC-AAACCCACCTGAaggggctgggctcggtggctcatgcctgtaatcccagcactttgagaggctga-gcggCGAAtccacttga-gtcaggagttcgaagaccagcctggtcaacatg--caaATGCCATCTatacaacaaacacaaaaattagccaggcatggtgggacatgcctgtaatctcagctactcaggaggctgagacatgagaattgtttgaaccc----g-----gggggacagaggttgcagtgagctgagattgcgccactgtactccagcctgggtgacac-agcgacgCTCCATCtcg------gaaacaaaacaa---aaaaacccctcctGAAGAAGGTTTCCAGTTCCACCAGCAGTCCCCCACCCAACCCCCAGAAGCAGACATTCTCTTGCTGTGGGCCATGAACAGGCAGAAGGAAGTGCCTCTTCACGGCACAGGCCTACCCAGGAGAAACCCAAGGGAAAGCACTGCCGGGCTGACCC--CTTTGTTAAGgccata----------------ttt-----------ttctctttttttgcagcccagtttcactctgtctcccagactggagtgcagtggcacaatcttggctcacttcaacctctgcctccccagttcaagtgattctcctgcctcagcctcctgagtagctgggatgacaggagcgtagcttgcctagctaatttttctatttttagtagagatggggttttgcgatgttgcccaggctggactcgaactccttgcctcaagtagtccacctgtctcagcctcccaaactgctgagattacagtagtgagccaccgcacccagcactCACCAATACCTTTGATGGCAGGCTTTTTCCAGGGGATCAGTCCTGGTCTGGTCTGGCTCTGCCCC i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1462254 1436 + 204313951 I e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59842674 352 + 198365852 I a score=1135794.000000 s hg38.chr17_GL383563v3_alt 43220 714 + 375691 ACTCTCCTTCTCACCTAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCCAATCCCAGCTTGGT-----TCAGATCTGCATTTAACTCATGGAACCTGGCTGCTC-CCCAGGTTCTGAAG--AAAAAAACGGTCTCTCT---GTGTGTATGATAAAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGGCAGCCCCAAGAAAAAAAAGAGGCAGCAGAGGGAGCAGGACAGCGCTCACATGGAACTCATGCCACTGCC----TGAGGGGAGGGAGGAGTGCACGCCAGTGACGTCAGGGGGCAGAGAGGCACAGTTCCAGGGCGGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATCGCCTCCAGGTGAGC--CTGCCCACTTTGTGCCCA-----------GGGGCCTGTAGAAAACCACAGCTCCCCATGGTTATGGCCCCAGGAGTGGGGCAGAGCAGGGAGGAGTCCTGGACAGAGGAGAGGCAGGGGTAGGAGGGAGTGGGCCTCAAACTCCAGGA-GGGGGCCCTTCTCATGGGTCCTGCTTTCTGGCTTCTCCTTCCTTACCCCTGGGCTGATCACTTGGGGAAGAACTGGGACAAAGTTTCTCACCCTCAGGCCCAAAGGGTTTAATTACTGGGCCCTTATggaggtg---tgagccccctgaaaggatgc s panTro4.chr4 121865113 718 + 193495092 ACTCTCCTTCTCACCTAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCCAATCCCAGCTTGGT-----TCAGATCTGCATTTAACTCATGGAACCTGGCTTCTC-CCCAGGTCCTGAAG--AAAAAAAGGGTATCTCT---GTGGGTATGATAAAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGGCAGTCCCACGAAAAAAAAGAGGCAGCAGAGGGAGCAGGACAGCGCTCACAGGGAACTCATGCCACTGCCTGAGTGAGGGGAGGGAGGAGAGCACGCCAGTGACGTCAGGGGGCAGAGAGGCGCAGTTCCAGGGCGGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATCGCCTCCAGGTAAGC--CTGCCCACTTTGTGCCCA-----------GGGGCCTGTAGAAAACCACAGCTCCCCATGGTTATGGCCCCAGGAGTGGGGCAGAGCAGGGAGGAGTCCTGGACAGAGGAGAGGCAGGGGCAGGAGGGAGTGGGCCTCAAACTCGAGGA-GGGGGCCCTTCTCATGGGTCCTGCTTTCTGGCTTCTCCTTCCTTACCCCTGGGCTGATCACTCGGGGAAGAACTGAGACAAAGTTTCTCACCCTCAGGCCCAAAGGGTTTAATTACtgggcccttagggaggtg---tgagccccctgaaaggatgc i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27575556 718 + 35968885 ACTCTCCTTCTCACCTAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCTAATCCCAGCTTGGT-----TCAGATCTGCATTTAACTCATGGAATCTGGCTGCTC-CCCAGGTCCTGAAG--AAAAAAAGGGTCTCTCT---GTGGGTATGATAAAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGGTAGCCGCAAGAAAAAAAAGACGCAGCAGAGGGAGCAGGACAGCGCTCACATGGAACTCATGCCACTGCCTGAGTGAGGGGAGGGAGGAGTGCACGCCAGTGACGTCAGGGGGCAGAGAGGCGCAGTTCCAGGGCGGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATCGCCTCCAGGTGAGC--CTGCCCACTTTGTGCCCA-----------GGGGCCTGTAGAAAACCACAGCTCCCCATGGTTACAGCCCCAGGAGTGGGGCAGAGCAGGGAGGAGTCCTGGACAGAGGAGAGGCAGGGGCAGGAGGGAGTGGGCCTCAAACTCCAGGA-GCAGGCCCTTCTCATGGGTCCTGCTTTCTGGCTTCTCCTTCCTTACCCCTGGACTGATCACTCGGGGAAGAACTGAGACAAAGTTTCTCACCCTCAGGCCCAAGGGGTTTAATTACtgggcccttagggaggtg---tgagccccctgaaaggatgc i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46825308 719 - 99891981 ACTCTCCCTCTCACCAAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGAGAGTGTGTACCCCAATCCCAGCTTGGTATGGGTCAGATCTGCATTTAACTCATGGAACCTGGCTGCTCAACTAGGCCCTGAAG--AAAAAAAGGGTC-CTCT---GTGGGTATGATACAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGAGTAACCCAATGTCCCACCAGGTTGGCAGGGCTGGGGAAGGGAAAGTGTTATGACAGCCCTAAGAAAAAAAAGAGGCAGCAGAGGGAGCAGAACAGCGCTCACATGGAACTCATGCCACTGCCTGAGTGAGGGGAGGGAGGAGTGCAC-TCAGTGACGTGAGGGGGCAGAGAGGCGCGGTTCCAGGGCGGCTTTCCCCTTCACTTCCTGCCATGTTACTCTGATCTCCTCCAGGTGAGC--CTGTCTACTTTGTGCCTA-----------GGGGCCTGTAGAAAACCACAGCTCCCCATGGTTATGGCCCCAGGAGTGGggcagagcagggaggagtcctggacagag--gaggcaggggcaggagggagTGGGCCTCAAACTCCAGGA-GGGGGTCCTTCTCATGGTTCCTCCTTTTTGGTTTTTTCTTCCTTA-CCCTGGGCTGATCACCCGAAGAAGAACTGAGGCAAGGTTTCTCACCCTCAGGTCCGAGGGGTTCAATTACCCGGCCCTTAGCGAGTTG---TGAGCCCCCTGAAAGGATGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127723492 724 - 192294377 ACTCTCCCTCTCACCTAGCTGGAATCCCTAGCTCCTTCTCAGTAGAGGAGAGTGTGGACCCCAACCCCAGCTTGGTATGGTTCAGATCTGCGTTTCACTCATGGAACCTGGCTGCTC-CCCAAGCCGTGGAG--AAAAACAGGGTCTCTCT---GCAGGTATGATACAGGATGGGCCTGTCCCCA------------------GGACCCTGTGAGAGGGAAGCCCAATGTCCCACCAGATTGGCAGAGCTGGGAAACAGAAAGTTTTATGATAGCCCTAAGGAAAAAAACAGGCAGCAGAGGAAGCAGGACAGCACTCACATGGAACCCATGTCACTGCCTGAGTGAGGTGAGGGAGGAGTGCACCCCAGTGACATGAGGGGGAAGAGAGGCGCGGTTCTAGGGCAGCTTTCCCCCTCATTTCCTCCCATGTTACTCTGATCCCCTCCAGGTGAGC--CTGCCCACTTTGTGCCCA-----------GGAGCCTGTAGAAAAACACAGCACCAAATGGTTATGGCCCCAGGAGTGGGGCACAGCAGGGAGGAGTCGTGGACAGAGGACAGGCAGGGG-AGGAGGGAGTGGGCCTCAAACTCCAGGA-GGGGGCCCTTCTCATGGGTCCTCCTTTTTGGCTTCTCCTTCTTTA-CCCTGGGCTGATCACCCAGGGAAGAACTGAAGCAAGGTTTCTCACCCTCAGGTCCAAGGGATTCAACTACCGGGCCCTTAGGGAGGTGTGATGAGCCCCCTGAAAGGATGC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 63853 733 - 317753 ACTCTCCCTCTCACCTAGTTGGAATCCCTAGCTACTTTTCAGTAGAGGACAGTGTATACCCCAATCCTAGCTTGGTATGGTTCAGATCTGCATTTAACTCATGGAACCTGGCTGTTC-CCAAGGCCCTGAAG--aaaaaaaGGGTCTCTCT---GTGGGTGTGATACAGGATGGGCCTGTCCCCA------------------GGACCCCGTGGGAGGGAAGTCCAATGTCCCACCAGGTTGGtagggctggggaagggaaagTATTATGGTAGCcccaagaagaaaaagaggcagcagaggcagcaggaCATCACTCCCATGGAACTCATGCCACTGCCTGAGTGAGTGGAGGGAGGAGTGCA-CCCAGTGACGTCAGGGGGCAGAGAGGCACGGTTCCAGGGTGGCTTTCCCCCTCACTTCCTGCCATGTTACTCTGATTCCCACCAGGTGACC--CTGCCCACTTTGTGCCCAGGGTTGCCGCTGGGGCCTGTAGCCAAACACAGCTCCCGATGGTTATGGCCCCAAGAGTGGGGCAGAGCAGGGAGTAGTCCCGGACAGaggagaggcaggggcaggagggagtGGGACTCAAACTGCAGGA-GGGGGTCCTTCTCATGGGTCCTGCTTTTGGGCTTCTCCTTCTTTACCCCTGGGTTGATCACTCGGGGAAGAAATGAGATAAGGTTTCTCACCCTCAGGCCCAAGGGGTTTAATTACGGGGCCCTTAGGGAGGCG---TGAGCCCCCTGAAAGGAtgc i papAnu2.JH684865 C 0 C 0 s calJac3.chr2 1463690 735 + 204313951 ACTCTCCCTCTCACCAAGTTGGAATCCCTAGCTACTTTTCAGAAGAGCAGAGTGTGTACCCCAATCCCAGCTTAGTATGGTTCACATCTGCATTTAACTCATAAAACCTGGCTACTC-CCCATGCCCTGGAGAAAAAAAAAAGGTCTCTCTGTGGTGGGTATCATTCAGGATGGGACTGTTCCCATTCAGGATGGGCCTGCCCTGACCCTATGAGAAGGAAGCCCAGTTTCCCACCAGGTTGGCAGGGCTAGGAAAAGGAACGTGTTATAGTAGCCCCAAGACCAAAAAGAGGCAGCAGAGAGAGTAGGACAGCACTCCTAAGGAACTTATGCTGCTGCCTGAGTGAGGTGAGGAAAGAGTGCACCTCAGTGGCATGGGGGGTCAGAGAGGTGAGGTTCCAGGCTGGCTTTCCTCCTCATTTCCTGCCATGTTCCTCTGATCCCCTCCAGGCAAGCAGTTGCCT----------CT-----------GGAGCCTGTACCCAAACGCAGCCCCCGATGGCCATGGCCCCAGGAGCGGCGC--AGCAGGGAAGAGTCCCGGACAGAGGAGAGGCA-GGCCAGGAAACAGT-GGCCTCTGACTCCAGGAGGGGGGCCCTGCTCATGGATCCTGCTTTCTGGCCTCTTCTCCCTTACTCCTGGGCTGATCACCTGGGGAAGAACTGAGGCAAGGTTTCTCACCCTCAGGTCTGAGGGGTTCAATTACCAAGCccttagggaggtg---tgagccccctgaaatgatgc i calJac3.chr2 I 1436 C 0 e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59842674 352 + 198365852 I a score=154629.000000 s hg38.chr17_GL383563v3_alt 43934 149 + 375691 aagg-------ttttgttt---tgtt-----ttgtttttt-gagacagagtttcactcctgtcgcccaggctggagtgcagtggcgtgatctcaccacactacaacctgcgcctcccaggttcaagtgattctcctgcctcagcctctggagtag----------ctgggattac s panTro4.chr4 121865831 154 + 193495092 aagg-------ttttgttt---tgttttgtgttgtgtttt-gagacagagtttcgctcctgtcgcccacgctggagtgcagtggcgtgatctcaccacactacaacctgcgcctcccaggttcaagtgattctcctgcctcaggctccggagtag----------ctgggattac i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27576274 144 + 35968885 aagg-------ttttgttt---tgtt----------tttt-gagacagagtttcgctcctgtcgcccaggctggagtgcagtggcatgatctcaccacactataacctgcgcctcccgggttcaagtgattctcctgcctcagcctccggagtag----------ctgggattac i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46826027 155 - 99891981 AAGG-------tttttttt---tttggttttttgttttttggagacggagtttcactcttgtcacctaggctggagtacagtggtgcgatctcacctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctccagagtag----------ccaggattac i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127724216 170 - 192294377 AAGgtttttgtttttgtttttgtttt-----ttgttttttggagatggagtttcgctcttgtcaccaaggctggagtgcagtggtgcaatctcacctcactgcaacctctgccccccgggttcaagtgaatctcctgcctcagcctccagagtaggctgtaaggtgtaaggccac i macFas5.chr3 C 0 I 5 s papAnu2.JH684865 64586 149 - 317753 aagg-------ttttgttt---tgtt-----ttgtttttt-gagacggagttttgcttctatcacccaggctggagtacagtggcgcaatcttaccacactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctccagagtag----------ctgggattac i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1464425 0 + 204313951 C e chlSab2.chr21 124177233 1997 - 127223203 I e rheMac3.chr3 59842674 352 + 198365852 I a score=262387.000000 s hg38.chr17_GL383563v3_alt 44083 163 + 375691 aggtggctgccaccacgcctggctaattttttgtatttttagtagagacagggtttcgccatgttgggcaggctggtcttgaactcctgacctcaggtgatccgactggctccgcctcccaaagttctgggatcaca-----tcagccactgtgcttggccacaatga s panTro4.chr4 121865985 163 + 193495092 aggtggctgccaccacgcctggctaattttttgtatttttagtagagacagggtttcgccatgttgggcaggctggtcttgaactcctgacctcaggtgatccgactggctccgcctcccaaagttctgggattaca-----tgagccactgtgcttggccacgatga i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27576418 163 + 35968885 aggtggctgccaccacgcctggctaattttttgtatttttagtagagacagggtttcgccatgttgggcaggctggtcttgaactcctgacctcaggtgatccgactggctccgcctcccgaagttctgggattaca-----tgagccactgtgcttggccacgatga i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46826182 164 - 99891981 aggtggcccccaccacatctgac----tttttgtatttttagtagagatggggtttctccatgtcgggcaggctggtcttgaactcctgacctcaggtgatccaaccggctcagcctcccaaagttctgggattacaggtgttgagccactgcacttggccATGATGC i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127724391 162 - 192294377 aggtggccaccaccacgc----ctaattttttgcatttttagtagagatgaggtttcgccatgttgggcacgctggtctcgaactcctgacctcaggtgatccgaccagctcggcctcccaaagttctgggattacaggcg-tga-ccactgcgcttggccACAATGC i macFas5.chr3 I 5 C 0 s papAnu2.JH684865 64735 167 - 317753 aggtggctgccaccatgcctggctaattttttgtagttttagtagaaacagggtttcaccatgctgggcaggctggtctcgaactcctgacctcaggtgatccaaccggcttggcctcccaaagttctgggaccataggcg-tgagtcactgcgctcgACCACAATGC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124179230 163 - 127223203 aggtggccgccaccacgc----ctaattttttgcatttttagtagagatggggtttcgccatgttgggcacgctggtctcgaactcctgacctcaggtgatccgaccggctcggcctcccaaagttctgggattacaggcg-tgagccactgcgcttggccACAATGC i chlSab2.chr21 I 1997 C 0 e calJac3.chr2 1464425 0 + 204313951 C e rheMac3.chr3 59842674 352 + 198365852 I a score=2252675.000000 s hg38.chr17_GL383563v3_alt 44246 790 + 375691 aaggttttgtgtggagagcatgtacatgcctttctgggaaaacagtccacagctcttattctcagcaggcttcacggtgaaaaaaggttagaacTCTTGCTACAGAGCTGTGGAAGCAGCCAGGTGAGGGGCCTGCCAAGGGCACTCTGGGCACTACCTGGGCA--------------------CTCTCGAGCCCATCATCCCCTAGGCAGGCTGCACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAATCGCCCTGAGATGACCCACAGTCCTCAGCTAGGAAGTGAGCGCTGCATCTCCTGCAGCGTCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACCGGCCCTTGCAGCAAGTGAAAAGCCTATTATTGATTCCCTCCCTAGCCATGTAGACAGT-GAACCAA-GACACTCATATCAGGTAAATGCCTTGTTCTCTGTTACCAAGGTAACCAGTAGGCATTCCCAGATACAGCGAAGGTCCTCACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCTGAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGAGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTCAAGGCAGAAGGACAACCAGGAGACAGCCTGGAAAAAGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAG-GGGAGGTGGGATAGGCTGTAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAGGTGGGGTGTTACCTACACCCT-------CGGGGCCAGATGCA s panTro4.chr4 121866148 790 + 193495092 aaggttttgtgtggagagcatgtacatgcctttctgggaaaacagtccacagctcttattctcagcaggcttcacggtcaaaaaaggttagaacTCTTGCTACAGAGCTGTGGAAGCAGCTAGGTGAGGGGCCTGTCAAGGGCACTCTGGGCACTACCTGGGCA--------------------CTCTCGAGGCCTTCATCCCCTAGGCAGGCTGCACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGTGGTGCATCTCCTGTGGCATCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTGGCCCTTGCAGCAAGTGAAAAGCCTATTATTGACTCCCTCCCTAGCCATGTAGACAGT-GAACCAA-GACACTCATATCAGGTAAACGCCTTGTTCTCTGTTACCGAGGTAACCAGTAGGCATTCCCAGATACAGTGAAGGTCCTCACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCTGAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGAGAGTGGGAGGGGGAGCAGCATAAGCCAGGCCTCAAGGTAGAAGGACAACCAGGAGACAGCCTGGAAAAAGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAG-GGGAGGTGGGACAGGCTGCAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAGGTGGGGTGTTACCTACACCCT-------CGGGGCCAGATGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27576581 789 + 35968885 aaggttttgtgtggagagcatgtacatgcctttctgggaaaacagtccacagctcttattctcagcaggcttcactgtcaaaaaaggttagaacTCTTGCTACAGAGCTATGGAAGCAGCTAGGTGAGGGGCCTGCCAAGGGCATTCTGGGCACTACCTGGGCA--------------------CTCTCGAGCCCACCATCCCCTAGGCAGGCTGCACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAATCGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGCAGTGCATCTCCTGCAGCGTCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTGGCCCTTGCAGCAAGTGAAAAGCCTATTATTGACTCCCTCCCTACCCATGTAGACAGT-GAACCAA-GACACTCATATCAGGTAAATGCCTTGGTCTCTGTCACCGAGGTGACCAGTAGGCATTCCCAGATACAGTGAAGGTCCTCACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCTCAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGA-GGGGAGCAGCATGAGCCAGGCCTCGAGGCAGAAGGACAACCAGGAGACAGCCTGGAAAAAGTGCTGGACCTACAAGGGCTCAAGGCTGGCCAGAG-GGGAGGTGGGATATGCTGCAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAGGTGGGATGTTACCTACACCCT-------CGGGGACAGATGCA i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46826346 790 - 99891981 AAGGTTTTGCATGGAGAGCATGTACATGCCTTTCTGGGAAAACAGTCCACAGCTCTTATTCTCGGCAGGCTCCACAGTCAAAAAGGGTTAGAATTCTTGCTACAGAGCTGCGGGAGCGGCTAGGTGAGGGGCCTGCCAAGGGCATTCCGGAGACTACCTGGGCA--------------------CCCCTGAGCCCACTGTCCCCTAGGCAGGCTGCGCTGCTTGTTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGAACCGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGGGGTGCATCTCCTGCAGCGTCCTCCATCCCTAAAGCCATGGGGCCAAGAGAATTGGCCCTAGTAGCAAGTGAAAAGCCTATTACTGGCTCCCTCCTTGGCCATACAGACAGT-GAACCAC-GGTACTCGTATCAAGTAAATGCCTTGGTCTCTGTCACCGAGGTGACCAGTAGGCATTCCCAGGTACAGTGAAGGT-CTCACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTCAAGGCAGAAGGACAACCAGGAGACAACCTGGAAAATGTGCTGGACCCACAAGGGCTCAAGGCTGGCTAGAGAGGGAGGTGGGATAGGCTGGAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAGGTGGGGTGTTACCTACACCCT-------GGGGGCCAGATGCA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59843026 808 + 198365852 aaggttttgtgtggagagcatgcacatgtgtttctgggaaaatggtccacagctctcattctcagcaggctccaca--caaaaacggttagaacTCTTGCTACAGAGCTGTGGGAGCAGCTAGGTGAGGGGCCTGCCAAGGACACTCTGGGGACTACCTGGGCAGTCTTGAGCCCACCTGGGCAGTCCTGAGCCCACTGTCGCCTAGGCAGGCTGCGCTGCTTGGCATTTGCAGAGCTGAGGGGATGGGGCATGCAGGGACTGTGAAATCGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGTGAGGGGTGTGTATCCTGCGGCATCCTCCATCCCTAGGGCCATGGGGCCAGGAGAACTGGCCCTTGCAGCAAGTGAAAAGCCTATTATTGACTCCCTCCCTGGCCATGTAGACAGTGAACCAAA-GGCACTCATATCAAGTAAATGCCTTGGTCTCTGTGACCGAGGTGCCCAGTAGGCATTCCCAGGTGCAGGGAAGGTCCTGACACCAACATATGCACCTGGTCACCTGAGGAAAGAGAAAGGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTATGGGTCTTGGTGAGCAGGATGGGGAGGAGTATGAGCCAGGCCTCAGGGC---AGGACAACCAGGAGACGGCCTGGAAAAAGTGCTGGACCCACGAGGCTTTAAGGCTGGCCAGAGAGGGAGGCAGGATAGGCTGGAAAGTCCCGAGGTCTGAAGATTGGCCCTGGCAGGCAGAAACCAGGTAAGATGGGCAGTTACCTGCATCCTG------GGGGGCCAGATGCA i rheMac3.chr3 I 352 I 1 s macFas5.chr3 127724553 786 - 192294377 AAGGTTTTGCATGGAGAGCATGTACATGCCTTTCT-GGAAAACAGTCCACAG--CTTATTCTCAGCAGGCTCCACAGTCAAAAAAGGTTAGAACTCTTGCTACAGAGCTGTGGGAGCACCTAGGTGAGGGGCCTGCCAAGGGCATTCTAGGGACTACCTGGGCA----------------------CCCGAGCCCACTGTCCCCTAGGCAGGCTGTACTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCATGTGGGGACTGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGCGAGGGGTACATCTCCTGCAGCATCCTCCATCCCTA-GACCATGGGGCCAGGAGAACTGATCCTTTCAGCAAGTCAAAAGCCTATTACTGACTTCTTCCCTGGCCATGTAGACAGTTGAACCAG-GGCAGTCATATCAAGTAAATGTCTTGGTCTCTGTCACCGAGGTGACCAGTAGGCATTCCCAGGTGCAGTGAAGGTCCTGACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAAGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGATCCAGACCTTGAGGCAGAAGGACAACCAGGAGACAGCCTGGAAAATGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAGAGGGAGGTGGGATAGGCTGGAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGAAAGAAGCCAGGTAAGGTGGGGTGTTACCCGCACCCT-------GGGGGCCAAGTGCA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 64902 795 - 317753 AAGGTTTTGTGTGGACAGCGTGTACATGCCTTTCTGGGAAAACAGTCCACAGCTCCTATTCTCAGCAGGCTCCAGT--CAAAAAAGGTTAGAACTCTTGCTACAGAGCTGTGAGAGCAGCTAGGTGAGGGGCCTGGCAAGGGCACTCTGGGGACAACCTGGGTA--------------------TTCCTGAGCCCACTGTCCCCTAGGCAGGCTGCGCTGCTTGGTATTTGCAGAGCTG-GGGGGTCGGGCACGTGGGGACTGAGAAATTGCCCTGAGATGACCCACAGTTCTCaggtgggaagggaggggtgTGTCTTCTGCAGCATCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTGGTCCTTGCAGCAAGTCAAAAGTCTATTATTGACTCCCTCCCTGGCCATGTAGACAGT-GAACCAG-GGCACTCATATCAAGTAAATGCCTTGGTCCCTGTCACCGAGGTGACCAGTAGGCATTCCCAGGTGCAGTGAAGGTCCTCACACCAAGATATGCACCTGGTCacctgaggaaagagaaaggactaTCCGAGGGGATGGGGCAGAGCTGGGTGTGGAGTGGACCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGAGCCAGGCCTTGAGGCAGAAGGACAACCAGGAGACAGCCTGGAAAAAGTGCTGGACCCACAAGGGCTCAAGGCTGGCCAGAGGGGGAGGTGGGATAGCCTGTAAAGTCTTGAGGTCTTAAGATTGGCCCTGGCAGGAAGAAACCAGGTAAGGTGGGGTGTTACCTCTACCCTGTACCCTGGGGGCCAGGTGCA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124179393 787 - 127223203 AAGGTTTTGCATGGACAGCATGTACATGCCTTTCT-GGAAAACAGTCCACAG--CTTATTCTCAGCAGGCTCCACAGTCAAAAAAGGTTAGAACTCTTGCTACAGAGCTGTGGGAGCACCTAGGTGAGGAGCCTGCCAAGGGCATTCTGGGGACTACCTGGGCA--------------------CCCCTGAGCCCACTGTCCCCTAGGCAGGCTGCGCTGCTTGGTATTTGCAGAGCTGAGGGGGTGGGGCACGTGGGGACTGTGAAATTGCCCTGAGATGACCCACAGTCCTCAGCTGGGAAGGGAGGGGTGCATCTCCTGCAGCATCCTCCATCCCTA-GACCANGGGGCCAGGAGAACTGATCCTTTCAGCAAGTCAAAAGCCTATTACTGACTTCTTCCCTGGCCATGTAGACAGT-GAACCAG-GGCAGTCATATCAAGTAAATGCCTTGGTCTCTGTCACCGAGGTGACCAGTAGGCATTCTCAGGTGCAGTGAAGGTCCTGACACCAAGATATGCACCTGGCCACCTGAGGAAAGAGAAAGGACTATCCAAGGGGATGGGGCTGAGCTGGGTGTGGAGTGGTCCTTGTGGGTCTTGGTGAGTGGGAGGGGGAGCAGCATGAGCCAGACCTTGAGGCAGAAGGACAACCAGGAGAGAGCCTGGAAAATGTGCTGGAGCCACAAGGGCTCAAGGCTGGCCAGAGAGGGAGGTGGGATAGGCTGGAAAGTCCTGAGGTCTGAAGATTGGCCCTGGCAGAAAGAAGCCAGGTAAGGTGGGGTGTTACCTGCACCCT-------GGGGGCCAAGTGCA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1464425 789 + 204313951 aaggttttgtgtgaagagtgtgcacatgcatttctgggaaaatggtccacagctctcatttttgtcaggctccatattcaaaaaaggttagaacTCTTGCTACAGAGCTGTGGAAGCAGCTAGGTGAGGGACCTGCCAAGGGTGCTCTGGGGACTAGCTGGACA--------------------CTCCTGAGCCCACTGTCCCCTAGGTAGGCTGTGCTGCTTGGTATTTGCAGAGGTAACAGGGTGGGGCGTGCAGGGACTGTGAAATTGCCCTGAGATGACTCACAGGCCTCAGCTGGGACGTGAGGCGTACAT---CTGCAGCATCCTCCATCCCTAGAGCCATGGGGCCAGGAGAACTAGCCCTTGCAGTAAGTGAAAAGCCTATTATTGACTCCCTCCCTGGCCATGCAGACAGT-GAACCAAGGGCACTCATATCAAGTAAATGTCTTGGTCTCTGTGACCGAGGTGACCAGTAGGCATTCCCAGGTGCAGGGAACCTCCTGACACTAAGTTATGCACCTGGTCACCTGAGGAAAGAGAAAGGACTATCCGAGGGGATGGGGCTGAGCTGGGTGTGGAGTAGTCCTTGTGGGTCTCGGTGAGTGGGAGGGGGAGCAGCATGACCCAGGCCTCGTGGCAAAAGGACAACCAGGAGACAGTCTGGAAAAAGTGCTGAACCCATGAGGGTTCAAGGCTGGCCAGAGAGGAAGGTGGGGTCGACTGGGAAGTTCCAAGGTCTGAAGATGGGCCCTGGAAGGCAGAAACCAGTTACGGTGGGCAGTCACCCGCACCCT-------GGGGGCCAGATGCA i calJac3.chr2 C 0 I 1 a score=160149.000000 s hg38.chr17_GL383563v3_alt 45036 115 + 375691 GGCCAGAGCCCGCCAATTACCAGGCCCTTAGGGAGGTGTGAGCCCCTTGAAATGATGCAAG-------------GttttttgtttttgttttggagacggagtttcgctcttgtcacacaggctggCA s panTro4.chr4 121866938 115 + 193495092 GGCCAGAGCCAGCCAATTACCAGGCCCTTAGGGAGGTGTGAGCCCCTTGAAATGATGCAAG-------------GttttttgtttttgttttggagacagagtttcgctcttgtcgcacaggctggCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27577370 111 + 35968885 GGCCAGAGCCAGCCAATTACCAGGCCCTTAGGGAGGTGTGAGCCCCTTGAAATGATGCAAG-------------Gttttttgttttcgttttggagacggagtttcgctcttgtcgcacaggct---- i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46827136 110 - 99891981 GACCAGATCAGGCCAATTACCGGGCCCTTAGGGAGGTGTGAGCCCCCTGAAGTGATGGAAG-------------GGttttttt-----ttttggagacagagctttgctcttgtcgcacaggctggCA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127725339 112 - 192294377 GGCCAGATCAGGCCAACTACCGGGCCCTTAGAGAAATGTGAGCCCCTTGAAATAGTGGAAG-------------ttttttttttt---tttttgagacggagtttcgctcttctcgcacaggctggCA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 65697 125 - 317753 GGCCAGAGCAGGCCAATTACCAGGCCCTTAGGGAGGTGTGAGCCCCCTGAAATGATgcaaggtgtttttgttttgttttgttttg---tttttgaagcagagtttcgctcttgtcataCAGGTTGGCA i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124180180 109 - 127223203 GGCCAGATCAGGCCAATTACCAGGCCCTTAGGGAGATGTGAGCCCCTTGAAATGGTGGAAG-------------Gtt---ttttt---tttttgagacggaatttcactcctcttgcacaggctggCA i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1465214 1 + 204313951 I e rheMac3.chr3 59843834 1 + 198365852 I a score=2968663.000000 s hg38.chr17_GL383563v3_alt 45151 1085 + 375691 CCTTTGCCCAGAGCAGGCACCAAGACTTCTGGCTCTGGGTGT-GACCTCAGTCTGGGTAAAAGCCCCAGCCCCCACCAGCACCACCTACCCCCTAGACTACTTCAGGTGCTGAGCCCAAGCCAGGGGCAGGAAGCTAAACTGATGCCTAGGGTAATCCCAACAAAGTCCCTGGTTCCCCGC-AGCTATGGGGCTGACGGGGAATTACAGCCCAAA-CCCCAGATGCTGGCTCTCAAACTAACACTGAGCCCTCAGTGCCCAcagggagatacaatcagcgcactttccagatggggaaatgggatcagagaagtgcaacagccttgcccaatgccccagaccagGGCTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTTCAGAGGGCAGCAGCTGCTGTGATGTACCCACCTGAGCCTGGCAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCTGGCATGAGGCGTGCCCAGAGGGACAGAGGCAGATGAGTttcgtctcctccactggattgtgagggcctagaaggAGACAAGGGTCTGCTTGAGAA-------------------------GGCAGTGAACAGCGAGCAGCCTGAGGCAGTGCCCCTCTGGATGGATGCGCAGTGCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTGAGGCATGGAGAGTTcacagctaccaagtgtaggagtctggattcaaagccaacggcgtgactccaaagtccctgccctagcccctgga------------------ccaccctTGCAGGCCCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAAGACCAGGGAAACTTGGGGAGCCTCAGAGCA-CCCCCAGGTATTCCAACCTAACCCTGGTGCCCC-GCCTCTCACCACCCTTCTTCCTGCTTTAACCTCAACCCCTACACAAAGCCTGGGCCACTTCATGTGGCATCAAACAGACGCCTCAATAAATC---AGTCTAATCTCG-------------AAAAAAAAAAGACTTAACAGATATACAATTGCACGTTAGAATGCTAAAGACCATAAACATAGAACAACTTAAAGTACATATAAATTCAATATATATCCAATCATTGTAAC s panTro4.chr4 121867053 1087 + 193495092 CCTTTGCCCAGAGCAGGCACCAAGACTTCCGGCTCTGGGTGT-GACCTCAGTCTCGGTAAAAGCCCCAGCCCCCACCAGGACCACCTACCCCCTAGACTACTTCAGGTGCTGAGCCCAAGCCAGGGGCAGGAAGCTAAACTGATGCCTAGGGTAATCCCAACAAAGTCCCTGGTTCCCCGC-AGCTATGGGGCTGACGGGGAATTACAGCCCAAA-CCCCAGATGCTGGCTCTCAAACTAACACTGAGCCCTCAGTGCCCACAGGGAGATACAATCAGCGCACTTTCCAGATGGGGAAATGGGATCAGAGAAGTGCAACAGCCTTGCCCAATGCCCCAGACCAGGGCTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTTCAGAGGGCAGCAGCTGCTGTGATGTACCCACCTGAGCCTGGCAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCTGGCATGAGGCGTGCCCAGAGGGACAGAGGCAGATGAGTTTCGTCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGGTCTGCTTGAGAA-------------------------GGCAGTGAATAGTGAGCAACCTGAGGCAGTGCCCCTCTGGATGGATCCGCAGTGCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTGAGGCATGGAGAGTTcacagctaccaagtgtaggagtctggattcaaagccaacggcgtgactccaaagtccctgccctagcccctgga------------------ccaccctTGCAGGCCCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAAGACCAGGGAAACTTGGGGAGCCTCAGAGCA-CCCCCAGGTATTCCAACCTAATCCTGGTACCCC-GCCTCTCACCACCCTTCTTCCTGCTTTAACCTCAACCCCTACACAAAGCCTGGGCCACTTAATGTGGCATCAAACAGATGCCTCAATAAATC---AGTCTAATCTTG-----------AAAAAAAAAAAAGACTTAACAGATATACAATTGCACATTAGAATGCTAAAGACCATAAACATATAACAACTTAAAGTACATATAAATTCAATATATATCCAATCATTTTAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27577481 1078 + 35968885 ---------------ggcaccaagatttctggCTCTGGGTGT-GACCTCAGTCTGGGGAAAAGCCCCAGCCCCCACCAGGACCACCTACCCCCTAGACTACTTCAGGTGCTGAGCCCAAGCCAGGGGCAGGAAGCTAGACTGATACCTCAGGTAATCCCAACAAAGTCCCTGGTTCCCCAC-AGCTATGGGGCTGACAGGGAATTACAGCCCAAA-CCCCAGATGCTGGCTCTCAAACTAACACGAGGCCCTCAGTGCCCACAGGGAGATAcaatcagcgcactttccagatggggaaatgggctcagagaagtgcaacagccttgcccaatgccccaGACCAGGACTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTGTGATGTACCCACCTGAGCCTGGCAGCCTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCTGGCATGAGGCGTGCCCAGAGGGTCAGAGGCAGATGAGTTTCATCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGGTCTGCTTGAGAA-------------------------GGCAGTGAATAGTGAGCAACCTGAGGCAGTGCCCCTCTGGATGGATCCGCAGTTCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTGAGGCATGGAGAGTTcacagctaccaagtgtaggagtctggattcaaagccaacagcgtgactccaaagtccctgccctagcccctgga------------------ccaccctTGCAGGCCCATCAGATGCCCAGGCCAGCAGCACAG-CTGGCCAAGACCAGGGAAACTTGGGGAGCCTCAGAGCA-CCCCCAGGTATTCCAACCTAATCCTGGTACCCCTGCCTCTCACCACACTTCTTCCTGCTTTAACCTCAACCCCTACACAAAGCCTGGGCCACTTAATGTGGCATCAAACAGATGCCTCAATAAATC---AGTCTAATCTTG------AAAAAAAAAAAAAAAAGGACTTAACAGATATACAATTACACATTAGAATGCTAAAGACCATAAATATATAACAACTTAAAGTACATATAAATTCAATATATATCCAATCATTGTGAC i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46827246 1115 - 99891981 CCTTGGCCCAGAGCAGGCACCAAGATTTCTGGCTCTGGGTGTGGACCTCAGTGTGGGGAAAAGCCCCAACCCCCACCAGGACCACCTGCCCCCTAGACTGCTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTAGACTGATGCCTAGGGT-ATCCCGACAAAGTCCCTGGTTCCCCCC-AGCTATGGGGCTGAAGGGGAATTACAGCCCAAA-CCCCAGATACTGGCTCTCAAACTAACACTGAACCCTTAGTGCCCAcagggagatacaatcagcgcactttccagatggggaaatgggctcagagaagtgcaacagccttgcccaatgccccaGACCAGGGCTCCAGGCCCAGAGTGTTCTTTTATCACTGTGTCCAGAGGGCAGCAGCTGCTGTGATGTACCCACTTGAGCCTGGCAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCCTGTCCACAGATGCACCCGGCATGAGATGCGCCCAGAGGGACAGAGGCAGATGAGTTTCGTCTCCTCCACTGGGTTGTGAGGGCCTAGAAGGAGACAAGGGTCTGCCTGAGAA-------------------------GGCAGTGAATAGTGAGCAACCTGGGGCGGTTTCCATCTGGATGGATCCGCAGTACCTGGATGGAACCCTGCTCAGACAGAGCTCAGTTCTGCAAGTC-CCTGAGGCATGGAGaggtcacagttaccaagcgtaggagtctggattcaaagccaacagcgtgactccaaagtccctgccctatcccctggatcactcacctctcGGGAGCCACCCTTGCAGGGTCATCAGATGCCCAGGCCAGCAGCACAG-CCAGCCAGGACCAAGGAAACTTGGGGAGCCTCAGAGCA--CCCCAGGTATTCCAACCTAATCCTGGCATACCTGCCTTTCACTACCCTTCTTCCTGCTTTCACCTCACCCCCTACACAGAGCCTGGGCCACCTAATGTGGCATCAAACAGATGCCTCAATAAATC---AGTCTAATTTTCGTGGaaaaaaaaaaaaaaacaaaaaaaaaaCAGATATACAGCTGCAAGTTATAATGCTAAAGAACATAAACATATAACAACTTAAAGTACATATAAA-TCAATAGATATCCAATCACTGTGAC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59843835 1111 + 198365852 CCTTAGCCCAGAGCAGGCGCCAAGATTTCTGGCTCTGGGTGT-GACTTCAGTCTGGGGAAAAGCCCCAACCCCCACCAGGACCACCTGCCCCCCAGAGTACTTCAGATGCTAAGCCCAAG-CAGGGGCAGGAAGCTGGACTGATGCCTGGGGT-ATCCCAACAAAGTCCCT-GCTACCCCCAAGCTATGGGGCTAAAGGGGGATTACAGCCCAAA-CCCCACATGCTGGCTCTCAAACTAACACTGAGCCCTCAGTGCCCAAAGGGAGAttcaatcagcacactttccagatgggaaaatgacctcagagaagtggaagagccttgcccaatgccccagaccagggctcta-gcccagagtgttcttttgtcactgtgtccagAGGGCAGCAGCTACTCTGATGTACCCACCTAAGCCTGGCAACTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCTGTGTCCACAGATGCACCTGGCATGAGGCGTACCCAGAGAGACAGAGGCAGATGAGTTTCGCTTTCTCCACTGGATTGTGACGGCCTCCAAGGAGACAAAGATCTGCTTATGAA-------------------------GGCAGCGGACAGTGAGCAACTGGGGGTGGTTTAACTCTAGATGGATCTGCAGTGCCTGGATGGGATCTGTCTCAGACAGAGCTCAGTTCTGCAGGTCACTTCAGGCACGGAaaggtcacagctaccaagtgtaggagtctggattcaaagccaacagcatgactccaaagtccctgccctagcccctggaccacccacctctc-AGAGTCACCCTTGCAAGCTCATCAGATGCTCAGGCCAGCAGCACAG-CTGGCCAGGGCAAGGGAAACTTGGGGAACCTCAGAGGA-CCCCTAGGTATTCCAACCTAATCCTGGCACCACTGCCCCTCACCATCCTTCTTCCTGCGTTAACCTTACCCCCTACACAGAGCCTGGGCCACTTAACTTGGCATCAAACAGATGCCTCAATAAATC-AGAGTCTGATCTTCTT-----GAAAAAAAAAAAAAAAGACTTAACAGATACACAGTTGCAAGTTAGAATACTAAAGAACATAAACATACAACAACTTAATGAACATATAAATTCAATATATAGCCAATCATTGTAAC i rheMac3.chr3 I 1 C 0 s macFas5.chr3 127725451 1086 - 192294377 CCTTTGCCCAGAGCAGGCACCAACATTTCTGGCTCTGGGTGT-GACCTCAGAGTGGGGAAAATCCCCAACCCCCACCAGGACCACCTGCCGCCTAGACTACTTCAGATGCTGAGCCCAAGACAGGGGCAGGAAGCTAGAATGACACCTAGGTTAATCCTGACAAAGTCCCTGGCTACCCCC-AGCTACAGGGCTGAAGGGGAATTACAGCCCAAA-CCCCGGAAGCTGACTCT----CTAACACTGAGCCCTCAGTGCCCACAGGGAGATAGAATCAGCACACTATCCAGATGGGGAAATGGGCTCCGAGAAGTGCAAGAGCCTTGCCCGATGCCCCAGACCAGGGCTCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTAATGTACCTACCTGAGCCTGGCAACCTTCTCCAACTTCGGAAGCCCAGGAGCATGGCCCATGTCCACTGATGCACTTGGCATGAGACGCGACCAGAGGGATGGAGGCAGATGAGTTTCACCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGCTCTGCTTGAGAA-------------------------GACAGTGGATA--------------GTGGTTTCCCTCTGGATGGATCTCCAGTGCCTGGATGGGACCTGGCTCAGACAGAGCACAGTTCTGCAGGTC-CCTGAGGCACGGAGAGTTcacagctactaagtgtaggagtctaaattcaaagccaatagcgtgactccaaagtccctgccctagcccctggaccacccacctctcGGGATTCACCCTTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCAGCCAGGACCAGGGAAACTTGAGAAGCCTCAGAGCA-CCCCCAAGTATTCCAATCTAATCCTGGCACCCCTGCCTCTCACCACCCttcttcctgttttaacctcaccgcctacacagagcctgggccactt------------aacagatgcctcaataaatCAAGAGTCTAATCTTCTT----GGGGGGAAAAAAAAAAAGACTTGACAGATATATAGTTGCAAGTCAGAATGCTAAAGAATATAAACATATAACAAGTTAATGTACGTATAAATTCAATATACATCCAATCATTGTGAC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 65822 1113 - 317753 CCTTTGCCCAGAGCAGGTACCATGATTTCTGGCTCTGGGTGT-GACCTCAGTCTGGGGAAAAGCCCCAATCCTCACCAGGACCATCTGCCACCTAGACTACTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTGGCCTGATGCTTGGGGT-ATCCCGACAAAGTCCCTGGTTCCCCCC-AGCTATGGGGCTGAAGGGGAATTATAGCCCAAA-CCCCAGATGCTGGTTCTCAAACTAACACTGAGCCCTCAGTGCCCACAGGGAGATAGAATCAGCACACTTTCCAGATGGGGAAATGG-CTCAGAGAAGTGCAAGAGCCTTGCCCAATGCCCCAGACCAGGGCTCCAGGCCCAGAGTGTTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTGATGTACCCACCTGAGCCTGACAGCTTTCTCCAACTTTGGAAGCCCAGGAGCATGGCCCAGGTCCACAGATGCACCTGGCATGAGGTGCGCCCAGAGGGACAGAGGCAGATGAGTTTCGTCTCCTCCACTGGAATGTGAGGGCCTAGAAGGAGACAAGGGTCTGCTTGAGAA-------------------------GGCACTGAATAGTGAGCAACTTGGGGCGGTTTCCCTCTGGATGGATCTGCAGTGCCTGGATGGAACCTGGCTCAGACAGAGCTCAGTTCTGCAGGTC-CCTGAGGCATGGAGAGTTCACAGCTACCAAGTGTAGGAGTCTGGATTCAAAGCCAACAGCGTGACTCCAAAGTCCCTGCCCTAGCCCCTGGACCACTCACTTCTTGGGAGTCACCCTTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAGGACCAGGGAAACTTGGGGAGCCTCAGAGAA-CCCCCAGGTATTCCAATCTAATCCTGGCACCCCTGCCCCTCACTACCCTTCTTCCTGCTTTAACCTCAACCCCTACACAGAGCCCGGGCCACTTAACACGACATCAAACAGATGCCTCAATAAATC-AGAGTCTAAtcttctt----gagaaaaaaaaaaaaaatacttcacatATATATAATTGCAAGTTAGAATGCTAAAGAACATAAACATATAACAACTTAAAGTACACATAAATTCAATATATATTCAATCATTTTGAC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124180289 1083 - 127223203 CCTTTGCCCAGAGCAGGCACCAACATTTCTGGCTCTGGGTGT-GACCTCAGAGTGGGGAAAAGCCCCAACCCCCACCAGGACCACCTGCCGCCTAGACTACTTCAGATGCTGAGCCCAAGCCAGGGGCAGGAAGCTAGAATGACACCTAGGTTAATCCTGACAAAGTCCCTGGCTCCCCCC-AGCTATGGGGCTGAAGGGGAATTACAGCCCAAA-CCCCAGATGCTGACTCT----CTAACACTGAGCCCTCAGTGCCCACAGGGAGATAGAATCAGCACACTATCCAGATGGGGAAATGGGCTCCAAGAAGTGCAAGAGCCTTGCCCGATGCCCCAGACCAGGGCTCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCAGAGGGCAGCAGCTGCTCTGAGGTACCCACCTGAGCCTGGCAGCTTTCTCCAACTTCGGAAGCCCAGGAGCATGGCCCATGTCCACTGATGCACCTGGCATGAGCCGCGACCAGAGGGACGGAGGCAGATGAGTTTCACCTCCTCCACTGGATTGTGAGGGCCTAGAAGGAGACAAGGCTCTGCTTGAGAA-------------------------GACAGTAGATA--------------GTGGTTTCCCTCTGGATGGATCTCCAATGCCTGGATGGGACCTGGCTCAGACAGAGCACAGTTCTGCAGGTC-CCTGAGGCACGGAGAGTTcacagctactaagtgtaggagtctaaattcaaagacaacagcgtgactccaaagtccctgccctagcccctggaccacccacctctTGGGATTCACCCTTGCAGGCTCATCAGATGCCCAGGCCAGCAGCACAG-CCGGCCAGGACCAAGGAAACTTGGGAAGCCTCAGAGTA-CCGCCAGGTATTCCAACCTAAACCTGGCACC-CTGCCTCTCACCACCCttcttcctgttttaacctcaccgcctacacag-gcctgggccactt------------aacagatgcctcaataaatCAAGAGTCTAATCTTCTT-----GGGGGAAAAAAAAAAAGACTTAACAGATATATAGTTGCAAGTCAGAATGCTAAAGAATATAAACATATAACAAGTTAATGTACATATAAGTTCAATATACATCCAATCATTGTGAC i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1465215 1117 + 204313951 CCTTAGCCCAGAGCAAACACCAAGATTTCTGGCACTGGGTGT-GACCTCAGTTTGGGGAGAAGCCCCAAGCCCCACCAGGACCACCTGCCCCTCAGACTACTTCAGATAATGAGCCGAAGCCAGGGGCAGGAAGCTAGACTGATGCCTACGGCGATCCCAACAAAGTCCCTGGTTCTCCCC-AGCTATGGGGCTGAAGGGGAATTACAGCCCAAACCCCCAGATGCTGGCTCTGAAACTAACCCTGAGCTCTCAGTGCCCGTAGGGAGATACAATCAGCACGCTTTCCAGATAGAGAAATGGGCTCAGAGAAGTGCAAGAGCCTTAACCCATTCCCCAGACCAGGG-TCCAGGCCCAGAGTATTCTTTTGTCACTGTGTCCACAGGGCAGCAGGTGCTCTGATGTATCCATCTGAGCCTGGTGACTTTCTCCAACTTTGGAAGCCCAGGAGCATGACCCATGTCCACAGATGTACCTGGCATGAAGCACGCCCA--------GAGGCAGATGAGTtttgcctcctccactggattgtgagagcctcgaaggggacaaggatcTGCATGAGAAAGCCCTTGAGACATCCCACAAAGCTGGCAGCAGACAGTGAGCAATCTGGGACAGTTTCCCTCTGGATGGATCCACAGTGCCTGGATGGGACCTGGCTCAGACAGAGGTCAGTTCTGCaggtc-actgaggcatggagaggtcacagctaccaagtgtaggaatctgtattcaaggcccacagcatgactccaaagt------------ccctggaccactTACCTCTCAGAA-TCACCCTTGCAAGCTCATCAGATGCCCAGGCCAGCAACACAGACAAGCCAGGGCCAAAGAAATGTGGGAAGCCTTGGAACACCCCCCACGTATTCCAACTTAATCCTGGCACCCTTGCGCCTCGCCACCCTTCTTCCTGCTTCAACCTCACCCCCTACACAGAGCCTGGTCCActtaagttggcatcaattagatgccttgataaatc---agtctgatcttctt------gaggaaaaaaaaaaagactttaCAGATACACAGTTGCAAGTCAGAATGCTAAAGAACATAAACATATAACAACCTAATGTACATATACATTCATTATATAACCAATCATTGTGAC i calJac3.chr2 I 1 I 315 a score=48097.000000 s hg38.chr17_GL383563v3_alt 46236 20 + 375691 TATGACACAGTAGAATATTA s panTro4.chr4 121868140 20 + 193495092 TATGACACAGTAGAATATTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27578559 20 + 35968885 TATGACACAGTAGAATATTA i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46828361 20 - 99891981 TATGACCCAGTAGAATATTA i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59844946 20 + 198365852 TATGACATAATAGAATATTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127726537 20 - 192294377 TATGACACAGTAGAATATTA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 66935 20 - 317753 TATGACACGGtagaatatta i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124181372 20 - 127223203 TATGACACAGTAGAATATTA i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1466332 315 + 204313951 I a score=1816504.000000 s hg38.chr17_GL383563v3_alt 46256 684 + 375691 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATGTATTCAAACTATTTATTCAAAATACAAATCATCAACATACATTGCCACTAA-----TATT-----CAGTCCCTTCACAGGACAT--GATTCACTGGGAGTTAATAAATTAGCAGCCAGCAGGCAGTGACACACCGCAAAAATGAAAACCAAGAGGTGAAATAGTTCTGAAATA---AAGGTTTTAAAGCTAACAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATATGAGATGATACAATGTCCTATACTTTGGTAAATACAGACTATGTTTA-AACAATGTCTGTAACGTGACTTGTAAAATGCTCCTGGCTTTACAAAGATGTGATTAAGATGTAG-TAACACATGCTAAACCATTTCCCCCTGCA---GAGCATGTGGTAACTTTCATCAGTCACACTGAGAGTCCAGAAGATAAAGGAAAAGGTCATGGATTTCGCTGAGAACTTACCAGAGTTGAACTCCCTCATTTTCCGTTCCCCAGCATTGGCGGGTTCTGGGACTGGTGGCTGTGGTGGCTCGTTGGTCTTT-GTCTCTTAGAAGGTGGGGAATAATCATCATCTTGAAAAAG--AAAAAATGGTCATTACTGAAGGAACCATCTTA-G-GTTACAGCCACCTCTGGGTCAATTCCCAACATT s panTro4.chr4 121868160 680 + 193495092 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATGTATTCAAACTACTTATTCAAAATACAAATCATCAACATAAATTGCCACTAA-----TATT-----CAGTCCCTTCACAGGACAC--GATTCACTGGGAGTTAATAAATTAGCAGCCGGCAGGCAGTGACACACAGCAAAAATGAAAACCACGAGGTGAAATAGTTCTGAAATA---AAGGTTTTAAAGCTAACAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAAC----TAATATGAGATGATACAACGTCCTATACTTTGGTAAATACAGACTATGTTTA-AACAATGTCTGTAACGTGACTTGTAAAATGCTCCTGGCTTTACAAAGATGTGATTAAGATGTAG-AAACACATGCTAAACCATTTCCCCCTGCA---GAGCATGTGGTAACTTTCATCAGTCACATTGAGAGTCCAGAAGATAAAGGAAATGGTCATGCATTTCGCTGAGAACTTACCAGAGTTGAACTCCCTCATTTTCCGTTCCCCAGCATTGGCGGGTTCTGGGACTGGTGGCTGTGGTGGCTCGTTGGTCTTT-GTCTCTTAGAAGGTGGGGAATAATCATCATCTTGAAAAAG--AAAAAATGGTCATTACTGAAGGAACCATCTTA-G-GTTACAGCCACCTCTGGGTCAATTCCCAACATT i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27578579 686 + 35968885 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATGTATTCAAACTATTTATTCAAAATACAAATCATCAACATAATTTGCCACTAA-----TATT-----CAGTCCCTTCACAGGACACATGATTCACTGGGAATTAATAAATTAGCAGCCGGCAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAATAGTTCTGAAATA---AAGGTTTTAAAGCTAACAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATATGAGATGATACAATGTCCTATACTTTGGTAAATACAGACTATGTTTA-AACAATGTCTGTAATGTGACTTTCAAAATGCTCCTGGCTTTACAAAGATGTCATTAAGATGTAG-TAATACATGCTAAACCATTTCCCCCTGCA---GAGCACATGGTAACTTTCATCAGTCACATTGAGAGTCCAGAAGATAAAGGAAAAGGTCGTGGATTTCGCTGAGAACTTACCAGAGTTGAACTCCCTCATTTTCCATTCCCCAGCATTGGCGGGTTCTGGGACTGGTGGCTGTGGTGGCTCGTTGGTCTTT-GTCTCTTAGAAGGTGGGGAATAATCATCATCTTGAAAAAG--CAAAAATGGTCATTACTGAAGGAACCATCTTA-G-GTTACAGCCACCTCTGGGTCAATTCCCAACATT i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46828381 685 - 99891981 AAATACTATTTTCAAAATGTATGCAAGCTTAATGTTCTATTTATTCAAAC----TATTCAAAATACAAATCATCAACATAATTTGCCACTAA-----TATCTCATGCAGTCCCTTCAGAGGACACATGATTCACTGGGAGTTAATAAATTAGCAGCTGGCAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAATAGTTCTGAAA-G---AAGATTTTAAAGCTAAGAGAAATTATTGAATTACTAAGTCATTACCACTAATTTTGAGCCAACTAAC----TAATATGAGATGATACAGTATCCTATGCTTTGGTAAATACAAACTATATTTA-AACACTGTCTGTAATGTGACTTTCAAAATGCTCCTGGCTTTACAAAGATGTGATTAAAATGTAG-TAATACATGCTAAAGCGTTTCCCCCTGCA---GAGCATGTTGTAACTTTCATCAGTCACATTGAGAGTTCAGAAGATGAAGAAAAAGGTTGTGGATTTCACTGAGAACTTACCAGAGTTGAACTCCCTCACTTTCTGTTCCCCAGCATTGGCGGGTTCCGGGACTGGTGGCTGTGGTGGCTCATTGGTCTTTGGTCTCTTAGAAGGTGGAGAATCATCATCATCTTGAAAAAG-AAAAAAATGGTCATTACTGAAGGAACCATCTTATA-GTTACAGCCACCTCCAGGTCAATTCCCAACATT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59844966 679 + 198365852 AAATACTATTTTCAACATGTATACAAGCTTAATGATCTATTTA-----------TATCCAAAATATGAATCATCAACATAATTTGCCACTAA-----TATT-----CAGTCCCTTCACAGGACACATGATCCACTAGGAGTTAACAGATTAGCAGCTGACAGGCAGTGACACACAGCAAAAACGAAAATGAAGAGATGAAATAGCTTTGAAATAAAGAAGGTTTTAAAGCTAAGAGAAACCATTGAATTATTAAGTCATTAGCACTAATTTTGAGTCAACTAACTAATTAATGTGAGATGAAACAATGTCCTATGCTTTGGTAAATTCGAACGATGTTTA-AACAATGTCTATAATGTGACTTTCAAAAAGCTCCTGGCTTTACAAAGGTGAGATTATAATGTAG-TAATA-ATGCTAAAGCATGTCCCCCTGCAGATGAGCATGTTGTAACTTTCATCAGTCACACTGACAGTCCAGAAGATGAAGGAAAAGGTCGTGGATTTCACTGAGAACTTACCAGAGTTGAACTCCCTCACTTTCTGTTGCCCAACATTGGCAGGTTCTGGAACTGGTGGCTGTGGTGGCTCGTTGGTCTTTGGTCTCTTAGAAGATGGAGAATCATCATCATCTTGAAAAAG----AAAATGGTCATTACTGAAGGAATCATCTTA-G-GTTACAGCCACCTCCTAGTCAATTCCCAACATT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127726557 685 - 192294377 AAATACTATTTT-AAAATTTTTACAAGCTTAATATTCTATTCATTCAAACTATTTATTTAAAATACAAATCATCAACATAATTTGCTACTAAAATCTCATG-----CAGTCCCTTCACAGGACACATGAACCACTGGGAGTTAATAAATTAGCAGCTGGTAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAATGGTTCTGAAATAAAGAAGGTTTTAAAGCTAAGAGAAATCATTGAATTACTAAGTCATTAGCACTAATTTTAAG----CCAACTAATTAATATGAGATAATACAATGTCCTATGCTTTGGTAAATTCAAACTATATTTA-AACACTGTCTGTAATGTGACTTTCAAAATGCTCCTGGCCTTACAAAGATGAGATTACAATGCAG-TAATACATGCTAAAGCGTTTCCCCCTGCA---AAGCATGTTGTAACTTTCATTAGTCACATTGAGAGTCCAGAAGATGAAGGAAAAGGTTGTAGATTTCGCTGAGAACTTACCAGAGTTGAACTCCTTCACTTTCCGTTGCCCAGCATTGGCGGGTTCCAAGAGTGGTGGCTATAGTGGCTCGTTGGTCTTTGGTCTCTTAGAAGGTGGAGAATCATCATCATCTTGAAAAAG----AAAATGGTCATTATTGAAGGAACCATTGTA-GAGTTACAGCCACCTCCTGGTCAA----CAACATT i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 66955 687 - 317753 aaatactattttcaaaatgtatacaaGCTTAATGTTCTATTTATTCAAATTGCTTACTCAAAATACAAATCATCAACATAATTTGCCTCTAA-----CATT-----CAGTCCCTTCACAGGACACATGATCCACTGGGAGTTAATAAATTAGCAGCTGGCAGGCAGTAACACAcagcaaaaatgaaaaccaagagGTGAAATAGttctgaaata---aaagttttaaagctAAGAGAAATCACTGAATTACTAAGTCATTAGCACTAATTTTGAGCCAACTAACTAATTAATATGAGATGATATAATGTCCTATGCTTTGGTAAATACAAACTATGTTTA-AACAATGTCTGTAACGTGACTTTCAAAATGCTCCTGGCTTTACAAAGATGTGATTAAAATGTAG-TAATACATGCTAAAACATTTCCCCCTGCA---GAGAATGTTGTAACTTTCATCAGTCACATTGACAGTccagaagatgaaggaaaaggTTGTGGATTTCACTGAGAACTTACCAGAGTTGAACTCCCTCACTTTCTGTTGCCCAGCATTGGCAGGTTACGGGGCTGGTGGCTGTGGTGTCTCATTGGTCTTTGGTCTCTTAGAAGGTGGGGAATAATcatcatcttgaaaaag--aaaaaatggtcatTACTGAAGGAACCATCTTA-G-GTTACAGCCACCTCCGGGTCAATTCCCAACATT i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124181392 684 - 127223203 AAATACTATTTT-AAAATTTTTACAAGCTTAATATTCTATTCATTCAAACTATTTATTTAAAATACAAATCATCAACATAATTTGCTACTAAAATCTCATG-----CAGTCCCTTCACAGGACACATGATCCACTGGGAGTTAATAAATTAGCAGCTGGTAGGCAGTGACACACAGCAAAAATGAAAACCAAGAGGTGAAATGCTTCTGAAATAAAGAAGGTTTTAAAGCTAAGAGAAATCATTGAATTACTAAGTCATTAGCACTAATTTTAAG----CCAACTAATTAATATGAGATAATACAATGTTCTATGCTTTGGTAAATTCAAACTATATTTA-AACACTGTCTGTAATGTGACTTTCAAAATGCTCCTGGCCTTACAAAGATGAGATTACAATGCAG-TAATACATGCTAAAGCGTTTCCCCCTGCA---GAGCATGTTGTAACTTTCATTAGTCACATTGAGAGTCCAGAAGATGAAGGAAAAGGTTGTAGATTTCGCTGAGAACTTACCAGAGTTGAACTCCTTCACTTTCCGTTGCCCAGCATTGGCGGGTTCCAAGAGTGGTGGCTATAGTGGCTCGTTGGT-TTTGGTCTCTTAGAAGGTGGAGAATCATCATCATCTTGAAAAAG----AAAATGGTCATTATTGAAGGAACCATCATA-GAGTTACAGCCACCTCCTGCTCAA----AAACATT i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1466647 664 + 204313951 AAATACTATTTTCAAAATGTATACAAGCTTAATGTTCTATT-------------TATTCAAAATACGAACCATCAACTTAATTTGCCAC-----------------TAGTCCCTTCACAAAACACATGATCCACTGGGAGTTAACGGATTAGCAACTGACAGGCAGTGACACACAGGAATAAGGAAAACCAAGAGGCGAAACCGTTCTGAAGTAAAGAAGGTTTTAACGCAAAGAGAAATCAGAGAATTACTAAGTGATTAGCACTAATTCTGACCCAACTAACTAATTAATATGAAATGATGCAATGTCCTATGCTTTGGTAAATTCAAGCTATATTTCTAACAATGTTTGTAACGTGACTTTCGAAATGCTCCTGGCTCTACAAAGATGAGATTATAATGTAGTTAATACAGGCTAAAGCATTTCCCCCTGCT---GAGCATGTTGTAACTTTCAACAGTCACATTGGGCGTCCAGAAGATGAAGGTAAAGGTTGTGG----------TAACTTACCGAAGTTGAATTTC-TCACCCTCCGTTGCCCAGTATTGGCAGGTTCTGGAACTGGTGGCTATGGTAGCTTGTTGGTCTTTGGTCTCTTAGAAGGTGGAGAACCATCATCATCTTGAAAAAAAAAAAAAATGGCCACTACTGAAGGAACCATCTTA-GAGTTACAGCTAGCTCCCAGTCAATTCCCAACATT i calJac3.chr2 I 315 C 0 a score=111076.000000 s hg38.chr17_GL383563v3_alt 46940 58 + 375691 CAAAAGCTGAGCAGGGCTTTAAAGCTATCT----TATTAATAATTATTTCTGTATTGCGAAC s panTro4.chr4 121868840 58 + 193495092 CAAAAGCTGAGCAGGGCTTTAAAGCTATCT----TATTAATAATTATTTCTGTATTGCGAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27579265 58 + 35968885 CAAAAGCTGAGCAGGGCTTTAAAGCTATCT----TATTAATAATTATTTCTGTATTGTGAAC i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46829066 62 - 99891981 CAAAAGCTGAGCAGGGCTGTAAAGCTATTTTGAGTATTAATAATTCTTTCTGTATTGTGAAC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59845645 60 + 198365852 CAAAAGGTAAGTGGC--TTTAAAACTATTTTGAGTATTAATAATTATTCCTGTATTATGATC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127727242 62 - 192294377 CAAAAGTTGAGTGGAGGTTTAAAGGTATTTTGAGTATTAATAATTATTTCTCTATTGTGACC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 67642 62 - 317753 CAAATGTTGAGCAGGGCTTTAAAGCTATTTTGagtattaataattatttctgtattgCGAAC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124182076 62 - 127223203 CAAAAGTTGAGTGGAGGTTTAAAGGTATTTTGAGTATTAATAATTATTTCTCTATTGTGACC i chlSab2.chr21 C 0 I 17 e calJac3.chr2 1467311 0 + 204313951 C a score=13053.000000 s hg38.chr17_GL383563v3_alt 46998 8 + 375691 TTCAGCAT s panTro4.chr4 121868898 8 + 193495092 TTCAGCAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27579323 8 + 35968885 TTCAGCAT i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46829128 8 - 99891981 TTCAGCAT i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59845705 8 + 198365852 ATTAGCAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127727304 8 - 192294377 TTCAGCAC i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 67704 8 - 317753 TTCAGCAT i papAnu2.JH684865 C 0 C 0 e calJac3.chr2 1467311 0 + 204313951 C e chlSab2.chr21 124182138 17 - 127223203 I a score=1098760.000000 s hg38.chr17_GL383563v3_alt 47006 504 + 375691 ATTTTTTTCTAGTTACATTTGAAATGTTTTTCTTTTGGGATGTGCTCAAGTGAGTACTGCTTTTTCCTCTGCCTTGCTTCATTACTTTTTAGTTTCCTTCATTTGAATCATCATTGTAAGTCTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTACGTTCTATCTTAAGGCTTTTGAGAAAAAACTTTCAATGAAGATAGCCGCCTAAAGTTATACAAATATAGAAGAAACGGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTCTACAAAATTCACGCGTA----AACAAGGGAAGCTGAGTAATTGTATGTTCAAATACTTTTAACAAGTGCAAAACATGTAGGCTTaaagaaatagagctggccaggcatggtggttcacgcctgtaattccaacagtttgggaggccgaggcaggcagataacttgaggtcaggaattcgagaccagcctggccaacagag----tgaaaccctctctctactaaaaata s panTro4.chr4 121868906 504 + 193495092 ACTTTTTTCTAGTTACATTTAAAATGTTATTCTTTTGGGATGTGCTCAAGTGAATACTGCTTTTTCCTCTGCCTTGCTTCATTACTTTTTAGTTTCCTTCATTTGAATCATCATTGTAAGTTTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTATGTTCTATCTTAAGGCTTTTGAGAAAAAACTTTCAATGAAGAGAGCCGCCTAAAGTTATACAAATATAGAAGAAACGGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTATACAAAATTCACGTGTA----AACAAGGGAAGCTGAGTAATTGTACGTTCAAATACTTTTAACAAGTGCAAAACACGTAGGCTTAAAGAAATAGAGCTggccaggcatggtggttcacgcctgtaattccaacagtttgggaggccgaggcaggcagataacttgaggtcaggaattcgagaccagcctggccaacagag----tgaaaccctctctctactaaaaata i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27579331 503 + 35968885 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCTCAAGTGAATACTGCTTTTTCGTCTGTCTTGCTTCATTACTTTTTAGTTTGTTTCATTTGAATCATCATTGTAAGTCTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTATGTTCTATTTTAAGGCTTTTGAGAAAAAACTTTCAATGAAGACAGCCACCTAAAGTTATACAAATATAGAAGAAACGGGATAAAATAAAACTTAGATTGGAAAAAATATTTAAGATTATTCAAGATTCAAGCGTA----AACAAGGGAAGCTGAGTAATTGTATGTTCAAATACTTTTAACAAGTG-AAAACATGTAGGCTTAAAGAAATAGAGGTggccaggcatggtggttcacacctgtaattccaacactttgggaggccgaggcaggcagataacttgaggtcaggaattcgagaccagcctggccaacatag----cgaaaccccctctctactaaaaata i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46829136 506 - 99891981 AC-TTTTTCTAGTTACATTTGAAATTTTATTCTTTTGGGATGTACTCAAGTGAATACTGCTTTTTCCTCTGTCTTGTTTTATTACATTTTACTTTGCTTCATTTGAATCATCATTATAAGTCTCCCCTTCTCCTCAAATAACTTTCAAATTGCTGCCAAGAACTATGTTCTATTTTAAGGCTTTTGAGAAAAAACTTTCAATGAAAATAGCCACCTAAAGTTATACAAATATAGAATAAACAGGATAAAATAAAGCTTAGATTGGAAAAAATATTTAAGATTATACAAAATTCAAGCACACATCAACAAGGGAAGCTGAGTAATTCTATGTTCAAATACTTTTAAC-AGTGCAAAATGTGGAGGCTTAAAGAAATAGGGCTggccaggcatggtggttcatgcctgtaattccaacactttgggaggccgaggcaggccaatcacttatggttaggaattcgagaccagccttgccaaaacag----tgaaaccccacctctactaaaaata i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59845713 512 + 198365852 ACCTTTTTCTAGTTGCATCTGAAATTTTATTTTTTTGGGATGTGCTCGAGTGAATACTGTTTTATCCTCTGTCTTGCTTCATTATTTTTTAGTTTGCTTCATTTGAATCATCATTACAAATCTCCCCTTGCCCTCAAATAACTCTGAAATTGCTGCCAAGAACTATATTCTATTTTAAGGCTTTTCAGAAAAAACTTTCAACAAAGACAGCCACCTAAAGTTATACAAATACAGAAGAAAGGGGATATAATAAAGCTTAGACTGGAAAAAATATTTAAGCTTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATAAGTGCAAAACGTATATGCTTAAAGAAATAGGGCTggccgggcgtgttggctcatgcctgtaattccaacactttgggaggccaaggcaggcagatcacttgaggtcaggaattcaagaccatcctggccaacatggtgaatgaaaccccatctctactaaaaata i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127727312 503 - 192294377 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGACGTGCTCAAGTGAATACTGCTTTTTCCTCCGTCTTGCTTCATTACTTTTGAGTTTGCTTCATTTGAGTCATCATTATAAATCTTCCCTTCTCCTCAAATAACTTTCAAATTGTTGCCAAGAACTGTATTCTATTTTAAGGCTTTTGAGAAAAATCTTTCAATGAAGACAGCCACCTAAAGCTATACGAATATAG----AAGGGGATAAAATAAAGCTTAGATTGGAAAAAA-ATTCAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATATGTGCAAAATGTGTAGGGTTAAAGAAATAGAGCTggccaggtatggtggctcacgcctgtaattccaacactttgggaggccaaggcaggcagagcacttgaggtcaggaattcgagaccagcctggcctacacgg----tgaaaccccatctctactaaaaata i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 67712 500 - 317753 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCTCAAGTGAATACTGCTTTTTCCTCTGTCTTGCTTCACTACTTTTTAGTTTGCTTCATTTGAATCATCATTGTAAGTCTCCCCTTCTCCTCAAATAGCTTTCAAATTGCTGCCAAGAACAATAATCTATTCTAAGGCTTTT--GAAAAAACTTTCAATGAAGATAGCCACCT--AGTTATACAAATACAGAAGAAACGGGATAAAATAAAGCTTagattggaaaaaatatttaagattataCAAAATTCAAG----CATCAACAAGGGAAGCTGGGTAATTGTATGTTCAAATACTTTTAACAAGTGCAAAATGTGTAGCCTTAAAGATATagggctggccaggcatggtggttcacgcctgtaattccaacactttgggaggccgaggtaggctgatcacttgaggtccggaattggagaccagccttgccaacatgg----tgaaaccccaactctactaaaaaca i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124182155 503 - 127223203 ACTTTTTTCTAGTTACATTTGAAATGTTATTCTTTTGGGATGTGCGCAAGTGAATACTGCTTTTTCCTCCGTCTTGCTTCATTACTTTTGAGTTTGCTTCATTTGAATCATCATTATAAATCTTCCCTTCTCCTCAAATAACTTTCAAATTGTTGCCAAGAACTGTATTCTATTTTAAGGCTTTTGAGAAAAATCTTTCAATGAAGACAGCCACCTAAAGCTATACGAATATAG----AAGGGGATAAAATAAAGCTTAGATTGGAAAAAA-ATTCAAGATTATACAAAATTCAAGCATACATAAACAAGGGAAGCTGGATAATTGTATGTTCAAATACTTTTAATATGTGCAAAATGTGTAGGCTTAAAGAAATAGAGCTggccaggtatggtggctcacgcctgtaattccaacactttgggaggccaaggcaggcagagcacgtgaggtcaggaattcgagaccagcctagcctacatgg----tgaaaccccatctctactaaaaata i chlSab2.chr21 I 17 C 0 e calJac3.chr2 1467311 0 + 204313951 C a score=748665.000000 s hg38.chr17_GL383563v3_alt 47510 295 + 375691 caaaaattaggccaggagtgatggctcatgcctgtgatcccagcactttgagaggccgaggcgggtagatcacctgaggtcaggagtttg-agaccagcctaaccaacatagggaaaccccgtctctactaaaactacaacattagccgggtgtggtggcacatgcctgtaatcccagctactcgggaggct------gaggcaggagaatcccttgaacccaaaaggcaaagattgtggtgagccgagattgtgccattgcactccagcctgggcaaaaacagcgaaactccgtctcaaaa s panTro4.chr4 121869410 292 + 193495092 caaaaattaggccaggagtgatggctcatgcctgtgatcccagcactttgagaggccgaggcgggtagatcacctgaggtcaggagtttg-agaccagcctgaccaacacagagaaaccccgtctctactaaaactacaacattagcagggtgtggtggcacatgcctgtaatcccagctactcaggaggct------gaggcaggagaatcccttgaacccgaaaggcaaagattgtggtgagccgagattctgccattgcactccagcctgggtaacaacaccgaaactccgtctc---a i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27579834 294 + 35968885 caaaaattaggccaggagcgatggctcatgcctgtgatcccagcactttgagaggctgaggcgggtagatcacctgaggtcaggagtttg-agaccaacctaaccaacatagagaaaccccgtctttactaaaaatacaacattagccgggtgtggtggcacatgcctgtaatcgcagctactcaggaggct------gaggcaggagaatcccttgaacccaaaaggcaaagattgtggtgagccgagattgtgccattgcactccagcctgggcaacaacagcgaaactccatctc-aaa i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46829642 301 - 99891981 caaaaattaggccaggagccgtggctcacacctgtaatcccagcactttgagaggccgaggcaggtagatcacccgaggtcaggagtttg-agaccagcctgaccaacataaagaaatcttgtctctactaaaaatacaacattagccgggtgtggtggtgcatgcctgtaatccctgctacttgggaggctgaggcagaggcagaagaatcacttgaacctgaaaggcaaaggttgtggtgagctgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccatctcaaaa i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59846225 294 + 198365852 caaaaattaggctgggcgtggtggctcacacctgtaattccagcactttgggaagctgaggtgggcggatcacctgaggtcgggagttca-agatcagcctgactaacatggagaaaccctctctctattaaaaatacaaaattagccaggtatggtggcacatgcatgtaatcccagctactcaggagact------gaggcaggagaatcacttgaacccaggagacggaggttgcagtaagccgagatgatgacattgtactctagcctgggcaacaagagc-aaactctgtctcaaaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 127727815 296 - 192294377 caaaaattaggctgggcgcggtggctcatgcctgtgatcccagcactttgggaggccaagaaggctagatcacctgaggtcgggagtttagagaccagcctgaccaaaatagagaaatcccgtctctactaaaaatacactattagccaggcgcggtggcgcatgcctgtaaacccagctactcagggcact------gaggcaggagaatcgcttgaacccaaaaggcaaaggttgcagtgagacgagatcgtgccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaa i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 68212 295 - 317753 caaaaattagggcaggagcggtggctcacgcctgtgatcctgggactttgagaggccaatgtgggtagatcacctcaggttgggagttcg-agaccagcctaaccaacatagagaaaccccatctctaccaaaaacacaacgttagctgggcgtggtggcacatgcctgtaatcacaactactcgggaggct------gaggcaggagaattgcttgaacccgaaaggcaaagattgtggtgagctgagattgtgccactacactccagcctaggcaacaaaagcgaaactccgtctcaaaa i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124182658 296 - 127223203 caaaaattaggttgggcgcggtggctcatgcctgtgatcccagcactttgggaggccaaggcggctagatcacctgaggtcgggagtttagagaccagcctgaccaaaacagagaaatcccgtctctactaaaaatacaatattagccaggcgcggtggcgcatgcctgtaaacccagctactcagggcact------gaggcaggagaatcgcttgaacccaaaaggcaaaggttgcagtgagacgagattgtgccattgcactccagcctgggcaacaagagtgaaactccgtctcaaaa i chlSab2.chr21 C 0 I 261 s calJac3.chr2 1467311 284 + 204313951 CATAAATTAggccaggcacagtggctcatgcctgtaatcccaaaattttgggaggctgaggcaggcagatcgcctgaggtcaggagtttg-agatcagcctgcctagcacagagaaaccccgtctctactaaaaatgcaaaattagcaggtcatggtgg----tgcccataatcccagctactcgggaggct------gacacaagacaatcccttgaacccaagaggtggagattgcagtgagccgagatcacataattgcactccagcctgg--aacaagagcaaaactccagct----- i calJac3.chr2 C 0 C 0 a score=6120.000000 s hg38.chr17_GL383563v3_alt 47805 7 + 375691 aaaaaaa s panTro4.chr4 121869702 7 + 193495092 aaaaaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27580128 7 + 35968885 aaaaaaa i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46829943 7 - 99891981 acaaaaa i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59846519 5 + 198365852 --acaaa i rheMac3.chr3 C 0 I 178 s macFas5.chr3 127728111 5 - 192294377 --gacaa i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 68507 5 - 317753 --aaaaa i papAnu2.JH684865 C 0 I 2 e calJac3.chr2 1467595 0 + 204313951 C e chlSab2.chr21 124182954 261 - 127223203 I a score=169471.000000 s hg38.chr17_GL383563v3_alt 47812 143 + 375691 aaaagaaaaaattagccaggcatgg------------------------------------------------------------------------------------tgaagttgcggtgagctgagactgcaccattgcactccagcctgggtagcagagcaagaccctgtctcaaaaa--------------------------------------------------------aaaaaaaaaaaaaaaaaaaaaagagagagagagaaagaaagaaag s panTro4.chr4 121869709 204 + 193495092 aaaagaaaaaattagccaggcgtggtggcgcatgcctgtaatcccagctacttgggaggctgag-----------g------caggagaatcgcttgaacccaggaggctgaagttgcggtgagccgagactgcaccattgcactccagcctgggtagcagagcaagaccctgtctc--------------------------------------------------------------aaaaaaaaaaaaaaaaaaagagagagagagagaaagaaagaaag i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27580135 194 + 35968885 aaaggaaaaaattagccaggcgtggtggcgcatgcctgtaatcccagctacttgggaggctgag-----------g------caggagaatcgcttgaacccaggaggctgaagttgcggtgagccgagactgcaccattgcactccagcctgggtaacagagcaagaccttgtctc--------------------------------------------------------------aaaaaaaaaaaaaaaa----------agagagagagaaaGGAAG i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46829950 262 - 99891981 gaaaacaaaaattagccaggcatggtg----aaacgtgtaatcccagctacttgggaggctggg-----------g------caggagaatcgcttgaacccatgaggctgaagttgcggtgagccgagattgtaccactgcacttcagcctgggtaacagagcaaaaccctgtaagaaagaaagagggagaaagagagagagacagaaagcgagagagagagagaaagagagagatgaaaggaagaaaggaagaaaacaaagaaagaaagaaagaaagaaag i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127728116 206 - 192294377 -----caaaaattagccaggagtggtggcaca----tgtaatcccagctacttggg-------aag----ctgagg------caggagaatcgcttgaaaccgggaggcagaagttgtggttagccgagatcacataactgtactcaagcctgggtaacagagcaagaccctgtctcaacaaaaaaga---------------------------------------------------aaagaaagaagaaaagaagaaagaaaaggaaggaaggaaggaag i macFas5.chr3 C 0 I 70 s papAnu2.JH684865 68514 192 - 317753 -aaaacaaatattagccgggtgtggtggcgcatgcctgtaatcccagctgcttagg-------aggctga----gg------caggagaatcgcttgaacccaggaggctgaagttgtggtgagccgagatcacaccattgcactccagcctgggtaacagagcaagaccctgt-------------------------------------------------------------------------aaaaaaagaaaaatgaaaagaaaagaaggaagaaag i papAnu2.JH684865 I 2 C 0 s calJac3.chr2 1467595 172 + 204313951 --gaaaaaaaattagccaggcgtggtg----gtgcctgtaatcccagctactcaggag-----------------gccgaggcaggagaattgcttg-atacgggaggcagaagttgcagtgagccaagatcacacgactgcactccagcctgggtaacagagcaaaatccagtct---------------------------------------------------------------------------------------aaaaaaaggaagcaagaaGT i calJac3.chr2 C 0 C 0 e chlSab2.chr21 124182954 261 - 127223203 I e rheMac3.chr3 59846524 178 + 198365852 I a score=155748.000000 s hg38.chr17_GL383563v3_alt 47955 52 + 375691 agGGCTACATTATTTATGAAACAGATACTGTTAACTCAGTCACCAGAAAGCC s panTro4.chr4 121869913 52 + 193495092 aaGGCTACATTATTTATGAAACAGATACTGTTAAGTCAGTCACCAGAAAGCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27580329 52 + 35968885 AGGGCTACATTATTTATGAAACAGATACTGTTAACTCAGTCACCAGAAAGCC i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46830212 52 - 99891981 aGGGCTAAATTATTTACGAAACAGATACTGTTGACTCAGTCACCAGACAGCC i nomLeu3.chr17 C 0 C 0 s rheMac3.chr3 59846702 52 + 198365852 AGGGCTATATTATTTATGAAACAGATACTGTTGACTCAGTTACCAGAAAGCC i rheMac3.chr3 I 178 N 0 s macFas5.chr3 127728392 52 - 192294377 AGGGATACATTATTTATGAAACAGATACTGTTGACTCAGTTACCAGAAAGCC i macFas5.chr3 I 70 C 0 s papAnu2.JH684865 68706 52 - 317753 atggttaCATTATTTATGAAACACATACTATTAACTCAGTCACCAGAAAGCC i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124183215 52 - 127223203 AGGGATACATTATTTATGAAACAGATACTGTTGACTCAGTTACCAGAAAGCC i chlSab2.chr21 I 261 C 0 s calJac3.chr2 1467767 52 + 204313951 AGGGCTACATTATTTATGAAACAGATACTGTTGACTCAGTCACCAGAAAGCC i calJac3.chr2 C 0 C 0 a score=1025165.000000 s hg38.chr17_GL383563v3_alt 48007 513 + 375691 TGTGTATAAATGAGCAGTGAGATATTCAAGCACAGCACACACACACTTCTCAGGACAGCTGTCGTGAGTGTTCCATGCTCGTTTCCTTCTGGATACATCAGCAACTCACTCTGCTATGATCCTGCAATACGTCTCATGTTAGAATTAGAGACATCTGggccaggcacagtggctgacgcctgtaatcctaacactttgggaagccgaggcaggcag-atcacctaaggtcaggagttcgagaccagcctggccaacatggtgaaatgctgtctctaccaaaaataca-aaaaattagctgggcatggtggcgcgcgcctgtaatcccagctactcgggagcctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgtgccactgcactccagcatgggggacggagcaaggctctgtcaaa---------------aaaaaaaaaaacagaaaaagaaaaagaaaAAAGAATTAGAGACATCTGGATCAAATCAGCTGCCAGTCTCGC------------ s panTro4.chr4 121869965 528 + 193495092 TGTGTATAAATGAGCAGTGAGATATTCAAGCACAGCACACACACACTTCTCAGGACAGCTGTCGTGAGAGTTCCATGCTCGTTTCCTTCTGGATACATCAGCAACTCACTCTGCTATGATCCTGCAATACATCTCATGTTAGAATTAGAGACATCTGggccaggcacagtggctgacgcctgtaatcctaacactttgggaagccgaggcaggcag-atcacctaaggtcaggagtttgagaccagcctggccaacatggtgaaatgctgtctctaccaaaaataca-aaaaattagctgggcatggtggcgcgggcctgtaatcccagctactcgggagcctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgtgccactgcactccagcatgggggacggagcaaggctctgtcaaaaacaaaaacaaaaacaaaaaaaaaaacagaaaaagaaaaagaaaaaaGAATTAGTGACATCTGGATCAAATCAGCTGCCAGTCTCGC------------ i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27580381 519 + 35968885 TGTGTATAAATGAGCAGTGAGATATTCAAGCACAGCATACACACACTTCTCAGGACAGCTGTCGTGAGAGTTCCATGCTCGTTTCCTTCTGGATACATCAGCAACTCACTCTGCTATGATCCTGCAATACATCTCATGTTAGAATTAGAGACATCTGggccaggcacagtggctgatgcctgtaatcctaacactttgggaagccgaggcaggcag-atcacctaaggtcaggagttcaagaccagcctggccaacatggtgatacgctgtctctaccaaaaataca-aaaaatcagctggacatggtggcgcgtgcctgtaatcccagctactcgggagcctgaggcagtagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgtgccactgcactccggcatgggtgacagagcaaggctctgtcaaa---------aaaaaaacacaaaaaaacagaaaaagaaaaAGAAAAAAGAATTAGAGACATCAGGATCAAATCAGCTGCCAGTCTCGC------------ i ponAbe2.chr1_random C 0 I 921 s nomLeu3.chr17 46830264 502 - 99891981 TGTGTATAAATGAGCAGTGAGATACTCAAGCATAGCGCACACACACTACTCAGGACAGCTGTCGTGAGAGTTCTATGCTCACTTCCTTCTGGATACACCAGCAACTCACTCTGCTATGATCCTGCAATACATCTCATGTTAAAATTAGAGACATCTGgaccaggcacagtggctcacgcctgtaatcccaacactttgggaggccgaggcaggtag-atcacctgaggtcaggagttcgagaccagcctggacaacatggtgaaacgctgtctgtatcgaaaatac--aaaaattagcctggcgtggtggcgcgtgcctataatcccagctactcggaagcctgaggcagaagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaagactctgtctcc-------------------------ccccaccaaaaaaaagaaaaaagaaTTAGAGACATCTGGATCAAATCAGCTGCCACTGTCAT------------ i nomLeu3.chr17 C 0 I 13 s macFas5.chr3 127728444 495 - 192294377 TGTGTATAAATGAGCAGTGAGGTATTCAAGCACGGCACACACACACTACTCAGGGCAGCTGTTGTGAGAGTTCCATGCTCATTTCCTTGTGGATATACCAGCAACTCACTCTGCTATGATCCTGCAATACATTTCACGTTAGCATTAGAGACATCTGggccaggtgcgatggctcacacctgaaataccaacactttgggaggccgaggcagacac-atcacctgaggtcaggagttccaggccagaccggccaacatggtgaaacaccatctctatcaaaaaaatacaaaaattagccaggtgtggtggcacgtgcctgtaatcccagctactcaggagcctgaggcaggagaatcccttgaacccaggaggtagaggttgcagtgagccgagattatgccactgcactccagcctgggcgacagagcaaggctccatctca---------------aaaaaaaaag-------------------agagaaTTAGAGACAAATGGATCAAATCAGCTGCCACCATCAT------------ i macFas5.chr3 C 0 I 13 s papAnu2.JH684865 68758 506 - 317753 TGTGTATAAATGAGCAGTGAGATATTCaagcacagcacacacacacttctcaagACAGCTGTCGTGAGAGTTCCATGCTCATTTCCTTCTGGATACATCAGCAACTCATTCTGCTATGATCCTGCAGTACATCTCATGTTAGAATTAGAGacatctgggctgggcacagtggccaacgcctgtaatcctaacactttgggaagctgaggcaggcag-atcacctaaggtcaggagttcgagaccagcctagccaatatggtgaaacgccgtgtctaccaaaaataca-aaaaattagccaggcatggtagcgcgtgcctgtaatctcagctacttgggagcctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccgagatcatgccattgtactccggtgtgggtgacagagcatgcctctgtctta---------------aaataaaaag-------aaaaagaaaaaaaaagaattagagacaTTTGGATCAAATCAGCTGCCACTGTCAT------------ i papAnu2.JH684865 C 0 I 13 s chlSab2.chr21 124183267 497 - 127223203 TGTGTATAAATGAGCGGTGAGGTATTCAAGCACAGCACACACACACTACTCAAGGCAGCTGTTGTGAGAGTTCCATGCTCATTTCCTTGTGGATATACCAGCAACTCACTCTGCTATGATCCTGCAATACATCTCACGTTAGCTTTAGAGACATCTGggccaggcacagtggctcatgcctgtaatcccaacactttgggaggccgaggcagacac-atcacctgaggtcaggagttccaggccagaccggccaacatggtgaaacgccatctctatcaaaaaaatacaaaaattagccaggcatggtggcacgtgcctgtaatcccagctactcaggagcctgaggcaggagaatcccttgaacccgggaggtagaggttgcagtgagccgagattatgccactgcactccagcctgggcgacagagcaaggctccatctca---------------aaaaaaaaaa-----------------agagagaaTTAGAGACAAATGGATCAAATCAGCTGCCACCATCAT------------ i chlSab2.chr21 C 0 I 13 s calJac3.chr2 1467819 515 + 204313951 TGTGTATAAATGACCTGTGAGATATTCAAACACAGCAAACACACACAACTCAAGACAGCTGTTGTGAGAGTTCCATGCTCATTTCCTTGTGGATACGCCAGCAACTCATT---CTATGATCCTCTGATAAACCTCATGTTAGAATTAGAGACATCTGggtcaggcac-gtgactcacaactgtaatcccaatagtttgggaagccaaggcaggcagaatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctatcaaaaatacaaaaaaattagcctggcatggctgcacatgtctgtgctcccagctactcgggagcctgaggcaggagaattgcttgaacctggaaggtggaggttgcagtgagctgagaccatgccactgccttccagcctggaagacagaggaacactctgtctcC-----------------------ACCCGCCCCCACCCCCGCAAAAAAAAATTCCAGACATCTGGATCAAATAAGCTGCCACCGTCATTTTCCAGTTCCC i calJac3.chr2 C 0 C 0 a score=228415.000000 s hg38.chr17_GL383563v3_alt 48520 108 + 375691 AAAGTGTCGGGTAACATCCTATTAAGCTTGCTGCTTACACATCATCTATAAAATACTGAAAATATCATTTTAAGAAATCtttttttt----attttgagacagagttttgct s panTro4.chr4 121870493 108 + 193495092 AAAGTGTCGGGTAACATCCTATTAAGATTGCTGCTTACACATCATCTATAAAATACTGAAAATATCATTTTAAGAAATCtttttttt----attttgagacagagttttgct i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27581821 108 + 35968885 AAAGTGTCGGGTAACATCCTATTAAGATTGCTGCTTACACATCATCTATAAAATACTGAAAATATCATTTTAAGAAATCtttttttt----attttgagacagagttttgct i ponAbe2.chr1_random I 921 C 0 s nomLeu3.chr17 46830779 108 - 99891981 AAAGTGTCAGGTAACATCCTATTAAGATTGCGGCTCACATATCATCAATAAAATACTGAAAATATCATTTTAAGAAATCTTTTTTTA----ATTTTGAGACGCAGTTTTGCT i nomLeu3.chr17 I 13 I 138 s macFas5.chr3 127728952 112 - 192294377 AAAGTGTCAGGTAACGTCCTATTAAGATTGCTGCACACACATCATCTATAAAATACTGAAAATATCATTTTAGGAAttttttttttttttaattttgagatggagtttcact i macFas5.chr3 I 13 C 0 s papAnu2.JH684865 69277 108 - 317753 AAAGTGTCAGGTAACATCCTATTAAGATTGCTGCATACACATCAtgtataaaatactgaaaatatcattttaagaaatctttttttt----attttgagactgagttttgct i papAnu2.JH684865 I 13 C 0 s chlSab2.chr21 124183777 109 - 127223203 AAAGTGTCAGGTAACGTCCTATTAAGATTGCTGCACACACATCATCTATAAAATACTGAAAATATCATTTTAGGAAttttttttttt---aattttgagatggagttttact i chlSab2.chr21 I 13 C 0 s calJac3.chr2 1468334 105 + 204313951 CAAGTGTCAGGTAATAACCTATTAAGATTGCTGCTCACACACCATCTAT-AAATACTGAAAATATCATTTTAAGAAAttttattttt------tttgagatggagtatggct i calJac3.chr2 C 0 C 0 a score=235271.000000 s hg38.chr17_GL383563v3_alt 48628 114 + 375691 c--gttgcccaggctggagtgcaatggtgcgatctcagctcactgcaatctctgccccctgggttcaagcaattctccttcctcagcctcctgagtagctgggattacaggcatgc s panTro4.chr4 121870601 114 + 193495092 c--gttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctctgccccctgggttcaagcaattctccttcctcagcctcctgagtagctgggattacaggcatgc i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27581929 116 + 35968885 cttgttgcccaggctggagtgcaatggtgcgatctcggctcactgcagcctctgccccctgggttcaagcaattttccttcctcagactcctgagtagctgggattacaggcatgc i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46831025 114 - 99891981 --tgtcacccaggctggagcacagtggcatgatctctgctcactgcaacctctgcctcccaggttcaagcgattctcatgcctcagcctcctgagaagctgggattacaggtgccc i nomLeu3.chr17 I 138 C 0 s macFas5.chr3 127729064 116 - 192294377 cttgttgcccaagctggaatgcaacggcctgttctcggctcactgcaacctccgcctcctgggttcaagcaattctgctgcttcagcctcccgagtagctgggattacaggcatgc i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 69385 116 - 317753 cttgttgcccacgctggagtgcaaaagtgcgatctcagctcaccacaacctctgcctcctgggttcacgcaattctcttgcctcagcctcccaagtagctgggattacaggcatgc i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124183886 116 - 127223203 cttgttgcccaagctggaatgcaacggcctgttcttggctcactgcaacctccgcctcctgggttcaagcaattctgctgcctcagcctcccgagtagctgggattacaggcatgc i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1468439 115 + 204313951 ctttttgcctaggctggagtgcaatggtgcgatctcagttcactgcaacttctgcctcc-gggttcaagcaattctcctgcctcagcctactgagtagctgggattaaaggcatgc i calJac3.chr2 C 0 I 418 a score=35939.000000 s hg38.chr17_GL383563v3_alt 48742 19 + 375691 accaccacgcctggctaat s panTro4.chr4 121870715 19 + 193495092 accaccacgcctggctaat i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27582045 19 + 35968885 accaccacgcctggctaat i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46831139 19 - 99891981 accaccacaccaggctaat i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127729180 19 - 192294377 accaccatgtctgtttaat i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 69501 19 - 317753 actaccacgcccagctaat i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124184002 19 - 127223203 accaccatgtctgtttaat i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1468972 19 + 204313951 accaccacacctggccAAG i calJac3.chr2 I 418 I 107 a score=182058.000000 s hg38.chr17_GL383563v3_alt 48761 118 + 375691 tc-------------tgtattttcagttgagacagggtttctccatattggtcaggctggtctcgaactcctgacctcaggtgatccactgaccttggcctcccaaagtgctgggattacaggtgtgagcc s panTro4.chr4 121870734 118 + 193495092 tt-------------tgtattttcggttgagacagggtttctccatattggtcaggctggtcttgaactcctgacctcaggtgatccactgaccttggcctcccaaagtgctgggattacaggtgtgagac i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27582064 118 + 35968885 tt-------------tgtattttcagtagagacagggtttctccatattggtcaggctggtctcaaactcctgacctcaggtgatccactgaccttggcctcccaaagtgctgggattacaggtgtgagcc i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46831158 131 - 99891981 ttttttttatatatatatattcttagtagagatggtgttacatcatgttgcccaggcttgtctcaaactactgatgtcaagtgatccacccgcctccgcttcccaaagtgctgggattacaggcgtgagcc i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127729199 117 - 192294377 tt-------------tgtatttttagaagaggcagggtttctccatgttggtcaggctggtcttgaactcccgacttcaggtgat-cacccaccttggcctcccaaagtgctggaattacaggtgtgagcc i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 69520 118 - 317753 tt-------------tgtattttcagtagagacagggtttctccatgttggtcaggctagtcttgaactcccgaccttaggcgatccaccgaccttgacctcccaaagtgctgggattacaggtgtgagcc i papAnu2.JH684865 C 0 C 0 s chlSab2.chr21 124184021 117 - 127223203 tt-------------tgtatttttagaagaggcagggtttctccatgttggtcaggctggtcttgaactcccgacttcaggtgat-cacccaccttggcctcccaaagtgctggaattacaggtgtgagcc i chlSab2.chr21 C 0 C 0 e calJac3.chr2 1468991 107 + 204313951 I a score=1666920.000000 s hg38.chr17_GL383563v3_alt 48879 842 + 375691 accatgcctagccAA------GAAACCCTTA-TTTTAAAACAAgcca---------ggcgcggtggctcatgcctataatcccagcactttgggaagccaaggcaggtggatcacttgacgtcagtagtttgagaccagcccgagcaacatgttgtaaccccatctctactaaaaat-ata--ttt--------taaaaattagctgggcatggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggagaaccacttgaacctgggaggtggaggttgcagtgagcagagatcacgccactgcactctagcctgggtgacaatagaaagactccatctcaaaaacaaaacaaaacaaaacaaaacaaaaAACCACTAA-------AAAAAAGACTCCATTTcaaaaacaaaactaaaaccaaaaacacaacacaaaTGTAGTACACAAATGAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAAATacaataagctgcctttttagatgggta----tgttattcttctttcacagctaaagaaacaggctcagagaatgttatttgattggaccGTGTTGCA--TTTCTGGACAGTGCAGCTGAGATCAGACTTTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAACCTTAAGGGAAAGTGAAAATGCTTCTAGAAGGCGACTGGACACCAGCGCCTTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGGCCAACAGTGACCTGAAATTA s panTro4.chr4 121870852 834 + 193495092 accatgcctagccAA------GAAACCCTTA-TTTTAAAACAAgcca---------ggcgcggtggctcatgcctataatcccagcactttgggaagccaaggcgggtggatcatttgacgtcagtagtttgagaccagcctgggcaacatgttgtaactccatctctactaaaaat-ata--ttt-------aaaaaaattagctgggcgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagcggagatcacgccactgcactctagcctgggtgacaatagaaagactccatctca-----aaaacaaaacaaaacaaaacaaaaAACCACTAA-------AAAAAAGACTCCATTTCAAAAACAAAACTAAAACCAAAAACACAACACAAATGTAGTATACAAATGAAAA----TACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAAATACAGTAAGCTCCCTTTTTagatgggta----tgttattcttctttcacagctaaagaaacgggctcagagaatgttatttgattggaccGTGTTGCA--TCTCTGGACACTGCAGCTGAGATCAGACTTTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAACCTTAAGGGAAAGTGAAAATGCTTCTAGAAGGCGACTGGACACCAGCACCTTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGGCCAACAGTGACCTGAAATTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr1_random 27582182 832 + 35968885 accatgcctagccAA------GAAACCCTTA-TTTGAAAACAagcca---------ggtgcagtggctcatgcctataatcccagcactttgggaagccaaggcgggtagatcacttgaagtcagtagtttgagaccagcctgggcaatatgttgtaaccccatctctactaaaaat-ata--ttt--------taaaaattagctgggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagcagagatcatgccactgcactccagcctgggtgacaatagaaagactccatctca-----aaaacaaaacaaaacaaaacaaaacaccatgaa-------aaaaaaGACTCCATTTCAAAAACAAAACTAAAACCAAA-----AACACAAATGTAGTATACAAACGAAAATAATTACTGTGTTAAACACAGTTTCATAGAAAATAAAAGACCAATCAAATACAATAAGCTGCCTTTTTagatgggta----tgttattcttcttttacagctaaaaaaacaggctcagagaatgttatttgattGGACTGTGTTGCA--TCTCTGGACAGTGCAGCTGAGATCAGACTTTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCATAAAAGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAACCTTAATGGAAAGTGAAAATGCTTCTAGAAGGCGACTGGACCCCAGCGCCTTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGGCCAACAGTAACCTGAAATTA i ponAbe2.chr1_random C 0 C 0 s nomLeu3.chr17 46831289 823 - 99891981 actgcgcctggACAA------GAAATCTTTA-TTTAAAAACAggcca---------ggtgcagtggctcacgcctgtaatcccagcactttgggaagcggaggcgggtggatcacttgacatcagtagtttgagacaagcctgggcaacatgatgtaacaccatctctactaagaat-ata--tatatata-aaaaaaaattagcctggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcatgagaatcgcttgaacctgggaggcagaggttgcagtgagcagagatcatgccactgtgctccagcctgggtgacaacagcgagactccatcgca-----aa-------------aaaaccaaaaac-----a-------aaaaCAGACTCCATTT-----aaaaaaacaaaaacaaaaacaaaacacaaaTGTGGTATGGAAATGAAAATAATTACTGTGTTAAACACAGTTTCGTAGAAAATAAAAGACCACTCAAATACAATAaactgtctttttagatgggcataattgttattcttattttacagctaaagaaacaggctcagagaatgttatttgattggaccGTGTTACATCTCTCTGGACAGTGCAGCTGAGATCAGACTTCGTGTGTAATTCCACTAGCCTACCAGGGTGCCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGACACCTTAAGGGAAAGCGAAAATGCTACTAGAAGGCGACTGGACACCAGCACATTTGCTTGTTGCCTTTGGGCTC----TCTAAGACCAAAAGTGACCTGAAATTA i nomLeu3.chr17 C 0 C 0 s macFas5.chr3 127729316 825 - 192294377 accacgcctggccAA------GAAATCCTTATTTTAAAAAAAggcca---------ggctcagtggctcacgcctataatttcagtactttgggaggccaaggcaggtgaatcacgtcaggtcagtagtttgagaacagcctgggcaacatgatgtaatcccatctctactaaaaataataattta--------aaaaaattagctgggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggagaatctcttgaatctgggaggcggaggtggcagtgagtggagatcatgccactgcactctagcctgggcaacaac-gcaaaacttcatctca-----aaaa-----------aaaaacaaaaac-----a-------aaaaCAGACTCCATCTCaaaaaaaa-tcaaaaac--aaaacaaaaaacaaaTGTGGTATGGAAATGAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATAAAAGACCACTCAAATacaataagctgtctttttagatgagtataattgttattcttactttacagctaaagaaacgggctcagagaatgttatttgattggaccGTGTTGCA--TCCCTGGACAGTGCAGCTGAGATCAGACTGTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCACAAAGGTAAAAAATGTAAATTTGGCCTAATATACAAAGTTGCCAGGGCAGCACTGGGTCAATTCTACATACACTACTTCTATGTTCATCAAGGGAAACTTTAGGGGAAGGTGAAAATGCTTCTAGAAGGTAACTGGACACCAGCACCCTTGCTTGTTGCCTTTGGGCTCTTCTTCTAAGACCAATAGTAACCTGAAATTA i macFas5.chr3 C 0 C 0 s papAnu2.JH684865 69638 818 - 317753 actgcgcctagccaa------gAAATCCTTa-tttaaaaacaggcca---------ggcacagtggctcatgcctataatcccagcactttgagaagcaaaggcgggtggatcacttgacgtcagtagtttgagaccagcctgggcaacatgatgtaaccccatctctactaaaaat-ata--ttt--------acaaaattagccaggtgtggtggtgggcacctgtaatcccagcttctcagtaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagcggagatcatgccactgcactccagcctgggtgacaacagcaagactccatctca-----aaaac----------aaaaacaaaaac-----aaacaaacaaaacagactccatttcaaaaacag-----------aaaacaaaacacaaatgtgGTATGGGAATGAAAATAATTACTGTGTTAAACAcagttttgttgaaaataaaagacCACTCAAATACAATAGGCTGTCTTTTTAGATGGGta----tgttattcttattttactgCTAAAGAAACGGGCTTAGAGAATGTTACTTGATTGGACCGTGTTACA--TCTCTGGACAGTGCAGCTGAGATCAGACTTCATGTGTAACTCCACTAGCTTGCCAGGGTGCCTCTCATAAAGGTAAGAAATGTAAATTTGGCCTAATATACAAAGCTGCCAGGGCAGCACTGGGTCAATTCTACATAGATTGCTTCTATGTTCGTCAAAGGAAACCTTAAGGGAAGGTAAAAATGCATCTAGAAGGTGACTGGACACGAGCGCCTTTCCTTGTTGTCTTTGGGCTCTTCTTCTAAGGCCAACAGTGACCTGAAATTA i papAnu2.JH684865 C 0 N 0 s chlSab2.chr21 124184138 822 - 127223203 accacgcctggccAA------GAAATCCTTATTTTAAAAAAAggtca---------ggctcagtggctcacgcctataatttcagtactttgggaggccaaggcgggtgaatcacttcaggtcagtagtttgagaacagcctgggcaacatgatgtaatcccatctctactaaaaataataattta--------aaaaaattagccaggtgtggtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggagaatctcttgaatctgggaggcggaggtggcagtgagtggagatcatgccactgcactctagcctgggcaacaac-acaaaacttcatctca-----aa-------------aaaaacaaaaac-----a-------aaaacagactccatctcaaaaaaaaatcaaaaac--aaaacaaaaaacaaaTGTGGTATGGAAATGAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATAAAAGACCACTCAAATacaataagctgtctttttagatgaatataattgttattcttactttacagctaaagaaacgggctcagagaatgttatttgattggaccGTGTTGCA--TCTCTGGACAGTGCAGCTGAGATCAGACTGTGTGTGTAACTCCACTAGCCTACCAGGGTGCCTCTCACAAAGGTAAAAAATGTAAATTTGGCCTAATATAC--AGTTGCCAGGGCAGCACTGTGTCAATTCTACATACAGTACTTCTATGTTCATCAAGGGAAACTTTAAGGGAAGGTGAAAATGCTTCTAGAAGGTAACTGGACACCAGCACCCTTGCTTGTTGCCTTTGAGCTCTTCTTCTAAGACCAATAGTAACCTGAAATTA i chlSab2.chr21 C 0 C 0 s calJac3.chr2 1469098 804 + 204313951 acca-gcctgaccaacatggtgaaaccccgt-cttaaaaaGAAAACAACAACActgggctcagtggctcacacctataatctcagcacttagggaggctgaagtgggtgtatcacttgacgtcaagagtttgagacaggcccgggcatcatgatgaaaccccatctctactaaaaa--ata--caaaaaaagaaaaaaaattagccatgtgttgtggtgggcacctgtaatcccagcttctcaggaggctgaggcaggagaattgcttcaacctgggtagaggagattgcagtgaacagagatcatgccactacactccagcctgagcaaccacagtgagactccaactca-----aa------------------------------g-------aaaaaagactccatctaaaaaa--------------------------aaaTGTGGTATGGCAAAGAAAATAATTACTGTGTTAAAGACAGTTTCATAGAAAATGAAAAACCACCAAAATACAATAAGCTGTCTTTTTATATGGGTATAattgttattcttattttacagctaaagaaacggactcagagaatgttatttgattgaaccatgttgca--tctctggacagtgcagctgaga-cagacttcgtgcataactccacttgtctaccagggcACCTCTCATAAAGGTAAGGCATGTATATTTGGCCCAATATACAAAGCTGCTGGGGAAGCACTGGGTCAACTCTACA-ACAGTACTTCCAAGTTTATCAAGGGAAACCAGAAGGGAAGGTGAAAATGCTTCTAGAAGGCAACTGGACATCAGCGCCCTTGCTTGTTGCCTTTGGGCTCTTCCTCTAAGGCCAACAGTGACCTGAAATTC i calJac3.chr2 I 107 C 0 a score=88931.000000 s hg38.chr17_GL383563v3_alt 49721 53 + 375691 TTGACTGGCTTTTCCAATCAGGTGGACAAAATGGTACCAAGGTTGCCAACATC s panTro4.chr4 121871686 53 + 193495092 TTGACTGGCTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTCGCCAACATC i panTro4.chr4 C 0 n 0 s ponAbe2.chr1_random 27583014 53 + 35968885 TTGACTGACTTTTCCAATCAAGTGGACAAAATGGTACCAAGGTTGCCAACATC i ponAbe2.chr1_random C 0 N 0 s nomLeu3.chr17 46832112 53 - 99891981 TTGACTGACTTTTCCAATCAAGTGGACGAAATGGTATCAAGGTCGCCAACATC i nomLeu3.chr17 C 0 N 0 s macFas5.chr3 127730141 53 - 192294377 TTGACTGACTGCTCCAATGAAGTGGACAAAAGGGTACCAAGGTCGCCAACATC i macFas5.chr3 C 0 N 0 s chlSab2.chr21 124184960 53 - 127223203 TTGACTGACTGCTCCAATGAAGTGGACAAAAGGGTACCAAGGTCGCCAACATC i chlSab2.chr21 C 0 N 0 s calJac3.chr2 1469902 53 + 204313951 TTGACTGACAGTTCCAATCAACTGGAGAAAATGGTACCAAGGTCGCCAACATC i calJac3.chr2 C 0 N 0 a score=0.000000 s hg38.chr17_GL383563v3_alt 49774 12 + 375691 GATGTAGAACAT e panTro4.chr4 121871739 0 + 193495092 n a score=271186.000000 s hg38.chr17_GL383563v3_alt 49786 3308 + 375691 CGATGTTCTACAACATTGCTTAACGCAAGGGGAGACACTCCTGACTCAGAGTGTTTAATTGCTCACCTACTTCTTTTTCTGCCCTCTTGGGCTTCTGAAATGAAAAGAACCCTGGGGTGATACAGTGAGTCAAAGGGGTGCCAGCCGCATCACAGCAAAATAGATTCCTAAAAAATCCCTGGCCTAAGATGACAGCCTTGGCTGGATCAGTTTGAATGTGCTGATAGTGGACATGGTAGAATGAAGGTGGTTGAAATGTTCATATTAAAGAACTTCCACCCAGATTGCAAGAAAAGAGAGAAGAATGGAGACGGCAGCACAAGCCCCTACAATAAAAGCAGATGTTTTGAGATCAGTTATATTTCTTCTGACAAAAATTAAAGACAGAAACCAAAGTTTAGCCTGAGACTACAATTAATTGGGCAATAAGCCAGAGGCACATATGGCATAAGACAGATTTAAACATTTCTCCCTGATATTAATACAAACACTAAAATTACAAATACATGGATTCCAAATAAAACAAATATTTAAAAAATTTAATGAATAAACACTGGGGTCTACAGTAGTATTTGAAGGAGATCTCACAAACAGGTTTGGTTTTTGAAGGTTAGAACTGGTGGTCTAGAGAATTCATTTCATTCCAGAGAAAGAAAGAGAGGAATTTCTTGGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATACAGCAGAAGAAAACATAAGGATTTCACAGATTTAAGGTGCAAAAAGTCACTGGGTTCTCTAAGAAGTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGAGGAGGCTGTTATTGAAGTGAAGCAGAACTGTTTTTACTAATCTGCTTATTACCCACTCTGTAGTGTGGAAACAAATTATTCATGCACAAGGTCCTCTTACTGTTCCTAGAATGCAGTGGAAAGAGAACAGATTAGTTTTCCTCCCTCAGAACACAACCCCTAGAAACATCCTACCTCAGATGAGATATTGCCTAATTATTTTCAAAAGACAGTGAAACATCATGGATGTAAATGTTTGCTACAAAATAAATACATGCTAGAAACAGAAGCATCTGGGTCACAGCTATATTAGAGCTACCTGTGTTCCCCTGTCACTGACATTAAAACAAAAATGTCCAATACAATCATTCACAGCGTGGGAGAGGGGAAGTTGAAGGATGGAAAGGCCAGGCATAAAAGGATTTCAGAATTTCCGTCCATAAGGAAGTGGCTTTGTGCACTGTCTGTTACTGCGTGCAAGGTGAAATTTGAAGAATGAAAACGTGCAGTAACAAGGGCTCCTTTGTCCAACTCACCTCTCCAGATACCAAGTTTCAGACATGTTGCATTTGAATTGAAAGGTTGATATAATTTTTTTTAAAG-AACACTTGCGGTGTTTGAAGTGACAAAGGCTGCTGTGACAAAAAAGCAGGGAAAGGGAATTTTTTTTTT------------AAAAGCAaacaacaacaacaaaaaccccacagaaaagcaaacaacaaacaaacaaaaaacaGAGGAAGAAGTT-GAACACCCCGGGCTGTGACTACTTCCAGGAAGGGGCTACAAGAGGCAGTTGGAAATTCTATTTGTTTTGCAACTGTGGGTTTTCCGGCCTGCTTCCTTTCTAAAGTATATTACTCTGCTTTTGGTTCATGAAGTTATCCATTTCTGTTTTCTGGAACAGctatgtattttctttat-------------------ctatcatctatctatctatttaccatctatcttttctacctTTTGCTATCAAGAGCTTGTGTCAAGCAGGATAGAATTCCAGTGTATGTTCACTCTACCGTTTAAAACAAGAGCTCTTGTGGGCATTCTCCATCACATCATAAACCTGAGCTTTCTAAAAcagagtgtggcaaactaccatgcatggaccatgtctgacacagtctgcgtttgtaagtaaagttgtaatgggacacaaccaatacatgtgttacataatgtctctggctactttcatggtataatggaagagctgagtcattgagagagagaccatatggcttggaaaacttaaaatatttaacatttagccccttgcagaaaatacttgctgactcttgTTTTAAAAGATCTCTGTTTAGAATGCTACCTATTGCGTTCTGGATAGAATCACAACTCTTTACCACAATTGACACAGCTTCAgccctgcttctatatccagcctcatctatttctgctcctcctccttattttccttctggccatgctgatggattgtcagcttcccagatgtgcaagaatctctcctcccttcccaacattctcatgctctccctctgcctctcaagaacttcctgccccatctctcatgacaaatcctttctacattctttaagatgcagcccctttgctccttccttaaggatgtctgtctggctctattttgggtgacgtgctccttctgcatctcccagagccagcctgtgtgtgtcagctacaacatttctttgcatctctgtgtcATATATCACCAAATCTGCCTAAGCTTGCATGAGTCACTGCATGACAACTTCAGACTCCACCAGCATTGTCCCCACTAACCACAAGGCTTAGACATTCGTCCAGTATGCTCAGGGTTGTGGGGTGGTAGCAGTAACCAGCTGGTGACCATCATTTCTTACATCAGAATCAAATCTGTAGATCTCTGCCATTCGTAAGTATTTGGAGTTTAAAATTAGCATAAAGATTTTCCTTAAAATAAGAACAAATAGCTTGAGTAGGCTTTTGGAACGTAGGATGTTTCCACTGGTTCATTTCTGTGTTCAATATTCCCACATGAATCTAAACACgactctgctcttagtagctatgtgaccctgggaaagtcactcaatctcccgcagctaaattttgttgtgtgagtaatgaggagagagttgtgatttgtatttagagaataataacaaacaaaaggcatttagctttctggaacctggtatgtagtagaacctcatgaaatactagctctgttGATAAAACTAGACTGAAAGAAGCTTTCAAAGTCAACAAAAGTTTGAGGCAGTGAAGGACGTAGAGGAGAA------GCTGCTGCTGCAGCCTGTAGCTCCTGGAAGCCCGTTTAGTCCATGATTTAGCAGGAATGCATTACCCTTCCATGAGGAGGCACTGCCCACAGAAACCAAGGCCATTCTTTGAAGACAAACATGTCTTAATAGCCTTTACATTATGTAATAGTGTAATACAAATAATAATTTATTATTAGTAATAATGTGAAATTATTTACAGTa s nomLeu3.chr20 21109 3327 + 85365473 CGATGTTCTACAACATTGCTCAACACAAGGGGAGACGCTGCTGACTCAGAGGGTTTAATTGTTCACCTACTTCTTTTTCTGCCCTCCGGGGCTTCTAAAATGAAAAGAACCCTGGGGTGATAAAGTGAGTCAAAGGGGTGCCAGCCGCATCACAGCAAAATAGATTCCTAAAAAATCCCTGGCCTAAGGTAACAGCCTTGGCTGGATAAGTTTGAATGTGCTGATAGTGGACACAGTAGAATGAAGGTGGTTGAAATATTCATATTAAAGAACTTCCACCCAGACTGCAAGAAAAGAGAGAGGAATGGAGATGGCAGCATGATTCCCTGCAATAAAAGCAGATGTTTTGAGATCAGTTATATTTGTTCTGA-AAAAAATAAAGACAGAAACCAAAGTTTAGCCTGAGGCTACAATTAATTTGGCAATAAGCGAGAGGCACATATGGCATA-GACAGATTTAAACACTTCTCCCTTATATTAATACAAATACTAAAATTACAAATAAATTGATTCCAAATAAAACAAATATTTAAAAAATTTAACGAATAAACACTGGAGTCTATAGTAGTATTTGAAGGAGATCTCACAAACAGGTTTGGTTTTTGAAGGTTAGAACTGGTGGTCTAGAGAATTCACTTCATTCCAGAGAGAGAAAGAGAGGAATTTCTTAGGTTCCTTCAGGAATGCGTCTAGCTTTGCCTCATCTTTGTTTGAACTATGGATATGGCAGAAGAAAACATGAGGATTTCACAGATTTAAGGTGCAAAAAGTCACTGGGTTCTCTAAGAATTCTGGGATTCTTCTGCTGGAAAAATAAGTTTGTTGAGAAAAAATGAGTTGGAGGAGGCTGTTACTGAAGTGAAGCAGAATTGTTTTTACTAATCTGCTTGTTAACCACTCTGTAGTGTGGAAACAAATTATTCATACACAAGGTCTTCTTACTGTTCCTAGAATGCAGTGACAAGAGAACAGATTAGTTTCTCTCCCTCAGAACACAACCACTAGAAACATCCTACCTCAGATGAGTTATTGCCTAATTATTTTCAAAAGACAGTGTAAAATGATGGATGTAAATGTTTGCTACAAAATAAATACATGCTAGAAACAGAAGCATCTGGGTCACAGCTATATTAGAGCTGCCTGTGTTCCCCTGTCACTGAGATTAAAACAAAAATGTCCAATACAATCAATCACAGCATGGGAGAGGGGAAGTTGAGGGATGGAAAGGCCAGTCATAAAAGGATTTCAGAATTTCAGTCCATAAGGAAGTGACTTTGTGCATTGTGTGTTACTGTGTGCAAGGTGAAGTCTGGAGAAAGAAAACGAGCAGTAACAAGGGCTCCTTTATCCATCTCACCTCTCTAGATACCAAGTTTCAGACATGTTGCATTTTAATTGAAAGGTTGATATAATTTTTTAAAAAATAACACTTGTGGTGTTTGAAGTGACAAATGCTGCTGTGACAAAAAAGCAGGAAAAGAGAA-------TTTAAAAAAAAAAAAAAAAGCAAACAGCAACAAAAAAAAACCCACAAAACAGCAAGCAACAAACAAACAAAAAACAGAGGAAGAAGTCAAAACACCCTGGGCTGTGACTACTTCCAGGAAGGGGCTACACGAGGCAGGTGGAAATTCTATTTGCTTTGCAACTGTGGGTTTTCTGGCCTGCTTCCTTTCTAAAGTATATTACTTTGTTTTGGGTTCATGAAGTTATCCCTTTCTGTTTTCTGGAACAGctatgtattttctttatctatcatcaatctgcctgcctatcatctatccgtctatttactatctctcttttctacctttcGCTATCAAGAGCTTGGGTCAAGCAGGATAGAATTCCAGTGTGTGTTCACTCTACCATTTAAAACGAGAGCTCTCGTAGGCATTCTCCAGCACACCATAAACCTGAGCTTTCTAAAACAGGGTGTGGCAAACCACCATGCATGGGCCGTGTCTGACACAGTCTGCATTTGTAAGTAAAGTTGTAATGGGACACAGCCAATACATGTGTTATATAATGTCTCTGGCTACTTTCATGGTAAAATGGAATAGCTGAGTCATTGAGAGAGGGACCATAtggcttggaaaacttaaaatatttaacatttagccctttgcagaaaatatttgctgactcttgTTTTAGAAGATCTTTGTTTAGAATGCTACCTATTGCCTTCTGGGTAGAATCACAACGCTTTACCACAGTCAACACAGCTTCAGCCCTGCTTCTATATCCAGCCTCATCTATTATTTCTGCTGCTTCTCATTTTCCTTCTGGCCATGCTGATGGATTGTCAGCTTCCCAGATGTGCGAGAATCTCTCCTCCCTTCCCGACATTCTCATGCTTTCCCTCTGCCTCTCAAGAACTTCCTGTCCCATCTCTCATGACAAATCTCTTCTTCATTCTTTAAGATGCAGCCCCTTTGCTCCTTCCTTAAGGGCGTCTGTCTGGCTTCATTTTGGGTGACGTGCTCCTTCTGCATCTCCCAGAGCCAGC----ATGTGTCAGCTACGGCATTTCTTTGC----CTGTGTCGTATATCACCAAATCTGCCTAAGCTTGTGTGAGTCACTGCATGACAACTTCAGACTCCACCAGCATTGTCCGCACTAACCACGAGGCTTAGACATTTGTCCAGTAAGCTCAGGGTTGTGGGGTGGTAGCAGTAACCAGCTGGTGAGCATTATCTCTTACATCAGAATCAAATCTGTAGATCTCAGCCATTCATAAGTATTTGGAGTTTAAAATTAGCATAAAGATTTTCCTTAAAATAAGAATAAATGGCTTGAGTAGGCTTTTGGAACATAGGATATTTCTGCTGGTTCATTTCGGTGTTCAGTATTCCCACATGAAtctaaacatgactctgctcttagtagctgtgtgaccctgggaaagtcactcaatctctctcagctaaattttgttgtgtgagtaatgagaagagagttgtgatttgtatttagtgagtaataacaaacaaaaggcatttggctttctggaacctggtatgtagtagatcctcatgaaataccagctctgttGATAAAACTAGACCGAAAGGAGCTTTCAAAGTCAACAACAGCATCATGCAGTGAAGGACGTGGATGAGAAgctgctgctgctgctgcagcctgcagctcctgGAGGCCCGTTTTGTCCATGATATAGCAGGAACGCACTACCTTTCCATGAGGAGACACTGCCCACAGAAACAAAGGCTATTCTTTGAAGACAAACATGTTTTAATCATCTTTACATTACGtaatagtgtaataaaaataataat---ttattaataataatataaaattatttatatta i nomLeu3.chr20 N 0 I 3958 e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 53094 486 + 375691 ccctaaccctaacccctaatcctaaccctaacccctaaccctaatcctaacccaaaccctaaccctaaccctaaccctaacccaaccctaaccctagctcctaatcctaaccctaaccctaaccctaaccctaacccaaccctaaccctagctcctaaccctaaccctaaccctaaccctaaaaccctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaaccctaaaaccctaaccctaaaaccctaacctgaaccctaacccgaaccataaacctgaaccctaaacccgaacccgaacccgaaccctaaccataacccaaacccgaaccctaacccctaacccctaaccctaaccctaccctaacccaaccctaacccaaccctaactctagccctagccctagccctagccctaagccctaagccctaagcctaaccccaaccccaaccccaaccccaaccctaaccctaac e nomLeu3.chr20 24436 3958 + 85365473 I e panTro4.chr4 121871739 0 + 193495092 I a score=69044.000000 s hg38.chr17_GL383563v3_alt 53580 1090 + 375691 cctTCCTCAGCCTCTCAACCTGCTTGGGTTACAGGTATGAGCCCGGGTGCCTGGCcaaacat-tccattttatatgtatatgctaggaatgaataatctctaaaccaaattatgaaaattctaccttaaacaataccaatagcaatattatacttaggaataaatggaatgaaacgacaagacttagatgagggaaattataagacattacttaaggaaattaaacttccaataaatgtaaaaatgtatcttatttgtggatttgtagaccacattgtt-aagtttcccaaagtacacaaagcaatccgtggattcgatgttattcctacaaaaatcccaaaggccttgggacagaagtggataagctgatcctgat-------------------------------------------------------------------------cacatcccaatttcaaattttattacaaaggaacagtaataaaaacagtgggatccttgcacaggaataaacagaaagatcaactgaattgaattgggagtccagacagaaaacaatacctctatgctcaactgattttagacaaggtccattaccagtaaattggggaaagaatcctgtcctcaacaagtgatgtaaggcaacttgctatccacataaagggaaatgaaattgtatccttacctcataccacataaaaaa-ttaacttacaatggatcgaagaccaaaacaggtgaaaactaaaaactctggaagaaaacatacagttaagcattcatgaccttacatgtagcaatagtttcttacatctgacaccaaaagcacagaccacaaaaggaaaaataaatcaatttatttcctcaaaatttacaacttttacgtctcagaagacatgaagaaaaaagttgaaagacaaAAT-GTTATAAtaggaaaaacaactgtcttatagtatactctcaacactcaacacagaacacttctgttaccagatacatgggttttttccccacacagaccaaatcttgggtaccagctgggtgtcctacagtgcaatccaattgtgacagtaaatggagaaagcatcagaccccataggctaagggctcagtcctaGGAATACACATCATGCCCcttgttgcttgcaaat-ttaaatgac s calJac3.chr8 91742295 1152 - 128169293 cctgcctcagcctcccaaaatgctgggattactggcataagccaccatgcttggccAAaaaaatccattttatatgtatacaccagcaatgaataatctgaaaacaaaattacaaaaattccactgcaaataataccaatagcaataatatacttaggaataaatgtaatcaaagggtaagacttagaaggggaaaattataagatattgcttaaggaaattaaagaccaaataaatgtaaaaacatgtcatatc-atggatctgaaaaccatattttttaagtttgccaaactacacaaagcaatctacagattcagtgttattcctatgaaaatcccaaaggtcttgggacagaaatgagaaagctgatcctaatgtttatacgaaatttcaaggaaccctgaaaagccaaaccaatcctgaaaaataactccaaatctggaggtttgcacatcccaacttcaaatcttactacaaagcaatagtaatcaaaacagcatgatactggcacaagaataaacagaaagatcaa-----ttgaattgggagtccagacataaaacaatacctccatgctcaactgattttagacaagatccatatccattaaattggggaaaaaatgctgtcctcaacaagtgatgtaaggcaacttgctgtccacacagagggaaatgaaattgcatccttacctattaccacataaaaaaattaacttaaaatggatcgaagacctaaatattacaaaacctaaaactctataagaaaacaaacagttaaaccttcatgaccttggatgtagcagtagtttcttagatctgacaccgaaaccacaaaccacaaaaggaaaaataaatcaattgatttcctcgaaattcaaaacttttacgcctcagaagacatgaaaaaaaaa-ttgaaagacaaAATTGTTATAAtaggaaaaacaactgtcttctattatgctctcaacactcaacaccaaacacttctgttaacagaggcatgggttttttccccacacagaccaaatcttgggtaccaactaagtgtc---------aatccaattctgacactaactggagaaagcatcagaccccacaggctaagagctcactcctaGGAATGCAGGTCATGCCTCTTGTTGCTTGTGTTTGTCAACTGAC i calJac3.chr8 N 0 I 5 e nomLeu3.chr20 24436 3958 + 85365473 I e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 54670 13 + 375691 aaacacaaggatg e calJac3.chr8 91743447 5 - 128169293 I e nomLeu3.chr20 24436 3958 + 85365473 I e panTro4.chr4 121871739 0 + 193495092 I a score=42116.000000 s hg38.chr17_GL383563v3_alt 54683 591 + 375691 gtaaaaagaaagtgactttatgccagagcttagctgaagggaacgtacaggctcttgccttaagggaagcgcttccactttctgggcagaaagcggggccttc-------ggacttgccagaatggcatgcaggggatgaggtgaggaggtgcggggtctatgggacatgctctgatgttttctccattaggtggtcttgctagcaccatcacgggcagagccaggttgtaaattgactgttgtctgctgccaatctcctggtgggggagagatatggaagtgcc-agtttgtttcaaggtttggtccctggaacttacaagtaatcacacagttggaaaagtttgcagtataggaagtgtctggtggagagacagtaaagcttataattgcattcctaaagagctaaat-------gcaggaacagcaaaatggtaaaactaattcatttcttctttaagaaaatatgggtactcagttacaagactgtaaccacttaagatgccaaccagaaacagtaggttcccaggttaccttctgtctgactttgctacagattggaggctcccacaacacccttattgggttcagcaatttgctacatca s calJac3.chr8 91743452 602 - 128169293 gtaaaaagaaagtgactttatgccagaactcagcagaaggaaacatagaggctcttgccttaaggaaacagcttccactttcggggcagaaagtgggagatttaaaaaggggacttcacaggatggtatgcaggggatggggtgaggaggtgcagggtctatgggacttgctctgacgttttatccattaagtggtcttgccaacaccaccacaggcagagctgggttgtaa-ctgactgttgtct--tggcaatctcctggtgggggagagtt-tggagatgcctagtttatttaaaggtttggtccctggaacttctaagtaaacacacagtaagaaaagtttccagtgtaggaagtgtctggtggagagacagtaaagcttataattgcattcctaaacagctaagtaggaagtgcagaaaaaggaaaacagtaaacgtaattcattttttctttaagaaaatatgggtactcagttataagactgtaactacttaagatgccaatcacaaatagtaggttcccaggttaccttctgcctaacttggctatagattggaggctcccacaacacccttattgggttcagcaatttactacagca i calJac3.chr8 I 5 C 0 e nomLeu3.chr20 24436 3958 + 85365473 I e panTro4.chr4 121871739 0 + 193495092 I a score=349734.000000 s hg38.chr17_GL383563v3_alt 55274 1558 + 375691 cattacaca---acccatgaaagcagtgtacttactattcctgactcattaccaaggatcttttaaacactacaaatgaaaagccagatgaagagaggcacaaggtgaggtacatggaaggaatgcaggcctcccatgccctcgccagatatgatcctcccagtatct-cctgtgttgggagagcaacacagatgctctcccaaccctgtcctttattacacaggcagattggttacgtctgtggccataggtgatcaactcaaccatcagcacctctccccttcacagagacgggacgggggaagaaatttcaaattctctcatgacaaggttgcttcccttggcagccagccccactgagggtgtccaggtgcccccagccatcaatcatttcattagcatacgaaacacacattacttcgtacattcccaaggcttagcgctctgtttcaggacactgcagcagagaccacacattaACTCTTATTACGTTCCAacaacctataaaatggaagaaaatg-tctgcacattagatacttcatcagtgtctgttatccagaatgtataaagaacttttacaactccatagcaaagacaacccaatctaaaaattgacaaaagactttaatacacacttcaccaacaagcacatgaaaagatgcttaacatcatta-ccataattaaaaccataaagagataacccttaactcacacaagaatagttatactaaaaaataacaagtgttgacaaagatgtgcagaaacttgaactcttaaacactgcttgtgacaatatgaaatggtgcagcctacgtgtaaaataatttgatgtttcctcatgaagttacaaatagatttaccatatgagtcaatgattccattcctaggtatataccccaaagacctgaaaacaactgttcaaacaaaaacctgtatgctctttaaatgtgtcaaggtcataaatatgcaggaaagtctggggaacagttccaggaaaagaaaactGGATCCTAATGAAAAAAAAAAAAA------CACATTATACTCCCAAGTGTGGCATGAggtaaaagtgaagtgagtttgtggaccgaattatcatgtaggaacaatgctgatttcctgatctaggggttatgtggtagttacctgggagagtgtccatgttttcagtacaatataccggagtatttTGTGGGACACTgcaaatctggtacagcaataactgttggggaatctaagggaagaaacaagttgtactttgtactactactggaagttgcctagaaatatgacattattggaaaataaGTTACTTTTTAAAACAACCATGTCAATACCATGCCAGGAAAGCAGACACATCATCAAAATCCATTGCAGAGGCTATAGTTCAGCCAAAGCTGTAAAACCCTTAAAAAAGTCTCAATGTCAACAGAGTCCACGTAGTAGATATTATTATATTTATTAGTATTAGAGGCCATTGTGTCAATATATTAGTGTTAGGGCATGGTATGGGTGTCTAGATTAGTGTTAGGGAATGGTGTGGATATTGTATTGGTGTTAGGGAATG s nomLeu3.chr20 28394 1563 + 85365473 cagtacacagttatccatgaaaacagtgtacttactattgctgacttattaccaaggatcttttaaatgctacaaattaaaagccagatgaagagatgcacagggtgaggtatgtggaagggatgcacatctcccattccctctccagatatgatcctcccagtatct-cctgtgttgagagagcaacacagacgctctcccaaccctgtcctttattacacaggcagattggttacattagtggccataggtgatcaactcaaccttcagcacctctccccttcacagagacaggagaggggaagaaatttcaaatcctgtaatgacaaggttggttcccttggcagccagccccactgaggctgtccaggtacccccagccatcaatcatttcattagcatacgaaagacacatcacttcgtacattcccaaggcttagcgctctgtttcaggacactgcggcaaagaccacacattaACTCTTATTATGTTCCAataacccataaaatggaagaaaaaaatctacacattagatacttcattagtgtctgttatccagaatgtataaataacttttacaactccacaacaaagacaaccaaatctaaaaattgacgaaagactttaatacacacttcaccaataaacacatgaaaagatgcttaacatcatta-tcataattaaaaccatgaagagataccccttaactcacacaagaatagttatactaaaaaataacaactgttgacaaagatgtgcagaaacttgaactcttaaacactgcttgtgacaatacgaaatggtgcagcctatgtgtaaaataattgggtgtgtcttcataaagttacaaataaatttaccatatgactcaatgattccattcctcggtatataccccaaagacctgaaaacaggtgttcaaacaaaaacctatatactctttaaatgtgtcaaggtcataaatatgcaggaaagtctggggaacagttccaggaaaagaaaactGGATCAGAATGAAAAAAAAAAAAAA----CCACATTATACTCCCAAGTGTT-CAGGAGGTAAAAGTGAAGTGAGTTTGTGGACTGAATTATCATGTAGGAACAATGCTGATTTCCTGATCTAGGAGTTACGTGGTAGTTACCTGGGATAGTATCCATGCATTCCATACAATATACCGGAGTATTTTGTGGGACACTGCAAATCTGGTACAGCGATAACTGTTGGGGAATCTAAGGGAAGAAACAAGTTATACTTTGTACTTCTACTGGAAGTTCCCTAGAAATATGACATTATTGGCAAGTAAATTACTTTTTAAAACAACCATATCAATACCATGCCAGGAAAGCAGACACATCATCAAAATCCATTACAGAGGCTATAGTTCAGCCAAAGCTGTGAAACCCTTTAAAAAGTCTCAATGTCAACAGACTTCACTTAGTAGATATTATTACATTTATTAGTATTAGAGGCTACTGTGTGGATATACTAGTGTTAGGGCACGGTATGGATATTTAGATAAGTGTTAGGGAATGGTGTGGATATTGTATTGGTGTTGGGGAATG i nomLeu3.chr20 I 3958 C 0 s calJac3.chr8 91744054 1542 - 128169293 cattacaga---actcacaaaagcagtatacttaccattgctgacttattaccaaggatatttcaaaggctacaaatgaacaaccaaatgaagagatgcacaaggtgaggtatgtgaaagaggtgcaagcctcctaagccctctccagatatgattctcccatcatctccccatatt----cagcaacacagatgctctcctaaccctgtcctttattatgcaggcagattggttgcatcagtggccataggtgatcaactcaaccatcagcacctctctccttcacagagatgggaggggagatgaaatttcaaatcctctaatgacaaggttggttcctttggaagccagccccactgagggtgtccaggtgcccccagccatcagttatctcattagcatacaaaagacacatca-----tatgttccaaaggcttattgctctgtttcagaacaccacagcagagaccacacattaACTCTTACGATGTTCCAataacacacaaaatggaagaaacaa-tctgcacattagatacttcaaaagtgtctgttatccagaatgtgtaaataatttttacaactcaacaacaaagacaacccaatctaaaaaatgac-aaggactttcatacacactgcaccaacaagcacctgaaaagatgcttaacatcattagtcataattaaaaccataaaa----aacccttaaatcacactataatagttatacta---------aagtgttaacaaagatgtgcagaaacttgaacccttaaacactgcttgtgacaatatgaaatggtgcagtctatgtgtaaaataatttggtgtttcttcaaacagttaccaatagatttacaatatgactcaatgattccattcctaggcatatatcccaaagacctgaagacaggtgttcaaacaaaaacttgtaTGCTCTTTAAATGTGTCAAGGTGACAAATATGCAGGACAGTCTGGGGAACAGTTCCAGGAAAAGAAAACTGGATCAGGATGGAAAAAAAAAAAAAAAACACACATTATACTCCTAGGtggggcaggaggtaaaagtgaaatgagattgtagactgcattatcatataggaaccatgctgatttcctgatctaggacttatttggtggttacctgggagagtgtctatactttgggtaaaatatactaaagtatttTGTGGGACATTGTAAATCTGGTACAGCAATAATTGCTGTGGAAGCTAAGAGAAGAAACAAGTTATACTTTGTACTGCTACTGGAAGTTTCCTAGAAGTATGACATTATTGGAAAGTAAATAACTTTTTAAAACAACCATATCAATACCATGCCAGGAAAGCAGAGACCTCATCAAAATCCATTATAGAGGCTACAGTTCAGCCAAAGCTGTGAAATCCTTATAAAAGTCTCAATGTCAACAGAGTCCACTTTGTAGATATTATTACATTTATTAGTATTAGAGGCTATTGTGCAGATATATTAGTGTTGTGGCATGGTGTGGATAT-TAGATTAGTGTTAGGGCATGATGTGGATATTTTACTGGTGTTAGGGCATG i calJac3.chr8 C 0 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=86403.000000 s hg38.chr17_GL383563v3_alt 56832 1142 + 375691 GTGCAGATATTACATTAGTCTTAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGAAAGCGATGGTGTGGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGAAAGCGATGGTGTGGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTACATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG-----ACTACATCAGTGATAG--GGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG-----ATTACATCAGTGATAG--GGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGATTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGG s nomLeu3.chr20 29957 1156 + 85365473 GTGCAGATATTACATTAGTGTTAGGACATGGTGTGGATACTATTACATTAGTATTAGAAGCGATGGTGTAGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGTGTTAGAGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTAGATTAGATCAGTGTTAGGGCATGGTGTGGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGTGGATTAGATCAGGGTTAGAGCATGGTGTGGATATTATTGCATTAGTATTAGAAGCAATGGTGCGGATTAGATCAGTGTCAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTGCATTAGTATTAGAAGCGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGCGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTGCATTAGTATTAGAAGCGATGGTTTAG i nomLeu3.chr20 C 0 I 208 e calJac3.chr8 91745596 0 - 128169293 C e panTro4.chr4 121871739 0 + 193495092 I a score=7524.000000 s hg38.chr17_GL383563v3_alt 57974 126 + 375691 ACTAGATCAGTGATAG--GGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGGTGTGGACTAGATCAGTGATAGGGCATGGTGTGGATATTATTACATTAGTATTGGAAGCGATGTTGTGG s nomLeu3.chr20 31321 128 + 85365473 ATTACATTAGTATTAGAAGTGATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTGTGGATTAGATCAGGGTTAGACCATGGTTTAGATATTATTACATTAGTATTAGAAGTGATGGTTTAG i nomLeu3.chr20 I 208 I 180 e calJac3.chr8 91745596 0 - 128169293 C e panTro4.chr4 121871739 0 + 193495092 I a score=4046.000000 s hg38.chr17_GL383563v3_alt 58100 64 + 375691 ATTACATCAGTGTTAGCG--CATGGTGTGAATATTATATAGGTGTTAGGACACGATGTGGATATCA s nomLeu3.chr20 31629 66 + 85365473 ATTACATTAGTATTAGAAGTGATGGTGTGGATATTATACTGGTGTTAGGGCACGGTGTGGATATCA i nomLeu3.chr20 I 180 I 1 e calJac3.chr8 91745596 0 - 128169293 C e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 58164 1 + 375691 T e calJac3.chr8 91745596 0 - 128169293 C e nomLeu3.chr20 31695 1 + 85365473 I e panTro4.chr4 121871739 0 + 193495092 I a score=489.000000 s hg38.chr17_GL383563v3_alt 58165 16 + 375691 AGTAATGTAGGGCAC---------------------A s nomLeu3.chr20 31696 37 + 85365473 AGTAATGTAGGGCACATGACTACACAGTAATGTAATA i nomLeu3.chr20 I 1 C 0 e calJac3.chr8 91745596 0 - 128169293 C e panTro4.chr4 121871739 0 + 193495092 I a score=242019.000000 s hg38.chr17_GL383563v3_alt 58181 1249 + 375691 GTGTGATTATTATATTAGAGGCCACTGTAAGAATATATATTAACAGCCACTGTGTCTTGGACGTTGACAATGATATTAGGGTGTAGTCCAAACAGTGAGATTTGGGGGTTTTATTTTTCTAGATGAATTTCTTCCTCTGCTGAGTGCTCTAAAGACTCACTCCTTGGCACTCAGGGCCGTGGACAGG-AGCTTTTTACTCACCAATGAAGAACACCAAGTTAACGCGACCCCCGTGCTGCCCTGAGGAAGTCGAAGCTCCTCGCTGCTTCTGGCACCTCAGCGGGAAGTTGGTT-GCGGCGGGATCGCGCGCCCTCTGGTGGCGCCATGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGTGCGCC---CCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCGAAATAAAGGCCACTATATCCATAtccttcccataaatggtgatggaagaattatttggaagccatatagaatgaaatgactctatacacaaattaaaacac-----------------------------------------aaaaacctactcaaaatagtccagagactacaacttcaaatgcaaaactataaataatctaaaagaaaacctaagagacattcgatctggtgttgagttttaacacacagcatcaagtgccaattcgtgaaaatactgaga--ac---agactttataaaactaaattttctactatgaaaaaccctattcagagaacaaaaagacaagacacactgtgagaagatatttacaaaatacaaacatgattttaaaaactgtattgaaaatacacaaagaactcttcaaacgaacactaagaaaactaaaaacccacataaaactgggtaaatatctgaacagacatccagccaaataaaatatatagatagcaggccaggtgtggtggctcatgcctataaccccagcactttgggaggctgaggtgggtgagtcacctgaggtcaggaatttgagatcagcctggccaacatagtgataccccc--------tctctactaaaaatacaaaaaaattagccaggcatggtggtgagtgcctgtaatcccagctacttgggaggctgatgcaagagaattgcttgaacat-cggaggtggaggttgcagtgacccaggatcacaccactgcactccagcctgagtgacagaatgagactctatctcaat----aaaaaaaaaagaaaaaagaaaaa-----------------------------------------aaagaaaatatacagatag s nomLeu3.chr20 31733 1291 + 85365473 ATGTGATTATTATATTAGAGGCCACGGTAAGAATATATATTAGCAGCCACTGTGTCTTGGACGTTGACAATGATATCAGGGTGTGCTCCAAACAGTGAGATTTGGTGGTTTTATTTTTCTAGATGAATTTCTTCCTCTGCTGAGTACTCTAAAGACTCACTCCTCGGCACTCAGGGCCGTGGACAGGAAGCTTTTTACTCACCAATGAAGAACACCAAGTTAACACGACCCTCGTGCTGCCCTGAGGAAGGTGAAGCTCCTCGCCGCTTCTGGCACCTCAGCGGGAAGTTGGTT-GGGGCGGGATCGCGCGCCCTCTGGTGGCGCCATGGTTCAGCACAGACGCTCTTGCTCACAGTTTCTCGGCGGATGCGCGCC---CCCTCCTGGCTGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAGTGTCATAATTTTGGAAATTCAAACCAAAATAAAGTCCACTATATCCATATCCTTCCCATAAATGGTGATGGAAGAATTATTTGGAAGCCATATAGAATAAAATGAGTGCATACACAAATTAAAACACAAAAACCTAAAACTTAAAGTATAATAATAAAAAAATTTAAAaaaaacctactcaaaatagtccagagactataatttcaaatgcaaaact----ataatctaaaggaaaacctaagtgacactggagttggtgttgagttttaacacatagcatcaaatgccaattcgtgaaaatactgagaacac---agactttataaaactaaattttctactgtgaaaaaccctattcagagaacaaaaacacaggacacactttgagaagatatttacaaaatacaaacgtgattttaaaaactgtactgaaaatacacaaagaactcttcaaaggaacactaagaaaactaaaaaccca-ataaaactgggtaaatatatgaacagacacccagcaaaagaaaatgtatagatagcaggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggtgagtcacctgaggttaggaattcgagatcagcctggccaacatagtgataccccc--------tctctactaaaaatac-aaaaaattagccaggcgtggtggtgggtgcctgtaatcccacctacttgggaggctgatgcaggagaatggcttgaacatgggggggtggaggttacagtgagccaaaatcccgccactgcactccagcctgagtgacagaacgagactccatctccat-taaaaaataaaaagaaaaaagaaaaa-----------------------------------------aaccaaaatatacagatag i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91745596 1233 - 128169293 GTGTGATTACTATATTAGAGGCCACTGTGACAATATATATTAGCAGCCACTGTGTCTTGGACACTGACA---ATATCAGGGTCTAGTCAAAACAGTGGGATTTAAGGGTTTCATTTTTCTAGATGGATTTCTTCCTCTGCTGAGTACTCTCTAGACTCTCTCCTCTGTACTCAGGGCGGCGGACAGGAAGCTTTTTACCCACCAATAAACAACACCAAGTTGACAAGACCCCCATGCTGCCCTGAGGAAGATAAAGCTCCTTGCTGCTTCTGGCACCTCAGAGGGAAGTTGGTCAGGAGTCCGTGCATGCCCCCTCTGGTGGCACCAGGGCTCAGCACAGA------TGCTCACAGTTTCACAGCGGATGTGCACCTCTCCCCCACAGATGTCCTGAAATACCTATAAAATTCAATATTCAGTTTATTCAATGTCATAATTTTGGAAATTCAAACTAAAATGAAGCTCACTATAACCATAtccttccaaaaaatggtgatggaagaattatttggaagccatatagaatgaaatgaatgtacacacaaattaaaacac-----------------------------------------aaaaacctactcaaaacagtccagagactataacttaaaatgcaaaactataaaaaatcaaaaataaaatctatgtaatattgggtttggtgttgagttttaacacacaacatcaaacaccaattcatgaaaatattcataacacagaagactttataaaactcaattctctactgtgaaaaatcttattcagag---aaaaagacaagacagactgtgagaagacatttacaaaatacatatgtgatttgaaaaactgtattgaaaatacacaaataactctttaaaggaacactaaaaattttaaa--------------------------------------------------------------ctggctggacacagtggctcacacctgcagtcccagcactttaggaagccgaggcaggcagatca--tgaggtcaggagttcaaaaccagactgggtggtatagtaaaccccccccccaccatctctact-aaaatac-aaaaaattagccaggcaaggtggcatgcaattgtaatcccagctacttggtaggctgaggt-ggaaaattgcttgaacca-agggagcagagattgtactgagccaaaattctgccactgcacttcagcctgcgtgacagagtgaaactccatttcaaaataaaaaaaaaaaactaaaatgaaaaacccaattaaaactgggtaaatgtctgaacagacacccagccaaagaaaatatacagatag i calJac3.chr8 C 0 I 1261 e panTro4.chr4 121871739 0 + 193495092 I a score=80948.000000 s hg38.chr17_GL383563v3_alt 59430 954 + 375691 cacataatcacacaaaaggatgctcaatatatctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtacaactgtgggactctt-aaaaaagctcaacagtaacaattggaagttgaagaacaataggtacggccattcattaatggcagaatgcatgaatgggtacagccactttgggaaatagtttgacagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgcacccctaaattgtgtatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatatgagccactctactcatcatggccaaaacttgaagtaatcagaacgttcttcaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaataccattcaccaacagaaaggaatgaactgtcaatccatgaaaacaaatgaatgaatcttgcatctatgttgctaagtaaagggtggcagtatgaagatgctatacattatatgactccattcatataacattctggaaaaagcacaaccaaagagatgatagtcagatcagtgactgtctggggtggggatttgaagtattctgtatgctacttcagtagtggatatctgacactattcatttgataaaacccacagaattttaatgcacaaagaacaaatcacaatctacacaaattaaattatttaggatgtggaagtatctaaggacaaaatacagagtgaaaccaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctgagctggaaatgagtagaatccatagactaaaaacaaaacgtactatatacacgaacagtggactc-----tataaagttatttcccatagggataatagttaattttgaaactactataTCtgtaa s nomLeu3.chr20 33024 958 + 85365473 cacataatcacacaaaaggatgctcaatatatctcattaggagactgcaaattaaaataatgctgagatatcactgcacacctagtagaactgtgggactcttaaaaaaagctcaacaataacaactggagattgaagaacaataggtacggtcattcattgctggcagaatgcatgaatgggtacagccactttgggagatagtttggcagtttttcccaaagataaacaagtcttaccttacaatccaacaaatgcacccctaaattgtatatgtttagacagctgctttgaaaaattatgttcaaacaaaaactagcatgtaattatatacaagccactctactcataatggccaaaatttaaagtaatcagaacgttctacaatagctgaatgcataatcaatttgaagtacaaccatgcaatggaataccattcagcaacagaaaggaatgaactgtcaatccatgaaaagaaatgaacgaatcttggatgtatgttgctaagtaaagggtggcagtatgaagatgctttacattatatgactccattcatatgacattctggaaaaagcacaaccaaagacatgatcgtcagatcagtgcctctctggggttgggatttgaagtattccgtatggtactccagtagtggatatctgacactatgcatttgataaaacccatagaattttaatgcacaaagaacaaatcacaatctacacaaattaaattatttaggatgtggaagtatctaaggacaaaatacagactgcaaccaagaatctaactgtattaccaatgtatgttgcaagtggtgggccaaaggtgctgagctggaaatgcatagaatccatagactaaaaacaaaatgtactatacaca--aacagtggactctattttataaacttatttcccatagagataatagttaattttgaaaccactatatCtgtaa i nomLeu3.chr20 C 0 C 0 e calJac3.chr8 91746829 1261 - 128169293 I e panTro4.chr4 121871739 0 + 193495092 I a score=259609.000000 s hg38.chr17_GL383563v3_alt 60384 1190 + 375691 -aaagaaaaataaccatgattttcctctatactatcaacac-tccacttttaacagcaaattgtggggggtggggggtgtttcccataccaaccaatattccaactctctggaaaacaattgggtatcctgtaattcaactgtgacactgattacctggagttagtctacaccctacaggttaagggcttagtaacaccagactgtccacaacctcagatgccaatcacaagttgtgaatccccagtttacccaaacttctatatgacttggctagaaactaggcattcctacaccccctcttcaggtttgacaatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtgtaca-cccccaccccaaattcctattttgaaatgtaatccccaaagggatggtattcagaggtaaccgagaggtgatcggatcatgagagtgctgtcctcatgaatgaaaccagtgcccttataaaagcatctaggagcccgtttccccattctgccatgtcatgacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaacttaccaaattccaTATTTTAGgaatttttatggaagcttcatcatgtagacatgacggattattaactcaatttccagtcccttcacaccctcaaaggattgcatgttaagctaaaagttacaaccttcttatcatggcttggtctttctggtgaccat-ccccatcctgaaaccatccaggaacccacagagtgtccttattagaacagaagccattcctattatccaggagattccaagagatttaggaactctgcgtcaggaaccagggccaaagaccaaatattagaacacaaga-gctcctagcagccctactgttcaggaaattataatagttttacaagctctgtaccaggaactgcagacacagaccaaacatatatttcttattaagtcccaaCCTGGAATCTCGATCAAGAATGAATTCCTTCTTCCCAGTGGTACAAGGGATGaaatgaaaggcagatagtaggagccaggttcctcactattacagcgagaagttacagataaaaaat-agggaagcctagaatgatctcggtcataatgagtcagaatatatatataca s nomLeu3.chr20 33982 1192 + 85365473 -aaataaaaataaccatgattttcctctatactatcaacac-ttcacctttaacagcaaattgtggggggtggggggtgtttcccacaccaaccaattttccaaccctctggaaaacaattgggtgtcctataattcaactatgacactgattacctggagttagtatagaccctacaggttaagggcttagtaacaccagactgtccccaacctcagatgccaatgacaagtagtgaatccccagtttacccaaacttctatatgacttggctagaaactaggcattccgacaccccctcttcaggtttgataatttgctatgatggcttatggaact--aggaaatacttacttatgtttactagttattatggtctcaatgtgtatacaccccccaccccaaattcctattttgaaatgtaatccccaaagcgatggtattcagaggtaattgagaggtgatcagatcatgagggtgctgtcctcatgaatgaaaccagtgcccttataaaagcgtctaggggcccgtttccccattctgccatgtcaggacat-gctagaaggcactatctatgatagatgagccctcactagacatcaaatctgtcagccttgatctggaactttccggattccaTATTTTAGgaattcttatggaaacttcatcatgtagacatgatggattattaactcaatctccagtcccttcacaccctcaaaggactgcatgttaagttaaaagttacaagcttcgtatcatggcttggtctttctggggaccat-gcccatcctgaaaccatccaggaacccacagagtgtccttattagaacggaagccattcctattatccaggagattccaagggatttacgaactctgtgtcaggaaccagggccaaagaccaaatattagaacacaagatgctcctagcaccccttttgttcaggaaattataatagttttaggagctctgtaccaggaactgcagacagagaccaaacatatatttcttattaAGTCCCTACCTGGAATCTTGATCAAGAACGAATTCCTTGTTCCCaatggaacaagggatgaaataaatggcagatagtaggggccaggttcctcactcttagagtgagaagttacagataagaaat-ggggaagcctagaatgatctctgtgacaatgagtcactatatatatacata i nomLeu3.chr20 C 0 I 9 s calJac3.chr8 91748090 1175 - 128169293 aaagaacaaataaccctgattttcctctatactttcaacacttccacttctgacagc-aattttgagtggggggagatgtttccca---caaccaattttccaatgctctggacaataattgggtgtcctataatttcattatgacattaattagctggagttcatacagaccctacaggttaagggtttaggaatatcacactgtccccgacctcaggtgccaatcaaaagtagtgaatccccagtttatgcaaacttctgtatgacttggctagaaatgaggcactcctacacccttccctcaggtttgataattttgtatgatggcctatggaactcaggaaaacacttacccatgtttattagttactatggtctcaatgtgtgtata-cc----ctccaaattcctatgttaaaatgtaatcctcaaagggatggtattcagaggtaatagagaggtgattggatcatgagggtgctgccctcatcaatgaaaccagcacccttataaaagaatctagaagcttttttccccattctgccatgtcagaatatggctagaaggcactatctatgagggatgagccgtctctagacatcaaatctgtcagacttgatctgggacttttcagattccatattttaggaatttttatggaagcttcatcatatagacatgattgattattaactcaatctcccgtcccttcaaaccctcaaaggattgcatgtaaagctaagagttacaagcttcttattatggcttggtccttctggtggccatcccccatcctgaaaccatccaggaacccacagagggtcctt------acagaagacatttctatcactcaggagattccaag-gatttaggaactctgcttcaggaaccagggccaaagaccaaatattagaacacgagatgtttctagcacccctattgttcagtaaataataaaagttttaggagctctctattaggaactacagacagagaccaaac--atatttctcattaaattgcaaCCTGGAATATAGATCAAAAATGAATTCCTTGTTCCCAATGGACCAAGGCATGaaataaatggcaaacagtgggagccaggttcctcactgttagagtgagaaattacagataagaaatgggggaagcctagaatgatctctgtgctaatggatccgaatatatc------ i calJac3.chr8 I 1261 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=1821.000000 s hg38.chr17_GL383563v3_alt 61574 27 + 375691 acgtaagtataaactcacattcaggtt s calJac3.chr8 91749265 24 - 128169293 ---taagtataaactcacatttcggtt i calJac3.chr8 C 0 I 729 e nomLeu3.chr20 35174 9 + 85365473 I e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 61601 6515 + 375691 cctcattattacagtgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatagacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaatatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaaattcaggttcctcattattacagtgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatagacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaatatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatgtatatatacaacgtaagtataaactcacattcaggttcctcattattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagctaaaaaatagggaagcctagaatggtctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcccattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatgtatatatacaacgtaagtataaactcatattcaggttcctcattattacagcgagaagttagagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatggtctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatgtatatatacaacgtaagtataaactcacattcaggttcctcattattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagctaaaaaatagggaagcctagaatggtctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcccattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatgtatatatacaacgtaagtataaactcatattcaggttcctcattattagagcgagaagttagagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatggtctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtgagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagtgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatgtatatatacaacgtaagtataaactcacattcaggttcctcattattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatggtctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatacacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggtagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatataaacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatgcaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacacataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtgagtataaactcacattcaggctcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacataagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatgcaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcgagaagttacagataaaaaatagggaagcctagaatgatctcggtcataatgagtcagaatatatatatacaacgtaagtataaactcacattcaggttcctcactattacagcaagaagttacagataaaaaatagggaagcctagaatgatctctgtcataatgagtcagaatatatatataca e calJac3.chr8 91749289 729 - 128169293 I e nomLeu3.chr20 35174 9 + 85365473 I e panTro4.chr4 121871739 0 + 193495092 I a score=54107.000000 s hg38.chr17_GL383563v3_alt 68116 670 + 375691 acgtaagtataaactcacatttagcttaacatatacatagatggttccacatagaaacctttataattacgtgggtacatataagttagaagacacacatatatttctttgcactgtcagctgtaagtgtcatgatgcaatgaccacatttagtggccagatgtaagtttttcataccattctctaacaaaagaaatcagggctattagaagaaatagctgaaactaggactgggacagaaaatatatgagccagggtacttttgaagtaacagaaataaattataaaaaaaaa-acatgaaattatgtaaaaggagccagtggaaagagctaccaatggccacaggtatgaacaaagagcaacaaaatactgtacaattagataacaaccaaaagattaaagtaactatctgtggacccatactggtataaataaatgattaaacagatatgcaaatggactgaatagaaatctcttacacagaagaattccaaatacctgatatagac--agccatcaaggaggtggggctaactccccactcctttaagtatgagctctgcatgatgacttcctccaaaagcatacatacaatatagacatgggaaaaaagtaacttcacagtgaaaaacctgaaaacactgcctcacccaagtgataaaagttaacatt s nomLeu3.chr20 35183 672 + 85365473 atatatgtataaactcacatttagcttaatatatacacagatggtcccacatagaaacctttataattaagtgggtacatataagttagaagacgcacatatatttctttgcactgtcagctgtgagggtcatgatgcaatgagcacatttagtggccagatgtaagtttttcataccattctctaacaaaggaaatcaggggtctttgaagaaatggctgaaactaggactgggacagaaaatatacgagccagggtacttttgaagtaacagaaggaaactataaaaaaaaatacatgaaattatgtcaaaggagccagtggaaagaactcccaatggccacaggtataaacagacagcaacaaaacactgtagaattagataacaaccaaaacattaaagtgactatctgagtatccatactgctataaataaatgattaaatagatatgcaaatgggctgaatagaaatctcttatacagaagaattccaaatacctgatagacactcagccatcaaggaggtggggctaacttcccactcctt-aagtatgggctctgcatgatgacttcctccaaaagcgtacatacaatatagacatgggaaaaaaggaacttcacagtgaaaaacctgagaacactgcctcagccaggtgataaaagttaacatt i nomLeu3.chr20 I 9 C 0 e calJac3.chr8 91749289 729 - 128169293 I e panTro4.chr4 121871739 0 + 193495092 I a score=397111.000000 s hg38.chr17_GL383563v3_alt 68786 1887 + 375691 aatggtgataacacatcttgagagcatgAAGTGACTAGACTAGCACTtgcaaaccaaaaataaaattcaaagatctttcccacaacca----------------cctctccaccaggggacaccaaagttaacctggaagactggttcaggctatgatgggaaagaggtggtcagacatgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacac-aaccttaaatctgataagaaacatttacaatctattctctctgaagcctgctacctggaagcttcatctccatgataaaaccttggcctccttaaccccttatcataacccagacactcctttctattgatagtaagtctttcaacaaactgccaatcagaaaaattttaagtgtacctataacctggaagccccaccccaccctaatccactgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctacctccctaaaatgtatagaaccaacctgcaccccaacgaccttgggcacatgttctcagggtctcctgagggctgtgtcaagggccatggtcactcatatttggctcagaatacatctcttcaaatattttacagtc-tttgactctttttgtggacacactacacatctgctctgcttcccccaaacccctaaacccaggctgattatgagaaaaaccccaagtaaaccacaatggaggacattctacacaatacctgaccaatcctcctaacactgttccaggtcctcagaagtaaagtctgagagactgtcacagccaagaagagcctgacatgatgactaaatgtcctatgggatcctagataggatcctgggagagaaaaaggcagaactaagggaaaccaaataagatgtgagcttatttaataatatagtaatatccagtcattaagtatgacaagaaatgatgtaagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcacctgagatcaggagttcgagaccagcctggccaacgtggtgaaacctcatctctactaaaaatacaaaaattagccgggcacgatggcaggcgcctgtaataccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcatgccactgcactccagcctggttgaaaaaaaaaaaaaactggtctggaaaaaagaaaaaaaaaaaaagatgttaaacctatctgatacatgttgatatgttaaaaagaggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtatgaatctaaaactaatttaaaataaaacctctatttaaaaaTTGTAATTTTTTCAGATATCTGCTAAATTATTTGTACTAAAAATTAGTA---ATTGACAGTAACTACTCCTACTTTTAAAAATAAGAGCATTCATGATACTGCAAAGTAAATTATACAGACTAATATATACTTTCAAAGAAATGCCCCTTTTACATGTTTTATGTTAAGATAACATATATGTGTAAACATGG---TCATATCATTTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGGAAAAAAATTCACATTTTGGAGACTATTTCAATTTATGGCTGGACATTTTC-AAAGTATGACTTTGTG---AAAAAAAAA--------AAAGTTCAAATTGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGTCTTTATTTTGTTTCCCAGCATTCCTTTCAGCTACGATACAACAGAAGCAAATATTTGCCACTGG-AAAAAATATTCAAAga s nomLeu3.chr20 35855 1866 + 85365473 aatggtgataacacatcctgagagcatgaagtgactagaatagcacttgcaaaccaaaaatacaattcaaaggtccttcccacaacca----------------tctctccaccaggggacaccaacgttaacctggaagactggttcaggctatgaagggaaagaggtggtcagagatgcctcattatgccctcctcccttttggaattcaggaaaagccaatcagcatttaacatcaacag-gaccttaaatctgataagaaacatttacaatctattctctctaaagcctgctacctggaagcttcatctccacgataaaaccttggtctccata-ccccttatcataacccagacacacctttctattgataataactctttcaacaaactgccaatcagaagaattttaaatgtacctataacctggaagccctaccccaccctaatccattgggttgtcccacctttctggaccgaaccaatatatatcttaaatacacttgattgatgtctcctgtctccctaaaatgtatagaaccaacctgcaccccaaacaccttggacacatgttctcagggtctcctgagggctgtgtcatgggccatggtcactcatatttggctcagaatacatctcttcaaatattttacagac-tttgactctttttgCGGACAcactacacatctgatctgcttcccccaaaccactaaacccagtctgattatgagaaaaaccccaagtaaaccacaatggagaacattctacacaatacctgaccaatcctcctaacactgctccacatcctcagaagtaaagtctgagagactgtcacagccaagaagagcctcaaatgatgactaaatgtcgtatgggatcctagataggatcctgggagagaaaaaggaagaactaagggaaaccaagtaagatgtgagcttatttaataatatagtaacatccagtcattaactatgacaacaaatgatataagatgttggtcaggagtggtggctcatgcctgtaatcccagcactttgggaggctaaggcgggcagatcacctgagatcaggagttcaagaccagcctggccaacatggtgaaacctcatctctactaaaaatacaaaaattagacgggcgtgatggcaggcgtctgcaataccagctactcaggaggctgaggcaggagaatcgctggaacctgggaggcggaggttgccgtgagccgagatcgcaccactgcactccagcctgggtgagac----------tctgtctg---------aaaaaaaaaaaagatgttaaacatatctgatacatattgatatgttaaaaagaggggaaactaggttgcgtctacatgggaaatctgcattttcttcccaatttctgtgtgaatctataactaatttaaaataaaacctttatttaaaaaTTGTAATTTTTTCAGATTTCTGCTAA-TTATTTGTACTAAAAATTAGTAGTAATTGACACTAACTACTGCTACTTTTAAAAATAAGAGCATTCAAGATACTGCAAAGTAAATTATGCAGACTAATACATAATTTCAAAGAAATGCCCCTTTAACATGTTTTATGTTAAGATAACACATACGTGTAAACATAT---TCATATCATTTTTCTTATGGTGTAGTTCACTCTCTAAGAAAGCTGGTCATCTTAGAACCAGGG-AAAAAATTCACATTTTGGAGACTATTTCAATTTACGGCTGGACGTTTTC-AAAGTATGACTTCGTGAAAAAAAAAAAA--------AAAGTTCAAATTGATTCATTGTGACTGGATCACTTATTCTAATGAA-TGCTTGTC-----TTTGTTTCCCAGCATTCCTTTCAGCCACGATACAACAGAAGCAAATATTTGCCACTGG-AAAAAATATTCAAAga i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91750018 1842 - 128169293 aaTGGTGATAACACATCTTGAGAGCATGAATTAACTAGAATAGCACTtgaaaatcaaaaataaaattcaaaggcccttcccccaaccatctgtataaactccctcctcttcaccagaggacaccaaagttaacctggaagtctggtttaggccatgacgggaaagaggtggtcagacctgcctcattatgccctcctcccttttggaattcaggaaaagatgattagcatttaacatcaacacagaccttaaatctggtaagtaatatttataatctattctctctgaagcctgctaccttgaggcttcatctgcctgataaaattttggtctccataaccccttatcataacccagacactcctttccattgataataattctttcaattaatttccaatcagaaaatgtttcaaattacctataacctaaaagttccacttcaccctaacccactgggttgtcccacctttctggaccaaaccaatatatagcttaaatacatttgattgatgtcttctatctccctaatatgtatagaaccaagttgtatcc-----------------------cagggtctcctgagggctgtgtcataggacatggtcactcatatttggctcagattacatctcttcaaatgttttacagacttttaactctttttgtggacacactacacatctgatctacttccccaaaacccataaccccagtctaactatgagaaaaacatcaagtaaaccaaaatggagg-------acacaatacctaaccaatcctcctaacactgtttcagggcctcagaagaaaagtctgagagactctcacagcaaggaatagccagacatgacaact-aatgttctcttggatcccagctagaatcctgggacaaaaaaaggcagaactaagagaaaccaaataaaatgtgagcttatttaataatatgttaatatccagtcattaactgtg---aaaaactatgtaagatgttggcca------gttgctcatgcctgcaatcccagcactttgggaggccgaggcaggcaaattacctgaggtcaggagttggagaccaacctgcccaacatgatgaaacctcatctctactaaaaatacaaaaattagccaggcatgatggcaggtgcctgtaatcctagcctctcaggaggctggggcaggagaatcacttgaacatggaagg-ggaggatgcagtgagctgagatcatgccactgtactacagcctgggtgacag--agggagactcagtctc---------aaaaaaaaagttaat----aacataactgatacatgttcatatgttaataagaagggaaacc-ggttggaaatacatgggaaatctgcattatcttcccaattttagtgtgaatccaaaactaacttaaaataaaatctttattaaaaacttgt-attttttaaaGTATCTGC----TTATTTGTACT----ATTAGTAGAAATTGACACTAACTACTCCGACTTTTTAAAGTAAGAGCATTCATGCTA--------TAAATTATGCAGACTAATACATAATTTCAAAGAAATGCCTCTTT-ACATGCTTTATGTTAAAATAATACATATGTGTAAACATGTTTATTATATCTTTTCCTTTGTGGTATGGTTCACTCTCTAAGAAAGCTGGTCACCTTAGAACCAGGG-AAAATATTTACATTTTGGACACTATTTCAATTGATCGGTGAACATTTTCAAAAGGATGACTTTGCAGAAAAAAAAAAAAACCATTCAAATAGCAAATTGATTAATTGTGACTGGATCACTTATTCTAATGAATTACTTGTC-------TGTTTCTCAGCATTCCTTTTAGCTACAATACAACAGAAGCAAATATTTGCCACTGGAAAAAAATATTCAGAGA i calJac3.chr8 I 729 I 748 e panTro4.chr4 121871739 0 + 193495092 I a score=257.000000 s hg38.chr17_GL383563v3_alt 70673 5 + 375691 cactc s nomLeu3.chr20 37721 5 + 85365473 cactg i nomLeu3.chr20 C 0 C 0 e calJac3.chr8 91751860 748 - 128169293 I e panTro4.chr4 121871739 0 + 193495092 I a score=68335.000000 s hg38.chr17_GL383563v3_alt 70678 290 + 375691 ttaggttaatctatagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattacttagctaagc-gggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaagataaaaattttcttttctttctcaGTATTAAATATGCTGTCACAGTAGAAGAAAGCTTTACTGACTTCTTAAATGATGTGTTGAGACCGGAAACCTAAAATGATAGTTACTGAGAATAGTGCTAATGCCCTAAG s nomLeu3.chr20 37726 291 + 85365473 ttaggttaatctacagctgatgacagtcagtctagtctacatagcaagcagcttcaagatatgattacttagctaagcggggaaatgggacgtgactgctgcctcattcccacgcctctctggacctgataatttagaggaagctcacattcgcaaaataaaaagtttctttgctttctcaGTATTAAATATGCTGTCACAATAGAAGAAAGCTTTACTGACTTCTtaaatgatgtgttgagaccggaaacctaaaatgatagttactgagaatagtgctaatgccctaag i nomLeu3.chr20 C 0 C 0 s calJac3.chr8 91752608 291 - 128169293 ttaggttaatttatagctgatgtcagtcagtctagtctacatagcaagcagcttcgagagatgactacacagctaagaggggaaattggatgtgactgctgcctcattcccatgcctctctggacctgataatttaaagaaagctcacgttcatcagataaaacatttactttcttTCTCCATATTGAATATGTTGTCACAATAAAAGAAAGCTTTATTGATTTCTGAaatgatatgttgagaccggaaacccaaagtaatagtgatttagagtagtgctgatgccctaag i calJac3.chr8 I 748 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 70968 540 + 375691 ACTGGAACCCTAAAATGATAGTCACTGAGAATACTGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTTACTGAGAATAGTGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTTACTGAGAATACTGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTTACTGAGAATAGTGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTTACTGAGAATAGTGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTCACTGAGAATACCGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTCACTGAGAATACTGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTCACTGAGAATAGTGCTAATGCCCTAAGACCGGAACCCTAAAATGATAGTCACTGAGAATACTGCtaatgccctaagaccggaaccctaaaatgatagttactgagaatactgctaatgccctaagACCGGAACCCTAAAATGATAGTTACTGAGAATACCGCTAATGCCCTAAGG e calJac3.chr8 91752899 0 - 128169293 C e nomLeu3.chr20 38017 0 + 85365473 C e panTro4.chr4 121871739 0 + 193495092 I a score=197127.000000 s hg38.chr17_GL383563v3_alt 71508 1029 + 375691 TTTTAGTCACACCCTCACCTAGGCAGGAACCCAATCAAAAGGGGAGAACtgtggaacaaactacgggaggtcattgtttcggtcaccactcccgcactaggccacactgagcaggcaaaaccagaatggagacactcacgctgaatgacacacaacgaagctgaaactctaaggaagtagatagatcccaaaagagctccctttttccctgaagagattccagtctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctattt--------ccgccttacacaacacagtgttctgctattgcccagagggcactGAG-------ACCAAATAAAACTTGAAAATGCCACACTGAAAGCAAATaagtcctaataactcaacttacaacgataacaaagagtgacaccaatgcccaaagttttgatcaatatctcaaaattgagaggctgaccaaaagggaggaattcttacatcaaacaacatttgggCTCTGGAAGCCTCCCGAGGAGTCCTTGTAAAGAGT-----CGCggccgggcgccgtggctcacgcctgtaatcccggcactttgggaggccgagacgggtggctcat--gaggtcaggaaatcgagtccatcatggcttacaaggtgaaacccagtctctact--------------------------------------------aaaaaaaaaaaatacaaa----aaaattagcagggcttggtggcggcagcctgcagtcccagctacttgggaggccgggacaggagaatggcatgaacccgggaggcggagcttgctgtgagctgagatcgcgccactgcactccagcctgggcgac-agagcgagactccgcctcaaaaaagaaaaaagaagaagaac-----aagaagaatcgca-acctaatttagtatagaaacaaactgaaaatctgacttgggaatgtatcatggtaacaaatagcggcggttcagccaatcacatcagccgagtgtcagtcaatggccggcagccagctgttc s nomLeu3.chr20 38017 1032 + 85365473 ttttagtcacaccctcacctaggtaagaacctaaccaaaaggcgagaaCtgttgaacaaattacaggaggtcactgttttggtcagaactcctgcattaggccacactgggcaggccaaaacagaatggagacactcatgctgaatgacacacaacgaagctgaaactttaaggaagtagatagatcccaaaagagctccctttttccctgaagagattccaatctacctgagtcagcataaagaagtcccctctgctttaattcttaccaaaacaagtaacttgaagtaatctgatattaacaaatcagttgttattttctattgctctgttt--------ccgccttaaacaacacagtgttctgctattgcccagaaggcactAAG-------ACCAAATAAAACTTGTAAATGCCACACTGAAAGCAAATAAGTCCTAATAACTCAATTTACAATAATAACAAACAGTGACACCAATGCCCAAAGTTTTGATCAATATCTAAAAATTGAGAAGCTGGCCAAAAGGGAGGAATTCTTACATCAAACTACATTTGGGCTTTAGAAGCATCCCAAAGAGTCCTTGTAAAGAAT-----CGCggccgggtgccgtggctcacgcctgtaatcctggcactttgggaggccaagacgggtggatcac--gaggtcaggaaatcgagaccatccaggcttacaaggtgaaacccagtctatact----------------------------------------------aaaaaaaaaatacaaa----acaattggccggacgtggtggcggcagcctgtagtcccagctactcgggaggccggggcaggagaatggcatgaacccgggaggcggagcttgcagtgagctgaaatcgcgccactgcactccagcatgggccac-agagcgagactccacctcaaaaaaaaaaaaaaaaaaaaaaaaGGAGAAGAAgaatcgca-acctactttagtatacaaacaaactgaaaatctgacttgggaatgtatcattgtaacaaatagcggaggttcagccaatcatatcagccgagtgtcagccaatggcaggcagccagctgttc i nomLeu3.chr20 C 0 I 2094 s calJac3.chr8 91752899 1075 - 128169293 ttttgctcacactctcacctcggtgagaacctaaccaaagatggag-aCtgttaaacaaattatgggaagacactgttttggtctgaactcctgcaatgggccactttgaacaggcccaaccacaatggagacagtcatgctgaatgccacacaaccaagctgaaactttacggaagcagatagattgcaaaagcgatcactttttccctgaagagattccagtctaccagagttagcataaggaagtcccctcggctttaattctaaccaaaacaagtaac----------ctgatattaaccaatcagttgttattttccattgttctgtttctttgttcccacctt-----acatagtattctgctattgcccagggggcgctAAGAACAACAACAAAAAAAAACTTGTAAATGCCAAACTGAAAACAAAAACATccaaataacccaatttacaatggtagcaaagagtgacatcaatgctcagagctttggtaaatatctcaaaattgagaggctga-ggaaggggaagaatTTTTATATCAAACTACATTTGGGCTTTAGAAGCCTCCAAAGGAGTCATTGTAAAGAACTACAACGTggccaggagtgttggctcatgcctgtaatccaggcactttaggaggctgaggcagaaggatcacctgagttcggaggtttgggaccagcctgaccaacatggggaaagcccgactctactgaaaatacaaaattatataagctgacagacattgtaaggaaaaaaaaaagaaaaaaaacaaaaaacaaaattagtcgaatgtggtggcacatgcctgtaatcccacctacttggaaggctcaggcaggagaatcgcttgaacctgggaggcagagttagtgatgagctgagattgcactattgcactcaagcctgggcaataagagc--------------aaaaaacaaaacgaaacaaaacaaaaaACAAAACactgcattcctaatttagtatataaagcaactgaaaacctgacttgggaatttatcattgtaacaaagagcagaggttcagccaatcacatcagcggagtgtcaaccaatggcaggcagccagctgttc i calJac3.chr8 C 0 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=298925.000000 s hg38.chr17_GL383563v3_alt 72537 1346 + 375691 aaaacaagttccaagaaggcaaatccgggctgtaaccaggtctgtaaccaatccagccacctctatacctcacttctgttttctgtatgtcacctt-tttcctctggctataaatataacccgcacatgttgtgtggcagatcattctgaaccatttttggtctggactgctgcctgattctagaaccacaaaaaaaagccaattaagatctgcaaacccacatttgttgtaattctgtattttaacaGTTGTGCCCTACAAAAGACATTAAGCTGAAATTAATTAAAAATCATTTACGGTCATGATTAGGTCataaaaaattgtcaaacataacaattcttcaaaaaa-agctaaaaagtatattttaaaaatattgttgatggaaaaaagagtgcaaaagtagataggaaaattatgtacaaaactaaaaacagaggagaaattaaaagtcaaat---------aattacatcaaactggaaacc-tagaaaaaatgggtgatttcctagtaaaaatacacattaacaaaatgggccctgaaataaggcaactatgaatataccaattagcatagaaaagctaagaaaggtccttaaagatctcccagtggaaaaaggccccaggaccatctgggtccatagcttagtGTAAGCTGAC-TTAACTAAATGTGATTTTACACTCGTGCATTGcatacatatgatggtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacgcattacCTTTTCTCTGTTCTGATACCAtgaaaggaaaataaatctcaggacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaggcaaacctgcc-ctcattctattcctaactaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttccttttggacaaaggacagacagcactcaaagtcatcc--------ctcacctgagacagatgcatatctgattgcttcctctgccctattatttatgtaaaaatgcagattcattgagccagactaaattgtgtat--tcagtggaaggctgatgaaggattcaaaagaatgcaaccttttgtctctaacctacttctgacctggaagcacccccacttcctgcttccagttgtcccgccttactgggccaaatgactgtacatcttacacgtctcatgtatccctaaaatgtacaaaagcaagctctaccctggccaccttggacacacgtcgtcaggacctcctgaggc----tgtgtcatggtcgtgtccttaatctgggcaaaataagctttctaaattga s nomLeu3.chr20 41143 1342 + 85365473 aaaacaagttccaagaaggcaaatctgggctgtaaccaggtctgtaaccaatccagccatctccatacctcacttctgttttctgtatgtcacttt-ttttctctggctataaacataac----acatgttgtgtggcagatcattctgaaccatttttggtctggattgctgcctgattctagaaccacaaaaaaaagccaattaagatctgcaaacccacatttgttgtaattttgtattttaacaGTTGTGCCCTGCAAAAGACATTAAGCTGAAATTAATTAAAAATCATTTACGGTCATGATTAGGTCATAAAAAATTGTCAAACATAACAATTCTTCAAAAAA-AGCTAAAAAGTATATTTTTAAAATATTGTTGATGGAAAAATGAGTGCAAAAGTAGATAGGAAAACTATGTACAAAACTAAAAACAGAGGAGAAATTAAAAGTCAAAT---------AATtgcatcaaactggaaacc-tagaaaaaatgggtgatttcctagtaaaaatacacattaacaaaatgggcactgaagtaaggcaactatgaatagaccaattagcatagaaaagctcggaaaggtccttaaagatctcccagtggaaaaaggccccaggaccatctgggtccatagcTTAGTGTAAGCTGAC-TTAACTAAATGTGAGTTTACACTCGTGCattgcatacatctgatagtggtcccatgagataaaaatggagctgaaaaattccttcctagccatcttgtcataagctcatggctcaacacattaccttttatgtgttttgataccatgaaaggaaaataaatctcaggacccccaaatcaccaagccaagggaaaagtcaagctgggagctatgtcaggcaaacttgcc-ctcattctattcctaagtaagatagctacaaagataaaaagctacatacctcactcacaatttgcccacaaagaatttcctttaggacaaaggacagacagaatgcaaagtcatcc--------ctcacctgagaccaatgcatatctgattgcttcctctgccctattgtttatgtaaaaatgcagattcattgagccggactaaattgtgtat--tcagtggaaggctgatcaaggattcaaaagaatgcaaccttttgtctctaacctacttctggcctggaagcacccccacttcctgcttccagttgtcctgccttactggaccaaatgactgtacatcttacacgtctcatgtatccctaaaacgtataaaagcaagctctaccctggccaccttgggcacatgttgtcaggacctcctgaggc----tgtgtcatgggcgtgtccttaatcttggcaaaataagctttctaaattga i nomLeu3.chr20 I 2094 C 0 s calJac3.chr8 91753974 1340 - 128169293 aaaacaggttccttgaagagaaatgc-ggctgtaaccaactctttaaccaatccagccatctctatacctcacttctgttttctgtatgtcactttcctttctctggctataaatataccctgcacatgtcgtgtggcagagcattctgaaccatttttggtctggacagctgcccgattctacaaccacaaacgaaagccaattaagatttgtaaacctacatttgttgtaattatgtcttttaacaGTTGGATCCTGCAAAAGACATTAAGCTAAAATTAATAAAAAATCATTTAAGGTCATAATTAGGTCATAAGAAATTGTCA-----AACGATTCTTCAAAAAACAGCTAAAAAGTGTATTTTAAAAATATTGTTGAT---AAAAAAAGTACAAAAGTAGATAGAAAAATTATGGACAAAACTAAAAAC--AGGAGAAATTAAAAGTAAAATAAGAGAACCAATTGCATCaaactgaaaaccttaaaaaaaatggacgatttcctagtaaaaatacacattaacaaaatgggcaatgaagtaaggcaactaccaacagaacaattagaatagaaaagcttggaaaggtccttaaagatctcccagtagaaaagag-ccaaggaccatctgggttcatagctTAGTGTAAGCTGACTTTAACTAAATGTGATTTTATAGGCATGCatcacgtaca--tgatagtggttccatgagataataatgtagctgaaaaatttcttcctagccatcttgtcataagctcatggctcaactcattacctgatctaagttttgataccttaaaaggaaaataaatctcaaaacccccaaatcactaagccaagggaaaagtcaagctgggagctatgtcaagcaaatctgcctctcattctattactaaataagagcgccacaaagataaaaatctacatacctccctcacaatttgtccacaagtaatttccttgtggacaaaaaacaaacagaactc--agtcatccctctgaggctcactggagacaaatgtatatttaattgattcctctgtcctattgtttatgtaaaaatgaagattcactaagccagactaaattgtgtattctcggtggaaggctgatcaagggttcaaaagaatgcaaccttttgtgtcttatctacttctgacttggaagcaccaccacttcctgcttccagtggtcacaccttactggaccaaacaactacacatattaattg----atgtgt--------------aaaacaagcactacactgaccaccatggacatatgttgtcaggacctcctgaggcggtgtgtgtaatgggcgtgtccttaaccttggcaaaatacactttctaaattga i calJac3.chr8 C 0 N 0 e panTro4.chr4 121871739 0 + 193495092 I a score=459.000000 s hg38.chr17_GL383563v3_alt 73883 7 + 375691 cagagac s nomLeu3.chr20 42485 7 + 85365473 ctgagac i nomLeu3.chr20 C 0 N 0 e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 73890 218 + 375691 gcggcgcgccggcgcaggcgcacagaggcgcggcgcgcgggcgccggcgcacagtggcgcgtcccctggggggcggggggaggcgcggcgcaggcgcagagacgcacgtcgttaggctgtgggtttggggggaggtgggtggtgcagacgcagagtcacgcgccaccgggatgagagcgcgggggtggagcgttgtaggcgcacagactcacgtcccc e panTro4.chr4 121871739 0 + 193495092 I a score=143203.000000 s hg38.chr17_GL383563v3_alt 74108 1990 + 375691 gggggcgcggcgcagagacgggttgaacctcagtaatccaaaaagccgggctcgggcgccccctgcttgcagccgggcactacaggacccgcttgcccgcggtgctgtcccagtgcgccccctgctagcgactagggcaactgcagggccctcttgcttacagtggtggccagcgccccctgctggcgccggggcactgcagggctctcttgctcgcaatatagtggcggcacgccgcctgcaggcagctagggacgttgcagggccctcttgctcacagtgtagtggccgcacgcccgcctgctggcagatggggacactgccaggccctcttgcttgcagtgtagtcggggcacgccctcttctggccgctgggggcacgacaggatcctcttgctcacagtgtagtggcagcacgacccctgctggcaaccagggcactgcatggtcctcttgctcatggtgtggtgcccgtacgccgcctgctggcagctgaggacactgcagggccctcttgctcacagtgtagtcgtcgtacgccccctgctggcagctggggacactgccggaccctattgctgtcggtgtcgtggcagcacgccacctgcgggcagatggggactaggcagggcactcttggtcccggt-------------------gtgacggcctcctgcaccact-aaagtcagagcgccagttattaagccccatcagttctgtaaattcaaactgaaacggagctattactggggagagctgatgtcccagttcttgtttaacttggaagaaacattttcaccaagaggcagtacaaagatggcagataacttcattgaaaagaaacacagtgtaaagagtttattgtagaaaaatagggaggagtgggctgagcgtgcattaaaacagcctaagagtcctgtgcagggaattttattttggatttcttcacattcctgcctctgtctcaagtctccacctgttttctttgtctggttttcctgctactgccttagctccccaacttgccccacttaggcttgtgggacctcctcactgttggttgaggtacatgtgtggtgatcaatacgaatccactctggcagcagcctccatcccgccatcccaggcacgctgacagcgatcacgtttgtacctactgcgcctgcctcttttgaatgtccttctctgccctaatctgtacttatggtgccaggtttctcttaagaatgtcccctttggccttatcagcatgtagctagcaatattctgacatttttattgcagagtgaatgat---tggggcatcttcagaggagttctagagtgtttctttctgcataggtacctcttttccctcctacccacaattgacaagtgcccatccactccagcactagagatgctactaatatgtgaatttttggtggtccctccaggtgagccttcccagactttcccttttccaggaggccccct-cctgttcatgtctagctacctatctactctaacaAAGCCCACTATCCTGTgtctttcccaaaaatagtgagggaacgattaattggaaaccataagaaatgatatggatatagacgaaaactttacaacttacacaaataatcactcaaaatcatccttacactaaaaatgcaaaactatacaatttctagaagaaacaatagaagaaaagctatctgcctttgggtttggtaatgaattttaacaaatgacacaaaaggtagatatacacaaaagaagtgacagtgtggatttcttaatatttaaagtttatactctggaagagaccttgttaagagaacaaaaagacaagccacatattgaagaaaatatttgcaaaatacacatctgagaaagaatttgtcttcaaaatatataaaaaattattaaaactaaacaataagttaaacagcccaactaaaaatgcacacacatctgaacagacacctcaccaaagaagatctacagatggcaagtaaacacattgaaac s ponAbe2.chrUn 9505225 1905 + 72422247 gggggcgcggcgcagagacgggcgggacctcggtaatctgagcagtccggcccgggcgccccctgctggcatctgggcactacagtgcctgcttgctaacggtgctgtgccagttcgcctcctgctggcgactagggcaactgcagggccgtcttgcttacaggggtgcccagctgcccctgctggcctcgggacactgcagggccctcttgctcactgtagagtggtggcacgccgcctgctggcagctgaggacattgcagggacctcttgctcacagtgtagtggcagcaagcccgcctgctggcagctggggacactgccgggccctcttgctccacgtgtagtggcagcacgcc----------------gggc----------cctcttcctccaagtgtagtgg---------------tggc-----------------------------------tggttccc---------ctgctggcagctggggacactgcagggcccttctgctcacagtgtagtcgtcgtaccccccctgctggcagctggggacactgccgggccctcttgctggcagtgtcgtggcagcacgccacctgcaggcagatggggactatacagggcccttttgctcccggttgacccctggcgctccctactggccccctcttgcaccacttaaagtcagaacgccagttattaagcgccatcggttctggaaattcaaactgaaatggagctattactggggagagctgatgtcccagttcttatgtaacttgaaagaacgattttcaccaagaggcagtacaaagatggcagataacttcattgaaaa---atacagcgtaaagagcttactgtagaaaaatagggaggagtgggatgatcgcgcaggaaaacagcctaagagtcctgtgcatggaattttattttggacttcttcacattcctgcctctgtctcaagtctccgcctgtttt----gtctggttttcctgctactgcctcaggtccccgactttccccacttaggcttgtgggaccgcctcactgttggttgaggcacatgtgtggtgatcaatctgaatccactctggcaccagcctccttcccgccatcccaggcaggctgacagcagtcacgtttgtacctactgcgcctgcctcttttgaatgtccttctctgctctaatctgtacttatggtgccaggattctcttaagaatgtcccctttgtccttatcggcatgtagccagcaatattctgacatttttattgcacagtgaatgatgattggggcatcctaagaggagttctagggtgtttctttctgcataggtatctcttctccctcctactcacaATTGACAAGTGCCCATCCACTCCAGCACTAGAGATGCTActaatatgtgaatttttggtgctccctccaggtgagccttcccagactttcccttttccaggaactccccttcctgttcatgtctagctatctatctactctaacaGAGCCCACTATCCTGTgtctttcccaaaaacaatgagggaatgattaattggaaaccataggaaatgatatgcatgtagatggaaactttacaacttacacaaataatcactcaaaatcatccttaca----------------atgcaatgtctaaaagaaactatagaagaaaagctatgtgcctttgggtttggtaatgaattttaacaaatgacacaaaaggttggtatacacagaacaaatgacaatgtggatttcttaatatttaaagtttatactctggaaaagaccttgttaagagaacaaaaagacaagccacatattgaagaaaatatttgcaaaatacacatctgagaaagaatttgtcttccaaatacataaaaa-ttcttaaaactaaacaataagttaaacagcccaactaaaaatacacacacacctgaacagacacctcaccaaagaagatctccagatgacaagtaaacatacaaaaag i ponAbe2.chrUn N 0 I 15 e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 76098 11 + 375691 cacaatgtggt e ponAbe2.chrUn 9507130 15 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=11746.000000 s hg38.chr17_GL383563v3_alt 76109 146 + 375691 tacaattgaaaaccacaatgagatagcacagctggtctatatctgttagaattgctaaactcttttaaaaatgacaaattgctgaaggaaaaacaagaactcttttcattgccagtggaaCACAGCATATAAGACCAAAATACGCC s ponAbe2.chrUn 9507145 144 + 72422247 gagaattgaaagccacaatgagatagcacagctggtctatatctggtagaattgctaaactctt--aaaaatgacaaattcctggaggaaaaacaagaactcttttcattgccagtggaaCACAGCGTATAAGACCAAAATATGCC i ponAbe2.chrUn I 15 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=573.000000 s hg38.chr17_GL383563v3_alt 76255 2 + 375691 AC s ponAbe2.chrUn 9507289 2 + 72422247 AC i ponAbe2.chrUn C 0 C 0 s papAnu2.chr14 13765 2 + 123829720 ac i papAnu2.chr14 N 0 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=3925.000000 s hg38.chr17_GL383563v3_alt 76257 12 + 375691 CCCAAAAcctaa s ponAbe2.chrUn 9507291 12 + 72422247 CCCAAAAcctaa i ponAbe2.chrUn C 0 C 0 s macFas5.chr14 3554 12 + 130733371 ccctacccctac i macFas5.chr14 N 0 C 0 s papAnu2.chr14 13767 12 + 123829720 ccctaaccctaa i papAnu2.chr14 C 0 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=19261.000000 s hg38.chr17_GL383563v3_alt 76269 143 + 375691 ccctaaccctaacccc-----taacccctaacc------------aaccctaaccctaaccctaaccctaacccctaacc---cctaaccctaaccctaaccctaaccctaacccta---acccctaacc---cctaaccctaac------------------------------------cctaaccctaaccctaacccta----ac s macFas5.chr14 3566 201 + 130733371 ccctaaccctgaccctgaccctgaccctgacccagacctcaccctgaccctgaccttacccctaaccctaaccctgaccctgaccttaccccaaccctgaccctgaccttaccccta----accctaac----cctgaccctgacccaacccgaccctgacctgacctgaacctgacccgacccgaccctgacccgaacccgacccgat i macFas5.chr14 C 0 C 0 s papAnu2.chr14 13779 165 + 123829720 ccctgaccctgacctt-accccagccctgaccc-----------tgaccctgaccttacccctaaccctaaccctgaccctgaccttacccgaaccctgaccctgaccctgacccaacccgaccctgacctgacctgaacctgac--------------------------------ccgacccgaccctgacccgaacccgacccgat i papAnu2.chr14 C 0 C 0 e ponAbe2.chrUn 9507303 0 + 72422247 C e panTro4.chr4 121871739 0 + 193495092 I a score=1326442.000000 s hg38.chr17_GL383563v3_alt 76412 2717 + 375691 ccctacccctaac-----ccctaaccctTACCGGTGACCCTACTGTATCCCTGACTCCTAACCAACATTGATCCCTAACCCTAAACCCCTTACTGTAACTATAATCTTCATCCCA-CCCTATCCCTAGCCTTAGTGCCATCCCCCAGGCTTTTTCCAGGATGGGATTTTATGTGATTGTTTCGAATAGGTGGAAATCTCTGCTCATTTAGGAGTCGTTCAATGTAACAAGGATCTTGGTCTTCACAGAGACCCTAAACGCGTGTGGCCCAGGGTCATGTGGATGCCATCAGCCACTAGGTGGCAGCAGGGGCCCTTTGGATTTGAACAATGCAGCTCAGTCAGAGGGCTGGACTGGGACACCCCTACTCATGGTCTCTCTTGGCATGGTTTTGTTTGGTGACTCCAGGTGTCCCAACCTCCTGTGTCCATTGTAATATGTCCTGGGACCATCTCCCCCAGGGCCTTCAACCTCTCCTTGCTATCCTGGCTACTGATGGAAGATGTACCTCAAGCCTGTCCCATTCCTCACTTCCTGCTGAGACCTGGCCCCAACATGGCCAGCTCTATGTTCCTCAGACCCTCTCAGGCCACCTTCTCTCTTCTAGGCACTGTCACTGGGCTTCTCCCCACCCCATAGATCCACAGCCCCCAGGTAGTCCTACAGCTGTGTCCACTCGTGCAGCCTGCACCCCCTTCCCCTACTCGGCCA-CCCCATCTGAGTAGTAAGGGGC-CCCTGCCTGATTGGAGACCCCCAGATGCAGACCCAGATCACACAGCACACTGATAAGAGGAGGGATTCCCACCTTAAAAGAAAGGCGTGGGACCAACCCCAGATCCCACCACTCTCGGCCTCAAGGGCAGGCATGACTAGAGGCCCTTGGTGGCCAGGACCCACTGCCTTCTTCACCGATCAGTTGGCATGGCCT--CTCACCAGTGTTCCCTCCTAACACACCTGTTCTCTCTCTCACACACCCTAAAGCCGCTTGCCAACCACCTGTCACACAGCCACTCCATGCCTGTTGCTGCTTGGCACCCACTGGGGGCCAGGGATGTGAACAAACCTCATCTAAGCTGGCTGCCGGGTCCTAATGGGCAGGTCCGGTCCGCCCTCTAGGAGAGGTGCTGTCCGGTGAGGCATAAAATCCCGGGATTCTGGCTGGAGGCAGCTCCTGAGACTGCCGGCATGAAGGGGAGCCGTGCCCTCCTGCTGGTGGCCCTCACCCTGTTCTGCATCTGCCGTGAGTCTGTGCCACTGGGGTTTCCAGAACATTCAGG---GGCGGGGGGGAGT-GGGGGGTACCTGAGAAGGTAAAATCCTGGCATCGGGCCTCTGCAGTGAACACTCCACCTGCTTCTGTCACAGAAGTGGGCAAGGACCCTGCAGAACCCGCgcccaccctactccaccccaaccaaggacaaagcccagctgacccaacaccagcccagtgtctcctaccccagcccagtccagccTGACCTGACCCTTCAAGCCTCTGGTCATAATAGCCTCTCATCAGGGGAAATTTCCCCCACACCAGGAGCTTAACTTTCCTTCCCTGGTGATCCCAGGGAATGCTGAGTGGAAATTGGAGCAGCTAAGATTAAGGGGGATGTGGAGGGGTCTTCGGGCAAGGTGGAGTTGGAGGTGTTGTGGAGGAAGCCCTGGGGAGGAGAGGTGAGCATTGAAGGGGAAGGTCTGGAGACCATGGAGGTTAGAGCCCTGGGGCAGGTCCAGGGCTGTGGTTGCACCAGAGTCACCCTGTCCTGTCCTGGCATCATCTCGCTCGTGATGCAGGGATGGCCACGGGGGAGGACAACGATGAGTTTTTCATGGACTTCCTGCAAACACTACTGGTGGGGACCCCAGAGGAGCTCTATGAGGGGACCTTGGGCAAGTACAATGTCAACGAAGATGCCAAGGCAGCAATGACTGAACTCAAGTCCTGCAGAGATGGCCTGCAGCCAATGCACAAGGCGGAGCTGGTCAAGCTGCTGGTATGAGGGC--GGCGGGCACCCCATTTTCTAAAGATCTGCAGCCTTACCAAGAccacccaacacagcacccacacagcctaccccacccacagacatc-caccacccacAGACATTGCACCCGCATCAGCCAG------------------------------------------------------------------------------CTCAGGTGGACACCCCAGACCTCCTGTCCACCGAGCAGCCCCCAGACTCCATAGAC---CTCCTCCCCAGTCTGTGGGATACTCCTCCATGCACACATGTGAACATACACAGAGATCCAAACACAGGTGCAGACATGAAATGTACACTGCGTGCACACATGTATAAACACGTTCACACCCACATGCTCACACTGGGATATGCACACACATACATGTGTGCACACCATCACATGTGCACACACACCTCCCAGCTGCTGGGAGGAGATAGGCAGCAATATGCCAGACCCCCCCCCCACTGAGGGCCTTGCTTGCCTGATGGAGCTGTGGCTCTCCACTTATTGAGCACAGCCCTCTTAGTCCACATGTGTCTGCCTTCCAGGTGCAAGTGCTGGGCAGTCAGGACGGTGCCTAAGTGGACCTCAGACATGGCTCAGCCATAGGACCTGCCACACAAGCAGCCGTGGACACAACGCCCACTACCACCT-CCCACATGGAAATGTATCCTCAAACCGTTTAATCAATAAAGCCTCTTCCGCAGCTCAGGC------TCCTGTCTCTGCCCCCACAGAGGGGCACACAAATGGGGACATCAGGAACACACT s ponAbe2.chrUn 9507303 2801 + 72422247 ccctaaccctaac-----ccctaacccttaccggtgaccctactgtatccctaactcctaaccaacgttgatccctaaccctaaaccccttactgtaaccataaacctcatcccaaccctatccctagccttaGTGCCATCCCCCAGGCTTTTTCCAGGATGAAATTTTATGTGATTGTTTGGAATAGGTGGAAATTTCTCCTCATTTAGGAGTCCTTCAATGTAACAAGGATCTTGGTCTTCACAGAGACCCTAAACGCATGTGGCCCAGGGTCATATGGATGCCATCAGCCAGCAGGTGGCAGCAGGGGCCCTTTGGATTTGAACCGTGCAGCTCAGTCAGAGGGCTGGACTGGGACACCCCTACTCATGGTCTCTCTTGGCAGGGTTTTGTTTGGTGACTCCAGGTGTCCCAACCTCCTGTGTCCATTGTAATATGTCCTGGGACCATCTCCCCCAGGGCCTTCGACCTCTCCTTGCTGTCCTGGCTACTGATGGAAGATGTACCTCCAGCCTGTCCCATTCCTCACTTCCTGCTGAGACCTGGCCCCAGCATGGCCAGCTCTATGTTCCTCAGACCCTCTCAGGCCACCTTCTCTCTTCTAGGCACTGCCACTGGGCTCCTCCCCACCCCATAGATCCACAGCCCCCAGGTAGTCCTACAGCTGTGTCCACTCTTGCAGCCTGCACCCCCTTCCCCTAGTAGGCAA-CCCCATCTGAGTAGTGAGGGGC-CCCTGCCTGATTGGAGACCCCCAGATGCAGACCAAGATCACACAGCACACTGATAAGAGGAGGGATTCCCACCTTAAAAGAAAGGCATGGGGCCAACCCCAGATCCCGCCACCCTCAGCCTCAAGAGCAGGCATGACTAGAGGCCCTTGGTGGCCAGGACCCACTGCCTTCTTCACCGACCAGTTGGCATGGCCT--CTCACCAGTGTTCCCTCCTAACACACCTGTTCTCTCTCTTACACACCCTAAAACCGCTTGCCAACCACCTGTCACACAGCCACTCCATGCCTGTTGCTGCTTGGCACCCACTGGGGGCCAGGGATGTGAACAAACCTCATCTGAGCTTGTTGCCAGGTCCTAATGGGCAGGTCCGGTCCGCCCTCTGGGAGAGGTGCTGTCCGGTGAAGTATAAAATCCCGGGATTCTGGCTGGAGGCAGCTCCTGAGACTGCCAGCATGAAGGGGAGCCGTGCCCTCCTGCGGGTGGCCCTCACCCTGTTCTGCATCTGCCGTGAGTCTGTGCCACTGGGGTTTCCACAACATTCAGGGTCGGGGGGGGGGAGTGGGGGGGTACCTGAGAAGGTAAAACCCTGGCATCAGGCCCCTGCAGTGAACACTCCACCTGCTTCTGTCATAGAAGTGGGCAAGGACCCTGCAGAACCCGTGCCCACCCTAATCCACCCCAACCAAAGACAAAGCCCAGCTGACCCAACACCAGCC--GTGTCTCCTACCCCAGCCCAGTCCAGCCTGACCTGACCCTTCAAGCCTCTGGTCATACTAGCCTCTCATCAGGGGAAATTTCCCCCACACCAGAAGCTTAACTTTCCTTCCCTGGGGATCCCAGGGAATGCCGAGTGGAAACTGGAGCAGCTAAGATTAAGGGGGATGTGGAGGGGTCTTCGGGCTTTGTGGAGTTGGGGGTGTTGTGGAGGAAGCTCTGGGGAGGAGAGGTAGGCATTGAAGGGGAAGGTCTGGAGACCGTGGAGGTTGGAGCCCTGAGGCAGGTCCAGGGCTGCAGTTGCACCAGAGTCACCCTGTCCTGTCCTGGCATCATCTCGCTCATGATGCAGGAATGGCCACAGGGGAGGACAACGATGAGTTTTTCATGGACTTCCTGCAAACACTACTGGTGGGGACCCCAGAGGAGCTCTATGAGGGGACCTTGGGCAAGTACAATGTCAACGAAGATGCCAAGGCAGCAATGACTGAACTCAAGTCCTGCATAGACGGCCTGCAGCCAATGCACAAGGCGGAGCTGGTCAAGTTGCTGGTATGAGAGC-GGGGGGGCACCCCATTTTCTAAAGACCTGCAGCCTTATCAAGACCACCCAACACAGCACCCCCACAGCCTACCCCACCCACAGACATC-CACCACCCACAGATACTGGACCCGCATCAGCCAGCTCAGGTGGACACCCCAGACCTCCTGTCCACCGAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCAGGTGGACACCCCAGACCTCCTGTCCACCGAGCAGCCCCCAGACTCCATAGACCTGCTCCTCCCCAGTCTGTGGGATACTCCTCCATG--CACATGTGAACATACACAGAGATCCAAACACAGGTGCAGACATGAAATGCACACTGCGTGCACACATGTATGAACACATTCACACGTGGGTACTTACACTGGGATATGCACACACATACACGTGTGCACACCATCACATGTGCACACACACCTCCCAGCTGTTGGGAGGAGATGGGCAGCAATATGCCAGA---CCCCCCCACTGAGGGCCTTGCTTGCCTGATGGAGCTGTGGCTTTCCACTTATTGAGCACAGCCCTCTTAGTCCACACGTGTCTGCCTTCCAGGTGCAAGTGCTGGGCAGTCAGGACGGTGCCTAAGTGGACCTCAGACATGGCTCAGCCATAGGACCTGCCACACAAGCAGCCACGGACACGACGCCCACTACCACCT-CCCACATGGAAATTTATCCTCAAACCGTTTAATCAATAAAGC--CTTCTGCAGCTCAGGCTCTGGTTCCTGTCTCTGCCCCCACAGAGGGACACACAAATGGGGACATCAGGAACACACT i ponAbe2.chrUn C 0 C 0 s macFas5.chr14 3767 2687 + 130733371 cctgaaccctaatccaaaccctaaccctaacc--cagccctactgtatccctaactcctaaccaatgctgagccctaacccttaaccccttaccataaccataatcctcatcctaacccttaccctagccttaTTTCCATCCCGCATACTTTGTCCACGATGGGATTTTATTTCATTGTTTGGAGTAGGTGTAAATCTCTGCTCATTTAGGAGTCCTTCACTGTAACAAGGACCTTGGTCTTC-CAGAGACCCTAAACGCGAGTGGCCCGGGATCCTGGGGACGCCATCAGCCACCAGGTGGCAGCAGGGGCCCTTTGTATTTGGACCGTGTGGCTCAGCCAGAGGACTGGACTGGGAAACCCCTACTCATGGCCTCTCTTGGGGTGATTTTGTTAGGTGACTCCAGGTGTCCCAACCTCCTGTGTCCATTGTAATATGTCCTGGGACCATCT-CCCCAGGGCCTTCGACCTCTCCTTGCTGTCCTGGCTACT-------GATGTACCTCCAGCCTCTCCCATTCCTCACTTCCTGCTCAGACCTGGCCCCGGCATGGCCAGCTCTATGTCTCTCGGATCCTCTCAGGCCACCTTCTCTCTTCTAGGCACTGCCACTGGGCTGCTCCTCACCCCATAGATCCACAGTCCCCGGGCAGTCCTACGGCAGTGTCCACTGGTGCAGCCTGCACCCCCTTCCCCCAGTCAGCCACCCCCATCTGAGTACTGAGGGGG-CCCTGCCTGATTAGAGACCTCCAGATGCAAACCCTGATCACACAGCACAGTGATAAGAGGAGGGATTCCTACCTCAAAAGAAAGGCATGGGACCAAGCCCAGATCCCACCACCCTCGGCCTCAAGGGCAGGCATGACTAGAGGCCCTTGGTGACCAGGACCCGCTGCCTTCTTCACCGACCGGCTGGCATGGCCTCCCTCACCAGCGTTCCCTCCTAACACACCTGT--TCTCTCTGACACACCCTAAAGCCACTTGCCAACCACCTGTCACACAGCCACCCCATGCCTGTTGCTGCTTGGCACCCACTGGGAGACAGGGATGTGAATAAACCTCATCTGAGCTGGCTGCCAGATCGTAATGGGCAGGTCTGGTCCGCCCTGTGGGAGAGGTGCTGCCCGGTGAGGCATAAAATCCCGGGATTCTGGCTGGAGGCAGCTCCTGAGATTGCTGGCATGAAGGGGAGCCGTGCCCTCCTGCTGGTGGCCCTCACCCTGTTCTGCATCTGCCGTGAGTCTGTGCCACT-GGGTTTCCAGAACATTCAGG---GGCAGGGGG--GT-TGGGGGTACCCGAGAAGGTAAAATCCTGGCATTAGGCCCCCGCAGTGAACATTCCACCTGCACCTGTCACAGAAGTGGGTAAGGACCCTGCAGAACCCGTGCCCACCCAACTTCACCCCAACCGAAGACAAAGCCCAGCTGAC--------------------CCTACCCCAGCCCCATCCAGCCTGACCTGGCCCTTCAAGCCCCTGGTCAGACCAGCTTCTCATCAGGGGAAA-TTCCCCCACACCAGGGGCTTAACTTTCCTTCCCTGGTGATCCCAGGGAATGCTGAGTGGAAACTGGAGCAGCTAAGATTAAGGGGGATGTGAAGGGGTCTTCGGGCAAGGTGGAGTTGGGGGTGTTGTGGAGGAAGCCCTGGGGAGGAGGGGTGGGCATTGAAGGGGAAGGTCTGGAGACCATGGAGGTTGGAGCCCTGGGGCAGGTCCGGGGCTGTGGTTGCACCGGAGTCACCCTGTCCTGTCTTGGCATCATCTCGCTCGTGATGCAGGGCTGGCCACAGGGGAGGACTGCAATGAGTTTTTCATGGACTTCCTGCAAACACTACTGGTGGGGACCCCAGAGGAGCTCTATGAGGGGCCCCTGGGCAAGTACAATGTCAACGAAGATGCCAAGGCAGCAATGACTGAACTCAAGTCCTGCATAGACGGCCTGCAGCCAATGCACAAGGCAGAGCTGATCAAGTTGCTGGTATGAGGGCGGGGGGGGCACACCGTTTTCTAAAGACCTGCAGCCTTACCAAGATCACCCAACATAGCACCCCCACAGCCTA--CCACCTACAGACATCACACCACCCACAGACATTGAACCCGCATCAGCCAG------------------------------------------------------------------------------CTCAGGTGGGCACCCCAGACCTCCTGTCCACAGAGCGGCCCCCAGACTCCATTGACCTGCTCCTCCCCAGTCTGTGGGCTACTCCTCCACGCACACATGTGAACATACACAGAGATCCAAACACAGGTGCAGACATGCAATGCACACTGCGTGCACACATGTATAA--------ACACACGCATGCTCACACTGGGATACGCACACACATACATGTGTGTACACCATCATGCATGCACACACACCACTCAGCTACTGGGAGGAGATGGGCAGCAATATGCCAGA---TCCCCCCACAGAGGGCCTTGCTTGCCTGATGGAGCTGTGGCTCTCCGCTTATTGATCACAGCCCTCTTAGTCCGCGTGTGTCTGCCTTCCAGGTGCATGTGCTGGGCAGTCAGGACGGTGCCTAAGTGGACCTCAGACATGGCTCAGCCATAGGACCTGCCACACAAGCAGCCATGGACACGCCGCCCACTACCACCTCCCCACATGGAAATTTACCCTCAAACCGTGTAATCAATAAAGC--CTTCCGCAGCTCAGGCTCTGGTTCCTCTCTCTCCCCCCACAGACGGACACACAAATGGGGACATTGAGAACACACT i macFas5.chr14 C 0 C 0 s papAnu2.chr14 13944 2683 + 123829720 cctgaaccctaatccaaaccctaaccctaacc--cagCCCTACTGTATCCCTAACTCCTAACCAGTGCTGAGCCCTAACCCTTAACCCCTTACCATAACCATAACCCTCATCCTAACCCTTACCCTAGCCTTATTTCCATCCCGCATACTGTGTCCACGATGGAATTTTATTTCATCGTTTGGAGTAGGTGTAAATCTCTGCCCACTTAGGAGTCCTTCACTGTAACAAGGACCTTGGTCTTC-CAGAGACCCTAAACGCGAGTGGCCCGGGATCCTGGGGACGCCATCAGCCACCAGGTGGCAGCAGGGGCCCTTTGTATTTGGACCGTGTGGCTCAGCCAGAGGACTGGACTGGGAAACCCCTACTCATGGCCTCTCTTGGGGTGGTTTTGTTAGGTGACTCCAGGTGTCCCAACCTCCTGTGTCCATTGTAATATGGCCTGGGACTATCT-CCCCAGGGCCTTCGACCTCTCCTTGCTGTCCTGGCTACT-------GATGTACCTCCAGCCTCTCCCATTCCTCACTTCCTGCTCAGACCTGGCCCCGGCATGGCCAGCTCTATGTCTCTCGGACCCTCTCAGGCCACCTTCTCTCTTCTAGGCACTGCCACTGGGCTGCTCCTCACCCCATAGATCCACAGTCTCCAGGCAGTCCTACGGCAGTGTCCACTGGTGCAGCCTGCACCCCCTTCCCCCAGTCAGCCACCCCCATCTGAGTACTGAGGAGGTCCCTGCCTGATTAGAGACCTCCAGATGCAAACCCTGATCACACAGCACAGTGATAAGAGGAGGGATTCCTACCTCAAAAGAAAGGCATGGGACCAAGCCCAGATCCCACCACCCTCGGCCTCAAGGGCAGGCATGACTAGAGGCCCTTGGTGACCAGGACCCGCTGCCTTCTTCACCGACCGGCTGGCATGGCCTCCCTCACCAGCGTTCCCTCCTAACACACCTGT--TCTCTCTGACACACCCTAAAGCCACTTGCCAACCACCTGTCACACAGCCATCCCATGCCTGTTGCTGCTTGGCACCCACTGGGAGACAGGGATGTGAATAAACCTCATCTGAGCTGGCTGCCAGATCCTAATGGGCAGGTCCGGTCCGCCCTGTGGGAGAGGTGCTGCCCGGTGAGGCATAAAATCCCGGGATTCTGGCTGGAGGCAGCTCCTGAGATTGCTGGCATGAAGGGGAGCCGTGCCCTCCTGCTGGTGGCCCTCACCCTGTTCTGCATCTGCCGTGAGTCTGTGCCACTGGGGTTTCCAGAACATTCAgg---ggcaggggg--gt-tgggggTACCCGAGAAGGTAAAATCCTGGCATTAGGCCCCCGCAGTGAACATTCCACCTGCACCTGTCACAGAAGTGGGTAAGGACCCTGCAGAACCCGTGCCCACCCAACTCCACCCCAACCGAAGACAAAGCCCAGCTGAC--------------------CCTACCCCAGCCCCATCCAGCCTGACCTGGCCCTTCAAGCCCCTGGTCAGACCAGCTTCTCATCAGGGGAAA-TTCCCCCACACCAGGGGCTTAACTTTCCTTCCCTGGTGATCCCAGGGAATGCTGAGTGGAAACTGGAGCAGCTAAGATTAAGGGGGATGTGAAGGGGTCTTCGGGCAAGGTGGAGTTGGGGGTGTTGTGGAGGAAGccctggggaggaggggtgggCATTGAAGGGGAAGGTCTGGAGACCATGGAGGTTGGAGCCCCGGGGCAGGTCCGGGGCTGTGGTTGCACCGGAGTCACCCTGTCCTGTCTTGGCATCATCTCGCTCGTGATGCAGGGCTGGCCACAGGGGAGGACTGCAATGAGTTTTTCATGGACTTCCTGCAAACACTACTGGTGGGGACCCCAGAGGAGCTCTATGAGGGGCCCCTGGGCAAGTACAATGTCAACGAAGATGCCAAGGCAGCAATGACTGAACTCAAGTCCTGCATAGACGGCCTGCAGCCAATGCACAAGGCAGAGCTGATCAAGTTGCTGGTATGAGGGCAgggggggCACACCGTTTTCTAAAGACCTGCAGCCTTACCAAGATcacccaacacagcacccccacagccta--ccacctacagacatcacaccacccacagacaTTGAACCCGCATCAGCCAG------------------------------------------------------------------------------CTCAGGTGGGCACCCCAGACCTCCTGTCCACAGAGCGGCCCCCAGACTCCATAGACCTGCTCCTCCCCAGTCTGTGGGCTACTCCTCCACGCACACATGTGAACATACACAGAGATCCAAACACAGGTGCAGACATGCAATGCACactgtgtgcacacatgtataaacacattcacacacgcatgctcacactgggatacgcacacacatacatgtgtgtacaccatcatgcatgcacacacaccactcagCTGCTGGGAGGAGATGGACAGCAATATGCCAGA---TCCCCCCACAGAGGGCCTT--------------GCTGTGGCTCTCCACTTATTGATCACAGCCCTCTTAGTCCTCGTGTGTCTGCCTTCCAGGTGCATGTGCTGGGCAGTCAGGACGGTGCCTAAGTGGACCTCAGACATGGCTCAGCCATAGGACCTGCCACACAAGCAGCCATGGACACGCCGCCCACTACCACCTCCCCACATGGAAATTTACCCTCAAACCGTGTAATCAATAAAGC--CTTCCGCAGCTCAGGCTCTGgttcctctctctccccccacaGACGGacacacaaatggggacattgagaacatact i papAnu2.chr14 C 0 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=329.000000 s hg38.chr17_GL383563v3_alt 79129 2 + 375691 CG s ponAbe2.chrUn 9510104 2 + 72422247 CA i ponAbe2.chrUn C 0 C 0 s macFas5.chr14 6454 2 + 130733371 CA i macFas5.chr14 C 0 T 44 e papAnu2.chr14 16627 0 + 123829720 C e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 79131 66 + 375691 AGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCACTCAAGGAGCACACGTGCAAAAGT e papAnu2.chr14 16627 0 + 123829720 C e macFas5.chr14 6456 44 + 130733371 T e ponAbe2.chrUn 9510106 0 + 72422247 C e panTro4.chr4 121871739 0 + 193495092 I a score=3038.000000 s hg38.chr17_GL383563v3_alt 79197 38 + 375691 CCCCACAGAGGGACACACAAATGGGGACATCAGGAACA s macFas5.chr14 6412 38 + 130733371 CCCCACAGACGGACACACAAATGGGGACATTGAGAACA i macFas5.chr14 T 44 C 0 e papAnu2.chr14 16627 0 + 123829720 C e ponAbe2.chrUn 9510106 0 + 72422247 C e panTro4.chr4 121871739 0 + 193495092 I a score=573.000000 s hg38.chr17_GL383563v3_alt 79235 2 + 375691 CA s macFas5.chr14 6450 2 + 130733371 CA i macFas5.chr14 C 0 I 4 s papAnu2.chr14 16627 2 + 123829720 ca i papAnu2.chr14 C 0 C 0 e ponAbe2.chrUn 9510106 0 + 72422247 C e panTro4.chr4 121871739 0 + 193495092 I a score=43453.000000 s hg38.chr17_GL383563v3_alt 79237 86 + 375691 GGGCCACAGCCACACACACAGACCCACATACAGAGGATCCTACTCAAGGAGCACACGTGCGAAAGTCCCCCACAGAGGGACACACA s ponAbe2.chrUn 9510106 86 + 72422247 GGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCGCTCAAGGAGCACACGTGTGAAAGTCCCCCACGGAGGGGCACACA i ponAbe2.chrUn C 0 T 130 s macFas5.chr14 6456 86 + 130733371 GGGACACAGCCACACACACAGACCCACAGACAGAGGGTCCTGCTCAAGGAGCACATGTGTGAAGGTCCTCTACAGAGGGGCACACA i macFas5.chr14 I 4 T 130 s papAnu2.chr14 16629 86 + 123829720 gggacacagccacacacacagacccacagacaGAGGGTCCTACTCAAGGAGCACATGTGTGAAGGTCCTCTACAGAGGGGCACACA i papAnu2.chr14 C 0 T 88 e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 79323 193 + 375691 AATGGGGACATCAGGAACACAGGGCcacagccacacacacagacccacacacaGAGGATCCCACTCAAGGAGCACACATGCGAAAGTCCCCACAGAGGGGCACACAAGTGGGGACATCAGGAACACAGGGCcacagccacacacacagacccacacacaGAGGATCCCACTCAAGGAGCACACGTGCGAAAGT e papAnu2.chr14 16715 88 + 123829720 T e macFas5.chr14 6542 130 + 130733371 T e ponAbe2.chrUn 9510192 130 + 72422247 T e panTro4.chr4 121871739 0 + 193495092 I a score=27318.000000 s hg38.chr17_GL383563v3_alt 79516 110 + 375691 CCCCACAGAGGGGCACACAAATGGGGACATCAGGAACACACTCAGGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCACTCAAGAAGCACAAGTGCGAAAGT s ponAbe2.chrUn 9510062 110 + 72422247 CCCCACAGAGGGACACACAAATGGGGACATCAGGAACACACTCAGGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCGCTCAAGGAGCACACGTGTGAAAGT i ponAbe2.chrUn T 130 T 110 s macFas5.chr14 6412 110 + 130733371 CCCCACAGACGGACACACAAATGGGGACATTGAGAACACACTCAGGGACACAGCCACACACACAGACCCACAGACAGAGGGTCCTGCTCAAGGAGCACATGTGTGAAGGT i macFas5.chr14 T 130 C 0 e papAnu2.chr14 16715 88 + 123829720 T e panTro4.chr4 121871739 0 + 193495092 I a score=600.000000 s hg38.chr17_GL383563v3_alt 79626 2 + 375691 CC s ponAbe2.chrUn 9510062 2 + 72422247 CC i ponAbe2.chrUn T 110 C 0 s macFas5.chr14 6522 2 + 130733371 CC i macFas5.chr14 C 0 T 110 e papAnu2.chr14 16715 88 + 123829720 T e panTro4.chr4 121871739 0 + 193495092 I a score=26780.000000 s hg38.chr17_GL383563v3_alt 79628 108 + 375691 CCACAGAGGGGCACACAAATGGGGACATCAGGAACACACTCGGGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCACTCAAGGAGCACACGTGCAAAAGT s ponAbe2.chrUn 9510064 108 + 72422247 CCACAGAGGGACACACAAATGGGGACATCAGGAACACACTCAGGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCGCTCAAGGAGCACACGTGTGAAAGT i ponAbe2.chrUn C 0 T 66 s macFas5.chr14 6414 108 + 130733371 CCACAGACGGACACACAAATGGGGACATTGAGAACACACTCAGGGACACAGCCACACACACAGACCCACAGACAGAGGGTCCTGCTCAAGGAGCACATGTGTGAAGGT i macFas5.chr14 T 110 C 0 e papAnu2.chr14 16715 88 + 123829720 T e panTro4.chr4 121871739 0 + 193495092 I a score=200.000000 s hg38.chr17_GL383563v3_alt 79736 2 + 375691 CC s macFas5.chr14 6522 2 + 130733371 CC i macFas5.chr14 C 0 T 68 e papAnu2.chr14 16715 88 + 123829720 T e ponAbe2.chrUn 9510172 66 + 72422247 T e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 79738 36 + 375691 CCACAGAGGGGCACACAAGTGGGGACATCAGGAACA e papAnu2.chr14 16715 88 + 123829720 T e macFas5.chr14 6524 68 + 130733371 T e ponAbe2.chrUn 9510172 66 + 72422247 T e panTro4.chr4 121871739 0 + 193495092 I a score=191.000000 s hg38.chr17_GL383563v3_alt 79774 2 + 375691 CA s papAnu2.chr14 16627 2 + 123829720 ca i papAnu2.chr14 T 88 C 0 e macFas5.chr14 6524 68 + 130733371 T e ponAbe2.chrUn 9510172 66 + 72422247 T e panTro4.chr4 121871739 0 + 193495092 I a score=177547.000000 s hg38.chr17_GL383563v3_alt 79776 366 + 375691 GGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCACTCAAGGAACACACGTGTGAAAGTCCCC-ACAGAGGTACACACAGGGTCCACACAGGAGCAGGCACACCACAGGCAAGACCCAAAATGGAAATCCAGGCAGACGCCACGCAGGCAGGTGGACAGAGCACAGAGCCAGACAACACTGCGTGGTCGTCCGGAGGGGGCGTCTGGAGGGGGCGTCCGGAGGGAGACGGGCGGCAGAGGCAGCGGTATGAGGC----------GGGAGCCCCAGAAAGAGGAAGTGTCCAGGACTGGGTGGACACAGACCCCATGTCGCCCATGGGCTAGGTCAGGGCGGGGG-TGCTCAGCATCTGAAAGCTGGTGTCG s ponAbe2.chrUn 9510106 367 + 72422247 GGGCCACAGCCACACACACAGACCCACATACAGAGGATCCCGCTCAAGGAGCACACGTGTGAAAGTCCCCCACGGAGGGGCACACAGGGTCCACACAGGAGCAGGCACATCACAGGCAAGACCCAAAATGGAAATCCAGGCAGACGCCATGTAGGCAGGTGGACAGCGCACGGAGCCAGACAGCACTGCGTGGACGTCCAGAGGGGGCATCTGGAGGGGGCGTCTGGAGGGAGACGGGCGGCAGAGGCAGCGGTATGAGGT----------GGGAGCCCCAGAAAGAGGAAGTGTCCAGGACTGGGTGGACACAGACCCCATGTCGCCCATAGGCTAGGTCAGGGCAGGGG-TGCTCAGCATCTGAAAGCTGGTGTCG i ponAbe2.chrUn T 66 C 0 s macFas5.chr14 6456 359 + 130733371 GGGACACAGCCACACACACAGACCCACAGACAGAGGGTCCTGCTCAAGGAGCACATGTGTGAAGGTCCTCTACAGAGGGGCACACAGGGTCCACACAGGAGCAGGCACACCACAGGCAAGACCCAAAATGGAAATCCAGGCAGACGCCATGTAGGCAGGGGGACAGAGCACAGAGCCAGACAGCACCATGTGGAC-------------------AGAGGGCGTCCAGAGGGAGACGGGCGGCAGAGGCAGCAGTATGATGTGGGAGAGACAGGGAGCCCCAGAAAAAGGAAGTGTCCAGGACTGGGTGGACACAGACCCCATGTCGCCCATGGGCTAGGTCAGGGCGGGGGTTGCTCAGCATCTGAAAGCTGGTGTCG i macFas5.chr14 T 68 I 126 s papAnu2.chr14 16629 359 + 123829720 gggacacagccacacacacagacccacagacaGAGGGTCCTACTCAAGGAGCACATGTGTGAAGGTCCTCTACAGAGGGGCACACAGGGTCCACACAGGAGCAGGCACACCACAGGCAAGACCCAAAATGGAAATCCAGGCAGACGCCATGTAGGCAGGGGGACAGAGCACAGAGCCAGACAGCACCATGTGGAC-------------------AGAGGGCGTCCAGAGGGAGACGGGCGGCAGAGGCAGCAGTATGAGGTGGGAGAGACAGGGAGCCCCAGAAAGAGGAAGTGTCCAGGACTGGGTGGACACAGACCCCATGTCGCCCATGGGCTAGGTCAGGGCGGAGGTTGCTCAGCATCTGAAAGCTGGTGTCG i papAnu2.chr14 C 0 I 126 e panTro4.chr4 121871739 0 + 193495092 I a score=280153.000000 s hg38.chr17_GL383563v3_alt 80142 556 + 375691 AGCCCCAAGAGGACCCCTGACAAGGCCAAG----AAAAAGGTACACCCATGTCCAAGGGGGTTGGGAGCCGCAGGTGAGCAGCCTCT---GAGGTCAGCCAGGGCAGCCCCAGCGCCCACACTGACTCACACCCACCACAACCAGCACAGACCCTGATCCTGACCCTGGATCCCAGACTCTCCCACAGCCAGAACCTTCCAGCATTTCAGCTGCCCAATCTATGGTCTCTTCTGGGGGCACAGCTGAGTGGAACCGCCCCATCCTTGGCCACCCTGGGTGCTGAGCCCTGACACTTCACTGCCCCGGCCCTCCTCTCCACACCTCTGTCCTGTCTGAGCCTGGCAAGGGGGCCATGCGGTGCTGTC-GGCTCTGTGCTCTGTCCCACCTGCCTACATGGTATCTGCCTGGATTTCCATTTGGCTGAGGGAGCCCTAGGGAGGGGGCCCTGGAGGACTTGGTTACAGGGGACCTGGTGAGGGGACCCAGTGAGGGGGACTTCATGGGTGGGTGCCTGGTTGAGGGGACCTGGTGAAAGAAACATGGTGAGGGGGCCTGGTGAGGG s ponAbe2.chrUn 9510473 555 + 72422247 AGCCTCAAGAGGACCCCTGACAAGGCTGAG----AAAAAGGTACACCCATGTCCAAGGGGGCCGGGAGCCACAGGTGAGCAGCCTCT---GAGGTCAGCCAGGGCAGCCCCAGTGCCCACACTGACTCACGCCCACCACAACCAGCACAGACCCGGATCCTGACCCTGGAACCCAGGCTCTCTCACAGCCAGAACCTTCCAGCATTTCAGTTGCCCAATCTATGGTCTCTTCTGGGGGCACAGCTGAGTGGAACTGCCCCATCCTTGGCCACCCTGGGTGCTGAGCCCTGACACTTCACTGCCCCGGCCCTCCTCTCCACACCTCTGTCCTGTCTGAGCCTGGCAAGGAGGCCACGCCGTGCTGTC-GGCCCTGTGCTCTGT-CCACCTGCCTACATGGTATCTACCTGGATTTCCATTTGGCTGAGGGAGCCCTAGGGAGGGGGCCCTGGAGGACTTGGTTACAAGGGACCTGGTGAGGGGACCCAGTGAGGGGGACTTCATGGGTGGCTGCCTGGTTGAGGGGACTTGGTGAAAGAAACATGGTGAGGGGGCCTGGTGAGGG i ponAbe2.chrUn C 0 I 27 s macFas5.chr14 6941 561 + 130733371 AGCCCCAAGACGACCCCCGACAAGGCCGAGAGAAAAAAAGGTACACCCGTGTCCAAGGGGGATGGGAGCCACAGGTGAGCAGCCTCTGACGAGGTCAGCCAGGGCAGCAGCAGCGCCCACAATGACTCACGCCCACCACAACCAGCACAGACCCTAATCCTGACCCTGGATCCCAGGCTCTCCCACAGCCAGAACCTTCCAGCACCTCAGTTTCCCAATCTATCGTCTCTTCTGGGGGCACAGCTGAGTGGAACTGACACATCCTTGGCCACCCTGGGTGCTGAGCCCTGAAACTTCACTGCCCTGACCCC-CTCTCCACACCTCTGTCCTGTCTGAGCCTGGCCAGGAGGCCACGCGGTGCTGTCTGGCTCTGTGCTCTGT-CCACCTGCCTAGATGGTCTCTGCCTGGATTTCCATTTGGCTGACGAAGCCCTA-GGAGGGGGCCCTGGAGGACTTGGTTACAGGGGACCTGGTGAGGGGACCCAGTGAGGGGGACTTCATGAGGAGACGCCTGGTTGAGGGGACCTGGTGAGAGAAACATGGTGAGGGGGCCTGGTGAGGG i macFas5.chr14 I 126 C 0 s papAnu2.chr14 17114 562 + 123829720 AGCCCCAAGACGACCCCGGACAAggccaagagaaaaaaaggtaCACCCGTGTCCAAGGGGGATGGGAGCCACAGGTGAGCAGCCTCTGAGGAGGTCAGCCAGGGCAGCAGCAGCGCCCACAATGACTCACGCCCACCACAACCAGCACAGACCCTAATCCTGACCCTGGATCCCAGGCTCTCCCACAGCCAGAACCTTCcagcacctcagtttcccaatctaTGGTCTCTTCTGGGGGCACAGCTGAGTGGAACTGACACATCCTTGGCCACCCTGGGTGCTGAGCCCTGAAACttccctgccctggcccctctcTGCACACCTCTGTCCTGTCTGAGCCTGGCCAGGAGGCCATGCAGTGCTGTCTGGCTCTGTGCTCTGT-CCACCTGCCTAGATGGTCTCTGCCTGGATTTCCATTTGGCTGACGAAGCCCTA-GGAGGGGGCCCTGGAGGACTTGGTTACAGGGGACCTGGTGAGGGGACCCAGTGAGGGGGACTTCATGAGGGGATGCCTGGCTGAGGGGACCTGGTGAGAGAAACATGGTGAGGGGGCCTGGTGAGGG i papAnu2.chr14 I 126 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=7241.000000 s hg38.chr17_GL383563v3_alt 80698 26 + 375691 GTGGTCTGGTGAGGGAACTTAGGGAA s macFas5.chr14 7502 26 + 130733371 GTGGTCTGGTGAGGGAACTTAGGGGA i macFas5.chr14 C 0 C 0 s papAnu2.chr14 17676 26 + 123829720 GTGGTCTGGTGAGGGAACTTAGGGGA i papAnu2.chr14 C 0 C 0 e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=-429.000000 s hg38.chr17_GL383563v3_alt 80724 14 + 375691 ACCTGGT---------------------------------------GAGGAGG s papAnu2.chr14 17702 53 + 123829720 ACCTGGTGAGGGGACATGAgggggggCCTTGGTGAGGGGATGTGGCGAGGAGT i papAnu2.chr14 C 0 C 0 e macFas5.chr14 7528 0 + 130733371 C e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=11499.000000 s hg38.chr17_GL383563v3_alt 80738 93 + 375691 ACCTGGTGAGGGGACATGG----------------GGGGGACCTTGGTGAGGGGACCTGGTGAGGGGACATAGGGGGGACCTTGGTGAGG----------------------------GGACCTGGTGAGGAGGACC------------- s macFas5.chr14 7528 81 + 130733371 ATCTGGTGAGGGGACATGG-----------------GGGGGCCTTGGTGAGGGGACGTGGTGA-----------GGGGAACCTGGTGAGG----------------------------GGACGTGGTGAGGGGAACC------------- i macFas5.chr14 C 0 I 4 s papAnu2.chr14 17755 139 + 123829720 ACCTGGTGAGGGGACGTGGCCAAGGAAACATGGCGAGGAGGACTTGGTGAGGGGACGTGGTGA-----------GGGGAACCTGGTGAGGGGAGATGGCCAAGGAAACCTGGCGAGGAGGACTTGGTGAGGGGACCTGGCGAGGAGTACC i papAnu2.chr14 C 0 C 0 e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=-559.000000 s hg38.chr17_GL383563v3_alt 80831 3 + 375691 TG---------------G s papAnu2.chr14 17894 18 + 123829720 tggtgaggggacgtggtg i papAnu2.chr14 C 0 C 0 e macFas5.chr14 7609 4 + 130733371 I e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=11376.000000 s hg38.chr17_GL383563v3_alt 80834 84 + 375691 --------------GGGGGACCTTGGTGAGGGGACCTGGTGAGGGGAACATGGGTGGGGAGCCTTGGTGAGGGGACCTGGTGAGGGGACATAGGGGGG--- s macFas5.chr14 7613 89 + 130733371 GAGGGGACGTGGTGAGGGGAACCTGGTGAGGGGACGTGGCCAAGGAAACCTGGCGAGGAGGACCTGGTGAGTGGACATGGTGGTGGGAG------------ i macFas5.chr14 I 4 T 174 s papAnu2.chr14 17912 87 + 123829720 --------------aggggaacctggtgaggggacgtggtgaggggaacctggtgaggggaacctggtgaggggagatggtgaggggagatggtgagggga i papAnu2.chr14 C 0 C 0 e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=498.000000 s hg38.chr17_GL383563v3_alt 80918 13 + 375691 CCTTGGTGAGGGG- s papAnu2.chr14 17999 14 + 123829720 acctggtgagggga i papAnu2.chr14 C 0 C 0 e macFas5.chr14 7702 174 + 130733371 T e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=21422.000000 s hg38.chr17_GL383563v3_alt 80931 176 + 375691 ACCTGGTGAGGGGACATAG---GGGGGCCTTGGTGAGGGGACATGGG----------------GGGGACCTTGGTGAGGGGACCTGGTGAGGGG-ACATGG-GGGGGACCTTGGTGAGGGG-ACCTGGTGAGGGGACATG--GGGGGGACCTTGGTGAGGGG-ACCTGGTGAGGGG---------------------------ACATGG--GGGGGACCTTGGTGAGGGG- s macFas5.chr14 7528 146 + 130733371 ATCTGGTGAGGGGACATGG--------------------------------------------GGGGGCCTTGGTGAGGGGACGTGGTGAGGGGAACCTGGTGAGGGGACGTGGTGAGGGGAACCTGGTGAGGGGACGTGGTGAGGGGAACCTGGTGAGGGG-----------------------------------------ACGTGGCCAAGGAAACCTGGCGAGGAGG i macFas5.chr14 T 174 T 146 s papAnu2.chr14 18013 230 + 123829720 acctggtgaggggacgtggtgaggggaacctggtgaggggagATGGCCAAGGAAACATGGCGAGGAGGACTTGGTGAGGGGACCTGGCGAGGAGTACCtggtgaggggacgtggtgaggggaacctggtgaggggacgtggtgaggggaacctggtgaggggaacctggtgaggggagatggtgaggggagatggtgaggggaacctggtgaggggaacctggtgagggg- i papAnu2.chr14 C 0 I 1 e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=16429.000000 s hg38.chr17_GL383563v3_alt 81107 169 + 375691 ACCTGGTGAGGGGACATAG-------------------------------GGGGGCCTTGGTGAGGGGACCTGGTGAGGAGGACCTG--GGGGGGACCTTGGTGAGGGGACCTGGTGAGGGGAACATGGGTGGGGAGCCTTGGTGAGGGGACCTGGTGAGGGGACATG----------------GGGGGGACCTTGGTGAGGGGACCTGGTGAGGGGA-------------- s macFas5.chr14 7528 105 + 130733371 ATCTGGTGAGGGGACATGG-------------------------------GGGGGCCTTGGTGAGGGGACGTGGTGAGGGGAACCTGGTGAGGGG----------------------------ACGTGGTGAGGGGAACCTGGTGAGGGGACGTGGTGAGGGGA-------------------------------------------------------------------- i macFas5.chr14 T 146 I 55 s papAnu2.chr14 18244 232 + 123829720 acctggtgaggggacgtggtgaggggaaTCTggtgaggggaacctggtgaggggaacctggtgaggggacgtggtgaggggaacctggtgaggggaacctggtgaggggacgtggtgaggggaacctggtgaggggaacctggtgaggggacgtggtgaggggagATGGCCAAGGAAACATGGCGAGGAGGACTTGGTGAGGGGACCTGGCGAGGAGTACCTGGTGAGGGGA i papAnu2.chr14 I 1 C 0 e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=9620.000000 s hg38.chr17_GL383563v3_alt 81276 105 + 375691 ---CATAGGGGGGCCTTGGTGAGGGGACATG--GGGGGGA-CCTTGGTGAGGGG-ACCTGGTGAGGGGACATG--GGGGGGACCTTGGTG---------------AGGGGACCTGGTGAGGGGACATGG-- s macFas5.chr14 7688 87 + 130733371 ---------------------------CATGGTGGTGGGAGGCCTGGTGAGGGGAACCTGGTCAGGGGGACTTATAGGGGTGTCCTGTTG---------------GCGGAACCTGGTGAGGGGACCTGG-- i macFas5.chr14 I 55 T 142 s papAnu2.chr14 18476 130 + 123829720 CGTGGTGAGGGGAACCTGGTGAGGGGACATGGTGAGGGGA-ACCTGGTGAGGGGAACCTGGTGAGGGGACATggtgaggggaacctggtgaggggaacctggtgaggggaacctggtgaggggacgtggtg i papAnu2.chr14 C 0 C 0 e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=7794.000000 s hg38.chr17_GL383563v3_alt 81381 151 + 375691 GGGGGACCTTGGTGAGGGG-ACCTGGTGAGGAGGACCTGG-GGGGGACCTTGGTGAGGGGAGCATGGTGAGGGGAACATGG--------------GTGGGGAGCCTTGGTGAGGGG-ACCTGGTGAGGGGACATGGTGAGGGGACATG----------------GGGGGGACCTTGGTGAGGGG s papAnu2.chr14 18606 183 + 123829720 aggggaaTCTggtgaggggaacctggtgaggggaacctggtgaggggacgtggtgaggggaacctggtgaggggaacctggtgaggggacgtggtgaggggaacc-tggtgaggggaacctggtgaggggacgtggtgaggggagATGGCCAAGGAAACATGGCGAGGAGGACTTGGTGAGGGG i papAnu2.chr14 C 0 C 0 e macFas5.chr14 7775 142 + 130733371 T e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=2081.000000 s hg38.chr17_GL383563v3_alt 81532 31 + 375691 ACCTGGTGAGGGGAACATGGGTGGGGAGCCT s macFas5.chr14 7633 16 + 130733371 --------------ACCT-GGTGAGGGGACG i macFas5.chr14 T 142 C 0 s papAnu2.chr14 18789 30 + 123829720 ACCTGGCGAGGAGTACCT-GGTGAGGGGACG i papAnu2.chr14 C 0 C 0 e ponAbe2.chrUn 9511028 27 + 72422247 I e panTro4.chr4 121871739 0 + 193495092 I a score=17719.000000 s hg38.chr17_GL383563v3_alt 81563 52 + 375691 TGGTGAGGGGA--CCTGGTGAGG-GGACATGGTGAGGGGAGCCTGGTGAGGGGAA s ponAbe2.chrUn 9511055 54 + 72422247 TGGTGAGGGGAGCCTTGGTGAGG-GAACCTGGTGAGGAGGACCTGGTGAGGGGAA i ponAbe2.chrUn I 27 C 0 s macFas5.chr14 7649 53 + 130733371 TGGCCAAGGAAA-CCTGGCGAGGAGGACCTGGTGAGTGG-ACATGGTGGTGGGAG i macFas5.chr14 C 0 I 1 s papAnu2.chr14 18819 53 + 123829720 TGGTGAGGGGAA-CCTGGTGAGG-GGACATggtgaggggaacctggtgaggggaa i papAnu2.chr14 C 0 I 369 e panTro4.chr4 121871739 0 + 193495092 I a score=116474.000000 s hg38.chr17_GL383563v3_alt 81615 234 + 375691 CACGGTGAGGGGAACATGGTCAGGGGGACTTATAGGGGTGTCCTGTTGG-------------GGGGACCTGGTGGTGAGATCTGGTGAGGGGATCAAAGGCAGAAGCCATTGTCTTGGTCACATAGACAGAATCTAGAACCTGTCATCCCACAGAGCCACATTCTAGAGTTTAGAGTGGGGGACCTCTCCCCAATTCTGTAAGCCCATGAGGAGAGAGGAAGGCC-TTTCTCTCCATGCTCCTTTTGc s ponAbe2.chrUn 9511109 234 + 72422247 CCTGGTGAGGGGAACATGGTCGGGGGGACTTATAGGGGTGTCCTGTTGG-------------GGGGACCTGGTGGTGAGATCTCATGAAGGGATCAAAGGCAGAGGCCATTGTCCTGGTCACACAGACAGAATCTAGAACCTGTCATCCCACAGAGCCACATTCTAGAGTTTAGAGTGGGGGACCTCTCCCCAATTCTGGAAGCCCCTGAGGAGAGAGGAAGGTC-TTTCTCTCCATGCTCCTTTTGC i ponAbe2.chrUn C 0 N 0 s macFas5.chr14 7703 244 + 130733371 CCTGGTGAGGGGAACCTGGTCAGGGGGACTTATAGGGGTGTCCTGTTGGCGGAACCTGGTGAGGGGACCTGGTGGTGAGATCTGGTGAGGGGATCAAAGGCAGAGGCCATTGTCTTGGTCACACAGACAGAATCTAGAACCCGTCATCCCACAGAGCCACATTCTAGAGTTTAGACTGGGGGACCTCTCCCCAATTCTGTAAGCCCCTGAAGAGA---GAAGGCC-TTTCTCTCCATGCTCCTTTTGC i macFas5.chr14 I 1 N 0 s papAnu2.chr14 19241 244 + 123829720 CCTGGTGAGGGGAACCTGGTCAGGGGGACTTATAGGGGTGTCCTGTTGGCGGAACCGGGTGAGGGGACCTGGTGGTGAGATCCGGTGAGGGGATCAAAGGCAGGGGCCATTGTCTTGGTCACACAGACAGAATCTGGAACCCGTCATCCCACAGAGCCACATTCTAGAGTTTAGACTGGGGG-CCTCTCCCCAGTTCTGTAAGCCCCTGAAGAGA---GAAGGCCTTTTCTCTCCATGCTCCTTTTGC i papAnu2.chr14 I 369 N 0 e panTro4.chr4 121871739 0 + 193495092 I a score=0.000000 s hg38.chr17_GL383563v3_alt 81849 68 + 375691 ctaaccctaaccctaaccaccctaaccctgactctgaccctgaccctgaccctgaccctgaccctgac e panTro4.chr4 121871739 0 + 193495092 I a score=77.000000 s hg38.chr17_GL383563v3_alt 81917 3 + 375691 cct s nomLeu3.chr19 35685 3 - 81552678 CCA i nomLeu3.chr19 N 0 C 0 e panTro4.chr4 121871739 0 + 193495092 I a score=1419.000000 s hg38.chr17_GL383563v3_alt 81920 5 + 375691 aacTG s panTro4.chr17 73621 5 + 82630442 AACTG i panTro4.chr17 I 4353 C 0 s nomLeu3.chr19 35688 5 - 81552678 AACTG i nomLeu3.chr19 C 0 C 0 a score=8096.000000 s hg38.chr17_GL383563v3_alt 81925 14 + 375691 GACCCGCACATCTG s panTro4.chr17 73626 14 + 82630442 GACCCGCACATCTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 35693 14 - 81552678 GACCCGCACATCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 8821 14 + 80997621 GAGCCGCACCCCCC i macFas5.chr16 N 0 C 0 s papAnu2.chr16 21205 14 + 74645514 GAGCCGCGCACCCC i papAnu2.chr16 N 0 C 0 a score=1261049.000000 s hg38.chr17_GL383563v3_alt 81939 735 + 375691 AGCCTGCGTTTCCGTTTCCCCGAGAGACCCCGGACTCCCTCCCCCAAGGACAGGAACGCAACGCACTGGCAGAGCTCGCTGATTGGATGGGGGAGAGAAGTGGGCGGAGTGAGCACTAGGAGATCCTGTCATTGGATAAGAAAGAGAAGTGGGCAGGGTGGGCACT-GGTAGAGTCTC-TACTGGTTGGATAGGAGCGAGAAGCGGGCGGGGCTAGCACTGAGATCCTGCAATTGGACGGGCATGAAGTAGGTGGGGCGAGCACTGAGGAGACCCTGCCAATTGGACAAGAGAGAGAAGTGGGCGGAGTAAGCATTGGTAAAGCCTGCTGATTGGGCAAGAGACAGGAGTGGTAGGAGCAAGGACTGCGGAGAAGGCTGCTATTGGATGTTAGGGAAAAGAGGGCGGAACAAGAAGGTGGCGAGCTCTGCAGATTGGACAGGAGAGATAAGCAGGAGGAGCGAGCAATGAATGGAGCCAGCGGTGAAAAGAGCCCTGATAACTAGACAGGGGAGAGCAGTGGAACCAGAATTCAGGTTACGGTCACGGTGACAGCCGGAAAGGAAATTCCAGCATGGATGCCGACCGCACCaacccaaaactatgacccgagtcctaacccaccctaacccggccaaaaccgaacacccaaccctgactaaatgcgaaacgctgacccggacctggacctggacctagtacgaacccaagcctgaaccctaacccctaa-------cccctaat s panTro4.chr17 73640 684 + 82630442 AGCCTGCGTTTCCGTTTCCCCGAGAGACCCCGGACTCCCTCCCCCAAGGACAGGAACGCAACGCACTGGCAGAGCTCGCTGATTGGATGGGGGAGAGAAGTGGGCGGAGTGAGCACTAGGAGATCCTGTCATTGAATAAGAAAGAGAAGTGGGCAGGGTGGGCACT-GGTAGAGTCTC-TACTGGTTGGATAGGAGCGAGAAGCGGGCGGGGCTAGCACTGAGATCCTGCAATTGGACGGGCATGAAGTAGGTGGGGCGAGCACTGAGCAGACCCTGACAATTGGACAAGAGAGAGAAGTGGGCGGAGTAAGCATTGGTAAAGCCTGCTGATTGGGCAAGAGACAGGAGTGGTAGGCGCAAGGACTGCGGAGAAGGCTGCTATTGGATGTTAGGGAGAAGAGGGCGGAACAAGAAGGTGGCGAGCTCTGCAGATTGGACAGGAGAGATAAGCAGGAGGAGCGAGCAATGAATGGAGCCAGCGGTGAAAAGAGCCCTGATAATTAGACAGGGGAGAGCAGTGGAACCAGAATTCAGGTTACGGTCACGGTGACAGCCAGAAAGGAAATTCCAGCACGGATGCCAACCGCACCAACCCAAaactatgacccgagtcctaacccaccctaacccggccaaaaccgaacaccaaaccctgactaaatgcgaaacgctgacccggacctgg---------------------------------------------------------- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 35707 739 - 81552678 AGCCTGCGTTTCCGTTTCCCCGAGAGACCCCGGGCT-CCTCCTCCAGGGACAGGAACGCAACGCACTGGCAGAGCTCGCTGATTGGATGGGGGAGACAAGTGGGCGGAGTGAGCACTAGGAGAGCCTGTCATTGGATAAGAAAGAGAAGTGGGCAGGGTGGGCACT-GGTGGAG--TC-TACAGGTCGGATAGGAGCGAGAAGCGGGAGGAGCGAACACTGAGATCCTGCAATTGGACAGGCATGAAGTACGTGGGGCGAGCGCTGAGGAGACCCTGCCAATTGGACAAGAGAGAGAAGTGGGCGGAGTAAGCATTGGTAGAGCCTGCTGATTGGGCAAGAGACAGGAGTGGTAGGAGCAAGGACTGCGGAGAAGGCTGCTATTGGATGTTACGGAGAAGAGGGCGGAACAAGAAGGTGGAGAGCTCTGCAGATTGGACAGGAGAGATAAGCAGGAGGAGCCAGCAATGAATGGAGCCAGCGGTGAAAAGAGCCCTGACAATTAGACAGGGGAGAGCAGTGGAACCAGAATTAGGGTAATGGTCAGGGTGACAGCCAGAAAGGAAATTCCAGCAGGGATGCCCACCGCACCAACCCAAAGCTATGACCCGCGTCCTAACCCACCCTAACTCAGCCAAAACCGAACTCCAAACCCTGACTAAATGCAAAATGctgacccggacccggaactggacctagtgcgaacccaagcctgaaccctaacccctaacccatggcccctaat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 8928 734 + 80904711 AGCCTGCGTTTCCGTTTCCCGGAGAGACCCCGGGCTCCCTCCTCCGAGGACAGGAACGCAACGCACTGGCAGAGCTCGCGGATTGGCTGGGGGAGAGAAGTGGGCGGAGTGAGCACTAGGAGATGCTGTCATTATATAAGAAAGAGAAGTGGGCAGTGTGGGCACCGGGTAGAG--CC-TGCTGGGTGGATAGGAGCGAGAAGCAGGCGGAGCTGGCACTGAGATCCTGCAATTGGACAGGCGTGAAGTGGGTGGGGCGAGCACTGAGGAGACCCTGCCAATTGGACAAGAGAGAGAAGTGGGCGGAGTGAGCATTGGTAGAGTCTGCTGATTGGGCAAGAGACAGGAGTGGTAGGAGCAAGGACTGCAGAGAAGGCTGCTATTGGATGTTAGGGAGAAGAGGGCGGAACAAGAAGGTGGAGAGCTCTGCCGATTGGACAGGCGAGATAAGTAGGAGGAGCGAGCAATGAATGGAGCCAGCCCTGAAAAGAGCCCTGACAACTGAACAGGCGAGAGCAGTGGAACCAGAATTAGGGTTACGGTCACGGTGACAACCAGAAAGGAAATTACAGCAGGGATGCCCACCGCACCAACCGAAAACTATGACCCGAGTCCTAACCCGCCCTAACCCAGCCAAAACCAAACTCCAAACCCTCACTAAATGAGAAACGCTGACCCAGACCCAGACCTGGACCTAGTGCGACCCCAAGCGTGaaccctaacccctaa-------cccctaac i rheMac3.chr16 N 0 I 7 s macFas5.chr16 8835 734 + 80997621 AGCCTGCGTTTCCGTTTCCCGGAGAGACCCCGGGCTCCCTCCTCCGAGGACAGGAACGCAACGCACTGGCAGAGCTCGCGGATTGGCTGGGGGAGAGAAGTGGGCGGAGTGAGCACTAGGAGATGCTGTCATTATATAAGAAAGAGAAGTGGGCAGTGTGGGCACCGGGTAGAG--CC-TGCTGGGTGGATAGGAGCGAGAAGCAGGCGGAGCTGGCACTGAGATCCTGCAATTGGACAGGCGTGAAGTGGGTGGGGCGAGCACTGAGGAGACCCTGCCAATTGGACAAGAGAGAGAAGTGGGCGGAGTGAGCATTGGTAGAGCCTGCTGATTGGGCAAGAGTCAGGAGTGGTAGGAGCAAGGACTGCGGAGAAGGCTGCTATTGGATGTTAGGGAGAAGAGGGCGGAACAAGAAGGTGGAGAGCTCTGCCGATTGGACAGGCGAGATAAGTAGGAGGAGCGAGCAATGAATGGAGCCAGCCCTGAAAAGAGCCCTGACAACTGAACAGGCGAGAGCAGTGGAACCAGAATTAGGGTTACGGTCACGGTGACAACCAGAAAGGAAATTACAGCAGGGATGCCCACCGCACCAACCGAAAACTATGacccgagtcctaacccgccctaacccagccaaaaccaaactccaaaccctcactaaatgagaaacgctgacccagacccagacctggacctagtgcgaccccaagcgtgaaccctaacccctaa-------cccctaac i macFas5.chr16 C 0 I 7 s papAnu2.chr16 21219 735 + 74645514 AGCCTGCGTTTCCGTTTCCCGGAGAGACCCCGGGCTCCCTCCTCCGAGGACAGGAACGCAACGCACTGGCAGAGCTCGCGGATTGGCTGGGGGAGAGAAGTGGGCGGAGTGAGCACTAGGAGATGCTGTCATTGGATAAGAAAGAGAAGTGGGCAGGGTGGGCACCGGGTAGAG--CCTTGCTGGATGGATAGGAGTGAGAAGCAGGCGGAGCTGGCACTGAGATCCTGCAGCTGGACAGGCATGAAGTAGGTGGGGCGGGCACTGAGGAGACCCTGCCAATTGGACAAGAGAGAGAAGTGGGCGGAGTGAGCATTGGTAGAGCCTGCTGATTGGGCAAGAGACAGGAGTGGTAGGAGCAAGGACTGCGGAGAAGGCTGCTATTGGATGTTAGGGAGAAGAGGGCGGAACAAGAAGGTGGGGAGCTCTGCCGATTGGACAGGCGAGATAAGTAGGAGGAGCGAGCAATGAATGGAGCCAGCCCTGAAAAGAGCCCTGACAACTGAACAGGGGAGAGCAGTGGAACCAGAATTGGGGTTACGGTCACGGTGACAACCAGAAAGGAAATTACAGCAGGGATGCCCACCGCACCAACCGAAAACTATGACCCGAGTCCTAACCCACCCTAACCCAGCCAAAACCAAACGCCAAACCCTCACTAAATGTGAAACGCTGACCCGGACCCACacctggacctagtgcgaccccaagcgtgaaccctaacccctga-------cccctaac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 13791 729 + 75148670 AGCCTGCGTTTCCGTTTCCCGGAGAGACCCCGGGCTCCCTCCTCCAAGGACAGGAACGCAACGCACTGGCAGAGCTCGCGGATTGGCTGGGGGAGAGAAGTGGGCGGAGTGAGCACTAGGAGATGCTGTCATTGGAT----AAGAGAAGTGGGCAGGGTGGGCACCGGGTAGAG--CC-TGCTGGGTGGATAGGAGCGAGAAGCAGGGGGAGCTGGTGCTGAGATCCTGCAATTGGACAGGCATGAAGTAGGTGGGGCGGGCACTGAGGAGACCCTGCCAATTGGACAAGAGAGAGAAGTGGGCGGAGTGAGCATTGGTGGAGCCTGCTGATTGGGCAAGAGACAGGAGTGCT-GGGGCAAGGACTGCGGAGAAGGCTGCTATTGGATGTTAGGGAGAAGAGGGCGGAACAAGAAGGTGGAGAACTCTGCCAATTGGACAGGCGAGATAAGTAGGAGGAGCGAGCAATGAATGGAGCCAGCCGTGAAAAAAGCCCTGACAACTGAACAGGGGAGAGCAGTGGAACCAGAATTAGGGTTACGGAAACGGTGACAACCAGAAAGGAAATTACAGCAGCGATGCCCACCGCACCaacccaaaactatgacccgagtcctaacccaccctaacccagccaaaaccaaactccaaaccctcactaaatgtgaaacgctgacccggacccacacctggacctagtgcgaccccaagcctgaaccctaacccctaa-------cccctaat i chlSab2.chr16 N 0 C 0 a score=312769.000000 s hg38.chr17_GL383563v3_alt 82674 158 + 375691 cctgatcctagaccctaaccccgaccctaaaccctgaccctgaccctgaAGGGGGACATAGAGGAAAGAGATTGAGAGGTTTGCATATTCAATGACATACATTTTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTTTATCTC--GAGAAATT----TCTGAC s panTro4.chr17 74324 123 + 82630442 ------------------------------accctgaccctgaccctgaAGGGGGACAT-----AAAGAGATTGAGAGGTTTGCACATTCAGTGACATACATTTTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTTTATCTC--GAGAAATT----TCTGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3469346 160 - 17838096 cctgatcctagaccctaatcccgaccctaaaccctgaccctgaccctgaGGGGGGACATAGAGGAAAGAGATGGAGAGGTTTGCCCATTCAGTGACATACATTTTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTTTATCTCTTGAGAAGTT----TCTGAC i ponAbe2.chr17_random N 0 C 0 s nomLeu3.chr19 36446 160 - 81552678 cctgatcctagaccctaaccccgaccctaaaccctgacgctgaccctgaGGGGAGACATAGAGGAAAGAGATGCAGAGGTTTGCACATTCAGTGACGTACATATTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTTTATCTCTTGAGAAGTT----TCTGAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 9669 151 + 80904711 cctgatcctagacccta-------------accctgaccctgaccctGAGGGGAGACATAGAGGAAAGAGATTGAGAGGTTTGCACATTCAGTGACATACATTTTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTGTATCTCTTGAGAAGTTTCTATCTGAC i rheMac3.chr16 I 7 C 0 s macFas5.chr16 9576 151 + 80997621 cctgatcctagacccta-------------accctgacgctgaccctGAGGGGAGACATAGAGGAAAGAGATTGAGAGGTTTGCACATTCAGTGATATACATTTTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTGTATCTCTTGAGAAGTTTCTATCTGAC i macFas5.chr16 I 7 C 0 s papAnu2.chr16 21954 139 + 74645514 ------------cccta-------------accctgaccctgaccctgaggGGAGACATAGAGGAAAGAGATTGAGAGGTTTGCACACTCAGTGACATACATTTTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTGTATCTCTTGAGACGTTTCTATCTGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 14520 151 + 75148670 cctgatcctacacccta-------------accctgaccctgaccctGAGGGGAGACATAGAGGAAAGAGATTGAGAGGTTTGCACATTCAGTGACATACATTTTCTTCGTTAGTCGATGTTAGAAAGCAAAGGCTTGTATCTCTTAAGAAGTTTCTATCTGAC i chlSab2.chr16 C 0 C 0 a score=278883.000000 s hg38.chr17_GL383563v3_alt 82832 214 + 375691 CTAAAGAATGATGTAC-AATAAACTGTATTCAACAATTGATCAA--CATTTTCTAACAAGGTGGAATGAAAATATAAAGTGTGGGGATTGCTACTAGTCCTAAT-ACACTAATC-TGTGGTTAGGAAGGTTTATTTTTTT-CCCTC--CAAACCTAAGCAGTACATGTCTTAAATTACCTTCCAAAACGTAAGACTCTTGGAGCCTCAGAC--GGGCTGGCGTT-- s panTro4.chr17 74447 214 + 82630442 CTAAAGAATGATGTAC-AATAAACTGTATTCAACCATTGATCAA--CATTTTCTAACAAGGTGGAATGAAAATATAAAGTGTGGGGATTGCTACTAGTCCTAAT-ACACTAATC-TGTGGTTAGGAAGGTTTATTTTTTT-CCCTC--CAAACCTAAGCAGTACATGTCTTAAATTACCTTCTAAAATGTACGACTCTTGGAGCCTCAGAC--GGGCTGGCGTT-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3469506 215 - 17838096 CTGAAGAATGATGTAC-AATAAACTATATTCAACAATTGATCAA--CATTTTCTAACAAGGTGGAATGAAAATAT--AGTGTGGAGATTGCTACTAGTCCTCAT-ACACTTATC-TGTGGTTAGGAAGGTTTATTTTTTTCCCCTC--AAAACCTAAGCAGTACATGTCTTAAGTTACCTTCCAAAATGTAAGACTCTTGGAGCCTCAGAC--AGGCTGGCGTTAG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 36606 216 - 81552678 CTGAAGAATGATGTAC-AGTAAACTGTATTCAACAACTGATCAA--CATTTTCTAACAAGGTGGAATGAAAATATAAAGTGTGGAGATTGCTACTAGTCCTCAT-ACACTTATC-CGTGGTTAGGAAGGTTTTTTTTTTC-CCCTC--GAAACCTAAGCAGTACATGTCTTAAATTACCTTCCCAAATTTAAGACTCTTGGAGCCTCAGAC--CGGCTGGCGTTAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 9820 139 + 80904711 CTAAAGAATGATGTAC-AATAAAC--TATTCAATAA-----------------------------------------ACTGT-------------------------------------ATTAGGAAGGT---TTTCTCC-CCCTC--AAAACCTACACAATACGTGTCTTAAAGTACCTTCCAACATTTAACTCCCTTGGAGAcccagacaggggctggcgtttg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 9727 139 + 80997621 CTAAAGAATGATGTAC-AATAAAC--TATTCAATAA-----------------------------------------ACTGT-------------------------------------GTTAGGAAGGT---TTTCTCC-CCCTC--AAAACCTACACAATACGTGTCTTAAAGTACCTTCCAACATTTAACTCCCTTGGAGACCCAGACAGGGGCTGGCGTTTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 22093 139 + 74645514 CTAAAGAATGATGTGC-AATAAAC--TATTCAATAA-----------------------------------------ACTGT-------------------------------------GTTAGGAAGGT---TTTCTCC-CCCTC--AAAACCTACACAATACGTGTCTTAAAGTACCTTCCAACATTTAACTCCCTTGGAGACTCAGACAGGGGCTGGCGTTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 14671 141 + 75148670 CTAAAGAATGATGTAC-AATAAACTGTGTTCAACAA-----------------------------------------ACTGT-------------------------------------GTTAAGAAGGT---TTTTTCC-CCCTC--AAAACCTACACAATACGTGTCTTAAAGTACCTTCCAACATTTAACTCCCTTGGAGACTCAGACAGGGGCTGGCGTTTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 827906 219 - 1291538 CTAAAGAATGTTATACAAATAAACTGT-CTCAACGATTGGTCGAACAATTTCCTAACAGGGTGGATGGAGAATATT-AAAGTAGGGATGGTTA-TAGTCCTCATCCCACTTATCTTATGGATAGGAAGTT---TATATTC-TCCTCAAAAAACCTAAGTAGTACATGTGTTAAATTACCTTCCAAATTTCAAGACTCTTGGCGCCTCAGACAGGGACTAGGATTAG i calJac3.chrUn_GL286409 N 0 C 0 a score=824489.000000 s hg38.chr17_GL383563v3_alt 83046 259 + 375691 AGTCAA--TACTCCACGGCTGTTTGTTGGATGAGTGGACAACAGCATGGTCGACAGGTCCTGGTGCAAAATGTCTTG-------ggctgcctcagtttgaatcctgcttctgccatcgaccagccgtgtgatt----ctgtaaaagtattttaacctctctgggccttagtttccccatctgtaacttgagggcctacctcaaatgggtccctggtgaagagt--aaCAAGACTATATCCGGAGTAGGTTTCAGTTGCCTTTTCCTCCGTCTTT s panTro4.chr17 74661 259 + 82630442 AGTCAA--TACTCCACGGCTGTTTGTTGGATGAGTGGACAACAGCATGGCCGACAGGTCCTGGTGCAAAATGTCTTG-------ggctgcctcagttttaatcctgcttctgccatcgaccagccgtgtgatt----ctgtaaaagtattttaacctctctgggccttagtttccccatctgtaacttgagggcctacctcaaatgggttcccggtgaagagt--aaCAAGACTATATCCGGAGTAGGTTTCAGTTGCCTTTTCCTCCGTCTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3469721 259 - 17838096 AGTCAA--TACTCCACAGCTGTTTGTTGGATGAGTGGACAACAGCATGGCCGACAGGTCCTGGTGCAAAAAGTCTTG-------ggctgcctcagtttgaatcctgcttctgccatcgaccagccgtgtgatt----ctgtaaaagtattttaacctctctgggccttagtttccccatctgtaacttgagggcctacttcaaatgggttcttgctgaagagt--aaCAGGACTATATACGGAGTAGGTTTCAGTTGCCTTTTCCTCCATCTTT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 36822 255 - 81552678 AGTCAA--T--------GCTGTTTGTTGGATGAGTGGACAACAGCATGGCCACCAGGTCCTGGTGCAAAAAGTCTTG-------ggctgcctcagtttgaatcctgcttctgccatcgaccagccgtgtgattgatgctgtaaaagtattttaacctctctgggccttagtttccccatctgtaacgtgagggcctacctcaaatgtgttcctggtgaagagt--aaCAAGACTATATCCGGAGTAGGTTTCAGTTGCCTTTTCCTCCGTCTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 9959 259 + 80904711 agtcaa--tactccacagctgtttggtggatgaatggaCAACAGCACGGCCAACAGGTCCTGGTGCAAAAAGTCTTG-------GGTggcctcagtttgaatcctgcttctgccatcgaccagccgtgtgatt----cggtacaagtattttaacctctctggtccgcagtttccccatctgtaacttgaggtcctacctcaaatgggtgcctggtgaagagt--aaCAAGACTATATCCGGAGTAGGTTTCAGTTGCCTTTTCCTCCGTCTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 9866 259 + 80997621 AGTCAA--TACTCCACAGTTGTTTGGTGGATGAGTGGACAACAGCACGGCCAACAGGTTCTGGTGCAAAAAGTCTTG-------GGTggcctcagtttgaatcctgcttctgccatcgaccagccgtgtgatt----cggtacaagtattttaacctctctggtccgcagtttccccatctgtaacttgaggtcctacctcaaatgggtgcctggtgaagagt--aaCAAGACTGTATCCGGAGTAGGTTTCAGTTGCCTTTTCCTCCGTCTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 22232 259 + 74645514 AGTCAA--TACTCCACAGCTGTTTGGTGGATGAGTGGACAACAGCACGGCCAACAGGTCCCGGTGCAAAAAGTCTTG-------GGTGGCCTCAGTTTGAATCCTGCTTCTGCCATCGACCAGCCGTGTGATT----CGGTACAAGTATTTTAACCTCTCTGGTCcgcagtttccccatctgtaactTGAGGGCCTACCTCAAATGGGTGCCTGGTGAAGAGT--AACAAGACTATATCCGGAGTAGGTTTCAGTTGccttttcctccgtcttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 14812 259 + 75148670 AGTCAA--TACTCCACAGCTGTTTGGTGGATGAGTGGACAACAGCACGGCCAacaggtcctggtgcaaaaagtcttg-------ggtagcctcactttgaatcctgcttctgccatcgaccagccgtgtggtt----ctgtacaagtattttaacctctctggtccgcagtttccccatctgtaacttgagggcctacctcaaatgggttcctggtgaagagt--aaCAAGACTATATCCGGAGTAGGTTTCAATTGCCTTTTCCTCCGTCTTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 828125 253 - 1291538 AGTCAAACCACTCCACAGCTGTTTGTTGCATGAGTGCACAATAGCATGGCCAACATGTCATGGTGAAAAAAGTCTTG-------TGCAGCTTCCAttcaaattctgcttctgccattgaccagccatgtgatt----ccgcacaagtattttaaccttattgggcctcagtttccccatctgtaacttggggGCCTACATCAAATGGGTTCCTGGTGAATAAC--AACAAGACTGTATT--------GTTTCAGTTGCCTTTTCCTCCGTCTTT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15585138 258 - 61074082 AGTTAA--TACTCCACAGCTGTTTGCTGAGC-AGTAGATGacagcatggcatagtgatcctgatataaa--gtcttgggggggagggggcattagtt-gaatcctggtcgtgtcacttaccagctgtgtggtt----cagc-caaata-tttaacttctctgag-tttagtttttccatctgtaactccaga-cctacctctcatgagttcttggtgaagagttaaaggagacaacgTGCTGCGTGAGCCT--GTTGCCATTCTCTCGCTCTTT i canFam3.chr9 N 0 C 0 a score=6152.000000 s hg38.chr17_GL383563v3_alt 83305 2 + 375691 CC s panTro4.chr17 74920 2 + 82630442 CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3469980 2 - 17838096 CC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37077 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 10218 2 + 80904711 CC i rheMac3.chr16 C 0 I 38 s macFas5.chr16 10125 2 + 80997621 CC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 22491 2 + 74645514 cc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 15071 2 + 75148670 CT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 828378 2 - 1291538 CC i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15585396 0 - 61074082 C a score=53362.000000 s hg38.chr17_GL383563v3_alt 83307 36 + 375691 ACCCTCCCCTCCTACCCTTCCAAATC-tttttttttt s panTro4.chr17 74922 37 + 82630442 ACCCTACCCTCCTACCCTTCCAAAtcttttttttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3469982 36 - 17838096 ACCCTCCCCTCCAACCCTTCCAAAtc-tttttttttt i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37079 37 - 81552678 ACCCTCCCCTCCAACCCTTCCAAATCttttttttttt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 10127 35 + 80997621 -CCCTCCCCTCCATCCCTTACAAATC-CTTCCCCCCC i macFas5.chr16 C 0 I 2 s papAnu2.chr16 22493 35 + 74645514 -ccctcccctccaacccttacaaatc-cttcccccca i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 15073 35 + 75148670 -CCCTCCCCTCCAACCCTTACAAATC-CTTTTTTTCC i chlSab2.chr16 C 0 I 7 s calJac3.chrUn_GL286409 828380 31 - 1291538 ACTCTCCCCTCCAAGttct-----tt-tttttttttt i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15585396 0 - 61074082 C e rheMac3.chr16 10220 38 + 80904711 I a score=772252.000000 s hg38.chr17_GL383563v3_alt 83343 298 + 375691 ttttttgacaaggtctccctctgttgcccaggctggagtgcggtggcgtgatctcggctcactgcaatccccactttccaggctcaagcgatcctcctcctcctacctcagcctcctgaaaagctggggctacaggtgtgtgccaccacgctaggctaa-ttgtcattg------tgtgtgtc-------------------------------------tctgtgtgtgtagaggcgtggtttctccatgttgaccaggctggtctcgaactccaggcctcaagcaattctcccacctcgacctccaaaagtgctaggacttacaggcgtgagccaccgcc s panTro4.chr17 74959 288 + 82630442 ttttttgacagggtctccctctgttgcccaggctggagtgcagtggcgtgacctcggctcactgcaatccccactttccaggctcaagcgatcctcctcctcctacctcagcctcctgaatacctggggctacaggtgtgtgccaccacgctaggctaa-ttgtgattg------tatgtgtt-----------------------------------------------tagaggcatggtttatccatgttgaccaggctggtctcgaactccaggcctcaagcaattctcccacctcgacctccaaaagtgctaggacttacaggcgtgagccaccacc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470018 314 - 17838096 ttt----acagggtctccctctgttgcccaggctggagtgcagtggcatgatctcggctcactgcaatccccgctttccaggctcaagcgatcctccttctcctacctcagcctcctgaatagctggggctacatgtatgtgcaaccacgctaggctaa-ttgtcatcg------tgtgtgtgtgtgtgtgtgtgtgtgtgt-----------------gtgtgtgtgtgtgtagacgtggtttctccatgttgaccaggctggtctcgaactccaggcttcatgcaattctcccacctccacctccgaaagtgctaggacttacaggcgtgagccaccgcc i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37116 300 - 81552678 ttttttgacagggtctccctctgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaatccccactttccaggctcaagagaccctcctcctcctacctcagcctcctgaatagctggggcgacaggtgtgtgccaacacgctaggc-----tgtcactg------cgtgtgtg--------------tgtgt-----------------gtgtgtgtgtgtagagatgtggtttctccatgttgaccaggctggtctcgaactccaggcctcaagcaattctcccacctcgacctccaaaagtgctaggacttacaagcgtgagccaccgcc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 10258 304 + 80904711 CCCCCCTacagggtctccctctgttgcccaggctggagtgcagtggcatgatcttggctcactgcaatccccacttcccaggctcaagcaatcttcctcctcctacctcatccttccgaatagctggagctacaggtgtgtgccactatgccaggctaa-ttgtcattt------tgtgtgtg--------------tgtgt-----------------gtgtgtgtgtgtggagacagggtgtctccatgttgaccaggctgctctcaaactcctggcctcaagcaatcctcccacctcgacctccaaaagtgctaagacttacaggcgtgagccaccgcc i rheMac3.chr16 I 38 C 0 s macFas5.chr16 10164 304 + 80997621 CCCCCCCacagggtctccctctgttgcccaggctggagtgcagtggcatgatcttggctcactgcaatccccacttcccaggctcaagcaatcttcctcctcctacctcatccttccgaatagctggagctacaggtgtgtgccactacgccaggctaa-ttgtcattt------tgtgtgtg--------------tgtgt-----------------gtgtgtgtgtgtggagacagggtgtctccatgttgaccaggctgctctcaaactcctggcctcaagcaatcctcccacctcgacctccaaaagtgctaagacttacaggcgtgagccaccgcc i macFas5.chr16 I 2 C 0 s papAnu2.chr16 22529 296 + 74645514 cccccctacagggtctccctctgttgcccaggctggagtgcagtggcatgatcttggctcactgcaatccccacttcccaggctcaagcaatcttcctcctcctacctcatcctcccgaatagctggagctacaggtgtatgccactacgccaggctaa-tggtcattt----------------------------tgtat-----------------gtgtgtgtgtgtggagacagggtgtctccatgttgaccaggctgctctcaaactcctggcctcaagcaatcctcccacctcgacctccaaaagtgctaagacttacaggcctgagccaccgcc i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 15115 310 + 75148670 CCCACCCacaggttctccctctgttgcccaggctggagtgcagtggcatgatcttggctcactgcaacccccacttcccaggctcaagcaatcttcctcctcccacctcagcctcccgaatagctggagctacaggtgtgtgccactacgccaggctaa-ttgtcattgtgtgtgtgtgtgtg--------------tgtgt-----------------gtgtgtgtgtgtggagacagggtgtctccatgttgaccaggctagtctcaaactcctggcctcaagcaatcctcccacctcgacctccaaaagtgctaagacttacaggcgtgagccaccgcc i chlSab2.chr16 I 7 C 0 s calJac3.chrUn_GL286409 828411 314 - 1291538 tttttttttatagtctccctctgttgcccaggttggcgcacagtggcatgatctcaactcactgtaacctccacgccccaggttcaagagacc------ctcctacctctgcctccaaaatagctggggctacaggtgtgttccaccatgccaggctaatttgtcagag------agtatgtg--------------tgtacagaccacaccaggctaagtatgtgtgtgtaaagatgggttttctccatgttgaccaggctggtctcgaa--actggccttaagcacacttcccgcctcaacttccaaaagtactaggacttacagacatgagccactgcc i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15585396 0 - 61074082 C a score=10465.000000 s hg38.chr17_GL383563v3_alt 83641 5 + 375691 cccA-C s panTro4.chr17 75247 6 + 82630442 cccACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470332 6 - 17838096 cccACC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37416 6 - 81552678 cccACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 10562 6 + 80904711 cccACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 10468 6 + 80997621 cccACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 22825 6 + 74645514 cccacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 15425 6 + 75148670 cccACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 828725 2 - 1291538 c----c i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15585396 5 - 61074082 -CCGGC i canFam3.chr9 C 0 C 0 a score=1176067.000000 s hg38.chr17_GL383563v3_alt 83646 286 + 375691 CCCTTCA--AATCTATTAAAAGGTGAGAGTCTCGCCAAGGCAATGAGATCGCAATATGACGTTTCCATTTACTTTGGATTATATGTCATTATAAATATTAACAAATAAGACTTAAAAAGGACACCTTCGGGTAGGTCAGACCAAAATACAAAACTTGTC-T-GTGGGACTGCAGTTTGAGGACAG------------TGTCTGCAGCCGTCACATGGCAGCAAAACGGGGTTAAGCAGTGCACGAGAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA s panTro4.chr17 75253 298 + 82630442 CCCTTCA--AATCTATTAAAAGGTGAGAGTCTCGCCAAGGCAATGAGATCGCAATATGACGTTTCCATTTACTTTGGATTATATGTCATTATAAATATTAACAAATAAGACTTAAAAAGGACACCTTCGGGTAGGTCAGACCAAAATACAAAACTTGTC-T-GTGGGACTGCAGTTTGAGGACAGTGTCTGCAACATTGTCTGCAGCCGTCACATGGCAGCAAAACGGGGTTAAGCAGTGCACGAGAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470338 286 - 17838096 CCCTTCA--AATCTATTAAAAGGTGAGAGTCTCGCCAAGGCAATGAGATCGCAATATGATGTTTCCATTTACTTTGGATTATATGTCATTATAAATATTAACAAATAAGACTTAAAAAGGACACCTTCGGGTAGGTCAGACCAAAGTACAAAACTTGTG-T-GTGGGACTGCAGTTTGAGGACAG------------TGTCTGCAGCCGTCACATGGCAGCAAAACGGTGTTAAGCAGTGCACGAGAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37422 279 - 81552678 CCCTTCA--AATCTATTAAAAGGTGAGAGTCTCGCCAAAGCAATGAGATCGCAATATGATGTTTCCATTTACTTTGGATTATATGTCATTATAAATATTAACAAATAAGACTTAAAAAGGACACCTTCGGGTAGGT-----CAAAGTACAAAACCTGTG-T-GTGGGACTGCAGTTTGAGGACAG------------TGTCTGCAGCCGTCACATGGCAGCAAAACGGTGTTAAGCAGTGCAC--GAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 10568 286 + 80904711 CCCTTCA--AATCTATTACAAGGTGAGCGTCTCGCCAAGGCAATGAGATCGCAATATGATGTTTCCATTTACTTTGGATTATATGTCATTATAAATATTAACAAATAAGACTCCAAAAGGACACCTTCGGGTAGGTCAGACCAAAGTACAAAACTTGTG-T-GTGGGGCTGCAGTTTGAGGGCAG------------TGTCTGCAGCCGTCACATTGTAGCAAAACGGTGTTAAGCAGTGCACGAGAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA i rheMac3.chr16 C 0 M 480 s macFas5.chr16 10474 286 + 80997621 CCCTTCA--AATCTATTACAAGGTGAGCGTCTCGCCAAGGCAATGAGATCGCAATATGATGTTTCCATTTACTTTGGATTATATGTCATTATAAATATTAACAAATAAGACTCCAAAAGGACACCTTCGGGTAGGTCAGACCAAAGTACAAAACTTGTG-T-GTGGGGCTGCAGTTTGAGGGCAG------------TGTCTGCAGCCGTCACATTGTAGCAAAACGGTGTTAAGCAGTGCACGAGAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 22831 286 + 74645514 cCCTTCA--AATCTATTACAAGGTGAGCGTCTTGCCAAGGCAATGAGATCGCAATATGATGTTTCCATTTACTTTGGATTATATGTcattataaatattaacaaataagaCTCAAAAAGGACACCTTCGGGTAGGTCAGACCAAAGTACAAAACGTGTG-T-GTGAGGCTGCAGTTTGAGGGCAG------------TGTCTGCAGCCGTCACATGGTAGCAAAACGGTGTTAAGCAGTGCACGAGAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 15431 286 + 75148670 CCCTTCA--AATCTATTACAAGGTGAGCGTCTCGCCAAGGCAATGAGATCGCAATATGATGTTTCCATTTACTTTGGATTATACGTCATTATAAATATTAACAAATAAGACTCAAAAAGGACACCTTCGGGTAGGTCAGACCAAAGTACAAAACTTGTG-T-GTGGGGCTGCAGTTTGAGGGCAG------------TGTCTGCAGCCGTCACATGGTAGCAAAACGGTGTTAAGCAGCGCACGAGAGCCTGCGTCGACCACAGCCAGAGTCCATGCATCGGGAGGTTCACTCGGTTTGCGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 828727 285 - 1291538 ACCACCA--AATCTATTAAAA--CAAGAGTCTCACCAAGACAATGAAATTGCAATGTGACGTTTCTGTTTACTTTGGATTATATGTCGTTATAAATATTAACAAATAAGACTTTAAAAGGACACCTTTGGGTGGGTCAGACCAAAGTACAAAACTTGTGTT-GTGGGGCTGTAGTTTGAGGACAG------------TGTCTGCAGCCTTCACATGGTAGCAAAACAGTGTTAAGCAGCGCACGAAAGTCTGCGTCGGCGACAGCCACAGTCCATGCATCGGGAGGTTCGCTTGCTTGGCGA i calJac3.chrUn_GL286409 C 0 I 4 s mm10.chr11 75769048 274 + 122082543 CCCCCCA--GATCTTCCAAGGAGT-------TTCCCAAGCTAGTGCGACCTCAGTACGACGTTCTCATTTACTTT-GATTATATATCGTTATAAATATTAACAAATAAGACTTAAAAAGGACACCTTTGGGAAGGTCAGACAAGATTACAAAAATTGTT-TCGTGGCGCTGCAGTTTGAGGATGT------------ATTCTGCAGTCGTCACGTGGCAGCAAAACTG---TAAGCAGTGCAC--GAGTCCGTGTCGAGGACAGCCAGAGTCCATGCATCGGGAGATTCACTTGGCTGGAGA i mm10.chr11 N 0 C 0 s canFam3.chr9 15585401 281 - 61074082 CCTTTCATCAATCTGTTTAAAG----CAGTCTC-CCAAACAAATGCCATTGCAGTG-AACGTTTTCATTTATTTTGAATTACAGGTCATTATAAATATTAGCAAATAAGACTTAAAAAGGACACCCTCGAGTAGGTCAGACATAAGTACAAAAATTGTG-T-GTGGGGCTGCAGTTTAAGGACAT-----------TTTTCTGCAGCCGCCACATGGTAGCAAAACGGTGGTAAGCAGTGCAC--GAGTCTGCGTCGACGACAGCCAGAGTCCATGCATCGGGAGGTTCTCTCGGTTTGAGA i canFam3.chr9 C 0 C 0 a score=365082.000000 s hg38.chr17_GL383563v3_alt 83932 133 + 375691 AGGAACAACGGGCTCGGCATGCACGGCCCGGGCTC----GGCGGGCGGACGGGCCGG---------------GGCGCAGTTCCCCGCGCTCGCCACTAGAGGTCAGGAGGTGACCGCTTCGGGGCTGGAAGACGGGCCCG-TCGGGGATTggc s panTro4.chr17 75551 133 + 82630442 AGGAACAACGGGCACGGCATGCAcggcccgggctc----ggcgggcggacgggccgg---------------ggcgcAGTTCCCCGCGCTCGCCACTAGAGGTCAGGAGGTGACCGCTTCGGGGCTGGAAGACGGGCCCG-TCGGGGATTGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470624 125 - 17838096 AGGAACAATGGGCAGGTCATGCACGGCCCGGGCTC----CGCGGGCGGACAA-----------------------GCAGTTCCCCGCGCTCGCCACTAGAGGTCAGGAGGTGACCGCTTCGGGGCTGGAAGACGGGCCCG-TCGGGGATTGGC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37701 133 - 81552678 AGGAACAACGGGCAGGGCATGCACGGCCCGGGCTC----GGCGGGCGGATAGGCCGG---------------GGCGCAGTTCCCCGCGCTCGCCACTAGAGGTCAGGAGGTGACCGCTTCGGGGCTGGAAGACGGGCCCG-TCGGGGATTGGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 10760 133 + 80997621 ----AGAACGGGCAGGGCATGCACGGCCTGGGTTCggcgggcgggcgggcgggccgg---------------GGCGCAGTTCCCCAGGTTCGCCACTAGAGGTCAGGAGGTGACCGCTTCGGGGCTGGAAGACGGGCCCG-TCGGGGATTGGC i macFas5.chr16 C 0 I 4 s papAnu2.chr16 23117 129 + 74645514 ----AGAACGGGCAGGGCATGCACGGCCTGGGCTC----GGCGGGCGGACGGGCCGG---------------GGAGCAGTTCCCCAGGTTCGCCACTAGAGGGCAGGAGGTGACCGCTTCGGGGCTGGAAGACGGGCCCG-TTGGGGATTGGC i papAnu2.chr16 C 0 I 4 s chlSab2.chr16 15717 133 + 75148670 ----AGAAcgggcagggcatgcacggcctgggctcggcgggcgggcgggcgggccgg---------------GGCGCAGTTCCCCAGGTTCGCCACTAGAGGTCAGGAGGTGACCGCTTCGGGGCTGGAAGACGGGCCCG-TCGTGGATTGGC i chlSab2.chr16 C 0 I 142 s calJac3.chrUn_GL286409 829016 123 - 1291538 ACGAACCATGGGCAGGGCATGCACGGCCTGGGCTC----GGCGGGCGG------------------------GGCGCAGTTCCCT-CACTCGCTATTAGAGGCCGGTAGGTGACTGCTTAGGGGCTGGATGTCGGGCCCG-TTGGGGACTGGC i calJac3.chrUn_GL286409 I 4 I 43 s mm10.chr11 75769322 146 + 122082543 -AGGACGGAGGGCAGG--ACGCTTGGCCCGAGCTC----ggcgggcgggcgggcgggcgggcgggcCACGGAGGTGCAGTTCCTCATTTTTGCCACTAGAGGTCAGGAGGTCACTGACTCTGGGTTGGAAGACGGGACTGTTCAGGGATTGGC i mm10.chr11 C 0 I 4 s canFam3.chr9 15585682 109 - 61074082 ----AGAAACGGTAGGACATGCACGGGCCGGGA---------------------------------------GGTGCAGTTTCTCGCTCCTGCCACTAGGGGTCAGGAGGTGGCCGCCTCAGGGCTGGGAGGTGGGCCCG-TCTGGGATTGGC i canFam3.chr9 C 0 C 0 e rheMac3.chr16 10854 480 + 80904711 M a score=-11156.000000 s hg38.chr17_GL383563v3_alt 84065 17 + 375691 ----gcaggcggcgggcg-----ggg s panTro4.chr17 75684 5 + 82630442 ----GCA-----------------gg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470749 5 - 17838096 ----GCT-----------------GG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37834 5 - 81552678 ----GCT-----------------GG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 10897 17 + 80997621 ----GCCGGCGGAgggcg-----ggg i macFas5.chr16 I 4 C 0 s papAnu2.chr16 23250 17 + 74645514 ----GCCGGTggagggcg-----ggg i papAnu2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 829182 19 - 1291538 -------GGAGGTGACCGCTTCAGGG i calJac3.chrUn_GL286409 I 43 I 5 s mm10.chr11 75769472 17 + 122082543 ----GGTGGTGGAGGGCG-----GGG i mm10.chr11 I 4 I 7 s canFam3.chr9 15585791 18 - 61074082 TAGCGGCGGCGGGAGGCG-------- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 15850 142 + 75148670 I e rheMac3.chr16 10854 480 + 80904711 M a score=21948.000000 s hg38.chr17_GL383563v3_alt 84082 27 + 375691 cgg-----cgggcggg-----------------------gcggcgggcggggcgg--------- s panTro4.chr17 75689 27 + 82630442 cgg-----cgggcggg-----------------------gcggcgggcggggcgg--------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470754 27 - 17838096 CGG-----CGGGCGGG-----------------------GCGGAGAGCGGGGCGG--------- i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37839 27 - 81552678 Cgg-----cgggcggg-----------------------gcggagagcggggcgg--------- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 10914 32 + 80997621 cggagagtggggcggg-----------------------gcggagagcggggcgg--------- i macFas5.chr16 C 0 M 100 s papAnu2.chr16 23267 44 + 74645514 cggagagcggggcggggcgg-----------ggcggagagcggagggcggggcgg--------- i papAnu2.chr16 C 0 I 65 s chlSab2.chr16 15992 24 + 75148670 CGG-----GGGGCGGG-----------------------GCGGAGGGCGGGG------------ i chlSab2.chr16 I 142 C 0 s calJac3.chrUn_GL286409 829206 46 - 1291538 ---------AGACAGGCCCGTTGGAATTGCCTACTGCTGGCGGCGGGCGGGGCAG--------- i calJac3.chrUn_GL286409 I 5 C 0 s mm10.chr11 75769496 26 + 122082543 CAG-----GACGCGAG-----------------------GTGGATGATGGGCAT---------- i mm10.chr11 I 7 I 3 s canFam3.chr9 15585809 27 - 61074082 --------------GG-----------------------GCGGAGGGTGCCGCGCGCCGTCCGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 10854 480 + 80904711 M a score=-9759.000000 s hg38.chr17_GL383563v3_alt 84109 5 + 375691 -cgCTG------- s panTro4.chr17 75716 5 + 82630442 -ggcTG------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470781 5 - 17838096 -GGTTG------- i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37866 5 - 81552678 -ggTTG------- i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 23376 2 + 74645514 ----cg------- i papAnu2.chr16 I 65 C 0 s chlSab2.chr16 16016 2 + 75148670 ----TG------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 829252 5 - 1291538 -GGTTG------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75769525 2 + 122082543 -GA---------- i mm10.chr11 I 3 C 0 s canFam3.chr9 15585836 13 - 61074082 CGACTTCCTGTCA i canFam3.chr9 C 0 C 0 e rheMac3.chr16 10854 480 + 80904711 M e macFas5.chr16 10946 100 + 80997621 M a score=251685.000000 s hg38.chr17_GL383563v3_alt 84114 105 + 375691 GAGGCAGCGCCTGGTTACTGACA----CC------TGGAATGAC---------------TTTTTTTTTTT---------------GGCATCAGATTTCCTGTCTTT--GTGGGGATGATGGACCCGAGTAAAGATGCCCATTCGGGG s panTro4.chr17 75721 117 + 82630442 GAGGCAGCGCCTGGTTACTGACA----CC------TGGAATGAC---tttattttttttttttttttttt---------------GGCATCAGATTTCCTGTCTTT--GTGGGGATGATGGACCCGAGTAAAGATGCCCATTCGGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470786 113 - 17838096 GATGCAGCGCCTGGTTACTGACA----CC------TGGAATGAA-------TTCTGTTGTTTTTTTTTTT---------------TGCATCAGATTTCCTGTCTTT--GTGGGGCTGATGGACCCGAGTAAAGATGCCCATTCGGGG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37871 120 - 81552678 GATGCAGCGCCTGGTTACTGATA----CC------TGGAATGttttttttgttggttttttttttttttt---------------GGCATCAGATTTCCTGTCTTT--GTGGGGCTGATGGACCCAAGTAAAGATGCACATTTGGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 11048 110 + 80997621 GGGGCGTCGCCTGTTCGCTGACA----TC------TGGAATGAC----------TTTTTTTTTTTTTTTT---------------GGCATCAGATTTCCTGTCTTT--GTGGGGCTGATGGACCCCAGTAAAGATGCCCGTTCGGGG i macFas5.chr16 M 100 C 0 s papAnu2.chr16 23378 106 + 74645514 gacgcggcgCCTGGTTGCTGACA----Tc------tggaatgac-------------ttttttttttttt---------------ggcatcagATTTCCTGTC-TT--GTGGGGCTGATGGACCCGAGTAAAGATGCCCGTTCGGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 16018 102 + 75148670 GACGTGGCGCCTGGTTGCTGACA----TC------TGGAATGAC------------------TTTTTTTT---------------GGCATCAGATTTCCTGTCTTT--GTGGGGCTGATGGACCCGAGCAAAGATGCCCGTTCGGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 829257 108 - 1291538 AACGCGGCACCTCATTACTGACA----CCTGACTTTGGAATGAC-----------------TTTTGTTTT---------------GGCATCA-ATTTCCTGTCTTT--GTGGGGCTGATGTACCCGAGGAAAAATGCCCGTTTGGAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75769527 102 + 122082543 GAGGC----CCTGGTTACTGACAGTACTT------TGGAATGAC----------------CTTTGTTTTT---------------GGTATCAAATTTCC--TCTTT--GCAACGCTGATGAGCCAGAAGGAAGATACTCGTTTGGAA i mm10.chr11 C 0 C 0 s canFam3.chr9 15585849 103 - 61074082 GAGGC------------CAGACT----TC-------GGAGTTAC---------------------TTTTTGGAGGTGGGGGGAGGGGCGTCAGCTTTCCCGTCTTTTCGTGGGGCTGACAGACCGGAGGGAAGATGCCAGTTTGGGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 10854 480 + 80904711 M a score=128172.000000 s hg38.chr17_GL383563v3_alt 84219 102 + 375691 TCAAAGGCAGAGCCGCTTCTGCAGCTTCTCAAAGCG--ttgtttgt-------ttgttttttttctgagacggagtcttgctctgtcgcccaggctggagtgcagtgccgc s panTro4.chr17 75838 101 + 82630442 TCAAAGGCAGAGCCGCTTCTGCAGCTTCTCAAAGTG--ttttttgt-------tt-ttttttttctgagacggagtcttgctctgtcgcccaggctggagtgcagtggcgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470899 94 - 17838096 TCAAAGGCAGAGCC---------GCTTCTCAAAGCGttttgttttt-------tt-gtttttttctgagacagagtcttgctctgtcgcccaggctggagtgcagtggtgc i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 37991 100 - 81552678 TCAAAGGCAGAGCCGCTTCTGCAGCTTCTCAAAGCG--tttttttg-------tt--tttttttctgaaacggagtcttgctctgtcgcccaggctggagtgcagtggtgc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 11158 104 + 80997621 TCAAAGGCAGAGCCGCTTCTGCAGCTTCTCAAAGCG--ttttttttgtggg--tt-ttttttctttgagagggagtctcgctctgtcgcccaggctg--gtgcagtgatgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 23484 105 + 74645514 TCAAAGGCAGAGCCGCTTCTGCAGCTTCTCAAAGca---tttttttgtgggtttt-ttttttctttgagacggagtcttgctctgtcgcccaggctg--gtgcagtgatgt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 16120 106 + 75148670 TCAAAGGCAGAGCCGCTTCTGCAGCTTCTCAAAGCA--ttttttttgtgggtttt-ttttttctctctcttagagtcttgctctgtcgcccaggctg--gtgcagtgatgt i chlSab2.chr16 C 0 C 0 s mm10.chr11 75769629 34 + 122082543 TGAAAGACTGAACTGATTCTGAAACTTCTCAAAG----------------------------------------------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15585952 57 - 61074082 TCAAAGGCAGAGCTGATACTGCAGCTTC-CAGAACT-----------------TT-TTCTTTCGCTGAAATGCAAT----------------------------------- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 829365 0 - 1291538 C e rheMac3.chr16 10854 480 + 80904711 M a score=449963.000000 s hg38.chr17_GL383563v3_alt 84321 233 + 375691 gatcttggctcactgcagccttcacctcccgggttcaagcgattctcgtgcctcagcctccctgagtagctgggactacaggcgtgcgccaccacacccggctaatttttgtatttttagtagagatggggtttcgccctgttggccaggcgggtttcgaactcctgacctcaggtgatccgccagcctcggcctcccaaagtgctgcaattacaggcgtgagccatcgt-----gcc s panTro4.chr17 75939 233 + 82630442 gatcttggctcactgcagccttcacctcccgggttcaagcgattctcgtgcctcagcctccccgagtagctgggactacaggcgtgcgccaccacgcccggctaatttttgtatttttagtagagatggggtttcgccctgttggccaggtgggtttcgaattcctgacctcaggtgatccgccagcctcggcctcccaaaatgctgcaattacaggcgtgagccatcgt-----gcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3470993 238 - 17838096 gatcttcgctcacttcaaccttcacctcccgggttcaagcgattctcgtgcctcagccttcctgagtagctgggactacaggcgtgcgccaccatgcccggctaatttttgtatttttagtagagacgcggtttcgccatgttggccaggcgggtttcgaactaccgacctcaggtgatccgccagcctcggcctcccaaagtgctgggattacaggcgtgagccatcgtgcctggcc i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 38091 238 - 81552678 gatctcagctcactgcaaccttcacctcccgggttcaagcgattctcgtgcctcagcctccctgagtagctgggactacacacatgcgccaccacgcccggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggcgggtttcgaactcccgacctcaggtgatccgccagcctcggcctcccaaagtgctgggattactggcatgagccatcgcgcctggcc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 11348 237 + 80904711 gatcttgtctcactgaaacctccacctcccgggttcaagcgactctcctgcctcagcctccc-gagtagctgggactacaggcacgcgccaccacacccggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggcaggtttcaaactcccgacctcaggtgatcctcccgcctcgaactcccaaagtgctgggatgacaggcgggagccatcccgcccggcc i rheMac3.chr16 M 480 C 0 s macFas5.chr16 11262 237 + 80997621 gatcttgtctcactgcaagctccacctcccgggttcaagcgactctcctgcctcagcctccc-gagtagctgggactacaggcacgcgccaccacacccggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggcaggtttcaaactcccgacctcaggtgatcctcccgcctcgaactcccaaagtgctgggatgacaggcgggagccatcccgcccggcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 23589 237 + 74645514 gatcttgtctcactgaaacctccacctcccgggttcaagagactctcctgcctcagcctcct-gagtagctgggattacaggcatgcgccacctcgcctggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggcaggtttcgaactcccgacctcaggtgatcctcccgcctcgaactcccaaagtgctgggattacaggcgtgagccatcccgCCTGGCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 16226 238 + 75148670 gatcttgtctcactgaaacctccacctcccaggttcaagcaactctcctgcctcagcctccctgagtagctgggactacaggcgtgagccaccacacccggctaatttttgtatttttagtagagacggggtttcgccatgttggccaggcaggtttcgaactcccgacctcaggtgatcctcccgcctcgaactcccaaagtgctgggattacaggcatgagccatcccgcccggcc i chlSab2.chr16 C 0 C 0 s mm10.chr11 75769663 34 + 122082543 GACCTT---------------------------------------------------TTCCC-----------------------------------------------------TTTAGTAGAGATG---------------------------------------------------------------------TAATGTACTG------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15586009 90 - 61074082 ------------CTGCAA------------GGGGCCCGGCGGTCCTGGTG---------------------AAGACTACTCGCTCATTC-------CCCGG--------------------------GGGCCTCCTCCCTGCGCGCC--------------------------------CCATCCGCC----------------------------GCGTGGGCCGGC---------- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 829365 0 - 1291538 C a score=288773.000000 s hg38.chr17_GL383563v3_alt 84554 128 + 375691 TCAAAACGCTTTAACAGAAAGACAATCTGCACGGGATCTAAAAGGGTGCTGAGATCCTAGGGAAGGAAGG-ATCCAAACTTCCT---GGGGAGTTCCTGCCCGAGTGCCTGTGCTGCCCCTGGGCTGGCTGG s panTro4.chr17 76172 129 + 82630442 TCAAAACGCTTTAACAGAAAGACAATCTGCACGGGATCTAAAAGGGTGCTGAGATCCTAGGAAAGGAAGGTTTCCAAACTTCCT---GGGGAGTTCCTGCCCGAGTGCCCGTGCTGCCCCTGGGCTGGCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3471231 129 - 17838096 TCAAAATGGTTTAACAGAAAGACAATCTGCTTGGGATCTAGAAGGGTGCTGACATCCTGGGGAAGGAAGGTTTCCAAACTTCCT---GGGGAGTTCCTGCCCAAGTGCCCGTGCTGCCCCTGGGCTGGCTGG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 38329 128 - 81552678 TCAAAACGCTTTAACAGAAAGACAATCTGCACGGGATCTAGAAAGGTGCTGAGATCCTAGGGAAGGCAGGTTTCCAAACTTCCT----GTGAGTTCCTGCCCGAGTGCCCGTGCCGCCCCTGGGCTGGCTGG i nomLeu3.chr19 C 0 M 100 s rheMac3.chr16 11585 124 + 80904711 TCAAAGCGCTTTAACAGAAAGACAATCTGCACGGGATCTAGAAGGGTGCTGGGATCCTGGGGAAGGAA-GTTTCCGAACTTCCT---GGGGGGTTCCTGCCCGAGTGCCCGTGCTGCCCCCGGGATGG---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 11499 124 + 80997621 TCAAAGCGCTTTAACAGAAAGACAATCTGCACGGGATCTAGAAGGGTGCTGGGATCCTGGGGAAGGAA-GTTTCCGAACTTCCT---GGGGGGTTCCCGCCCGAGTGCCCGTGCTGCCCCCGGGATGG---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 23826 125 + 74645514 TCAAAGCGCTTTAACAGAAAGACAATCTGCACGGGATCTAGAAGGGTGCTGGGATCCTGGGGAAGGAAGGTTTCCGAATTTCCT---GGGGGGTTCCCGCCCGAGTGCCCGTGCTGCCCCCGGGATGG---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 16464 125 + 75148670 TCAAAGCGCTTTAACAGAAAGACAATCTGCACGGGATCTAGAAAGGTGCTGGGATCCTGGGGAAGGTTGGTTTCCGAATTTCCT---GGGGGGTTCCTGCCCGAGTGCTCGTGCTGCCCCCGTGATGG---- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 829365 129 - 1291538 TCAACGCACTTTG--AGAGAGAGAATCTGCATGGGATCTAGAACCAAGC-AGGATCCTAGGTAAGGACGATTTCCAAACTTCCTGGCGGGGGGTTCCTGCCGGAGTGGCCGCGCTGCCCCTGGGCTGGGTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75769697 69 + 122082543 --------------------------------GGGATTTAGAAACGTTCCAGGATCC------GGGAAAGTTCCATCACTTTTT-------------------AGTGGCCAT--CACTTTTTAGGTGG---- i mm10.chr11 C 0 C 0 s canFam3.chr9 15586099 36 - 61074082 ------------------------------------------------------------------------------CGTCCC---GAAGA--------CCTAGCTTCCATCCTGTCCCTGTGG------- i canFam3.chr9 C 0 C 0 a score=47414.000000 s hg38.chr17_GL383563v3_alt 84682 27 + 375691 CCAGTAAG-CCCGCCTCCCAGCCTGAC-T s panTro4.chr17 76301 27 + 82630442 CCAGTAAG-CCTGCCTCCCAGCCTGAC-T i panTro4.chr17 C 0 M 2534 s ponAbe2.chr17_random 3471360 27 - 17838096 CCAGTAAG-CCCGCCTCCCAACCTGAC-T i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 11709 26 + 80904711 CCAGTGAG-CCCGCCTCCCAGCCTGAC-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 11623 26 + 80997621 CCAGTGAG-CCCGCCTCCCAGCCTGAC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 23951 26 + 74645514 CCAGTGAG-CCCGCCTCCCAGCCTGAC-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 16589 27 + 75148670 CCAGTGAG-CCCGCCTCCCAGCCTGACT- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 829494 28 - 1291538 CCAATGAGCCCCACCTCCCAGCCTGAC-T i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75769766 27 + 122082543 CTAGAAGC-CCTGCTTCCCACCCTGCC-T i mm10.chr11 C 0 C 0 s canFam3.chr9 15586135 6 - 61074082 -----------------TCAGCT------ i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 38457 100 - 81552678 M a score=287402.000000 s hg38.chr17_GL383563v3_alt 84709 211 + 375691 GTCCC----------------CATCTTTCGGTCCCA--GCCCCATTTGCACAGCctgggcagtagagggccctggactggggggctggagttctgggttcttgtcccagctgtgccccttcaggcccctttcacccactgggcctcacattccccatgtgcctaataagga-----agtcat-ggtaggtgg--------------ggggtaca-gcctcttctcgctttgccat---tcA---CTTCTGTGTCTT s ponAbe2.chr17_random 3471387 211 - 17838096 GTCCC----------------CATCTTTCGGGCCCA--GCCACATTTGCACAGCctgggcagtagagggccctggactggggggctggagttctgggttcttgtcccagctctgcccctTCAGGCCCCTTTCGCCCACAACGCCCCACATTCCCCACGTGCCTAATAAGGA-----AGTCAT-GCTAGGTGG--------------AGGGTACA-GCCTCTTCTAGCTTTGCCAT---TCA---CTTCTGTGTCTT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 11735 208 + 80904711 -TCCC----------------CGTCTGTCAGGCCCA--GCCCCATTTGTGCAGCctgggcggtagagggccctggactggggggctggagctctgggttcttgccccagctgtgccccagcaggccccgtccgcccacag-gccccaagttccccatgtgcct-ataagga-----agtcat-gctgggtgg--------------agggtgca-gcctcttctagctttgacat---tcA---CTTCTGTGTCTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 11649 208 + 80997621 -TCCC----------------CGTCTGTCAGGCCCA--GCCCCATTTGTGCAGCctgggcggtagaggaccctggactggggggctggagctctgggttcttgccccagctgtgccccagcaggccccgtccgcccacag-gccccaagttccccatgtgcct-ataagga-----agtcat-gctgggtgg--------------agggtgca-gcctcttctagctttgccat---tcA---CTTCTGTGTCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 23977 208 + 74645514 -TCCC----------------CGTCTGTCAGGCCCA--GCCCCATTTGtgcagcctgggcagtagagggCCCTGGACTGGGGGGCTGGAGCTCTGGGTTCTTGCCCCAGCTGTGCCCCTGCAGGCCCCGTCCGCCCACAG-GCCCCAAGTTCCCCATGTGCCT-ATAAGGA-----AGTCAT-GCTAGCTGG--------------AGGGTGCA-GCCTCTTCTAGCTTTGCCAT---TCA---CTTCTGTGTCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 16616 191 + 75148670 GTCCC----------------CATCTTTCAGGCCCA--GCCCCATTTGTGCAGCctgggcagtagagggccctggacttgggggctggagttctgggttcttgtcccagctgtgcccctG-----------------CAG-GCCCCAAGTTCCCCATGTGCCT-ATAAGGA-----AGTCAT--CTAGGTGG--------------AGGGTGCA-GCCTCTTCTAGCTTTGCCAT---TCA---CTTCTGTGTCTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 829522 210 - 1291538 GTCCC----------------CACCTTTCGGGTCCA--GCCCCATTTGCACAGCCTGGTCAGgacaggg-cctgcactaggggcctggagttccgggttcttgtcccagctgtacccctaCAGGGCCCTTCCGCCCAC---GCGCTGAA---------------TTAAGGA-----AGCCATAACCAGGTGGCTCTTAACACAGCCATAACACA-GCCTCTTCTACCTTTGCCGTTCATCA---CTTCCGTGTCTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75769793 164 + 122082543 GTCCCTGGGATTGGCAAGGATCATCATTGAGTCCCA--AACCCACTT--ACTGCCTGGT---------------------GCAACAGGGATCCAGGTTTCTTGT-CCACCTGAGCC-------------------------ACC------------TGTTCTT-TTGATGAGCTTCAGTCAC-CTCAGGTAT--------------AATAAACA-------TTTAGGTATAATAA---ACA---TTTCTGTATCGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15586141 173 - 61074082 ----------------GGGACCATCTTTCAGGGCCCGTGTACTCTTTGCACAGCCTTGGT--CAGTTAGCCCTAAA-----------------TGGTTCCTTACCC------------------------TCGCCGGctg-ggcctcagtttccctggtgtctagtaagga-----atttgt-attcggttg--------------agagtcaaggccccttccagccttgccct---tcGGCCTTTCAGTATCCT i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 38457 100 - 81552678 M e panTro4.chr17 76328 2534 + 82630442 M a score=1456897.000000 s hg38.chr17_GL383563v3_alt 84920 597 + 375691 --CAGAGAGGCTGTCAAATCTCCTCTCTGAATGAGA----CCCCCA----------------------------------------------------------------------------------AAAAAGCAAAG-CTAAGAAGATACCCAGAGCTTAACTAGACACCAGGC-CTTTTAGAAATAGACCACCTCTTACCTTAGGCCCCCAGAGGGTGCCC-ATT----CTGTGTGGAGAAAAGAGGAGCCC--TTGCCT-CAGCCCCCAG-----AGGCTA-GGGTGGGGTGGCTGAGTTTTGGGGCCAGGTTAGACACCTCTGGGGAAGCCTGAAGTAGCACGGATGGTTTCAAAGCCAGC----GGATGAGGTGGCAGGACAGTGACAAGACCCCAGGTCTCCATCATGCACCTGAGCTTACTGAGCCTTCACCTGGTGTCTCTGCTGAGTCTCCGACAGACCAAGAGGGAAGGGACTGGGGGTACCGACCCCcagagagagaaagcggcagtcagaggacctgggtttgagtcctggttcaccccttcctggctgtgtggccttggcaaactactca-gactctgggaacctg-t---ttcacctgcaagatggggatgagaatcaaacccaccttgcagggctgtgaacatgcgttcagaccagtgcatgcaaaaaccttcacaca-A-AAACCCTTCCTAAAG s ponAbe2.chr17_random 3471598 590 - 17838096 --CAGAGAGGCTGTCAAGTCTCTTCTCTGAATGAG-----CCCCCA----------------------------------------------------------------------------------AAAAAGCAAAG-CTAAGAAGATACCCAGAGCTTACCTAGACACCAGGC-CTTTTAGAAATAGACCACCTCTTACCTTAGGCCCCCAAAGGGTGCCC-ATT----CTGTGTGGAGAAAAGAGGAGCCC--TTGCCT-CAGCCCCCAG-----AGGCTA-GGGTGGGGTGGCTGAATTTTGGGGCCGGGTTAGGCACCTCTGGGGAAGCCTGAAGTAGCACGGATGGTTTCAAAGCCAGC----GGACGAGGTGGCAGGACAGTGACAAGACCCCAGGTCTCCATCATGCACCTGAGCTTACTGAGCCTTCACCTGGGGTCACTGCTGAGTCTCCGACAGACCAGGAGGGAAGAGACTGGGGGTACCGACCCCCAGGGAGAGAAAGTGGCagtcagaggacctgggtttgagtcctggctcaccccttcctggctgtg------tcacaaactactca-gactctgggaacctg-t---ttcacctgcaagatggggatgagaatcaaacccaccgtgcagggctgtgaacatgcgttcagacaagtgcatgaaaaaactttcacaca-A-AAACCCTTCCTGAAG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 38557 595 - 81552678 --CAGAGAGGCTGTCAAGTCTCCTCTCTGAATCAG-----ACCTCC----------------------------------------------------------------------------------AAAAAGCAAAG-CTAAGAAGATACCCAGAGCTCGCCTAGACACCAGGC-CTTTTAGAAATAGACCACCTCTTACCTTAGGCCCCCAGAGGGTGCCC-ATT----CTGTGTGGAGAAAAGAGGAGCCC--TTGCCT-CAGCCCCCAG-----AGGCTA-GGGTGGGGTGGCTGGATTTTGGGGCCGGGTTAGGCACCTCTGGGGAAGCCTGAAGCAGCACGGATGGTTTCAAAGCCAGC----AGACGAGGTGGCAGGACAATGGCAAGACCCCAGGTCTCCATCATGTACCTGAGCTTCCTGAGCCTTCACCTGGGGTCTCCGCTGAGTCTCCGACAGACCAGGAGGGAAGGGACTGCGGGTACCGACCCCcagggagagaaagtggcagtcagaggacctgggtttgagtcctggctca-cccttcctggctatgcggccttggcaaactactca-gactctgggaacctg-t---ttcaccggcaagatgaggatgagaatcaaacccaccttgcagggctgtgaacatgcgttcaggcaagtgcatgcaaaaaccttctcaca-A-AAACCCTCCCTAAAG i nomLeu3.chr19 M 100 C 0 s rheMac3.chr16 11943 598 + 80904711 --CAGAGAGGCTGTCAAGTCTCCTCTCTGAATGAGA----CCCACAA---------------------------------------------------------------------------------AAAAAGCAAAG-CTAAGACGATGCCCAGAACTTACGTAGACACCAGGC-CTTTTAGAAATAGACCACCTCTTACCTTAGGCCCCCCGAGGATGCCC-ATT----CTGTGTGGAGAAAAGAGGGGCCC--TTGCCT-CAGCCCCCAG-----AGGCTA-GGGTGGGGTGGCTGAATTTTGGGGCCTGGTTAGGCACCTCTGGGGAAGCCTGAAGTAGCACAGATGGTTTCAAAGCCAGC----GGACGAGGAGGCAGGACAGTGGCAAGACCCCAGGTCTCCATCATGCACC-GAGCTTACTGAGCCTACACCTGGGGTCTCCGCTGAGTCTCTGACAGACCAGGAGGGAAGGGACTGGGGGTACCGACCCCCAGAGAGAGAAAGTGGCagtcataagacctgggtttgagtcctggctcaccccttcctggctctgtggccttggcaaactactca-gactctgggaacatg-t---ttcacctgcaagatggggatgagaatcaaatccaccttgcagggctgtgaagatgcgtccagacaagtgcatgcaaacgcttTCACACACA-AAACCCTTCCTAAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 11857 598 + 80997621 --CAGAGAGGCTGTCAAGTCTCCTCTCTGAATGAGA----CCCACAA---------------------------------------------------------------------------------AAAAAGCAAAG-CTAAGACGATGCCCAGAACTTACGTAGACACCAGGC-CTTTTAGAAATAGACCACCTCTTACCTTAGGCCCCCCGAGGATGCCC-ATT----CTGTGTGGAGAAAAGAGGGGCCC--TTGCCT-CAGCCCCCAG-----AGGCTA-GGGTGGGGTGGCTGAATTTTGGGGCCTGCTTAGGCACCTCTGGGGAAGCCTGAAGTAGCACAGATGGTTTCAAAGCCAGC----GGACGAGGAGGCAGGACAGTGGCAAGACCCCAGGTCTCCATCATGCACC-GAGCTTACTGAGCCTACACCTGGGGTCTCCGCTGAGTCTCTGACAGACCAGGAGGGAAGGGACTGGGGGTACCGACCCCcagagagagaaagtggcagtcataagacctgggtttgagtcctggctcaccccttcctggctctgtggccttggcaaactactca-gactctgggaacatg-t---ttcacctgcaagatggggatgagaatcaaatccaccttgcagggctgtgaagacgcgtccagacaagtgcatgcaaacgccttcacacaCA-AAACCCTTCCTAAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 24185 598 + 74645514 --CAGAGAGGCGGTCAAGTCTCCTCTCTGAATGAGA----CCCACaa---------------------------------------------------------------------------------aaaaaGCAAAG-CTAAGACGATGCCCAGAACTTACGTAGACACCAGGT-CTTTTAGAAATAGACCACCTCTTACCTTAGGCCCCCCGAGGATGCCC-ATT----CTGTGTGGAGAAAAGAGGGGccc--ttgcct-cagcccccag-----aggcTA-GGGTGGGGTGGCCGAATTTTGGGGCCGGGTTAGGCACCTCTGGGGAAGCCTGAAGTAGCACAGATGGTTTCAAAGCCAGC----GGACGAGGGGGCAGGACAGTGGCAAGACCCCAGGTCTCCATCATGCACC-GAGCTTACTGAGCCTACACCTGGGGTCTCTGCTGAGTCTCTGACAGACCAGGAGGGAAGGGACTGGGGGTACCGACccccagagagagaaagtggcAGTCATAAGACCTGGCTTTGAGTCGTGGCTCACCCCTTCCTGGCTCTGTGGCCTTGGCAAACTACTCA-GACTCCGGGAACATG-T---TTCACCTGCAAGATGGGGTTGAGAATCAAACCCACCTCGCAGGGCTGTGAAGACGCGTCCAGACAAGTGCATGCAAACGCCTTCACACACA-AAACCCTTCCTAAAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 16807 588 + 75148670 --CAGAGAGGCGGTCAAGTCTCCGCTCTGAATGAGA----CCCACAC---------------------------------------------------------------------------------AAAAAGCAAAG-CTAAGACGATGCCCAGAACTTACATAGACACCAGGC-CTTTCAGAAATAGACCACCTCTTACCTTAGACCCCCAGAGGATGCCC-ATT----CTGTGTGGAGAAAAGAGGGGCCT--TTGCCT-CAGCCCCCAG-----AGGCTA----------GGCTGAATTTTGGGGCCGGGTTAGGCACCTCT-GGGAAGCCTGAAGTAGCACAGACGGTTTCAAAGCCAGT----GGACGAGGAGGCAGGACAGTGGCAAGACCCCAGGTCTCCCTCATGCACC-GAGCTTGCTGAGCCTACACCTGGGGTCTCCGCTGAGTCTCTGACAGACCAGGAGGGAAGGGACTGGGGGTACCGACCCCcagagagagaaagtggcagtcataagacctggctttgagtcctggctcaccccttcctggctctgtggccttgacaaactactcg-gactcggggaacatg-t---ttcacctgcaagatggggatgagaatcaaacccacctcacagggctgtgaagacgcgtccagacaagtgcatgcaaaagccttcacacaCA-AAACCCTTCCTAAAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 829732 668 - 1291538 --CAAACAGGCTGTCAAGTCTCCTCTCTGAATGAGACCTCCCCCCAAAAGGCAAAGAAGATAGCCAGAGCTTTGCATGAGAcccacccccccaccaccccccacctcccccaccccccacccccGCTCAAAAAGCAAAG-CTAAGAAGATACCCAGAGCTTAGCTAGACACCAGGC-CTTTTAGATATGGACCGCCTCTTACCTTAGGTCCCCAAAGGGTCTCC-ATTCTGGCTGCATGGAGAAAAGAGGAGCCT--TTGCCT-CAACCTGCAG-----AGGCTG-GGGTAGGGTGGCTGAATTCTGGGACTGGGTTAGGCACCTCTGGGGGAGCCTGAAGTAGCATGGATGGTTTCAAAGCCAGC----AGACAAGGTGGCAGGACAGTGACAAGACCCCAGGTCCCTATCGTGCACCAGAGCTCACTGAGTCTCCACCTGGGGTCTCTGCTGAGTCTCTGACAGACCAGGAGGGAAGGAACTGGGGGTACTGATCCCcagagagagaaagtggcagtcagaggacttgggtttgagtcctggctcaccccttcctggttgtttggccttgacaaactgctca-gactctgggaacctgtt---ttcacctacaagatggggc--agagtcaaacccagcttgcagggctgtgaagatGAGTTCTGCCA------------------CATACC-A-AAAGCCTTCCTAAAG i calJac3.chrUn_GL286409 C 0 M 948 s mm10.chr11 75769957 517 + 122082543 ----CGGGGGGTTTCTAAACTCCTCTCTGAACAAAG----CACCCC----------------------------------------------------------------------------------AAAAGGCAAAATCTGA---GTTACTCAGAGCTCA-------ACCAGGTGCACTTAAATAT---CTGCTCCTGTTTCTAG-------------------------CTGTATGGGGAAAACATCAGGCCGGTCCCCC-AAGTTCCTTGACCTCAGGCTGGGGGTGGGACAGCTGAGTTCCAGGGCTTGGCT--GTAGCCTTTGGCAAATCCTAAATGGCACAAATGATTTCAAAGCCAGCTAGAGGGTGAGGTGGC-TGACAATAACAAGACT-----TCTCTGTAAGAGACC-----TCACTAAGCC--------------CCATTAACTCC-----------GGAGAGAGGGACCTGAGAGTCCTTGTCCTCAGA------------Tagtcaaaaggcttggagt----ttttgcttcagcccttcacaccgtggtggccctggaagtttatcaacaactctggagcca---t---ctcatttataaaatg-ggttgaccatgcctcccaccacacaggatggtgaagattcaataaga-AGGCGTTTGCCAATTCAGTAACAGGCG-ACACCTTT--TAAA- i mm10.chr11 C 0 C 0 s canFam3.chr9 15586314 580 - 61074082 CAAGGAGAAGCGGT-GAGACTCCTCTCCAAACAAGG----CCCTTC----------------------------------------------------------------------------------AAGAAGCAAAG-CT-AGAAGATACTTAGGGCTCACCCAGCCGGGAGGT-CCCTCAAAAACAGGCCATCCCTTTCCTTAGGCCCCCAGCGGTTCCCCTATTCCAGCCTTGTGGAGAAGAGAG-AGCCC--TGGCCTACAGACTCC-------GAGCTA-GGGAGGGATTGCTGAGCTCCCAGCGGACCCTGGGGACCTCTGGGGGTAGCTCTAACCGGACCAGTGATTTCAAAGCCATCTAGGGGATGAGGCAGCAGGACA-CAATGGGGTCTCACCCCTTCCTCATGCACT-GCGTCTTCTGAGTCTA-----------TCTGCTGAGCAGTCCTCAGCTCAGGAGGGAGAGCACTCGGGA----GTTCTCcaga----ggatgtggcagtcacgggacctggcct-gagacctagtttgccctttcccagctctgtgacactgacaaattactca-gcctctctgaatcag-tttcttcatctgtcaaatgaggatga----cacacccacct--cagaattgtgaaaattcattaaga-gagtgcgtgtaaaactcttaacataCACAAAGCCGCCTTGAAG i canFam3.chr9 C 0 C 0 e panTro4.chr17 76328 2534 + 82630442 M a score=356588.000000 s hg38.chr17_GL383563v3_alt 85517 163 + 375691 -GCAGGGAGACAAGTCTC-CAGGAGCAGCAG-GTGGCCAGGGACTGTGTGGGGGCTGGGGTCCTGTTTTCCCCGCAACCTGGGAAAGGCCTGATGGGCACTTGGTAGGATTCAAATCATAACCCTGGACCTCAGGTGGTGGTGTGCTTTGTGTCTGCAGTGGAAGG s ponAbe2.chr17_random 3472188 163 - 17838096 -GTGGGGAGACAAGGCTC-CACGAGCAGCAA-GTGGCCAGGGACTGTGTGGGGGCTGGGATCCTGTTTTCCCTGCAACCTGGGAAAGGCCTGATGGGCACTTGGTAGGATTCAAATCATGACCCTGGATCTCAGGTGGTGATGTGCTTTGCGTCTGCAGTGGAAGG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 39152 144 - 81552678 -GTGGGGAGACAAGGCTC-CATGAGCAGCAG-GTGGCCAGGGACTGTGTGGGGGCTGGGGTCCTGTTTTCCCTGCAACCTGGGAAAGGCCTGATGGGCACTTGGTGGGATTCAAATCATGACCCTGGACCTCAGGTGGTGGTGTGCT------------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 12541 162 + 80904711 -GTGGGCAGACAAGGCTC-CATGAGCAGCAG-GTGGCCAGGGACCGTGT-GGGGCTGGGGTCCTGTTTTCCCTGCAATCTGGGAAAGGCATGATGGGCACTTGGTGGGATTCAAATCATGACCCTGCACCTCAGGTGGTGGTGTGCTTTGTGTCTGCAGTGGAAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 12455 162 + 80997621 -GTGGGCAGACAAGGCTC-CATGAGCAGCAG-GTGGCCAGGGACCGTGT-GGGGCTGGGGTCCTGTTTTCCCTGCAACCTGGGAAAGGCATGATGGGCACTTGGTGGGATTCAAATCATGACCCTGCACCTCAGGTGGTGGTGTGCTTTGTGTCTGCAGTGGAAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 24783 162 + 74645514 -GTGGGCAGACAAGGCTC-CATGAGCAGCAG-GTGGCCAGGGACTGTGT-AGGGCTGGGGTCCTGTTTTCCCTGCAACCTGGGAAAGGCATGATGGGCACTTGGTGGGATTCAAATCATGACCCTGCACCTCAGGTGGTGGTGTGCTTTGTGTCTGCAGTGGAAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 17395 154 + 75148670 -GGGG--AGACAAGGCTC-CACG------AG-GTGGCCAGGGACCGTGT-GGGGCTGGGGTCCTGTTTTCCCTGCAACCTGGGAAAGGCATGATGGGCACTTGGTGGGATTCAAATCATGACCCTGCACCTCAGGTTGTGGTGTGCTTGGTGTCTGCAGTGGAAGT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75770474 150 + 122082543 -GAGGGAAACCCAGTCTCTTACAAGCAACAG-GTGGCTTGGTGCTGTGG-AGAGCTAGAGACCTATTTTCCCTGCCAACTAGGGAAGGC-TGGTGAGCACT--GT-GGATTGGAATCATGTTCTGGGACCCCGAGT---------TCTTATTTCAGCTGTAGGAGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15586894 161 - 61074082 ACAGGAAACCCAAGGCTC-TGTGACCAGCAATGTTGCCAGGTGCCATGTGGGGGCTGGAGTCCTGTCGTCCCTGCAAACTGGGAAAGGGCTGATGGGCACTTGGTGGAATTCGAATCATCACCCCAGACCTCAGATGGTGATGTGCTTTGTGTCTGCAGCAG---- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 830400 948 - 1291538 M e panTro4.chr17 76328 2534 + 82630442 M a score=243497.000000 s hg38.chr17_GL383563v3_alt 85680 138 + 375691 TCCCACCGTCGTGCCTGTGAGTCCCTCTATCGGTGTTGAAGGGGTGG--GCAGCAGGCGGGGGAGCCCCAGGCTGGCAGCTAGCAGGACCTCTCTGGTGTGAGCTCAGCACGCCAATTCCCCTGAAGCGTGGTGTCCagc s ponAbe2.chr17_random 3472351 138 - 17838096 TCCCGCCGTCGTGCCTGTGAGTCCCTCTATCGGTGTTGAAGGGGTGG--GCAGCAGGCAGGTGAGCCCCAGGCTGGCAGCTAGCAGGACCTCTCTCATGTGAGCGCAGCATGCCAATTCCCCTGAAGTGTGGTGTCCAGC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 39296 133 - 81552678 -----CTGTCGTGCCTGTGAGTCCCTCTATCGGTGTTGAAGGGGTGG--GCAGCAGGCGGGTGAGCCCCAGGCTGGCAGCTAGCAGGACCTCTCTTGTGTGAGCTCAGCACGCCAATTCCCCTCAAGTGTGGCGTCCagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 12703 138 + 80904711 TCCCACCATCGTGCCTGTCAGTCCCTCTAACGGTGTTGAAGGGGTGG--GCAGCAGGCGGGTGAGCCCCAGGCTAGCAGCTAGCAGGACCTCTCTCATGTGAGCTCAGCACAGCAATTCCCCTGAAGTGTCGGGTCCAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 12617 138 + 80997621 TCCCACCATCGTGCCTGTCAGTCCCTCTAACGGTGTTGAAGGGGTGG--GCAGCAGGCGGGTGAGCCCCAGGCTAGCAGCTAGCAGGACCTCTCTCATGTGAGCTCAGCACAGCAATTCCCCTGAAGTGTCGGGTCCagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 24945 140 + 74645514 TCCCACCATCGTGCCTGTCAGTCCCCCTAACGGTGTTGAAggggggggTGCAGCAGGCGGGTGAGCCCCAGGCTGGCAGCTAGCAGGACCTCTCTCATGTGAGCTCAGCACAGCAATTCCCCTGAAGTGTCGGGTCCAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 17549 137 + 75148670 TCCCACCATCGTGCCTGTCAGTCCCTCTACCGGTGTTGAAGGGGTGG--GCAGCAGGCGGGTGAGCCCCAGGCTGGCAGCTAGCAGGACCTCTCTCATGTGAGCTCAGCACAGCAATTCCCCTG-AGTGTGGGGTCCagc i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15587055 71 - 61074082 ------------------------------------------------------GGAGAGGTGAGCCCCAGGCAGGCAGCTGACA---------------GAGCCCGGCTCCCTCCTTCCCCTGAACTGTGTTGTCCAGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75770624 0 + 122082543 C e calJac3.chrUn_GL286409 830400 948 - 1291538 M e panTro4.chr17 76328 2534 + 82630442 M a score=301628.000000 s hg38.chr17_GL383563v3_alt 85818 161 + 375691 actctgggctgggggctgtggatcctggtt----ccagctgtgtggggcctggaagg----ccctgggcaggtca--cctgacctctctgggc--ctgtttc-cATCA-CACACTGATGGGCTGAGCACACTGGGACTC-----TGGCTGTGCAACTCCTTGGCTCTGCATTTGTTCACC s ponAbe2.chr17_random 3472489 163 - 17838096 ACTCTGGGCTGGGGGCTGtggatcctggtt----ccagctgtgtgggggctggaagg----ccctgggcaggtca--cctgacctctctgggcctctgtttc-cATCA-CACACTAATGGGCTGAGCACACTGGGACTC-----TGGCTGCGCAACTCCTTGGCTCCGCATTTGTTCACC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 39429 163 - 81552678 actctgggctgggggttgtggatcctggtt----ccagctgtgtgggggctggaaga----ccctgggcaggtca--cctgacctctctgggcctctgtttc-cATCA-CACACTGATGGGCTGAGCACACTGGGACTC-----TGGCTGTGCAACTCCTTGGCTCTGCATTTGTTCACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 12841 161 + 80904711 ACTCTGGGCTGGGGGCTGtggatcctggtt----ccagccctgtgggggctggaagg----ccctgagcgggtca--cctaacctctctgggcctctgtttc-cATCA-CACGCTGATGGGCTGAGCAAA--AGGAGTC-----TGGCTGTGCAACACCTTGGCTCTGCATTTGTTCACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 12755 161 + 80997621 actctgggctcggggctgtggatcctggtt----ccagccctgtgggggctggaagg----ccctgagcaggtca--cctaacctctctgggcctctgtttc-cATCA-CACGCTGATGGGCTGAGCAAA--AGGAGTC-----TGGCTGTGCAACACCTTGGCTCTGCATTTGTTCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 25085 161 + 74645514 ACTCTGGGCTGGGGGCTTTGGATCCTGGTT----CCAGCCCTGTGGGGGCTGGAAGG----CCCTGAGCAGgtca--cctaacctctctgggcctctgtttc-catCA-CACACTGATGGGCTGACCAAA--AGGAGTC-----TGGCTGTGCAACACCTTGGCTCTGCATTTGTTCACG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 17686 161 + 75148670 actccgggctgggggctgtggatcctggtt----ccagctctgtgggggctggaagg----ccctgagcaggtca--cgtaacctctctgggcctctgtttc-catca-cacactgatgggctgagcaaa--aggactc-----tGGCTGTGCAACGCCTTGGCTCTGCATTTGTTCACC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75770624 103 + 122082543 GTTCTAGGCTTAGGG------------------------------------------------------------------------CAGGACCCCAGTGTCTTATCA-CTCAGTGATGGATTGAGGAAAATGGGGCTCTGAGATGATGGTGGAACTCCTTGGTTCC----CTGTTCCCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15587126 154 - 61074082 GCTCTGGGCTAGAGGT----GAGCCTGGCTTACCCCTGCTGTGGTGGGGCGGGAAGGTCTCCCTCCGGCAGGTTACTCTTCCCCTCTCTGGGCCTCTGTTTTGCATTAGTGCAGTGCTGGGGCAAACAGA----CATTC------------------CCCTCGCTCCGCATTTGTTCACA i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 830400 948 - 1291538 M e panTro4.chr17 76328 2534 + 82630442 M a score=801090.000000 s hg38.chr17_GL383563v3_alt 85979 335 + 375691 CAGCGTTCCTGAGGGG-CCCTTGGTAGGCAGAGAAAGTTTGTGGGCTTCAGGCATGGGCCCCAAGATTCAGATACTCTCAAGCC--TCCTGGGGAGTCTCACTCAGGGGAGCAGACAGGCCCACCAGCCAGGGTGATTCTTGCTCAGCTCCTG-GAGGGTGGAGCTGGCCCCACAGGCCTCCCCAGAGACAAGGCCCTGGA-CGGCCACTGATTACTCCCAAAAGGGACATCTGTGGCGGTAGTGGGACCAAGATGCCACGAGCAAGCACCCGGAGGCCCC-------CAGTG----TGAGCC-AT--GGAGTGG----------AGGGGAGGGGAAAGGGCAG--AGTCAGGACGTGTAGGAATG s ponAbe2.chr17_random 3472652 336 - 17838096 CAGCGTTCCTGAGGGGCCCCTTGGTAGGCAGGGAAAGTCTGCGGGCTTCAGGCATGGGCCCCAAGATTCAGATACTCTCAAGCC--TCCTGGGGAGTCTCACTCAGGGGAGCAGACAGGCCCACAAGGCAGGGTGATTCTTGCTCAGCTCCTG-GGGGTTGGAGCCGGCCCCACAGGCCTCCCCAGAGACAAGGCCCTGGA-CTGCCACTGATTACTCCCAAAAGGGACATCTGTGGCGGTAGTGGGACCAAGATGCCATGAGCAAGCACCCAGAGGCCCC-------CAGTG----TGAGCC-AC--GGAGTGG----------AGGGTTAGGGAAAGGGCAG--AGTCAGGATGTGCAGGAATG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 39592 338 - 81552678 CAGCGTTCCTGAGGGG-CCCTTGGTAGGCAGGGAAAGTTTGTGGGCTTCAGGCATGGGCCCCAAGATTCAGATACTCTCAAGCC--TCCTGGGGAGTCTCACTCAGGGGAGCAGACAGGACCACCAGGCAGGGTGATTCTTGCTCAGCTCCTG-GAGGGTGGAGTCGGCCCCACAGGCCTCCCCAGAGACAAGGCCCTGGA-CTGCCACCGATTACTCCAAAAAGGGACATCTGTGGCAGTAGTGGGACCAAGATGCCATGAGCAAGCACCCGGAGGCCCC-------CAGTG----TGGCTT-aaggggagtgg---------aagggaaagggaaagggcag--agcgaggacgagcgggaatg i nomLeu3.chr19 C 0 I 151 s rheMac3.chr16 13002 337 + 80904711 CAGTGTTCCTGGGGGC-CCCTTGGTAGGCAGGGAAAGTTTGTGGGCTTCAGGCATGGGCCCCAAGACTCAGATACTCTCAAGCC--TCCTGCAGAGCCGAACTCAGGGAAGCAGACAGGCCCACCAGGCAGGGCGATTCCTGCTCAGCTCCTG-GAGGGTGGAGCCAGCCCCACAGGCCTCCCCAGAGACAAGGCCCTGGA-CTGCCACTGATTACTCCCAGAAGGGACATCTGTGGTGGTGGTAGGACCAAGATGCCATGAGCAAGCACCTGGAGGCCCCCAGTACTCAGTG----TGAGCC-AG--GAAGTGG----------AGGGGAAGGGAAAGGGCAG--AGGGAGGACGTATAG----- i rheMac3.chr16 C 0 I 2 s macFas5.chr16 12916 337 + 80997621 CAGTGTTCCTGGGGGC-CCCTTGGTAGGCAGGGAAAGTTTGTGGGCTTCAGGCATGGGCCCCAAGACTCAGATACTCTCAAGCC--TCCTGCAGAGCCGAACTCAGGGAAGCAGACAGGCCCACCAGGCAGGGCGATTCCTGCTCAGCTCCTG-GAGGGTGGAGCCAGCCCCACAGGCCTCCCCAGAGACAAGGCCCTGGA-CTGCCACTGATTACTCCCAGAAGGGACATCTGTGGTGGTGGTAGGACCAAGATGCCATGAGCAAGCACCTGGAGGCCCCCAGTACTCAGTG----TGAGCC-Ag--gaagtgg----------aggggaagggaaagggcag--agggAGGACGTATAG----- i macFas5.chr16 C 0 I 2 s papAnu2.chr16 25246 340 + 74645514 CAGTGTTCCTGGGGGC-CCCTTGGTAGGCAGGGAAAGTTTGTGGGCTTCAGGCATGGGCCCCAAGACTCAGATACTCTCAAGCC--TCCTGGAGAGCTGAACACAGGGAAGCAGACAGGCCCACCAGGCAGGGCGATTCCTGCTCAGCTCCTG-GAGGGTGGAGCCAGCCCCACAGGCCTCCCCAGAGACAAGGCCCTGGA-CTGCCACTGATTACTCCCAGAAGGGACATCTGTGGTGGTGGTAGGACCAAGATGCCATGAGCAAGCACCTGGAGGCCCCCAGTACTCAGTG----TGAGCC-AG--GAagtgg----------aggggaagggaaagggcag--ACTGAGGACGTACAGGAA-- i papAnu2.chr16 C 0 I 2 s chlSab2.chr16 17847 342 + 75148670 CAGTGTTCCTGGGGGC-CCCTTGGTAGGCAGGGAAAGTTTGTGGGCTTCAGGCATGGGCCCCAAGACTCAGATACTCTCAAGCC--TCCTGGAGAGCCTAACTCAGGGAAGCAGACAGGCCCACCAGGCAGGGCGGTTCCTGCTCAGCTCCTG-GAGGGTGGAGCCAGCCCCACAGGCCTCCCCAGAGACAAGGCCCTGGA-CTGCCACTGATTAGTCCCAGAAGGGACATCTGTGGTGGTGGTAGGACCAAGACGCCATGAGCAAGCACCTGGAGGCCCCCAGTACTCAGTG----TGAGAC-AG--GAAGTGA----------AGGGGAAGGGAAAGGGCAG--AGTGATGACGTATAGGAATG i chlSab2.chr16 C 0 I 5 s calJac3.chrUn_GL286409 831349 343 - 1291538 CAGCATTCCTGAGGGC-CCCTTAGTAGGCAGGCAAAGTTTGCTGGCTTCAGCCCTGAGCCCCAAGATTCAGATCCTCTCAAGCCCTTCTTGGAGAGCCTAACTCAGGGGAGTGGACAGGCCCACCAAGCAGGGTGACTCTTGCTCAGCTCCTGCAAGGGGAGACCTGGCCCCACAGGCCT-CCCAGAGACAAGGCCCTGGA-CTGCCACCAGCTACTCCCA-AAGGGACATCTGTGGCCGTGGTAGGGCCAAGATGCCATGAGCAACCACCTGGAGGCTCCCAGTACTCAGTG----TGAGCC-AG--GAAGCAG----------AGAGGAGGGTAAAGGGCAG--AGTGAGGACGTGGAGAAATT i calJac3.chrUn_GL286409 M 948 C 0 s mm10.chr11 75770727 271 + 122082543 CTGTGCTCCTGA-----ATCCCAGTTGGCAGGAGGCAGTTGGGAGCTTCAAGACTGA---CCAGTGTCC---TACCCTT-------TCCTAGA------AACTGAGG--------------------CCAGAG-------TTCTCAGCTCCTG-AGGGCAGAACCCCCATCCCTCCACCTTCCCCCAAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGA-------------CTGTCTTGATAGGGCCAGGATGCCATAGGTAGCCG--TGAAGGACCT-AACAC-CAGCT----TGAGCTGAG--GGGATGA----------AGAAGGGAGGGACAGGTGGGCAGGAGGGATG---------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15587280 320 - 61074082 CGGCAGTCTTGAAGTC-TCCTTGGTAGGCAGGAAAAGCTTG-GGGCTTCCTACTTGGGCTCCAAAATCCCGATACCCTCCATCT---------------GACTCAGGGT----GCCAGGCCCACCAAGCAGGG---GTCTCTCTTGGCTCTTG-GAAGCGGGATCCAGCCTCACAGGCCTTCCCAGAAATGAGGCCCGGGA-CTCCCACCCAGCACTCCCGAAAGGGACACCAGTGGCCCCAGCAGAGCCAGGATG-TATGGGTA-TCACCTGGGCCTCTC----ACTCCCTGGCCCTGAACT-CA--GAAGTGGGGGGTGGGCAAAGGGGAGGAAAAGGTGAA--GATGAGGATTT--------- i canFam3.chr9 C 0 C 0 e panTro4.chr17 76328 2534 + 82630442 M a score=25480.000000 s hg38.chr17_GL383563v3_alt 86314 22 + 375691 CTTGCTTTTTTTCCCA----AGCACA-- s ponAbe2.chr17_random 3472988 22 - 17838096 CTTGCTTTTTTTTCCA----AGCACA-- i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 13341 21 + 80904711 TTTGCTTTTTCT-CCA----AGCACA-- i rheMac3.chr16 I 2 C 0 s macFas5.chr16 13255 21 + 80997621 TTTGCTTTTTCT-CCA----AGCACA-- i macFas5.chr16 I 2 C 0 s papAnu2.chr16 25588 21 + 74645514 CTTGCttttttt-CCA----AGCCCA-- i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 18194 21 + 75148670 CTCGATTTTTCT-CCA----AGCACA-- i chlSab2.chr16 I 5 C 0 s calJac3.chrUn_GL286409 831692 19 - 1291538 CTTGCTTTTT---CCA----AGCAAA-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75770998 22 + 122082543 CTTGCTTCTTT--CCACATTAGTA---- i mm10.chr11 C 0 C 0 s canFam3.chr9 15587600 22 - 61074082 TTTGCTTCTTT--TCA----TGAAAAAA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 39930 151 - 81552678 I e panTro4.chr17 76328 2534 + 82630442 M a score=194174.000000 s hg38.chr17_GL383563v3_alt 86336 83 + 375691 -------AGGGACCCTTTTC----TCCACTGCAGCTGACCTGATGCTTATGCCAGGAAGGAGGA-GGGGCGGGCTCCGTCCTTGAGGTCCCTCAG s ponAbe2.chr17_random 3473010 83 - 17838096 -------AGGGACCCTTTTC----TCCACTGCAGCTGACCTGATGCTTATGCTGGAAAGGAGGA-GGGGCGGGCTCCATCCTCGAGGTCCCTCAG i ponAbe2.chr17_random C 0 I 10 s nomLeu3.chr19 40081 82 - 81552678 -------AGGGACCCTTTCC---TTCCATTGCAGCTGA-CTGATGCTTATGCCGGGAAGGAGGA-GGGGAGGGCTCCGT-CTCGAGGTCCCTCAG i nomLeu3.chr19 I 151 C 0 s rheMac3.chr16 13362 79 + 80904711 -------AGGGA-CCCTTTC----TCCACTGCAGTTGACCTGATGCTTACGCCGGGA---AGGA-GTGGCGGGCTCCGTCCTCCAGGTCCCTCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 13276 79 + 80997621 -------AGGGA-CCCTTTC----TCCACTGCAGTTGACCTGATGCTTACGCCGGGA---AGGA-GTGGCGGGCTCCGTCCTCCAGGTCCCTCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 25609 80 + 74645514 -------AGGGACCCCTTTC----TCCACTGCAGTTGACCTGATGCTTACGCCGGGA---AGGA-GTGGCGGGCTCCATCCTCGAGGTCCCTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 18215 83 + 75148670 -------AGGGACCCCTTTC----TCCACTGCAGTTGACCTGATGCTTACGCCGGGAAGGAGGA-GCGGCGGGCTCCGTCCTCGAGGTCCCTCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 831711 82 - 1291538 -------AGGGACCCTCTTC----TCCACTGCAGTTGACTTGATGCTTATGCAGGGAAAGAGGAGGGGGTGGGCT--GTCCTTGAGGTCCGTCAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75771020 78 + 122082543 ---------GGATCCCTTTCTCATTCCCCTGAAGCTGACTGGGAATTTACGCTGAGAAC-AGGA-GCAGTGTGC------ATTGAGACCCCTTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15587622 90 - 61074082 AGGGGGGGGGGATCCTTTTC----TTGATGATAGCTGACCTCATGCTTATGCTAGTAAGAATGA-AAGGCAGGATCCATCCTCGAAGCTCCTTGG i canFam3.chr9 C 0 C 0 e panTro4.chr17 76328 2534 + 82630442 M a score=208468.000000 s hg38.chr17_GL383563v3_alt 86419 115 + 375691 GAGTAGAAAGAGATCAGA-GTGGGAGACTTGGGTCTGAGGTCTGAACTTGAGC---CTACACCAG------TTTCTCCATGGTGTTTCCATCACGTCCCCC------------------------------------------------------------------------------ACCTCCTGCCTCGAGCCTCACACC s nomLeu3.chr19 40163 121 - 81552678 GAGTAGAAAGAGATGGAA-GTGGGAGACTTGGGTCTGAGGTCTGAACTTGACC---CTGCACCAGCACCAGTTTCTCCATGGTGCTCCCATCACTTCCCCC------------------------------------------------------------------------------ACCTCCTGCCTCGAGCCTCACACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 13441 120 + 80904711 GAGTGGAAAGAGATCAAA-GTGGGAGACTTGGGTCTGAGGTCTGAACTTGGCC---CCGCACCAGCACCAGTTTATCC-TGGTGCTTCCATCACTTCCCCC------------------------------------------------------------------------------ACCTCCTGCCTCGAGCCTCACACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 13355 120 + 80997621 GAGTGGAAAGAGATCAAA-GTGGGAGACTTGGGTCTGAGGTCTGAACTTGGCC---CCGCACCAGCACCAGTTTATCC-TGGTGCTTCCATCACTTCCCCC------------------------------------------------------------------------------ACCTCCTGCCTCGAGCCTCACACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 25689 120 + 74645514 GAGTGGAAAGAGATCAAA-GTGGGAGACTTGGGTCTGAGGTCTGAACTTGGCC---CTGCACCAGCACCAGTTTCTCC-TGGTGCTTCCATCACTtccccc------------------------------------------------------------------------------acctcctgcctcaagcctcacACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 18298 120 + 75148670 GAGTGGAAAGAGATCAAA-GTGGGAGACTTGGGTCTGAGGTCTGAACTTGGCC---CCGCACCAGCACCAGTTTCTCC-TGGTGCTTCCATCACTTCCCCC------------------------------------------------------------------------------ACCTCCTGCCTCGAGCCTCACACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 831793 115 - 1291538 GTGGAGAAAGAGATCGAA-GTGGGAGACTTGCGTCTGAAGTCTGACGTTGACC---CTGCACCAACG------TCTCCATGGTGCTTCCGTCACTTCCCCC------------------------------------------------------------------------------ACCTCCTGCCTCGAGCCTCACGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75771098 76 + 122082543 -----GAGCAAGATCAAA-TGGGAGAGCTTGGGTTTGAACATTG----------------------------TTTCCC-AAGTGCTTGTA-CACATCCC-------------------------------------------------------------------------------------------TAAGCCTAGCTCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15587712 198 - 61074082 --GAGGAGAAAGATTAAAGGTGGGAGAACTGGGTCTAAGGACTGAACTTGACCCTGCTGCCCCAAGATCAGTTTCACCACAGTGCTTCCATCACTTCCCCCCAAGCTATGAGCTGAGGCTGGCCTGGCAGGCAggggtgggggttggagcaggggtgggggttggagcaggggtgggTGACATCCTG---TAGGCCCCACTCC i canFam3.chr9 C 0 C 0 e ponAbe2.chr17_random 3473093 10 - 17838096 I e panTro4.chr17 76328 2534 + 82630442 M a score=3448235.000000 s hg38.chr17_GL383563v3_alt 86534 1423 + 375691 -TTCCTAACAAACC----CTCCCCTGGAGAGGAGACCCTGGG--TC---CACAGCA-CCCCGGCCCCATTGGCtttctct---ctccaggcgtttt----agaccactcccactgcctggactgcttttag-----aagccctcactcaccctccaaggccttacggaagcaccgcctcctccaggaagccgtccctgacctcc------cggcagagtcagcagagcccacggtacttgcagactggccaagctggtcttggtatttctca-ccccagttggaatggtttgtt--cccagcttcctgactagat-gggaactccctgagggcaggccctgtgtctcattcaccCCC-AGGGCTTGTGGAATCATTGAGTGAAGCATGTGCCAATTTACCCA---TCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGC-TTCTTCCATCTGTCCAGCA-GCGAAGGAGATGAG-GGATGCAGTTAG--GCTTTCTTGGGCT-------GGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACCTCCCTCCTCT--GTTCCCACTGTCCG--CCAAGGCGCCCCCACACTCCTGTCCTCTCAGCCGGG-----------------GCTGGCCTCTAGAAGGGTCTTTGCT-CCCAGATGGGCGTGTCCCCTTCCCCTGG-----GCAGGTGCTGA------GGTCTCTTTCCACCACCGGCC-TCTTGGGC-CCCAGAGAGCTG--AGAGCC--CCCCACC--CCAGCTCCTTGCCCTCCCCGTCCC--AGAGTGGCTGAGCCCTCCACATCCTCCGAGCGGGGACTGCAGTGGCTCTGTGTCCAAGCAGGGGTTCTGGATCTCCCCCAGTGTGGGGGCCACAGGCCTTGGTGGCTGCTGGGGAAGCCCGGGGCCGGCC--GTGCTGGGCGCAGGTGGC-GGCAGGGGTA---GCAGTGGCGGGTGGG----CGTCAGTCGCTGAGCACAGCCCCTGGGAGCTCGCTGGTGAGCGTGTGCCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAACCAGTGCTTCAGGCGCTCCCCCTTGGCGTGGATGCCCAGAACCACACCACCTGCAGGAG-GACAG---GAGGGGCAGCT------------------------------GGGGCACAGGGACCCCC-AACTCCCAGGCG----------------------------------TGGGGCCCATGC----------------CCCCTCCCAGGTTCTGTGCTCGAAGGCCAGCCTCTCC-CACTGCCCGCTGGGTTCTGAGCATGAACAG-GACCTGACCTCCATGCCACACTCTGGCCCCG------------------TCAGGGCCCAGC------CATCCTGTCTCTCTTCCACCAggg-cagggata----ggggcagggtgcagaggcagcatcaggggTCAAGGAATGGGGGCCTGAAGAGGGGAGAAAGGGCCGGGCAGCCCCA---CTATGCGCAGCCACCAGGCCCACTGGGAATTTGGG-GCC-TCTAGGGCT----------CAGAGTCCAGCCCGA----GGCACTGCCCATCATTGTCTCTTGTCTGTGCTCC s ponAbe2.chr17_random 3473103 1456 - 17838096 -TTCCTAACACACC----CTCCCCCGGAGAGGAGACCCTGGG--TC---CACAGCA-CCCCGGCCCCATTGGCtttctct---ctccaggcctttt---tagaccactcccactgcctggactgcttttag-----aaccctccactcaccctccaaggccttacagaaacagtgcctcctccaggaagccttccctgacttcc------cggcagagtcagcagagcccacggtacttgcagactggccaagctggtctcggtatttctca-ccccagttggaatggtt-gtt--cccagcttcctgactagat-gggaactccctgagggcaggccctgtgtctcattcaccCCC-AGGGCTTGTGGAATCATTGAGTGAAGCATGTGCCAATTTACCCG---TCATCAGGAGCCTCCGGGAACTCTGGCAGACTTTCAGCCAGCAGGCCCGC-TTCTTCCATCTGCCCAGCA-GCGAAGGAGATGAG-GGATGCAGTCAG--CCTTTCTTGGGCT-------GGAGCAGCCAGTCTTCAAGGTCCCATCCTCCACCTGTCTGTCTGCTTACCACCTCCCTCCTCT--GTTCCTACTGTCCC--CCAGGGCGCCCCCACACTCCTGTCCTCTCAGCCTGG-----------------GCTGACCTCTAGAAGGGTCTTTGCT-CCTAGATGGGCCTGTCCCCTTCCCCTGG-----GCAGGTGCTGA------GGTCTCCTTCCACCACCGGCC-TCTTGGGC-CC-AGAGGGCTG--AGAGCCTCCCCCACCGCCCAGCTCCCCGCCCTCCCCGTCCC--AGAGTAGCTGAGCCCTCCACGTCCTCCGAGCGGGGACTGCAGTGGCTCTGTGTCCAAGCAGGGGTTCTGGATCTCCCCCAGTGTGGGGGCCACCGGCCTTGGTGGCTGCTGGGGAAGCCCAGGGCCGGCC--GTGCTGGGCGCAGGTGGC-GGCAGGGGTA---GCAGTGGCGGGCGGG----CGTCAGTCGCTGAGCACGGCCCCCGGGAGCTCGCTGGTGAGCGTGTGCCAGCGCTCAATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAACCAGTGCTTCAGGCGCTCCCCCTTGGCGTTGATGCCCAGAACCACGCCACCTGCGGGAG-GACAG---GAGGGGCAGCTAGGGCACAGGGACGCGCGACTCCCAGGCGTGGGGCACAGGGACGCGC-GACTCCCAGGCG----------------------------------TGGGGCCCGTGC----------------CCCTTCCCAGGTTCTGTGCTCCAAGGCCAGACTCTCC-CACTGCCCACTGGGTTCAGAGCATGAACAG-GACCTGACCTCCATGCCACACTCTGCCCCCA------------------TCAGGGCCCAGC------CATCCTGACTCTCTTCCACCAGGG-CAGGGATA----GGGGCAGGGTGCAGAGGCAGCATCAGGGGTCAAGGAATGGGGACCTGAAGAGGGGAGAAAGGGCCAGGCAGCCCCA---CTATGCACAGCCACCAGGCCCACCAGGAATCTGGG-GCC-TCTAGGGCT----------CAGAGTCCAGCCCGA----GGCACTGCCCATCATCGTCTCTTGTCTGTGCTCC i ponAbe2.chr17_random I 10 C 0 s nomLeu3.chr19 40284 1389 - 81552678 -TTCCTAACAAACC----CTCCCCCGGAGAGGAGACCCTGGG--TC---CACAGCA-CCCCGGCCCCATTGGCtttctct---ctccaggcctttt---tagaccactcccactgcctggactgcttttag-----aa-cccccactcaccctccaaggccttacggaaacaccgcctgctccaggaagccttccctgacctcc------cgacagagtcagcagagcccacggtacttgcagactggccaagctggtctcggcatttctca-ccccagttggaatggtttgtt--cccagcttcctgactagat-gggaactccctgagggcagaccctgtgtctcattcaccCCC-AGGCCTTGTGGAATCATTGAGTGAAGCATGTGCCAATTTACCCG---TCATCAGGAGACTCCAGGAACTCTGGCAGACTTTCGGCCGGCAGGCCCGC-TTCTTCCGTCTGCCCAGCA-GCGAAGGAGACGAG-GGATGCAGTCAG--CCTTTCTTGGGCC-------GGAGCAGCCAGTCTTCAAGGTCCCGTCGTCCAC----CTGTCTGCTCACCACCTCCCTCCTCT--GTTCGCACTGTCCC--CCAGGGCACCCCCACACTCTTGTCCTCTCAGCCTGG-----------------GCTGGCCTCTAGAAGGGTCTTTGCT-CCCAGACGGGCCTGTCCCCTTCCCCTGG-----GCAGGTGCTGA------GGTCTCCTTCCACCACCGGCC-TCTTGGGC-CCCAGAGGGCTG--AGAGCC--ACCC-----CCAGCTCCCTGCCCTCCCCATCCC--AGAGTGGCTGAACCCTCCACGTCCTCCGAGCGGGCACTGCAGTGGCTCTGTGTCCAAGCAGGGGTTCTGGATCTCCCCCTTTGTGGGGGCCACAGGCCTTGGTGGCTGCTGGGGAAGCCCGGGGCCGGCT--GTGCTgggcgcaggcggc-ggcaggggta---gcggtcgggggcggg----CGTCAGTCGCTGAGCACGGCCCCCGGGAGCTCGCTGGTGAGTGTGTGCCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAACCAGTGCTTCAGGCGCTCCCCCTTGGCGTTGATGCCCAGAACCACGCCACCTGCGGGAG-GACAG---GAGGGGCAGCT------------------------------GGGGCACCGGGAC-CCC-GACTCCCAGGCG----------------------------------TGG------------------------------------------GCTCCAGGGCCAGCCTCTCC-CACTGCCCGCTGGGCTCTGAACATGAACAG-GACCTGACCTCCATGCCACACTCTGGCCCCG------------------TCAGGGCCCAGC------CATCCCGTCTCTCTTCCACCAGGG-CAGGGATA----GGGGCAGGGTGCAGAGGCAGCATGAGGGGTCAAGGAATGGGGGCCCGAGGAGGGGAGAAAGGGCCGGGCAGCCCCA---CTATGCACAGCCACCAGGCCCACCAGGAATTTGGG-GCC-TCTAGGGCT----------CAGAGTGCAGCCCGA----GGCACCGCCCATCATCGTCTCTTGTCTGTGCTCC i nomLeu3.chr19 C 0 M 4636 s rheMac3.chr16 13561 1371 + 80904711 -TTCCTAACAAACC----CTGCCTCGGAGAGGAGACCCTGGG--TC---CACAGTT--CCCAGCCCCATCGGCCTTCTctctcctccaggcctttt---tagacc-----------------------tag-----aactccccactcaccctccaaggccttacagaagcaccgcttcctccaggaagccttccctgacctcc------cagc--agtcagcagagtccgtggtatttgcagactggccaggctggtctcggtatttctcg-ccccagttgcagtggtttgtt--cccagctccctgactagac-agaaactccctgagggcaggccctgtgtctcaCCCTCCCGC-AGGGCTTGTGGAATCACTGTG-GAAGCCTGTGCCAATTTACCC----TCATCAGGAGCCTCCGGGAACTCC-GCAGACT-------------------TTCCTCCATCGGCCCAGCA-GCGATGGAGATGAG-GGATGCGGTCAG--CCTTCCTTGGGCT-------GGAGCAGTCGGTCTTCAGGGTCCCATCCTCCACCTGTCTGTCTGCTCACCACCTCCCTCCTCT--GTTCCCACTGTCCC--CCAGGGTGCCCCCACACTCCTGTCCCCTCAGCCTGG-----------------GCTGGCCTCCAGAA-GGTCTTTGCT-CCCGGATGGGCCTGTCCCCTTCCCCTGG-----GCAGGTGCTGA------GGTCTCCTTCCACCATCAGCC-CCTTGGGC-CCCAGAGGGCTG--AGAGT---ACCC-----CTAGCTGCCTGCCCTCCCCGTCCC--AGAGCGGCTGAGCCCTCCACATCCTCCGAGCGGGGACTGCAGTGGCTCTGGGTCCAAGCAGGGGTTCTGGA--TCCCCCAGTGTGGGGGCCACAGGCCTTGGTGGCTGCTGGGGAAGCCT-GGGCCGGCC--GTGCTGGGCGCAGGTGGT-GGTGGGGGTG---GCAGTGGCAGGCGGG----CGTCAGTCGCTGAGCGCGGCCCCCGGGAGCTCGCTGGTGAGTGTGTGCCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAACCAGTGCTTCAGGCGCTCCCCCTTGGCGTTGATGCCCAGAACCACGCCACCTGCGGGAG-GACAG---GAGGGGCAGCC------------------------------GG-GCACAGGGACCCCC-GACTCCCAGGCG----------------------------------TGGGACCCGTGC----------------CCCCTCCCAGGTTCTGTGCTCAAAGGCCAGCCTCTCC-CACTGCCTGCTGGGTTCCGAGCATGAACAG-GACCTGCCCTCCATGCCACACTCCAGCCCCG------------------TCAGGGCCCAGC------CATCCTGTCCCTCTTCCACCAGGG-CAGGGATA----GGGGCAGGGTGCAGAGGCAGTGTCAGGGGTCAAGGAATGGGGCCCGAAGGGGGGGAGAAAGGGCCGGGCAGCCCCA---CTGTGCGCAGCCACCAGGCCCACCAGGAATCTGGG-GCC-TCTAGGGTT----------CAGAGTCCAGCCCGA----GGCACTGCCCATCATCGTCtcttgtctgtgctcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 13475 1372 + 80997621 -TTCCTAACAAACC----CTGCCTCGGAGAGGAGACCCTGGG--TC---CACAGTT--CCCAGCCCCATCGGCCTTCTctctcctccaggcctttt---tagacc-----------------------tag-----aactccccactcaccctccaaggccttacagaagcaccgcttcctccaggaagccttccctgacctcc------cagc--agtcagcagagcccgtggtatttgcagactggccaggctggtctcggtatttctcg-ccccagttgcagtggtttgtt--cccagctccctgactagac-agaaactccctgagggcaggccctgtgtctcaCCCTCCCGC-AGGGCTTGTGGAATCACTGTG-GAAGCCTGTGCCAATTTACCC----TCATCAGGAGCCTCCGGGAACTCC-GCAGACT-------------------TTCCTCCATCGGCCCAGCA-GCGATGGAGATGAG-GGATGCGGTCAG--CCTTCCTTGGGCT-------GGAGCAGTCGGTCTTCAGGGTCCCGTCCTCCACCTGTCTGTCTGCTCGCCACCTCCCTCCTCT--GTTCCCACTGTCCC--CCAGGGTGCCCCCACACTCCTGTCCCCTCAGCCTGG-----------------GCTGGCCTCCAGAA-GGTCTTTGCT-CCCGGATGGGCCTGTCCCCTTCCCCTGG-----GCAGGTGCTGA------GGTCTCCTTCCACCATCAGCC-CCTTGGGC-CCCAGAGGGCTG--AGAGC---ACCC-----CTAGCTGCCTGCCCTCCCCGTCCC--AGAGCGGCTGAGCCCTCCACGTCCTCCGAGCGGGGACTGCAGTGGCTCTGGGTCCAAGCAGGGGTTCTGGA--TCCCCCAGTGTGGGGGCCACAGGCCTTGGTGGCTGCTGGGGAAGCCT-GGGCCGGCC--GTGCTGGGCGCAGGTGGC-GGTGGGGGTG---GCAGTGGCAGGCGGG----CGTCAGTCGCTGAGCGCGGCCCCCGGGAGCTCGCTGGTGAGTGTGTGCCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAACCAGTGCTTCAGGCGCTCCCCCTTGGCGTTGATGCCCAGAACCACGCCACCTGCGGGAG-GACAG---GAGGGGCAGCC------------------------------GGAGCACAGGGACCCCC-GACTCCCAGGCG----------------------------------TGGGACCCGTGC----------------CCCCTCCCAGGTTCTGTGCTCAAAGGCCAGCCTCTCC-CACTGCCTGCTGGGTTCCGAGCACGAACAG-GACCTGCCCTCCATGCCACACTCCAGCCCCG------------------TCAGGGCCCAGC------CATCCTGTCCCTCTTCCACCAggg-cagggata----ggggcagggtgcagaggcagtgtcaggggtcaaggaatggggcCCGAAGGGGGGGAGAAAGGGCCGGGCAGCCCCA---CTGTGCGCAGCCACCAGGCCCACCAGGAATCTGGG-GCC-TCTAGGGTT----------CAGAGTCCAGCCCGA----GGCACTGCCCATCATCGTCTCTTGTCTGTGCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 25809 1393 + 74645514 -TTCCTAACAAACC----CTGCCTCGGAGAGGAGACCCTGGG--TC---CATGGTT-CCCCAGCCCCATTGgccttctctctcctccaggcCTTTT---TAGACC-----------------------TAG-----AACTCCCCACTCACCCTCCAAGGCCTTACAGAAGCACCGcgtcctccaggaagccttccctgacctcc------cgGC--AGTCAGCAGAGCCCATGGCATTTGCagactggccaggctggtctcagtatTTCTCG-CCCCAGTTGGAGTGGTTTGTT--CCCAGCTCCCTGACTAGAC-GGgaactccctgagggcaggccCTGTGTCTCACCCACCCAC-AGGGCTTGTGGAATCATTGAGTGAAGCCTGTGCCAATTTACCC----TCATCAGGAGCCTCTGGGAACTCT-ACAGACTTTCGGCCGGCAGGCCCGC-TTCTTCCATCGGCCCAGCA-GCGATGGAGATGAG-GGATGTGGTCAG--CCTTCCTTGGGCT-------GGAGCCGTCGGTCTTCAAGGTCCCGTCCTCCACCTGTCTGTCTGCTCACCACCTCCCTCCTCT--GTTCCCACTGTCCC--CCAGGGTGCCCCCACACTCCTGTCCTCTCAGCCCGG-----------------GCTGGCCTCCAGAA-GGTCTTTGCT-CCCAGATGGGCCTGTCCCCTTCCCCTGG-----GCAGGTGCTGA------GGTCTCCTTCCACCACCGGCC-TCTTGGGC-CCCAGAGGGCTG--AGAGC---ACCC-----CCAGCTCCCTGCCCTCCCCGTCCC--AGAGTGGCTGAGCCCTCCACGTCCTCCGAGCGGGGACTGCAGTGGCTCTGGGTCCAAGCAGGGGTTCTGGATCTCCCCCAATGTGGGGGCCACAGGCCTTGGTGGCTGCTGGGGAAGCCT-GGGCCGGCC--GTGCTGGGCGCAGGTGGC-GGTGGGGGTG---GCAGTGGCAGGCGGG----CGTCAGTCGCTGAGCACGGCCCCCGGGAGCTCGCTGGTGAGTGTGTGCCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAACCAGTGCTTCAGGCGCTCCCCCTTGGCGTTGATGCCCAGAACCACGCCACCTGCGGGAG-GACAG---GAGGGGCAGCC------------------------------GGGGCACAGGGACCCCC-GACTCCCAGGCG----------------------------------TGGGACCCGTGC----------------CCCCTCCCAGGTTCTGTGCTCAAAGGCCAGCCTCTCC-CACTGCCCGCTGGGTTCCGAGCATGAACAG-GACCTGCCCTCCATGCCACACTCCAGCCCCG------------------TCAGGGCCCAGC------CATCCTGTCCCTCTTCCACCAGGG-CAGGGATA----GGGGCAGGGTGCAGAGGCAGTGTCAGGGGTCAAGGAATGGGGCCCGAA-GAGGGGAGAAAGGGCCGGGCAGCCCCA---CTGTGCGTAGCCACCAGGCCCACCAGGAATCTGGG-GCC-TCTAGGGTT----------CCGAGTCCAGCCCGA----GGCACTGCCCATCATCGTCTCTTGTCTGTGCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 18418 1366 + 75148670 -TTCCTAACAAA-C----CTGCCTGGGAGAGGAGACCCTGGG--TC---CACAGTT--CCCAGCCCCATTGGCCTTCTctctcctccaggcctttt---tagacc-----------------------tag-----aactccccactcaccctccaaggccttacagaagcaccacttcctccaggaagccttccctgacctcc------cagc--agtcagcagaacccatggtatttgcagactggccaggctggtctcggtatttctcg-ccccagttggagtggtttgtt--cccagctccctgactagac-gggaactccctgagggcaggccctgtgtctcacccaccCGC-AGGGCTTGTGGAATCATTGAGTGAAGCCTGTGCCAATTTACCC----TCATCAGGAGCCTCCGGGAACTCT-GCAGACTTTCGGCCGGCAGGCCCGC-TTCTTCCATCGGCCCAGCA-GCGATGGAGATGAG-GGATGCGGTCAG--CCTTTCTTGGGCT-------GGAGCAGTCGGTCTTCAAGGTCCTGTCCTCCACCTGTCTGTCTGCTCACCACCTCCCTCCTCT--GTTTCCACTGTCCC--CCAGGGTGCCCCCACACTCCTGTCCTCTCAGCCTGG-----------------GCTGGCCTCCAGAA-GGTCTTTGCT-CCCAGATGGTCCTGTCCCCTTCCCCTGG-----GCAGGTGCTGA------GGTCTCCTTCCACCACCGGCC-TCTTGGGC-CCCAGACGGCTG--AGAGC---ACCC-----CCAGCTCCCTGCCCTTCCCGTCCC--AGAGTGGCTGAGCCCTCCACGTCCTCCGAGCAGGGACTGCAGTGGCTCTGGGTCCAAGCAGGGGTTCTGGATCTCCCCCAATGTGGGGGCCACAGGCCTTGGTGGCTGCTGGGGAAGCCT-GGGCCGGCC--GTGCTGGGCGCAGGTGGT-GGTGGGGGTG---GCAGTGGCAGGCGGG----CGTCAGTCGCTGAGCACGGCCCCCGGGAGCTCGCTGGTGAGTGTGTGCCAGCGCTCGATGCGCTTGTCCTTGTTCTTCAGGCAGTCAAACCAGTGCTTCAGGCGCTCCCCCTTGGCGTTGATGCCCAGAACCACGCCACCTGCGGGAG-GACAG---GAGGGGCAGCC------------------------------GGGGCCCAGGGACCCCC-GA---------------------------------------------------------------------------CTCCCAGGTTCTGTGCTCAAAGGCCAGCCTCTCC-CACTGCCCGCTGGGTTCCGAGCACGAACAG-GACCTGCCCTCCATGCCACACTCCAGCCCCG------------------TCAGGGCCCAGC------CATCCTGTCCCTCTTCCACCAggg-cagggata----ggggcagggtgcagaggcagtgtcaggggTCAAGGAATTGGGCCCAAA-GCGGGGAGAAGGGGCCGGGCAGCCCCA---CTGTGCGCAGCCACCAGGCCCGCCGGGAATCTGGG-TCC-TCTAGGGTT----------CAGAGTCCAGCCCGA----GGCCCTGCCCATCATCGTCTCTTGTCTGTGCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 831908 1350 - 1291538 -TTCCTAACAAACC----CTGGCCCAGTGAGGAGGCCCTGGG--TC---TGCAGCT-CCCTGATCCCATCAGCTTTCTCTCTCCTCCAAGCCTTTG---T-GACC----------------------------------------------------------ACACAAATACTGGGACTGC-------TTTTCCCTGACCTCT------CAGC--AGTAAACAGAGCCCAAGGTACTTGCAGACTAGCCAGGCTGGTCTTGGTATTTCTTG-CCACAGTTGGAATGgtttgtt--cccagttccct-----gat-gggaactccctgagggcaggccctatgtctcatttaccccc-agtgcttgTGGAATCACTGAGTGAAGCATGTACCAGTCTGCCCC---TCATCAGGAGCCTCGGGGAACTCTGGCAGACTTCTGGCTTGCAGGCCCGC-TTCTTCCACCTGCCCAGCAGGTGACAGAGATGAG-GGATGCAGTCAG--TCTTTCTTGGGCTACATCTGGGAGCAGCCGATCTTCAAGGTCTCATCCTCCACCTGCCTGCCTCCTCACCACCTCCCTCCTCC--GTTCCCATTGCCCC--TCAGCATG-ACCCGCACTCCTGTCCTCTCAGCCTGG-----------------GCTGGCCTCTAGAAGGGCCCTTGC--CCCAGGTGGCCCTGTCCCCTTCCCCTGG-----ACACATGCTGA------GGTCTCCTTCCACCACTGGCC-TCTTGGGC-ACCAGAGGGCTG--AGAGCCC-CACC-----CCAGCTCCCTGCCCTCCCCATCCC--AGAGTGGCTGAGCCCTCCAAGTCCTACACACGGGGACTGCGGTGGCTCTGCATCCAA-CAGGGGTCCTAGATCTACCCCGACGTGGGAGCCACAGGCTGTGGTGGCTGCTGGGGAAGCCTGGGGCTGGCC--GTGCTGGGCGCAGGTGGC--ACGGGGCTG---GTGGTGGTGGGCAGG----CATCAGTCGCTGAGCACAGCCCCCGGGAGCTCGCTGGTGAGTGTGTGCCAGCGCTCAATGCGCTTGTCCTTGTTCTTCAGGCAGTCGAACCAGTGCTTCAGACGCTCCCCCTTGGCATTAATGCCCAGAACCACGCCACCTGCAGGAG-GATGG---GAGGGGCAGCT------------------------------GGGGCACAGGGACCCTCTGACTCCTCGGCC----------------------------------TGGGGCCCATGC----------------TCCCTCCCAGGTTCTGTGCTCCAAGGCCGGCTTCTCC-CCCTGCCCGCTGGGTTCTGAGCTTGGACAG-GAGCTGACCTCCAAGCCATGCTCTAGCCCTG------------------T-----------------CATCCTGCCCCTCTTCCACCAGGG-CAGGGCTA----GAGGCAGGGTGCAGAGGCAGTGTCA-GGGCCAAGGAATGGGGGCTGGAAGAGGGGAGAAAGGGCCA-GCAGCCCCA---CTATGTGCAGTCACCAGGCCCACCAGGAATTTGGGAATC-CCGAGGGCT----------CAGAGTCCAGCCCAA----GGTGCTGCCCATCACCGTCTCCTGTCCCCACTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75771174 1200 + 122082543 -TGCCTAAAAGCCCAATGCTGCCCTAGC---GCAACCCTAGGCCCC---CATGGCT-CCCTGTCCCC--TGGTACCCTCT----TTCAGGCCTCCT---CTTTTC------TGTATTTGGTTTTCTCCTAGCTTTCAAGCCACAGCTGGGTTTTCAAGACTGTGCTG-AGCCCTGACTCTCATGGGATGCCTTCCTTGCCCTCCACCCTTCAGC--AGTCAGCAGTACCCACAGCCCCTGCAGACAA--CTGGCTGGTTCTGGTATGCTGCA-CCCC-TTTGTAGCAATATGTGCACCCAGATGCCCTGCTAGAG-TGGGAATCCCCG------------------------TCCCA-GAGGCTCACGGAGTC-----------TATCTGCCCATCAATGCA---CAAGCAAG-----TTGGAAGCTCTGGCTGGCT---------------------ACATTGTCTGTCCTGGA-G--------------------------------TCCTGGGCT--------------------------------------------CTGCCTGCCCATTG--TCCTCCCTGT--AGTCTC-CAGGCAG--CCAGAGTACCCC--CATTTCTGGGCTTGCAGCAGGGCTCCACC----------CCTCACCTCCAATA-GGTCCTCACT--GTAGATAG-------CCCTTCCTCTGGATGGAGCTGAGGCTGA------GGATTCC-CCCAGCTCTGGCCAGCTTGGATGCCCAGGGAGCTGGAACAGG---TATC-----ATGTTGTGTTTTCCTGTCCCTCTG--AGGGAGGCTGGGTGCTCT-TGGCCTCCTAGCAGGGGCTGCACTG--TCTATGTCCGAGCAGACAACTTGGATCTTGCCC-------------------TTGGCGGCAGCTGAGAAAGCCCAGGGTTGGAC--CTGTGTGGGCCGGGTGGC-A--AGGGTGG---GTGGCAGCAGATGGGA--CAGTCAGTCGCTGAGTACAGCCCCTGGGAGCTCATTGGTGAGCGTGTGCCAACGCTCAATCCTCTTGTCCTTGTTCTTCAAGCAGTCAAACCAGTGCTTCAGGCGCTCGCCCTTGGCGTTGATGCCCAGAACCACACCACCTGCGGAAGAGATCA---GAGGGGCAGCT-------------------------------------AGGGATTTCA-GTGCCCCCAGCG----------------------------------T-----------------------------------------------------CCAGACCC------------------ATTTGTGTGTGGACAG-CCCCTAGCTTCCA-GCCACACCCTTCCCACT------------------T---GACCCAGTGTTTGATGTCATGTTTCTCCTCTACCAGGGACCAGAACAGTGTGGGGCAGGGTTCAATGG-------------TACATAGTAGGGAGTGAAAAGGGGGAGGAAGGGCTACAGTGGCCCA---TTGTGTACCAATGTCATGCCCAC-AGAAACTTGTG-GTC-CCATGGGCT----------CTGAGTGCTGACCCACTCGGGAGTTGACCATCAT---------TCTATGTC-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15587910 1493 - 61074082 TGTCCTAACAAACT----CTGTCTC-TAGGGGAGACCTCAGG--TCTTGCACAGCAACCCTAGCCCAATCACCATACTCTTCCTTccattcctgctgcacacacc-gcccttcccctttgtctgcc--tag-----aa-actatactcacccttcaaggccttgctgaagcatcacctcctccaggaaaccctccctg-cctcc------cagcagagt---cagagtccaggccactcacaggtatgtcagccaggtcttggcattcctcattccctgttgtaatggtttgtt--tctagttccttgattagccaaggaactctcagagggcagtccctgggtctcattcatcCCCAAGGGCTCATGGAAACATTGAGTGAAGTGCTTGCCAATC-GCCCATGTTCAGTGAGAGCCTGTAGGAACTTTATCATACT--CTGCTCTCAGGTCAACTTTTTCCCACCTGCCCACTA-ATGCCAGAGATGAACAGATGTAGTAGGAACCTCTTTTTGGTA-------------------------------ATACTTTCCCAAATCTCCTTCCCCCCATATCCCTCTTGGGAGTTCTCACTGGCCCTGCCAAGGCTCCCCTGCACTCCTGT--TCTCAGCCTGGGGTCCCTGTGATTTCTGGTTGACCTCCAGTAGGGTCCTCACTCCCTGGGTGACCCCATTCCCTTCCCTGGG-----GTGGATGCTGAGGCCAGGGTCCTCTCCTACCTCCTGCC-CTCTGGGG-CCCCAGGAGCTG--AAAGC---AGGC-----CCAGCTCTCTGGTCTTGCTGTCCCTTGAAGGGACTAGGCCCTCCACAGCCTCTAAGCAGGGGCTGCGGTGGCTCTGTGTCCGAGCAGGCATCCTGGATCTCCCCCAAGATGAGGGCCGAGGCCCTTGGTGGCAGCTGAGGAGGCCCAGGGCCAGGCCGGTGCCGGGC-CAGGTGACAGGCAGGGGTGGGTGCAGCAGCAGGTGGGGGCTGGTCAGTCGCTGAGCACAGCCCCTGGGAGTTCGTTGGTGAGAGTGTGCCAGCGCTCTATCCGCTTGTCCTTGTTTTTCAGGCAGTCAAACCAGTGCTTCAGGCGTTCACCCTTAGCATTGATGCCCAGAACCACACCTCCTGCAGGAA-GGGAGTCAAGGGGGTAGCC-----------------------------AGGGACACAGTGACCTTCTGACTCCCAGGGGCCTGGGGGCAGGTACTCCCATAAGACCATCTCTCTGGAACCAGTGCCCCTCCCCCAAAACTACCCTTTCCAGATTCTGTGCTCCAAGGCTGTACTCTCTACCCTGCCCACTGGGCTCTGAGGGTGGGCAGTGGTCTGACCACCACACCACACTCTTAGCCTGCCCCCTTCCCCCACCTGATCAGGGCCCTGG------GATCCTGTCCTTCCCCTCTCCAGG-ACGGAGCA----ATGCTGGGGTGAAGT-GCAACGTCATGTTTTAGGGAATT-----------------------TCTAGTCGGCTTTATGGCTATGCATAGA----------ACCAGGAATTCAGG-GCCACCTGAAGCTTTTTGTTCCACAGAGTCCAGCCCAA----AACA----CCATCATCATCTCTCACCCCTGCTCC i canFam3.chr9 C 0 C 0 e panTro4.chr17 76328 2534 + 82630442 M a score=873072.000000 s hg38.chr17_GL383563v3_alt 87957 396 + 375691 ACCACAGAGTGCTGTGTGACCCTCCCAGAACTCCTTCCATCCC-TGGGCCTGTCTCTTCCTGGGGCACA-AGGGT-CAGGCTGGAGAAGGTCTGAGGCCCCT--GACCTAGGGGCAGGTGGTCCGTGGCTCCAGCT--TTCCCCATGGACCAGGAAAGAGGGGCTGTGGCCT-------------------------GATCCAGGACAGGCACACAGTGAGACGGTGTTCCCACTATGCCCCCTTACCAATGAAATCGTTGGATTTTCCAATGTCGTAATCCCAAACGGTGACCTCCAGGGACTTCTTGGCCAGGTCCCCATGCTTGATCTCGTAACAGAACTCCTGCTGGCAAGAAG-GGAGTGTTAGGGCTGATGCC--TGGGCCTGGGCCTCCGCCGGGGGCCAGGAGGGGTATGAGGTGTAGGGACA---------------------- s ponAbe2.chr17_random 3474559 398 - 17838096 ACCACAGAGTTCTGTGTGACCCTCCCAGAACTCCTTCCGTCTC-TGGGTCTGTCTCTTCCTGAGGCACA-AGGGT-CAGGCTGGAGAAGGTCTGAGGCCCCT--GACCTGGGGGCAGGTGGTCCGTGGCTCCAGCT--TTCCCCAGGGGACAGGAAGGAGGGGCTGTGGCCT-------------------------GATCCAGGACAGGCACACAGCAAGACAGCGTTCCCACTATGCCCCCTTACCAATGAAATCGTTGGATTTTCCAATGTCGTAATCCCAAACAGTGACCTCCAGGGACTTCTTGGCCAGGTCCCCATGCTTAATCTCGTAACAAAACTCCTGCTGGCAAGAAG-GGAGTGTTAAGGCTGATGCCACGAGGCCTGGGCCTCGGCCGGGGGCCAGGAGGGGTATGAGGTGTAGGGAAA---------------------- i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 14932 400 + 80904711 accacacagtgctgtgtggccctcccagaacgccttccctctc-tgggcctgtctcttcctagggcaca-gcgct-caggctggagaaggtctgaggcccctcaggtctgGGGGCAGGTGGTCCGTGGCTCCAGCT--TCCCCCAGGGACCAGGAAGGAGGGGCTGTGGCCT-------------------------GATCCAGGACAGGCACACAGCGAGACGGTGCTCCCACTGTGCCCCCTTACCAATAAAATCGTTGGATTTTCCAATGTCGTAATCCCAAACGGTGACCTCCAGGGACTTCTTGGCCAGGTCCCCATGCTTAATCTCGTAACAGAACTCCTGCTGGGCGGAAG-GGAGCGTTCGGGCTGATGCCACGAGGCCTGGGCCTCGGCCGGCGGCCAGGAGGGGTATGAGGTGTAGGGAAA---------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 14847 400 + 80997621 ACCACACAGTGCTGTGTGGCCCTCCCAGAACGCCTTCCCTCTC-TGGGCCTGTCTCTTCCTAGGGCACA-GCGCT-CAGGCTGGAGAAGGTCTGAGGCCCCTCAGGTCTGGGGGCAGGTGGTCCGTGGCTCCAGCT--TCCCCCAGGGACCAGGAAGGAGGGGCTGTGGCCT-------------------------GATCCAGGACAGGCACACAGCGAGACGGTGCTCCCACTGTGCCCCCTTACCAATAAAATCGTTGGATTTTCCAATGTCGTAATCCCAAACGGTGACCTCCAGGGACTTCTTGGCCAGGTCCCCATGCTTAATCTCGTAACAGAACTCCTGCTGGGCGGAAG-GGAGCGTTCGGGCTGATGCCACGAGGCCTGGGCCTCGGCCGGCGGCCAGGAGGGGTATGAGGTGTAGGGAAA---------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 27202 400 + 74645514 ACCACACAGTGCTGTGTGGCCCTCCCAGAACTCcgtccctctc-tgggcctgtctCTTCCTGGGGCACA-GCGCT-CAGGCTGGAGAAGGTCCGAGGCCCCTCAGGTCTGGGGACAGGTGGTCGGTGGCTCCAGCT--TCCCGAAGGGACCAGGAAGGAGGTGCTGTGGCCT-------------------------GATCCAGGACAGGCACACAGCGAGACGGTGCTCCCACTGTGCGCCCTTACCAATAAAATCGTTGGATTTTCCAATGTCGTAATCCCAAACGGTGACCTCCAGGGACTTCTTGGCCAGGTCCCCGTGCTTAATCTCGTAACAGAACTCCTGCTGGGCAGAAG-GGAGCGTTAGGGCTGATGCCACGAGGCCTGGGCCTCGGCCGGTGGCCAGGAGGGGTATGAGGTGTAGGGAAA---------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 19784 400 + 75148670 GCCACACAGTGCTGTGTGACCCTCCCAGAACTCCTTCCCTCTC-CGGGCCTGTCTCTTCCTGGGGCACA-GCGCT-CAGGCTGGAGAAGGTCTGAGGCCCCTCAGGTCTGGGGGCAGGTGGTCCGTGGCTCCAGCT--TCCCCCAGGGACCAGGAAGGAGGGGCTGTGGCCG-------------------------GATCCAGGACAGGCACACAGCGACACGGTGCTCCCACTCTGCCCCCTTACCAATAAAATCGTTGGATTTTCCAATGTCGTAATCCCAAACGGTGACCTCCAGGGACTTCTTGGCCAGGTCCCCATGCTTAATCTCGTAACAGAACTCCTGCTGGTCAGAAG-GGAGTGTTCGGGCTGATGCCACGAGGCCTGGGCCTCGGCCGGTGGCCAGGAGGGGTATGAGGTGTAGGGAGA---------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 833258 377 - 1291538 ATCACAGACTGCTGTGTGGCCCTCCCACAACTCCTTCCCTCTC-TTGGCCTGTCCCTTTCTGGGGCACA-GGGGT-CAGGCTGGAGAAGGTCTGA----------------GGGCAGTTGGTCTGTGGCTCCAGCT--TTCCCCAGGGGCCAGGAAGGAGGGTCAGTGGCCT-------------------------AAGCCAGGACAGG----CAGCGAGACAGTGTTCCCACTGTGCCCCCTTACCAATGAAATCGTTGGATCTCCCAATGTCGTAATCCCACACGGTGACCTCCAGGGACTTCTTGGCCAGGTCCCCATGCTTAATCTCATAGCAGAACTCCTGCTGGCCAGAAT-GGA--GTTAGCGCTGATGCCACGAGGCCTGGGCCTCGGCCAGTGGCCAGGA-GGGTGTGAGGGGTGGGGGAA---------------------- i calJac3.chrUn_GL286409 C 0 I 150 s mm10.chr11 75772374 301 + 122082543 ACCACAGA-TGCTGTGAGG-------------TCTCCCCTCCC-TGGGCCTCTCTTCT-----GTCACA-TGATTATAGTTTGGAGAGTGCCTGAGATCCCATTCACTAGGGGTAAAGTGGT-----------------------------------------------------------------------------TCTTGGACAGGCACACAGCTAAGTGGCCTTCCCTTCATGTA-CCTTACCGATGAAATCATTGGATTTTCCAATGTCATAATCCCAGACAGTGACCTCCAGAGTCTTTTTGGCCAGGTCTCCATGCTTGATCTCGTAACAGAATTCCTGCTGGCCAGAAG-AGGGTGTTAAAGCCAAGGCCACTTGGCT---------------------GAGAGGTCTGTCAT------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15589403 449 - 61074082 ACCACAGGCTGCTGTGTGACCCTCCCAGACTTCTCTCCCTTTCACGGACCTATCTATTCCTCTGTCACATAGAGT-CAGGCTGGAGAAGGTCTGAGGCCCCTTGTTTCTGAGGGCAGATAGTCTGGGG--AAAGCTGGGGCCATAGAGGCCAGTAAGGAGGGGCTGTGGCTTAGATTTACGGACACTGCCCTCTATGAATTCAGAATAGGCCTGTGGCTAAACGGTATTCTCATTGTTCC-TCTTACCGATGAAATCGTTGGATTTTCCAATGTCATAATCCCAAACAGTGACTTCCAGGGTCTTCTTGGCCAGGTCCCCATGCTTAATCTCATAACAGAATTCCTGGTGGCCAGAAGAAGAGAGTCAGGAGCAATGCCATAGGGCCTCGATCTTGGCCAGTGGCCAGGAAGGCTCTGAGGTGTGGTGAGGGGATGAATGAATGGAGAGAGCA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 41673 4636 - 81552678 M e panTro4.chr17 76328 2534 + 82630442 M a score=304019.000000 s hg38.chr17_GL383563v3_alt 88353 184 + 375691 GAGGAGGGAT------GGGGGTGATCAGTGCTC-AGAGTGGATGATGGGTGG---ATGCTCACATGTCTCGCCCACTTC-CCCCTGAGCTCCACTGGGGTCTTCAGG-----gcccct-gtcccctcgcccgcttgctcct-tgtccctgagcctgctctccccacac-cccGGGAGCCTCCTGACTGCAGAGGCACTGCACG s ponAbe2.chr17_random 3474957 183 - 17838096 GAGGAGGGAC------GGGG-TGATCAGTGCTC-AGAGTGGATGATGGGTGA---ATGCTCACATGTCTCGCCCACTTC-TCCCTGAGCTCCACTGGGGTCTTCAGG-----GCCCCT-GTCCCCTCGCCCGCTTGCTCCT-TGTCCCTGAGCCTGCTCTCTCCACAC-CCCGGGAGCCTCCTGACTGCAGAGGCACTGCACG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 15332 181 + 80904711 CAGGGGGGAT------GGGG-TGATCAGTGCTC-AGGGTGGATGACGGGTGG---ACGCTCACACGTCTCGCCCACTT---CCCTGAGCTCAGCTGGGGTTTTCAGG-----GCCCCC-ATCCCCTCGCCCACTTGTTCCT-TGTCCCTGAGCCTGCTCTCCCCATAT-CCCGGGAGCCTCCTTACCGCAGAGGCACTGCCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 15247 181 + 80997621 CAGGGGGGAT------GGGG-TGATCAGTGCTC-AGGGTGGATGACGGGTGG---ACGCTCACACGTCTCGCCCACTT---CCCTGAGCTCAGCTGGGGTTTTCAGG-----GCCCCC-ATCCCCTCGCCCACTTGTTCCT-TGTCCCTGAGCCTGCTCTCCCCATAT-CCCGGGAGCCTCCTTACCGCAGAGGCACTGCCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 27602 182 + 74645514 GAggggggac-----ggggg-TGATCAGTGCTC-AGGGTGGACGACGGGTGG---ACGCTCACACATCTCGCCCACTT---CCCCGAGCTCAGCTGGGGTTTTCAGG-----GCCCCC-ATCCCCTCACCCACTTGTTCCT-TGTCCCTGAGCCTGCTCTCCCCATAT-CCTGGGAGCCTCCTTACTGCAGAGGCACTGCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 20184 159 + 75148670 GAGGGGGGAC------GGGG-TGATCAGTGCTC-AGGGTGGACGACGGGTGG---ACGCTCACATGTCTCATGCACTTC-CCCCTGAGCTCAGCTGGGGTTTTCAGG-----GTCCCC-ATCCCCTCGCCCACTTGTTCCT-TGTCCCT-------------------------GAGCCTCCTGACTGCAGAGGCACTGCCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 833785 181 - 1291538 GAGGAGGGCG------GGGG-TGGTCAGCACTC-AGGGTGGATGAGGGGTGG---ATGCCCATGTGTCTTGCCTACTTC--CCCCAAGCTCTGCTGGGGTCTCCAGG-----ACCCC--ATCCCCTCGCTCACTTGCTCCG-TGTCCCTGAGCCTGCTCTGCCCATAT-CCCGGGGGCCTCCTGACTGCAGAGGTTCTGCACG i calJac3.chrUn_GL286409 I 150 C 0 s mm10.chr11 75772675 164 + 122082543 -------------------G-TGCTCAAGCCTC-AAGGTGGTCAATGTGGGGGTCACTCTAACCAAGCT-GCCCACTTCTTCCCAAAGGGAGGCTGAG-----CAGGCCCCTGCCTCC-ACCCTCGTGCCC-----TTCTG-TCTCCCTCAAGCTGCTC---CCAGAT-GCTGCAGAGACCCTGGCTGC-GATGAACTGTCTT i mm10.chr11 C 0 I 1 s canFam3.chr9 15589852 193 - 61074082 AGGGAGGGAGAGATGAAGGG-TGGCCAGTGCTCGATGGTGGACAA-GAGTGG---ATTCTCACCCATTCCATTCACTCTGCCTGAGAGCCTGGCTGGGGTCCTCAGG-----GCCCCCTGCCCTCCAACCTACCTGCTCCTCTGTCACTGACGCTGCTCTCTCCAAATCCCCAAGAGCCTCCTTACTGCTAGATTAATATACA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 41673 4636 - 81552678 M e panTro4.chr17 76328 2534 + 82630442 M a score=1960446.000000 s hg38.chr17_GL383563v3_alt 88537 782 + 375691 CCCCACAGTCCTTGTCATCCTGGGCCTCTCTGGGGCCTGGCTTTGCTGACC------------CCTCCCTTCTCTG---------------------------TGGGACCCTCCCTTCCATCCGGGGTTCCCCTCACTCTCTGGAAGCATCTT---GACCT---------CCCCTGCCT---GCCTCTGGA---TCACTGGTGTGGTGTG-----GGCTCTACCCAAGGCCCCTCTGCT------CTTCTTTCCTT---CTTGTTC---CTTGGG--G-----GGAATCCGCATTTCCAGCCGTACTTGCCGCCTTGGGCGGAAG-------A-CTTCCTGGGG-CC------------------------------CCAGGGTGTCTCGAGTCCCCTTGCCCCACACAGAGTTTCTCCC-CATCTTCCTCACCCCCTCTTTGCC--CTGTTG---CCTCCATGAGGAACCGAGGACTCCCCTCAACA-CTTCCCTCCCCCCAGCCCTAC---ATCCGACA-----------AGTCCTGCCAAGAGCTTTCCAGGGGTCCCCCAG------------CTCC-CCTGTGT--CTGTGGCTTGGTGCGGCCCCTCCCCACC----------------------GTCTCTGACCACCCTCCCCA---TCCCGCCATGACCTTTTGAAAAC---------CCAG--CCAC-----ACCCCCA-CTGCTGTGGGGCAGAG-GAATGGCCTTCATGAAGCTTCACCAGCCCCT---CATACCTCATTAAACTCCGGGTTCAGGGTTTTTTTCTTCACCGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAGGTATCTGGAATTACATCCAACGGACAGGCAGAGGATGGGGACATGCTATGGGGTATAGATCAAGCCAGCAGGTATTCAAAGAGCTTTCTGTCCCTGGAGAGAGATTCCTGGGCCCTTCTTTTGTCCTAATC s panTro4.chr17 78862 783 + 82630442 CCCCACAGTCCTTGTCATCCTGGGCCTCTCTGGGGCCTGGCTTTGCTGACC------------CCTCCCTTCTCTG---------------------------TGGGACCCTCCCTTCCATCTGGGGTTCCCCTCACTCTCTGGAAGCATCTTCTCGACCT---------CCCCTGCCT---GCCTCTGGA---TCACTGGTGTGGCGTG-----GGCTCTACCCAAGGCCCCTCTGCT------CTTCTTTCCTT---CTTGTTC---CTTGGG--G-----GGAATCCGCATTTCCAGCCGTACTCGCCACCTTGGGCGGAAG-------A-CTTCCTGGGG-CC------------------------------CCAGGGTGTCTTGAGTCCCCCTGCCCCACACAG--TTTCTCCC-CATCTTCCTCACCCCCTCTTTGCC--CTGTTG---CCTCCATGAGGAACCCAGGACTCCCCTCAACA-CTTCCCTCCCCCCAGCCCTAC---ATCCGACA-----------AGTCCTGCCAAGAGCTTTCCAGGGGTCCCCCAG------------CTCC-CCTGTGT--CTGTGGCTTGGTGCGGCCCCTCCCCACC----------------------GTCTCTGACCACCCTCCCCA---TCCCACCATGACCTTTTGAAAAC---------CCAG--CCAC-----ACCCCCA-CTGCTGTGGGGCAGAG-GAATGGCTTTCATGAAGCTTCACCAGCCCCT---CATACCTCATTAAACTCCGGGTTCAGGGTTTTTTTCTTCACCGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAGGTATCTGGAATTACATCCAACGGACAGGCAGAGGATGGGGACATGCTATGGCGTATAGATCAAGCCAGCAGGTATTCAAAGAGCTTTCTGTCCCTGGAGAGAGATTCCTGGGCCCTTCTTTTGTCCTAATC i panTro4.chr17 M 2534 C 0 s ponAbe2.chr17_random 3475140 809 - 17838096 CCCCACAGTCCCTGTCATCCTGGGCCTCTCTGGGGCCTGGCTTTGCTGACC------------CCTCCCTTCTCTGTGGGTGCCT---CTTTCTCGCAGCTTCTGGGACCCTCCCTTCCATACGGGGTTCCCCTCACTCTCTGGAAGCATCTTCTCGACCT---------CCCCTGCCT---GCCTCTGGA---TCACTGGTGTGGCATG-----GGCTCTACCCAAGGCCCCTCTGCT------CTTCTCTCCTT---CTTGTTC---CTTGGG--G-----GGAATCCGCATTTCCAGCCGTACTTGCCGCCTTGGGCTGAAG-------ACCTTCCTGGGG-CC------------------------------CCGGGGTGTCTCAAGTCCCCTTGCCCCACAGAGAGCTTCTCCC-CATCTTCCTCCCTCCCTCTTTGCC--CTGTTG---CCGCCAAGAGGAACCCAGGACTCCCCTCAACA-CTTCCCTCCCCCCAGCCCTAC---ATCCGACA-----------AGTCCTGCCAAGAGCTTTCC-GGGGTCCCCCAG------------CTCC-CCTGTGT--CTGTGGCTTGGTGCGGCCCCTCCCCACC----------------------GTCTCTGACCACCCTCCCCA---TTCCGCCAGGACCTTTTGAAAAC---------CCAG--CCAC-----ACCCCCA-CTGCCCTGGGGCAGAG-GAGTGGCCTTCATGAAGCTTCCCCAGCCCCT---CATACCTCATTAAACTCTGGGTTCAGGGTTTTTTTCTTCACCGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAGGTATCTGGAATTACATCCAAGGGACAGGCAGAGGATGGGGACATGCTATGGGGTGTAGATCAAGCCAGCAGGTATTCGAAGAGCTTTCTGTCCCTGGAGAGAGATTCCTGGGCCCTTCTTTTGTCCTAATC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 15513 805 + 80904711 CCCCACAGTCCCTGTCGTCCTGGGCCTCTCTGGGGCCTGGCTTTGCTGACC------------CCTCCCTTCTGTG--GGTCCCT---CTTTCCCACAGCTTGTGGGACCCTCCCTTCCATCCGGGGTTCCCCTCACTCCCCAGAAGCATCTTCTCAGCCT---------CCCCTGCCC---GCCTCTGGA---CCACGGGTGTGGCGTG-----GGCTCTACCCAAGGCCCCTCCGCT------CTTCTTTCCTT---CTTGTTC---CTTGGG--G-----GGAGT-CGCGTTTCCAGCTGTACTCGCCACCTTGGGCTGAAG-------ACCTTCCTGGGG-TC------------------------------CCACGGCGACTCGAGTCCCCTCGTCCCACACAGAGCTTCTCCC-CCTCTTCCTCACCCCCTCTTTGCC--CCGTGG---CCTCCATGAGGAGCCCAGGACACCCCTCAACA-CTTCCCTCTCCCCAGCCCTAC---ATCTGACA-----------AGTCCTGCCAAGAGCTTTCCAGGGGTCCCCCAG------------CTCC-CCTGTGT--CTGTGGCTTGGTGCGGCCCCTCCCCACC----------------------TTCTCTGACCACCCTCCCCA---TCCCACCATGACCTTTTGAAAAC---------CCAG--CCAC-----ACCCCCA-CCGCCCTGGGGCAGGG-GAGTGGCCTCCGTGAAGCTTCACCAGCCCCT---CATACCTCGTTAAACTCCGGATTCAGGGTTTTTTTCTTCACCGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAGGTATCTGGAATTACAGCCAAGGGACAGGCAGAGGATGGGGACATGCTGTGGGGTATAGATCAAGCCAGCAGGGATTCGAAGAGCTTTCTGTCCCTG--GAGAGATTCCTGGACCCTTCTTTTGTCCTAATC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 15428 805 + 80997621 CCCCACAGTCCCTGTCGTCCTGGGCCTCTCTGGGGCCTGGCTTTGCTGACC------------CCTCCCTTCTGTG--GGTCCCT---CTTTCCCACAGCTTGTGGGACCCTCCCTTCCATCCGGGGTTCCCCTCACTCCCCAGAAGCATCTTCTCAGCCT---------CCCCTGCCC---GCCTCTGGA---CCACGGGTGTGGCGTG-----GGCTCTACCCAAGGCCCCTCCGCT------CTTCTTTCCTT---CTTGTTC---CTTGGG--G-----GGAGT-CACGTTTCCAGCTGTACTCGCCACCTTGGGCTGAAG-------ACCTTCCTGGGG-TC------------------------------CCACGGCGACTCGAGTCCCCTCGTCCCACACAGAGCTTCTCCC-CCTCTTCCTCACCCCCTCTTTGCC--CCGTGG---CCTCCATGAGGAGCCCAGGACACCCCTCAACA-CTTCCCTCTCCCCAGCCCTAC---ATCTGACA-----------AGTCCTGCCAAGAGCTTTCCAGGGGTCCCCCAG------------CTCC-CCTGTGT--CTGTGGCTTGGTGCGGCCCCTCCCCACC----------------------TTCTCTGACCACCCTCCCCA---TCCCACCATGACCTTTTGAAAAC---------CCAG--CCAC-----ACCCCCA-CCGCCCTGGGGCAGGG-GAGTGGCCTCCGTGAAGCTTCACCAGCCCCT---CATACCTCGTTAAACTCCGGATTCAGGGTTTTTTTCTTCACCGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAGGTATCTGGAATTACAGCCAAGGGACAGGCAGAGGATGGGGACATGCTGTGGGGTATAGATCAAGCCAGCAGGGATTCGAAGAGCTTTCTGTCCCTG--GAGAGATTCCTGGACCCTTCTTTTGTCCTAATC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 27784 804 + 74645514 CCCCACAGTCCCTGTCGTCCTGGGCCTCTCTGGGGCCTGGCTTTGCTGACC------------CCTCCCTTCTGTG--GGTCCCT---CTTTCCCACAGCTTGTGGGACCCTCCCTTTCATCCGGGGTTCCCCTCACTTCCCGGAAGCATCTTCTCGgcct---------cccctgcct---gcctctggA---CCACGGGTGTGGCGTG-----GGCTCTACCCAAGGCCCCTCcgct------cttctttcctt---tttgttc---cttGGG--G-----GGAGT-CGCATTTCCAGCTGTACTCGCCACCTTGGGCTGAAG-------ACCTTCCTGGGG--C------------------------------CCAGGGTGACTCGAGTCCCCTTGTCCCACACAGAGCTTCTCCC-CATCTTCTTCACCCCCTCTTCGCC--CCGTGG---CCTCCATGAGGAACCCAGGACACCCCTCAACa-cttccctctccccagccctac---ATCCGACA-----------AGTCCTGCCAAGAGCTTTCCAGGGGTCCCCCAG------------CTCC-CCTGTGT--CTGTGGCTTGGTGCAGCCCCTCCCCACC----------------------ATCTCTGACCACCCTCCCCA---TCCCACTATGACCTTTTGAAAAC---------CCAG--CCAC-----ACCCCCA-CCGCCCCGGGGCAGGG-GAGTGGCCCTCGTGAAGCTTCACCGGCCCCT---CATACCTCGTTAAACTCCGGGTTCAGGGtttttttCTTCACCGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAGgtatctggaattacagccaAGGGACAGGCAGAGGATGGGGACATGCTATGGGGTATAGATCAAGCCAGCAGGGATTCGAAGAGCTTTCTGTCCCTG--GAGAGATTCCTGGACCCTTCTTTTGTCCTAATC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 20343 780 + 75148670 CCCCACAGTCCCTGTCGTCCTGGGCCTCTCTGGGGCCTGGCTTTGCTGACC------------CCTCCCTTC-----------------------------TGTGGGACCCTCCCTTCCATCCGGGGTTCCCTTCACTCCCTGGAAGCATCTTCTCAACCT---------CCCCTGCCT---GCCTCTGGA---TCACTGGTGTGGCGTG-----TGCTCTACCCAAGGCCCCTCCGCT------CTTCTTTCCTT---CTTGTTC---CTTGGG--G-----GGAAT-CGTGTTTCCAGCTGTACTCGCTACTTTGGGCTGAAG-------ACCTTCCTGGGG-CC------------------------------CCAGGGTGTCTCGAGTCCCCTTGTCCCACACAGACCTTCTTCC-CATCTTCCTCACCCCCTCTTTGCC--CCGTGG---CCTCCATGAGGAACCCAGGACATCCCTCAACA-CTTCCCTCTCCCCAGCCCTAC---ATCCGGC------------ATTCCTGCCAAGAACTTTCCAGGGGTCCCCCAG------------CTCC-CCTGTGT--CTGTGGCTTGGTGCGGCCCCTCCCCACC----------------------ATCTCTGACCACCCTCCCCA---TCCCACCATGACCTTTTGACAAC---------CCAG--CCAC-----ACCCCCA-CCGCCCTGGGGCAGAG-GAGTGGCCTTCATGAAGCTTCACCAGCCCCT---CATACCTCGTTAAACTCCGGGTTCAGGGTTTTTTTCTTCACCGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAGGTATCTGGAATTACATCCAAGGGACAGGCAGAGGATGGCGACATGCTATGGGGTATAGATCAAGCCAGCAGGGATTCAAAGAGCTTTCTGTCCCTG--GAGAGATTCCTGGACCCTTCTTTTGTCCTCATC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 833966 805 - 1291538 --CCCCAGTCCCCGTCATCCTGGGCCTCCCTGGGGCCTGGCTTTGCTGACC------------TCTCCCTACTCTGTGGGTCCCT---CTCTCTCTAAGCTTCTGGGACCCTCTCTTCCACCCGGGATCCCCCTTGCTCTCTGGAAGCATTTCCTTGGC-----------CCCCTGTCT---GCCCCTGGA---TCACTGCTGTGGTGTG-----GGCTCTACCTGAGGCCCCTCTGCT------CTTCTTTCCTT---CTTGTTC---CTTGGG--G-----GGAATCCATGTTTCCAGCCATACTGACCCTCCTGGGATGAAG-------ACTGTTCTGGGGTCC------------------------------CCAGGGCACCGTGACTCCCCTTGCCCCACACAGAGCTTCCCCC-A----TCTTCAACTCCTCTTTGCC--CTGTTG---CCTTCAAGAGGAACCCAGGACTCCCCTCAACA-CTTCCCTCT-CCCAGCCCTAC---ATCCAGCA-----------AGTCCTGCCAAGAGCTTCCCAGGGGTCCCTCAG------------CTCC-CCCGTGT--CTGTGGCCTGATGTGGCCCCGCCCCACC----------------------ACCTCTGACCATCCTCCTCA---TCCCACCATAACCTTTTGAAAACCCAGCCCCTCCAG--CCAC-----ACCCCTA-CCATCTTAGGGCAGAG-GAGTGGCCTTCCTGAAGCTCTACCAG-CCCT---CATACCTCATTGAACTCCGGGTTCAGGGTTTTTTTCTTTACTGCTGTCTTATGTTTGGATTTCTTGTCCACATCTGGCCTCAAGTATCTGGAATTACATCCAAAAGACGGGCAGAGGATGGGCACAAGCTATGGGGCACAGATGAAGCCTGTGGGGATTAGAAGAGC-TTCTGTCCCTG----GAGATTCCTGGGCCCTTCTGTTGTTCTAATA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75772840 897 + 122082543 GTGAAGAGTCTTTGCCATCCT--------CTGGGG-CTGGCCTTGCTTCCCAAGCACCTGCTGTCACCTCTGCCTGTGAATCCATGGCCGTGAATCAGGCCCCAGGCGTTCTGCTCTTCTTCCAA-------CTTATTCAGTGGAAG-ACCCCCCAGGTCTGTGACCCACCCTCTGCTCTGAGGACCTGGGCACCCACTGTCCTGTTCTGCCAGTGGCCCTAGCGGGTATGCCTTCACTTcaggacttctcatcta---caagttcatgtttgag--acctgtgcaat-tgagttacaaacagaaattgcaaaattgtcccgtagtaagcttatggtattgggt-tCACTGTGTCCAGAGTCATCTTGACACGCCTGCTGGGGTGTCTTGAGTCTCCACAGCCTACCTAGCATGTCTCCT-CATTCTCTCCACATCTTTCTTCCCAACCCTGT---CATCTAGAAGGTCACTCACACGCTGCTGAACA--TCCTCTCTTTCCACCCCTACCTGATTCAATATCAACCTTCTTAGTC---CCACGAGCTTCCCTATTGCCAAGTAGACTTGGTAGAGCCTTA-CCTA-----CCATGGC-TGAGGCAACTGTTCCCTACC----------------------CTCTCTTACCG--CTTCCCAGTTCCCCACAGTACCCTTTTGAAGAC---------CAAG--CCCCTCCAGACCCCCACCCAGCCCAGGCTAGCC-CCACAGCTCTCATGAAGC-CCAGTGGAGCCTGGCCATACCTCATTGAATTCTGGGTTTAGTGTTTTCTTCTTCACTGCTGTCTTATGCTTGGATTTCTTGTCTACATCTGGCTTCAGATATCTGGAATGATAATT-GGGGACAATCAGAGGCTAGG--CGAGCTGTGAGCTGCAGATGGTGCTAGCAGAAGCT-ATGGGGCTCTA---CCCTGGAGATGCGTCCCTGGTCACCT---TTGTCCTAACC i mm10.chr11 I 1 I 536 s canFam3.chr9 15590045 723 - 61074082 -CATGGGAGCCTTGGTGTGCTTGGCGTTTCTTGAGTCTGGCTCTGCTCACC------------ACTCCCTTGTTTG------------------------------------------------------------------------------TAAGACT---------CTCTCACAG---GCTCCTGGG------ATGATATGATTTG-------------------CCCCTCTGCT------CCTCTCCACGTGCATCTGCCC---TCTGGGCTG-----AGGACCTGGGGATCTACCTGGACC----------------AG-------ATCTTCTCAAGG-CC------------------------------CTGGGGCATCTCAGATTCTCACATCCCACCCAGAGCATCCCCTGTGTCACTTGCACCTCCCCTCTGGC--TGTTGGGTCCCTCCAT-------------TCCACCTCCACATCCTACATGGCCACAGTCC--C---ATCAATTT-----------GATTCTCTGAAGAGCTTTCCAGGCTTCCCTGTC------------CTCCATCTGTACCACCTTGGCCTTGTCTCTCCCCTGCCCCCCACAGCCAGGGGCTCTCCTGGTGGCCCCTTCCCACCTCTCAGT---TTCCACAGTAGCTCTTGGAAAAC---------TCAGTCCTCC-----AGGCCCT-CTGCCCTGGGGGACAGCAAGCAGCTTCCCAGCAGCTTCGCCAGCCCCT---TGTACCTCGTTGAATTCGGGGTTCAGGGTCTTCTTCTTTACTGCTGTCTTATGTTTAGATTTCTTGTCCACATCTGGCTTCAGGTATCTGGAATTATAACCAACAAATGGGCAGAGGGTGGGGAGAAGCTATGG-GTACAAATGGAGCCAGCAGGGATTGGGAGAGCTTTTCGTTCCTAGAGAGAGATCCGTGGGCCTCCTGTCCCTACTAATC i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 41673 4636 - 81552678 M a score=21311.000000 s hg38.chr17_GL383563v3_alt 89319 11 + 375691 ATTGGATTTTC s panTro4.chr17 79645 11 + 82630442 ATTGGATTTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3475949 11 - 17838096 ATTGGATTATC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 16318 11 + 80904711 ATTGCATTTTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 16233 11 + 80997621 ATTGCATTTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 28588 11 + 74645514 ATTGCATTTTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21123 11 + 75148670 ATTGCATTTTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 834771 11 - 1291538 ATTGGATTTTC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15590768 10 - 61074082 ATAGGATACC- i canFam3.chr9 C 0 C 0 e mm10.chr11 75773737 536 + 122082543 I e nomLeu3.chr19 41673 4636 - 81552678 M a score=186415.000000 s hg38.chr17_GL383563v3_alt 89330 58 + 375691 CCAACGCTATTTTGTGGCAAA-------GGCGAGACGTTGTTTTCGAGAAGCAAGTG-GTCCCTTC s panTro4.chr17 79656 58 + 82630442 CCAACGCTATTTTGTGGCAAA-------GGCGAGACGTTGTTTTCGAGAAGCAAGTG-GTCCCTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3475960 58 - 17838096 CCAACGCTATTTTGGGGCAAA-------GGCGAGACGTTGTTTCCGAGAAGCAAGTG-GCCCCTTC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 46312 59 - 81552678 CCAACGCTATTTTGTGGCAAA-------GGTGAGATGTTGTTTTCGAGAAGCAAGTGTGTCCCTTC i nomLeu3.chr19 M 4636 C 0 s rheMac3.chr16 16329 58 + 80904711 CCAACGCTATTTTGTGGCAAA-------GGCGAGACATTGTTTTTGAGAAGCAAGTG-GTCCCTTC i rheMac3.chr16 C 0 I 384 s macFas5.chr16 16244 58 + 80997621 CCAACGCTATTTTGTGGCAAA-------GGCGAGACATTGTTTTCGAGAAGCAAGTG-GTCCCTTC i macFas5.chr16 C 0 I 232 s papAnu2.chr16 28599 58 + 74645514 CCAACGCTATTCTGTGGCAAA-------GGCGAGACATTGTTTTCGAGAAGCAAGTG-GTCCCTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21134 58 + 75148670 CCAACTCTATTTTGTGGCAAA-------GGCGAGACATTGTTTTCGAGAAGCAAGTG-GTCCCTTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 834782 58 - 1291538 CCAACACTATTTTGTGACAAA-------GGTGAGACATTGTTTTCGGGAACCAAGCA-GTCCCTTA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15590778 63 - 61074082 CCAGCACTGCCCTGTGGCAAACATTAGTGGCCAGCTGCAGTGG--AAGGAGCAAGTG-GTTCCTTT i canFam3.chr9 C 0 C 0 e mm10.chr11 75773737 536 + 122082543 I a score=98400.000000 s hg38.chr17_GL383563v3_alt 89388 31 + 375691 ATCCACCGCACTTCTGTTCACACACACATTC s panTro4.chr17 79714 31 + 82630442 ATCCACCGCACTTCTGTTCACACACACATTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476018 31 - 17838096 ATCCACCGCACTTCTGCTCACACGCACATTC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 46371 31 - 81552678 ATCCACTGCACTTCTGTTCACACACACATTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 16771 31 + 80904711 ATCCACCGCACTTCTGTTCACACACACATTC i rheMac3.chr16 I 384 C 0 s macFas5.chr16 16534 31 + 80997621 ATCCACCGCACTTCTGTTCACACACACATTC i macFas5.chr16 I 232 C 0 s papAnu2.chr16 28657 31 + 74645514 ATCCACCGCCCTTCTGTTCACGCACACGCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21192 31 + 75148670 CTCCACCGCACTTCTGTTCACACACACCTTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 834840 31 - 1291538 ATCCGCCTCACTTCTGTTCACACACACATTC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15590841 31 - 61074082 GTCACTTAGACTTTTCTCCACATGCCctttc i canFam3.chr9 C 0 I 368 e mm10.chr11 75773737 536 + 122082543 I a score=397917.000000 s hg38.chr17_GL383563v3_alt 89419 151 + 375691 CTGAAGTTAACCCTGGG----------------------------------------------------------------GGGCGCCCTCCATCCCCCTAGGAAAGGGGTTTTTCCTCATTTCTGGAAGTCTAATTTTCATAAAGCTCACATTTCCCACCAGAACAGAGTTTTTAGCAGAGTTGGTCTCTTGTTCAAACTTC-----------------TTTTTTTTTTTC s panTro4.chr17 79745 155 + 82630442 CTGAAGTTAACCCTGGG----------------------------------------------------------------GGGCGCCCTCCATCCCCCTAGGAAAGGGGTTTTTCCTCATTTCTGGAAGTCTAATTTTCATAAAGCTCACATTTCCCACCAGAACAGAGTTTTTAGCAGAGTTGGTCTCTTGTTCAAACTTCT-------------TTTTTTTTTTTTTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476049 153 - 17838096 CTGAAGTTAACCCTGGG----------------------------------------------------------------GGGCGCCCTCCCTCCCCCTAGGAAAGGCGTTTTTCCTCATTTCTGGAAGTCTAATTTTCATAAGGCTCATGTTTCCCACCAGAACAGAGTTTTTAGCAGAGTTGGTCTCTTGTTCAAACTTT---------------TCTTTTTTTTTTTG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 46402 134 - 81552678 CTGAAGTTAGCCCTGGG----------------------------------------------------------------GGACGCCCTCCATCCCCCTAGGAAAGGGGTTTTTCCTCGTTTCTGGAAGTCTAAT----------------TTTCCCATCAGAACAGAGTTTTTAGCAGAGTTGGTCTCTTGTTCAAACTTT------------------TTTTTTTTTTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 16802 147 + 80904711 CTGAAGTGAACCATGGT----------------------------------------------------------------GAGGGCCTTCCATCCCCCTAGGGAAGGGATTTTTCCTCGTTTCTGGAAGCCTAATTTTCATCAGGCTCACGTTTCCCACCAGAACAGAGCTTTTAGCAGAGTTGGTCTCTTGTTCAAAG---------------------TTTTTTTTTTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 16565 147 + 80997621 CTGAAGTGAACCATGGT----------------------------------------------------------------GAGGGCCTTCCATCCCCCTAGGGAAGGGATTTTTCCTCGTTTCTGGAAGCCTAATTTTCATCAGGCTCACGTTTCCCACCAGAACAGAGCTTTTAGCAGAGTTGGTCTCTTGTTCAAAG---------------------TTTTTTTTTTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 28688 151 + 74645514 CTGAAGTGAACCATGGT---------------------------------------------------------------gggggggCCTCCATTCCCCTAGGGAAGGGATTTTTCCTCGTTTCTGGAAGCCTAATTTTCATCAGGCTCACATTTCCCACCAGAACAGAGCTTTTAGCAGAGTTGGTCTCTtgttcaaagttt------------------ttttttttttg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21223 212 + 75148670 CTGAAGTGAACCATGGTGGGGGGGGTCCCTTTCTCCACCGCACTTCTGTTCACACGCACGTTCCTGAAGTGAACCATGGTGGGGGGCCCTCCATCCCCCTAGGGAAGGGATTTTTCCTCGTTTCTGGAAGCCTAATTTTCATCAGGCTCACATTTCCCACCAGAACAGAGCTTTTAGCAGAGTTGGTCTCTTGTTCAAAC--T------------------TTCTTTTTTTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 834871 165 - 1291538 CTGAAGTTAACCATGGC----------------------------------------------------------------AGGC-CCCTCCATCCACCTGGGAAGGGG--TTTTCCTCATTTCTGGAAGTCTCATTTTCACAAGGCTCATGCTTCCCACCAGACTAGAGTTTTTAGCAGAGTTGGTCTCACATTCGAGCTtttctttctttctttctttctttcttttttG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15591240 137 - 61074082 CTGAAGTTAATCACAGA--------------------------------------------------------------------GTCCCCTTTTCCCCT-----TGAGGTTTTTCTTTGCTTCTGGAAGTTTAATTTTCATAAAGCTTACGTTTCCCACCAGAAAAACATTTTTAGCAGAGTTGGTC---CGTTAGAGATTT------------------TCCCtttttt- i canFam3.chr9 I 368 C 0 e mm10.chr11 75773737 536 + 122082543 I a score=70725.000000 s hg38.chr17_GL383563v3_alt 89570 28 + 375691 A------------------------------------GATggctgactgcaacctctgcctccc s panTro4.chr17 79900 28 + 82630442 A------------------------------------GATggctgactgcaacctccgcctccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476202 28 - 17838096 A------------------------------------GATggctcactgcaacctctgcctccc i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 46536 28 - 81552678 A------------------------------------GATggctcactgcaacctccgcctccc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 16949 28 + 80904711 A------------------------------------GAcggctcactgcaacctccacctccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 16712 28 + 80997621 A------------------------------------GATggctcactgcaacctccaccaccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 28839 28 + 74645514 a------------------------------------gacggctcactgcaacctccacctccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21435 28 + 75148670 A------------------------------------GAcggctcactgcaacctccacctccc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 835036 64 - 1291538 Gtcgctctgtagccagacctggagtggatggcacaatgtcggctcactgcaacctctgcctccc i calJac3.chrUn_GL286409 C 0 I 313 e mm10.chr11 75773737 536 + 122082543 I e canFam3.chr9 15591377 0 - 61074082 C a score=261673.000000 s hg38.chr17_GL383563v3_alt 89598 97 + 375691 gggttcaagtgattctcctgc------------------ctcagcctccagagtagctgggactacaggcatgtgccgccatgcgcaggtaatttttgtattttcagtagagaca s panTro4.chr17 79928 97 + 82630442 gggttcaagtgattctcctgc------------------ctcagcctccagagtagctgggactacaggcatatgccgccatgcgcaggtaatttttgtattttcagtagagacg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476230 97 - 17838096 aggttcaagcgattctcctgc------------------ctcagccgcccaagtagctgggattacaggcacctgccaccacgcccggctaatttttgtatttttagtagagatg i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 46564 97 - 81552678 gggttcaagcgattctcctgc------------------ctcagcctccagagtagctgggactacaggcacctgccaccatgcgcagctgatttttgtatttttagtagagaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 16977 97 + 80904711 ggattcaagcgattctcctgc------------------ctcagcctctggagtagctgggatttcagtcgcccgccaccatgcgcagctaatttttgtatttttagtagagacg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 16740 97 + 80997621 ggattcaagcgattctcctgc------------------ctcagcctctggagtagctgggatttcaggcacccgccaccatgcgcagctaatttttgtatttttagtagagacg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 28867 97 + 74645514 agattcaagcgattctcctgc------------------ctcagcctctggagtagctgggatttcaggcacccgccacctcgcccggctaatttttttatttttagtagagaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21463 115 + 75148670 ggattcaagcaattctcctgcttgaatccagaggctactcccagcctctggagtagctgggatttcaggcacccgccaccatgcgcagctaatttttgtatttttagtagagacg i chlSab2.chr16 C 0 I 295 s calJac3.chrUn_GL286409 835413 97 - 1291538 gggttcaaacgattctcctgc------------------ctcagcctcccaagtagctgggattacaggtgcctgccaccatgcccagctaatttttacatttttagtagagctg i calJac3.chrUn_GL286409 I 313 C 0 e mm10.chr11 75773737 536 + 122082543 I e canFam3.chr9 15591377 0 - 61074082 C a score=35956.000000 s hg38.chr17_GL383563v3_alt 89695 11 + 375691 gggtttcacca s panTro4.chr17 80025 11 + 82630442 gggtttcacca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476327 11 - 17838096 gggtttcacca i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 46661 11 - 81552678 gggtttcacca i nomLeu3.chr19 C 0 I 305 s rheMac3.chr16 17074 11 + 80904711 gggtttcacca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 16837 11 + 80997621 gggtttcacca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 28964 11 + 74645514 gggtttcacca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21873 11 + 75148670 gggtttcacca i chlSab2.chr16 I 295 C 0 s calJac3.chrUn_GL286409 835510 11 - 1291538 gggtttcactg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75773737 536 + 122082543 I e canFam3.chr9 15591377 0 - 61074082 C a score=341572.000000 s hg38.chr17_GL383563v3_alt 89706 115 + 375691 tgttggccaggctggtctctagctcctgacctcaggtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacccccggccTCAAGCTTCTtttata s panTro4.chr17 80036 115 + 82630442 tgttggccaggctggtctctagctcctgacctcaggtgatccacctgcctcagcctcccgaagtgctgggattacaggtgtgagccaccacccccggccTCAAGCTTCTtttata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476338 115 - 17838096 tgtttgccaggctggtctcgagctcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccatcacccccggccTCAAGCTTCTtttata i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 46977 115 - 81552678 tgttggccaggctggtctcaagctcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacccccggccCCAAGTTTCTtttata i nomLeu3.chr19 I 305 C 0 s rheMac3.chr16 17085 115 + 80904711 tgttggccaggctggtcccgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcccagccTCAAGCTTCTtttata i rheMac3.chr16 C 0 C 0 s macFas5.chr16 16848 115 + 80997621 tgttggccaggctggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccaccacgcccagccTCAAGCTTCTtttata i macFas5.chr16 C 0 C 0 s papAnu2.chr16 28975 115 + 74645514 tgttggccagtatggtctcgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgcccggactcaagcttcttttata i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21884 115 + 75148670 tgttggccaggctggtctcaagctcctgacctcaggtgatccgcccgcctcagcctcccaaagcgctgggattacaggcaccagccaccacgcccagccTCAAGCTTCTtttata i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 835521 112 - 1291538 tgttggtcaggctggtcttgaactcctgacctcaggtgat---cccaccctggcctcccaaagtgctgggattacaggcatgagctaccatgccaggccTCAAGCTTCTAttata i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75773737 536 + 122082543 I e canFam3.chr9 15591377 0 - 61074082 C a score=1135398.000000 s hg38.chr17_GL383563v3_alt 89821 376 + 375691 aaatagcagatttattgagatataattcacataccat---------------aaaatccatccttctgaagtgtaaaac--gcagta------------------gcct---------------ttagtagactcccagagttgtacatccatcaccactacctCCATTGGAGCTTTGAGGAAG----GACAAGACCTTTTGTGCAGTCACACGGAGGCC--ACCTAGATGTTCTTCCCTCCACAGCCACTAAGGCCTTAGGCTCTGATGCAGAACAGCTGTCTTCCTctgaggctcagagagggggagtgacttgcccaaggtcacacagcctgcaagcacaagcgtggtgcttgaaagccaggctcagactccTTTCTCTATGACAGGGAGGTCATGTGCAGGCTGGAGAAGGGGACAAGAGGTCCCCAA s panTro4.chr17 80151 376 + 82630442 aaatagcagatttattgagatataattcacacaccat---------------aaaatccatccttctgaagcgtaaaac--gcagta------------------gcct---------------ttagtagactcccagagttgtacaaccgtcaccactacctCCATTGGAGCTTTGAGGAAG----GACAAGACCTTTTGTGCAGTCACAGGGAGGCC--ACCTAGATGTTCTTCCCTCCACAGCCACTAAGGCCTTAGACTCTGATGCAGAACAGCTGTCTTCCTctgaggctcagagagggggagtgacttgcccaaggtcaaacagcccgcaagcacaagcgtggtgcttgaaagccaggctcagactccTTTCTCTATGACAGGGAGGTCATGTGCAGGCTGGAGGAGGGGACAAGAGGTCCCCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476453 376 - 17838096 aaatagcagatttactgagatataattcacataccat---------------aaaatccatccttctgaagtgtaaaac--gcagta------------------acct---------------ttagtagactcccagagttgtacaaccatcaccactacctCCATTGGAGCTTTGAGGAAG----GACAAGACCTTTTGTGCAGTAACAGGGAGGCC--ACCTAGATGTTCTTCCCTCCACAGCCACTAAGGCCTTAGACTTTGATGCAGAACAGCTGTCTTCCTctgaggctcagagaggtgcagtgacttgcccaaagtcacacagccggcaagcacaagtgtggtgcttggaagccatgctcaggctccTTTCTCTATGACAGAGAAGTCATGTGCAGGCTGGAGAAAGGGACAAGAGGTCCCCAA i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47092 376 - 81552678 aaatagcagatttattgagatataattcacataccat---------------aaaatccatccgtctgaagtgtaaaac--acagga------------------gcct---------------ttagtagactcccagagttgtgcaaccatcaccactgcctCCATTGGAGCTTTGAGGAAG----GACAAGACCTTTTCTGCAGTAACAGGGAGGCC--ACCTAGATGTTCTTCCCTCCACAGCCACTAAGGCCTTAGACTTTGATGCAGAACAGCTGTCTTCCTctgaggctcagagaggtggagtgacttggccaaggtcacacagccggcaagcacaagcgtggtgcttggaagccaggctcaggctccTTTCTCTATGACAGGGAGGTCATGTGAAGGCTGGAGAAGGGGACAAGAGGTCCCCAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17200 374 + 80904711 aaatagcagattcgttgagatataattcacataccat---------------aaaatcaatctttctgaagtataaaat--gcagta------------------gcct---------------taggtagacttgcagagttgtacaaccatcaccactacct-CGCTGGAGCTCTGAGGAAG----GACAAGACCTTTCGTGCAGTAACA-GGAGGCC--ACACAGATGTTCTTCCCTCCACAGCCATTCAGGCCTTAGACGCTGATGCAGAACAGCTGTCTCCCTctgaggcccagagaggtggagtgacttgcccaaggtcacacagccggcaagcacaagcgtggtgcttggaagccaggctcaggcttcTTTCTGTGTGACAGGGAGGTCATGTGCAGGCTGGAGAAGGGGACAAGAGGTCCTCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 16963 374 + 80997621 aaatagcagattcgttgagatataattcacataccat---------------aaaatcaatctttctgaagtataaaat--gcagta------------------gcct---------------ttagtagacttgcagagttgtacaaccatcaccactacct-CGCTGGAGCTCTGAGGAAG----GACAAGACCTTTTGTGCAGTAACA-GGAGGCC--ACACAGATGTTCTTCCCTCCACAGCCATTCAGGCCTTAGACGCTGATGCAGAACAGCTGTCTCCCTctgaggcccagagaggtggagtgacttgcccaaggtcacacagccggcaagcacaagcgtggtgcttggaagccaggctcaggcttcTTTCTGTGTGACAGGGAGGTCATGTGCAGGCTGGAGAAGGGGACAAGAGGTCCTCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 29090 372 + 74645514 aaat---agatttgttgagatataattcacataccat---------------aaaatcaaTCTTTCTGAAGTATAAAAC--GCAGTA------------------GCCT---------------TTAGTAGACTTGCAGAGTTGTACAACCGTCACCACTACCT-CGTTGGAGCTCTGAGGAAG----GACAAGACCTTTTGTGCAGTAACAGGGAGGCC--ACACAGATGTTCTTCCCTCCACAGCCATTCAGGCCTTAGACTCTGATGCAGAACAGCTGTCTtcctctgaggcccagagaggtggagtgacttgcccaaggtcacacagccggCAAGCACAAGCGTGGTGCTTGGAAGCCAGGCTCAGGCTTCTTTCTGTATGACAGGGAGGTCATGTGCAGGCTGGAGAAGGGGACAAGAGGTCCTCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 21999 374 + 75148670 aaatagcagatttgttgtgatataattcacataccat---------------aaaatcaatctttctgaagtataaaac--gtggta------------------gcct---------------ttagtagacttgcagagttgtacaaccgtcaccactacct-TGTTGGAGCTCTGAGGAAG----GACAAGACCTTTTGTGCAGTAACA-GGAGGCC--ACACAGATGTTCTTCCCTCCACAGCCATTCAGGGGTTAGACCTTGATGCAGAACAGCTGTCTCCCTctgaggcccagagaggtggagcgacttgcccaaggtcacacagccggcaagcacaagcgtggtgcttggaagccaggctcaggcttcTTTCTGTATGACAGGGAGGTCATGTGCAGGCTGGAGAAGGGGACAAGAGGTCCTCAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 835633 362 - 1291538 aaatagcagatttattgagttatatttcacataccataaaaa---------aaaaatccatccttctgaagtataaaat--gcagtt------------------gcct---------------tcagtatactcccagagttgtacaaccatcaacactacct-CACTGGACTTTTGAGGAAG----GAGAAGACCTTTTGTAGAGTAACAGGGAGGCC--AGCTAGACGGTCTTGTCTCCATAAGCATTAAGGCCTTAGACTTTGATGCAGAACAGCTGTCTTCCTctgaggctcagaaaggtggagtgacttgcccaaggtcacacagccggcaagtccaggggtggt-------------------actCCTTTCTCTATGACAGTGAAGTCATGTGCAGGCTGGAGAAGGGGACAAGAGGTCCCCAA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15591377 367 - 61074082 aaatagcagatttattgagatatgattcacatacgatgaaaatcatcttCCAAAAAATAATCTTCCTAAAGTATATGACTTATAGTACGTAATTATATAAATACTGCCTATAGTATATAACGTATTAGTATATTCCTACAGTTATATGACCATTGCCTCTACTT-CAATGACTCTTTGAGGAAGTTACAACAGTGCCTCCTGT--AGGGAGAGGGAAGCCTGGCCTGTGAGCCAGCTCTTCTATAGGTATTAGTTCCTTAGACTTTGATGCCCAAGAGCTGCTTTCATC--aggctcagagagatagaaggacttgcccaaggtcacacagcttctcagcacagggctagtactcagaagcca--------------------TAACAGGAG---------------------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75773737 536 + 122082543 I a score=332250.000000 s hg38.chr17_GL383563v3_alt 90197 122 + 375691 CTTCTTTGCAAAGCTTCTCACCCTGTTCCTGCATAGATAATTGCATGACAATTGCCTTGTCCCTGCTG----AATGTGCTCTGGGG------------TCTCTGGGGTCTCACCCACGACC-AACTCCCT-------------GGGCCTGGC-- s panTro4.chr17 80527 122 + 82630442 CTTCTTTGCAAAGCTTCTCACCCTGTTCCTGCATAGATAATTGCATGACAATTGCCTTGTCCCTGCTG----AATGTGCTCTGGGG------------TCTCTGGGGTCTCACCCACGACC-AACTCCCT-------------GGGCCTGGC-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476829 121 - 17838096 CTTCTTTGCAAAGCTTCTCACCCTGTTCCTGCACAGATAATTGCATGACAATTGCCTTGTCCCTGCTG----AATGTGCTCT-GGG------------TCTCTGGGGTCTCACCTACTACC-AACTCCCT-------------GGGCCTGGC-- i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47468 109 - 81552678 CTTCTTTGCAAAGCTTCTCACCCTGTTCCTGCATAGATAATTGCATGGCAATTG-CTTGTCCCTGCTG----AATGTGCTCTGGGG------------TCT------------CCACTACC-GACTCCCT-------------GGGCCTGGC-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17574 110 + 80904711 CTTCTTTGCAAAACTCC---CCCTCTTCCCGCATGGATAATTGCATGACAACTGCCTTGTCCGTGCTG----AGCGTGCTCTGCGG------------TCT---------CGCCCACTACC-AACTCCTT-------------GCGCCTGGC-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 17337 110 + 80997621 CTTCTTTGCAAAACTCC---CCCTCTTCCCGCATGGATAATTGCATGACAACTGCCTTGTCCGTGCTG----AGCGTGCTCTGCGG------------TCT---------CGCCCACTACC-AACTCCTT-------------GCGCCTGGC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 29462 110 + 74645514 CTTCTTTGCAAAACTCT---CCCTCTTCCTGCATGGATAACTGCATGACAACTGCCTTGTCCGTGCTG----AGCGTGCTCTGCGG------------TCT---------CGCCCACTACC-AACTCCTT-------------GCGCCTGGC-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 22373 110 + 75148670 CTTCTTTGCAAAACTCC---CCCTCTTCCCGCACGGATAATCGCATGACAACTGTCTTGTCCCTGCTG----AGCGTGCCTTGTGG------------TCT---------CGCCCACTACC-AACTCCTT-------------GCGCCTGGC-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 835995 115 - 1291538 CTTCTTTGCAAAACTTCTCACCCTGTCTCTGCATGGATAATTGCATGACAATTGACCTGCCCCCACTA----GGTGTGCTCTGGGG------------CCTCTGGAGTCTCACCCACTACC--------T-------------GGGCCTGGC-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75774273 118 + 122082543 CTCTTGTGCAGAACCTCCCACCCTGTCCCTGCCCAGACAATTGTGTGACAAATGCCTTGTTTCTGTTGGGTTAACATGCCCAAAGG------------TTT-------ATTGACCAGAGCCAAACTTCTT---------------GCCTGGT-- i mm10.chr11 I 536 I 213 s canFam3.chr9 15591744 140 - 61074082 TTCCTTTGCAGAACTTCTTACCCTGTTCCTGTATAGACACTTGCGCAGTAATTGTACTGCCTCTGctg----agggtgctttgggggtgggaactacatct---------atctcaccacc-agcttcctagcaccctatttgggacccagtac i canFam3.chr9 C 0 C 0 a score=117877.000000 s hg38.chr17_GL383563v3_alt 90319 94 + 375691 ACCAGGGAGCTTAACAAACATCTGTCCAGCGAATACCTGCATCCCTAGAAGTGAAGCCACC-GCCCAAAGACACGCCCATGTCCAGCTTAACCTG s panTro4.chr17 80649 94 + 82630442 ACCAGGGAGCTTAACAAACATCTGTCCAGCGAATACCTGCATCCCTAGAAGTGAAGGCACC-GCCCAAAGACACGCCCATGTCCAGCTTAACCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3476950 39 - 17838096 ACCAGGGAGCTTAACAAACATCTGTCCAACGAAT--------------------------------------------------------ACCTG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47577 39 - 81552678 ACCAGGGAGCTTAACAAACATCTGTCCAACGAAT--------------------------------------------------------ACCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17684 39 + 80904711 ACTGGGGGGCTGAACAAACATCTGTCCAACGAATACCTG-------------------------------------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 17447 94 + 80997621 ACTGGGGGGCTGAACAAACATCTGTCCAACGAATACCTGAATCCCTAGAAGTGAAGGCACC-ACCCAAAGGCACGCCCATGTCTGGCTTATTTTG i macFas5.chr16 C 0 T 55 s papAnu2.chr16 29572 94 + 74645514 ACTGGGGGGCTGAACAAACACCTGTCCAACGAATACCTGAATCCGTAGAAGTGAAGGCACC-GCCCAAAGGCACGcccatgtctggcttcttttg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 22483 56 + 75148670 ACTGGGGGGCTGAACAAACATCTGTCCAACGAATACCTGAATCCCTAGAAGTGAAG--------------------------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 836110 91 - 1291538 ATCGGGGAGCTCAACAAACATCTGTCCAGTGAATATCTGAATCCTTAGAAGTGAAGGCGCCTGCCCAAAGGCATACCTGTGTCCAGCTTAT---- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15591884 93 - 61074082 actgggtaggtcagcaaacatctgttgaatgaatgaCtgaattcccagaagtaaaattacccacccaaaggcacacatgtatcaaacttcttg-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75774391 213 + 122082543 I a score=70135.000000 s hg38.chr17_GL383563v3_alt 90413 54 + 375691 CATCCCTAGAAGTGAAGGCACCGCCCAAAGACACGCCCATGTCCAGCTTATTCT s panTro4.chr17 80743 54 + 82630442 CATCCCTAGAAGTGAAGGCACCACCCAAAGACACGCCCATGTCCAGCTTATTCT i panTro4.chr17 C 0 I 294 s ponAbe2.chr17_random 3476989 54 - 17838096 CATCCCTAGAAGTGAAGGCACCGCCCAAAGGCACACCCATGTCCAGCTTATTCT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47616 54 - 81552678 CATCCCTAGAAGTGAAGGCACCGCCCAAAGGCACGCCCATGTCCAGCTTATTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17723 54 + 80904711 AATCCCTAGAAGTGAAGGCACCACCCAAAGGCACGCCCATGTCTGGCTTATTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 17486 54 + 80997621 AATCCCTAGAAGTGAAGGCACCACCCAAAGGCACGCCCATGTCTGGCTTATTTT i macFas5.chr16 T 55 C 0 s chlSab2.chr16 22539 37 + 75148670 -----------------GCACCACCCAAAGAAACGCCCATGTCTGGCTTATTTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 836201 8 - 1291538 ----------------------------------------------CTTGTTTT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15591977 9 - 61074082 ---------------------------------------------cttcattat i canFam3.chr9 C 0 C 0 e mm10.chr11 75774391 213 + 122082543 I e papAnu2.chr16 29666 0 + 74645514 C a score=3600.000000 s hg38.chr17_GL383563v3_alt 90467 1 + 375691 G s panTro4.chr17 81091 1 + 82630442 G i panTro4.chr17 I 294 C 0 s ponAbe2.chr17_random 3477043 1 - 17838096 G i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47670 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17777 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 17540 1 + 80997621 G i macFas5.chr16 C 0 C 0 s chlSab2.chr16 22576 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 836209 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 I 1 s canFam3.chr9 15591986 1 - 61074082 g i canFam3.chr9 C 0 C 0 e mm10.chr11 75774391 213 + 122082543 I e papAnu2.chr16 29666 0 + 74645514 C a score=1500.000000 s hg38.chr17_GL383563v3_alt 90468 1 + 375691 C s panTro4.chr17 81092 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3477044 1 - 17838096 C i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47671 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 22577 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15591987 1 - 61074082 c i canFam3.chr9 C 0 C 0 e mm10.chr11 75774391 213 + 122082543 I e calJac3.chrUn_GL286409 836210 1 - 1291538 I e papAnu2.chr16 29666 0 + 74645514 C e rheMac3.chr16 17778 0 + 80904711 C e macFas5.chr16 17541 0 + 80997621 C a score=233953.000000 s hg38.chr17_GL383563v3_alt 90469 75 + 375691 CCAGTTCCTCTCCAGAAAGGCTGCATGGTTGACACACAGTAGcctgcgacaaagctgaatgctatcatttaaaaa s panTro4.chr17 81093 74 + 82630442 CCAGTTCCTCTCCAGAAAGGCTGCATGGTCGACACACAGT-Gcctgcgacaaagctgaatgctatcatttaaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3477045 74 - 17838096 CCAGTTCCTCTCCAGAAAGGCTGCATGATTGACACACAGT-GCCTACGACAAAGCTGAATGCTATCATTTAAAAa i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47672 74 - 81552678 CCAGTTCCTCTCCAGAAAGCCTGCCTGGTTGACACACAGT-GCCTGCGACGAAGCTGAATGCTATCATTTAAAAa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17778 74 + 80904711 CCAGTTCCTCTCCAGGAAGGCTACACGGTTGACACACAGT-GCCTGTGACAAAGCTGAATGCTATCACTTAAAaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 17541 74 + 80997621 CCAGTTCCTCTCCAGGAAGGCTACACGGTTGACACACAGT-GCCTGTGAcaaagctgaatgctatcacttaaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 29666 74 + 74645514 ccaGTTCCTCTCCAGGAAGGCTGCACGGTTGACACACAGT-GCCTGTGACAAAGCTGAATGCTATCACTTAAAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 22578 73 + 75148670 -CAGTTCCTCTCCAGGAAGGCTGCACGGTTGACCCACAGT-GCCTGTGAcaaagctgaatgctatcacttaaaaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 836211 74 - 1291538 CCAACTGCTCTCCAGAAAGGCTGCATGGTTGACACACAGc-accctcaacaaagctggatgctatcacttacaaa i calJac3.chrUn_GL286409 I 1 C 0 s canFam3.chr9 15591988 73 - 61074082 caaactatcctctgaaaaggccatatagatgatgcacagt-accctcagcaaagctgagtatcgttgccttaaa- i canFam3.chr9 C 0 C 0 e mm10.chr11 75774391 213 + 122082543 I a score=59622.000000 s hg38.chr17_GL383563v3_alt 90544 15 + 375691 ctccttgctggtttg s panTro4.chr17 81167 15 + 82630442 ctccttgctggtttg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3477119 15 - 17838096 atccttgctggtttg i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47746 15 - 81552678 atccttgctggtttg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17852 15 + 80904711 atccttgctggtttg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 17615 15 + 80997621 atccttgctggtttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 29740 15 + 74645514 ATCCTTGCTGGTTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 22651 15 + 75148670 atccttgccggtttg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 836285 15 - 1291538 atccttgctggtttg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75774604 13 + 122082543 CTCctaggtggtt-- i mm10.chr11 I 213 C 0 s canFam3.chr9 15592061 14 - 61074082 -tccttgctgaTTTg i canFam3.chr9 C 0 I 10599 a score=1700119.000000 s hg38.chr17_GL383563v3_alt 90559 626 + 375691 agaggcagaaaatgatatctcatagtt---gctttactttgcatat-tttAAAATT------GTGAC-------TTTCA-------------TGGCATAAATAATACTGGTTTATTACAG-AAGCACTAGAAAATGCATGTGGACAAAAGTTGG-GATTAGGAGagagaaatgaagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcattgcagctttctaccatcaccaaaaattgcaaacaaccacacgcccttcaactggggaactcatcaacaacaaacttgtggtttacccacacaatggaagaccacttagcaacaaaaaggaccaaactcctgg-------------------------------------tacatgcaactgacagatgaatctca---aacgcattcctccgtgtgaaagaagccggactcacagggc------aacacactatct---gactg-tttcatgggaaagtctggaaacggcaacaccattgagacagaaaacaggtgagtggttgcctggggccagggaactttctgg---ggtcatattctctatgttgattctggtggtggAAACAAGACTGTCccagcctgggtgatacagcgagaccccatctctaccaaaaaattaaaaattagctgggcatggtggtgcatgcctgtagtcccagctattcacagtgctgaggtgggaagat s panTro4.chr17 81182 626 + 82630442 agaggcagaaaatgatatctcataatt---gctttactttgcatat-tttAAAATT------GTGAC-------TTTCA-------------TGGCATAGATAATACTGGTTTATTACAG-AAGCACTAGAAAATGCATGTGGACAAAAGTTGG-GATTAGGAGagagaaatgaagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcattgcagctttctaccatcaccaaaaattgcaaacaaccacacgcccttcgactggggaactcatcaacaacaaacttgtggtttacccacacaatgcaagaccacttagcaacaaaaaggaccaaactcctgg-------------------------------------tacatgcaactgacagatgaatctca---aacacattcctccctgtgaaagaagccggactcacagggc------aacacactatct---gactg-tttcatgggaaagtctggaaacggcaacactattgagacagaaaacaggtgagtggttgcctggggccagggaactttctgg---ggtcatattctctatgatgattctggtggtggaaacaagactgtaccagcctgggtgatacagcgagaccccatctctaccaaaaaattaaaaattagctgggcatggtggtgcatgcctgtagtcccagctattcacagtgctgaggtgggaagat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3477134 626 - 17838096 aaaggccaaaaatgatatctcatagtt---gctttactttgcatat-ttTAAAATT------GTGAC-------TTTCA-------------TGGCATAAATATTACTGGTTAATTACAG-AAGCACTAGAAAATGCATATGAACAAAAGTTGG-GATTAGGAGagagaaatgaagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcattgcagatttctaccatcaccaaaaattgcaaacaaccacacgcccttcaactggggaactcatcaacaacaaacttgtggtttacccacacaatggaagaccacttagcaacaaaaaggaccaaactcctgg-------------------------------------tacatgcaactgacagatgaatttca---aacgcattcctctgtgtgaaagaagccggactcacagggc------aacacactatct---gaccg-tttcatgggaaagtctggaaacggcaacactattgggacagaaaacaggtgagtggttgcctggggctggggAAATTTCTGG---GCTCATATTCTCTATGTTGATTGTGGTGGTGGAAACAAGACTGTaccagcctgggtgatacggcaagtccctatctctaccaaaaaattaaaaattagctgggcatggtggtgcatgactgtagtcacagctattcacagtgctgaggtgggaagat i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 47761 605 - 81552678 agaggcagaaaatgatatctcacagtt---gctttactttgcatGT-TTTAAAATT------GTGAC-------TTTCA-------------TGGCATAAATAATACTGGTTTATTACAG-AAGCACTAGAAAATGCATGAGGACAAAAGTTGC-GATTAGGAGagagaaatgaagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcattgcagctttctaccatcaccaaaaattgcaaacaactacacgccct----------------tcagcaacaaacttgtggtttacccacacaatggaagaccacttcgcaacaaaaaggactgaactcctgg-------------------------------------tacatgcaactgacagatgaatctca---aacgcactcctctgtgtgaaagaagccggactcacagggc------aacacgctatct---gactg-tttcatgggaaagtctggaaacggcaacactgttgggacagaaaacaggtgagtggttgcctggggctggggAACTTTCGGG---GGTCACATTCTCTGTGTTGACT---GTGGTGGAAACAAGACTGTaccagcttgggcgatacagcgagaccccacctctaccaaaaaaTTACAAACTAgctgggcat-gtggtgcatgcctgta-tcccagctgttcacaaggctcaggtgggaagat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 17867 606 + 80904711 agaggcagaaaaggatatctcatagtt---gctttactttgcatat-ttAAAAATT------GTGAC-------TTTCA-------------TGGCATAAATAATACTGGTTTATTATAG-AAGCACTAGAAAATGCATATGGACAAAAGTTGG-GATTAGGAGagacaaatgaagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcattgcagctttctaccaccaccaaaaattgcaaacaaccacacacccttcaaccggggaactaatcaacaac------------------------ggaagaccactcagcaatagaaaggaccaaactcctgg-------------------------------------tccatgcaactgacagatgaatct-----aacgcatttctctgtgtcaaagcagccagattcacggggcttcacagacgcactctct---gactg-cttcatggggaaatctggaaaaggcaacactattgagacagaaaacaggtcagtggttgcctggggctggggaactttctgg---ggtcatattctttatgtcgattgtggtggtggaaacaagactgtaccagcctggacaatacagcaagaccccatctctatcaaaaaactaaaaattagctgggcatggtggtgcatgcctgtagtcccaggtattcacaatgctgaggtgggaagat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 17630 606 + 80997621 agaggcagaaaaggatatctcatagtt---gctttactttgcatat-tttAAAATT------GTGAC-------TTCCA-------------TGGCATAAATAATACTGGTTTATTATAG-AAGCACTAGAAAATGCATATGGACAAAAGTTGG-GATTAGGAGagacaaatgaagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcattgcagctttctaccaccaccaaaaattgcaaacaaccacacacccttcaaccggggaactaatcaacaac------------------------ggaagaccactcagcaatagaaaggaccaaactcctgg-------------------------------------tccatgcaactgacagatgaatct-----aacgcatttctctgtgtcaaagcagccagattcacggggcttcacagacgcactatct---gactg-cttcatggggaaatctggaaaaggcaacactattgagacagaaaacaggtcagtggttgcctggggctggggAACTTTCTGG---GGTCATATTCTTTATGTCGATTGTGGTGGTGGAAACAAGACTGTaccagcctggacgatacagcgagaccccatctctatcaaaaaactaaaaattagctgggcatggtggtgcatgcctgtagtcccaggtattcacaatgctgaggtgggaagat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 29755 606 + 74645514 AGAGGCAGAAAAAGATATCTCATAGTT---GCTttactttgcatat-tttaaaatt------gtgac-------tTTCA-------------TGGCATAAATAATACTGGTTTATTATAG-AAGCACTAGAAAATGCATATGGACAAAAGTTGG-GATTAGGAGAGACAAATGAagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcATTGCAGCTTTCTACCACCACCAAAAACTGCAAACAACCACACACCCTTCAACTGGGGAACTAACCAACAAC------------------------GGAAGACCACTCAGCAATAGAAAGGACCAAACTCCTGG-------------------------------------TACATGCAACTGACAGATGAATCT-----AACGCATTTCTCTGTGTCAAAGCAGCCAGATTCACAGGGCTTCACAGACACACTATCT---GACTG-CTTCATGGGAAAATCTGGAAAAGGCAACACTATTGAGACAGAAAACaggtcagtggttgcctggggctggggaacTTTCCGG---GGTCATATTCTGTATGTTGATTGTGGTGGTGGAAACAAGACTGTACCAGCCTGGACGatacagcgagaccccatctctatcaaaaaactaaaaattagctgggcatggtggtgcatgcctgtagtcccaggtattcacaatgctgaggtgggaagat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 22666 605 + 75148670 agaggcagaaaaggatatctcatagtt---gctttactgtgcatat-tttAAAATT------GTGAC-------TTTCA-------------TGGCATAAATAATACTGGTTTATTATAG-AAACACTAGAAAATGCATATGGACAAAAGTTGG-GATTAGGAGaaagaaatgaagacgtat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------aaaaacctgttcattgcagctctctaccaccaccaaaaactgcaaacaaccacacaccctgcaaccggggaactaaccaacaac------------------------ggaagaccactcagcaatagaaagaaccaaactcctgg-------------------------------------tacatgcaactgacagatgaatct-----aatgcatttctctgtgtcaaagcagccagattcaca-ggcttcacagacacactatct---gactg-cttcgtgggaaaacctggaaaaggcaacactactgagacagaaaacaggtcagtggttgcctggggctggggAACTTTCTGG---GGTCATATTCTGTATGTTGACTGTGGTGGTGGAAACAAGACTGCaccagcctggacgatacagcgagaccccatctctatccaaaaattaaaaattagctgggcatggtggtgcatgcctgtagtcccaggtattcacaatgctgagctgggaagat i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 836300 658 - 1291538 aga-gcagaaaatgatatctcacagtt---gctttactttgcatttgtttTAAATT------TTGAT-------TTTTA-------------TGGCATAAATACTACTTGTTTATTATAG-AAACACTAGAAAATGCATAAGGACAAAACTTGG-GATTACGAGagagaaatgaagacatat-----------------------------------------------------------gtccacac-------------------------------------------------------------------------agaaacctgttcattgccgcgttctaccatcactaaaatttagaaac----acatgcccttcagctggggaactaaccaacaacaaacctgtggtttactctcatgatggaagcctattcagcaataaaaaggactgaactcctggcacctgcaactgacaaaagctggactcacagggcatatgcctgcaactgacagatgcatctc----aacacactccgctgcatgaaagaagccggactcacggggc-------acacactatct---gactgccttcatggggaagtctggaaaatgcaacactactgacacagaaaacaggtcagtggttgcctggtgctggggagctttctgg---ggtcatgttctgtatcttgattgtggtggtggtaataagattgtaccagcctgggcaatacagtgagaccccatctctacaaaagaatgaacacttagctgggcatggtggcgcatgcctgtattcccagctactcacaaggctgaggtgggaagat i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75774617 743 + 122082543 --aggatgaccctgactcctgatcctcctgcctctactttctaagt-gctaggattacagacatgaccatccagtttcaAGTTGCCGGTCTGTTATATGAATGATCCTGGTTTGTTAAAACAAACATTAGGAAGGCTGTGTGAGCAAACGGTGATGACAAAGGGTATGTAATGAAGATGTGTATGACACTTGTGGGGTTGttttgtatttgtgacacagtccccctagttctcagtgtgtagtccagactggccttgtacactccatccttccgactctacctcttaagtgatcatgtgcgcattgctgagcctggctTACACAATACTGGTTAATGGCCAATCTGCACCATCATCCAAAATTGTAACAGTCTGTGTGCTCTTCAACTGGTAAACTGATTAGCAAT----TCATGTTTTCTGCACATACCGAAAG-CTATGCAGCCA-ATCAAAGATGGCATCCCCAG-------------------------------------TGTATATACTGTGTGGGTGAACCTTAGTCAAATCATTCAT-TGCAGGAGAGAAGCTCAACT---------------AAGCAGCATCCAGAAGATG-CTTGATGTGAAA-TCTGGAAAAGGCGATGCTACTGGGATAGACAACAGGCCAGAGGATGCCTGGAGCTAAGGGAATTCTGGGTAAGAGCAAAACATCTGGCTTT---------------------TTGTATCCGCTGGTCCTAGACCCTTAGATTC--------------AACCAGGCGAGGgctggatttggtggcgcatacctgcaattccagttctt-ggaaggttgaggcaggaagat i mm10.chr11 C 0 I 805 e canFam3.chr9 15592075 10599 - 61074082 I a score=2929318.000000 s hg38.chr17_GL383563v3_alt 91185 1121 + 375691 -gcttgagcccaggagttcaaggctgcaatgagctatgattgcgccactgcactttggcctggacaacagagcaaaaccctgtctctaaa----aaaagaaaagaaaagaaaaaCTCACTGGATATGAATGATAcaggttgaggatccattatctgaaatgcttggaccagatgttttgaattttggattttttcatattttgtaatctttgcagtatatttaccagttcagc--atccctaa--------ctcaaaaattcaaa--------aatctgaaatcccaaacgcgccaataagcattccctttgagcgtcatgtcggtgcttggaatgtttggggttttggatttacagctttgggacgctcaacctgTACCTCAATAAACCTGATTT--TAAAAAAGTTTGGGGGGATTCCCCTAAG--CCCGCCACCCGGAGACAGCGGATTTCCTTAGTTACTTACTATGCTCCTTGGCCATTTCTCTAGGTATTGGTATATTGTGTCTGCTGTGAACTGTCCTTGGCCTGTTTGGTGAC-GGGTGAGGAGCAGGGACAGAAGGGTCCTGCGTGCCCTGCCTTCACAAGCCCCTGGAAGGAAAGTTGTTTTGGGATCTCTGCACCCTCAGCCTGGACAACTTGTGCCCATCTGGTGACCCCTCACTCAGCCACCAGACTTCCACGACAGG----------------------------------------------------------------------------------------------CTCCAGCCTCGGCACCTTCAGCCATGGACAGTTCCGCCAGCGTTGCCCTCTGTTCTGCTGTTTTCTCTACCAGAAGTGCCCTTCCCTCCTCACCTGACCACTCTGGGGAAATCCCTCAGCACCCTCCCTGAGCATACCCTACTCTGGCACAAGCCCACCCTGCAAAGCCCCTGAGGCCCGCCCTGTGGCGTCTCTCCCTCCCTTGCTGTCAGGACAGTGGTCCTGGCCACCGGGGCTCATGGAGCCgccctgtgccgtgtacctctgagccctctgcacagtgccttctgcTTGCCTGTGGCTTTGAGAAGAAACCCCTTCTGGTTATACATAAGACAGCCAGA----GAAGGGAGTTGCCCAGGGTGGCACAGCACGTTGCTGCCAGTTACTGCCATTTTCACAGGCATGAAATGGAGATAACAACAGGAGCGACCGCACAGGCTGCTGAGCGCGTCACAC s panTro4.chr17 81808 1118 + 82630442 -gcttgagcccaggagttcaaggctgcaatgagctatgattgcgccactgcactttggcctggacaacagagcaagaccctgtctctaaa----aaaagaaaagaaaagaaaaaCTCACTGGATATGAATGATAcaggttgaggatccattatctgaaatgcttggaccagatgttttgaattttggattttttcatattttgtaatctttgcagtatatttaccagttcagc--atccctaa--------ctcaaaaattcaaa--------aatctgaaatcccaaacgcgccaatgagcattccctttgagcgtcatgtcggtgcttggaatgtttggggttttggatttacagctttgggacgctcaacctgTACCTCAATAAACCTGATTT--AAAAAAAGTTTGGGGGGATTCCCCTAAG--CCCGCCACCCGGAGACAGCAGATTTCCTTAGTTACTTACTATGCTCCTTGGCCATTTCTCTACGTATTGGTAT--TGTGTCTGCTGTGAACTGTCCTTGGCCTGTTTGGTGAC-GGGTGAGGAGCAGGGACAGAAGGGTCCTGCGTGCCCTGCCTTCACAAGCCCCTGGAAGGAAAGTTGTTTTGGGATCTCTGCACCCTCAGCCTGGACAACTTGTGCCCATCTGGTGACCCCTCACTCAGCCACCAGACTTCCACGACAGG----------------------------------------------------------------------------------------------CTCCAGCCTCGGCACCTTCAGCCATGGACAGTTCCGCCAGTGTTGCCCTCTGTTCTGCTGTTTTCTCTACCAGAAGTGCCCTTCCCTCCTCACCTGA-CACTCTGGGGAGATCCCTCAGCACCCTCCCTGAGCACACCCTACTCTGGCACAAGCCCACCCTGCAAAGCCCCTGAGGCCCACCCTGTGGCATCTCTCCCTCCCTTGCTGTCAGGACAGTGGTCCTGGCCACTGGGGCTCACGGAGCCGCCCTGTGCCGTGTACCTCTGAGCCCTCTGCACAGTGCCTTCTGCTTGCCTGTGGCTTTGAGAAGAaaccccttctggttatacataagacagccaga----gaagggagttgcccagggtggcacagcacgttgctgccagTTACTGCCATTTTCGCTGGCATGAAATGGAGATAACAACAGGAGCGACCGCACAGGCTGCTGAGCGCGTCACAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3477760 1037 - 17838096 cgcttgagcccagga-ttcaaggctgcaatgagctatgattgcaccactgcactttggcctggacgacagagcaagaccctgtttctaaa----aaaagaaaagaaaaG-----CTCACTGGATATGAATGATAcaggttgagtatccattatctgaaatgcttggaccagatgttttgaattttggattttttcatattttgtaatatttgcagtatatttaccagttcagc--atccttaa--------ttcaaaatttcaaa--------aatctgaaatcccaaacactccaatgagcattccctttgagcgtcacgctggtgcttggaatgtttggggttttggatttacggatttgggacgctcaacctgTACCTCAATAAACCTGATTT-AAAAAAAAGTTTGGGGGGATGCCCCTAAG--CCCGCCACCCGGAGACAGCGGATTTCCTTAGTTACTTACTATGCTCCTTGGCCATTTCTCTACATATTGGTAT--TGTGTCTGCTGTGAATTGTCCTTGGCCTGTTTGGTGAC-GGGTGAGGAGCAGGGACAGAAGGGTCCCGCATGCCCTGCCTTCACAAGCCCCTGGAAGGAAAGTTGTTTTGGGATCTCTGTGCCCTCAGCCTGGACAACTTGTGCCCATCTGCTGACCCCTCACTCAGCCACCAGACTTCCACGACAGG----------------------------------------------------------------------------------------------CACCAGCCTTGGCACCTTCAGCCATGGACAGTTCCGCCAGCGTTGCCCTCTGTTCTGCTGTTTTCTCTACCAGAAGTGCCCTTCCCTCCTCACCTGACCACTCTGGGGAGATCCCTGAGCACCCTCCCTGAGCACACCCTGCTCTGGCACAAGCCCACCCTGCAAAGCCCCTGAGGCCTGCCCTGTGGCGTCTCTCCCTCCCTTGCTGTCAGGACAGTGGTCCTGGCCACCGGGGCTCATGGAGCCACCCTGTGCCATGTACCTTTGGGCCCTCTGCACAGTGCCTTCTGCTTGCCTGTGGCTTCGAGAAGAAACCCCTTCTGGTTATACATAAGAGAGCCAGA----GAAGGGA------------------------------------------------------------------------------GACTGAACATGCTGCTGGGCGTGTCACAC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 48366 1084 - 81552678 cgcttgagcccaggagttcaag----------------------------------ggcctggacaacagagcaagaccctgttttaaaa----aaaaaaaaaaaaaagaaaaaCTCACTGGATATGAATGATAcaggttgaggatccattatctgaaatgcttggaccggatgttttgaattttggatttttt-atattttgtaatatttgc-gtataattaccagttcggcatatccctag--------ttcaaaaattcaaa--------gatctgaaaccccagacgctgcaatgagcattccctttgagcgtcacgtcggtgcctggaatgtttggggttttggatttatggatttggggcgctcaacctgTACCTCAATAAACCTGATTT---AAAGAAGTTTGGGGGGATTCCCCTAAG--CCCGCCACCCGGAGACAGCGGGTGTCCTTAGTTACTTACTACGCTCCTTGGCCATTTCGCTACTTATCGGTAT--CGTGTCTGCTGTGAATTGTCCTTGGTCTGTTTGGTGAC-GGGTGAGGAGCAGGGACAGAAGGGTCCCGCATGCCCTGCCTTCAAAAGCCCCTGGAAGGAAAGTTGTTTTGGGATCTCTGCGCCCTCAGCCTGGACAACTTGTGCCCATCTGGTGACCCCTCACTCAGCCACCAGACTTCCAGGACAGG----------------------------------------------------------------------------------------------CACCAGCCTCGGCACCTTCAGCCACGGACAGTTCCACCAGCGCTGCCCTCTGTTCTGCTGTTTTCTCTACCAGAAGTGCCCTTCCCTCCTCACCTGACCACCCTGGGGAGATCCCTCAGCACCCTCCCTGAGCACACCCTGCTCTGGCATAAGCCCACCCTGCAAAGCCCCTGAGGCCTGCCCTGTGACGTCTCTCCCTCCCTTGCTGTGAGGACAGTGGTCCTGGCCACCGGAGCTCATGGAGGCACCCTGTGCCATATACCTCTGGGCCCTCTGCACAGTGCCTTCTGCTTGCCCGTGGCTTCGAGAAGAAACCCCTTCTGGTTATACATAAGAGAG-CAGA----GAAGGGAGTTGCCCAGGGTGGCACAGCAAGTTGCTGCCAGTTACTGCCATTTTCGCTGGCATGAAATGGAGATAACAACAGGAGCGACTGCATaggctgctgggcgtgtcacag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 18473 1219 + 80904711 cgcttgagcccaggagttcaaggctgcaatgagctataattgcaccactgcacttcagcctggacgacagggcaagaccctgtctctaaaaaagaaaagaaaacaaaagaaaaACTCACTGGGTATGAATGATAcaggttgaggatccattatctgaaatgcttggaccagatgttctgaattttgatttttttcatattttgtaatatttgcagtctatttaccagttcagc--atccctaatccaaaatttcaaaaattcaaa--------aatctgaaatcccaaacgctctaacgggcatttcctttgagcgtcatgtcagtgcttgaaatgtttggggttttggatttacagatttgggacactcaacctgTACCTCAATAAACCTGATTTAAAAAAGAAGGTTGGGGAGATTCCCCGAAGCCCCCACCA-CCGGAGACAGCGGATTTCCTTAGTTACTTACTAGGCTCCTTGGCCATTTCGCTACGTATTGGTTT--TGTGTCTGCTGTGAATTGTCCTTGGCCTGTTTGGTAAC-GGGTGAGGAGCAAGGACAGAAGCGTCCTGCATGCCCGGCCTTCCCAGGCCCCTGGAAGGAAAGTGGTTCTGGGGTCTCTGCGCCCTCAGCCTGGACA--TTGTGCCCATCTGCTGACCCCTCACTCAGCCACCAGACTTCCACAACTCAGCACGTTCAGCTATGCACAGTTCCACCAGCCTCAGCACGTTCAGCTATGCACAGTTCCAC---CAGCCTCAGCACGTTCAGCTATGCGCAGTTCCACCAGCCTCAGCACGTTCAGCTATGCGCAGTTCCACCAGCGGTGCCCTCTGTTCTGC---TTTCCCTGCCAGGAGCGCCCTTCCCTCCTCACCTGACCACTCCGCGGAGATCCCTCAGCACCGTCCCTGCGCACACGCTGCTCTGGCGCCAGCCCACCCTGCAAAGCCCCGGAGGCCTGCCCTGTGGCGTCGCTGTCTCCCTTGCTGTCAGGACAGTGGCCCTGGCCACTGGGGCTCATGGAGCCACCCTGTGCCATGTACCTCTGGCCCTTCTGCACAGCACCTTCCGCTTGCCTGTGGCTTCGAGAAGAaaccccttctggttatacataagagagccaga----gaagggagttgcccagggtggcacagcaagttactgccagTTACCGCCATTTTCACTGGCATGAAATGGACATAATAAC--GGGCGACTGCACAGGCTGCTGGGAGGGTCACAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 18236 1198 + 80997621 cgcttgagcccaggagttcaaggctgcaatgagctataattgcaccactgcacttcagcctggacgacagggcaagaccctgtctctaaaaaagaaaagaaaacaaaagaaaaaCTCACTGGGTATGAATGATAcaggttgaggatccattatctgaaatgcttggaccagatgttttgaattttgatttttttcatattttgtaatatttgcagtctatttaccagttcagc--atccctaatccaaaatttcaaaaattcaaa--------aatgtgaaatcccaaacgctctaacgggcatttcctttgagcgtcatgtcggtgcttgaaatgtttggggttttggatttacagatttgggacactcaacctgTACCTCAATAAACCTGATTTAAAAAAGAAGGTTGGGGAGATTCCCCGAAGCCCCCACCA-CCGGAGACAGCGGATTTCCTTAGTTACTTACTAGGCTCCTTGGCCATTTCGCTACGTATTGGTTT--TGTGTCTGCTGTGAATTGTCCTTGGCCTGTTTGGTAAC-GGGTGAGGAGCAAGGACAGAAGCGTCCTGCATGCCCGGCCTTCCCAGGCCCCTGGAAGGAAAGTGGTTCTGGGGTCTCTGCGCCCTCAGCCTGGACA--TTGTGCCCATCTGCTGACCCCTCACTCAGCCACCAGACTTCCACAACCGG-----------------------CACCAGCCTCAGCACGTTCAGCTATGCGTAGTTCCACCAG---CCTCAGCACGTTCAGCTATGCGTAGTTCCACCAGCCTCAGCACGTTCAGCTATGCGCAGTTCCACCAGCGGTGCCCTCTGTTCTGC---TTTCCCTGCCAGGAGCGCCCTTCCCTCCTCACCTGACCACTCCGCGGAGATCCCTCAGCACCGTCCCTGCGCACACCCTGCTCTGGCGCCAGCCCACCCTGCAAAGCCCCGGAGGCCTGCCCTGTGGCGTCGCTGTCTCCCTTGCTGTCAGGACAGTGGCCCTGGCCACTGGGGCTCATGGAGCCACCCTGTGCCATGTACCTCTGGCCCTTCTGCACAGCACCTTCCGCTTGCCTGTGGCTTCGAGAAGAaaccccttctggttatacataagagagccaga----gaagggagttgcccagggtggcacagcaagttactgccagttaccgccattttcactggcatgaaatggagataataacaggggcgactgcacaggctgctgggagggtcaCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 30361 1116 + 74645514 cgcttgagcccaggagttcaaggctgcaatgagctataattgcaccactgcacttcagcctggacgacagggcaagaccctgtctctaaaaaagaaaagaaaacaaaa-----------tgggtATGAATGATACAGGTTGAGGATCCATTATCTGAAAGGCTTGGACCAgatgttttgaattttgatttttttcatattttgtaatatttgcagTCTATTTACCAGTTCAGC--ATCCctaattcaaaatttcaaaaattcaaa--------aatctgaaatcccaaACGCTCCAATGGGCATTTCCTTTGAGCGTCATGTCGGTGCTTGAAATGGTTGGGGTTTTGGATTTACGGATTTGGGACACTCAACCTGTACCTCAATAAACGTGATTTAAAAAAGAAGGTTGGGGAGATTCCCCGAAG--CCCACCA-CCGGAGACAGCGGATTTCCTTAGTTACTTACTAGGCTCCTTGGCCATTTCGCTACGTATTGGTTT--TGTGTCTGCTGTGAATTGTCCTTGGCCTGTTTGGTAAC-GGGTGAGGAGCAAGGACAGAAGCGTCCTGCATGCCCGGCCTTCACAGGCCCCTGGAAGGAAAGTGGTTTTGGGATCTCTGCGCCCTCAGCCTGGACA--TTGTGCCCATCTGCTGACCCCTCACTCAGCCACCAGACTTCCACAACAGG----------------------------------------------------------------------------------------------CACCGGCCTCAGCACGTTCAGCTATGCACAGTTCCACCAGTGTTGCCCTCTGTTCTGT---TTTCCCTGCCAGGAGCGCCCTTCCCTCCTCACCTGACCACTCCGCGGAGATCCCTCAGCACCCTCCCTGCGCACACCCTGCTCTGGCACCAGCCCACCCTGCAAAGCCCCGGAGGCCTGCCCTGTGGCGTCTCTGTCTCCCTTGCTGTCAGGACAGTGGCCCTGGCCACTGGGGCTCATGGAGCCACCCTGTGCCATGTACCTCTGGCCCTTCTGCACAGCACCTTCCGCTTGCCTGTGGCTTCGAGAAGAAACCCCTTCTGGTTATACATAAGAGAGCCAGA----GAAGGGAGTTGCCCAGGGTGGCACAGCAAGTTACTGCCAGTTACCGCCATTTTCACTGGcatgaaatggagataataac-ggGGCGACTGCACAGGCTGCTGGGAGGGTCACAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 23271 1126 + 75148670 cgcttgagcccaggagttcaaggctgcaatgagctataattgcaccactgcacttccgcctggacgacagggcaagaccctgtctctaaaaaagaaaagaaaacaaaagaaaaaCTCACTGGATATGAATGATAcaggttgaggatccattatctgaaatgcttggaccagatgttttgaattttgatttttttcatgttttgtaatatttgcagtatatttaccagttcagc--atccctaattcaaaatttcaaaaattcaaa--------aatctgaaatcccaaacgctccaatgggcatttcctttgagcgtcatgtcgctgcttgaaatgtttggggttttggatttacggatttgggacactcaacctgTACCTCAATAAACGTGATTTAAAAAAGAAGGTTGGGGAGATTCCCCGAAG--CCCACCA-TCGGAGACAGCGGATTTCCTTAGTTACTTACTAGGCTCCTTGGCCATTTCGCTACGTATTGGTTT--TGTGTCTGCTGTGAACTGTCCTTGGCCTGTTTGGTAAC-GGGTGAGGAGCAAGGACAGAAGGGTCCTGCATGCCCGGCCTTCACAGGCCCTTGGAA-GAAAGTGGTTTTGGGATCTCTGCGCCCTCAGCCTGGACA--TTGTGCCCATCTGCTGACCCCTCACTCAGCCACCAGACTTCCACAACAGG----------------------------------------------------------------------------------------------CACCAGCCTCAGCACGTTCAGCTATGCACAGTTCCACCAGTGTTGCCCTCTGTTCTGT---TTTCCCTGCCAGGAGCGTCCTTCCCTCCTCACCTGACCACTCTGCGGAGATCCCTCAGCACCCTCCCTGAGCACACCCTGCTCTGGCACCAGTCCACCCTGCAAAGCCCCGGAGGCCTGCCCTGTGGCGTCTCTCCCTCCCTTGCTGTTAGGACAGTGGCCCTGGCCACTGAGGCTCATGGAGCCACCCTGTACCATGTACCTCTGGCCCTTCTGCACAGCACCTTCCGCTGGCCTGTGGCTTCGAGAAGAaaccccttctggttatacataagagagccaga----gatgggacttgcccagggtggcacagcaagttactgccagttaccaccattttcactggcatgaaatggagataataac-agggcgactgcacaggctgctgggagggtcatac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 836958 1102 - 1291538 cacttgagcccaggagttcaaggctacagtgagccatctttgcaccacgctactccagcctggatgacagagcaagaccctgtctg--------aaaaaaaaaggaaa---aaCCTCACAGGATGTGAATGATAcacgttgaggatccattatctgaaatgcttggaccagatgttttgaattttgga-tttctcagattttgtaacattttaagtgtatttaccagttcaga--atccctaattcagaatttcaaaaattcaaaaactgaacaatctgaaatctcaaatgcttcaataagcatttcctttgagcgtcatgtgagcacttagaatgttttgaattttgaatttttggatttgggatgctcaa-cTGTACCTCAAAAAACCTGACTAAAATAAAAAGTGCGGGGGAATTCCACTAAG---CCGCCGCCTGGAGACAGCAGTTTTCTTCAG----TTACTGTGCTCCTTGGCCATTTTGCTGCATGCTGGAAT--TGTTTCTGCTGTGAACTGTGCTTGGCCTGTTTTGTGACGGGGTGAAGAGCAGTGTCACAAGAGTCCTGCACACCCTGCCTTCACGAGTCCCTGGAAGGAAGGTGGTTTGGGGATTTCTGTGCCCTCAGCCTACACAACCTGTGTTCATCTAGTGACCCCTCACTCAGCCACCAGACTTCCACAATGGG----------------------------------------------------------------------------------------------CACCAGCCTGGGTGCCTTCAGCCACGGGCAG--CCATGGACAGT-TCCTCTGTTATGCTGTTTTCTCTGCTGGGAGTGCCCTTCCATCCTGATCTGA-CATTCTGGGGAGATCCCTCAGCAT----------------CTGCTCTGGCACCAGTGCACCCTGTGAAGCCCCAGAGGCCTGCCCTGTGGCGTCTCTCCCTCCCTTACTGTCAGGACAGTGGACCTGGCCCCTGGGGCTCATGAA--CTCCCCAAGTCATGCACCTC-GAGCCCCCTACACAGCGACTCCTGTTTGCCTGTGGCTTTGAGAAGaaa-cccttctggttctagataagagagctggagaaggaagggagttgcccagggtggcacagcaagttgctgccagTTTCCGCCATTTTCGCTGGTATGAAATGCAGATAACA---GAAGCGACTGCATAGGCTTCTGCGAGAGTCACAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I a score=696112.000000 s hg38.chr17_GL383563v3_alt 92306 313 + 375691 GCAGCCATCGCGCAGCTCAGGGATATTACGTGTAACTCGACATGTCAGCGATTGTCACAGGCACTGCTACTCCTGGGGTTTTCCATCAAACCCTCAAGAGCTGGGCCTGGGGTCAACTTCCAGCCTGGGGAAACTGGGGCAAGTATCACCAGAGATGAGCTTTATAAAAATAATGGTGC-TAgctgggcatggtggcttgcacctgtaatcccagcactttgggag-gccgagctaggaggatcgtttgagtccagcagtttgagaccagcctggccaatacggcaaaacccagtctctacaaaaaatacaaaaa s panTro4.chr17 82926 313 + 82630442 GCAGCCATCGCGCAGCTCTGGGATATTACGTGTAACTCGACATGTCAGCGATTGTCACAGGCACTGCTACTCCTGGGGTTTTCCATCAAACCCTCAAGAGCTGGGCCTGGGGTCAACTTCCAGCCTGGGGAAACTGGGGCAAGTATCACCAGAGATGAGCTTTATAAAAATAATGGTGC-TAgctgggcatgctggcttgcacctgtaatcccagcactttgggag-gccgagctaggaggatcgtttgagtccagcagtttgagaccagcctggccaatagggcaaaacccagtctctacaaaaaatacaaaaa i panTro4.chr17 C 0 M 766 s ponAbe2.chr17_random 3478797 314 - 17838096 GCAGTCATCGCACAGCTCAGGGATATTACGTGTAACTCGACATGTCAGTGATTGTCACAGGCACTGTTACTCCTGGGGTTTTCCATCAAACCCTCAAGAGCTGGGCCTGGGGTCAACTTCCAGCCTGGGGAAACCAGGGAAAGTATCACCAGAGATGAGGTTTATAAAAATAATGGTGCACagctgggcatgatggcttgcacctgtaatcccagcactttgggag-gccgagctaggaggattgtttgagtccaggagtttgagaccagcctggccaatatggcaaaacccagtctttacaaaaaatacaaaaa i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 19692 309 + 80904711 TCAGCCTTCGCACCGCCCAGGGATATTACGTGTAACTCGACATGTCAGCGATTGTCACAGGCACTGTTACTCCTGGGGTTTTCCCACAAACCCTCAAGAGGTGGGCCTGGGGTCAACTTCCA-----GGGAAACTGGGGCAAGTGTCACCAGAGATGAGGTTTATAAAAATAACGGTGCATAgctgggcatggtggcttgcacctgtaatcacagcactttgggag-gccgagctaggaggatcgcttgagtccaagagtttgagaccagcctggccaatatggcaaaacccagtctctacaaaaaatacaaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 19434 309 + 80997621 TCAGCCTTCGCACCGCCCAGGGATATTACGTGTAACTCGACATGTCAGCGATTGTCACAGGCACTGTTACTCCTGGGGTTTTCCCACAAACCCTCAAGAGCTGGGCCTGGGGTCAACTTCCA-----GGGAAACTGGGGCAAGTGTCACCAGAGATGAGGTTTATAAAAATAACGGTGCATAgctgggcatggtggcttgcacctgtaatcacagcactttgggag-gccgagctaggaggatcgcttgagtccaagagtttgagaccagcctggccaatatggcaaaacccagtctctacaaaaaatacaaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 31477 309 + 74645514 TCAGCCATCGCACCGCCCAGGGATACTACGTGTAACTCGACATGTCAGCGATTGTCACAGGCACTGTTACTCCTGGGGTTTTCCCACAAACCCTCAAGAGCTGGGCCTGGGGTCAACTTCCA-----GGGAAACTGGGGCAAGTGTCACCAGAGATGAGGTTTATAAAAATAACGGtgcatagctgggcatggtggcttgcacctgtaatcccagcactttgggag-gccgagctaggaggatcgcttgagtccaagagtttgagaccagcctggccaatatggcaaaacccagtctctacaaaaaatacaaaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 24397 309 + 75148670 tcagtcatcgcatCGCCCAGGGATATTACGTGTAACTCGACATGTCAGCGATTGTCACAGGCACTGTTACTCCTGGGGTTTTCCCACAAACCCTCAAGAACTGGGCCTGGGGTCAACTTCCA-----GGGAAACTGGGGTAAGTGTCACCAGAGATGAGGTTTATAAAAATAACGGTGCATAgctgggcatggtggcttgcacctgtaatcacagcactttgggag-gccgagttaggaggatcgcttgagtccaagagtttgagaccagcctggccaatatggcaaaacccagtctctacaaaaaatacaaaaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 838060 303 - 1291538 GCAGCCATCCCACAGCTCAGAGTTATT-------ACTCAATATGTCAGCAACTGTCACAGCCACTGTTACTCCTGGGGTTTTCCATCAAACTTTCCAGAGCTGGGCCTGGGGTCCACTTCCAGCCTGGGGACACTGAGTCAAGTGTCACCAGAAATGAGGTTTATAAAAAT---GGTGCATggctgggcacagtggctcacacctgttaccc--acactttggaagagtggatctaggagcatcacttgagtccaggactttgacaccagcctggccaatatggcgaaacccagtctgtacaaaaaatacaaaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I e nomLeu3.chr19 49450 0 - 81552678 C a score=114193.000000 s hg38.chr17_GL383563v3_alt 92619 67 + 375691 acaactagccaggcgtggtggtgcacacctgtagtcccagctactcaggaggctgagggggaaggac s ponAbe2.chr17_random 3479111 67 - 17838096 acaactagccaggcgtggtggcgcacacctgtagtcccagctactcaggaggctgagggagaaggac i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 20001 67 + 80904711 acaactagccaggcatgggggcacacagctgtagtcccagctactcgggaggccgaggcggatggat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 19743 67 + 80997621 acaactagccaggcatggtggcacacacctgtagtcccagctactcgggaggctgaggtagaagaac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 31786 67 + 74645514 acaactagccaggcatggtggcgcacacctgtagtcccagctactcgggaggctgaggtagaagaac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 24706 67 + 75148670 ccaactagccaggcatggcggcacacacctgtagtcccagctactcgggaggctgaggtagaagaac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 838363 67 - 1291538 acaactatccaggtatggtggtgcacacctgtagtcccagctactccggaggctgaggtggaaggac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I e nomLeu3.chr19 49450 0 - 81552678 C e panTro4.chr17 83239 766 + 82630442 M a score=95190.000000 s hg38.chr17_GL383563v3_alt 92686 41 + 375691 tgcttgagcccaggagtttgaggctgctgtgagctgtgatc s panTro4.chr17 84005 41 + 82630442 Tgcttgagcccacgagtttgaggctgctgtgagctgtgatc i panTro4.chr17 M 766 C 0 s ponAbe2.chr17_random 3479178 41 - 17838096 tgcttgagcctaggagtttgaggctgctgtgagctgtgatc i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 20068 41 + 80904711 tgcttgagcccaggagtttgaggctggtgtcagctttgatc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 19810 41 + 80997621 tgcttgagcccaggagtttgaggctgttgtcagctatgatc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 31853 41 + 74645514 tgcttgagcccaggagtttgaggctgttgTCAGCTATGATC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 24773 41 + 75148670 tgcttgagcccaggagtttgaggctgttgtaagctatgatc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 838430 41 - 1291538 tgcttaagcccaggagtttgaggctgctgtgagatatgatc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I e nomLeu3.chr19 49450 0 - 81552678 C a score=131171.000000 s hg38.chr17_GL383563v3_alt 92727 44 + 375691 gcatcactgcattccagccc-ggtgacagagtgagtcactgtctc s panTro4.chr17 84046 44 + 82630442 gcatcactgcattccagccc-ggtgacagagtgagtcactgtctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3479219 44 - 17838096 gcatcactgcattccagccc-agtgacagagtgagtcactgtctc i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 49450 44 - 81552678 gcattccagcattccagcct-ggtgacagagtgagtcactgtctc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 20109 44 + 80904711 gcatcactgcattccagccg-ggtgacagagtgagtcactgtctc i rheMac3.chr16 C 0 I 295 s macFas5.chr16 19851 44 + 80997621 gcatcactgcattccagccc-ggtgacagagtgagtcactgtctc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 31894 44 + 74645514 Gcatgactgcattccagccc-ggtgacagagtgagtcactgtctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 24814 44 + 75148670 gcatcactgcactccagccc-ggtgacagagtgagtcactgtctc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 838471 44 - 1291538 gcactactgc-ttccagcccaggtgacagagtaagtcactgtctc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I a score=20772.000000 s hg38.chr17_GL383563v3_alt 92771 11 + 375691 -aaaaaagaaag s panTro4.chr17 84090 11 + 82630442 -aaaaaagaaag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3479263 6 - 17838096 -aaaaaa----- i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 49494 11 - 81552678 -aaaaaagaaag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 20448 11 + 80904711 -aaaaAAGATAG i rheMac3.chr16 I 295 C 0 s macFas5.chr16 19895 11 + 80997621 -aaaaaagatag i macFas5.chr16 C 0 I 298 s papAnu2.chr16 31938 11 + 74645514 -aaaaaagatag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 24858 11 + 75148670 -aaaaaaggtag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 838515 12 - 1291538 aaaaaattaaag i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I a score=26856.000000 s hg38.chr17_GL383563v3_alt 92782 8 + 375691 gaagaaat s panTro4.chr17 84101 8 + 82630442 gaagaaat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3479269 8 - 17838096 gaagaaat i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 49505 8 - 81552678 gaagaaaT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 20459 8 + 80904711 GAAGAAAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 20204 8 + 80997621 GAAGAAAT i macFas5.chr16 I 298 C 0 s papAnu2.chr16 31949 8 + 74645514 gaagaaat i papAnu2.chr16 C 0 I 277 s chlSab2.chr16 24869 8 + 75148670 gaagaaat i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 838527 8 - 1291538 gaagaaat i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I a score=1496130.000000 s hg38.chr17_GL383563v3_alt 92790 540 + 375691 aaaga---aaacaaATAAAAATAATAGTGCAGACAAAAGGCCTTGACCCATCTAGCTTTGGCCCTCAGCATCAACCGCTAGATACGTCCCTCCCTTTCTTCTGGGGCACAGGTCA--CACTCTCTTCCAGGTCTAGGATGCAGCTGAGGGGTGCCCCTCTTACCATCTAATCTGTGCCCTTATTTCCTCTGC----TTTAGTGAGGAAGAGGCCCCTGGTCCATGAAGGGGCCTTTCAGAGACGGGGACCCCTGAGGAGCCCCGAGCAGCAGCCGTCGTGTCTCACCCAGGGTGTCTGAAACAGATGTGGAGGTCTCGGGTGAGGCGTGGCTCAGATACAGGGAGTGGCCCACAGCTC------------------GGCCTGTCTTTGAAAGGCCACGTGACCTGGCCCACGGCTGGCAGGTGGGACCCAGCTGCAGGGGTCCAGCAGCACCCACAGCAGCCACCTGTGGCAGGGAGGAGCTTGTGGTACAGTGGACAGGCCCTGCCCAGATGGCCCCCCGCCTGCCTGTGGAAGTTGACCAGACCATCTGTCACAGCAGG-TAAGAC s panTro4.chr17 84109 540 + 82630442 aaaga---aaacaaATAAAAATAATAGTGCAGACAAAAGGCCTTGACCCATCTAGCTTTGGCCCTCAGCATCAACCGCTAGATACGTCCCTCCCTTTCTTCTGGGGCACAGGTCA--CACTCTCTTCCAGGTCTAGGATGCAGCTGAGGGGTGCCCCTCTTACCATCTAATCTGTGCCCTTATTTCCTCTGC----TTTAGTGAGGAAGAGGCCCCTGGTCCATGAAGGGGCCTTTCAGAGATGGGGACCCCTGAGGAGCCCTGAGCAGCAGCCCTCGTGTCTCACCCAGGGTGTCTGAAACAGATGTGGAGGTCTCAGGTGAGGCGTGGCTCAGATATAGGGAGTGGCCCACAGCTC------------------GGCCTGTCTTTGAAAGGCCACATGACCTGGCCCACGGCTGGCAGGTGGGACCCAGCTGCAGGGGTCCAGCAGCACCCACAACAGCCACCTGTGGCAGGGAGGAGCTTGTGGTACAGTGGACAGGCCCTGCCCAGATGGCCCCCCGCCTGCCTGTGGAAGTTGACCAGACCATCTGTCACAGCAGG-TAAGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3479277 535 - 17838096 aaaga---aaacaaata-----aaTAGTGCAGACAAAAGGCCTCGACCCGTCTAGCTTTGGCCCTCAGCATCAACCGCTGGATACGTCCCTCCCTCTCTTCTGGGGCACAGGTCA--CACTCTCTTCCAGGTCTAGGATGCAGCTGAGGGGTGCCCCTCTTACCAACTAACCTGTGCCCTTATTTCCTCTGC---TTTTAGTGAGGAAGAGGCCCCTGGTCCATGAAGGGGCCTTTCAGAGATGAGGACCCCTGAGGAGACCTGAGCAGCAGCCCTCGTGTCTCACCCAGGGAGTCTGAAACAGACGT-GAAGTCTCAGGTGAGGTGTGGCTCAGATATAGGGAGTGGCCCACAGCTC------------------AGCCTGTCTTTGAAAGGCCACGTGACCTGGCCCACGGCTGGCAGGTGGGACCCAGCTGCATGGGTCCAGCGGCACCCACAACAGCCACCTGTGGCAGGGAGGAGCCTGTGGTACAGTGGACAGACCCTGCCCAGATGGCCCCCCGCCTGCCTGTGGAAGTCGACCAGACCATCTGTCACAGCAGG-TAAGAC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 49513 500 - 81552678 AAAGA---AAACAAATAAA---AATAGTGCAGACAAAAGGCCTTGACCCATCTCGCTTTGGCCCTCAGCATCGACCGCTGGACACGTCCCTCC--------------------------CTCTCTTCCAGGTCTAGGATACAGCTGAGGGGTGCCCCTCTTACCATCTAACCTGTGCCCTTATTTCCTCTGC---TTTTAGTGAGGAAGAGGCCCCTGGTCCATGAAGGGGCCTTTCAGAGATGGGGACCCCTGAGGAGACCTGAGCAGCAGCCCTCGTGTCTCACCCAGGGAGTCTGCAACAGATGTGGAGGTCTCAGGTGAGGCGTGGCTCAGATACAGGGAGTGGCCCACAGCTC------------------AGCCTGGCTTTGAAAGGCCACGTGACCTGGCCCACAGCTGGCAGGTGGGACCCAGCTGCAGGGGTCCAGCAGCACCCACAACAGCCACCTGTGGCAGGGAGGAGCCTGTGGTACAGTGGACAGGCCCTGCCCAGATGGCCCCCCG-CTGCCTGTGGAAGCCAACCAGACCATCTGTCA-------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 20467 544 + 80904711 AAAGA---AAATAAATAAAAATAATAGTGCAGACAGAAGGCCTTGAGCCATCTAGCTTTGGCCCTCAGCATCAACCGCTGGATACGTCCCTCCCTGTCTTCTGGGGCACAGTTCA--CACTCCCTTCCAGGTCTAGGATGCAGCTGAGGGGTGCCCCTTTTACCATCTAACCTGTGCCCTCATTTCCCCTGCTAATTTTAGTGAGGAAAAGGCCCTTGGTCCATGAAGGGGCCTTTCAGAGATGGGGACCGCTGAGGAGACCCGAGCAGCAGCCCTCGTGTCTCACTCAGGGAGTCTGAAACAGACGTGGAGGTCTCAGGTGACGTGTGGCTCAGATATAGGGAGTGGCCCACAGCTT------------------GGCGTGACTTTGAAAGGCCACATGACCTGAGACGTGGCTGGCAGGTGGGACCCAGCTGCAGGAGTCCAGCAGCACCCACAACAGCCACCTGTGGCAGGGAGGAGCCTGTGGCACAGCAGACGGGCCCTGCCCAGGCGGCCCCCTGCTTGCCTGTGGAAGTTGACCAGACTGTCTGTCACAGCAGG-TAAGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 20212 544 + 80997621 AAAGA---AAATAAATAAAAATAATAGTGCAGACAGAAGGCCTTGAGCCATCTAGCTTTGGCCCTCAGCATCAACCGCTGGATACGTCCCTCCCTGTCTTCTGGGGCACAGGTCA--CACTCCCTTCCAGGTCTAGGATGCAGCTGAGGGGTGCCCCTTTTACCATCTAACCTGTGCCCTCATTTCCCCTGCTAATTTTAGTGAGGAAAAGGCCCTTGGTCCATGAAGGGGCCTTTCAGAGATGGGGACCGCTGAGGAGACCCAAGCAGCAGCCCTCGTGTCTCACTCAGGGAGTCTGAAACAGACGTGGAGGTCTCAGGTGACGTGTGGCTCAGATATAGGGAGTGGCCCACAGCTT------------------GGCGTGACTTTGAAAGGCCACGTGACCTGAGACGTGGCTGGCAGGTGGGACCCAGCTGCAGGAGTCCAGCAGCACCCACAACAGCCACCTGTGGCAGGGAGGAGCCTGTGGCACAGCAGACGGGCCCTGCCCAGGCGGCCCCCTGCTTGCCTGTGGAAGTTGACCAGACTGTCTGTCACAGCAGG-TAAGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 32234 562 + 74645514 aaagataggaataaataaaaataatagtgcaGACAGAAGGCCTTGACCCATCTAGCTTTGGCCCTCAGCATCAACCGCTGGATACGTCCCTCCCTGTCTTCTGGGGCACAGGTCA--CACTCCCTTCCAGGCCTAGGATGCAGCTGAGGGGTGCCCCTTTTACCGTCTAACCTGTGCCCTCATTTCCCCTGC---CTTTAGTGACGAAAAGGCCCTTGGTCCATGAAGGGGCCTTTCAGAGATGGGGTCCCCTGAGGAGACCCGAGCAGCAGCCCTTGTGTCTCACTCAGGGAGTCTGAAACAGACGTGGAGGTCTCAGGTGACGTGTGGCTCAGATATAGGGAGTGGCCCACAGCTTGGCGTGACTTTGAAAGGCGGCGTGACTTTGAAAGGCCACGTGACCTGAGACGTGGCTGGCAGGTGGGACCCAGCTGCAGGAGTCCAGCAGCACCCGCAACAGCCACCTGTGGCAGGGAGGAGCCTGTAGCACAGCAGACAGGCCCTGCCCAGGCGGCCCCCTGCTTGCCTGTGGAAGTTGACCAGACTGTCTGTCACAGCAGG-TAAGAC i papAnu2.chr16 I 277 C 0 s chlSab2.chr16 24877 517 + 75148670 aaaga---aaataaataaaaATAATGGTGCAGACAGAAGGCCTTGACCCATCTAGCTTTGGCCCTCAGCATCAACCGCTGGATACGTCCCTCC--------------------------CTCTCTTCCAGGTCTAGGATGCAGCTGAGGGGTGCCCCTTTTACCATCTAACCTGTGCCCTCATTTCCCCTGC---TTTTAGTGAGGAAAAGGCCCTTGGTCCATGAAGGGGCCTTTCAGAGATGGGGACCCCTGAGGAGACCCGAGCAGCAGCCCTCGTGTCTCACCCAGGGAGTCCGAAACAGACGTGGAGGTCTCAGGCGAGGTGTGGCTCAGATATAGGGAGTGGCCCACAGCTT------------------GGCGTGACTTTGAAAGGCCACGTGACCTGACCCGTGGCTGGCAGGTGGGACCCAGCTGCAGGAGTCCAGCAGCACCCACAACAGCTGCCTGTGACAGGGAGGAGCCTGTGGTACAGCAGACAGGCCCTGCCCAGGCGGCCCCCTGCTTGCCTGTGGAAGTTGACCAGACTGTCTGTCACAGCAGG-TAAGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 838535 535 - 1291538 --------acagaaagaaaaATAATGGTGCAGACAAAAGGCACTGACCCATCTAGCTTTGCCCCTCAGCATCAGCCACTGGGCACATCCCTCC-CATCTTCCGGGGCACAGGTCACTCTCTCTCTTCCAGGTCAAGGATGCAGCTGAGGGGTACCCCTCTTACCATCTAGCCTGTGCACTTATTTCCCCTGC---TATTATCGAGGATGTGGGCCCTGGTCCATGAAGGTGCCTTTCAGAGACAGGCATCCCTGAGGAGACCTGAACAGCAGCCC-CATGTCTCACCCAGGGAGTATGAAACAGACATGGAGGTCTCAGGTGAGGTGTAGCTCAGATACAGGGAGTGGCCCACAGCTC------------------TGCTGG--TCTGAAAGGTAACATGACCTGGCCTGTGCCTGGCAGGTGGGACCCAGCTGAAGGGTTCCAACAGCACCTAGACCAGCCCCCTGTGGCAGGGAGGAGCCTATGGTGCAGTGGACAGGCCCTGCCCAGGAGGCCCCCTGCTTGCCCATGGAAGTCAGCTGAACCGACTGTCACAGCAGGTTAAGAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15592075 10599 - 61074082 I a score=267441.000000 s hg38.chr17_GL383563v3_alt 93330 85 + 375691 TCTGCTTTCTGGGCAACCCAGCAGGTGACCCTGGAATTCCTGTCCATCTGGCAGGTGGGCATTGAAACTGG--TTTAAAAATGTCAC s panTro4.chr17 84649 85 + 82630442 TCTGCTTTCTGGGCAACCCAGCAGGTGACCCTGGAATTCCTGTCCATCTGTCAGGTGGGCATTGAAACTGG--TTTTAAAATGTCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3479812 85 - 17838096 TCTGCTTTCTGGGAAACCCAGCAGATGACTCTGCAATTCCTGTCCATCTGGCAGGTGGGCATTCAAACTGG--TTTAAAAATTTCAC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 50013 82 - 81552678 ---GCTTTCTGGGCAACCCAGCAGGTGACCGTGGAATTCCTATCCATCTGGCAGGTGGGTATTGAAACTGG--TTTAAAAATTTCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 21011 85 + 80904711 CCTGCTTTCTGGGCAACCCAGCAGGTGACCCTGGAATTCCTGTCCATCTGGCAGGTGAGCATTGAAACGGG--TTTGAAAGTTTCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 20756 85 + 80997621 CCTGCTTTCTGGGCAACCCAGCAGGTGACCCTGGAATTCCTGTCCATCTGGCAGGTGAGCATTGAAACGGG--TTTGAAAGTTTCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 32796 85 + 74645514 TCTGCTTTCTGGGCAACCCAGCAGGTGACCCTGGAATTCCTGTCCATCTGGCAGATGAGCATTGAAACTGG--TTTGAAAGTTTCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 25394 84 + 75148670 TCTGCTTTCT-GGCAACCCAGCGGGTGACCCTGGAATTCCTGTCCATCTGGCAGGTGAGCATTGAAACTGG--TTTAAAAGTTTCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 839070 85 - 1291538 CTTGCTGTCTGAGCAACCCAGCAGACAGCCCTGGAATTCCTGTCCATCTGGTAGGTGGGCATATAACCTGA--TTTAAAAATTTCAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15602674 83 - 61074082 TCTGATTTTT----AATCCAGCATAGGACCCTGGAATTCCTGTCAACCTGGCAGTTGGACACTGAGCCAGatttttaaaaaaattat i canFam3.chr9 I 10599 I 79 e mm10.chr11 75775360 805 + 122082543 I a score=335309.000000 s hg38.chr17_GL383563v3_alt 93415 124 + 375691 ACCATAggccgggcacagtggctcacgcctgtaatcccagccctttgggaggccagggtgggtggatcacttgaggtcaggagt-tcaagaccagcctggccaacatggtgaaaccccg--tctact s panTro4.chr17 84734 125 + 82630442 ACCATAggccgggcacagtggctcacacctgtcatcccagccctttgggaggccagggtgggtggatcacttgaggtcaggagtgtcaagaccagcctggccaacatggtgaaaccccg--tctact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3479897 111 - 17838096 ACCATAggccgggcacagtggctcacgcctgtaatcccagcactgtgggaggccagggtgggtgg-------------aggagt-tcaagaccagcctggccaacatggtgaaacccca--tctact i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 50095 126 - 81552678 ACCATAggccgggcacagtggctcacgcctgtaatcccaacactttgggaggccagggtgggtggatcacttgaggtcaggagt-tcaggaccagcctggccaacatggtgaaaccccatctctact i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 21096 124 + 80904711 ACCATAggctgggcacagaggctcacacctgaaatcccagcactttgggaggccagggcaggcggatcacttgaggtcaggagt-tcaagaccagcctggccaccctggtgaaaccctg--tctact i rheMac3.chr16 C 0 C 0 s macFas5.chr16 20841 124 + 80997621 ACCATAggctgggcacagaggctcacacctgaaatcccagcactttgggaggccagggcgggcggatcacttgaggtcaggagt-tcaagaccagcctggccaccctggtgaaaccctg--tctact i macFas5.chr16 C 0 C 0 s papAnu2.chr16 32881 124 + 74645514 Accataggctgggcacagaggctcacacctgaaatcccagcactttgggaggccagggcgggcggatcacttgaggtcaggagt-tcaagaccagcctggccaccctggtgaaacccta--tctact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 25478 124 + 75148670 ACCATAgactgggcacagtggctcacacatgtaatcccagcactttgggaagccagggcgggcggatcacttaaagtcaggagt-tcaagaccagcctggccaacctggtgaaaccccg--tctact i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 839155 125 - 1291538 ACCATAGCTTgggcatcgtggctcatgcctataatcccagcactttgggacctgagag-gggtggattgcttgaggtcaggagt-tgaagaccagcctggctaacatggtgaaaccccatctctact i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15602757 79 - 61074082 I a score=487340.000000 s hg38.chr17_GL383563v3_alt 93539 176 + 375691 aaaaatacaaaaattagcctggcgtggtggcgcatgcctgtaatcccagctacttgggaagctgagggatgagaactgcttgaacctgggaggca--gacgttgcagtgagctgagatcacgccactgcactccagcctgggcaacagagtaagactctg-tctcaaaaaaaaaaaaaa s panTro4.chr17 84859 176 + 82630442 aaaaatacaaaaattagcctggcgtggtggcgcatgcctgtaatcccagctacttgggaagctgaggcaggagaactgcttgaacctgggaggca--gaggttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagtaagactctg-tctcaaaaaaaaaaaaaa i panTro4.chr17 C 0 I 3 s ponAbe2.chr17_random 3480008 176 - 17838096 aaaaatacaaaaattagctgggtgtggtggcgcatgcctgtaatcccagctacttgggaagctcagggacaagaactgcttgaacctgggaggca--gattttgcagtgagctgagatcacaccactgcactccagcctgggcaacagagtaagactctg-tctaaaaaaaaaaaaaaa i ponAbe2.chr17_random C 0 I 12 s nomLeu3.chr19 50221 176 - 81552678 aaaaatacaaaaattagccgggtgtggtggcgcatgtctgtaatcccagctacctgggaagctgaggggcgagaactgcttgaacccgggaggca--gagggtgcagtgagctcagatcacgccactgcactccagcctgggcaacagaataagactctg-tctcaaaaaaaaaaggaa i nomLeu3.chr19 C 0 I 3 s rheMac3.chr16 21220 176 + 80904711 aaaaatacaaaaattagccgagcgtggtgatgcatgcctgtaatcccagctacttgggaagctgagggatgagaactacttgaacctgggaagca--gcggttgcagtgagctgagatcatgccactgcactccagcctgggcaacagagtaagactctg-tctcaaaaacaaacaaac i rheMac3.chr16 C 0 I 19 s macFas5.chr16 20965 176 + 80997621 aaaaatacaaaaattagccgagcgtggtgatgcatgcctgtaatcccagctacttgagaagctgagggatgagaactacttgaacctgggaagca--gcggttgcagtgagctgagatcatgccactgcactccagcctgggcaacagagtaagactctg-tctcaaaaacaaacaaac i macFas5.chr16 C 0 I 20 s papAnu2.chr16 33005 176 + 74645514 aaaaatacaaaaattagccgagcgtggtgatgcatgcctgtaatcccagctacttgggaagctgagggatgagaactacttgaacctgggaagca--gcggttgcagtgagctgagatcatgccactgcacaccagcctgggcaacagagtaagactctg-tctcaaaaacaaacaaac i papAnu2.chr16 C 0 I 22 s chlSab2.chr16 25602 178 + 75148670 aaaaatacaaaaattagccgagcgtggtgatgcacgcctgtcatcccagctacttgggaagctgagggacgagaactacgtgaacctgggaggcaggggggttgcagtcagctgagatcgcgccactgcactccagcctgggcaacagagtaagactctg-tctcaaaaacaaacaaac i chlSab2.chr16 C 0 I 24 s calJac3.chrUn_GL286409 839280 176 - 1291538 aaaattacaaaaattagccaggcatggtggtgcatgcctgtaatctgagctacttgggaggctgaggcacaagaactgcttgaacctgggaggca--gatgttgaaatgagctgagattgtgcc-cagcactccagcctggacaacagagtgagactctgatctcaaaaaaaaaaaaaa i calJac3.chrUn_GL286409 C 0 I 4 s canFam3.chr9 15602836 124 - 61074082 ggagagggagaagcaggcc--------tgatgcagggctgc-atcccag--------gacgctggg-----atcacgacctaagct--gaaggca--gacgcttca-ccaactgagc-----------cacccaag--tgccccACTGAGCCAGA------TTTTAAAAC--------- i canFam3.chr9 I 79 C 0 e mm10.chr11 75775360 805 + 122082543 I a score=51707.000000 s hg38.chr17_GL383563v3_alt 93715 19 + 375691 TCACACCATTTTGGCTTCA s panTro4.chr17 85038 19 + 82630442 TCACACCATTTTGGCTTCA i panTro4.chr17 I 3 C 0 s nomLeu3.chr19 50400 19 - 81552678 TCACACCATTTTGGCTTCA i nomLeu3.chr19 I 3 C 0 s rheMac3.chr16 21415 19 + 80904711 CCACACCATTTGGGCTTCA i rheMac3.chr16 I 19 C 0 s macFas5.chr16 21161 19 + 80997621 CCACACCATTTGGGCTTCA i macFas5.chr16 I 20 C 0 s papAnu2.chr16 33203 19 + 74645514 ccacacCATTTGGGCTTCA i papAnu2.chr16 I 22 C 0 s chlSab2.chr16 25804 19 + 75148670 CCACACCATTTGGGCTTCA i chlSab2.chr16 I 24 C 0 s calJac3.chrUn_GL286409 839460 19 - 1291538 TCACACCATTTTGGCTTCC i calJac3.chrUn_GL286409 I 4 C 0 s canFam3.chr9 15602960 19 - 61074082 TTATACCATTTTGACTTTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e ponAbe2.chr17_random 3480184 12 - 17838096 I a score=73713.000000 s hg38.chr17_GL383563v3_alt 93734 22 + 375691 GATTGCATATCCTCCTGCAAGG s panTro4.chr17 85057 22 + 82630442 GATTGCATATCCTCCTGCAAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3480196 22 - 17838096 GATTGCATATCCTCCTGCAAGG i ponAbe2.chr17_random I 12 C 0 s nomLeu3.chr19 50419 22 - 81552678 GATTGCACATCCTTCTGCACGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 21434 22 + 80904711 GATTGCATATCCTCCTGCAAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 21180 22 + 80997621 GATTGCATATCCTCCTGCAAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 33222 22 + 74645514 GATTGCATATCCTCCTGCAAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 25823 22 + 75148670 GATTGCACATCCTCCTGCAAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 839479 20 - 1291538 GATTGC--ATCCTTCTGCAAGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15602979 22 - 61074082 GATTATCTTTCCTTCTGTATGG i canFam3.chr9 C 0 I 105 e mm10.chr11 75775360 805 + 122082543 I a score=93270.000000 s hg38.chr17_GL383563v3_alt 93756 39 + 375691 ATATATACGCGTGAAATTCAAGTCAATGACAAATCAGAA s panTro4.chr17 85079 39 + 82630442 ATATATACACGTGAGATTCAAGTCAATGACAAATCAGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3480218 39 - 17838096 ATATATACGCATGAGATTCAAGTCAATGAAAAATCAGAA i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 50441 33 - 81552678 GCGTACACGCGTGAGATTCAAGTCAGTGAAGAA------ i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 21456 39 + 80904711 ATATATACGAATGAGATTCAAGTCAATGACAAGTCAGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 21202 39 + 80997621 ATATATACGAATGAGATTCAAGTCAATGACAAGTCAGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 33244 38 + 74645514 ATATATACGAATGAGATTCAAGTCAATGACAA-tcagat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 25845 39 + 75148670 ATATATATGAATGAGATTCAAGTCAATGACAAGTCAGAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 839499 39 - 1291538 ATGTATACACATGAGCTTCAAGTCAATGACAAGTCAGAA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603001 105 - 61074082 I a score=370814.000000 s hg38.chr17_GL383563v3_alt 93795 135 + 375691 GAAAAAACATATATATACGCA-AACCAGTATCCTACTGTGTGTGTCGTT-TGTTGTGT------------------TTTCGACAGCTGTCCGTGTTATAATAATTCctctagttcaaatttattcatttttaacttcatagtaccacattctaca s panTro4.chr17 85118 135 + 82630442 GAAAAAACATATATATACGCA-AACCAGTATCCTACTGTGTGTGTCGTT-TGTTGTGT------------------TTTCGACAGCTGTCCATGTTATAATAATTCctctagttcaaatttattcatttttaacttcatagtaccacattctaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3480257 133 - 17838096 GAAAAAAC--ATATAGACGCA-AACCAGTATCCTACTGTGTGTGTCGTT-TGGtgtgt------------------tttcgacagctgtccatgttataataattcatctagttctactttattcctttttaactgcatagcaccacattctaca i ponAbe2.chr17_random C 0 I 603 s nomLeu3.chr19 50474 125 - 81552678 ----------AAACATACGCA-AACCAGTATCCTACTGTGTGTGCTGTT-TGGtgtgt------------------tttcgacagctgtccatgttataataattcatctagttctaatttattcatttttaactgcatagtaccacattctaca i nomLeu3.chr19 C 0 I 558 s rheMac3.chr16 21495 131 + 80904711 GAAAAAAT--ACACagacaca-aaccagtatcctactgtgtgt--catc-tggtgtgt------------------cttcaacagctgtccatgttataataattcatctagttctaatttattcatttttaactgcatagtactatattctaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 21241 131 + 80997621 GAAAAAAT--ACATAGACACA-AACCAGTATCCTACTGTGTGT--CATC-TGGtgtgt------------------cttcaacagctgtccatgttataataattcatctagttctaatttattcatttttaactgcatagtactatattctaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 33282 131 + 74645514 gaaaaaat--atatagacaca-AACCAGTATCCTACTGTGTGT--CATT-TGGTGTGT------------------CTTCAACAGCTGTCCATGTTATAATAATTCATCTAgttctaattcattcatttttaactgCATAGTACTATATTCTACA i papAnu2.chr16 C 0 I 605 s chlSab2.chr16 25884 130 + 75148670 GAAAAAAT--ATATAGACACA-AACCAGTATCCTACTGTGTGT--CATT-TGGtgtgt------------------cttcaacagctgtccatgttataatag-tcatctagttctaatttattcatttttaactgcatagtactacattctaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 839538 127 - 1291538 GAAAAA----ATATATATGCA-AACCAGTTTCCTACTGTGTGTGTCGTC-TG--Gtgt------------------tctgaacagctgtccatgttataataattcatatagttctaacttactca-ttttaacggcatagc-ctacattctaca i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15603106 147 - 61074082 GGAGATAC--ACAAATGtacagaaacagtatcacactgtgtgcactgttctgaagtttgcttttgggatcagcatgtttggatagctgtccatgt-----taatttaccaagtcctaatttattca-ctttaactgcctagtacttcattatacg i canFam3.chr9 I 105 C 0 e mm10.chr11 75775360 805 + 122082543 I a score=8595.000000 s hg38.chr17_GL383563v3_alt 93930 2 + 375691 ca s panTro4.chr17 85253 2 + 82630442 ca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3480993 2 - 17838096 ca i ponAbe2.chr17_random I 603 C 0 s nomLeu3.chr19 51157 2 - 81552678 ca i nomLeu3.chr19 I 558 C 0 s rheMac3.chr16 21626 2 + 80904711 ca i rheMac3.chr16 C 0 I 1583 s macFas5.chr16 21372 2 + 80997621 ca i macFas5.chr16 C 0 I 1491 s papAnu2.chr16 34018 2 + 74645514 CA i papAnu2.chr16 I 605 C 0 s chlSab2.chr16 26014 2 + 75148670 ca i chlSab2.chr16 C 0 I 1356 s calJac3.chrUn_GL286409 839665 2 - 1291538 ca i calJac3.chrUn_GL286409 C 0 I 780 s canFam3.chr9 15603253 2 - 61074082 ca i canFam3.chr9 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I a score=26102.000000 s hg38.chr17_GL383563v3_alt 93932 27 + 375691 -ctgcccatgtcccctcaagcttcccct s panTro4.chr17 85255 27 + 82630442 -ctgcccatgtcccctcaagcttcccct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3480995 27 - 17838096 -ctgcccacgtcccctcaagcttccccc i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 51159 27 - 81552678 -ctgcccatgtcccctcaagcttccccc i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34020 27 + 74645514 -CTGCCCATGTCCCCTCAAGCTTCCCCC i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15603255 27 - 61074082 tatg-ccacattttattaatctactcct i canFam3.chr9 C 0 I 2032 e mm10.chr11 75775360 805 + 122082543 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=124539.000000 s hg38.chr17_GL383563v3_alt 93959 147 + 375691 ggctcctgcaaccacaaatctactctctgcctctgtgggttgacctattctggacacgtcatagaaatagagtcctgcaacacgtggccgtctgtgtctggcttctctcgcttagcatcttgtttccaaggtcctcccacagtgtag s panTro4.chr17 85282 147 + 82630442 ggctcctgcaaccacaaatctactctctgcctctgtgggttgacctattctggacacttcatagaaatagagtcctgcaacatgtggccatctgtgtctggcttctctcgcttagcatcttgttttcaaggtcctcccacagtgtag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481022 147 - 17838096 agctcctgcaaccacaaatccactttctgcctctgtgggttggcctattctggacacttcatagaaatagggtcctgcagtatgaggccttctgtgtctggcttctctcacttagcatcttgctttcaaggtcctcccacagtgtag i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 51186 145 - 81552678 ggctcctgcaaccacaaatctactctctgcctc--tgggttgacctattctggacacttcatagaaatagagtcctgcaatacgtggccttctgtgtctggcttctctcacttagcatcttgctttcaaggttctcccacagtgtag i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34047 147 + 74645514 GGCTCCTGCAACCACAAATCTACTCTCTGCCTCTGTGGGTTGACCTATTCTGGACACTTCATAGAAATAAAGTCCTGCAATACgtggccttctgtgtctggcttctctcatttAGCATCTTGATTTCAAGGTCCACCCACGGTGTAG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=1146.000000 s hg38.chr17_GL383563v3_alt 94106 2 + 375691 ca s panTro4.chr17 85429 2 + 82630442 ca i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 51331 2 - 81552678 ca i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34194 2 + 74645514 CA i papAnu2.chr16 C 0 I 3 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I e ponAbe2.chr17_random 3481169 0 - 17838096 C a score=629.000000 s hg38.chr17_GL383563v3_alt 94108 3 + 375691 tgc s panTro4.chr17 85431 3 + 82630442 tgc i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 51333 3 - 81552678 cgc i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e papAnu2.chr16 34196 3 + 74645514 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I e ponAbe2.chr17_random 3481169 0 - 17838096 C a score=12468.000000 s hg38.chr17_GL383563v3_alt 94111 34 + 375691 acctgctacactc-------------------------------cttcttagggctgatattcca s panTro4.chr17 85434 34 + 82630442 acctgctacactc-------------------------------cttcttagggctgatattcca i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 51336 65 - 81552678 acctgctacactcctCAGGGCTGATCTTCCACGCACCTGCTACACTCCTCAGGGCTGATCTTCCA i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34199 34 + 74645514 ACCTGCTACACTC-------------------------------CCTCTTATGGCTGATAGTCCA i papAnu2.chr16 I 3 T 37 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I e ponAbe2.chr17_random 3481169 0 - 17838096 C a score=16944.000000 s hg38.chr17_GL383563v3_alt 94145 35 + 375691 CGCACCTGCTACACTCCTTCTTATGGCTGATATTC s panTro4.chr17 85468 35 + 82630442 CGGACCTGCTACACTCCTTCTTAGGGCTGATATTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 51401 35 - 81552678 CGCACCCGCTACACTCCTTCTTAGGGCTGATATTC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34196 35 + 74645514 CGTACCTGCTACACTCCCTCTTATGGCTGATAGTC i papAnu2.chr16 T 37 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I e ponAbe2.chr17_random 3481169 0 - 17838096 C a score=57664.000000 s hg38.chr17_GL383563v3_alt 94180 65 + 375691 CACGCACCTGCTACACTCCTTCTTAGGGCTGATATTCCACACACCCGCTACACTCCTTCTTAGGG s panTro4.chr17 85503 65 + 82630442 CACGGACCTGCTACACTCCTTCTTAGGGCTGATATTCCACACACCTGCTACCCTCCTTCTTAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481169 65 - 17838096 cacgcacctgctacactccttcttagggctgatattccaCGCACCTGCTACACTCCTTCTTAGGG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 51436 65 - 81552678 CACGCACCTGCTACATTCCTTCTTAGGGCTGATATTCCACGCACCCGCTACACTCCTTCTTAGGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34231 65 + 74645514 CACGCACCTGCTACACTCCATCTTAGGGCTGATATTCCACACACCTGCTACACTCCTTCTTAGGG i papAnu2.chr16 C 0 T 102 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=5076.000000 s hg38.chr17_GL383563v3_alt 94245 9 + 375691 CTGATATTC s panTro4.chr17 85568 9 + 82630442 CTGATATTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481234 9 - 17838096 CTGATATTC i ponAbe2.chr17_random C 0 T 74 s nomLeu3.chr19 51501 9 - 81552678 CTGATATTC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e papAnu2.chr16 34296 102 + 74645514 T e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=98177.000000 s hg38.chr17_GL383563v3_alt 94254 114 + 375691 CACGCACCCGCTACACTCCTTCTTAGGGCTGATATTCCACGCACCTGCTACACTCCTTCTTAGGGCTGATATTCCACGCACCTGCTACACTCCTTCTTAGGGCTGATATTCCAC s panTro4.chr17 85577 114 + 82630442 CACGCACCTGCTACCCTCCTTCTTAGGGCTGATATTCCACGCACGTGCTACGCTCCTTCTTAGGGCTGATATTCCACGCACGTGCTACGCTCCTTCTTAGGGCTGATAGTCCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481169 114 - 17838096 cacgcacctgctacactccttcttagggctgatattccaCGCACCTGCTACACTCCTTCTTAGGGCTGATATTCCACGCACCTGCTACACTCCTTCTTAGGGCTGATATTCCAC i ponAbe2.chr17_random T 74 C 0 s nomLeu3.chr19 51510 114 - 81552678 CACGCACCTGCTACACCCCTTCTTAGGGCTGATATTCCACGCACCTGCTACACTCCTTCTTAGGGCTGATATTCCACGCACCTGCTACATTCCTTCTTAGGGCTGATATTCCAC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34194 114 + 74645514 CACGTACCTGCTACACTCCCTCTTATGGCTGATAGTCCACGCACCTGCTACACTCCATCTTAGGGCTGATATTCCACACACCTGCTACACTCCTTCTTAGGGCTGGTAGTCCAC i papAnu2.chr16 T 102 T 37 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=2386.000000 s hg38.chr17_GL383563v3_alt 94368 3 + 375691 GCA s panTro4.chr17 85691 3 + 82630442 GCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481283 3 - 17838096 GCA i ponAbe2.chr17_random C 0 T 37 s nomLeu3.chr19 51624 3 - 81552678 GCA i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34271 3 + 74645514 ACA i papAnu2.chr16 T 37 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=20576.000000 s hg38.chr17_GL383563v3_alt 94371 22 + 375691 CCTGCTACACTCCTTCTTAGGG s panTro4.chr17 85694 22 + 82630442 CCTACTACACTCCTTCTTAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481249 22 - 17838096 CCTGCTACACTCCTTCTTAGGG i ponAbe2.chr17_random T 37 C 0 s nomLeu3.chr19 51627 22 - 81552678 CCTGCTACACTCCTTCTTAGGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34274 22 + 74645514 CCTGCTACACTCCTTCTTAGGG i papAnu2.chr16 C 0 T 37 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=12322.000000 s hg38.chr17_GL383563v3_alt 94393 14 + 375691 CTGATATTCCACGC s panTro4.chr17 85716 14 + 82630442 CTGATATTCCATGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481271 14 - 17838096 CTGATATTCCACGC i ponAbe2.chr17_random C 0 T 37 s nomLeu3.chr19 51649 14 - 81552678 CTGATATTCCACGC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34259 14 + 74645514 CTGATATTCCACAC i papAnu2.chr16 T 37 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=10603.000000 s hg38.chr17_GL383563v3_alt 94407 19 + 375691 AC-------------------------------------CTGCTACACTCCTTCTT s panTro4.chr17 85730 56 + 82630442 ACATGCTACACTCCTTCTTATGGCTGATATTCCACACACCTGCTACACTCCTTCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481248 19 - 17838096 -------------------------------------ACCTGCTACACTCCTTCTT i ponAbe2.chr17_random T 37 C 0 s nomLeu3.chr19 51663 19 - 81552678 -------------------------------------ACCTGCTACATTCCTTCTT i nomLeu3.chr19 C 0 I 442 s papAnu2.chr16 34273 19 + 74645514 -------------------------------------ACCTGCTACACTCCTTCTT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=910.000000 s hg38.chr17_GL383563v3_alt 94426 1 + 375691 A s panTro4.chr17 85786 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481267 1 - 17838096 A i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 52124 1 - 81552678 A i nomLeu3.chr19 I 442 C 0 s papAnu2.chr16 34292 1 + 74645514 A i papAnu2.chr16 C 0 T 37 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=13469.000000 s hg38.chr17_GL383563v3_alt 94427 17 + 375691 TGACTGATATTCCACGC s panTro4.chr17 85787 17 + 82630442 TGACTGATATTCCACGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481268 17 - 17838096 GGGCTGATATTCCACGC i ponAbe2.chr17_random C 0 I 1 s nomLeu3.chr19 52125 17 - 81552678 TGGCTGATATTCCACAC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34256 17 + 74645514 GGGCTGATATTCCACAC i papAnu2.chr16 T 37 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=546.000000 s hg38.chr17_GL383563v3_alt 94444 1 + 375691 A s panTro4.chr17 85804 1 + 82630442 A i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 52142 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34273 1 + 74645514 A i papAnu2.chr16 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I e ponAbe2.chr17_random 3481285 1 - 17838096 I a score=2000.000000 s hg38.chr17_GL383563v3_alt 94445 2 + 375691 CC s panTro4.chr17 85805 2 + 82630442 CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481286 2 - 17838096 CC i ponAbe2.chr17_random I 1 C 0 s nomLeu3.chr19 52143 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34274 2 + 74645514 CC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e calJac3.chrUn_GL286409 839667 780 - 1291538 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=24160.000000 s hg38.chr17_GL383563v3_alt 94447 19 + 375691 tgctacactccttcttagg s panTro4.chr17 85807 19 + 82630442 tgctacactccttcttagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481288 19 - 17838096 tgctacactccttcttagg i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 52145 19 - 81552678 tgctacactccttcttagg i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34276 19 + 74645514 TGCTACACTCCTTCTTAGG i papAnu2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 840447 19 - 1291538 tgctccactttttcttaag i calJac3.chrUn_GL286409 I 780 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=1000.000000 s hg38.chr17_GL383563v3_alt 94466 1 + 375691 g s panTro4.chr17 85826 1 + 82630442 g i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481307 1 - 17838096 g i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 52164 1 - 81552678 g i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 840466 1 - 1291538 g i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e chlSab2.chr16 26016 1356 + 75148670 I e papAnu2.chr16 34295 1 + 74645514 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=419356.000000 s hg38.chr17_GL383563v3_alt 94467 345 + 375691 ctgatattccactgcagggacagacttcatttgtgtatccattcatcagtggatggacacttggggtgtttccacttttggctgttgtggatagtgctgctatgaacattcctgcacaagttttaggatggacatgtttttcttatctcttgggtatataacaaggagtggaattgccagatcaaatggtgattctgtgtttaacttcctgaggaactatcagctgcttcccaaagtggccatcccattattctcaTAttatt----tttatttgt--ttattat-attttgaga--gtgtctcgctctgtcaccctggctggagtgcagtggtgtgatctcggctcac-tgcaa s panTro4.chr17 85827 348 + 82630442 ctgatattccactgcagggacagacttcatttgtgtatccattcatcagtggatggacgcttggggtgtttccacttttggctgttgtggatagtgctgctatgaacattcctgcacaagttttaggatggacatgtttttcttatctcttgggtatataactaggagtggaattgccagatcaaatggtgattctgtgtttaactttctgaggaactatcagctgcttcccaaagtggccatcccattATTGTCATAttatt----tttattcgt--ttattattattttgagacagtgtctcgctctgtcaccctggctggagtgcagtggtgtgatctcggctcac-tgcaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481308 352 - 17838096 ctgatattccactgcagggacagacttcatttgtgtatccattcatcagtggatggacgcttgggctgtttccacttttggctgttgtgaatagcgctgctatgaacattcctgcacaagttttaggatggacatgtttttcttatctcttgggtatataaccagaagaggaattgccagatcaaatggtgactctgtgtttaactttcggaggaactatcagctgcttcccaaagtggccatcccattATTATCACATTAtttttatttatttgt--ttattattattttgagacagtgtctcgctctgtcaccctggctggagtgcagtagtgcgatcgcggctcac-tgcaa i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 52165 349 - 81552678 ctgatattccactgcagggacagacttcatttgtgtatccattcatcagtggatggacgcttgggctgtttccagtgttggctgttgtgaatagtgctgctatgaacattcctgcacaagttttaggatggacatgtttttcttatctcttgggtatataactaaaagtggaattgccagatcaaatggtggctctgtgtttaattttctgaggaactattagctgcttcccgaagtggccatcccattATTGTCATATTAtt----tttatttgt--ttattattattttgagacagtgtctcactctgtcaccctggctggagtgcagtggtgcgatctcggctcacttgcaa i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 34296 343 + 74645514 CTGGTAGTCCACTGCAGGGACAGACCTCATTTGTGTATCCATTTATCAGTGGATGGACGcttgggctgtttccacttttggttgttgtgaatag---tgctatgaacATTCCTGCACAAGTTTTAGGATGGACGTGTTTTTCTTATCTCTTGGGTATataactaggagtggaattgccagATCAAATGGTGACtc--tgtttaactttctgaggGACTATTGGCTGCTTCCCAAAGTAGCCATCCCATTATtgtcatgttatt----tttatttat--ttattattattttcagacagtgtcttgctctgtcaccctggctggagtgcagtggtgcgatctcggctcac-tgcaa i papAnu2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 840467 350 - 1291538 ctgatcttctaccacaagaacagactgcttttgagcatccattcatcagtggatggagtcttgggctgtttccacttttggctgctgtgaataatgctgctatgaacattcttgtacaagttttaggatggacatatttttcttatctcttgggtatactactaggagtggaattgccagatcaaacggtgactctgtgtttaactttctgaggaactgtcaattgcttcccaaagtggctaccctatGATTGTCATAttatt----tttatttattattgctattattttgagacaatgtctcgctctgtcaccctgactggagtgcagtggtgtgatcttggctcac-tgcaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I e macFas5.chr16 21374 1491 + 80997621 I a score=121225.000000 s hg38.chr17_GL383563v3_alt 94812 81 + 375691 tctccacctcccaggttgaagtgattttcctgcctcagcctcccaagtagctgcgattacaggcgcccgccaccacaccca s panTro4.chr17 86175 81 + 82630442 tctccgcctcccaggttgaagtgattttcctgcctcagcctcccaagtagctgcgattacaggcgcccgccaccacaccca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481660 81 - 17838096 tctccgcctcccaggttgaagtggttttcctgcctcagcctcccaggtagctgggattacaggcacccgccaccacgccca i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 52514 81 - 81552678 tctccacctcccaggttgaagtgattttcctgcctcagcctcccaagtagctgggattacaggtgcccaccaccatgccca i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 22865 81 + 80997621 tctcgaactcccgacctcaggtgatccacccacttcagcctcccaaagtgctaggattacaggcatgagccaccatgcccg i macFas5.chr16 I 1491 C 0 s papAnu2.chr16 34639 81 + 74645514 tctacacctcccaggttgaagtgattttcctgcctcattctcccaagtagctgggattacaggctcctgccaccatgccca i papAnu2.chr16 C 0 I 308 s calJac3.chrUn_GL286409 840817 81 - 1291538 tctccaccacccaggttgaagtgattttcctgcctcagcctcccgaatagctgggattacaggtactcgccaccacacctg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I a score=85658.000000 s hg38.chr17_GL383563v3_alt 94893 73 + 375691 gctaa-tttttttatttttagtagagac-gggtttccccatattggccaagctggtctc-aaactcctgacctcag s panTro4.chr17 86256 73 + 82630442 gctaa-tttttttatttttagtagagat-gggtttccccatattggccaagctggtctc-aaactcctgacctcag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481741 73 - 17838096 gctaa-tttttttatttttagtagagac-gggtttccccatattggccaagctggtctc-aaactcctgacctcaa i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 52595 74 - 81552678 gctaattttttttatttttagtagagac-gggtttccccatattggccaagctggtctc-aaactcctgacctcaa i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 22946 55 + 80997621 gctaattttttttatttttagtagagacggggtttccccatattggccaggctga--------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 35028 54 + 74645514 gctaa-ttttttcatttttagtagagacggggtttccccatattggccaggctga--------------------- i papAnu2.chr16 I 308 C 0 s calJac3.chrUn_GL286409 840898 74 - 1291538 gctaa-tttttggatttttagtagagatagagtttccccatactggccaggatggtctcaaaactcctgacccag- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e chlSab2.chr16 26016 1356 + 75148670 I e rheMac3.chr16 21628 1583 + 80904711 I a score=846299.000000 s hg38.chr17_GL383563v3_alt 94966 296 + 375691 gtgatccgtgcgcctcggcctcccaaagtactgggattacaagcacgagccactgcactcagccTAATTTATTACTATTTTTAACTGTAGAGACAAGGTCTCAGTATGTTGCCAAGGCTGGTctcaaattcctgggttcaagcaatcctctcaagtagttaggactacagggacatgccactacaccaggctaa----------------tttttaatttttttgtagagatggaggtctcactatgttgcccaggatggtctcaaactcctagcctcaagcaatcctcctgccttggcctcccaaagtgtt s panTro4.chr17 86329 296 + 82630442 gtgatccgtgcgcctcggcctcccaaagtactgggattacaagcacgagccactgcactcggccTAATTTATTACTATTTTTAACTGTAGAGACAAGGTCTCAGTATGTTGCCAAGGCTGGTctcaaattcctgggttcaagcaatcctctcaagtagttaggactacagggacatgccactacaccaggctaa----------------tttttaatttttttctagagatggaggtctcactatgttgcccaggatggtctcaaactcctagcctcaagcaatcctcctgccttggcctcccaaagtgtt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3481814 296 - 17838096 gtcatccgcgtgcctcggcctcccaaattactgggattacaggcacgagccactgcacccggActaatttattactatttttaactgtagagacaaggtctcagtatgttgccaaggctggtctcaaattcctgggctcaagcaatcctctcaagtagttaggactacagggacacgccactacgcctggctaa----------------tttttaatttttttgtagagatgggggtctcactatgttgcccaggatggtctcaaacgcctagcctcaagcaatcctcctgccttggcctcccaaagtgtt i ponAbe2.chr17_random C 0 M 448 s nomLeu3.chr19 52669 296 - 81552678 gtgatctgcGcacctcggcctcccacagtactgggattataggcatgagccactgcacccggcctaatttatgACTAtttttaactgtagagacaaggtctcagtatgtcgccaaggctggtctcaaattcctgggctcaagcaatcctctcaagtagttaggactacggggacacgccactatgcccggctaa----------------ttgttaattattttgtagagatgggagtctcactatgttgcccaggatggtctcaaactcctagcctcaagcaatcctcctgccttggcctcccaaagtgtt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 23211 295 + 80904711 gtgatccatatgcctcggcctcccaaagtactgggattataggcatgagccactgtacccggccTAAtttattattatttttaactgtagagacaaggtctcaggatgttgccaaggctggtctcaaattcccaggctcaagcaatcctctcaagtagctaggactacaggcacatgccactacacccagctaa-----------------tttttttttttttttagagatgggggtctcactatgttgcccaggatgttctcaaactcctagcctcaagcgatcctcctgccttggcctcccaaagtgtt i rheMac3.chr16 I 1583 C 0 s macFas5.chr16 23001 296 + 80997621 gtgatccatatgcctcggcctcccaaagtactgggattataggcatgagccactgtacccggccTAATTTATTATTATTTTTAACTGTAGAGACAAGGTCTCAGGATGTTGCCAAGGCTGgtctcaaattcccaggctcaagcaatcctctcaagtagctaggactacaggcacatgccactacacccagctaa----------------ttttttttttttttttagagatgggggtctcactatgttgcccaggatgttctcaaactcctagcctcaagcgatcctcctgccttggcctcccaaagtgtt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 35082 312 + 74645514 gtGATCCatatgcctcggcctcccaaaatactgggattataggcatgagccactgtacccggccaaatttattattatttttaactgtagagacaaggtctcaggatgttgccaaggctggtctcaaattcccgggctcaagtaatcctctcaagtagctaggactacaggcacatgccactatacccagctaattttttttttttttttttttttttttttttttagagatgggggtctcactatgttgcccaggatgctctcaaactcctagcctcaagcgatcctcctgccttggcctcccaaagtgtt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 27372 299 + 75148670 gtgatccatatgcctcggcctcccaaagtactgggattataggcatgagccactgcacccggccTAAtttattattatttttaactgtagagacaaggtctcaggatgttgccaaggctggactcaaattcctgggctcaagcaatcctctgaagtagctaggaccacaggcacatgccactatgcccagctaa-------------tttttacttttttttttgtagagatgggggtctcactatgttgcccaggatgttctcaaactcctagcctcaagcgatcctcctgccttggcctcccaaagtgtt i chlSab2.chr16 I 1356 C 0 s calJac3.chrUn_GL286409 840972 273 - 1291538 gtgatccgcccacctcagcctccccaagtgcttggaatgcaggcatgagccactgcacatggccTAATGTATTATtatttttaactgtagagacaaggtctcagtatgttgcccaggctAGTctcaaactcctgggctcaagcaatcctcccaagtagctaggactacaggcacacgccactatgcccggctaa----------------tttttaaatttttggtagagatggggg-----------------------tctcaaactcccagcctcaagcaatcctcctgccttggccttccaaagtgtt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I a score=73843.000000 s hg38.chr17_GL383563v3_alt 95262 33 + 375691 cagaatgtaagtgtaactcactgcacctgCCAC s panTro4.chr17 86625 33 + 82630442 gggaatgtaagtgtaactcactgcacctgCCAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 52965 33 - 81552678 gggaatgtaagtgtaagtcactgcacctgCCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 23506 33 + 80904711 gggaatgtaagtggaagtcactgcacctgCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 23297 33 + 80997621 gggaatgtaagtggaagtcactgcacctgCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 35394 33 + 74645514 gggaatgtAAGTGTAAGTCACTGTACCTGccac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 27671 33 + 75148670 gggaatgtaagtggaagtcactgtacctgCCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 841245 33 - 1291538 gggaatataagtgtgagtcactgcacctgCACC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I e canFam3.chr9 15603282 2032 - 61074082 I e ponAbe2.chr17_random 3482110 448 - 17838096 M a score=359275.000000 s hg38.chr17_GL383563v3_alt 95295 142 + 375691 ATACAATTTTTAAAGTGACAGAAATATGATCATGGCCA-TGGGAATGGTGCCCCTAGAGCTGTGCCACGAGGAGTACTGGCCTCTTCATGGTGCCAAGATGTCCCTGAGGCCTTAGTCACCTGGGTCCTTGGTGTCCCCTAGG- s panTro4.chr17 86658 142 + 82630442 ATACAATTTTTAAAGTGACAGAAATATGATCATGGCCA-TGGGAATGGTGCCCCTAGAGCTGTGCCACGAGGAGTACTGGCCTCTTCATGGTGCCAAGATGTCCCTGAGGCCTTAGTCACCTGGGTCCTTGGTGTCCCCTAGG- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 52998 142 - 81552678 ATGCAATTTTTAAAGTGACAGAAATGTGATCATGGCCA-TGCGAATGGTGCCCCTAGAGCTGTGCCACGAGCAGTACTGGCCTCTTCATGGTGCCAAGATGTCCCTGAGGCCTTAGTCACCTGGGTCCTTGGTGTCCCCTAGG- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 23539 142 + 80904711 ATACAATTTTTAAAGTGACAGAAATATGATCATGGCCA-TGGGAATGGTGCCCCCAGAGCTGTGCCATGAGGAGTACCGGCTTCTTCATGGTGCCAGGATGTCCCTGAGGACTTAGTCCCCTGGGTCCTTGGTGTCCCCTGGG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 23330 142 + 80997621 ATACAATTTTTAAAGTGACAGAAATATGATCATGGCCA-TGGGAATGGTGCCCCCAGAGCTGTGCCATGAGGAGTACCGGCCTCTTCATGGTGCCAGGATGTCCCTGAGGACTTAGTCCCCTGGGTCCTTGGTGTCCCCTGGG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 35427 142 + 74645514 atacaatttttaaagtgaCAGAAATATGATCATGGCCA-TGGGAATGGTGCCCCGAGAGCTGTGCCATGAGGAGTACTGGCCTCTTCATGGTGCCAGGATGTCCCTGATGCCTTAGTCCCCTGGGTCCTTGGTGTCCCCTGGG- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 27704 142 + 75148670 ATACAATTTTTAAAGTGACAGAAATATGATCACGGCCA-TGGGAGTGGTGCCCCCAGAGCTGTGCCATGAGGAGTACTGGCCTCTTCATGGTGCCAGGATGTCCCTGAGGCCTTAGTCCCCTGGGTCCTTGGTGTCCCCTGGG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 841278 143 - 1291538 ATATAATTTTAAAAGTGGTAGGAATACAATCACGGCCAGTGGGGATGGTGCCCCCAGAGCTGTGCCACAAGTAGTACTGGCCTCTTCATGGTGCCAAGATGCCCCCGAGGCCTCAGTCACCTGGGTCCCTGGTGTCCCCTAGG- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15605314 101 - 61074082 ATAGGATTTTAAAACTGACAGAAATATAATAGTGGCCAGTGGGCATGGTAGCTCCAGAGTTGGGTCATG-GGAGCACTGG------------------------------------------GGCTCCTCACTGTCCCCTCAGG i canFam3.chr9 I 2032 C 0 e mm10.chr11 75775360 805 + 122082543 I e ponAbe2.chr17_random 3482110 448 - 17838096 M a score=168432.000000 s hg38.chr17_GL383563v3_alt 95437 54 + 375691 TCAGGGCCATCCCTCTGT---CATTCCCCCTCCCTGAAGCACCTGCCC------------CTCCTTTCT s panTro4.chr17 86800 54 + 82630442 TCAGGGCCATCCCTCTGT---CATTCCCCCTCCCTGAAGCACCTGCCC------------CTCCTTTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3482564 54 - 17838096 TCAGGGCCATCCCTCTGT---CATTCCCCCTCCCTGAAGCACCTGCCC------------CTCCTTTCT i ponAbe2.chr17_random M 448 C 0 s nomLeu3.chr19 53140 54 - 81552678 TCAGGGCCATCCCTCTGT---CATTCCCCCTCCCTGAAGCAGCTGCCC------------CTCCTTTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 23681 52 + 80904711 TCAGGGCCATTCCTCTGT---CAT--CCCCTCCCTGAAGCACCTGCCT------------CTCCTTTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 23472 52 + 80997621 TCAGGGCCATTCCTCTGT---CAT--CCCCTCCCTGAAGCACCTGCCT------------CTCCTTTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 35569 52 + 74645514 TCAGGGCCATTCCTCTGT---CAT--CCCCTCCCTGAAGCACCTGCCT------------CTCCTTTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 27846 52 + 75148670 TCAGGGCCATTCCTCTGT---CAT--CCCCTCCCTGAAGCACCTGCCT------------CTCCTTTCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 841421 54 - 1291538 TTAGAGCCATTCCTCTGT---CATTCCCCCTCCCTGAAGCACCTGCCT------------CTCCTTTCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15605415 69 - 61074082 CCAGGCTCATCCCTGCTTCTACGTCTTCACTCCTTTATTCCTCTACTTAAATAGGAATACCTCCTTTCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75775360 805 + 122082543 I a score=1967598.000000 s hg38.chr17_GL383563v3_alt 95491 610 + 375691 GCTGAACTAAATTCCTCCCCAAGTCT-CAGTTTTCCAGAGTCTCCCTGTGAGCTCACACTCATACCTAC-CTAGTTTCTGAAGA--GCCCCGAGCACTGACGGTAGTCACTGTGGCACCTGTAGCA-CCCTCTCCAAAGGGTCGCCAGCTCCTGCCTGGCTCTCAGAGCTACA----CAGCCTCTCCTGACCAGGCTCACAGCTCCACAGCTCTGCGGCCCAGGCCACCTGGCATGGCCCCCTGAGTTAGTGTCTCTCCCCAGGCCCACCATCAG-CCCTGTTGGTAGAGCTGGGTGGACTCTTATCCGCATCTGTAGCACCATTATAGGGCTGGGCAAATGTGGGCAGTTGCAAAGGCCTGGCAGAGTTCCTCTGCATCCTCCCCCAGCCTCCTGGCTACCCCCGGCACTGGCCCCGCCTTC---------------------------------------TGTCCCCTCCTGCAA---------CTCATGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACtaa--------------------tacctg-----------------------------------------catgacc-------ctgggaag------------------ccactcag-----cttctctgtccctcagtttccccatctgtgaaat-gggCTGGCCATGCTTAACCCCTGGAGTTGCCAAGGTAGCCCATCAGGGAACACA s panTro4.chr17 86854 610 + 82630442 GCTGAACTAAATTCCTCCCCAAGTCT-CACTTTTCCAGAGTCTCCCTGTGAGCTCACACTCATACCTAC-CTAGTTTCTGAAGA--GCCCCGAGCACTGACGGTAGTCACTGTGGCACCTGTAGCA-CCCTCTCCAAAGGGTCGCCAGCTCCTGCCTGGCTCTCAGAGCTACA----CAGCCTCTCCTGACGAGGCTCACAGCTCCACAGCTCTGCGGCCCAGGCCACCTGGCATGGCCCCCTGAGTTAGTGTCTCTCCCCAGGCCCACCATCAG-CCCTGTTGGTAGAGCTGGGTGGACTCTTATCCGCATCTGTGGCCCCAGTATAGGGCTGGGCAAATGTGGGCAGTTGCAAAGGCCTGGCAGAGTTCCTCTGCATCCTCCCCCAGCCTCCTGGCTACCCCCAGCACTGGCCCCGCCTTC---------------------------------------TGTCCCCTCCTCCGA---------CTCAAGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACtaa--------------------tatctg-----------------------------------------catgacc-------ctgggaag------------------ccactcag-----cttctctgtccctcagtttccccatctgtgaaat-gggctggccatgcttaacccctggagttgCCAAGGTAGCCCATCAGGGAACACG i panTro4.chr17 C 0 I 1487 s ponAbe2.chr17_random 3482618 595 - 17838096 GCTGAACTAAATTCCTCCCCAAGTCT-CACTTTTCCAGAGTCTCCCTGTGAGCTCACACTCATACCTAC-CTAGTTTCTGAAGA--GCCCCGAGCACTGATGATAGTCACTGTGGCACCTGTGGCACCCCTCTCCAAAGGGTCGCCAGCTCCTGCCTGGCTCTCAGAGCTACA----CAGCCTCTCCTGACCAGGCTCACAGGTCCCCAGCTCTGCGGCCCAGGCCACCTGGCATGGCCCCCTGAGTTAGTGTCTCTCCCCAGGC-----------------TGGTAGAGCTGGGTGGACTCTTATCCGCATCTGTGGCCCCAGTATAGGGCTGGGCACATGTGGGCAGTTGCTAAGGCCTGGCAGAGTTCCTCTGCAGCCTCTCCCAGCCTCCTGGCTACCCCCGGCACTGGCCCTGCCTTC---------------------------------------TGTCCCCTCCTCTGA---------CTCATGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACGat--------------------tatctg-----------------------------------------catgacc-------ctgggaag------------------ccattcag-----cttctctgggcctcagtttccccatctgtgaagt-gagctggccatgcttaacccctggagttgCCAAGGTAGCCCATCAGGGAACACG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 53194 608 - 81552678 GCTGAACTAAATTCCTCCCCAAGTCT-CACTTTTCCAGAGTCTCCCTGTGAGCTCACACTCATACCTAC-CTGGTTTCTGAAGA--GCCCCAAGCACTGATGGCAGTCACTGTGGCACCTGTGGCACCCCTCTCCAAAGGGTCGCCAGCTCCTGCCTGGCTCTCAGAGCTACA----CAGCCTCTCCTGACCAGGCTCACAGGTCCACAGCTCTG-GACCCAGGCCACCTGGCATGGCCCCCTGAGTTAGAGTCTCTCCCCAGGCCCACCATCAG-CCCTGTTGGTAGAGCTGGGTGGACTCTTATCCGCATCTGTGGCCCCAGTATAGGGCTGGGCACATGTGGGCAGTTGCCAAGGCCTGGCAGAGTTCCTCTGCAGCCTCTCCCAGCCTCCTGGCTACCCCTGGCACTGGCCCCGCCTTC---------------------------------------TGTCCCCTCCTCCGA---------CTCATGG-CCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACtaa--------------------tatctg-----------------------------------------catgacc-------ctgggaag------------------ccactcag-----cttctctgggcctcagtttccccatctgtgaaat-gggctggccatgcttaacccctggagttgCCAAGGTGGCCCAGCA-GGAACATG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 23733 614 + 80904711 GT-GAACTGAATCCCTCTCCAAGTCT-CACTTTCCCAGCATCTCCCTGTGAGCTCACACTCATACCTAC-CTAGTTTCTGGAGA--GCCCCAGGCACTGACGGTAGTCACTGCGGCACCTGCGGCACCCCTCTCCAAAGGGTCGCCAGCTCCTGCCTGGCTCTCAGAGCTGCA----CAGCCTCTCCTGACCAGGCTCACAGGTCCACAGCTCTGAGGCCCAGGTCACCTGGCATGG-ACCCTGAGTTAGTGTCTCTTCCCAGGACCCCCATCAGCCCCTGTTGGTAGAGCTGGGTGGACTCTTATCTGCATCTGTGGTCCCAGTATAGGGCTGGGCACACGTGAGCATTTGCTAAGGCCTGGCTGAGTTCCTCTGCCACCTCCCCCAGCCTCCTGGCTACCCCTGGCACTGGCCCCGCCTTC---------------------------------------TGTCCCCTCCTCCGACCTC-----CTCATGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACtaa--------------------tatctg-----------------------------------------catgact-------ctgggaag------------------ccactcag-----cttctctgggcctcagtttctccatctgtgaagt-gggccggccatgtttaacccctggagttgCCAAGGGAGCCCATCAGGGAACACG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 23524 614 + 80997621 GT-GAACTGAATCCCTCTCCAAGTCT-CACTTTCCCAGCATCTCCCTGTGAGCTCACACTCATACCTAC-CTAGTTTCTGGAGA--GCCCCAGGCACTGACGGTAGTCACTGCGGCACCTGCGGCACCCCTCTCCAAAGGGTCGCCAGCTCCTGCCTGGCTCTCAGAGCTGCA----CAGCCTCTCCTGACCAGGCTCACAGGTCCACAGCTCTGAGGCCCAGGTCACCTGGCATGG-ACCCTGAGTTAGTGTCTCTTCCCAGGACCCCCATCAGCCCCTGTTGGTAGAGCTGGGTGGACTCTTATCTGCATCTGTGGTCCCAGTATAGGGCTGGGCACATGTGGGCATTTGCCAAGGCCTGGCAGAGTTCCTCTGCCACCTCCCCCAGCCTCCTGGCTACCCCTGGCACTGGCCCCGCCTTC---------------------------------------TGTCCCCTCCTCCGACCTC-----CTCATGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACtaa--------------------tatctg-----------------------------------------catgact-------ctgggaag------------------ccactcag-----cttctctgggcctcagtttccccatctgtgaagt-gggCCGGCCATGTTTAACCCCTGGAGTTGCCAAGGGAGCCCATCAGGGAACACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 35621 614 + 74645514 GC-GAACTGAATCCCTCTCCAAGTCT-CACTTTTCCAGCATCTCCCTGTGAGCTCACACTCATACCTAC-CTAGTTTCTGGACA--GCCCCAGGCACTGACGGTAGTCACTGTGGCACCTGCGGCACCCCTCTCCAAAGGGTCGCCAGCTCCTGCCTGGCTCTCAGAGCTGCA----CAGCCTCTCCTGACCAGGCTCACAGGTCCACAGCTCTGAGGCCCAGGTCACCTGGCATGG-ACCCTGAGTTAGTGTCTCTTCCCAGGACCACCATCAGCCCCTGTTGGTAGAGCTGGGTGGACTCTTATCTGCATCTGTGGCCCCAGTATAGGGCTGGGCATATGTGGGCATTTGCCAAGGCCTGGCAGAGTTCCtctgccacctcccccagcctcctggcTACCCCTGGCACGGGCCCCGCCTTC---------------------------------------TGTCCCCTCCTCCGACCTC-----CTCATGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACTAA--------------------TATCTG-----------------------------------------CATGACT-------CTGGGAAG------------------CCACTcag-----cttctctgggcctcagtttccccatctgtgaagt-gGGCTGGCCATGTTTAACCCCTGGAGTTGCCAAGGGAGCCCATCAGGGAACACG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 27898 614 + 75148670 GC-GAACTGAATCCCTCTCCAAGTCT-CACTTTTCCAGCATCTCCCTGTGAGCTCACACTCATACCTAC-CTAGTTTCTGGAGC--GCCCCAGGCACTGACGGTAGTCACTGTGGCACCTGCGGCACCCCTCTCCAAAGGGTCGCCGGCTCCTGCCTGGCTCTCAGAGCTACA----CAGCCTCTCCTGACCAGGCTCACAGGTCCACAGCTCTGGGGCCCAGGTCACCTGGCATGG-ACCCTGAGTTAGTGCCTCTTCCCAGGACCACCATCAGCCCCTGTTGGTAGAGCTGAGTGGACTCTTATCTGCATCTGTGGCCCCAGTATAGGGCTGGGCACATGTGGGCATTTGCCAAGGCCTGGCAGAGTTCCTCTGCCACCTCCCCCAGCCTCCTGGCTACCCCTGGCACTGGCCCTGCCTTC---------------------------------------TGTCCCCTCCTCCGACCTC-----CTCATGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAGGCCTGGACA-TAGCATCAGGTGA-----TAACtaa--------------------tatctg-----------------------------------------catgact-------ctgggaag------------------ccactcag-----cttctctgggcctcagtttccccatctctgaagt-gggCTGGCCATGTTTAACCCCTGGAGTTGCCAAGGGAACCCATCAGGGAACACG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 841475 600 - 1291538 GCTGAACTAAATTCCTCCCTAAGTCT-CCCCTTTCCAGAGTCTCCCTGCGAGCTCAGACTCATACCTAC-CTAGTTTCTGCAGA--GCTCCAAGCACTGCAGGCGGCCGCTGTAGCACCTGTGGCA-CCCTCTCCAAAGGGCCA-GGGCTCCTGCCTGGCTCTCAGAGCTACA----CAGCCCATCCTGGACAGGCTCACAGATCCACAGCTCTGGGGCCCAGGCCACCTGGCATGG--CCCT---TTAGTGGCTCTCCCCAGGACCACCATTGGCCTCCACTGGTAGAGCTGGGTAGACTCTTATCCACATCTGTGGCCCCAAGATAGGGCTGGGCACAGGTGGGCAGTTGCCAAGGCCTGGAAGACTTTCTCTGCTGCCTCTCCCAGCCTCCTGGTGGGCCCTG---------CCTTCTCC---------------------------------------TATCCCCTCCTCCAAACTG-----CTCATGGCCCCTCCTGGGC--------CCCTCAGTCACAGA----------GAAGCCTGGACA-TGGCATCAGGAGA-----TAactaa--------------------tatctg-----------------------------------------catgaac-------ctgggaag------------------ccactcag-----cttatctgggcctcagtttccccacctgtgacat-tagCTGGCCATGCTTAACCCCTGGAGTTGCCAAAGGAGCCCATCAGGGAACATG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75776165 700 + 122082543 gtcAAGCTGAATTCTTC-CCAAGGCT-CTTCTCAGGAGATGATCCCTGTGAACTCAGA-TGGCATTTACACTA--TTGTGAATT--GTGCCAAGCACTAAGGGTAGGCTATGTGGCACTTGCTCCCTTCTTCTCTAAAAGGCCACCTCCTTCTACCTAGCCCCTGGATCTCTAAGAGCAGCCTAACCCGGTC-------CAGATCTACTCTTGTGGGGCCCAGGCCA-CTGGTACCA--CCCCTAGCCAGTGTCTATTTGTAGCTTTTCTATCAG-------TGGTAGGGA-GAGGAGACAC------------------------GGGGCCTGGGCACACAGG----------AAGACTTGGCAAAGGTCTCCTGCCAGTTCCCCAAGCCTCCAGGCT---CCCGGCACTGGGCCTGCCTCTTCCTAGAACTTGCTTGAGCTACTAGTGACCTTGTATCACTGGAcccaggtttgatctccagcgctggaggcccatgtgtggcagttcacatcatcagctgcagagatcgcatttgaggcggaggcagtagcatctgaagatcatgtaacttg--------------------aatttggcttcgcagtaaattcaagggcagcctggaatacatgtggccatgtcccCTATGTCCAAAAAGAGATAACTATTCCCTCTCCCACTGGGCGacccttctgcagacttcagttcccccatctatgaaat-gagacggctTTGCTTAACCCC-AGAATCACAAAAGGAACCCAGAAGAAAACACC i mm10.chr11 I 805 I 16 s canFam3.chr9 15605484 576 - 61074082 GCTGACCCCAATTCTTCCCCACATCTACCCTTTGAGAAAGCCTCAATGGGAATCCAGACTAATATCCAT-CTTTTATTTGCAGAAGGCCCAGGGCCCTGAGGGTGCTCAGTGCGCCACCTGCCTCCTTCCTAACTGGAGGGCCACCAGCCCCTGCCTCCCTCTCAGAGT--CA----TAGCCCATGCTGG-------CACAGGTTCATGACTCTGGAGCCCATGGTACTTTGCATGGCCCCCTGACTTAGGGTTTCTCTCCAGCACCACCATGAG-TCCCACTGGCAGGG-TGGGTGGACT-TTCTCAGCTTCTGTGCTACCAGCATAGGCCTGGGTGCACACAGGCAG----------------------CACTGAGTCTTCACTGGATCTCCTGG-----TCTGGCCCAGGCCCAGTCCTA-----------------------------------------------CCTCCAA---------CCCA--GTCCTTTCTGAGG--------TCA-CAGTCAATGG----------GAGGTCTGAATG-GGGTGTCAGGAGA-----GAACTATtctctctctctctctctctctctctg-----------------------------------------catgacc-------tgggaaag---------------------------------tctacaggcctcagtttccccatctgtgaaatggggctggtcagacttaacccccagcattgccaaaggagtacagaagaggataca i canFam3.chr9 C 0 I 14 a score=486600.000000 s hg38.chr17_GL383563v3_alt 96101 149 + 375691 GCGCCC-CTGTACCTCAGGCACTCCCTGGGTGCCTGCCACCTGGGACCACGGAGCCGG-CACAC-GGACC-CCCGTCCTTGGAGGTGAAGACG-TGGCAGGTGG-TCACGCGCAC-G-------GCACACTCACG-TTTTCACGTAGGGGTCCGAGTAGCCGTT s panTro4.chr17 88951 149 + 82630442 GCGCCC-CTGTACCTCAGGTACTCCCTGGGTGCCTGCCACCTGGGACCACGGAGCCGG-CACAC-GGACC-CCCGTCCTTGGAGGTGAAGACG-TGGCAGGTGG-TCACACGCAC-G-------GCACACTCACG-TTTTCACGTAGGGGTCCGAGTAGCCATT i panTro4.chr17 I 1487 C 0 s ponAbe2.chr17_random 3483213 148 - 17838096 GCGCCC-CTGTACCTCAGGCACTCCCTGGGTGCCTGCCACCTGAGACCACGGAGCCGG-CACAC-AGA-C-CTCGTCCTTGGAGGTGAAGAGG-TGGCAGGTGG-TCACATGCAC-G-------GCACACTCACG-TTTTCACGTAGGGGTCCGAGTAGCCATT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 53802 149 - 81552678 GTGCCC-CTGTACCTCAGGTACTCCCTGGGTGCCTGCCACCTGAGACCACGGAGCCGG-CACAC-GGACC-CCCGTCCTTGGAAGTGAAGATG-TGGCA-GTGG-GCACATGCACGG-------GCACACTCACGTTTTTCACGTA-GGGTCCGAGTAGCCATT i nomLeu3.chr19 C 0 M 513 s rheMac3.chr16 24347 149 + 80904711 GCGCCC-CTGTACCTCAAGTACTCCCTGGGTGCCTGCCACCTGAGACCACGGAGCCGG-CACAC-GGACC-CCCGTCCTTAGAGGCGAAGAGG-TAGCAGGTGG-TCACGCGCGC-A-------GCACACTCACG-TTTTCACGTAAGGGTCCGAGTAGCCGTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 24138 149 + 80997621 GCGCCC-CTGTACCTCAAGTACTCCCTGGGTGCCTGCCACCTGAGACCACGGAGCCGG-CACAC-GGACC-CCCGTCCTTAGAGGCGAAGAGG-TAGCAGGTGG-TCACGCGCGC-A-------GCACACTCACG-TTTTCACGTAAGGGTCCGAGTAGCCGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 36235 149 + 74645514 GCGCCC-CTGTACCTCAAGTACTCCCTGGGTGCCTGCCACCTGAGACCACGGAGCCGG-CACAC-GGACC-CCCGTCCTTAGAGGTGAAGAGG-TGGCAGCTGG-TCACGCGCGC-A-------GCACACTCACG-TTTTCACGTAAGGGTCCGAGTAGCCGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 28512 149 + 75148670 GCGTCC-CTGTACCTCAAGTACTCCCTGGGTGCCTGCCACCTGAGACCACGGAGCCGG-CACAC-AGACC-CCTGTCCTCAGAGGTGAAGAGG-TGGCAGGTGG-TCACGCGCAC-A-------GCACACTCACG-TTTTCACGTAAGGGTCCGAGTAGCCGTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 842075 129 - 1291538 GCACCC-CTGAACCTCAGCTGCTCCCTGGGTGCCTGTCACCTGAGACCATGGAGGC-----------------------CAGAGGTGAGGAGG-TGGCAGGAGG-TCACATGCAT-G-------GCACACTCACG-TTTTCACGTAGGGGTCCGAGTAGCCATT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75776881 147 + 122082543 GTTGCT-CTGA-----GGAAACCCCCTTAGTGCCTCTCATGCTGGGCTCTGGCTCCAGCCATATAGGACT-CTGGTTCTCCCAGGTGAGCAGG-------GGAG-TCAAGCGCAG-GCCTGGTCGCACACTCACG-TTTTCACATAGGGGTCCGAGTAGCCATT i mm10.chr11 I 16 C 0 s canFam3.chr9 15606074 153 - 61074082 GTACCCGCTGTGCTTCAGGAGCTCTTTTAGTGCTTGCCACATTAGACTCCTGATCTCA-TCCAC-AGACCTCCTGTCCTTTGAGGTGAGGGGGCTAGGAGATGGCTGGCCTGGGC-C-------ATGCACTCACG-TCTTCACGTAGGGGTCCGAGTAGCCGTT i canFam3.chr9 I 14 C 0 a score=338596.000000 s hg38.chr17_GL383563v3_alt 96250 84 + 375691 GGCGTCCATGGCGGCCAGGTGGGCGCACCGCACGATGCCTACCAGCAGGCCTTGCTTCTGTGAGCTGTACTTGAGGGAGATGAG s panTro4.chr17 89100 84 + 82630442 GGCGTCCATGGCGGCCAGGTGGGCGCACCGCACGATGCCTACCAGCAGGCCCTGCTTCTGCGAGCTGTACTTGAGGGAGATGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3483361 84 - 17838096 GGCGTCCATGGCGGCCAGGTGTGCGCACCGCACGATGCCCACCAGCAGGCCCTGCTTCTGCGAGCTGTACTTGAGGGAGATGAG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 24496 84 + 80904711 GGCGTCCATGGCGGCCAGGTGTGCGCACCGCACAATGCCCACCAGCAGGCCCTGCTTCTGCGAGCTGTACTTGAGGGAGATGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 24287 84 + 80997621 GGCGTCCATGGCGGCCAGGTGTGCGCACCGCACGATGCCCACCAGCAGGCCCTGCTTCTGCGAGCTGTACTTGAGGGAGATGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 36384 84 + 74645514 GGCGTCCATGGCGGCCAGGTGTGCGCACCGCACGATGCCCACCAGCAGGCCCTGCTTCTGCGAGCTGTACTTGAGGGAGATGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 28661 84 + 75148670 GGCATCCATGGCGGCCAGGTGTGCGCACCGCACGATGCCCACCAGCAGGCCCTGCTTCTGCGAGCTGTACTTGAGGGAGATGAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 842204 84 - 1291538 GGCGTCCATGGCAGCCAGGTGTGCGCACCGCACGATGCCCACCAGCAGGCCCTGCTTCTGTGAGCTGTACTTGAGGGAGATGAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777028 84 + 122082543 AGCATCCATGGCAGCCAGGTGTGCACAGCGCACGATGCCCACCAGCAGGCCCTGCTTCTGTGAGCTGTACTTGAGGGAGATGAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15606227 84 - 61074082 GGCATCCATGGCAGCCAGGTGTGCACAGCGCACAATGCCGACCAGCAGGCCCTGCTTCTGTGAGCTGTACTTGAGGGAGATCAG i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 53951 513 - 81552678 M a score=419077.000000 s hg38.chr17_GL383563v3_alt 96334 101 + 375691 GATGCGGCCCCGCTCCTCCAGGGACTTGTCTTCAGTCTTGTCCACCTGTTGGACGGGACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTCTCTT--------------GGCCGT s panTro4.chr17 89184 101 + 82630442 GATGCGGCCCCGCTCCTCCAGGGACTTGTCTTCGGTCTTGTCCACCTGTTGGACGGGACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTCTCTT--------------GGCCGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3483445 101 - 17838096 GATGCGGCCCCGCTCCTCCAGGGACTTGTCTTCAGTCTTGTCCACCTGTCGGACGGGACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTGTCTT--------------GGCCGT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 54466 101 - 81552678 GATGCGGCCCCGCTCCTCCAGGGACTTGTCTTCGGTCTTGTCCACCTGTTGGACGGAACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTCTCTT--------------GGCCGT i nomLeu3.chr19 M 513 C 0 s rheMac3.chr16 24580 101 + 80904711 GATGCGGCCCCGCTCCTCCAGGGACTTGTCTTCGGTCTTGTCCACCTGTTGGACGGGACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTCTCTT--------------GGCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 24371 101 + 80997621 GATGCGGCCCCGCTCCTCCAGGGACTTGTCTTCAGTCTTGTCCACCTGTTGGACGGGACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTCTCTT--------------GGCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 36468 101 + 74645514 GATGCGGCCCCGCTCCTCCAAGGACTTGTCTTCGCTCTTGTCCACCTGTTGGACGGGACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTCTCTT--------------GGCCAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 28745 101 + 75148670 GATGCGGCCCCGCTCCTCCAGGGACTTGTCTTCGGTCTTGTCCACCTGTTGGACAGGACGGTCACT---CAGT---CCTCACCTGCTCCCAC-CCCTCTCTT--------------GGCCAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 842288 101 - 1291538 GATACGGCCCCGCTCCTCCAGGGACTTGTCTTCGGTCTTGTCCACCTGTTGGAGGGACCAGTCCTT---TAGT---CCTTACCTGCCCCCAC-CCCTCTCTC--------------GGCCAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777112 118 + 122082543 GATGCGGCCTCGCTCTTCCAGAGACTTGTCCTCTGCCTTGTCCACCTGCAGGAGAGGGTGGTCACTCTGCTGT---TCTTGTCTGCTTCCAC-CTTCCTAGCTAAGCAGACAGTGAGGCTGC i mm10.chr11 C 0 C 0 s canFam3.chr9 15606311 104 - 61074082 GATTCGTCCCCGCTCCTCCAGGGACTTGTCTTCTGTCTTGTCCACCTGTTGGGCAGGG-AGCCACT---TGGCTAGCCTCACCTGTTCCCACTCCCTCCCTC--------------AGCTAT i canFam3.chr9 C 0 I 11 a score=71400.000000 s hg38.chr17_GL383563v3_alt 96435 27 + 375691 CCTTGGCCTCCTCTTCCTGAGCCCGCC s panTro4.chr17 89285 27 + 82630442 CCTTGGCCTCCTCTTCCTGAGCCCGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3483546 27 - 17838096 CCTTGGCCTCCTCTTCCTGAGCCCGTC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 54567 13 - 81552678 CCTTGGCCT--------------CGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 24681 27 + 80904711 ACTTGGCCTCCTCTTCCTGAGCCCACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 24472 27 + 80997621 ACTTGGCCTCCTCTTCCTGAGCCCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 36569 27 + 74645514 ACTTGGCCTCCTCTTCCTGAGCCCACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 28846 27 + 75148670 ACTTGGCCTCTTCTTCCTGAGCCCACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 842389 27 - 1291538 CCTTAGCCTCCCCTTCCTAATCCCGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777230 27 + 122082543 CCCTAGTCTCCTCCCCTCACGTCCACC i mm10.chr11 C 0 I 9 e canFam3.chr9 15606415 11 - 61074082 I a score=724884.000000 s hg38.chr17_GL383563v3_alt 96462 262 + 375691 CA-TCCGGCTGCTGCAGCCGGGCCTGGTCACGGTCCCTGGTGAGTGGCCTCACTGTGAACTCACAGCCCTTCTGTCATCTCTTCCCTCCCAAGGGCTCTTCCAGGGCTGGATCTGACCCACACCCTCCCTGTTCTTGGCTGCATGTGGCCTACGGTGGCCTTCACAGCCCAGCAAGGGCCAGCCcaggggttggcaactgcagcccgggggccagatcaggcccgacgcctggctctgtgtgggatgtgagctaagcatggct s panTro4.chr17 89312 262 + 82630442 CA-TCCGGCTGCTGCAGCCGGGCCTGGTCACGGTCCCTGGTGAGTGGCCTCACTGTGAACTCACAGCCCTTCTGTCATCTCTTCCCTCCCAAGGGCTCTTCCGGGGCTGGATCTGACCCACACCCTCCCTGTTGTTGGCTGCATGTGGCCTACGGTGGCCTTCACAGCCCAGCAAGGGCCAGCCcaggggttggcaactgcagcccgggggccagatcaggcccgacgcctggctctgtgtgggatgtgagctaagcatggct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3483573 249 - 17838096 CACTCCGGCTGCTGCAGCCGGGCCTGGTCAGGGTCCCTGGTGAGTGGTCTCCCTGTGAACTCACAGCC------------CTTCCCTCCCAAGGGTTTTTCCAGGGGTGGATCTGACCCTCACCCTCCCTGTTCTTGGCTGCA--TGGCCTGGGGTGGACTTCACAGCCCAGCAAGGGCCAGCCcaggggttggcaactgcagcccgggggccagatcaggcccaacgcctggctctgtgtgggatgtgagctaagagtggct i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 54580 261 - 81552678 CACTCCGGCTGCTGCAGCCGGGCCTGGTCAGGGTCCCTGGTGAGTGGTCACACTGTGAACTCACAGACCTTCTGTCATCTCTTCCCTCCCAAGCGTTCTTCCAGGGGTGGATCTGACCCTCACCCTCCCTGTTCTTGGCTGCA--TGGCCTGTGGTGGCCTTCACAGCCCAGCAAGGGCCAGCCcagagcttggcacctgcagcccgggggccagatcaggcccaacgcctggctctgtgtgggatgtgagctaagagtggct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 24708 258 + 80904711 CACTCTCACTGCTGCAGCCAGGCCCGGTCAGGGTCCCTGGTGAGTGGCCACAC--TGAACTCACAGGCCTTCTGTCCTCTCTTCCCTCCCAAGGGTTCTGCTGGGGGTGGATCTGA-CCTCACCCTCCCCGTTCTTGGCTGCA--TGGCCTGGGGTGCCCTTCACAGCCCAGCAAGGGCCAGCCcagggatcggcaactgcggcccgggggccagatcaggcccgacgcctggctctgtatgggatgtgagctaagagtggct i rheMac3.chr16 C 0 I 315 s macFas5.chr16 24499 258 + 80997621 CACTCTCGCTGCTGCAGCCAGGCCCGGTCAGGGTCCCTGGTGAGTGGCCACAC--TGAACTCACAGGCCTTCTGTCCTCTCTTCCCTCCCAAGGGTTCTGCTGGGGGTGGATCTGA-CCTCACCCTCCCCGTTCTTGGCTGCA--TGGCCTGGGGTGCCCTTCACAGCCCAGCAAGGGCCAGCCcagggatcggcaactgcggcccgggggccagatcaggcccgacgcctggctctgtatgggatgtgagctaagagtggct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 36596 261 + 74645514 CACTCTCGCTGCTGCAGCCAGGCCCGGTCAGGGTCCCTGGTGAGTGGCCACACTGTGAACTCACAGGCCTTCTGTCATCTCTTCCCTCCCAAGGGTTCTGCTGGGGGTGGATCTGACCCTCACCCTCCCTGTTCTTGGCTGCA--TGGCCTGGGGTGCCCTTCACAGCCCAGCAAGGGCCAGCCCAGGGATCGGCAACTGCGGCCTGGGGGCCAGATCAGGCCCGACGCCTGGCTCTGTATGGGATGTGAGCTAAGAGTGGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 28873 261 + 75148670 CACTCTCACTGCTGCAGCCAGGCCCGGTCAGGGTCCCTGGTGAGTGGCCACACTGTGAACTCACAGGCCTTCTATCATCGCTTCCCTCCCAAGGGTTCTGCTGGGGGTGGATCTGACCCTCGCCCTCCCTGTTCTTGGCTGCA--TGGCCTGGGGTGCCCTTCACAGCCCTGCAAGGGCCAGCCcagggatcggcaactgcggcgctggtgccagatcaggcccgacgcctggctctgtgtgggatgtgagctaagagtggct i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 842416 259 - 1291538 CACTCCCACTGCCACAGCCGGGCCTGGTCAC-GCCCCCGGTGAGTGGTCACTTGGTGAACACACAGCCTTTCTGTCATCTCTTCCCTCCCAAGGTTTCTGCCGGGGATGAATCTGC-CCTCTCACTCCCTGTTCTTGGCTGCC--TGGTCTGGGGTGACCTTCACAGCCCAGCAAGGGCCAGCAcaggggttggcaactgcagcccaggggccagatcaggtccgatgcctggctctgtgtggaacatgagctgagagtagct i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777257 9 + 122082543 I e canFam3.chr9 15606415 11 - 61074082 I a score=3383408.000000 s hg38.chr17_GL383563v3_alt 96724 1253 + 375691 cttacccttatc-----------------------ttaaacaattTCTTTTTCAAAAAAAtagagacaggggtctcactattttgcccaggctgatctcaaactcctgggctcaagggatcttcccaccttggcctcccaaagtgctgggattacagacatgagccaccgtgcccagctggttcttactttttggaatagcagaaagaaaaatgaaatgaaaaatattttgtgacacatgaaaatgacatgaaattcacacttcagcttccattaacaccgtgttgttggaacgcagccttgccagctccgtgatg-cttctctatggctgcttttgccctaaggacagagctgcatggtggccacagattgcgaggcacacagagcctaacattagcgctaagcggcccttcacgg--gtctgcagcccccGGCCTGGCGCGCTCGGCTTCCGCGGACGGTCTTCCACCAGGTCCT-CCTCACAGCCCGCCCGGACTT---------TCCCTTGGCTTTGAAGCCGGGTCCCACCTCCACACC-TTTGCGCACCCTTAATCCACAGCTCCAGCACCCTCCTCTGACCTCCTCAGTGTTCACCG-TTGATAAATTCCTGGTCCTTCTGGGCCT--------------------------GGGGGGCTTTTCTGACCCTCAG-GGTGGGTTGGCCGTCCCCTCTGCGCGCCCACTGCCTCGGGTT-TATCCTGTCATGGCCTGGTGTGGCCCCCTGCTTCCTCAGGGCTCTGCCCCAGCCTCTAAGTTCCTTGAAGTTGGAACTCTACCTGTAAA------------ttttgatttt--gac---agagtctgactcttgtcacccag-------------gctggagtgcagtggcatgatcttggctcactacaacctctgcctcccgggtttaagcgattctcctgcctcagcct-tctgagtagctgggactaca-------------------gtctaatttttcta-ttttttggtagagacagggttttgccatgtctgccaggctggtctcgaattcctgacctcaagtgatccacccacctcagcctcctgaagtgctgggattacaggtatgagccaccgcatccagATAATACCTGCGTCATCTTTAATACCTCAGGGCTGGGCAAGGCCCTGGCACTAAGGGCCCACTGGAGGC-------------------------------------TTGTACTAGTGAAGGCAGGAATGGAGGGACAGATGGTCCCCTGTGCGTTCAACCTCATACAAGCAACTCCAGCCT-GGAGG--TTCAAAGAAAGGCAGAAAGGTCTGCCCAT-GACAATGGAGCCTGGTGGATGGAAAAGGGTCACCGTGGCCCCAGTTCCCTGAAGGT s panTro4.chr17 89574 1253 + 82630442 cttacccttatt-----------------------ttaaacaatttctttttcaaaaaaatagagacaggggtctcactattttgcccaggctgatctcaaactcctgggctcaagggatcttcccaccttggcctcccaaagtgctgggattacagacatgagccaccgtgcccagctggttcttactttttggaatagcagaaagaaaaatgaaatgaaaaatattttgtgacacatgaaaatgacatgaaattcacacttcagcttccattaacaccatgttgttggaacgcagccttgccggctccgtgatg-cttctctatggctgcttttgccctaaggacagagctgcatggtggccacagattgcgaggcacacagagcctaacattagtgctaagcggcccttcacgg--GTCTGCAGCCCCCGGCCTGGCGCGCTCGGCTTCCGCGGACAGTCTTCCACCAGGTCCT-CCTCACAGCCCGCCCTGACTT---------TCCCTTGGCTTTGAAGCCGGGTCCCACCTCCACACC-TTTGCGCACCCTTAATCCACAGCTCCAGCACCCTCCTCTGACCTCCTCAGTGTTCACCG-TTGATAAATTCCTGGTCCTTCTGGGACT--------------------------ggggggcttttctgaccctcag-ggtgggttggccgtcccctctgcgtgcccactgcctcgggtt-tatcctgtcatggcccggtgtggccgcctgcttcctcaggggtctgccccagcctctaagttccttgaagttggaactctacctgtaaa------------ttttgatttt--gac---agagtctgactcttgtcacccag-------------gctggagtgcagtggcacgatcttggctcactacaacctctgcctcccaggtttaagcgattctcctgcctcagcct-tctgagtagctgggactaca-------------------gtctaatttttgta-ttttttggtagagacagggttttgccatgtctgccaggctggtctcgaattcctgacctcaagtgatccacccacctcagcctcctaaagtgctgggattacaggtatgagccaccgcatccagataatacctgcgtcatctttaatacctcagggctgggcaagggcctggcactaagggcccactggaggc-------------------------------------ttgtactagtgaaggcaggaatGGAGGGACAGATGGTCCCCTGTGCGTTCAACCTCATACAAGCAACTCCAGCCT-GGGGG--TTCAAAGAAAGGCAGAAAGGTCTGCCCGT-GACAATGGAGCCTGGTGGATGGAAAAGGGTCACCGTGGCCCCAGTTCCCTGAAGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3483822 1265 - 17838096 cttgcccttatt-----------------------ttaaacaattTCTTTTTCAAAAAAAtagagacagggttctcactattttgcccaggctgatctcaaactcctgggctcaagggatcttcccaccttggcctcccaaagtgctgggattacagacatgagccaccgtgcccagctggttcttactttttggaatagcagaaagaaaaatgaaatgaaaaatattttgtgacacatgaaaatgatatgaaattcacacttcagcttccgttaacaccctgttattggaacacagccttgccggctccctgatg-cttctctatggctgcttttgccctaatgacagagctgcgtggtggccacagatcacgtggcacacacagcctaacattaatgctaaccggcccttCTCGG--GTCTGCAGCCCCCAGCCTGGCGCGCTCGGCTTCTGCAGATGGTCTTCCGCCAGGTCCC-CCTCACAGCCTGCCCTGACTTTCTCTGCAGTCCCTCGGCTTTGAAGCCGGGTCCCACCTCCATACCTTTTGCGCACGCGTAATCCATAGCTCCAGCACCCTCCTCTGACCTCCTCAGTGTTCACCG-CTGATAAATTCCTGGTCCTTCTGGGCCT--------------------------GGGGAGCTTTTCTGACCCTCAG-GGTGGGTTGGCCAACCCCTCTGTGCGCCCACTGCCTCGGGTT-TATCCTGTCATGGCCGGGTGTGGCCCCCTGCTTCCTCAGGGGTCTGCCCCACCCTTTAAGTTCCTTGAAGTTGGAACCCTACCTGTAAA------------ttttgattttgagac---agagtctcactcttgtcacccag-------------gctggagtgcagtggcacgatcttggctcactacaacctccgcctcccaggtttacgcgattctccttcctcagcctccctgagtagctgggactaca-------------------gtctaa-ctttgta-ttttttggtacagacagggttttgccatgtctgccaggctgttctcaaactcctgacctcaagtgatccacccacctcagcctcctaaagtgctgggattacaggtatgagccaccgcatccagctAATACCTGTGTAATCTTTAATACCTCAGGGCTGGGCAAGG-CCTGGCACTAAGGGCCCACTGGAGGC-------------------------------------TTGTACTAGTGAAGGCAGGAATGGAGGGACAGATGGTCCCCTGTGTGTTCAACCTCATACAGGCAACTCCAGCCTGGGGGG--TTCAAAGAAAGGCAGAAAGGTCTGCCCAT-GCCAATGGAGCCTGGTGGATGGAAAAGAGTCACCCTGTCCCCAGTTCCCTGAAGGT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 54841 1266 - 81552678 cttaccctaatt-----------------------ttaaacaatttctttttcaaaaaaatagagacaggggtctcactatgttgcccaggctgatctcaaactcctgggttcaagggatcttcccacctcggcctcccaaagtgctgggattagagccatgagccaccgtgcccagctggttcttactgtttggaatagcagaaggaaaaatgaaatgaaaaacattttgtgacacatgaaaatgatatgaaattcacacttcagcttccattaataccatgttattggaacacagccttgccggctccctgatg-cttccctatagctgcttttgccctaaggacagagctgcatggcagccacagactgcatggcacacagagcctaacattagtgctaaccggccctccacgg--GTCTGCAGTCCCCGGCCTGGCGCGCTCGGCTTCTGCAGATGGTCTTCCGCCAGGCCCT-CCTCACAGCCTGCCCTGACTTTCTCTGCAGTTCCTGGGCTTTGAAGCCGGGTCCCACCTCCACACC-TTTGCATACGCTGAATCCACAGCTCCAGCACCCTCCTCTGTCCTCCTCAGTGTTCACCG-TTGATAGATTCCTGGTCCTTCTGGGCCT--------------------------AGGGGGCTTTGCTGACCATCCTCGGTGGGTTGGCCGTCCCCTCTGTGCACCCACTGCCTCGGGTT-TATCCGGTCATGGCCCGGTGTGGCCCCCTGCTTCCTCAGGGGTCTGCCCCAGCCTCTAAGTTCCTTGAAGTTGGAACTCTGCCTGTAAA------------ttttgtttttgagac---agagtctcactcttgtcacccag-------------gctggagtgcagtggcacgatcttggctcactacaacctccgcctcccgggtttaagcgattctcctgcctcagcct-cctgaatatctgggactaca-------------------gtctaatttttgta-ttttttggtagagacagggttttgccatgtctgccaggctggtctcgaactcctgacctcaagtgatccacccacctcagcctcctaaagtgctgggattacaggtatgagccaccgcatccagcTAATACCTGAGTCATCTTTAATACCTCAGGGCTGGGCAAGGGCCTGGCACTAGGGGCCCACTGGAGGC-------------------------------------TTGTACTAGTGAAGGCAGGAATGGAGGGACAGATGGTCCCCTGTGCGTTCAACCTCATACAAGCAACTCCAGCCTGGGGGG--TTCAAAGAAAGGCAGAAAGGTCTGCCCAT-GCCAGTGGAGCCTGGTGGATGGAAAAGGGTCACCCTGGCCCCAGTTCCCTGAAGGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 25281 1250 + 80904711 cttacccttttt-----------------------taaaagaaTTTCTTTTTCAAAAAAAGagagac-ggggtctcactatgttgcccaggctgatctcaaactcctgggctcaagggatcctcccaccttggtctcccaaagtgctggggttacaggcgtgagccaccgtgcccagctggttcttacttttcagaatagcagaaagaaaaatgaaatgaaaaatattttgtgacacatgaaaatgatatgaaattcacacttcggtttccattaataacacgttattggaacacagccttgccggctccttgatgccttctctatggctgcttttgctctaaggacagagcagcgtggcggccacagacagcatggtgcacagaccctgacat--gcgctaaccggcccctcacag--CTCTGCAGCCCCCAGCCTGGCGTGCTCGGCCTCCGCAGAGGGTCTTCCGCCAGGTCCT-CCTCACGGCCCGCCCTGACTTTCTCTGGGGTCCCTCGGCTTTGAAGCCGGGTCCCACCTCCACACC-TTTGTGCACGCTTAATCCACAGCTCCAGCACCCTCCTCT----------GTGCTCACCG-TTGATAAATTCCTGGTCCTTCTGGGCCT--------------------------GGGGGGCTTTTCTGACCCTCGG-GGTGGGTTGGCCGTCCCCTGTGTGTGCCCACTGCCTCGGGTT-TATCCTACCATGGCCT-GCGTGACCCCCTGCTTCCTCATGGGTCGGCCCCAACCTCTAAGTTCCTTGAAGTTCGAACTCTGCCTGTACA-------tttttttttttttttgagac---agagtctcactcttgtcacccag-------------actggagcgcagtggcactatcttggctcactacaacctccgcctcccaggtttaagcgattctcctgcctcaacct-cctgagtagctggaactaca-------------------gactaatttttgtgtttttttggtagagacaggattttgccatgtttgccagactggtctcaaactcctgacctcaagtgatccacctgcctcagcctcctaaagtgctgggatgatgggtatgagccactgcatctggcTAATACCTGCATCATCTTTAATACCTCAGGGCTGGGCAAGGGCCTGGCACTAAAGGCCCACTGGAGGC-------------------------------------TTATACTAGAGAAGGCAGGAGTGGAGGGA--------CCCCTGTGTGTTCAACCTCACACAAGCAACTCCAGCCTGGAGGG--TTCAAAGAAAGGCAGAAACGTCTGCCGAT-GCCAACGGAGCCTGGTGGATGGACAAGGGTAACCCTGGCCCCGGTCCCCTGAAGGT i rheMac3.chr16 I 315 C 0 s macFas5.chr16 24757 1253 + 80997621 cttacccttttt-----------------------taaaaaaatttctttttcaaaaaaagagagac-ggggtctcactatgttgcccaggctgatctcaaactcctgggctcaagggatcctcccaccttggtctcccaaagtgctggggttacaggcgtgagccaccgtgcccagctggttcttacttttcagaatagcagaaagaaaaatgaaatgaaaaatattttgtgacacatgaaaatgatatgaaattcacatttcggcttccattaataacacgttattggaacacagccttgccggctccttgatgccttctctatggctgcttttgctctaaggacagagcagcgtggcggccacagacagcatggtgcacagaccctgacat--gcgctaaccggcccctcacag--CTCTGCAGCCCCCAGCCTGGCGTGCTCGGCCTCCGCAGAGGGTCTTCCGCCAGGTCCT-CCTCACGGCCCGCCCTGACTTTCTCTGCGGTCCCTCGGCTTTGAAGCCGGGTCCCACCTCCACACC-TTTGTGCACACTTAATCCACAGCTCCAGCACCCTCCTCT----------GTGCTCACCG-TTGATAAATTCCTGGTCCTTCTGGGCCT--------------------------GGGGGGCTTTTCTGACCCTCGG-GGTGGGTTGGCCGTCCCCTGTGTGTGCCCACTGCCTCGGGTT-TATCCTGCCATGGCCT-GCGTGACCCCCTGCTTCCTCATGGGTCGGCCCCAACCTCTAAGTTCCTTGAAGTTCGAACTCTGCCTGTACA-------tttttttttttttttaaaaccctagagtctcactcttgtcacccag-------------actggagcgcagtggcactatcttggctcactacaacctccgcctcccaggtttaagcgattctcctgcctcaacct-cctgagtagctggaactaca-------------------gtctaatttttgtgtttttttggtagagacaggattttgccatgtttgccagactggtctcaaactcctgacctcaagtgatccacctgcctcagcctcctaaagtgctgggatgatggatatgagccactgcatctggcTAATACCTGCATCATCTTTAATACCTCAGGGCTGGGCAAGGGCCTGGCACTAAAGGCCCACTGGAGGC-------------------------------------TTATACTAGTGAAGGCAGGAGTGGAGGGA--------CCCCTGTGTGTTCAACCTCACACAAGCAACTCCAGCCTGGAGGG--TTCAAAGAAAGGCAGAAACGTCTGCCGAT-GCCAACGGAGCCTGGTGGATGGACAAGGGTAACCCTGGCCCCGGTCCCCTGAAGGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 36857 1288 + 74645514 cttaccctttttaaaaaaaaaattctaaaaaaaaaaaaaaaaatttcgttttcaaaaaaagagagac-agggtctcactatgttgcccaggctgatctcaaactcctgggctcaagggatcctcccacctcggtctcccaaagtgctggggttacaggcgtgagccaccgtgcccagctggtt----CCTTTCAgaatagcagaaagaaaaacgaaacgaaaaatattttgtgacacatgaaaatgatatgaaattcaCACTTCGGCTTCCATTAATAACATGTTACTGGAACACAGCCTTGCCGGCTCCTTGATGCCTtctctatggctgcttttgctctAAGGACAGAGCGGCGTGGCGGCCACCGACAGCGTGGTGCACAGACCCTGACAT--GCGCTAACCGGCCCTTCACAG--CTGTGCAGCCCCCGGCCTGGCGTGCTCGGCCTCCGCAGAGGGTCTTCCGCCAGGTCCT-CCTCACGGCCCACCCTGACTTTCTCTGCGGTCCCTCGGCTTTGAAGCCGGGTCCCACCTCCACACC-TCTGTGCACGCTTAATCCACAGCTCCAGCACCCTCCTCT----------GTGTTCACCG-TTGATAAATTCCTGGTCCTTCTGGGCCT---------------------------GGGGGCTTTTCTGACCCTCGG-GGTGGGTTGGTCGTCCCCTGTGTGTGCCCACTGCCTCGGGTT-TATCCTGCCATGGCCT-GCGTGACCCCCTGCTTCCTCATGGGTCGGCCCCAACCTCTAAGTTCCTTGAAGTTCGAACTCTGcctgtacagtttttttttttttttttttttgagac---agagtctcactcttgtcacccagactggagcgcagtactggagcgcagtggcactatcttggctcactacaacctccgcctcccgggtttaagcgattctgctgcctcaacct-cctgagtagctggaactaca-------------------gtctaatttttgtgtttttttggtagagacaggattttgccacgtttgccagactggtctcgaactcctgacctcaagtgatccacctgcctcagcctcctaaagtgctgggatgatgggtatgagccactgcatctggctaataCCTGCATCATCTTTAATACCTCAGGGCTGGGCAAGGGCCTGGCACTAAAGGCCCACTGGAGGC-------------------------------------TTACACTAGTGAAGGCAGGAATGGAGGGA--------CCCCTGTGTGTTCAACCTCACACAAgcaactccagcctggaggg--TTCAAAGAAAGGCAGAAACGTGTGCCGAT-GCCAACGGAGCCTGGTGGATGGAAAAGGGTAACCCTGGCCCCGGTCCCCTGAAGGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 29134 1240 + 75148670 attacccttttt-----------------------taaaaaaatt--attttcaaaaaaagagagac-ggggtctcactatgttgcccaggctgatctcaaactcctgggctcaagggatcctcccaccttggtctcccaaagtgctagggttacaggcatgagccaccgcgcccagctggtgcttacttttcagaatagcagaaagaaaaacgaaatgaaaaatattttgtgacacatgaaaatgacatgaaattcacacttcggcttccattaataacatgttattggaacacagccttgccggctccttgaggccttctctatggctgcttttgctctaaggacagagcggcgcggcggccacagacagcacggtgcacagaccctgacat--gcgctaacgggcccttcacag--CTCTGCAGTCCCCGGCCTGGCGTGCTCGGCCTCCGCAGATGGTCTTCCGCCAGGTCCT-CCTCACGGCCCGCCCTGACTTTCTCTGCAGTCCCTCGGCTTTGAAGCCGGGTCCCACCTCCGTACC-TCTGTGCACGCTTAATCCACAGCTCCAGCACCCTCCTCC----------GTGTTCACCG-TTGATAAATTCCTGGTCCTTCTGGGCCT--------------------------GGGGGGCTTTTCTGACCCTCGG-GGTGGGTTGGCCGTCCCCTCTGTGTGCCCACTGCCTCGGGTT-TATCCTGCCATGGCCT-GCGTGACCCCCTGCTTCCTCATGGGTCTGCCCCAACCTCTAAGTTCCTT-AAGTTTGA----------------------------------------------------ACTCTtgtcacccag-------------actggagtgcagtggcactttcttggctcactacaacctccgcctcccgggtttaagcgattctcctgcctcaacct-cctgagtagctggaactaca-------------------gtctaatttttg---ttttttggtagagtcaggattttgccatgtttgccaggctggtctcgaactcccgacctcaagtgatccacctgtctcagcctcctaaagtgctgggatgatgggtatgagccactgcatctggcTAATACCTGCATCATCTTTAATACCTCAGGGCTGGGCAAGGGCCTGGCACTAAAGGCCCACTGGAGGCTTATACTAGTGAAGGCAAGAATGGAGGGACTGGAGGCTTATACTAGTGAAGGCAGGAGTGGAGGGA--------CCCCTGTGTGTTCAACCTCACACAAGCAACTCCAGCCTGGAGGG--TTCGAACAAAGGCAGAAACGTCTGCCCATGGCCAACAGAGCCTGGTGGATGGAAAAGGGTAACCCTGGCCCCGGTCCCCTGAAGGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 842675 1290 - 1291538 cttacactt-tt-----------------------taaaaaaattgtttaaaaaacaaAAtagagactggag--tcacaatgttgcccaagctgatctcaaactcctgggctcaagagatcctcctaccttggccttccaaagtgctgggattacaggtgtgagccaccgtgcccagctggttcttacttttttgagtagcagaaagaa-----aaatgaaaagtattttgtggcacatgaaaatgatatgaaattcacacttcagctcccattgataatatgttattacaacacagccttgccagctccttgacgccttctctatggctgcctttgctctaaggacagagctgcatggtgactacacaccacgtggcacacagggcctgacatatgcgtgaactggcccttcacagCAGTCTGCAGTGCTGAGCCTGGCGCCCTTGGCTTCCACAGATGGTTTTCTGcctcgtcctacctcacagcctg-cctgactttctctatagtcccaaggctttgaagccgggtcccacctccatgcc-tctgcacatgctgtatccacagctcgaacaccctcctct----------gtgttcactgcttgataaattcctggtcc-tctgggcctaagctcagtgcaagtggcaccagactgggaggcgtttctgaccctcag-ggtgggctgcctgtcccctcggtgatcccactgcctcggcttctgtcctgtct-------gggtggtcccctgcttcttcataggtctgtcccagcctctaaattccttgaagttggaactctgcctgtaac-------------ttcttttttgagac---gaagacttgctcttgtcacccag-------------gctagagtgcagtggcacaatcttggcttactacaacctctgtctcccaggttcaagcgattctccttcctcagcct-cctgagcagctgggactacaggcatgtaccaccatacccgcctaatttttgta-ttttttggcagagatggggctttgccatttttaccaagctggtctcgaactcctgacctcaaatgatgcacatgcttcagcctcccaaagtgctgggattacagttatgagccatcatgtctggctaatacctgtatcatctttaatacctcagggccgggcaacagcctggcactaagtgcccactggaggc-------------------------------------ttgtcctagtgaaggcaggaatGGAGGGACAGGTGGTACCCTATGGGTTCAACCTCATGCAACCAACTCCAGCCTGGGGGGGTTTCAAAGAAAGGCAGAAAGGTCTGCCCAT-GCCAATGGAGCCTGGTGGATGGAAAAAGGTCGTCCTAGCCCCAGTCCCCCAAAGAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777257 9 + 122082543 I e canFam3.chr9 15606415 11 - 61074082 I a score=845914.000000 s hg38.chr17_GL383563v3_alt 97977 320 + 375691 GCTACCTGGAGCCTCTCAGGGTGCTGGATGTGGCTCCCTCA-GGAGAACCCCGAAGACAGAGTTCTGGTACATTCCTCACCCT-GGAGAAGCTGGGAGCCAAGTAGGGAGCCCATCCAGTGCCTT-CCCTGCCTCAGCAGCTG-CCAGTGCCTGCCTCTCAAGGCAGATCTCAGCTCCAGG-----------------CCTCCCCATCCCCAGCCAGCCTGATGCTTCTCCATTCCTTGCCCTCCCGAGACTACCCGGCTTCTTCCTTCTGGCTGCTGCACACCCCAAAC-CCTCTCTCCTAGGCCCTCAGCCCCCCCAGACAAACCCAGCTTGAGCCCACC s panTro4.chr17 90827 320 + 82630442 GCTACCTGGAGCCTCTCAGGGTGCTGGATGTGGCTCCCTCA-GGAGAACCCCGAAGACAGAGTTCTGGTATATTCCTCACCCT-GGAGAAGCTGGGAGCCAAGTAGGGAGCCCATCCAGTGCCTT-CCCTGCCTCAGCAGCTG-CCAGTGCCTGCCTCTCAAGGCAGATCTCAGCTCCAGG-----------------CCTCCCCATCCCCAGCCAGCCTGATGCTTCTCCATTCCTTGCCCTCCCGAGACTACCCGGCTTCTTCCTTCTGGCTGCTGCACACCCCAAAC-CCTCTCTCCTAGGCCctcagcccacccagacatacccagcttgagcccacc i panTro4.chr17 C 0 I 324 s ponAbe2.chr17_random 3485087 322 - 17838096 GCTACCTGGAGCCTCTCAGGGTGCTGGATGTGGCTCCCTCA-GGAGAACCCCGAAGACAGAGTTCTGGTACATTTCTCACCCT-GGAGAAGCTGGGAGCCAGGTAGGGAGCCCATCCAGTACCTTCCCCTGCCTCAGCAGCTGCCCGGTGCCTGCGTCTCAGGGTAGATCTCAGCTCCAGG-----------------CCTCCCCATCCCCAGCCAGCCTGATGCTTCTCCATTCCTTGCCCTCCAGAGACTACCCAGCTTCTTCCTTCTGGCTGCTGCACACCCCAAAC-CCTCTCTCCTAGGCCCTCAGCCCACCCAGACATACCCAGCTTAAGGCCACC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 56107 305 - 81552678 GCTTCCTGGGGCCTCTCAGGGTGCTGGATGTGGCTCCCTCA-GGAGAACCCTGATGACAGAGTTCTGGTACGTTCCTTACCCT-GGAGAAGCTGGGAGTCAGGTAGGGAGCCCATCCAGTCCCTTCCCCTGCCTCAGCAGCTGCCCGGTGCCTGCCCCTCAGGGCAGATCTCAGCTCCAGG-----------------CCTCCCCATCCCCAGCCAGCCTGATGCTTCTCCATTCCTTGCCCTCCCGAGACTACCCAGCTTCTTCCTTCTGGCTGCTGCACACCCCAAAC-CCTCTCTCCTAGGCCCTCAGCCCACCCAGATGTA----------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 26531 295 + 80904711 GCTTCCTGGAGCCTCTGAGGGTGCTGGACGCGGCTCCCTCA-GGAGAGCCCAGGAGACAGAGCTCTGGTACTTTCCTCACCCT-GGGGAAGCTGGGAGCCTGGTGGGGAGGCCACTCAGTCCCCTCCCCTGCCTCAGCAGCTGCCCGGTGCCTGCCTCTCAGGGCAGATCTCAGTTCCAGG-----------------CCTCCCCATCCCCAGCCAGACTGAGGCTTCTCCATTCCTTGACCTCCCAAGGCCACCTGACCTCTTCCTTCCGGCTGCTGTGCA-CCCAAAC-CCTCTCTCCGGGG-CCTCAGCCCAGC------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26010 295 + 80997621 GCTTCCTGGAGCCTCTGAGGGTGCTGGACGCGGCTCCCTCA-GGAGAGCCCAGGAGACAGAGCTCTGGTACTTTCCTCACCCT-GGGGAAGCTGGGAGCCTGGTGGGGAGGCCACTCAGTCCCCTCCCCTGCCTCAGCAGCTGCCCGGTGCCTGCCTCTCAGGGCAGATCTCAGTTCCAGG-----------------CCTCCCCATCCCCAGCCAGACTGAGGCTTCTCCATTCCTTGACCTCCCAAGGCCACCTGACCTCTTCCTTCCGGCTGCTGTGCA-CCCAAAC-CCTCTCTCCGGGG-CCTCAGCCCAGC------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38145 295 + 74645514 GCTTCCTGGAGCCTCTGAGGGTGCTGGAGGCGGCTCCCTCA-GgagaacccaagagacagagctCTGGTACTTTCCTCACCCT-GGGGAAGCTGGGAGCCCGGTGGGGAGGCCACTCAgtcccctcccctgcctcagcagCTGCCCGGTGCCTGCCTCTCAGGGCAGATCTCAGTTCCAGG-----------------CCTCCCCATCTCCAGCCAGACTGAGGCTTCTCCattccttgacctcccaagacCACCTGGCCTCTTCCTTCCAGCTGCTGCGCA-CCCAAAC-TCTCTCTCCGGGG-CCTCGGCCCAGC------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30374 295 + 75148670 GCTTCCTGGAGCCTCTCAGGGTACTGGAGGCGGCTCCCTCA-GGAGAGCCCAGGAGACAGAGCTCTGGTACTTTCCTCACCCT-GGGGAAGCTGGGAGCCCAGTGGGGAGGCCACTCAGTCCCCTCCCCTGCCTCAGCAGCTGCCCGGTGCCTGCCTCTCAGGGCAGATCTCAGTTCCAGG-----------------CCTCCCCATCCCCAGCCAGACTGAGGCTTCTCCATTCCTTGACCTCCCGAGACCACCTGGCCTCTTCCTTCCGGCTGCTGTGCA-CCCGAAC-CCTCTCTCCTAGG-CCTCAGCCCAGC------------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 843965 283 - 1291538 ----------GCCTCTCAGGGAGCTGGACGTGGCTCACTCA-GCAGAACCCAGAAGACAGAGCTCTGGTACATTCCTC-CCCT-GGGAAAGCTGAGAGCCAGCTGGGGAGGCCATTCAGTGCTGT-----ACCCCAGCAGCTGCCTGGTGCCT-CCTCTTGGGGCAGATCTCACTTCCAGG-----------------CCTCCCCATCCCCAGCCAGCCTGATGCTTCTCCACTCCTTGCCCTCCCCAGACCACCCGGCCTCTTCCTTTTGGCTGCTACACACCCCAAAC-TCCTTCTCCTAGGCCCTGAGCCAAACAAG---------------------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15606426 325 - 61074082 GCTGTCTGCTGGCCCAGGGGATGTAGGGGATAGCCCCCTTGTGGAGAACCCAGAAGTCAGAGCTTTGACATATTCCCAACCCCAAGGGGAGCAGGGAGGCA--CGGAGGGGCTGTCTGGGTCTCTCTCATGCTCCAGCGGCTACCCAGGGCTCTCCTCAGGGGTCAGACCTCAGCTATAGGCGTGGTGTCCCAGTCTACCTCCCTGTC-CCAATTAGCCTGAGAGTT-TCCATTCCCTATCCTTCTGAGACCAC----TTTCCACCGTCTGGCTCCTGCTCTTCTGGAACTCCTCCCTAC-----CCTCTGTCTACCCGGACATA-CCAGTTAGAGCCC--- i canFam3.chr9 I 11 C 0 e mm10.chr11 75777257 9 + 122082543 I a score=76418.000000 s hg38.chr17_GL383563v3_alt 98297 37 + 375691 CACACACGCCCAGCTTGAGCCCTGTGTCCCCCTGGAT s panTro4.chr17 91471 37 + 82630442 CAGACACGCCCAGCTTGAGCCCTGTGTCCCCCTGGAT i panTro4.chr17 I 324 C 0 s ponAbe2.chr17_random 3485409 37 - 17838096 CAGACACACCCAGCTTGAGCCCTGTGTCCCCCTGGAT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 56412 29 - 81552678 --------CCCAGCTTGAGCCCTGTGTCCCCCCGGAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 26826 37 + 80904711 CGGACACACCCAGCTTGAGCCCTGTGTCCCCCTGGGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26305 37 + 80997621 CGGACACACCCAGCTTGAGCCCTGTGTCCCCCTGGGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38440 37 + 74645514 CGGACATACCCAGCTTGAGCCCTGTGTCCCCCTGGGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30669 37 + 75148670 CGCACATGCCCAGCTTGGGCCCTGCGTCCCCCTGGGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844248 23 - 1291538 -AAACA---CCAGCTTGAACCCT----------GGGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15606751 9 - 61074082 -------------CCAGGGCTC--------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75777257 9 + 122082543 I a score=113163.000000 s hg38.chr17_GL383563v3_alt 98334 30 + 375691 CCCCTTAGGA--CTCTACCAGGCTCCTCTCCC s panTro4.chr17 91508 30 + 82630442 CCCCTTAGGA--CTCTACCAGGCTCCTCTCCT i panTro4.chr17 C 0 I 129 s ponAbe2.chr17_random 3485446 30 - 17838096 CCCCTTAGGA--CTCTACCGGGATCCTCTCCT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 56441 30 - 81552678 CCCCTCAGGA--CTCTACCGGGCTCCTCTCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 26863 30 + 80904711 CCCCTTCGGA--CTCTGCCAGGCTCCTCTCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26342 30 + 80997621 CCCCTTCGGA--CTCTGCCAGGCTCCTCTCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38477 30 + 74645514 CCCCTTAGGA--CTCTGCTGGGCTCCTCTCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30706 30 + 75148670 CCCCTTAGGA--CTCTGCCGGGCTCCCCTCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844271 30 - 1291538 CCCCTTAGGA--CTCCACAAGGCTCCTCTCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777266 30 + 122082543 CTCCTCGGGG--TTCTGCTAGACCCCTCTTTG i mm10.chr11 I 9 C 0 s canFam3.chr9 15606760 32 - 61074082 CTCCTTAGGCCTCTCTGCTAGGCTCCTCTCAC i canFam3.chr9 C 0 C 0 a score=57111.000000 s hg38.chr17_GL383563v3_alt 98364 17 + 375691 AAGCAGCCCCAGCCACC s panTro4.chr17 91667 17 + 82630442 AAGCAGCCCCAGCCACC i panTro4.chr17 I 129 C 0 s ponAbe2.chr17_random 3485476 17 - 17838096 AAGCAGCCCCAGCCACC i ponAbe2.chr17_random C 0 I 129 s nomLeu3.chr19 56471 17 - 81552678 AAGCAGCCCCAGCCACC i nomLeu3.chr19 C 0 I 129 s rheMac3.chr16 26893 17 + 80904711 GAGCAGGCCCAGCCACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26372 17 + 80997621 AAGCAGGCCCAGCCACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38507 17 + 74645514 AAGCAGGCCCAGCCACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30736 17 + 75148670 AAGCAGGCCCAGCCACA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844301 17 - 1291538 AAGCAGCCCCAGCCACA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777296 12 + 122082543 --ACAGCCTGAGCC--- i mm10.chr11 C 0 C 0 s canFam3.chr9 15606792 16 - 61074082 -TGAAGTCCCAGCCACA i canFam3.chr9 C 0 C 0 a score=856514.000000 s hg38.chr17_GL383563v3_alt 98381 261 + 375691 TCCTTTTGCCCACAACCGTGCCCTGCCTAACACCAAAGTGAGTCCC--TCTG-------------------GCTACATCT--AACCCTTTCTGGAGATGAGACTCCTGTGAGGTGAGCAGGGATGTTGAGcagggaagacatacatg-ccccaccagccaccttcgccacctcccacgcccagagcagacatggctaatcgatcctagcatttgccctaggctccaatgccacctcagaatccttttcaacacagtgctcaggcagccattcctggtggatcagg s panTro4.chr17 91684 261 + 82630442 TCCTTTTGCCCACAACCGTGCCTTGCCTAACACCAAAGTGAGTCCC--TCTG-------------------GCTACATCT--AACCCTTTCTGGAGAAGAGACTCCTGTGAGGTGAGCAGGGATGTTGAGcagggaagacatacatg-ccccaccagccaccttcgccacctcccacgcccagagcagacatggctaatcgatcctagcatttgccctgggctccaatgccacctcagaatccttttcaacacagtgctcaggcagccattcctggtggatcagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3485622 261 - 17838096 TCCTTTTGCTCACAACCGTGCCCTGCCTAACACCAAAGTGAGTCCC--TCTG-------------------GCTACATCT--AACCCTTTCTGGAGATGAGACTCCTGTGAGGTGGGCAGGGATGTTGAGcagggaagacatacatg-ccctaccggccatcttcgccacctcccacgcccagagcagacatggctaatccatcctagcatttgccctgagctccaatgccacctcagaacccttttcaacacagtgctcaggcagccattcctggtggatcaAG i ponAbe2.chr17_random I 129 C 0 s nomLeu3.chr19 56617 261 - 81552678 TCCTTTTGCTCACAACCGTGCCCTGCCTAACACCAAAGTGAGTCCC--TCTG-------------------GCTACATCT--AACCCTTTCTGGAGCTGAGACTCCTGTGAGGTAAGCAGGGATGTCGAGCAGGGAAGACATACATG-CCCGACTAGCCATCTTCGccacctcccacgcccagagcagacatggctaatcgatcctagcgtttgccctgagctccaatgccccctcagaatccttttcgacacagtgctcaggcagccattcctggtgcatcagg i nomLeu3.chr19 I 129 C 0 s rheMac3.chr16 26910 258 + 80904711 CCCTTTTACTCACAACTGTGCCCTGCCTAGCACC-AAGTGAGTCCC--TCTG-------------------GCTACATCC--AACCCTTTCTGGAGACAAGAGTCCTGTGAGGTGAGCAGGGATGTTGAGcagggaggacacacacg-ccccaccggccaccttcaccacctcccacgcccagagcaggcatggctaatcgatctcagcgtttgccctgagctccaacgccccctcagagtccttttca--acagtgcccaggcagccgttcccagtggatcagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26389 258 + 80997621 CCCTTTTACTCACAACTGTGCCCTGCCTAGCACC-AAGTGAGTCCC--TCTG-------------------GCTACACCC--AACCCTTTCTGGAGACGAGAGTCCTGTGAGGTGAGCAGGGATGTTGAGcagggaggacacacacg-ccccaccggccaccttcaccacctcccacgcccagagcaggcacggctaatcgatctcagcgtttgccctgagctccaacgccccctcagagtccttttca--acagtgcccaggcagccgttcccagtggatcggg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38524 258 + 74645514 CCCTTTTACTCACAACTGTGCCCTGCCTAGCACC-AAGTGAGTCCC--TCTG-------------------GCTACATCC--AACCCTTTCTGGAGATGAGAGTCCTGTGAGGTGAGCAGGGATGTCGAGCAGGGAGGACACACACG-CCCCACCGGCCACCTTCACCACCTCCCACGCCCAGAGCAGGCATGGCTAATCGATCTCAGCATTTGCCCTGAGCTCCAATGCCCCCTCAGAGTCCTTTTCA--ACAGTGCCCAGGCAGCCGTTCCCAGTGGATCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30753 258 + 75148670 CCCTTTTACTCACAACGGTGCCCTGCCTAGCACC-AAGTGAGTGCC--TCTG-------------------GCTACATCC--AGCCCGTTCTGGAGATGAGAGTCCTGTGAGGTGAGCAGGGATGTCGAGcagggaggacacacacg-ccccaccggccaccttcaccacctcccacgcccagagcaggcatggctaatcgatctcagcgtttgccctgagctccaatgccccctcagagtccttttca--acagcgcccaggcagccgttcccagtggatcagg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844318 261 - 1291538 TCCTGTTGCTCACAACTGTGCCCTGCCTGGTACC-AAGTAAGTCCC--TCTGT-----------------AGCTACATCT--AACCTTTTCTGGAGTTGAGACTCCTGTGAGGTGAGCAGGGATGTCTAGcagggaggacacacatgtccccaaggaccaccttccccacctcccaagcccacagtagacatggctaatctatcccagcatttactctgagctccaatgccacctcagaatccttctca--acagtgctcgggcagccgttcccaatggatcagg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777308 244 + 122082543 ----TTTGCTTGCAACTGTGCTCTGCTTGGGACTGACCTGAGTCCCCATGTG-------------------GTCATGTCCAAAAACCTTCCTGGAGATGGGAGTCCTGAGAGGTGAGGAAGG---------------GATGCCTGTT-ACCCACAGGCC--TTTCTCCAAGGTTCATGCGCAGAGTAGACATGGCTAATTGATCCCAGCACTCACCCTGAATTCAAATACAACCTTGGCATCCTTCTAAACCCAATACTCAGTCAGTCATGATCAGTGGTACAGG i mm10.chr11 C 0 I 60 s canFam3.chr9 15606808 240 - 61074082 TCCCTTTGTCCACGATGGTCTGCTGGTTGTCCCTAAAGTGATGCCC--CATGTGGATCCTCATAGGCAGGGGCCCTGCCT--ACACCTCTCTGGAGATGGG-CTCCTATGAGGTGAA-------------------------GTAAG--------Agccaccttccccaactcccactcccagagcagagatgactaattgatcactgcacttactctgagctcatatgaagcctcagcacc--tttca--gtgctgactgggcagccacaattaacggaga--- i canFam3.chr9 C 0 C 0 a score=162870.000000 s hg38.chr17_GL383563v3_alt 98642 59 + 375691 ccaggcctgcgagatCTCGCTATCTGCCGCTCAGGC--AGAGCTTTGTGTGTGAGGGCCTT s panTro4.chr17 91945 59 + 82630442 ccaggcctgcgagatCTCGCTATCTGCCGCTCAGGC--AGAGCTTTGTGTGTGAGGGCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3485883 59 - 17838096 CCAGGCCTGCGAGATCTCGCTATCTGCCCCTCAGGC--AGAGCTTTGTGTGTGAGGGCCTC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 56878 39 - 81552678 ccaggcctgcgagatCTCGCTATCTGCCCCTGA----------------------GGCCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 27168 58 + 80904711 gcaggcctgtgagatCTCGCCATCTGCCCCTCAGGC--AGAGCTCTGTGTGTGA-GGCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26647 58 + 80997621 gcaggcctgtgagatCTCGCCATCTGCCCCTCAGGC--AGAGCTTTGTGTGTGA-GGCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38782 57 + 74645514 GCAGGCCTGCGAGATCTCGCCATCTG-CCCTCAGGC--AGAGCTTTGTGTGTGA-GGCCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31011 58 + 75148670 ccaggcctgcgagatCTCGCCATCTGCCCCTCAGGC--AGAGCTTTGTGTGTGA-GGCCTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844579 59 - 1291538 ccaggcccacaagatctcactatttgccCCTCAGGT--TGAGCTTTCTGTGTGAGGGCCTC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15607048 61 - 61074082 ctaagcctgcgagatttacctatctgccactctgGCCTAGGGCTCTGTGCAGGATGGCCTC i canFam3.chr9 C 0 I 13 e mm10.chr11 75777552 60 + 122082543 I a score=38477.000000 s hg38.chr17_GL383563v3_alt 98701 14 + 375691 GATGCCCTGTGCTG s panTro4.chr17 92004 14 + 82630442 GATGCCCTGTGCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3485942 14 - 17838096 GATGCACTGTGCTG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 56917 14 - 81552678 GATGCACTGTGCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 27226 14 + 80904711 GAGGCACTGTGCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26705 14 + 80997621 GAGGCACTGTGCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38839 14 + 74645514 GAGGCACTGTGCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31069 14 + 75148670 GAGGCACTGTGCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844638 14 - 1291538 AATGCACCATGCTG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777552 60 + 122082543 I e canFam3.chr9 15607109 13 - 61074082 I a score=23803.000000 s hg38.chr17_GL383563v3_alt 98715 7 + 375691 CTTGTGT s panTro4.chr17 92018 7 + 82630442 CTTGTGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3485956 7 - 17838096 CTTGTGT i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 56931 7 - 81552678 CTTGTGT i nomLeu3.chr19 C 0 M 14910 s rheMac3.chr16 27240 7 + 80904711 CCTGTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26719 7 + 80997621 CCTGTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38853 7 + 74645514 CCTGTGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31083 7 + 75148670 CCTGTGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844652 7 - 1291538 CTTATGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15607122 7 - 61074082 CTTATGC i canFam3.chr9 I 13 C 0 e mm10.chr11 75777552 60 + 122082543 I a score=78954.000000 s hg38.chr17_GL383563v3_alt 98722 29 + 375691 CAGTGTGTGTG--GTGTGAAAATTAAACAAT s panTro4.chr17 92025 29 + 82630442 CAGTGTGTGTG--GTGTGAAAATTAAACAAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3485963 29 - 17838096 CAGTGTGTGTG--GTGTGAAAATTAAACAAT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27247 29 + 80904711 CAGTGTGTGTG--GTGTGAAAATTAGACAAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 26726 29 + 80997621 CAGTGTGTGTG--GTGTGAAAATTAGACAAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38860 29 + 74645514 CAGTGTGTATG--GTGTGAAAATTAGACAAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31090 29 + 75148670 CAGTGTGTGTG--GTGTGAAAATTAGACAAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844659 25 - 1291538 CAGTGTGTGTG--ATGTGAAAATT----AAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15607129 31 - 61074082 TAGTTTGTGAGATGTGTGAAAATTAAACAAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75777552 60 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=591325.000000 s hg38.chr17_GL383563v3_alt 98751 274 + 375691 ATAAACCAGCAGGggccaggcacagtgactcatgcctgtaaccccagcactttgggaggccaaggcgggcagatcacctg--ag--------gtcagcagctcaggaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggcgcatgcctgtaatcccagcta-ttgggaggctgaggcagaagaatcacttgaacccgggaggcggaggttgaagtaagccgacattgcgccactgcactccagcctgggcg s panTro4.chr17 92054 274 + 82630442 ATAAACCAGCAGGggccaggcacagtggctcacgcctgtaaccccagcactttgggaggccaaggcgggcagatcacctg--ag--------gtcagcagctcaggaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtggtgggcccctgtaatcccagcta-ttgggaggctgaggcagaagaatcacttgaacccgggaggcggaggttgaagtaagccgacattgcgccactgcactccagcctgggcg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3485992 284 - 17838096 ATAAACCAGCAGGggccgggcacagtggctcacgcctgtaaccccagcactttgggaggccgaggcgggcagatcacccgccaggatcatccgtcaggagttcaggaccagccaggccaacatggtgaaaccttgtctctactaaaaatacaaaaattagctgggtgtggtggcatgcacctctaatcccagcta-ttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgacgtaagccgagattgcaccactgcactccagcctgggcg i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27276 272 + 80904711 ATAAACCAGCAGGggccgggcacagcggctcacacctgtaaccccagcactttgggaggccgaagcgggcagatcacctg--ag--------gtcaggagttcaggaccagcccgaccaacatggggaaac--cgtctctactaaaaacacaaaaattagccgggcgtggtggcaggagactttcatcccagcta-ttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgaagggagctgagatcgcgccactgcattccagcctgggcg i rheMac3.chr16 C 0 I 69 s macFas5.chr16 26755 272 + 80997621 ATAAACCAGCAGGggccgggcacagcggctcacacctgtaaccccagcactttgggaggccgaagcgggcagatcacctg--ag--------gtcaggagttcaggaccagcccgaccaacatggggaaac--cgtctctactaaaaacacaaaaattagccgggcgtggtggcaggagactgtcatcccagcta-ttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgaagggagctgagatcgcgccactgcattccagcctgggcg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 38889 274 + 74645514 ATAAACCAGCAGGggccgggcacagcagctcacacctgtaaccccagcactttgggaggctgaggcgggcagatcacctg--ag--------gtcaggagttcaggaccagcctggccaacatagtgaaacttcgtctctactaaaaacacaaaaattagccgggtgtggtggcaggagactgtcatcccagcta-ttgggaggctgaggcaggagaatcacttgaacccagcaggcggaagtcaaagggagccgagatcgcaccactgcactccagcctgggcg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31119 274 + 75148670 ATAAACCAGCAGGCgccaggcacagcggctcacgcctgtaaccccagcactttgggaggccgaggcgggcagatcacctg--ag--------gtcgggagttcaggaccagcctggccaacatagtgaaacttcgtctctactaaaaacacaaaaatcagccgggcgtggtggcaggcgcctgtagtcccagcta-ttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgaagggagccgagatcgcgctactgcactccagcctgggca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844684 273 - 1291538 ATAAACCAGCAGGggccaggcgtggtggtgcatgtctgtaaccccagtactctggaaggctgaggcaggtggatcacctg--ag--------gtcaagtgttcaagaccaccctggtcaacatgatgaaacaccgtccctactaaaa--acaaaaattagtgaggcatggtggcaggtgcctgtaatcccagcaacttgggaggctgaagcgggagaatcacttgaacccgggaaacagaggttaccatgagctgagatcatgccactgcactccagcctgggca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777552 60 + 122082543 I e canFam3.chr9 15607160 0 - 61074082 C e nomLeu3.chr19 56938 14910 - 81552678 M a score=4638.000000 s hg38.chr17_GL383563v3_alt 99025 3 + 375691 aca s panTro4.chr17 92328 3 + 82630442 aca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486276 3 - 17838096 aca i ponAbe2.chr17_random C 0 C 0 s macFas5.chr16 27027 3 + 80997621 aca i macFas5.chr16 C 0 I 4 s papAnu2.chr16 39163 3 + 74645514 aca i papAnu2.chr16 C 0 I 4 s chlSab2.chr16 31393 3 + 75148670 aca i chlSab2.chr16 C 0 I 92 s calJac3.chrUn_GL286409 844957 3 - 1291538 aaa i calJac3.chrUn_GL286409 C 0 I 6 e mm10.chr11 75777552 60 + 122082543 I e canFam3.chr9 15607160 0 - 61074082 C e rheMac3.chr16 27548 69 + 80904711 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=10720.000000 s hg38.chr17_GL383563v3_alt 99028 28 + 375691 tagactccatctcataaaaaaaaaaaaa s panTro4.chr17 92331 28 + 82630442 tagactccatctcataaaaaaaaaaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486279 28 - 17838096 gagactccatctcaaaaaaaacaaaaaa i ponAbe2.chr17_random C 0 C 0 s macFas5.chr16 27034 13 + 80997621 gagaccccaactc--------------- i macFas5.chr16 I 4 C 0 s papAnu2.chr16 39170 13 + 74645514 gagaccccaactc--------------- i papAnu2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 844966 27 - 1291538 aagactccatctcaaacaaaataaaac- i calJac3.chrUn_GL286409 I 6 C 0 e mm10.chr11 75777552 60 + 122082543 I e canFam3.chr9 15607160 0 - 61074082 C e chlSab2.chr16 31396 92 + 75148670 I e rheMac3.chr16 27548 69 + 80904711 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=3972.000000 s hg38.chr17_GL383563v3_alt 99056 6 + 375691 aaaac---------a s panTro4.chr17 92359 6 + 82630442 aaaac---------a i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486307 15 - 17838096 caaacaaacaaaaaa i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27617 6 + 80904711 AAAAC---------C i rheMac3.chr16 I 69 C 0 s macFas5.chr16 27047 6 + 80997621 aaaaC---------C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39183 6 + 74645514 aaaac---------c i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 844993 6 - 1291538 aaaac---------a i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777552 60 + 122082543 I e canFam3.chr9 15607160 0 - 61074082 C e chlSab2.chr16 31396 92 + 75148670 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=5229.000000 s hg38.chr17_GL383563v3_alt 99062 4 + 375691 aCCA s panTro4.chr17 92365 4 + 82630442 aCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486322 4 - 17838096 ACCA i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27623 4 + 80904711 ACCA i rheMac3.chr16 C 0 I 2 s macFas5.chr16 27053 4 + 80997621 ACCA i macFas5.chr16 C 0 I 2 s papAnu2.chr16 39189 4 + 74645514 acca i papAnu2.chr16 C 0 I 2 s calJac3.chrUn_GL286409 844999 1 - 1291538 a--- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15607160 4 - 61074082 ACCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75777552 60 + 122082543 I e chlSab2.chr16 31396 92 + 75148670 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=51352.000000 s hg38.chr17_GL383563v3_alt 99066 37 + 375691 ACCAG---------------------CAGGCATATTTTTAGCTCTTTTTTCAGGGGTG s panTro4.chr17 92369 37 + 82630442 ACCAG---------------------CAGGCATATTTTTAGCTCTTTTTTCAGGGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486326 37 - 17838096 ACCAG---------------------CAGGCATATTTTTAGCTCTTTTTTCAGGGGTG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27629 57 + 80904711 AGCAGGGACATCTTTCGCTGTTTTTTCAGGGATAT-TTTCCCTGTTTTTTCAGGGCTG i rheMac3.chr16 I 2 C 0 s macFas5.chr16 27059 57 + 80997621 AGCAGGGACATCTTTCGCTGTTTTTTCAGGGATAT-TTTCCCTGTTTTTTCAGGGCTG i macFas5.chr16 I 2 C 0 s papAnu2.chr16 39195 46 + 74645514 accaccagca------gcag------cagggatATCTTTCGCTGGTTTTTCAGGGCTG i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 31488 56 + 75148670 accaGGGATATCTTTCGCTGTTTTTTCA--GATATTTTTCGCTGTTTTTTCAGGGCTA i chlSab2.chr16 I 92 C 0 s calJac3.chrUn_GL286409 845000 37 - 1291538 aaTAG---------------------CAGGGATATTTTCAGCTGTTTTTTCAGGGGTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15607164 36 - 61074082 GTGAG---------------------CAGGAATATTTGCAGCTG-TCTTTCTGGGGTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75777552 60 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=236301.000000 s hg38.chr17_GL383563v3_alt 99103 97 + 375691 GGACATT---GTACTTCGGGTTGTTTCATATGAAGACCACTGGGTCTTGCTCAGTATTGACTTAAAACAGATAATGTTCGCAGAC--TGTAAATTCTAAAAC s panTro4.chr17 92406 96 + 82630442 GGACATT---GTACTTCGGGTTGTTTCATATGAAG-CCACTGGGTCTTGCTCAGTATTGACTTAAAACGGATAATGTTCGCAGAC--TGTAAATTCTAAAAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486363 97 - 17838096 GGATATT---GTACTTCAGGTTGTTTCATATGAAGACCACTGGGTCTTGCTCAGTATTGACTTAAAACAGATAATGTTCGCAGAC--TGTAAATTCTAAAAC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27686 96 + 80904711 GGATATT---GTGCTTTGGGTTGTTTCATATGAAGACCATTGGGTATTGCTCAGTATTGACTTAAAACAGACAATGTTCGCAGAC--TGTAGATTCT-AAAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27116 96 + 80997621 GGATATT---GTGCTTTGGGTTGTTTCATATGAAGACCATTGGGTATTGCTCAGTATTAACTTAAAACAGACAATGTTCGCAGAC--TGTAGATTCT-AAAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39241 96 + 74645514 GGATATT---GTGCTTTGGGTTGTTTCATATGAAGACCATTGGGTATTGCTCAGTATTGATTTAAAACAGACAATGTTCACAGAC--TGTAAATTCT-AAAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31544 92 + 75148670 GGATATT---GTGCTTTGGGTTGTTTCATATGAAGACCATTGTGTATTACTCAGTATTGACTTAAA----ACAATGTTCGCAGAC--TGTAAATTCT-AAAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845037 95 - 1291538 GGATATG---GTATTTTGGGTTGTTTCATAAGAAGACCATTGGGTATGAGTCAGTATTGACTTAAAAGAGATAATGTT--CAGAC--TGTAAAATCTAAAAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777612 95 + 122082543 GGACACTACCATACTCTGGACTGTTTCACGTGACAGCCATTAAGCCAT-----GTATTTACTTAGAACAAGTAAATATAATAGAG--TATAAAATCTAAAAC i mm10.chr11 I 60 I 288 s canFam3.chr9 15607200 83 - 61074082 GGACATT---ACATACTGCGGTGTTTCATAGGAAGCCCACTG----------------AACTGGGAATGACTGATGTTCACAGACTGTGTAAAATCTAAAAT i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 56938 14910 - 81552678 M a score=217117.000000 s hg38.chr17_GL383563v3_alt 99200 105 + 375691 CTACCGCCAGAggcctggcacaggggctcatgcctgtaatcccagcactttgggaggccgaggcaggaggatcactggaggtcaggagtttgagacttgcctggc s panTro4.chr17 92502 105 + 82630442 CTACCGCCAGAggcctggcacaggggctcatacctgtaatcccagcactttgggaggccgaggcaggaggatcactggaggtcaggagtttgagacttgcctggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486460 105 - 17838096 ATACCACCAGAggcctggcacaggggctcatgcctgtaatcccagcactttgggaggccgaggcaggaggatcactggaggtcaggagttcgagacttgcctggc i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27782 105 + 80904711 GTACCACCAGAggcctggcacaggggctcacgcctgtaatcccagcactttgggagactgaggcaggtggatcattcgaggtcaggagtttgagaccatcctggc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27212 105 + 80997621 GTACCACCAGAggcctggcacaggggctcacgcctgtaatcccagcactttgggaggccgaggcaggaggatcaccagaggtcaggagttcgagacttgcctggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39337 105 + 74645514 GTACCACCAGAGGCCTGGCACacgggctcacgcctgtaatcccggcactttgggaggctgaggcaggtggatcaccggaggtcaggagttagagacttgCCTGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31636 105 + 75148670 GTACCACCAGAggcctggcacaggggttcacgcctgtaatcccggcactttgggaggctgagacaggaggaacaccggaggtcaagagttcgagacttgcctggc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845132 78 - 1291538 GTA-CACCAGAggcctggcacaggggctcatccctataatcccagcattctgggaggccgaggcagggggatcactggc-------------------------- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e canFam3.chr9 15607283 0 - 61074082 C e nomLeu3.chr19 56938 14910 - 81552678 M a score=209918.000000 s hg38.chr17_GL383563v3_alt 99305 133 + 375691 caacatggcgaacccccgtctctactaaaaataccaaaattagccaggcgtggtggcgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcattcaaggtcaggagtttgagaca--cctgga s panTro4.chr17 92607 133 + 82630442 caacatggcgaacccccgtctctactaaaaataccaaaattagccaggcatggtggcgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcattcaaggtcaggagtttgagaca--cctgga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486565 133 - 17838096 caacatggcaaacccccgtctccactaaaaataccaaaattagccaggcatggtggcgcacacctgtaatcccagcactttgggaagctgaggcaggtggatcattcgaggtcaggagtttgagaaa--cctggc i ponAbe2.chr17_random C 0 C 0 s macFas5.chr16 27317 133 + 80997621 caacctggcgaaccc--gtctctactaaaaatacaaaaattaAccaggcatggtggtggacacctgtaatcccagcactttgggagactgaggcaggtggatcattcgaggtcaggagtttgagaccatcctggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39442 133 + 74645514 CAACCCGgcgaacccctgtctctactaaaaatacaaaaattaaccaggcgtggtggtgcacacctgtaatcccagcactttgggagactgaggcaggtggatcattcgaggtcaggagtttgagaca--cctggc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31741 133 + 75148670 cagcctggcaaacccctgtctctactaaaaatacaaaaattaAccaggcacgatggtgcacacctgtaatcccagcactttgggaggctgaggcaggtggatcattcgaggtcaggagtttgagaca--cctggc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845210 127 - 1291538 caatgtggcaaaccc--atctctactaacaatacaaaaattagccaggcatgggggcttacacctgtattcccagcactttgggaggttgaggcagatggatca------gttaggagttcgagtttggcttggc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e canFam3.chr9 15607283 0 - 61074082 C e rheMac3.chr16 27887 0 + 80904711 C e nomLeu3.chr19 56938 14910 - 81552678 M a score=457881.000000 s hg38.chr17_GL383563v3_alt 99438 208 + 375691 caatatggtgaaaccccatctctaccaaatatacaaaaattaaccaggcgtggcggcacacgcctgtagtcccagctactcaggaggctgaggcatgagaattgtttgaactcaggaggtagaggttgcagtgaacagagattttgccactgaactccagcctggatgacagagcaagactcagtctcaaaaaataataata--------ataaaa s panTro4.chr17 92740 208 + 82630442 caatatggtgaaaccccatctctaccaaatatacaaaaattaaccaggcgtggcggcacacgcctgtagtcccagctactcgggaggctgaggcatgagaattgcttgaactcaggaggtagaggttgcagtgagcagagattttgccactgaactccagcctggatgacagagcaagactcagtctcaaaaaaaaataata--------ataaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486698 205 - 17838096 caatatggtgaaaccccatctctactaaatacacaaaaattaaccgggcatggtggcgcatgcctgtagtcccagctactcgggaggctgaggcatgagaattgcttgaacccgggaggtagaggttgcagtgagcagagattgtgccactgaactccagcctggatgacagagcaagactcagtctcaaaa---aataaca--------ataaaa i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 27887 215 + 80904711 caatatggtgaaaccccgtctctaccaaaaatacaaaaattagccgggcatggtggcacaggcctgtagtcccagctactcgggaggctgaggcacgagaagtgcttgaacccggaaggtagaggttgcagtgagtcaagattgtgccactgaactccagcctgggtgacagagcaagacttggtctcaaaaaa-aataataaaaattttaaaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27450 215 + 80997621 caatatggtgaaaccccgtctctaccaaaaatacaaaaattagccgggcatggtggcacaggcctgtagtcccagctactcgggaggctgaggcacgagaagtgcttgaacccgggaggtagaggttgcagtgagtcaagattgtgccactgaactccagcctgggtgacagagcaagacttggtctcaaaaaa-aataataaaaattttaaaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39575 215 + 74645514 caatatggtgaaaccccgtctctaccaaaaatacaaaaattagccgggtgtggtggcacaggcctgtagtcccagctactcgggaggctgaggcacgagaagtgcttgaacccgggaggtagaggttgcagtgagtcaagattgtgccactgaactccagcctgggtgacagagcaagacttggtctcaaaaaa-aaaaaataaaataaaataaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 31874 215 + 75148670 caatatggtgaaaccccgtctctaccaaaaatacaaaaattagccgggcaaggtggcacaggcctgtagtcccagctactcgggaggctgaggcacaagaagtgcttgaacccgggaggtagaggttgcagtgagtcaagattgtgccactgaactccagcctgggtgacagagcaagacttggtctcaaaaaa-aataataaaattaaaataaaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845337 216 - 1291538 caacatagtgaaacctcgtctctgctaaaaatacaaaaattagctgggtgtggtggcacgtgcctgtaatcccagctactcaggaggctgagacacgagaatcacttgaacccagaaggtagaggttgcagtgagccgagattgtgccactgcattccagcctgggtgacagagcaagactctgtctcaaaaaaacataaaaataaacaaacaaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e canFam3.chr9 15607283 0 - 61074082 C e nomLeu3.chr19 56938 14910 - 81552678 M a score=89443.000000 s hg38.chr17_GL383563v3_alt 99646 32 + 375691 GTACCACCAGAATGTGGCTGTACTGTCAGGGG s panTro4.chr17 92948 32 + 82630442 GTACCACCAGAATGTGGCTGTACTGCCAGGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486903 32 - 17838096 GTACCACCAGAATGTGGCTTTACTGCCAGGGG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 28102 32 + 80904711 GTATCACCAGAATGTGGCTTTACTGCCAGGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27665 32 + 80997621 GTATCACCAGAATGTGGCTTTACTGCCAGGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39790 32 + 74645514 gtatcacCAGAATGTGGCTTTACTGCCAGGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32089 31 + 75148670 GTATCACCAGAATGTGGCTTTACTGCCA-GGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845553 32 - 1291538 GTATCACCAGAATGTGGCTTTACTGCCGGGGG i calJac3.chrUn_GL286409 C 0 I 155 s canFam3.chr9 15607283 32 - 61074082 GTAGCATCAAAATGTGTCTTTCCTGCCAGAGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=25578.000000 s hg38.chr17_GL383563v3_alt 99678 15 + 375691 -TGCATCCCCAGCTGC s panTro4.chr17 92980 15 + 82630442 -TGCATCTCCAGCTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486935 15 - 17838096 -TGCATCCCAAACTGC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 28134 15 + 80904711 -TGTATCCCAAGCTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27697 15 + 80997621 -TGTATCCCAAGCTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39822 15 + 74645514 -TGTATCCCAGACTGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32120 15 + 75148670 -TGTATCCCAAACTGT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15607315 16 - 61074082 AGATACCCTAAACTGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e calJac3.chrUn_GL286409 845585 155 - 1291538 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=256131.000000 s hg38.chr17_GL383563v3_alt 99693 123 + 375691 ACTCCTGCGGT-CACTGTGAGTCC-CTG-AACGGCACCAATGGGCCGGTAGCGCATCCAGCAACGCCCTGATCATGGCCACGCACAGGGAC----------GCACATGCTTTCACGAacgcacaccacacatgtgg s panTro4.chr17 92995 123 + 82630442 ACTCCTGCGGT-CACTGTGAGTCC-CTG-AATGGCACCAATGAGCCGGTAGCGCATCCAGCAACGCCCTGATCGTGGCcacgcacagggac----------gcacatgctttcacgaacgcacaccacacatgtgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3486950 133 - 17838096 ACTCCTGCGGT-CACTGTGAGTCC-CCG-AACTGCACCAATGAGCTGGTAGCGCATCCAGCAACGCCCTGATCATGGCCACGCACAGGGACGCACAAGCATGCACATGCGTTCATGAacacacaccacacatgtag i ponAbe2.chr17_random C 0 I 741 s rheMac3.chr16 28149 123 + 80904711 ACTCCTGTGGT-CACTGTGAGTCC-CTG-AATGGCACCAATGAGCTGGTAGCGCACCCAGTAATGCCGTGATCACGGCCATGCACAGGGAT----------Gcacacgctttcacgaacacacaccacacacacgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27712 123 + 80997621 ACTCCTGTGGT-CACTGTGAGTCC-CTG-AATGGCACCAATGAGCTGGTAGCGCACCCAGTAATGCCGTGATCACGGCCATGCACAGGGAT----------GCACACGCTTTCACGAacacacaccacacacacgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39837 123 + 74645514 ACTCCTGTGGT-CACTGTGAGTCC-CTG-AGCGGCACCAATGAGCTGGTAGCGCACCCAGTAATGCCGTGATCACGGCCATGCACGGGGAT----------GCACATGCTTTCAcgaacacacaccacacacacgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32135 123 + 75148670 GCTCCTGGGGT-CACTGTGAGTCC-CTG-AACGGCACCAATGAGCGGGTAGCGCACCCAGTAATGCCGTGATCACGGCCATGCACAGGGGT----------GCACATGCTTTCACGAacacacaccacacacacgc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845740 116 - 1291538 ATTCCTGTGGTCCAATGTGTGTCCGTCA-AATTCTCCCAATGAGCTGGTAGCACATCCAGCAATGCCCTGAACATGGCCATGCACAGGCAC----------GCACACACTTTCACCAacacacatag--------- i calJac3.chrUn_GL286409 I 155 C 0 s canFam3.chr9 15607331 93 - 61074082 ACTCCTGTGGT-CACCGTATGTCT-CTGAAACCAGACAAATGAGCTACCAGCAAATTCAA---------------------GCA-AGGCGT----------GCCCATGCTCTCAC---------CCATCCACGTGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=189551.000000 s hg38.chr17_GL383563v3_alt 99816 155 + 375691 acacacacactgtcgcacacaga---cacgtact--ga----catatgctcttacacacaattcacacacgagcacacacacacacacgctgacac-cccacgtacatacccacGTGGTTGTTTGTTTATGCCAGTGATGAAAACTCAGGAAC-ACTAAGGCAGGG s panTro4.chr17 93118 153 + 82630442 acacacacactgtcgcacacaga---cacgtact--ga----catatgct--tacacacaattcacacacgagcacgcacacacacacgctgacac-cccacgtacatacccacGTGGTTGTTTGTTTATACCAGTGATGAAAACTCAGGAAC-ACTAAGGCAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3487824 149 - 17838096 acacacacactgtcg----caga---cgcgcact--ga----catacgctctcatacacaattcacacatgagca--cacatacacacgctgacac-cccacgtacatacccacGTGGTTGTTTGTTTATGCCAGTGATCAAAACTCAGGAAC-ACTACGGTAGGG i ponAbe2.chr17_random I 741 C 0 s rheMac3.chr16 28272 117 + 80904711 --agacacacagtcacacacaga---tatgtact--ga----cacatgctcttacgcacaagtcacacacaagca------------------------------catacccacacGGTTGCTT-------CCAGTGATCAAAACTCAGGAAC-ACTACAGTAGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27835 117 + 80997621 --agacacacagtcacacacaga---tacgtact--ga----cacatgctcttacgcacaagtcacacacaagca------------------------------catacccacacGGTTGCTT-------CCAGTGATCAAAACTCAGGAAC-ACTACAGTAGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 39960 117 + 74645514 --ag--acacagtcacacacaga---tatgtact--ga----cacacgctcttacgcacaagtcacacacaggca------------------------------cacccccacGTGGTTGTTT----ATGCCAGTGATCAAAACTCAGG-AC-ACTACAGTACGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32258 121 + 75148670 --agacacacagtcacacgcaGA---TATGTACT--GATATGTACATGCTCTTACGCACAAGTCACACACAAGCA------------------------------CACCCCCACACGGTTGCTT-------CCAGTGATCAAAACTCAGGAAC-ACTACAGTACAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845856 119 - 1291538 ------acactctcacacatacagttcacatatg--gg----cacatac----acacaca---cacacacagaca--------------------c-CCCATGAACACATCCACGTGGTTGTTT----ATGCCGGTAATTAAAACTCAGGA---ACTACAGCAGGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15607424 156 - 61074082 ACGAACACACAGGCATGCACGCAGTCCACATACTTGAA----AATATGCCCGCCTGCACT-TTCACAGGCATACACTCATACACACATCCCTGCACGCTCA----CGTCCCCACATGGCTGTTT-GTTGTGCCAGGGCTCAAAACTCAGAAACAACCATAGTAGGG i canFam3.chr9 C 0 I 4 e mm10.chr11 75777707 288 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=5348.000000 s hg38.chr17_GL383563v3_alt 99971 2 + 375691 CT s panTro4.chr17 93271 2 + 82630442 CT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3487973 2 - 17838096 CT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 28389 2 + 80904711 CT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27952 2 + 80997621 CT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 40077 2 + 74645514 CT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32379 2 + 75148670 CT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845975 2 - 1291538 CT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e canFam3.chr9 15607580 4 - 61074082 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=440428.000000 s hg38.chr17_GL383563v3_alt 99973 272 + 375691 GGTGTTGCttttttttt--------------ttttttt-----gagacagagtcttgctcttgctcttgtcacccaggctggagtgcaacggtgcaatctcggctcactgcaacctccgcctctcaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcatgcacccccacacccggctaatttttttatttttagcagagacggggtttcgccatgttggccaggct-ctctcgaactcttgacctcatgacccacctgccttggcctcctaa s panTro4.chr17 93273 275 + 82630442 GGTGTTGCttttttttt--------------ttttttt--tttgagacagagtcttgctcttgctcttgtcacccaggctggagtgcaacggtgcaatctcggctcactgcaacctccgcctctcaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcatgcacccccacacccggctaatttttttatttttagcagagacggggtttcgccatgttggccaggct-ctcttgaactcttgacctcatgacccacctgccttggcctcctaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3487975 271 - 17838096 AGTGTTGCCtttttttt--------------ttttttttttttgagacagag------tcttgctcttgtcacctaggctggagtgcaatggtgcaatcttggctcactgcaacctccgcctctcaagttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacgtgccaccacacctggctaatttttgtatttttagtacagacggggtttcgccatgttggccaggct-atctcgaactcttgaccacgtgacccacctgccttggcctcctaa i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 28391 277 + 80904711 GGTGTTGCCttttccttctttc---------ttttttttttttgagacagag------tctccctcctgtcacccaggctggagtgcactggtgtgatcttgtctcacagcaacctccgcctctcaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacgcctggctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcgaacccctgacgtcgtgatccacctccctcggcctcccaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 27954 277 + 80997621 GGTGTTGCCttttccttctttc---------ttttttttttttttgagacag------tctccctcctgtcacccaggctggagtgcactggtgtgatcttgtctcacagcaacctccgcctctcaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacccgccaccacgcctggctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctgatctcgaacccctgacgtcgtgatccacctccctcggcctcccaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 40079 274 + 74645514 GGTGttgccttttccttct------------tcttttttttttgagacagaa------tcttcctcttgtcacccaggctggagtacaatggtgtgatcttgtctcactgcaacctccgcctctcaggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccacccctggctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtctcgaacccttgacctcgtgatccacctccctcggcctcccaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32381 286 + 75148670 GGTGTTGCCTTTTCtttctttctttctttttttttttttttttgagacagag------tcttcctcttgtcacccaggctggagtgcagtagcgtgatcttgtctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcgcccgtcaccacccctggctaatttttgtattttcagtagagatggagtttcgccatgttggccaggctggtctcgaacccttgacctcgtgatccacctccctcggcctcccaa i chlSab2.chr16 C 0 C 0 e mm10.chr11 75777707 288 + 122082543 I e canFam3.chr9 15607580 4 - 61074082 I e calJac3.chrUn_GL286409 845977 0 - 1291538 C e nomLeu3.chr19 56938 14910 - 81552678 M a score=16052.000000 s hg38.chr17_GL383563v3_alt 100245 5 + 375691 gatgt s panTro4.chr17 93548 5 + 82630442 gatgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3488246 5 - 17838096 gatgt i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 28668 5 + 80904711 gatgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 28231 5 + 80997621 gatgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 40353 5 + 74645514 gacgT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32667 5 + 75148670 gatgt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845977 5 - 1291538 GATGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15607584 5 - 61074082 GATGT i canFam3.chr9 I 4 C 0 e mm10.chr11 75777707 288 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=1337564.000000 s hg38.chr17_GL383563v3_alt 100250 652 + 375691 tgCCTTTCTTAAGTGACATAGACCATGTGGAAAAACCAGGTTACCTGTGGTTAGTGACTAACAATAAAACAGGAAAGGTTATATCCATCACACAAATGTC--TGAGGGGGAGAGAATGTGACAA-GGAATAAAATTGGATCAAATTCTGCAAAA----GTAACTGGGATTCTGGGAAGAAGCCGTGGCCTCA------------GGCTGACTCG-CCCCCGGGGCTTGACTTGGGCTAAGCTCGA-----GGTGAGTCCACGTCCCCGGG-----CCCCACTGGGGCTGGGTACACTGGGGACAGCCGCCGGGCTCTGTCCTCCCAAACTTGCCCCTTGCCCAGTCCTCTTAGGGGGACAACGTGCCATCGAGGGGACCATGCCTCCGCCT--------GTGTCCTGAACGCTGGGAGGCTGAGGCCCCAGGATTTCTCTTGACCCCAGTGGCACGGGGGACTCCTGG---------CTTCACCAGCC------------------------------------CTATGAACCAGGTGAAGGTGAGGCC------ATAGACAAGGGAG--------------GATGGGG-------GAGGGA--AGAGGGACATAGAGACCAAGACTC--AGAGGGCGTAGCTGCTGGAGCAGGCC-GAGGGCA-AATCTGTTCTGACATAACGTTGAGACAAATGCCATTTCTAGGAAAGGATACTCTGCTGTCTCCTCTGCGTATCTCACAGGCA-CTCAGGTCTAACATGTTCCAA s panTro4.chr17 93553 651 + 82630442 tgCCTTTCTTAAGTGACATAGACCATATGGAAAAACCGGGTTACCTGTGGTTAGTGACTAATAATAAAACAGGAAAGGTTATATCCATCACACAAATGTC--TGATGGGGAGAGAATGTGACAA-GGAATAAAATTGAATCAAATTCTGCCAAA----GTAACTGGGATTCTGGGAAGAAGCCGTGGCCTCA------------GGCTGACTCG-CCCCCGGGGCTTGACTTGGGCTAAGCTCCA-----GGTGAGTCCACGTCCCCGGG-----CCCCACTGGGACTGGGTACATTGGGGACAGCCGCCGGGCTCTGTCCTCCCAAACTTGCCCCTTGCCCAGTCCTCTTAGGGGGACAACGTGCCATCGAGGGGACCGTGCCTCCGCCT--------GTGTCGGGAACGCTGGGAGGCTGAGGCCCCAGGATTTCTCTTGACCCCAGTGGCATGGGGGACTCCTGG---------CTTCACCAGCC------------------------------------CTGTGAACCAGGTGAAGGTGAGGCC------ATAGACAAGGGAG--------------GATGGGG-------GAGGGA--AGAGGGACATAAAGACCAAGACTC--AGAGGGCGTAGCTGCTAGAGCAGGCC-GGGGGCA-AATCTGTTCTGACATAACGTTG-GACAAATGCCATTTCTAGGAAAGGAtactctgctgtctcctctgcgtatctcacaggca-ctcaggtctaacatgttccaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3488251 696 - 17838096 tgCCTTTCTTAAGTGACATAGATCATGTGGAAAAACTGGGTTACCTGTGGTTAGCGACTAATAATAAAACAGAAAAGGTTATATCCATCACACAAATCTC--TGAGTGGGAGAGAATGTGACAAGGGAATAAAATCGCATCAAATTCTGCAAAA----GTAACGGGGATTCTGGGAAGAAGCCGTGGCCTCA------------GGCTGACTTG-CCCCCGGGGCTTGACTTGGGCTAAGCTGGA-----GGTGAGTCCCCGTCCCCAGG-----CCCCACTGGGGCTGGGTACACTGGGGACAGCCGCCGGGCTTTGTCCTCCTGAACTTGCCCCTTGCCAAGCCCTCTTA-GGGGACAACATGCCAGCGAGGGGACCATGCCTCCGCCT--------GTGTCCTGAACACTGGGAGGCTGAGGCCCCAGCATTTCTCTTGACCCCAATGGCACTGGGGACTCCTGG---------CTCCACCAGCCCTATGAACACTGAGAGGCTGAGGCCCCAGCATTTCTCTATGAACCAGGCGAAGGTGAGGAC------AGAGACAAGGCAG--------------GATGGGGGAGGGAAGAGGGA--AGAGGGACATAGAGACCAAGACTC-GGGAGGGCGCAGCTGCTGGAGCAGGCC-GGGGGTA-AATCTGTTCTGACATAACGTCCAGACAAATGCCATTTCTAGGAAAGGATACTCTTCTGtctcctctgcgtatctcacaggca-ctcaggtctaacacgttccag i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 28673 589 + 80904711 tgCCTTTCTTAAGTGACATAGATCATATGGAAAAACTGGGTTACCTGTGGTGAGTGACTAATAATAAACCAGAAAAGCTTATACCCATCACACGAATGTC--TGAGTGGGAGAGAAGGTGACAAGGGAATAAAATTGGATCAAATGATGAAAAA----ACAACTGGGATTCTGGGAAGAAGCCCTGGCCACAGTCAGCCCTGGGGGCTGACTCA-CCCCCAGGGCTTGACT---------------------TGAGTCCACATTCCCAGG------CCCACTGGGGCTGGGTACACTGGGGACAACCGCTGGGCTCTGTCCTTCTGAACTTGCCCCTTGCCCA--------------------------------------GCCTCTGCCT--------GTGCCCTGAACACTGGGAGGCTGAGGCCCCGGCATTTCTCTTGACCCTGGTGGCACTAGGGACTCCTGG---------CTTCATCAGCC------------------------------------CTATGAACCAGGTGAAGGCCAGGCC------AGAGACAAGGGAG--------------GGTG------------GGGA--AGAGGGACATAGAGGCCAAGACGC-GGGAGGGCGTAGCTGCTGGAGCAGGCCAGGGGGCACAATCTCTTCTGACATAACGTTCAGACAAAGGCCATT-------------------CTGTCTCCTCTGAGTATCTCACAGGCA-CTCAAGTCTGACACGTTCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 28236 582 + 80997621 tgCCTTTCTTAAGTGACATAGATCATATGGAAAAACTGGGTTACCTGTGGTGAGTGACTAATAATAAACCAGAAAAGGTTATACCCATCACACGAATGTC--TGAGTGGGAGAGAAGGTGACAAGGGAATAAAATTGGATCAAATGATGAAAAA----ACAACTGGGATTCTGGGAAGAAGCCCTGGCCACA------------GGCTGACTCA-CCCCCAGGGCTTGACT---------------------TGAGTCCACATTCCCAGG------CCCACTGGGGCTGGGTACACTGGGGACAACCGCTGGGCTTTGTCCTTCTGAACTTGCCCCTTGCCCA--------------------------------------GCCTCTGCCT--------GTGCCCTGGACACTGGGAGGCTGAGGCCCCGGCATTTCTCTTGACCCTGGTGGCACTAGGGACTCCTGG---------CTTCATCAGCC------------------------------------CTATGAACCAGGTGAAGGCCAGGCC------AGAGACAAGGGAG--------------GGTGGGG-------CAGGGA--AGAGGGACATAGAGGCCAAGACGC-GGGAGGGCGTAGCTGCTGGAGCAGGCCAGGGGGCACAATCTCTTCTGACATAACGTTCAGACAAAGGCCATT-------------------CTGtctcctctgagtatctcacaggca-ctcaagtctgacacgttccaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 40358 582 + 74645514 TGCCTTTCTTAAGTGACATAGATCATATGGAAAAACTGGGTTACCTGTGGTGAGTGACTAACAATAAACCAGAAAAGGTTGTACCCATCACACGAATGTC--TGAGTGGGAGAGAATGTGACAAGGGAATAAAATTGGATCAAATTATGAAAAA----ACAACTGGGATTCTGGGAAGAAGCCCTGGCCACA------------GGCTGACTCA-CCCCCAGGGCTTGACT---------------------TGAGTCCACATCCCCGGG------CCCACTGGGGCTGGGTACACTGGGGACAACCGCTGGGCTTTGTCCTTCTGAACTGGCCCCttgccca--------------------------------------gcctctgcct--------gtgtCCTGAACACTAGCAGGCTGAGGCCCCGGCATTTCTCTCCACCCTGGTGGCACTGGGGACTCCTGG---------CTTCATCAGCC------------------------------------CTATGAACCAGGTGAAGGCCAGGCC------AGAGACaagggag--------------ggtgggg-------caggga--agaggGACATAGAGGCCAAGACGC-GGGAGGGTGTAGCTGCTGGAGCAGGCCAGGGGGCACAATCTATTCTGACATAACGTTCAGACAAAGGCCATT-------------------CTGTCTCCTCTGAGTATCTCACAGGCA-CTCAAGTCTGACACGTTCCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 32672 583 + 75148670 tgCCTTTCTTAAGTGACATAGATCATATGGAAAAACTGGGTTACCGGTGGTGAGTGACTAATAATAAACCAGAAAAGGTTATACCCATCACACAAACGTC--TGAGTGGGAGAGAATGTGACAAGGGAATAAAATTGGATCAAATTATGAAAAA----ACAACTGGGATTCTGGGAAGAAGCCCTGGCCACA------------GGCTGACTCACCCCCCAGGGCTTGACT---------------------TGAGTCCACATCCCCGGG------CCCACTGGGGCTGGGTACACTGGGGACAACCGCTGGGCTTTGTCCTTCTGAACTTGCCCCTTGCCCA--------------------------------------GCCTCTGCCC--------GTGTCCTGAACACTGGGAGGCTGAGGCCCCAGCATTTCTCTTGACCCTGGTGGCACTAGGGACTCCTGG---------CTTCATCAGCC------------------------------------CTATGAACCAGGTGAAGGCCAGGCC------AGAGACAAGGGAG--------------GGCGGGG-------GAGGGA--AGAGGGACATAGAGACCAAGACGC-GGGAGGGCGTAGCTGCTGGAGCAGGCCAGGGGGCACAATCTGTTCTGACACAACGTTCAGACAAAGGCCATT-------------------CTGTCTCCTCTGAGTATCTCACGGGCA-CTCAAGTCTGACGCGTTCCAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 845982 629 - 1291538 TGCCTTTCTTAAGTGACATAGATCGTGTGGGAAAACCAGGTTACCTGTGGTTAGCAACTAATAATAACACAGAAAAAGTTACATCCATCCCGCAAATGTC--TGGGTGGGAGAGAACGTGATAAGGAAATAAAACTGGACCAAGTGATGCGGAAGGACAGAACTGGGACTCTGGGAGGAAGCCCCAGTCACA------------GGCTGACTTG-TTCCCAGGGCTTGACTTGGGTTAAGCTGGA-----CGTGAGTCCACATTTCCTGG-----CCCCACTGGGGCTGGGCACACTGGGGACAGCTGCTGGGCTTTGTCCTCCTGAACTTGCCCCTTGCCCAGACCTCTAA-GGGGACTATGTGCCAGGAAGGGGACCATGCCTCTGCCT--------GTGCCCTGAACACTAGAGGGCTGAGG-GCCAGCATTTCTCTTGACCCTGGTGGCACTGGGGAACCCTGGTGAGAGGGCCTTCACCTGGT------------------------------------TCAT---------AAGGGCTTTGCC---------------------------------------------------------AGCCCTATATACACCAAGACTC-AGGAGGGCGTAGCTGCTGGAGCAGGCC-GGGGGCAAAATCTCTTCTTACATAATGTTCAGACAAGTGCCATTTTCCGGAAAGGATACTCTTCTGTCTCCTCTGCGTATCTCACAGGCA-CTCAAGTCTAACATGTTCCAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75777995 578 + 122082543 TGCCCTCCTGAAA-GGTGTACACCATTTGGAAAATTTGGGTCACCTCAAGTGA----------------CATGGAAAGTTCTACCCATCACGCATGCACC--CGAGT-GGAGAGAATGTGACATGAGAATACAGTCTGAGAAATCCACGCACAA----A-----GGCACT----------GTCTCAGCTGCT------------GGCTGG---A-TTCTAAGGGCTGGACTTGGGTCCAGCTTTT-----GGAGCAGCCATGTTCCAGGGTCTAGTCCTGCCGGGCCT-GGCACACAGGGATTAAATGCTGGGATTCCTCTGTTTG------------GCTTA--------------------------------------GGCTTTGAGTAAACAGACATGTCCTG-ACATTAGGAGATAAAGGGCTTAGCCTGTCT-TTAGCCTTGA--GCACTGGGG-CTCCTTA---------GACCCTCTGCC------------------------------------CTATAAACCAGAGGAAGGAGAGATG------AAGTGAGAAGGCA--------------GACAGGA-------AAGTGATTGGAAAGGAACAGGCACCAAGGCTCTGGGAGGGCTCAGCTGCTGAAGACAACT-GGGGGCCAAATTTGTCATGACATCATGCTGA-ACAATTACAATGTCTCAGAGAGAATTATGTGCTGTCTCCTCTGGGCATCTCATGGCTC-TCCTGGCCTAACACGCTCCAA i mm10.chr11 I 288 I 88 s canFam3.chr9 15607589 635 - 61074082 TGCCTTTTATAAGTCACATTGATCATTTGGAAAAACTGGGTT----TTGGTTAGTGACTAATAATAAAATAAAAAAGGTCTTACCTATAATGCAAAGGTCTATGAGTAGGAAAGAATATGACCAGGGAATAAAATTTGGTCAAATTATGCAAAAAGGCAGAGCCAGGATG-------------TTGGCCTCA------------GGTAGACTTT-TTCCCAGGGCTTGGCTTGGGCCAGCCTGCACTGAGCATTCGTCCCCATGCCCAAG-----CCCCAGCAGGGATGGGT----------TGGCTGCCGGGCTATGTCCTCTTGAGCTTTTCCCCTGCCCAGGACTCTTAGGGGGAAGATGTCCTCAAAAGGGGA------------TT--------GTGCCCTGAACATTGGGCTGCTGGAG--------GGTCTCAGGACCCTGG---------GGCCTCCTGGCCAATG---CCTCCCTGCAC------------------------------------TTCTGAATAGGGTCAAGGCCAGGCCTCCAAAAGAGGCAGGGGAGAGAGGACGGGGTCAGGAGGGG-------AGGGGA--AGGGAGACACCCATGGACAGAGTT-TGGGAGGCTCAGCTGCTGCAGACAACA-GGAGACAAAATTGGTTTGGATATGATTTTTAACAAATTGCAATTTCTAGGAAAGAATTATT--Ttctcttctctaggcagctcacaggtgcctcatgcctgtcgtgttccgg i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 56938 14910 - 81552678 M a score=478527.000000 s hg38.chr17_GL383563v3_alt 100902 231 + 375691 GCGTGCTCCTTGCGCGTCCTGTCCACCCGTGGTCCCTGCTG-AGTCCTCTGAGTGCAGCAAACAGCCCCTCAG-GCTTCAGTGGCTCAGGCCCCAAACCTCGGATCTGCCCTTCCCTCACCCAAGGACGTCCTATCTGCTGCCTGCACATCCGGTTCAGAATCAAGCCCT--CCTACCGCTGCCA-AGGTCAGGCCAGGGTTGTGCCCATCTCTCCCCATC-------TCCCCAGGCCTCCTG s panTro4.chr17 94204 231 + 82630442 gcgtgctccttgcacgtcctgtccacccgtggtccctgctg-agtcctctgagcgcagcaaacagcccctcag-gcttcagtggctcaggccccaaacctcggatctgcccttccctcacccaaggacgtcctatctgctgcctgcacatccagttcagaatcaagccct--cctaccgctgcca-aggtcaggccagggttgtgcccatctctccccatc-------tccccaggcctcctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3488947 231 - 17838096 gtgtgctccttgcacgtcccatccacctgtggtccctgctg-agtcctctgagcacagcaaacagcccctcag-gcttcagtggctcaggccccaaacctcggatctgcccttccctcacccaaggacgtcctatctgctgcctgcacatccggttcagaatcaagccct--cctaccgctgcca-aggtcaggccagggctgcgcccgtctctccccagc-------cccccgggcctcctg i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 29262 232 + 80904711 GCACGCTCCCTGAGAGTCCCGTCCACCCGTGGCCCCTGCTACGGTCCTCTGAGTGCCGCGAAAAGCCCCTCAG-GCTCCGGTGGCTCCGGCCCCAAACCTCGGACCTGCCCTTCCCTCACCCAAGGATGTCCTATCTGCTGCCCGGACATCCGGTTCAGAGTCAAGCTCT--CCTACCGCCGCCA-AGGTCAGGCCGGGGCTGTGCCCATCTCTCCCCATC-------TCCCCGGGCCTCCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 28818 232 + 80997621 gcacgctccctgagagtcccgtccacccgtggcccctgctacggtcctctgagtgccgcgaaaagcccctcag-gctccggtggctccggccccaaacctcggacctgcccttccctcACCCAAGGATGTCCTATCTGCTGCCCGGACATCCGGTTCAGAGTCAAGCTCT--CCTACCGCCGCCA-AGGTCAGGCCGGGGCTGTGCCCATCTCTCCCCATC-------TCCCCGGGCCTCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 40940 231 + 74645514 GCACGCTCCCTGAGAGTCCCGTCCACCCGTGGCCCCTGCTACGGTCCTCTGAGTGCCACGAACAACCCCTAAG-GCTCCGGTGCCTCAGGCCCCAAACCTCGGACCTGCCCTTCCCTCACCCAGGGATGTCCTATCTGCTGCCTGGACATCCGGTTCAGAGTCAAG-TCT--CCTACTGCCGCCA-AGGTCAGGCCAGGGCTGTGCCcatctctccccatc-------tccccgggcctcctg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 33255 229 + 75148670 GCACGCTCCCTGAGAGTCCCGTCCACCCGTGGCCCCTGCTACAGTCCTCTGAGTGCCGCGAACAGCCC--GAG-GCTCCAGTGGCTCCGGCCCCAAACCTCGGACCTGCCCTTCCCTCACCCAA-GATGTCCCATCTGCTGCCTGGACACCCGGCTCAGAGTCAAGCTCT--TCTACCGCCGCCA-AGGTCAGGCCAGGGCTGTGCCCATCTCTCCCCATC-------TGCCCGGGCCTCCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 846611 229 - 1291538 GCACGCTCCTTGAGTGTCCCACCTGCCTGTGGTCCCTGCCCCAGTCCTCTGGACACAGTGAACAGCCTCTCAG-GCTTCAGGGGCTCAGACTCCAAACCTCAGGCCTGCCCTCCCCTCACCCAACGAAGTCCTATCTGCTACCTGTACATCCGGTCCAGAATAAAG-CCC--CCTCCCGCCGCAG-AGGCCAGGTCAGGGCC-TCCCCATCTC-CCCTGTC-------TCCCCGGGCCTCTAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15608224 206 - 61074082 ttgagctcca-gagcatcc------ccagttgttcctcccg-ggctctccccacacagttaatgacacctcatctctccaggtgctcaA----------------------CTCCCTGGTCCGGGAAAGTTTGACCTG---CCAGCGCACCCAA-CCAGGATCTCACCCTTCTCTCCCTCTGCTACAGCTCCCGTCCAGGCTGGGTCAGGCTCATCCCCTCATGACCGTCCCCATCCTTA--- i canFam3.chr9 C 0 C 0 e mm10.chr11 75778573 88 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=277240.000000 s hg38.chr17_GL383563v3_alt 101133 111 + 375691 CCCTCTCCTCCCTCTTCTTCAAGCCATCCTGAGCCCA--GGCCAGCGAGCCTGGTAAAAT-GTCATCCCCCATGATCC---CTCAGCTTAGCAC-----CCTCCCGTG-GC------CACTCAGAGTGA s panTro4.chr17 94435 111 + 82630442 ccctctcctccctcttcttcaagccatcctgagccca--ggccagcgagcctggtaaaat-gtcatcccccgtgatcc---ctcagcttagcac-----cctcccgtg-gc------cactcagagtga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489178 111 - 17838096 acctctcctccctcttcttcaagctgtcctgagccca--ggccagcgagcctggtaaaat-gtcatcccccgcgctcc---ctcggcttagcac-----cctcccgtg-gc------cactcagagtga i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 29494 111 + 80904711 CCCTCTCCTCCCGCTTCTTCAAGCCATCCTGAGCCCA--GGCCAGTGAGGCTGGTAAACT-GTCATCCCCCGCACTCC---CTCAGCTTCGCGC-----CCTCCCGTG-GC------CACTCAGAGTGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29050 111 + 80997621 CCCTCTCCTCCCGCTTCTTCAAGCCATCCTGAGCCCA--GGCCAGTGAGGCTGGTAAACT-GTCATCCCCCGCACTCC---CTCAGCTTCGCGC-----CCTCCCGTG-GC------CACTCAGAGTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41171 111 + 74645514 ccctctcctccctcttcttcaaGCCATCCTGAGCCCA--GGCCAGTGAGGCTGGTAAACT-GTCATCCCCCGCACTCC---CTCAGCTTCGCGC-----CCTCCCGTG-GC------CACTCAGAGTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 33484 111 + 75148670 CCCTCTCCTCCCTCTTCTTCAAGCCATCCTGAGCCCA--GGCCAGTGAGGCTGGTAAACT-GTCATCCCCCGCAGTCC---CTCAGCTTAGCAC-----CCTCCCGTG-GC------CACTCAGAGTGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 846840 111 - 1291538 CCCTCTCCTCCTTCTTCTTCTAGACTTCCTGAGCCCA-GGGCCAGCAAGCCTGGTAAAAT-GTCATCCCCTGCGTTCC---CTCTGCTTGGCA------CCTCCCGTG-GC------CACTCAGAGTGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75778661 94 + 122082543 CCCTCGCCTTCCTCTGCTTCTGGCCATTCTGAGCCCACCAGGCAGGGAACCTGTTAAAAT-AACACC-----------------------ATGC-----CCTGCCTTGAGC------CACTCTTAGTGA i mm10.chr11 I 88 I 1097 s canFam3.chr9 15608430 112 - 61074082 GCCCCTTTTCCCTC---------CCGGTCTGCACCCA-------ACGACCCTGTTAAAATAGTCAGATGCCCTAGTCCCTGCTCGGCATAGTCCCTAGTCCCTCTGTG-GCCCACCTCACTTACGGTCA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 56938 14910 - 81552678 M a score=56115.000000 s hg38.chr17_GL383563v3_alt 101244 44 + 375691 AAGCCAGGGTCCTTC------------------------------CTCACCTCC--------ACCCCCTTGACTCTCCATGC s panTro4.chr17 94546 44 + 82630442 aagccagggtccttc------------------------------ctcacctcc--------acccccttgactctccatgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489289 44 - 17838096 aagccagggtccttC------------------------------CTCACCTCC--------ACCCCCTTGACTCTCCACGC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 29605 37 + 80904711 AAGCCAGGGtcac-------------------------------------ctcc--------acccccctgcccctccacgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29161 37 + 80997621 AAGCCAGGGtcac-------------------------------------ctcc--------agcctcctgcccctccacgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41282 31 + 74645514 AAGCCAGGgtcct---------------------------------------------------ccctctgcccctccacgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 33595 44 + 75148670 AAGCCAGGGTCCTCC------------------------------CTCACCTCC--------ACCCCCCTGCCTCTCCACGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 846951 44 - 1291538 AAGCCATGGTCCTTC------------------------------CTCGCCTCC--------AGTCCCTCGCCTCTTCAAGC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15608542 77 - 61074082 -----AGAGTCCCTCCCAGCTCCCTCCACTCCACCAACctctgatctcacctcctaggacctagtcccatcctgctccctgc i canFam3.chr9 C 0 C 0 e mm10.chr11 75778755 1097 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=740649.000000 s hg38.chr17_GL383563v3_alt 101288 271 + 375691 -------------TCACCTCCCCG--------------------------GTCTCCCCTCCC------------------------------------CTCT---CACTCTGCCCCTC--ATGAGTCCCATC------------AC----------------------------------------------------------------AGGCAGGAA----GTTctgcc---ttcccagcacctgccaccgagcca-------ggtacacagca------------------------ggtgctcaatcaa-------------------------------tCCTCTCACCGGCAGCTGCTTCTCCAGGCAGATGCTGAAGGTCTTGGTGTGGTTGGGTTTCAGCTTCTTCAGGGGCACACGTGTCTCCCCGATGAACTCATTGTGCCGGAATTTGTCCTCGTCACACACAGAGATCCTAGAGGGGGCGGTGG- s panTro4.chr17 94590 271 + 82630442 -------------tcacctccccg--------------------------gtctcccctccc------------------------------------ctct---cactctgcccctc--ATGAGTCCCATC------------AC----------------------------------------------------------------AGGCAGGAA----GTTctgcc---ttcccagcacctgccaccgagcca-------ggtacacagca------------------------ggtgctcaatcaa-------------------------------tCCTCTCACCGGCAGCTGCTTCTCCAGGCAGATGCTGAAGGTCTTGGTGTGGTTGGGTTTCAGCTTCTTCAGGGGCACACGTGTCTCCCCGATGAACTCATTGTGCCGGAATTTGTCCTCGTCACACACAGAGATCCTAGCGGGGGCGGTGG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489333 244 - 17838096 -------------TCACCTC--------------------------------------------------------------------------------------------CCCCTC--ATTAGCCCCATC------------GC----------------------------------------------------------------AGGCAGGAA----GTTctgcc---ttcccagcacctgccaccgagcca-------ggtacacagca------------------------ggtgctcaatcaa-------------------------------tCCTCTCACCGGCAGCTGCTTCTCCAGGCAGATGCTGAAGGTCTTGGTGTGGTTGGGTTTCAGCTTCTTCAGGGGCACACGTGTCTCCCCAATGAACTCATTGTGTCGGAATTTGTCCTCGTCGCACACAGAGATCCTAGTGGGGGTGGTGG- i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 29642 265 + 80904711 -------------tcacctcctc---------------------------atctcccctccc------------------------------------ctct---cACTCTGCCCCTC--AGTAGCCCCACC------------AC----------------------------------------------------------------GGGCAGGAA----GTTctgcc---ttcccagcacctgccaccgagcca-------ggcacacagca------------------------ggcactcaat-aC-------------------------------TCCTCTCACCGGCAGCTGCTTCTCCAGGCAGATACTGAAGGTCTTGGTGTGGTTGGCTTTCAGCTTCTTCAGGGGCACGCGTGTCTCCCCGATGAACTCATTGTGCCGGAATTTGTCCTCGTCGCACACAGAGATCCT----GGGTTGGGGG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29198 265 + 80997621 -------------tcacctcctc---------------------------atctcccctccc------------------------------------ctcT---CACTCTGCCCCTC--AGTAGCCCCACC------------AC----------------------------------------------------------------GGGCAGGAA----GTTctgcc---ttcccagcacctgccaccgagcca-------ggcacacagca------------------------ggcgctcaat-aC-------------------------------TCCTCTCACCGGCAGCTGCTTCTCCAGGCAGATACTGAAGGTCTTGGTGTGGTTGGCTTTCAGCTTCTTCAGGGGCACGCGTGTCTCCCCGATGAACTCATTGTGCCGGAATTTGTCCTCGTCGCACACAGAGATCCT----GGGTTGGGGG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41313 266 + 74645514 -------------tcacctcctc---------------------------atctcccctccc------------------------------------ctct---cactctgcccctc--agtagccccACC------------AC----------------------------------------------------------------GGGCAGGAA----GTTCTGCC---TTCCCAGCACCTGCCACCGAGCCA-------GGCACACAGCA------------------------GGCGCTCAACGAC-------------------------------TCCTCTCACCGGCAGCTGCTTCTCCAGGCAGATACTGAAGGTCTTGGTGTGGTTGGCTTTCAGCTTCTTCAGGGGCACGCGTGTCTCCCCGATGAACTCATTGTGCCGGAATTTGTCCTCGTCGCACACAGAGATCCT----GGGTTGGGGG- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 33639 266 + 75148670 -------------TCACCTCCTC---------------------------ATCTCCCCTCCC------------------------------------CTCT---CACTCTGCCCCTC--AGTAGCCCCACC------------AC----------------------------------------------------------------GGGCAGGAA----GTTCTGCC---TTCCCAGCACCTGCCACCCAGCCA-------GGCACACAGCA------------------------GGCGCTCAATGAC-------------------------------TCCTCTCACCGGCAGCTGCTTCTCCAGGCAGATACTGAAGGTCTTGGTGTGGTTGGCTTTCAGCTTCTTCAGGGGCACGCGTGTCTCCCCGATGAACTCATTGTGCCGGAATTTGTCCTCGTCGCACACAGAGATGCT----GGGTTGGGGG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 846995 270 - 1291538 -------------TCGCCTCCTCA--------------------------ATCTCCCCTCCC------------------------------------CTCT---CACTCTGCCCCTC--ATTAG-CCCATC------------AT----------------------------------------------------------------AGGCAGGAA----GTTCTGTC---TTCTCAGCACCTGCCGCTGAGCCA-------GGTATACCACA------------------------GGTGCTCAAGAAA-------------------------------TGCTCTCACCGGCAGCTGCTTCTCCAGGCAGATGCTAAATGTCTTGGTGTGGTTGGGTTTCAGCTTCTTCAGAGGCACTCGCGTCTCCCCGATGAACTCATTGTGCCGGAATTTGTCCTCATCGCACACGGAGATCCTGGCGGGGGTGAGGG- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75779852 326 + 122082543 -------------TCCCCTCCTAG--------------------------ACTTGCCCCCTC------------------------------------CACTATGCTCTCTGCTCCATGAATTATCCCCACTCCTGTGCCATCAAC----------------------------------------------------------------AGGAAGCAA----GTTCCTTCCATCTCCCTGCAACTGTGCCTGAAACACAGTATTGTCACATAGTA------------------------GCTGCTCAGTAAACTCCTGCACGGCTGCGGTGCCAGAGCCTTCTTCCACTCACCGGCAGCTGCTTCTCCAGGCAGATGCTGAATGTCTTGGTGTGATTGGGCTTCAGCTTCTTCAGGGGCACCCGAGTCTCTCCAATGAACTCATTGTGGCGGAATTTGTCCTCATCACACACGGAGATCCT---GGGGGCGATGG- i mm10.chr11 I 1097 I 43 s canFam3.chr9 15608619 429 - 61074082 tccacacagtgggcctcttgctcgggcctccaacaggcttggtacttgctgtttcctctgccaggaatatcccccaaacctccatctaaaccactgggctct---catgcttttctct--gtgaccctgatc------------actgtctaacacaggctgtttgggtgattcacgtccttgaatctgtctcctgcccaagctccacgagggcagggattgtggtctgtt---cccccagcacctgaagctgtgcca-------ggcacagagcagcctgggcagcctgggcagcctgCGGAGCCCCAT-CC-------------------------------CCAACTCACCGGCAGCTGCTTCTCCAGGCAGATGCTGAACGTCTTTGTGTGGTTGGCTTTCAGCTTCTTCAGGGGCACGCGCGTCTCCCCAATGAATTCGTTATGACGGAATTTGTCCTCGTCACACACGGAGATCCT---------GGAGGA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 56938 14910 - 81552678 M a score=185872.000000 s hg38.chr17_GL383563v3_alt 101559 82 + 375691 TGAGGGGCACAGCCAGTGCCTCAGACGCACTGGGCATGGTGGAGGTGTGCGCAGGTAGGGCCAGCCCTGGCTTCTCCTGCCC s panTro4.chr17 94861 82 + 82630442 TGAGGGGCACAGCCAGTGCCTCAGACGCACTGGGCATGGTGGAGATGTGCGCGGGTAGGGCCAGCCCTGGCTTCTCCTGCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489577 82 - 17838096 TGAGAGGCACAGCCAGCGCCTCAGACGCACTGGGCGTGGTGGGGATGTGCGCGGGTAGGGCCAGCCCTGGCTTGTCCTGCCC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 29907 82 + 80904711 TGAGAGGCACAGCCAGCGGCTCGGACGAACGGGGCGTGGGGGGAGTGTGCGCGGGTAGGGCCAGCCCTGGCTTGTCCTGCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29463 82 + 80997621 TGAGAGGCACAGCCAGCGGCTCGGACGCACGGGGCGTGGGGGGAGTGTGCGCGGGTAGGGCCAGCCCTGGCTTGTCCTGCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41579 82 + 74645514 TGAGAGGCACAGCCAGCGGCTCAGACGCATGGGGCGTGGGGGGAGTGTGCGCGGGTAGGGCCAGCCCTGGCTTGTcctgccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 33905 82 + 75148670 TGAGAGGCACAGCCAGCAGCTCAGACGCACGGGGCGTAGGGGGAGTGTGCGCGGGTAGGGTCAGCCCTGGCTTGTCCTGCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847265 82 - 1291538 GAAGAGGCACAGCCAGTGCCTCAGACGCACTGGGCTTGGTGGGGGTATGCGAGGATAGGGCCAGCCCTGGCTTCTCCTTTCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15609048 44 - 61074082 CGGGAGGCATGGCCAGCTCTTCAGACACA------------GAGGTGC--------------------------TCCTGCTT i canFam3.chr9 C 0 I 51 e mm10.chr11 75780178 43 + 122082543 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=260285.000000 s hg38.chr17_GL383563v3_alt 101641 108 + 375691 CAAGCCCTGCCCTGGTCTGGGGTGGGAGACGCACAAGATGCCTGGGCCCTGACAGGGGCAGAGTGTGGCACGATATCAGGCACTGTCCTCATGGACAAGTGTCCTCAG s panTro4.chr17 94943 108 + 82630442 CAAGCCCTGCCCTGGTCTGGGGTGGGAGACGCACAAGATGCCTGGGCCCTGACAGGGGCAGAGTGTGGCACCATATCAGGCACTGTCCTCATGGACAAGTGTCCTCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489659 108 - 17838096 CAAGCCCTGCCCTGGTCTGGGGTGGGAGACGCACAAGATGCCTGGGCCCTGACAGGGCCAGAGTGTGGCATGATGTCAGGCACTGTCCTCATGGACAAGTGTCCTCAG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 29989 108 + 80904711 CAGGCCCTGCCCTGGTCTGGGGTGGGAGACGCACGAGATGCCTGGGCCCTGACAGGGCCAGAGTGTGGCATGATGTCAGGTACTGTCCTCCCGGACAAGTGTCCTCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29545 108 + 80997621 CAGGCCCTGCCCTGGTCTGGGGTGGGAGACGCACGAGATGCCTGGGCCCTGACAGGGCCAGAGTGTGGCATGATGTCAGGTACTGTCCTCCCGGACAAGTGTCCTCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41661 108 + 74645514 caggccctgccctggtCTGGGGTGGGAGACGCACGAGATGCCTGGGCCCTGACAGGGCCAGAGTGTGGCATGATGTCAGGTACTGTCCTCCCGGACAAGTGTCCTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 33987 108 + 75148670 CAGGCCCTGCCCTGGTCTGGGGTGGGAGACGCACGAGATGCCTGGGCCCTGACAGGGCCAGAGTGTGGCATGATGTCAGGTACTGTCCTCCCGGACAAGTGTCCTCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847347 105 - 1291538 CGAGCCCTGCCCTGGTCTGGAGAGGGAGAGGCACAAGATGCCTGGG---TGACAGGACCAGAGTGTGGCATGATGTCAGGCACTGTCCTCCTGGACAAGTGTCCTCCA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75780178 43 + 122082543 I e canFam3.chr9 15609092 51 - 61074082 I e nomLeu3.chr19 56938 14910 - 81552678 M a score=123305.000000 s hg38.chr17_GL383563v3_alt 101749 62 + 375691 GTTGGAAGAGGGGACAGGAGAAGGCAGAACCAGTGCCAGGAGTAGCCAGGAGGCTGGGAGAG s panTro4.chr17 95051 61 + 82630442 GTTGGAAGAGGGG-CGGGAGAAGGCAGAACCAGTGCCAGGAGTAGCCAGGAGGCTGGGAGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489767 62 - 17838096 GTTGGAAGAGGGGACAGGAGAAGGCAGAGCCAGTGCCAGGAATAGCCAGGAGGCTGGGAGAG i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 81499055 59 + 81552678 GTCGGAGGAGGGGAC---AGAAGGCGGGGCCAGTGCCAGGGGTAGCCAGGAGGCTGGGAGAG i nomLeu3.chr19 n 0 T 2592 s rheMac3.chr16 30097 52 + 80904711 GTTGGAAGAGGGGACAGGAGAAGGTGGGGCCGGT----------GCTGGGAGGTGGGGAGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29653 52 + 80997621 GTTGGAAGAGGGGACAGGAGAAGGTGGGGCCGGT----------GCTGGGAGGTGGGGAGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41769 52 + 74645514 GTTGGAAGAGGGGACAGGAGAAGGTGGGGCcagt----------gctgggaggtggggagag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34095 52 + 75148670 GTTGGAAGAGGGGACGGGAGAAGGTAGGGCCAGT----------GCCGGGAGGTGGGGAGAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847452 50 - 1291538 GTTCGAGGAGGGGATAGGAGAAAGCAGGGGTA------------TCCAGGAGGCTGGGAGAG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75780178 43 + 122082543 I e canFam3.chr9 15609092 51 - 61074082 I a score=4683.000000 s hg38.chr17_GL383563v3_alt 101811 2 + 375691 CC s panTro4.chr17 95112 2 + 82630442 CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489829 2 - 17838096 CT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 30149 2 + 80904711 CC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29705 2 + 80997621 CC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41821 2 + 74645514 cc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34147 2 + 75148670 CC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847502 2 - 1291538 CC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75780178 43 + 122082543 I e canFam3.chr9 15609092 51 - 61074082 I e nomLeu3.chr19 81499114 2592 + 81552678 T a score=163874.000000 s hg38.chr17_GL383563v3_alt 101813 56 + 375691 GGTTCTCTGGAGGGAACCACCTCCAGCACCCTGAGAGGCCCCAGGAAGCACCTTCA s panTro4.chr17 95114 56 + 82630442 GGTTCTCTGGAGGGAACCACCTCCAGCACCCTGAGAGGCCCCAGGAAGCACCTTCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489831 56 - 17838096 GGTTCTCTGGAGGGAGCCACCTCCAGCACCCTGAGAGGCCCCAGGAAGCACCTTCA i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 81496522 56 + 81552678 GGTTCTCCTGAGGGAGCCACATCCAGCACCCTGAGAGGCCCCAGGAAGCACCTTCA i nomLeu3.chr19 T 2592 C 0 s rheMac3.chr16 30151 56 + 80904711 GGTTCTCTGAAGGGAACCGGCGCCAGCACCGAGAGAGGCCCCAGGAAGCACCTTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29707 56 + 80997621 GGTTCTCCGAAGGGAACCGGCGCCAGCACCAGGAGAGGCCCCAGGAAGCACCTTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41823 56 + 74645514 GGTTCTCTGAAGGGAACCGCCGCCAGCACCCGGAGAGGCCCCAGGAAGCACCTTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34149 56 + 75148670 GGTTCTCTGAAGGGAACCGCCGCAAGCACCCGGAGAGGCCCCAGGAAGCACCTTCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847504 56 - 1291538 AGTTCTCCAGAGGGAACCACCTCCAGCACCCTGAGAGGCCCCAGGAAGCACCTTCA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75780178 43 + 122082543 I e canFam3.chr9 15609092 51 - 61074082 I a score=359844.000000 s hg38.chr17_GL383563v3_alt 101869 161 + 375691 GGGGACTGGGGCCAGGGTGACCCTTTTCCACCCACCAGGCTCCATTGGCGTGGGCAGACCTTTCTGCCTTTCTTCAA-GCCCCCAGGCTGGAGTTGCTGGCATGAGGTTGAACCCACAGGGGACCATCTGAC------------------------------------------------------------------------------------------------CCTCCAGTCCTGCCTTCATTAGGAAAAGCC s panTro4.chr17 95170 161 + 82630442 GGGGACTGGGGCCAGGGTGACCCTTTTCCACCCACCAGGCTCCATTGGCATGGGCAGACCTTTCTGCCTTTCTTCAA-GCCCCCAGGCTGGAGTTGCTGGCATGAGGTTGAACCCACAGGGGACCATCTGAC------------------------------------------------------------------------------------------------CCTCCAGTCCTGCCTTCATTAGGAAAAGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3489887 162 - 17838096 GGGGACTGGGGCCAGGGTGCCCCTTTTCCATCCACCAGGCTCCACTGGCATGGGCAGACCTTTCTGCCTTTCTTCAATGCCCCCAGGCTAGAGTTGCTGGCATGAGGTTGAACCCACAGGGGAACATCGGAC------------------------------------------------------------------------------------------------CCTCCAGTCCTGCCTTCATTAGGACAAGCC i ponAbe2.chr17_random C 0 C 0 s nomLeu3.chr19 81496578 162 + 81552678 GGGAACTGGGGCCAGGGTGACCCTTTTCCATCCACCAGGCTCCACTGGCATGGGCAGACCTTTCTGCCTTTCTTTGAACCCCCCAGGCTGGAGTTGCTTGTATGAGGTTGAACGCACAGGGGACCATCTGTC------------------------------------------------------------------------------------------------CCTCCATTCCTGCCTTCACTAGTACAAGCC i nomLeu3.chr19 C 0 n 0 s rheMac3.chr16 30207 160 + 80904711 GGGCACTGGGACCAGGGTGACCC-TTTCCATCCACCAGGCTCCGCCGGTGTGAACAGACCTTTCTGCCTTTCTTCAG-ACCCCCAGGCTGGGGTGGCCCGCATGAGGCTGAACCCACAGGAGACCCTATGAC------------------------------------------------------------------------------------------------CCTCCGGTCCCGCCTTCATGAGGACAAgcg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29763 160 + 80997621 GGGCACTGGGGCCAGGGTGACCC-TTTCCATCCACCAGGCTCCGCCGGTGTGAACAGACCTTTCTGCCTTTCTTCAG-ACCCCCAGGCTGGGGTGGCCTGCATGAGGCTGAACCCACAGGAGACCCTCTGAC------------------------------------------------------------------------------------------------CCTCCGGTCCCGCCTTCATGAGGACAAGCg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 41879 160 + 74645514 GGGCACTGGGGCCAGGGTGACCC-TTTCCATCCACCAGGCTCCGCCGGTGTGAACAGACCTTTCTGCCTTTCTTCAg-acccccaggctggggtggccTGCATGAGGCTGAACCCACAGGAGACCCTCTGAC------------------------------------------------------------------------------------------------CCTCCGGCCCCGCCTTCGTGAGGACAAgcg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34205 160 + 75148670 GGGCACTGGGGCCAGAGTGACCC-TTTCCATCCACCAGGCTCCGCCGGTGTGGGCAGACCTTTCTGCCTTTCTTCAG-ACCCCCAGGCTGGAGTTGCCTGCATGAGGCTGAACCCACAGGAGGCCATCTGAC------------------------------------------------------------------------------------------------CCTCCGGTCCTGCCTCCGTGAGGACAAGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847560 253 - 1291538 GGGGAC--AGGCCAGGGTGACCCTTTTCCATCCACCAGGCTCCAATGGCATGGACTAACCTGTCTGCCTGTCTTTGA-A--CCCAGGCTGGAGTTGCTGGCATGAGGTTGAACCCACAGGGGACCATCTGACCCCTAGTCCTGCCTTCACTAGGACAAGCCAGGTGGGGGTGGGTACGAGGAGGGAGCAGCTGTCCGGGACCCTCACCCACCACAGAGCTTTGCCTGACCCCCAGTCTTGCCTTCACTAGGACAAGCC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15609143 38 - 61074082 GGACATTGGGGGCAGAGTG-----------------GGGCCCCAGAGGTGAGGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr9 I 51 C 0 e mm10.chr11 75780178 43 + 122082543 I a score=9837.000000 s hg38.chr17_GL383563v3_alt 102030 17 + 375691 GGGTGGGAGTGGGGGTT s panTro4.chr17 95331 17 + 82630442 GGGTGGGAGTGGGGGTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3490049 17 - 17838096 GGGTGGGAGTGGGGGTT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 30367 9 + 80904711 -------ggc-ggggtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29923 10 + 80997621 -------ggcgggggtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42039 10 + 74645514 -------ggcgggggtg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34365 9 + 75148670 -------GGC-GGGGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847813 16 - 1291538 GGGTGGGGGT-GGGGAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15609181 15 - 61074082 GGGGAGGGGCGTGGG-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75780178 43 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=726777.000000 s hg38.chr17_GL383563v3_alt 102047 239 + 375691 GGGGAGGGAGCAGGCGGCCTGGGACCCTCACCCACCGCAGGGTCTTGCGGATCATGTCTTCATCTGTGATCCCGTAGTAAGTGAGGGTCTCGTTCCATGTGGGGTTCAGAGTGTTACGGAGAGTTTTTGTTCTGAGCTTATTTGCCTGGAGAAGAGAAAAATGATCTTATTAGCATC---AAAGTGtgtatcaaacagaacaatggcccccagagatggccacgtgctcatcttggagcctg s panTro4.chr17 95348 239 + 82630442 GGGGAGGGAGCAGGCGGCCTGGGACCCTCACCCACCGCAGGGTCTTGTGGATCATGTCTTCATCTGTGATCCCGTAGTAAGTGAGGGTCTCGTTCCATGTGGGGTTCAGAGTGTTACGGAGAGTTTTTGTTCTGAGCTTATTTGCCTGGAGAAGAGAAAAATGATCTTATTAGCATC---AAAGTGtgtatcaaacagaacaatggcccccggagatggccacgtgctcatcttggagcctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3490066 239 - 17838096 GGGGAGGGAGCAGGCGGCCCGGGACCCTCACCCACCGCAGGGTCTTGCGGATCATGTCTTCATCTGTGATCCCATAGTAAGTGAGGGTCTCGTTCCATGTGGGGTTCAGAGTGTTACGGAGAGTTTTTGTTCTGAGCTTATTTGCCTGGAGAAGAGAAAAATGATCTTATTAGCATC---AAAGGGtgtgtcagacagaacaatggcccccagagatggccacgtgctcatcttggagcctg i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 30376 236 + 80904711 ggggaggg-gcgggcggccgggg--ccTCGCCTACCGCAGCGTTTTGCGGATCATGTCTTCGTCTGTGATCCCGTAGTAAGTGAGGGTCTCGTTCCACGTGGGGTTCAGAGTGTTACGGAGAGTTTTTGTTCTGAGCTTATTTGCCTGGAGAAGAGAGAGATGATCGTATGAGCATC---GAAGGGtgtgtcagacagaacaacggcccccagagatggccacgtgctcatcttggagcctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 29933 236 + 80997621 ggggaggg-gccggcggccgggg--cCTCGCCTACCTCAGCGTTTTGCGGATCATGTCTTCGTCTGTGATCCCGTAGTAAGTGAGGGTCTCGTTCCACGTGGGGTTCAGAGTGTTACGGAGAGTTTTTGTTCTGAGCTTATTTGCCTGGAGAAGAGAGAGATGATCGTATGGGCATC---GAAGGGtgtgtcagacagaacaacggcccccagagatggccacatgctcatcttggagcctg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42049 236 + 74645514 ggggaggg-gccggcggccgggg--cCCCGCCTACCGCAGCGTTTTGCGGATCATGTCTTCGTCTGTGATCCCGTAGTAAGTGAGGGTCTCGTTCCACGTGGGGTTCAGAGTGTTACGGAGAGTTTTTGTTCTGAGCTTGTTTGCCTGGAGAAGAGAGAGATGATCGTATGAGCATC---GAAGGGTGTGTCAGACAGAACAACGGCCCCCAGAGATGGCCACATGCTCGTCTTGGAGCCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34374 236 + 75148670 GGGGAGGG-GCCGGTGGCCAGGG--CCTCGCCTACCGCAGCGTTTTGCGGATCATGTCTTCGTCTGTGATCCCGTAGTAAGTGAGGGTCTCGTTCCACGTGGGGTTCAGAGTGTTGCGGAGAGTTTTTGTTCTGAGCTTATTTGCCTGGAGAAGAGAGAGATGATCGTATTAGCATC---GAAGGGtgtgtcagacagaacaacggcccccagagacggccacatgctcatcttggagcctg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 847829 238 - 1291538 GAGGAGGG-AGCAGCAGCCCGGGCCCCTCACCCACCGCAGAGTCTTGCGGATCATGTCTTCATCTGTGATCCCGTAGTAAGTGAGGGTCTCGTTCCACGTGGGGTTCAGAGTGTTATGGAGAGTCTTTGTTCTGAGCTTATTTGCCTGGAGAAGGGAAAAATGATATTATTAGCATC---AAAGGAtgtgtcagacagaacagtggcccccagagatggccacatcctcatcttggaacctg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75780221 222 + 122082543 GGGTGGGGTGTAGGCA--CAGGGGCCCTCACCCACCTCAGGGTCTTTCGGACCATGTCCTCATCCGTGATTCCGTAATAAGTGAGGGTCTCGTTCCACGAGGGGTTCAGGGTGTTCCGAAGAGTTTTTGTTCTGAGCTTATTTGCCTGGAAAAAGACAGAGTGATCTTATTTTGATCCTGAATGAGTGT----------------GGCCTCAAAGGTGGC--AGGCCTGGTCCTTCCATTCA i mm10.chr11 I 43 C 0 s canFam3.chr9 15609196 231 - 61074082 -----GGA-CCAGGGCGTCTGAGGCCCTCACCCACCGCAGGGTCTTTCGAATCATGTCTTCATCCGTGATCCCGTAGTAAGTAAGGGTCTCGTTCCATGTGGGGTTCAGAGTGTTTCGGAGAGTTTTCGTTCTGAGTTTATTTGCCTGGTGAGAGCAGAAAAGATGCTCTGAGCATC---TGGGAGCCCGAGGggcagaataatg--tcccaaagacggccttgcctggtccctgggaccta i canFam3.chr9 C 0 I 239 e nomLeu3.chr19 81496740 0 + 81552678 I a score=114633.000000 s hg38.chr17_GL383563v3_alt 102286 60 + 375691 tgaatgtgttatc-aacatggccaagtgga-ctga-ggctgcaggtggacttagggttggtaa s panTro4.chr17 95587 60 + 82630442 tgaatgtgttatc-aacatggccaagtgga-ctga-ggctgcaggtggacttagggttggtaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3490305 60 - 17838096 tgaaggtgttatc-aacatggccaagcgga-ctga-ggctgcaggtggacttagggttggtaa i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 30612 61 + 80904711 ggaatgtgtcatc-aacacggccaggcggagctga-ggctgcaggtggagttacggttcgtaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 30169 61 + 80997621 ggaatgtgtcatc-aacacggccaggcggagctga-ggctgcaggtggagttacggtccgtaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42285 61 + 74645514 GGAATGTGTCATC-GACACGGCCAAGCGGAGCCGA-GGCTGCAGGTGGAGTTACGGTTCGCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34610 61 + 75148670 ggaatgtgtcatc-aacatggccaagcggaactga-ggctgcaggtggagttagggttcgtaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 848067 60 - 1291538 tgaataggttctc-aacacatccaaggggagtgga-ggctgcaggtggagtt-gggttgttaa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75780443 63 + 122082543 CAGAGGTACTATCTGACACAGGGGAAGGGACCTGAGGGCAGAAGGTGAAACCGACACTGTTAT i mm10.chr11 C 0 C 0 e canFam3.chr9 15609427 239 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=336533.000000 s hg38.chr17_GL383563v3_alt 102346 164 + 375691 tgagctgacattagaatagggagattatcctagattgtt--gggtggcccaatgtggtcacagggttcttaaaagcagaagaat--ggacagagaagacagtca----gggacgtcaccaaggaagggggccagagagatgcaatggggcccgctgtgaaggtggaggaagg s panTro4.chr17 95647 154 + 82630442 tgagctgacattagaatagggagattatcctagattgtt--gggtgg----------tcacagggttcttaaaagcagaagaat--ggacagagaagacagtca----gggacgtcaccaaggaagggggccagagagatgcaatggggcccgctgtgaaggtggaggaagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3490365 164 - 17838096 cgagctgacattagaatagggagattatcctagattgtt--gggtggcccaatgtagtcacagggttcttaaaagcagaagaat--gggcagagaagagagtca----gggatgtcaccaaggaagggggccagagagatgcaatggggcccagtgtgaaggtggaggaagg i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 30673 164 + 80904711 caagctgacatcagaacggggagattatcctagactgtc--gggtggcccaatgtggtcaca-ggctcttcacagcagaaa-----gggcagagaagagagtcagagtgagacgtcaccaaggcaggcggccagagggatgcaacggggcctgctgtgagggcggaggaagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 30230 164 + 80997621 caagctgacatcagaacggggagattatcctagactgtc--gggtggcccaatgtggtcaca-ggctcttcacagcagaaa-----gggcagagaagagagtcagagtgagacgtcaccaaggcaggcggccagagggatgcaacggggcctgctgtgagggcggaggaagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42346 164 + 74645514 CAAGCTGACATTAGAAcagggagattatcctagatGGTC--GGGTGGCCCAATGTGGTCACA-GGTTCTTCACAGCAGAAA-----GGGCAGAGAAGAGAGTCAGAGTGAGACGTCACCAAGGCAGGCGGCCAGAGGGATGCAACGGGGCCTGCTGTGAGGGCGGAGGAAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 34671 160 + 75148670 caagctgacgttagaacagggagattatcctagattgtc--gggtggcccaatgtggtcacg-ggttcttcacagcagaaa-----gggcagaga--agagtcagagtgagacatcaccaaggcggg-ggccagagagatgcaacgggg-ctgctgtgaggacggaggaagg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 848127 166 - 1291538 caggctgatgttacaatagggagatgatcctggattgtct-aggtggcccagtgtggtcacagggtccttaaaagcagaag-----gagcagagaagaaagtcagactgagatgtcaccaaggaaggaggccagggagatgcaacagggcctgctgtgaaggtggagggagg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75780506 116 + 122082543 TTAGCTGACTTAAAACCAGCAAGCTTATTGGAGGCATTC--AAATAGCCC--TGTGGTCACAAGGTCACTAGCAGTAAAAG---------------TAGAGTCA----------------------------GGAGAG-----ACAGGGCCTGCT----CAGCTGGGGAAGT i mm10.chr11 C 0 I 1 s canFam3.chr9 15609666 161 - 61074082 tgggctgacttaaatgtacggagattatc-taggtgatctgggcaggtcccacgtgattatagggcctttgaaagcagaagagggaggcaggagaggagcatcagggggacacgtaaggagggagaggtaccaggtggaca---------ctggtg-gaaaatggaggaact i canFam3.chr9 I 239 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=380944.000000 s hg38.chr17_GL383563v3_alt 102510 314 + 375691 ggccacaagcccaggagggccgatggcctctagaagctggaaggagctaggaaactg-tgggctccccggg---ctccagaa-ggaatgcagccttgccgacaccttga-ttttagcccag--agagagacca--ctgctggacttctaacctgcagagcagtccgagagtaaacgcgctgctttaagccacgaagtttgtggtcatttgttgcagcagccgtaggaggctcatccaAGGAGGACCCCACCTCCAGCCC------GATGCCAC------------GGGGTA--GGTTCTGCAGGAGGCCTGTGTGGAACTGGAGTCTCCTTCCCAGGGCATTCC s panTro4.chr17 95801 312 + 82630442 gaccgcaagcccaggagggccaatggcctctagaagctggaaagagctaggaaactg---ggctccccggg---ctccagaa-ggaatgcagccttgccgacaccttga-ttttagcccag--agagagacca--ctgttggacttctaacctgcagagcagtccgagagtaaacgcgctgctttaagccacgaagtttgtggtcatttgttgcagcagccataggaggctcatccaAGGAGGACCCCACCTCCAGCCC------GATGCCAC------------GGGGTA--GGTTCTGCAGGAGGCTTGTGTGGAACTGGAGTCTCCTTCCCAGGGCATTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3490529 311 - 17838096 ggccacgagcccaggagggccgatggcctgtagaagctggaaagagctaggaaaccg-tgggctccccagg---ctccagaa-ggaacgcagccctgccgacaccttga-ttttagccc----agagagacca---tgttggacttctaacctgcagagcagtcagagagtaagtgtgctgctttaagccacgaagtttgtggtcatttgttgcagcagccataggaggctcatccaAGGAGGACCCCACCTCCAGCCC------GATGCCAC------------GGGGTA--GGTTCTGCAGGAGGCCTGTGTGGAACTGGAGTCTCCTTCCCAGGGCATTCC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 30837 239 + 80904711 ggccaggagcccaggagggtggacggcctccagaagctggaaagagctaggacatgggtgggctccccagg---ttccagaa-ggaacgcagccc----------------------------AGGGAGACCA--CGGTTGGACTTCTCACCTGCAGAGCAGGCAGAGAATGAG--------------------------------------------------GGAGGCTCATCCAAAGAGGACTCCACCTCCAGCCC------GAGGCCAT------------GGGGTG--GGGTCTGCAGGAGGCCTGTGTGGCACCGGA-TCTCCTCCCCAGGGCATTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 30394 239 + 80997621 ggccaggagcccaggagggtggacggcctccagaagctggaaagagctaggacatgggtgggctccccagg---ttccagaa-ggaacgcagccc----------------------------AGGGAGACCA--CGGTTGGACTTCTCACCTGCAGAGCAGGCAGAGAATGAG--------------------------------------------------GGAGGCTCATCCAAAGAGGACTCCACCTCCAGCCC------GAGGCCAT------------GGGGTG--GGGTCTGCAGGAGGCCTGTGTGGCACCGGA-TCTCCTCCCCAGGGCATTCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 34831 290 + 75148670 ggccaggggcccaggagggtggacggcctccagaagctggaaagagctaggacatggctgggctccccagg---ttccagaa-ggaacgcagccc----------------------------agggagacca--ctgctggacttctcacctgcagagcaggcagagaatgagggagctgctttaagccacgaagtttgtggccatttgttgcagcagccataggaggctcatccaAAGAGGACTCCACCTCCAGCCC------GAGGCCAT------------GGGGTG--GGTTCTGCAGGGGGCCTGTGTGGAACTGGAGTCTCCTTCCCAGGGCATTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 848293 303 - 1291538 -gccagta----cagagggtgggcggcctctagaagtcggaaagagccaggcaagaggtaggct-cccggg---ctccagaa-gaaatgcagccctgctgacaccttga-ttttagccc----agggagagca--cggttggactg-tcacctgcagagccgtcagagagtaagcgcgctgcttcaagccacgaggttcggggtcatttgctgcagcagccgtaagaggctcatccaAGGAGGGTCCTGCCTCCAGCCCCT----GACGCC-T------------GGGGTG--GGTTCTGCAGGAGGCCTGTGTGGAACCCGAGTCTCCTTCCCAGGG----CC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75780623 298 + 122082543 ---------------------TGCAGCCTCTA----TTTGGACAGGAGAGGGAATGA----------CTGT---CCCCAGAC-TGGACACAGTCCTGCTGGCATCTCGACTTCTGGTCCAGTCAGTCAGTGCAACCTGCCTGGCTGATGACCAGCAGACCAGGGAGGCAGGCGATGGGCATGTTTAAATGGCCAAGCG-GTGAGAACTTGTTGAGGTAACCACAGAAAATTAATGTGTGAAGCATCCTGCCCCCAGACT------CTGGCAACAGTAACAGAACAGAGGTGGTGGCTATGGGGTGGTCCTGTAGGGAATGGGAGGTTGCTCTGTGACTCATTCC i mm10.chr11 I 1 I 672 s canFam3.chr9 15609827 307 - 61074082 ggcca-gagttgagcgatgtgggtagcctctaggtgctggaaaaggatgggaattgc---ttctctcctggagcccccagaatggactgcagccc----cccacactgg-agttgacccg---ggtaggagct--gtgccag-cttcaaacctgcagcactggaagataagtaatgtg-tgtggcaagccactcagtt---gatgactggctactgcagccctaggacactaaAAGAGGAGGCTCCTCGCCTCCAGGTCCCTGTGTATGCT-T------------GGGGTGGAGGTTCTGCAGGAGGTGC---TGGGGCTGGA--CGCCCTCCCACATACCTCC i canFam3.chr9 C 0 C 0 e papAnu2.chr16 42510 0 + 74645514 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=444675.000000 s hg38.chr17_GL383563v3_alt 102824 280 + 375691 CTGCCTTTG--TGGACCGTCCCCTCTGCCTGGAACCCATCCCGTCCTTGGGTCTGCCTCGGGGGTGGCCTCTCCGAGCTGGAATATTGCTGCCACTCCCTCCTCCTGTGC--CAGCGGCTCTGAGCTCCTTGTCT----------------------GAATCGGTCTGATGCCTGCCACACCCGGC----------CCAGGCTGGGAGGTCAGACAGCCTGGGCTTCCAATTCC-----------------AGCTCTGTGGC--------------------------AGCATCAGGTTCCCCACTGT-GGAAAGGGCACAGGAATCCCTCTCTCCCATT---GCTTTCAGGAGC--TGTTTGTA s panTro4.chr17 96113 279 + 82630442 CTGCCTTTG--TGGACCGTCCCCTCTGCCTGGAACCCATCCCGTCCTTGGGTCTGCCTCGGGGGTGGCCTCTCCGAGCTGGAATATTGCTGCCACTCCCTCCTCCTGTGC--CAGCGGCTCTGAGCTCCTTGTCT----------------------GAATCGGTCTGATGCCTGCCACACCCGgc----------ccaggctgggagg-cagacagcctgggcttccaattcc-----------------agctctgtggc--------------------------agcatcaggttccccactgt-ggaaagggcacaggaatccctctctcctatt---gctttcaggagc--tgtttgta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3490840 281 - 17838096 CTGCCTTTG--CGGACTGTCCCCTCTGCCTGGAACCCGTCCTGTCCTCGGGCTTGCCTCGGGGGTGGCCTCTCTGAGCTGGAATATTGCCGCCACTCCCTCCTCCTGTGC--CAGCGACTCTGAGCTCCTTGTCT----------------------GAATTGGTCTGATGCCTGCCACACCCGgc----------ccaggctgggaggtcagacagcctgggcttccaattcc-----------------agctctgTGGC--------------------------AGCATCAGGTTCCCCACTGT-GGAAAGGGCACAGGAATCCCTCTCTCCCATT---GCTTTTGGGAGC-TTGTTTATA i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 31076 265 + 80904711 CTTCCTTTG--CGGACTGTCCCCTCTGCCTGGAACCCATCCTGTCCTCGGGCCGGCTC--AGGGTGGCCTCTCCGAGCTGGAATATTGCGGCCACTCCCTCCTCCTGTGC--CAGCGACTCTGAGCTCCTCGTCT----------------------GAGTCGGTCTGATGCCTGCCACGCCTGGC----------CCAGGCTGGGAGGTCAGACAGTCCGGGCTTCCAATGCC-----------------GGCTCTGTGGC--------------------------AGCATCAGGGTTCCCGCTGT-GGAAAGGCCATGGG-ATCCCTCTCTCCCGCT-----------------TGTTTATA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 30633 265 + 80997621 CTTCCTTTG--TGGACTGTCCCCTCTGCCTGGAACCCATCCTGTCCTCGGGCCGGCTC--AGGGTGGCCTCTCTGAGCTGGAATATTGCGGCCACTCCCTCCTCCTGTGC--CAGCGACTCTGAGCTCCTCGTCT----------------------GAGTCGGTCTGATGCCTGCCACGCCTGGC----------CCAGGCTGGGAGGTCAGACAGTCCGGGCTTCCAATGCC-----------------GGCTCTGTGGC--------------------------AGCGTCAGGGTTCCCGCTGT-GGAAAGGCCATGGG-ATCCCTCTCTCCCGCT-----------------TGTTTATA i macFas5.chr16 C 0 C 0 s chlSab2.chr16 35121 266 + 75148670 CTTCCTTCG--CGGACTGTCCCCTCTGCCTGGAACCCATCCTGTCCTCGGGCCGGCTC--AGGGTGGCCTCTCCGAGCTGGAATATTGCCGCCACTCCCTCCTCCTGTGC--CAGCGACTCTGAGCTCCTCGTCT----------------------GAGTCAGTCTGATGCCTGCCACGCCCGGC----------CCAGGCTGGGAGGTCAGACAGTCTGGGCTTCCAATTCC-----------------AGCTCGGTGGC--------------------------AGCGTCAGGGTTCCCGCTGT-GGAAAGGCCACGGGCATCCCTCTCTCCCGCT-----------------TGTTTATA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 848596 278 - 1291538 CTGCCTTTT--CGGACTGTCCCATCTGCCTGGAACCCATCCTGTCCTCCGGCATGCCTCGGGGGTGGCCTCTCTGAGCTGGAATGTTACAGCCACTCCGTCCTCCTGAGC--CATCGACTCTGAGCTCCATGTTT----------------------GAATTGGCCTGATGCCTGCCACGCCCagc----------ccaggctgggaggtcag-cagccccggcttccaattcc-----------------aggtctgTGGC--------------------------AGCATCGGGTTCCACAGCAC-GGACAGGGCACAGGAATCCCTCTCAC--ATT---GCTTTCTGGACC-TTGTTTACA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15610134 359 - 61074082 TTGCCTTTGCCCAGGCCCTGCCCTCCACCTGGAATGCCATCTCTCCTAGAAATGCCTG--TGGGTGGTACGTCCCAGCTGCCACACTGCCTCCCCTCC-TCTCTCTGGGCTTCTGCAGCTCCGGG-TCCTCATATTCCTCACTGTGCTGCCCATTTAGACTCAGCCCCATGCCGGCCTCCCCTTGCTGTCTGCCGGCCTggctctggggtcagacaggcctgggtccccaggccgctccatcccttgcctaagctctgtggagcccagcaggttacttatcctctgtgggcatcaggttctccactataaaaaagggcataataatacctctttctcagcatggttttcaggaGCCTTCTTTA-- i canFam3.chr9 C 0 I 194 e mm10.chr11 75780921 672 + 122082543 I e papAnu2.chr16 42510 0 + 74645514 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=288843.000000 s hg38.chr17_GL383563v3_alt 103104 157 + 375691 AGGAGACTGCTCTTTATAAAACACT------AGGGAAAGTCCTGGG---------GACTTCCTACAACTCGGCAGCCATGCACTGCCGGCTCCA-GTCCCACAAATGAAGGGT-------CACTGA-------------GCACACTTCCCTGGTCATACTCGCCCTCGGCCCTCATATCCCTGAG---CCCTTCTT s panTro4.chr17 96392 157 + 82630442 aggaGACTGCTCTTTATAAAACACT------AGGGAAAGTCCTGGG---------GACTTCCTACAACTCGGCAGCCACGCACTGCTGGCTCCA-GTCCCACAAATGAAGGGT-------CACTGA-------------GCACACTTCCCTGGTCATACTCGCCCTCGGCCCTCACATCCCTGAG---CCCTTCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491121 170 - 17838096 AGGAGGCTGCTTTTTCTAAAACACT------AGGGAAAGTCCTGGG---------GACTTCCTACAACTCGGCAGCCAGGCACTGCCGGCTCCA-GTCCCACAAATGAAGGGT-------CGCTGAGCTCCCGCGTGGGGCACACTTCCCTGGTCATACTCGCCCTCGGCCCTCACATCCCTGAG---CCCCTCTT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 31341 170 + 80904711 AGGAGACTGCTCTTGATAAAACACT------GGGGAAAATCCTGGG---------GACTTCCTACAACTCGGCAGCCAGGCACTGCCGGCTCCA-GTCCCACAAATGAGGGGT-------CACTGAGGTCCCACGTGGGGCACACTTCCCTGGTCACACTCGCCCTCGGCCCTCACATCCCCGAG---CCCCTCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 30898 170 + 80997621 AGGAGACCGCTCTTGATAAAACACT------GGGGAAAATCCTGGG---------GACTTCCTACAACTCGGCAGCCAGGCACTGCCGGCTCCA-GTCCCACAAATGAGGGGT-------CACTGAGGTCCCACGTGGGGCACACTTCCCTGGTCACACTCGCCCTCGGCCCTCACATCCCCGAG---CCCCTCTG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 35387 170 + 75148670 AGGAGACTGCTCTTGATAAAACACT------GGGGAAAATCCTGGG---------GACTTCCTACAACTCAGCAGCCAGGCACTGCCGGCTCCA-GTCCCACAAATGAGGGGT-------CACTGAGCTCCCACGTGGGGCACACTTCCCTGGTCACACTCGCCCTCGGCCCTCACGTCCCCGAG---CCCCTCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 848874 165 - 1291538 AGGAGACCACACTTTATAAAACACT------AGGG--AGTCCTGGG---------AACCTCCTACAATGCAGCAGCCAGGCACTGCCAGCTCCA-GTCCCACAAATGAGGGGA-------CCCTGAGCTCCTGTGTCAGGTAGACGTCCCCGGTCACACTCGCCCT-GGCCCTCACA-CCCCGAG---CCCACCT- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15610687 193 - 61074082 AGGAGACTGCTTTTTATGAAACACTGCCTACGTGGGAAATCCTGTGCGTGTGGTAAGGTCCCTAGGACT-AGCTTTCCAGCACTGTCAATTTGAGGTCCCATGAATCTAGGGACTCACAGCATTGAGTTCCTGAGTTAGGGACACTCCCCTGGTCATAGT-GCCCTCAGCCTTCAGCGCCCTGGGAGTCCCACCT- i canFam3.chr9 I 194 C 0 e mm10.chr11 75780921 672 + 122082543 I e papAnu2.chr16 42510 0 + 74645514 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=372818.000000 s hg38.chr17_GL383563v3_alt 103261 159 + 375691 GCAGC--ATAAGGGCATCAAGACCC----GGTGTGGGGAGCCCATTTCTTCCCCAGGAGTAGGTGGTGGGGCACTGCCATTTCTCCTACAGTCCTGCCTTCCCTAGAGAAGGGGGAAGGGCCCCTTCT---GGGGTGGTCCTCCTGGGCTGCTGTGGGCCCCAGGCCT s panTro4.chr17 96549 159 + 82630442 GCAGC--ATAAGGGCATCAAGACCC----GGTGTGGGGAGCCCATTTCTTCCCCAGGAGTAGGTGGTGGGGCACTGCCATTTCTCCTACAGCCCTGCCTTCGCTAGAGAAGGGGGAAGGGCCCCTTCT---GGGGTGGTCCTCCTGGGCTGCTGTGGGCCCCAGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491291 159 - 17838096 GCAGC--ATAAGGGCATCAAGGCCC----GGTGTGGGGAGCCCATTTCTTCCCCAGGAGTAGGTGGTGGGGCACTGCCCTTTCTCCTACAGCCCTGCCTTCCCTAGAGAAGGGGGAAGGGCCCCTTCT---GGGGTGGTCCTCCTGGGCTGCTGTGGGCCCCAGGCCT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 31511 158 + 80904711 GCAGC--ATAAGGACGTCGAGGCCC----AGCATGGGGAGCCCATTTCTTCCCCAGGAGTAGGTGGTGGGGCGCTGCCGTTTCTCCCACAGCCCTGCCTTCCCGAGGGAAGGGGGAATGGTCCCTTCT---GGGGTGGGCCTCCTGGATGGCTGCGGG-CCCAGGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 31068 158 + 80997621 GCAGC--ATAAGGACGTCGAGGCCC----AGCGTGGGGAGCCCATTTCTTCCCCAGGAGTAGGTGGTGGGGCGCTGCCGTTTCTCCCACAGCCCTGCCTTCCCGAGGGAAGGGGGAATGGTCCCTTCT---GGGGTGGGCCTCCTGGATGGCTGCGGG-CCCAGGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42510 157 + 74645514 GCAGC--ATAAGGACGTCGAGGCCC----AGCGTGGGGAGCCCATTTCTTCcccaggaggaggtggtggggtgCTGCC-TTTCTCCCACAGCCCTGCCTTCCCGAGGGAAGGGGGAACGGCCCCTTCT---GGGGTGGGCCTCCTGGATGGCTGCGGG-CCCAGGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 35557 158 + 75148670 GCAGC--ATAAGGACGTCGAGGCCC----AGCGTGGGGACCCCATTTCTTCCCCAGGAGTAGGTGGTGGGGCGCTGCCGTTTCTCCTACAGCCCTGCCTTCCCGAGGGAAGGGGGAACGGCCCCTTCT---GGGGTGGGCCTTCTGGATGGCTGCGGG-CCCAGGCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 849039 148 - 1291538 ---GC--ATAAGGACATGGAGGCCCGCCTGGCATGTGGAGCCCATTTCTTCCTCAGGACTAGGTGGTGGGGCACTGCCATTTCTCCTACAGCCCTGTC-TCCCTAGAGAAGGGGG-ATGGCCCCTTCT---GAGCTGGTCCTCCTGGAC----------CCCAGGCCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15610880 151 - 61074082 ---GCCAATGAGGACA-CTAGGCCT----AGAGCGGGGAGCA----GCTTCTCTAGGCACAGGTGGTGGGCTGCTGCTGTTTCCCCAACAGCCCTGCACCCCC-----AAGAGGGAATCATCACCTCTGTCGGGGTGGCCCTCCTGCCTTGTGGGGAGCCTCAGCCCT i canFam3.chr9 C 0 I 767 e mm10.chr11 75780921 672 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=339622.000000 s hg38.chr17_GL383563v3_alt 103420 154 + 375691 ACCCATTTAGGCCTCCACGTAAACTCAGACTCTGccccatgaaattaaaaataaaacagcactgaagagtaggatgcacagaaggaagtctaattaagttctgactttccatggctcaaggtcaccttgatgcttttattt---aacagcaattttt s panTro4.chr17 96708 154 + 82630442 ACCCATTTAGGCCCCCACGTAAACTCAGACTCTGCCCCatgaaattaaaaataaaacagcactgaagtgtaggatgcacaaaaggaagtctaattaagttctgactttccatggctcaaggtcaccttgatgcttttattt---aacagcaattttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491450 154 - 17838096 ACCCATTTAGGCCCCCAGGTAAACTCAGACTCTGCCCCATGAAATTAAAAATAAAACAGCACTGAAGTGTAGGATGCACAGAAGGAAGTCTAATTAAGTTCTGATTTTCCATGGCTCAAGGTCACCTTGATGCTTTTATTT---AACAGCAATTTTT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 31669 152 + 80904711 ACCCATTTAGGCCCCCAAGTCAACTCAGACTCTGCCCCatgaaattaaacataaaacagcactgaagtgcacgatgcacagaaggaagtctaattaagttctgattttccacagctcgaggtcaccttgatgcttttgttt---aacagcaa--ttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 31226 152 + 80997621 ACCCATTTAGGCCCCCAAGTCAACTCAGACTCTGCCCCatgaaattaaacataaaacagcactgaagtgcacgatgcacagaaggaagtctaattaagttctgattttccacagctcgaggtcaccttgatgcttttgttt---aacagcaa--ttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42667 155 + 74645514 ACCCATTTAGGCCCCCAAGTCAACTCAGACTCTGCCCCATGAAATTAAACACAAAACAGCACTGAAGTGCACGGTGCACAGAAGGGAGTCTAACTAAGTTCTGATTTTCCGCAGCTCGAGGTCACCTGGATGCTTTTGTTTAACAACAGcaa--ttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 35715 152 + 75148670 ACGCATTTAGGACCCCAAGTCAACTCAGACTCTGCCCCAAGAaattaaaaataaaacagcactgaagtgcacgatgcacagaaggaagtctaattaagttctgattttccacagctcgaggtcaccttgatgcttttgttt---aacagcag--ttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 849187 152 - 1291538 ACCCATTTAGAGCCCCAAGTCAACTCAGA--CTGCCCCATGAAATTAAAAATAAAACAACACTGAAGTGTCAGATGCACAGAAGGAAGACTAATTGGGTTCTGATTCTCCACAGCTCAAGGTCACCTTGATGCTTTTATTT---AACAGCGACTTTT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75780921 672 + 122082543 I e canFam3.chr9 15611031 767 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=357242.000000 s hg38.chr17_GL383563v3_alt 103574 160 + 375691 ctctctcctgtccgagatgcacctgttgtgctggtgccctgagcacatgtgtggtcggacgcttgggtcatccggcGTAGGAATGA---------------------GGGGCAGATTctgcccacttcatcccccttgcggagagtcagggaacagcccatcaacacgttagatgctctga s panTro4.chr17 96862 160 + 82630442 ctctctccggtccgagatgcacctgttgtgctggtgccctgagcacatgtgtggtcggacgcttggggcatccggcGTAGGAATGA---------------------GGGGCAGATTctgcccacttcatcccccttgcggagagtcagggaacagcccatcaacacgttagatgctctga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491604 181 - 17838096 CTCTCTCCTCTCCTAGATGCACCTGTTGTGCTGGTGCCCTGAGCACATGTGCGGTTGGACGCTTGGGTCATCGGGCGTAGGAATGAGCAtcctgtggtcaaatatatggggcagattctgcccacttcatcccccttacagagagtcaaggaacagcccatcaacacattaaatgctctga i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 31821 172 + 80904711 ctctctcctctcctagatgcacctgttgtgctggtgccctttccacacgtgtggtcggactctt---------ggCGTAggaatgaggatcctgtggtcaaatatactgggcagattccgcccacttcatcccccttacggagagtcaaggaacagcccatcagcatgttaaatgctctga i rheMac3.chr16 C 0 I 8 s macFas5.chr16 31378 172 + 80997621 ctctctcctctcctagatgcacctgttgtgctggtgccctttccacacgtgtggtcggactctt---------ggCGTAggaatgaggatcctgtggtcaaatatactgggcagattccgcccacttcatcccccttacggagagtcaaggaacagcccatcagcatgttaaatgctctga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42822 172 + 74645514 ctctctcctctcctagATGCACCTGTTGTGCTGGTGCCCTTTCCACAAGTGTGGTCGGACTCTT---------GGCGTAGGAATGAGGATCCTGTGGTCAAATATACTGGGCAGATTCCGCCCACTTCATCCCCCTTACGGAGAGTCGAGGAACAGCCCATCAGCACGTTAAATGCTCTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 35867 170 + 75148670 ctctctcctctcctagatgcacctgttgtgctggtgccctttccac--gtgtggtcggactctt---------ggCATAggaatgaggatcctgtggtcaaatatactgggcagattccgcccacttcatcccccttacggagagtcaaggaatagcccatcaacacgttaaatgctctga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 849339 174 - 1291538 TTCCCT-CTCTCCTAGATGCACCTGTTGCGCTGGTGTCCTGAGTGCACGTGTGGTT-GACCCCCATGTCCTCCAGTGCAAGaacaaggatcctgttttcaaatatattgggcagatgctgcccattttatcctccttacggagagtcaaggagcaacccatcaacacattacatga----- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15611798 159 - 61074082 CTTTCTCTTTTCCCAGGTGCACCAA--GTGCT-------------------TAGTCTGCCCGCTGGGTCACCGAGTACAggaacaagggttctgtggcc-cccaaactgggcagcacctacccactccatctaccttgtgtagtgtcacagggtagcccacaaacattttaaaggctctga i canFam3.chr9 I 767 C 0 e mm10.chr11 75780921 672 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=23122.000000 s hg38.chr17_GL383563v3_alt 103734 75 + 375691 gaagtcctgtggtacagaaacctgtttaacaatgtttccccatgttatttaaccacagagtcctttgtttGCACC s panTro4.chr17 97022 75 + 82630442 gaagtcctgtggtacagaaacctgtttaacaatgtttccccatgttatttaaccacagagtcctttgtttGCACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491785 75 - 17838096 taagtcctatggtacagaaacctgtttaacaatgtttcccaatgttatttaaccacagaGTCCTTTGTTTGCACT i ponAbe2.chr17_random C 0 C 0 s macFas5.chr16 31550 8 + 80997621 taggtccg------------------------------------------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 42994 8 + 74645514 TAGGTCCG------------------------------------------------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 36037 8 + 75148670 taggtccg------------------------------------------------------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 849513 75 - 1291538 taagtcctatggtacagaaacctgcttcccaatgtttcccaatgttactgaaccacagagtcctccgtttGTACC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15611957 75 - 61074082 taagtcctagagtaaagacacctgtttaacaaggtttcccaatgttatttggccacagagcACCCCCCCCCCACC i canFam3.chr9 C 0 C 0 e mm10.chr11 75780921 672 + 122082543 I e rheMac3.chr16 31993 8 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=194787.000000 s hg38.chr17_GL383563v3_alt 103809 92 + 375691 -------TAATAGTAACTTCCAGCTGAGAATGCTTCTTATAAAATGCTGGCCTGGAAATTCTCCAG-GGGTTTCCCCAGATCAGCAGGTAGGTAACGC----TG s panTro4.chr17 97097 92 + 82630442 -------TAATAGTAACTTCCAGCTGAGAATGCTTCTTATAAAATGCTGGCCTGGAAATTCTCCAG-GGGTTTCCCCAGATCAGCAGGTAGGTAACGC----TG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491860 92 - 17838096 -------TAATAGTAACTTCCAGATGAGAATGCTTCTTATAAAATGCTGGCCTGGAAATTCTCCAG-GGGTTTTCCCAGATCAGCAGGTAGGTAACGC----TG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 32001 85 + 80904711 -------taatagtaacctCCAACTGAGAATGCGTCTTATAAAATGCTGGCCTGGAAATTCT------GGAATTCCCAGATCAGCAGGCAGGTAACGC------ i rheMac3.chr16 I 8 C 0 s macFas5.chr16 31558 85 + 80997621 -------taacagtaacctCCAACTGAGAATGCGTCTTATAAAATGCTGGCCTGGAAATTCT------GGAATTCCCAGATCAGCAGGCAGGTAACGC------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 43002 87 + 74645514 -------TAATAGTAACCTCCAACTGACACTGCTTCTTATACAATGCTGGCCTGGAAATTCT------GGAACTCCCAGATCAGCAGGCAGGTAACGCTG---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 36045 87 + 75148670 -------taatagtaacctCCAACCGAGAATGCTTCTTATAAAATGCTGGCCTGGAAATTGT------GGAATTCCCAGATCAGCAGGCAGGTAACGC--TG-- i chlSab2.chr16 C 0 I 9 s calJac3.chrUn_GL286409 849588 90 - 1291538 -------TAACAGTAACTTCCAGTTGCAAACGCTTCTCATCAAATGCAGGCCTGTAAATTCTCCAG-GGGTTCCCCCAGATCAGCAGGTAGGTAAGGC------ i calJac3.chrUn_GL286409 C 0 I 2 s canFam3.chr9 15612032 100 - 61074082 CCAAACACAATAGTAACCTCCAATCGAGTCTGCTTCTCATAAAATGCTGGCCTAGAAATTCTCTGGAGGGTTTCCCCAATTCATCAGGCAAGCGGTGC----TG i canFam3.chr9 C 0 C 0 e mm10.chr11 75780921 672 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=1365.000000 s hg38.chr17_GL383563v3_alt 103901 1 + 375691 A s panTro4.chr17 97189 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491952 1 - 17838096 A i ponAbe2.chr17_random C 0 C 0 s papAnu2.chr16 43089 1 + 74645514 A i papAnu2.chr16 C 0 I 8 s calJac3.chrUn_GL286409 849680 1 - 1291538 A i calJac3.chrUn_GL286409 I 2 C 0 s canFam3.chr9 15612132 1 - 61074082 A i canFam3.chr9 C 0 C 0 e mm10.chr11 75780921 672 + 122082543 I e chlSab2.chr16 36132 9 + 75148670 I e rheMac3.chr16 32086 0 + 80904711 C e macFas5.chr16 31643 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=34002.000000 s hg38.chr17_GL383563v3_alt 103902 50 + 375691 CTCGTGAGGTCCCCAGGAGGCA-ACAGGGTGTGGGGCAGACTGGGTGCTCT s panTro4.chr17 97190 50 + 82630442 CTCGTGAGGTCCCCAGGAGGCA-ACAGGGTGTGGGGCAGACTGGGTGCTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3491953 50 - 17838096 CTCGTGAGGTCCCCAGGAGGCA-ACAGGGTGTGGGGCAGACTGGGTGCTCT i ponAbe2.chr17_random C 0 C 0 s calJac3.chrUn_GL286409 849681 51 - 1291538 CACATGAGGTCCCCAGGAGGCATCCAGGCTGTGGGGCAGACCTGGTGCTCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15612133 49 - 61074082 --CCTGAGGTTCCCAGGAAGTCTGGGGGCTGTGGGGCTAACTGGGTGCTCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75780921 672 + 122082543 I e chlSab2.chr16 36132 9 + 75148670 I e papAnu2.chr16 43090 8 + 74645514 I e rheMac3.chr16 32086 0 + 80904711 C e macFas5.chr16 31643 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=343851.000000 s hg38.chr17_GL383563v3_alt 103952 153 + 375691 GTGTGCAGTTGAATGGCTGAGGTCCCATCAGCTTGCTTGGACTCTGAGGGG-AGTGGCAGCTGTGGGCCTCCCTGGGTGCCCGCAGCCCAGTCCAGGCCCCAAAGCAAAAGGACCAGAGTGCATTGCCTGAGGTGGTGGGCGGG-TGCAGCTGGT s panTro4.chr17 97240 153 + 82630442 GTGTGCAGTTGAATGGCTGAGGTCCCATCAGCTTGCTTGGACTCTGAGGGG-AGTGGCAGCTGTGGGCCTCCCTGGGTGCCCGCAGCCCAGTCCAGGCCCCAAAGCAAAAGGACCAGAGTGCATTGCCTGAGGTGGGGGGTGGG-TGCAGCTGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3492003 153 - 17838096 GTGTGCAGTTGAATGGCTGAGGTCCCGTCAGCTTGCTTGGGCTCTGAGGGG-AGTGGCAGCTGTGGGCCTCCCTGGGTGCCCCCAGCCCAGTCCAGGCCCCAAAGCAAAAGGACCAGAGTGCATTGCCTGAGGTGGTGGGTGGG-TGCAGCTGGT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 32086 144 + 80904711 ---------TGAACGGCTGAGGTCCCACCAGCTTGCTTGGGCTCTGAGGGG-AGTGGCAGCGGTGGGCCTCCCTGGGTGCCCCCAGCCCAGTCCAGGCCCCAAAGCCAAAGGACCAGTGTGCACTGCCTGAGGTGGTGGGGGGG-TGCCGCTGGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 31643 144 + 80997621 ---------TGAACGGCTGAGGTCCCACCAGCTTGCTTGGGCTCTGAGGGG-AGTGGCAGCGGTGGGCCTCCCTGGGTGCCCCCAGCCCAGTCCAGGCCCCAAAGCCAAAGGACCAGTGTGCACTGCCTGAGGTGGTGGGGGGG-TGCCGCTGGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 43098 153 + 74645514 GTGTGCAGCTGAACGGCTGAGGTCCCACCAGCTTGCTTGGGCTCTGAGGGG-AGTGGCAGCGGTGGGCCTCCCTGGGTGCCCCCAGCCCAGTCCAGGCCCCAAAGCCAAAGGACCAGTGTGCACTGCCTGAGGTGGTggggggg-TGCCGCTGGT i papAnu2.chr16 I 8 C 0 s chlSab2.chr16 36141 154 + 75148670 GTGTGCAGCTGAACGGCTGAGGTCCCATCAGCTTGCTTGGGCTCTGAGGGG-AGTGGCAGCGGTGGGCCTCCCTGGGTGCCCCCAGCCCAGTCCAGGCCCCAAAGCCAAAGGACCAGTGTGCACTGCCGGAGGTGGTGGGGTGGCTGCCGCTGGT i chlSab2.chr16 I 9 C 0 s calJac3.chrUn_GL286409 849732 125 - 1291538 GTGTGGAGGTGAATGGCTGAGGTCCCCTCAGCTTGCTTGGGCTCTGAGGGG-AGTGGCAGCTGTGGGCCTCCCTGGGTGCCCCCAGCCTAGTCCAGGCCCCATCACC----------------------------GTGGGCAGG-TGTAGCTGGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15612182 121 - 61074082 GGGTGGAGGTGAATCACGGAGATCCCATCAACTTGCTTGATCTGTGAGAGGCCATGGGAGGTATGCACCTCCTTGGGCATCCTGAGTTCAGCCTGGGCCCAAC----------CCAGCAGGCA------GAGTTGGC------------------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75780921 672 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=2062692.000000 s hg38.chr17_GL383563v3_alt 104105 873 + 375691 GGGCAGGCCT-GGG-TGGAACCCCTCACCTTACTGGCTCCTGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATTGGCTTCAGGCCCTGGGCAGA---GAACAGCAAACGGTGTGAACTGGAAATCGGGGACATGGAACTGACAGGGCCTGCAGATGCCCTTGTCCCCTGGG-TCTCCTG---------------GCTGGGCCCATTCATGGCCCCTTTCACAGAAGCCCCCGGGCCCCACACCTCCAGATGGAGGGAGTGAGGATGGCTCAACGCTGATGCAATCTCCCCTCCCCAAAACATCCTGGCCCAGGGCAGCTGTCATGGGGCCTCTGTCAGGA-CAGACTTT------CTCTTGTCCTCATCCT-GGAAGCCAGGTGGCTCCCCCTTCTCTGA----------GCCTCCCTCTCCACCCTGCTTTGCTCAGGCCCTGC-CATCATCCTGACTCCCGTCTCCCATCTACCAAGCGTGGCCTCCTGAGTGGCCATGCCCCTCACTGACCCTAAATCCACAT-AACCC--------------------------------------------CGGGACA------CAGTCC---------GAGACTAGG--------CCCCATTTCTGGCCATATTTGCCACAACTCCCAGTC------AGTCCACAGAGATCACACAAGCAGACTGGCCACAGAGGGTCCCTCCACAAGATGGCACCCCTCTCTCACTCTG------GTTCTTTCAGAAAACCCAGCCACGCGTGCACAGCCAGAG-------------GCAC-AC-------------------------------------AGAAGCATGGACAGAGAGGGGCTTTGCTGACCTCA-GCAGGCTCTTGTCTCTGAAAATTGCATTTGTTTCCTTCTGG----GATGGTGCACAGGGATG-----CAGGGAGGCAGCTGTGGCATCTGTGGGGGTGCAGCC-GGCAACCCCAGGATAGTATTCAAAG-----------------GGCT-TC-TACCCAGCCGGGTCAGGGAGGCAGCTCG s panTro4.chr17 97393 873 + 82630442 GGGCAGGCCT-GGG-TGGAACCCCTCACCTTACTGGCTCCTGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATTGGCTTCAGGCCCTGGGCAGA---GAAGAGCAAAGGGTGTGAACTGGAAATCGGGGAGATGGAACTGACAGGGCCTGCAGATGCCCTTGTCCCCTGGG-TCTCCTG---------------GCTGGGTCCATTGATGGCCCCTTTCACAGAAGCCCCCGGGCCCCACACCTCCAGATGGAGGGAGTGAGGATGGCTCAATGCTGGTTCAATCTCCCCTCCCCAAAACATCCTGGCCCAGGGCAGCTGTCATGGGGCCTCTGTCAGGA-CAGACTTT------CTCTTCTCCTCATCCT-GGAAGCCAGGTGGCTCCCCCTTCTCTGA----------GCCTCCCTCTCCACCCCGCTTTGCTCAGGCCCTGC-CATCATCCTGACTCCCGTCCCCCAACTACCAAGCATGGCCTCCTGAGTGGCCACGCCCCTCACTGACCCTAAATCCACGT-AACCC--------------------------------------------CGGGACA------CAGTCC---------GAGACTAGG--------CCCCACTTCTGGCCATATTTGCCACAACTCCCAGTC------AGTCCACAGAGATCACACAAGCAGACTGGCCACAGAGGGTCCCTCCACAAGATGGCACCCCTCTCTCACTCTG------GTTCTTTCAGAAAACCCAGCCACGCGTGCACAGCCAGAG-------------CCAC-AC-------------------------------------AGAAGCATGGACAGAGAGGGGCTTTGCTGACCTCA-GCAGGCTCTTGTCTCTGAAAATTGCATTTGTTTCCTTCTGG----GATGGTCCACAGGGATG-----CAGGGAGGCAGCTGTGGCATCTGTGGGGGTGCAGCC-GGCAACCCCAGGATAGTATTCAAAG-----------------GGCT-TC-TACCCAGCCGGGTCGGGGAGGCAGCTCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3492156 886 - 17838096 GGGCAGGCCT-GGG-TGAAACCCCTCACCTTACTGGCTCCCGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATCGGCTTCAGGCCCTGGGCAGA---GAACAGCAAAGGGTGTGAACTGGAAATCGGGGAGGTGGGACTGACAGGGCCGGCAGGTGCCCTTGTCCCCTGGG-TCTCCTG---------------GCTGGGTCCCTTCATGG-CCCTTTCACAGAAGCCCCCAGGCCCCACACCTCCAGATGGAGGGAGTGAGGATGGCTCAATGCCGGTGCAATCTCCCCTCCCCAAAACATCCTGGCCCAAGGCAGCTGTCATGGGGCCTCCGTCAGGA-CAGACTTT---CTCCTCTTCTCCTCATCCT-GGAAGCCAGGTGGCTCCCCCTCCTCTGA----------GCCTCCCTCTCCATCCCGCTTTGCTCAGGCCCTTC-CATAACCCTGACTCCCCTCCCCCATCTTCCAAGCATGGCCTCCTGAGTGGCCACGCCCCTCACTGACCCTAAATCCCTGT-AACCC--------------------------------------------CGGGACA------CGGTCC---------CAGACTAGG--------CCCCATTTCTGGCCATATTTGCCACAACTCCCAGTC------AGTCCGCAGAGATCACACAAGCAGACTGGCCACAGAGGGTCCCTCCACAAGATGGCACCCCTCTCTCACTCTG------GTTCTTTTAGAAAACCCAGCCACGCGTGCACAGCCAGAG-------------GCAC-AC-------------------------------------AGAAGCATGGACAGAGAGGGGCTTTGCTGACCTCA-GCAGGCTCTTGTCTCTGAAAATTGCATTTGTTTCCTTCTGG----GATGGTGCACAGGGATG-----CAGGGAGGCAGCTGCGGCATCCGTGGGGGTGCAGCC-AGCAACCCCAGGACAGTATTCAAAGGTGCAC------CACAAGGCT-TC-TACCCAGCTGGGTCGGGCAGGCAGCGTG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 32230 851 + 80904711 GGGCAGGCCT-GGG-TGAAACCCCTCACCTTACTGGCTCCTGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATCGGCTTCAGGCCCTGGGCAGA---GAACAGCAAAGGGTGTGAAGCAGAAATCGGGGAGATGGAACGGACAGGGCCTGCAGGTGCCTGGGCCAGCAGAT-ACCCTTGTCC------------GCCGGGTCCATTCATGGCCCCTTTCACAGAAGCCCCCAGGCCCCACCCCTCCAGAT----GGAATGAGGATGGCTCGATGCCAGTGCAATCTCCCCTCCCCAAAACATCCCGGCCCAGGGCAGCTGTCATGGGGCCTCCGTCAGGA-CAGACTTT----TTCTCTTCTCCTCATCCG-GGAAGCCACATGGCTCACCCTCCTCTGA----------GCCTCCCTCCCCACCCCGCTTTGGTCAGGTCCTTC-CATCGTCCTGACTCCCCTCCCCCATCTTCCCAGCATGGCCTCCTGAGTGGTCACGCCCCCCATCGACTCTAAATCCACGT-AACCC--------------------------------------------CGGGACA------CGGTCC---------GAGACTAGG--------CCCCATTTCTGGCCATATTTGCCACAACTCCCAATC------AGTCCACAGAGATCACACAAGCGGACTGGCCACAGAGGGACCCTCCACAAGATGGCTCCCCTCACTCACTCTG------GTTCTTTCAGAAAACCTCGCCACGCGCGCACAGCCAGAG-------------------------------------------------------------GCACGGACAGACGGGGGCCTTGCTGACCTCA-GCAGGCACCTGTCTCCGAAAACTGCATTTATTTTCTTCTGG----CATGGTGCTCA-GGATG-----CCGGGAG-----------------------GCAGCC-AGCAACCCCAGGACAGGATTCAAAGGTGCAG------GGCCAGGCT-CC-TACCCAGCAGGGTCCAGGAGGCGGCGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 31787 851 + 80997621 GGGCAGGCCT-GGG-TGAAACCCCTCACCTTACTGGCTCCTGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATCGGCTTCAGGCCCTGGGCAGA---GAACAGCAAAGGGTGTGAAGCGGAAATTGGGGAGATGGAACGGACAGGGCCTGCAGGTGCCTGGGCCAGCAGAT-ACCCTTGTCC------------GCCGGGTCCATTCATGGCCCCTTTCACAGAAGCCCCCAGGCCCCACCCCTCCAGAT----GGAATGAGGATGGCTCGATGCCAGTGCAATCTCCCCTCCCCAAAACATCCCGGCCCAGGGCAGCTGTCATGGGGCCTCCGTCAGGA-CAGACTTT----TTCTCTTCTCCTCATCCG-GGAAGCCACATGGCTCACCCTCCTCTGA----------GCCTCCCTCCCCACCCCGCTTTGGTCAGGTCCTTC-CATCGTCCTGACTCCCCTCCCCCATCTTCCCAGCATGGCCTCCTGAGTGGTCACGCCCCCCATCGACTCTAAATCCACGT-AACCC--------------------------------------------CGGGACA------CGGTCC---------GAGACTAGG--------CCCCATTTCTGGCCATATTTGCCACAACTCCCAATC------AGTCCACAGAGATCACACAAGCGGACTGGCCACAGAGGGTCCCTCCACAAGATGGCTCCCCTCACTCACTCTG------GTTCTTTCAGAAAACCTCGCCACGCGTGCACAGCCAGAG-------------------------------------------------------------GCACGGACAGACGGGGGCCTTGCTGACCTCA-GCAGGCACCTGTCTCCGAAAACTGCATTTATTTTCTTCTGG----CATGGTGCTCA-GGATG-----CCGGGAG-----------------------GCAGCC-AGCAACCCCAGGACAGGATTCAAAGGTGCAG------GGCCAGGCT-CC-TACCCAGCAGGGTCCAGGAGGCGGCGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 43251 851 + 74645514 GGGCAGGTCT-GGG-TGAAACCCCTCACCTTACTGGCTCCTGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATCGGCTTCAGGCCCTGGGCAGA---GAACAGCAAAGGGTGTGAAGTAGAAATCGGGGAGATGGAACGGACAGGGCCTGCAGGTGCCTGGGCCAGCATAT-ACCCTTGTCC------------GCCGGGTCTATTCATGGCCCCTTTCACAGAagcccccaggccccacccctccAGAT----GGAATGAGGATGGCTCGATGCCAGTGCAATCTCCCCTCCCCAAAACATCCCGGCCCAGGGCAGCTGTCATGGGGCCTCTATCAGGA-Cagacttt----ttctcttctcctcatcCG-GGAAGCCACATGGCTCACCCTCCTCTga----------gcctccctccccaccccgctTTGGTCAGGTCCTTC-CATCGTCCTgactcccctcccccatcttCCCAGCATGGCCTCCTGAGTGGTCACGCCCCTCATCGACTCTAAATCCACGT-AACCC--------------------------------------------CGGGACA------CGGTCC---------AAGACTAGG--------CCCCATTTCTGGCCATATTTGCCACAACTCCCAATC------AGTCCACAGAGATCACACAAGCGGACTGGCCACAGAGGGTCCCTCCACAAGATGGCTCCCCTCACTCACTCTG------GTTCTTTCAGAAAACCTCGCCACGCATGCACAGCCAGAG-------------------------------------------------------------GCACGGACACACGGGGGCTTTGCTGACCTCA-GCAGGCACCTGTCTCCGAAAactgcatttgttttcttctgg----gatGGTGCTCA-GGATG-----CAGGGAG-----------------------GCAGCC-AGCAACCCCAGGACAGGATTCAAAGGTGCAG------GGCCAGGCT-CC-TACCCAGCAGGGTCCAGGAGGCGGCGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 36295 863 + 75148670 GGGCAGGCCT-GGG-TGAAACCCCTCACCTTACTGGCTCCTGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATCGGCTTCAGGCCCTGGGCAGA---GAACAGCAAAGAGTGTGAAGCGGAAATCGGGGAGATGGAACGGACAGGGCCTGCAGGTGCCTGGGCCAGCAGAT-ACCCTTGTCC------------GCCGGGTCCATTCATGGCCCCTTTCACAGAAGCCCCCAGGCCCCACCCCTCCAGATGGAGGGAGTGAGGATGGCTCGATGCCAGTGCAATCTCCCCTCCCCAAAACATCCCAGCCCAGGGCAGCTGTCACGGGTCCTCCGTCAGGA-CAGACTTT----TTCTCTTCTCCTCATCCG-GGAAGCCA-GGAGCTCACCCTCCTCTGA----------GCCTCCCTCCCCACCCCGCTTTGGTCAGGTCCTTC-CATCGTCCTGACTCCCCTCCCCCATCTTCCCAGCATGGCCTCCTGAGTGGTCACGCCCCTCATCGACCCTAAATCCACGT-AACCC--------------------------------------------CGGGACA------CGGTCC---------GAGACTAGG--------CCCCATTTCTGGCCATATTTGCCACAACTCCCAATC------AGTCCACAGAGATCACACAAGCCGACTGGCCACAGAGGGTCCCTCCACAAGATGGCTCCCCTCACTCACTCTG------GTTCTTTCAGAAAACCTCGCCACGCACGCACAGCCAGAG-------------GCAC-AC-------------------------------------AGAAGCACGGACAGATGGGGGCTTTGCTGACCTCA-GCAGGCACCTGTCTCCGAAAACTGCAGTTGTTTTCCTCTGG----GATGGTGCTCA-GGATG-----CCGGGAG-----------------------GCAGCC-AGCAACCCCAGGACAGGATTCAAAGGTGCAG------GGCCCGGCT-CC-TACCCTGGAGCCT-GGGGAGGCGGCGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 849857 914 - 1291538 GGGCAAGGCT-GCG-TGAAACCCCTCACCTTACTGGCTCCGGGCAGCAGGTGCAGCTTGACGTAGGGGTCTGCCAGCCCATTGTGGTCCATCGGCTTCAGGCCCTGGGCAGA---GAACAGCAAAGGGTGTAAACTGGAAATCAGGGAGATGGA---------GCCTGCAGGTGCCCTTGTCCCCTGGG-TTTCCTG---------------GGTGGGGCCACTCATGGCCCCTTTCACAGAAGACCCCAGACCCCGCACCTCCAGACAGAGGGAGCGAGGACAGCTCAGGGCCAGTGTAATCTCCCCTCCTGCTAACATCCTGGCCCAGGGCAGCTGTCA-GGGACCTTTGTCAGGA-CAGACTTT---CTCTTTCTCTTCTCTCCCT-GGAAGCCAGGTGGCTCCCCTTCCTCGGA----------GCCTCCCTCCCCACCCT-CTGTGGCCAAGCCCTTC------TCCTAACTCCCCTCCCCCATCTTCTGAGCACGGCCTCCTGAGTGGCCAAGTACCTCACTGACCCTAAATCCACAT-AACCC--------------------------------------------CGGGACA------CAGGCC---------GAGACCAGG--------CCCCACTTTGGGCCATATTTGCCACAACTCCCAGTC------AGTCCATGGAGGTCACACAA----ACTGGCCACAGA-AGTCCCTCCACAAGATGGCACCCCTCACTCACACTG------GTTTTTCTAGAAAACCCAGCCACGCGTGCACAGCTGGGGCACACAGAAGCATGCAC-ACACaaaaaaataaaaataaaaataaaaaataaataaaaaGAAGCATGCACACACAGGTTCTTTGCTGACCTCA-GCAGGCTCCTGTTTCTGAAAACTGCATTTTTTTTCTTCTGG----GCTGGTGCACAGGGATG-----TAGGGAGGCAGCTGTGGCATCTAAGAGGC-ACAGCT-GGCAACCCCAGGACATTATTCAAAGATGCAC------TGCAAGGCT-TC-TACCCAGCCAGGT-CAGCAGGCAGCATG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75781593 774 + 122082543 GGCCATGCCTGGGG-TAGAAACCCTCACCTTGCTGGCTCCAGGCAGCAGGTGTAGTTTGACGTAGGGATCAGCCAGTCCATTGTGGTCCATCGGCTTCAGGCCCTGAGTAGA---GACCAG-AGAGGGTGTGAGTT--------GAGAGAGGGGAAACAAGAGGCCTGCTGA----------------------------------------GCAGGG------------CCTCCTCTCTGACATTTCCAGTCTC----CCTGAAGAT--AAGGCCTAA--------CAGTGCTGGGGTGGCTTCCCTCTCCC---ACACTCTGGCC------------CCTGGGGCTTTTC----------ATTTC----TTACTTTCTTGACAAACT--GAACCCAGAAGACACACCTCACTCTAAACTTGGGGAGGCCTGTCTCTCT-CCCCACTTT--CCAGACACCACTCCTTGTTGGGTCTTCCCTCTCTGACCC------CAAGTCTCCATGATTGGCTGTACAC----TCATCCCTACATTCCTGTGGATGC--------------------------------------------TGGGAAGGCACTTCGGTCC---------GAGTCCGGGAGGTCAGCTGCCATTTCCTTCTGCATTTG---------CTGGTT------GGTGTCCCTAGAAGTCACCGGCTGCCT-GCCATGGAGTGTCCTTCCACAAGATGGCACCCCTTGATAACTTTGACTTCAGTTTCTTCCGCCAGCCCAG----GAATGTACAGCTTAGG---------------------------------------------------------GTAGG---GGACTCACAAGGGCTCAGCTAGCCT-------------------GGGAATTAAGTTTACTCCTTTCTGGTGCTGAAGGCCTATGGGGGTGGGGAATAGGGAG-----------------------GCAGCAGAGGTGTGCGTGGACTATATTC-CAGATGCACACGTCTGGAATGGCT-CCATTCCTGGCCAGATGGCtgtggtagtttg i mm10.chr11 I 672 I 243 s canFam3.chr9 15612303 897 - 61074082 TGACAGGCCT-GGGATGGACCCCCTCACCTTACTGGCTCCTGGCAGCAGATGCAGCTTGACATAGGGGTCTGCTAGCCCGTTGTGGTCCATCGGCTTCAGGCCCTGCGTGGAGGGGAACAGCAAAAGGTGTGAGATGGGAGCTGGAGACACAGAGCAGCCAGGGCCTCCAGGCACCTCGGTGGGCAGGTATCCCTTGTCCCTGGGCCTCCCAGCTGGGTCCATTCAAGACCCTCTCTGCATAGGCCCCCTGCGCCCATGCTCTCAGA-----ACAGTGAGGATGACCCAGGGCTGGTGCTCTC-CCCTTCCCCTCAGTGTCCTGGCCCAGGGCAGGTGTCATGGGATGTCTTTCAAGACCAGACTTTGTCTTTCTATTCTCCCTTTCTGTGGATGCCAGGTGACTCCTCCACCTCTGAAT--------GAGGTCCTCATTATCCTGCTTTGGTGTGGCCCTTC-CTTCTTCTGGATTCCCCTTCCCCCATTCCCCAACAGAGACTTC--------------CCTCACTGATCCCATGTCCACAT-GACCCTCTTGACTTTCTGTCCACTCACCTATAGATTTCCCTCTTTACCATGGGAAA------ATGTTCTGTGTCCTGGAGACCAGG--------CTCAATTTCTTTCTGGATTTGCCACAGCTCCCTGCCAGCCTAAGTCTAAGGAGGCCATACAACCTGGCTGGCCATGGAGGGTCCCTCCACAAGATGGCATCCCTCACTAACTTTG----------------AATAACCAGTCAAGTATGCACAGCCAGGG-------------ACCCGAT-------------------------------------GGAACCAGAAACAGACAGGGGCTTATCTGACCTCATGACTGCTCTTAGCTCTGAAAATTATACTCTTTTTCTTCTGC----GGTGGCACACAGACATG-----TAGGGAG-----------------------GCAGCT-GTGATATGTGTGGCA----TCACAGATGAGC------TGCCAAGTTGGC-TACTCA---------------------- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=501691.000000 s hg38.chr17_GL383563v3_alt 104978 209 + 375691 GCGGCTCACACCAGGCCCATCTCCAAGGGGAGGCTGGGGCTCCCTCCCAGGCCCACCCCACCTCGGTTTGA--CGGAGCTCTGGGGGATGCGG----------------CAGGGGCTTCCAA-CCACCTACTTCCCTGCcactggcaaaggg--cagaggtttgggggcctggctggcttgggctccaggctcagctcc--tgttcaccagctggga-agtggatgagttact s panTro4.chr17 98266 209 + 82630442 GCGGCTCACACCAGGCCCATCTCCAAGGGGAGGCTGGGGCTCCCTCCTAGGCCCACCCCACCTCAGTTTGA--CGGAGCTCTGGGGGATGCGG----------------CAGGGGCTTCCAA-CCACCTACTTCCCTGCcactggcaaaggg--cagaggtttgggggcctggctggcttgggctccaggctcagctcc--tgttcaccagctggga-agtggatgagttact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3493042 211 - 17838096 GCGGCTCACACCAGGCCCATCTCCAAGGGGAGGCTGGGGCTCCCTCCCAGGCCCACCCCACCTTGGTTTGA--CGGAGCTCTGGGGGATGCGG----------------CAGGGGCTTCCAA-CCACCTACTTTCCTGCCATTGCCaaaggg--cagaggtttgggggcctggctggcttgggttccaggctcagctcctgtgttcaccagctggga-agtggatgagttact i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 33081 203 + 80904711 GCTACCCACACCAGGCCCATCTCCAAGGGGAGGCTGGGGCTCCCGCCCAGGCCCACCCCACCCTGCTTCGA--TGGAGCTCTGGGGGATGCGG----------------------CTTCCAA-CCACCTACTTCCCTGCCACtggcaaaggg--cagaggtctgggggcctggctggcttgggttccaggctcagctcctgtgttcaccagctggga-agtggatgagtta-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 32638 203 + 80997621 GCTACCCACACCAGGCCCATCTCCAAGGGGAGGCTGGGGCTCCCGCCCAGGCCCACCCCACCCTGCTTCGA--TGGAGCTCTGGGGGATGCGG----------------------CTTCCAA-CCACCTACTTCCCTGCCACtggcaaaggg--cagaggtctgggggcctggctggcttgggttccaggctcagctcctgtgttcaccagctggga-agtggatgagtta-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 44102 209 + 74645514 GCTACCCACACCAGGCCCATCTCCAAGGGGAGGCTGGGGCTCCCGCCCAggcccaccccaccctgctttga--tGGAGCTCTGGGGGATGCGG----------------CAGGGACTTCCAA-CCACCTACTTCCCTGCCACTGGCAAAGGG--CAGAGGTCTGGGGGCCTGGCTGGCTTGGGTGCCAGGCTCAGCTCCTGTGTTCACCAGCTGGGA-AGTGGATGAGTTA-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 37158 209 + 75148670 GCTACCCACACCAGGCCCATCTCCAAGGGGACGCTGGGGCTCCCGCCCAGGCCCACCCCAGACTGCTTTGA--TGGAGCTCTGGGGGACGTGG----------------CAGGGGCGTCCAA-CCACCTACTTCCCTGCCACtggcaaaggg--cagaggtctgggggcctggctggcttgggttccaggctcagctcctgtgttcaccagctggga-agtggatgagtta-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 850771 209 - 1291538 GCTGCTCACACCA-GCCCATCTCCAA-GGGAGGCTGAGGCTCCCTGCCAGGCCCACCCTGCCTTGGTTTGA--CCGAGCCCTGGGGGATTCGG----------------TGGGAACTTCCAA-CCACCCACTTCTCTGACGCTGGCaaaggg--tggaggtgtgggggcctggctggcttgggttctgggctcagctcccatggtcaccagttggga-agtggatgagttact i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15613200 221 - 61074082 -------GGAGCAGACCCACCTCTAAGGAG-GACTGAGGCTCCCTCCT----CCCCCTGACCTTGGTTTGGTTTGGAGAGCTGGGGGAAGAGGAAGCTGAGATAGGAGGTGGGCTCCTCCAGTCCCCCCATGGCTCTACTCCTGggaaggagtacacagactttagagccaggctggctggggcccacatctctgctcctgcacttattagctgggagggtggaggagtgact i canFam3.chr9 C 0 C 0 e mm10.chr11 75782367 243 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=80235.000000 s hg38.chr17_GL383563v3_alt 105187 41 + 375691 ttgcacgctaagcctcagct--ttatcatctgttaaaggggtt s panTro4.chr17 98475 41 + 82630442 ttgcacgctaagcctcagct--ttatcatctgttcaaggggtt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3493253 41 - 17838096 ttgcacactaagcctcagct--ttatcgtctgttaaaggggTT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 33284 34 + 80904711 -------ctaagcctcagct--ttgtcatgtgtaaaagggggt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 32841 34 + 80997621 -------ctaagcctcagct--ttgtcatgtgtaaaagggggt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 44311 34 + 74645514 -------CTAAGCCTCAGCT--TTGTCATGTGTAAAAGGGggt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 37367 34 + 75148670 -------ctaagcctcagct--ttgtcatctgtaaaagggggt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 850980 40 - 1291538 ttgcat-ctaagcctcaact--ttgtcatctgcaaaatgggtt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75782610 42 + 122082543 ctgtaagccaa-cttcaattaaatgttgccttttataagagtt i mm10.chr11 I 243 C 0 s canFam3.chr9 15613421 37 - 61074082 ttgccc-cagagcctca-----gtgttatctataaaaggggtt i canFam3.chr9 C 0 I 356 e nomLeu3.chr19 81496740 0 + 81552678 I a score=1470323.000000 s hg38.chr17_GL383563v3_alt 105228 701 + 375691 ggccgggcacggtggctcacgcctgtaatcccagcgct-tgagcccaggagttcaagaccagcctgggcaacacagtaagaccctgtctcttcaaaaaact--aaaaaattagctgggtggggtggcatgtgcctgtggttccagcaactagagaagctgaggtgggaggatcgcttgaacctgggacacggaggctgcagtgaaccgtgatcgcaccactgca---ctccag---cctgggtgac-agagtgagaccc---tgtctcaag-tt--taaaaaaaaaaaaaaaaaaagggcgggggtg----taatactcccaccttcctagggctggagtgagAGGGA---GGGAGACTGTGTGGACACAGGGCCTGGCAGGCAGG-G--TTTGCTCCCTTCCCTGCACGCCAGGCCCCCGTGAGACGCCGGAGAAGCGGTTGAGGTCTGCTGGGTGCATCTGAGCTGTGCCCTGCACTGTGGGGCTGCCTCTGGGACAGGGCCTGGCTCAGTGGCCCAACACGTGCTCAAGGTGACAAGGCTGCTCTTCCAAACCCAACTCCCTCACCCT-GCCTTGCACCTTTCCCACCAAGTGCCTGAAGTGCAGAGTTCTGGGAATCTGGTGGCCTGGCCTGACCAGGAG--GTGCCTGACTGCTG-TGTCTTATTCTTACAGTCCTTATACATTTGTTTGTTGTAGCTTAAAATGTTTCCATTTGGGCCACGTTTC s panTro4.chr17 98516 703 + 82630442 ggcggggcaaggtggctcacgcctgtaatcccagtgct-tgagcccaggagttcaagaccagcctgggcaacacagtaagaccctgtctcttcaaaaaact--aaaaaattagctgggtggggtggcacgtgcctgtggttccagcaactagagaggctgaggtgggaggattgcttgaacctgggacacggaggctgcagtgaaccgtgatcgtaccactgca---ctccag---cctgggtgac-agagtgagaccc---tgtctcaag-ttaaaaaaaaaaaaaaaaaaaaaagggcaggggtg----taatactcccaccttcctagggctggagtgagaggga---gggagaccgtgtggacacagggcctggcaggcagG-G--TTTGCTCCCTTCCCTGCACGCCAGGCCCCCGTGAGACGCCGGAAAAGTGGTTGAGGGCTGCTGGGTGCATCTCAGCTGTGCCCTGCACTGTGGTGCTGCCTCTGGGACAGGGCCTGGCTCAGTGGCCCAACACATGCTCAAGGTGACAAGGCTGCTCTTCCAAACCCAACTCCCTCACCCT-GCCTTGCACCTTTCCCACCAAGTGCCTGAAGCGCAGACTTCTGGGAATCTGGTGGCCCGGCCTGACCAGGCG--GTGCCTGACTGCTG-TGTCTTATTCTTACAGTCCTTATACATTTGTTTGTTGTAGCTTAAAATGCTTCCATTTGGGCCACGTTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3493294 699 - 17838096 GCccgggcacggtggctcacgcctgtaaccccagcgct-tgagcccaggaattcaagaccagcctgggcaacatggtaagaccctgtctcttcaaaaaact--aaaaaattagctgggtggggtggcacgtgcctgtggttccagcaactagggaagctgaggtgggaggatcgcttgaacctgggacacggaggctgtggtgaaccgtgatcgcaccactgca---ctccag---ccggggtgac-agagtgagacct---tgtctcaaa-tt-----aaaaaaaaaaaaaaaaaGGGCAGGGGTG----TAATACTCTCACCTTCCTAGGGCTGGAGGGAGAGGGA---GGGAGACTGTGTGGACACAGGGCCTGGCAGGCAGG-G--TTTACTCCCTTCCTTGCACGCCAGGCCCCCGTGAGACACCGGAGAAGTGGTTGAGGTCTGGTGGGTGCATCTGAGCTGTGCCCTGCACTGTGGGGCTGCCTCTGGGACAGGGCCTGGCTCAGTGGCCCAACACGTGCTCAAGGTGACAAGGCTGCTCTTCCAAACCCAACTCCCTCACCCTGGCCTTGCGCCTTTCCCACCAAGTGCCTGAAGCGCAGAGTTCTGGGAATCTGGTGGCCCAGCCTGACCAGGCG--GTGCCTGACTGCTG-TGTCTTATTCTTACAGTTCTTATACATTTGTTTGTTGTAGCTTAAAATGTTTCCATCTGGGCCACGTTTC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 33318 698 + 80904711 ggccgggcacggtggctcatgcctgtaatcccagtgcc-tgagcccaggagttcaagaccagcctgggcaacaccgtaagaccctgtctcttcaaaaaact--aaaaaattagctgggt-gggtggcaagtgcctgtggttccagcaactagggaagctgaggtgggaggatcgcttgaacctgggatgcagaggctgcagtgaaccgtgatcgtaccactgca---ctccag---cctgggtgac---agtgagaccc---tgtctcaaa-tt--t------aaaaaaaaaaaaagggcaggggtataattaatagtcccaccttcctagggttggagtgagAGGGA----GGAGACCGTGTGGACACAGGGTCTGGCAAGCAAG-GCATTTGCTCTCTTCTCTGCATGCCAGGCACCTGGGAGATGCCGGAGAAGTGGCTGAGGTCCAGTGGGCGCACCTGAGCTGTGCCCTGCACTGTGACGCTGCCTCTGGGACAGGGCCTGGCTCAGTGGCCCAACATGTGCTCAAGGTGGCAAGGCTGCTCTTCCAAACTCAACTCCCTCACCCTGGCCTTGCGCCTTTCCCACCAAGTGCCTGAAGTGCGGAGTTCAGGGAATCTGGCGGCCCAGCCTGACCAGGGG--GTGCCTGACGGCTG-TGTCTTATTCTTACAGTTCTTATACATTCGTGTGTTGTAGCTTAAAATGTTTCCATTTGGGCCATGTTTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 32875 699 + 80997621 ggccgggcacggtggctcatgcctgtaatcccagtgct-tgagcccaggagttcaagaccagcctgggcaacaccgtaagaccctgtctcttcaaaaaact--aaaaaattagctgggt-gggtagcaagtgcctgtggttccggcaactagggaagctgaggtgggaggatcgcttgaacctgggatgcagaggctgcagtgaaccgtgatcgcaccactgca---ctccag---cctgggtgac---agtgagaccc---tgtctcaaattt--t------aaaaaaaaaaaaggggcaggggtataattaatagtcccaccttcctagggttggagtgagAGGGA----GGAGACCGTGTGGACACAGGGTCTGGCAGGCAAG-GCATTTGCTCTCTTCTCTGCATGCCAGGCCCCTGGGAGATGCCGGAGAAGTGGCTGAGGTCCAGTGGGCGCACCTGAGCTGTGCCCTGCACTGTGACGCTGCCTCTGGGACAGGGCCTGGCTCAGTGGCCCAACATGTGCTCAAGGTGGCAAGGCTGCTCTTCCAAACTCAACTCCCTCACCCTGGCCTTGCGCCTTTCCCACCAAGTGCCTGAAGTGCGGAGTTCAGGGAATCTGGCGGCCCAGCCTGACCAGGGG--GTGCCTGACGGCTG-TGTCTTATTCTTACAGTTCTTATACATTCGTGTGTTTTAGCTTAAAATGTTTCCATTTGGGCCATGTTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 44345 646 + 74645514 ggccgggcaccgtggctcatgcctgtaatcccagtgct-tgagcccaggagttcaagaccagcctgggcaacaccgtaagaccctgtctcttcaaaaaact--aaaaaattagctgggt-gggtggCAAGTTCCTGTGGTTCCAGcaactagggaagctgaggtgggaggatcgcttgaacctgggatgcagaggctgcagagaaccgtgatcgcgccactgca---ctccag---cctgggtgac---agcgagaccc---tgtctcaaa-tt--t---aaaaaaaaaaaaaaaagggcaggggtATAATTAATAGTCCCACCTTCCTAGGGCTGGAGTGAGAGGGA----GGAGACCGTGTGGACACAGGGTCTGGCAGGCAAG-GCGTCTGCTCTCTTCTCTGCATGCCAGGC------------------------------------------------------CCCTGCACTGTGACGCTGCCTCTGGGACAGGGCCTGGCTCA-TGGCCCAACATGTGCTCAAGGTGACAAGGCTGCTCTTCCAAACTCAACTCCCTCACCCTGGCCTTGCGCCTTTCCCACCAAGTGCCTGAAGTGCGGAGTTCCGGGAATCTGGCGGCCCAGCCTGACCAGGGG--ATGCCTGACGGCTG-TGTCTTATTCTTACAGTTCTTATACATTCGTGTGTTGTAgcttaaaatgtttccatttgggCCACGTTTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 37401 706 + 75148670 ggccgggcacggtggctcatgcctgtaat--cggtgct-tgagcccaggagttcaagaccagcctgggcaacactgtaagaccctgtcgcttcaaaaaactaaaaaaaattagctgggtggggtggcaagtgcctgcggttccagcaactagggaagctgaggtgggaggatcgcttgaacctgggatgcagaggctgcagagagccgtgatcgcaccactgca---ctccag---cctgggtgac-agagcaagaccc---tgtctcaaa-tt--t--aaaaaaaaaaaagaaaagggcgggggtataattaatagtcccgccttcctagggctggagtgagAGGGA---CGGAGACCGTGTGGACACAGGGTCTGGCAGGCAAG-GTGTCTGCTCTCTTCTCTGCACGCCAGGCCCCTGTGGGATGCCGGAGAAGTGGCCGAGGTCCAGTGGGGGCACCTGAGCTGTGCCCTGCACTGTGACGCTGCCTCTGGGGCAGGGCCTGGCTCAGTGGCCCAACATGTGCTCAAGGTCTCAAGGCTGCTCTTCCAAACTCAACTCCCTCACCCCGGCCTTGCGCCTTTCCCACCAAGTGCCTGAAGTGCCGAGTTCTGGGAATCTGGTGGCCCAGCCTGACCAGGGG--GTGCCTGACAGCTG-TGTCTTATTCTTACAGTTCTTATACATTCGTTTGTTGTAGCTTAAAATGTTTCCATTTGGGCCACGTTTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 851020 695 - 1291538 ggccgggagcagtggctcacacctgtaatcccagcactctgggcccaagagttcaagaccagtctgggcaacatagtaagaccctgtctcttc-aaaaact--aaaaaattagctgggcatggtggcccgtgcctgtggccccagctactatggaagctgagggggaaggattgcttaaacccgggaagcggaggctgcactgagccacgatcacgccactgca---ctccag---cctgggtgacaagagcgagaccc---tgtctcaaa-tt----------acaaaaaaaaaagggcaggggtg----taacggtcccaccttccttgggctggagtgagaggca---gggagacgatgtGGACACAGGGCCTGGCAGGCAGG-GC-AATGCTCCCTTGTCTGCACACCAGGT-CCTGCGAGGTGCCGGAGAAGCGGCTGAGGTCCAGGAGACGCATCTGAGCTGTGCCCTGCGCTGTGGGGCTGCCTCTCAGACGGGGCCTGGTTCAGTGGCCCCACGTGTGCCCAAGGTGACAAGGCTGCTCTTCCAAACCCAATTCCCTCACCCTAGCCTCGAGCCTTTCCCACCAAGTGCCTGAAGTGCAGAGTTCTGGGAATCT-GTGGCCCAGCCTGAGGGGGGAGTGTGCCCGACCGCTG-TGTCTTATTCTTAC-TTTCTTATACATTTGTTTGTTGTAGCTTAAAATGTTTTCATTTGGCCCATGTTTC i calJac3.chrUn_GL286409 C 0 I 9 s mm10.chr11 75782652 543 + 122082543 gccttgg---------------------tcatggcgcc-tg----------ttca----cagct---gtaaaaccctaaGACTGTGCCCC-----AGATCT-----------------------------TTCTTCCAGGTCCAGCT-CTA-------TGGGCTTGAAGGAGCTCT-------------CAGGTGGGGCACCCACCCATCATTTCTCTTCTGTGTGTCCCCAGGCCTCTGAACTTT-CTAGTTAGACTCAATAGTCTCAGC-TT--T-------------ATCACAGGGGAAGCGT-----TAAT-------CATTCCCACAGTCTGAGTGGAACAGAACAAGGAG-------GAATGCAGGTGTGGGCGAATGGGTGCGACTCCTCTCCCCTTT-----CCAGGCTCTCAGACAGTATCAGAGAAGTAGCTGGGTGAGGGTAGGG--ATTTAAGCTAGGCTCAGAGCTA-----------CTGAGGCTTGACCTGG---AG------GAAGTGTGTGTACCTTGATAATGGTGGCCATTCACACTC-ACTGCCAGATCCT--------------ACCCCCAGGGAGCTGCCCTGGGGGGGT-GGGGGATCTGGGGGCCCAGCCTCAGTAGGGG--ACAAATGTGGGTTTCTGTTTTATTTCTAC--TTCTTGCACATTTGCTTAT----GTTTACAACATTTTCA-------CGGGTTTC i mm10.chr11 C 0 C 0 e canFam3.chr9 15613458 356 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=667988.000000 s hg38.chr17_GL383563v3_alt 105929 373 + 375691 CTGACACGTTTCACTTACAAACCTTTGGGCCACCACATGTTCTGGCG-TATGTCTTTCCAGTGGCTCTGGTGGTCCCACCTCCG-TACCCCGAGACACCCGTGGGAGCTAGGCTGGGTCGAGGGGCGCTGTCATGCTGGGACGGGAGTGACGCCTGCTCTGTCCTTCAGACCCCGGGACTGTGACGAGGCCCCTGCTGCTG-CTCTCTACTCCTCCACCCGGCAGTTCCCTGA---------------GCACCCTGGGCAGCCACACATTTCGCCAAAAGCAA-AAGGACCAGCAGGCACTGCCTGAAGCCCTGTCACTGTGCTGCCACCAACTTCTGTGCCCAA--ACAGGCAGCTTCCCTGG-TCCTGACCCGGGGTTCCGCCAGTGCCTCCA- s panTro4.chr17 99219 373 + 82630442 CTGACACGTTTCACTTACAAACCTTTGGGCCACCACATGTTTTGCCG-TATGTCTTTCCAGTGGCTCTGGTGGTCCCACTTCCG-TACCCCGAGACACCCGTGGGAGCTAGGCTGGGTTGAGGGGCGCTGTCATGCTGGGACACGAGTGATGCCTGCTCTGTCCTTCAGACCCCGGGACTGTGACGAGGCCCCTGCTGCTG-CTCTCTACTCCTCCACCCGGCAGTTCCCTGA---------------GCACCCTGGGCAGCCACACATTTTGCCAAAAGCAA-AAGGACCAGTAGGCACTGCCTGAAGCCCTGTCACTGTGCTGCCACCAACTTCTGTGCCCAA--ACAGGCAGCTTCCCTGG-CCCTGACCCGGGGTTCCGCCAGTGCCTCCA- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3493993 372 - 17838096 TTGATGCATTTCACTTACAAACCTTTGGGCCACCAGAAGTTCTGGCG---TGTCTTTCCAGTGGCTCTGGTGGTCCCACCTCCG-TACCCTGAGACACCCGTGGGAGCTAGGCTGGGTCGAGGGGCGCTGTCATGCTGGGACAGGAGTGATGCCTGCTCTGTCCTCCAGACCCCGGGACTGTGACGAGGCCCCTGCTGCAGCCTCTCTACTCCTCCACCTGGCAGGTCCCTGA---------------GCACCCTGGGCAGCCACACATTTGGGCAAAAGCAA-AAGGACCAGCAGGTACTGCCTGAGGCCGTGTCACTGTGCTGCTACCAGCTTCTGTGCCCAA--ACAGGCAGCTTCCCTGG-CCCTGACCCGGGGTTCCGCCAGTGCCTCCA- i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 34016 370 + 80904711 TTGACACATTTCACTTACAAATCTTTGGGCCACCAGAAGTTCTGGC-----GTCTTTCCAGTGGCTCTGGTGGTCCCACCTCTG-TACCCGGAGACACCCGTGGGAGCTAGACTAGGTCAAGGGGCGCTCTCATGCTGGGACAGGAGTGACGCCTGCTCTGTCCTTCAGACCCCTGGACGGTGACGAGGCCCCTGCTGCTGCCTCTCTACTCCTCCACCCGGCAGGTCCCTGA---------------GCACCCTGGGCAGCCGCACATTTGGCCAAAAGCAA-AAGGACCAGTAGGCACTGCCTGAGGCCGTGTCACCGTGCTGCCACCAGCTTCTGTGCCCAAACACAGGCA-CTCCCCTGG-CCCTGACCT-GGGTTCCACCCACGCCTCCA- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 33574 370 + 80997621 TTGACACATTTCACTTACAAATCTTTGGGCCACCAGAAGTTCTGGC-----GTCTTTCCAGTGGCTCTGGTGGTCCCACCTCTG-TACCCGGAGACACCCGTGGGAGCTAGGCTGGGTCAAGGGGCGCTCTCATGCTGGGACAGGAGTGACGCCTGCTCTGTCCTTCAGACCCCTGGACGGTGACGAGGCCCCTGCTGCTGCCTCTCTACTCCTCCACCCGGCAGGTCCCTGA---------------GCACCCTGGGCAGCCGCACATTTGGCCAAAAGCAA-AAGGACCAGTAGGCACTGCCTGAGGCCGTGTCACCGTGCTGCCACCAGCTTCTGTGCCCAAACACAGGCA-CTCCCCTGG-CCCTGACCT-GGGTTCCACCCACGCCTCCA- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 44991 387 + 74645514 TTGACACATTTCACTTACAAATCTTTGGGCCACCAGAAGTTCTGGCG---TGTCTTTCCAGTGGCTCTGGTGGTCCCACCTCTG-TACCCGGAGACACCCGTGGGAGCTAGGCCGGGTCAAGGGGCGCTGTCATGCTGGGACAGGAGTGACGCCTGCTCTGTCCTTCAGACCCCTGGGCGGTGACGAGGCCCCTGCTGCTGCCTCTCTACTCCTCCACCCGGCAGGTCGCTGAGCACCCTGGGCAGCTGCACCCTGGGCAGCCGCACATTTGGCCAAAAGCAA-AAGGACCCGTAGGCACTGCCCGAGGCCGTGTCACCGAGCTGCCACCAGCTTCTGTGCCCAAACACAGGCA-CTTCCCCGG-CCCTGACCT-GGGTTCCACCCATGCCTCCA- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 38107 372 + 75148670 TTGACACATTTCACTCACAAATCTTTGGGCCACCAGAAGTTCTGGCG---TGTCTTTCCAGTGGCTCTGGTGGTCCCACCTCTG-TACCCGGAGACACCCGTGGGAGCTAGGCTGGGTCGAGGGGCGCTCTCATGCTGGGACAGGAGTGGCGCCTGCTCTGTCCTTCAGACCCCTGGAGGGTGACGAGGCCCCTGCTGCTGCCTCTCTACTCCTCCACGCGGCAGGTCCCTGA---------------GCATCCTGGGCAGCCGCACATTTGGCCAAAAGCAA-AAGGACCAGTAGGCACTGCCTGAGGCCATGTCACCGTGCAGCCACCAGCTTCTGTGCCCAAACACAGGCA-CTTCCCTGG-CCCTGACCT-GGGTTCCACCCGTGCCTCCC- i chlSab2.chr16 C 0 I 5 s mm10.chr11 75783195 349 + 122082543 -----TCTTTGCCCTTGTAGATCTTTGAGGCAGGAGA----CTGGCCAGAGATAGTGCAAATA--CATACCAGTCCAACTTCTGAGGCCCTGGGGCATCCACAAGGGCT-GGCTGGGACAGGGGCAGCTGTCATGCTAAGCTGGCAATGAGGTATGCTCTGCCCGTTGGCTCCCTAGTCTATGGTT-GGTCCCTGATGTTACTTTCACACCCGTCTACCTAGCAGGTCCCTGG---------------GCATCCCAGAGCACCACACACTGGTGTAGAAGAAGTAAGGGATGATGGGTTCAGCCAGAGGCTGGGTTCACACAATGACACTAGCT--------------CAGGCAGCATCCCTGTCCCCTGAGTCTAGGGTCTGC-----CCTGCAG i mm10.chr11 C 0 C 0 e canFam3.chr9 15613458 356 - 61074082 I e calJac3.chrUn_GL286409 851715 9 - 1291538 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=347176.000000 s hg38.chr17_GL383563v3_alt 106302 180 + 375691 CCTTCTGTGGGGCTGGCCTCCCACGGAGCCTGACCTC---TGTCCACGGAA----GGGGAAGGTCGGGAGGCTGTTTCCAG-----GGCAGGGAGCTGCTAGTGGGGCCCTTGGGCACATGCTCCCCAGCTTGGGAGTTGGCAAGAGACATAAACTGATCCCATGGT-TTAGGGGTGGGCCTCACGGGAGGtg s panTro4.chr17 99592 180 + 82630442 CCTTCTGAGGGGCTGGCCTCCCACGGAGCCTGACCTC---TGTCCACGGAA----GGGGAAGGTCGGGAGGCTGTTTCCAG-----GGCAGGGAGCTGCTAGTGGGGCCCTTGGGCACATGCTCCCCAGCTTGGGAGTTGGCAAGAGACATAAACTGATCCCATGGT-TTAGGGGTGGGCCTCACGGGAGGtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494365 180 - 17838096 CCCTCTGTGGGGCTGGCCTCCCACGGAGCCTGACCTC---TGTCCACGGAA----GGGGAAGGGCGGGAGGCCGTTTCCAG-----GGCAGGGAGCTGTTAGTGGGGCCCTTGGGCACACCCTCCCCAGCTTGGGAGTTGGCAAGAGACATAAACTGATCCCATGGT-TTAGGGGCGGGCCTCACAGGAGGtg i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 34386 160 + 80904711 -------------------CCCATGCAGCCTGACCTC---TGTCCACGGAA-----GGGAAGGGCAGGAGGCTGTTTGCAG-----GGGAGGGAGCTGTTAGTGGGGCTACTGGGCACACCCTCCCCAGCTTGGGAGCTCGCAAGAGACAGAAACTGGTCCCACGGT-TTAGGGCCGGGCCCCACGGGAGGtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 33944 160 + 80997621 -------------------CCCACGCAGCCTGACCTC---TGTCCACGGAA-----GGGAAGGGCAGGAGGCTGTTTGCAG-----GGGAGGGAGCTGTTAGTGGGGCTACTGGGCACACCCTCCCCAGCTTGGGAGCTCGCAAGAGACAGAAACTGGTCCCACGGT-TTAGGGCCGGGCCCCACGGGAGGtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 45378 160 + 74645514 -------------------CCCACGGAGCCTGACCTC---TGTCCACGGAA-----GGGAAGGGCAGGAGGCTGTTTGCAG-----GGGAGGGAGCTGTTAGTGGGGCTACTGGGCACACCCTCCCCAGCTTGGGAGCTCGCAAGAGGCAGAAACTGGTCCCATAAT-TTAGGGCCGGGCCCTACGGGAGGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 38484 178 + 75148670 CCCTCTGTGGGGCTGGCCTCCCACGGAGCCTGACCAC---TGTCCACGGAA-----GGGAAGGGCAGGAGGCTGTTTGCAG-----GGCAGGGAGCTGTTAGTGGGGCTACTGGGCACATCCTCCCC-GCTTGGGAGTTCGCAAGAGACAGAAACTGGTCCCACGGT-TTAGGGCCGGGCCCCACGGGAGGCg i chlSab2.chr16 I 5 C 0 s calJac3.chrUn_GL286409 851724 180 - 1291538 CCCTCTCGGGGGCTGGCCTCCCACGGAGCCTGACCTC---TGTCCATTGAG----GGAGAAGGGCAGGAGCCTGTTTCCAG-----GGCCAGGAGCTGCTAGTGGGGCTCTTCGGCAGACTCTCCCCAGCTAGGGAGTCCTCAAGAGACAGACACCGACACCGTGGG-TTAAGGGGAGGCCTCACCAGAGGtg i calJac3.chrUn_GL286409 I 9 C 0 s mm10.chr11 75783544 167 + 122082543 ---------GGG-------CCTACGTGGATAGCCCCCAGGAGCTGACTGAATCCAGGAGAGGGGAAGGAGGCTGTGCTCGGCCACAGGTAGGAA------AGGGGTTGTCTCAGGCAGATCCCATCAGCTTTTTGTGTTGCCAAGCGATAAAAGTAGGTGTCACTGTCCCAGAGATGGAC----AGGGAGATG i mm10.chr11 C 0 I 949 e canFam3.chr9 15613458 356 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=143934.000000 s hg38.chr17_GL383563v3_alt 106482 74 + 375691 acgtggtttggcggtgtccccacccaagtctcatctggagttgtactcccataattcctacaggttgtgggaag s panTro4.chr17 99772 74 + 82630442 acgtggtttggcggtgtccccacccaaatctcatctggagttgtactcccataattcctacaggttgtgggaag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494545 74 - 17838096 atgtggtttggcggtgtccccacccaaatctcatcttgagttgtactcccataattcatacagattgtgggaag i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 34546 74 + 80904711 ataaggtttggccgtgtccccacccaaatctcatcctgagttgtgctcccatcattcccacaggtggtgggagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 34104 74 + 80997621 ataaggtttggccgtgtccccacccaaatctcatcctgagttgtgctcccatcattcccacaggtggtgggagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 45538 74 + 74645514 ATAAggtttggccgtgtccccacccaaatctcatcctgagtTGTGCTCCCATCATTCCCACAGGTGGTGGGAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 38662 74 + 75148670 ataaggtttggcactgtccccacccaactctcatcctgagctgtgctcccatcattcccacaggtggtgggagg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 851904 72 - 1291538 atctggttagactgtgt-cccacccaaatctcatcttgaattgtac-cctaccattcccacatgttgggagaca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=8793.000000 s hg38.chr17_GL383563v3_alt 106556 5 + 375691 gaccc s panTro4.chr17 99846 5 + 82630442 gaccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494619 5 - 17838096 gaccc i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 34620 5 + 80904711 gaccc i rheMac3.chr16 C 0 I 46 s macFas5.chr16 34178 5 + 80997621 gaccc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 38736 5 + 75148670 gaccc i chlSab2.chr16 C 0 I 59 s calJac3.chrUn_GL286409 851976 5 - 1291538 ggtcc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e papAnu2.chr16 45612 0 + 74645514 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=16362.000000 s hg38.chr17_GL383563v3_alt 106561 38 + 375691 agcgggagataactgaatcacaaggggaggtttctccc s panTro4.chr17 99851 38 + 82630442 agtgggagataactgaatcacaaggggaggtttctccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494624 38 - 17838096 agtgggagatagctgaaccacaggggcaggtttctccc i ponAbe2.chr17_random C 0 C 0 s macFas5.chr16 34183 20 + 80997621 ------------------ggtcgggggaggcccctccc i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 851981 37 - 1291538 agtgggagataactgagtcacaggtggaggttccccc- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e chlSab2.chr16 38741 59 + 75148670 I e papAnu2.chr16 45612 0 + 74645514 C e rheMac3.chr16 34625 46 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=10482.000000 s hg38.chr17_GL383563v3_alt 106599 30 + 375691 agactgttcttgacgtagtgaatacgtctc s panTro4.chr17 99889 30 + 82630442 agactggtcttgaggtagtgaatacatctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494662 30 - 17838096 agactgttcttgtggtagtgaatacatctc i ponAbe2.chr17_random C 0 I 2 s macFas5.chr16 34203 30 + 80997621 acacggttcttgtgggaacgaatcagtctc i macFas5.chr16 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e calJac3.chrUn_GL286409 852018 0 - 1291538 C e chlSab2.chr16 38741 59 + 75148670 I e papAnu2.chr16 45612 0 + 74645514 C e rheMac3.chr16 34625 46 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=2717.000000 s hg38.chr17_GL383563v3_alt 106629 12 + 375691 acgagatctgat s panTro4.chr17 99919 12 + 82630442 acgagatctcat i panTro4.chr17 C 0 C 0 s macFas5.chr16 34233 12 + 80997621 acgagatctggt i macFas5.chr16 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e calJac3.chrUn_GL286409 852018 0 - 1291538 C e chlSab2.chr16 38741 59 + 75148670 I e papAnu2.chr16 45612 0 + 74645514 C e rheMac3.chr16 34625 46 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3494692 2 - 17838096 I a score=63784.000000 s hg38.chr17_GL383563v3_alt 106641 713 + 375691 gatctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActcttcttgacgtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActcttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctgatggtctGACActgttcttgaggtagtgaatacgtctcacgag s panTro4.chr17 99931 713 + 82630442 ggtctGACACTGTTCTTCAGGTACTGAATACGTCTCACGAGATCTCATGGCCTGACActgttcttgaggtagtgaatacgtctcacgagatctcacggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcacggtctGACACTCTTCTTGACGTAGTGAATACGTCTCACGAGATCTCACGGTCTGACACTCTTCTTGACGTAGTGAATACGTCTCACGAGATCTCACGGTCTGACACTCTTCTTGACGTAGTGAATACGTCTCACGAGATCTCACGGTCTGACActgttcttgaggtagtgaatacgtctcacgagatctcacggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgacgtagtgaatacgtctcacgagatctcatggtctGACACTGCTCTTGACGTAGTGAATACGCCTCACGAGATCTCATGGTCTGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActcttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggCCTGACActgttcttgaggtagtgaatacgtctcacgagatctgatggtctGACActgttcttgaggtagtgaatacgtctcacgag i panTro4.chr17 C 0 I 4600 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e calJac3.chrUn_GL286409 852018 0 - 1291538 C e chlSab2.chr16 38741 59 + 75148670 I e papAnu2.chr16 45612 0 + 74645514 C e rheMac3.chr16 34625 46 + 80904711 I e macFas5.chr16 34245 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3494692 2 - 17838096 I a score=41106.000000 s hg38.chr17_GL383563v3_alt 107354 444 + 375691 atctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctgatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcaggagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtct s panTro4.chr17 105244 444 + 82630442 ATCTCATGGTCTGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgacgtagtgaatacgtctcacgagatctcatggtctGACActcttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctcatggtctGACActgttcttgaggtagtgaatacgtctcacgagatctgatggtct i panTro4.chr17 I 4600 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e calJac3.chrUn_GL286409 852018 0 - 1291538 C e chlSab2.chr16 38741 59 + 75148670 I e papAnu2.chr16 45612 0 + 74645514 C e rheMac3.chr16 34625 46 + 80904711 I e macFas5.chr16 34245 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3494692 2 - 17838096 I a score=300.000000 s hg38.chr17_GL383563v3_alt 107798 1 + 375691 G s panTro4.chr17 105688 1 + 82630442 G i panTro4.chr17 C 0 C 0 s papAnu2.chr16 45612 1 + 74645514 G i papAnu2.chr16 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e calJac3.chrUn_GL286409 852018 0 - 1291538 C e chlSab2.chr16 38741 59 + 75148670 I e rheMac3.chr16 34625 46 + 80904711 I e macFas5.chr16 34245 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3494692 2 - 17838096 I a score=7184.000000 s hg38.chr17_GL383563v3_alt 107799 26 + 375691 ACActgttcttggggtagtgaataca s panTro4.chr17 105689 26 + 82630442 Atactgttcttgacgtagtgaatacg i panTro4.chr17 C 0 C 0 s papAnu2.chr16 45613 26 + 74645514 ACACGGTTCTTGTGGGAACGAAtcag i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852018 26 - 1291538 atactgttcctgtggcagtaagtcag i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e chlSab2.chr16 38741 59 + 75148670 I e rheMac3.chr16 34625 46 + 80904711 I e macFas5.chr16 34245 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3494692 2 - 17838096 I a score=3820.000000 s hg38.chr17_GL383563v3_alt 107825 4 + 375691 tctc s panTro4.chr17 105715 4 + 82630442 tctc i panTro4.chr17 C 0 C 0 s rheMac3.chr16 34671 4 + 80904711 tctc i rheMac3.chr16 I 46 C 0 s papAnu2.chr16 45639 4 + 74645514 tctc i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852044 4 - 1291538 tctc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e chlSab2.chr16 38741 59 + 75148670 I e macFas5.chr16 34245 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3494692 2 - 17838096 I a score=7652.000000 s hg38.chr17_GL383563v3_alt 107829 11 + 375691 acgagatctga s panTro4.chr17 105719 11 + 82630442 acgagatctga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494694 7 - 17838096 acgagat---- i ponAbe2.chr17_random I 2 C 0 s rheMac3.chr16 34675 11 + 80904711 acgagatctgg i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 45643 11 + 74645514 aggagatctgg i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852048 11 - 1291538 acaagctctga i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e chlSab2.chr16 38741 59 + 75148670 I e macFas5.chr16 34245 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=2710.000000 s hg38.chr17_GL383563v3_alt 107840 4 + 375691 tggc s panTro4.chr17 105730 4 + 82630442 tggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494701 4 - 17838096 tggt i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 34686 1 + 80904711 ---t i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 45654 1 + 74645514 ---t i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 38800 4 + 75148670 tggt i chlSab2.chr16 I 59 C 0 s calJac3.chrUn_GL286409 852059 4 - 1291538 tggt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e macFas5.chr16 34245 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=825813.000000 s hg38.chr17_GL383563v3_alt 107844 398 + 375691 ctgataaggggaaacccgttttccttggctctcattctctctcttgccaccaaacatgtgagaagtgcctttcactttcagccataactgtgaggtcttctcagccacgtgtaacggcaagtccaataaacctctttcctttataaattacacagtctcaggtatgtctttatcggcagcatgaaaatggactaatacaGGGAGGATGGGTGGAAGCGGCCCCGGGGGAGGCCCTGGCTGGTACTGGCACTGAGGGAAGAGATGGGGGGTCTGGCTTTGAGAGGAGAGCCTCTCCCCAAAAACCTAGCCCTGCCCCGCCCTGGGCCTCTCAGAGGCTGTTGCTGGTGAAGTGTTCAGAAGAGGAGCTTCCTAGTCtgaagtatcattcagcctg-aaaa s panTro4.chr17 105734 398 + 82630442 ctgataaggggaaacccgttttccttggctctcattctgtctcttgccaccaaacatgtgagaagtgcctttcactttcagccataactgtgaggtcttctcagccgcgtgtaacggcaagtccaataaacctctttcctttataaattacgcagtctcaggtatgtctttatcggcagcatcaaaatggactaatacaGGGGGGATGGGCGGAAGCGGCCCCGGGGGAGGCCCTGGCTGGTACTGGCACTGAGGGAACAGATGGGGGGTCTGGCTTTGAGAGGAGAGCCTCTCCCCAAAAACCTAGCCCTGCCCCGCCCTGGGCCTCTCAGAGGCTGTTGCTGGTGAAGTGTTCAGAAGAGGAGCTTTCTAGTCtgaagtatcattcagcctg-aaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3494705 391 - 17838096 ctgataaggggaaacccgttttccttggccctcattctctctcttgccatcaaacatgtgagaagtgcctttcacctcccaccataattgtgaggccttctcagccacgtggaacagcaagtccaataaacctctttcctttataaattacacagtctcaggtatgtctttatcggcagcgtgaaaatggactaaaacaGGGGGGATGGGCGGAGGCGGCCCCGGGGGAGGCCCTGGCTGGTACTGGCACTGAGGGAACAGATAGGGGGTCTGGCTTTGAGAGGAGAGCCTCTCCCCAAAACCCTAGCCCT-----GCCCTGGGCCTCTCAGAGGCCGTTGCTGGCGAAGTGTTCAGAA---GAACTTTCTAGTCtgaagtatcattcagcctgaaaaa i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 34687 393 + 80904711 ctgataaggggaaccccgtcttgcttggctctcattctgtcccctgccaccaaacatgtgagaagtgcctttcaccttccgccataactgtgaggccttcccggccacgtggaacggcaagtccaataaacctccttcctttatgaattacccagtctcaggcgtgtctttctcagcagcgtgaaaatggactcatacaGGCGGGATGGGCAGAGGAGG-CCCGGGGGAGGCCCTGGCTGGTCCTGGCACTGAGGGAACAGA-GGGGGGTCTGGCTTTGAGAGGAGAGCCTCTCCCCAAAACCCCAGGCCTACCCCGCCCTGGGCCTCTCAGAGACC--TGCTGGCCAAGTGTTCAG-AGAGGAGCTTTCTAGCCGgaagtaccattcggcctg-aaaa i rheMac3.chr16 C 0 I 18 s macFas5.chr16 34245 393 + 80997621 ctgataaggggaaccccgtcttgcttggctctcattctgtcccctgccaccaaacatgtgagaagtgcctttcaccttccgccataactgtgaggccttcctggccacgtggaacggcaagtccaataaacctccttcctttatgaattacccagtctcaggcgtgtctttctcagcagcgtgaaaatggactcatacaGGCGGGATGGGCAGAGGAGG-CCCGGGGGAGGCCCTGGCTGGTCCTGGCACTGAGGGAACAGA-GGGGGGTCTGGCTTTGAGAGGAGAGCCTCTCCCCAAAACCCCAGGCCTACCCCGCCCTGGGCCTCTCAGAGACC--TGCTGGCCAAGTGTTCAG-AGAGGAGCTTTCTAGCCGgaagtaccattcggcctg-aaaa i macFas5.chr16 C 0 I 1 s papAnu2.chr16 45655 393 + 74645514 ctGATCAGGGGAACCCCGtcttgcttggctctcattctgtccccTGCCACCAAACATgtgagaagtgcctttcacctgcCGCCATAACTGTGAGGCCTTCCCGGCCACGTGGAACGGCAAGTCCagtaaacctccttcctttatgaattacccagtctcagacgTGTCTGtctcagcagcgtgaaaatggactcatacagGCGGGACGGGCAAAGGAGG-CCCGGGGGAGGCCCTGGCTGGTCCTGGCACTGAGGGAACAGA-GGGAGGTCTGGCTTTGAGAGGAGAGCCTCTTCCCAAAACCCCAGCCCTACCCCGCCCTGGGCCTCTCCGAGACC--TGCTGGCGAAGTGTTCAG-AGAGGAGCTTTCTGGCCGGAAGCACCATCCagcctg-aaaa i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 38804 388 + 75148670 ctgataaggggaatcccgtcttgcttggctctcattctgtctcttgccaccaaacatgtgagaagtgcctttcaccttccgccataacggtgaggccttcccggccacgtggaacggcaagtccaacaaacctctttcctttatgaattacccagtctcaggcgtgtctttctcggcagcatgaaaatggactcatacaGGCGGGATGGGCAAAGGAGG-CCCGGGGGAGGCCCTGGCTGGTCCTGGCACTGAGGGAAC----GGGGGGTCTGGCTTTGAGAGGAGAGCCTCTCCCCAAAACCCCAGCCCTACCCCGCCCTGGGCCTCTCAGAGACC--TGCTGGCGAAGTGTTC---AGAGGAGCTTTCTAGCCGgaagtaccattcagcctg-aaaa i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 852063 390 - 1291538 ctgataaggggaaacccatcttgcttggatcccattctctctcttgccactaaacgtgtgagacgtgcctttcaccttccgccgtgactgtgaggcctccccagccttgtggaacgggaagtccgataatcctctttcctttataaattacccagtctcaggtatgtctctacgggccatgtg-aaacggatgaatacaGGAAGGATGGGCAGAGGCGGCCACGAGGAAGGCCCTGG------CCAGCACCAAGGGAACACATGGGGGCTCTGGCTTTAAGAGGACAGCCCCTCCCCAGAACCCCAGCCCTGCCC-GCACTGGGCCTCTCAGAGGCTGTTGCTGGCGAAGTGTTGAGGAGAGGAGCTTCCTAGTCTCAagtattattcagcctg-aaaa i calJac3.chrUn_GL286409 C 0 I 1 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=18068.000000 s hg38.chr17_GL383563v3_alt 108242 19 + 375691 ggaagttttgacacgtgct s panTro4.chr17 106132 19 + 82630442 ggaagttttgacacgtgct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495096 19 - 17838096 ggaagttttgacacgtgct i ponAbe2.chr17_random C 0 C 0 s macFas5.chr16 34639 16 + 80997621 ggaagttct---ccgcgca i macFas5.chr16 I 1 I 1 s papAnu2.chr16 46049 16 + 74645514 ggaaattct---cCGCGCA i papAnu2.chr16 I 1 I 2 s chlSab2.chr16 39193 16 + 75148670 ggaagttcc---acgcgct i chlSab2.chr16 I 1 I 2 s calJac3.chrUn_GL286409 852454 19 - 1291538 ggaagttctgacccgcact i calJac3.chrUn_GL286409 I 1 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e rheMac3.chr16 35080 18 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=83085.000000 s hg38.chr17_GL383563v3_alt 108261 61 + 375691 gcaatggggatgaagcctgaagacattctgcggagtgaaagaaggcagactcaaaag-gaca s panTro4.chr17 106151 61 + 82630442 gcaatggggatgaagcctgaagacattctgcggagtgaaagaaggcagactcaaaag-gaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495115 61 - 17838096 gcaatggggatgaaacctgaagacattctgcggagtaaaagaaggcagactcaaaag-gaca i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 35098 62 + 80904711 gcgatagggatggagcctgaaggctttgggctgagtgaaacgaggcagactcaggagtgaca i rheMac3.chr16 I 18 I 24 s macFas5.chr16 34656 62 + 80997621 gcgatagggatggagcctgaaggctttgggctgagtgaaacgaggcagactcaggagtgaca i macFas5.chr16 I 1 C 0 s papAnu2.chr16 46067 61 + 74645514 GCGACAGGGATGGAGCCTGAGGGCTTTGGGCTGAGTGAAAGGCGGCAGCCTCAGAAG-GAGA i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 39211 52 + 75148670 gcgacagggatggagcctgaagcctttctgcagcgtgaagggagagacactg---------- i chlSab2.chr16 I 2 C 0 s calJac3.chrUn_GL286409 852473 47 - 1291538 gcgacggggatgaagcctgaagacttcccgctgagtgaaagacacca--------------- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=10788.000000 s hg38.chr17_GL383563v3_alt 108322 16 + 375691 gatccc-ggggactgca s panTro4.chr17 106212 16 + 82630442 gatccc-ggggactgca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495176 16 - 17838096 gatCCC-GGGGACGGCA i ponAbe2.chr17_random C 0 C 0 s macFas5.chr16 34718 13 + 80997621 ----ctggggggctgca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 46128 17 + 74645514 GACACTGGGGGGCTGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 39263 10 + 75148670 -------gggggctgca i chlSab2.chr16 C 0 I 11 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e calJac3.chrUn_GL286409 852520 0 - 1291538 C e rheMac3.chr16 35160 24 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=4095.000000 s hg38.chr17_GL383563v3_alt 108338 23 + 375691 gactcaaaaggacagataccggg s panTro4.chr17 106228 23 + 82630442 gactcaaaaggacagataccggg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495192 23 - 17838096 GGCTCAAAAGGACAGATCCCGGG i ponAbe2.chr17_random C 0 I 450 s macFas5.chr16 34731 13 + 80997621 gttgtatgaggtc---------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 46145 13 + 74645514 GTTGTATGAGGTC---------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852520 15 - 1291538 --------aggacaggtgctggg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e chlSab2.chr16 39273 11 + 75148670 I e rheMac3.chr16 35160 24 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=29.000000 s hg38.chr17_GL383563v3_alt 108361 1 + 375691 a s panTro4.chr17 106251 1 + 82630442 a i panTro4.chr17 C 0 C 0 s calJac3.chrUn_GL286409 852535 1 - 1291538 g i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e chlSab2.chr16 39273 11 + 75148670 I e papAnu2.chr16 46158 0 + 74645514 C e rheMac3.chr16 35160 24 + 80904711 I e macFas5.chr16 34744 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3495215 450 - 17838096 I a score=4791.000000 s hg38.chr17_GL383563v3_alt 108362 9 + 375691 gactgcact s panTro4.chr17 106252 9 + 82630442 gactgcact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495665 9 - 17838096 gactgcact i ponAbe2.chr17_random I 450 C 0 s calJac3.chrUn_GL286409 852536 9 - 1291538 aactgcact i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e chlSab2.chr16 39273 11 + 75148670 I e papAnu2.chr16 46158 0 + 74645514 C e rheMac3.chr16 35160 24 + 80904711 I e macFas5.chr16 34744 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=166814.000000 s hg38.chr17_GL383563v3_alt 108371 101 + 375691 --------tacatgaggtccctagaatagtcaaatccatagagaaggaagccaaatggcagcctccccaggggccaggggaggaggaagggggagctgttgtttaatgg s panTro4.chr17 106261 101 + 82630442 --------tacatgaggtccctagaatagtcaaatccatagagaaggaagccaaatggcagcctccccaggggccaggggaggaggaagggggagctgttgtttaatgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495674 101 - 17838096 --------tacatgaggtccctagaatagtcagatccatagagaaggaagctaaatggcagcctccccagggtccaggggaggaggaagggggagctgttgtttaatga i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 35184 99 + 80904711 --------tctatgaggtccttggaagagtcaaatccacagagaagggagccaaatggcggcctccccaggggcc-ggggagga-ggagggggagctgctggtcagtgg i rheMac3.chr16 I 24 C 0 s macFas5.chr16 34744 97 + 80997621 ----------tatgaggtccttggaagagtcaaatccacagagaagggagccaaatggcggcctccccaggggcc-ggggagga-ggagggggagctgctggtcagtgg i macFas5.chr16 C 0 M 2323 s papAnu2.chr16 46158 94 + 74645514 ----------TATGAGGTCCTTAGAAGAGTCAAATC--CAGAGAAGGAAGCCAAATGGCGGCCTCCCCAGGGGcc-agggagga--gaaggggagctGCTGTTCAGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 39284 97 + 75148670 --------tatatgaggtccttagaagagtcaaatccacagagaaggcaggcaaatggcggcctccccaggggcc-ggggagga---agggggagctgtggttcagtgg i chlSab2.chr16 I 11 C 0 s calJac3.chrUn_GL286409 852545 98 - 1291538 tatgcagatcctagaataccccagaatagtcaaatccagagaaaaggaggcaaagcagtggcctccccagggctccatggaggaggaatggggaACTG----------- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=254561.000000 s hg38.chr17_GL383563v3_alt 108472 195 + 375691 gtccagttt-agttttgcaagctgaagagggctctggagatgggtttcacagcagtgtgaaggtagaaggtacttagcacaactgaactgtacgctaaaaatggttgagCGCTGAGGGAAGAAGT--AAAAAAAAG-TGGTTGAGGTGGGAAATGTATATCTGTGTATTTTACCACAATAA------------AAATA-----AAAAGTCTCCCAG s panTro4.chr17 106362 195 + 82630442 gtccagttt-agttttacaagctgaagagggctctcgagatgggtttcacagcagtgtgaaggtagaaggtacttagcacaactgaactgtacgctaaaaatggttgagCGCTGAGGGAAGAAGT--AAAAAAAAG-TGGTTGAGGTGGGAAATGTATATCTGTGTATTTTACCACAATAA------------AAATA-----AAAAGTCTCCCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495775 196 - 17838096 gtccagttt-agttttgcaagctgaagagggctctggagatgggtttcacagcagtgtgaaggtagaaggtacttagcacaacttaactgtatggtaaaaatggctgagcgccgaggggaggagt--aaaaaaaaactggttgagatgggaaatttatatctgtgtattttaccacaataa------------aaaaa-----aAAAGTCTCCCAG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 35283 209 + 80904711 gtacagtttcagttttgcaagctgaggagggctctggggatgggtttcacagccatgcgaaggcagaaggtgcccagcacaactgagctgtacgctaacaatggttgagCGCTGAGGGGAGGAGCAAAAAAAAAAA-CGGTTGAGGTGGGAAATTTAGATCCGTGTAATTTACCACAATAATAATAAAAACC-AAAAT-----AAGAGTCTCCCAG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 46252 208 + 74645514 GCACAGTTTCAGTTCTGCGAGCTGAAGGGGGCTCTGGGGGTGGGTTTCACAGCAGCGCGAAGGTAGAAGGTGCTCAGCACAACTGAGCTGTACGCTAACAATGGGTGAGCGCCGAGGGGAGGAGT-aaaaaaaaaa-CGGTTGAGGTGGGAAATTTAGATCCGTGTAATTTaccacaataataataaaaaac-aaaac-----aagagtctCCCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 39381 208 + 75148670 gtacagtttcagttttgcaagctgaagagggctctggggatgggtttcacagccctgcgaaggtagaaggtacttagcacaactgagctgcacgctaacaatggttgagCGCTGAGGGGAGGAGT--AAAAAAAAA-TGGCTGAGGTGGGAAATTTAGATCCATGTAATTTATCACAATAATAATAAAAAACAAAAAC-----AAGAGTCGCCCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852643 141 - 1291538 -----------------------------------------------------------AAGGTAGAAGGTTCTCAGCACAACTGAACTGTGCACCAAAAATGGCTGAGCGTGGAGGGGAGGAGT---CAAAAAAA-TGGTTGAGATAGGAAATTTATATTTGCATATTTTACCACAATAA------------AAAAACCACCAAGAGTCTCCTAG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75783711 949 + 122082543 I e canFam3.chr9 15613458 356 - 61074082 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=175761.000000 s hg38.chr17_GL383563v3_alt 108667 120 + 375691 AACTGGTAgtgccaggggccgcgtgttaactcatttaatgctcacaacaggcatgtagggcagggacaaccaaccc---tatttacagatgggcaaactgagactGACC--CTTATAA-GGGGGGA----- s panTro4.chr17 106557 120 + 82630442 AACTGGTAgtgccaggggccgcgtgttaactcatttaatgctcacaacaggcatgtagggcagggacaaccaaccc---tatttacagatgggcaaactcagactGACC--CTTATAA-GGGGGAA----- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3495971 121 - 17838096 AACCGGCAGTGCCAGTGGCcacgtgttaactcatttaatgctcacaacagccatgtagggcagggacaaccaaccc---tatttacagacgggcaaactgagactGACC--CTTATAAGGGGGGGA----- i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 35492 118 + 80904711 AACCGGCAGTGCC-GGGGCCGCgtgttaactca-acaatgctcacaacggccgggcagggcagggacaagcaaccc---tccttacagatgggcaaactgagacCGACC--CTTACAA-GGGGAGA----- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 46460 119 + 74645514 AACCGGCAGTGCCAGGGGCCGCGTGTTAACTCA-ACAATGCTCACAACGGCCAGGTAGGGCAGGGACAAGCAACCC---TCCTTACAGACGGGCAAACTGAGACCGACC--CTTACAA-GGGGTGA----- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 39589 118 + 75148670 AACCGGCCGTGCC-GGGGCcacgtgttaactca-acaacgctcacaatggccaggtagggcagggacaagcaaccc---tccttccagatgggcaaactgagacCGACC--CTTACAA-AGGGTGA----- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852784 120 - 1291538 AACTggcagcgccaggggctgcatgttaattcatgtaatgctctcaacagccatgcagggcagggaccatcaactactgtatttacagatggg-aaactgagacttaCC--CTTATCA-GGGGG------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15613814 124 - 61074082 AGCAGCTGGGACCTGTGACTGcacacttactcacttgatgctcacagccactgcataggcggggtgc---ttaccc---tatttttacagaagcaaactgaagctGCCCTGCTTACCC-AGAGGGTATGGC i canFam3.chr9 I 356 C 0 e mm10.chr11 75783711 949 + 122082543 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=81968.000000 s hg38.chr17_GL383563v3_alt 108787 82 + 375691 CAAGCAAGGGTGC--ACCCCAGGGTGTCCA---------GCCCCCACCCTGG---CCCTCCA---GAG------GCCAGCCCTGCTTCAG----CTCACCCACCCTGGG- s panTro4.chr17 106677 82 + 82630442 CAAGCAAGGGTGC--ACCCCAGGGTGTCCA---------GCCCCCACCCTGG---CCCTCCA---GAG------GCCAGCCCTGCTTCAG----CTCACCCACCCTGGG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3496092 82 - 17838096 CAAGCAAGGGTGC--ACCCTGGGGTGTCCA---------GCCCCCACCCTGG---CCCTCCA---GAG------GCCAGCCCTGCTTCAG----CTGGCCCACCCTGGG- i ponAbe2.chr17_random C 0 I 659 s rheMac3.chr16 35610 80 + 80904711 CAAGCAA-GGTGC--A-CCTGGAGGGTCCA---------GCCCCGCCCCCGG---CCCTCCG---GCG------GCCAGCCTCACTTCCG----CTCGCCCACCCTGGG- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 46579 72 + 74645514 CAAGCAA-GGTGC--A-CCTGGAGGGTCCA---------GCCCCGCCC-----------CCG---GAG------GCCAGCCTCACTTCAG----CTCGcccaccctggg- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 39707 80 + 75148670 CAAGCAA-GGTGC--A-CCTGGAGGATCCA---------GCCCCCACCCCAG---CCCTCCG---GAG------GCCAGCCTCACTTCAG----CTCGCCCACCCTGGG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852904 66 - 1291538 --------GCTG-----CCTG--------------------CCTCCCCCTGG---CCCTCCA---GAGGCCTATGCCAGCCCTGCTTCAG----CTCTGCCACCCTGGG- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75784660 93 + 122082543 CAAGTCAGAAGGC--AGCCTAGGAAGTCCATATACCATGGATTCCCATGAGG---CTCTGCGTGTGAA------CCCTGCCCCTCTTCAG----TTTAAACTCTGTGG-- i mm10.chr11 I 949 C 0 s canFam3.chr9 15613938 92 - 61074082 CGAGTTAGGGTCCCAAGTCCATGGCATATG---------GCCCCCCGTGCAGGGCCTCTCCA---CCT------GTCAGCCCTACTTCAGCCTCCTTAACCCCCTTTTGC i canFam3.chr9 C 0 C 0 e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=287466.000000 s hg38.chr17_GL383563v3_alt 108869 163 + 375691 CCCCTCCCCACACCCCAGCCCAGAGCCCCAGCTCTTCCCCAGCCTGCACCACCC-CTTCCCTACAGAACTGGATTTACACAGAGAAGGAA--------------CTGGG---------------------------CCTCCCAC-CCCCACTTCTGATA-CCTGAGGGATACAGCCCAAAGTGGACACACACTTACATGTGTGCACG s panTro4.chr17 106759 163 + 82630442 CCCCTCCCCACACCACAGCCCAGAGCCCCAGCTCTTCCCCAGCCTACACCACCC-CTTCCCTACAGAACTGGATTTACACAGAGAAGGAA--------------CTGGG---------------------------CCTCCCAC-CCCCACTTCTGATA-CCTGAGGGATACAGCCCAAAGTGGacacacacttacatgtgtgcacg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3496833 163 - 17838096 CCCCTCCCCACACCCCAGCCCAGAGCCCCAGCTCTTCCCCAGCCTGCACCACCC-CTTCCCTACAGAACTGGATTTACACAGAGAAGGAA--------------CTGGG---------------------------CCTCCCAC-CCCCACTTCTGATA-CCTGAGGGATACAGCCCAAAGTGGacacacacttacatgtgtgcacg i ponAbe2.chr17_random I 659 C 0 s rheMac3.chr16 35690 162 + 80904711 -CCCTCCCCACACCCCCGCCCAGAACCCCAGCTCTTCCCCAGCCTGCGCCACCC-CTTCCCTACAAAGCTGGATTTACACAGAGAAGGAA--------------CTGGG---------------------------CCTCCCAT-CCCCACTTCTGATA-CCTGAGGGATACAGCCCAAAGTGGACATACACTTACATGTGTGCACG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 46651 151 + 74645514 -ccctccccacacccccacccagaa-----------ccccaGCCTGTGCCACCG-CTTTCCTACAGAACTGGATTTACACAGAGAAGGAA--------------CTGGg---------------------------cctcccac-ccccacttctGATA-CCTGAGGGATACAGCCCAAAGTGGacatacacttacatgtgtgcacg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 39787 163 + 75148670 CCCCTCCCCACACCCCAGCCCAGAACCCCTGCTCTTCCCCAGCCTGGGCCACCC-CTTCCCCACAGAACTGGATTTACACAGAGAAGGAA--------------CTGGG---------------------------CCTCCCAT-CCCCACTTCTGATA-CCTGAGGGATACAGCCCAAAGTGGacacacacttacatgcacacacg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 852970 161 - 1291538 CCCCTCCCCATACCCCACCCCAGAACCCCAGCTCTTCCCTGGCCTGTATCACCCACTTCTCTACAGAACTGGATTTACAT--ACAAGGAA--------------CCCGG---------------------------CCTCCCAT-CCCCACCTCTGATA-CCTGAGGAACACAGGCC-AAGCGGacacacacttacacatgtgcacg i calJac3.chrUn_GL286409 C 0 I 348 s mm10.chr11 75784753 141 + 122082543 ---CTCCCC---------TCTGGGGCCTCAGTATTTCCCAGGCCTGT----CCT-CCTTTTTGTAGAC----ACTTACAGAGAAGAACAGGGTCACCATGGTTCATAGG---------------------------CCTCTGGT-CCTCACCTCC-------------ATGTACACCA----GTACCCAAGATGATCTGTGcacaca i mm10.chr11 C 0 I 2 s canFam3.chr9 15614030 169 - 61074082 TCCCTCCCCAAACCCCAATTCAGAGCCCCAGTTCCTCCTAGCAC-------CCC-CTCCCCTGCAAAACTGGATCTCAGCAGATAATGAC--------------CTGGAGGATGGGATCATTCTATGGCTTGGGGTCCTCTCATGCCCCACCTCCAGTGTTTTGAGCGACACATCCCAAAGGACACACACA---------------- i canFam3.chr9 C 0 C 0 e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=15894.000000 s hg38.chr17_GL383563v3_alt 109032 8 + 375691 CACGGTAC s panTro4.chr17 106922 8 + 82630442 cacggtac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3496996 8 - 17838096 cacagtac i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 35852 8 + 80904711 CACAGTac i rheMac3.chr16 C 0 I 728 s papAnu2.chr16 46802 8 + 74645514 cacagtac i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 39950 8 + 75148670 cacagtac i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 853479 8 - 1291538 cacagtac i calJac3.chrUn_GL286409 I 348 I 1 s mm10.chr11 75784896 5 + 122082543 cacgg--- i mm10.chr11 I 2 I 1 s canFam3.chr9 15614199 5 - 61074082 ---GGTAC i canFam3.chr9 C 0 C 0 e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=21439.000000 s hg38.chr17_GL383563v3_alt 109040 17 + 375691 -CACACATGTACACACAG s panTro4.chr17 106930 17 + 82630442 -cacacatgtacacacag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497004 17 - 17838096 -cacacatgtacacacag i ponAbe2.chr17_random C 0 C 0 s papAnu2.chr16 46811 15 + 74645514 -cacacatgcacacag-- i papAnu2.chr16 I 1 I 492 s chlSab2.chr16 39959 15 + 75148670 -cacacatgcacacac-- i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 853488 17 - 1291538 -cacacatgcacacacac i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75784902 15 + 122082543 -tacacatacacacac-- i mm10.chr11 I 1 C 0 s canFam3.chr9 15614204 16 - 61074082 CCACAGAGACTCACAG-- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 35860 728 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=1471.000000 s hg38.chr17_GL383563v3_alt 109057 28 + 375691 AGACACACATACAGCCATG-------------------------------------TAT---GTGCAT s panTro4.chr17 106947 28 + 82630442 agacacacatacagccatg-------------------------------------tat---gtgcat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497021 28 - 17838096 agacacacatacagctatg-------------------------------------tat---gtgcac i ponAbe2.chr17_random C 0 C 0 s papAnu2.chr16 47318 28 + 74645514 agacacacacacacacaca-------------------------------------gac---acacac i papAnu2.chr16 I 492 C 0 s calJac3.chrUn_GL286409 853505 65 - 1291538 agacccacaTAAGGGTAAACCCGCCTTGCTTGGCTCTCATTCTCACATTGCTTGACTAT---GTGTGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75784917 16 + 122082543 --acacacacacacacac-------------------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15614220 31 - 61074082 ATGCACACATGCACCCCCC-------------------------------------TCCCCAGTACAG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 39974 0 + 75148670 C e rheMac3.chr16 35860 728 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=1199276.000000 s hg38.chr17_GL383563v3_alt 109085 672 + 375691 ACACACAAACGCACCTGGAGCTGGGA------AGGGAAGGC--------------CCTGGTGTCTGGC--ATGGAGAGAGGAAGGGGTGGGCTTTGGCCAGAGTGGCCTGGCAGCCGGCACC---TCTCCAGTCCCCAGGCCTGGACCACCTCTACAAAGTTGGACAGAGGGAAAGGAGGAAGGGTCTAGCTTG------------GTCTCTACCTTGGCACAGCTGGGGTTTGACAAATGCTCAGTTCTGCTCCTAGGGGTGGG-CTGGAG--C-CCCCGCCAGGCAGGGCTGGACATGCCCTGAGTCATAGCATGGGTGGTTCTA---GAGAGGGCAGGGGTG--GGATGGAGCGTGCAGGCCTCTCAGTGCCCTACCAGGGCCCTGAGGCTTGCGTGGATGGCACTCACACCTACCCACGGCAGTCCACAT----GTGGCCCAGGCTGGGCTGGGGGACAGCCTGGGGTGGCACGCAGTAGCCTGTCCTGCTGGGTGAGCATGCTGCCAAGGGCAG-CCCTTGCTGCCAGGCTGGG-----AG----GAGGGGC-AGGGGG--CCTGCAGGTTGGGAG-GCTGGGTGGGGCCTGGGCCCAGGCAGCTCTGTGGGAAGCCGCTGGATCTGAGCTGGGCT--GGCTCAGGCCCTTACATGGCACTACTAGGGAGACTCTACTGGCCATGCAG--GCCCTTACCTTGCGAGAGAACATCAATTTTGGCACCTTCCTCCCA s panTro4.chr17 106975 620 + 82630442 acacacaaacgcacCTGGAGCTGGGA------AGGGAAGGC--------------CCTGGTGTCTGGC--ATGGAGAGAGGAAGGGGTGGGCTTTGGCCAGAGTGGCCTGGCAGCCGGCACC---TCTCCAGTCCCCAGGCCTGGACCACCTCTACAAAGTTGGACAGAGGGAAAGGAGGAAGGGTCTAGCTTG------------GTCTCTACCTTGGCACAGCTGGGGTTTGACAAATGTTCAGTTCTGCTCCTAGGGGTGTT-CTAGAG----------------------------------------------------------GAGAGGGCAGGGGTG--GGATGGAGCATGCAGGCCTCTCAGTGCCCTACCAGGGCCCTGAGGCTGGCGTGGATGGCACTCACACCTACCCATGGCAGTCCACAT----GTGGCCCAGGCTGGGCTGGGGGACAGCCTGGGGTGGCACGCAGTAGCCTGTCCTGCTGGGTGGGCATGGTGCCAAGGGCAG-CCCTCGCTGCCAGGCTGGG-----AG----GAGGGGC-AGGGGG--CCTGCAGGTTGGGAG-GCTGGGTGGGGCCTGGGCCCAGGCAGCTCTGTGGGAAGCCGCTGGATCTGAGCTGGGCT--GGCTCAGGCCCTTCCATGGCACTACTAGGGAGACTCTACTGGCCATGCAG--GCCCTTACCTTGCGAGAGAACATCAATTTTGGCACCTTCCTCCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497049 627 - 17838096 acacac--acgcacCTGGAGCTGGGA------AGGGAAGGC--------------CCTGGTGTCTGGC--ATGGAGAGAGGAAGGGGTGGGCTTTGGCCAGACTGGCCTGGCAGCCAGCACC---TCTCCAGTCCCCAGGCCTGGACCACCGCTACAAAGTTGGACAGAGGGAAAGGGGGAAGGGTCTAGCTTG------------GTCTGTACCGTGGCACAGCTGGGGTTTGACAAATGCTCAGTTCTGCTCCTAGGGGCGGG-CTGGAC-------------------------ATGCCCTGAGTCATAGCATGGGTGGTTCTAGAGGGGAAGGCAGGGGTG--GGATGGAGCGTGCAGGCCTCTCAGTGCCCAACCAGGGCCCTGAGGCTGGCGTGGGTGGCACTCACACCCACCCATGGCAGTCCACATGT-GGTGGCCCAGTCTGGGCTGGGGGGCAGCCTGGGGTGGCATGCAGTAGCCTGTCCTGCTGGGTGGGCACGGTGCCAAGGGCAG-ACCTCGCTGCCAGGCTGGG-----AG----GAGG-------------------------------GGGTGGGGCCTGGGCCCAGGCAGCTCTGCGGGAAGCCGCTGGATCTGAGCTGGGCT--GGCTCAGGCCCTTCGATGGCGCTACTAGGGGGACTCCACTGGCCATGCAG--GCCCTTACCTTGCGAGAGAACATCAATTTTGGNNNNNNNNNNCCA i ponAbe2.chr17_random C 0 I 52 s rheMac3.chr16 36588 661 + 80904711 acacacacacgcacCTGGAACAAGGA------AGGAAAGGC--------------CCTGGTGTCCGGCAGAGAGAGAGAGGAAGGCGTGGGCTTTGGCCAGAGCGGCCTGGCAGCCAGCACC---TCTCCAGCCCCCAGGCCGGGACCACCTCTACAAAGCTGGACAGAGGGAAAGCAGGGAGGGTCTAGCTTG------------GTCTCTACCTTGGCACAGCTGGGGTTTGATAAATGCTCAGTTCTGCTCCTAGGGGCG-G-CTGGAG--C-CCCTGCCAGGCAAGGCTGGGCATGACCTGAGCCACAGCACAGGTGGTTCTAGAGGGGAGGGCAGGAGTG--GGATGGAGCATGCAGGCCTCTCAGTGCCCAACCAGGGCCCTGGGCCTGGCGTGGATGGCACTCACACCTACCCATGGCAGTCCACGTGT-CGTGGCCCAGGCTGGGCTGGGGAACAG-CTGGGGTGGCACACAGTAGCCTGTCCTACTGGGTGGGCACGGCGCCAAGGGCAG-CCCTCAC-GCCAGGCTGGG-----AG----GAGGGGC-AGGGAG--CCTGCAGGTTGGGAG-TCTGGGTGGG---------------GCTCTGCGGG-AGCCGCTGGATCTGAGCTGGGCT--GGCTCAGGCCCTTCCATGGCACTACTAGGGGGACTCCACTGGCCACGCAG--GCCCTTACCTTGCGAGAGAACATCAATTTTGGCACCTTCCTCCCA i rheMac3.chr16 I 728 C 0 s papAnu2.chr16 47346 650 + 74645514 acacacacacgcacctgGAACAAGGA------AGGAAAGGC--------------CCTGGTGTCtggt--ggagagagaggaaggcgTGGGCTTTGGCCAGAGCGGCCTGGCAGCCAGCACC---TCTCCAGTCCCCAGGCCGGGACCACCTCTACAAAGCTGGACAGAGGGAAAGTAGGGAGGGTCTAGCTTG------------GTCTCTACCTTGGCACAGCTGGGGTTTGATAAATGCTCAGTTCTGCTCTTAGGGGCG-G-CTGGAG--C-CCCTGCCAGGCAAGGCTGGGCATGCCCTGAGCCACAGCACAGGTGGTTctagaggggagggcaggggtg--ggatGGAGCGTGCAGGCCTCTCAGTGCCCaaccagggccctgggcctggcgtGGATGGCACTCACACCTACCCATGGCAGTCCACGTGT-CGTGGCCCAGGCTGTGC-----------CTGGGGTGGCACGCAGTAGCCTGTCCTACTGGGTGGGCACGGCGCCAAGGGCAG-CCCTCACggccaggctggg-----ag----gaggggc-agggag--ccTGCAGGTTGGGAG-TCTGGGTGGG---------------GCTCTGCGGG-AGCCGCTGGATCTGAGCTGGGCT--GGCTCAGGCCCTTCCATGGCACTACTTGGGGGACTCCACTGGCCACGCAG--GCCCTTACCTTGCGAGAGAACATCAATTTTGGCACCTTCCTCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 39974 660 + 75148670 acacacacacgcacCTGGAACAAGGA------AGGAAAGGC--------------CCTGGTGTCTGGCAAAGAGAGAGAGGAAGGCGTGGGCTTTGGCCAGAGCAGCCTGGCAGCCAGCACC---TCTCCAGTCCCCAGGCCGGGACCACCTCTGCAAAGCTGGACAGAGGGAAAGCAGGGAGGGTCTAGCTTG------------GTCTCTATCTTGGCACAGCCGGGGTTTGATAAATGCTCAGTTCTGCTCCTAGAGGCG-G-CTGGAG--C-CCCTGCCAGGCAAGGCTGGGCATGACCTGAGCCACAGCACAGGTGGTTCCAGA-GGGAGGGCAGGGGTG--GGATGGAGCGTGCAGGCCTCTCAGTGCCCAACCAGGGCCCTGGGCCTGGCGTGGACGGCACTCACACCTACCCATGGCAGTCCACGTGT-CGTGGCCCAAGCTGGGCTGGGGAACAGCCTGGGGTGGCACACAGTAGCCTGTCATACTGGGTGGGCACGGCGCCAAGGGCAG-CCCTCAC-GCCAGGCTGGG-----AG----GAGGGGC-AGGGAG---CTGCAGGTTGGGAG-TCTGGGTGGG---------------GCCCTGCGGG-AGCCGCTGGATCTGAGCTGGGCT--GGCTCAGGCCCTTCCACGGCACTACTAGGGGGACTCCACTGGCCACGCAG--GCCCTTACCTTGCGAGAGAACATCAATTTTGGCACCTTCCTCCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 853570 680 - 1291538 GCACACACACGCACCTGGAGCTGGGA------AGGGAAGGC--------------CCTGGTGTCTGGC--ATCGGGAGAAGAAGTGGTGGGCTTTGGCCAGAGTGGCCTGGCAGCCAGCACC---CCTCCAGTCCCCAGGCCTGGACCACCTCTACAAAGCCGGGCAGAGGGAAAGGAGAG-GGGTCTAGCCTG------------GCCTCTACCTTGGCACAGCTGGAGTTTGCCAAATGCTCCGCCCTGCCCCTAGGGGTGGG-CTGGAGCAC-CCCTGAAAGGCAAGGCTGGGCTTGCCCTGAGACACAGCCTGGGTGGTTCTAGAGGGGAGGGCAGGGGTG--AGATGGATTGTGTAGGCCTCTCAGTGCCCAATCAGAGCCCTGGGCCTAGGGTGGATTGCGCCCGCACCTGCCTGTGGCGGTCCATGTGT-CGTGGCCAAGGCTGGGCTGGGGGATGGCCTGTGGTGACACCCAGTAGCCTGTCCCACTGGGTGGGCACAGTGCCAAGGGCAG-CCCTTGCTGGCAGGCTGGG-----AG----GAAAAGCAAGGGGG--GCTACAGGTTGGGAG-GCTGGGTGGGGCCTAAGCCCAGGCAGCTCTGTGGGAAGCCGCTGGATCTGAGCTGGGCT--GGCTCAGGCCCTTGCGTGGCACTACTAGGGGGACTCCACTGGCCACACAG--GCCCTTACCTTGCGAGAGAACATCAATTTTGGCACCTTCCTCCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75784933 620 + 122082543 acacacacacacacCGGGAACAGGGAGAAGGCAGCAGGAAC--------------CCCAGGCTCTGAG--ATGGGGCAAGGGAA--ACTGGCCTCTACCAGAGTGATCTGACAGCTG--------------GTCCCCAAGCC-AGACAAGCTCTGCTAAGCCAG---GAGGAAGGGTAGGATGGGCTCTGCCTGGCCCTGCAGTCTGCCTCTCCCTTG--CCAGGTTGGGGTTACCAGGTGCTCAGCTCT---------GATGGG-CTATCA--CACCCTAAAAAGGAA-----------------------------------TCAGAGGAGTGAGCAGGGATGCAGGATGGAGTGGCAGGGCCTTCAAGTACCCAGCCTGGGCCCTGAGCCCAATGTAGATGGTTCTCATAATTGCCCATGGCAGTTCACATGA--GTGACCCAGGCTGGGTAGAGATATGGCATGGGGTGTCCCTC-------------------TAGGCACAGAGCCAAGGGCAGCCCCTCAGTGGCAAGGTGGGTCAGAAA----GAAGGGC-AGGAAGATACAACAGGTTGGGGGTGCTAAGTGAGGCCTAGG-CCAGGCAGCACT-TGGA-AGCTATTCCATGTGTGCTGGGCT--GGCCCAGGCCTTTCCACAGTCCTACAAGGCT--CTCTAATGGCCACACGG--GCCCTTACCTTTCTGGAAAACATCAGCTTTGGCACCTTTCTCCCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15614251 625 - 61074082 CCCCACAATCCTTCTAGAGCCTGGGT------AGGGAAGGCAGGGCACAGAGGGGCCTGGTGTCTGGG--CTGGGAAGGGGAATGGAT-GGCTCTGGCCAGAGTGGCCTGCCAGCAGGTGCCCATTCCCCAGTTCCCAAGCCTGGACAACTGCTACAAAGCTGGGTGAAGAGAGAGGGAGAGGGATATGCCAGGGCCCTGCAGCCTGCCCTCCCCTTGGCACAGCTGGGAGTCACCA--TTCTCGACTCCTTTCCTAGGGGCAGGTCTGGAA----CCCTGGCA-GCAAGCCCGGGCA----------------------GCTCCCCAAGGAGAGGGC-----TG--------------------------TGCCCCATCACGACACTGGGCCCAAAGTGGA---CACT--------GCCGTGGCAGCCCAGGCGTgcggggcccaggcggggggggcgggggg---AGGGAGGCGCCAGGCAGCCTGACCCTCTGAGTGG---------CAGAGGCAT-------------GGCTGGG-----GGCGCTGTGGGCA-GGGAAG--CTCACAGGGTGGGT--TGAGGGCAGGGTCTGGGCCCAGGCAGCTCTGATTTTAGTCCCTTGCCCTGAGACCAGCCCAGGCCCAGACCCCTCCACGGCTCTACGGGGAGTCCTACCTTGGCTACACTACTACCCTTACCTTGGGAGAGAACATCAACTTTGGCACCTTCCACCCA i canFam3.chr9 C 0 C 0 e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=107370.000000 s hg38.chr17_GL383563v3_alt 109757 76 + 375691 CAGGGAGCAATGGGGTGA-----GGGG--AAGGGAACAGGACAGTTGAGAACATGGAGCTGACACATG----CTTGAGTGGCAGAGC s panTro4.chr17 107595 76 + 82630442 CAGGGAGCAATGGGGTGA-----GGGG--AAGGGAACAGGACAGTTGAGAACATGGAGCTGACACATG----CTTGAGCGGCAGAGC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 37249 82 + 80904711 CAGGGAGCAATGGGGTGA-----GGGGGCAAGGGAACAGGACAGTTGAGAACATGGAACTGGCACATGCTGACTCGAATGGCAGAGC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 47996 82 + 74645514 CAGGGAGCAACGGGGTGA-----GGGGGCAAGGGAACAGGACAGTTGAGAACATGGAACTGGCACATGCTGACTCGAGTGGCAGAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 40634 82 + 75148670 CAGGGAGCAACGGGGTGA-----GGGGGCAAGGGAACAGGACAGTTGAGAACATGGAACCAACACATGCTGACTCGAGTGGCAGAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854250 82 - 1291538 CAGGGAGCAATGGGATGA-----GGGGGCAAGGGAACAGGACAGTTGAGAACATGGAGTGGACATATTCTGGCTCAAGAGGCAGAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785553 66 + 122082543 GAGGGAGCAGTGTG---------------AAGGGAACGGTGTGGATGAGACCATGGAACAGACGCAGG----TTCAA--TGCAGAGC i mm10.chr11 C 0 I 2 s canFam3.chr9 15614876 73 - 61074082 GAGGGATCGATGGATCGATGCACAGGGCAAAGGGAACAGCACGGCTAAGAAGA--AAGCTGATGCCTG------------GCAGCCC i canFam3.chr9 C 0 C 0 e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3497676 52 - 17838096 I a score=5558.000000 s hg38.chr17_GL383563v3_alt 109833 8 + 375691 -CAGAGGGC s panTro4.chr17 107671 8 + 82630442 -CAGAGGGC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 37331 8 + 80904711 -CAGAGGGG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 48078 8 + 74645514 -CAGAGGGG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854332 8 - 1291538 -CAGAGGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785621 6 + 122082543 -CAGAGG-- i mm10.chr11 I 2 C 0 s canFam3.chr9 15614949 8 - 61074082 AAAGCGGG- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 40716 0 + 75148670 C e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3497676 52 - 17838096 I a score=7482.000000 s hg38.chr17_GL383563v3_alt 109841 10 + 375691 ---AGCACCAGGG s panTro4.chr17 107679 10 + 82630442 ---AGCACCAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497728 10 - 17838096 ---agcaccaggg i ponAbe2.chr17_random I 52 C 0 s rheMac3.chr16 37339 10 + 80904711 ---AGTGGCAGAG i rheMac3.chr16 C 0 I 1 s papAnu2.chr16 48086 10 + 74645514 ---AGTGGCAGAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854340 10 - 1291538 ---AGCACCAGGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785627 9 + 122082543 ----GACACAGGG i mm10.chr11 C 0 I 1 s canFam3.chr9 15614957 13 - 61074082 ACATGCTCCTGGT i canFam3.chr9 C 0 C 0 e chlSab2.chr16 40716 0 + 75148670 C e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=4270.000000 s hg38.chr17_GL383563v3_alt 109851 12 + 375691 ACCAGGCCAGGC s panTro4.chr17 107689 12 + 82630442 GCCGGACCAGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497738 10 - 17838096 -ccgggccagg- i ponAbe2.chr17_random C 0 C 0 s calJac3.chrUn_GL286409 854350 12 - 1291538 GCTGGGCCAGGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785637 12 + 122082543 ATAGGGTCTGAC i mm10.chr11 I 1 I 11 s canFam3.chr9 15614970 12 - 61074082 TCCAACCCAGGG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48096 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=3504.000000 s hg38.chr17_GL383563v3_alt 109863 10 + 375691 TGCAGAGGGG- s panTro4.chr17 107701 10 + 82630442 TGCAGAGGGG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497748 9 - 17838096 tgcaga-ggg- i ponAbe2.chr17_random C 0 C 0 s papAnu2.chr16 48096 9 + 74645514 -CCCGAGGGG- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854362 10 - 1291538 AGCAGAGGGG- i calJac3.chrUn_GL286409 C 0 T 40 s canFam3.chr9 15614982 10 - 61074082 -GCCAAAGAGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e chlSab2.chr16 40716 0 + 75148670 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=6182.000000 s hg38.chr17_GL383563v3_alt 109873 9 + 375691 AGCACCAGG s panTro4.chr17 107711 9 + 82630442 AGCACCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497757 9 - 17838096 agcaccagg i ponAbe2.chr17_random C 0 C 0 s papAnu2.chr16 48105 9 + 74645514 AGCACCAGG i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15614992 9 - 61074082 AATGCTGGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=6632.000000 s hg38.chr17_GL383563v3_alt 109882 29 + 375691 GGCCGGGCCAGGCTGCAGAGG-GGAGCACC s panTro4.chr17 107720 29 + 82630442 GACCGGGCCAGGCTGCAGAGG-GGAGCACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3497766 27 - 17838096 ggcc-ggccagg-tgcagagg-ggagcacc i ponAbe2.chr17_random C 0 C 0 s canFam3.chr9 15615001 26 - 61074082 ----GTCCCGAGCCCCAGAGATGGAGCTCC i canFam3.chr9 C 0 I 9 e mm10.chr11 75785649 11 + 122082543 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=57383.000000 s hg38.chr17_GL383563v3_alt 109911 220 + 375691 AGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAG s panTro4.chr17 107749 220 + 82630442 AGGGACCGGGCCAGGCTGCAGAGGGGAGCACCAGgggccaagccaggctgcagagggcagcaccaggggccgggccaggctgcagagggcagcaccaggggccgggccaggctgcagagggcagcaccagggatcgggccaggctgcagaggggagcaccaggggccgggccaggttgcagagggcagcaccagcggccgggccaggctgCAGAGGGCAG i panTro4.chr17 C 0 I 32 s ponAbe2.chr17_random 3497793 217 - 17838096 aggg-ccgggccaggctgcaga-gggagcacca-gggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggggag i ponAbe2.chr17_random C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=16975.000000 s hg38.chr17_GL383563v3_alt 110131 61 + 375691 CACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGG s panTro4.chr17 108001 61 + 82630442 CACCAGggaccaggccaggctgcagagggcagcaccaggggccgggccaggctgcagaggg i panTro4.chr17 I 32 T 256 s ponAbe2.chr17_random 3498010 61 - 17838096 caccaggggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggg i ponAbe2.chr17_random C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=0.000000 s hg38.chr17_GL383563v3_alt 110192 2 + 375691 GA e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498071 0 - 17838096 C e panTro4.chr17 108062 256 + 82630442 T a score=18004.000000 s hg38.chr17_GL383563v3_alt 110194 70 + 375691 GAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGATCAGGCCAGGCTGCAGAGGGGAGCAA s panTro4.chr17 107806 70 + 82630442 cagcaccaggggccgggccaggctgcagagggcagcaccaggggccgggccaggctgcagagggcagcac i panTro4.chr17 T 256 T 32 s ponAbe2.chr17_random 3498071 70 - 17838096 gagcaccaggggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggggagcac i ponAbe2.chr17_random C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=33433.000000 s hg38.chr17_GL383563v3_alt 110264 125 + 375691 CAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGATCGGGCCAGGCTGCAGAGGGGAGCAACAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAG s panTro4.chr17 107844 125 + 82630442 caggggccgggccaggctgcagagggcagcaccagggatcgggccaggctgcagaggggagcaccaggggccgggccaggttgcagagggcagcaccagcggccgggccaggctgCAGAGGGCAG i panTro4.chr17 T 32 C 0 s ponAbe2.chr17_random 3498141 125 - 17838096 caggggccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagaggggagcACCAGGGGCCGGGCCAGGATGCAGAGGGGAGCACCAGgggccgggccaggctgcagaggggag i ponAbe2.chr17_random C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=5581.000000 s hg38.chr17_GL383563v3_alt 110389 61 + 375691 CACCAGGGACCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGG s panTro4.chr17 107969 61 + 82630442 CACCAGGGACCAGGCCAGGCTGCAGAGGGGAGCACCAGggaccaggccaggctgcagaggg i panTro4.chr17 C 0 I 32 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C a score=0.000000 s hg38.chr17_GL383563v3_alt 110450 2 + 375691 GA e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C e panTro4.chr17 108030 32 + 82630442 I a score=3785.000000 s hg38.chr17_GL383563v3_alt 110452 41 + 375691 GAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAG s panTro4.chr17 108062 41 + 82630442 cagcaccaggggccgggccaggctgcagagggcagcaccag i panTro4.chr17 I 32 T 265 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C a score=0.000000 s hg38.chr17_GL383563v3_alt 110493 25 + 375691 GGGCCGGGCCAGGCTGCAGAGGGGA e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C e panTro4.chr17 108103 265 + 82630442 T a score=6466.000000 s hg38.chr17_GL383563v3_alt 110518 80 + 375691 GAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGACCGGGCCAGGCTGCAGAGGGGAGAGCACCAGGGACC s panTro4.chr17 107838 78 + 82630442 cagcaccaggggccgggccaggctgcagagggcagcaccagggatcgggccaggctgcagaggg--gagcaccaggggcc i panTro4.chr17 T 265 I 187 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C a score=7322.000000 s hg38.chr17_GL383563v3_alt 110598 85 + 375691 GGGCCAGGCTGCAGAGGGGAGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGCAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGG s panTro4.chr17 108103 83 + 82630442 gggccaggctgcagaggg--cagcaccagaggccgggccaggctgcagagggcagcaccaggggccgggccaggctgCAGAGGGG i panTro4.chr17 I 187 T 347 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C a score=2775.000000 s hg38.chr17_GL383563v3_alt 110683 31 + 375691 AGCACCAGGGACCAGGCCAGGCTGCAGAGGG s panTro4.chr17 107839 31 + 82630442 agcaccaggggccgggccaggctgcagaggg i panTro4.chr17 T 347 I 99 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C a score=0.000000 s hg38.chr17_GL383563v3_alt 110714 5 + 375691 GAGAG e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C e panTro4.chr17 107870 99 + 82630442 I a score=5863.000000 s hg38.chr17_GL383563v3_alt 110719 64 + 375691 CACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGACCAGGCCAGGCTGCAGAGGGCAA s panTro4.chr17 107969 64 + 82630442 CACCAGGGACCAGGCCAGGCTGCAGAGGGGAGCACCAGggaccaggccaggctgcagagggcag i panTro4.chr17 I 99 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17_random 3498266 0 - 17838096 C a score=30218.000000 s hg38.chr17_GL383563v3_alt 110783 118 + 375691 CACCAGGGACCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTGCAGAGGGGAGCACCAGGGGCCGGGCCAGGCTG s panTro4.chr17 108033 113 + 82630442 caccaggggccgggccaggctgcagagggcagcaccaggggccgggccaggctgcagagggcagcaccaggggcc-----aggctgcagagggcagcaccagaggccgggccaggctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3498266 118 - 17838096 caccagggaccgggccaggctgcagaggggagcaccaggggccgggccaggctgcagagggcagcaccagggaccgggccaggctgcagagggcagcaccagggaccgggccaggctg i ponAbe2.chr17_random C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 40 - 1291538 T e chlSab2.chr16 40716 0 + 75148670 C e papAnu2.chr16 48114 0 + 74645514 C e rheMac3.chr16 37349 1 + 80904711 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=21529.000000 s hg38.chr17_GL383563v3_alt 110901 17 + 375691 CAGAGGGGAGCACCAGC s panTro4.chr17 108146 17 + 82630442 cagagggcagcaccagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3498384 17 - 17838096 cagagggcagcaccagg i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37350 17 + 80904711 CAGAGGGGAGCACCAGG i rheMac3.chr16 I 1 C 0 s chlSab2.chr16 40716 17 + 75148670 CAGAGGGGAGCACCAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854332 17 - 1291538 CAGAGGGAAGCACCAGG i calJac3.chrUn_GL286409 T 40 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e papAnu2.chr16 48114 0 + 74645514 C e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=40542.000000 s hg38.chr17_GL383563v3_alt 110918 21 + 375691 GGCCGGGCCAGGCTGCAGAGG s panTro4.chr17 108163 21 + 82630442 ggccgggccaggctgCAGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3498401 21 - 17838096 ggccgggccaggctgCAGAGG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37367 21 + 80904711 GGCCGGGCCAGGCTGCAGAGG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 48114 21 + 74645514 GGCCGGGCCAGGCTGCAGAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 40733 21 + 75148670 GGCCGGGCCGGGCTGCAGAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854349 21 - 1291538 GGCTGGGCCAGGCAGCAGAGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75785649 11 + 122082543 I e canFam3.chr9 15615027 9 - 61074082 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=5600.000000 s hg38.chr17_GL383563v3_alt 110939 2 + 375691 GG s panTro4.chr17 108184 2 + 82630442 GG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3498422 2 - 17838096 GG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37388 2 + 80904711 GG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 48135 2 + 74645514 GG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 40754 2 + 75148670 GG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854370 2 - 1291538 GG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785660 2 + 122082543 GG i mm10.chr11 I 11 C 0 e canFam3.chr9 15615027 9 - 61074082 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=1911.000000 s hg38.chr17_GL383563v3_alt 110941 1 + 375691 T s panTro4.chr17 108186 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3498424 1 - 17838096 T i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37390 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 48137 1 + 74645514 T i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 40756 1 + 75148670 T i chlSab2.chr16 C 0 C 0 s mm10.chr11 75785662 1 + 122082543 T i mm10.chr11 C 0 C 0 e canFam3.chr9 15615027 9 - 61074082 I e calJac3.chrUn_GL286409 854372 0 - 1291538 C e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=83109.000000 s hg38.chr17_GL383563v3_alt 110942 44 + 375691 CCACAGGCACCCACAACCCCAGCCCACGTAGTGAGGCTCAGAGG s panTro4.chr17 108187 44 + 82630442 CCACAGGCACCCACAACCCCAGCCCACGTAGTGAGGCTCAGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3498425 44 - 17838096 CCACAGGCACCCACAACCCCAGCCCACGTAGTGAGGCTCAGAGG i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37391 44 + 80904711 CCATACACACCTACAACCCCAGCCCACGTAGTGAGGCTCAGAGG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 48138 44 + 74645514 CCATACACATCTACAACCCCAGCCCATGTAGTGAGGCTCAGAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 40757 44 + 75148670 CCATACACATCTACAACCCCAGCCCATGTAGTGAGGCTCAGAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854372 44 - 1291538 CCACAGACACCCCTGACCCCACCCCACGCAGTGAGGTTCAGAGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785663 39 + 122082543 CTATAGATGTCCACAACCC---TCCAC--AGAAAGGCTTAGAGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15615027 9 - 61074082 I e macFas5.chr16 34841 2323 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=192808.000000 s hg38.chr17_GL383563v3_alt 110986 86 + 375691 GCCTCT-GGGCTCAGGCCG--TGG---ACACCCTGCCTGGAGTGGCATCGGCCTCCTACAGTGGCTC----GGCTTCCAGGGTGCAAAGTGGCGTC s panTro4.chr17 108231 86 + 82630442 GCCTCT-GGGCTCAGGCCC--CGG---ACACCCTGCCTGGAGTGGCATCGGCCTCCTACAGTGGCTC----GGCTTCCAGGGTGCAAAGTGGCGTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3498469 86 - 17838096 GCCTCT-GGGCTCAGGCCC--TGG---ACGCCCTGCCTGGAGTGGAATAGGCCTCCTCCAATGGCTC----AGCTTTCAGGGTGCAAAGTGGCGTC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37435 86 + 80904711 GCCTCT-GGGCTCAGGCCC--TGG---ACGCCCTACCTCGAATGGTGTCAGCCTCCTCCAGTGGCTC----GGCTTCCAGGGTGCACAGTGGCATC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 37164 86 + 80997621 GCCTCT-GGGCTCAGGCCC--TGG---ACGCCCTGCCTCGAATGGTGTCAGCCTCCTCCAGTGGCTC----GGCTTCCAGGGTGCACAGTGGCGTC i macFas5.chr16 M 2323 C 0 s papAnu2.chr16 48182 86 + 74645514 GCCTCT-GGGATCAGGCCC--TGG---AGGCCCTGCCTCGAATGGTGTCAGCCTCCTCCAGTGGCTC----GGCTTCCAGGGTGCACAGTGGCGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 40801 86 + 75148670 GCCTCT-GGGCTCAGGCCC--TGG---ACGCCCTGCCTCGAATGGTGCCAGCCTTCTCCAGTGGCTC----GGCTTCCAGGGTGCACAGTGGCGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854416 86 - 1291538 GCATCT-GAGCTCAGGCCC--TGG---ATGGCCTGCCGGCAGTGTCGTCAGCTTCCTCCTGTGACTC----AGCTTCCAGGGTGCATGGTGGCGTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785702 87 + 122082543 ACCTCTGGGGTTCAGACCCAATGGCTACCACCCTGCCTAGA-----GCCTAGCTTCTTCAGTAGTACCTGTGACTTCCA----GCATAGAAACTTC i mm10.chr11 C 0 C 0 e canFam3.chr9 15615027 9 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=393672.000000 s hg38.chr17_GL383563v3_alt 111072 178 + 375691 CCCACTC-CTC-AGGGCG------TCT---------------GGGAGGCCTGGAGGCACCAGTACCCAACCCGC----CCTCCCTTGG--CCTGCAGGACAGAC-ATCA-CCCTGCCCCTCTCTTTCCCTCTCAGCAGCCCCTCCCCA------GGCTCGA--GGGTCCTCGGTCCAGGCCTTCATCTTCCCATTCTCATCTG-----TTTCTT----TGCTCCCC s panTro4.chr17 108317 180 + 82630442 CCCACTC-CTC-AGGGCG------TCT---------------GGGAGGCCTGGAGGCACCAGCACCCAACCCGC----CCTCCCTTGG--CCTGCAGGACAGAC-ATCA-CCCTGCCCCTCTCTTTCCCTCTCAGCAGCCCCTCCCCA------GGCTCGAGGGGGTCCTCCGTCCAGGCCTTCATCTTTCCATTCTCATCTG-----TTTCTT----TGCTCCCC i panTro4.chr17 C 0 I 752 s ponAbe2.chr17_random 3498555 178 - 17838096 CCCACTC-CTC-AGGGCG------TCT---------------GGGAGGCCTGGAGACACCAGCACCCAACCCGC----CCTCCCTTGG--CTTGCAGGACAGAC-ATCA-CCCTGCCCCTCTCTTTCCCTCTCAGCAGCCCCTCCCCA------GGCTCGG--GGGTCCTCAGTCCAGGCCTTCATCTTCCCATTCTCATCTG-----TTTCTT----TGCTCCCC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37521 178 + 80904711 CCCACTC-CTC-AGGGCG------CCT---------------GGGAGGCCTGGAGGCACCAGCACCCAAGCCAC----CCTCCCCTGG--CCTGCAGGACAGAC-ATCA-CCCTGTCCCTCTCTCTCCCCCTCAGCAGCCCCTCCCCA------GGCTCGG--GAGGCCTCCGTCCAGGCCTTCATCTCCCCGTTCTCATCTG-----TTTCTT----TGCTCCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 37250 178 + 80997621 CCCACTC-CTC-AGGGTG------CCT---------------GGGAGGCCTGGAGGCACCAGCACCCAAGCCAC----CCTCCCCTGG--CCTGCAGGACAGAC-ATCA-CCCTGTCCCTCTCTCTCCCCCTCAGCAGCCCCTCCCCA------GGCTCGG--GAGGCCTCCGTCCAGGCCTTCATCTCCCCGTTCTCATCTG-----TTTCTT----TGCTCCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 48268 177 + 74645514 CCCACTC-CTC-AGGGTG------CCT---------------GGGAGGCCTGGAGGCACCAGCACCCAAGCCAC----CCTCCCCTGG--CCTGC-GGACAGAC-ATCA-ccctgtccctctctctccctctcagcagcccctcccca------ggctCGG--GAGGCCTCTGTCCAGGCCTCCATCTTCCCATTCTCATCTG-----TTTCTT----TGCTCCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 40887 178 + 75148670 CCCACTC-CTC-AGGACG------TCT---------------GGGAGGCCTGGAGGCACCAGCACCCAACCCAC----CCTCCCCTGG--CCTGCAGGACAGAC-ATCA-CCCTGTCCCTCTCTTTCCCTCTCAGCAGCCCCTCCCCA------GGCTCGG--GAGGCCTCCGTCCAGGCCTTCACCTTCCCATTCTCATCTG-----TTTCTT----TGCTCCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854502 154 - 1291538 -----------------A------TCT---------------GGGAGGCTTAGAGGCACCGGCACCCAACCTGC----CCTCCCTTGG--CCTGCAGGACAG---------------CCCCTCTTTCCCTCTCAGCAGCTCCTCCCCA------GCCTCA---GGGGCCTCCGTCCAGGCCTTCATCCTCCCATTCTCGTCTGTTTCTTTTCTT----TGCTCCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785789 156 + 122082543 TTAGGGA-CTCTAGGGAG------CCTAGCAGCTGGAACTTGGAGAGACCCGGGGACAGTGGAATCCAACCTCCTTTGTCTCCCCCAACCCCCGCAAGACAT----TCT-CCATATCTCCCCCTT----CCTCAGCGACCCCT-CCCA------GGCTCCA--AAAGCT----GCCTGGCTTTCT----------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15615036 200 - 61074082 CCCACTCACTC-CGGGTGGGAACCTTC---------------AGGAGGCCAGAGGCAACCA--ATCCAACCCCT----GCCCCCCTGG--CCATCAGGACAGCCTGTCAGCTCTCCCCTTCCCTCCTCCCTGCCACAGGCCCTCCCCAGCTCTTGCCCCAC--ACTGCTGTCCCCCACGCCTTCCTCCTTTCATTCTCTTCTTGCCTTTTTCTTCTACTCCTTCCC i canFam3.chr9 I 9 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=847521.000000 s hg38.chr17_GL383563v3_alt 111250 328 + 375691 GCAATGCCTGACTGTCCAA----GGCATTTCTTGGGGTTGGGTATTCAAGAAGGTTTAAAGAAGAATTCCTTCCTGGTCCCGCACCCCACACAGCGCAGACATCC-AAAAGCCTGGACAGGAACCTGGGGA----GTGGTGTGGTCTGGCCTCCCTGACCTAGGCCCTCTT--GAGGACCCCGGGGCAGGGAATTTGGGTGC-----AGGCTGGC-GGGGCCTACCTTGGCCTTGGTGATGGTGCAGTGGAGGGCGTTGTTCTCCTGGTCATACAGCAGGCTGAAGTCCAGCGTGCCCAGGGCAGCTGCGGACAGAGGAGG-GCACAGGTCCCACCCTGGCCGCAT s panTro4.chr17 109249 325 + 82630442 GCAATGCCTGACTGTCCAA----GGCATTTCTTGGGGTTGGGTATTCAAGAAGGTTTAAAGAA---TTCCTTCCTGGCCCCGCACCCCACACAGCACAGACATCC-AAAAGCCTGGACAGGAACCTGGCGA----GTGGTGTGGTCTGGCCTCCCTGACCTAGGCCCTCTC--AAGGACTCCGGGGCAGGGAATTTGGGGGC-----AGGCTGGC-GGGGCCTACCTTGGCCTTGGTGATGGTGCAGTGANGGGCGTGTTTCTCCTGGTCATACAGCAGGCTGAAGTCCAGCGTGCCCAGGGCGGCTGCGGACAGAGGAGG-GCACAGGTCCCACCCTGGCCGCAT i panTro4.chr17 I 752 C 0 s ponAbe2.chr17_random 3498733 309 - 17838096 CCACTGCCTGACTGTCCAG----GGCGTTTCTTGGGGTTGGGTATTCAAGAAGGTTTAAACAAGAATTCCTTCCTGGCCCCGCACTCCACACAGCACAGACATCC-AAAAGTCTGGACAGGAACCTGGGGG----CTGGTGTGGTCTGGCCTCCCTGACCTA---------------------GGGCAGGGAATTTGGGGGC-----AGGCTGGC-GGGGCCTACCTTGGCCTTGGTGATGGTGCAGTGGAGGGCGTTGTTCTCCTGGTCGTACAGCAGGCTGAAGTCCAGCGTGCCCAGGGCGGCTGTGGACAGAGGAGG-GCACAGGTCCCACCCTGGCCGCAT i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 37699 322 + 80904711 TCAATGCCTGACTGTCCAG----GGCGTTTCTTGGAGTTCGGTATTCAAGAAGGTTTAAACAAGAATTCCTTCCTGG--------CCCACACAGCTCAGACATCC-GAAAGCCTGGACAGGAACCCGGGGG----GTGGTGTGGTCTGGCCTCCCTGACCCAGGCCCTCTCTTGCGGACCCCGGGGCAGGGACTTTGGGGGC-----AGGCCGGC-GGGGCCTACCTTGGCCTTGGTGATGGTGCAGTGGAGGGCGTTGTTCTCCTGGTCGTACAGCAGGCTGAAGTCCAGCGTGCCCAGGGCGGCTGCGGACAGAGGAGG-GCACAGGTCCCACCCTGGCCACGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 37428 322 + 80997621 TCAATGCCTGACTGTCCAG----GGCGTTTCCTGGAGTTCGGTATTCAAGAAGGTTTAAACAAGAATTCCTTCCTGG--------CCCACACAGCTCAGACATCC-GAAAGCCTGGACAGGAACCCGGGGG----GTGGTGTGCTCTGGCCTCCCTGACCCAGGCCCTCTCTTGCGGACCCCGGGGCAGGGACTTTGGGGGC-----AGGCCGGC-GGGGCCTACCTTGGCCTTGGTGATGGTGCAGTGGAGGGCGTTGTTCTCCTGGTCGTACAGCAGGCTGAAGTCCAGCGTGCCCAGGGCGGCTGCGGACAGAGGAGG-GCACAGGTCCCACCCTGGCCACGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 48445 320 + 74645514 TCAATGCCTGACTGTCCAG----GGCGTTTCTTGGAGTTCGGTATTC---AAGGTTTAAACAAGAATTCCTTCCTGG-------CCCCACACAGCTCAGACATCC-GAAAGCCTGGACAGGAACCCGGGGG----GTGGTGTGGTCTGGCCTCCCTGACCTAGGCCCTCTCTTGCAGACCCCGGGGCAGGGACTTTGGGGGC-----AGGCCGGC-GGGGCCTACCTTGGCCTTGGTGATGGTGCAGTGGAGGGCGTTGTTCTCCTGGTCGTACAGCAGGCTGAAGTCCAGCGTGCCCAGGGCGGCTGCGGACAGAGGAGG-GCACAGCTCCCACCGTGGCCACGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 41065 334 + 75148670 TCAGTGCCTGAGTGTCCAG----GGCGTTTCTTGGAGTTCGGTATTCAAGAAGGTTTAAACAAGAATTCCTTCCTGGCCCCACACCCCACACAGCTCAGACATCC-GAAAGCCTGGACAGGAACCCGGGGGTGGTGTGGTCTGGTCTGACCTCCCTGACCCAGGCCCTCTCTTGCGGACCCCGGGGCAGGGACTTTGGGGGC-----AGGCCGGC-GGGGCCTACCTTGGCCTTGGTGATGGTGCAGTGGAGGGCGTTGTTCTCCTGGTCGTACAGCAGGCTGAAGTCCAGCGTGCCCAGGGCGGCTGCGGACAGAGGAGC-GCACAGGTCCCACCCTGGCCACGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854656 322 - 1291538 GAAATGCCTGACTAACCAG----GGTGTTTCTTGGGGTTGGGTATTC---AAGATTTAGGCAAGAACTTTTTCCTGGCCCCACACCTCACACTGCACAGACATCC-AAAAGCCTGGACAGTAAAT-----G----GTGGGGGGGTCTGGCCTCCCTAACCTTGGCTCTCTCTTGAGGACCCCAGGGCACGGACTTTGGGGGC-----AGGTTGGC-AGAGCCTACCTTGGCCTTGGTGATGGTGCAGTGGAGGGCATTGCTCTCCTGGTCATACAGCAGACTGAAGTCCAGGGTGCCCAGGGCAGCTGTGAACAGAGGAGA-GCACAGGTCCCACACTGGCCACGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75785945 268 + 122082543 GTAATCCCACCCTATCCCACTCTGGCCAATCTGGGAAGTGGGCAGCT----------------------------------GCACTCTATATAGCAGGGACACCAGGGAAGTCTGGACAG------ATGGA----CGGGCAGGACCCTGCCTCCTT--CCT--------------GAACCCCGAG----------CTGAGGC-----TGGC--GC-AGAGCCTACCTTGGCCTTGCTGATGGTGCAGTGCAGTGCGTTGTTCTCCTGGTCATAGAGCAGACTGAAGTCCAGCGTACCCAGGGCGGCTGTGGGAAGAGGAGGAGGAGGGGTCACACGCTGGCTGCAT i mm10.chr11 C 0 I 1785 s canFam3.chr9 15615236 300 - 61074082 TGGATGTCTGGCTGC---G----GGAGGCTCTTAG-----GGCAGCTGAGGAGATTTAGGCAAGATG------------------CACCCATGGTGCAGATGCCA-CAGAGCCTGGACAGGAAAC-----A----GTGTGGGGGACAGGCCCTCGGACCTCAGCCCCTCACCTGC--ACCCAAGGCCCTGGACCCGGGGGACCGAGGCGGCCGGTGGGGGCCTACCTTGGCCTTGCTGATGGTACAGTGGAGGGCGTTGTTTTCCTGGTCGTAGAGCAGGCTGAAATCCAGCGTGCCCAGGGCAGCTGCGGACAGAGG----GCTCAGGTCATGCTCTGGCCACAC i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=205188.000000 s hg38.chr17_GL383563v3_alt 111578 80 + 375691 CTTGGAGAGGCTTCGCCTGCCCCTGTGAGACCAGATGAGCCTGGCCTGGGCAGGTGCCACCGTTCCATGGCGgctgccac s panTro4.chr17 109574 80 + 82630442 CTTGGAGAGGCTTCGCCTGCCCCTGTGAGACCAGATGAGCCTGGCCTGGGCAGGTGCCACCGTTCCATGGCGGCTGCCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3499042 80 - 17838096 CTTGGAGAGGCTTCGCCTGCCCCTGTGAGGCCGGATGAGCCTGGCCTGGGCAGGTGCCACCGTTCCATGGCGGCTGCCGC i ponAbe2.chr17_random C 0 C 0 s rheMac3.chr16 38021 80 + 80904711 CTTGGAGAAGCTTCACTTGCCCCTGTGAGGCCGGATGGGCCTGGCCTGGGCAGGTGCCACCGTTCCATGGCGgctgccac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 37750 80 + 80997621 CTTGGAGAAGCTTCACTTGCCCCTGCGAGGCCGGATGGGCCTGGCCTGGGCAGGTGCCACCGTTCCATGGCGgctgccac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 48765 80 + 74645514 CTTGGAGAAGCTTCACTTGCCCCTGTGAGGCCGGATGGGCCTGGCCTGGGCAGGTGCCACCGTTCCATGGCGGCTGCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 41399 80 + 75148670 CTTGGAGAAGCTTCACTTGCCCCTGTGAGGCCGGATGGGCCTGGCCTGGGCAGGTGCCACCGTTCCATGGCGgctgccac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 854978 78 - 1291538 CTTGGAGAAGTGTCACCTGCCCATGT--GGCCAGATGAGCCTGGCCTGAGCAGGTGCCACCACCCCATGGCagctgccac i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15615536 66 - 61074082 AGTGGAGGAGAGACACCCACCCCTGTGCGGTGGGACA--------------AGGTGCCACATTGCCACAGTGACTGCCAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75786213 1785 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=1257207.000000 s hg38.chr17_GL383563v3_alt 111658 583 + 375691 caaccaagcacctgctctatgccagcccct-cacccatcctcccagtcccacccaaccctgggaagtcacaataatctccccactttccaga----ggaggagctgagacccagagaggtcaggtgggtcact--------------------------------------------------ccagttccctgt--ctgg--------------cccagtgTGTGGTCCACCTGAGCTGGGCACCCAG----------CCAAAG------GAGTTCCTGCCCTCC--TGGTGCAACTG----CCAG------TCTGGGccccgtgcctcagt--------ttccctcacctgtgaaatgTCACAAGGATCACAC---AAGGCGGAGGAGACGAGGCTTTGAGAGG-AAC-AGGTCCTGGCCAGGAAGATCAGCTGATTTGCTCAACAGTCCCCCAGCCAACACACAGGACTGCAGCTCCTCTGTCTCTCTGGCCCGTTGGGAACCCCGAGCAGGCCGTGAGGAGCCAGCTGGGTCCTCATACTGCTGCCCCCAAGTCTCTCAATGGCAGT-GGTAACTCCCAAAAGCCGGGGGG-AGGGTGCAGCCATAATTGGGGGAGGTTGCAGCCATAATTGGGTGCAGC-TGCCTCCCTCCCCGGGGGCAATCACTCATAGCAGCTGTGGCTTTCCATGCAGA s panTro4.chr17 109654 585 + 82630442 CAACCAAACACCTgctctatgccagccccttcacccatcctcccagtcccacccaaccctgggaagtcacaataatctccccactttccaga----ggaggagctgggacccagagaggtcaggtgggtcact--------------------------------------------------ccagttccctgt--ctgg--------------cccagtgtgtggcccacctgagctgggcacccag----------ccaaag------cagttcctgccctcc--tggtgcaactg----ccag------tctgGGccccgtgcctcagt--------ttccctcacctgtgaaatgTCACAAGGATCACAC---AAGGCGGAGGAGACCAGGCTTTGAGAGG-GAC-AGGCCCTGGCCAGGAAGATCAGCTGATTTGCTCAACAGTCCCCCAGCCAACACACAAGACTGCAGCTCCTCTGTCTCTCTGGCCCGTTGGGAACCCCGAGCAGGCCGTGAGGAGCCAGCTGGGTCCTCATACTGCTGCCCCCAAGTCTCTCAATGGCAGT-GGTAACTCCCAAAAGCCGGGGGGGAGGGTGCAGCCATAATTGGGGGAGGTTGCAGCCATAATTGGGTGCAGC-TGCCTCCCTCCCCGGGGGCAATCACTCATAGCAGCTGTGGCTTTCCATGCAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17_random 3499122 565 - 17838096 CAACCAAGCACCTGCTCTATACCAGACCCG-CACCCATCCTCCCAGTCCCACCcaaccctgggaagtcacaatattctccccactttccaga----ggaggagctgagacccagagaggtcaggtgggtcact--------------------------------------------------ccagttcCCTGT--CTGG--------------CCCAGTGTGCGGCCCACCTGAGCTGGGCACCCAG----------CCAAAG------GAGTTCCTGCCCTCC--TGGTGCAACTG----CCAG------TCTGGGCCCCATGCCTCAGT--------TTCCCTCACCTGTGAAATGTCACAAGGATCACATGAGAAGGCAGAGGAGACGAGGCTTTGAGAGG-GAC-AGGCCCTGGCCAGGAAGATCAGCTGATTTGCTCACCAGTCCCCCAGCCAACACACAGGACTGCAGCTCCTCTGTCTCTCTGGCCCCTTGGGGACCCCGAGCAGGCTGTGAGGAGCCAGCTGGGTCCTCATACTGCTGCCCCCAAGTCTCTCAATGGCAGT-GGTAACTCCCAAAAGCCAGCGGG----------------------GAGGGTGCAGCCATAATTGGGTGCAGCATGCCTCCCTCCCCGGGGGCAATCACTCACAGCAGCTGTGGC-TTCCATGCAGA i ponAbe2.chr17_random C 0 N 0 s rheMac3.chr16 38101 520 + 80904711 cgatggagcaccggctgtatgccagcccct-cacccatcctcccagtcccacccgacctcgggaagttacaatattctcccccctttccaga----ggagcggctgagacccagagaggttGGGGGGGTCACG--------------------------------------------------CCAGTCCCCTGT--CTGG--------------CCCA--GTGTGG-CCGCCTGAGCTAGGCGCC--------------CAAAG------GAGTTCCCGCCCTAC--TGGTGCAACTG----CCAG------TCTGGGCCCCGTGCCTCAGT--------TTCCCTCACCCGTGAGATGTCACAAGGATCACATGAGAGGGCAGAGGAGACGAGGCTTGGAGAGA-GGC-AGGCCCTG-------------------------------------GCCCATACACAGGACTGCGGCTCCTCTGCCTCTCTGGCCCCTTGGGGACCCCGAGGAGGCTGTGAGGAGTCAGCTGGGTCCTCACACTGCTGCCCCCAAGTCTCTCAATGGCAGT-GATAACTCCCTACAGCCAGGGGG-----------------------AGGGTGCAACCGTAATTGGGTGCAGC-TGCCTCCCTCCCCGGGGGCAATCACTCAGAGCAGCTGTGGCTTTCCATGCAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 37830 524 + 80997621 cgatggagcaccggctgtatgccagcccct-cacccatcctcccagtcccacccgacctcgggaagttacaatattctcccccctttccaga----ggaggggctgagacccagagaggttGGGGGGGTCACG--------------------------------------------------CCAGTCCCCTGT--CTGG--------------CCCA--GTGTGG-CCGCCTGAGCTGGGCGCCCAG----------TCAAAG------GAGTTCCCGCCCTAC--TGGTGCAACTG----CCAG------TCTGGGCCCCGTGCCTCAGT--------TTCCCTCACCCGTGAGATGTCACAAGGATCACATGAGAGGGCAGAGGAGACGAGGCTTGGAGAGA-GGC-AGGCCCTG-------------------------------------GCCCATACACAGGACTGTGGCTCCTCTGCCTCTCTGGCCCCTTGGGGACCCCGAGGAGACTGTGAGGAGTCAGCTGGGTCCTCACACTGCTGCCCCCAAGTCTCTCAATGGCAGT-GATAACTCCCTACAGCCAGGGGG-----------------------AGGGTGCAACCGTAATTGGGTGCAGC-TGCCTCCCTCCCCGGGGGCAATCACTCAGAGCAGCTGTGGCTTTCCATGCAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 48845 524 + 74645514 TGACGGAGCACCGGCTGTATGCCAGCCCCC-CACCCATCCTCCCAGTCCCACCCGACCCCGGGAAGTTACAATATTCTCCCCCCTTTCCAGA----GGAGGGGCTGAGACCCCGAGAGGTCgggggggTCACG--------------------------------------------------CCAGTCCCCTGT--CTGG--------------CCGT--GTGTGG-CCGCCTGAGCTGGGCGCCCAG----------TCAAAG------GAGTTCCTGCCCTAC--TGGAGCAACTG----CCAG------TCTGGgccccgtgcctcagt--------ttccctcaccCGTGAGATGTCACAAGGATCACATGAGAGGGCAGAGGAGACGAGGCTTGGAGAGA-GGC-AGGCCCTG-------------------------------------GCCCATACACAGGACTGAggctcctctgcctctctggccCCTTGGGGACCCCTAGGAGGCTGTGAGGAGTCAGCTGGGTCCTCACACTGCTGCCCCCAAGTCTCTCAATGGCAGT-GATAACTCCCTACAGCCGGGGGG-----------------------AGGGTGCAACTGTAACTGGGTGCAGC-TGCCTCCCTCCCCTGCGGCAATCACTCACAGCAGCTGTGGCTTTCCATGCAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 41479 523 + 75148670 cgacggagcaccggctgtatgccagcccct-cacccatcctcccagtcccacccgaccccgggaagttacaatattctccccgctttccaga----ggaggggctgagacccagagaggttGGGGGGGTCACG--------------------------------------------------CCAGTCCCCTGT--CTGG--------------CCCAGTGTGTGG-CCGCCTGAGCTGGGCACCCAG----------TCAAAG------GAGTTCCCGCCCTAC--TGGTGCAACTG----CCAG------TCTGGGCCCCGTGCCTCAGT--------TTCCCTCACCTGTGAGATGTCACAAGGATCACATGAGAGGGCAGAGGAGACGAGG-TTGGAGAGA-GGC-AGGCCCTG-------------------------------------GCCCATACACAGGACTGCGGCTCCTCTGCCTCTCTGG-CCTTTGGGGACCCCGAGGAGGCTGTGAGGAGTCCGCTGGGTCCTCACACGGCTGCCCCCAAGTCTCTCAACGGCAGT-GATAACTCCCTACAGCCGGGGGG-----------------------AGGGTGCAACCGTAATTGGGTGCAGC-TGCCTCCCTCCCCGG-GGCAATCACTCACGGCAGCTGCGGCTTTCCATGCAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 855056 518 - 1291538 gaactgaggacctactgcaggccagcccct-cacccatcctcccagtcccacccaaccctgggaagtcacaccattctcac--ctttccaga----ggaggaactgaggcccagagaggtcaggtgGG-----------------------------------------------------------------------------------------CA--CTGAGGCCCGCCTGAGCTGAGCACCAGG----------CCAAAA------GACTTCCTGCCCTCC--TGGTGCAACTG----CAAG------TCTAGGCCCCATGTCTCAGT--------TTCCCTCACCTGTGA-ATGTCATAAGGATCACACGAGAAGGCAGAGAAGAGGAGGCTTTGAGAGG-AGC-AGG-CCTGGCCAGGAAGACTAG-----------------TCCCCAGGCAATGCACAAGACTGCAACTCCTCTGTCTCTCGGGCCCCTTGGGGACCCTAGACAGGCTGTGAGGAGCCAGCTGCATCCTCAGACCGCTGCCCCTGAGTCTCTCAACCGCAGC-AGCAACTCCCAAAAGCCAGGGGG-----------------------AGGGTGCAGCCATAATTGGGTGCAGC-TGCCTCCCTCCCTGGGGTCAACCACGCACAGCAGCTGTGGCCTTCTATGCAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75787998 585 + 122082543 CAGCTGAGCAGCTACAGTGTGGCAGTCTCT-TTCTCTCTCCCACTGAAACACACAACCCTGGGAGG----GATGGTTCCTGTCACTACCAGA----TGAG-----GAGGCCCACAGGTTCTGGGTGCATTACT--------------------------------------------------TAAGTCCCATAT--GTGGTAACCTTATCTTAACCAGGTAGGTGGCCCA---GAAAGGGGCTCTCAAACCTTCCTTCTCACTG------TCTGTCCTGTCCCACGGTGGTGCTATTGTGTACCAGACAGCTTTCGGTACCCTTGCTTCAGTGCCCCCTCTCCCCTCCCCCAGGCAATGACAC-ATAATGGTGTGAGAAGGCAGAGGA---CAGGCTCTGAGAGGCTAC-AGGACCTGACCAGCCTGAGTGGCTGA-CTGTTGATTGAGCCCCCAGGTGACAAGGGACACCACAGCTCCCTAGTCTC-CAGGGCCCTTAGAGATCGTAAGCGGGCAGTGACAAGCCAGCTGGGTCCTCATGCTGCTGCCTCCAAGTCT-TCAAAGGCATT-GGTAAGTCCCGAGGGCCAGGCAG-----------------------AGGACACAGCAATAATTGGGTTCAGC-TGCCACCTT-----AGGAACGTCACTTGCTACAGCTGTGTCCTGCCATGTCCC i mm10.chr11 I 1785 C 0 s canFam3.chr9 15615602 588 - 61074082 CAATTGAGCACCTACTGGGTGCAATCCCTC-CGCCCAGCCTCCCAGTGCTAC-CAGCACAGCCAGG-------------------TTCCAGATGCGGGAGGAGTGGAGGCTCAGTGAGGTTAGGTCGGCCCCAGTCACCACAGGTGGTGGCCCAAGTCAAACCCAGGCAGTAGGCCCCACAGCCCAGGCCCCTGTGGCTGG--------------TCCC--ATGTTGTGCAATCATACAGGGCACTCAG----------CCAAAGGTCCCTGTCCTCCTGCCCTCT--TCATGCAACTG----CCAG------TCTTGGCGCCATGCCTCGGT--------TTCCCTGA-TGGTTAACTGTCACAAGGATTGTATAGGGAGGCAG----GACAGGGCCTTGAGAAC-CTCTGGGCCCTGGCTGGGCTGACAGGCTGATCC----------ACCCCCAACAACACTTAGCGCTGCAGCTCCCCAGTCTCTCCATCCCTTGGGGGGCCCTGGGCAGGCTGCCAGAAGCCAGCTGGGTCCTCACGCTACAACCTGCCAGCCTCTTCAAGGCAGTGGGTGAGTCCCTAGGGGCGGGCAG-----------------------AGCGGGCAGCGATAACTAGGTGCAGC-CATAGCCAT---CAGGGACAATCACGCGTGGCAGCTGTGGCTCGTTGTGCTCA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=2258925.000000 s hg38.chr17_GL383563v3_alt 112241 1332 + 375691 AGCGGCTCCC-AGCATGGAGGCCAAGGTGATGGTTGGGGCAGAGCTTGGAGATGATGG--TGGGGG---GCAGAGCTTAGTGG--CAGTCCGCAGACAGCAAGATGCACATTCACAGATGGCTTCAGAAGCCCAGAGCCTGCTCCCAGGCTGCAGGGCTGGTCAAATGGTGTC------------------------ACattccttcattatttaccaagtgt--ttacaacatgccagactctagggg-atggacatctgtgaggcagagtccctatcccaaggaaagcacagcttaaggggaggaacaaatggaaataatttgccgcagtagagtctggtgagccgggagccatggggagccca-------------------tgtgaattgggaccaccagggaaggcttcctggaggaggtgatgcttcacctgagccatgagggatgagtaggagttggccaatggcaaagaggggctgggggaggtgacgattccaaccacaggccaaccagcaggtacgggcttagtggctggtgtgatcccggGATAAGGGAAGGCCAAACTTGAAAGACTGTGTTC---TTCAGG------CTCTGAGCTAGGCTCCCAACCTGGATCTAGATCCAATTA--------CGGCCACACCTGAccaggcccat-catttacatctcttctgcggctgctttcctacttcagaagcagaccctacggcctgcacagctgaaaatatttactatccagcccttctttatagaacaagtttgcagatctctgG-----GCGAGTGCTGGGC----CCAGGCATAACAAAGTTTCTTGGGTCTGCAGGGAAATTGGCTAATGAAAGGCCACGAGTGTGGAGTGTCCTTTATTCTGAGCTGGTGATGGGA-GTGGCATTTGTCTAGATCATCCCCTTCTAACACGGGTCA-----GGCACATGTCTCTGTCTT----CG--------CA--gcagt-------gtggggtgcaagacctgc----cctctgacatcagtctcc-tcggttcaaatcccagcgt-gcacttccctgctgtgtggc------cagcttatctaacgtctttatgcctcagttt-actcatctgtgaaatggagacaacgatagtatccacctcacag--c---------acagtgtgcctgcggtgtaggaggtgctcagtagatcattatagaaggagcagatAC-CTATGGTGGGTTTTCTAGCTAACAGTACTGGCTTCTCTAAGACCCATTCTGGAATGAAACTGTCCTCAATTGGCTCATTTCCCTCCCTGCCTTTGGGAACAGAACATACAAATAGTCACTTAAATTTTT-TGAATAACCTGAGTCATTGCTATGGCCACGATGACTCTTCCGTATGTCACGGTCATGTTCCAGAGGCAAAAGGGGACACGAAGCAACCCCTGCACCA------GAGGGTCCCGGG s panTro4.chr17 110239 1333 + 82630442 AGCGGCTCCC-AGCATGAAGGCCGAGGTGATGGTGGGGGCAGAGCTTGGAGATGATGG--TGGGGG---GCAGAGCTTGGGGG--CAGTCCGCAGACAGCAAGATGCATATTCACAGATGGCTTCAGAAGCCCAGAGCCTGCTCCCAGGCTGCAGGGCTGGTCAAATGGTGTC------------------------ACattccttcattatttaccatgtgt--ttacaacatgccagactctagggg-atggacatctgtgaggcagagtccctacccgaaggaaagcacagcctaaggggaggaacaaatggaaataatttgccgcagtagagtctggtgagccgggagccatggggagccca-------------------tgtgaattgggaccaccagggaaggcttcctggaggaggtgatgcttcacctgagccatgagggatgagtaggagttggccaatggcaaagaggggctgggggaggtgacgattccaaccacaggccaaccagcaggtgcgggcttagtggctggtgtgatccgggGATAAGGGAAGGCCAAACTTGAAAGACTGTGTTC---TTCAGG------CTCTGAGCTAGGCTCCCAACATGGATCTAGATCCAATTA--------CGGCCACACCTGAccaggcccat-cattaacatctcgtctgcggctgctttcctacttcagaagcagaccctacggcctgcacagctgaaaatatttactatccagcccttctttatagaacaagtttgcagatctctgG-----GCGAGTGCTGGGC----CCAGGCATAACAAAGTTTCTTGGGTCTGCAGGGAAATTGGCTAATGAAAGCCCACGAGTGTGGAGTGTCCTTTATTCTGAGCTGGTGATGGGA-GTGGCATTTGTCTAGATTATCCCCTTCTAACACGGGTCA-----GGCACATGTCTCTGTCTT----CG--------CA--gcagt-------gtggggtgcaagacctgc----cctctgacatcagtctcc-tcggttcaaatcccagcgt-gcacttccctgctgtgtggc------cagcttatctaacgtctttatgcctcagttt-actcatctgtgaaatggagacaacgatagtatccacctcacCG--C---------ACAGTGTGCCTGCGGTGTAGGAGGTGCTCAGTAGatcattacagaaggagcagatcc-ctatggtgagttttccagctaacagtactggcttctctaagacccattctggaatgaaactgtcctcaattggctcatttccctccctgcctttgggaacagaacatacaaatagtcacttaaacttttctgaataacctgagtcattgctatgGCCACGATGACTCTTCCGTATGTCACGGTCATGGTCCAGAGGCAAAAGGGGACACGAAGCAACCCCTGCACCA------GAGGGTCCCGGG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 38621 1278 + 80904711 GGCGGCTCCC-AGCATGAAGGCCGAGG-------------------------TGATGG--TGAGGG---GCAGAGCTTGGGGG--CAATCCCCGGACAGCAAGATGCGCATTCACAGAGGGCCTCAGAAGCCCAGAGCCTGCTCCCAGGCTGCAGGGCTGGTCAACTGGTGTC------------------------ACattcattcattatttaccaagtgt--tcacaatacgccagactctagggg-atggacatctgtgaggcagagtccctaccccaaggaaagcacagcttaaggggaggaacaaaaggaaagaatttgccgcagtggagtctggtgagccaggagccatggggagccca-------------------tgtgaattgggacaatcagggaaggcttcctggaggaggtggtgtttcacctgagccatgagggatgagtaggagttcgccaacggcacagtggggctgggggaggtgatgattccaaccacagggcaaccagcaggtgcgggcttaacgactggtgtgatcctggGATAAGGGAAGGCCAAACTTGAAAGATTCTATTC---TTCAGG------CTCTGAGCTACGCTCCCAACATGGATCTAGATCCAATTA--------TGGCCACACCTGACTGGgcccat-catttacatctcgtctgtggctgctttcctgcctcagaagcagaccatatggcctgcacagctgaaaatatttactgtccggcc---ctttatagaacaagtttgcagatctctgG-----GTGAGTGCTGGGCCCAGCCAGGCATAATACAGTTTCTTGGGTCTGCAGGGAAATTGGCTAATGAAAGGCCATTGGTGTGG----------------AGCTGGTGATGGGA-GTGGCATTTGTCCAGGTCACCCCCTTCTAACACGGATCA------GCACGTGTCTC--TCTT----TG--------CA--GCAGT-------GTGGGGTGCAAGACCTGC----Cctctgacatcggtctcc-cgggttcaaatcccagcat-gcacttccctgctgtgtgac------cagctgatctaacgtctttatgcctcagttt-actcatctgtcaaatggagacaacggtggtatccacctcacagCAC---------ACAGTGTGCCTGGGGTGTAGGAGGGGATCCGTAGATCACTACAGAAGAAGCAGATCC-CTATGGTGGGTTTTCTAG------GTACTGGCTTCTACGAGACccgttctggaatgaaactgtcctcgactggatcatttccctccctgcctttgggaacagaacatacaaatggtcacttaagcttttctgaataacctgagtcgccgctatgGCTACGATTACTCTTCCGAACGTCACAGTCATAGTCCAGATGCGAACCGGGACATGAAGTA--------ACCA------GAGGGTCCCGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 38354 1278 + 80997621 GGCGGCTCCC-AGCATGAAGGCCGAGG-------------------------TGATGG--TGAGGG---GCAGAGCTTGGGGG--CAATCCCCGGACAGCAAGATGCGCATTCACAGAGGGCCTCAGAAGCCCAGAGCCTGCTCCCAGGCTGCAGGGCTGGTCAACTGGTGTC------------------------Acattcattcattatttaccaagtgt--tcacaatacgccagactctagggg-atggacatctgtgaggcagagtccctaccccaaggaaagcacagcttaaggggaggaacaaaaggaaagaatttgccgcagtggagtctggtgagccaggagccacggggagccca-------------------tgtgaattgggacaatcagggaaggcttcctggaggaggtggtgtttcacctgagccatgagggatgagtaggagttcgccaacggcacagtggggctgggggaggtgatgattccaaccacaggccaaccagcaggtgcgggcttaacgactggtgtgatcctggGATAAGGGAAGGCCAAACTTGAAAGATTCTATTC---TTCAGG------CTCTGAGCTACGCTCCCAACATGGATCTAGATCCAATTA--------TGGCCACACCTGACTGGgcccat-catttacatctcgtctgcggctgctttcctgcctcagaagcagaccatatggcctgcacagctgaaaatatttactgtccggcc---ctttatagaacaagtttgcagatctctgG-----GTGAGTGCTGGGCCCAGCCAGGCATAATACAGTTTCTTGGGTCTGCAGGGAAATTGGCTAATGAAAGGCCATTGGTGTGG----------------AGCTGGTGATGGGA-GTGGCATTTGTCCAGGTCACCCCCTTCTAACACGGATCA------GCACGTGTCTC--TCTT----TG--------CA--GCAGT-------GTGGGGTGCAAGACCTGC----Cctctgacatcggtctcc-cgggttcaaatcccagcat-gcacttccctgctgtgtgac------cagctgatctaacgtctttatgcctcagttt-actcatctgtcaaatggagacaacggtggtatccacctcacagCAC---------ACAGTGTGCCTGGGGTGTAGGAGGGGATCCGTAGATCACTACAGAAGAAGCAGATCC-CTATGGTGGGTTTTCTAG------GTACTGGCTTCTACGAGACccattctggaatgaaactgtcctcgactggatcatttccctccctgcctttgggaacagaacatacaaatggtcacttaagcttttctgaataacctgagtcgccgctatgGCTACGATTACTCTTCCGAACGTCACAGTCATAGTCCAGATGCGAACGGGGACATGAAGCA--------ACCA------GAGGGTCCCGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 49369 1267 + 74645514 GGCGGCTCCC-AGCATGAAGGCCGAGG-------------------------TGATGG--TGGGGG---GCAGAGCTTGGGGG--CAATCCCCGGACAGCAAGAAGCGCATTCACAGAGGGCCTCAGAAGCCCAGAGCCTGCTCCCAGGCTGCAGGGCTGGTCAACTGGTgtc------------------------acattcattcattatttaccAAGTGT--TCACAATACGCCAGACTCTAGGGG-ATGGACACCTGTGAGGCAGAGTCCCTACCCCAAGGAAAGCACAGCTTAAGgggaggaacaaaaggaaagaatttgCGGCAGTAGACTCTGGTGAGCCAGGAGCCATGGGGAGCCCA-------------------TGTGAATTGGGaccatcagggaaggcttcctggag-----------------gagccATGAGGGATGAGTAGGAGTTCGCCAACGGCacagtggggctgggggaggtgaTGATTCCAACCACAGGCCAACCAGCAGGTGCGGGCTTAACGACTGGTGTGATCCTGGGATAAGGGAAGGCCAAACTTGAAAGACTCTATTC---TTCAGG------CTCTGAGCTACGCTCCCAACATGGATCTAGATCCAATTA--------TGGCCACATCTGACTGGGCCCAT-CATTTACATCTCGTCTGCGGCTGCTTTCCTGCCTCAGAAGCAGACCATATGGCCTGcacagctgaaaatatttactgtccGGCC---CTTTATAGAACAAGTTTGCAGATCTCTGG-----GTGAGTGCTGGGCCCAGCCAGGCATAATACAGTTTCTTGGGTCTGCAGGGAAATTGGCTGATGAAAGGCCATGGGTTTGG----------------AGCTGGTGATGGGA-GTGGCATTTGTCCAGATCACCCCCTTCTAACACGGATCA------GCACGTGTCTC--TCTT----TG--------CA--GCAGT-------GTGGGGTGCAAGACCTGC----CCTCTGACATCAGTCTCC-CGGGCTCAAATCCCAGCAT-GCACTTCCCTGCTGTGTGAC------CAGCTGATCTAACGTCtttatgcctcagttt-actcatctgtcaaatggagacAACGGTGGTATCCACCTCACAGCAC---------ACAGTGTGCCTGGGGTGTAGGAGGGGATCAGTAGATCACTACAGAAGAAGCAGATCC-CTACGCTGGGTTTTCTAGCTAACAGCACTGGCTTCTATGAGACCCGTTCTGGAATGAAACTGTCCTCGACTGGTTCATTTCCCTCCCTGCCTTTGGGAACAGAACATACAAATGGTCACTTAAGCTTTTCTGAATAACCTGAGTCACTGCTATGGCTACGATTACTCTTCCGAACATCACAGTCATAGTCCAGATGCGAACGGGGACATGAAGCA--------ACCA------GAGGGTCCCGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 42002 1299 + 75148670 AGCGGCTCCC-AGCATGAAGGCCGAGG-------------------------TGATGG--TGGGGG---GCAGAGGTTGGGGG--CAATCCCCGGACGGCAAGATGCACATTCACAGATGGCCTCAGAAGCCCAGAGCCTGCTCCCAGGCTGCAGGGCTGGTCAACTGGTGTC------------------------Acattcattcattatttaccaagtgt--ttacaatacgccagactccagggg-atggacatctgtgaggcagagtccccaccccaaggaaagcacagcttaaggggaggaacaaaaggaaagaatttgccgcagtagactctggtgagccaggagccacggggagccca-------------------tgtgaattgggaccatcagggaaggcttcctggaggaggtgatgtttcact-gagccatgagggaaaagtaggagttggccaatggcacagtggggctgggggaggtgatgattccaaccacaggccaaccagcaggtgcgggcttaatgactggtgtgaccctggGATAAGGGAAGGCCAAACTTGAAAGATTCTATTC---TTGAGG------CTCTGAGCTATGCTCCCAACATGGATCTAGATCCAATTA--------TGGCCACACCTGACTGGGCCCAT-CATTTACATCTCGTCTGCGGC-GCTTTCCTGCTTCAGAAGCagaccatatggcctgcacagctgaaaatatttactgtccagcc---ctttatagaacaagtttgcagatctctgG-----GTGAGTGCTGGGCCCGGCCAGGCATAATACAGTTTCTTGGGTCTGCAGGGAAATTGGCTGATGAAAGGCCATTGGTGTGGAGTGTCCTTTATTCTAAGCTGGTGACGGGA-GTGGCATTTGTGCAGATCACCCCCTTCTAACACGGATCA-----GGCACGTGTCTC--TCTT----Tg--------ca--gcagt-------gtggggtgcaagacctgc----cctctgacatcagtctcc-tgggttcaaatcccagcat-gcacttccctgctgtgtgac------cagcttatctaacgtctttatgcctcagttt-gctcatctgtaaaatggagacaacagtggtatccacctcacagCAC---------ACAGTGTGCCTGGGGTGTAGGAGGGGATCAGTAGATCACTACAGAAGAAGCAGATCC-CTATGGTGGGTTTTGTAGCTAACAGTACTGGCTTCTATGAGACccattctggaatgaaactgtcctcgactggatcatttccctccctgcctttgggaacagaacatacaaatggtcacttaagcttttctgaataacctgagtcgctgctatgGCTACGATTACTCTTTCAAACGTCACAGTCATAGTCCAGATGCGAACGGGGACATGAAGCA--------ACCA------GAGGGTCCCGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 855574 1298 - 1291538 AGCAGCTCCC-AGCAGGAGGGCCAAGG----------------------------------GGAGG---GCAGAGCTTGGC----CAGTCCCCAGGCAGCAAGATGCACATTCGCAGATGGCTTCGGAAGCCCAGAGTCTGCTCCCAGGCTGCAGCGCTGGTCCACGGGTGTt------------------------tcattcattcattatttaccaagtgt--ttacagtgtgccagactctagcgc-acggacatctgaaaggcagggtccctaccccgaggaaaacagagcttaatgggaggaacaaatggaaagaatttactccagtagaacctggtgagccaggagccttgggaagccca-------------------tgtgaattggaaccagcaaggaaggcttcctggaggaggtgatgcttcacctgagccacaaggaatgagtaggagttggccaatggcacagtagggctgggggaggtgac-attccagccacaggccaaccagcaggtgtgggcttagtgactggtgtgatcctggGATAAGGGAAGGCCAAACTTGAAAGACTTTATTC---TTCAGGCTAGGACTCTGAGCTAGGCTCCCAGCATGGGTCTACATACAATTATGGCCCGCTGGCCAaacctgaccaggcccatccatttatgcctcatctgtggctgctttcccgcttcagagg--gaccatatggcctgcacagttg-aagtatttactatctggcc---tgttatagaacaagtttgcagatctctgG-----GCAAGTGCTGGGGC---CCAGACGTA--ACAGTTTCCTGGGTCTGCAGGGAAATGGGCTGGTGAGGGGCCAC--ATGTCG-------TTTATTCTGAGCTGGTGATGGGA-GTGG-ATTTCTCTACATCACCCGGTCCTCACACGGGATG----GGGCAGATGTCTCTGTCTTTGGCTg--------cagcgcagt-------gtggggtgcaagacctgc----tccctggtatcagtctcc-tgggttcagagcccagcat-gtacttccctgccatgtgac------cagcttatccagcatctctgtgcctccgtttgactcatctgtaaaatggagacaa---tagtatccacctcacagCAC---------Tca--gtccctggggtgtaagaggcgctcagtagatctttctggaaggagcagatTC-CTCTGGTGGCTTTTCTAGCTAACAGTACTGGCTTCTGTGAGACCCATTCT-GAATGAAACTGCTCTCAACTGGAGCATTTCCCTTCCTACCTTTGGGAACAGAATATACACATGGTCACTTAAGCTTTTCTGAATAACCTACATCATTTCTTTGGCTGCAATTACTTTTCCGCATGACACAGTCATAGTCCAGAGGCGGATGGGGA-ATGAGGCAGCCCCTCCACT-------GGGGGTCCCGGG i calJac3.chrUn_GL286409 C 0 I 204 s mm10.chr11 75788583 857 + 122082543 GAGGGTTCCTAAGGAAAAGAGCCAGGG-------------------------TGTGAG--CAAGGA-----AGACCTCTGA-----AGTCCCCAGACAGCAAGGGACACATTCTTTAATATCTTTAACATT--------------------------CTGATCA---GGTCTC------------------------ACATT-------------------------------TGCCTG---------------------GTGAGCCAAGAGCC--------AGGAGAGC----TTCAAGAGG------------------------------------------------GTCTCTGGGCCTCAG-------------------TGTGAATTGAG-CTATCAGGGGAGGCTTCTTGGAG-----------------GAATC------GACAGATAGTAGTTGGCCAATGGTAT-GAGGGTCTCAGAGGGGACATCAT---AACCACAGGC--GTCTGT-GATGGGGGAACGATGGCTGAAGGGGTGCTGGGATGGGTGACGGGCTGGGCTG--AGCCTCTGTCCCCATCAAGG------TTCTGTGCTGGACTCC-------------------------------AAGCTGTGCCTG-------CCTT-TACTAA----------------------------CAAAGGCAG-------------------------------------GGCC------------GCATCCTAACAGTCTTC---------TGTGTACAG--------CAAACGCTGTGC----TCTTTGTTC------------------TGAGAGAC-----ATGTGG---------------AAACGGGT--------------------TGGGTTCCCCCATCCCAACAGGGGGGT------GTTTTTGTCTCTTTCTG----GG--------GG--GCAGT-------TGTGAGTGTGGAGAATAA----CATTTGTTGTTGCactccacaggttcaaatcccagctcagcatgttcttgttgcatgac------------------------ttcacctcagttt-ccccatctgt-aaccggagataactataa---ctacctcccagcac---------atggggttCCTCAGGGACATGG------------------------------------------------TTCTTGTGCGCTGAGTTTGCCCTTCTAAGGAC--TTCCTGGAAGGGACTGCCTTAAGCTTGATCA-CCCTCTCCCTGCCTTTGCAAACTTGACAC--------------------------ATAAGCAGAGTCATAGCTATGACTACCACGATTCTTCGGTGGGTCACAGTCACAG-CCAGAC---AGAAGAGATGTGAGGTGATTGCTCCACTG------GGGGTTCC---- i mm10.chr11 C 0 C 0 s canFam3.chr9 15616190 1309 - 61074082 CGTGGCTCAT-GGCGTGAAGGTGGGGG-------------------------TTGTGGGTTGGGGGACAGCAGACCTCAGGGGGCAAATCTCTAGACAGCAAGATGCACATTGACAGATGTCTTTAGAAACCCCGATCCTGCACACAGACTGCTGGGCTGGTCAACTGGCAACCTGttcgttcgttcattcattcattcattcattcatccattcCCAAGCTTTATTACAATAAgctggcctctagggatgaaaatatcaataaggcggggttcctgccccaaggaaagcataacttaatgggagacactgatgaaaagaatctgccctagcagagtctggtgagccaggagcaataggagttcaaggggtatgccttgcctggctgtgaatgggggccaccagggaaggatccctagaggaggtgacgcttcaccagagccacgaaagatgagtaggagttggccagt-gcacagtggtgcggggagaaagggc-attccaatcgcaggccaactggaggtgagaggctgagccgctgaggtga-----ggctgAGGGAAGGGCGAG-------------GCTC---TCCAGG------CC---AGC--AGCACCTAACGCGGTTCTAGATTC-------------ATGCTGAGCCTGGATATGCTCAT-CTCATGTATCT--------GCTGCTTTTGCACTACAATGC----------------CACAGCTG--AGTAGATGCCATACGCCT-----------------------GACCTCGGGGCGTCGTGGGGGTGGGGGTGCGGACAGTATGGCAAAAT---TTGGCTTTGCAGAGAAACAGGCAAATTAAGGCCC----ATGTGGAGCCTCCCTTATTCTGAGGTCATGGTACTAGGTTGCATTTGTCTTGCTCTCTAGCTTCTAAGACAGGGTAAGGAAGGCACTCGGCTCAGTCTC----TGCCCTTGCCCA--GGAGGGGCACAAGTGGGGTACAAGATCCGCCGCACctctgacacctgac-cc-tgggttcaagtcctggctctatgcttccttgctgtttgactttagctagcttttctagcctccttgt-tctcagttt-cctcatctgcaaaatggagac-gcaatagtatccagttcacagcactgtGCTTTGACA--GCCCCTGGGGTACAGAAAATGCTCAGTACGTAATTATAAAAGGAGCAGATCCACTTAGGTTATTTTTCTGGATAAATGTACTTGCCCCTCTGAGACGCCTGCTGGAATGAACTCGTTCCAAACTGGATCACTCCCCTCCCAGCCTTTGTGAAGACAGTACACAAGTGGTCACTTACACTCTTCTGAATGACCTGAGTCATCGCTGTGACTACAACTCCCATTCCATGCGTTGTGGTTGCAGCCTGGATG----AAGTGATCCCCAGCA--------GCCACTCTTTGAGG-------- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=352559.000000 s hg38.chr17_GL383563v3_alt 113573 186 + 375691 TGGCCCTCTTTTCGGTTTTCTTCATTTTTCTGCCTCTTCCTTTGACATCAGCCTGAAACTCCTATTAGATTACTTGTCTGTGTTGGCGCAGACAG--CTCTCACCTATTC---AATAATTGTTTCTCCCATGAGACCAGGTGATGATACTTGTTGGAAGTGTGTGCAAACTAAGAGCCAACAGGCCTTGAG s panTro4.chr17 111572 186 + 82630442 TGGCCCTCTTTTCGGTTTTCTTCATTTTTCTGCCTCTTCCTTTGACATCAGCCTGAAACTCCTATTAGATTACTTGTCTGTGTTGGCGCAAACAG--CTCTCACCTATTC---AATAATTGTTTCTCCCATGAGACCAGGTGATGATACTTGTTGGAAGTGTGTGCAAACTAAGAGCCAACAGGCCTTGAG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 39899 183 + 80904711 TGGTCCTCTTTTCGGTTTT----ATTTTTCTGCCTCTTTCTTTGACATGAGCCTGAAACTCCTATTCGATTACTTGTCTATGGTAGTAGAAACAGCTCTCTCACCTGTTC---AGTCATTGTTTCTCCCAAGAAACCAGGTGATGATACTTGTTAGAACTATGTGCAAACTAAGAGCCAACAGATCGTG-G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 39632 183 + 80997621 TGGTCCTCTTTTCGGTTTT----ATTTTTCTGCCTCTTTCTTTGACATGAGCCTGAAACTCCTATTCGATTACTTGTCTATGGTAGTAGAAACAGCTCTCTCACCTGTTC---AGTCATTGTTTCTCCCAAGAAACCAGGTGATGATACTTGTTAGAACTATGTGCAAACTAAGAGCCAACAGATCTTG-G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50636 183 + 74645514 TGGTCCTCTTTtcggtttt----atttttctgcctctttctttgaCATGAGCCTGAAACTCCTATTCGATTACTTGTCTATGGTAGTACAAACAGCTCTCTCACCTGTTC---AGTAATTGTTTCTCCCAAGAAACCAGGTGATGATACTTGTTGGAACTATGTGCAAACTAAGAGCCAACAGATCTTG-G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43301 183 + 75148670 TGGTCCTCTTTTCGGTTTT----ATTTTTCTGCCTCTTTCTTTGACATGAGCCTGAAACTCCTATTCGATTACTTGTCTATGGTAGTACAAACAGCTCTCTCACCTGTTC---AGTAATTGTTTCTCCCAAGAAACCAGGTGATGATATTTGTTAGAACTATGTGCAAACTAAGAGCCAACAGATCTTG-G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 857076 188 - 1291538 GGGGCCTCTTTTTGGTTTTCTTCATTTTTCTGCCTCCTCCTTTGATACCAGCCTGAAAGTCCTATTAGATTACTTGCCTCTGGTAGCACAAACAGCTCTCTCACCTATTC---AATAATTCTTTCTCCCATgaaaccaggtgatgatacttgttagaactgtgtgcaaactaagagccaacaggtcttgag i calJac3.chrUn_GL286409 I 204 C 0 s mm10.chr11 75789440 84 + 122082543 ------------------------------------------------------------------------------TCTGGAAGCACAAACAG-----------------------CTATTTCTTGCAT-AAACCAGG---TAATACTTGTTAGATCTGTGTTCAGACTA--AGTCGACAGATGTGTAG i mm10.chr11 C 0 I 1 s canFam3.chr9 15617499 186 - 61074082 -----TTTTCCTAGGTTTTCTTCATTTTTCTGCCTCCCCCTTTGCCAACAGCCTGAAACTCCTCTTAGAATACTTGCCTCTGATAGCACAAACGGCCCTCCTTCCTTTTCCATAGCACTTGTTCCTCCTACCaaaccaggtgcgaacacctgctagaattgtgtccaaactatgagtcagtaggccttgag i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=4389.000000 s hg38.chr17_GL383563v3_alt 113759 3 + 375691 TGG s panTro4.chr17 111758 3 + 82630442 TGG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 40082 3 + 80904711 TGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 39815 3 + 80997621 TGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50819 3 + 74645514 TGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43484 3 + 75148670 TGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75789525 3 + 122082543 GAG i mm10.chr11 I 1 C 0 s canFam3.chr9 15617685 3 - 61074082 cag i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 857264 0 - 1291538 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=6111.000000 s hg38.chr17_GL383563v3_alt 113762 3 + 375691 CTg s panTro4.chr17 111761 3 + 82630442 CTg i panTro4.chr17 C 0 C 0 s rheMac3.chr16 40085 3 + 80904711 CTg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 39818 3 + 80997621 CTg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50822 3 + 74645514 CTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43487 3 + 75148670 CTg i chlSab2.chr16 C 0 C 0 s mm10.chr11 75789528 3 + 122082543 CTG i mm10.chr11 C 0 I 350 e canFam3.chr9 15617688 0 - 61074082 C e calJac3.chrUn_GL286409 857264 0 - 1291538 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=38338.000000 s hg38.chr17_GL383563v3_alt 113765 30 + 375691 gtgtggggctcatgcctgtcatcccagcag s panTro4.chr17 111764 30 + 82630442 gtgtggtgctcatgcctgtcatcccagcag i panTro4.chr17 C 0 C 0 s rheMac3.chr16 40088 30 + 80904711 gcgcggtgctcacgtctgtcatcccagcag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 39821 30 + 80997621 gcgcggtgctcacgtctgtcatcccagcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50825 30 + 74645514 GCGCGgtgctcacgtctgtcatcccagcag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43490 30 + 75148670 gtgcggtgctcacgtctgtcatcccagcag i chlSab2.chr16 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e calJac3.chrUn_GL286409 857264 0 - 1291538 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=7777.000000 s hg38.chr17_GL383563v3_alt 113795 15 + 375691 tttgggaggccgaag s panTro4.chr17 111794 15 + 82630442 tttgggaggccgaag i panTro4.chr17 C 0 C 0 s rheMac3.chr16 40118 15 + 80904711 tttgggaggctgagg i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 43520 15 + 75148670 tttgggaggctgaag i chlSab2.chr16 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e calJac3.chrUn_GL286409 857264 0 - 1291538 C e papAnu2.chr16 50855 0 + 74645514 C e macFas5.chr16 39851 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=15286.000000 s hg38.chr17_GL383563v3_alt 113810 68 + 375691 cagatggatcacttgagctcaggagttcgagaccagcctggccaacatggca------------acaaaaactacaaaaa s panTro4.chr17 111809 68 + 82630442 cagatggatcacttgagctcaggagttcgagaccagcctggccaacatggca------------acaaaaactacaaaaa i panTro4.chr17 C 0 C 0 s rheMac3.chr16 40133 80 + 80904711 cgggtggatcacttgaggccaggagtttaagaccggcctggccaacatggcaacacccacctctacaaaaaatacagaaa i rheMac3.chr16 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e calJac3.chrUn_GL286409 857264 0 - 1291538 C e chlSab2.chr16 43535 0 + 75148670 C e papAnu2.chr16 50855 0 + 74645514 C e macFas5.chr16 39851 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=2760.000000 s hg38.chr17_GL383563v3_alt 113878 6 + 375691 tggccg s panTro4.chr17 111877 6 + 82630442 tggccg i panTro4.chr17 C 0 C 0 s rheMac3.chr16 40213 6 + 80904711 tagcca i rheMac3.chr16 C 0 I 11 s calJac3.chrUn_GL286409 857264 6 - 1291538 tggccg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e chlSab2.chr16 43535 0 + 75148670 C e papAnu2.chr16 50855 0 + 74645514 C e macFas5.chr16 39851 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=27516.000000 s hg38.chr17_GL383563v3_alt 113884 32 + 375691 ggtgtggtggctcacgcctataatcccagcac s panTro4.chr17 111883 32 + 82630442 ggtgtggtggctcacgcctataatcccagcac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 10000 32 + 73212453 ggtgtggtggctcacgcctataatcccagcac i ponAbe2.chr17 N 0 C 0 s rheMac3.chr16 40230 32 + 80904711 ggcgcggtggctcacgcctgtaatcccagcac i rheMac3.chr16 I 11 C 0 s calJac3.chrUn_GL286409 857270 32 - 1291538 ggcgtggtggctcacacctgtaatcccagaac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e chlSab2.chr16 43535 0 + 75148670 C e papAnu2.chr16 50855 0 + 74645514 C e macFas5.chr16 39851 0 + 80997621 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=28062.000000 s hg38.chr17_GL383563v3_alt 113916 15 + 375691 tttgggaggctgaga s panTro4.chr17 111915 15 + 82630442 tttgggaggctgagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 10032 15 + 73212453 tttgggaggctgagg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 40262 15 + 80904711 tttgggaggccgagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 39851 15 + 80997621 tttgggaggctgagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50855 15 + 74645514 tttgggaggctgagg i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 857302 15 - 1291538 tttgggaggctaagg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e chlSab2.chr16 43535 0 + 75148670 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=25957.000000 s hg38.chr17_GL383563v3_alt 113931 12 + 375691 cgggtggatcac s panTro4.chr17 111930 12 + 82630442 cgggtggatcac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 10047 12 + 73212453 cgggtggatcac i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 40277 12 + 80904711 cgggcggatcac i rheMac3.chr16 C 0 I 30 s macFas5.chr16 39866 12 + 80997621 cgggtggatcac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50870 12 + 74645514 cgggtggatcac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43535 12 + 75148670 tgggtcgatcac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 857317 12 - 1291538 tgggtggactgc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=70916.000000 s hg38.chr17_GL383563v3_alt 113943 43 + 375691 ttgagcccaggatttcaagaccggcctggcc-aacatggaaaca s panTro4.chr17 111942 43 + 82630442 ttgagcccaggatttcaagaccggcctggcc-aacatggaaaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 10059 43 + 73212453 ttgagcccaggagttcaagaccagcctggcc-aacatggcaaca i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 39878 43 + 80997621 ttgaggccaggagtttaagaccggcctggcc-aacatggcaaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50882 43 + 74645514 ttgaggccaggagtttaagaccggcctggcc-aacatggcaaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43547 43 + 75148670 ttgaggccaggagtttaagaccggcctggcc-aacatggcaaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 857329 44 - 1291538 ttgagctcaggagttcaacagcagcctggccaaacatggcaaca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e rheMac3.chr16 40289 30 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=443531.000000 s hg38.chr17_GL383563v3_alt 113986 203 + 375691 cccatttctacaaaaaatacaaaaa--tagccgggcatggtggcgcatgcctgtggtcccagctactcgggaggctgaggtgggaggaccgcttgagcccaggaagttgaggctacagtgagtgtgattgtgccactgca-tccaacctaggcgacagagcgagatcctgtctcaaaaaaataaa--taaaTACTAGGTCTTGAGTGA s panTro4.chr17 111985 203 + 82630442 cccatttctacaaaaaatacaaaaa--tagccgggcatggtggcgcatgcctgtggtcccagctactcgggaggctgaggtgggaggaccacttgagcccaggaagttgaggctacagtgagtgtgattgtgccactgca-tccaacctgggcgacagagcgagatcctgtctcaaaaaaataaa--taaaTACTAGGTCTTGAGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 10102 203 + 73212453 cccatctctacaaaaaatacaaaaa--cagccgggcatggtggcgcatgcctgtggtcccagctactcaggaagctgaggtgggaggaccgcttgagcccaggaggttgaggctacagtgagtgtgattgtgccactgca-tccaacctgggcgacggagtgagatcctgtcccaaaaaaataaa--taaaTACTAGGTCTTGAGTGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 40319 205 + 80904711 cccgtctctactaaaaatacaaaaaattagccgggcgcggtggcgggcgcctgtagtcccagctactcaggaggcggaggcgggaggaccccttgagcccaggaggttgaggcaacagtgagtgtggctgtgccgctgca-tccgacctgggtgacagagcgagatcctgtctcagaaaaatcaa--taaaCACTAGGTCTTGAGTGA i rheMac3.chr16 I 30 C 0 s macFas5.chr16 39921 203 + 80997621 cccacctctacaaaaaatacagaaa--tagccaggcatggtggcgcatgcctgtggtcccagctactcaggaggcggaggtgggaggaccccttgagcccaggaggttgaggcaacagtgagtgtggctgtgccgctgca-tccgacctgggtgacacagcgagatcctgtctcagaaaaatcaa--taaaCACTAGGTCTTGAGTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 50925 203 + 74645514 cccacttctacaaaaaatacaaaaa--tagccaggcatggtggcgcatgcctgtggtcccagctactcagggggcggaggtgggaggaccccttgagcccaggaggttgaggcaacaGTGAGTGTGGCTGTGCCACTGCA-TCCgacccgggtgacagagcgagatcctgtctcaaaaacgtCAA--TAAACACTAGGTCTTGAGTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43590 203 + 75148670 cccacctgtacaaaaaacacaaaaa--tagccaggcatggtggcgcacgcctgtggtcccagctactcaggaggtggaggtgggaggaccccttgagcccaggaggttgaggcaacagtgagtgtggctgtgccactgca-tccggcctgggtgacagagcgagacgctgtctcaaaaaTGTCAA--TAAACACCAGGTCTTGAGTGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 857373 206 - 1291538 ccaatgtctacaaaaaatacaaaaa--taactgggtgtggtgatgcgtacctgtggtcccagctactcaggaggctgaggtgggaggaccactctagcccaggaagttgaggttacagtgagcgtgatttttctactgcactccaacctgggcagcagagcaagatcctgtctcaaaaaaaaaaaagaaaaTACTAGGTCTTGAGTGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e canFam3.chr9 15617688 0 - 61074082 C e nomLeu3.chr19 81496740 0 + 81552678 I a score=174496.000000 s hg38.chr17_GL383563v3_alt 114189 98 + 375691 AGCCTGAGGCACGTTCTCCTGAGCAGGGTATGTGTGCAGCAGCAATAGCTGTAGCTGGCCTTCAGCTGCCTGCATGCTAGCTGCCATCTCCACACCAG s panTro4.chr17 112188 98 + 82630442 AGCCTGAGGCACGTTCTCCTGAGCAGGGTATGTGTGCAGCAGCAATAGCTGTAGCTGGCCTTCAGCTGCCTGCATGCTAGCTGCCATCTCCACACCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 10305 98 + 73212453 AGCCTGGGGCATGTTCTCCTGAGCAGGGTATGTGTGCCTCAGCAATAGCTGTAGCTGGCCTTCAGCTGCCTGCATGCTAGTTGCCATCTCCACACCAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 40524 82 + 80904711 AGCCTGGGGCACGTTCTCCTGAGAAGGGTATGTGTGCCTC--CAGTAGCTGTAGCTG--------------GCATGCTAGCTGCCATCTACACACCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 40124 82 + 80997621 AGCCTGGGGCACGTTCTCCTGAGAAGGGTATGTGTGCCTC--CAGTAGCTGTAGCTG--------------GCATGCTAGCTGCCATCTACACACCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 51128 84 + 74645514 AGCCTGGGCCACATTCTCCTGAGAAGGGTATGTGTGCCTCAGCAATAGCTGCAGCTG--------------GCATGCTAGCTGCCATCTACACACCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 43793 83 + 75148670 AGCCTGGGGCACGTTCTCCTGAGAAGGGTACGTGTGCCTCAGCGATAGCTGCAGCTG--------------GTACGCTAG-TGCCATCTACACACCAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 857579 98 - 1291538 AGCCTGGGCCACGTTCTCCCGAGCAGGGTATTTGTGCCTCAACAATAGCCATAGCTGGCCTTCGGCTGCCTGTGTGCTGGCTGCCACCCACAGGGCAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15617688 80 - 61074082 agcctatcgtgc-ttttcctaagtagagtTAGGGTGCTTTGGCGCTCGCTGTATCTG----------GCCGGTTTCCGGACTCCCATCTAT------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75789531 350 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=2057593.000000 s hg38.chr17_GL383563v3_alt 114287 847 + 375691 GCAGGTGAGGCTGCTGGAAGGGAGGTGTATCCCACTGCTCCTGCAGCAATGAACACAGCCACAG-CCCGAGATGCACCA-ATCTGTACTTTTGTAACAATATTCTCTGAAGCTGTTGGCTTTACATGATAGTAAATGGATCTGCTGTTCAGGTCAGGCCTACCTGGGgtttgttcccccaacgaattagccccctgagcacagggaccatgccttg-gccacac------ctgtgagaccaacaaacagcagatg--cagacacacaTGGCTGGTCCATTCAAACCAACTTGCCCTCCAGGTGC-TCCCAGGAGCTGGGATCTGGTGTGACACCCAAGTGTAAAAATGCACATTC--TG--ATTTCTGCCTGTTTCCCAACCCCAGAGAAGGACAGCCAGA-AGACAGAGCGGCTGCCTGC----TCC-CCCTGGGACACCCAGCTCCTGGAG------------GGGAGAAGCCCCTGCACTGGCTCTACAGAAACCCCTGTCCAAGGAGGGCAGCGATCTTCTCCAACTGCCTGGGGGGAAAACTGACACCCGTCACCACCTCCTGGGAAGGAACAGCACACCCAGTGTGTCACCAGGAAGGGACTGATGAATTTCTTTGAACTCCACTGGAAGGTCTGTAAGAAATG------------------------------ATAGTTTATAAATAGAAGCTCGGTCACAGTTTtcagagg-c--------tggtgaagctctcttacggagcacatggcccaaa-ctcttcatttccc-tttagagaaatgaggctcagagaggggaggggagctgctcagcgtggcccagcagacccaggcacagaatctaggc--ctcttcacttccatcctgatagtttctcccttaaagcctactggctcccAAGAAG------ttttttttttttg s panTro4.chr17 112286 853 + 82630442 GCAGGTGAGGCTGCTGGAAGGGAGGTATATCCCACTGCTCCTGCAGCAATGAACACAGCCACAG-CCCAAGATGCACCA-ATCTGTACTTTTGTAACAATATTCTCTGAAGCTGTTGGCTTTACATGATAGTAAATGGATCTGCTGTTCAGGTCAGGCCTACCTGGGgtttgttcccccaacgaattagccccctgagcacagggaccatgccttg-gccacac------ctgtgagaccaacaaacagcagatg--cagacacacaTGGCTGGTCCATTCAAACCAACTTGCCCTCCAGGTGC-TCCCAGGAGCTGGGATCTGGTATGACACCCAAGTGTAAAAATGCACATTC--TG--ATTTCTGCCTGTTTCCCAACCCCAGAGAAGGACAGCCAGA-AGACAGAGCGGCTGCCTGC----TCC-CCCTGGGACACCCAGCTCCTGGAG------------GGGAGAAGCCCCTGCACTGGCTCTACAGAAACCCCTGTCCAAGGAGGGCAGCGATCTTCTCCAACTGCCTGGGGGGATAACTGACACCTGTCACCACCTCCTGGGAAGGAACAGCACACCCAGTGTGTCACCAGGAAGGGACTGATGAATTTCTTTGAACTCCACTGGAAGGTCTGTAAGAAATG------------------------------ATAGTTTATAAATAGAAGCTCGGTCACAATTTTGAGAGG-C--------TGGTGAAGCTCTcttacggagcacatggcccaaa-ctcttcatttccc-tttagagaaatgaggctcagagaggggaggtgacctgctcagcgtggcccagcagacccaggcacagaatctaggc--ctcttcacttccatcctgatagtttctcccttaaagcctactggctcCCAAGAAGttttttttttttttttttg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 10403 853 + 73212453 GCAGGTGAGGCTGCTGGAAGGGAGGTATATCCCACTGCTCCTGCAGCAATGAACACAGCCACAC-CCCAAGATGCACCA-ATCTGTGCTTTTGTAACAATATTCTCCAAAGCCATTGGCTTTACGTGATAGCAAATGGATCTGCTGTTCAGGTCAGGCCTACCTGGGGTTTGTTCCCCCAACGAATTAGCCTCCTGAGCACAGGGACCATGCCTTG-GCCACAC------CTGTGAGACCAACAAACAGCAGATG--CAGACACACATGGCTGGTCCATTCAAACCAACTTGCCCTCCAGGTGC-TCCCAGGAGCTGGGATCTGGTGTGACATCCACGTGTAAAAATGCACACTC--TG--ATTTCTGCCCGTTTACCAACCCCAGAGAAGGACAGCCAGA-AGACAGAGCGGCTGCCTGC----TCC-CCGTGGGACACCCAGCTCCTGGAG------------GGGAGGAGCTCCTGCACTGGCTCTACAGAAACCCCTGTCCAAGGAGGGCAGCGATCTGCTCCAACTGCCTGGGGGGAAAACTGACACCTGTCACCACCTCCTGGGAAGGAACAGCACGCCCAGTGTGTCACCAGGAAGGGACTGATGAATTTCTTTGAACTCCACTGGAAGGTCTGTAAGAAATG------------------------------ATAGTTTATAAATAGAAGCTCGGTCACAATTTTGAGAGG-C--------TGGTGAAGCTCTcttatggagcacatggcccaaa-ctcttcatttccc-tttagagaaatgaggctcagagagggaaggtgagctgctcagtgtggcccagcagacccaggtacagaatctaggc--ctcttcacttccatcctgatagtttctcccttaaagcctagtggctcCCAAGAAGtttttttttttttttttgg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 40606 833 + 80904711 GCAGGTGAGGCTGCTGGAAGGTAGGTATATCCCACCGCTCCTGCAGCAATGCACACAGCCACAG-CCCAAGACACACCA-ATCTGTGCTTTTGTAACAATATTCTCCAAAGCCGTTGGCTTTACGTGACAGTCATTCGA--TGCCGTTCAGGTCAGGCCTACCTGGGGTGTGTTCCCCCAATGATTCAGCCTCCTGAGCAACGGGACCATGCCTTG-GCCACAC------CTCTGAGACCAACAAA---CAGATG--CAGACACATGTGGCTGGGCCATTCAAGCCCACCTGCCCTCCAGGTGC-TCCCAGGAGCTCGGAGCCGGTGTGACCCTCACGTGTGAAAATGCACAGTC--TG--ATTTCTGCCTGTTTCCCAACCCCAGAGAAGGACAGCCAGA-AGACGGAGTGGCTGTCTGC----TCC-CCCTGGGACACCCAGGTCCTGGAG------------GGGAGGAGCCCCTGCGCTGGCTCTGCACAAACCCCTGTCCACGGAGGGCAGTGACCTGCTCCCTCTGCTCGGGGG--AAACTGACACCTGCCACCACCTCCTGGGAAGGGACAGCGCATCCAGAGTGTCACCGGGAAGGCACTGACGAATTTCTCTGAACTCCACTGGAAG----GTAAGAAATG------------------------------ATAGTTTATAAATAGAAGCTCGGTCACAATTTTGAGAGG-C--------TGGTGCAGCTCTcttagggagcacatggcccaa----cttcatttccc-ttcagagaaatgaggctcagagagggcaggtgagctgctcagcacggcccagcagaccaggccacagaatctaggc--ctcttcacttccatcctgatagtttctcCCTGGAGGCCTAGTGGCTCCCAAGAAG------TTGttgttttttg i rheMac3.chr16 C 0 I 524 s macFas5.chr16 40206 833 + 80997621 GCAGGTGAGGCTGCTGGAAGGTAGGTATATCCCACCGCTCCTGCAGCAATGCACACAGCCACAG-CCCAAGACACACCA-ATCTGTGCTTTTGTAACAATATTCTCCAAAGCCGTTGGCTTTACGTGACAGTCATTCGA--TGCCGTTCAGGTCAGGCCTACCTGGGGTGTGTTCCCCCAATGATTCAGCCTCCTGAGCAACGGGACCATGCCTTG-GCCACAC------CTCTGAGACCAACAAA---CAGATG--CAGACACATGTGGCTGGGCCATTCAAGCCCACCTGCCCTCCAGGTGC-TCCCAGGAGCTCGGAGCCGGTGTGACCCTCACGTGTGAAAATGCACAGTC--TG--ATTTCTGCCTGTTTCCCAACCCCAGAGAAGGACAGCCAGA-AGACGGAGTGGCTGTCTGC----TCC-CCCTGGGACACCCAGGTCCTGGAG------------GGGAGGAGCCCCTGCGCTGGCTCTGCACAAACCCCTGTCCACGGAGGGCAGTGACCTGCTCCCTCTGCTCGGGGG--AAACTGACACCTGCCACCACCTCCTGGGAAGGGACAGCACGTCCAGAGTGTCACCGGGAAGGCACTGACGAATTTCTCTGAACTCCACTGGAAG----GTAAGAAATG------------------------------ATAGTTTATAAATAGAAGCTCGGTCACAATTTTGAGAGG-C--------TGGTGCAGCTCTcttagggagcacatggcccaa----cttcatttccc-ttcagagaaatgaggctcagagagggcaggtgagctgctcagcacggcccagcagaccaggccacagaatctaggc--ctcttcacttccatcctgatagtttctcCCTGGAGGCCTAGTGGCTCCCAAGAAG------TTGttgttttttg i macFas5.chr16 C 0 I 22 s papAnu2.chr16 51212 832 + 74645514 GCAGGTGAGGCTGCTGGAAGGTAGGTATATCCCACCGCTCCTGCAGCAATGCACACAGCCACAG-CCCAAGACACACCA-ATCTGTGCTTTTGTAACAATATTCTCCAAAGCCGTTGGCTTTACGTGACAGTCATTCGA--TGCCGTTCAGGTCAGGCCTACCTGGGGTGCGTTGCCCCAAtgattcagcctcccgagcaacggGACCATGCCTTG-GCCACAC------CTCTGAGACCAACAAA---CAGATG--CAGACACACGTGGCTGGGCCATTCAAGCCCACCTGCCCTCCAGGTGC-TCCCAGGAGCTCGGAGCCGGTGTGACCCTCACGTGTGAAAATGCACAGTC--TG--ATTTCTGCCTGTTGCCCAACCCCAGAGAAGGACAGCCAGA-AGACGGAGTGGCTGTCTGC----TCC-CCC-GGGACACCCAGCTCCTGGAG------------GGGAGGAGCCCCTGCACTGGCTCTGCAGAAACCCCTGCATACGGAGGGCAGCGACCTGCTCCCTCTGCTCGGGGG--AAActgacacctgccaccacatcctggGAAGGGACAGCGCGCCCAGTGTGTCACCAGGAAGGCACTGACGAATTTCTCTGAACTCCACTGGAAG----GTAAGAAATG------------------------------ATAGTTTATAAATAGAAGCTCGGTCACAATTTTGAGAGG-C--------TGGTGAAGCTCTCTTAGGGAGCACATGGCCCAA----CTTCATTTCCC-TTCAgagaaatgaggctcagagagggcaggTGAGCTGCTCAGCGCGGCCCAGCAGACCAGGCCACAGAATCTAGGC--CTCTTCACTTCCATCCTGATAGTTTCTCCCTGGAAGCCTAGTGGCTCCCAAgaag------ttgttgttttttg i papAnu2.chr16 C 0 I 21 s chlSab2.chr16 43876 831 + 75148670 GCAGGTGAGGCTGCTGGAAGGTAGGTATATCCCACCGCTCCTGCAGCAATGCACACAGCCACAG-CCCAAGACACACCC-ATCTGTGCTTTTGTAACAATATTCTCCAAAGCCGTTGGCTTTACGTGACAGTCATTCGA--TGCCGTTCCGGTCAGGCCTACCTGGGGTGTGCTCCCCCGATGATTCAGCCTCCTGAGCAACGGGACCATGCCTTG-GCCACAC------CTCTGAGACCAACAAA---CAGATG--CAGACACACGTGGCTGGGCCATTCAAGCCCACCTGCCCTCCAGGTGC-TCCCAGGAGCTCGGAGCCGGTGTGACCCTCACGTGTGAAAAAGCACAGTC--TG--ATTCCTGCTTGTTTCCCAACGCCAGAGAAGGACAGCC-GA-AGACGGAGTGGCTGTCTGC----TCC-CCC-GGGACGCCCAGCTCCTGGAG------------GGGAGGAGCCCCTGCACTGGCTCTGCAGAAACCCCTGTCCACGGAGGGCAGCGACCTGCTCCCTCTGCTCGGGGG--AAACTGACACCTGCCACCACCTCCTGGGAAGGGACAGCGCGCCCAGTGTGTCACCGGGAAGGCACTGCCGAATCTCTCTGAACTCCACTGGAAG----GTAAGAAATG------------------------------AGAGTTTATAAATAGAAGCTCGGTCACAATTTTGAGAGG-C--------TGGTGAAGCTCTcttagggagcacatggcccaa----cttcatttccc-ttcggagaaatgaggctcagagagggcaggtgagctgctcagcgcggcccagcagaccagggcacagaaactaggc--ctcttcacttccatcctgctagtttttccctggaagcctagtggctcccAAGAAG------TTGTTGttgtttg i chlSab2.chr16 C 0 I 22 s calJac3.chrUn_GL286409 857677 779 - 1291538 GCAGGTGAGGCTGCTGGAAGGGAGGTATATCCCATTGCTCCGGCGGCAGTGAACACAGCCACAG-CCCAAGATACACCA-ATC-GTGC---TGCAACAATATTCTCCAGAGCTGTTGACTTGACATGAGAGTAAATCCATTTGCAGCTCAGGTTGGGCCTACCTGGGGTTTGTTTCCCCAACAAATTCACCTCCTGAGCTCAGGGACCTTGTCATG-GCCACAC------CTGTGAGACCGACAAAGAGCAGATG--CAGACACACGTGGCAGTTCCATTCAAACTCACTTGCCCTCTAGGGGC-TCCCAGGAGCTTGGATCTGGTGTGCCGCCCACGTAGAAAAATGCACACTC--TGTAATTTCCGCCTGTTTCCCAACCCCAGAGAAGGGCAGCCAGA-AGACAGAGTGGCTGCCTGCCCATCCT-CCCCAGGACACCCAGCTCCAGAAG------------GGGAG------------------------------TGTCTGAGGA------------------------CGGGGC--GATCGGACACCTGTTACCATCTCCTCGGAGGGAGCGGCCCGCCCAGTACATTACCGGGAAGGGACTGATGAATTTCTCTGAATTCCAGTGGAAGGTCTGTAAGAAATG------------------------------ATAGTTTATAAATAGAAGCTCGGTCACAATTTTGAGagatc--------tggcgaagctctcttagggagcacatgtcccaaa-ctcttcatttccc-ttcagagaaatgaggctcagagaggggaagtgagctgctgagcgcggcccagaagacctgggcacagaatctaggc--ctcttca-----accctg----------ccttaaagcctagtgGCTTCCAAAAAG------TTGGGtttttttg i calJac3.chrUn_GL286409 C 0 I 15 s mm10.chr11 75789881 737 + 122082543 GCAGGCGAGGATGCT-GAGGGTAAGGATACTGCAAAGCACC-------ATCACCTTATTAGCAG-C--------CACCC-AGCTGGGCTTCTGCAACATCATTCTGCAGAGGTGATGGCTTTGCATTATAATCAGTTTCCATGATGTCCAGCTAAGG-CTACCAG--------CTCCCTGAAGACCTCACCCTGTGAG-GGTTGGATGCTGCCTCA-GGTACCCGGAGGGTGGGGGGACCAGCAAGCAGCAGATGGTCAG-TGGTCATGGTGGAGCTGTTCGAATGGCATTGCAGTCCAGCTACTTCCCAGGAGGAGGGATTTGGTGTGAT-TCCACATATAACAGCACATACTCCATG--TTGTCTGCTTGTGTCCCAACCCCAGAGGACA--AGACAGG-GAACACGGGGGCTGCCTCT----T---------------------------------------------------------------------------------------------------------------GAA--ACACTAACATCTGTTACCATCACCTGGGAAGGAACAGTGTTCCCAGTGTGTGGCCAGAAAGGG-CTGACGGATGTCTAGTACCACCA----AAGACCTAGAAGGAATT------------------------------TTATCTTGTCACCAATAGCTTGGTCAGCATTTGGAGAGA-CTGCATGTGTGGAGGAGCTGTCTTAAGGGACATGTGACCCAAAGTTTGCCCTTTCCA-TTTGTAGAAATGAGGCTCAGAGAGGGGAGGTAGCCAAGTGAG-GTGGCCCTGAAGGGCTGGAGTTAAAGCCCTGTCTtttctttctttctttctttct--ttctttctttctttctttctttctttctttctttctttttttttttttttcg i mm10.chr11 I 350 C 0 s canFam3.chr9 15617768 848 - 61074082 GCAG--------GCTGGAAGTGAGGTATATAACACCATGCCTATAACGACAACCACAGCCATGGTCCCAAGATTCTCCAGGTCCACGCTTTTCTAA---TATTCTCCAAAGCTGTTGGCTTTATGTGATAGTAAATTAGTCTGCTGCTCAGTTCAGGCCTACCCATGGCTTGTTCTCTCAAGACATCAGCCTCCAGAGAGGAGCGACCATGCCTCGAGCCACAC------CAGCGACACTGGCAAA--GAAGACG-TTCGATCTGCACAGCCAGGCCATTCGACCCAATTTGCTCTCCAGCTGT-TCACAGGAGCAGGGATTTGG--TGATGCCCACGAGTTAAGATGCACACTC--CGC-AATCTTGCCCATTTCCCACTCTCAGAGGAGGCCAGCCAGACAGACATTGGGGCCACCTGC----TCCACACTGGGAATCTCAGGTCCCGGAGAAGAAAGGAGAAGAAAGGAGCCCCCTTGCTGGCTCTGCAGACATCTCTGTTTAAGGAGGGCTGACACTCA--------------GTG--AAAGCGACACGTATGATCAATTCCC----AGAAACAGCACACCC--TGGGTCCCCTCCATGCGATTGATGAATTCTTTTGACTGCCACTGGAGGTTTTGTAAGAAataatggtttataaatgtttataatagtttattatagtttataaATAGAAGTATGGTCACAATTTTTAGAGA-TTTGCTGA-TGGTGGAGCTCTcttagggatcttacagtccgaa-gtcttcatttcccattcagagaaatgaggctcagagagcgttggtgacctggtcagggtggcccagcagaactagacacagaatccagac--ctcttcatttccatcatgacagttcttttcttaaagcctactggcttgG------------------------- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=184291.000000 s hg38.chr17_GL383563v3_alt 115134 97 + 375691 agacagggtcttgttctgttacccaggct-----ggagtacagtggtgcgatcacagttcag--------cct-----cccaggctcaaacgatcctctcacctcagcctcccaa s panTro4.chr17 113139 97 + 82630442 agacagggtcttgttctgttacccaggct-----ggagtacagtggtgcgatcacagttcag--------cct-----cccaggctcaaatgatcctctcacctcagcctcccaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 11256 97 + 73212453 agacagggtcttgttctgttacccaggct-----ggagtacagtggtgcgatcacagttcag--------cct-----cccaggctcaaacgatcctctcacctcagcctcccaa i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 41061 97 + 80997621 agacaggctcttgttctgttgcccaggct-----ggagtgcagtggtgcaatcacagttcag--------cct-----cccaggctcaaacgatcctctcacctcagcctcccga i macFas5.chr16 I 22 C 0 s papAnu2.chr16 52065 97 + 74645514 agacaggctcttgttctgttgcccaggct-----ggagtgcagcggtgcaatcacagttcag--------cct-----cccaggctcaaacgatcctctcacctcagcctcccga i papAnu2.chr16 I 21 C 0 s chlSab2.chr16 44729 97 + 75148670 agacaggctcttgttctgttgcccaggct-----ggagtgcagcggtgcagtcacagttcag--------cct-----cccaggctcaaacgatcctctcacctcagcctcccga i chlSab2.chr16 I 22 C 0 s calJac3.chrUn_GL286409 858471 97 - 1291538 agacagggtcttgttctattgcccaggcc-----agagtgcagtggtgtgatcacagttcaa--------cct-----cccaggctcaagccatcctctcaagtcagcctcccaa i calJac3.chrUn_GL286409 I 15 C 0 s mm10.chr11 75790618 97 + 122082543 agacagggtttctctgtatagccctggctgtctgggaactcact-ttgtagac-caggttgg--------cct-------cgaactcaga-aatccacctgcctctgcctcccaa i mm10.chr11 C 0 C 0 s canFam3.chr9 15618616 92 - 61074082 gggcag---------------cccaggtggctcagaggtttagcgctgcctt--cagcccaggacatgatcctggagacccaggatcaag------tcccacgtcgggctcccta i canFam3.chr9 C 0 I 62 e rheMac3.chr16 41439 524 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=79098.000000 s hg38.chr17_GL383563v3_alt 115231 43 + 375691 gtagctgggactacaggcgcccaccaccatgcccggctaactt s panTro4.chr17 113236 43 + 82630442 gtagctgggactacaggcacccaccaccatgcccggctaattt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 11353 43 + 73212453 gtagctgggactacaggcgcccaccaccatgcccggctaattt i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 41158 43 + 80997621 gtagcagggactacaggtgcccaccaccatgcccagctagttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 52162 43 + 74645514 gtagcggggactacaggtgcccaccaccatgcccagctagttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 44826 43 + 75148670 gtagcggggactacaggtgcccaccaccatgcccagctatttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 858568 43 - 1291538 gtagctgggattacaggcgcacactgccatgcccagataatta i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75790715 39 + 122082543 gt-gctgggattaaaggcgtgtgccacca---ccgcccagttT i mm10.chr11 C 0 C 0 e canFam3.chr9 15618708 62 - 61074082 I e rheMac3.chr16 41439 524 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=5420.000000 s hg38.chr17_GL383563v3_alt 115274 3 + 375691 aaa- s panTro4.chr17 113279 3 + 82630442 aaa- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 11396 3 + 73212453 AAA- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 41201 3 + 80997621 aaa- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 52205 3 + 74645514 aaa- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 44869 3 + 75148670 AAA- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 858611 3 - 1291538 aaa- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75790754 3 + 122082543 AAA- i mm10.chr11 C 0 I 574 s canFam3.chr9 15618770 3 - 61074082 -aat i canFam3.chr9 I 62 C 0 e rheMac3.chr16 41439 524 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=-11641.000000 s hg38.chr17_GL383563v3_alt 115277 6 + 375691 ----aaat--at s panTro4.chr17 113282 6 + 82630442 ----aaat--at i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 11399 5 + 73212453 ----AAA---AT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 41204 4 + 80997621 ----aaat---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 52208 4 + 74645514 ----aaat---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 44872 6 + 75148670 ----AAATAT-- i chlSab2.chr16 C 0 I 99 s calJac3.chrUn_GL286409 858614 6 - 1291538 ----ccct--ct i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15618773 6 - 61074082 aaataa------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75790757 574 + 122082543 I e rheMac3.chr16 41439 524 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=2633.000000 s hg38.chr17_GL383563v3_alt 115283 26 + 375691 ------atttacaaaaaaagagac-agtg------------------------------------------gtgt s panTro4.chr17 113288 26 + 82630442 ------atttacaaaaaaagagac-agtg------------------------------------------gtgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 11404 26 + 73212453 ------ATTTACAAAAAAAGAGAC-ACTG------------------------------------------GTGT i ponAbe2.chr17 C 0 M 1161 s macFas5.chr16 41208 64 + 80997621 ------atttac----atagagac-agtggtgtgtgggggggggacagtggtgtgtgtgggggacagtggtgtgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 52212 22 + 74645514 ------atttac----atagagac-agtg------------------------------------------gtgt i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 858620 17 - 1291538 ------ttttac----acagagac-agt----------------------------------------------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15618779 32 - 61074082 ataaaatcttaaaaaaaaaAAGCCTACTG------------------------------------------GCT- i canFam3.chr9 C 0 C 0 e mm10.chr11 75790757 574 + 122082543 I e chlSab2.chr16 44878 99 + 75148670 I e rheMac3.chr16 41439 524 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=4025.000000 s hg38.chr17_GL383563v3_alt 115309 12 + 375691 --tggt---gcgggggg s panTro4.chr17 113314 15 + 82630442 --tggtggggggggggg i panTro4.chr17 C 0 C 0 s macFas5.chr16 41272 12 + 80997621 --gtgt---gtgggggg i macFas5.chr16 C 0 I 14 s papAnu2.chr16 52234 12 + 74645514 --gtgt---gtggggag i papAnu2.chr16 C 0 I 867 s calJac3.chrUn_GL286409 858637 12 - 1291538 --tggc---gggggggg i calJac3.chrUn_GL286409 C 0 I 3 s canFam3.chr9 15618811 14 - 61074082 Tgggac---accggggt i canFam3.chr9 C 0 C 0 e mm10.chr11 75790757 574 + 122082543 I e chlSab2.chr16 44878 99 + 75148670 I e rheMac3.chr16 41439 524 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 11430 1161 + 73212453 M a score=-5213.000000 s hg38.chr17_GL383563v3_alt 115321 5 + 375691 ---tgcgg s panTro4.chr17 113329 5 + 82630442 ---tgccg i panTro4.chr17 C 0 C 0 s macFas5.chr16 41298 3 + 80997621 ---tgt-- i macFas5.chr16 I 14 C 0 s papAnu2.chr16 53113 3 + 74645514 ---tgt-- i papAnu2.chr16 I 867 I 2 s calJac3.chrUn_GL286409 858652 2 - 1291538 ---gg--- i calJac3.chrUn_GL286409 I 3 C 0 s canFam3.chr9 15618825 5 - 61074082 cactc--- i canFam3.chr9 C 0 C 0 e mm10.chr11 75790757 574 + 122082543 I e chlSab2.chr16 44878 99 + 75148670 I e rheMac3.chr16 41439 524 + 80904711 I e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 11430 1161 + 73212453 M a score=356899.000000 s hg38.chr17_GL383563v3_alt 115326 295 + 375691 -gggggtaggtctcactacgttgctcaggc--tggtcttgaactcccgggctcaagcaatcctcccgccttcacctcccaaagtgctgggattacaggcA-CACACGGGCCACTCTGCCCTGGTCC--------------------------------------------------------------AAAaagcttttttttg---------------------------------------------------------gccactttgtttagctgaaatcttaggaggatgcaactaagaaacaaaaagagagaaaagcagagttgctctaggggaaggagagtgggggctcagCCGCT-----GCCCTGGAGAGCCCTCCGAGTTGGAAAAGCACCT-TGGGCTTGTGCTGGGCGTGAGG s panTro4.chr17 113334 295 + 82630442 -gggggtaggtctcactacgttgctcaggc--tggtcttgaactcccgggctcaagcaatcctcccgccttcacctcccaaagtgctgggattacaggca-cacacgggccactctgcccTGGTCC--------------------------------------------------------------AAAaagcttttttttg---------------------------------------------------------gccactttgtttagctgaaatcttaggaggatgcaactaagaaacaaaaagagagaaaagcagagttgctctaggggaaggagagtggggggtcAGCCGCT-----GCCCTGGAGAGCCCTCCGAGTTGGAAAAGCACCT-TGGGCTTGTGCTGGGCGTGAGG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 41963 318 + 80904711 -GGGGGCgggtctcacgacattgctcaggc--tggtcttgaactcctgggctcaagcaatcctcccgcctccacctcccaaagtgctgggattacagg-----cacgggccactctgcccTGGTCC--------------------------------------------------------------AAAAAGTGGTTTTTTTT---TGTTGTTGTTGTTTATTT--------------------------------TTTGCCActtcgtttagctgaaatcttaggaggatgcaactaagaaacaaaaagagagaaaagcagagttgctcttggggaaggagggtgagggctcagccgcctcgcGGCCCTGGAGAGCCCTCTGAGTTGGAAAAGCACCT-CAGGCTTGTGCTGGGAGTGACG i rheMac3.chr16 I 524 C 0 s macFas5.chr16 41301 318 + 80997621 -gggggcgggtctcacgacattgctcaggc--tggtcttgaactcctgggctcaagcaatcctcccgcctccacctcccaaagtgctgggattacagg-----cacgggccactctgcccTGGTCC--------------------------------------------------------------AAAAAGTGGTtttttgt---tgttgttgttgttTATTT--------------------------------TTTGCCActtcgtttagctgaaatcttaggaggatgcaactaagaaacaaaaagagagaaaagcagagttgctcttggggaaggagggtgagggctcagccgcctcgcGGCCCTGGAGAGCCCTCTGAGTTGGAAAAGCACCT-CGGGCTTGTGCTGGGAGTGACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 53118 317 + 74645514 --ggggggggtCTCAcaacgttgctcaggc--tggtcttggactcctgggctcaagcaatcctcctgcctccacctcccaaagtgctgggattacagg-----cacgggccactcTGCCCTGGTcc--------------------------------------------------------------aaaaagtgtttttttgt---tgttgttgctgtttattt--------------------------------tttgccACTTCGTTTAGCTGAAATCTTAGGAGGATGCaactaagaaacaaaaagagagaaaagcagagtTGCTCTTGGGGAAGGAGGGTGAGGGCTCAGCCGCTTCGAGGCCCTGGAGAGCCCTCTGAGTTGGAAAAGCACCT-CGGGCTTGTGCTGGGAGTGACG i papAnu2.chr16 I 2 C 0 s calJac3.chrUn_GL286409 858654 347 - 1291538 -gggggtaggtctcactatgttgctcaggc--tggtcttgaactcctgggctcaaatgatcctcccacctccacctcccaaagtgctgcgagtacagg-----cacaggccactccaccctgcTCC--------------------------------------------------------------AATAAGCttttatttttatattttattttatttCAGTCTTGTACTGAGTGAGACTCCAGTTTTAGGCCAGTTTGCCACTTTGTTTAGCTGAAATCTTAGGAGGATGCAACTAAGAATCGAAAGGAGAGAAAAGCAGAGTTGCTCTTGGGGAAGGAGGGTGGGGCTTCAG-CGCT-----TCCCTGGAGAGGCCTCCCAGTTGGAAAAGCACCT-CCATCCTGTGCTGGGAGTGAGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15618830 364 - 61074082 agtggttgagcatctgcctttgggtcaggtcgtgaccccggggtcctgggatcgagt-----ccccgcatcgggctcc-------------ttgcagggagcctgcttctccctctgcctgtgtctctgcctctctgtgtctctctctctctcttgaatgaatgaatgaatgaataaatcttaaaaaaaaaaaAAGCCTACTGGCATCCCCTCCCCCCCTTTTTTG--------------------------------TCTGCTACTTTGTGTAGCTGAAATCTCAGGATGATGCAACAGAGAACC--AGAGAGAGAAAAGCAGAGTTGCTGACAGGGACAAGG---GAGGGCTGGGCCACC-----GTCCTAGAGGGGCCTCTGAGCTGGAAAGGGAGCTGTGGGCTTCTGGTACAGATAAGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75790757 574 + 122082543 I e chlSab2.chr16 44878 99 + 75148670 I e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 11430 1161 + 73212453 M a score=684067.000000 s hg38.chr17_GL383563v3_alt 115621 379 + 375691 AGGGCCCTAAGGGCAGGAGAAGGTGCTTCTCTGT--GACCCAC---------AGTGCCCTGCCCTTGGAG-CGCTCCAATCACATGACCCCACTGAAGTTTACATCTTCGGAAAAATAATGAGGGTTGGTCACTAATGGGCCTTTGAGAGTTGTCACCCGCTTGTCGATAATTACAGAGCTTTAATGGGGCTAATTCAGAGAAAATCAAGCTCAAGCCCCTGTTGGCTCCTCTAAGGCCGAGCACC-CCCTGCTTGGCTGATGTAGACCTGACAGCATCATCATAACCTTGGTTTGCACCTGGACTTTCCTGA--------CAC-----CCTTGGGAATAGGAAATCTGCCCTGA------------tttt-----tttttttttttttttAAGAAAAA-----------TGTCAGGCTCTCAAATACTTT-AA s panTro4.chr17 113629 378 + 82630442 AGGGCCCTAAGGGCAGGAGAAGGTGCTTCTCTGT--GACGCAC---------AGTGCCCTGCCCTTGGAG-CGCTCCAATCACATGACCCCACTGAAGTTTACGTCTTCGGAAAAATAATGAGGGTTGGTCACTAATGGGCCTTTGAGAGTTGTCACCCGCTTGTCGATAATTACAGAGCTTTAATGGGGCTAATTCAGAGAAAATCAAGCTCAAGCCCCTGTTGGCTCCTCTAGGGCCGAGCACC-CCCTGCTTGGCTGATGCAGACCTGACAGCATCCTCATAACCTTGGTTTGCGCCTGGACTTTCCTGA--------CAC-----CCTTGGGAATAGGAAATCTGCCCTGA--------------TT-----TTTTTTTTTTTTTTTAAGAAAAA-----------TGTCAGGCTCTCAAATACTTTAAA i panTro4.chr17 C 0 C 0 s rheMac3.chr16 42281 375 + 80904711 AGGGCCCTAAGGGCAGGAGAAGGTGCTTCTCTGT--GAGCCAC---------AGTGCCCTGCCCTTGGAG-CGCGCAAATCACATGACCTCACTGAAGTTTACATCTTCGAAAAAATAATGAGGGCTGGTCACTAATGGGCCTTTGAGAGTTGTCACCCGTTTGTCGATAATGATAGAGCTTTAATGGGGCTAATTCAGAGAAAATCAAGCTCAAGCCCTTGTTGGCTCCTCTAAGGCCAAACACCTCCCTGCTCGGCTGATGGAGACC-GACAGCATCACCATAGCCTTGGTTTGTGCCTGGACTTTCCCGA--------CAC-----CCTTGGGAATAGGAAATCTACCCTGA------------TTTC------TTTTTTTTTTTTGGAAGAAAAA-----------TATCAGGCTCTCAAATAGTT---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 41619 380 + 80997621 AGGGCCCTAAGGGCAGGAGAAGGTGCTTCTCTGT--GAGCCAC---------AGTGCCCTGCCCTTGGAG-CGCGCAAATCACATGACCTCACTGAAGTTTACATCTTCGAAAAAATAATGAGGGCTGGTCACTAATGGGCCTTTGAGAGTTGTCACCCGTTTGTCGATAATGATAGAGCTTTAATGGGGCTAATTCAGAGAAAATCAAGCTCAAGCCCCTGTTGGCTCCTCTAAGGCCAAACACCTCCCTGCTCGGCTGATGGAGACC-GACAGCATCACCATAGCCTTGGTTTGTGCCTGGACTTTCCCGA--------CAC-----CCTTGGGAATAGGAAATCTACCCCGA------------tttc-tttttttttttttttttGGAAGAAAAA-----------TATCAGGCTCTCAAATAGTT---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 53435 381 + 74645514 AGGGCCctaagggcaggagaaggtgCTTCtctgt--gagccac---------agtgccctgccCTTGGAG-CGCGCAAATCACATGACCTCACTGAAGTTTACATCTTCGGAAAAATAATGAGGGCTGGTCACTGATGGGCCTTGGAGAGTTGTCACCCGTTTGTCGATAACGATAGAGCTTTGACGGGGCTAATTCAGAGAAAATCAAGCTCAGGCCCCTGTTGGCTCCTCTGAGGCCGGACGCCTCCCTGCTCGGCTGATGGAGACC-GACAGCATCACCATAACCTTGGTTTGTGCCTGGACCTTCCCGA--------CAC-----CCTTGGGAATAGGAAATCtaccctga------------tttcttttttttttttttttttggaagaaaaa-----------tatcaggctctcaaatagtt---- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 859001 399 - 1291538 AGGG-CCTGGGGGCAGGGGAAGGCGCTTCTCTATGAGAGCCAC---------AGTGCCCTACCCTTGGAG-CGCCCAAATCACATGGCCCCACTGAAGTTTACATTTTCAGAGAAATAATGAGGGTTGGTCACTAATGGGCCTCTGAGAGTTCTCACCCGCCTGTCGATAATTATAGAGCTTTAATGGGGCTGATTCAAAGAAAATCCAGCTCAAGCCCCTGTTGGCTCCTCCAAAGCTGAACACA-CCCCGCCTGGCTGATGGAGACT-GACAGCATCACCATAACCTTGCTTTGTGCCTGGACTTTCCTGACCCACG--CAC-----CCTTGGGAATAGGAAATCTGCCCTGA------------TTTCTTTCTTTTTTTTTTTTTTGGAAGAAAAAAGAAAATCTCTTTGTAAACTCTCAAATAGTTT--- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75791331 389 + 122082543 AGGGCCCAAAGGACGAGAGAACGTGCCTCTCTGC--AAGCCCCAGGATCTCGAGGGCCTTGCCCTTAGAGCCACTCAGATCACAGGCCCTGATGAAAGTTTACATCTTTGGAAAAATAATGAAGGTTGGTCACTAATGGGCCTCTGAGAGTTGTCACTGACTTGCTGATAATTATAGCGCTTTAATGGGGCTAATTCAGAGAAAATCAAGCACAAGGCCCTGTTGCTTCCTCTGAGGCTGAGCGTTCCCCAACAGGGCCAGTGCAGACA-GGCAGC-TGGCGGTGACCTTGTTCTGCACTTGAACTCCCTTGA--------CCCGTCCACCCTGGGAATCAGAAATCCGTCC-----------------TT-----TTTGTTTGTATTTGGAAGAAAAAA----------AATCAGCCTCTAAAATAGTTTCA- i mm10.chr11 I 574 I 177 s canFam3.chr9 15619194 406 - 61074082 AGGGTCCTAAGGGTAGGGGAAGGTGCTTATCTGTGTGAGCCAC---------TGCATCCTGCCCTCCACC-CACTGAAGTCACATGCCCTGGCTAAAGTTTACAACCTTGGAAAAATAATGAGGGTTGGTCACTAATGGGCCGGTGAGAGTTGTCACTCGCTTGTCGATAATTATAGAGCTTTAATGGGGCTAATTCAGAGAAAATCAGGCTCAAGCCCCTGTCAGTTCCTGTAAGGCCAAACATCCCTTTGCTCTGCTGATGGAGACT-GACAGCATCATTCTGACATTGGTTTGTACCTGGACTTTCCTCACCCCCGTATAC-----CCTTGGGAATAGGAAATCAGCCCTTGCTCGtttttttgtttttgtttttgtttttttttttTAAGAAAAA-----------TGTCAGTCTCTCAAATAGTTCTA- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 44878 99 + 75148670 I e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 11430 1161 + 73212453 M a score=15051.000000 s hg38.chr17_GL383563v3_alt 116000 19 + 375691 AAAAAAAACAAAACAATTG s panTro4.chr17 114007 19 + 82630442 AAAAAAAACAAAACAACTG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 42656 16 + 80904711 ---AAAAAAAAAAAATCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 41999 18 + 80997621 -AAAAAAAAAAAAAATCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 53816 15 + 74645514 ----aaaaaaaaaaatctg i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 859400 18 - 1291538 -ACAAAGACAAAACAACTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75791897 19 + 122082543 AAAAAGTACAATAAAAATG i mm10.chr11 I 177 I 15 s canFam3.chr9 15619600 8 - 61074082 -----------AAAAACTG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 44878 99 + 75148670 I e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 11430 1161 + 73212453 M a score=674167.000000 s hg38.chr17_GL383563v3_alt 116019 336 + 375691 TGGCAAGGAC-CATAGAAAATCATCAAGCTTGTGTTGAAAGCATTTTATAGTTGGGGAAAC------AGCCATTCAGCCAGGCCGGCACTGCAGGGGGGACAGAGAGAAATGAGCCAT---------------------------------CATCCCTGCTTCCCAGGAG--CTTAGAGAC---------GAGTGTTAAGATTTTTATAAACATCTtcattc-------------------atctgctttaaattgttgaaaggt----tctccatcaactcctggactcagttcaacctccttggtgtggcattcaagaccttgtgt----gatatgaccgctttggcctcc-tcataggtctcttccccttctttgagccacttggctctactgttttgcctacact-gggctg s panTro4.chr17 114026 336 + 82630442 TGGCAAGGAC-CATAGAAAATCATCAAGCTTGTGTTGAAAGCATTTTATAGTTGGGGAAAC------AGCCATTCAGCCAGGCCGGCACtgcaggggggacagaaagaaatgagccat---------------------------------catccctgcttcccaggag--cttaaagac---------gagtgTTAAGATTTTTATAAACATCTtcattc-------------------atctgttttaaattgttgaaaggt----tctccatcaactcctggactcggttcaacctccttggtgtggcattcaagaccttgtgt----gatatgaccgctttggcctcc-tcataggtctcttccccttcttggagccacttggctctactgttttgcctacact-gggctg i panTro4.chr17 C 0 C 0 s rheMac3.chr16 42672 337 + 80904711 TGGCAAGGAC-CATAGAAAACCATCAAGCTTGTGTTGAAAGcattttatagttggggaaac----tgagccactgagCCAGGCCAGCACTGCAGGGAGGACAGACAGAAATGAGCCGT---------------------------------CATCCCTGCTTCCCAGGAG--CTTAGAGAT---------GAGTGTTAAGATTTTTATAAACATCTTCA-tc-------------------atctgctttaaattgttggaaggt----tctccatcaactcctggactcagttcaacctccttggtgtggcctttaagaccttctgt----gatatgaccgctttggcctcc-tcataggtcccttccgcttctttgagccacttggttctattgttttgcctacact-gggctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 42017 337 + 80997621 TGGCAAGGAC-CATAGAAAACCATCAAGCTTGTGTTGAAAGcattttatagttggggaaac----tgagccactgagCCAGGCCAGCACTGCAGGGAGGATAGACAGAAATGAGCCGT---------------------------------CATCCCTGCTTCCCAGGAG--CTTAGAGAT---------GAGTGTTAAGATTTTTATAAACATCTTCA-TC-------------------ATCTGCTTTAAATTGTTGGAAAGT----TCTCCATCAACTCCTGGACTCAGTTCAACCTCCTTGGTGTGGCCTTTAAGACCTTCTGT----GATATGACCGCTTTGGCCTCC-TCACAGGTCCCTTCCGCTTCTTTGAGCCACTTGGTTCTATTGTTTTGCCTACACT-GGGCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 53831 339 + 74645514 tggcaAGGAC-CATAAAAAACCATCAAGCTTGTGTTGAAAGCATTTTATAGTTGGGGAAAC----CGAGCCACTGAGCCAGGCCGGCACTGCAGGGAGGATAGACAGAAACGAGCCGT---------------------------------CATCCCTGCTTCCCTCTAACCCTTAGAGAT---------GAGTGTTAAGATTTTTATAAACATCTTCA-TC-------------------ATCTGCTTTAAATTGTTGGAAGGT----TCTCcatcaactcctggactcagttCAACCTCCTTGGTGTGGCCTTTAAGACCTTCTGT----GATATGACCGCTTTGGCCTCC-TCATAGGTCCCTTCCGCTTCTTTGAGCCACTTGGTTCTATTGTTTTGCCTACACT-GGGCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 44977 337 + 75148670 TGGCAAGGAC-CATAGAAAACCATCAGGCTTGTGTTGAAAGcattttatagttggggaaac----tgagccactgagCCAGGCCAGCACTGCAGGGAGGATAGACAGAAATGAGCCGT---------------------------------CATCCCTGCTTCCCAGGAG--CTTAGAGAT---------GAGTGTTAAGATTTTTATAAACATCTTCA-TC-------------------ATCTGCTTTAAATTGTTGGAAGGT----TTTCTATCAACTCCTGGACTCAGTTCAACCTCCTTGGTGTGGCCTTTAAGACCTTCTGT----GATATGaccgctttggcctcc-tcataggtctcttccgcttctttgagccacttggttctattgttttgcctacact-gggctg i chlSab2.chr16 I 99 C 0 s calJac3.chrUn_GL286409 859418 346 - 1291538 TGGCAAGGAC-CACAGAAAATCATCAAGCCTGTGCTGAAAGCATTTTATACTCGGGGAATC----TGAGGCACAGAGCCAGTCAGCCACTGCAGGG-GGATAGAGAGGAATGAGCCAT---------------------------------CATCCCTGCTTCCCATCAC--CTTAGAGAT---------GAGTGTTACGATTTTTATAAATATCTTCATTC-------------------ATCTGCTTTAAATTGTTCAAAGATTCTCTCTCCATCAACTCCTGGACTCCGTGCAGCCTCCTTGGTGTGGCATTC-AGACCTTCTGTGACAGATATGACTGCTTTGGGCTCCTTCATCGATCTCGATCCCTTGTTCAGCCCCCTTGGCTCTATTGTTTCACCTACACCGGGGCTG i calJac3.chrUn_GL286409 C 0 I 253 s mm10.chr11 75791931 363 + 122082543 TGGCAAGAATGCATAGAAAATTATCACGCCTGACTTGAAAGCA-CTTATAAGTGGGGAGAT----TGAGACCCTGAACTAGGTTGGCACCGTGGGAGAGGATGCAAGGAATGAGTGATGCAAGGAATGAGTGATGCGAGGAATGAGTAATATATCTCTACTTTGC-GGAG--TCTAGAGAC----------AGAGCTGAGACTTT----AGCTCCTTTA-TCCCCCCCCCCAACCCCCACTCCCTGCTTCAAGTCTTTCAGAAGT---------------CCATGG---CGTTGAGACATCCTTAGTTTGGCATTTACACCTTTCTAT-------ATGATCGCTGTGACCTCA-TCA---GCCCCTCTCCTTTGCCTTAGACACTTGCTCCTTCTACCATGCCTCCACT-GGTCTG i mm10.chr11 I 15 C 0 s canFam3.chr9 15619608 315 - 61074082 TGGCAAGAAC-CACAGAAAGT-------------------GCATTTCATAGATGGGGAGGCACTATGAGGCACTGAGC----CTAGCACtgcaggggagacaaagaagaaggagccct--------------------------------atgtccctgcctcccaggag--ctcagagGCCAAGGATTAGAACTTTAGGACCTTCAGAAGTCTATTCATTC-------------------TCCCGCTTTAAATTATTCAAAGGT----TCACCACTGCCCCCTGGACTTGGTTTAACCTCCTTGGTGTAGCATTTAAGGCCCTCTGT---------GACCACTTTGTCCTCA-TTCTGGGTCTTTCTCCCTTACTTCAGACACTTG-----ACTGTGGCACCT---CT-GGGTT- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 11430 1161 + 73212453 M a score=256238.000000 s hg38.chr17_GL383563v3_alt 116355 116 + 375691 agtttctgacacttcaggacctgtgtacacagctgtccctctgccaagagcacctccctttcctcttttccctctgtcagcccacctcctccctcctcccagtcttagggctgagc s panTro4.chr17 114362 116 + 82630442 agtttctgacacttcaggacctgtgtacacagctgtccctctgtcaagagcacctccctttcctcttttccctctgtcagcccacctcctccctcctcccagtcttagggctgagc i panTro4.chr17 C 0 C 0 s rheMac3.chr16 43009 116 + 80904711 agattctgacacttcaggacctgtgtacacagctgtccctctgccaggagcacccccctttcctctttcccctctgccagcccacctcctccctcccccccgtcttagggttgagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 42354 116 + 80997621 AGATTCTGACACTTCAGGACCTGTGTACACAGCTGTCCCTCTGCCAGGAGCAcccccctttcctctttcccctctgccagcccacctcctccctccccccCGTCTTAGGGTTGAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 54170 116 + 74645514 AGATTCTGACACTTCAGGACCTGTGTACACAGCTGtccctctgccaggagcacccccctttcctctttcccctctgccagcccacctcctccctcccccccgTCTTAGGGTTGAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 45314 116 + 75148670 agattctgacacttcaggacctgtgtacacagctgtccctctgccaggagcacctccctttcctcttccccctctgccagcccacctcctccctcccccccgtcttagggttgagc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 860017 116 - 1291538 AGTTTCTGACACTTCAGAACCTGCGTACACAGCTGTCCCTCTGCCAGGAGCACCTCCCTTTCCTCCTTCCCCTCTGCCAGCCCACCTCCTCCCTCTTCCCAGTCTTACAGCTGAGC i calJac3.chrUn_GL286409 I 253 C 0 s mm10.chr11 75792294 95 + 122082543 TGCTTCTGACATTTCCATTCCT-------CTGCTGCTCCCCT----------CCCCCAACTCCCCTT--AACTCTGCCAGCC--TTTTTTCCCCTTCCCCTGCCTCAGAGCTGAGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15619923 108 - 61074082 -GTTTCTTCTACCTC--TACCTGTGCACATGGCAGTCCCTGTGTCAGGAGCATCTTGCTTTCCTAATTCCACT----TAGCCTGCTTCCTCCCTTCTCCCAGCCT-GGAGCAGAAC i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 11430 1161 + 73212453 M a score=1511767.000000 s hg38.chr17_GL383563v3_alt 116471 621 + 375691 cctctctgtgagtgacctccgcctgccagagctttccatctgggttcttgcctccctgtccctcgctgtagggtcacctgtttgtcttggttttgatgaacaccctcaggtcagaggttgcctctca-gcattcttgtatctc---tgtgcctaacacagagcctgccacatagttggtgcCGTAACATCGAGTGCATTACAAATATCACAGGTCCAGGTAGAACATGACTGGGG-CCAAAGAGGTTCTGGGCTCAAAGGAAGGGGCACCACAGCCCATGGGGGCTGGAATATGCCCCCTAACACGGAGAACCTTTGTG---GTGGACTCAA-----------CCCCTTGTCCTTGCTCCAGACCTGCACAGGCATCGGTCCTGACCCGGTCCTGGGTGAACCACACAG-GGCAggtttaa-cacgggcatgtgatccaattctggccaatgagacaaaaggacaggtctcctggggacttctgggagaggtttcctcgctcttaaactgagacatgagaaaaggaatcggtccttaccaattccttacccagtca---aggacc---------ttattgttacatgtgatgcctgg--acctgcagcagccaccttggacc-tgagggTCCTGCTTGGCTGATGGAGACTGACAGC s panTro4.chr17 114478 621 + 82630442 cctctctgtgagtgacctccgcctgccaaagctttccatcggggttcttgcctccctgtccctcgctgtggggtcacctgtttgtcttggttttgatgaacaccctcaggtcaaaggttgcctctca-gcattcttgtatctc---tgtgcctaacacagagcctgccacatagttggtgctgtaaCATCGAGTGCATTACAAATATCACAGGTCCAGGTAAAACGTGACCGGGG-CCAAAGAGGTTCTGGGCTCAAAGGAAGGGGCACCACAGCCCATGGGGGCTGGAATATGCCCCCTAACACGGAGAACCTTTGTG---GTGGACTCAA-----------CGCCTTGTCCTTGCTCCAGACCTGCACAGGCATCAGTCCTGACCCGGTCCTGGGTGAACCACACAG-GGCAggtttaa-cacgggcatgtgatccaattctggccaatgagacaaaaggacaggtctcctggggacttctgggagaggtttcctcgctcttaaactgagacacaagaaaaggaatcggtccttaccaattccttacccagtca---aggacc---------ttattgttacatgtgatgcctgg--acctgcagcagccaccttggacc-tgagggTCCTGCTTGGCTGATGGAGACTGACAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 12630 570 + 73212453 CCTCTCTGTGAGtgacctccgccagccagagctttccatctgggttcttgcctccctgtccctcgctgtggggtcacctgtttgtcttggttttgatgaagaccctcaggtcagaggttgcctgtca-gcattcttgtatctc---tgtgcctaacacagagcctgccacatagttggtgctgtaacgttgagtgcatTACAAATATCACAGGTCCAGGTAGAACATGACTGGGG-CCAAAGAGGTTCTGGGGTCAAAGGAAGGGGCACCACAGCCAGTGGGGGCTGGAATATG-CCCCTGACAAGGAGAACCTTTGTG---GTGGACT-----------------------------------------------------------GGTCCCGGGTGAACCACACGG-GGCAggtttaa-cacgggcatgtgatgcaattctggccaacaagacaaaaggacaggtctcctggggacttctgggagaggtttcctcgctcttaaactgagacacgagaaaacgagtcgg-----------tccttacccagtca---aggaccgattacttgtgattgttacatgtgatgcctgg--acctgctgcagccaccttggacc-tgagggTCCTGCTTGGCTGATGGAGACTGACAGC i ponAbe2.chr17 M 1161 C 0 s rheMac3.chr16 43125 613 + 80904711 cctctctgtgagtgacctccgcgagccagagcttcccatttgggttcctgcttccctgaccctcgctgcagggtcccctgtttgtcttggttttgatgaataccctctggtcagagatggcctctca-gcactcttgtatgttacacgtgcgtgacacagagcctgacacataggtggtgctgtaacattgagtgcattaaAAATATCACGGGTCCAGGTAGAACATGACTGGGG-CCAAAGAGGTTCTGGGCTCAAAGGAAGGGGCACCACAGCCAGTGGGGGCTGGAATATGCCCCCTGACAAGGAGAACCTTTGAG---GTGGACTCAA-----------CACTTTGTCCTTGCTCCAGACCTGCATGGGCATCAGTCCTGACCCGGTCCCGGGTGAACCACACGG-GGCAggtttaa-catggacatatgaggcaatgctggccaacaagacaaaaggacaggtctcccggggacttctcggagaggtttccttgctcctaaactgagacacgagaaaaggaatcag-----------tccttacccagtca---aggacc---------ttattgttacgggtgatgcctgg--acctgcagcagccaccttggacc-cgagggTCCTGCTTTGCTGATGGAGACTGACAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 42470 613 + 80997621 CCTCTCTGTGAGTGACCTCCGCGAGCCAGAGCTTCCCATTTGGGTTCCTGCTTCCCTGACCCTCGCTGCGGGGTCCCCTGTTTGTCTTGGTTTTGATGAATACCCTCCGGTCAGAGATGGCCTCTCA-GCACTCTTGTATGTTACACGTGCGTGACACAGAGCCTGACACATAGGTGGTGCTGTAACATTGAGTGCATTAAAAATATCACGGGTCCAGGTAGAACATGACTGGGG-CCAAAGAGGTTCTGGGCTCAAAGGAAGGGGCACCACAGCCAGTGGGGGCTGGAATATGCCCCCTGACAAGGAGAACCTTTGAG---GTGGACTCAA-----------CACTTTGTCCTTGCTCCAGACCTGCATGGGCATCAGTCCTGACCCGGTCCCGGGTGAACCACACGG-GGCAggtttaa-catggacatatgaggcaatgctggccaacaagacaaaaggacaggtctcctggggacttctcggagaggtttccttgctcctaaactgagacacgagaaaaggaatcag-----------tccttacccaatca---aggacc---------ttattgttacgtgtgatgcctgg--acctgcagcagccaccttggacc-cgagggTCCTGCTTTGCTGATGGAGACTGACAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 54286 613 + 74645514 CCTCTCTGTGAGTGACCTCCGCAAGCCAGAGCTTCCCATTTGGGTTCCT-CTTCCCTGACTCTCGCTGT-GGGTCACCTGTTTGTCTTGGTTTTGATGAATACCCTCCGGTCAGAGACTGCCTCTCA-GCGTTCTTGTATGTTACACGTGCATGACACAGAGCCTGCCACATAGGTGGTGCTGTAACACTGAGTGCATTAAAAATATCACGGGTCCAGGTAGAACATGACTGGGG-CCAAAGAGGTTCTGGGCTCAAAGGAAGGGGCACCACAGCCAGTGGGGGCTGGAATATGCCCCCTGACAAGGAGAACCTTTGCG---GTGGACTCAA-----------CACTTTGTCCTTGCTCCAGACCTGCATGGGCATCAGTCCTGACCCGGTCCCGGGTGAACCACACGG-GGCAGGTTTAA-CATGGACATATGAGGCAATGCTGGCCAACAAGATAAAAGGACAGGTCTCCTGGGGACTTCTCGGAGAGGTTTCCTTGCTCCTAAACTGAGACACGAGAAAAGGAATCAG-----------TTCTTACCCAATCA---AGGACC---------TTATTGTTACGTGTGATGCCTGGACACCTGCAGCAGCCACCTTGGACC-CGAGGGTCCTGCTTTGCTGATGGAGACTGACAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 45430 612 + 75148670 cctctctgtgagtgacctccgcgagccagagcttcccatttgggttcct-cttccctgaccctcactgcggggtcacctgtttgtcttggttttgatggataccctccggtcagagattgcctctca-gcactcttgtatgttacacgtgcgtgacacagagcctgccacacagttggtgctgtaacattgagtgcattaaAAATATCACGGGTCCAGGTAGAACACGACTGGGG-CCAAAGAGGTTCTGGGCTCAAAGGAAGGGGCACCACAGCCAGTGGGGGCTGGAATATGCCCCCTGACAAGGAGAGCCTTTGCG---GTGGACTCAA-----------CACTTTGTCCTTGCTCCAGACCTGCATGGGCATCAGTCCTGCCCTGGTCCCCGGTGAACCACACGG-GGCAggtttaa-catgggcatatgaggcaacgctggccaacagaacaaaagggcaggtctcctggggacttctgggagaggtttccttgctcctaaactgagacacgagaaaaggaatcag-----------tccttacccagtca---aggacc---------ttattgttacgtgtgatgcctgg--acctgcagcagccatcttggacc-cgagggTCCTGCTTTGCTGATGGAGACTGACTAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 860133 568 - 1291538 CCTCTCTATGAGTGACCTCTGCAAGCCAGAGCTTCCCACTGGGGTTCTTGCCTCCCTGTACCTCGCTGCAGGGCCGCTTGTTTTTCTTGGTTTTGATGAACACCCTCAACTCAGAG-TTACCTCTCA-GCATTCTTGTCTCTC---TGTGCCTAGCACAGATGCTGCCACA----TGGTGCTGTAATGTTGAGTGCATTAAAAATATGACAGGTCCAGGTAGAACATGACTGGAG-CCAAAGAGCTTCTGGGCTCAAAGGAAGGGGCACCAGAGCTGGTGGGGGCTGGAACATGCCCCCTGCCAAGGAGAGCCTTGGTG---GTGCACTCGA-----------CACTTTGTCCTTGCCCCAGACCTGCATGGAAATCAGTCCTGACCCAGCCCtgg---------------------------------------tgcaattctggccaatgagaccaaaggacaggtctcctggggacttccagaagaggtttcctcactcttaaactgagacacgagagaagaaattgg-----------tccttacccaaggg---aggacc---------ttatcattacatgcaatgcctag--acccgcagcagccaccttggacc-tgagggCTCTGTTTGGCTGTTGGAGATGGACAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75792389 525 + 122082543 --CCTCTGAGGATG--------------------------------TCTGCCTCCCCATCCCTCA-TGTTGGGCCTCTTG-----CTGAGTTTCTGTGACTGTCCTAAGATGAGAGACTGTGGTCCA-GCC---------------CATGCCTGGACGGTGTCCTGACACACAATTGGCATTATACTGTTGAATAT---------------------GATAGAATATGATGGAGGCCCAAAGGCATTCTGGG--TGAAGGAAGAGGCATGCACTTCAGT---AGCTACGACATG--CCATGCCCAGGAGAACCTTCTAG---GAAGACCCGACAATGGTTTCCCACTTCACCCTTGCTCCATACCTCCCTGGGCTCCCGTCCTGACCTAG--CTGagtgagtcatttgg-g--------aa-catgggcacgtgatgcacttctagccaatgagacaaaaggacaagcctcctgggaacttct--aagagattttctggatcct------agacatgagaatagaacata------------ttttgtttaaatcaaataagatc---------ttcta--tatatgtgatgcctgg--acccacagcagccaccttggatcatgagggTCCCGCTTAGCTGATGGAGTCTGAGAGC i mm10.chr11 C 0 C 0 s canFam3.chr9 15620031 556 - 61074082 CTTCTCTGTGGGTAAACTATGTAAACCAGCACTT-CCATTTGGGTTGCTGCCTCCCT-CTCGTCACTGCTGGGCTACTTGTGCCTCTGTGTTTCCACGAACTCCCTCATGTCAGAGACTCTGTCTCAGGCATTCTTAAATCTC----------AGCACAGTGCCCGACACACAGCTGATCTTCTTATGTTGAGTATATAAA---------------------------ACTGTGG-TCTGAGCCGGCATGTGC-GGAAGGAAGGGGACTCGCAACCAGCAGGGACTGGGAAATGCTCCCAGCT---GAGGGCCTTTGGGACAGTGCTTCCTC-----------CACTCCATCCTTGCTCCAGGCGCTCATGGGCACCACTCCTGACCCAGCCCAGGGTGAATCATGTAACGGCAggtgtaagcgcaggcatgtgacacaattctggccaatgagacagaaggacaggtctcctggggac-tctgggagagctctcctcactttccaaccgagatatgggcaaggaaacttg-----------tccttctcatattt---aggatc---------ttagtgttacatgtgacacctgg--accaacagcagccaccctggacc-ag----------------gagggaggtcagc--- i canFam3.chr9 C 0 T 1128 e nomLeu3.chr19 81496740 0 + 81552678 I a score=228249.000000 s hg38.chr17_GL383563v3_alt 117092 70 + 375691 GTCATTCTGACTTTGGTCTGCACCTGAACCTTCCTCA--CCCAGACACCCTTAGGAATAGGAAACGGGCCTT s panTro4.chr17 115099 70 + 82630442 GTCATTCTGACCTTGGTTTGCACCTGAACCTTCCTCA--CCCAGACACCCTTAGGAATAGGAAACGGGCCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 13200 70 + 73212453 GTCATTCTGACCTTGGTTTGCACCTGAACCTTCCTCA--CCTAGACACCCTTAGGAATAGGAAACGGGCCTT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 43738 70 + 80904711 GTCATTCTGACCTTGGTTTGCACCTGAACCTTCCTCA--CCCAGACACCCTTTGGAATAGGAAATGGGCCTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 43083 70 + 80997621 GTCATTCTGACCTTGGTTTGCACCTGAACCTTCCTCA--CCCAGACACCCTTTGGAATAGGAAATGGGCCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 54899 70 + 74645514 GTCATTCTGACCTTGGTTTGTACCTGAACCTTCCTCA--CCCAGACACCCTTTGGAATAGGAAATGGGCCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 46042 70 + 75148670 GTCATTCTGACCTTGGTTTGCACCTGAACCTTCCTCA--CCCAGACACCCTTTGGAATAGGAAATGGGCCTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 860701 70 - 1291538 ATCATTCTGACCTTGGTTTGCGCCTGAACCTTCCTTA--CCCAGGCACCCTTGGGAATAAGAAATTGGTCTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75792914 69 + 122082543 ATCATTGTGACTAGGTTCTGCATTTG-ATGTTCCTTA--TCCATATGCCCTTGGGAATAGAGAACCTGCCCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15619459 72 - 61074082 ATCATTCTGACATTGGTTTGTACCTGGACTTTCCTCACCCCCGTATACCCTTGGGAATAGGAAATCAGCCCT i canFam3.chr9 T 1128 I 1056 e nomLeu3.chr19 81496740 0 + 81552678 I a score=13069.000000 s hg38.chr17_GL383563v3_alt 117162 9 + 375691 GA-TTTTGCT s panTro4.chr17 115169 9 + 82630442 GA-TTTTGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 13270 9 + 73212453 GA-TTTTGCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 43808 10 + 80904711 GATTTTTGGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 43153 10 + 80997621 GATTTTTGGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 54969 10 + 74645514 GATTTTTGGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 46112 10 + 75148670 GATTTTTAGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 860771 10 - 1291538 GATTTTCTGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75792983 10 + 122082543 GGTTTTCAGC i mm10.chr11 C 0 C 0 e canFam3.chr9 15619531 1056 - 61074082 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=604556.000000 s hg38.chr17_GL383563v3_alt 117171 221 + 375691 CTACAAGGAAAAACGCACAGCCACGAGCAAAGAT-------GGACAGAACCATCACCCC-AACAGTGCTGAGGGGCTGCTGCATTGGTGCACCCTGG----TGCAGCAAGACCTCAGCTGtcctca--ttgtttaagccactctgagttggttatctgtcacttgcaacccatggcactctaGTGATTACagctttgaagaatggactgggcttccacaggtgggtgccgggcag s panTro4.chr17 115178 222 + 82630442 CTACAAGGAAAAGCGCACAGCCACGAGCAAAGAT-------GGACAGAACCATCACCCCTGACAGTGCTGAGGGGCTGCTGCATTGGTGCACCCTGG----TGCAGCAAGACCTCAGCTGtcctca--ttgtttaagccactctgagttggttatctgtcacttgcaacccatggcactctaGTGATTACAGCTTTGAAGAATGGACTGGGCTTCCACAGGTGGGTGCCGGGCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 13279 221 + 73212453 CTATAAGGAAAAGCACACAGCCACGAGCAAAGAT-------GGACAGAACCATCACCCCTGACAGTGCTGAGGGGCTGCCGCATTGGTGCA-CCTGG----TGCAGCAAGACCTCAGCTGtcctca--ttgtttaagccactctgagttggttttctgtcacttgcaacccacagcactctaGTGATTACagctttgaagaatggactgggcttccacaggtgggggccgggcag i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 43818 229 + 80904711 CTACAAGGAAAAGCGCACAGCCACGTGCAAAGACCATCCATGGACAGGACCATCACCCCTGACGGTGCTGAGGTGCTGACACATTGGTGCACCCTGG----TGTGGCAAGACCTCAGCTGtcctca--ttgtttaagccgctctgagttggttttctgtcacttgccacccacagcactctaGTGATTACAGCTTTGAAGAATGAACTGGGCTTCCACAGGTGGGGACCAGGCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 43163 222 + 80997621 CTACAAGGAAAAGCGCACAGCCACGTGCAAAGAC-------GGACAGGACCACCACCCCTGACGGTGCTGAGGTGCTGACACATTGGTGCACCCTGG----TGTGGCAAGACCTCAGCTGtcctca--ttgtttaagccgctctgagttggttttctgtcacttgcaacccacagcactctaGTGATTACAGCTTTGAAGAATGAACTGGGCTTCCACAGGTGGGGACCAGGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 54979 222 + 74645514 CTACAAGGAAAAGCGCACAGCCACGTGCAAAGAC-------GGACAGAACCATCACCCCTGACGGTGCTGAGGTGCTGACACATTGGTGCACCCTGG----TGTGGCAAGACCTCAGCTGTCctca--ttgtttaagccactctgAGTCAGTTTTCTGTGACTTGCAACCCACAGCACTCTAGTGATTACAGCTTTGAAGAATGAACTGGGCTTCCACAGGTGGGGACCAGGCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 46122 222 + 75148670 CTACAAGGAAAAGCGCACAGCCACATGCAAAGAC-------GGACAGGACCATCACCCCTGACGGTGCTGAGGTGCTGACACATTGGTGCACCCTGG----TGTGGCAAGACCTCAGCTGtcctca--ttgtttaagccgctctgagttggttttctgtcacttgcaacccacagcactctaGTGATTACAGCTTTGAAGAATGAACTGGGCTTCCACAGGTGGGGACCAGGCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 860781 217 - 1291538 CTACAAGGAAAAGCAGACAGCCACATGCAAAAAC-------AGACAGAGCCATCACCCCTGATGGTGCTGAGGTGCTGCCGCATTGGTGCACCCTGG-----GCAGCAAGACCTCAGCTG---TCA--TAgtttaagctactctgagttggttttctgtcacttgcaacccacagccccctggtgattacaGCTTTGAAGAATGAACTGGGCTTCCACAGGTGGGG-CCAGGCAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75792993 218 + 122082543 CCAAGAGGGAAAGAGC-TGACTGAGAGGAAGGAC-------TGACAGAAGCCTCATCACCAGGGATGCTGGAGGGCTGCTCCA--GGT-TACCATGGTGTCTGCAGCAGGACCTTTGC----CTCGGCTGGCGTGAGCTACTTTGAATTGATTTCATGGTACTTGCAGTCCAAAGCCTCTTAGTCATTGCAGCTTTGGGGTCTGCATT--CCCTCTGCACATGGGCAGCAGGTAG i mm10.chr11 C 0 I 129 s canFam3.chr9 15620587 213 - 61074082 ctaagaagaGCAGAGCACAGCCAGGTGGAAAGGG-------GGACAGAACCAGCACCTTTGA-GTTGTTGACGAGCCTGGGCACAAAC-CTCCCTGA----GCATTTGCCATCTCA-CTGTCCTCA--TTGTTTCAGGCACTTTGA----GTTTTTTGTTATTTGCAACCCA-AACATTCTAGTCCTCATAG-TTTGAAGAATGGACTGGGCTTCCACAGGTGGAGGTTGGGTGG i canFam3.chr9 I 1056 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=22977.000000 s hg38.chr17_GL383563v3_alt 117392 11 + 375691 gagagcctctc s panTro4.chr17 115400 11 + 82630442 GAGAGCCTCTC i panTro4.chr17 C 0 M 568 s ponAbe2.chr17 13500 11 + 73212453 gagagcatctc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 44047 11 + 80904711 GAGAGCAACTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 43385 11 + 80997621 GAGAGCAACTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 55201 11 + 74645514 GAGAGCAACTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 46344 11 + 75148670 GAGAGCAACTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 860998 11 - 1291538 GAGAGCATCCC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15620800 9 - 61074082 GAGAGCATg-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75793211 129 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I a score=313802.000000 s hg38.chr17_GL383563v3_alt 117403 177 + 375691 aggtaggggcagcgtgtgGGGTG-TGTGGCCCACGGCCCACCTGGAGGGCAGCACGCCACAG-------------AGGCCACCCTA-GGAGAACTGGCAGGGCCGACACTGGGTCCTGCTCCTCATTGGGACATTCACTGCCTTTCCTCCCTGTCATCGCCCCTCTTCGAGATCTGCTGGGAACATGCGAGT s ponAbe2.chr17 13511 177 + 73212453 aggtaggggcagtgtgtgGGGTG-TGTGGCCCACAGCCCACCTGGAGAGCAGCACGCCACAG-------------AGGCCACCCTA-GGAGAACTGGCAGGGCCGACACTGGGTCCCGCTCCTCATTGGGACATTCACTGCCTTTCCTCCCTGTCATTGCCCCTCTGTGAGATCTGCTGGGAACATGCGAGT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 44058 174 + 80904711 ACACAGGGGCAGCGTGTGGTGTG-TGGGGCCCACGGCCCACCTGGAGGGCAGCACGCCACAG-------------AGGCCATCCTA-GGAGAACTGGCAGGGCAGACACCAGGTCCTG---CTCATTAGGACATTCACTGCCTTTCCTCCATGTCATCGCCCCTCTGCGAGATCTGCTGGGAACATGTGAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 43396 174 + 80997621 ACGCAGGGGCAGCGTGTGGTGTG-TGGGGCCCACGGCCCACCTGGAGGGCAGCACGCCACAG-------------AGGCCATCCTA-GGAGAACTGGCAGGGCAGACACCAGGTCCTG---CTCATTAGGACATTCACTGCCTTTCCTCCATGTCATCGCCCCTCTGCGAGATCTGCTGGGAACATGTGAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 55212 174 + 74645514 AGGTAGGGGCAGCGTGTGGTGTG-TGGAGCCCACGGCCCACCTGGAGGGCAGCACGCCACAG-------------AGGCCATCCTA-GGAGAACTGGCAGGGCGGACACCGGGTCCCG---CTCATTAGGACATTCACTGCCTTTCCTCCCTGTCATCGCCCCTCTGCGAGATCTGCTGGGAACACGTGAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 46355 174 + 75148670 AGGTAGGGGCAGCGCGTGGTGTG-TGGGGCCCACGGCCCACCTGGAGGGCAGCACGCCACAG-------------AGGCCATCCTA-GGAGAACTAGCAGGGCAGACACCAGGTCCCG---CTCATTAGGACATTCACTGCCTTTCCTCCCTGTCATCGCCCCTCTGCGAGATCTGCTGGGAACATGTGAGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 861009 175 - 1291538 AGGTA-AGGCAGTGTGTGGTTTG--AGGGCCCAGGGCCCGCCTGGAGGGCAGCGCACTGGAG-------------AGGCCATCCTA-GGAGAACTGGCAGGGTGGTGACCAGGTCCTGTTGCTCCCTCAGACATTTGCCGCCTTTCCTCCCTGTCATCACCCCTCTGAGAGATCTGCTGGGAACATATGAGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15620809 180 - 61074082 gggaggggggagggggaggggggaggggggggAGAACCTGACTGGGGGGCAGCAGGCAGTGGAGTCCACTGGGCCAGGCCACACTAGGGACCAGTGGGAGGAAGGACACTT----------CTCACCCCAATGTTCACTGCCTTTTCTCCCTATCATGGCCCCTATT--AGATCAGTCTGGAACATGTGAAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75793211 129 + 122082543 I e nomLeu3.chr19 81496740 0 + 81552678 I e panTro4.chr17 115411 568 + 82630442 M a score=275224.000000 s hg38.chr17_GL383563v3_alt 117580 111 + 375691 TATGTGCTTGTGCTTTGACATG-------------ACTTAAT----------AAAGAAAGGGCTTTAAAAAGCC-AGGAGAAAA-GGCTGAGTAAATAAACAGCACTTCACTCTCTGCCTTGGACAACAGAGCAAC s ponAbe2.chr17 13688 111 + 73212453 TGTGTGCTTGTGCTTTGACATG-------------ACTTAAT----------AAAGGAAGGGCTTTAAAGAGCC-AGGAGAAAA-GGCTGAGTAAATAAACAGCACTTCACTCTCTGCCTTGGACAACAGAGCAAC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 44232 111 + 80904711 TGTGTGCTTGTGCTTTGACATG-------------ACTTAAT----------AAAGGAAGGGCTTTAAAGAGCC-AGGAGAAAA-GGCTGAGTAAATAAACAGCACTTCACTCTCTGCCTTGGACAACAGAGCAAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 43570 111 + 80997621 TGTGTGCTTGTGCTTCGACATG-------------ACTTAAT----------AAAGGAAGAGCTTTAAAGAGCC-AGGAGAAAA-GGCTGAGTAAATAAACAGCACTTCACTCTCTGCCTTGGACAACAGAGCAAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 55386 109 + 74645514 TGTGTGCTTGTGCTTTGACATG-------------ACTTAAT----------AAAGGAAGGGCTTTAAAGAGCC-AGGAGAAAA-GGCTGAGTAAATAAACAGCACTTCA--CTCTGCCTTGGACAACAGAGCAAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 46529 111 + 75148670 TGTGTGCTTGTGCTTTGACATG-------------ACTTAAT----------AAAGGAAGGGCTTTAAAGAGCC-AGGAGAAAA-GGCTCAGTAAATAAACAGCACTTCACTCTCTGCCTTGGACAACAGAGCAAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 861184 111 - 1291538 TGTGTGCTTGCGCTCTGATATG-------------ACTTAAT----------AAAGGAAGGGCTTTAAAGAGCC-GGGAGAAAA-GGCTGAGCAAATAAACAGCACTTCACTCTCCGCCTTGGACAACAGAGCAAC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75793340 130 + 122082543 tgtgtgtgtgtgtgtTCATGTGCCCATACTTGCATACTTTGTAGTGACAGGCAAGGGAGGGGCTTTAAAGA-----GGAGAACATGGCTAAGCAAACAGGCTGTTTTTGCGCCTCTG-CTTGGACAACAGAGCAAC i mm10.chr11 I 129 C 0 s canFam3.chr9 15620989 111 - 61074082 TTCGTGCTTGTGTCTTGAGGTG-------------ACTTAAT----------AAAGCATAGGCTTTAAAGAGAAGGGGAAAAAA-GGCTGAATAAATAAACAGCACTTCATTCTCAG-CTTGGACAACAGAGCAAC i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I e panTro4.chr17 115411 568 + 82630442 M a score=3412148.000000 s hg38.chr17_GL383563v3_alt 117691 1266 + 375691 CGCCCTCATTTCTTTTTGTCAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCTGGCTAAAGCCGTAATGAACCATCTGGCTTGAATCATTGAGGCTTATTCTAAG-GATCTGGTTGTCACAGCCCAGAGGGGGGCACCGCCTGGGGTACTGGGTGGAAGGCAGTCCCACCCCAGAACCTGTTCCCCCACCATGGACAAGAGCCAAGATTTCTGGGCTTCTGGGCCTAGGATGTTTG-TCAGCCTCCCATAGGATCCAAGCCTAGGGTGGGGCCCCCCTCGAAGGGGGCGACAGGGGCCCAAGCTGGCCCTAGCTCAGTGGCACACCGTCCTCCTTAGCTC------CTCTGAGCCCGTCTTCAGCATTTCTTTGGCATGTCCTGATAATACGGGTGTGGCCAGCCCACAGTTC-AAGCTGGCAAAGCTGCATCCAGCTCTGCCCTGCACTGCTGACCTCATGTGAGTCTGGCCCCTGCACCG---CATGT-A-----TCTCAGGCCAGGGGCCCAGCCCTG----------------------CTG------CCAGGACA-TGCTCCCTGAAGGG----CTG-------CTGAGCTGATGGATTGGAGATGGGGCTGGCTGGCCTGAGTTTCTAGCTTCCTGGTC---CCCTCCTTGCTTTGTGGGTTCagagacagc---aaaaaaaaaaaaaaaaagaaaaagaaaaaGCC-----------TCT-------TGGCCATTCGCCATGCAGAGGGCCCTCTGTGGCACCAGGAGGGTGGCCT------------GAAGCTCTGCC-----------CTCCCCTCTTACTTCCTTGGTGCAGCAGCAGAG---ATGCCAGAAATGGGAACAACTTTCCCATCCGTTCTTCTGGGGGAGGCTTTGGATTCAGGGCAGCCAAAGCAGTTACTTG-GGTCCCACTCAGGGCCCACCCAGGGGATCACCAAGTCCA-GGGTGAGCTTCGCACAGGGTGCCAGGGGCAGAGGGGAGGGGGGGTGGATCTAGGGCACAGCCCTGAGGGC---AAAAAACTCTTCCGACCCAATCT-CCCCAAGCTGGCAGGAAAGTGGAGGGACAAGACTGCTCCCCAGCCCCCACGCCCCAGGGCAGGGCCTTCATGTGCCAGGCGCTGGCCCGAGGGCCGTGGTCCAGGCCTCTAGAAAGTGCAAAGCAGGCAGTTT-CCCCT---------ACAGGGGCCCTGCTCTAACCGGC-CACTGCTGATGGGCCTCCCCAGGTGGGGCGAT-GGGGGG---TC-----TGTGCCCC-G------GG-GGCACTGGTAATCCCTACCTTCAGCTTCTGGTGGCACATTTGATGCTT-GGGAAACTCCAGGCCCGCAGCCCACAGGCCCTGGTGA s panTro4.chr17 115985 1269 + 82630442 CGCCCTCATTTCTTTTTGTCAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCTGGCTAAAGCCGTAATGAACCATCTGGCTTGAATCATTGAGGCTTATTCTAGG-GATCTGGTTGTCACAGCCCAGAGGGGGGCACCGCCTGGGGTACTGGGTGGAAGGCAGTCCCACCCCAGAACCTGTTCCCCCACCATGGACAAGAGCCAAGATTTCTGGGCTCCTGTGCCTAGGATGTTTG-TCAGCCTCCCATAGGATCCAAGCCTAGGGTGGGGCCCCCCTCGAAGGGGGCGACAGGGGCCCAAGCTGGCCCTAGCTCAGTGGCACACCGTCCTCCTTAGCTC------CTCTGAGCCCGTTTTCAGCATTTCTTTGGCATGTCCTGATAATACGGGTGTGGCCAGCCCACAGTTC-AAGCTGGCAAAGCTGCATTCAGCTCTGCCCTGCACTGCTGACCCCATGTGAGTCTGGCCCCTGCACCG---CATGT-A-----TCTCAGGCCAGGGGCCCAGCCCTG----------------------CTG------CCAGGACA-TGCTCCCTGAAGGG----CTG-------CTGAGCTGATGGATTGGAGATGGGGCTGGCTGGCCTGAGTCTCTAGCTTCCTGGTC---CCCTCCTTGCTTTGTGGGTTCAGAGACAGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGCC-----------TCT-------TGGCCATTCGCCATGCAGAGGGCCCTCTGTGGCACCAGGAGGGTGGCCT------------GAAGCTCTGCC-----------CTCCCCTCTTACTTCCTTGGTGCAGCAGCAGAG---ATGCCGGAAATGGGAACAACTTTCCCATCCGTTCTTCTGGGGGAGGCTTTGGATTCAGGGCAGCCAAAGCAGTGACTTG-GGTCCCACTCAGGGCCCACCCAGGGGATCACCAAGTCCA-GGGTGAGCTTCGCACAGGGTGCCAGGGGCAGAGGGGA-GGGGGGTGGATCTAGGGCACAGCCCTGAGGGC---AAAAAACTCTTCCGACCCAATTT-CCCCAAGCTGGCAGGAAAGTGGAGGGACAAGACTGCTCCCCAGCCCCCACGCCCCAGGGCAGGGCCTTCATATGCCAGGCGCTGGCCCGAGGGCCGTGGTCCAGGCCTCTAGAAAGTGCAAAGCAGGCAGTTT-CCCCT---------ACAGGGGCCCTGCTCTAACCGGC-CACTGCTAATGGGCCTCCCCAGGTGGGGCGATGGGGGGG---TC-----TGTGCCCC-G------GG-GGCACTGGTAATCCCTACCTTCAGCTTCCGGTGGCACATTTGATGCTT-GGGAAACTCCAGGCCCGCAGCCCACAAGCCCTGGTGA i panTro4.chr17 M 568 M 1189 s ponAbe2.chr17 13799 1264 + 73212453 CGCCCTCATTTCTTTTTGTCAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCTGGCTAAAGCCATAATGAACCATCTGGCTTGAATCATTTAGGCTTATTCTAGG-GATCTGGTTGTCACAGCCCAGAGGGGGGCACGGCCTGGGGTACTGGGTGGAAGGCAGTCCCACCCCAGAACCTGTTCCCCCACCATGGACAAGAGCCAAGATTTCTGGGCTCCTGTGCCTAGGATGTTTG-TCAGCCTCCCATAGGATCCAAGCCTAGGGTGGGGCCCCCCTCGAAGGGGGCGACAGGGGCCCAAGCTGGCCCTAGCTCAGTGGCACACCGTCCTCCTTAGCTC------CTCTGAGCCCATTTTCAGAATTTCTTTGGCGTGTCCTGGTAATATGGGTGTGGCCAGCCCACAATTC-AAGCTGGTAAAGCTGCATCCAGCTCTGCCCTGCACTGCTGACCCCATGTGAGTCTGGCCCCTGTACGG---CATGT-A-----TCTCAGGCCAGGGACCCAGCCCTG----------------------CTG------CCAGGACA-TGCTCCGTGAACGG----CTG-------CTGAGCTGATGGATTGGAGATGGGGCTGGCTGGCCTGAGTTTCTAGCTTCCTGGTC---CCCTCCTTGCTTTGTGGGTTCAGAGacaac-------aacaacaacaacaacaaaacaaAAAGCC-----------TCT-------TGGCCATTCGCCATCCAGAGGGGCCTCTGTGGCACCAGGAGGGTGGCCT------------GAAGCTCTGCC-----------CTCCCCTCTTACTTCCTTAGTGCAGCAGCAGAG---ATGCCGGAAATGGGAACAACTTTCCCATCCGTTCTTCTGGGGGAGGCTTTGGATTCAGGGCAGCCAAAGCAGTGACTTG-GGTCCCACTCAGGGACTACCCAGGGGATCAGCAAGTCCG-GGGTGAGCTTCGCACAGGGTGCCAGGAGCAGAGGGGA-GAGGGATGGATCCAGGGCACAGCCCTGAGGGC---AAAAAATTCTTCCGACCCAATTTCCCCCAAGCTGGCAGGAAAGTGGAGGGACAAGACTGCTCCCCAGCCCCCACGCCCCAGGGCAGGGCCTTCATATGCCAGGCGCTGGCCCGAGGGCCGTTGTCCAGGCCTCGAGAAAGTGCATAGCAAGCAGTTT-CCCCT---------ACAGGGGCCCTGCTCTAACCGGC-CACTGCTGATGGGCCTCCCCATGTGGGGCGATGGGGGGG---TC-----TGTGCCCAGG------GG-GGCACTGGTATTCCCTACCTTCAGCTTCTGGTGGCACATCTGATGCTT-GGGAAACTCCAGGCCCGCAGCCCACAGGCCCCGGTGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 44343 1240 + 80904711 CGCCCTCATTTCTTTTTGTCAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCTGGCTAAAGCCATAATGAACCATCTGGCTTGAATCACTTAGGCTTATTCTAGG-GATCTGGTTGTCACAGCCCAGAGGGGGGCACGGCCTGGGGTACTGGGTGGAAGGCAGTCCCACCCCAGAACCTGTTCCCCCACCACGGACGAGAGCCAAGATTTCTGGGCTCCTGTGCCTAGGATATTTGCTCAGCCTCCCATAGGATCCAAGCCTGGGGTGGGGCACCCCTTGAAGGGGGCGACAGGGGCCCACGCAGGCCCTGGCTCGGTGGCACACCGTCCTCCTTAGCTC------CTCTGAGCCCGTTTTTAGCATTTCTTTGGCGTGTCCTGGTAATACGGGTGTGGCCAGCCCACAGTTC-AAGCTGGCAAAGCTGCG-CCAGCTCTGCCCTGCACTGCTGACCCCATGTGAGTCTGGCCCCTGCATGG---CATGT-A-----TCTAAGGCCAGGGACCCAGCACTG----------------------CTG------CCAGGACA-TGCTCCGCCAAGGG----CTG-------CTGAGTCGATGAATTGGACATGGGGCCGGCTGGCCTGAGTTTCGAGCTTCCTGGTC---CCCTCCTTGCTTTGTGCGTTCAGAGACAG------------------AAAAAAAAAAAAAAAGTC-----------TCT-------TGGCCATTCGCTATCCAGAGGGCCCTCTGTGGAACCAGGAGGGTGGCCT------------GAAGCTCTGCC-----------CTCCCCTCTTACTTCCTGGGTGCAGTGGCAGTG---ATGCCGGAAATGGGAACAAGTTTCCCATCCCTTCTTCTGGGGGAGGCTTTGGATTCAGGCCAGCCAAACGAGTGG---------CCACTTAGGGCCTGCCCAGGGGCTCAGCAAGTCCG-GGGTGAGCTTTGCACAGGGTGCCAGGAGCAGAGGGGA--GGGGGTGGATCTAGGGCACAGCCCTGAGGGC---AAAAAACTCTTCCGACCCAATTT-CCCCAAGCTGGCAGGAAAGTGGAGGGACAAGACGGCTCCCCAGCCCCTACACCCCAGGGCAGGGCCTTCATATGCCAGGCGCTGGCCCGACGGCCGTGGTCCAAGCCTCGAAAAAGTACCTGGCAGGCAGTTT--CCCT---------ACAGGGGCCCTGCTCTAACCGGC-CACTGCTGATGGGCCTCCCCAGGTGCAGCGAT-GGGGGG---TC-----TCCACCCC-G------GG-GGCACTGGTAATCCCTACCTTCAGCTTCTGCTGGCACATTTGATGCTT-GGGAAACTCCAGACCCGCAGCCCACAGGCCCTGGTGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 43681 1241 + 80997621 CGCCCTCATTTCTTTTTGTCAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCTGGCTAAAGCCATAATGAACCATCTGGCTTGAATCACTTAGGCTTATTCTAGG-GATCTGGTTGTCACAGCCCAGAGGGGGGCACGGCCTGGGGTACTGGGTGGAAGGCAGTCCCACCCCAGAACCTGTTCCCCCACCACGGACGAGAGCCAAGATTTCTGGGCTCCTGTGCCTAGGATATTTGCTCAGCCTCCCATAGGATCCAAGCCTGGGGTGGGGCACCCCTTGAAGGGGGCGACAGGGGCCCACGCAGGCCCTGGCTCGGTGGCACACCGTCCTCCTTAGCTC------CTCTGAGCCCGTTTTTAGCATTTCTTTGGCGTGTCCTGGTAATACGGGTGTGGCCAGCCCACAGTTC-AAGCTGGCAAAGCTGCGTCCAGCTCTGCCCTGCACTGCTGACCCCATGTGAGTCTGGCCCCTGCATGG---CATGT-A-----TCTGAGGCCAGGGACCCAGCACTG----------------------CTG------CCAGGACA-TGCTCCCCCAAGGG----CTG-------CTGAGTCGATGAATTGGACATGGGGCCGGCTGGCCTGAGTTTCGAGCTTCCTGGTC---CCCTTCTTGCTTTGTGGGTTCAGAGACAG------------------AAAAAAAAAAAAAAAGTC-----------TCT-------TGGCCATTCGCTATCCAGAGGGCCCTCTGTGGAACCAGGAGGGTGGCCT------------GAAGCTCTGCC-----------CTCCCCTCTTACTTCCTGGGTGCAGTGGCAGTG---ATGCCGGAAATGGGAACAAGTTTCCCATCCCTTCTTCTGGGGGAGGCTTTGGATTCAGGCCAGCCAAACGAGTGG---------CCACTTAGGGCCTGCCCAGAGGCTCAGCAAGTCCG-GGGTGAGCTTTGCACAGGGTGCCAGGAGCAGAGGGGA--GGGGGTGGATTTAGGGCACAGCCCTGAGGGC---AAAAAACTCTTCCGACCCAATTT-CCCCAAGCTGGCAGGAAAGTGGAGGGACAAGACGGCTCCCCAGCCCCTACACCCCAGGGCAGGGCCTTCATATGCCAGGCGCTGGCCCGAGGGCCGTGGTCCAAGCCTCGAAAAAGTACCTGGCAGGCAGTTT--CCCT---------ACAGGGGCCCTGCTCTAACCGGC-CACTGCTGATGGGCCTCCCCAGGTGCAGCGAT-GGGGGG---TC-----TCCACCCC-G------GG-GGCACTGGTAATCCCTACCTTCAGCTTCTGCTGGCACATTTGATGCTT-GGGAAACTCCAGACCCGCAGCCCACAGGCCCTGGTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 55495 1242 + 74645514 CgacctcatttctttttgtcaGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCTGGCTAAAGCCATAATGAACCATCTGGCTTGAATCACTTAGGCTTATTCTAGG-GATCTGGTTGTCACAGCCCAGAGGGGGGCACGGCCTGGGGTACTGGGTGGAACGCAGTCCCACCCCAGACCCTGTTCCCCCACCACGGACGAGAGCCAAGATTTCTGGGCTCCTGTGCCTAGGATATTTGCTCAGCCTCCCATAGGATCCAAGCCTGGGGTGGGGCACCCCTTGAAGGGGGCGACAGGGGCCCACGCAGGCCCTGGCTCAGTGGCACACCGTCCTCCTTAGCTC------CTCTGAGCCCGTTTTTAGCATTTCTTTGGCGTGTCCTGGTAATACGGGTGTGGCCAGCCCACTGGACGAAGCTGGCAAAGCTGCGTCCAGCTCTGCCCTGCACCGCTGACCCCATGTGAGTCTGGCCCCTGCATGG---CATGT-A-----TCTGAGGCCAGGGACCCAGCACTG----------------------CTG------CCAGGACA-TGCTCCGCCAAGGG----CTG-------CTGAGTTGATGAATTGGACATGGGGCCGGCTGGCCTGAGTTTCGAGCTTCCTGGTC---CCCTCCTTGCTTTGTGGgttcagagacaga-----------------aaaaaaaaaaaaaaagtc-----------tct-------tggCCATTCGCTATCCAGAGGGCCCTCTGTGGAACCAGGAGGGTGGCCT------------GAAGCTCTGCC-----------CTCCCCTCTTACTTCCTTGGTGCAGTGGCAGTG---ATGCCAGAAATGGGAACAAGTTTCCCATCCCTTCTTCTGGGGGAGGCTTTGGATTCAGGCCAGCCAAACGAGTGG---------CCACTTAGGGCCTGCCCAGAGGCTCAGCAAGTCCG-GGGTGAGCTTTGCACAGGGcgccaggagcagagggga--gggggTGGATCTAGGGCACAGCCCTGAGGGC----AAAAACTCTTCCGACCCGATTT-CCCCAAGCTGGCAGGAAAGTGGAGGGACAAGACGGCTCCCCAGCCCCCACACCCCAGGGCAGGGCCTTCATATGCCAGGCGCTGGCCCGAGGGCCGTGGTCCAAGCCTCGAAAAAGTGCCTGGCAGGCAGTTT--CCCT---------ACAGCGGCCCTGCTCTAACCGGC-TACTGCTGATGGGCCTCCCCAGGTGCAGCGAT-GGGGGG---TC-----TCCACCCC-G------GG-GGCACTGGTAATCCCTACCTTCAGCTTCTGCTGGCACATTTGATGCTT-GGGAAACTCCAGGCCCGCAGCCCACAGGCCCTGGTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 46640 1239 + 75148670 CGCCCTCATTTCTTTTTGTCAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCTGGCTAAAGCCATAATGAACCATCTGGCTTGAATCACTTAGGCTTATTCTAGG-GATCTGGTTGTCACAGCCCAGAGGGGGGCACAGCCTGGGGTACTGGGTGGAAGGCAGTCCCACCCCAGACCCTGTTCCCCCACCACGGACGAGAGCCAAGATTTCTGGGCTCCTGTGCCTAGGATATTTGCTCAGCCCCCCACAGGATCCAAGCCTGGGGTGGGGCACCCCTTGAAGGGGGCAACAGGGGCCCACACAGGCCCTGGCTCGGTGGCACACCGTCCTCCTTAGCTC------CTCTGAGCCCGTTTTTAGCATTTCTTTGGCGTGTCCTGGTAATACGGGTGTGGCCAGCCCACAGTTC-AAGCTGGCAAAGCTGCGTCCAGCTCTGCCCTGCACTGCTGACCCCATGTGAGTGTGGCCCCTGCATGG---CATGT-A-----TCTGAGGCCAGGGACCCAGCATT-----------------------CTG------CCAGGACA-CGCTCCGCGAAGGG----CTG-------CTGAGTTGATGAATTGGACAAGGGGCTGGCTGGCCTGAGTTTCGAGCTTCCTGGTC---CCCTCCTTGCTTTGTGGGTTCAGAGACAG---------------------------AAAAAAGTC-----------TCT-------TGGCCATTCGCTATCTAGAGGGTCCTCTGTGGAACCAGGAGGGTGGCCG------------GAAGCTCTGCC-----------CTCCCCTCTTACTTCCTTGGTGCAGCCGCAGTG---ATGAAGGAAATGGGAACAAGTTTCCCATCCTTTCATCTGGGGGAGGCTTTGGATTCAGGGCAGCCAAACGAGTGACTTG-GGTCCCACTTAGGGCCTGCCCAGAGGCTCAGCAAGTCCG-GGGTGAGCTTTGCCCAGGGCGCCAGGAGCAGAGGGCA--GGGGGTGGATCTAGGGCACAGCCCTGAGGGC---AAAAAACTCTTCCGACCCAATTT-CCCCAGGCTGGCAGGAAAGTGGAGGGACAAGACGGCTCCCCAGCCCCCACACCCCAGGGCAGGGCCTTCATATGCCAGGCGCTGGCCTGAGGGCCGTGGTCCAAGCCTCG--AAAGTGCCTGGCAGGCAGTTTCCCCCT---------ACAGGGGCCCTGCTCTAACCGGC-CACTGCTGATGGACCTCCCCAGGTGGAGCGAT-GGGGGG---TC-----TCCGCCCC-G------GG-GGCACTGGGAATCCCTACCTTCAGCTTCTGCTAGCACATTTGATGCTT-GGGAAACTCCAGGCCCGCAGCCCACAGGCCCTGGTGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 861295 1264 - 1291538 CGCCCTCATTTCTTCTTGTCAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCGGGCTAAAGCCATAATGAACCATCTGGCTTGAATCATTTAGGCTTATTCTAGG-GATCTGGTTGTCACAGCCCAGAGGGGGGCATGGCCTGGGGTACTGAGTGGAAGGCGGTCCCACCCCAGAACCTGTTTGCCCACCATGGACAAGAGCCAAGAGTTCTGGGCTCACGTGCCTAGGATGTTTGCTCAGCCTCCAGCACGATCCAAGCCT-GGGTGGGGCACCCTTTAAAGGGGGCAACAGTGGCCCAAGCTGGCCCTGGCTCTGTGGCACACCATCCTCCTTAGCTC------TTCTGAGTCTGTTTTCAGCATTTGTTTGGTGTGTCCTGGTAATACGGGTAT-----GCACGAAGTGG-AAGTTGGCAAAGCTGGGTCCGGCTCTGCCCTGCACTGGTGACCCTATGTGAGTCTGGCCCCCGCGCGG---CATGT-A-----TCTGAGGCCAGGGACCCAGCCCCA----------------------CTG------CCAGGACA-TGCTCCAAGAAGGG----CTG-------CTGAGCTGACAGACTGGAGGTGGGGCTGGCTGGCCTGAGTTTTGAGATTTCCCATC---CCCTCCTTGCCTTGTGGGTT-AGAGCTAGC-----------------CAAAAAAAAAAAAATGCCAGCTATTCACATCT-------TGGCCATTTGCCATCCAGAGGGCCCTGTGTGGCACGAGGATCGGGGACT------------AAAGCTTTGCC-----------CTCACGTCTCACTTCCTTGGTGCAGCATTGGAG---ATATCGGAAATGGGAACAACCTTCACGCCCCTTCTTCTAGGGGAGGCTTTGGATTCAGGCCAGCAGAAGGAGAGACCTG-GATCCCACTTAGGGCCTACCCAAGGGCTCAGCAAGTCTG-GGGTGAGCTTCCCACAGGGTTCCGGGAGCAGAGAGGA-GGGGCCTGGATCTAGGGCACAGCCCTGAGGGC---AAAACACTCTCGCAACCCAATTT-CTCCAAGCTGGCAGGAAAGTGGAGGGGCAAGACTGCTCCCCAGCCCCTACGCCCCAGGGCAGGGCCTCCATATGCCAGGCGCTGGCCCGAGGGCCGCGGTCCAGGCCTCGAGAAAGTGCATAGTGGGCAGTTT--CCCT---------ACAGCGGCCCAGCTCTAATGGGC-CACTGCTGATGGGCCTCCCCAGGTGGGGCAAT-GGGGGGGAATC-----TGCGCTCC-GGGGTGAGG-GGCACTGGTAATTCCCACCTTCATCTTCTGGTGGCACATTTGATGTGT-GGGAAACTCCAGGCCCGCAGCCCGCAGGCCCTGGTAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75793470 1113 + 122082543 CGCCCTCATTTCTTTTTGTCCGAAC--AGATAATCCAATAATTAGAGCAGCAAATAGCATAACCCTGGCTAAAGCCATAATGAACCATCTGGCTTGAATCACTTAGGCTTATTCTAAGAGATCTGGTTGTCAGAGCTCAGA-GGGTGCACAGCCTTGGGTGCCAGGTACAGGGTGGTCCTGCTCAGG-----GTCTCCTCACC---TGTGAGAGCTACAATCCTCGTGCTC-------------------TTAGCC-CCAATGAGAT---------------------------------------------------------GCCCAGCTTCATACCCACTTCC-CGGCTCTGCAAGCTCCAGGCCTCTTCTCCACACTTG-TTAGTGTAGCATAGTCGTCTGGGTGTGGCCAGCCCCCAGTTT-CAGTTGAGAAAGCTGTATCTAG-------------GATCCAACTCATGTGAACCTGTCTCCAGGGAGGACACCTGTGG-----CCTGAGCCCAGGGACACAGCATGGTT--------------------CTGTTTGCCCCACTCCC-AGCTGTTCAAAGAGTGTCCTGAAAACACCGGAGTTGACAGACAGGAGGTGGGGCT-TCTGGCTT--GCTTTATTCTTTCTGGTG---GGTTTCCTCC------------------------------------------------------C-----------TCT-------TGGTCTTATGTCATCCCTTGAG-CTGCTATGGCACCTGGAGAGTGGCCT------------GTGGCTCAGGCACAATCTTTGTCCACCTGCTCACTCCCT-----CACCTGCAGAGAGAATGCTGGAAATGGGAATCACTT--CTATCCTCTCTTCCCAGGATGACTCTGGATCCC------CCAAGGGGGCTAACTGTGGTCTTACTTAGAGCCTCCCTAGAGGG-CAGCCAGCCTG-----GATCCTTGCACAGAGTGCCAGGAATTGGGCAGA----AAGTAAATCCAGGGCGCAGCTCTGAAGATTTTAATAAATTCAGCCCACCTAGTTT-CCCTCAACCTGCAGGACAGCAGAGGGCAAGGCCTGCTCCCCAGCCTTTATGCTTGTGGGTAGGTTCTCCATATGCCCTGAGTTAG----------GGGGTCCAGGTCT--AGAACGCACACAAAAGGCAGTGT--TCC---------------AGCTCAGGCTTGATCCAC-CTCTGTTGATGGGCTCTCTAAAGTG-AACAGT---GGAG---TC-----TGTTCCCA-G------GGTGACACTGTGAACTCCCATCCTTAGCGTCCAGAGGCACATGGTATGCTG-GGGAACAGTCAGCCCC-TAGCCCAGAGGCCCTGGGGA i mm10.chr11 C 0 C 0 s canFam3.chr9 15621100 1248 - 61074082 CGCCCTAATTTCTTTTTGTTAGAACAGAGATAATCCAATAATTAGGGCAGCAAATAGCATAACCCCGGCTAAAGCCATAATGAACCATCTGGCTTAAATCATTTAGGCTAATTCTAGG-GATCTGGTTGTCAGAGCC--GAGAGGGGTCCAGGCCAGGGTATGGGCTGGAGAGTGGTCCCACCCCAGAACCCGGT--CCCACCACAGGAAGGAGCCAAGATTTCTGTGTCCCCATGCCTGGGAAGTCTGCTCGGCCACTGATGAGATCCAAGCCTGGGGTGGGCTGTTCCTTGAAGGGGACA--AGTGACCCAAGCTGGCCCAGGCTCAGCCACAAGCC-TCCTCCTTAGCTT-----------------TTTTCAGGAGACC---------ACCCGGTGATATGGGTGTGGCCAGCCCACCATCC-AGACTGGCCAGGCTGTG------------------------ACTCATGTGAATCTGTCCCCTGCTAGG--ACATGT-GAGCTCCCTGGGTGGTGAGACCCACTCCTGTTCCCCTTTGCCACACTCTCTGCTG------CTGGGACAGTGCTCAGTGGAGAA----CTG---------GAGTCGATGGGCTGGAGATGAGGCA-GCTGACCTGCTTTGGGGACTTTCGGGACTGTTCCTCCTCAC-CTGGGGGTTGAGGGAGGGCC----------------TGAAGAAATGACAAGATT-----------TCTCACCCTGTAACAGTGTGTCATCCAGAGGGCCTTTGGTGGCACCAGGAGGGTTGCCTGAAGTTCATGTGGAAGCCCTGCC-----------CTGCCCTCTCACTCCGTTGGCACAGCACGAAAG---ATGTCC-AAAGGGGAACAAGTTCCCTACCC---CTTCTGGAGGTGGCTTTGGATTCAGGGCATCCAAAGGGGTGACTTG-GGTTCCAGTTAGGGCCTGCCCAGATGCATGGAAGGTGAGGGGGTGCGATTTGCCCAGGGTGCGGGGAGCTGGGGGTG----GGGAAGATTCGGGGCACAGCCCTGAGGGC---ATATACTCTCTGCAACCCAATTT-CCCCCAGCTGGCAGGGAAGTGGAGGGAGAGGGCTGCTCCCC-GCCCCCACACCCAGAGGCAAGGCCTCAATACCCCAGGATTCGGCCAGC--------GTCCAGGCCCACAGAAAGTGCACAGGGGACAGTTT--CTCTCCTTGGAGGGCAGAGGACAGGCCTCCTCCAGCTCTCTCCTCCCGGGCCTCCCTCGGTAGGACGCT-GAGAGG---TCGGCCACCTCCCCC-A------GT-GACACTGGTGATCTCCCCCTTCAGCTTCCAGAGACCCACTTTATGCTTGGGGAAACTCCAGGCCCCCGGGCC-TAGGCCCACGGGA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I a score=752618.000000 s hg38.chr17_GL383563v3_alt 118957 441 + 375691 GTGCCCAGGCCAGGCGCAGACATCCCTGCTGCGCAGGGGAGGGGCAGCAC-CAGCCCTGGAGAA------------------------------GGGCCACATCCCGGGAAGGGCTGGGGTTTGACGAGACGCTGG----------TTTTCCAGG--TCTCAGTGACAAGTCTGGAGCCACAGCTGAGCTAG-----GA---------GGGGGT---------------TCTCACATGCCAT-CCCCACCCCGC-GCAAACCGACTCCTCACTGGAC------TGCGACCTCTTCCGGCCTCGGTTTCCCAGCCAGTCCCGGCTCGGGCCGGACAGGCACCCTCGGGGACGGGAAAAGGCGCCAGGAGCGCCCACCGGCCGGGCCTCGGTCCCGGGACTCCGGCGCTTGCCTGCT-CCCGGGGGCTCAGGGCTCAGTCCGGGAGGAGGG-GGAGCGGGCTGGGGGGCCCTCTCTGCCCGGGGGCCGCGGGCGTAACAGGTGGGCGAAGGTGCGCGGCCCTGGC s ponAbe2.chr17 15063 433 + 73212453 GTGCCCAAGCCAGGCGCAGACATCCCTGCTGCGCAGGGGAGGGGCAGCCC-CAGCCC--GGCAA------------------------------GGGCCACATCCCGGGAAGGGCTGGGGTTT-----GACGCTGG----------TTTTCCAGG--TCTCAGTGACGAGTCTGGAGCTACAGCTGGGCTAG-----GA---------GGGGGT---------------TCTCACAT-CCAT-CCCCACCCCGC-GCAAACCGATTCCTCACTGGAC------TGCGACCTCTTCTGGCCTCGGTTTCCCAGCGAGTCCCGGCTCGGGCCGGACAGGCACCCTCGGGGACGGGCAAAGGCGCCAGGAGCGCCCACCGGCCGGGCCTCGGTCCCGGGACTCCGGCGCTTGCCTGCT-CCCAGGGGCTCAGGGCTCAGTCCGGGAGGAGGG-GGAGCGGGCTGGGGGGCCCTCTCTGTCTGGGGGCCACAGGCGTAACAGGTGGGCGAAGGTGCGCGGCCCTGGC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 45583 426 + 80904711 GTGCCCAAGCCAGGCGCAGACACCC---CTGCACAGGGGAGGGGCAACCC-CAGCCCTGGAGAAGCTAGAGCAGGACTCC----TGCCC-----GGGCCACATCCCGGGAAGGGCTGGGGTTT-----GACGCTGG----------TTTTCCAGG--TCTCAGTGGCAAGTCGGGAGCCACAGCTGGGCTAG-----GA---------GGGGGT---------------TCTCACGTCCCAT-CCCCACCCCGC-GCAAACCGGTTCCTCACTGGAC------TGCGACCTCTTCCGGCCTCGGTTTCCCAGCCTGT-CCGGCCCG------------------GTGGATGGGAAAGG---------GCGCCCACCGGCCGGGCCGCGGTCCCGGGACTCCGGCGCTTGCCTGCTCCCCCGGGGCTCAGGGCTCAGTCCGGGAGGA-GG-GGAGCGGGCTGGGAGGCCCTTTCCGCCCGGGGGCCGCGGGCGTAACAGGTGGGCGCAGGTGAGGGGCCCTGGC i rheMac3.chr16 C 0 M 1216 s macFas5.chr16 44922 425 + 80997621 GTGCCCAAGCCAGGCGCAGACACCC---CTGCACAGGGGAGGGGCAGCCC-CAGCCCTGGAGAAGCTAGAGCAGGACTCC----TGCCC-----GGGCCACATCCCGGGAAGGGCTGGGGTTT-----GACGCTGG----------TTTTCCAGG--TCTCAGTGGCAAGTCGGGAGCCACAGCTGGGCTAG-----GA---------GGGGGT---------------TCTCACGTCCCAT-CCCCACCCCGC-GCAAACCGGTTCCTCACTGGAC------TGCGACCTCTTCCGGCCTCGGTTTCCCAGCCTGT-CCGGCCCG------------------GTGGATGGGAAAGG---------GCGCCCACCGGCCGGGCCTCGGTCCCGGGACTCCGGCGCTTGCCTGCT-CCCCGGGGCTCAGGGCTCAGTCCGGGAGGA-GG-GGAGCGGGCTGGGAGGCCCTTTCCGCCCGGGGGCCGCGGGCGTAACAGGTGGGCGCAGGTGCGCGGCCCTGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 56737 434 + 74645514 GTGCCCAAGCCAGGCGCAGACACCC---CTGCACAGGGGAGGggcagccc-cagccctggagAAGCTGGAGCAGGACTCC----TGCCC-----GGGCCACATCCCGGGAAGGGCTGGGGTTT-----GACGCTGG----------TTTTCCAGG--TCTCAGTGGCAAGTCGGGAGCCACAGCTGGGCTAG-----AA---------GGGGGT---------------TCTCACATCCCGT-CCCCACCCCGC-GCACACCGGTTCCTCACTGGAC------TGCGACCTCTTCCGGCCTCGGTTTCCCAGCCTGT-CCGGCCCG------------------GTGGATGGGAAAGGGCGCCAGGAGCGCCCACCGGCCGGGCCTCGGTCCCGGGACTCCGGCGCTTGCCTGCT-CCCCGGGGCTCAGGGCTCAGTCCGGGAGGA-GG-GGAGCGGGCTGGGAGGCCCTTTCTGCCCGGGGGCCGCGGGCGTAACAGGTGGGCGCAGGTGCGCGGCCCTGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 47879 422 + 75148670 GTGCCCAAGCCAGGCGCAGACACCC---CTGCACAGGGGAGGGGCAGCCC-CAGCCCTGGAGAAGCTAGAGCAGGGCTCC----TGCCC-----GGGCCACGTCCCGGGAAGG------------------GCTGG----------TTTTCCAGG--TCTCAGCGGCAAGTCGGGAGCCACAGCTGGGCTAG-----GA---------GGGGTT---------------TCTCACATCCCAT-CCCCACCCCGC-GCAAACCGGTTCCTCACTGGAC------CGCGACCTCTTCCGGCCTCGGTTTCCCAGCCTGT-CCGGCCCG------------------GTGGATGGGAAAGGGCGCCAGGAGCGCCCACCGGCCGGGCCTCGGTCCCGGGACTCCGGCGCCTGCCTGCT-CCCCGGGGCTCAGGGCTCAGTCCGGGAGGAGGG-GGAGCGGGCTGGGAGGCCCTTTCTGCCCGGGGGCCGCGGGCGTAACAGGTGGGCGCAGGTGCACGGCCCTGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 862559 465 - 1291538 GTGCCCAAGCCAGGCACAAACACCCCTGCTATGCAGGAGAGGGCCACCCCGGGGCCCTGGAGAAGCCAGAGCGGGACTCC----TTCTCAACAAGGGCCATATCCCGGGCAGGGCTGGGGTTT-----GACGCTGG----------TTTTCCAGGTCTCTCAGTGACACGGCTGGGGCTAAAGCTGGACTGGGGCAAGG---------GGGGTG---------------TCTCCCATCCCA--CCCTGACCCGC-ACAAAACGATTCCTCACTGGAC------TGCGACCTATTCCAGCCTCGGTTTCCCAGCCAGTCCCGGCTTG-GCCGGACAAGCACCCTCAGAAACAGGAAAAGGCGCCACGAGCGCCCACCCGCCGGGCCTCGGCCCTGGGACTCCGGCGGTTGCCTGCT--CCTGGGGCTCGGGGCTCAGTCCCGGGGGA-GG-CGGGCGGGCTGGGA-GCCCATCCTGCCTTGGGGCAGCACGCGTAACAGGTGTGCGAAGGTCCGCGGCCCTGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75794583 454 + 122082543 ACGCCCAGACAAGGCATAACTACCAATGTTGCACGGAGGAGGGGCTGCTT-TTGCCTTGGGCAAGCTGGGATGGGTCCCCCCAATCCCA-----TGGGCCCATGGCATCTATGACTAGGTTCT-----GAGGCTGGCTTTGTTTTTTTTTTTTTT--TCTAAGTGAAAC----AGGGTGACAGCTGGGCTGG-----GGCCCTTCCATGTAGTC---------------ACCCCAGCCGCAG-CCACAGCCCTCAGCAAA-------TTCACGGGACAGGTGATGTGACTTCTTCCCTCCTTGGCTTCCTGGATGGTCCCTGGTGGGCAGGGTTAGGCATCCTCAGGGACCACACAAGCCACCAGGAGAG------GTCCTGGCCTGGCTCGGGAGACCCTGGTGTCTGTTGTCT-CCCTG-------GGGCTGAGTCCGAGAGGAGGG-GGCGCGGCTGGGGA---CCCTCCTGACCGGGGA-AGCCGGCGTAACAGGTGGGCGAAGGTCCACGGCC----- i mm10.chr11 C 0 C 0 s canFam3.chr9 15622348 410 - 61074082 GCCCGCAAACCAGGCGCGGCCACCC---TCGCGGCGCCGAGCGAC--CCT-CGGCTCAGG-------------------C----CGCGA-----GCGACCCCTGCCCGGAAGGG-Tgcgcccc-----ccggcggg--------------ccggg--------------gaggggggccACAGCGGGGCTGG-----GT---------GGGGCCCAGCGAGCTGCGCTACCTCCCAGCCCCTCCCCCATCCCGC-GCTAACC-----CCTCCCGAAC-----------------CCGGCCTCGGTTTCCCCTCCAGTCCCGGGTCCCGCGGGGCAGGCGCTCTCGGAGACCCGAAAGG---CAAGCAgcgcccgccggcccggcctcgccccgggggccccggcgctcgcccact-gcccggggcccggggcTCAGCCCGGAGAGAGGGCGGCGCGGGCTGGGG-GCCCTTCCCGGACTTGGGAAGCGGGCGTAACAGGTGGGCGAAGGTCCGCG--CCGGG- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81496740 0 + 81552678 I e panTro4.chr17 117254 1189 + 82630442 M a score=29170.000000 s hg38.chr17_GL383563v3_alt 119398 19 + 375691 -GAGGGCTGCGGCGGGGTCC s ponAbe2.chr17 15496 19 + 73212453 -GAGGGCTGCGGCGGGGTCC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 45347 19 + 80997621 -CAGCGCCGCGGCGGGGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 57171 19 + 74645514 -CAGCGCCGCGGCGGGGTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 48301 19 + 75148670 -CAGCGCCGCGGCGGGGTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 863024 19 - 1291538 -GAGCACCGCAGCGGGGTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75795037 16 + 122082543 --AGGGC--CGGCGGGGTCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15622758 19 - 61074082 ACAGCCCC-CGCCGGGGTCC i canFam3.chr9 C 0 M 391 e rheMac3.chr16 46009 1216 + 80904711 M e nomLeu3.chr19 81496740 0 + 81552678 I e panTro4.chr17 117254 1189 + 82630442 M a score=430737.000000 s hg38.chr17_GL383563v3_alt 119417 309 + 375691 ATGGACACCGGAGGAGGAAACGCCAAGGTTTTTCCAAAGGACAAGCGGCCCCGCGGTCCTCCTGGTCCTCTGCTCGCGCGCCAGCAAAGCAGCTGCGCTCTGCGGGCCGCCGGGACCACGCGGGAGGCCGGGCCGCTCCCAGCCTCGGGCCCCTCCCCAGCTCGCCCCAGCCCCGACCCTCGGCCGCGAGGCCCTCCCGGAGCGGCTGGC-----------GAGCGGGGAGCGACCGCGCGGCCGGCAGCAACTGGTGTCTCCCCGGGACGCAGCTCCGCCCTTCCCGGGAACAAAAGCAGCCGCCCGCGCCGGAGCTCC s ponAbe2.chr17 15515 309 + 73212453 ATGGACACCGGAGGAGGAACCGCCAAGGTTTTTCCAAAGGACAAGCGGCCCCGCGGTCCTCCTGGTCCTCGGCCCGCGCGCCAGCAAAGCAGCTGCGCTCTgcgggccgccgggcccacgcgggaggccgggccgcTCCCAGCCTCGGGCCCCTCCCCAGCTCGCCCCAGGCCCGACCCTCGGCCGCGAGGCCCTCCCGGAGCGGCTGGC-----------AAGCGCGGAGCGACCGCGCGGCCGGCAGCAACTGGTGTCTCCCCGGGACGCAGCTCCGCCCTTCCCGGGAACAAAAGCAGCCGCCCGCGCCGGAGCTCC i ponAbe2.chr17 C 0 I 1086 s macFas5.chr16 45366 309 + 80997621 ATGGACACTGGAGGAGGAACCGCCAAGGTTTTTCCAAAGGACAAGCGGCCCCGCGGTCCTCCTGGTCCTCTGCCCGCGCACCGGCAAAGCCGCTGCGCTCTGCGGGCCGCCGGGCCCACGCGGGAGGCCGGGCCGCTCCCAGCCTCGGGCCCCTCCTCAGCCCGCCCCAACCCCGACCCTCGGCCGCGAGGCCCTCCCGGAGCGGCTGGC-----------GAGCGGGGAGCGAGCGCGAGGCCGGCAGCAACTGGTGTCTCCCCGGGACACAGCTCCGCCCTTCCCGGGAACAAAAGCAGCCGCCCGCGCCGGAGCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 57190 284 + 74645514 ATGGACACGGGAGGAGGAACCGCCAAGGTTTTCCCAAAGGACAAGCGGCCCCGCGGTCCTCCCGGTCCTCTGCCCGCGCACCGGCCAA-------------------------GCCCACGCGGGAGGCCGGGCCGCTCCCAGCCTCGGGCCCCTCCTCAGCCCGCCCCAACCCCGACCCTCGGCCGCGAGGCCCTCCCGGAGCGGCTGGC-----------GAGCGGGGAGCGAGCGCGGGGCCGGCAGCAACTGGTGTCTCCCCGGGACACAGCTCCGCCCTTCCCGGGAACAAAAGCAGCCGCCCGCGCCGGAGCCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 48320 309 + 75148670 ATGGACACTGGAGGAGGAACCGCCAAGGTTTTTCCAAAGGACAAGCGGCCCCGCGGTCCTCCTGGTCCTCTGCCCGCGCACCGGCAAAGCCGCTGCGCTCTGCGGGCCGCCGGGCCCACGCGGGAGGCCGGGCCGCTCCCAGCCTCGGGCCCCTCCTCAGCCCGCCCCAACCCCGACCCTCGGCCGCGAGGCCCTCCCGGAGCGGCTGGC-----------GAGCGGGGAGCGAGCGCGAGGCCGGCAGCAACTGGTGTCTCCCCGGGACACAGCTCCGCCCTTCCCGGGAACAAAAGCAGCCGCCCGCGCCGGAGCCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 863043 281 - 1291538 ATGGACA---------------------TTTTTCCAAAGGACAAGCGGCCCCATGGCCCTCCTGGTCCTCAGCCCGCGCGCCAGCAAAGCTGCGGCTCTCTGCAGAAAGCTGGGCCCAC-TGGGAGGCAGGGCCGCTCCCAACCCCGGGCCCCTCCCCGGCTCGCCCCGG-CCCGACCCT-----GCGCCAACCTCCCAGAGCGGTTGGC-----------GAGAGGGGAGTGACCGTGCGGCCCGCAGCAACTAGTGTCTCTCGCGGACGCAGCTCCGCCCTTAACGGAAAAAAAAGCCGCTGCCCGCACCGGAGCTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75795053 280 + 122082543 GCAGATGCGGGAGGAGGAACCGCCAAGGTTTTTCCAAAGGACAAGCGGCCCCGCGG---TCCTGGTTCTCGGCCCGCGCACCAGCAGAGCCGTggcgcggtgcgggccgccgggcccgc------------------cccAGCTACCGCAGGGTCCCCAGCTCTCC-------------------GGGTGGACACCCCGGGACAGCCCGCACAGGGCTCTGGGGCCTGGCGCAACCGCGCGGCCCGCAGCAACTGGTGTCTCTCCGGGGCGCAGCTCCGCCCTTCCCGGGAACAAAAGCCGCCGCCCGCGCAGGAGCTCC i mm10.chr11 C 0 C 0 e canFam3.chr9 15622777 391 - 61074082 M e rheMac3.chr16 46009 1216 + 80904711 M e nomLeu3.chr19 81496740 0 + 81552678 I e panTro4.chr17 117254 1189 + 82630442 M a score=74041.000000 s hg38.chr17_GL383563v3_alt 119726 87 + 375691 GGGAGGGCGGGCTGGCAGGGAGGGGGCGCGGCGCCGGCTCCGAGGAACCCGGCCCCGGAAATGGGACACCCCCAGGGGGTGCCCCCG s macFas5.chr16 45675 87 + 80997621 GGGAGGGCGGGCTGGCAGGGAGGGGGCGCGGCGCCGGCTCCTGGGAACCCGGCCCCGGAAATGGGGCACCCCCAGGGGGTGCCCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 57474 87 + 74645514 GGGAGGGCGGGCTGGCAGGGAGGGGGCGCGGCGCCGGCTCCCGGGAACCCGGCCCCGGAAATGGGACACCCCCAGGGGCTGCCCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 48629 85 + 75148670 GGGAGGGCGGGCT-GCAGGGAGGGGGCGCGGCGCCGGCTCCTGGGAACCCGGCCCCGGAAATGGGACACCCCC-GGGGGTGCCCCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 863324 70 - 1291538 CGGAGGGCAGGTGGGCAGGGAgggggcgcgg----------------cccggccccggAAACGGGATGCCATG-GGGGAGGCCCCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75795333 82 + 122082543 ----TGGCGCGCGGGCCGAGAAGGGGTGCGGGGCGCGCCTCGGGGAGCGGAGGCCTGGAAACGGGGCGCCCCA-GAGGACGCCCCCA i mm10.chr11 C 0 C 0 e canFam3.chr9 15622777 391 - 61074082 M e rheMac3.chr16 46009 1216 + 80904711 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 15824 1086 + 73212453 I e panTro4.chr17 117254 1189 + 82630442 M a score=472806.000000 s hg38.chr17_GL383563v3_alt 119813 432 + 375691 AACTTCCCTCCTGTCCGGCCTGGGTCGGGGGAGGGCTCGAGGCC-GGTGGGCAGGG--CGCGGAGAGCGCACCGAGTGCGCCAGGGGCCCGCAAGCCCGCGGCGGGGTTGTGAACCG-----AGGCAGAGCGCGAGCGCGCGAG----GGGGACCGGCGGAGGGAAGCCGCGAGGCC-------GTGGGGGGGCCGAGCCCGAGCC---AGGGGAGGGGGCGCGAAGTCGGCGCGTG--------GGAAACTTACTGCAGTCGTCCGACTCGTAGCCGTCGGCGTCCGGCTCGTCCTCCGGCGGCTTGGCTGGCGGCCGC------------GCGgggctgggacccgggctggggcccgggctggAGCCGTAGGCTCCGAAGAGCTGGTCCACATCCTCGTCGTCCTCGCGGGCGCCGTCGGAGGGGCTGCGGCGGCCGGCACCGGCCACAGCCGGGCGCGCGGGGGCGTCCG s macFas5.chr16 45762 430 + 80997621 AACTTCCCTCCTCTCCGGTCCGGGTC-AGGGAGGGCTCGAGGCC-GGCGGGCAGGG--CGCGGGGAGTGCACGGAGCGCGCGAGGGGCCCGCAACCCCGCGGCGGGGGTGTGCGCCG-----AGGGAGAGCGCGACCACGCGAG----GGGGACCGGCCGAGGGGACCCGCGAGGCC--------TGGGGGCGCCAAGCCCAAGCC---AGGGGAGGGGGCGCGAAGTCGGCGAGTT--------GGAAACTTACTGCAATCGTCCGACTCGTAGCCGTCGGCGTCCGGCTCGTCCTCCGGCGGCTTGGCGGGGGGCCGC------------GCGGGGCTGGGACCCGGGCTGGGGCCCGGGCTAGAGCCGTAGGCTCCGAAGAGCTGGTCCACATCCTCGTCGTCCTCGCGGGCGCCGTCGGAGGGGCTGCGGCGGCCGGCACTGGCCGCGGCCGGGCGCGCGGAGGCGTCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 57561 412 + 74645514 AACTTCCCTCCTCCCCGGTCCgggtc-ggggagggcgcgaggcc-ggcgggcaggg--cgcggagagtgcacggagcgcgcgagg------------------gggggTGTGCGCCG-----AGGGAGGGCGCGACCACGCGCG----GGGGACCGGCCGAGGGGACCCGCGAGGCC--------TGAGGACGCCGAGCCCGAGCC---AGGGGAGGGGGCGCGAAGTCGGCGACTT--------GGAAACTTACTGCAATCGTCCGACTCGTAGccgtcggcgtccggctcgtcctccggcggcttggcgggcggccgc------------gcggggctggggcccgggctggggcccgggctggAGCCGTAGGCTCCGAAGAGCTGGTCCACATCCTCGTCGTCCTCGCGGGCGCCGTCGGAggggctgcggcggccggcactggccgcggccgggcttgcggaggcgtccg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 48714 429 + 75148670 AACTTCCCTCCTCTCCGGCCCGGGTC-AGGGAGGGCT-GAGGCC-GGCGGGCAGGG--CGCGGAGAGTGCACGGAGCGCGCGAGGGGCCCGCAACCCCGCGGCAGGGGTGTGCGCCG-----AGGGAGAGCGCGACCACGCGAG----GGGGACCGGCCGAGGGGACCGGCGCGGCC--------TGGGGGCGCCAAACCCGAGCC---AGGGGAGGGGGCGCGAAGTCGGCGAGTT--------GGAAACTTACTGCAATCGTCCGACTCGTAGCCGTCGGCGTCCGGCTCGTCCTCCGGCGGCTTGGCGGGCGGCCGC------------GCggggctgggacccgggctggggccggggctggagcCGTAGGCTCCGAAGAGCTGGTCCACATCCTCGTCGTCCTCGCGGGCGCCGTCGGAGGGGCTGCGGCGGCCGGCACTGGCCGCGGCCGGGCGCGCGGAGGCGTCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 863394 391 - 1291538 AACTTCCCTCCTCTCCAGCCCGGTCG----------------------GGGCAGGG--CTTGGA---------GAGCGCGCGAGGGGGCGGCGACTCACCTCCG------------G-----AGGAAGAG-GCGACCACGCTGGGGGCGGGGAGCGACCCAGGGGACCCGCGAGGC---------TGGGGGCGCCGAGCCCCAGCA---AGGGAAGGGCGAGCGAAGTCGGCGAGTT--------GGAAACTTACTGCAATCGTCTGACTCGTAGCCGTCGGCGTCGGGCTCGTCCTCTGGTGGCTTGGCAGGCGGGCAC------------GCggggctgggacccgggctggggccggggctggagcCGTAGGCGCCGAAGAGCTGGTCCACATCCTCGTCGTCGTCGCGGGCGCCGTCTGAGGGACTGCGGGAGCTGGCGCTGGCCGCTGCCGGGCGTGCAGGGGCGTCCG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75795415 312 + 122082543 AACTTCCCAGCTCTCCCGTGCGGTTG-----------------------TTCCGGG--CG-----------------------------------------------------------------------GCGGCGGCGCTTG---------------------CCCTGCGGGGAC----------------------CCGGGTG---CGGGGAGGGGGCGAGCGGCCGGCGACTG--------GGAAACTTACTGCAGTCGTCTGACTCGTAGCCGTCGACGTCCGGCTCGTCCTCGGGGGGCTTGGCGGGCGGCCTC------------GcggggctggggccggggctggggcctgggctggCTCCGTAGGCTCCGAAGAGCTGGTCCACATCTTCGTCGTCGTCGCGGGCGCCGTCGGAGGGGCTGCGGGGGCTGGCGCTGGCTGCGGGAGAgcgcgcgggggcgtccg i mm10.chr11 C 0 C 0 s canFam3.chr9 15623168 447 - 61074082 AACTTCCCACCTCTCCGTACgggccc-ggggaggggtcggggttgggtccgcagggtttgcgaagggcgcgcggagcgggcgggg-----gcggccccgc---gggagtgggtgccggcgacagggagcgcgc---------------ggaggccgggcgcggg---cggcgaggtcggggtcggggagcgcgcggaggccgggccggggggggggggggggcggggCCCCCGGCCTCTGCCGGGGGAAACTTTTTGGAGGCGTCGGAATTTTAACCCTCGGGGTCCGGGTTTTCCTCCGGGGGGTTGGGGGGGGGCCCCCcccgggccgggcccgggccggggcccgggccggggccggggcccgggccgTAGGATCCGAAGAGCTGGTCGACGTCCTCGTCGTCGTCGCGggcgccgtcggaggggctgcggcggcccgcgctggccgcggcggggcgcgcgggggcgtccg i canFam3.chr9 M 391 C 0 e rheMac3.chr16 46009 1216 + 80904711 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 15824 1086 + 73212453 I e panTro4.chr17 117254 1189 + 82630442 M a score=397004.000000 s hg38.chr17_GL383563v3_alt 120245 173 + 375691 GGGGTGCAGCGGCTCGGGGCCCGGCGTCCGGGGGCAGGCCCCGCGGGAAGCGGGGGAAGTAGTCGGAGATCTGCTTGATGGGCCGGGTGGGGCCGGGGCACACGTCGATGGCCATATGCTCCTGGATGCTGATGGTCGCCTTCTCCCCGCGCCGCCGGAGGGTCATGCAGGCA s panTro4.chr17 118492 164 + 82630442 GGGGTGCAGCGGCTCGG--TCCCGCGTCCGGGG-CAGCCCCC-CGGGAAGCGGGGGA-GTAGTCG-AGATCTGCTTGATGGGACGA-TGGGGCCGGGGCACACGTCGATGACCATATGCTCCTGGATGCTGATG-TCGCCTTCTCCC-GCGCCGCCGGAGGGTCATGCAGGCA i panTro4.chr17 M 1189 C 0 s macFas5.chr16 46192 173 + 80997621 GGGGCGCAGCGGCGCGGGGCCCGGCGTCCGGGGGCAGGCCCCGCGGGAAGCGGGGGAAGTAGTCGGAGATCTGCTTGATGGGACGGATGGGGCCGGGGCACACGTCGATGGCCATATGCTCCTGGATGCTGATGGTCGCCTTCTCCCCGCGCCGCCGGAGGGTCATGCAGGCA i macFas5.chr16 C 0 M 1771 s papAnu2.chr16 57973 173 + 74645514 ggggcgcagcggcgcggggcccggcgtccggggggaggccccgcgggaagcgggggAAGTAGTCGGAGATCTGCTTGATGGGGCGGATGGGGCCGGGGCACACGTCGATGGCCATATGCTCCTGGATGCTGATGGTCGCCTTCTccccgcgccgccggagggtcatgcaggca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49143 173 + 75148670 GGGGCGCAGCGGCGCGGGGCCCGGCGTCCGGGGGCAGGCCCCGCGGGAAGCGGGGGAAGTAGTCGGAGATCTGCTTGATGGGACGGATGGGGCCGGGGCACACGTCGATGGCCATATGCTCCTGGATGCTGATGGTCGCCTTCTCCCCGCGCCGCGGGAGGGTCATGCAGGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 863785 173 - 1291538 GGGGCGCCGGGGTGCGGAGCGCGGCGTCCTGGGGGAGGCCCCGCGGGAAGCGGGGGAAGTAATCGGAGATCTGCTTGATGGGGCGGATGGGGCCGGGGCACACGTCGATGGCCATATGCTCCTGGATGCTGATGGTCGCCTTCTCCCCGCGCCGCCGGAGGGTCATGCAGGCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75795727 173 + 122082543 ggggcgcgggggcgcggggcgcggcggTAGGGGGGAGGCCCCGCGGGAAGCGGGGAAAATAATCGGAGATCTGCTTGATAGGCCGAATGGGGCCGGGACACACGTCGATGGCCATATGCTCCTGGATGCTGATGGTCGCCTTCTCCCCGCGCCGCCGGAGGGTCATGCAGGCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15623615 173 - 61074082 gggccgcggcggcgCGGGGCCCGGCGTCCGGGGGCAGGCCCCGGGGGAAGCGGGGGAAGTAGTCGGAGATCTGCTTGATGGGCCGAATGGGGCCGGGGCACACGTCGATGGCCATATGCTCCTGGATGCTGATGGTCGCTTTCTCCCCGCGCCGCCGGAGGGTCATGCAGgca i canFam3.chr9 C 0 C 0 e rheMac3.chr16 46009 1216 + 80904711 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 15824 1086 + 73212453 I a score=240624.000000 s hg38.chr17_GL383563v3_alt 120418 181 + 375691 GCGCCGCCCCGCCCCGGGCGCGG-CCCGGCCCGGCGCGACCCCGGCCCGGGGGCGGCTCAGCAGGCCCGGCGGGGCGCGGCGGGGGCTGCGGGCATCGCCGGCCGCGCCCCCGGACGGCCCTGACTTGGCCGCTGCCCGCTCCGCTGCGGACGGCGCGAGCGAGTGCCAG-AGGCCGGCAGGC s panTro4.chr17 118656 181 + 82630442 GCGccgccccgccccgggcgcgg-cccggcccggcgcgaccccggcccgggggcggctcagcaggcccggcggggcgcggcGGGGGCTGCGGGCATCGCCGGCCGCGCCCCCGGACGGCCCTGCCTTGGCTGCTGCCCGCTCCGCTGCGGACGGCGCGAGCGAGTGCCAG-AGGCNGGCAGGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 58146 166 + 74645514 gcgccgccccgccccgggcgcgg-cccggcccggcgcgaccccggcccgggggcggctcagcaggcccggcggggcgcggcgggggctgcaggcatcgccggccgcgccCCCGGACGGCCCTGACTCGGCTGCTGCCCGCTGCGCTGCGGACGGCTGGAGTGAGC----------------GC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49316 181 + 75148670 GCGCCGCCCCGCCCCGGGCGCGG-CCCGGCCCGGCGCGACCCCGGCCCGGGGGCGGCTCAGCAGGCCCGGCGGGGCGCGGCGGGGGCTGCAGGCATCGCCGGCCGCGCCCCCGGACGGCCCTGACTTGGCTGCTGCCCGCTCCGCTGCGGACGGCTCGAGTGAGCGCCAG-GGGCCGGCAGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 863958 176 - 1291538 gcgccgccccg-ctcgggcgcggccccggcccggcgcgacctcggcccgggggcggcTCAGCA-GCCCGG-AAGGCACGGCGGGGGCTGTGGGCATCGCCGGCCGCG-CCCCGGACGGCCCTGACGCTGCTGCTGCCGGCTCC---GCGGCCGGCGCGAGTGAGTGCTGGAAGGCCTGGCAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75795900 176 + 122082543 gcgccgcggcgcgc--ggcccgg-cccggcccggTGTGACCCCGGCCCGGGGGCAAGTCAGCGGGTCCCGCGGGGCGCTGCGGGGGCTGCGGTCATCGCCAGCGTGGCCCCCGGACGGCCCTGACGCGGCTGCTGCCTGCTCGGCGGCGGCCGGTGCGAGTGAGTGC--G-GGGCCGGCA-GC i mm10.chr11 C 0 C 0 s canFam3.chr9 15623788 177 - 61074082 gcgcggccccg-cccgggcgcgg-ccctgcccggcccggggacggcggggaggcgg-tcggcaggcccggcggggcgcggcgagggctgcgggcaccgccggcggcgcCCCCGGACGGCCCTGACCCGGCTGCTGACTGCTCAGCCGCGGCCGGCTGGA--TAGCGCCGG-GGGCTCGCAGGC i canFam3.chr9 C 0 M 87 e rheMac3.chr16 46009 1216 + 80904711 M e macFas5.chr16 46365 1771 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 15824 1086 + 73212453 I a score=24770.000000 s hg38.chr17_GL383563v3_alt 120599 19 + 375691 AGGGGGCGGGCCCA-GCCCG s panTro4.chr17 118837 19 + 82630442 AGGGGGCGGGCCCA-GCCCG i panTro4.chr17 C 0 C 0 s papAnu2.chr16 58312 19 + 74645514 AGGGGGCGGGCCCA-GCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49497 19 + 75148670 AGGGGGCGGGCCCA-GCCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 864134 20 - 1291538 AAGGGGCGGGCCCAGGTCCG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75796076 19 + 122082543 AGGGGGCGGGCCCA-GCCCG i mm10.chr11 C 0 C 0 e canFam3.chr9 15623965 87 - 61074082 M e rheMac3.chr16 46009 1216 + 80904711 M e macFas5.chr16 46365 1771 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I e ponAbe2.chr17 15824 1086 + 73212453 I a score=37474.000000 s hg38.chr17_GL383563v3_alt 120618 22 + 375691 CGTCACCCGGCAGC-AACCAAGC s panTro4.chr17 118856 22 + 82630442 CGTCACCCGGCAGC-AACCAAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 16910 22 + 73212453 CGTCAACCGGCAGC-ATCCAAGC i ponAbe2.chr17 I 1086 C 0 s papAnu2.chr16 58331 22 + 74645514 CGTCACCCGGCAGC-AGCCAAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49516 22 + 75148670 CGTCACCCGGCGGC-AGCCAAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 864154 23 - 1291538 CGTCACCCGGCGGCAAGCCAAGC i calJac3.chrUn_GL286409 C 0 M 544 s mm10.chr11 75796095 22 + 122082543 CGTCACCCGGCagc-aaccaagc i mm10.chr11 C 0 C 0 e canFam3.chr9 15623965 87 - 61074082 M e rheMac3.chr16 46009 1216 + 80904711 M e macFas5.chr16 46365 1771 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=3110.000000 s hg38.chr17_GL383563v3_alt 120640 3 + 375691 AGG s panTro4.chr17 118878 3 + 82630442 AGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 16932 3 + 73212453 AGG i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 58353 3 + 74645514 AGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49538 3 + 75148670 AGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75796117 1 + 122082543 --g i mm10.chr11 C 0 C 0 e canFam3.chr9 15623965 87 - 61074082 M e calJac3.chrUn_GL286409 864177 544 - 1291538 M e rheMac3.chr16 46009 1216 + 80904711 M e macFas5.chr16 46365 1771 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=124994.000000 s hg38.chr17_GL383563v3_alt 120643 128 + 375691 GTGAGTGTGCGGGCTGCGCGGGC-----------------GGCGCGGAGCG---GAGGGAGCCGCGCGG----CGCCA----------CACTCACTCGCACTCGCACTCACACC-GGCGTGCACGCCGGCCCGGGACCCCGCGCGCGCACACTCGCGGCCAGG s panTro4.chr17 118881 128 + 82630442 GTGAGTGTGCGGGCTGCGCGGGC-----------------GGCGCGGAGCG---GAGGGAGCCGCGCGG----CGCCA----------CACTCACTCGCACTCGCACTCACACC-GGCGTGCACGCCGGCCCGGGACCCCGCGCGCGCACACTCGCGGCCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 16935 129 + 73212453 GCGAGTGATCCGGATGCGCGGGC-----------------GTCGCGGAGCG---GAGGGAGCTGCGCGG----CACCA----------CACTCACTCGCACTCGCATTCACACCGGGCGTGCGCGCCGGCCCGAGACCCCGCGCGCGCACACTCGCGGCCAGG i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 58356 122 + 74645514 GCGAGTGTgcggactgcgcgggc-----------------ggcgcggagcg---gagggagccgcgcgg----cgcca----------cactcactcgcac------tcacacc-ggcgcgcacgccggcccgggaccccgcgcgcgcacactcgcggccggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49541 122 + 75148670 GCGAGTGTGCGGACTGCGCGGGC-----------------GGCGCGGAGCG---GAGGGAGCCGCGCGG----CGCCA----------CACTCACTCGCAC------TCACACC-GGCGCGCACGCCGGCCCGGGACCCCGCGCGCGCACACTCGCGGCCGGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75796118 128 + 122082543 gtgagtgtgcgggctgcgcgcgcgggcgggcgggctggcgggcacggagagagcgagggagc-gagcga-----gccagGAGAGCAACCACTTCCTCGCGC------TCACAC--GGCGCGCTCACACACGCGGGA-----GACGCG---------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15624053 99 - 61074082 GTGAGCGAGCCGGCTGCGCGTCC-----------------GTAAGGGAGCG---GAGCGAGCCGAGCGGGCGGCGCCG----------CACTTTTTCGCGC------Tggcccc-ggcgcgcgcacccccgcgggc--------------------------- i canFam3.chr9 M 87 C 0 e calJac3.chrUn_GL286409 864177 544 - 1291538 M e rheMac3.chr16 46009 1216 + 80904711 M e macFas5.chr16 46365 1771 + 80997621 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=12361.000000 s hg38.chr17_GL383563v3_alt 120771 9 + 375691 CAGGGCCGC s panTro4.chr17 119009 9 + 82630442 CAGGGCCGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 17064 9 + 73212453 AGGTGACGC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 48136 9 + 80997621 CAGGGCCGC i macFas5.chr16 M 1771 C 0 s papAnu2.chr16 58478 9 + 74645514 cagggccgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49663 9 + 75148670 CAGGGCCGC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75796246 9 + 122082543 CAGGGCCAC i mm10.chr11 C 0 C 0 s canFam3.chr9 15624152 1 - 61074082 --------c i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 864177 544 - 1291538 M e rheMac3.chr16 46009 1216 + 80904711 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=199297.000000 s hg38.chr17_GL383563v3_alt 120780 105 + 375691 CGGGCGCCTTCCGCTCATGCACGCCCGCGGCACAAGCTGGGAGTCAACCCGGCAGGGACCCGCAGGACGCGCACCCACACGTTCCCGCGCGTGCCAGCCCACGCT s panTro4.chr17 119018 105 + 82630442 CGGGCGCCTTCCGCTCATGCACGCCCGCGGCACAAGCTGGGAGTCAGCCGGGCAGGGACCCGCAGGACGCGCACCCACACGTTCCCGCGCGTGCCAGCCCACGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 17073 83 + 73212453 CGGGCGCCTTCCGCTCAGGCACGGCCGC----------------------GGTGGAGACCCGCAGGACGCGCACCCACACGTTCCCGCGCGTGCCAGCCCACGGT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 47225 105 + 80904711 CGGGCGCCTTCCGCTCATGCACGGCCGCGGTACAAGCCGGGAGCCGGCCGGGCAGGGACCCGGAGGACGCGCACCCACACGTTCCCGCGCCTGCCAGCCCACGCT i rheMac3.chr16 M 1216 C 0 s macFas5.chr16 48145 105 + 80997621 CGGACGCCTTCCGCTCATGCACGGCCGCGGTACAAGCCGGGAGCCGGCCGGGCAGGGACCCGCAGGACGCGCACCCACACGTTCCCGCGCCTGCCAGCCCACGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 58487 105 + 74645514 cgggcgccTTCCGCTCATGCACGGCCGCGGTACAGGCGGGGAGCCAGGCGGGCAGGGACCCGCAGGACGCGCACCCACACGTTCCCGCGCCTGCCAGCCCACGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49672 105 + 75148670 CGGGCGCCTTCCGCTCATGCACGGCCGCGGTACAAGCGGGGAGCCAGCCGGGCAGGGACCCGCAGGACGCGCACCCACACGTTCCCGCGCCTGCCAGCCCACGCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75796255 50 + 122082543 TCGGAGCCTTTGCCTCACTTAGGCTCGC-----AGACTGGG--------------------------------------------------TGCCAGCCCATGAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15624153 99 - 61074082 ccggcgccTTCCACGCGCGCACAGCGGCGG-GCCCGCTGGGAG---GCTGGGCAGGGAGCCGCAGGACGCG--CCGCCGCGTTCCCGCCCGTGCCAGCCCTCGCT i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 864177 544 - 1291538 M e nomLeu3.chr19 81496740 0 + 81552678 I a score=48034.000000 s hg38.chr17_GL383563v3_alt 120885 16 + 375691 GGGCTCCGCTCGCTCT s panTro4.chr17 119123 16 + 82630442 GGGCTCCGCTCGCTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 17156 16 + 73212453 GGGCTCTGCTCGCTCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 71848 16 - 81552678 GGGCTCTACTGGCTCT i nomLeu3.chr19 M 14910 C 0 s rheMac3.chr16 47330 16 + 80904711 GGGCTCTGCTCGCTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 48250 16 + 80997621 GGGCTCTGCTCGCTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 58592 16 + 74645514 GGGCTCTGCTCGCTCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49777 16 + 75148670 GGGCTCTGCTCGCTCT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75796305 15 + 122082543 GGGCTGCATTC-CACT i mm10.chr11 C 0 C 0 s canFam3.chr9 15624252 16 - 61074082 GGGTTCTGTTCGCTCG i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 864177 544 - 1291538 M a score=2321669.000000 s hg38.chr17_GL383563v3_alt 120901 803 + 375691 CTCG---GGACACACGCAGGTGTGCAAGTGCACACATGCGTGTGCAGAGACACGTGGTGGAAGCATCCGCTCGCT-CACACCGTAGGTCACACACGCAAACGTCTGCATGCGCACAT----GGTTGGTTTAGGAAGCTGTGACACAGTACACCCCCAATGCACAGGCGCGCACACCTAATGGAGCACACACACAGGTGATCAAGGGCACCCAGGGCACAGGCTTCCCTACCCCCAAGCACCCCTAACAAGATGCACAAACATGAGCCCATAGAAGTGATCAGGGGACCCTGGGCACAACTCCTTC------TCTCCTCCCCC-----TCTA---------GCAGGACGTGGAGTCACACTCCTAGCATGTAGGGACAGGTTGCCTACACACGGGCAGGACATGTACACGCTCAACTGCACAAGGACACCGG-GGCTCAGTCTGTGCACACATATTCTCAGGTCACATAC---AA-CACAGCA----CTC----TAACCTCGGGTCAGTCCCTCACTTGGTCAGTGAGTAGAGTCTGAAGGACCCCCC------GGGGCAGGGTGGCTGAGAACCTGCA-CAG---GGCCTGGTCAGG-------------AGCG-----GGTGAGGGCAGGG-----CCTGGG---------------CGGTGAGTGA-------TGCA-------------ATAAGGCTGGGCGGCACGCTCCCCCCACCCCCACTCCTACTCTAGGCCTCCCACACGGTCAGATCACTAAACAAATCCCAGAGGGCCCAGCCCTGGCTGTCCGGCTTTCCGGGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCTG----GGCATGGATGGAATCCTGTTTACCCTCTGGTTTCCACTGATGTGTAAGA-- s panTro4.chr17 119139 803 + 82630442 CTCG---GGACACACGCAGGTGTGCAAGTGCACACATGCGTGTGCAGAGACACGTGGTGGAAGCATCCGCTCGCT-CACACCGTAGGTCACACACGCAAACGTCTGCATGCGCACAC----GGTTGGTTTAGGAAGCTGTGACACAGTACACCCCCAATGCACAGGCGCGCACACCTAATGGAGCACACACACAGGTGATCAAGGGCACCCAGGGCACAGGCTTCCATACCCCCAAGCACCCCTAACAAGATGCACAAACATGAGCCCATAGAAGTGATCAGGGGACCCTGGGCACAACTCCTTC------TCTCCTCCCCC-----TCTA---------GCAGGACGTGGAGTCACACTCCTAGCGTGTAGGGACAGGCTGCCTACACACGGGCAGGACATGTACACGCTCAACCGCACAAGGACACCGG-GGCTCAGTCTGTGCACACATATTCCCAGGTCACATAC---AA-CACAGCA----CTC----TAACCTCGGCTCAGTCCCTCACTTGGTCAGTGAGTAGAGTCTGAAGGACCCCCC------GGGGCAGGGTGGCTGAGAACCTGCA-CAG---GGCCTGGTCAGG-------------AGGG-----GGTGAGGGCAGGG-----CCTGGG---------------CGGTGAGTGA-------CGCA-------------ATAAGGCTGGGCGGCACCCTCCCCCCACCCCCACTCCTACTCTAGGCCTCCCACACGGTCAGATCACTAAACAAATCCCAGAGGGCCCAGCCCTGGCTGTCCGGCTTTCCGGGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCTG----GGCATGGATGGAATCCTGTTTACCCTCTGGTTTCCACTGACGTGTAAGA-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 17172 806 + 73212453 CTCG---GGACACACGCAGGTGTGCAAGTGCACACCTGCGTGTGCAGAGACACGTGGTGGAAGCATCCGCTCGCT-CGCACCGTAGGACACACACGCAAACGTCTGCATGCGCACATACAGGGTTGGTTTAGGATGCTGTGACACGGTACACCCCCAATGCACAGGCGCGCACACCTAATGGAGCACACACAGAGGTGATCAAGGGCACCCAGGGCACAGGCTTCCATACCCCCAAGCAGCCCTAACAAGACGCACAAACATGCGCCCATAGAAGTGATCAGGGGACCCTGGGCACAACTCCTTC------TCTCCTCCCCC----ATGTA---------GCAGGACATGGAGTCACACTCCTAGCGTGTAGGGACAGGCTGCCTACACACGGGCAGGACATGTACACGCTCAACTGTACAAGGACACCAG-GGCACAGTCTGTGCACACATGTTCTCAGGTCACATAA---AA-CACAGCA----CTC----TAACGTCGAGTCAGTCCCTCACTTGGTCAGTGAGT--AGTCTGAAGGACCCACC------GGGGCAGGGTGGCTGAGAACCTGCA-CAG---GGCCTGGTCAGG-------------AGCG-----GGTGAGGGCAGGG-----CCTGGG---------------CGATGAGTGA-------TGCC-------------ATGAGGCTGGGCGGCACCCTCCCCCCACCCCCACTCCTACTCTAGGCCTCACACATGGTCAGATCACTAAACAAATCCCAGAGGGCCCAGCCCTGGCTGTCCGGCTTTCCGGGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCTG----GGCATGGATGGAATCCTGTTTACCCTCTGGTTTCCACTGACGTGTAAGA-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 71864 758 - 81552678 CTCG---GGACACACGCAGGTGTGCAAACGCACACCTGCGTGTGCAGAGACACGTGGTGGAAGCATCCGCTCGCT-CACACCGCAGGACACACACACAAACGTCTGCATGCGCACATACAGAGTTGGTTTAGGATGCTGTGACACAGTACACCCCCAATGCACAGGCGTGCACACCTAATGGAGCACACACACAGGTGATCAAGGGCACCCAGGGCACAGGCTTCCATACCCACAAGCACCCCTAACAAGACGCACAAACATGTGCCCACAGAAGTGATCAGAGGACGCTGAGCACAACTCCCTC------TCTCCTCCCCC----ATCTA---------GCAGGACATGGAGTCACACTCCTAGCGTGTAGGGACAGGCTGCCTACACACGGGCAGGACATGTACACGCTCAACTGTACAAGGACACCGG-GGCACAGTCTGTGCACACATATTCTCAGGTCACATAC---AA-CACAGCA----CTC----TAACCGCGGGTCAGTCCCTCACTTGGTCAATGAGT--AGTCCGAAGGACCCACC------G----------------------------------------------------------------------GGGCAGGG-----CCTGGG---------------CGGTGAGTGA-------TGCA-------------GTGAGGCTGGGCGGCACCCTCCCCCCACCCCCACTCCTACTCTAAGCCTCCCACATGGTCAGATCACTAAACAAATCCCACAGGGCCCAGCCCCGGCTGTCCCGCTTTCCGGGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCTG----GGCATGGATGGAATCCTGTTTACCCTCTGGTTTCCACTGACGTGTAAGA-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 47346 799 + 80904711 CTCG---GGACGCACGCAGGTGTGCAAGTGCACACACGCGTGTGCAGAGATACGTGGTGGAAGCATCCGCTCGCT-CACACCGTGGGACACACATACAAACGTCTGCATGCGCACGT--AGAGTTGGTTGAGGGTGCTGTGACACAGCGCACCCCCCGTGCACACGCGCGCACACCTCATGGAGCGCACACACAGG---TCAAGGGCACCCAGGACACAGGCTTCCACACCCCCAAGCACCCCTAACAAGACACACAAACATGCGCCCATAGAAGTGACCAGGGGACCCTGGGCACAAGTCCCTC------TCTTCCCCCCC----ATCTA---------GCAGGACATGGAGTCACTCTCCTAGCGTGTAGGGACAGGCTGCCTACACACGGGCAGGACATGTAGACGCTCAACTGTGCAAGGACACGGG-GGCACAGTCTGTGCACACATATTCTCAGGTCACATAC---AA-CACAGCA----CTC----GAACCTCGGGTCAGTCCTTCACTCGGTCAGTGAGT--AGTCCGAAGGACCCACC------GCGGCAGGGTGGCTGAGAACCTGGA-CAG---GGCCTGGTCAGG-------------AGCG-----GGTGAGGGGAAGG-----TCTGGG---------------CGGTGAGTGA-------TGCA-------------ATGAGGCTGGGCGGCACCCTCCCCCCA-CCACACTCCTACTCTAGGCCTCCCACACGGTCAGATCACTAAACAAATCCCAGAGGGCCCAGCCCTGGTTGTCTGGCTTTCC-GGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCCG----GGCACGAATGGAATCCTGTTTACCCTCTGGTTTCCACTGACGGGAAAGA-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 48266 799 + 80997621 CTCG---GGACGCACGCAGGTGTGCAAGTGCACACACGCGTGTGCAGAGATACGTGGTGGAAGCATCCGCTCGCT-CACACCGTGGGACACACATACAAACGTCTGCATGCGCACGT--AGAGTTGGTTGAGGGTGCTGTGACACAGCGCACCCCCCGTGCACACGCGCGCACACCTCATGGAGCGCACACACAGG---TCAAGGGCACCCAGGACACAGGCTTCCACACCCCCAAGCACCCCTAACAAGACACACAAACATGCACCCATAGAAGTGACCAGGGGACCCTGGGCACAAGTCCCTC------TCTCCCCCCCC----ATCTA---------GCAGGACATGGAGTCACTCTCCTAGCGTGTAGGGACAGGCTGCCTACACACAGGCAGGACATGTAGACGCTCAACTGTGCAAGGACACGGG-GGCACAGTCTGTGCACACATATTCTCAGGTCACATAC---AA-CACAGCA----CTC----GAACCTCGGGTCAGTCCTTCACTCGGTCAGTGAGT--AGACCGAAGGACCCACC------GCGGCAGGGTGGCTGAGAACCTGGA-CAG---GGCCTGGTCAGG-------------AGCG-----GGTGAGGGGAAGG-----TCTGGG---------------CGGTGAGTGA-------TGCA-------------ATGAGGCTGGGCGGCACCCTCCCCCCA-CCACACTCCTACTCTAGGCCTCCCACACGGTCAGATCACTAAACAAATCCCAGAGGGCCCAGCCCTGGTTGTCTGGCTTTCC-GGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCCG----GGCACGAATGGAATCCTGTTTACCCTCTGGTTTCCACTGACGGGAAAGA-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 58608 799 + 74645514 CTCG---GGACGCACGCAGGTGTGCAAGTGCACACACGCGTGTGCAGAGATCCGTGGTGGAAGCATCCGCTCGCT-CACACCGTAGGACACACATACAAACGTCTGCATGCGCACAC--AGAGTTGGTTGAGGGGGCCGTGACACAGCGCACCCCCCGTGCACACGCGCGCACACCTCATGGAGCGCACACACAGG---TCAAGGGCACCCAGGACACAGGCTTCCACACCCCCAAGCACCCCTAACAAGACACACAAACATGCGCCCATAGAAGTGACCAGGGGACCCTGGACACAagtccctc------tctcctccccc----atcTA---------GCAGGACATGGAGTCACTCTCCTAGCGTGTAGGGACAGGCTGCCTACACACGGGCAGGACATGTAGACGCTCAACTGTGCAAGGACACGGG-GGCACAGTCTGTGCACACATATTCTCAGGTCACATAC---AA-CGCAGCA----CTC----GAACCTCGAGTCAGTCCTTCACTCGGTCAGTGAGT--AGTCCGAAGGACCCACC------GCGGCAGGGTGGCTGAGAACCTGGA-CAG---GGCCTGGTCAGG-------------AGCG-----GGTGAGGGGAAGG-----TCTGGG---------------CGGCGAGTGA-------TGCA-------------ATAAGGCTGGGCGgcaccctcccccca-ccacactCCTACTCTAGGCCTCCCACACGGTCAGATCACTAAACAAATCCCACAGGGCCCAGCCCTGGTTGTCTGGCTTTCC-GGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCTG----GGCATGAATGGAATCCTGTTTACCCTCTGGTTTCCACTGACGGGAAAGA-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 49793 798 + 75148670 CTCG---GGACGCACGCAGGTGTGCAAGTGCACACACGCGTGTGCAGAGATACGTGGTGGAAGCATCCGCTCTCT-CACACCGTAGGACACACATACAAACGTCTGCGTGCGCACAT--AGAGGTGGTCGAGGGTGCTGGGACACAGTGCA-CCCCAGTGCACACGCGCGCACACCTCATGGAGCGCACACACAGG---TCAAGGGCACCCAGGACACAGGCTTCCACACCCCCAAGCACCCCTAACAAGACACACAAACATGCGCCCATAGAAGTGACCAGGGGACCCTGGGCACAGGTCCCTC------TCTCCTCCCCC----ATCTA---------GCAGGACATGGAGTCACTCTCCTAGCGTGTAGGGACAGGCCGCCTACACACGGGCAGGACATGTAGACGCTCAACTGTGCAAGGACACGGG-GGCACAGTCTGTGCACACATATTCTCAGGTCACATAC---AA-CACAGCA----CTC----GAACCTCGGGTCAGTCCTTCACTTGGTCAGTGAGT--AGTCTGAAGGACCCACC------GCGGCAGGGTGGCTGAGAACCTGGA-CAG---GGCCTGGTCAGG-------------AGCG-----GGTGAGGGGAAGG-----TCTGGG---------------CGGTGAGTGA-------TGCA-------------ATGAGGCTGGGCCGCACCCTCCCCCCA-CCACACTCCTACTCTAGGCCTCCCACATGGTCAGATCACTAAACAAATCCCAGAGGGCCCAGCCCTGGTTGTCTGGCTTTCC-GGACCAGAGCTCTGTTGGGAAC-TGCTGCTGCTTGGACAGGTGTGTTCCCGGAAAGCCCTG----GGCATGAATTGAATCCTGTTTACCCTCTGGTTTCCACTGACGTGAAAGA-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 864740 744 - 1291538 CCCG---GGACGCACGCAGGTGTGCCGGT----------------ATAGAGACGCGGTGGAGGCCTCCGCTCGAT-CGAACCCGTGGACACACAC----ACGCGTGCGTGGGCACAC--AGAGTTGGTCAAGGGTGCTGCGGCACAGCGCA-CCCCAACGCCCACGGGCTCACACCTTGCAGAACACACACACGGGTGATCAAGGGC---------------------ACCCCTGAGCCCC-----CAACACACACAAACATGCGGCCATAGAAGTGATC-GGGGACCCTGGGCACAACTCCCTC------TGTCCTCCTGCATCTATCTA---------GCAGGACTCGGGGTGA-GCTCCTAGTGGGTAGGGACAGGCCGCCTACACACGGG-----CATGGACATGCCCAACTGTACATGGACACCGC-GGCACAGTCTGTGCACACATATTCTCAGGTCTCATACTCTAA-CACAGCA----CTC----TAACCTCCAGTCAGCCCCTCACTTGCTCAGTGAGT--GGCTTGAAGGACCCACC------AGGGCAGGGTGGCTGAGAACCTGGA-CAG---GGTCTGGTCAGA-------------AA-G-----GGTGAGGGCAGGG-----CCTGGG---------------CCGTAAGTGA-------GACA---------------GAGGCTGGGCGGCATCCCCACCCCG-----ACCCTTACTCTGGGTCTCTCACATGGTCAGATCACTAAACAAATTCCACAGGGCCCAGCCCC-GCTGTCCGGCTTTCCAGGACCAGAGCCCTGGTGGGAAT-GGCTGTT-CGTGGACAG--GTGTCCCCAGAAAGCCCTG----GACACAGATGGAATTCTGTTTACCCTCTGGTTTCCACTGAC-CATGAGA-- i calJac3.chrUn_GL286409 M 544 C 0 s mm10.chr11 75796320 750 + 122082543 CTCGTGCAGACACACACAGA----------CACACAAATGTGTGTAGAGACACTCAGTGGAAAAGATCACCCATTCCGGGCTCCAGGCTACAGACA----------CATGCACTGGT--------------GGATGCTAAGGCATGGTGCACCTCC------CCAGCATGCAAAATACATACAAGAGACACAT--GTTCGCAAGGATGCCCAGGG--CAGTCTTCCGTGC---TGGGCTCAACTCACAGAACCCATAA-----TAGCCATAGAAGCCATTTGGGGATG-TGGATAGGAACTCCTCAAAAAATCCCCTCCTTT----GTAGAGGCAGGTAGGTAGGCCACAGGATTACCCTGCCAG------GGAACAGGCTGTTTACTTCCTAGCAGGACAAGTGTACCCTGGGCTGTCCCAGGACACTGCTGGGACAGTC--TGCTTACTTCCTCTCAGGTCACATGT---AA--ACAGGAGCGTCTA----TGACCTGGGCCAGACTCCTCACTCAGTCCCTGAGT--GGCTTAAAAGACCCAGA------AGAACAGGCTGGGTGAGAACTTGGACCGG---GGCATGGTCAGGATGGACAGAGGGAAGCA-----GGCCAGGCCAGGGATCTCCTGGGG---------------TGATGACTGAGTTCAGGTGTA---------------AAGGCAAGGTGCTGCCTGGCCCACA-------------CTTGTGCCTCCCA-----------TGCCAGGCAAATCCC---TGCCGCAGTTCAGG---------------GAAC---AGCTGTGCTGGGAGCAGGCTGCTGCGTGTGCAGATGCATCTCCAGTAAGCCCTGGGCCGGCGAGGATGGAACCCTGTTTA--CTCTGGTTTTCACTGACGCGTGGGA-- i mm10.chr11 C 0 I 1312 s canFam3.chr9 15624268 654 - 61074082 CACA---GGA--CACGCGGGGGTGCCGAGTCACTCCAA-----GCAGAGAAGCCT-GTGCAGACACTTG---GCT-CACCTCGCAGGACGCACACGCAGACC----GATGGACCCTTGCAGAGTTGGTTGGGGTGGCTGTAGTACACCACGCTCCC----------------------------------------------AGGACAC---------------------------GCCCGCCTAACGGGACACAC------GCGCTCGTGGGCGTGAT-GGGGGACTCGGAGCGC--------C---------------------GCCCA---------GCAGGACACACGGG---------AGCGTGC--------------------------GGACAGGTACATCCTCGCTGGTCCAAGGTCATGGG-----CAGTCTGTTCACACTTCCTCCCAGGTCGCGTAC---AAGCACA-CA----CCCTCCGTAGCCCCGAGTCAGTCCCTCAGCTGGTTAGGGAGC--CGCC------ACCTCTCCTGGTGGGGACGGGGTAGGTGAGAACCTTGA-CCGCCAGCTGTGGTCAGG-------------AGAGGGGACGGCGGGGACGGGG-----CCTGGGCAGAAGGCACCTTCCCAGTGAGCGA-------TGGATGAGGTGGAAGTGGGGAGGCAGGGCGCTGCCGCCCGCAGG-------------CTCAGGCTCCCCACCTGGTAAG----------AAAGCC----GGGCCCAGT------------GCTTTCCGGGGGC--GGCTCTGTGGGGAAT-GGCCGCGGCTTATACAGGTGTGTCTCCGGGAAGCCCTG----GGCCGGGACAGGATCCTGTTTACTCCCCAGTTTCTAGTGACATATTAGAAA i canFam3.chr9 C 0 C 0 a score=59564.000000 s hg38.chr17_GL383563v3_alt 121704 21 + 375691 CACTTAGCTT----------------CTTAGC-GGGTG s panTro4.chr17 119942 21 + 82630442 CACTTAGCTT----------------CTTAGC-GGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 17978 22 + 73212453 CACTTAGCTT----------------CTTAGCTGGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 72622 21 - 81552678 CACTGAGCTT----------------CTTAGC-TGGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 48145 22 + 80904711 CACTTAGCTT----------------CTTAGCTGGGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 49065 22 + 80997621 CACTTAGCTT----------------CTTAGCTGGGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 59407 22 + 74645514 CACTTAGCTT----------------CTTAGCTGGGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 50591 22 + 75148670 CACTTAGCTT----------------CTTAGCTGGGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 865484 22 - 1291538 CGCTTAGCTT----------------CTTAGCAGGGGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15624922 37 - 61074082 CGCTTATCTTCAGAAAAcctgggtagctcagt-gggtg i canFam3.chr9 C 0 I 203 e mm10.chr11 75797070 1312 + 122082543 I a score=1892421.000000 s hg38.chr17_GL383563v3_alt 121725 575 + 375691 CCTTTGGTGCATCTGAATGAGGGGCTCCAAGCCTCTCT-TGTTCCCCCACCATAACCCCTGCAGAGTGATGGGGAGCAGAGGAAAGAGAGGcaaagccttggcctgtggcttccagctgcacagttctggcaggctatttgacctctttgagcctcggtttcctcatctatgaagtgaggctatttccaactgcacagccttgtggcaaggccccatccagcaca------gacaggtaagaggtgctcagCTGGCTTTCCCTTCTC---CCTTCCTTTGGAAAGACAAGACTCG-TGGTGAGAAGTGATGAGAAAT----TCATGTTTTGTGGTGAGTTCTG----AACTGGGTGGTGGCGGGCACTACCGGCCTTTGAAAACACTGGAGAAACACATGGCATATGTTgtactgcgccaagaacattcacagctgtcatctcattgattccttaaaccaccccacgatgtaggcagggcctgctgttcccatttcacaggggaggaaattagcgctcaggcacaaggatgtgtccagggtgactgctg--gctggcggcagagctgcgatgagagccc--agtgtcctgactgttcg-- s panTro4.chr17 119963 575 + 82630442 CCTTTGGTGCATCTGAATCAGGGGCTCCAAGCCTCTCT-TGTTCCCCCACCATAACCCCTGCAGAGTGATGGGGAGCAGAGGAAAGAGAGGcaaagccttgccctgtggcttccagctgcacagttctggcaggctatttgacctctttgagcctcggtttcctcatctatgaagtgaggctatttccaactgcacagcattgtggcaaggccccgtccagcaca------gacaGGTAAGAGGTGCTCAGCTGGCTTTCCCTTCTC---CCTTCCTTTGGAAAGACAAGACTCG-TGGTGAGAAGTGATGAGAAAT----TCATGTTTTGTGGTGAGTTCTG----AACTGGGTGGTGGCGGGCACTACCGGCCTTTGAAAACACTGGAGAAACACATGGCgtatgttgtactgcgccaagaacattcacagctgtcatctcattgattccttaaaccaccccactatgtaggcagggcctgctgttcccatttcacaggggaggaaattagtgctcaggcacaaggatgtgtccagggtgactgctg--gctggcagcagagctgcgatgagagccc--agtgtcctgactgttcg-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 18000 579 + 73212453 CCTTTGGTGAGTCTGAATGAGGGGCTCCAAGCCTCTCT-TTTTCCCCCACCATAACCCCTGCAGAGTGAtggggagcagaggaaagagaggcaaagccttgccctatggcttccagctgcacagttctggcaggctatttgacctctttcagcctcagtttcctcatctatgaagtgaggctatttccaaccgcacagcattgtagcaaggCCCCATCCAGCACAGAAC--GACAGGTAAGAGGTGCTCAGCTGGCTTTCCCTTCTC---CCTTCCTTTAGAAAGACAAGACTCA-TGGTGAGAAGTGATGAGAAAT----TCATGTTTTGTGGTGAGTTCTG----AACTGGGTGGTGGCGGGCACTACCGGCCTTTGAAAACACTGGAGAAACACATGGCATATGTTgtactgcgccaggaacattcacagctgtcatctcattgattccttaaaccaccccagaatgtaggcagggcctgctgttcccatttcacaggggagaaaattagcgctcaggcacaaggatgtgcccaggcagactgctg--gctggcggcagagctgcaatgagagccc--agtgtcctggcttttcg-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 72643 571 - 81552678 CCTTTGGTGAGTCTGAATGAGGGGCTCCAAGCCTCTCT-TGTTCCCCCACCATAACCCCTGCAGAGTGATGGGGAGCAGAGGAA--AGAGGCAAAGCCTTGCCCTATGGCTTCCAGCTGCACAGTTCT----GgctatttgacctctttgaacctcaatttcttcatctatgaagtgaggCTATTTCCAACTGCACAGCATTGTGGCAAGGCCCCATCCAGCACAGAAC--GACAGGTAAGAGGTGCTCACTTGGCTTTCCTTTCTC---CCTTCCTTTGGAAAGACAAGACTCA-TGGTGAGAAGTGATGAGAAAT----TCATGTTTTGTGGTGAGTTCTG----AACTGGGTGGTGGCGGGCACTACCGGCCTTTGAAAACACTGGAGAAACACATGGCATATGttgtactgtgccaagaacattcacagctgtcatctcattgattccttaaaccaccccaggatgtaggcagggcctgctgttcccatttcacaggggagaaaatcagcgctcaggcacaaggatgtgcccagggtgac--ctg--gctggcgacagagctgcgatgaaagccc--agtgtcctggcttttcc-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 48167 577 + 80904711 CCTTTGTTGAGTCTGAATAAGGGGCTCCAAGCAGCTCT-TGTTCCCCCACTGTAACCCTTGCAGAGTGATGGGGAGCAGAGTAAAGAGAGGcgaaaccttgctctacggcttccagctgcacagttctggcaggctattcgacctctttgagcctcagtttcctcatctatgaagtgaggctgtttccaactgcacagcattgtggcaaagCCCCATCCAGCACAGAACATGACAGATAAGAGGGGCTCAGTCGGCTTTCCCTTCTC---CCTTCCTTTGGAAAGACAAGACTCA-TGGTGAGAAGTGATGAGAAAT----TCATGTTTCGTACTGAGTTCTG----AACTGGGTGGTGGCGGGCACTACCGGCCTTTGAAAACACTGGAGGAACACATGGCATacgttgtactgtgccaagaacattcacagctgtcatctcattgattccttaaaccaccccaggatgtaggcagggcctgctgttcccatttcacaggtgaggaaattagcgctcaggcacaaggatgtgcccagggggactgctg--gctggcggcagagctgcgatgacagccc--agtgtc----ctttttg-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 49087 577 + 80997621 CCTTTGTTGAGTCTGAATAAGGGGCTCCAAGCGGCTCT-TGTTCCCCCACTGTAACCCTTGCAGAGTGATGGGGAGCAGAGTAAAGAGAGGcgaaaccttgctctacggcttccagctgcacagttctggcaggctattcgacctctttgagcctcagtttcctcatctatgaagtgaggctgtttccaactgcacagcattgtggcaaagCCCCATCCAGCACAGAACATGACAGATAAGAGGGGCTCAGTCGGCTTTCCCTTCTC---CCTTCCTTTGGAAAGACAAGACTCA-TGGTGAGAAGTGATGAGAAAT----TCATGTTTCGTACTGAGTTCTG----AACTGGGTGGTGGCGGGCACTACCGGCCTTTGAAAACACTGGAGGAACACATGGCATacgttgtactgtgccaagaacattcacagctgtcatctcattgattccttaaaccaccccaggatgtaggcagggcctgctgttcccatttcacaggtgaggaaattagcgctcaggcacaaggatgtgcccagggggactgctg--gctggcggcagagctgcgatgacagccc--agtgtc----ctttttg-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 59429 577 + 74645514 CCTTTGTTGAGTCTGAATAAGGGGCTCCAAGCCGCTCT-TGTTCCCCCACTGTAACCCTTGCAGAGTGATGGGGAGCAGAGTAAAGAGAGGCCAAACCTTGCTCTAGGGCTTCCAGCTGCACAGTTCTGGCAGGCTATTtgacctctttgagcctcagtttcctcatctatgaagtGAGGCTGTTTCCAACTGCACAGCATTGTGGCAAAGCCCCATCCAGCACAGAACATGACAGATAAGAGGGGCTCAGTCggccttcccttctc---ccttcctttggAAAGACAAGACTCA-TGGTGAGAAGCGATGAGAAAT----TCATGTTTTGTACTGAGTTCTG----AActgggtggtggcaggcactacCGGCCTCTGAAAACACTGGAGAAACACATGGCATACGTTGTACTGTGCCAAGGACATTCACAGCTGCCATCTCATTGATTCCTTAAACCACTCCAGGATGTAGGCAGGGCCTGCtgttcccatttcacaggtgaggaaattaGCGCTCAGGCACAAGGATGTGCCCAGGGTGACTGCTG--GCTGGCGGCAGAGCTGCGATGACAGTCC--AGTGTC----CTTTTTG-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 50613 577 + 75148670 CCTTTGTTGAGTCTGAATAAGGGGCTCCAAGCCGCTCT-TGTTCTCCCACTGTAACCCTTGCAGAGTGATGGGGAGCAGAGTAAAGAGAGGcgaaaccttgctctagggcttccagatgcacagttatggcaggctatttgacctctttgagcctcagtttcctcatctatggagtgaggctgtttccaactgcacagcattgtggcaaagCCCCATCCAGCACAGAACATGACAGATAAGAGGGGCTCAGTCGGCTTTCCCTTCTC---CCTTCCTTTGGAAAGACAAGACTCA-TGGTGAGAAGCGATGAGAAAT----TCATGTTTTGTACTGAGTTCTG----AACTGGCTGGTGGCGGGCACTACCGGCCTTTGAAAACACTGGAGGAACACATGGCATacgttgtactgtgccaagaacattcacagctgtcatctcattgattccttaaaccaccccaggatgtaggcagggcctgctgttcccatttcacaggtgaggaaattagcgctcaggcaccaggatgtgcccagggtgactgctg--gctggcggcagagctgcgatgacagccc--agtgtc----ctttttg-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 865506 574 - 1291538 CCTTTGTTGAGTCTGAATGAGGGGCTCCAAGCCTCTCT-TGTTCCCCCACTGTAACCCCTGCAGAGGGAtggagaccagaggaaacagttgcaaagccttgccct---gcttccagctgcacatttctggcaggctatttgagctctttgagcctcagtttccccatctatgaagtgaaggtatttccaaatgcacagcattgtggcaagACCCCATCCAGCACAGAACTTGACAGGTAAGAGCTTCTCAGTTGGCTTTCCCTTCTC---CCTTCTTTTGGAAAGACCAGACTCA-TGGTGAGAAGTGATGAGAAAT----TCATGTCTCGTGCTGAATTCTG----AACTGGGTGGCGGCA-GCACTACCGGCCTTTGAAAACACTGGAGGAACACATGGCgtatgttgcact-tgccaagaacattcacagctgtcatctcattgatccctt-aaccaccccaggatataggcagggcctgctgttcccacttcacaggtgaggaaattagcactcaggcacaaggatgtgcccagg-tgactgcta--gctggtggcagagctgcggtgagagccc--agtgtcctgactttctg-- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15625162 547 - 61074082 CCTTCCATGAGTGTAAATGAGGGGCCCCAAGCCAGTGTCCCTTCCTCCACCATAACCCCTTGAAAGGGGTGGAGAGGAGAGAGAAGAGA-------CCCTTTCTCATcacttccagctgctacattctgacagatcatttgatctctttgaacct--gttttctcatctgtgaaatggggctaattccaacctaacagcattgtggtgaggCCCCATCTAGCACAGAACATGACAGATCAGAGGTGCCCAGTAGGGTTGGCTTTCTCTTTCTCTCCTCTGGGGAGACAAGACTCACTGGTAAGAAATGATGGAAAACCATATGCTGTTTTGTGGTAAGTTCTGTGCTGactgagcggtgacagtc-----------------------------------------ggtatactgtacctagaccgttcacagcagtcagcgcagtgattccttacatta-gccatgacgtagacaagg-atactgttcccatgttccc-gtgaggaaattaaagctcaggcacactgacttacccacagtgaccaccactgtttgcagcagagctgggattagaaacctaggtgtcctgacttttttcg i canFam3.chr9 I 203 C 0 e mm10.chr11 75797070 1312 + 122082543 I a score=2164251.000000 s hg38.chr17_GL383563v3_alt 122300 619 + 375691 atgcttccactttccctcccttctcccttTCCTCCCCTCCACTACAGAGCTCAGG-GGCTCAGAGCAGAGTTGGAAACACAGGTAAAACCTCGTT-CCCAAAGCTCATCCTGAGGCTTCTTGGACAGGGGAAGCCCAAACTgaggaggaggggaagga--gggaaaaaaaggaggaggaagaggaggacaggaggaggCCAAGAGCCTCAGGGGTTACAGTGGGAATGAA-CCAGCC--GGGGTTCCCTAAAGATAGTCTGAGGTCCTGGTGGGAGAA-ATATTCAGCCTTC-CAAGAGCCAAAGGCCAAGGAAA------------------------------------------------GGACAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGTTCTCATTTCCAGGAATGCTTAAGGGGATTAATCCTTAAATAGGCACAGG--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTACATAATGACGCAGGTATTAAAATA--CAGACGCTGAACTGTCATTTTATCAT-TCctttacta---aggagctgga--gggtgtcgtcatcatcttacagatggggaaactgaggctgcgggaggtcaagtgactagcAAGAGGCAGACTGGAGATGAGA-CCTGGACGTCCTGACCGCTGAGCCTGC-------------C- s panTro4.chr17 120538 619 + 82630442 atgcttccactTTCCCTCCCTTCTCCCTTTCTTCCCCTCCACTACAGAGCTCAGG-GGCTCAGAGCAGAGTTGGAAACACAGGTAAAACCTCGTT-CCCAAAGCTCATCCTGAGGCTTCTTGGACAGGGGAAGCCCAAACTgaggaggaggggaagga--gggaaaacaaggaggaggaagaggaggacgggaggaggCCAAGAGCCTCAGGGGTTACAGTGGGAATGAA-CCGGCC--GGGGTTCCCTAAAGATAGTCTGAGGTCCTGGTGGGAGAA-ATATTCAGCCTTC-CAAGAGCCAAAGGCCAAGGAAA------------------------------------------------GGACAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGTTCTCATTTCCAGGAATGCTTAAGGGGATTAATCCTTAAATAGGCACAGA--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTACATAATGACGCAGGTATTAAAATA--CAGACGCTGAACTGTCATTTTATCAT-TCCTTTACTA---AGGAGCTGGA--GGGtgtcgtcatcatcttacagatggggaaactgaggctgcgggaggtcaagtgactagcAAGAGGCAGACTGGAGATGAGA-CCTGGACGTCCTGACCGCTGAGCCTGC-------------C- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 18579 634 + 73212453 atgcttgcactttccctcccttctgcctttcCTCCCCTCCACTACAGAGCTCAGG-GGCTCAGAGCAGAGTTGGAAACACAGGTAAAACCTTGTT-CCCAAAGCTCATCCTGAGGCTTCTTGGACAGGGGAAGCCCAAACTgaggaggaggagaagga--gggaaaaaaaggaggaggaagaggaggaggggaggaggCCAAGAGCCTCAGGGGGTACAGTGGGAATGAA-CCGGCC--GGGGTTCCCTAAAGATAGTCTCAGGTCCTGGTGGGAGAA-ATATTCAGCCTTC-CAAGAGCCAAAGGCCAAGGGAA------------------------------------------------GGACAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGTTCTCATTTCCAGGAATGCTTAAGGGGATTAATCCTTAAATAGGCACAGA--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTATATAATGATGCAGACATTAAAATA--CAGATGCTGAACCGTCATTTTATCAT-TCCTTTACTa---aggagctagagggggtgtcgtcatcatcttacagatgggaaaactgaggctgcaggaggtcaagtgactagcaagaggcagactggagatgaga-cctggacgtcctgacctctgagcctgcgcccttttaacatc- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 73214 615 - 81552678 atgcttccactttccctcccttctcccTTTCCTCCCCTCCACTACAGAGCTCAGG-GGCTCAAGGAAGAGTTGGAAACACAGGTAAAACCTTGTT-CCCAAAGCTCGTCCTGAGGCTTCTTGGACAGGGGAGGCCCAAACTgaggaggaggggaagga--ggggaaa-aaggaggaggaaggggaggaggggaggaggCCAAGAGCCTCAAGGGTTACAGTGGGAATGAACCCGGCCTGGGGGTTCCCTAAATATAGTCTGAGGTCCTGGTGGGAGAA-ATATTCAGCCTTC-CAAGAGCCA------AAGGGAA------------------------------------------------GGACAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGTTCTCGTTTCCAGGAATGCTTAAGGGGATTAATTCTTAAATAGGCACAGA--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTATATAATGACACAGGTATTAAAAta--cagacattgaactgtcattttatcat-tcctttacta---aggaactaga--gggtgtcgtgatcatcttacagacggggaaactgaggctgtgggaggtcaagtgactagcaagaggtAGACTGGGGATGAGA-CCTGGACGTCCTGACCGCTGAGTCTGC-------------C- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 48744 634 + 80904711 aTGCTTCCACTTTCCCTCCCTTCTCCCTCTCCTCCCCTCCACTACAGAGCTCAGA-GGCTCAGAGCAGAGTTGGAAACACAGGTAAAACCTTGTT-CCCAAAGCTCATCCTGAGGCTTCTTGGACATGGGAAGCCCAAACTgaggaggaggggaaggagggggaaaaaaaggaggaggaagagaaggagggaaggaggCCAAGAGCCTCAGGGGATACAGTGGGAATGA--CTGGCCTGGGGGTTCCCTAAAGATAGTCTGAGGTCCTGGTGGGAGAA-ATATTCAGCCTTC-CAAGAGCCAAAGGCCAAGGGAA------------------------------------------------GGACAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGCTCTCATTTCCAGGAATGCTTAAGGGGATTAATCCTTAAATAGGCACAGA--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTATATAATAACACAGGTATTAAAATG--CAGAAGCTGAGCTGTCATTTTATCAT-TCCTTTACTA---AGGAGCTACA--GGGtgtcgtcatcatcttacagttggggagactgaggctgcgggaggtcaagtgactagcaagaggcagactggggatgaga-cctggacatcctgacccctgagccttg-cccttttaacATC- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 49664 634 + 80997621 atgcttccacttgccctcccttctcCCTCTCCTCCCCTCCACTACAGAGCTCAGA-GGCTCAGAGCAGAGTTGGAAACACAGGTAAAACCTTGTT-CCCAAAGCTCATCCTGAGGCTTCTTGGACATGGGAAGCCCAAACTgaggaggaggggaaggagggggaaaaaaaggagaaggaagagaaggagggaaggaggCCAAGAGCCTCAGGGGATACAGTGGGAATGA--CTGGCCTGGGGGTTCCCTAAAGATAGTGTGAGGTCCTGGTGGGAGAA-ATATTCAGCCTTC-CAAGAGCCAAAGGCCAAGGGAA------------------------------------------------GGACAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGCTCTCATTTCCAGGAATGCTTAAGGGGATTAATCCTTAAATAGGCACAGA--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTATATAATAACACAGGTATTAAAATG--CAGAAGCTGAGCTGTCATTTTATCAT-TCctttacta---aggagttaca--gggtgtcgtcatcatcttacagttggggagactgaggctgcaggaggtcaagtgactagcaagaggcagactggggatgaga-cctggacatcctgacccctgagccttg-cccttttaacATC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 60006 634 + 74645514 ATGCTTCcactttccctcccttctccctctcctcccctccactACAGAGCTCAGA-GGCTCAGAGCAGAGTTGGAAACACAGGTAAAACCTTGCT-CCCAAAGCTCATCCTGAGGCTTCTTGGACATGGGAAGCCCAAactgaggaggaggggaaggagggggaaaaaaaggaggaggaagagaaggagggaaggaggccaAGAGCCTCAGGGGATACAGTGGGAATGA--CCGGCCTGGGGGTTCCCTAAAGATAGTCTGAGGTCCTGGTGGGAGAA-ATATTCATGCTTC-CAAGAGCCAAAGGCCAAGGGAA------------------------------------------------GGACAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGCTCTCATTTCCAGGAATGCTTAAGGGGATTAATCCTTAAATAGGCACAGA--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTATATAATAACACAGGTATTAAAATA--CAGATGCTGAGCTGTCATTTTATCAT-TCCTTTGCTA---AGGAGCTACA--GGGTGTCGTCATCATCTTACagttggggagactgaggctgcggGAGGTCAAGTGACTAGCAAGAGGCAGACTGGGGATGAGA-CCTGGACATCCTGACCCCTGAGCCTTG-CCCTTTTAACATC- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 51190 633 + 75148670 atgcttccactttccctcccttctcCCTTTCCTCGCCTCCACTACAGAGCTCAGA-GGCTCAGAGCAGAGTTGGAAACACAGGTAAAACCTTGTT-CCCAAAGCTCATCCTGAGGCTTCTTGGACATGGGAAGCCCAAACTgaggaggagaggaaggagggggaaaaaaaggaggaggaagacaaggaaggaAAGAGGCCAAGAGCCTCAGGGGATACAGTGGGAATGA--CTGGCCTGGGGGTTCCCTAAAGATAGTCTGAGGTCCTGGTGGGAGAA-ATATTCAGGCTTC-CAAGGGCCAAAGGCCAAGGGAA------------------------------------------------GGATAGAAGAGCCTGGAAGGGCAGCCTGGCACAGAGGGGCTCTCATTTCCAGGAATGCTTAAGGGGATTAATCCTTAAATAGGCACAGA--------------------------GTGACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTATATAATAACACAGGTATTAAAATA--CAGACGCTGAGCTGTCATTTTATTAT-TCctttacta---aggagctaca--gggtgtcgtcatcatcttacagttggggagactgaggctgtgggaggtcaagtgactagcaagaggcagactggggatgaga-cctggacatcctgacccctgagccttg--tcttttaacATC- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 866080 644 - 1291538 gtccttccactTTCCCTCCCTTCTCCCTTTTCTCCTCTCTTCTACAGAGCTCAGG-GGCTCAGAGCAGAGTTGGAAACGCAGGTAAAACCTTGTG-CCCAAAGCTCATCCTGAGGCTTCTTGAACAGGGGAAGCTCAAACTgaggagg---ggaagga--agaacaaagaagaggaggaagaggagga-ggtaggaggCCAACAGCCTCAGGGGTTACAGTGGAAATGAA-CCAGCCTG---------------TAGTCTGAGGTCCTGGTGGGAGAA-AAATTCAGCCTTC-CAAGAGCCAAAGGCCAAGGGAAGGGACAAGAAGAGCCTGGAAGGGCAGCCTGGTGCAGAGGGGAGGGAAGGGACAGAAGAGCCTGGAAGGGCAGCCTGGTGCAGAGGGGTTCTCATTTCCGGGAATGCTTA----GATTAATCCTTAAATAGGC----------------------------------ACTTTTTCTGTGCCAGAGGTGGCTGCATCACAAAATGATTATATAATGATACAGGTATTAAAATA--CAGACGCTGAACCAtcattttatca------ttacta---gggagctaga--gggtgctgtcattgtcttactgatggggagactgaggctttc-gaggtcaagtgactaggaagaggtagcgtagggatgaga-cctggacatcctgaccaccaagcctgt-gccttttAACATC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75798382 573 + 122082543 ATGTTTCCATTCTCCCTTCC-CCTGCCTTTCCTTCCTCACCCTGCAGAACTGAAGCGACTCAGAGTGGAGCTGGCTGCCCAGGTGAAGCCCTGTT-CTCAAGGATCCCCATGAGGCTTCTTGGATGGGGACAGCC----------------AGATGGA-------------GTGGGGGTAGGGGTTGA------GGGGCCAAGA--TTCAGGGATTACAG-GAGAATAAG-CTGGCCTGG--------------TAGTCTGG----CTGCTGGGGGAGCCCACTCAGCCTTCTTGAGGGTCTGAGTCTAAGGAGA-------------------------------------------------GAGATAAGAACCTGG--------------TCTCAGAGGCTGTCGTTG-TAGGAGGACCGAAGGGGCTTAGACCTTacatacacacacacacacacacacacacacacacacacTGTGACTTTTCCTATGTCAGACGTGTCTACATCATAAAATGATTATGCTGTGACATGGGTATCAAAAAAAGCAGACA----------GTCTCCACATGTCCTTGGGTGGGTGGGGACAAGA--AGAGGTGGT-AccatcttgcaaatagggacactgaagcttcaagtgatcaagtgtctggcAACTGG--GACTGGATATAGGAGCCTGGTTATACCAACTCCTGACCCTGT-G------------- i mm10.chr11 I 1312 I 74 s canFam3.chr9 15625709 604 - 61074082 aagcttccacgtccccttcctctgcCTCTTCCTTCTCACCCCTTCAAAGCTTGAG-GGGTCAAAGCAGAGCTGGAAACGCAGGTAAAATGCTGTTCCCCAGAGCTACTCCTGA-GCTTCTGGGGTGGAGACAGCCCAAATTAAGGTGGAAAGGGAGGG--GAAGAATTAAGGAGGAAGAGGCGGGGTAGAGGGAAGGGCCGGTAGCCTCAGGGCTTACACTGGGAAAGAG-CGGGGCTGGCAGCTCCCCAAAGACTATTTGGGGTCCTGCTAGGAGAA-GAATTCAGCCTTC-CAGGAGTCTAAGGCCAAGGGAA------------------------------------------------GGACTAGAGAGCCTGGAA----------GCCTAGTGGGTTTCCAGTTTCTGGGCATGCTTAAGGGGATTCGTCCTTAAATAGGCATAGA--------------------------GTGACTT---CTGTGCCACAGGTGGCTGCTTCACAAAGTGATTATGTAATGATACAGGTATTAAAATA--CAGACACTGAACCATCATTTCGTAAT-TTCTTCACTT---gagaa--aga--gagtgctgttaccattttacagttggggaaaaggaggcttcaggaagtcaggt---------------gactGGGAATGAGA--GTGGATATCGTGACCCCTGACCCTGTGCCCTTTTGACATCA i canFam3.chr9 C 0 C 0 a score=140324.000000 s hg38.chr17_GL383563v3_alt 122919 67 + 375691 ----------------------------------------AAG-------------------------------------------GCCCTGTA------------------------------------------------------------------------------------------------------------------------------------CCTGTGTTCACC----------------GAGAGCTGGCCGCTCCctcctggcctctt----gtcctatgggtctgg s panTro4.chr17 121157 67 + 82630442 ----------------------------------------AAG-------------------------------------------GCCCTGTA------------------------------------------------------------------------------------------------------------------------------------CCTGTGTTCACC----------------GAGAGCTGGCCGCTCCCTCCTGGCCTCTT----GTCCTGTGGGTCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19213 67 + 73212453 ----------------------------------------aag-------------------------------------------gccctgtg------------------------------------------------------------------------------------------------------------------------------------cctgtgttcacc----------------aagagctggctgctccCTCCTGGCCTCTT----GTCCTGTGGGTCTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 73829 67 - 81552678 ----------------------------------------AAG-------------------------------------------GCCCTGTG------------------------------------------------------------------------------------------------------------------------------------CCTCTGTTCACC----------------AAGAGCTGGCTGCTCCCTCCTGGCCTCTT----GTCCTGTGGGTCTGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 49378 67 + 80904711 ----------------------------------------AAG-------------------------------------------GCCCTGTG------------------------------------------------------------------------------------------------------------------------------------ACTGTGTTCACC----------------GAGAGCTGGCTGCTCCCTCCTGGCCGCTT----CTCTTGGGGGTCTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50298 67 + 80997621 ----------------------------------------AAG-------------------------------------------GCCCTGTG------------------------------------------------------------------------------------------------------------------------------------ACTGTGTTCACC----------------GAGAGCTGGCTGCTCCCTCCTGGCCGCTT----CTCTTGGGGGTCTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 60640 67 + 74645514 ----------------------------------------AAG-------------------------------------------GCCCTGTG------------------------------------------------------------------------------------------------------------------------------------ACCGTGTTCACT----------------GAGAGCTGGCTGCTCCCTCCTGGCCTCTT----CTCTTGGGGGTCTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 51823 67 + 75148670 ----------------------------------------AAG-------------------------------------------GCCCTGTG------------------------------------------------------------------------------------------------------------------------------------ACTGTGTTCACC----------------GAGAGCTGGCGGCTCCCTCCTGGCCTCTT----CTCTTGTGGGTCTGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 866724 52 - 1291538 ----------------------------------------AAG-------------------------------------------GCCCTGTG------------------------------------------------------------------------------------------------------------------------------------CCTGTGTTCACT----------------GAGAGCTGGCC---------------CTT----ATCCTGTGGGTCTGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15626313 301 - 61074082 AAGGTATACCCCTGgggttgcctgggtggctcagttggttaagcatttgcctctggcttgggtcatgagcgagatcctgggattgagccctgtgtgtgggagggttttctactcggaggggtgtctgcttatgcctctccctctgcccctcttccccacttgtgctcactttctctttaataaataaataaaatcttGTTTGTTTGTTTGTTTATAAAGGTATACCTCTGTATTCACTGCGGATGGGGACAGGAGGGGGCTGACCTCTTCCT-CTGCCCTCTTTGACCTTCTGTGGGTCTGG i canFam3.chr9 C 0 I 1 e mm10.chr11 75798955 74 + 122082543 I a score=1784349.000000 s hg38.chr17_GL383563v3_alt 122986 525 + 375691 tttttggaggatcggctcacggctcttggctctgcaggagctggctcttggGGAGGGCTTTGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCAAGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCTACCCTTTGGCAGGTGGCAGAGTTGAAATCCACTCT-AGGTCTGAATTTGCCCAGCTCTGAGCCCAGCTGAAATGGGGTAGGGCCTCCCCGAGGGATAGAAGTGGA----TAGAAGTGGTGTTATCTGGGCAAGTGTCCACTTTCtagaaagagcataggtcagggagt-aggcagacgtagagtcaaaag-tcag-gtgtgcctcctcctaagcgtgccggactttgggcaagttgtttaacttaggccc--tgggtctcatctgc--aatgggggagaataagaac-aaccttgtgtgagttaaaggtgaggatgggtatacagtgcttagcacagtgcccagtgtgcaactggcactcagggaattgtgattctgttGCCCCTG s panTro4.chr17 121224 525 + 82630442 TTTTTGGAGGATCGGCTCACGGCTCTTGGCTCTGCAGGAGCTGGCTCTTGGGGAGGGCTTTGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCAAGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCTACCCTTTGGCAGGTGGCAGAGTTGAAATCCACTCT-AGGCCTGAATTTGCCCAGCTCTGAGCCCAGCTGAAATGGGGTAGGGCCTCCCCAAGGGATAGAAGTGGA----TAGAAGTGGTGTTATCTGGGCAAGTGTCCACTTTCtagaaagagcatagatcagggagt-aggcagacgtagagtcaaaag-tcag-gtgtgcctcctcctaagcgtgccggactttgggcaagttgtttaacttaggccc--tgggtctcatctgc--aatgggggagaataagaac-aaccttgtgtgagttaaaagtgaggatgggtatacagtgcttagcacagtgcccagtgtgcaactggcactcagggaattgtgattctgttGCCCCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19280 525 + 73212453 TTTTTGGAGGATCAGCTCACGGCTCTTGGCTCTGCAGGAGCTGGCTCTTGGGGAGGGTTCTGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTAAGCGTGGAGCCAGGGAACCCAAGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCTACCCTTTGGCAGATGGCAGAGTTGAAATCCACTCT-AGGTCTGAATTTGCCCAGCTCTGAGCCCAGCTGAAATGGGGTGGGGCCTCCCCAAGGGATAGAAGTGGA----TAGAAGTGGTGTTATCTGGGCAAGTGTCCACTTTCtagaaacagcataggtcagagagt-aggcagacgtagagtcaaaag-tcag-gtgtgcctcctcctaagggtgccggactttgggcaagttgcttaacttaggccc--ttggtctcatctgc--aatgggggagaataagaac-aaccttgtgtgagttaaaggtgaggatgggtatacagtgcttagcacagtgcccagtgtgcaactggctctcagggaattgtgattctgttGCCCCCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 73896 515 - 81552678 TTTTTGGAGGATCAGCTCACGGCTCTTGGCTCTGCAGGAGCTGGCTCTTGGGGAGGGTCTGGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCCAGGATGCCCACTGGAGAAACACATGGTATGTTGGGGTCTAGCCTTTGGCAGGTGGCAGAGTTGAAATCCACTCT-AGGTCTGAATTTGCCCAGCTCTGAGCCCAGTTGAAATGGGGTGGGGCCTCCCCAAG----------GGA----TAGAAGTGGTGTTATCTGGGCAAGTGTGCACTTTCtagaaagagcataggtcagggagt-aggcagacttagagtcagaag-tcag-gtgtgcttccccctaagcgtgccggactttgggaaagttgcttaacttatgccc--tgggtctcatctgc--aatgggggagaataagaac-aaccttgtgtgagtgaaaggtgaggatgggtatacagtgcttggcacagtgctcagtgtgcgactggcactcaaggaattgtgattctgttGCCCCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 49445 501 + 80904711 TTTTTGGAGGATCAGCTCATGGCTCTTGGCTCTGCAGGAGCTGGCTCTCGGGGAGGGTTTGGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCCAGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCCAGCCTTTGGCAGGTGGCAGAGTTGAAATCCACTCT-AGGTCTGAATTTGCCCAGCTCCGAGCCCAGCTGAAATGGGGTGGGGCCTCCCCAAG----------GGA----CAGAAGTGGTGTTATCTGGGCAGGTGTCTACTTTCtagaaagagcataggtcacggagt-aggcagacttagaatcaaaag-tcag-gggagcctcctcctaagtgtgccagactttgggcaagttgcttaac--aggccc--tgggtctcatcagc--aatgggggagaataacaac-aagcttgtgtgagttaaaggcgaggatgggta------------cacagtgcccagtgtgcaactggcgctcagggaattgtgattctgctGCCCCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50365 501 + 80997621 TTTTTGGAGGATCAGCTCATGGCTCTTGGCTCTGCAGGAGCTGGCTCTCGGGGAGGGTTTGGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCCAGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCCAGCCTTTGGCAGGTGGCAGAGTTGAAATCCACTCT-AGGTCTGAATTTGCCCAGCTCTGAGCCCAGCTGAAATGGGGTGGGGCCTCCCCAAG----------GGA----CAGAAGTGGTGTTATCTGGGCAGGTGTCTACTTTCtagaaagagcataggtcacggagt-aggcagacttagaatcaaaag-tcag-gggagcctcctcctaagtgtgccagactttgggcaagttgcttaac--aggccc--tgggtctcatcagc--aatgggggagaataataac-aagcttgtgtgagttaaaggcgaggatgggta------------cacagtgcccagtgtgcaactggcgctcagggaattgtgattctgctGCCCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 60707 502 + 74645514 TTTTTGGAGGATCAGCTCACGGCTCTTGGCTCTGCAGGAGCTGGCTCTCGGGGAGGGTTTGGAAGAAGTTAGGTGGCGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCCAGGATGCCCACTGGAGAAACACATGGCATGTTGGGGTCCAGCCTTTGGCAGGTGGCAGAGTTGAAATCCACTCT-AGGTCTGAATTTGCCCAGCTCTCAGCCCAGCTGAAATGGGGTGGGGCCTCCCCAAG----------GGA----CAGAAGTGGTGTTATCTGGGCAGGTGTCTACTTTCTAGAAAGAGCATAGGTCACGGAGT-AGGCAGACGTAGAGTCAAAAG-TCAG-GGGTGCCTCCTCCTAAGCGTGCcagactttgggcaagttgcttaac--agGCCC--TGGGTCTCATCAGC--AATGGGGGAGAATAAGAACAAAGCTTGTGTGAGTTAAAGGCGAGGATGGGTA------------CACAGTGCTCAGTGTGCAACTGGCGCTCAGGGAATTGTGGTTCTGCTGCCCCTG i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 51890 503 + 75148670 TTTTTGGAGGATCAGCTCATGGCTCTTGGCTCTGCAGGAGCTGGCTTTTGGGGAGGGTTTGGAAGAAGTCAGGTGGAGGGCCCAGCCTCCTAAGCATGGAGCCAGGGAACCCCAGGATGCCCACTGGAGAAACACATGGTATGTTGGGGTCCAGCCTTTGGCAGGTGGCAGAGTTGAAATCCACTCT-AGGTCTGAATTTGCCCAGCTCTGAGCCCAGCTGAAATGGGGTGGGGCCTCCCCAAG----------GGA----CAGAAGTGGTGTTATCTGGGCAGGTGTCTACTTTCtagaaagcgcataggtctgggagt-aggcagacttagagtcaaaag-tctg-gtgtgcctcctcctaagcgtgccagactttgggcaagttgcttaacttaggccc--tgggtctcatcagc--aatgggggagaataagaac-aagcttgtgtgagttaaaggcgaggatgggta------------cacagtgcccagtgtgcaactggcgctcagggaattgtgattctgctGCCCCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 866776 493 - 1291538 GTTTTGGAGAATGAGCTCATGGCTCTTGGCTCTGCAGGACCTGGCTTGTGGGGAGGGTTTGGAAGAAGTCAGGTGGAGGACCCAGCAT-CTAAGCATGGAGCCAGGAAACCCCAGTGTGCCCACTGGAGAAACATGTGGCATG-TGGGGGCCAGCCCTTGGCAGGTAGCAGAGTTGAAATCCATGCT-AGGTCTGAATTTGCCCAGCTCTAAGTCCAGCTGACAT-GGGTGGGGACTCCCCAAG----------GGA----CAGAAGTGGTGTTATCTGGGCAGACGTTCACTTTTtagaaagagcataggtcaagcagt-aggcacgcttagggtcagcag-tcag-gcgtgcctcctctcaa--ctgcctgac--tgggcaagtggcttaacgtaggccc--tgggtcgcatctgc--aatgggggag---aagaac-aaccttgtgtgagttagaggccaggatgggca------------cacagtgcccagtgtgtacatggcactcagGGAATTGTGGTTCTGCTGCCCCTG i calJac3.chrUn_GL286409 C 0 I 4 s mm10.chr11 75799029 439 + 122082543 TTTCTGGAAGAGCAGCTCACAATTCTCCGCCCTGTAGGAGCTAGCTCTTAGGAAAAATCTAGAAGAAGTGGGGAAAAGGTCTTAGCTTT---------GAGCCAGGGAACCCTAAGATACCCGCTGAAGAGA----TGGTATGT---GGACCAGGCTCTGGTAGCTGGCAGAATGAAGGCCCATTCT-GAGTCGGAGTTTGATCACTCATGAACCCTGCTGACATGGGGTGGGACCCCACAGAG----------GGAGGTGCGGAAGTACTGTCATCCAGAGAAAAGTCCATTTTCtggaaagaccaagggttaggactg-agacagacttggagtcgaaagctccg-gtcttccggcccttgactgtgcctgactttgtgtgattggcttC----AGTCC--------------------------GAGATTTAGAAG-GAATCTGGATA----------GAAGATGCCTA-----------GCACACTACCTGGCAGGCAGTCGGCA------------------TGCTTGCCCTG i mm10.chr11 I 74 C 0 s canFam3.chr9 15626615 484 - 61074082 TTTTTGGAGCATCTACTCACAGCTTTTGACTCTGCAGGTGCTGGCTCTCAG--AGGGTCTGGAAGAAGT---GGGGAGGGCCCAGCCTCCAAAGCACTGAGTCAGGGAATCCTGAGATGTTCCTTGGAAAAAGAGGTGGCATATGTAGGGTCAACCTCTGGCAGGTGGCAGAGTGGAGAGCCACTCTGAGGTCTGAGTTCCTCCAGCTATGAGCCCCAGTGAGGTGG---------------------------GGG----TAGAATTGGTGCTATCTGGGCAGGTATCCATCTTCtagaaagagtatgggctggagaatcaggcaaatttggatccaaaag-ccagtgtctcccagctcct----gtgtctgactttgggcaagttgctgaacttaggcccagtcagtcccactggtggaatgggggaggccacggac-agttttctgagagatgctgatgaggacggata------------gaaagtgcctggtgtgcaaccggcactcagtcactggtaattctcttGCCCCTG i canFam3.chr9 I 1 C 0 a score=7788.000000 s hg38.chr17_GL383563v3_alt 123511 3 + 375691 CCT s panTro4.chr17 121749 3 + 82630442 CCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19805 3 + 73212453 CCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 74411 3 - 81552678 CCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 49946 3 + 80904711 CCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50866 3 + 80997621 CCT i macFas5.chr16 C 0 I 3 s chlSab2.chr16 52393 3 + 75148670 CCT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75799468 3 + 122082543 TCT i mm10.chr11 C 0 I 1 s canFam3.chr9 15627099 3 - 61074082 CCG i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 867269 4 - 1291538 I e papAnu2.chr16 61209 1 + 74645514 I a score=4438.000000 s hg38.chr17_GL383563v3_alt 123514 3 + 375691 TCC s panTro4.chr17 121752 3 + 82630442 TCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19808 3 + 73212453 TCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 74414 3 - 81552678 TCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 49949 3 + 80904711 TCC i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 52396 3 + 75148670 TCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75799472 2 + 122082543 TC- i mm10.chr11 I 1 I 1 s canFam3.chr9 15627102 3 - 61074082 TCC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 867269 4 - 1291538 I e papAnu2.chr16 61209 1 + 74645514 I e macFas5.chr16 50869 3 + 80997621 I a score=3584.000000 s hg38.chr17_GL383563v3_alt 123517 3 + 375691 TGG s panTro4.chr17 121755 3 + 82630442 TGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19811 3 + 73212453 TGG i ponAbe2.chr17 C 0 I 3 s nomLeu3.chr19 74417 3 - 81552678 TGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 50872 3 + 80997621 TGG i macFas5.chr16 I 3 C 0 s chlSab2.chr16 52399 3 + 75148670 TGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75799475 2 + 122082543 CG- i mm10.chr11 I 1 C 0 s canFam3.chr9 15627105 3 - 61074082 TGG i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 867269 4 - 1291538 I e papAnu2.chr16 61209 1 + 74645514 I e rheMac3.chr16 49952 0 + 80904711 C a score=6111.000000 s hg38.chr17_GL383563v3_alt 123520 3 + 375691 TGC s panTro4.chr17 121758 3 + 82630442 TGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 74420 3 - 81552678 TGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 50875 3 + 80997621 TGC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 52402 3 + 75148670 TGC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75799477 3 + 122082543 TGC i mm10.chr11 C 0 C 0 s canFam3.chr9 15627108 3 - 61074082 TGC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 867269 4 - 1291538 I e papAnu2.chr16 61209 1 + 74645514 I e rheMac3.chr16 49952 0 + 80904711 C e ponAbe2.chr17 19814 3 + 73212453 I a score=12404.000000 s hg38.chr17_GL383563v3_alt 123523 10 + 375691 AAACCGTCCC s panTro4.chr17 121761 10 + 82630442 AAACCGTCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19817 10 + 73212453 AAACCGTCCC i ponAbe2.chr17 I 3 C 0 s nomLeu3.chr19 74423 10 - 81552678 AAACCGTCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 49952 1 + 80904711 ---------T i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50878 10 + 80997621 AAACCGTCCT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 52405 10 + 75148670 AAACCGTCCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75799480 4 + 122082543 ATAC------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15627111 10 - 61074082 AAACCATCTC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 867269 4 - 1291538 I e papAnu2.chr16 61209 1 + 74645514 I a score=-357.000000 s hg38.chr17_GL383563v3_alt 123533 9 + 375691 ATTGCAAAA s panTro4.chr17 121771 9 + 82630442 ATTGCAAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19827 9 + 73212453 AGTGCAAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 74433 9 - 81552678 GGTGCAAAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 49953 2 + 80904711 GG------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50888 9 + 80997621 GGTGCAAAC i macFas5.chr16 C 0 C 0 s canFam3.chr9 15627121 3 - 61074082 ----CAT-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75799484 0 + 122082543 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e papAnu2.chr16 61209 1 + 74645514 I a score=7110.000000 s hg38.chr17_GL383563v3_alt 123542 5 + 375691 CTTCC s panTro4.chr17 121780 5 + 82630442 CTTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19836 5 + 73212453 CTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 74442 5 - 81552678 CTTCC i nomLeu3.chr19 C 0 T 36 s macFas5.chr16 50897 5 + 80997621 CTTCC i macFas5.chr16 C 0 T 30 s papAnu2.chr16 61210 5 + 74645514 CTTCC i papAnu2.chr16 I 1 C 0 s canFam3.chr9 15627124 1 - 61074082 ----C i canFam3.chr9 C 0 C 0 e mm10.chr11 75799484 0 + 122082543 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e rheMac3.chr16 49955 0 + 80904711 C a score=2865.000000 s hg38.chr17_GL383563v3_alt 123547 2 + 375691 TG s panTro4.chr17 121785 2 + 82630442 TG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19841 2 + 73212453 TG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 50872 2 + 80997621 TG i macFas5.chr16 T 30 C 0 s papAnu2.chr16 61215 2 + 74645514 TG i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15627125 2 - 61074082 TG i canFam3.chr9 C 0 C 0 e mm10.chr11 75799484 0 + 122082543 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e rheMac3.chr16 49955 0 + 80904711 C e nomLeu3.chr19 74447 36 - 81552678 T a score=32819.000000 s hg38.chr17_GL383563v3_alt 123549 37 + 375691 GTGCAAATCGTCGTGGTGCAAACCTTCCTGGTGCAAA s panTro4.chr17 121787 37 + 82630442 GTGCAAATCGTCGTGGTGCAAACCTTCCTGGTGCAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19843 37 + 73212453 GTGCAAATCGTCCTGGTGCAAACCTTCCTGGTGCAAA i ponAbe2.chr17 C 0 T 66 s macFas5.chr16 50874 37 + 80997621 GTGCAAACCGTCCTGGTGCAAACCTTCCTGGTGCAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61217 37 + 74645514 GTGCAAACCGTCCCGGTGCAAACCTTCCTGGTGCAAA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75799484 0 + 122082543 C e canFam3.chr9 15627127 0 - 61074082 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e rheMac3.chr16 49955 0 + 80904711 C e nomLeu3.chr19 74447 36 - 81552678 T a score=3163.000000 s hg38.chr17_GL383563v3_alt 123586 15 + 375691 TCG--------------------------------TCGTGGTGCAAA s panTro4.chr17 121824 47 + 82630442 TCGTCGTGGTGCAAACCTTCCTGGTGCAAAAATCATCGTGGTGCAAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 50911 15 + 80997621 TCG--------------------------------CCCTGGTGCAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61254 15 + 74645514 TCG--------------------------------CCCTGGTGCAAA i papAnu2.chr16 C 0 T 60 e mm10.chr11 75799484 0 + 122082543 C e canFam3.chr9 15627127 0 - 61074082 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e rheMac3.chr16 49955 0 + 80904711 C e nomLeu3.chr19 74447 36 - 81552678 T e ponAbe2.chr17 19880 66 + 73212453 T a score=2910.000000 s hg38.chr17_GL383563v3_alt 123601 3 + 375691 CCT s panTro4.chr17 121871 3 + 82630442 CCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 74411 3 - 81552678 CCT i nomLeu3.chr19 T 36 C 0 s macFas5.chr16 50926 3 + 80997621 CCT i macFas5.chr16 C 0 T 60 s papAnu2.chr16 61209 3 + 74645514 CCT i papAnu2.chr16 T 60 C 0 e mm10.chr11 75799484 0 + 122082543 C e canFam3.chr9 15627127 0 - 61074082 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e rheMac3.chr16 49955 0 + 80904711 C e ponAbe2.chr17 19880 66 + 73212453 T a score=5820.000000 s hg38.chr17_GL383563v3_alt 123604 6 + 375691 TCCTGG s panTro4.chr17 121874 6 + 82630442 TCCTGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 74414 6 - 81552678 TCCTGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 50869 6 + 80997621 TCCTGG i macFas5.chr16 T 60 C 0 s papAnu2.chr16 61212 6 + 74645514 TCCTGG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75799484 0 + 122082543 C e canFam3.chr9 15627127 0 - 61074082 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e rheMac3.chr16 49955 0 + 80904711 C e ponAbe2.chr17 19880 66 + 73212453 T a score=46945.000000 s hg38.chr17_GL383563v3_alt 123610 27 + 375691 TGCAAACCGTCCCAGTGCAAAACTTCC s panTro4.chr17 121880 27 + 82630442 TGCAAACCGTCCCAGTGCAAAACTTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19814 27 + 73212453 TGCAAACCGTCCCAGTGCAAAACTTCC i ponAbe2.chr17 T 66 C 0 s nomLeu3.chr19 74420 27 - 81552678 TGCAAACCGTCCCGGTGCAAAACTTCC i nomLeu3.chr19 C 0 I 2942 s rheMac3.chr16 49955 27 + 80904711 TGCAAACCGTCCCGGTGCAAACCTTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50875 27 + 80997621 TGCAAACCGTCCTGGTGCAAACCTTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61218 27 + 74645514 TGCAAACCGTCCCGGTGCAAACCTTCC i papAnu2.chr16 C 0 C 0 s mm10.chr11 75799484 9 + 122082543 -----ACCATCCTA------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15627127 0 - 61074082 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C a score=21194.000000 s hg38.chr17_GL383563v3_alt 123637 16 + 375691 TGGTGCAAATCGTCCT s panTro4.chr17 121907 16 + 82630442 TGGTGCAAATCATCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19841 16 + 73212453 TGGTGCAAATCGTCCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 49982 16 + 80904711 TGGTGCAAATCGCCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50902 16 + 80997621 TGGTGCAAATCGCCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61245 16 + 74645514 TGGTGCAAATCGCCCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75799493 0 + 122082543 C e canFam3.chr9 15627127 0 - 61074082 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e chlSab2.chr16 52415 0 + 75148670 C e nomLeu3.chr19 74447 2942 - 81552678 I a score=14133.000000 s hg38.chr17_GL383563v3_alt 123653 7 + 375691 GGTGCAA s panTro4.chr17 121923 7 + 82630442 GGTGCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19857 7 + 73212453 GGTGCAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 49998 7 + 80904711 GGTGCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50918 7 + 80997621 GGTGCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61261 7 + 74645514 GGTGCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 52415 7 + 75148670 GGTGCAA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75799493 0 + 122082543 C e canFam3.chr9 15627127 0 - 61074082 C e calJac3.chrUn_GL286409 867269 4 - 1291538 I e nomLeu3.chr19 74447 2942 - 81552678 I a score=55684.000000 s hg38.chr17_GL383563v3_alt 123660 26 + 375691 ACCTTCCTGATGCAAACTGTCATTGC s panTro4.chr17 121930 26 + 82630442 ACCTTCCTGATGCAAACTGTCATTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19864 26 + 73212453 ACCTTCCTGGTGCAAACTGTCATTGC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50005 26 + 80904711 ACCTTCCTGGTGCAAACTGTCATTGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50925 26 + 80997621 ACCTTCCTGGTGCAAACTGTCATTGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61268 26 + 74645514 ACCTTCCTGGGGCAAACTGTCATTGC i papAnu2.chr16 C 0 M 410 s chlSab2.chr16 52422 26 + 75148670 ACCTTCCTGGTGCAAACTGTCATTGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867273 26 - 1291538 ACCTTCCTGGTGCAAACCTTCATTGC i calJac3.chrUn_GL286409 I 4 C 0 s mm10.chr11 75799493 1 + 122082543 -----------------------T-- i mm10.chr11 C 0 C 0 e canFam3.chr9 15627127 0 - 61074082 C e nomLeu3.chr19 74447 2942 - 81552678 I a score=6441.000000 s hg38.chr17_GL383563v3_alt 123686 3 + 375691 GCT s panTro4.chr17 121956 3 + 82630442 ACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19890 3 + 73212453 ACT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50031 3 + 80904711 ACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50951 3 + 80997621 ACT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 52448 3 + 75148670 ACT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867299 3 - 1291538 ACT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75799494 3 + 122082543 GCT i mm10.chr11 C 0 C 0 e canFam3.chr9 15627127 0 - 61074082 C e papAnu2.chr16 61294 410 + 74645514 M e nomLeu3.chr19 74447 2942 - 81552678 I a score=828646.000000 s hg38.chr17_GL383563v3_alt 123689 406 + 375691 CCCAGTGCCTGCCTTGATTTCTCTACCAGTGACATGTGGTTGGCTGCTCCCTGTCTGCTGCCAGGACCAGGT----------------------------------GAGAAATGGATGCACTTGCCAAGGCT-GGGCGCTGGCTGGC-----------------------ATGTGTGGGCATCTCTAAGCAGTTGGATATGTCCAAAGGCTCATCAATCATGTTGCCTTCCATTCCCCATGCTGAGGTGGGCAGCTGGGCAGCTGGA------CCAGCCTCTGGCAAAGTTAAGTGGATGGAGTCTGCCCTTGGTCACAGTCCTCAGAAGCCCTGTGCC----CTTGCCTCTCTGCCTTCTGCTTTTCCCAACAAGCTTCTGAGCTTTCTCCCAACTCCCCACAGACCCTCTCAAAGGCTCCTC-CTGTCAAGTGAGATA-cagtgggttctttaaaaaatggtccaggtatctgt s panTro4.chr17 121959 403 + 82630442 CCCAGTGCCTGCCTTGATTTCTCTACCAGTGACATGTGGTTGGCTGCTCCCTGTCTGCTGCCAGGACCAGGT----------------------------------GAGAAATGGATGCACTTGCCAAGGCT-GGGCGCTGGCTGGC-----------------------ATGTGTGGGCATCTCTAAGCAGTTGGATATGTCCAAAGGCTCATCAATCATGTTGCCTTCCATTCCCCATGCTGAGGTGGGCAGCTGGGCAGCTGGA------CCAGCCTCCGGCAAAGTTAAGTGGATGGAGTCTGCCCTTGGTCACAGCCCTCAGAAGCCCTGTGCC----CTTGCCTCTCTGCCTTCTGCTTTTCCCAACAAGCTTCTGAGCTTTCTCCCAACTCCCCACAGACCCTCTCAAAGG---CTC-CTGTCAAATGAGATA-cagtgggttctttaaaaaatggtccaggtatctgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 19893 403 + 73212453 CCCAGTGCCTGCCTCGATTTCTCTACCAGTGACATGTGGTTGGCTGCTCCCTGTCTGCTGCCAGGACCAGGT----------------------------------GAGAAATGGATGCACTTGCCAAGGCT-GGGCGCTGGCTGGC-----------------------ATGTGTGGGCATCTCTAAACAGTTGGATATGTCCAAAGCCTCATCAATCATGTTGCCTTCCATTCCGCATGCTGAGGTGGGCAGCTGGGCAGCTGGA------CCAGCCTCTGGCAAAGTTAAGTGGATGGAGTCTGCCCTTGGTCACAGCCCTCAGAAGCCCTGTGCC----CTTGCCTCTCTGCCTCCTGCTTTTCCCAACAAGCTTCTGAGCTTTCTCCCAACTCCCCACAGACCCTCTCAAAGG---CTC-CTGTCAGATGAGATA-AAGTGggttctttaaaaaatggtcccggtatctgt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50034 403 + 80904711 CCCAGTGCCTGGCTCGATTTCTCTACCAGTGACATGCGGTTGGCTGCTCCGTGTCTGCTGCCAGGACCAGGT----------------------------------GACAAGTGGATGCACTTACCAAGGCT-GGGCGCTGGCTGGC-----------------------ATGTGTGGGCATCTCTAAGCTGTTGGATATGTCCAGAGCCTCATCAATCACGTCGCCTTCCATTCCCAATGCTGAGGTGGGCAGCTGGGCAGCTGGA------TCAGCCTCTGGCAAAGTTAAGTGGATAGAGTCTGCCCTTGGTCACAGCCCTCAGGAGCCCCGTGCC----CTTGCCTCTGTGCCCCCTGCTTTTCCCAACGAGCTTCTGAGCTTTCTCCTAACTCCCCACAGACCCTCTCAAGGG---CTC-CTGTCAAATGAGATT-AAGTGggttctttaaaaaatggtccaggtatctgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 50954 403 + 80997621 CCCAGTGCCTGGCTCGATTTCTCTACCAGTGACATGCGGTTGGCTGCTCCGTGTCTGCTGCCAGGACCAGGT----------------------------------GACAAGTGGATGCACTTACCAAGGCT-GGGCGCTGGCTGGC-----------------------ATGTGTGGGCATCTCTAAGCTGTCGGATATGTCCAGAGCCTCATCAATCACGTCGCCTTCCATTCCCAATGCTGAGGTGGGCAGCTGGGCAGCTGGA------TCAGCCTCTGGCAAAGTTAAGTGGATAGAGTCTGCCCTTGGTCACAGCCCTCAGGAGCCCCGTGCC----CTTGCCTCTGTGCCCCCTGCTTTTCCCAACGAGCTTCTGAGCTTTCTCCTAACTCCCCACAGACCCTCTCAAGGG---CTC-CTGTCAAATGAGATT-AAGTGggttatttaaaaaatggtccaggaatctgt i macFas5.chr16 C 0 C 0 s chlSab2.chr16 52451 403 + 75148670 CCCAGTGCCTGGCTCGATGTCTCTACCAGTGACATGCGGTTGGCTGCTCCGTATCTGCTGCCAGGACCAGGT----------------------------------GATAAGTGGATGCACTTACCAAGGCT-GGGCGCTGGCTGGC-----------------------ATGTGTGGGCATCTCTAAGCTGTTGGATATGTCCAGAGCCTCATCAATCACGTCGCCTTCCATTCCCAATGCTGAGGTGGGCAGCTGGGCAGCTGGA------TCAGCCTCTGGCAAAGTTAAGTGGATAGAGTCTGCCCTTGGTCACAGCCCTCAGGAGCCCCGTGCC----CTTGCCTCTCTGCCCCCTGCTTTTCCCAACAAGCTTCTGAGCTTTCTCCTAACTCCCTACAGACCCTCTCAAAGG---CTC-CTGTCAAATGAGATT-AAGTGGGTTCTttaaaaaatggtccaggtatctgt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867302 392 - 1291538 CT--GCACTCGCCTCGATTTCTC-ACCAGTGAAATGTGGACAGCTGTTCCCTGTCTGCCGCCAGGACCAGGT----------------------------------GAGAAATGGATGTACCTACCAAGGCG-GGGTGCTGGCTGGC-----------------------ATGTGTGGGCATCTCTAAGCAGTTGGACATGTCCAAAGCCTCATCAGTCATGTTGCCTTCCATTCCCCATGCTGGGA--------TGGGCAGCTGGA------CCAGCCCTTGGCAAAGTTAAGTGGATGGAGTCTGCCCTTGGGCACAGCCCTCAGGAGCCCCAAGCC----CTTGCCTCTCTGCCCCCTGCATTTCCCAACAAGCTTCTGAGCTTTCTCCCAACTCCCTACAAATCCACTCAAAGG---CTC-CTGTCAAATGAGATA-AAGTGGGTTCTTTAAAAAATGGACCCAGCATCTGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75799497 346 + 122082543 ACC--TGCCTGCCTCAGTTTCTCTCTTGGGTGAATGCAGTCAGTTGCTC--TGTCTATTGCCAGAACCAAGTGAGGA------AGGACATAGACTAGAAACCTACCGAGAAGCGAATGTTCTTGCCAATGCT-GAGTACCAGCTGGCGGGAGGTGGTGGGGGTGGGGTGGAGGGGTGGGGATCTCCACGCAGCTGGATATGTCCA-AGTTTAATCAATCATGC----------------TGCTGGGG-------CTCCGCAGCAGAACTTCCCCCCTCCCCCGGCAAGGTTCAGAGAGTGCAGT---------------------------------------------------------------------------------TTTCTCTC----CCCTGCAGACTCTCTCAAAGG---CCCTCTGCCA------ATA-AAACAGACTTCACAAAGGATGGCTGGGCTGTCTGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15627127 387 - 61074082 CCCTGAGCCTGCCTCAGTTTCACTATCAGTGAAGTATATTTGGCCGCCC----TCTTCTGCAAGGACCAGGTGAGGATGCTGGGGGAAGTGCAGT-----------GAGAAGTGAATGTACTTGCCCAGGCTGGGGTGCTGACTGGC-----------------------ATGAATGAGCATCTTTTAGCACCTGGACGTGTCCAGA-CTCCATCAGTCATGTTGCCTTCCATG---------------------TTGGCAGCTGAA------TCGGCCCTTAATGAAGTTGAGTGGG-ACAGTCTGCCCTAGGTCATAGCCCTCAGGAACCCTGTGCTTATACTTGCTTCCTTTCTACCTGCTTCTCTTAACAGGCTTCCGAGC---------ACCACCCCCA---------AAAGG---CCC-CCATCCAATGAAGTAGAAGTGCGTTCCTCGAAGGCtggcccaggtgtctgt i canFam3.chr9 C 0 C 0 e papAnu2.chr16 61294 410 + 74645514 M e nomLeu3.chr19 74447 2942 - 81552678 I a score=2548.000000 s hg38.chr17_GL383563v3_alt 124095 1 + 375691 a s panTro4.chr17 122362 1 + 82630442 a i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20296 1 + 73212453 a i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50437 1 + 80904711 a i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51357 1 + 80997621 a i macFas5.chr16 C 0 C 0 s chlSab2.chr16 52854 1 + 75148670 a i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867694 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15627514 1 - 61074082 a i canFam3.chr9 C 0 C 0 e mm10.chr11 75799843 0 + 122082543 C e papAnu2.chr16 61294 410 + 74645514 M e nomLeu3.chr19 74447 2942 - 81552678 I a score=92693.000000 s hg38.chr17_GL383563v3_alt 124096 54 + 375691 gcactagcatgtctatttactttgtcactgaggctggagtgcagtggtgtgatc s panTro4.chr17 122363 54 + 82630442 gcactagcatgtctatttactttgtcactgaggctggagtgcagtggtgcaatc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20297 54 + 73212453 gcactagcatgcctatttactttgtcactgaggctggagtgcagtggtgcgatc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50438 54 + 80904711 gcaccagcgtgtctatttactttgtcaccgaggctggagtgcagtggtgagatc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51358 54 + 80997621 gcaccagcgtgtctatttactttgtcaccgaggctggagtgcagtggtgagatc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 52855 54 + 75148670 gcactagcgtgtctatttactctgtcaccgaggctggagtgcagtggtgagatc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867695 54 - 1291538 GCGATAGCATGTCTAGTCAGtttgtcaccgaagctggagtgcagtggtgtgatc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75799843 0 + 122082543 C e canFam3.chr9 15627515 0 - 61074082 C e papAnu2.chr16 61294 410 + 74645514 M e nomLeu3.chr19 74447 2942 - 81552678 I a score=204926.000000 s hg38.chr17_GL383563v3_alt 124150 93 + 375691 atggctcactgcaacctcgacctcccgaggctcaagtgatcttcccaactcagcctctcaagtatctgggaccaaatgcatgcaccaccatcc s panTro4.chr17 122417 93 + 82630442 atggctcactgcaacctcgacctcccgaggcgcaagtgatcttcccaactcagcctctcaagtatctgggaccaaatgcatgcaccaccatcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20351 93 + 73212453 atggctcactggaatctcgacctcccgaggctcaagtgatcttcccaactcagcctcccaagtatctgggaccacacgcatgcaccaccatcc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50492 93 + 80904711 atggctccctgcagcctcgacctcctgaggctcaagtgatcttcccaactgagcctcccaagtaactgggtccacgtgcatgcaccaccatcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51412 93 + 80997621 atggctccctgcagcctcgacctcctgaggctcaagtgatcttcccaactgagcctcccaagtaactgggtccacgtgcatgcaccaccatcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61705 93 + 74645514 atggctcactgcagcctcgacctcctgaggctcaagtgatcttcccaactgagcctcccaagtaactgggtccacgtgcatgcaccaccatcc i papAnu2.chr16 M 410 C 0 s chlSab2.chr16 52909 93 + 75148670 acggctcactgcagcctcgacctcccgaggctcaagtgatcttccccactgagcctcccaagtatctggctccacatgtatgcaccaccatcc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867749 92 - 1291538 acagctcgctgcagcctcgacat-ctgaggctaaagttatcttcccaactcagcctcccaagtatctgggaccacaagcatgcaccaccatgc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75799843 0 + 122082543 C e canFam3.chr9 15627515 0 - 61074082 C e nomLeu3.chr19 74447 2942 - 81552678 I a score=17676.000000 s hg38.chr17_GL383563v3_alt 124243 5 + 375691 ccagc s panTro4.chr17 122510 5 + 82630442 ccagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20444 5 + 73212453 ccagc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50585 5 + 80904711 ccagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51505 5 + 80997621 ccagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61798 5 + 74645514 ccagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53002 5 + 75148670 ccagc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867841 5 - 1291538 ccagc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15627515 5 - 61074082 ccagc i canFam3.chr9 C 0 C 0 e mm10.chr11 75799843 0 + 122082543 C e nomLeu3.chr19 74447 2942 - 81552678 I a score=176183.000000 s hg38.chr17_GL383563v3_alt 124248 80 + 375691 taatttttaaaatttttgtagagacggggtcttgccatgttaccctggctagtctcaaactcctggctttaaatgatttt s panTro4.chr17 122515 80 + 82630442 taatttttaaaatttttgtagaggcggggtcttgccatgttaccctggctagtctcaaactcctggctttaaatgatttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20449 80 + 73212453 taatttttaaagtttttgtagagacggggtctcgccatgttacccaggctagtctcaaactcctggctttaaatggtttt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50590 80 + 80904711 taatttttaaaatttttgtagagacggggtctccccatgttacccaggctagtctcaaactcctggctttaaacagtttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51510 80 + 80997621 taatttttaaaatttttgtagagacggggtctccccatgttacccaggctagtctcaaactcctggctttaaacagtttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61803 80 + 74645514 taatttttaaaatttttgtagagacagggtctccccatgttacccaggctagtctccaactcctggctttaaACAGTTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53007 80 + 75148670 taatttttaaaatttttgtagagacagggtctccccatgttgcccaggctagtctcaaactcctggctttaaacagtttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867846 73 - 1291538 tgattttttaaatttttgtagagatggggt-------tgttacccaggctggtctcaaactcctgggttgaaatggtatt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75799843 0 + 122082543 C e canFam3.chr9 15627520 0 - 61074082 C e nomLeu3.chr19 74447 2942 - 81552678 I a score=100952.000000 s hg38.chr17_GL383563v3_alt 124328 45 + 375691 cctgccctggcctctcaaaatgctgagattacaagcgtgagttgc s panTro4.chr17 122595 45 + 82630442 cctgccctggcctctcaaaatgctgagattacaagcgtgagtcgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20529 45 + 73212453 cctgccctggcctctcaaaatgctgagattacaagcatgggtcgc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 50670 45 + 80904711 cctgccctggtctctcaaaatgctgagattacaagcatgagtcac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51590 45 + 80997621 cctgccctggtctctcaaaatgctgagattacaagcatgagtcac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61883 45 + 74645514 CCTGCCCTggtctctcaaaatgctgagattacaagcatgagtcac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53087 45 + 75148670 cctgccctggtctctcaaaatgctgagagtacaagcatgagtcac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867919 45 - 1291538 cctgccctggcttttcaaagtgctgggattacaagcatgagtcac i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75799843 11 + 122082543 CCCACCTTGAC---------------------------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15627520 0 - 61074082 C e nomLeu3.chr19 74447 2942 - 81552678 I a score=29016.000000 s hg38.chr17_GL383563v3_alt 124373 12 + 375691 cacaccca---gccc s panTro4.chr17 122640 12 + 82630442 cacaccca---gccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20574 12 + 73212453 cacaccca---gccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 77389 15 - 81552678 CACACCCACTGACTC i nomLeu3.chr19 I 2942 C 0 s rheMac3.chr16 50715 12 + 80904711 cacgccca---gccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51635 12 + 80997621 cacgccca---gccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61928 12 + 74645514 cacgccca---gccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53132 12 + 75148670 cacgccca---gccc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867964 12 - 1291538 tgccccca---gcAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75799854 0 + 122082543 C e canFam3.chr9 15627520 0 - 61074082 C a score=1239883.000000 s hg38.chr17_GL383563v3_alt 124385 366 + 375691 aggatgtctatcaataatgcagattccaggc-ccccatctcacacccactgactcagaatatgtgtgtgcacactcaggatgcatcttaacaagcgcccct-gatgattctggtgcacagtgaaggt--tgagactcgctgGGTTAGAGGGTGCTAATGGTTTA--ACGGTGA-TTTTCAACCTGCTGGGCTGCCTCTAT-ACTGTTCACATGTGTAACATATGCCCATCAGTGACATCTCTCAATATTTAATGATTCTTCACTGGGGAAGTGAGTGACTAACCCAAGGCAGGTGTTGGAATTTCCAGAGAGGTTTGGCAAAGCCACAGTGGGGAGTCTGATCTCCTCCTG----TTTGGGTATTCTGACCTCTTTCC s panTro4.chr17 122652 366 + 82630442 aggatgtctatcaataatgcagattccaggc-ccccatctcacacccactgactcagaatatgtgtgtgcacactcaggatgcatcttaacaagtgcccct-gatgattctggtgcacagtgaaggt--tgagacttgctgGGTTAGAGGGTGCTAATGGTTTA--ACGGTGA-TTTCCAACCTGCTGGGCTGCCTCTAT-ACTGTTCACATGTGTAACATATGCCCATCAGTGACATCTCTCAATATTTAGTGATTCTTCACTGGGGAAGTGAGTGCCTAACCCAAGGCAGGTGTTGGAATTTCCAGAGAGGTTTGGCAAAGCCACAGTGGGGAGTCTGATCTCCTCCTG----TTTGGGTATTCTGACCTCTTTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20586 366 + 73212453 aggatgtctatcaataatgcagattccaggc-cctcacctcacacccactgactcacaatatgtgtgtgcatattcaggaagcatcttaacaagttcccct-gatgattctggtgcacaatgaaggt--tgagacttgctgGGTTAGAGGGTGCTAATGGTTTA--ACAGTGA-TTTTCAACCTACTGGGCTGCCTCTAT-GCTGTTCACATGTGTAACATATGCCCATCAGTGACATCTCTCAATATTTAGTGATTCTTCACTGGGGAAGCGAGTGCCTAACCCAAGGCAGGTGCTGGAATTTCCAGAGAGGTTTGGCAAAGCCACACTGGGGAGTCTGATCTCCTCCTG----TTTGGGTATTCTGACCTCTTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 77404 362 - 81552678 AGGATATGTGT-----GTGCACACTCAGGACgcaccacctcacacccactgactcaggatacctgtgtgcccactcaggatacatcttaacaagtacccct-gatgattctggtacacaatgaaggt--tgagacttgctgGATTAGAGGGTGCTAATGGTTTA--ACAGTGA-TTTTCAACCTGCTGGGCTGCCTCTAT-GCTGTTCACATGTGTAACATATGCCCATCAGTGACATCTCTCAATATTTAGTGATTCTTCACTGGGGAAGTGAGTGCCTAACCCAAGGCAGGTGTTGGAATTTCCAGAGAGGTTTGGCAGAGCCACAGCAGGGAGTCTGATCTCCTCCTG----TTTGGGTAGTCTGACCTCTTTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 50727 364 + 80904711 aggatgtctatcaataatgcagattccaggc-ccctacctcacacccactgactcagaatatgtgtgtgcacactgagcatgcatctt---aagtacccct-gatgattctggtgcacaatggaggt--tgaTACTTGCTGGGTTAGAGGGTGCTAATGGTTTA--ACAGTGATTTTTCAACCTGCTGGGCTGCCTCTAT-GCTGTTCACATGTGTAACATATGCCCATCAGTGACATTTCTCAATATTTAGTGATTCTTCACTGGGGAAGTGAGTGCCTAACCCAAGGCAGGTGTTGGAATTTCCAGAAAGGTTTGGCAAAGCCACACTGGGGGGTCTGATATCCTCCTG----TTTGGATGTTCTGACCTCTTTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 51647 364 + 80997621 aggatgtctatcaataatgcagattccaggc-ccctacctcacacccactgactcagaatatgtgtgtgcacactgagcatgcatctt---aagtacccct-gatgattctggtgcacaatggaggt--tgaTACTTGCTGGGTTAGAGGGTGCTAATGGTTTA--ACAGTGATTTTTCAATCTGCTGGGCTGCCTCTAT-GCTGTTCACATGTGTAACATATGCCCATCAGTGACATTTCTCAATATTTAGTGATTCTTCACTGGGGAAGTGAGTGCCTAACCCAAGGCAGGTGTTGGAATTTCCAGAAAGGTTTGGCAAAGCCACACTGGGGGGTCTGATATCCTCCTG----TTTGGATGTTCTGACCTCTTTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 61940 360 + 74645514 aggaTGTCTATCAATAATGCAGATTCCAGGC-CCCTACCTCACACCCACTGATTCagaatatgtgtgtgcacactcaGGATGCATCTT---AAGTACCCCT-GATGATTCTGGTGCACAATGGAGGT--TGAGACTTGCTGGGTTAGAGGGTGCTAATGGTTTA--ATAGTGATTTTTCAACCTGCTGGGCTGCCTCTAT-GCTGTTCACATGTGTAACATATGCCCATCAGTGACATTTCTCAGTATTTAGTGATTCTTCACTGG----GTGAGTGCCTAACCCAAGGCAGGTGTTGGAATTTCCAGAAAGATTTGGCAAAGCCACACTGGGGGGTCTGATATCCTCCTG----TTTGGATATTCTGACCTCTTTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53144 356 + 75148670 aggatgtctatcaataatgcagattccaggc-ccctacctcacacccactgac--------tgtgtgtgcacactcagcatgcatctt---aagtacccct-gatgattctggtgcacaatggaggt--tgagaCTGGCTGGGTTAGAGGGTGCTAATGGTTTA--ACAGTGATTTTTCAACCTGCTGGGCTGCCTCTAT-GCTGTTCACATGTGTAACATATGCCCATCAGTGACATTTCTCAATATTTAGTGATTCTTCACTGGGGAAGTGAGTGCCTAACCCAAGGCAGGTGTTGGAATTTCCAGAAAGGTTTGGCAAAGTCACACTGGGGAGTCTGATATCCTCCTG----TTTGGATATTCTGACCTCTTTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 867976 359 - 1291538 AGGATGTCtatcaacaatgccgactacaggc-ccc-acctcacacccact----cagaa--tgtgtatgcacagtgaggatgcatcttaaccagcacccc--gatgattctggtgcacaatgaaggt--tgagaCTGGCTGGGTGAGAGGGTGCTAATGGTTTACCACAGTGA-TTGTCAACCTGCTGGGCTGCCTCTGT-GCTGTTTACATGTGTAACACAAGCCCATCA-TGACATCCCTCAGTATTTAGTGATTCTTCACTGGGGAAGTGAGTGTCTAACCCGAAGTGGGTGCTGGGATTTCCAGAGGGGTTTGGCAAAGCCACTCTGGGGAGTCTGATCTCCTCCTG----TTTGGATATTCTGACCTCTTTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75799854 346 + 122082543 -GAATGGttatgaataatgcagattccgggg-ccccacctcacacccactgacccagaataggcgagtgcactttc-ggatgtgtctaaacaaacacctctagattatttttacgcacagccaaggc--tgggaattgctgGGTTAAAAGGTGCTAATGGCTTGATACCATGA-TGCCCAAGCTGCAGGTGGCCCCCCATCACGGTTCACACCTGTCACACACA-CCACTGACAGCACCTCTCAGTGTTTAGCAACTCTGACCTGAGGAAATAGGTGCCTAA--CAGGAATTGTGGGGGCATTTCTAGAAAGATTTGGCAAAGTCAGAGTTGGGAGTCTGA-----------------------TTTGGCCTTCTTTT i mm10.chr11 C 0 C 0 s canFam3.chr9 15627520 301 - 61074082 aggatgcttattaatgatgcagattccaggt-ccctacctcacacccactgagtcag-aTATGTGCGCGAAGACTCAGGATGCATCTTAACCAGCACCCCTGGATTATCTTTATGCACAATTATTTTTATAAGAATTGCTGGGTTAGAGGGTGCCAA-GGTTTA--ATAA----TTCTCAACTCATCTTGCTGCCTCCAC-ACTGTTCA-ATGAACAATGTACG-----------------------------------ACACCCAGGGAGGGGGTG--------------GGTGTTGGAATTTCTAGAGTGCTTTGGCAAA-----------------GATCCCCACATGTCGCTTTGGGCATTGAGACTTCTTTCC i canFam3.chr9 C 0 C 0 a score=15204.000000 s hg38.chr17_GL383563v3_alt 124751 5 + 375691 CGGTG s panTro4.chr17 123018 5 + 82630442 CGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20952 5 + 73212453 CGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 77766 5 - 81552678 TGGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 51091 5 + 80904711 TGGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 52011 5 + 80997621 TGGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 62300 5 + 74645514 TGGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53500 5 + 75148670 TGGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 868335 5 - 1291538 TGTTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75800200 5 + 122082543 TGGTC i mm10.chr11 C 0 C 0 e canFam3.chr9 15627821 0 - 61074082 C a score=5940.000000 s hg38.chr17_GL383563v3_alt 124756 4 + 375691 GAGA s panTro4.chr17 123023 4 + 82630442 GAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20957 4 + 73212453 GGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 77771 4 - 81552678 GAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 51096 4 + 80904711 GAGA i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 53505 4 + 75148670 GAGA i chlSab2.chr16 C 0 C 0 s mm10.chr11 75800205 4 + 122082543 CAGA i mm10.chr11 C 0 I 378 e canFam3.chr9 15627821 0 - 61074082 C e calJac3.chrUn_GL286409 868340 0 - 1291538 C e papAnu2.chr16 62305 0 + 74645514 C e macFas5.chr16 52016 0 + 80997621 C a score=2865.000000 s hg38.chr17_GL383563v3_alt 124760 2 + 375691 AG s panTro4.chr17 123027 2 + 82630442 AG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20961 2 + 73212453 AG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 77775 2 - 81552678 AG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 51100 2 + 80904711 AG i rheMac3.chr16 C 0 I 21 s chlSab2.chr16 53509 2 + 75148670 AG i chlSab2.chr16 C 0 I 21 e mm10.chr11 75800209 378 + 122082543 I e canFam3.chr9 15627821 0 - 61074082 C e calJac3.chrUn_GL286409 868340 0 - 1291538 C e papAnu2.chr16 62305 0 + 74645514 C e macFas5.chr16 52016 0 + 80997621 C a score=257556.000000 s hg38.chr17_GL383563v3_alt 124762 508 + 375691 tgttgggagcaggccccccaaaatctagccataaactggccccaaaactggccataaacaaaacctctgcagcactgtgacatgttcataatggccctaacggctccgctggaaggttgtgggtttaccggaatgagggcaaggaacacccggcccgcccaggacggaaaaccccttaaaggcgttcttaagccacaaacaataccgtgagtgatctgtgccttaagaacatgctcctgctgcagttaaccagcccaacctattcctttaattcagcccgtcccttcgtttcccataagggatacttttagttgatttaacatctatagaaacaatgccaatgactggcttgctgttagtaaatacgtgggtaaatctctgttccgggctctcagctctgaaggctgtgagacccctgatttcccactccacacctctatatttctgtgtgtgtgtctttaattcctctagcgccgctgggttagggtctccccgaccaagctggtct s panTro4.chr17 123029 508 + 82630442 tgttgggagcaggccccccaaaatctagccataaactggccccaaaactggccataaacaaaacctctgcagcactgtgacatgttcataatggccctaacgcctccgctggaaggttgtgggtttactggaatgagggcaaggaacacccggcccgcccaggacggaaaaccccttaaaggcgttcttaagccacaaacaataccgtgagtgatctgtgccttaagaacatgctcctgctgcagttaaccagcccaacctgttcctttaattcagcccatccctttgtttcccataagggatacttttagttaatttaatgtctatagaaacaatgccaatgactggtttgctgttaataaatatgtgcgtaaatctttgtttggggctctcagctctgaaggctatgagacccctgatttcccacttcacacttctatatttctgtgtgtgtgtctttaattcctctagcgctgctgggttagggtctccccgaccaagctggtct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 20963 508 + 73212453 tgttaggagtaggccccccaaaatctagccataaactggccccaaaactggccataaacaaaacctctgcagcactgtgacatgttcataatggccttaacgcccacaatggaaggttgtgggttcaccagaatgagggtaaggaacacctggcccacccaggaaagaaaaccccttaaaggcgttcttaagccacaaacaatagcgtgagcgatctgtgccttaaggacacgctcctgctgctgttaactagcccaacctattccttcaattcagcccatcccttcgtttctcataagggatacttttagttaatttaatatctatggaaacaatgctaatgactggtttgctgttaataaatatgtgggtaaatctttgtttggggctctcagctctgaagcctgtgagacccctgatttcccacttcacacctctatatttctgtgtgtgtgtctttaattcctctagtgctgctgggttagggtctccccgaccaagctggtct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 77777 497 - 81552678 tgttaggagcaggccccccaaaatctatccataaactggccccaaaactggccataaacaaaatctctgcagcactgtaacatgttcataatggccataacgcccacgctggaaggtcgtgggtttaccggaatgagggcgaggaacacccggcccgcccagagtggaaaaccacttaaaggcgttcttaagccacaaacaatagcgtgagcgatctgtgccttaaggacatgctcctgctgcagttaactagcccaacctactcctttaattcagcccatcgcttcgtttcccataagggat-----------atttaatatctatagaaacagtgctaatgactggtttgctgttaataaatacgtgggtaaatctttgtttggggctctcagctctgaaggctgtgagacccctgatttcccacttcacacctctatatttctgtgtgtgtgtctttaattcctctagcactgctgggttagggtctccctgaccgagctggtct i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75800209 378 + 122082543 I e canFam3.chr9 15627821 0 - 61074082 C e calJac3.chrUn_GL286409 868340 0 - 1291538 C e chlSab2.chr16 53511 21 + 75148670 I e papAnu2.chr16 62305 0 + 74645514 C e rheMac3.chr16 51102 21 + 80904711 I e macFas5.chr16 52016 0 + 80997621 C a score=3530.000000 s hg38.chr17_GL383563v3_alt 125270 5 + 375691 cggca s panTro4.chr17 123537 5 + 82630442 cggca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 21471 5 + 73212453 cggca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 78274 5 - 81552678 cggca i nomLeu3.chr19 C 0 C 0 s canFam3.chr9 15627821 5 - 61074082 TGGCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75800209 378 + 122082543 I e calJac3.chrUn_GL286409 868340 0 - 1291538 C e chlSab2.chr16 53511 21 + 75148670 I e papAnu2.chr16 62305 0 + 74645514 C e rheMac3.chr16 51102 21 + 80904711 I e macFas5.chr16 52016 0 + 80997621 C a score=43848.000000 s hg38.chr17_GL383563v3_alt 125275 29 + 375691 GAGAAGGACCAGTTAATGGCTCTTCTTAG s panTro4.chr17 123542 29 + 82630442 GAGAAGGACCAGTTAATGGCTCTTCTTAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 21476 29 + 73212453 GAGAAGGACCAGTTAACGGCTCTTCTTAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 78279 29 - 81552678 GAGAAGGACCAGTTAACGGCTCTTCTTAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 52016 27 + 80997621 GAGAAGGACCAGCTAACAGATCTTCAC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 62305 27 + 74645514 GAGAAGGACCAGCTAACAGATCTTTAC-- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 868340 29 - 1291538 GGGAAGGACCATTTAATAGCTCTTCCTAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15627826 29 - 61074082 GAGAATGAACAGTTAAAGCCTTTCCTTTC i canFam3.chr9 C 0 C 0 e mm10.chr11 75800209 378 + 122082543 I e chlSab2.chr16 53511 21 + 75148670 I e rheMac3.chr16 51102 21 + 80904711 I a score=39359.000000 s hg38.chr17_GL383563v3_alt 125304 11 + 375691 AGTAGGTAACG s panTro4.chr17 123571 11 + 82630442 AGTAGGTAACG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 21505 11 + 73212453 AGTAGGTAACG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 78308 11 - 81552678 AGTAGGTAACG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 51123 11 + 80904711 AGTAGGTAACG i rheMac3.chr16 I 21 C 0 s macFas5.chr16 52043 11 + 80997621 AGTAGGTAACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 62332 11 + 74645514 AGTAGGTAACG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53532 11 + 75148670 AGTAGGTAACA i chlSab2.chr16 I 21 C 0 s calJac3.chrUn_GL286409 868369 10 - 1291538 AGTAGGTAAC- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15627855 11 - 61074082 AGTAGGTGACA i canFam3.chr9 C 0 C 0 e mm10.chr11 75800209 378 + 122082543 I a score=3961449.000000 s hg38.chr17_GL383563v3_alt 125315 1150 + 375691 TGTGTTGTTGAGGAAATGCCCTCTGTGCAGCACTTGGCTGGATGTTCCTTGGTTGGCAT-CT-TGGCTGGTGTCCATGTGCCCGGAGAA-GAAGG------GCCCTCTCTGACCCAGGCCTAATATGTGTCCCCCGTTTCCA------------------CCCTTCCCTGATAACCGGAGGAGATCTTGTCCTGCTGTGCTAATAGAACGTTCTCTGTATTAACAGAAAATTTTAACCCAACAGAGGTGCTTGGATGGAGGAAATCCAAACAATGTTGCTGGTTGATGGAGAGGGGCATTCCAAGGTCTCTTGTCCATTCATTTATTCATGAAGCCACATttcaacaaatatttattgtgcacctgccctgtaacaggccccgagctgtgatctgtagggggctcagtgataaatgaagcCCA-TTTTTCTTTAGATTCCAGATGATGGAGGGGAAGTCAGGAA----GGGAGGTAGGAACC-ACCACTCT-AGGGGTCCCTTGCCTCCTT----CTTGGCATACGCTATGGCCTCGGCATGGAGAGCATGATGGAGCACTGATGCCAGCAAGTCAGC-TC-AACATTTGCAATATAGCGTGTGGCTGCTTAGAGGCCAACTTGATATATTAAGTGATATTAAAAATGCAGCCTATTTCTGATAAT---TTATGCGCA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACGAGCACCAGGCCTACCAGTGGGGAAAAGTTAACACCTACCTAATGATGTTGTTTTGCAGATGTCAGATGCTC-TGGTGCTGCAGTGATGGGCTCAATGGTGCAAAGAAATG-TGAGTC-TTTCTTCTATCCTGGGACACC----------------------------------------------------------------AGAAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--CT----------------------------------------CGGCAGA-----------------------------AGAACCAGG---CTCTCTCCCTCCACACTGCCAAGG----------------TCTGTGCTGTGGGATTGGAAAGAGG-CCGGGTGAGA--------GGCTCCCCTGCCAGGAGAGACTTAGCCCAGGATCAGGTTGCCTAAGGCAAGAGATTAGATGTCACA-GAGGGATAATGCTGAATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGCCTGAGGCTTACAT---CACAGCACAGATCAG---------------CC-TCCCTCCCA------------CAGGCCTGGGGACCACTAGAGCCCAGG---------------GTCTTCATGACTGAAGTGAACATCTCAGCATTATACATGAATTAGAATG s panTro4.chr17 123582 1153 + 82630442 TGTGTTTTTGAGGAAATGCCCTCTGTGCAGCACTTGGCTGGATGTTCCTTGGTTGGCAT-CT-TGGCTGGTGTCCATGTGCCCGGAGAA-GAAGG------GCCCTCTCTGACCCAGGCCTAACATGTGTCCCCCGTTTCCA------------------CACTTCCCTGATAACCGGAGGAGATCTTGTCCTGCTGTACTAATAGAACGTTCTCTGTATTAACAGAAAATTTTAACCCAACAGAGGCGCTTGGATGGAGGAAATCCAAACGATGTTGCTGGTTGATGGAGAGGGGCATTCCAAGGTCTCTTGTCCATTCATTTATTCATGAAGCCACATttcaacaaatatttattgtgcacctgccctgtaacaggccccgagctgtgatctgtagggggcccagtgataaatgaagcCCA-TTTTTCTTTAGATTCCAGATGATGGAGGGGAAGTCAGGAA----GGGAGGTAGGAACC-ACCACTCT-AGGGGTCCCCTGCCTCCTT----CTTGGCATATGCTATGGCCTCGGCATGGAGAGCATGATGGAGCACTGATGCCAGCAAGTCAGC-TC-AACATTTGCAATATAGCGTGTGGCTGCTTAGAGGCCAACTTGATATATTAAGTGATATTAAAAATGCAGCCTATTTCTGATAATTTATTATGCGCA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACGAGCACCAGGCCTACCAGTGGGGAAAAGTTAACACCTACCTAATGATGTTGTTTTGCAGATGTCAGATGCTC-TGGTGCTGCAGTGATGGGCTCAATGGTGCAAAGAAATG-TGAGTC-TTTCTTCTATCCTGGGACACC----------------------------------------------------------------AGAAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--CT----------------------------------------GGGCGGA-----------------------------AGAACCAGG---CTCTCTCCCTCCACACTGCCAAGG----------------TCTGTGCTGTGGGATTGGAAAGAGG-CCGGGTGAGA--------GGCTCCCCTGCCAGGAGAGACTTAGCCCAGGATCAGGTTGCCTAAGGCAAGAGATTAGATGTCACA-GAGGGATAATGCTGAATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGCCTGAGGCTTATAT---CACAGCACAGACCAG---------------CC-TCCCTCCCA------------CAGGCCTGGGGACCACTAGAGCCCAGG---------------GTCTTCATGACTGAAGTGAACATCTCAGCATTATACATGAATTAGAATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 21516 1151 + 73212453 TGTGTTTTTGAGGAAATGCCCTCTGTGCAGCACTTGGCTGGATGTTCCTTGGTTGGCAT-CT-TGGCTGGTGTCCATGTGCCCGGAGAA-GAAGG------GCCCTCTCTGACCCAGGCCTAACATGTGTCCCCCGTTTCCA------------------C-CTTCCCTGATTACCGGAGGAGATCTTGTCCTGCTGTGCTAATAGAACGTTCTCTGTATTAACAGAAAATTTTAACCCAACAGAGGCGCTTGGATGGAGGAAATCCAAACAATGTTGCTGGTTGATGGAGAGGGGCCTTCCAAGGTCTCTTGTCCATTCATTTATTCATGAAGCCAcattccaacaaatatttattgtgcacctgccctgtaacaggccccgtgctgcggtctgtagggggcccagtgataaacgaagcCCA-TTTTTCTTTAGATTCCAGATGATGGAGGGGAAGTCAGGAC----GGGAGGTAGGAACC-ACCACTCT--GGGGTCCCCTGCCTCCGT----CTTGGCATACACTATGGCCTCAGCATGGAGAGCATGAGGGAGCGCTGACACCAGCAAGTCAGT-TC-AGCATTTGCAATATAGCTTGTGGCTGCTTAGAGGCCAACTTGATATATTAAGCGATATTAAAAATGCAGCCTATTTCTGATAATTTATTATGCACA-----TTTTCATAAACACATTACACTCGTCACAGTCCATTTACGAGCACCAGGCCTACCAGTGGGGAAAAGTTAACACCTACCTAATGATGTTGTTTTGCAGATGTCAAATGCTC-TGGTGCTGCAGTGATGGGCTCAGCGGTGCAAAGAAATG-TGAGTC-TTTTTTCTATCCTGGGACACC----------------------------------------------------------------AGAAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--CT----------------------------------------GGGCGGA-----------------------------AGAAGCAGG---CTCTCTCCCTCCACACTGCCAAGG----------------TCTGTGCTGTGGGATTTGAAAGAGG-CTGGGTGAGA--------GCTTCCCCTGCCAGGAGAGACTTAGCCCAGGATCAGGCTGCCTAAGGCAGGAGATTAGATGTCACA-GAGGGATAATGCTGAATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGGCTGAGGCTTATAT---CACAGCACAGACGAG---------------CC-TCCCTCCCA------------CAGGCCTAGGGACCACTAAAGCCCAGG---------------GTCTTCATGATTGGAGTGCACTTCTCAGCATTATACGTGAATTAGAATG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 78319 1149 - 81552678 TGTGTTTCTGAGGCAATGCCCTCTGTGCAGCTCTTGGCTGGATGTTCCTTGCTTGGCAT-CT-TGGCTGGTGTCCATGTGCCTGGAGAA-GAAGG------GCTCTCTCTGACCCAGGCCTAACATGTGTCCCCCGTTTCCA------------------CCCTTCCCTGATTACCGGAGGAGATCGTGTCCTGCTGTGCTAATAGAACGTTCTCTGTATTAACAGAAAATTTTAACCCAACAGAGGCGCTTGGATGGAGGAAATCCA----GTGTTGCTGGTTGACGGAGAGGGGCCTTCCAAGGTCTCTTGTCCAGTCATTTATTCATGAAGCCACATttccacaaatatttattgtgcacctgccctgtaacaggccccgtgctgcgatctgtagggggcccagtgataaatgaagcCCA-TTTTTCTTTAGATTCCAGATGATGGAGGGGAAGTCAGGAA----GGGAGGCAGGAACC-ACCACTCTGGGGGGTCCCCTGCCTCCTT----CTTGGCATACAGTATGGCCTCGGCATGGAGAGCACGATGGAGCACTGACGCCAGCAAGTCAGT-TC-AGCAATTGCAATACAGCTTGTGGCTGCTTAGAGGCCAACTTAATATATTAAGCGATATTAAAAATGCAGCCTATTTCTGGTAATTTATTATGCACA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACGAGCACCAGGCCTACCAGTGGGGAAAAGTTAACACCTACCTAATGATGTTGTTTTGCAGATGTCAAATGCTG-TGGTGCTGCAGTGACGGGCTCAATGGTGCAAAGAAATG-TGAGTC-TTTTTTCTATCCTGGGAGACC----------------------------------------------------------------AGAAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--CT----------------------------------------GGGCGGA-----------------------------A-AACCAGG---CTCTCTCCCTCCACACTGCCAAGG----------------TCTGTGCTGTGGGATTTGAAAGAGG-CCGGGTGAGA--------GGCTCCCCTGCCAGGAGAGACTTAGCCCAGGATCAGGCTGCCTAAGGCAGGGGATTAGATGTCACA-GAGGGATAATGCTGAATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGCCTGAGGCCTATAT---CACAGCACAGACGAG---------------CC-TCCCTCCCA------------CAGGCCTGGAGACCTCTAGAGCCCAGG---------------GTCTTCATGACTGGAGTGAACATCTCAGCATTATACATGAATTAGAACG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 51134 1157 + 80904711 TGTGTTTTTCAGGAAATGCCCTCTCGGCAGCACTTGACTGGATGTTCCTTGGTTGGCAT-CT-CGGCTGGTGCTCATGTGCCCGGAGGA-GAAGG------GCCCTCTCTGACCCAGGCCTAACATGTGTCCCCCGTTTCCA------------------CCCTTCCCTGATTGCCGGAGGAGCTCTTGTCCTGCTGTGCTAATAGAACGTTCTTTGTATTAACAGAAAATGTTAACCCAACAGAGGCGCTTGGATGGAGGAGTTCCAAACAATGTTGCTGGTTGATGGAGAGGGGCCTTCCAAGGTCTCTTCTCCattcatttattcatgaagcc--------acaaatatttattgtgcacctaccctgtcacaggccccaggctgcgttctgtagggagcccagggataaatgaagcCCC-TTTTTCTTTGGATTCCAGATGACGGAGGGGAGGTCAGGAA----GGGAGGTAGCAACC-ACCACTCT-GGGGGTCTCCTGCCTCCTT----CTTGGCGTACACTATGGCCTCGGCATGGAGAGCATGGTGGAGCGCTGACGCCAGCAAGTCAGT-TC-AGCATTTGCAATATAGCTTGTGGCTGCTGAGAGGCCAACTTGATATATTAAATGATATTAAAAATGCAGCCTATTTCTGATAATTTATTATGCACA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACGAGCACCAGGCCTACCAGTGGGGAAAAGTTAACACCTACCTAATGA---TGTTTTGCAGATGTCTGATGCTC-TGGTGCTGCGGTGATGGGGTCAATGGTGCAAAGAAATG-CGAGTG-TTTTTTCTATCCTGGGGCACC----------------------------------------------------------------AGGAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--AT----------------------------------------GGCTGGA-----------------------------AGAACCAGG---CTCTCTCCCTCCACACTGCCAAGG----------------TCTGCGCTGTGGGATTTGAAAGAGG-CCGGGTGAGA--------GGCTCCCCGGCCAGGAGAGACTTAGCCCAGGATCAGGCTGCCTAAGGCAGGAGATTAGGTGTCACA-GAGGGATAATGCTGGATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGCCTGAGGCTCATGT---GACAGCACAGACGAG---------------CT-TCCCTCCCA------------CAGGCCTGGGGACCACTAGAGCCCAGGGTCTTGGCTGGAGCAGTCTTCATGACTGGGGTGAACATCTCAGCATTATACATGAACTACAATG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 52054 1144 + 80997621 TGTGTTTTTCAGGAAATGCCCTCTCGGCAGCACTTGACTGGATGTTCCTTGGTTGGCAT-CT-TGGCTGGTGCTCATGTGCCCGGAGGA-GAAGG------GCCCTCTCTGACCCAGGCCTAACATGTGTCCCCCGTTTCCA------------------CCCTTCCCTGATTGCCGGAGGAGCTCTTGTCCTGCTGTGCTAATAGAACGTTCTTTGTATTAACAGAAAATGTTAACCCAACAGAGGCGCTTGGATGGAGGAGTTCCAAACAATGTTGCTGGTTGATGGAGAGGGGCCTTCCAAGGTCTCTTGTCCattcatttattcatgaagcc--------acaaatatttattgtgcacctaccctgtcacaggccccaggctgcgttctgtagggagcccagggataaatgaagcCCC-TTTTACTTTGGATTCCAGATGACGGAGGGGAGGTCAGGAA----GGGAGGTAGGAACC-ACCACTCT-GGGGGTCTCCTGCCTCCTT----CTTGGCGTACACTATGGCCTCGGCATGGAGAGCATGGTGGAGCGCTGACGCCAGCAAGTCAGT-TC-AGCATTTGCAATATAGCTTGTGGCTGCTGAGAGGCCAACTTGATATATTAAATGATATTAAAAATGCAGCCTATTTCTGATAATTTATTATGCACA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACGAGCACCAGGCCTACCAGTGGGGAAAAGTTAACACCTACCTAATGA---TGTTTTGCAGATGTCAGATGCTC-TGGTGCTGCGGTGATGGGGTCAATGGTGCAAAGAAATG-CGAGTG-TTTTTTCTATCCTGGGGCACC----------------------------------------------------------------AGGAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--AT----------------------------------------GGCTGGG---------------------------------------------CTCTCTCCACACTGCCAAGG----------------TCTGCGCTGTGGGATTTGAAAGAGG-CCGGGTGAGA--------GGCTCCCCGGCCAGGAGAGACTTAGCCCAGGATCAGGCTGCCTAAGGCAGGAGATTAGGTGTCACA-GAGGGATAATGCTGGATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGCCTGAGGCTCATGT---GACAGCACAGACGAG---------------CT-TCCCTCCCA------------CAGGCCTGGGGACCACTAGAGCCCAGGGTCTTGGCTGGAGCAGTCTTCATGACTGGGGTGAACATCTCAGCATTATACATGAACTACAATG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 62343 1152 + 74645514 TGTGTTTTTGAGGAAATGCCCTCTGCGCAGCACTTGACTGGATGTTCCTTGGTTGGCAT-CT-TGGCTGGTGCTCATGTGCCCGGAGAA-GAAGG------GCCCTCTCTGACCCAGGCCTAACATGTGTCCCCCGTTTCCA------------------CCCTTCCCTGATTACCGGAGGAGCTCTTGTCCTGCTGTGCTAATAGAACGTTCTTTGTATTAGCAGAAAATGTTAACCCAACAGAGGCGCTTGGATGGAGGAGTTCCAAACAATGTTGCTGGTTGATGGAGAGGGGCCTGCCAAGGTCTCttgtccattcatttattcatgaagcc--------acaaatatttattgtgca-----cctgTCACAGGCCCCAGGCTGCGTTCTGTAGGGGGCCCAGGGATAAATGAAGccccttttttctttagattccaGATGACGGAGGGGAGGTCAGGAA----GGGAGGTAGGAACC-ACCACTCT-GGGGGTCTCCTGCCTCCTT----CTTGGCGTACACTATGGCCTCGGCATGGAGAGCACGGTGGAGCGCTGACGCCAGCAAGTCAGT-TC-AGCGTTTGCAATATAGCTTGTGGCTGCTGAGAGGCCAACTTGatatattaaatgatattaaaaatgcAGCCTATTTCTGATCATTTATTATGCACA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACGAGCACCAGGCCTACCAATGGGGAAAAGTTAACACCTAGCTAATGA---TGTTTGGCGGATGTCAGATGCTC-TGGTGCCGCGGTGATGGGGTCAATGGTGCAAAGAAATG-CGAGTG-TGTTTTCTATCCTGGGGCACC----------------------------------------------------------------AGGAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--CT----------------------------------------GGCTGGA-----------------------------AGAACCAGG---CTCTCTCCCTCCACACTGCCAAGG----------------TCTGCGCTGTGGGATTTGAAAGAGG-CCGGGTGAGA--------GGCTCCCCGGCCAGGAGAGACTTAGCCCAGGATCAGGCTGCCTAAGGCAGGAGATTAGATGTCACA-GAGGGATAAT-CTGAATCCTCTGGGAAAGTTCTAGAAATGACCTCtgggagaaagagaggcagagccTGAGGCTTATGT---GACAGCACAGACGAG---------------CT-TCCCTCCCA------------CAGGCCTGGGGACCACTAGAGCCCGGGGTCTTGGCTGGAGCAGTCTTCACGACTGGGGTGAACATCTCAGCATTATACATGAACTAGAATG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 53543 1157 + 75148670 TGTGTTTTTGAGGAAATGCCCTCTGTGCAGCACTTGACTGGATGTTCCTTGGTTGGCAT-CT-TGGCTGGTGTTCATGTGCCCGGAGAA-GAAGG------GCCCTCTCTGACCCAGGCCTAACATGTGTCCCCCGTTTGCA------------------CCCTTCCCTGATTACCGGAGGAGCTCTCGTCCTGCTGTGCTAATAGAACGTTCTTTGTATTAACAGAAAATGTTAACCCGACAGAGGCGCTTGGATGGAGGAGTTCGAAACAGTGTTGCTGGCTGATGGAGAGGGGCCTGCCGAGGTCTCTTGTCCattcatttattcatgaagcc--------acaaatatttattgtgcacctaccctgtcacaggccccaggctgcgttctgtagggggcccagggataaatgaagcCCCTTTTCTCTTTAGATTCCAGATGACGGAGGGGACGTCAGGAA----GGGAGGTAGGAACC-ACCACTCT-GGGGGTCTCCTGCCTCCTT----CTTGGCATACACTATGGCCTCGGCATGGAGAGCATGGTGGAGCGCTGACGCCAGCAAGTCAGT-TC-AGCATTTGCAATATAGCTTGTGGCTGCTGAGAGGCCAACTTGATATATTAAATGATATTAAAAATGCAGCCTATTTCTGATAATTTATTATGCACA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACGAGCACCAGGCCTACCAAT-GGGAAAAGTTAACACCTACCTAATGA---TGTTTTGCAGATGTCAGATGCTC-TGGTGCTGCGGTGATGGGGTCAATGGTGCAAAGAAATG-TGAGTC-TTTTTTCTATCCTGGGACACC----------------------------------------------------------------AGGAGGCTG--------------------------------------------------------------------------------------------------CCCAGGG--CT----------------------------------------GGCTGGA-----------------------------AGAACCAGG---CTCTCTCCCTCCACACTGCCAAGG----------------TCTGCGCTGTGGGATTTGAAAGAGG-CCGGGTGAGA--------GGCTCCCCGGCCAGGAGAGACTTAGCCCAGGATCAGGCTGCCTAAGGCAGGAGATTAGATGTCACA-GAGGGATAATGCTGAATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGCCTGAGGCTTATGT---GACAGCACAGACGAG---------------CT-TCCATCCCA------------CAGGCCTGGGGACCACTAGAGCCCAGGGTCTTGGTTGGAGCAGTCTTCATGACTGGGGTGAACATCTCAGCATTATACATGAACTAGAATG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 868379 1141 - 1291538 -GTGTTTTTGAGGAAATACCCTTAGTGCAGCACTTGGCTGGATGCTCCTTGGTTGGCAT-CT-TGGCTGGTGTCCACATACCCAGAGAG-GAAGG------GCCCTCTCTGACCCTGGCCTAACATGTATCCCCTGTTTAC---------------------CTTCCCTGATTACCACAGGGGCTCCTATCCTGCTGTGCTAATAGTACATTCTCTGTATTAACAGAAAACTTTAACCCAACAGAGGGGCTTGAATGGAGGAATTCCAAACAATGTTGCTGTTTGATGGAAAGGGGCCTTCCAAGGTCTCCTGTCTGTTCATTTATTCCTGAAGCCACATttcaacaaatatatattgggcacctaccctacaacaggcccc-tgctgcattctgaggggg--ctggtaataaataaagccca-tttttctttagattccacatgacggaggggaagtcagaAA----GGGATGTAGGAACC-ACCACTCT--GGGGTCCCATGTCTCCTT----CTTGATGTGTGCCATAGCCTTGGCATGGAG-GCATGCTGGAGTGCTGATGCCAGCAAGTCAGC-TC-AGCATTTGCAACACAGCTTGTGGCTG-TGAGAGGCCAACTTGATACATTAAGTGATGTTAAAAATGCAGCCTATTTCTGATAATTTATTATGCACA-----TTCTCATAAACACATTACACTCGTCACAGTACATTTACAAGCACCAGGCCTCCCAGTGGGGAAAAGTTAACACCTACCTAATGATGTTGTTTTGCAGATGTCAAAGGCGC-TGGTGCTGCAGTGATGGGCTCAATGGAGCAAAGAAATA-CGAGTCTTTTTTTCTATCCAGGGACACC----------------------------------------------------------------AGGAGGCTG---------------------------------------------------------------------------------------------------CCAGGG--CT----------------------------------------GGGCGGA-----------------------------AGAACAAGG---CTCTCTCCCTCCACCCTGCCAAGG----------------CCTGGGCTGTGGGATTGGAGAGAGG-CCGGGTGAGA--------GGCTCCCCTGCCAGGAGAGACTTAGCCCAGGATCAGGCTGCCTTTGGCAGGAGATTAGATGT--CA-GAGGGATAATGCTGAATCCTCTGGGGAAGCTCTAGAAATGACCTCTGGGAGAAAGAGGGGCAGAGCCTGAGGCTTATGT---GACAACACAGACGTG---------------CC-TTCCTCCCA------------CAGGCCTGGGGACCCCTAGAGCCTAGG---------------ATCTTCATGACTGGGGTGAACATCTCAGCGTTATACGTGAATTAGAATG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75800587 1349 + 122082543 TGCATGATTGAGAAAACCGCCTCTACTCAGCAGTTGGCTGGACA-TCTTTGATTGGTGTCCC-TAGCTAGTATTTGTGTACATGGGGGAGGGAAG------GCTGTGGCTGGTTCCTGCCCAC------TCCCCCACTCCCCACACTCACAGCTTGCTCTTCTTTCTCTGATTACTGAAGGAGCTCTTGCAAGGCTGGACTGAGAGAACTTTCTTTGTATTAATGGGGAATTTTAACCCAAAAGAGAGTCC--GGCAGAGCAACTCCAAACACCGTTGCTGGTTGGTGGAGAGGCACCGTCCAGGGGTTCTTGTCCGTTCATTTATTCATGACTCCACACTTCAACAAATGTTTACCCAGTATGTCCTCTGCAATA-GCTCTGCACTGCAGTCTGCAGGGGGCTGCCATAGAAATGAAGCCCCGCATCTCTTTAGATTCTGGACTGTGGAGGGTAAATCAGGAGGGATGGGAGTCAGGCAC---TCACTCT-GGGGACACCTCTCTTCCTTATACCTTCACCTACAC--TGACCT-------------------GAGTGCCGACCCAAGCCAGTCAGCGTC-AGTGTTTGCCATATAGATGGTGTCTGCTGCAGGGCGAAC--AATGTGCTAAGCAATATTAAA----------ATGCCGGCTAATTTATCGTGTATATTCTCTTCTCATAAACACACCGCCCTCGTCACAGTACATTTATGAGTGCTAGGCCTAGCAGAAGGGATGAGTTAGCAGTTACCTAATGA---GGTTTTGCAGATGTCGAATGCTC-AGGAGCATTGCTAATGAGCTAAAGAGCCCAGAGAGGGGCTTGGTC-TTCCCTCTCTCCTACAACACC----------------------------------------------------------------TGTAGAGTGTGGGTCT-------TCAAGCCCCTCACCC---GCCTTGTTCTCTAgaacttgaggcctagagagatggagggcctggctccatgttccacgaggcagacctggga--ctcaacagccaagtttattgaTATTTGGACCCCACACATTGGAGGTGGAGGACTAGACCCTGTCCCTCTATACTAGCCAGAACTGGG---CCCTGTCCCTCTACCCTGGCCAGGATCCAGACTCTGTTCCTCTGCTCTGGCCAGACCATAGGCGG-CCAGGCTGGACAGAGGCGGGTTCACCTGCCAGAAGAGAC--AGCTTGAAGTCAGACCATCTTT-ATGGGAGATCAGATGGCCCACAAGACACAGTGCT--ATGTTGTTGGGAACCCCCAGATATGACCCATGGTGGTTGGGAAGGTGTGGCCTGAGCCTTAGGTTGGGACAGCACCCATCAG---------------TCATCACTTCCAGTTAGAGGGTTCAAGGGTTCGAGGGTTCGAGGGTTCAGGGCTTTGGTTTAAGGAATCTTCCCCATGGGACTAAACATTGCAGTATTGTAAATGGGTTGGAATG i mm10.chr11 I 378 I 91 s canFam3.chr9 15627866 1242 - 61074082 GGCATTTCACAGGAAATGACT------CTGCACTTGGCTAGATG-TCCTTGGTTGGCAT-CTCTGGCTGGTGTCCAAGTGCCCTGGGAG-GAGGGCGCCCCCCCCTCCTGGGCTCTGGCCTAACATGTACCCCCAATTTCCA------------------CTATTCCTTGATTACTGGAGGAGCTCTTAGCATGTTGTGCTGAAAGAACCTTCTCTGTATTCATAGGAATGTCTTACCCAAAGGAGGGCCT--GAGGGACAAATTCTAAGCCCTGTGGCTGGTTGATGGAGAGG--CCTTTCAGGGTCTCTTGAAAatccatacattt----------------acaagtacttattcagcacctaggctgtgacaggctct--gttgcgttctgcagggggcctggtg----atgaaGTCCCCTTTGTCTTTAGATTCCAG-TGATGGAGGGCAGATCAGGAA----GGGACCTGGGAGCCTTCCACTCT-GGCCAATGGCTGCCTCCTC----CTTGCTCCACACGGTGGCCTCAGCATGGAGAGCATGGTGGAGTGCTGAGG-AAGCAAGTCACC-GCAAGCGTTTGCAGTGGAGCCTGTGGCTGCTGAG-GGCAAACTTGATGT--------------------------------GATAATTTATTATGCACA-----TTCTCATAAACAGATTACACTCGTCACAGTACATTTACAACCATTAGGTCTATCAGTGGGGAAAAGTTAACACTTACCTGATGA---TGTTTTGCAGATGTCAAATGTTCTTGGAACTGCCATCATGGGCTAAATGG--CTTAGAGATG-CTCGTC-GTCTTCCCCTTCTGGGACGCCTGTTCAGTGGTGTGTGGACCACAGACGTGTGAGCCCCTCACTCGCccccctcgattcctatgtgaggaaacag---gcctgtggagatggagaacctggcccaaggtcacacaaggtagagccagactcata---------------------------------------cccaggGGTTT----------------------------------------GGGTAGA-----------------------------AGGACCACAGCCCTGTCTCCCTCATGCAGGGTGTGG----------------TCTGTGCTGCTGGACAGGAAAGAGACCCCGGTGAGA--------AGCTCATCTGCTAGGAGGGGGCTTGCCTGGGATCAGGCTCCCTCTGGCTGGAGATCAGATGCCAGC-AAAAGATAATGCTGAATCTTA-AGGGAAGCTCCAGAAATGACCTGCTGGAGGACAAGA-GTGTAGCCTGAGGCTAGGGT---GACAGCACAGAGGAGGCAGTGGCCCCACCACC-CTGCCCTCA------------GAGACCTACGGGCCCCTGGAGCCAAGGGTCTTGTCTCAGT--GTCTCTGGGACTGGGGTGGTCATGTCAGCATTATGGGAG-GTTAGAATG i canFam3.chr9 C 0 C 0 a score=64208.000000 s hg38.chr17_GL383563v3_alt 126465 19 + 375691 AGTAGAAACTCTAACTAGC s panTro4.chr17 124735 19 + 82630442 AGTAGAAACTCTAACTAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 22667 19 + 73212453 GGTAGAAACTCTAACCAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79468 19 - 81552678 GGTAGAAACTCTAACCAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52291 19 + 80904711 GGTAGAAACTCTAACCAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 53198 19 + 80997621 GGTAGAAACTCTAACCAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 63495 19 + 74645514 GGTAGAAACTCTAACCAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 54700 19 + 75148670 GGTAGAAACTCTAACCAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869520 19 - 1291538 GGCAGAAATTTTAACAAAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15629108 19 - 61074082 GGCAGGAGCTCTAACTGGC i canFam3.chr9 C 0 I 232 e mm10.chr11 75801936 91 + 122082543 I a score=9428.000000 s hg38.chr17_GL383563v3_alt 126484 3 + 375691 CCA s panTro4.chr17 124754 3 + 82630442 CCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 22686 3 + 73212453 CCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79487 3 - 81552678 CCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52310 3 + 80904711 CCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 53217 3 + 80997621 CCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 63514 3 + 74645514 CTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 54719 3 + 75148670 CCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869539 3 - 1291538 CCA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75801936 91 + 122082543 I e canFam3.chr9 15629127 232 - 61074082 I a score=31628.000000 s hg38.chr17_GL383563v3_alt 126487 9 + 375691 GGGCTGGTG s panTro4.chr17 124757 9 + 82630442 GGGCTGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 22689 9 + 73212453 GGGCTGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79490 9 - 81552678 GGGCTGGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52313 9 + 80904711 GAGCTGGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 53220 9 + 80997621 GAGCTGGTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 63517 9 + 74645514 GGGCTGGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 54722 9 + 75148670 GGGCTGGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869542 9 - 1291538 GGGCTGGTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75802027 9 + 122082543 GGGCAGGAA i mm10.chr11 I 91 C 0 e canFam3.chr9 15629127 232 - 61074082 I a score=483893.000000 s hg38.chr17_GL383563v3_alt 126496 140 + 375691 GAAACCCAGGGCCAACAGCCACAAATGTTCCCTCCAATCGCTTTGAATTCATGATGCAATTCAAAGGAATTAACAATGCAAGTGGTAGCTTTCAATGATAACGTGTTCCACtttt----------tgtgtttgag--agagt-ctcactctgt s panTro4.chr17 124766 142 + 82630442 GAAACCCAGGGCCAACAGCCACAAATGTTCCCTCCAATCGCTTTGAATTCATGATGCAATTCAAAGGAATTAACAATGCAAGTGGTAGCTTTCAATGATAACGTGTTCCACtttt----------tgtgtttgagacagagt-ctcactctgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 22698 142 + 73212453 GAAACCCAGGGCCAACAGCCACAAATGTTCCCTCCAATCGCTTTGAATTCATGATGCAATTCAAAGGTATTAACAATGCAAGTGGTAGCTTTCAATGATAACGTGTTCCACCttt----------tgtgtttgagacagagt-ctcactctgt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79499 148 - 81552678 GAAACCCAGGGCCAACAGCCACAAATGTTCCCTCCAATCGCTTTGAATTCATGATGCAACTCAAAGGTATTCACAATGCAAGTGGTAGCTTTCAATGATGATGTGTTTCACTTTTT----GCGTGTGTGtttgagacagagt-ctcactctgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52322 152 + 80904711 GAAACCCAGGGCCAACAGCCACAGATGTTCCCTCCAATAGCTTTGAATTGATGATGCAATTCAAAGGTATTAACAATGCAAGTGGCAGCTTCCAATGCTAATGTGTTCCACCttttgttggtttgtttgtttgagacagagt-ctcactctgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 53229 152 + 80997621 GAAACCCAGGGCCAACAGCCACAGATGTTCCCTCCAATAGCTTTGAATTGATGATGCAATTCAAAGGTATTAACAATGCAAGTGGCAGCTTCCAGTGCTAATGTGTTCCACCttttgttggtttgtttgtttgagacagagt-ctcactctgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 63526 152 + 74645514 GAAACCCAGGGCCAACAGCCACAGATGTTCCCTCCAATAGCTTTGAATTGATGATGCAATTCAAAGGTATTAACAATGCAAGTGGTAGCTTCCAATGCTAATGTGttccactttttgtttgtttgtttgtttgagacagagt-ctcactctgt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 54731 148 + 75148670 GAAACCCAGGGCCAACAGCCACAGATGTTCCCTCCAATAGCTTTGAACTGATGATGCAATTCAAAGGTATTAACAATGCAAGTGGTAGCTTCCAATGCTAATGTGTTCCACttttt----gtttgtttgtttgagacagagt-ctcactctgt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869551 145 - 1291538 GAAACCCAGGGCCAACAGCCACCAATGTTCCCTCTAATAGCTCTGAGTTAAGGGTGCAATTCAAAGGTATTAACAATGCAAGTGGTAGCTGCCAATGATAAGCTGTTCCAtctttttt-------tttttttgatacagagt-ctccctctgt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75802036 139 + 122082543 GAAAACCA-AACTAATAATTTTGAAACTCAAGGCAAATGGCTTCAGATTAATGATGCAATTCAGAAGTATTAACAATGCAAGCAAGAACTTTCAATTATAGCTCACTTCACTTCT----------TACGTTTAA---AGAATGCTTCCCTTAT i mm10.chr11 C 0 I 1524 s canFam3.chr9 15629359 134 - 61074082 GAAATCCA-GGTCAATAGCCACAAATGTTCCCTCAAACAGCTTTATATTAATGATGCAATTCAGA---AAGCACAGCGCAAATAGTGGCTTCCAATTTTAACTCATTCTACTTTT----------AATGTTCAGGTAA-----CTCATTCTAC i canFam3.chr9 I 232 C 0 a score=1263.000000 s hg38.chr17_GL383563v3_alt 126636 1 + 375691 t s panTro4.chr17 124908 1 + 82630442 t i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 22840 1 + 73212453 t i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79647 1 - 81552678 c i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52474 1 + 80904711 t i rheMac3.chr16 C 0 C 0 s macFas5.chr16 53381 1 + 80997621 t i macFas5.chr16 C 0 C 0 s papAnu2.chr16 63678 1 + 74645514 t i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 54879 1 + 75148670 t i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869696 1 - 1291538 g i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15629493 1 - 61074082 t i canFam3.chr9 C 0 I 1666 e mm10.chr11 75802175 1524 + 122082543 I a score=775150.000000 s hg38.chr17_GL383563v3_alt 126637 266 + 375691 gcccaggctgaagtgcaatggcacgatctcggttcactgccacctccacctcccgggttcaaccaattttcctgcctcagcctcctgagtagctgggactacaggtgactgccaccatgtttggcgggcgtagttctttgtatttttagtagagatggggtttcaccatgttggccacgctggtcttgaattcctgacctcaggtgatctgcccgcctcagtctcccaaagtgctgggattacaggtgtgaaccaccacacctggc s panTro4.chr17 124909 266 + 82630442 gcccaggctgaagtgcaatggcacgatctcggttcactgccacctccacctcccaggttcaagcaattttcctgcctcagcctcctgagtagctgggactacaggtgactgccaccatgcttggcaggcgtagttctttgtatttttagtagagatggggtttcaccatgttggccacgctggtcttgaattcctgacctcaggtgatctgcccgcctcagtctcccacagtgctgggattacaggtgtgaaccaccacacctggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 22841 266 + 73212453 gcccaggctgaagtgcaatggcgcaatctcggttcactgccacctccacctcccaggttcgagcaattttcctgcctcagcctcctgagtagctgggactacaggtgactgccaccatgcttggcgggcatagttctttgtatttttagtagagatggggtttcaccatgttggccacgctggtcttgaattcctgacctcaggtgatctgcccacctcggtctcccaaagtgctgggattataggcgtgaaccaccacgcctggc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79648 266 - 81552678 gcccaggctgaagtgcaatggcacgatctcagttcactgccacctccacctcccaggttcaagcaattttcctgcctcagcctcctgagtagctgggactacaggtgactgccaccatgcttggtgggtgtagttctttgtatttgtagtagagatggggtttcaccatgttggccatacttgtcttgaattcctgacctcaggtgatctgcccacctcggtctcccaaagtgctgggattataggcatgaaccaccacgcctggc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52475 265 + 80904711 gcccaggctgaagtacaatgacatgatctcggctcactgcaacctccacctcccggcttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggtgactgccaccatgtttggcgggcatagtt-tttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaattcctgaccttaggtgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgaaacaccATTCCTCGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 53382 265 + 80997621 gcccaggctgaagtacaatgacatgatctcggctcactgcaacctccacctcccggcttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggtgactgccaccatgtttggcgggcatagtt-tttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaattcctgaccttaggtgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgaaccaccatgcctcgc i macFas5.chr16 C 0 M 100 s papAnu2.chr16 63679 265 + 74645514 gcccaggctgaagcacaatgacatgatctcggctcactgcaacctccgcctcccgggttcaagccattctcctggttcagcctcctgagtagctgggactacaggtgattGCCACCATGTTTGACGGgcacagtt-tttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaattcctgaccttaggtgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgaaccaccatgcctcgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 54880 265 + 75148670 gcccaggctgaagcgcaatgacgtgatctcggctcactgcaacccccgcgtcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggtgactgccaccacgtttggcgggcatagtt-tttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgaaccaccgtgcctcgc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869697 260 - 1291538 gcccaggctggagtgcagtggcatgatcacagctcactgcaacttctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccaccaggcctggc-----taattttttctattttgagaagagatggggtttcaccatattggccaggatggtcttgaattcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgagattatagacataagccaccacgcctag- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75802175 1524 + 122082543 I e canFam3.chr9 15629494 1666 - 61074082 I a score=19599.000000 s hg38.chr17_GL383563v3_alt 126903 33 + 375691 ACCCCCCCGCC---tttttttttttttttttttttt-- s panTro4.chr17 125175 31 + 82630442 A-CCCCCCGCC----ttttttttttttttttttttt-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23107 24 + 73212453 A-CCCCCCACC-----------Atttttttttttta-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79914 35 - 81552678 A-CCCCCCGCCttttttttttttttttttttttttt-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52740 19 + 80904711 ------CCCCt-----------tttttttttttttt-- i rheMac3.chr16 C 0 I 2 s papAnu2.chr16 63944 19 + 74645514 ------ccact-----------tttttttttttttt-- i papAnu2.chr16 C 0 I 3 s chlSab2.chr16 55145 19 + 75148670 ------cCACt-----------ttttttttttttta-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869957 22 - 1291538 -----ccCACt-----------tttttttttttcctta i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75802175 1524 + 122082543 I e canFam3.chr9 15629494 1666 - 61074082 I e macFas5.chr16 53647 100 + 80997621 M a score=456990.000000 s hg38.chr17_GL383563v3_alt 126936 156 + 375691 agagactggaccttgctttgttacccaggctggaatgccgtggagtgatcatggctcactgcagtcttgaactcctgggctcacgtgatcctcccatctcagcctcctcaatagccagaaccacagatatgcaccaccacgtccagttaatctttt s panTro4.chr17 125206 156 + 82630442 agagactggaccttgctttgttacccaggctggaatgccgtggagtgatcatggctcactgcagtcttgaactcctgggctcacgtgatcctcccatctcagcctcctcaatagccagaaccacagatatgcaccaccacgtccagttaatctttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23131 155 + 73212453 agagtctggaccttgctttgttacccaggctggaattcagtggagtgatcatggctcactgcagtcttgaactcctgggctcaagtgatcctcccatctcagcctcctgagcagccagaaccacagatatgcaccaccatgtccagctaat-tttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 79949 156 - 81552678 agagactggaccttgctttgttacccaggctggaatgcagtggagtgatcatggctcactgcagtcttgaactcctgggctcaagtgatcctcccatctcagcctcctgagtacccagaaccacagatatgcaccaccatgtccagctaatttttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52761 156 + 80904711 agagactggacctttctctgttacccaggctggagtgcagtggagtgatcatggctcactgcagtcttgaactcctgggctccagtgatcctcccacctcggcctcctgagtgtccagaaccacagacctgcaccaccatgtccagctaatttttt i rheMac3.chr16 I 2 C 0 s macFas5.chr16 53751 156 + 80997621 Agagactggaccttgctctgttacccaggctggagtgcagtggagtgatcatggctcactgcagtcttgaactcctgggctccagtgatcctcccacctcggcctcctgagtgtccagaaccacagacctgcaccaccatgtccagctaatttttt i macFas5.chr16 M 100 C 0 s papAnu2.chr16 63966 156 + 74645514 agagactggaccttgctctgttacccaggctggagtgcagtggagtgatcatggctcactgcagtcttgacctcctgggctccggtgatcctcccacctcggcctcctgagtgtCCAGAACCACAGAcctgcaccaccatgtccagctaatttttt i papAnu2.chr16 I 3 C 0 s chlSab2.chr16 55164 156 + 75148670 agagactggaccttgctctgttacccaggctggagtgcagtggagtgatcatggctcactgcagtcttgaactcctgggctccagtgatcctcccacctcagcctcctgagtggccagaaccacggacctgcaccaccatgtccagctaatttttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 869979 153 - 1291538 agggacagggccttgctctgttaccc-ggctgaagtgcagtggcatgatcatggctcact--agtcttgaactcctgggctcaagaaatcctcccacctcagcctcctgagtagccagaactatagacatgcaccaccacgcccagctaatctttt i calJac3.chrUn_GL286409 C 0 I 307 e mm10.chr11 75802175 1524 + 122082543 I e canFam3.chr9 15629494 1666 - 61074082 I a score=437133.000000 s hg38.chr17_GL383563v3_alt 127092 144 + 375691 tatgtttta-ttttttaaagatgggtcttgctatgttgcccaggctTACATGAACTGAGttttacatttactacaaatgtgtgtacctataaacaatatatggtattgttttgcaagctttaaaactttgtaaaaatggcatcat s panTro4.chr17 125362 144 + 82630442 tatgtttta-ttttttaaagatgggtcttgctatgttgcccaggctTACATGAACTGAGttttacatttactacaaatgtgtgtacctataaacaatatatggtattgttttgcaagctttaaaactttgtaaaaatggcatcat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23286 144 + 73212453 tatgtttta-ttttttaaagatgggtcttgctatgttgcccaggctTACATGAACTGGGTtttacatttactacaaatgtgtgtacctataaacaatatatggtattgttttgcatgttttaaaactttgtaaaaacggcatcat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 80105 144 - 81552678 tatgtttta-ttttttaaagatgggtcttgctatgttgcccaggctTACATGAACTTAGttttacatttactacaaatgtgtctacctataaacaatatatggtattgttttgcatgatttaaaactttgtaaaaatgtcatcat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 52917 145 + 80904711 tatgttttgtttttttagagatgggtcttgctatgttgcccaggcttacctgaactTAGttttacatttactacagatgtgtgtacctataaacaatatatggtattgttttgcatgctttaaaactttgtaaaaatggcatcat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 53907 145 + 80997621 tatgttttgtttttttagagatgggtcttgctatgttgcccaggcttacctgaactTAGttttacatttactacagatgtgtgtacctataaacaatatatggtattgttttacatgctttaaaactttgtaaaaatggcatcat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 64122 145 + 74645514 tatgttttgtttttttagagatgggtcttgctatgttgcccaggcttacaTGAACTTAGTTTTACATTTACTACAAATGTGTGTACCTATAAACAATATATGGTATTGTTTTGCATGCTTTAAAACTTTGTAAAAATGGCATCAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 55320 145 + 75148670 tatgttttgtttttttagagatgggtcttgctatgttgcccaggctTACATGAACTTAGttttacatttactacaaatgtgtgtacctataaacaatatatggtattgtcttgcatgctttaaaactttgtaaaaatggcatcat i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 870439 145 - 1291538 tatgttttatttttttagaggtgggtcttgctatgttgcctggactTACATGAACTTAGTTTTGCACttactacaaatgtgtgtacctgtaaacaatatatggtattgttctgcatactttaaaatgttatataaatggcatcat i calJac3.chrUn_GL286409 I 307 C 0 e mm10.chr11 75802175 1524 + 122082543 I e canFam3.chr9 15629494 1666 - 61074082 I a score=990344.000000 s hg38.chr17_GL383563v3_alt 127236 328 + 375691 actatacataacctca-ttaaactcatttttggcttattattatttgtgaagttttttcctgtagatgcatctagctatagtttgtttttattgctgtctactgttccactatgtgaatacgccataatttatttctcttttctcctattgttgaacatttaagctggttcctatgcgtggctatcatcaacatgctgcaatggct----------attcctgtttcctggtctgtatatggga-----tttctttttttgagacagggtctcactctattgcccaggcta---aagttcagtcgtaccatctcggctcaccacagcctcaacctccctgggctcag s panTro4.chr17 125506 328 + 82630442 actatacataacctca-ttaaactcatttttgacttattattgtttgtgaagttttttcctgtagatgcatctagctatagtgtgtttttattgctgtctactgttccactatgtgaatacgccataatttatttctcttttctcctattgttgaacatttaagctggttcctatgcgtggctatcatcaacatgctgcaatggct----------attcctgtttcctggtctgtatatggga-----tttctttttttgagacagggtctcactctattgcccaggcta---aagttcagtcgtaccatctcggcacactacagcctcaacctccctgggctcag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23430 322 + 73212453 actgtatgtaacctca-ttaaactcatttttgac---ttattgtttgtgaagttttttcctgttgatgcatctagctatagtttgtttttattgctgtctactgttccactatgtgaatacgccata----atttctcttttctcctattgttgaacatttaagttggttcctatgcgtagctatcatcaacatgctgcaatggct----------attcctgtttcctggtccatatatggga----ttttttttttttgagacagggtctcactctattgcccaggcta---aagttcaatcgtgccatctcggctcaccacagtctcaacctccctgggctcag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 80249 330 - 81552678 actgtatgtaacctca-ttaaactcgtttttgacttattattgtttgtgaagttttttcctgttgatgcatctagctatagtttgtttttattgc-gtctactgttccactatatgaatacgccataatttatttctcttttctcctattgttgaacatttaagttggttcctatgcgtggctatcatcaacatgctgcaatggct----------attcctgtttcctggtccatatatgggat--tttttttttttttgagacagggtctcactctattgcccaggcta---aagttcactcatgccatctcggctcaccacagcctcaacctccctgggctcag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 53062 325 + 80904711 actgcatgtaacctta-ttaaactcatttttgacttattattgtttgtgaagtttattcctgttgatgcatctagctatagtttgtttttattgttgtctactattccactatgtgaatacgccacaatttatttctcttttctgctattgttgaacatttaagttggttcctatgcatggctatcatcaacatgctgcaatggct----------attcctgtttcctggtccatctatggga--------tttattttgagacagggtctcactctgttgcccaggctg---aagttcagttgtaccatctcagctcagcacagcctcaagctccctgggctcag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 54052 325 + 80997621 actgcatgtaacctta-ttaaactcatttttgacttattattgtttgtgaagtttattcctgttgatgcatctagctatagtttgtttttattgttgtctactattccactatgtgaatacgccacaatttatttctcttttctgctattgttgaacatttaagttggttcctatgcatggctatcatcaacatgctgcaatggct----------attcctgtttcctggtccatctatggga--------tttattttgagacagggtctcactctgttgcccaggctg---aagttcagttgtaccatctcagctcagcacagcctcaagctccctgggctcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 64267 325 + 74645514 ACTGTATGTAACCTTA-TTAAACTCATTTTTGACTTATTATTGTTTGTGAAGTTTATTCCTGTTGATGCATCTAGCtatagtttgtttttattgttgtctaCTATTCCACTATGTgaatatgccataatttatttctcttttctgctaTTGTTGAACATTTAAGTTGGTTCCTATGCATGGCTATCATCAACATGCTGCAATGGCT----------ATTCCTGTTTCCTGGTCCATATATGgga--------tttattttgagacagggtctcactctgttgcccaggctg---aagttcagttgTACCATCTCAGCTCAGCACAGCCTCAagctccctgggctcag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 55465 325 + 75148670 actgtatgtaacctta-ttaaactcatttttgacttattattgtttgtgaagtttattcctgttgatgcatctagctatagtttgtttttattgttgtctactattccactatgtgaatacgccataatttatttctcttttctcctattgttgaacatttaagttggttcctatgcatggctatcatcaacatgctgcaatggct----------attcctgtttcctgctccatatatggga--------tttattttgagacaggatctcactctgttgcccaggctg---aagttcagttgtaccatctcagctcagcacagcctcaagctccctgggctcag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 870584 326 - 1291538 tctgtacatatcctca-ttaatcttatttttgacttactattgcttgtgaaatttattcctgttgatgcatctagcgacagtgtgtttttactgctgtctactattccactatgtgaatacggcataattt-tttctcttttctcctattgttggacatttaagttagttcctatgtgtgactatcatcaacatgctacaatggct----------attcctgtttgctggtccacatatgggacagatttttttttttt------gggtctcactctattgcccaggctg---aagttcagtagtgccatcttggctcatggcagcctcaacctccccaggctcag i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75803699 313 + 122082543 accacacccagcCTTAGTTCGttttcttactatttcattgttgtttctaagatttattccagct-atgtatatagctacagtttgctctcaccactacaaattgtcccacaaggtgaacacagtatacgatctttctcctttcctctgtttttgagcagttaagctgatctctttgcttggctatcaccaatactttataaTGCTTATCACTATTCATTTCTTTTTCCTTTTCTTTCTGTGGAG-------------CTGGAGAACCAAACTCAAGCCCTGGAGCATGCTACACACCTCCAGTCCTGTT-TCTCGGTTCCATATAA-------------------AG i mm10.chr11 I 1524 C 0 e canFam3.chr9 15629494 1666 - 61074082 I a score=208883.000000 s hg38.chr17_GL383563v3_alt 127564 97 + 375691 gcggtcctcccacctcagcctcccgagtag--------------ctgggactgc-aggc-----gcataccaccacatctggctaatttttataatttttgt---------------------------------------------------agagaaaggg-tttgc s panTro4.chr17 125834 97 + 82630442 gcgatcctcccacctcagcctcccgagtag--------------ctgggactgc-aggc-----gcataccaccacatctggctaatttttataatttttgt---------------------------------------------------agagaaaggg-tttgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23752 97 + 73212453 gtgatcctcccacctcagcctcccaagtag--------------ctgggactgc-aggt-----gcacaccaccacatctggctaatttgtataacttttgt---------------------------------------------------agagagaggg-tttgc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 53387 98 + 80904711 gtgatcctcccacctcagcctcccaagcag--------------ctgggactgc-tggc-----gcacaccaccacatctggctaatttttataatttttgt---------------------------------------------------agagacaggcttttgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 54377 98 + 80997621 gtgatcctcccacctcagcctcccaagcag--------------ctgggactgc-tggc-----gcacaccaccacatctggctaatttttataatttttgt---------------------------------------------------agagacaggcttttgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 64592 98 + 74645514 gtgatcctcccacctcagcctcccaagcag--------------ctgggactgc-tggc-----gcacaccaccacgtctggctaatttttataatttttgt---------------------------------------------------agagacaggcttttgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 55790 98 + 75148670 gtgatcctcccacctcagcctcccaagcag--------------ctgggactgc-tggc-----gcacaccaccacatctggctgatttttataatttttgt---------------------------------------------------agagacagggttttgc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 870910 97 - 1291538 gtgatcctcccacctaagcctcccaagtag--------------ctggaactgc-aggt-----gcacgccaccacatctggctaatttttgtattttttgt---------------------------------------------------agagatagtg-tttgc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75804012 163 + 122082543 ATATTTCTTTCA----AATTTCCCAAATAGATGATTGTTAAGCTCTAGGATTGTGTGGCTTTTAATAAATTATTA-GTGTGTTTATTTATTATAATGTATATATCATGGTGTGTGTGTgagagagagagagaaagagagagagagagagagagagagagagag-catgc i mm10.chr11 C 0 I 122 e canFam3.chr9 15629494 1666 - 61074082 I e nomLeu3.chr19 80579 0 - 81552678 C a score=83450.000000 s hg38.chr17_GL383563v3_alt 127661 37 + 375691 caggttgcccaggctagtctgaaactcctgagctcaa s panTro4.chr17 125931 37 + 82630442 caggttgcccaggctagtctgaaactcctgagctcaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23849 37 + 73212453 caggttgcccaggctagtctgaaactcctgagctcaa i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 53485 37 + 80904711 catgctgccctggctggtctgaaacccctgagctcaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 54475 37 + 80997621 catgctgccctggctggtctgaaacccctgagctcaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 64690 37 + 74645514 catgttgccctggctggtccgaaacccctgagctcaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 55888 37 + 75148670 catgttgcccaggctggtctgaaacccctgagctcaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 871007 37 - 1291538 catgttgctcaggctgatctcaaactcctgagctcaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804175 122 + 122082543 I e canFam3.chr9 15629494 1666 - 61074082 I e nomLeu3.chr19 80579 0 - 81552678 C a score=291493.000000 s hg38.chr17_GL383563v3_alt 127698 97 + 375691 gtgatcctcccacctcagcctcgcaaagtgctgggattacaggcgtgtgccaccacacctggccagggagagtttctttagagtttcttggatagga s panTro4.chr17 125968 97 + 82630442 gtgatcttcccacctcagcctcgcaaagtgctgggattacaggcgtgtgccaccacacctggccagggagagtttctttagagtttcttggatagga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23886 97 + 73212453 gtgatcctcccacctcagcctcccaaagtgctgggattacaggcgtgtgccacaacacctggccagggagagttgctttagagtttcttggatagga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 80579 97 - 81552678 gtgatcctcccacctcagcctcccaaagtgctgggattacaggtgtgtgccaccacaactggccaGGgagagtttctttagagtttcttggatagga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 53522 97 + 80904711 gtgatcctcccacctcagcctcccaaagtgctgggattacaggcatgagccaccacagctggccagggagagtttctttagagtttcttggatagga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 54512 97 + 80997621 gtgatcctcccacctcagcctcccaaagtgctgggattacaggcatgagccaccacagctggccagggagagtttctttagagtttcttggatagga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 64727 97 + 74645514 gtgatcctcccacctcagcctcccaaagtgctgggattacaggcatgagccaccacagctggccaggGAGAGTTTCTTTAGAGTTTCTTGGATAGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 55925 97 + 75148670 gtgatcctcccacttcagcctcccaaagtgctgggattacaggcatgagccaccacagctggccagggagagtttctttagaatttcttggatagga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 871044 85 - 1291538 gtgatcctcccacctcagcctcccaaagtgct-ggattacaggtatgtgccaccatgcctggccagggagag-----------tttcttggatagga i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804175 122 + 122082543 I e canFam3.chr9 15629494 1666 - 61074082 I a score=872459.000000 s hg38.chr17_GL383563v3_alt 127795 280 + 375691 aatttgctgggcctagggtctgtatatctttaccttgactagagagtgcctagctgctccccaaactggttagaaccacggccattctcaccaaccatctgtaacagtgccagttcctccttgtccttgtcaacacttggtattgccagacttgaatttttgctagtctgctagg--t---------ttt------tttt---atgtttaattagttctccttgctaacta-gtgCTACTTCATTTCTGCTGCTAAGGGTGGGCATGTGCTGTCAATAGAtaaacgcaacagattaaaaat s panTro4.chr17 126065 280 + 82630442 aatttgctgggcctagggtctgtatatctttgccttgactagagagtgcctagctgctccccaaactggttagaaccacagccattctcaccaaccatctgtaacagtgccagttcctccttgtccttgtcaacacttggtattgccagacttgaatttttgctagtctggtagg--t---------ttt------tttt---atgtttaattagttctccttgctaacta-gtgCTACTTCATTTCTGCTGCTAAGGGTGGGCATGTGCTGTCAATAGAtaaatgcaacagattaaaaat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 23983 283 + 73212453 aatttactgggcctagggtctgtatatctttagcttgactagagagtgcctagctgctccccaaactggttagaaccatcgccattctcaccaaccatctgtaacagtgccagttcctccatgtccttgtcaacacttggtattgccagacttgaattttcgctagtctggtaggtTT---------TTT------TTTT---AAGTTTAATTAGTTCTCCTTGCTAACTAGGTGCTACTTCATTTCTGCTGCTAAGGGTGGGCATGTGCTATCAATAGATAAATGCAACAAATTAAAAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 80676 281 - 81552678 aatttgctggatctagggtctgtatatctttagcttgactagagagtgcctagctgcttcccaaacttgttagaaccattgccattctcaccaaccatctatgacagtgccagttcctccatgtccttgtcagcacttggtattgccagacttgaatttttgctagtctggtagg--t---------ttt------tttt---gtatttaattagttctccttgctaactagGTGCTACTTCATTTCTGCTGCTAAGGGTGGGCATGTGCTAGCAATAGAtaaatgcaacaaattaacaat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 53619 283 + 80904711 aatttgctgggcctaaggtctgcatacctttggcttgactagagaatgcctagcttcttcccaaactggttaggacaattgccactctcaccaacgatctataacagtgccagttcctccatgtccttgtcaacacttggtattgccagacttgaatttttgctagtctgatagT--T---------TTT------TTTT-TAATGTTTAATTAGTTCTCCTTGCTAAGTAGGTGCTACTTCATTTCTGCAGCTAAGGGTGGGCATGTGGTATCAATAGAtaaatgcaacagattaaaaat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 54609 283 + 80997621 aatttgctgggcctaaggtctgcatacctttggcttgactagagaatgcctagcttcttcccaaactggttaggacaattgccactctcaccaaccatctataacagtgccagttcctccatgtccttgtcaacacttggtattgccagacttgaatttttgctagtctgatagT--T---------TTT------TTTT-TAATGTTTAATTAGTTCTCCTTGCTAAGTAGGTGCTACTTCATTTCTGCAGCTAAGGGTGGGCATGTGGTATCAATAGAtaaatgcaacagattaaaaat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 64824 280 + 74645514 AATTTGCTGGGCCTAAGGTCTGCATACCTTTGACTTGACTAGAGAGTGCCTAGCTTCTTCCCAAACTGGTTAGAACAATTGCCACTCTCACCAACCATCTATAACAGTGCCAGTTCCTCCAtgtccttgtcaacacttggtattgCCAGACTTGAATTTTTGCTAGTCTgatagt--a---------ttt------tttt----tgtttaattagttCTCCTTGCTAAGTAGGTGCTACTTCATTTCTGCAGCTAAGGGTGGGCATGTGGTATCAATAGATAAATGCAACAGATTAAAAAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 56022 283 + 75148670 aatttgctgggcctaaggtctgcatacctttggcttgactagagagtgcctggcttctccccaaactggttagaacaattgccactctcaccaaccatctataacagtgccag-tcctccatgtcctcgtcaacacttggtattgccagacttgaatttttgctagtctgatagT--T---------TTT------TTTTTTAATGTTTAATTAGTTCTCCTTGCTAAGTAGGTGCTACTTCATTTCTGCAGCTAAGGGTGGGCATGTGGTATCAATAGAtaaatgcaacagattaaaaat i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 871129 290 - 1291538 cattcgctgagctgaagggctgtatatctttagcttgactagagagtgtgtagctgctccccaaactggttctaaccattgccaatctcaccaaccgtccataacggcaccacctcctccatgtccttgtcaacacttggtatcgccagacttgaatttttgctagtttgatagg--tgtgaacagagtt------tttt---gtatttaattagttctcctggctaattagGAGCTACTTCATTTCTGCTGCTAAGGGTGGACACATGCCATCAATAGATAAATGCAACAAATTAAAAAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75804297 278 + 122082543 attttgccag--ctcAGGATCATgcatctttagattgattatatattgccaaacttctctccaaaatgattacaatgacttctactcctaccggccatt-----cactccctgtcactccaagtccttctaaacactt-gtagtttcagacttGGATTTCCATTGGTCCAGAAGA--T---------ATTCAAGAGTTTT---ACGGATGTTTGATTTGCCCTTTTAACTC-ATGCTAGTTCACGTCTGCTGCTGATGGTGGGTATGTGGCACCAATAGATGAATGTCTCAAGTTGAAAGT i mm10.chr11 I 122 I 2598 e canFam3.chr9 15629494 1666 - 61074082 I a score=504254.000000 s hg38.chr17_GL383563v3_alt 128075 192 + 375691 tgaagagcttccatcaataagggattggctaaa-----------------------------------------------------------------------tacagtatgcctcacctgtacaatagaatactgcacaatcattaacaaagatgagtgtgctgatatggaagagatattgatattctgatgtactaaatatcttttcatctcccagatttattgtt-----acaaagcaagaggcataaaaagcatattcccttt s panTro4.chr17 126345 192 + 82630442 tgaagagcttccatcaataagggagtggctcaa-----------------------------------------------------------------------tacagtatgcctcacctgtacaatagaatactgcacaatcattaacaaagatgagtgtgctgatatggaagagatattgatattctgatgtactaaatatcttttcatctcccagatttattgtt-----acaaagcgagaggcataaaaagcatattcccttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 24266 197 + 73212453 TGAAGAGCTtctatcaataagggattggctaaa-----------------------------------------------------------------------tacagtatgcctcacctatgcaatagaatactgcataaccattaacaaagatgtgtgtgccgatatggaagagatattgatattctgatgtactaaatatcttttcatctcccagatttattgttaaataaaaaagcaagaggcataaaaagcatattcccttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 80957 196 - 81552678 taaagagcttctatcaataa-ggattggctaaa-----------------------------------------------------------------------tacagtatgcctcgcctatgcaatagaatactgcacaaccattaacaaagatgtgtgtgctgatatggaagagatattgatatactgatgcactaaatatcttttcatctcccagatgtattgttaaataaaaaagcaagaggcataaaaagcatattcccttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 53902 197 + 80904711 tgaagagcttctatcaataagggattggctaaa-----------------------------------------------------------------------tacagtatgcctcacctatacaatagaatacggcacaaccattaacaaggatgtgtgtgctgatatggaagatatattgatattctgatgtacaaaataccttttcatctctcagatttattgttaaataaaaaagcaagaggcataaaaagcatattcacttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 54892 197 + 80997621 tgaagagcttctatcaataagggattggctaaa-----------------------------------------------------------------------tacagtatgcctcacctatacaatagaatacggcacaaccattaacaaggatgtgtgtgctgatatggaagatatattgatattctgatgtacaaaataccttttcatctctcagatttattgttaaataaaaaagcaagaggcataaaaagcatattcacttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 65104 197 + 74645514 TGAAGCGCTTCTATCAATAAGGGATTGGCTAAA-----------------------------------------------------------------------TACAGTATGCCTCACCTATACAATAGAATACGGCACAAACATTAACAAGGATGTGTGTGCTGATATGGAAGATATATTGATATTCTGATGTACAAAATACCTTTTCATCTCTCAgatttattgttaaataaaaaagcaagaggCATAAAAAGCATATTCACTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 56305 160 + 75148670 tgaagagcttccatcaataagggattggctaaa-----------------------------------------------------------------------tagagtatacctcacctatacaatagaatacggcacaaccattaacaaggatgTGTGTGCCGATA-GGAAGATATATTGATATTCTGATGTACAAAATACCTTTTCATCTCTCAGATTTATTGT------------------------------------ATCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 871419 268 - 1291538 TGAAGAGCTTCTACCTATAAGGGATTGGCTAACCTTATAGATTAGTATATACTAATGATACATAGTAATATATATAACAATATATAAATTAGTATATACAACCTTATAGTATGCCTCACCTGTACAACAGAACACTACACGACCAATAAAAAGGATGTGTGCGCTGATACAGAGGATATACTGGTATTCTGATGTAATAAATATCTTTTCATCTCTAAGACTTATTGTTAAATAAAAAAGCAAGAGGCATAAAAAGCATATTCCCTTT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15629494 1666 - 61074082 I a score=1069837.000000 s hg38.chr17_GL383563v3_alt 128267 391 + 375691 gtaaataaatgaaaagatatgtatacacatgcatatttgtatgtatatgcgcagaatacctctgaaagaatgaacaggaaactggtaaccacagttcatctgggaagagcactagaggacagggaaac--TTTTTTGCTCTGTGAATTCTTACCACGCATGTGTATTAGCCTGTTGG-AAAAAATTAGC---cctagaataggcaaattcgtagagactgaaagtagaatagaggttgccagaggttttggggtagagaatagggggtttttatttgatagatgc--attttctgtttgagatgatgagagagttctgaaatggatagtggtgatggttgtacaacattgtgattgtacttaatgccactcaactgtacacttaaaagcggttgaaatg s panTro4.chr17 126537 391 + 82630442 gtaaataaatgaaaagatatgtatacacatgcgtatttgtatgtatatgcacagaatacctctgaaagaatgaacaggaaactggtaacaacagttcatctgggaagagcactagaggacagggaaac--TTTTTTGCTCTGTGAATTCTTACCACGCATGTGTATTAGCCTGTTGG-AAAAAATTAGC---cctagaataggcaaattcgtagagactgaaagtagaatagaggttgccagaggttttggggtagagaatagggggtttttatttgatagatgc--attttctgtttgagatgatgagagagttctgaaatggatagtggtgatggttgtacaacattgtgattgtacttaatgccactcaactgtacacttaaaagcggttgaaatg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 24463 393 + 73212453 gtaaataaatgaaaagatatgtatacacatgaatattggtatgtatatgcacagaatacctctgaaagaatgaacaggaaactggtaacaacagttcatctgggaagagcactagaggacagggaaaC--TTTTCTGCTCTGTGAATTCTTACCAGGCATGTGTATTAGCCTGTTGG-AAAAAATTAGC---cctagaataggcaaattcacagagattgaaagtagaatagaggttgccagatgttttggggtagagaatagggggtttttatttgatagatgcagagtttctgtttgagatgatgagagagttctgaaatggatagtggtgatggttgtacaacattgtgattgtacttaatgccactcaactgtacacttaaaagcggttgaaatg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 81153 393 - 81552678 gtaaataaatgaaaagttatgtatacacgtgcatatttgcatgtatacgcacaggatacctctgaaagaataaacaggacactggtaacagcagttcatctgggaagagcgctagaggacagggAAAC--TTTTCTGCTCTGTGAATTCTTAccacgcatgtgtattagtctgttgg-aaaaaattagc---cctagaataggcaaattcatagagactgaaagtacaatagaggttgccagaggttttggggtagagaatagggggtttttacttgacagatgcagagtttctgtttgagatgatgagagagttctgaaatggatggtggtgatggttggacaacactgtgactgtacttaatgccactcaactgtacacttaaaagcggttgaaaAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 54099 377 + 80904711 gtaaacaaatgaaaggatatgtatacacatgcctatttgtatgt----gcacagaatatctctgaaagaaggaacaggaaactggcgacagcagttcatctgggaagggCA------------GAAAC--TTTTCTGCTCCGTGAATTCTTAccatgtatgtgtattagcccgttggaaaaaaaatagc---cctagaataggcaaattcatagagacagaaggtagaatagaggttaccagaggttttggagtggagaatagggggtttttagttgactgatgcagagtttctttttgagatg-tgagagagttctgaaatggatactggtgatggttgtacaacattgtgattgtacttaatgacactcaactggatgcttaaaagttgttgaaatg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 55089 377 + 80997621 gtaaacaaatgaaaggatatgtatacacatgcctatttgtatgt----gcacagaatatctctgaaagaaggaacaggaaactggcgacagcagttcatctgggaagggCA------------GAAAC--TTTTCTGCTCCGTGAATTCTTAccatgtatgtgtattagcccgttggaaaaaaaatagc---cctagaataggcaaattcatagagacagaaggtagaatagaggttaccagaggttttggagtggagaatagggggtttttagttgactgatgcagagtttctttttgagatg-tgagagagttctgaaatggatactggtgatggttgtacaacattgtgattgtacttaatgccactcaactggatgcttaaaagttgttgaaatg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 65301 386 + 74645514 GTAAACAAATGAAAggatatgtatacacatgccTATTTGTATGT----GCACAGAACATCTCTGAAAGAATGAACAGGAAACTGGCGACAGCAGTTCATCTGGGAAGAGCACGAGGGGACAGGGAAAC--TTTTCTGCTCCGTGAATTCTTACCATGTATGTGTATTAGCCCGTTGG-AAAAAATTAgc---cctagaataggcaaattcatagaggcagaaagtagaatagaggttaccagagGTTTTGGAGTGGAGAATAGGGGGTTTTTAGTTGATTGATGCagagtttctttttgagatg-t--GTGAGTTCTGAAATGGATactggtgatggttgtacaacattgtgattGTACTTAATGCCACTCAGCTGGATGCTTAAAAGTTGTtgaaatg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 56465 361 + 75148670 AACAATAAAT--aaggataggtatacacacgcctatttgtatgt----gcacagaatatctctgaaagaatgaacaggaaactggcgacagcagttcatctgggaagagcacgaggggacagggaaac----TTCTGCTCTGTGAATTCTTAccatgtatgtgtattagcccgttgg-aaaaaattacc---cctggaataggcaaattcatagagacagaaagtagaatagaggttaccagaggttttggagtggagaatagggggtttttagttgattgatgcagagtttctttttgagatg-t--gtgagttctgaaatggata---------------------tgtgattgtacttaatgccactcaactggatgcttaaaagttgttgaaatg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 871687 365 - 1291538 GT----AAATGAAAGGAGACGTGTACACATACAGATTT-TATGTACATGCACAGAATACCTCTGAAAGAATGAACAGGAAA-TGAAAAGAGCAGTTCATCTGGGAAGAGCACCCGAGGACAGGGAAAC---TTTCTGCTCTGTGAATTTTTAccacatatgtgtattagcctgttag-aaaaaataagc---cctagaataggcaaattcatagagacagaaagtagaatagaggttaccaggggtttcagggtggagaagacgtggttattctttcacagatgcagagtttctg-tggaggcgatgaaagagttctgtagtggatagtggtgatg-------------------ggacttaatgccact-aactgtatactcagaagtggttgaaagg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15631160 345 - 61074082 gtaaataaataaataaataaata----------aattt--------------aaaaaatctttaaaaaaaTAAA----------------ATAGTTCATCTGGGAAGGGAATTGGGGGATAGGGAGACATTTTTCTGCTCTGTGCACTTTTACTACATACATGTATTACCAACTCAA-AAAAAAAAAATCAGcctggaatagatgaattgagagagatagaaagtat-atagaagttaccagaggctt-------gaggggcggtggttattttttaatgattatggagtttctctttgggaagatgaaaaagttctagaa---atagcagtgattcttgcacaacgttgtgaaagtacttagc-ccact-gatcatactcttaaaaatggtgaacatg i canFam3.chr9 I 1666 I 1732 e mm10.chr11 75804575 2598 + 122082543 I a score=1608108.000000 s hg38.chr17_GL383563v3_alt 128658 626 + 375691 ggctgggcacggtggctcacacctggaatcccagcgcttcgggaagccaaggtgggcagatcacctgaggtcaggagttcatgaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtggtcgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcacgccactgtactccagcctgggcaacagaagtgagacctcatctc----aaaaaaaa--aaaaaaTGTTGAAATggcctggcacaatggttcacacctgtaatcccagccctcagggatgccaaggcaagaggatcacttgagc-ccaggagtttgagaccagcctgggaaagatggtgagactctgtctctacaaaatg-ttttttaaaaattagctgggtgcagtggtgcacaccctgtggtcccagctgctggggaggctgaggcgggaggattgcttgagcctaggTtgtggtcccagctgctggggaggctgaggcgggaggattgcttgagcctaggaggttgaggctgcagtgaatcatgttctcagcactgcactccagtctgggcaa s panTro4.chr17 126928 625 + 82630442 ggctgggcacggtggctcacacctggaatcccagcgcttcgggaagccaaggtgggcagatcacctgaggtcaggagttcacgaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtggtcgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcacgccactgtactccagcctgggcaacagaagacagaccgcatctc-----aaaaaat--aaaaaaTGTTGAAATggcctggcacaatggttcacacctgtaatcccagccctcagggatgccaaggcaagaggatcacttgagc-ccaggagtttgagaccagcctgggaaagatggtgagactctgtctctacaaaatg-ttttttaaaaattagctgggtgcagtggtgcacaccctgtggtcccagctgctggggaggctgaggcaggaggattgcttgagcctaggttgtggtcccagctgctggggaggctgaggcgggaggattgcttgagcctaggaggttgaggctgcagtgaatcatgttctcagcactgcactccagtctgggcaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 24856 571 + 73212453 ggctgggcacggtggctcacacctgtaatcccagctcttcgggaggccgaggtgggcagatcacctgaagtcaggagttcacgaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggtggtcgcctataatcccagctactcaggaggctgaggcaggagaatcccttgaacctgggaggtagagattgcagtgagccaagaccatgccactgtactccagcctgggcaacagaagcgagaccgcatctc-----aaaaaaa--aaaaaaTGTTGAAATggcctggcacaatggttcacacctataatcccagcatttagggatgccaaggcaagaggatcacttgagc-ccaggagtttgagaccaggctgggaaagatggtgagactctttctctacaaaatg-ttttttaaaaattagccgggtgcagtggcgcacacc-----------------------------------------------------ttgtggtcccagctgctggggaggctgaggcaggaggattgtttgagcctcggaggttgaggctgcagtgaatcatgttctcagcactgcact-caatctgggcaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 81546 578 - 81552678 ggccgggcacgatggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtcaggagttcacgaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtgatggtcgcctataatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccaagatcatgccactgtactccagcctgggcaacagaagcgagaccgcatctcaaaaaaaaaaaa--aaaaaaTGTTGAAATggcctggcacaatggctcacccctgtaatcccagcacttagggatgccgaggcaagaggatcacttgagc-ccaggagtttgagaccagcctggggaagatggtgagactctgtctctacaaaatgtttttttaaaagttagccaggtgcagtggcacacaccttgtagtcc-----------------------------------------------------cagctgctggggttgctgaggtaggaggattgcttgagcctaggaggttgaggctgcagtgaatcatgttctcagcactgcactccagtctgggcaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 54476 570 + 80904711 ggctgggcacggtggctcacccctgtaatcccagcacttcgggaggccgaggtgggcagatcacctgaggtcaggagtttacgaccagcctggccaacatggtgaaactctgtctctactaaaaatacaaaaatgagccgggcgtggtggtggtcgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcatgccaccgtactccagcctgggctacaggagcgagaccgcatctc-----aaaaaaa-caaaGGGGGTTGAAGTggcctggcacagtgggtcacacctgtaatcccagcacttagggatgccaaagcaa---gatcactcgagccccaggagtttgtgaccagcctgagaaagatggtgagactgtgtctctacaaaatg-tttttaaaaaattagccgggtgcagtggcgcacatcctgtggtcc-----------------------------------------------------cagctactcgggaggctgaggcagg-ggattgcttgagcttaggaggtggaggttgcagtgagtcatgttctcagcaccgccctccagtctgggcaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 55466 569 + 80997621 ggctgggcacggtggctcacccctgtaatcccagcacttcgggaggccgaggtgggcagatcacctgaggtcaggagtttacgaccagcctggccaacatggtgaaactctgtctctactaaaaatacaaaaatgagccgggcgtggtggtggtcgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcatgccaccgtactccagcctgggcgacaggagcgagaccgcatctc-----aaaaaaa--aaaaaGGGTTGAAGTggcctggcacagtgggtcacacctgtaatcccagcacttagggatgccaaagcaa---gatcactcgagccccaggagtttgtgaccagcctgagaaagatggtgagactgtgtctctacaaaatg-tttttaaaaaattagccgggtgcagtggcgcacatcctgtggtcc-----------------------------------------------------cagctactcgggaggctgaggcagg-ggattgcttgagcttaggaggtggaggttgcagtgagtcatgttctcagcaccgccctccagtctgggcaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 65687 572 + 74645514 ggctgggcacggtggcccacccctgtaatcccagcacttcgggaggccgaggtgggcagatcacctgaggtcaggagtttacgaccagcctgaccaacatagtgaaacgccgtctctactaaaaatacaaaaatgagccgggcgtggtggtggtcgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaatctgggaggtggaggttgcagtgagccaagatcatgccaccgcactccagcctgggcgacaggagtgagaccgcatctc-----aaagaaaaaaaaaaaggttgaagtggcctggcacagtgggtcacacctgtaatcccagcacttagggatgCCAaggcaa---gatcacttgagctccaggagtttgtgaccagcctgagaaagatggtgagactgtgtctctacaaaatg-ttttttaaaaattagccgggtgcagtggcgcacaccctgtggtcc-----------------------------------------------------cagctactcgggaggctgaggcaggaggattgcttgagcctaggaggtggaggctgcagtgagtcatgttctcagcactgccctccagtctgggcaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 56826 569 + 75148670 ggctgggcgcggtggctcacccctgtaatcccagcacttcgggaggccgaggtgggcggatcacctgaggtcaggagtttatgaccagcctgaccaacatggtgaaacgctgtctctactaaaaatacaaaaatgagccgggcgtggtggtgggtgcctataatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcatgccactgtactccagcctgggcgacaggagcgaaactgcatctc-----aaaaaaaaaaaaaaaGGTTGAAGTggcctggcacagtgggtcacacctgtaatcccagcacttagggatgccaaggcaa---gatcacttgagccccaggagtttgtgaccaacctgagaaagatggtgagactgtgtctctacaaaatg-ttttttaaaaattagccggatgcagtggcgcacatcctgtggtcc-----------------------------------------------------cagctactcgggaggctgaggcaggaggattgcttgagcctaggaggtggaggctgcagtgagtcatgttctcagcactgccctccagtctggg--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 872052 564 - 1291538 ggccgggtgcggtggctcacacctgtagtcccagcacttcaggaggctgagggaagtggatcacctgagttcaggagtttgagaccagcctggccaacatgatgaaatctcatcgctactaaaaatacaaaaattatctggatgtggtgatggatgcctgcaatcccagctactcaggaggctagggcaggagaattgcttgaatgggggaggtggaggttgcaatgagccaagatcatgccactgtactctagcctggacgacgagagagagactccatcta-----aaaaaaa-----taaGGTTGAAATggccaggcacagtggttcatgcctataatcccagtactcagggatgccaagccaggaggaccacttgagc-ctaggaatttgagaccaacttgggaaagatggtgagactctgtctctacaaaatt-tttt----agattagctgggtgcagtggtctgcagcttgtggtcc-----------------------------------------------------cagctacttggga-actgaggcaggaggactgcttgagcctaggaggttgaggttgcagtgaatcatgttctcaccactgcactccagtctgggcaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I a score=91621.000000 s hg38.chr17_GL383563v3_alt 129284 54 + 375691 cacagtgagaccctgtctc----aaaaaaaaaagaaggaaagaaagaaggaaggaagg-- s panTro4.chr17 127553 54 + 82630442 cacagtgagaccctatctc----aaaaaaaaaagaaggaaagaaagaaggaaggaagg-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25427 58 + 73212453 cacagtgagaccctgtctcaaaaaaaaaaaaaagaaggaaagaaagaaggaaggaagg-- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 55046 51 + 80904711 cacagtgagaccctgtctc----aaaaacaaagaaaagaaggaaagaag--aagaag--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56035 51 + 80997621 cacagtgagaccctgtctc----aaaaacaaagaaaagaaggaaagaag--aagaag--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66259 51 + 74645514 cacagtgagaccctgtctc----aaaaacaaagaaaagaaggaaagaag--aagaag--- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 57395 49 + 75148670 --cagtgagaccctgtctc----aaaaacaaagaaaagaaggaaagaag--aagaag--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 872616 52 - 1291538 cacagtgagactctgtctc----aaaaaaaagaaaaagaaa-aaggaaa--aagaaA-Tg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I e nomLeu3.chr19 82124 0 - 81552678 C a score=106263.000000 s hg38.chr17_GL383563v3_alt 129338 183 + 375691 aaagaaaagaaataaagaaag------aaagagaaagaagagaaagagaaagaaagagaaaaagaag------aaagaagaaagagaaagaaagagagaaagaaagaaagaaagaaagaaa-gaaagaaagaaagaaagaaagaaagaaagaaagaaggaaagaaagaaaggaaagaaagaaagaagaaagaaaAg s panTro4.chr17 127607 99 + 82630442 aaaga------------aaag------aaagagaaagaagagaaag----agagagagaaaaagaag------aaaga----------------agagaaagaaagaaag---gaaggaag-gaaagaaagaaagaaagaaag-------------------------------------------------aaag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25485 111 + 73212453 caaga------------aaag------aaagaaggaagaaagaaag----agggaaagaaaga-aag------aaaaa--------------gaagaaagaaaaagaaagaaagagagaaa-gaaagaaagaaagaaagaaag-----------------------------------------aagaaagaaaAg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 55097 127 + 80904711 -----------------aaag------aaagagaaaaaaaagaaaa----agaaagaaagaagaaag------aaaga------------aagaagagagagagaaaaagaaagaagaaag-aaaaaagaaaagaaaaggaaa-----------------------gaaaagaaaagaaaagaaaaaaaaGACAAg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56086 127 + 80997621 -----------------aaag------agagagaaaaaaaagaaaa----agaaagaaagaagaaag------aaaga------------aagaagagagagagaaaaagaaagaagaaag-aaaaaagaaaagaaaaggaaa-----------------------gaaaagaaaagaaaagaaaaaaaagacaag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66310 114 + 74645514 -----------------aaag--------agagaaaaaaaagaaaa----agaaagaaag----aag------aaaga------------aagaagagagagagaaaaagaaagaagaaag-aaaaaaggaaaggaaagaaaa-----------------------gaaaagaaaag-------aaaaaagacaag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 57444 138 + 75148670 -----------------aaagaaagagagagagaaaaaaaagaaaa----ggaaagaaagaagaaagaaagaaaaaga------------aagaaagaagagagagagagaaagaagaaagaaaaaaagaaaaggaaagaaaa-----------------------gaaaagaaaagaaaag--aaaaaagacaag i chlSab2.chr16 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I e calJac3.chrUn_GL286409 872668 0 - 1291538 C e nomLeu3.chr19 82124 0 - 81552678 C a score=198635.000000 s hg38.chr17_GL383563v3_alt 129521 96 + 375691 accaagtacagtgactcacacctgtaatcccagcactttgggaggccaaagtgggaggattgcttgaggccagggattcgagaccagcctgggcat s panTro4.chr17 127706 96 + 82630442 accaagtacagtgactcacacctgtaatcccagcactttgggaggccaaagtgggaggatcgcttgaggccagggattcgagaccagcctgggcaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25596 95 + 73212453 accaagtacagtgactcacacctgtaatcccagcactttgggaagccgaagtggga-gatcgcttgaggccagggattcgagaccagcctgggcaa i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 55224 88 + 80904711 accaagtacagtggctgacacctgtaatcccagcactttgggaagccgaggtgggag--------gaggccaggaattcgagaccagcctgggcaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56213 88 + 80997621 accaagtacagtggctcacacctgtaatcccagcactttgggaagccgaggtgggag--------gaggccaggaattcgagaccagcctgggcaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66424 88 + 74645514 accaagtacagtggctcacacctgtaatcccagcactttgggaagccgaggtgggag--------gaggccaggaattcgagaccagcctgggcaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 57582 87 + 75148670 accaagtacagcggctcacacctgtaatcccagcaattt-ggaagccgaagtgggag--------gaggccaggaattcaagaccagcctgggcaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 872668 95 - 1291538 accaagtacagtggctcacgcctataatcccagcacactgggaagccgaagtgggaggatcacttgaggccaggagttcaagaccag-ctgggcaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I e nomLeu3.chr19 82124 0 - 81552678 C a score=531867.000000 s hg38.chr17_GL383563v3_alt 129617 230 + 375691 cacagtgagaccccatcactacaaaaaat-aaaaaaaaaag----gagtggggtatggtagcatgcacccatagtcccagctactcaggaggagtggggaggatcccttgaactagggagatcgagactgcagtgagccattactgcaccattgtataccagcctgggtgacagagcaagaccccatctcaaaaaaaaaaaaaaaaaaggaaaagaaaa---------GAAAAGaaaaatggtt s panTro4.chr17 127802 227 + 82630442 cacagtgagaccccatcactacaaaaaat--aaaaaaaaag----gagtggggtgtggtagcatgcacccctagtcccagctactcaggaggagtggggaggatcccttgaactagggagatcgagactgcagtgagccattactgcaccattgtataccagcctgggtgacagagcaagaccccatctc--aaaaaaaaaaaaaaaaggaaaagaaaa---------gaaAAGaaaaatggtt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25691 209 + 73212453 cacagtgagaccccatcactacaaaaaat-ttaaaaaaaag----cagtggggtaaggtagcatgcacccgtagtcccagctactcgggaggagcggggaggatcccttgaactagggcgatcgaggctgcag-----------------agtgtataccagcctgggtgacagaggaagaccctatctc----aaaaaaaaaaaaaaggaaaagaaaa---------gaaaaGaaaaatggtt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82124 213 - 81552678 cacggtgagacGccatcactacgaagaat----taaacaag----cagtggggtgtggtagcat-cacccgcagtcccagctactcgggagga--ggggagggt-ccttgaactggggagatcgaggctgcag--agccactattgcaccattgtataccagcctgggtgacagagcaagaccctatctc--------aaaaaataaaaaaaaggaaaa---------gaaaagaaaaatggtt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 55312 224 + 80904711 cacggtgagactccatcactacaaaacatttatttaaaaag----tagtggggtgtggtagcttgtacccgtagtcccagctactcgggaggaagtgggaggatcccttgaaccagggagattgaggctgcatcgagccattattgcaccatcgtataccagcctgggtgacagagcaaggccctacttc-------aaaaaaaaaaaaagaaagaaag---------gaaaagaaAAATGGTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56301 226 + 80997621 cacggtgagactccatcactacaaaacatttttttaaaaag----tagtggggtgtggtagcttgtacccgtagtcccagctactcgggaggaagtgggaggatcccttgaaccagggagattgaggctgcatcgagccattattgcaccatcgtataccagcctgggtgacagagcaagaccctatttc-----aaaaaaaaaaaaaaagaaagaaag---------gaaaagaaaaatggtt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66512 222 + 74645514 cacagtgagactccatcactacaaaacatttttttaaaaag----tggtggggtgtggtagcatgtacccgtagtcccagctactcgggaggaagtgggaggatcccttgaaccagggagattgAGGCAGCATCGAGCCATTATTGCACCATCgtataccagcctgggtgacagagcaagaccctatctc---------aagaaaaaagagaaagaaag---------gaaaagaaaaatggtt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 57669 235 + 75148670 cacagtgagactccatcactacaaaacattttttaaaaaag----tagtggggtgtggtagcgtgtacccgtagtcccagctactcgggaggaagtgggaggatcccttgaaccagggagattgaggctgcattgagccattattgcaccatcgtataccagcctgggtgacagagcaaaatcctttctc-----aaaaaaaaaaaaaaaaaaagaaagaaaggaaaagaaaagaaaAATGGTT i chlSab2.chr16 C 0 I 6547 s calJac3.chrUn_GL286409 872763 202 - 1291538 cacagtgagaccacatcactacaaaaagg-----aaaaaagatcttagcggggtatggtagcatgcacccgcagtcccagctactcaggaggaggcgggaggatcccttaaaccagggagactgaagctgcagtaagccatcagtgtgccactgtataccagcctgggtgacagagcaagactctatatc----------------------------a---------aaaaaaaaagatgatt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I a score=229696.000000 s hg38.chr17_GL383563v3_alt 129847 90 + 375691 ggaatggtattatatcttaggttatatctattttaccacactaaaaaaAGCAGA-TAAAAATAAGCTCACAATAAACAAATTTAAATTGCA s panTro4.chr17 128029 90 + 82630442 ggaatggtattatatcttaggttatgtctattttaccacactaaaaaaAGCAGA-TAAAAATAAGCTCACAATAAACAAATTTAAATTGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25900 87 + 73212453 ggaatgg---tatatcttaggttatgtctattttaccacactaaaaaaAGCAGG-TAAAAATAAGCTCACAATAAACAAATTTAAATTGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82337 87 - 81552678 ggaatgg---tgtatcttgggttatatctattttaccacactaaaaaaAGCAGG-TAAAAATAAGTTCACAATAAATAAATTTTAATCGCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 55536 85 + 80904711 AGAATGA---TATATATTAGGTTATGTC--TTTTACCACAATAAAAAGAGCAGG-AGAAAATAAGCTCACAATAAACAAATTTTAATTGCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56527 85 + 80997621 agaatga---tatatattaggttatgtc--ttttaccacaataaaaagagcagg-aaaaaataagctcacaataAACAAATTTTAATTGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66734 85 + 74645514 agAATGA---TATATCTTAGGTTATGTC--TTTTACCACGATAAAAAGAGCAGG-AAAAAATAAGCTcacaataaacaaattttaattgcA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 64451 85 + 75148670 AGATTGA---TATATCTTAGGTTATGTC--TTTTACCACAATAAAAAGAGCAGG-AAAAAATAAGCTCACAATAAACAAATTTTAATTGCA i chlSab2.chr16 I 6547 C 0 s calJac3.chrUn_GL286409 872965 87 - 1291538 ggaatgg---tatatcttaggttatgtct-ttttaccacaataaaaaGAGCAGGAAAAAAATAAGCTCACAATAAAAAAATTTTAATTGCA i calJac3.chrUn_GL286409 C 0 I 728 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I a score=2800.000000 s hg38.chr17_GL383563v3_alt 129937 1 + 375691 C s panTro4.chr17 128119 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25987 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82424 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 55621 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56612 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66819 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 64536 1 + 75148670 C i chlSab2.chr16 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I e calJac3.chrUn_GL286409 873052 728 - 1291538 I a score=6519.000000 s hg38.chr17_GL383563v3_alt 129938 5 + 375691 -CGAGG s panTro4.chr17 128120 5 + 82630442 -CGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25988 4 + 73212453 -CG-GG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82425 4 - 81552678 -CG-GG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 55622 4 + 80904711 -CG-GG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56613 4 + 80997621 -CG-GG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66820 4 + 74645514 -CG-GG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 64537 4 + 75148670 -CG-GG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 873780 5 - 1291538 CAG-GG i calJac3.chrUn_GL286409 I 728 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15631505 1732 - 61074082 I a score=699259.000000 s hg38.chr17_GL383563v3_alt 129943 255 + 375691 GGGAGCACTTGGTCCA------TGAGCAGCTTCC-TCATGCTCCCCTGGAGAGCAACCCTGA-CCCCTCTCCCAGCCCCTAATCTGTGCATCTCTGCCTGCCTGGAACCTTCT-GGGGCTCCCAGGGTCTGGGGAACAGTTCGAAGACCACT---------------------GGGTCTAAGGAAAACCCC-AGCTGGCATTACCTTAACTTTCATCACTTATGAATCAGCTTCCCAACTGGAacctgcactattatttacttagtacttttcttt--------------------------------------------------------------------------------------------aaacagactt s panTro4.chr17 128125 255 + 82630442 GGGAGCACTTGGTCCA------TGAGCAGCTTCC-TCATGCTCCCCTGGAGAGCAACCCTGA-CCCCTCTCCCAGCCCCTAATCTGTGCATCTCTGCCTGCCTGGAACCTTCT-GGGGCTCCCAGGGTCTGGGGAACAGTTCGAAGACCACT---------------------GAGCCTAAGGAAAACCCC-AGCTGGCATTACCTTAACTTTCATCACTTATGAATCAGCTTCCCAACTGGAacctgcactattatttacttagtacttttcttt--------------------------------------------------------------------------------------------aaacagactt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 25992 255 + 73212453 GAGAGCACTTGGTCCA------TGAGCAGCTTCC-TCATGCTCCCCTGGAGAGCAACTCTGA-CCCCTCTCCCACCCCCTAGTCTGTGCATCTCTGCCTGCCTGGAACCTTCT-GGGACTCCCAGGGTCTGGGGAACAGTTCGAAGACCACT---------------------GGGTCTAAGGAAAACCCC-AGCTGGCATTACCTTAACTTTCATCACTTACGAATCAGCTTCCCAACTGGAacctgcaccattatttacttagtacttttcttt--------------------------------------------------------------------------------------------aaacagactt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82429 255 - 81552678 GAGAGCACTTGTTCCA------TGAGCAGCTTCC-TCATGCCCCCCTGGAGAGCAGCCCTGA--CCCTCTCCCACCCCCTGGTCTGGGCATCTCTGCCTGCCTGGAACCTTCTGGGGGCTCCCAGGGTCTGGGGAACAGTTCAAACACCACT---------------------GGGTCTAAGGAAAACCCC-AGCTGGCATTACCTTAACTTTCATCACTTATGAATCAGCTTCCCAGCTGGAacctgcactattatttacttagtacttttcttt--------------------------------------------------------------------------------------------aaacagactt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 55626 259 + 80904711 GGGAGCACTTGGTCCACAGGGGTGAGCAGCTTCC-TCACGCTCCCT-GGAGAGCAACCCTAA--CCCTCTCCCAGCCCCTAGTCTGTGCATCTCTGCCTGCCTGGAACCCTCT-GGGGCTCCCAGGGTCTGCGGAACAGTTCGAAGACTATT---------------------GGGTCCAAGGAAATTCCG-AGCTGGCACGACCTTCACTTTCATCACTTAAAAACCAGCTTCCCACCTGGAacctgcacgattatttacttagtacgtttcttt--------------------------------------------------------------------------------------------aaacagactt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56617 259 + 80997621 GGGAGCACTTGGTCCACAGGGGTGAGCAGCTTCC-TCACGCTCCCT-GGAGAGCAACCCTAA--CCCTCTCCCAGCCCCTAGTCTGTGCATCTCTGCCTGCCTGGAACCCTCT-GGGGCTCCCAGGGTCTGCGGAACAGTTCGAAGACTATT---------------------GGGTCCAAGGAAATTCCG-AGCTGGCACGACCTTCACTTTCATCACTTAAAAACCAGCTTCCCACCTGGAacctgcacgattatttacttagtacgtttcttt--------------------------------------------------------------------------------------------aaacagactt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 66824 255 + 74645514 GGGAGCGCTTAGTCCACAGGGGTGAGCAGCTTCT-TCACGCTCCCC-AGAGAGCAACCCTAA--CCCTCTCCCAGCCCCTAGTCTGTGCATCT----CTGCCTGGAACCCTCT-GGAGCTCCCAGGGTCTGCGGAACAGTTCGAAGACTATT---------------------GGGTCCAAGGAAATTCCC-AGCTGGCATGACCTTCACTTTCATCACTTACACACCAACTTCCCACCTGGAACCTGCACTATTATTTACTTAGTACTTTTCTTT--------------------------------------------------------------------------------------------AAACAGACTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 64541 259 + 75148670 GGGAGCGCTTAGCCCACAGGGGTGAGCAGCTTCC-TCACGCTCCCC-GGAGAGCAACCCTAA--CCCTCTCCCAGCCCCTAGTCTGTGTATCTCTGCCTGCCTGGAACCCTCT-GGGGCTCCCAGGGTCTGCAGAACAGTTCGAAGACTATT---------------------GGGTCCAAGGAAATTCCG-AGCTGGCATGACCTTCACTTTCATCACTTACAAATCAGCTTCCCACCTGGAacctgcgttattatttacttagtacttttcttt--------------------------------------------------------------------------------------------aaacagactt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 873785 228 - 1291538 GGAAGCACTTGGTCCTCAGGGGTGAG------------------------GAGCAACCCTGC-CCCCTCTCCC--------GCCTGTTC-CCTAGGCCTGCCCCGAACCCTCT-GGGGCTCCCAGGGCTTAGGAAACAGTTCAAAGACCATT---------------------AGCTCCAAGGAAAACCCC-AGCTGGCATT-CCTTCACTTTCATTACTTATGAATCAGCTTCCCAACTGGAacctgcgctactatttacttagtacttctcttt--------------------------------------------------------------------------------------------aaacggactc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15633237 365 - 61074082 GGGAGTGCCTGGCTCACAGTCCAGAGGTGCTTCCTTCATGGCCCTC-----TGCTGCTATGGACCACTCTGTCACCCAATAGGCCATGCATCTCCACCTGCCCAGG--CTTCT-GGGG-TCCCAAGGTCTGAAGAACAGTTTGAAAACCATTACCCCTGTGAAACCCCAAAGCGGAGCTAAGCAGGCCCTGAAACTGGCATT-CCTCAGGCTCTGTTGCTTATGAGCCAGCTTCTCAACTGAGACCTGC---attatttactttatagttttctttacaaatcaacttgttttattttttttttaaagatcttatttatttattcatgagggacacagagagagaggcagagacataggcataaggagaagcaggctt i canFam3.chr9 I 1732 I 103 e mm10.chr11 75804575 2598 + 122082543 I a score=761460.000000 s hg38.chr17_GL383563v3_alt 130198 241 + 375691 acttaaaaatcccttaaatacccaggttagctttgtcctaacaataatatcaatgatgggaattgatgtgctgattacgtctctctatggcacattgaaataaacatataattattacagtaaaaTAGGGTGTGTTACGtcagtaagggttaagcaaatggccaaggtctca-taactagaaagaagcagaggctggccctgaggcttggcagaccggctccagaattgacacccttgacca s panTro4.chr17 128380 241 + 82630442 acttaaaaatcccttaagtacccaggttagctttgtcctaacaataatatcaatgatgggaattgatgtgctgattacgtctctctatggcacattgaaataaacatataattattagagtaaaaTAGGGTGTGTTACGtcagtgagggttaagcaaatggccaaggtctca-tcactagaaagaagcagaggctggccctgaggcttggcagtccggctccagaattgacacccttgacca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 26247 239 + 73212453 acttaaaaatcccttaaatacccaggttagctttgtcctaacaataatatctatgatgggaattgatgtgctgattatgtctctctatggcacattgaaataaacatataattattacagtaaaaTAGGGTGTGTtgagtcagtgagggttaagcaaatggccaagttctca-taaccagaaagaagc--aggctggccctgaggcttgacagtctggctccagaattgacacccttgacca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82684 239 - 81552678 acttaaaaatcccttaaacgcccaggttagctttgtcctaacagtaatatctatgatgggaattgatgtgctgattatgtctctctatggaacattgaaataagcacataattattacagtaaaaTAGGGTGTGctaagtcagtgaaggttaagcaaatggccaagttctca-taactagaaagaggc--cggctggccctgaggcttcgcaatctggctccagaattgacacccttgacca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 55885 238 + 80904711 acttaaaaatcccttaaatacccaggttagctttgtcctaacaataatatctacgatgggaattgatgtgctgattgcgtctctcgatggcacattgaaataaatacataattattacagtagaaTAGGCTGTGTtaagtcactgagggttaagcaaacggccaaggtctca-taaccagaaagaggc--aggctgg-cctgaggcttggcagtccggctccagaagtgacacccctgacca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 56876 238 + 80997621 acttaaaaatcccttaaatacccaggttagctttgtcctaacaataatatctacgatgggaattgatgtgctgattgcgtctctcgatggcacattgaaataaatacataattattacagtagaaTAGGCTGTGTtaagtcactgagggttaagcaaacggccaaggtctca-taaccagaaagaggc--aggctgg-cctgaggcttggcagtccggctccagaagtgacacccttgacca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 67079 237 + 74645514 ACTTAAAAATCCCTTAAATACCCAGGTTAGCTTTGTCCTAACAATAATATCTACGATGGGAATTGATGTGCTGATTGCGTCTCTCGATGGCacattgaaataaatacataattattacaGTGGAATAGGCTGTGTTAAGTCACTGAGGGTTAAGCAAACGGCCAAGGTCTCA-TAACCAGAAAGAGGC--AGGCTGG-CCTGAGGCTTGGCAGTCCGGCTCCAGAAGTGACA-CTTTGACCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 64800 238 + 75148670 acttaaaaatcccgtaaatacccaggttagctttgtcctaacaataatatctacgatgggaattgatgtgctgattgcatctcttgatggcacattgaaataaatacataattattacagtagaaTAGGCTGTGTtaagtcactgagggttaaccaaacggccaagctctca-taaccagaaagaggc--aggctgg-cctgaggcttggcagtccggctccagaagtgacacccttgacca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 874013 233 - 1291538 actttaaaatctcttaaatacccaggttagctttgtcctaacaataatatctgtgatgggaattgatatgctgatcatgtgtctctatggcacattgaagtaa--acataattattacagtaaaaTGGGTGGTGctgagtcagtgagggttaagtaaatggctgaggtctcg-tagctaggaagaggc--aggcctgcactgaggctt----gtctggctccagaattgacacctttgaccg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15633705 242 - 61074082 ccttaaagctgctttaaatatccagcttagctttgtcctaacaatagcacctgtgacagaaatcgatgtgtcagttatatttctctaccgcacactgacataaacatgtagttattacaatgaaatattttTCATTAAGTACATgagggtgagtcagttgcccaaggtctcaccaactgaaatgagacagaagccacatttgagcccaggcagtttggctccagaatctgtgctcttaacca i canFam3.chr9 I 103 C 0 e mm10.chr11 75804575 2598 + 122082543 I a score=109126.000000 s hg38.chr17_GL383563v3_alt 130439 36 + 375691 ctgtcacctacccctGGCCTGTGACAGTTACCTGTT s panTro4.chr17 128621 36 + 82630442 ctgtcacctacccctGGCCTGTGACAGTTACCTGTT i panTro4.chr17 C 0 I 5 s ponAbe2.chr17 26486 36 + 73212453 ctgtCACCTACCCCTGGCCTGTGACAGTTACCTGTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82923 36 - 81552678 ctGCCACCTACCCCCAGCCTGTGACAGTTACCTGTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 56123 36 + 80904711 ctGCCACCTGCCCCTGGCCTGTGACAGTCACCTGTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 57114 36 + 80997621 ctgccacctgcccctGGCCTGTGACAGTCACCTGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 67316 36 + 74645514 TTGCCACCTGCCCCTGGCCTGTGACAGTCGCCTGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 65038 36 + 75148670 ttGCCACCTGCCCCTGGCCTGTGACAGTCACCTGTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 874246 36 - 1291538 ttgccacttacccctGGCCTATGGCAGTTACCTGTT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C a score=1476.000000 s hg38.chr17_GL383563v3_alt 130475 2 + 375691 CC s ponAbe2.chr17 26522 2 + 73212453 CC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 82959 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 67352 2 + 74645514 CC i papAnu2.chr16 C 0 I 3 s calJac3.chrUn_GL286409 874282 2 - 1291538 CT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e chlSab2.chr16 65074 0 + 75148670 C e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e panTro4.chr17 128657 5 + 82630442 I a score=807.000000 s hg38.chr17_GL383563v3_alt 130477 2 + 375691 CC s ponAbe2.chr17 26524 2 + 73212453 CC i ponAbe2.chr17 C 0 I 1 s nomLeu3.chr19 82961 2 - 81552678 CC i nomLeu3.chr19 C 0 I 83 s calJac3.chrUn_GL286409 874284 2 - 1291538 CT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e panTro4.chr17 128657 5 + 82630442 I a score=9023.000000 s hg38.chr17_GL383563v3_alt 130479 12 + 375691 GCCCCCACGACA s panTro4.chr17 128662 12 + 82630442 GCCCCCGTGACA i panTro4.chr17 I 5 C 0 s ponAbe2.chr17 26527 12 + 73212453 GCCCCCATGACA i ponAbe2.chr17 I 1 C 0 s nomLeu3.chr19 83046 12 - 81552678 GCCCTCGTGACA i nomLeu3.chr19 I 83 C 0 s calJac3.chrUn_GL286409 874286 12 - 1291538 GCCCCGGTGACA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C a score=3687.000000 s hg38.chr17_GL383563v3_alt 130491 10 + 375691 GTCACCCGTT s panTro4.chr17 128674 10 + 82630442 GTTTCCTGTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 26539 10 + 73212453 GGTACCTGTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 83058 10 - 81552678 GTTACCTGTT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C a score=8871.000000 s hg38.chr17_GL383563v3_alt 130501 38 + 375691 CCCCCGTCCCCACGACAGTCGCCCGTTCCCCCGCCCCC s panTro4.chr17 128684 38 + 82630442 CCCCTGCCCCCGCGACAGTCACCTGTTCCCCTGCCCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 83068 38 - 81552678 CCCCTGCCCCCATAACAGTTACCTGTTCCCCCGCCCCC i nomLeu3.chr19 C 0 I 720 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e ponAbe2.chr17 26549 0 + 73212453 C a score=23618.000000 s hg38.chr17_GL383563v3_alt 130539 124 + 375691 GCGACAGTCACCCGTTCCCCCGGCCCCTCGACAGTCACCCGTTCCCCCGGCCCCGCGACAGTCGCCCGTTCCCCCGGCCCCGCGACAGTCGCCCGTTCCCCCGGCCCCGCGAC-AGTCACCCGTT s panTro4.chr17 128722 123 + 82630442 GCGACAGTCACCTGTTCCCCTG--CCCCCGACAGTCACCTGTTCCGCTGCCCCTGTGACAGTCACCTGTTCCCCTGCCCCCATGACAGTCACCTGTTCCCCTGCCCCCGTGACAAGTTACCTGTT i panTro4.chr17 C 0 T 188 s nomLeu3.chr19 83826 121 - 81552678 GTGACAGTTACCTGTTCCCCTG-CCCCCTGACAGTTACCTGTTCCCCTG-CCCCGTGACAGTTACCTGTTCCCCTG-CCCCGTGACAGTTACCTGTTCCCCCGCCCCCGTGAC-AGTTACCTATT i nomLeu3.chr19 I 720 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e ponAbe2.chr17 26549 0 + 73212453 C a score=100.000000 s hg38.chr17_GL383563v3_alt 130663 1 + 375691 C s nomLeu3.chr19 83947 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e ponAbe2.chr17 26549 0 + 73212453 C e panTro4.chr17 128845 188 + 82630442 T a score=28452.000000 s hg38.chr17_GL383563v3_alt 130664 142 + 375691 CCCCCGCCCCCGCGACAGTCTCCCGTTCCCCCGCCCCCGCGACAGTCACCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCACCCGTTCCCCCCGCCCCCGCGACAGTCACCCGTTCCCCCC- s panTro4.chr17 128657 138 + 82630442 CCCCTGCCCCCGTGACAGTTTCCTGTTCCCCTGCCCCCGCGACAGTCACCTGTTCCCCTGCCCCCGCGACAGTCACCTGTTCCCCTGCCCC--CGACAGTCACCTGTT-CCGCTGCCCCTGTGACAGTCACCTGTT-CCCCT- i panTro4.chr17 T 188 C 0 s nomLeu3.chr19 83948 140 - 81552678 -CCCCGCCCCCGTGACAGTTACCTGTTCCCCTGCCCCGGTGACAGTTACCTGTTCCCCTGCCCCCCTGACAGTTACCTGTTCCCCTGCCCCCCTGACAGTTACCTGTT-CCCCTGCCCCCCTGACAGTTACCTGTT-CCCCTG i nomLeu3.chr19 C 0 I 997 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e ponAbe2.chr17 26549 0 + 73212453 C a score=26088.000000 s hg38.chr17_GL383563v3_alt 130806 124 + 375691 GCCCCCGCGACAGTCACCCGTTCCCCCGCCCCCGCGAC-AGTCTCCCGTTCCCCCGCCCCCGCGACAGTCACCCGTTCCCCCGGCCCCGCGACAGTCACCCGTTCCCCCGCCCCCGCGAC-AGTCG s panTro4.chr17 128795 126 + 82630442 GCCCCCATGACAGTCACCTGTTCCCCTGCCCCCGTGACAAGTTACCTGTTCCCCTGCCCCCGCGACAGTCACCTGTTCCCCTGCCCCCGTGACAGTCACCTGTTCCCCTGCCCCCGTAACAAGTTA i panTro4.chr17 C 0 T 164 s nomLeu3.chr19 85085 122 - 81552678 GCCCCCGTGACAGTTACCTATTCCCCCGCCCCCGTGAC-AGTTACCTGTTCCCCTGCCCCCGTGACAGTTACCTGTTCCCCTG-CCCCGTGACAGTTACCTGTTCCCCTG-CCCCGTGAC-AGTTA i nomLeu3.chr19 I 997 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e ponAbe2.chr17 26549 0 + 73212453 C a score=14816.000000 s hg38.chr17_GL383563v3_alt 130930 88 + 375691 CCCGTTCCCCCGGCCCCGCGACAGTCGCCCGTTCCCCCGCCCCCGCGACAGTCTCCCGTTCCCCCGCCCCCGCGACAGTCTCCCGTTC s panTro4.chr17 128757 88 + 82630442 CCTGTTCCGCTGCCCCTGTGACAGTCACCTGTTCCCCTGCCCCCATGACAGTCACCTGTTCCCCTGCCCCCGTGACAAGTTACCTGTT i panTro4.chr17 T 164 C 0 s nomLeu3.chr19 85207 85 - 81552678 CCTGTTCCCCTG-CCCCGTGACAGTTACCTGTTCCCCTGCCCCC-TGACAGTTACCTGTTCCCCTG-CCCCGTGACAGTTACCTGTTC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C e ponAbe2.chr17 26549 0 + 73212453 C a score=28491.000000 s hg38.chr17_GL383563v3_alt 131018 70 + 375691 CCCCCGCCCCCGCGACAGTCTCCCGTTCCCCCGCCCCCGCGACAGTCACCCGTTCCCCCGGCTCCGCGAC s panTro4.chr17 128845 70 + 82630442 CCCCTGCCCCCGCGACAGTCACCTGTTCCCCTGCCCCCGTGACAGTCACCTGTTCCCCTGCCCCCGTAAC i panTro4.chr17 C 0 T 269 s ponAbe2.chr17 26549 70 + 73212453 CCCCTGCCCCCGTGACAGGTACCTGTTCCCCTGCCCCCGTGACAGGTACCTGTTCCCCTGCCCCCGTGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 85292 66 - 81552678 -CCCTGCCCCC-TGACAGTTACCTGTTCCCCTG-CCCCGTGACAGTTACCTGTTCCCCTG-CCCCGTGAC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C a score=37952.000000 s hg38.chr17_GL383563v3_alt 131088 86 + 375691 AGTCACCCGTTCCCCCGCCCCCGCGACAGTCTCCCGTTCCCCCGGCCCCGCGACAGTCACCCGTTCCCCCGCCCCCGCGACAGTCT s panTro4.chr17 128646 86 + 82630442 AGTTACCTGTTCCCCTGCCCCCGTGACAGTTTCCTGTTCCCCTGCCCCCGCGACAGTCACCTGTTCCCCTGCCCCCGCGACAGTCA i panTro4.chr17 T 269 I 189 s ponAbe2.chr17 26619 86 + 73212453 AGGTACCTGTTCCCCTGCCCCCGTGACAGGTACCTGTTCCCCTGCCCCCGTGACAGGTACCTGTTCCCCTGGCCCCGTGACAGGTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 85358 86 - 81552678 AGTTACCTGTTCCCCCGCCCCCGTGACAGTTACCTATTCCCCCGCCCCCGTGACAGTTACCTGTTCCCCTGCCCCGGTGACAGTTA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C a score=59571.000000 s hg38.chr17_GL383563v3_alt 131174 140 + 375691 CCCGTTCCCCCGCCCCCGCGACA-GTCGCCCGTTCCCCCGCCCCCGCGACAGTCGCCCGTTCCCCCGGCCCCGCGACAGTCGCCCGTTCCCCCGGCCCCGCGACAGTCGCCCGTTCCCCCGGCCCCGCGACAGTCACCCGT s panTro4.chr17 128921 141 + 82630442 CCTGTTCCCCTGCCCCCGTGACAAGTTACCTGTTCCCCTGCCCCCGTGACAGTTACCTGTTCCCCTGCCCCCGTGACAGTTACCTGTTCCCCTGCCCCCGTCACAGTTACCTGTTCCCCTGCCCCCGTCACAGTTACCTGT i panTro4.chr17 I 189 C 0 s ponAbe2.chr17 26705 140 + 73212453 CCTGTTCCCCTGCCCCCGTGACA-GGTACCTGTTCCCCTGCCCCCGTGACAGGTACCTGTTCCCCTGGCCCCGTGACAGCTACCTGTTCCCCTGCCCCCGTGACAGGTACCTGTTCCCCTGCCCCCGTGACAGGTACCTGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 85444 138 - 81552678 CCTGTTCCCCTGCCCCCCTGACA-GTTACCTGTTCCCCTGCCCCCCTGACAGTTACCTGTTCCCCTGCCCCCCTGACAGTTACCTGTTCCCCTG-CCCCGTGACAGTTACCTGTTCCCCTG-CCCCGTGACAGTTACCTGT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e canFam3.chr9 15633947 0 - 61074082 C e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C a score=22541.000000 s hg38.chr17_GL383563v3_alt 131314 53 + 375691 TCCCCCGCCCCG-CGACAGTCACCCGTTCCCCCGCCC---CCGCGACAGTTACCTG-T- s panTro4.chr17 129062 54 + 82630442 TCCCCGGCCCCGGTGACAGTTACCTGTTCCCCTGCCC---CTGTGACAGTTACCTG-T- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 26845 55 + 73212453 TCCCCTGCCCCCGTGACAGGTACCTGTTCCCCTGCCC---CCGTGACAGGTACCTGTT- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 85582 54 - 81552678 TCCCCCGCCCCCCTGACAGTTATCTGTTCCCCTGCCC---CTGTGACAGTTACCTG-T- i nomLeu3.chr19 C 0 I 1934 s canFam3.chr9 15633947 53 - 61074082 TCCCCTGTCCCGAT----GTGTTCAGCCCCATCACCCTGGCTGTGACAGCGA-CTG-TC i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e calJac3.chrUn_GL286409 874298 0 - 1291538 C e chlSab2.chr16 65074 0 + 75148670 C e papAnu2.chr16 67354 3 + 74645514 I e rheMac3.chr16 56159 0 + 80904711 C e macFas5.chr16 57150 0 + 80997621 C a score=25928.000000 s hg38.chr17_GL383563v3_alt 131367 13 + 375691 CCCCTGCCCCCAT s panTro4.chr17 129116 13 + 82630442 CCCCTGCCCCCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 26900 13 + 73212453 CCCCTGCCCCCGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 87570 13 - 81552678 CCCCTGCCCCCAT i nomLeu3.chr19 I 1934 C 0 s rheMac3.chr16 56159 13 + 80904711 CCCCTGCCCCCGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 57150 13 + 80997621 CCCCTGCCCCCGG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 65074 13 + 75148670 CCCCTGCCCCCGG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15634000 13 - 61074082 CCCCAACTTCCAC i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e calJac3.chrUn_GL286409 874298 0 - 1291538 C e papAnu2.chr16 67354 3 + 74645514 I a score=5262.000000 s hg38.chr17_GL383563v3_alt 131380 4 + 375691 -GAAG s panTro4.chr17 129129 4 + 82630442 -GAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 26913 4 + 73212453 -GAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 87583 4 - 81552678 -GAAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 56172 4 + 80904711 -GACG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 57163 4 + 80997621 -GACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 67357 4 + 74645514 -GACG i papAnu2.chr16 I 3 C 0 s chlSab2.chr16 65087 4 + 75148670 -GACG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15634013 4 - 61074082 GGAC- i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e calJac3.chrUn_GL286409 874298 0 - 1291538 C a score=1180112.000000 s hg38.chr17_GL383563v3_alt 131384 395 + 375691 -GGGCATGCTTGCCCAACATGTTAAGGCTGCAGGTGGCAGAGCATAGTTCTTTGTGGGTGAGGAGGGAGGGC--GAGCTGAGCTGAGCTTTGCTTACCATCCTCGGTGGCACCTGCCAGGGCTGGGCCAGTCCTCCGTTCCCTTGAACCCACAGGACAATGACCCAGGGGTCCCGGACTCTCTACAAGGCCTGGCCTTCAGGCTCATGCCCAGCCTTCCTCAGAGGGCTGGGGGTCTGC--------ATCAGGTTAACCACACGGCAGCCCCCACCTCTGCAGCCCCACC--------CGCTGTCTCCCTGACCCCTCTTCTGCCCTAAGGCAAGAGCAGGAGGCACTGCGTtggcctcagtcctgagacctcaaggctgagaaaaggttagcccagcaaagagctgcaggaag- s panTro4.chr17 129133 395 + 82630442 -GGGCATGCTTGCCCAACATGTTAAGGCTGCAGGTGGCAGAGCATAGTTCTTTGTGGGTGAGGAGGGAGGGC--GAGCTGAGCTGAGCTTTGCTTACCATCCTCGGTGGCACCTGCCAGTGCTGGGCCAGTCCTCTGTTCCCTTGAACCCACAGGACAATGACCCAGGGGTCCCGGACTCTCTACAAGGCCTGGCCTTCAGGCTCATGCCCAGCCTTCCTCAGAGGGCTGGGGGTCTGC--------ATCAGGTTAACCACACGGCAGCCCCCACCTCTGCAGCCCCACC--------CGCTGTCTCCCTGACCCCTCTTCTGCCCTAAGGCAAGAGCAGGAGGCATTGCATtggcctcagtcctgagacctcaaggctgagaaaaggttagcccagcaaagagctgcaggaag- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 26917 393 + 73212453 -GGGCATGCTTGCCCAACATGTTAAGGCTGCAGGTGGCAGAGCATAGTTCTTTGTGGGTGAGTAGGGAGGGC--GAGCTGAGCTGAGCTTTGCTTACCATCCTTGGTGGCACCTGCCAGTGCTGGGCCAGTCCTCCGCTCCCTTGAACCCACAGGACAATGATCCAGGGGTCCCGGACTCCCTACAAGGCCTGGCCTTCAGGCTCATGCCCAGCCTTCCTCAGAGGGCTGGGGGTCTGC--------ATCAGGGTGACCACACGGCAGCCCCTGCCTCTGCAGCCCCACC--------CGCTGTCTCCCTAACCCCTCTTCTGCCCTAAGGCAAGAGCAAGAAGCACTGTGTTGGCCTCAGTCCTGGAACCTCAAGGCTGAGAAAAGGTTAGCCCA--CAAGAGCTGCAGGAAG- i ponAbe2.chr17 C 0 I 20 s nomLeu3.chr19 87587 394 - 81552678 -GGGCATGCTTGCCCAACATGTTAAGGCTGCAGGTGGCAGAGCATCGTTCTTTGTGGGTGAGTAGGGAGGGT--GAGCTGAGCTGAGCTTTGCTTACCATCCTCGGTGGCACCTGCCAGTGCTGGGCCGGTCCTCTGCT-CCTTGAACCCACAGGACAATGATCCAGGGGTCCCGGACTCCCTACAAGGCCTGGCCTTCAGGCTCATGCCCAGCCTTCCTCAGAGGGCAGGGGGTCTGC--------ATCAGGTTAACCACCCGGCAGCCCCTGCCTCTGCAGCCCCATC--------CGCTGTCTCCCTGACCCCTCTTCTGCCCTAAGGCAAGAGCAGGAGGCACTGTGTtggcctcagtcctgaaacctcaaggctgagaaaaggttagcccagcaaagagctgcaggaag- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 56176 394 + 80904711 -GGACATGCTTG-CCAACGTGTTAAGGCTGTAGGGGGCAGAGCATAGTTCTTCACTGGTGAGTAGGGAGGGC--GAGCTGAGCTGAGCTTTGTTTACCATCCTCGGTGGCACCTGCCAGTGCTAGGCCAGTCCTCTGCTCCCTCAAACCCACAGGACAATGACCCAGGGGTCCCAGACTCCCTACAAGGCCTGGCCTTCAGGCTCACGTCCAGCCTTCCTCAGAGGGCTGGGGGTCTGC--------ATCAGGTTAACCACATGGCAGCCCCTGCCTCTGCAGCCCCACC--------TGCTGCCTCCCTCATCTCTCTTCTGCCCTGAGGCAGGAGCTAGAGGCACCGTGTtggcctcagccctgaaacctgaaggctgagaaaaggtccgcccagcaaagagccgcaggaag- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 57167 393 + 80997621 -GGACATGCTTG-CCAACGTGTTAAGGCTGTA-GGGGCAGAGCATAGTTCTTCACTGGTGAGTAGGGAGGGC--GAGCTGAGCTGAGCTTTGTTTACCATCCTCGGTGGCACCTGCCAGTGCTAGGCCAGTCCTCTGCTCCCTCAAACCCACAGGACAATGACCCAGGGGTCCCAGACTCCCTACAAGGCCTGGCCTTCAGGCTCACGTCCAGCCTTCCTCAGAGGGCTGGGGGTCTGC--------ATCAGGTTAACCACATGGCAGCCCCTGCCTCTGCAGCCCCACC--------TGCTGCCTCCCTCATCTCTCTTCTGCCCTGAGGCAGGAGCTAGAGGCACCGTGTtggcctcagccctgaaacctgaaggctgagaaaaggtccgcccagcaaagagccgcaggaag- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 67361 394 + 74645514 -GGACATGCTTG-CCAACATGTTAAGGCTGTAGGGGGCAGAGCATAGTTCTTCCCTGGTAAGTAGGGAGGCC--GAGCTGAGCTGAGCTTTGTTTACCATCCTCGGTGGCACCTGCCAGTGCTAGGCCAGTCCTCTGCTCCCTCAAACCCACAGGACAATGACCCAGGGGTCCCAGACTCCCTACAAGGCCTGGCCTTCAGGCTCACGCCCAGCCTTCCTCAGAGGGCCGGGGGTCTGC--------ATCAGGTTAACCACATGGCAGCCCCTGCCTCTGCAGCCCCACC--------TGCTGCCTCCCTCATCTCTCTTCTgccctgaggcaggagctggAGGCACCGTGTTGGCCTCAGCCCTGAAACCTGAAGGCTGAGAAAAGGTTCGCCCAGCAAAGAGctgcaggaag- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 65091 389 + 75148670 -GGACATGCTTG-CCAACGTGTTAAGGCTGTAGGTGGCAGAGCGTAGCTCTTCGCTGGTGAGTAGGGAGAGC--G----GAGCTGAGTTTCATTTACCATCCTCGGTGGCACCTGCCAGTGCTAGGCCAGTCCTCTGCTCCCTCGAACCCACAGGACAATGACCC-GGGGTCCCAGACTCCCTGCAAGGCCTGGCCTTCAGGCTCACGCCCAGCCTTCCTCAGAGGGCTGGGGGTCTGC--------ATCAAGTTAACCACATGGCAGCCCCTGCCTCTGCAGCCCCACC--------TGCTGTCTCCCTCATCTGTCTTCTGCCCTGAGGCAGGAGCTGGAGGCACTGTGTtggcctcagccctgaaacctgaaggctgagaaaaggttcgtccagcaaagagctgcaggaag- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 874298 398 - 1291538 -GGGCATGCTTGCCAAACACGTTAAGGCTTCGGGTGGCAGAGGATAGTTCTCTGCGGGTGTGTAGAGAGGGC--AAGGTAAGCTGAGCTTTGCTCACCATCCTCAGTGGCACCTGCTGGTGCTGGGCCAATCCTCTGCTCCCTCAAACTCACAGGACAATGACCTGGGGGTCCCAGACTCCCTGTAAGTCCTGGCCTTCAGGCTCATGCCCTGCCTTCCTCAGAGGGCTGGGGGTCTGT--------ATCAGGCTAACCACACAGCAGCCCCTGTCCCTGTGCCCCCCCCATGCCCATTCCTGGCTCCCTGA-CCCTCTTCTGCCCTAAGGCAAGAGCAGGAGGCACTGTGTTGGCCTCAGTCCTGAAACCTGAAGGCTGAGAAAA----AGCCCATGGAAGGGATGAAGGAAG- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15634017 333 - 61074082 AATCCAAGTTTGCCACACATATTTAAGCTGAAGATAACAGAGCACAGCTCTTTGCAAGTGTGTTAGGGGGTCTGGAGCCTGGCTGGGGTTTGCTTACTGTCCCCCACGGTGATGGTCAATCCCAGGTCAATCCCCTGCC--------TGCATGGGACAACCGTTCTGGGG-CCCAGGCTC-CTGCAGGGTA-GGCCTCAGGGCTCGCCCCCAGC--TCTTCGGAGGACCCAGGGTCGGTGTGGGGGAGTGGGGTTAGCAGCA--GCAG-CCCTGCCTCCCTTGCCCCACT--------TGCTGGGTCCCCGA--------------------------------------------------------AACCCAAGGCTGAGAACGAGTTAGCCTCGTGAAGG--CGGTGGAAGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I a score=460682.000000 s hg38.chr17_GL383563v3_alt 131779 199 + 375691 -gaggaaggggtccaggcagggggaacagcacgtgctgaggccgggcatggggaggagtgtggtgtttggggagctgcttgtggttgagcctggctggagctcttggtgtgaaggggccctacggggcagagggtggagGCCCGGTGGCTCCTATTGCATCTGTCCTGTGGCCTTGGCATGGGGTCACCCTCCTATCACA s panTro4.chr17 129528 199 + 82630442 -gaggaaggggtccaggcagggggaacagcacgtgctgaggccgggcatgggaaggagtgtggtgtttggggagctgcttgtggttgagcctggctggagctcttggtgtgaaggggccctacggggcagagggtggagGCCCGGTGGCTCCTATCGCACCTGTCCTGTGGCCTTGGCATGGGGTCACCCTCCTATCACA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 87981 199 - 81552678 -gagaaaggggtccaggcagggggaacagcaggtgctgaggccgggcacggggaggagtgtggtgtttggggagctgcttctggttgagcctggctggagctcttggtgtgaaggggccctacggggcagagggtggagGCCCAGTGGCTCCTGTTGCACCTGTCCTGCGGCCTTGGCATGTGCTCACCCTCCTATCACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 56570 199 + 80904711 -gaggaaggggtctgggcagggggaacagcacgtgctgaggccaggcatggggaggagggtggtgtttggggagctgcctgtggttgagcctggctggagctctcggtgtgaaggggccctacggggcagagggtggagGCCCAGTGGCTCCTGTCGCACCTGTCCCTTGGGCTTGGCGCCTGGTCACCCTCCTATCACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 57560 199 + 80997621 -gaggaaggggtctgggcagggggaacagcacgtgctgaggccaggcatggggaggagggtggtgtttggggagctgcctgtggttgagcctggctggagctctcggtgtgaaggggccctacggggcagagggtggagGCCCAGTGGCTCCTGTCGCACCTGTCCCTTGGGCTTGGCGCCTGGTCACCCTCCTATCACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 67755 199 + 74645514 -gaggaaggggtcTGGGCAGGGGGAACAGCACGTGCTGAGGCCGGGCATGGGGAGGAGGGTGGTGTTTGGGGAGCTGCCTGTGGTTGAGCCTGGCTGGAGCTCTCGGTGTGAAGGGGCCCTACGGGGCAGAGGGTGGAGGCCCAGTGGCTCCTGTCGCACCTGTCCCTTGGGCTTGGCGCCTGGTCACCCTCCTGTCACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 65480 199 + 75148670 -gaggaaggggtctgggcagggggaacagcaggtgctgaggccgggcatggggaggagggtggtgtttggggagctgcttgtggttgagcctggctggagctctcggtgtgaaggggccttacggggcagagggtggagGCCCAGTGGCTCCTGTTGCACCTGTCCCTTGGGCTTGGCACCTGGTCACCCTCCTATCACA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 874696 172 - 1291538 -GAGGAAGGGGTCCGGGCAGG-----------------------GGTGTGGGGAGGAGTGCAGTGTTGGGGGAGCTGCCTGTGGTGAAGCCTGGCTTCGGCTCT--GTGTGAAGGGGCCCCAT-GGGCAGAAGGTGGAGG-CCAGTGGCCCCCATGGCCGCTGTCCCTTGGGCTTGGTACATGGTCACCCTCCTGTCACA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15634350 158 - 61074082 GCGAGAAGGGGTCCTTGCAGGGGGCACAGCCCGCACTAAAGGC-CGTGTGGGAAGGTGTG-GCTGCTGGCAGAACTGTTTCTGGTTGAG-TTGGCTGGAGCGTGTGGTGTGCAGGGGCC---CAGGGGATGGGGTGGGGG----------------------------GGGGTCTGAGG--------CCCAGCTGTCACC i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e ponAbe2.chr17 27310 20 + 73212453 I a score=1391496.000000 s hg38.chr17_GL383563v3_alt 131978 513 + 375691 CTCCCCTGGAGGCTACTGATGCCGT-GGGCTCCACCAGTCTTATGGGTCAGTGCGGGGAGCCCTT--TGCTGTCTGCATTCCGAGTCAAAGACTCAGGGA---TGAAGGGTCCTTGTAACTCATTCAGTACCCCCCATCTCCCCACTCCCACCACAGCCCAGCGcccaaacacaccggtgagctccagccaccacgcccctgctcggatggctcagcctgctgggcagcctcattcacccttgaccacctggcacactcctatgctgccctcaacaccccactcaggtgttgc------ctcctcc--------------gacaagctttccacagtggtcccctggcatg-----------gccacccttgtgggcctcaccacgc--tccgtgattattgtcca--agtgtgtc----------------tccccaacggggttgaattgcttgagga----------------cCTCAATGGGGCATCACCATCTTTGTGGCCCTTGAGCTGTGGGGTCCAACTCGA-TTGCCTTGGGACCCCCTGGGAGATTCGCAGGACCCATTCCCAGGGAG-CCCAGGCTC s panTro4.chr17 129727 513 + 82630442 CTCCCCTGGAGGCTACTGATGCTGT-GGGCTCCACCAGTCTTATGGGTCAGTGCGGGGAGCCCTT--TGCTGTCTGCATTCCGAGTCAAAGACTCAGGGA---TGAAGCGTCCTTGTAACTCACTCAGTACCCCCCATCTCCCCACTCCCACCACAGCCCAGCGcccaaacacaccggtgagctccagccaccacgcccctgctcggatggctcagcctgctgggcagcctcgttcacccttgaccacctggcacactcctatgctgccctcaacaccccactcaggtgttgc------ctcctcc--------------gacgagctttccacagtggtcccctggcatg-----------gccacccttgtgggcctcaccacac--tccgtgattattgtcca--agtgtgtc----------------tccccaacggggttgaattgcttgagga----------------cctgaatggggCATCACCATCTTTGTGGCCCTTGAGCTGTGGGGTCCAACTCGA-TTGCCTTGGGACCCCCTGGGAGATTCACAGGACCCATTCCCAGGGAG-CCCAGGCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 27330 524 + 73212453 CTCCCCTGGAGGCTGCTGATGCAGTGGGGCTCCGCCTGTCTTATGGGTCAATGCAGGGAGCCCTT--TGCTGTCTGCATTCAGAGTCAAAGACTCAGGGA---TGAAGTGTCCTTATAACTCATTCAGTACCCCCCATCTCCCCACTCCCACCACAGCCCAGCGcccaaacacagcagtgagctccagccaccacgcccctgctc-gatcgctctgcctgctgggcagcctcattcacccttgaccgcctggcacacgcctatgctgccctcaacaccctactcaggtgtcgc------ttcctcc--------------aacgagctttccacaatggtcccctggcagggccacatctgtgccacccttatgggccttaccacac--ttggtgattattgttca--agtgtgtc----------------tccccaacagtgttgaatttcttgagga----------------cgtgaatggggCATCACCATCTTTGTGGCCCTTGAGCTGTGGGGTCCAACTTGA-TTGCCTTGGGACCCTCTGGGAGATTCACAGGACCCATTCCCAGGGAG-CCCAGGCTT i ponAbe2.chr17 I 20 C 0 s nomLeu3.chr19 88180 478 - 81552678 CTCCCCTGGAGGCTACTGATGCTGT-GGGCTCCACCTGTCTTAAGGGTCAGTGCCGGGAGCCCTT--TGCTGTCTGCATTCAGAGTCAAAGACTCAGGGA---TGAAGGGTCCTTATAACTCATTCAGTA---------------------------------------------CAGTGAGCtccagccaccacgcccctgctcgggtcactctgcctgctgggcagcctcattcacccttgaccacctggcacactcctatgctgccctcaacaccctactcaggtgttgc------ttcctcc--------------gacgagctttccacagtggtcccctggcatggccacatctgtgccacccttatgggccttaccacac--ttggcaattatcattca--agtgtgtc----------------tccccaacagtgttgactttcttgagga----------------cctgaatggggcatcaccatctttgtggcccTTGAGCTGTGGGGTCCAACTTGA-TTGCC-TGGGACCCTCTGGGAGATTCACAGGACCCATTCCCAGGGAG-CCCAGGCTC i nomLeu3.chr19 C 0 M 100 s rheMac3.chr16 56769 540 + 80904711 CTCCCCTGGATGCCACTGATGCTGT-GGGCTCCACCTGCCTTATGGGTCAGTGCGGGGAGCGCTT--TGCTGTCTGCATTCAGAGTCCAAGACTCAGGGA---TGAAGCGTCCGTATAACTCATTCAGTA-CCCCCATCTCCCCACCCCCACCACAGCCCAGCGcccaaacaca----------ccagccaccacgcctctgctcgggccgccctgcctgctgggcaccttcattcgcccttgaccaccgggcgcgctcctacgctgccctcaacacactacgcaggtgttgc------ttcctccgtgaagccaatgcagacgagctttccacggtggtcccctggcatggccatatctgtgccacccttacgggccttatcacac--ttggtgatgactgttca--ggtgtgtc----------------tccccagcagtgctgagtttcttgaggatctgcatggagcatcgcctgcatggagcatcgcc--ttttgtgtcccTTGAGCTGTGGGGTCCAACCTGA-TTGCCTCGGGACCCTCT-GGAGATTCTCAGGACCCATTCCCAGGGAG-CCCAGGCTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 57759 543 + 80997621 CTCCCCTGGATGCCACTGATGCTGT-GGGCTCCACCTGCCTTATGGGTCAGTGCGGGGAGCGCTT--TGCTGTCTGCATTCAGAGTCCAAGACTCAGGGA---TGAAGCGTCCGTATAACTCATTCAGTA-CCCCCATCTCCCCACCCCCACCACAGCCCAGCGCCCAAACACA----------ccagccaccacgcctctgctcgggccgccctgcctgctgggcaccttcattcgcccttgaccaccgggcgcgctcctacgctgccctcaacacactacgcaggtgttgc------ttcctccgtgaagccaaggcagacgagctttccacggtggtcccctggcatggccacatctgtgccacccttacgggccttatcacac--ttggtgatgactgttca--ggtgtgtc----------------tccccagcagtgctgagtttcttgaggATCTGCGTGGAGCATCGCCCGCGTGGAGCATCGCCATCTTTGTGGCCCTTGAGCTGTGGGGTCCAACCTGA-TTGCCTCGGGACCCTCT-GGAGATTCTCAGGACCCATTCCCAGGGAGCCCCAGGCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 67954 543 + 74645514 CTCCCCTGGATGCCACTGATGCTGT-GGGCTCCACCTGCCTTATGGGTCAGTGCGGGGAGCGCTT--TGCTGTCTGCATTCAGAGTCCAAGACTCAGGGA---TGAAGCGTCCGTATAACTCATTCAGTg-cccccatctccccacccccaccacagcccagcgcccaaacacaccagtgagctccagccaccacGCCTCTGCTCGGGCCGCCCTGCCTGCTGGGCACCCTCATTCGCCCTTGACCACCGGGCACACTCCTACGCTGCCCTCAACACACTACCCAGGTGTTGCTTCAGGTTCCTCCGTGAAGCCAATGCAGACGAGCTTTCCACGGTGGTCCCCTGGCATGGCCACATCTGTGCCACCTTCACGGGCCTTATCACAC--TCGGTGATGACTGTTCA--GGTGTGTC----------------TCCCCAGCAGGGCTGAGTTTCTTGAGGA----------------CCTGCATGGAGCATCGCCATCTTTGTGGCCCTTGAGCTGTGGGGTCCAACCTGA-TTGCCCTGGGACCCTCTGGGAGATTCTCAGGACCCATTCCCAGGGAG-CCCAGGCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 65679 531 + 75148670 CTCCCCTGGATGCCACTGATGCTGT-GGGCTCCACCTGCCTTACGGGTCAGTGCGGGGAGCGCTT--TGCTGTCTGCATTCAGAGTCCAAGACTCAGGGA---TGAAGCGTCCGTATAACTCATTCAGTG-CCCCCATCTCCCCACCCCCACCACAGCCCAGCAcccaaacacaccagtgagctccagccaccacgcctctgctcgggccgccctgcctcctgggcaccctcattcgcccttgaccaccgggcacactcctacgctgcccccaacacactacacagg------------ttcctccgtgaagccaatgcagacgagctttccacggcggtcccctggcatggccacatctgtgccaccctcacgggccgtatcacac--ttggtgatggctgttca--ggtgtgtc----------------tcctcagcggtgctgagtttcttgagga----------------cctgcatggagcatcgccatctttgtggccccTGAGCTGTGGGGTCCAACCTGA-TTGCCTCGGGACCCTCTGGGAGATTCTCAGGACCCATTCCCAGCGAG-CCCAGGCTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 874868 512 - 1291538 CTCCCCTGGATGCTCCTGACACTGA-GGGCTCCACCTGCCTTCTGGGTTAGCTTGGGG-GCCCTT--TGCAGTCTGCATTCAGAGTCAAAGACTCAGGGA---TGAAGGGTCCTTATAACTCATTCAGGAACCCCCATC-CCTCACCCCCTCTGCAGTCCAGCGCCCAAACGTACCCATGAGCTCAAGCTACCACACCTCTGCTCAGG-CACTCTGCCTGCTGGGCGGCTTCACCCACCCTTGACCACCCAGCA-------ATGCTGCCCTCAACACCCTACTCAGGTGT-GC------AGCCAAC---------------GTGAGCTTTCCACAGTGGT--------------ACATCTGTGCCACCCT-ATCGGCCTTATCACAC--TTGGTGACTGTTGTTCA--AGGCCACCCCCACCTGCAAGGCAGTCCCCAACGGTGTTGAATTTCTTGAGGA----------------CCTGGGTGGGACACCACCATCTTTGTGGCCCCTAAGCTGGGGGGTCCAGATTGA--GGCCTCGGAATCCCCTGGGAGGTTCTCGGGACCCACCCCCAGGGAG-CCCAGGCTT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15634508 453 - 61074082 CCCCCCTTG----CCCCCATGCTGC----------CTGCCTTCTGGGTGAGTGTGTGGAGCACTTGGTGGCATCTGTACTTAGAGTCAAAGAGTTAGGGACAGTGAAGGGCTCCTCCAACTCCTTGGGCA----------CCTCTCCTGCTGCTCAGGCCGGTGCCCAGACA-----------------------GCCGCTGGCGGGGCTGCC---TCTGC-------CCTCACCCCTCCCTGAGCAGCCAGC-----CCCTCGGTGCCCTCCACGC-CAGCACAGGTG----------TTCTTCC-------------------------CACCATGTCCCCTTG---TGGCCACGTCCGTGACATGTT-ACAGGGCTTGTCACACATCTGGTGATTTTAGTTTAAGAGTCTGTC----------------TCCCCAACAGGGTCAAATTTCTTGAGGA----------------CCTGGAGGGAACCGCTCCATCTCTGTGGCCCTTGAGATGTGGGGTGTTACTTCAGGTGACTTTGGACCGCCCAGGAGGTCCTCGGGACTCACCCTCAGAGAG-GCCTGGAGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I a score=205217.000000 s hg38.chr17_GL383563v3_alt 132491 101 + 375691 CAGGCCCAGGGTGGGG-------------------CCCAGTATTCtgagg-cgggagtt--ccggcagagctttca--------ccagctctgcgaatgtggaaacggagg--ccgagaggcggcctgagctg s panTro4.chr17 130240 101 + 82630442 CAGGCCCAGGGTGGGG-------------------CCCAGTATTCTGAAG-CGGGAGTT--CCGGCAGAGCTTTCA--------CCAGCtctgcgaatgtggaaacggagg--ccgagaggcggcctgagctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 27854 101 + 73212453 CCGGCCCAGGGTAGGG-------------------CCCAGTATTCTGAAG-CGGGAGTT--CCAGCAGAGCTTTCA--------CCAGCtttgcgaatgtggaaatggaga--ccgacaggtggcctgagctg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 57309 91 + 80904711 CAGGCCCAGGGTAGGG-------------------CCCAGTATTCTGAAG-CGGGGGTT--CCGGCAG------------------AGCtttgcgaatgtggaaacggagg--ctgagaggtggcctgagctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 58302 91 + 80997621 CAGGCCCCGGGTAGGG-------------------CCCAGTATTCTGAAG-CGGGGGTT--CCGGCAG------------------AGCtttgcgaatgtggaaacggagg--ctgagaggtggcctgagctg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68497 100 + 74645514 CAAGCCCAGGGTAGGG--------------------CCAGTGTTCTGAAG-CGGGGGTT--CCGCCAGAGCTTTCA--------CCAGCTTTGCGAACGTGGAAACGGAGG--CTGAGAGGTGGCCTGAGCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 66210 101 + 75148670 CAGGCCCAGGGTAGGG-------------------CCCagtattctgaag-cgggggtt--ccggcagagctttca--------ccagctttgcgaatgtggaaacggagg--ctgagaggtggcctgaggtg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 875380 101 - 1291538 CAAGCCCAGAGTAGGG-------------------CC--ATGTTCTGGAG-CAGGGTTCTACCAGCACGGCTTccc--------ccatctttgtgaacatggaattggagg--ccgagaggcggcctgagctg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15634961 123 - 61074082 ------TGGAGTGGGGCCTGGGAATCACCCACGTTCCCAGGGTTCTGCAGTCAGGGG----CAGGCAGGGTCCACAAGCATGGCACATCTTGGCTAACATggaaaccgaggtcccgagaggtgccccaacctg i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I e nomLeu3.chr19 88658 100 - 81552678 M a score=146235.000000 s hg38.chr17_GL383563v3_alt 132592 43 + 375691 tccaaggtcatacagcaactgggaggcagggccagggctcccg s panTro4.chr17 130341 43 + 82630442 tccaaggtcatacagcaactgggaggcagggccagggctcccg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 27955 43 + 73212453 tccaaggtcatacagtaacggtgaggcagggccagggctcccg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 88759 42 - 81552678 TCCAAGGTCA-ACAGCAACTGTGAGGTGGGGCCAGGGCTCCCG i nomLeu3.chr19 M 100 C 0 s rheMac3.chr16 57400 43 + 80904711 tccaaggtcatagagcaactatgaggcagggccagggctcccg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 58393 43 + 80997621 tccaaggtcatagagcaactatgaggcagggccagggctcccg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68597 43 + 74645514 TCCAAGGTCATAGAGCAACTATGAGGCAGGGCCAGGGCTCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 66311 43 + 75148670 tccaaggtcatagagcaactatgaggcagggccagggctcccg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 875481 43 - 1291538 tccaaggtcatgtagcaacattgaggcagggccagggctccta i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15635084 43 - 61074082 tccaaggtcatccagtaattttgaggcagggacagggcttgag i canFam3.chr9 C 0 C 0 e mm10.chr11 75804575 2598 + 122082543 I a score=3065136.000000 s hg38.chr17_GL383563v3_alt 132635 985 + 375691 gctccc----------------------------------------------------tctgg--ggt----tct---------------agctcagggctcAAAGTCCACCCCTGTGTGGCCAGCGGG--------GAGAC----------TGTTCCT---ACCGCACCTGGCTTCCAGCAGCCCCGGTGGTGACTGTGGCTCACGCCTT--------CCCACAGGGCCTTGGTAGGAAGGTCTTAGGACTCAGGAAGAGCCCATTTCA-T---GCTTTTGTCCTACCCTCC----C-----------------------------------------------------CACTTTCACACCTGTGC---------------------------------------------------------------A-GGCTCAC--------------------------------------------------AGCCCC--------Acctacct---cggggcctttg----------------------------------cactgt-----ccag--ggcctc-----------ctcctggaatattctgccaccaaaccatcccatggggggctcatcctca--ctgaaggtctca-ctcgaggccaactcctagggaggcctGGG-GAAC-CGTGGAAAGCAGCTGTGTTCAGGCCCTGCTCATTTCT---GGTCTGCAAGCCTCCTTGGAGGCAGAGGCCTAGCCTGGTGCCTGGCTCATGCAGGGCAAGCACTCAATTCACGGAGGTGGAAGGGAGG----------------------------------CAGCCGTGGGGGAGACCACCGGG----TGACA---GGGCAGC-TGGGTGGGAGGAGGAGGGA--------------------GGCCAGCCCGGCTCCTCCCTGCCTGTGCG---G-----CTCCCACTCTGGGCCAGTGGCCTTGGAG-------ACAGCAGCGTTTAGAGGGAGGAGGGAGGGCGAGCGGAGGGCCATCCATCAGC-GGGGAACGTGTAGAGCCTCGTAAATCAGGGAGGCTGTCTGAGGCCCCTG---------TGCCAAGCATCTGCTG---------GCGTCTGGGAGCCT---GGGAGGGCAG--------------------------GCTGCTCCTCCGGGGAAAGGAGACAGCCA----CGCCTCGGGGCTCCCCTAGTTGAGGAGGGCGGG-------------CAAGCCT------------CCCTCCGTCTC--CCCAG-------------------GCACTTCAGTGTGT-----TATCCCAA------------ATACCTAACAGCCCCCACCCCAA-CCTGCA--------AGGCAGGCCATAATTTTGTTTTAATTATTTTGAATTTTAATACACAAGACTGTAGAAAATAACATAACAAATCCCAAAACATATCCACC----CTAACTTTTTCATTTTTTATGGAGGGttttgttt s panTro4.chr17 130384 985 + 82630442 gctccc----------------------------------------------------tctgg--ggt----tct---------------agctcagggctcAAAGTCCACCCCTGTGTGGCCAGCGGG--------GAGAC----------TGTTCCT---ACCTCACCTGGCTTCCAGCAGTCCCGGTGGTGACTGTGGCTCACGCCTT--------CCCACAGGGCCTTGGTAGAAAGGTCTTAGTACTCAGGAAGAGCCCATTTCA-T---GCTTTTGTCCTACCCTCC----C-----------------------------------------------------CACTTTCACACCTGTGC---------------------------------------------------------------A-GGCTCAC--------------------------------------------------AGCCCC--------Acctacct---cggggcctttg----------------------------------cattgg-----ccag--ggcctc-----------ctcctggaatattctgccaccaaaccatcccatggggggctcatcctca--ctgaaggtctca-ctcgaggccaactcctagggaggcctGGG-GAAC-CGTGGAAAGCAGCTGTGTTCAGGCCCTGCTCATTTCT---GGTCTGCAAGCCTCCTTGGAGGCAGAGGCCTAGCCTGGTGCCTGGCTCATGCAGGGCAAGCACTCAATTCACGGAGGTGGAAGGGAGG----------------------------------CAGCCGTGGGGGAGACCACCGGG----TGACA---GGGCAGC-TGGGTGGGCGGAGGAAGGA--------------------GGCCAGCCCGGCTCCTCCCTGCCTGTGCG---G-----CTCCCACTCTGGGCCAGTGGCCTTGGAG-------ACAGCAGCGTTTAGAGGGAGGAGGGAGGGCGAGCGGAGGGCCATCCATCAGT-GGGGAACGTGTAGAGCCTCGTAAATCAGGGAGGCTGTCTGAGGCCCCTG---------TGCCAAGCATCTGCTG---------GCGTCTGGGAGCCT---GGGAGGGCAG--------------------------GCTGCTCCTCCGGGGAATGGAGACAGCCA----CGCCTCGGGGCTCCCCTGGTTGAGGAGGGCGGG-------------CAAGCCT------------CCCTCCGTCTC--CCCAG-------------------GCACTTCAGTGTGT-----TATCCCAA------------ATACCTAACAGCCCCCACCCCAA-CCTGCA--------AGGCAGGCCATAATTTTGTTTCAATTATTTTGAATTTTAATACACAAGACTGTAGAAAATAACATAACAAATCCCAAAACATATCCACC----CTAACtttttcattttttatggagggttttgttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 27998 988 + 73212453 gctccc----------------------------------------------------tctgg--ggt----tct---------------agctcagggctcGAAGTCTACACCAGTGCGGCCAGCGGG--------GAGAC----------TGTTCCT---ACCCCACCTGGCTTCCAGCAGCCCCGGTGGTGACTGTGGCTAAC-CCCT--------CCCACAGGGCCTTGCTAGAAAGTTCTTAGTACTCAGGAAGAACCCATTTCA-T---GCTTTTGTCCTACCCTCC----C-----------------------------------------------------CACTTTCACACCTGCCC---------------------------------------------------------------A-GGCTCAc--------------------------------------------------agccac--------acctatct---cagggcctttg----------------------------------cactgg-----ccag--ggcctc-----------ctcctggaatattctggcaccaaaccatcccaaggggggctcatcctca--ctgaagttctca-ctcgaggccaactcctagagaggcctGGG-GAAC-CGTGGAAAGCAGCTGTGTTCAGGTCCTGCTCATTTCT---GGTCTGCAAGGCTCCTTGGAGGCAGAGGCCTAGCCTGGTGCCTGGCTCACGGAGGGCAAGCACTCAATTCACGGAGGTGGAAGGGAGG----------------------------------CAGCCATGGGGCCGACCACCGGG----TGACG---GGGCAGC-TGGGTGGGAGGAGGGGGGA--------------------GGCCAGCCCGGCTCCTCCCTGCCTGTGCG---G-----CTCCCACTCTGGGCCTGTGGCCTTGGAG-------ACAGCAGCGTTTAGAGGGAGGAGGGAGGGCGAGGGGAGGGCCAGCCATCAGC-GGGGAACGTGTAGAGCCTCGTAAATCAGGGAGGCTGTCTGAGGCCCCTT---------TGCCAAGCATCTGATG---------GCGTCTGGGAGCCT---GGGGGGGCAG--------------------------GCTGCTCCTCCGGGGAATGGAGACAGCCA----CGCCTCGGGGCTCCCCTAGTTGAGGAGGGCGGG-------------CAAGCCT------------CCCTCCCTTTC--CCCAG-------------------GCACTTCAGTGTGT-----TATCCCAA------------ATACCCAACAGCCCCCACCCCAA-CCTGCA--------AGGCAGGCCATAATTTTGTTTTAATTATTTTGAATTTTAATACACAAGACTGTAGAAAATAACATAACAAATCCCAAAACATATCCACCCAAACTAACATTTTTATTTTTTATGGAGGGttttgttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 88801 985 - 81552678 GTTCCC----------------------------------------------------TCTGG--GGT----TCT---------------AGCTCAGGGCTCGAAGTCCACCCCAGTGCGGCCAGTGGG--------GAGAC----------TGTTCCT---ACCCCACCTGGCTTCCAGCAGCCCCGGTGGTGACTGTGGCTCACCCCCT--------CCCACAGGGCCTTGGTAGAAAGTTCTTAGTACTCAGGAAGAACCCATTTCA-T---GCTTTCGTCCTACCCTCC----C-----------------------------------------------------CACTTTCACACCTGCCC---------------------------------------------------------------A-GGTTCAC--------------------------------------------------AGCCCC--------Acctacct---cagggcctctg----------------------------------cactgg-----ccag--ggcctc-----------ctcctggaatattctggcaccaaaccatcccatggggggctcatcctca--ctgaagttctca-ctcgaggccagttcctagagaggcctGGG-GAAC-TGTGGAAAACAGCTGTGTTTAGGTCCTGCTCATTTCT---GGTCTGCAAGGCTCCTTGGAGGCAGAGGCCTAGCCTGGTGCCTGGCTCATGGAGGGCAAGCACTCAATTCACGGAGGTAGAAGGGAGG----------------------------------CAGCCGTGTGGGAGATCACCGGG----TGACG---GGGCAGC-TGGGTGGGAGGAGGAGGGA--------------------GGCCAGCCCGGCTCCTCCCTGCCTGTACG---G-----CTCCCACTCTGGGCCTGTGGCCTTGGAG-------ACAGCAGCGTTTAGAGGGAGGAGGGAGGGCGAGCGGAGGGCCATCCATCAGC-GGGGAACGTGTAGAGCCTCGTAAATCAGGGAGGCTCTCTGAGGCCCCTT---------TGCCAAGCATCTGCTG---------GCGTCTGGGAGCCT---GGGAGGGCAG--------------------------GCTGCTCCTCCAGGGATTGGAGACAGCCA----CGCCTC-GGGCCCCCCTGGTTGAGGAGGGCAGG-------------CAAGCCT------------CCCTCCCTTTC--CCCAG-------------------GCACTTCAGTGCGT-----TATCCCAA------------ATACCTAACAGCCCCCATCC----CCTGCA--------AGGCAGGCCACAATTTTGTTTTAATTATTTTGAATTTTAATACACAAAACTGTAGAAAATAACATAACAAATCCCAAAACATATCCACCCAAACTAACATTTTCATTTTTTATGAAGGGttttgttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 57443 971 + 80904711 gctccc----------------------------------------------------tctgg--ggt----tct---------------agctcagggctccaagtccaccccagtgcGGCTGGCGGG--------GGGAC----------TGTTCCT---GCCCCACCTGGCTTCCCGCAGCCCCAGTGGTGACTGTTGCTCATCCCCT--------CCCACAGGGCCTTGGTAGAAAGTTCTTAGTACTCAGGAAGAACCCGTTTCAGT---GCTTTTGTCCCACCCTCC----C-----------------------------------------------------CACTCTCACCCCTGCcc---------------------------------------------------------------a-ggctcac--------------------------------------------------ggtccc--------acctccct---cagggccttt-----------------------------------cactgg-----ccag--ggcctc-----------ctcttggaacattctggcaccaaaccatcccatggggggctc--------------ggtctca-cTCGAGGCCGACTCCTAGAGCGGCCTGGG-GAAC--GTGGAAAGCAGCTGTGTTCAGGTCCTGCT-GTTTCT---GGCCTGCGAGGCTCCTTGGAGGCAGAGACCCAGTCGGGTGCCTGGCTCGTGGCGGGCAGGCCCTCGATGCACGGAGGTGGGAGGGAGG----------------------------------CAG-CGTGGGGGAGACCACTGGG----TGACG---GGGCAGC-TGGGTGGGAGGAGGAGGGA--------------------GGCCAGCCCGGCTCCTCCCTGCCTGTGCA---G-----CTCCCACTCTGGGCCTGTGGCCTTGGAG-------ACAGCAGCGTTTAGAGGGAGGAGGGAGGGCGAGCGGAGGGCCGTCCATCAGC--GGGAACGTGGAGAGCCTCGTAAATCAGGGAGGCTGTCTGAGG-CCCTT---------TGCCAAGCATCTGCTG---------GCGTCCGGGAGCCT---GGGAGGGCAG--------------------------GTTGCTCCTCTGGGGGTTGGAGGCAGCCA----CACCTC-GGGCTCCCCTAGTTGAGGAAGGCGGG-------------CAAGCCT------------CCCTCCCTTTC--CCCAG-------------------GCACTTCCGTGTGT-----TATCCCAA------------ATTCCTCACAGCCCCCACCCCAA-CCTGCA--------AGGCAGGCCATCATTTTCTTTTAATTATTTTGAATTTTATTACACAAGACTGTAGAAAATAACATAACAAATCCCAAAACATATCCACCCAAACTAACACTTTCATTTTTTATGGAGGGttttgttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 58436 971 + 80997621 gctccc----------------------------------------------------tctgg--ggt----tct---------------agctcagggctccaagtccaccccagtgcGGCTGGCGGG--------GGGAC----------TGTTCCT---GCCCCACCTGGCTTCCCGCAGCCCCAGTGGTGACTGTGGCTCATCCCCT--------CCCACAGGGCCTTGGTAGAAAGTTCTTAGTACTCAGGAAGAACCCGTTTCAGT---GCTTTTGTCCCACCCTCC----C-----------------------------------------------------CACTCTCACCCCTGCcc---------------------------------------------------------------a-ggctcac--------------------------------------------------ggtccc--------acctccct---cagggccttt-----------------------------------cactgg-----ccag--ggcctc-----------ctcttggaacattctgacaccaaaccatcccatggggggctc--------------ggtctca-cTCGAGGCTGATTCCTAGAGCGGCCTGGG-GAAC--GTGGAAAGCAGCTGTGTTCAGGTCCTGCT-GTTTCT---GGCCTGCGAGGCTCCTTGGAGGCAGAGACCCAGCCGGGTGCCTGGCTCGTGGCGGGCAGGCCCTCAATGCACGGAGGTGGGAGGGAGG----------------------------------CAG-CGTGGGGGAGACCACTGGG----TGACG---GGGCAGC-TGGGTGGGAGGAGGAGGGA--------------------GGCCAGCCCGGCTCCTCCCTGCCTGTGCA---G-----CTCCCACTCTGGGCCTGTGGCCTTGGAG-------ACAGCAGCGTTTAGAGGGAGGAGGGAGGGCGAGCGGAGGGCCGTCCATCAGC--GGGAACGTGGAGAGCCTCGTAAATCAGGGAGGCTGTCTGAGG-CCCTT---------TGCCAAGCATCTGCTG---------GCGTCCGGGAGCCT---GGGAGGGCAG--------------------------GTTGCTCCTCTGGGGGTTGGAGGCAGCCA----CACCTC-AGGCTCCCCTAGTTGAGGAAGGCGGG-------------CAAGCCT------------CCCTCCCTTTC--CCCAG-------------------GCACTTCCGTGTGT-----TATCCCAA------------ATTCCTCACAGCCCCCACCCCAA-CCTGCA--------AGGCAGGCCATCATTTTGTTTTAATTATTTTGAATTTTATTACACAAGACTGTAGAAAATAACATAACAAATCCCAAAACATATCCACCCAAACTAACACTTTCATTTTTTATGGAGGGttttgttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68640 983 + 74645514 GCTCCC----------------------------------------------------TCTGG--GGT----TCC---------------AGCTCAGGGCTCCAAGTCCACCCCAGTGCGGCCAGCGGG--------GGGAC----------TGTTCCT---GCCCCACCTGGCTTCCCGCAGCCGCAGTGGTGACTGTGGCTCATCCCCT--------CCCACAGGGCCTTGGTAGAAAGTTCTTAGTACTCAGGAAGAACCCGTTTCAGT---GCTTTTGtcccaccctcc----c-----------------------------------------------------cactctcACCCCTGCCC---------------------------------------------------------------A-GGCTCAC--------------------------------------------------GGTCCC--------ACCTCCCT---CAGGGCCTTT-----------------------------------CACTGG-----CCAG--GGCCTC-----------CTCTTGGAACATTCTGGCACCAAACCATCCCCTGGGGGGCTCATTCTCA--CTGAAGGTCTCA-CTCGAGGCGGACTCCTAGAGAGGCCTGGG-GAAC--GTGGAAAGCAGCTGTGTTCAGGTCCTGCT-GTTTCT---GGTCTGCGAGGCTCCTTGGGGGCAGAGACCCAGCCAGGTGCCCGGCTCGTGGTGGGCAAGCCCTCAATTcatggaggtgggagggagg----------------------------------cag-cgtgggggagaccactggg----tgacg---gggcagc-tgggtgggaggaggaggga--------------------ggccagCCCGGCTCCTCCCTGCCGGTGCA---G-----CTCCCACTCTAGGCCTGTGGCCTTGGAG-------ACAGCAGCGTttagagggaggagggagggcgaGCGGAGGGCCGTCCATCAGC--GGGAACGTGGAGAGCCTCGTAAATCAGGGAGGCTGTCTGAGG-CCCTT---------TGCCAAGCATCTGCTG---------GCGTCCGGGAGTCT---GGGAGGGCAG--------------------------GTTGCTCCTCTGGGGGTTGGAGGCAGCCA----CACCTT-GGGCTCCCCTAGTTGAAGAGGGCGGA-------------Caagcct------------ccctccctttc--cccag-------------------gcACTTCCGTGTGT-----TATCCCAA------------ATTCCTcacagcccccaccccaa-cctgCA--------AGGCAGgccataattttgttttaattattttgaattttattacaCAAGACTGTAGAAAATAACATAACAAATTCCAAAACATATCCACCCAAACTAacactttcattttttatggagggttttgttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 66354 982 + 75148670 gctccc----------------------------------------------------tctgg--ggt----tcc---------------agctcagggctccaagtccaGCCCAGCGCGGCCAGCGGG--------GGGAC----------TGTTCCT---GCCCCACCTGGCTTCCCGAAGCCCCAGTGGTGACTGTGGCTCATCCCCT--------CCCACAGGGCCTTGGTAGAAAGTTCTTAGTACTCAGGAAGACCCCACTTCAGT---GCTTTTGTCCTACCCTCC----C-----------------------------------------------------CACTTTCACCCCTGCcc---------------------------------------------------------------a-ggctcac--------------------------------------------------agtccc--------acctccct---cagggccttt-----------------------------------cactgg-----ccag--ggcctc-----------ctcttggaacattctggcaccaaaccatcccatggggggctcattctca--ctgaaggtctca-ctcgaggccgactcctagaggggcctGAG-GAAC--GTGGAAAGCAGCTGTGTTCGGGTCCTGCT-CTTTCT---GGTCTGCGAGGCTCCTTGGAGGCAGAGACCCAGCGGGGTGCCTGGCTTGTGGTGGGAAGGCCCTTAATTCACGGAGGTGGGAGGGAGG----------------------------------CAG-TGTGGGGGAGACCCCTGGG----TGACG---GGGCAGC-TGGGT-GGAGGAGGAGGGA--------------------GGCCAGCCCGGCTCCTCCCTGCCTGTGCA---G-----CTCCCACTCTGGGCCTGTGGCCTTGCAG-------ACAGCAGCGTTTAGAGGGAGGAGGGAGGGCGAGCGGAGGGCCATCCATCAGC--GGGAACGTGGAGAGCCTCGTAAATCAGGGAGGCTGTCTGAGG-CCCTT---------TGCCAAGCATCTGCCG---------GCGTCCGGGAACCT---GGGAGGGCAG--------------------------GTTGCTCCTCTGGGGGTTGGAGGCAGCCA----CACCTC-GGGCTCCCCTAGTTGAGGAGGGCGGA-------------CACGCCT------------CCCTCCCTTTC--CCCAG-------------------GCACTTCCGTGTGT-----TATCCCAA------------ATACCTCACAGCCCCCACCCCAA-CCTGCA--------AGGCAGGCCATAATTTTGTTTTAATTATTTTGAATTTTATTACACAAGACTGTAGAAAATAACATAACAAATTCCAAAACATATCCACCCAAACTAACACTTTCATTTTTTATGGAGGGttttgttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 875524 956 - 1291538 gctccc----------------------------------------------------tctcg--agctctatct---------------agctcagGGCTTG--------------GCGGCCACCAGG--------GTGAC----------GGTTCCT---GCCCCACATAGCTACCAGCAGCCAAGATGGTGACTGTGGCTCACCCCCT--------ATTACAGGGCCTTGG-ACAAAGTTCCTCTTACTCAGGAAGAACCCATTTCAGG---GCTTTCGTCCT-CTCTCC----C-----------------------------------------------------CACACTCCCATCTGCCC---------------------------------------------------------------A-GGCTCAC--------------------------------------------------AGCCCC--------GTCTGCCTCTGCAGAACAAGAG----------------------------------CCCTGG-----CCGG--TGCCAC-----------CTCCTGGAATATCCTGACACCAAAGCATCCCATGAGGGGCTCATTCACA--CTGAAGGTGTCC-CTGGAGGCCAAGTCCTCGCGAGGCCTGGG-GAAC-TGTCGAAAGCAGCTGTGTTCAGGTCCTGCTCCTTTCT---GCTCTGCAAGGCTCCTTGGAGGCAGGGACCTAGCCTGGTGCTTGACTCACGGAGGACAAGCACTCAGCTCACAGAGGTGGAAGGGAGG----------------------------------CAGCCATGGGGTA-AGCACTGAG----TGAC----GGGCAGC-TGGGTAGGAGGAGGAGGGA--------------------GGCCAGCCTGGCTCCTCCCTGCCTGTGCA---G-----CTCCCACTCTGGGCCAGTGGCCTTGGAGACTGGAAACAGCAGCGCTTAGAGGGAGGAGGGAGTGGGAGCGGAGGGCCATCCATCAGC--GGGAACACGGAGAGCCTCATAAATCAGGGAGGCTGTCTG-----------------------------TGCCG---------GTGTCTGGGAGCCT---GGG-GGGCAG--------------------------GCTGCTCTCT--GGGATTGGAGGCGGCCA----CGCCTCGGGGCTGCCCTAGTTGAGGAGGGTGGG-------------TGAGCCT------------CCCTTCCTTTC--CT--G-------------------GCATTTCGGCATGT-----GAT-CCAA------------ATACCTAACGGCCCCCACCCCCA-TCTGCA--------AGGCAGGCCATAATTTTGTTTTAATGATTCTGATTTTTAGTACACAAGAC--TAGAAAATAGCATAACGAATCCAAAAACATATCCACC-AAACTAACATTTTCATTTTCTATGGAGGGttttgttt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75807173 1045 + 122082543 GCTACT----------------------------------------------------TCTGGCCATA----TCT---------------GGCTCAGGGCTTGAAGTCCACCCCATCCAGGCCACAGAG--------GGGTCTTTCAGGGGTTGTTCCC---TTGGCCCCTTGGTTCTTGTAGCC----------------------ACCT--------CTGACAGAACC-----AGAGAATGCGTAGTCCTTAGAAAGAATCTAACTCTGTTTATTTTTTGTCCTAACCTCCATCTC-----------------------------------------------------GTGCCTTAAGCCTGTAC---------------------------------------------------------------ACTACTGAA--------------------------------------------------ACCCAG--------ACATgtct---cagggccttcg----------------------------------taccat-----cgaa--ttcccca----------ctcctgggacatcctcccgtcaagtcacctca-agatgtccctttttcattttgtgggtcttagctcaaggccagctcctAGAGATGCCAGAGAGGGC-CGTAGAAAGCAGCTGTGTTCC-CTCCTGTTTATTGCTTAATGTCTGCAAG-CTTCTTGGAGACAGGAACTTAGC--ACTGACTGTCTCCCAGCTGATGGGCACTCGACTCACAGTGATAGGAGGCAGC----------------------------------TGCTCCTGG------TCACAGGT----TTACAGATGGGCATC-TGGG-AGGAGAAGCCTGCAGAGC---CCCCAGCCCTG--GACCAGCCCTGCTCCTCCCTGCCCGCACC---AGCTCTCTCCCACTCCA-GCAGGTGGCCTTGGAG-------ACAGCAGCATTTAGAGGGAGGA-GGAGGCAGAGTGGAGGGTCATCCGTCAGG----------CGAGAGCCTGGGAAGTCAGAGAGGCTGTCTGAGGCCCCTTAGCAGCATCTGCCTGGCACTCACCA---------TCATTTGAGAGCCTAAGGGGCGGGCGG--------------------------GCTGTCCCT--GGGCACTGGAGAGAGCCAGGGTAGCCCC-AGGATCATGGTGGTGGGGGAGCTAGT-------------CAGGGCTTCTCGCTCATTACCTTCCTTTTCAACCCAGATATTTACTTCATAATAAAACATTTAAGAACATATACATCTCCCAA------------AG--CTGGCAGATTCCATCTGGAGCCTTCATCCTCTCTCAGAAGGCAATTATTTTGTTTGAGTTATTTTGAATTTTGATACGCAGGATT----ACACTGACATAGTAAACTCAAAAACCTAGCCACCAAAATCAGTATTTTCATCTTTTTTAGAGTTTTTTTTTT i mm10.chr11 I 2598 I 791 s canFam3.chr9 15635127 1407 - 61074082 gctccctacctccctctgctctGAGGGGCAGAGAGGGTGGTCATCCCCTCTCCTGCCATCTGG--GAT----CCTCTAGAAGCAACCTTAGGTTCAAGGCTTAAAGCCCA-CTCAGTA-AGCCAGTGGGGGTTTCCTGGGGC----------TCCTCCCTTGGCCCTGCCTGGGTTCTGGTGGCCCTGGTGGTGACTCTACCTTGACACCTCCCCTTGCCCCCCAGGGCCATGGCAGAGGGTATTCAGTCTTGAGGAGGAATCCATTTCATT---TCCTTCATCCAATCCtcc----cctgaacagaagcatgggcttgcctcagggcatttgtactagcctgctccttttctctTTCCCTCCCTCCCTCCCTTCTTTCTtttctttttaaaatattttatttatttgagagagaaacaaagagatagggag-agcgcaccatgagcagggggcaggggcagagggagaagcagatgccctgcgagtgagagcccccagacgggacccaatc---caggaccccgagatcatgacctgagcctaaattagttgcttaagccactgagccacccaggcggcccCAGTCAGCTTCTTTTCTAAAATATTCTTACACCAAATCACTTGATGGGTGCCTCATTCTCACCTTTTAGATCTCTGTTCCAGACCCTCTTCTAGAGAGGCCTGAC-AACCCCACCGAAGCCAAGGGTGCTCA--------TTGTTTAC---TGTCCA-GGGGCTCCCTTGGGGCAGGGATCTAGCTCAGGGCCTGGCCCCTGCTGGTGGAG--CTCCGTTCACAGGAGTTGAAGGGGAGGGATCTGAGCAAAACAGCACCCCAGGCCTAGCTCTGGCTGTGGGTGAGACCCCGGGGTTACTGGCA---GGGCAGCTTGGGTGGAAGGAGGCCGGAAGGCCAGCCCAGGCCCTGCCAGCCCGCCCAGCTCCTCCC-GCCTGTGAACGTG-----CTCCCACTCTGGGCGGGTGGCCTTGGAG-------ACAGAAGCATTTAGAGGGAGGAGAGAGGGAAAGCACA-GGTCATCCATCAGCAGGGAGACGTGGAGAGCCTGGTAAATCAGGGAGGCTGTCTGAGGCCCCTT---------TGGCAACTGTCTGCCAGCGCTCAGTGCGTCTGGGAGCCC---GGGGAGGGGGTGAGGCTGAGGGGCCGCTGCAGTGCAGCTGCTCCCATGGGGACTGAGAGCAGCCAAGGTAACCCCAGGGCCACCCTGGTTGAGGAGGGAGGACCGAGGTGATGCTCAGGGCT------------CTGCCCCCCTC--CT-GT-------------------GCGCTTCAGTCTGT-----GGTCCCAGAAGAGTCTCATTACCCTCTACAACCCTCACCCCAG-CCCGCA---------GGCAAGCCATTATCTTGTTTTAACTATTTTGAATTTCAACAAATAAGAGTATAGAGATTAACATAACAAACCCCAAAACATTCTCAACAAAATGAACCCTTTCAtgttt---------gtttgttt i canFam3.chr9 C 0 C 0 a score=56689.000000 s hg38.chr17_GL383563v3_alt 133620 21 + 375691 agtttgcttttc-t-ttaagagt s panTro4.chr17 131369 15 + 82630442 agtttgc--------ttaagagt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 28986 22 + 73212453 ggtttgcttttctt-ttaagagt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 89786 21 - 81552678 ggtttgcttttc-t-ttaagagt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 58414 21 + 80904711 ggtttgcttttc-t-ttaagagt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 59407 21 + 80997621 ggtttgcttttc-t-ttaagagt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 69623 21 + 74645514 ggtttgcttttc-t-ttaagagt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 67336 21 + 75148670 ggtttgcttttc-t-ttaagagt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 876480 21 - 1291538 ggtttgcttctc-t-tgaagagt i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15636534 21 - 61074082 -gtttgtttgtt-tgttGAGGGT i canFam3.chr9 C 0 I 161 e mm10.chr11 75808218 791 + 122082543 I a score=1705320.000000 s hg38.chr17_GL383563v3_alt 133641 624 + 375691 cggggtcttgctctgtcgcccaggctggagtgccgtggcacaatcacggttcactgcagcctccacctcctgggctcaagtgattctcccacctcagccccctcagtagctgggactacaggcacatcccactacaaccggct-aatttttttgta-------------tttttttgcagagacgggttttcgccatgttgcccaggctgatctcaaactactgggctagagtgatgctcccccgttagcctctgaaattgctgggattacaggtgcgagccaccgctcccagccCGAGAtttttgaactcataagattgtgaacgatagcatataaaactgcataaaacacagttgcctaaaatgattagttataaagcagacatcagcataatcaccacccaagtcatgaaacaggaagttgccagccttccccacccccagcatgtgtttctctcattaggcacctctccctgcccccATGAttatttatttttttagagatggcgacttgctatattgcccaggctggacttgaactcctggatgcaaacgatcctcctgccttagcctcccgagtagctaagaccacaggcccacgccattgtgcctggcTTTGCCGTTTTTATGTTA--------------------TGACT s panTro4.chr17 131384 624 + 82630442 cggggtcttgctctgtcgcccaggctggagtgcagtggcacaatcacggttcactgcagcctccacctcctgggctcaagtgattctcccacctcagccccctcagtagctgggactacaggcacatcccactacaaccggct-aatttttttgta-------------tttttttgcagagacgggttttcgccatgttgcccaggctgatctcaaactactgggctagagtgatgctcccccgttagcctctgaaattgctgggattacaggtgcgagccaccgctcccagccCGAGAtttttgaactcataagattgtgaacgatagcatataaaactgcataaaacacagttgcctaaaatgattagttataaagcagacatcagcataattaccacccaagtcatgaaacaggaagttgccagccttccccacccccagcgtgtgtttctctcattaggcacctctccctgcccccATGAttatttatttttttagagatggagacttgctatattgcccaggctggacttgaactcctggatgcaaacgatcctcctgccttagcctcccgagtagctaagaccgcaggcccacgccattgtgcctggcTTTGCCATTTTTATGTTA--------------------TGACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 29008 619 + 73212453 cagggtcttgctctgtcgcccaggctggagtgcagtggcgcaatcacggttcactgcagcctccacctcctgggctcaagtgatcctcccacctcagccccctcagtagttgggactacaggcacatcccaccacaacctgctaaatttttttgta-------------ttttcttgcagagacgggttttcaccatgttgcccaggctggtctcaaactaccgggctagagtgatcctcccccattagcctccgaaagtgctgggattacaggtgcgagccactgctcccagccTGAGATTTTTGAACTCATAAGattgtgaacgacagcatataaaactgcataaaacacagttgcctaaaatgat------taaagcagacatcagcacagtcaccacccaactcatgaaacaggaagttgccagccttccccacccccagcgtgtgtttctctcattaggcacctctccctgcccccatgattatttatttttttagaggtggagacttgctatattgcccaggctggacttgaactcctggacgcaaacgatcctcctgccttagcctcccgagtagctgagaccgcaggcccacgccattgtgcctggctttgccgtttttatgtta--------------------tgact i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 89807 624 - 81552678 cagggtcttgctctgtcgcccaggctggagtgcagtggtaccatcacggttcactgcagcctccacctcctgggctcaagtgatcctcccacctcagccccctcagtagctgggactacaggcacatcccaccacaaccggct-aatttttttgta-------------tttttttgcagagacgggttttcgccatgatgcccaggctggtctcaaactaccgggctagagtgaccctcccccgttagcctctgaaagtgctgggattacaggtgcgagccaccgctcccagccTGAGATTTTTGAACCCACAAGattgtgaacgatggcatatgaaactgcatagaacacagttgcctaaagtgattagttataaagcagacatcagcataatcaccacccaagtcatgaaacaggaagttgccagccttccccacgcccggcatgtgtttctctcatgaggcacctctccctgcccccATGAttatttattcttttagagatggagacttgctgtactgcccaggctggacttgagctcctggacgcaaacgatcctcctgccttagcctcctgagtagctgagaccgcaggcccacgccattgtgcctggcTTTGCCGGTTTTATATTA--------------------TGACT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 58435 619 + 80904711 cagagtcttgctctgtcgcccaggctgcagtgcagcggcacaatcacggttcatcgcagcctccacctcctgggctcaagtgatcctcccacctcagccccctgagtaacggggactacaggcacatgccaccacaaccggct-aatttgcttgta---------tttttttttttgcagagacagggtttcgccatgttgcccaggctgctctcaaactactgggctagactcatcctccccggttagcctcc-aaagtgctgggattacaggtgcgagccaccattcccagccTGAGAtttttgaactcataagattgtgaacgacagcatataaaactgcataaaacacagttgcctcaaatgattagttccaaag-agacgtcaacataaccaccacccaagtcacgcagccagaagttgccagccttccccac-cccagcatgggtttctcccattaggcacctctccctgcccccAGGAttatttatg-ttttagagatggagacttgctatattgcccagactggactggaactcctggaatcaaacgatcctcctgccttagcctcccgagtagctgagaccaca-----acgccattgtgcctggcTCTGCCTTTTTTTTATTG--------------------TGACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 59428 622 + 80997621 cagagtcttgctctgtcgcccaggctgcagtgcagcggcacaatcacggttcaccgcagcctccacctcctgggctcaagtgatcctcccacctcagccccctgagtaacggggactacaggcacacgccaccacaaccggct-aatttgcttgta------ttttttttttttttgcagagacagggtttcgccatgttgcccaggctgctctcaaactactgggctagactcatcctccccggttagcctcc-aaagtgctgggattacaggtgcgagccaccattcccagccTGAGAtttttgaactcataagattgtgaacgacagcatataaaactgcataaaacacagttgcctcaaatgattagttccaaag-agacgtcaacataaccaccacccaagtcacgcagcgagaagttgccagccttccccac-cccagcatgggtttctcccattaggcacctctccctgcccccAGGAttatttatg-ttttagagatggagacttgctatattgcccagactggacttgaactcctggaatcaaacgatcctcctgccttagcctcccgagtagctgagaccaca-----acgccattgtgcctggcTTTGCCTTTTTTTTATTG--------------------TGACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 69644 619 + 74645514 cagagtcttgctctgtcgcccaggctgcagcgcagtggcacaatcacggttcaccgcagcctccacctcctgggctcaagtgatcctcccacctcagccccctgagtaacggggactacaggcacatgccaccacaaccggct-aatttgtttgta--------ttttttttttttgcagagacagggtttcgccatgttgcccaggctgctctcaaactgctgggctggAGTCATCCGCCCTGgttagcctccgaaagtgctgggattacaggtgcgagccaccgttcccagcctgAGATTTTTGAACTCATAAGATTGTGAACGATGGCATATAAAACTGCGTAAAACACAGTTGCCTCAAATGATTAGTTACAAAG-AGACATCAGCATAATCACCACC--AGTCACGCAGCAAGAAGTTGCCAGCCTTCCCCAC-CCCAGCACGGGTTTCTCCCATTAGgcacctctccctgcccccatgattatttatc-ttttagagatggagacttgctatattgcccagactggacttgaactcctggactcaaacgatcctcctgccttagcctcccgagtagctgagaccaca-----acgccattgtgcctggctttgccttttttttattg--------------------tgact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 67357 634 + 75148670 cagagtcttgctctgtcgcccaggctgcagtgcagtggcactatcacggttcactgcagcctccacctcctgggctcaagtgatcctcccacctcagccccctgagtaacggggactacaggcacatgacaccacaaccagct-aatttgtttgtttttgtttttttttttttttttcagagacagggtttcgccatgttgcccaggctgctctcaaactactgggctagagtcatcctccccggttagcctccgaaagtgctgggattacaggtgcgagccaccattcccagccTGAGAtttttgaactcataagattgtgaacaatagcatagaaaactgcatacaacacagttgcctcaaatgattagttacaaag-acacatcagcataatcaccacccaagtcacgaagcaagaagttgccagcCTTCCCCAT-CCCAGCACGGGTTTCTCCCATCAGGCACCTCTCCCTGCCCCCAGGAttatttatt-ttttagagatggagacttgctatattgcccagactggacttgaactcctggacacaaacgatcctcctgccttagcctcccgagtagctgagaccgcaggcccacggcattgtgcctggcTTTGCCTTTTTTATATTG--------------------TGACT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 876501 610 - 1291538 catggtcttgctctgttg----------------------caatcacgattcactgtagcctcaacctcctgggctcaagcga-cctcccaccacagccccctgagcagctggaaccacaggcacatgccaccacatcc-gct-ag-ttgtttgta-------------tttttttgcagagatgggatttcaccatgttgcccaggttggtctcaaactcctgggctgaagcgatcctcccccgttagcctccgaaagtgctgggattacaggcttgagccaccactcccggACTGAGATTTTTTAACTCAAAAGattgtaagcgatagaacataaaactgcataaaacacagttgcctaaaatgattagttacaaagcagacatcagcataattaccacctgagtcatgaaacaggaagtgaccaaccttccctgcccccaccacgtgtttctctcattcagcacctctccctgcccccGTTATTACTGGtttctttagagatggagacttgctgttttgcccaggctggacttgaactcctggacacaaacaatactcctgccttggcctcctgagt---tgagaccac------acaccattgtgcctggcTTTGCCCTTATTATAATATAATAATAAGGGCATGTGCCTGATT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75808218 791 + 122082543 I e canFam3.chr9 15636555 161 - 61074082 I a score=112500.000000 s hg38.chr17_GL383563v3_alt 134265 38 + 375691 TTATGTGACATCGTTGCCCA----GCTTTCCTGGCCTTTAAA s panTro4.chr17 132008 38 + 82630442 TTATGTGACATCGTTGCCCA----GCTTTCCTGGCCTTTAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 29627 38 + 73212453 ttatgtgacatcattgccca----gctttcctCGTCTTTTAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 90431 38 - 81552678 TTATGTGACATCATTGCCCA----GCTTTCCTGGTCTTTTAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 59054 42 + 80904711 TTATGTGACACCATTGCATATGGCGCTTTCCTGGTCTTTTAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 60050 42 + 80997621 TTATGTGACACCATTGCATATGGCGCTTTCCTGGTCTTTTAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 70263 42 + 74645514 tTACGTGACACCATTGCACATGGCGCTTTcctggtcttttaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 67991 42 + 75148670 TTACGTGACACCATTGCACATGGCGCTTTCCTGGTCTTTTAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 877111 38 - 1291538 TTACGTGACATCACTGCTCA----GCTTTCCTGGTCTTTTAA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15636716 36 - 61074082 TTCTGTGACACCATGGCCTG----GATTTCCCAG--TTTTAA i canFam3.chr9 I 161 C 0 e mm10.chr11 75808218 791 + 122082543 I a score=1234398.000000 s hg38.chr17_GL383563v3_alt 134303 383 + 375691 AAGTATAAATACAATAAAACATTACAGATAAAAA-TTCCCTTCTTGTGTCTCAA-------Ccccaccccaggg-gcaagcataattatga---gatttacatatgt-cattccaggctgcatttgatatttttacgacaaa------tattagagaagtattgttttacatagtttaaaacgtttcacaaatgacaacaatactgtgtatattattctgcaagtt--gctttttcactaactctaaatgcttttt--aaaaaacagctgt-attgagacataatttatacaccataaaattcaaccattttaagtgcacaatttaatg---atttttagtaaatttaaagacttgtgcaaccaccagcaAatttaaagacttgtgcaaccaccagcacaatccaagttt s panTro4.chr17 132046 355 + 82630442 AAGTAtaaatacaataaaacattacagataaaaa-ttcccttcttgtgtctcaa-------ccccaccccaggg-gcaagcataattatga---gatttacatatat-cattccagcctgcatttgatatttttacgacaaa------tattagagaagtattgttttacatagtttaaaacgtttcacaaatgacaacaatactgtgtatattattctgcaagtt--gctttttcactAACTCTAAATGCTtttt--taaaaacagctgt-attgagacataatttatacaccataaaattcaaccattttaagtgcacaatttaatg---atttttagt----------------------------aaatttaaagacttgtgcaaccaccagcacaatccaatttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 29665 360 + 73212453 AAGTATAAATACAATAAAACATTAGAGATAAAAa-ttcccttctcgtgtctcaa-------ccccatcccaggg-gcaagcataattatga---aatttacatatat-tattccaggctgcatttgatatttttacgacatatatttgtattagagaagtattgttttacatagtttaaaacgtttcataaatgacaacaatactgtgtatattattctgcaagtt--gctttttcactAACTCTAAATGA-tttt--aaaaaacagctgt-attgaggcacaatttatacaccataaaattcaaccactttaagtgcacaatttaatg---atttttagt----------------------------aaatttaaagacttgtgcaaccaccagcacaatccaatttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 90469 361 - 81552678 AAGTAtaaacacaataaaacattacagataaaaa-tccccttcttgtgtctcaa-------ccccaccccaggg-gtaagcataattatga---aacttacatgtat-cattctaggctgcatttgacatttttactacatatatttgtattagagaagtattgttttacatagtttaaaactattcataaatgacaaccatactgtgtatattattctgcaagtt--gttttttcattAACTCTAAATGCttttt--aaaaaacagctgc-attgaggcataatttatacaccataaaattcaaccatttcaagtgtacaatttaatg---atttttagt----------------------------aaatttaaagacttgtgcaaccacgagcacaatccaatttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 59096 362 + 80904711 AAATAtaaatacaataaaacattacagataaaaa-ttcccttcttgtgtctcag-------ccccaccccagggagcgagcgtaattatga---aatttacacatgt-cattccaggctgcatttcatattttcactacatatatttgtattagagaagtattgttttacatagtttaaaacttttcataaatgacaacaatagtgtgtatattattctgcaagtt--gctttttcactAACTCTAAGTGCttttt--aaaaaacagcttt-attgaggcataatttatacaccataaaattcaaccattgcaagtgcacaatttaatg---atttttagt----------------------------aaatgtaaagagttgtgcaaccaccagcacaatccaatttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 60092 362 + 80997621 AAATACAAATACaataaaacattacagataaaaa-ttcccttcttgtgtctcag-------ccccaccccagggagcgagcgtaattatga---aatttacacatgt-cattccaggctgcatttcatattttcactacatatatttgtattagagaagtattgttttacatagtttaaaacttttcataaatgacaacaatagtgtgtatattattctgcaagtt--gctttttcactAACTCTAAGTGCttttt--aaaaaacagcttt-attgaggcataatttatacaccataaaattcaaccatttcaagtgcacaatttaatg---atttttagt----------------------------aaatgtaaagagttgtgcaaccaccagcacaatccaatttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 70305 362 + 74645514 aaatataaatacaataaaacattacAGATAAAAA-TTCCCTTCTTGTGTCTCAG-------CCCCACCCCAGGGAGCGAGCGTAATTATGA---AATTTACGCATAC-CATTCCAGGCTGCATTCGGTATTTTCACTACATATGTTTGTATTAGAGAAGTTTTGTTTTACATAGTTTAAAACTTTTCATAAATGACAACAATAGTGTGTATATTTTTCTGCAAGTT--GTTTTTTCACTAACtctaagtgcttttt--aaaaaacaggttt-attgaggcataatttataCACCATAAAATTCAGCCATTTCAAGTGcacaatttaatg---atttttagt----------------------------aaatgtaaagagttgtgcaaccaccagCACCatccaatttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 68033 362 + 75148670 AAATAtaaatacaataaaacattacagataaaaa-ttcccttcttgtgtctcag-------ccccaccccagggagcgagcgtaattatga---aatttacacatgt-cattccaggctgcatccggtattttcactacatatatttgtattagagaagtattgtttcacatagtttaaaacttttcataaatgacaacaatagtgtgtatattattctgcaggtt--gctttttcactAACTCTAAGTGCttttt--aaaaaacggcttt-attgaggcataatttatacaccataaaattcaaccatttcaagtgcacaatttaatg---atttttagt----------------------------aaatgtaaagagttgtgcaaccaccagcacaatccaatttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 877149 335 - 1291538 AAATATAAATACAGTAAAACATTACAGATCAAAA-TTCCCTTCCTGAGGCTCAA-------CCCCACCTCAGTGGGCAAGCATAATTTTGA---AATCTACATACAT-CATTCCAGGCTGTATTTGATATTTTTACTATACA---------------------------CATAGTTTAAAGCTTTTCATAAATAAAAGCGAGCCTATATATATTATTCTGCAAGTT--GCTTTTTCACTAACTCCAAATGCCttgt--aaaaaacagcttt-atcgaggcataatttatgcaccataaaattcaaccatttcaagtgcacgatttaatg---atttttagt----------------------------aaatttaaagagttgtgcaaccatcagcacaatccaatttt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75809009 341 + 122082543 AAATATAAATACACTAAAGTACTACAGATAAAAATTTCCCTTCTTGTGTTCCAG-------CCCCACTCCAAGAGGCAGGCCCATTAATTG---AACTCACATAGAC-CATGCCAGGCCAAGCTGTGTATTTTTAACATGTAAAT----------------TTATTTTTCATAGTTTAAAACTTTGCATAAACGACAGGACTCCTGGACCTATTACTCTGCACAGTGAGTTTTTTACCCATCTCTAGATGGtcttt--taaaagctgccct-actgaggtgtaatttatgcaccataag-----------ccaagtatacaaccaagcgcttactttgggt----------------------------aagcgttcagagctgagcatccatcagcagaatccggtttt i mm10.chr11 I 791 C 0 s canFam3.chr9 15636752 363 - 61074082 AAATGTCCATATTGTGAAATACCACAGATAAAACTTTcccttcctgggtctcatggccaaccccctctcccgcgagtgaacataataatgatgcagctgatgtgggtcccctcggggcagacttcaagatttttactatgggtatttgtatagcagcagtattgttttatccagtttagaactgtccataaatggca-caatactgcatgcattattctgcaactC-------------AGCTCTGAATGCCttattaaaaaaacagctttaattgaggcataatttatatgctataaaactcaaccgtttt--gtgtacgagataatg---atttttagt----------------------------aaatttacatggttgtgtaactatccgcacaatccaatttt i canFam3.chr9 C 0 C 0 a score=461539.000000 s hg38.chr17_GL383563v3_alt 134686 170 + 375691 agatcatttccatccctcctaaaaACTCTAAATAggctgggcatggtggctcgtgcctgtaatcccagcactttgggaaggcagggtgaaaggattttaagaggccag--gagttgcagaccagcccgggcaacatagtgagatcctgtctctacacaaaa-aattttttttc s panTro4.chr17 132401 170 + 82630442 agatcatttccatccctcctaaaaACTCTAAATAggctgggcatggtggctcgtgcctgtaatcccagcactttgggaaggcagggtgaaaggattttaagaggccag--gagttgcagaccagcccgggcaacatagtgagatcctgtctctacacaaaa-aattttttttc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 30025 168 + 73212453 agatcatttccatccctcctaaaaACTCTAAATAggctgggcatggtggctcatgcttgtaatcccagcactttgggaaggcagggtgaaaggattttaagaggccag--gagttccagaccagcctgggcaac-tagtgagatcctgtctctacaaaaaa-aa-tttttttc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 90830 170 - 81552678 agatcatttccatcccccctaaaaACTCTAAATTggctgggcatggtggctcatgcccgtaatcccagcactttgggaaggcagggtgaaaggattttaagaggccag--gagttccagaccagcctgggcaacatagtgagatcctgtctctacaaataa-aaatttttttc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 59458 169 + 80904711 agaacatttccatccctcctaaaaACTCTAAATAggctgggcacggtggctcatgcctgtaatcccagcattttgggaaagcaggatgaaaggattttgagaggccag--gagttccagaccagcctgggcaacacagtgagatcctgtctctacaaaaca--tttttttttc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 60454 169 + 80997621 agaacatttccatccctcctaaaaACTCTAAATAggctgggcacggtggctcatgcctgtaatcccagcattttgggaaagcaggatgaaaggattttgagaggccag--gagttccagaccagcctgggcaacacagtgagatcctgtctctacaaaaca--tttttttttc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 70667 168 + 74645514 agaacatttccatccctCCTAAAAACtctaaataggctgggcacggtggctcacgcctgtaatcccagcactttgggaaggcaggATGAAAGGATTttcagaggccag--gagttccagaccagcctgggcaacacagggagatcctgtctctacaaaata---ttttttttc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 68395 171 + 75148670 agaacatttccatcccccctaaaaACTCTAAATAggctgggcatggtggctcgtgcctgtaatcccagcactttgggaaggcaggatgaaaggattttgagaggccag--gagttccagaccagcctgggcaacacagtgagatcctgtctctacaaaacatttttttttttc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 877484 166 - 1291538 agaacatttctatccctcctaaaaACTCCAAATAggctgggcatggtggctcatgcctgtaatcccagtactttgggaggccagggtgaaaggattgagagaggccag--gagttctgaatcagcctgggcaacacagcgagatcctgtctctacaaaatg-----tttgttc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75809350 49 + 122082543 agaacaaccccatccctcccaa-----------------------------------------------------------------------------GGCGGCCAGATGCATTCCA--------------------------TTTTTCTC--------------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15637115 0 - 61074082 C a score=178348.000000 s hg38.chr17_GL383563v3_alt 134856 62 + 375691 aaaaattacctggacacagtggctgcacctgtagtcccagctacttgggaggctgaggtggg s panTro4.chr17 132571 62 + 82630442 aaaaattacctggacacagtggctgcacctgtagtcccagctacttgggaggctgaggcggg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 30193 62 + 73212453 aaaaattacctggacacagtggctgcacctgtagtcccagctacttgggaggctgaggtggg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 91000 62 - 81552678 aaaaattacctggacacagtggctgcacctgtagtcccagccacttgtgaggctgaggtggg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 59627 61 + 80904711 aaaaatta-cgggacacagtggctgcagctgcagtccctgcttcttgggaggctgaggtggg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 60623 61 + 80997621 aaaaatta-ctagacacagtggctgcagctgcagtcccagcttcttgggaggctgaggtggg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 70835 61 + 74645514 aaaaatta-ctggacacagtggctgcccctgcagtcccagctacttgggaggctgaggtggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 68566 61 + 75148670 aaaaatta-ctggacacagtggctgcccctgcagtcccagctacttgggaggctgaggtggg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 877650 62 - 1291538 aaaaattacctggacacagtggatgcacctgtagccccagctacttgggaggctgagtcggg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75809399 0 + 122082543 C e canFam3.chr9 15637115 0 - 61074082 C a score=152276.000000 s hg38.chr17_GL383563v3_alt 134918 63 + 375691 aggattgcttgagcccaggagttccaggatgtagtgagctaggatctcgccgctgaactccag s panTro4.chr17 132633 63 + 82630442 aggattgcttgagcccaggagttctaggatgtagtgagccaggatctcgccgctgaactccag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 30255 63 + 73212453 aggattgcttgagcccaggagtcccaggatgtagtgagctaggatctcgccgctgaactccag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 91062 63 - 81552678 aggactgcttgagcccaggcgttccaggatgttgtgagctgggatctcgccactgaactccag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 59688 63 + 80904711 aggattgcttgagcccaggagttccagcacgtagtgagctaggatctcgccgctgcactccgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 60684 63 + 80997621 aggattgcttgagcccaggagttccagcacgtagtgagctaggatctcgccgctgcactccgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 70896 63 + 74645514 aggattgcttgagcccaggagttccagcaCGTAGTGAGCTAGGATCTTGCCGTCGCACTCCGg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 68627 63 + 75148670 aggattgcttgagcccaggagttccagcacgtaatgagctaggatctcgccactgcactccgg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 877712 56 - 1291538 aagact------gcccagcagttccag-atgcagtgaattaccgtctcaccgctgcacccccg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15637115 16 - 61074082 agaactgtttcatccc----------------------------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75809399 0 + 122082543 C a score=972363.000000 s hg38.chr17_GL383563v3_alt 134981 367 + 375691 ctttgggcgacagagcaagatcttgtctctgaagag-aaaaCTGTCTAAATGCTTTTTTGCTTTCTCTCTTTTTTTTTCCTAAGTGC-CTTTGATACACATTTtaataactgccccttataaagctcctgc-atgtgccaagcactgctgcaa-ggtattaaatatgcgaccacattcactcctcatagcaactcca-caaggtgacagtcttagggacgatgacacggaggcaga---gggggtaacaaactgtccacggtcaccctattagaaactcacagaacaggt-----------------ggctgcaaacc--cag---tctgaccccagagtcagccacttagccacCCACTG---------------TGAATTCATGCACTCTTACTGTCGCGTGCTAtgtca s panTro4.chr17 132696 367 + 82630442 ctttgggcgacggagcaagatcttgtctctgaagag-aaaaCAGTCTAAATGCTTTTTTGCTTTCTCTCTTTTTTTTTCCTAAGTGC-CTTTGATACACATTTtaataactgccccttataaagctcctgc-atgtgccaagcactgctgcaa-ggtgttaaatatgccaccacgttcactcctcatagcaactcca-caaggtgagagtcttagggacgatgacacggaggcaga---gggggtaacaaactgtccacggtcaccctattagaaactcacagaacaggt-----------------ggctgcaaacc--cag---tctgaccccagagtcagccacttagccacCCACTG---------------TGAATTCATGCACTCTTACTGTtgtgtgctatgtca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 30318 385 + 73212453 ctttgggtggcagagcaagatcctgtctctaaagagaaaaaaaGTCCAAATGCTTTTTTGCTTTCTCTCTTTTTTTTTCCTAAGTGC-TTTTGATACACATTTtaataactgccccttataaagctcctgctatgtgccaagcactgctgtaa-ggtgttaaatatgccaccacattcactcctcatagcagctcca-caaggtgacagtcttagggatgctgacacggaggcacag--gggggtaacaaactgtccacggtcaccctattagaaactcacacagcaggt-----------------ggctgcaaacc--cag---tctgaccccagagtcagccacttagccacCCACTGCACAGCCACCCACTCTGAATTCACGCACTCTTACTGTCGTGTGCTAtgtca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 91125 356 - 81552678 ctttgggcgacagagcaagatcctgtctctaaagagaaaaCCAGTCTAAATGCttttttgctttctctctttttttttttt-------------tCCTGATTTtaataactgccccctataaacctcct---atgtgccaagcactgctgtaa-ggtgttaaatacgccaccacgttcactcctcatagcaactcca-caaggtgacagtctcagggatggtgacacggaggcacaga-gggggtcacaaactgtccacggtcaccctgttagaaactcacagaacaggt-----------------ggctgcaaacc--cag---tcccaccccagagtcAGCCACTCGGCCACCCACTT---------------TGAATTCATGCACTCTTACTGTCGTGTGccgtgtca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 59751 375 + 80904711 ctttgggcgacagagcaagatcctgtctctaaaacgaaaaaaaGTCTAAATGCTTTTTGGCTTTCTCTC-TTTTTTTTCCTCAGTGC-TTTTGATACACATTTtaataaccgccccttataaagctcctgctatgtgccaagaactgcggtaa-ggagttaagt-tgccaccacattcactcctcatagcaactcta-caaagtgacagtcttcc----gatgacacggaggcacag--gggggcaacaaactgtccacggccaccctgttagaaactcacagaaca--------------------ggctgcaaacc--cag---tctgaccccagagtcagcc-cttagccacccactacacAGCCACTCACTCTGCATTCACGCACTCTTACTGTCGTGTGCTAtgtca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 60747 375 + 80997621 ctttgggcgacagagcaagatcctgtctctaaaacgaaaaaaaGTCTAAATGCTTTTTGGCTTTCTCTC-TTTTTTTTCCTCAGTGC-TTTTGATACACATTTtaataaccgccccttataaagctcctgctatgtgccaagaactgcggtaa-ggagttaagt-tgccaccacattcactcctcatagcaactcta-caaagtgacagtcttcc----gatgacacggaggcacag--gggggcaacaaactgtccacggccaccctgttagaaactcacagaaca--------------------ggctgcaaacc--cag---tctgaccccagagtcagcc-cttagccacccactacacAGCCACTCACTCTGCATTCATGCACTCTTACTGTCGTGTGCTAtgtca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 70959 376 + 74645514 ctttgggcgacagagcaagatcctgtctctaaaaagaaaagaagtctaaATGCTTtttggctctctctc-ttttttttcctcagtgc-ttttgatacacattttaaaaactgcccCTTATAAAGCTCCTGCTATGTGCCAAGAACTGCAGTAA-GGAGTTAAAT-TGCCACCACATTCACTCCTCACAGCAACTCTA-CAAACTGACAGTCTTCCG---GATGACACGGAGGCACAG--GGGGGCAACAAACTGTCCACGGCCACCCTGTTAGAAACTCACAGAACA--------------------GGCTGCAAACC--CAG---TCTGACCCCAGAGTCAGCC-CTTAGCCACCCACTACACAGCCACCCACTCCGCATTCATGCACTCTTACTGTCGTGTGCTATGTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 68690 376 + 75148670 ctttgggcgacagagcaagatcctgtctctaaaaagaaaaaaaGTCTAAATGCTTTTTGGCTTTCTCTCTTTTTTTTTCCTCAGTGC-TTTTGATACACATTTtaataactgccccttataaagctcctgctatgtgccaagaactgcggtga-ggtgttaact-tgccaccacattcactcctcgcagcacctcca-caaagtgacagtcttcgg---gatgacacggaggcaca---gggggcaacaaactgtccacggccaccctgttagaaactcacagaaca--------------------ggctgcaaacc--cag---tctgaccccagagtcagcc-ctcagccacCCACTGCACAGCCACCCACTCTGCATTCATGCACTCTTACTGTCGTGTGCTGtgtca i chlSab2.chr16 C 0 I 316 s calJac3.chrUn_GL286409 877768 395 - 1291538 c-tgagccgacagagcaggatcccgtctccaaaaagaaaaaaaGTCTCAGTGCTTTTTCGCTTTCTCTC--CTTTTTTCCTAAGTGCTTTTTGATACACATTTt---aactgccccttataaagcttctgctctgtgccaagcacagctgtaagggtgttaaatatgtcaccacatttaacattcatagcaactcca-caaggtgacagtcttagggacgatgacacggaggcacc---gggcgtaacaaactgtccacggccaccctattagaaggtcacagaataggccgcaaggtcacagaataggccgcaaacccacag---tctgaccccagagtcagccacctgaccacCCCACACACAGCTGCCT----TGCACTCATGCACTCTTACTGCCGTGTGGTAtgtca i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75809399 278 + 122082543 CCTTGGGC------------------------------------TTCAAGTGCTTTTTGG-----------------------------------ACAGATTTTGATTCCTGTCCCTCAGGAagcccctggtgggtgccaccccatgctctag-gaacatta---tgttacttcagttagtcctcaggacagctc-a-gaaatagcgaattttggagacaatg--acggaggcatagaggaggacaagaagctgccgaaggtcacccagat------------------------------------aCCACCACACA--CAG---GCTGAGCCCTAGGCCAGCCCATCGGCAACTCAGACC--------------CGggaccatagattgtcactgctggagtgggggccc i mm10.chr11 C 0 C 0 s canFam3.chr9 15637131 315 - 61074082 --------------------tcctg--------------aaaagTCTAAATAGTTTTTTGTTTTCTCTT-----TTTCTCTAAATGCTTCTCAACACACATTTTACTGgctg-ccgttataaagctcccactgtgtgccaagcactgttcaca-------cagtatatcact-cactgagccctgacagcccctgtgtcagggagggtctcttagagaccgggacacgg-ggcacaga-gagggcgagaaaccacccgagctcacactgcaagaaacctgcaggaca--------------------ggctgtgaatg--cggcctcctgagcccagagcctgCAATGCAACAGTCC-------------------------CATGTGTGCCTGCTCCGGCGTCCGAGAGCC i canFam3.chr9 C 0 C 0 a score=698049.000000 s hg38.chr17_GL383563v3_alt 135348 267 + 375691 ------ggcaaatgtttttatcctacggtatgaatgagaaaccgaggcttggaggggttaagtgacttgctcagtatcactggacagagaataacagagctggggtttgaatctacgtctacgtgactt-caagc-tcg-ctggccctttGCTGGTCTCTGGTCTCCTTGGCTGCCTTTCCTTTTTTTCATTACAGTAAAGGAATAAAAG-----AGAGAAAAGAGGAGGATGGGTGGAAAGGGGGA------GAGAGAGATGCCAGAA---AAAGC---------ttttatttttatg s panTro4.chr17 133063 260 + 82630442 ------ggcaaatgtttttatccgacggtatgaatgagaaaccgaggcttggaggggttaagtgacttgctcagtatcactggacagagaataacagagctggggtttgaatctaggtctatgtgactt-caagc-tcg-ctggccctttG-------CTGGTCTCCTTGGCTGCCTTTCCTTTTTTTCATTACAGTAAAGGAATAAAAG-----AGAGAAAAGAGGAGGATGGGTGGAAACGGGGA------GAGAGAGATGCCAGAA---AAAGC---------ttttatttttatt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 30703 258 + 73212453 ------ggcaaatgtttttatcccacggtatgaatgagaaactgaggcttggaggggttaagtgacttgctcagtatcactagacagagaataacaaagctggggtttgaatctaggtctatgtgactt-caagc-tcg-ctggccctttg-------ctggtctccttggctgcctttcCTTTTTTCCATTACAGCAAAGGAATAAAAG-----AGAGAAAAGAGGAGGATGGGTGGAAAGGGGGA------GAGAGAGATGTCAGAG---AAAGC---------ttt--tttttttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 91481 241 - 81552678 ------ggcaaatgtctttctcccacggtatgaacgagaaaccgaggcttggagggg---------ttgtccagtatcactggacagagaataacagagctggggtttgaatctaggtctatgtgactt-caagc-tcg-caggccctttg-------ctgatctccttggcTGCCTTTCCTTTTTTTCATTACAGTAAAGGAATAAAAG-----AGAGAAAAGTGGAGGATGGGTGGAAAGGGGGA------GAGAAAGATGTCAGAA---AAAGC---------ttt---------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 60126 266 + 80904711 ------ggcaaatgtttttatcccacggtatgaatgagaaaccgaggcttggatgggttaagtgacttgctcagtatcactggagagagaataacagagctggggtttgaatctaggtctacgtgactt-caagc-tcg-ctggcgctttg-------ctggtctcctcagctgcctttcCTTTTTTTCATTACAGTAAAGGAATAAAAG-----ACAGAAAAGAGGAGGATGGGTGGAAAGCGG--------GAGAGAGACGTCAGAA---AAAGC-ttttttttttttttttttttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 61122 267 + 80997621 ------ggcaaatgtttttatcccacggtatgaatgagaaaccgaggcttggatgggttaagtgacttgctcagtatcactggagagagaataacagagctggggtttgaatctaggtctacgtgactt-caagc-tcg-ctggcgctttG-------CTGGTCTCCTCAGCTGCCTTTCCTTTTTTTCATTACAGTAAAGGAATAAAAG-----ACAGAAAAGAGGAGGATGGGTGGAAAGCGG--------GAGAGAGACGTCAGAA---AAAGCtttttttttttttttttttttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 71335 263 + 74645514 ------GGCAAATGTTTTTATCCCACGGTATGAATGAGAAACCGAGGCTTGGaggggttaagtgacttgctcagtaTCACTGGACAGAGAATAACAGAGCTGGGGTTTGAATCTAGGTCTACGTGACTT-CAAGC-TCG-CTGGCACTTTG-------CTGGTCTCCTCagctgcctttccttttcttcattacagtaaaggaataaaag-----acagaaaagaggagGATGGGTGGAAAGCGGGA------GAGAGAGACAtcagaa---aaagt------tttttttttttttttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 69382 247 + 75148670 ------ggcaaatgtttttatcccacagtatgaatgagaaaccgaggcttggaggggttaaatgacttgctcagtatcactggacagagaataacagagctggggtttgaatctaggtctacgtgactt-caagC-TTG-CTGGCGCGTTG-------CTGGTCTTCTCAGCTGCCTTTCCTTTTTTTCATTACAGTAAAGGAATAAAAG-----ACAGAAAAGAGGAGGATGGGTGGAAAGCAGGA------GAGAGAAACGTCAGAA---AAAGC---------------------- i chlSab2.chr16 I 316 C 0 s calJac3.chrUn_GL286409 878163 243 - 1291538 ------ggcaaatgtttttatcccaccatacgaatgagaaaccaaggcctggagggggtgagtgacgtgctcagcattgctggatggagaatgacagtg--gggatttggatttaggtccatgtgactt-caagc-tcgcctggccccttg-------ctggtctcctaggctgcctttcCTTTT---CATTACAGTCAAG----------------AGAAAAGAAGAGGATGAGTGGAAAGGGGGA------GAGAGTTATGTCATAA---AAAGC---------ttt--tttttttt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75809677 187 + 122082543 ------tgcaaatgctgtgatcccact---caaatgataaat---ggatttaaatagttgtgtggc-tgctggagaccccagg---gacagtggcagagctgggacttgga-ccaaacctgtgtgactcacaAGCATGG-CTAACCCCTGG-------CTGGTCTCCTTTGCTTCCTTCTTACTTTCTGgtttt---------------------------------------------------------------------------------gt------tttgttttgttttgtt i mm10.chr11 C 0 C 0 s canFam3.chr9 15637446 244 - 61074082 CGCGTTGGCCTGTGGTGCAGTC------TGTCAAGCAAACACC----CCCAGAAGGG-----------ACTCTGAGGCTTTGGATGGGAACTGGCCGAGCTGGCATTCAGACCCATGGCCCTGTGACTTCCAGGT-CCC-CTGGCCCTCTT-------CTAGTCTCCTCTGCAGCTTGTCTTTTTTT--ATTATAGGGAAGGGAGAAAAGGAGAAAAAAGGAAGGGGAGGACGGATGgaaagagagagagagggagagagagGTCAGAATTTTAAG----------------------- i canFam3.chr9 C 0 I 167 a score=359093.000000 s hg38.chr17_GL383563v3_alt 135615 126 + 375691 ttttttttgaaatggagtctggctctgtca-ccatgctggagtg----cagtgg----tgagatcttggctcaccgcaacctctgcctcctggattca-agtgattctcctccctcagcctcccaagtagctggga s panTro4.chr17 133323 126 + 82630442 ttttttttgaaacggagtctggctctgtca-ccaggctggagtg----cagtgg----tgagatcttggctcaccgcaacctctgcctcctggattca-agcgactctcctccctcagcctcccaagtagctggga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 30961 126 + 73212453 ttttttttgaaacggagtctggctctgtcg-ccatgctggagtg----cagtgg----tgagatcttggctcaccacaacctctgcctcctgggttca-agtgattctcctccctcagcctcccaagtagctggga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 91722 126 - 81552678 ttttttttgaaatggagtctggctctgtcg-ccaggctggagtg----cagtgg----tgagatctcggctcactgcaacctctgcctcctgggttca-agtgattctcctccctcagcctcccaagtagctggga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 60392 127 + 80904711 tttttttaaagacagagtcaggctctgtcgcccaggctggagtg----cagtgg----tgcaatctccgctcactgcaacctccgcctcctgggttcg-agtgattctcctgcctcagcctcctgagtagctggga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 61389 127 + 80997621 tttttttaaagacagagtcaggctctgtcgcccaggctggagtg----cagtgg----tgcaatctccgctcactacaacctccgcctcctgggttcg-agtgattctcctgcctcagcctcctgagtagctggga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 71598 127 + 74645514 tttttttaaagacagagtcaggctctgtcgcccaggttggagtg----cagtgg----cgcgatctcggctcactgcaacctccgcctcctgggttca-agtgattctcctgcctcagcctcctgagtagctggga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 69629 127 + 75148670 ttttttttgagacagagtcaggctctgtcacccaggctggagtg----caatgg----tgcgatctcggctcactgcaagctccgcctcccgggttca-agtgattctcctgcctcagcctcctgagtagctggga i chlSab2.chr16 C 0 T 11669 s calJac3.chrUn_GL286409 878406 131 - 1291538 tctttattgagacggagtctcactctgtcacccaggctgtagtg----cagtgagtgctgtgatctcggctcactgcaacctacacctcctgggttca-agtgattctcctgcctcagcctcccaagtagctggga i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75809864 117 + 122082543 ttCCCTTGCCCCcagggttttgctctgtgtccctaattggcttggtacttgcta----tgcagcccaggctggct--------------ttgaactcatagcaatcctcttgtctcagccttccaagt-gctggaa i mm10.chr11 C 0 C 0 e canFam3.chr9 15637690 167 - 61074082 I a score=364446.000000 s hg38.chr17_GL383563v3_alt 135741 159 + 375691 ctacaggcacctgccaccacacccagc--------------taa----ttgtatttttagcagagata------------------------gggtttctccatgttggccaggctggtctcaaactcctgacctgaagtgatccaccatcccagcctcccaaagagctgggattacaggcatgagacaccgtgcctgacc s panTro4.chr17 133449 159 + 82630442 ctacaggcacctgccaccacacccagc--------------taa----ttgtatttttagcagagaca------------------------gggtttctccatgttggccaggctggtctcaaactcctgacctgaagtgatccaccatcccagcctcccaaagagctgggattacaggcatgagacaccatgcctgacc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 31087 163 + 73212453 ctacagacgcctgccaccacgcccagc--------------taattgtttgtatttttatcagagaca------------------------gggtttctccatgttggccaggctggtctcaaactcctgacctgaagtgatccaccatcccagcctcccaaagagctgggattacaggcatgagacactgcgcctggcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 91848 163 - 81552678 ctacacgcgcccgccaccacgcccagc--------------taattgtttgtatttttagcagagaca------------------------gggtttctccatgttggccaggctggtctcaaactcctgacctgaagtgatccaccatcccagcctcccaaagagctgggattacaggcatgagacactgcgcctggcc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 60519 163 + 80904711 ttacaggcgcccaccatcatgcccggc--------------taattgtttgtatttttagcagagaca------------------------gggtttcttcatgttggccaggctggtctcaaattcctgacctcaagtgatccaccctcccagcctcccaaagtgctgggattatgggcatgagacactgtgcccggcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 61516 163 + 80997621 ttacaggcgcccaccatcatgcccggc--------------taattgtttgtatttttagcagagaca------------------------gggtttcttcatgttggccaggctggtctcaaattcctgacctcaagtgatccaccctcccagcctcccaaagtgctgggattacgggcatgagacactgtgcccggcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 71725 159 + 74645514 ctacaggcgcccaccatcatgcccggc--------------taa----ttgtatttttagcagagaca------------------------gggtttctccatgttggccaggctggtctcaaattcctgacctcaagtgatccaccgtcccagcctcccaaagtgctgggattacaggcatgagacactgcacccgacT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 878537 163 - 1291538 ttacaggcatccaccatcatgacaagc--------------taattgttcgtgattttagtagagaca------------------------gggtttctccatgttggccaggctggtctcgaactctcgacttcaagtgatccactgtcccagcctcccaaagtgctgacattacaggtgtgagccaccatgcctggcc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75809981 174 + 122082543 ttataggtgtggaccactctgcttggcCCTTTTGTtttatttatttatttatttatttatttgagacatagtattatagcccaagcaaacatggaattatatatgtggcccaggctggctttgaacttatggtc---------ctttcggctcagcctcACA------------------TATATGCCACCATGTTTGGCC i mm10.chr11 C 0 I 40 e canFam3.chr9 15637690 167 - 61074082 I e chlSab2.chr16 69756 11669 + 75148670 T a score=222667.000000 s hg38.chr17_GL383563v3_alt 135900 87 + 375691 AGAACAAACTTTTAAATTCTTTTATGCTCA-GCCTATATCC-ACAGATACTTACATATATACATGTGCAACACAGGATCTCTGAACACC s panTro4.chr17 133608 87 + 82630442 AGAACAAACTTTTAAATTCTTTTATGCTCA-GCCTATATCC-ACAGATACTTACATATATACATGTGCAACACAGGATCTCTGAACACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 31250 87 + 73212453 AGAACAAACTTTTAAATTCTTTTATGCTCA-GCCTATATCC-ACAGATACTTACATATATACATGTGCAACACAGGATCTCTGAACACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 92011 87 - 81552678 AGAACAAACTTTTAAATTCTTTTATGCTCA-GCCTATATCC-ACAGATACTTACATATATACATGTGCAACACAGGATCTCTGAACACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 60682 87 + 80904711 AGAACAAACTTTTAAATTCTTTTATGCTCA-GCCTACATCC-ACAGATACTTACATACATACATGTGCAACACAGGATCTCTGAACACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 61679 87 + 80997621 AGAACAAACTTTTAAATTCTTTTATGCTCA-GCCtacatcc-acagatacttacatacatacatGTGCAACACAGGATCTCTGAACACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 71884 87 + 74645514 AGAACAAACTTTTAAATCCTTTTATGCTCA-GCCTACATCC-ACAGATacttacatacatacatgtgcaaTGCAGGATCTCTGAACACC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 878700 89 - 1291538 AGAACAAACTTTTAACTTCTTTTATGCTCATGCCGATATCAGGGATACACTTACATATGTACATGTGCAACACAGGATCTCTGAACACC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15637857 62 - 61074082 AGAACTAACTTTTAAATTCTTTTGTGCTCATGCATATA-CC-ACAAAAAC--ACATATATACCTGT----------------------- i canFam3.chr9 I 167 C 0 e mm10.chr11 75810155 40 + 122082543 I e chlSab2.chr16 69756 11669 + 75148670 T a score=308671.000000 s hg38.chr17_GL383563v3_alt 135987 192 + 375691 AACTCTAGTCAGTTGAGTGT--------------GTGCA---CAGTTCTGTGTGTGTAGGCTGTACACATGTGTGCACACACAT--GCATATGTGTACCTGAGAC-----CACATGTGCGTTcacacaccattccagatgcacacccacacaggtgtacacaccctaaaag--------------------------gcacacccacacaggcacatacaggtgcacacccacacaggcaca s panTro4.chr17 133695 192 + 82630442 AACTCTAGTCAGTTGAGTGT--------------GTGCA---CAGTTCTGTGTGTGTAGGCTGTACACATGTGTGCACACACAT--GCATATGTGTACCTAAGAC-----CACATGTGCGTTCACACACCATTCCAGATGcacacccacacaggtgtacacaccctaaaag--------------------------gcacacccacacaggcacatacaggtgcacacccacacaggcaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 31337 218 + 73212453 AACTCTAGTCACTTGAGTGT--------------GTGCA---CAGTTCTGTGTGTGTAGGCTGTACATGTGTGTGCACACACAT--GCATATATGTACCCAAGAC-----CACATGTGTGTTCACACACCATTCCAGATGCACACCCACGCAGGTGTACACACCCTAAAAGGcacacccacacaggcacatacaggtgcacacccacacaggcacatacaggtgcacacccacacaggcaca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 92098 175 - 81552678 AACTCTAGTCAGTTGAGTGT--------------GTGCA---CAGCTGTGTGTGTGTAGGCTGTACATGTGTGTG--CACACGT--GCATATGTGTACCCAAGAC-----CACATGTGCATTCACACACCATTCCAGATGCACACCCACACGGGTGTACACACCCTAAAAG--------------------------Gcacacccacacaggcacatacag---------------ggcaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 60769 197 + 80904711 AGCTCTAGTCAGTTGAGTCT--------------ATGCA---CAGCTCTGTATGTGTAGGCTGCATATGTGTGTGCACACACAT--GCATATGTGTACCCAAGACACACATGCATATGTGTTCACACACCATTCCAGATGCACACCCACACAGGTGTACACACCCTAATAG--------------------------Gcacacccccacaggcacatacaggtgcacacccacacaggcaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 61766 192 + 80997621 AGCTCTAGTCAGTTGAGTCT--------------ATGCA---CAGCTCTGTATGTGTAGGCTGCACATGTGTGTGCACACACAT--GCATATGTGTACCCAAGAC-----CACATATGTGTTCACACACCATTCCAGATGCACACCCACACAGGTGTACACACCCTAATAG--------------------------GCACACCCCCACAGGCACATACAGGTGCACACCCACACAGGCACA i macFas5.chr16 C 0 I 520 s papAnu2.chr16 71971 192 + 74645514 AGCTCTAGTTAGTTGAGTGT--------------ATGCA---CAGCTCTGTATGTGTAGgctgcacatgtgtgtgcacacacat--gcatacgtGTACCCAAGAC-----CACATATGTGTTcacacaccattccagatgcacacccacacaggtgtacacaccctaatag--------------------------gcacacccccacaggcacatacaggtgcacacccacacaggcaca i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 878789 108 - 1291538 AGCTCTAGTCAGT---GTGT--------------GTACA---CG----TCTGTGTGTAGGCTG-----------------------------------------------TACATGTGCGTGCACGTACCACTCTAGATGCACGCTCACACAAG-------AACATAGTGT--------------------------GCAC----------------ACAGATGCTCA-------------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75810195 147 + 122082543 AAGTATGGTGAGATGAGTGTCAAGGGATGGGAAGAGGCACGTCAGGTCTGcatgtgaa---------tgtgtgtaaacacacatgggcacatatgta----------------atataggtacatatagccatatagatgcacatccacacaaatgtgcccac----atag--------------------------gcaca---------------------------------------- i mm10.chr11 I 40 C 0 s canFam3.chr9 15637919 99 - 61074082 --------------------------------------------------------------------ATCTGTGCATGCACAC--CCACACTTGGACATGTGAC-----CGCATGTGCTTAC--------------ATGCTTGTGCACACATCTGCACATACCCATACAA--------------------------ATGCACATTCATGCTCA---------------------------- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 69756 11669 + 75148670 T a score=7244.000000 s hg38.chr17_GL383563v3_alt 136179 12 + 375691 ggtgtacacaca s panTro4.chr17 133887 7 + 82630442 ggtgtac----- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 31555 12 + 73212453 ggtgcacaccca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 92273 12 - 81552678 ggtgtacacaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 60966 12 + 80904711 cgtgtaaacaca i rheMac3.chr16 C 0 I 1064 s macFas5.chr16 62478 12 + 80997621 GTTGTACACACA i macFas5.chr16 I 520 C 0 s papAnu2.chr16 72163 12 + 74645514 cgtgtaaacaca i papAnu2.chr16 C 0 I 26 s calJac3.chrUn_GL286409 878897 9 - 1291538 --TGTGCACAT- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75810342 1 + 122082543 ---g-------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15638018 12 - 61074082 CGTGCACACATG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 69756 11669 + 75148670 T a score=562.000000 s hg38.chr17_GL383563v3_alt 136191 4 + 375691 --caca s ponAbe2.chr17 31567 4 + 73212453 --caca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 92285 4 - 81552678 --gacg i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 62490 4 + 80997621 --CACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 72201 4 + 74645514 --caca i papAnu2.chr16 I 26 I 306 s canFam3.chr9 15638030 4 - 61074082 GCCA-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75810343 0 + 122082543 C e calJac3.chrUn_GL286409 878906 0 - 1291538 C e chlSab2.chr16 69756 11669 + 75148670 T e rheMac3.chr16 60978 1064 + 80904711 I e panTro4.chr17 133894 0 + 82630442 C a score=-19805.000000 s hg38.chr17_GL383563v3_alt 136195 44 + 375691 g------------------------------------ctgtacac--------------------------acacacagctgtaca--------------cacacagctgtacacac--------------act s panTro4.chr17 133894 23 + 82630442 -----------------------------------------------------------------------------------aca--------------cacacagctgtacacac--------------act i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 31571 94 + 73212453 ggcacaggtgtacacacagaggctcatgtgcacatgcacacacac--------------------------acacacagctgtaca--------------cacacagctgtacacgcacacacaGCTGTATACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 92289 54 - 81552678 c----------------------tcatgtgcac----atgcacac--------------------------acacacggctgtaca--------------cacacagctgtacacac--------------act i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 62494 84 + 80997621 ------------------------------------GCTGTACACGCACTCAGTTGTACACACACAGCTGTACACACAGCTGTACACTCACAGTCGTACACACACAGCTGTACATGC--------------ACT i macFas5.chr16 C 0 I 12 s papAnu2.chr16 72511 46 + 74645514 ------------------------------------gctgtacac--------------------------acacacagctgtacact------------cacacagctgtacacgc--------------act i papAnu2.chr16 I 306 I 12 s calJac3.chrUn_GL286409 878906 20 - 1291538 --------------------------------------------------------------------------TACAGC---ACA--------------CACACAGCTGG----------------------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75810343 39 + 122082543 -----------------------------------------acat--------------------------gaactcagctataca--------------cACATTATTCTATAAAC--------------ACT i mm10.chr11 C 0 C 0 s canFam3.chr9 15638034 11 - 61074082 ------------------------------------------------------------------------------------------------CGTGTGCACAG--------------------------- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 69756 11669 + 75148670 T e rheMac3.chr16 60978 1064 + 80904711 I a score=1732809.000000 s hg38.chr17_GL383563v3_alt 136239 651 + 375691 cacacagctgtacacacacTGAAATGACTAGAATTGGTGTTCACAGATCCTGTGTTACTCAGGGT---GAGAATGTCAgtgtgtatgtgtgc--tcatgc--gtgtgt----------------gtgtgt-acatgtgtgtgtagtgGGAGACAGGAGTTCAGTCTTCCAGGGTCCCCTGGTGGCCCATCTGTCAGGGTCCAGATCTGAGAAATGC--TCCATC---AGGGGCAGACCCCTTCTCCGAAAGGCACTCTCAGCCAGGAGGGCCCCATGCCCCACCACCCTCTCTTTATGCTACCAAGTGCTTGCTGAGGTCCTTAGATAAAGTTTCAGGACCTGGAAGACGGAGCTAGGCATGATCTCTGGGGACTTCCTGG----------------------------CCCCGTGTGGCCAC--GTCGAATCCGCTGCTTCTCTTTTCACTGGTCT-GGTGCTTCC-ATCCCCAAAGCTCCTTTCTGC---CCCCCGACTCCTCTGAGTCTACACAGACCTGCAAGGGCCTGTAGGAAC-----------CACACCT----------------------------------------------------------------------------AACAAGCAAC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-GACAGCCAGACAGGGGGActcaccacaggtccacgagcag--gt--------------------------------------------------------------------ctactgc-cattttacagatggggaaactgaggcacagcagccttctgcagggccccgtggct----agagatggact------------ccagattcacacccag s panTro4.chr17 133917 654 + 82630442 cacacagctgtacacacacTGAAATGACTAGAATTGGTGTTCACAGATCCTGTGTTACTCAGGGTGAGGAGAATGTCAgtgtgtatgtgtgc--tcatgc--gtgtgt----------------gtgtgt-acctgtgtgtgtAGTGGGAGACAGGAGTTCAGTCTTCCGGGGTCCCCTGGTGGCCCATCTGTCAGGGTCCAGATCTGAGAAATGC--TCCATC---AGGGGCAGACCCCTTCTCCGAAAGGCAGTCTCAGCCAGGAGGGCCCCATGCCCCACCACCCTCTCTTTATGCTACCAAGTGCCTGCTGAGGTCCTTAGATAAAGTTTCAGGACCTGGAAGACGGAGCTAGGCATGATCTCTGGGGACTTCCTGG----------------------------CCCCGTGTGGCCAC--GTCGAATCCACTGCGTCTCTTTTCACTGGCCT-GGTGCTTCC-ATCCCCAAAGCTCCTTTCTGC---CCCCCGACTCCTCTGAGTCTACACAGACCTGCAAGGGCCTGTAGGAGC-----------CACATCT----------------------------------------------------------------------------AACAAGCAAC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-GAGAGCCAGACAGGGGGActcaccacaggtccacgagcag--gt--------------------------------------------------------------------ctactgc-cattttacagatggggaaactgaggcacagcagccttctgcagggccccgtggct----agagatggact------------cagatttcaaacccag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 31665 651 + 73212453 CACACAGCTGTACACACACTGAAATGACTAGAATTGGTGTTCACAGATCCTGTGTTACTCAGGGTGAGGAAAATGTCACtgtgtatgtgtgc--ttatgcgtgtgtgt----------------gtgtgt-acgtgtgtgtgtgGTAGGAGACAGGAGTTCAATCTTCCGGGGTTCCCTGGTGGCCCATCTGTCAGGGTGCAGATCTGAGAAATGC--TCCATC---AGGGACAGACCCCTTCTCCAAAAGGCACTCTCAGCCAGAAGGGCCCCATGCCCCACCACCCTCTCTTTATGCTACCAAGTACCTGCTGAGGTCCTTAGATAAACTTTCAGGACCTGGAAGACGGAGCTGGGCATGATCTCTGGGGACTGCCTGG----------------------------CCCCGTGTGGCCAC--GTCGAATCCGCCGCGTCTCTTTTCACTGGCCT-GGTGCTTCC-ATCCCCAAAGCTCCTTTCTGC---CCCCCGACTCCTCTGAGTCTACACAGACCTGCAAGGGCCTGTAGGAGC-----------CACATCT----------------------------------------------------------------------------AACAAGCAAC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-GAGAGCCAGACAGGGGGActcaccacaggtccatgagcag--gg------------------------------------------------------------cacagcaactactgc-cattttacagatggggaaactgaggcacagCGGCCTTCTGCAGGGCCCCGTGGCT----AGA-------------------------TTCAAACCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 92343 669 - 81552678 cacacagctgtacacacacTGAAATGACTAGAATTGGTGTTGACAGATCCTGTGTTACTCAGGGTGAGGAGAATGTCAgtgtgtatgtgtgc--tcatgc--gtgtgt----------------gt------------------------------------------------------gtgGCCCATCTGTCAGGGTCCAGATCTGAGCAATGC--TCCATC---AGGGGCAGACGCCTTCTCCGAAAGGCACTCTCAGCCAGGAGGGCCCCAGGCCCCACCACCCTCTCTTTACGCTACCAAGTGCCTGCTGAGGTCCTTAGATAAAGTTTCAGGACCTGGAAGAGGGAGCCGGGCATGATCTCTGGGGACCGCCTGG----------------------------CCCCGTGTGGCCAG--GTGGAATCCGCCGCGTCTCTTCTCACTGGCCT-GGTGCTTCC-ATCCCCAAAGCTCCTTTCTGT---CCCCTGACTCCTCTGAGTCCACACAGACCTGCAAGGGCCTCTGGGAGC-----------CACATCT----------------------------------------------------------------------------AACAAGCAAC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-AACAGCCAGACAGGGGGACTCACCACAGGTCCACGAGCGG--GGTACAGATGGGGAAACTGaggcacagcgactacggccatttcacagatggggaaactgaggcacagCGGCTACGGc-catttcacagatggggaaactgaggcacagcggccttctgcagggccccgtggct----agagatggact------------ccagattcaaacccag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62042 647 + 80904711 cacacagctgtacacacactcaAATGACTAGAATTGGTGTTCACAGGTCCTGTGTTACTCAGGGTGAGGAGAATGTCAgtgtgtatgtgtgc--tcatgc--atgtgtgtatgtgtgcac----gtgtgt-gtgtgtgtgtgtgGTGGGAGACGGGAGTTCAGTCTTCTGGGGTACCCTGGTGGCCCATTTGTCAGGGTCCGGATCTGAGAAATGC--TGCATC----GGGGCAGACCCCTTCTCCAAAAGGCACTCTCAGCCGGGAGGGCCCCATGCCCCACCACCCTCTCTTTGTGCTCCCAAGTGCCTGCTGAGGTCCTTGGATAAAGTTTCAGGAC--------------------------CTGGGGATTGCCTGG----------------------------CCCC-TGTGGCCAGGAGTCGAATCCTCTGCGTCTCTTCTCCCTGACCTGGGTGCTTCC-ATCACCAAAGCTCCTTTCTG----CCCCCAACTCCTCTGAGTCTACACAGACCTGGAAGGGCCTGTAGGAGC-----------CACATCC----------------------------------------------------------------------------AACAAGCACC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-GAGCGTCCGAGA-GGGGcctcaccatacgtccacgagcag--gg------------------------------------------------------------cacggcaaccactta-cattttacagacagggaaactgaggcacggaggccttctgcaggaccccgtggct----ggagatggact------------ccagattcaaacccag i rheMac3.chr16 I 1064 I 12 s macFas5.chr16 62590 651 + 80997621 CACACAGCTGTACACACACTCAAATGACTAGAATTGGTGTTCACAGGTCCTGTGTTACTCAGGGTGAGGAGAATGTCAgtgtgtatgtgtgc--tcatgc--atgtgtgtacgtgtgcacgtgtgtgtgt-gtgtgtgtgtgtggtgGGAGACGGGAGTTCAGTCTTCTGGGGTACCCTGGTGGCCCATTTGTCAGGGTCCGGATCTGAGAAATGC--TGCATC----GGGGCAGACCCCTTCTCCAAAAGGCACTCTCAGCCGGGAGGGCCCCATGCCCCACCACCCTCTCTTTGTGCTCCCAAGTGCCTGCTGAGGTCCTTGGATAAAGTTTCAGGAC--------------------------CTGGGGATTGCCTGG----------------------------CCCC-TGTGGCCAGGAGTCGAATCCTCTGCGTCTCTTCTCCCTGACCTGGGTGCTTCC-ATCACCAAAGCTCCTTTCTG----CCCCCAACTCCTCTGAGTCTACACAGACCTGGAAGGGCCTGTAGGAGC-----------CACATCC----------------------------------------------------------------------------AACAAGCACC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-GAGCGTCCGAGA-GGGGcctcaccatacgtccacgagcag--gg------------------------------------------------------------cacggcaaccactta-cattttacagacagggaaactgaggcacggaggccttctgcaggaccccgtggct----ggagatggact------------ccagattcaaacccag i macFas5.chr16 I 12 I 12 s papAnu2.chr16 72569 642 + 74645514 cacacagctgtacacacacTCAAATGACTAGAATTGGTGTTCACAGGTCCTGTGTTACTCAGGGTGAGGAGAATGTCAgtgtgtacgtgtgc--tcatgc------------------------gtgtgc-acgtgtgtgtgtggtgggagatGGGAGTTCAATCTTCCGGGGTCCCCTGGTGACCCATCTGTCAGGGTCCGGATCTGAGAAATGC--TGCATC----GGGGCAGACCCCTTCTCCAAAAGGCACTCTCAGCCGGGAGGGCCCCATGCCCCATCACCCTCTCTTTGTGCTCCCAAGTGCCTGCTGAGGTCCTTGGATCAAGTTTCAGGAC--------------------------CTGGGGATTGCCTGG----------------------------CCCC-TGTGGCCAGGAGTCGAATCCTCTGCGTCTCTTCTCCCTGACCTGGGTGCTTCC-ATCACCAAAGCTCCTTTCTG----CCCCCAGCTCCTCTGAGTCTACACAGACCTGCAAGGGCCTGTAGGAGC-----------CACATCC----------------------------------------------------------------------------AACAAGCAAC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-GAGTGCCAGAGAGGGGGCCTCACCATACGTCCATGAGCAG--GG------------------------------------------------------------CACGGCAACCactgc-cattttacagatagggaaactgaggcacggaggcCTTCTGCAGGACCCCGTGGCT----GGAGATGGACTccagattcaaacccagattcaaacccag i papAnu2.chr16 I 12 I 12 s chlSab2.chr16 58087 665 + 75148670 CACACAGCTGTACACACCCTCAAATGACTAGAATTGGTGTTCACAGATCCTGTGTTACTCAGGGTGAGGAGAATGTCAgtgtgtacgtgtgc--tcatgc--gtgtgtgtac------------gtgtgc-acgtgtgtgtgtggtgGGAGACGGGAGTTCAGTCTTCCGGGATCCCCTGGTGGCCCATCTGTC-GGGTCCAGATCTGAGAAATGC--TGCATC----GGGGCAGACCGCTTCTCCAAAAGGCACTCTCAGCCGGGAGGGCCCCCTGCCCCACCACCCTCTCTTTGTGCTCCCAAATGCCTGCTGAGGTCCTGAGATAAAGTGTCAGGACCTGAAAGACGGAGCTGGGCAAGATCTCTGGGGACTGCCTGG----------------------------CCCCGTGTGGCCAGGAGTCGAATCCTCCGCGTCTCTTCTCCCTGGCCTGGGTGCTTCC-ATCACCAAAGCTCCTTTCTG----CCCCCAACTCCTCTGAGTCTACACAGACCTGCAAGGGCCTGTAGGAGC-----------CACATCC----------------------------------------------------------------------------AACAAGCAAC--CACAAGCAGCAG-------CCAGTGAGCAGACAC-GAGTGCCAGAGA-GGGGcctcaccatacgtccacgagcag--gg------------------------------------------------------------cacggcaaccactgc-catttcacagacggggaaactgaggcacggaggccttctgcaggaccccgtggct----ggagatggact------------ccagattcaaacccag i chlSab2.chr16 T 11669 I 293 s calJac3.chrUn_GL286409 878926 632 - 1291538 -------------ACACACTGAAATGACTAGAACTGCTGTTCATTGATCCTGTGTTACTCAGGGTGAGGAGAATGTCAGTGTGTATGCGTGC--TTGTGT------------------------CT---------------GTGGTAAGAGATGGGTGTTCAGTCTTTCAGGGTCCCCTGGTGGCCCATCTCTCAGGATCTGGAGCTAAGAAAAGC--TCCATC----AGGGTAGACCCCTTCACCAAAAGGCACTCTCAGCTGGGAGGGCCCCATGCCCCACCAGCCTCTCTTTACACTATCAGGTGCCTGCTGGGGTCCTTAGATAAAGTTTCAGCACCTG-AAGATGGGGCTGGGCATGATCTCTGGGGATTGCCTGG----------------------------CCAGGTACGGCCAGGAGTCGAAGCCACCATATCTCTTCTCACTGGCCTGGATGCTTCC-GTCCCCAAAGCTC---TCTGG---CCCCGGACTCCTCTGAGTCTACACAGACCTGCAAGGACCTATAGAAGC-----------CACATCT----------------------------------------------------------------------------AACAA-CAGCCACACAAGCAGCAG-------GCAGTGAGCAGACAT-GAGTGGCAGACACGGGGcctcaccctaagtccaagagcag--gg------------------------------------------------------------cacagcaactcctgc-catttcacagatggggaaactgaggcacagaggccttctgcagggccctgtggctgatgggggatgggct------------cccgatttgaacccag i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75810382 522 + 122082543 -------------------CAAACTAGTGAGAGTTGGTATTGAGAGCTTCTTTGTTCTTT------------GTGTGTGTGCTTGCATATGC--TTAGGC--ATATGT----------------ATGGATAATGTATGTCTGAGATGGTGGGTGGTAAGTAGGTGAT--GGGGTCCTCTGGTGGAGC-TCTGATAGAGTCTTTACATGAAGGGTGCCTTCCATCTGTGGGGCTGGGCCTC--------------------------AAGGTCCC------------------------------AGCTTCTGCTCAGGTGCTTTG-------------------GAAGCAGAGTTTGGCATGAT--CTCAGGACTGGCTGG----------------------------TTCTACACTCTCAGAAATGGGATCCA--GCAACTCTTC-AGCTGGCCTGCACATTTCC-ACCC-----AGTCCTATCAGTGGACTCTGAACTC-----------CGCAGAGCTGCAGAAGGCTGGAGGGGC-----------CG-AGCT----------------------------------------------------------------------------GAAATGCAAC--CTCAGGCATGG----------AGTGAGCACACAC-A---------------GTCTGCCCTAGAGTCCATGGGGGGTAAG------------------------------------------------------------CGTAGTGATTGCTGCACATGCCAGGATGAGGGAAACTGAGGCACAGAGACA-TCTACAGCATCCTGT---T----CCAGAAAGAGT--------------AGGTTCAAAACCAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15638045 684 - 61074082 --------TGTACACACACTCAGCTGACCAGAGTCAGTGTTCAGAGATCCTCTGGTGCTGAGGG--AAGAGACTGTCAGAGTGCATACATGCATGCAtgc--gtgtgtgtgcatgtgtgtgt--gtgtgt-gcgtgtgtgCATGGTAGGAGAGGGGGTTTCAGC--------------------CCCGCCT------------------------C--TGTACC--------------------------------------------------------CACAGCCCCCTCTT----CTGCCCCATGCCTGCTGAGGACCTTTGTTAAAGTTTCAG-----------CGGAGCCGGGCATGGTCTCTGGAGACTTCCTGGAGCTGCTGGAGCCACAGGGCCAGCCCCACCTTGCACTGCCAGGAGTCCAATCCACCGTGTCTCTGCTCCCTGGCCTGGATGCTTCCTGTCCCCAATGATCATTCCTGT---CCCTGGACTCTTTTGAACATACACAGACCTTCAAGGAACTGTGGGAGCTCATTGAAAAGCAcctctctctgtgctcctccctctgctcatgctctctctctctaataagtaaataaaattaaaaaaaataaaatggtttaaaaacaaaaAAG--AAAGAGCACCAGTAAACATCGAGTGAGCAGGCGCTGTGTGCCAGATATGTGGccttatcataggcccatgaggtg--tg------------------------------------------------------------cgtggtcactgctgc-catt--atagat-gggaaactgaggcatgcaggtctttagcaggatcttacaactaacaagaagagagct------------cttgatgcaaagccag i canFam3.chr9 C 0 C 0 a score=28911.000000 s hg38.chr17_GL383563v3_alt 136890 9 + 375691 gctgtatgt s panTro4.chr17 134571 9 + 82630442 gctgtgtgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32316 7 + 73212453 GCTG--TGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93012 9 - 81552678 gctgtgtgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62701 9 + 80904711 gctgtgtgt i rheMac3.chr16 I 12 C 0 s macFas5.chr16 63253 9 + 80997621 gctgtgtgt i macFas5.chr16 I 12 C 0 s papAnu2.chr16 73223 9 + 74645514 gctgtGTGT i papAnu2.chr16 I 12 C 0 s calJac3.chrUn_GL286409 879558 9 - 1291538 gctgtgtgt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75810904 9 + 122082543 GCTGTGTAT i mm10.chr11 C 0 I 34 s canFam3.chr9 15638729 9 - 61074082 gctgtGTCT i canFam3.chr9 C 0 C 0 e chlSab2.chr16 58752 293 + 75148670 I a score=100801.000000 s hg38.chr17_GL383563v3_alt 136899 58 + 375691 ctgcaCAACTTGGACTGCACAACCCAGCACAGAGAACACTC-----GACCCCCGCTCACGCAA s panTro4.chr17 134580 58 + 82630442 ctgcacaacttggactGCACAACCCAGCACAGAGAACACTC-----GACCCCCGCTCACGCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32323 58 + 73212453 CTGCACAACTTGGACTGCACAACCCAGCACAGAGAACACCC-----GATCCCCGCTCACGCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93021 58 - 81552678 ctgcacaacttggactGCACAACCCAGCACAGAGAACACTC-----GACCCCCGCTCACGCAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62710 62 + 80904711 ctgcacaacttggactgcacaa-ccaGCACAGAGAACACTCGAACCGAACCCAGCTCACGCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63262 62 + 80997621 ctgcacaacttggactgcacaa-ccaGCACAGAGAACACTCGAACCGAACCCAGCTCACGCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73232 62 + 74645514 CTGCACAACTTGGACTGCACAA-CCAGCACAGAGAACACTCGAACTGAACCCAGCTCACGCAA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879567 40 - 1291538 t-----------gactgtacaa-----cccAGAGAACACTC------AAGCCCGCTCAGGCA- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15638738 43 - 61074082 --------------CTGCTCTGGCTGGC-TGGGGAACAGCC-----AGCCCCATGCCATGCAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e chlSab2.chr16 58752 293 + 75148670 I a score=4809.000000 s hg38.chr17_GL383563v3_alt 136957 3 + 375691 CAC s panTro4.chr17 134638 3 + 82630442 CAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93079 3 - 81552678 CAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62772 3 + 80904711 CAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63324 3 + 80997621 CAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73294 3 + 74645514 CAC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879607 2 - 1291538 -GC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15638781 3 - 61074082 CAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=45252.000000 s hg38.chr17_GL383563v3_alt 136960 29 + 375691 AGCAGGATCCCGAGCTTGGAACCCAGGTG s panTro4.chr17 134641 29 + 82630442 AGCAGGATCCCGAGCTTGGAACCCAGGTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93082 29 - 81552678 AGCAGGATCCCGACCCCAGAACCCAGGCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62775 29 + 80904711 AGCGGGATCCCGACCCCGGAACCCAGGCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63327 29 + 80997621 AGCGGGATCCCGACCCCGGAACCCAGGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73297 29 + 74645514 AGCGGGATCCCGACCCCGGAACCCGGGCG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879609 29 - 1291538 AGCAACATCCTGGCCTCGGAACCCAGGAG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=100466.000000 s hg38.chr17_GL383563v3_alt 136989 96 + 375691 TTCACAAAGGGGTCCCGACTCTGGAACCCAGGCCTCCACAGCAGGATCCCGACCCTGGAACCCAGGCGTCCACAGCAGGATCCCGAGCTTGGAACC s panTro4.chr17 134670 96 + 82630442 TTCACAGAGGGGTCCCGAATCTGGAACCCAGGTGTTCACAGAGGGATCCCAACCCTGGAACCCAGACGTCCACAGCAGGATCCCGAGTTTGGAACC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93111 96 - 81552678 TCCACAGCAGATTCCCGACCCCAGAACCCAGGCGTCCACAGCAGGACCCCGACTCCGGAACCAAGGTGTCCACAGCAGGATCCCGAGTTTGGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62804 96 + 80904711 TCCTCGGCGGGATCCCGACCCCGGAACCCAGGCGTCCTCGGCGGGATCCCGACCCCGGAACCCAGGCGTCCTCGGCGGGATCCCGACCCCGGAACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63356 96 + 80997621 TCCTCGGCGGGATCCCGACCCCGGAACCCAGGTGTCCTCGGCGGGATCCTGACCCCGGAACCCAGGCGTTCACAGCGGGATCCCGACCTCGGAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73326 96 + 74645514 TCCTCGGTGGGATCCCGACCCCAGAACCCAGGTGTTCACAGCGGGATCTCGACCCTGGAACCCAGGCGTCCTCGGCAGGATCCCCACCCTGGAACC i papAnu2.chr16 C 0 T 68 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=46584.000000 s hg38.chr17_GL383563v3_alt 137085 40 + 375691 CAGGCGTTCACAGCAGGATCCCGACCCTGGAACCCAGGCG s panTro4.chr17 134766 40 + 82630442 CAGGCGTCCACAGCAGGATCCCGACCCTGGAACCCAGGCG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93207 40 - 81552678 CAGGCGTCCACAGCAGGATCCCGAGTTTGGAACCCAGGCG i nomLeu3.chr19 C 0 T 68 s rheMac3.chr16 62900 40 + 80904711 CAGGCGTCCTCGGCGGGATCCCGACCCCGGAACCCAGGCG i rheMac3.chr16 C 0 T 136 s macFas5.chr16 63452 40 + 80997621 CGGGTGTCCTCGGCGGGATCCCGACCCCGGAACCCGGGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73354 40 + 74645514 CAGGTGTTCACAGCGGGATCTCGACCCTGGAACCCAGGCG i papAnu2.chr16 T 68 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=28652.000000 s hg38.chr17_GL383563v3_alt 137125 28 + 375691 TCCACAGCAGGATCCCGAGTTTGGAACC s panTro4.chr17 134806 28 + 82630442 TCCACAGCAGGATCCCGAGTTTGGAATC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93179 28 - 81552678 TCCACAGCAGGATCCCGAGTTTGGAACC i nomLeu3.chr19 T 68 C 0 s rheMac3.chr16 62804 28 + 80904711 TCCTCGGCGGGATCCCGACCCCGGAACC i rheMac3.chr16 T 136 C 0 s macFas5.chr16 63492 28 + 80997621 TTCACAGCGGGATCCCAACCCCGGAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73394 28 + 74645514 TCCTCGGCAGGATCCCCACCCTGGAACC i papAnu2.chr16 C 0 T 102 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=81277.000000 s hg38.chr17_GL383563v3_alt 137153 74 + 375691 CAGGCGTTCACAGCAGGATCCCGAGCTTGGAACCCAGGTGTTCACAGCAGGTTCCCGAGCTTGGAACCCAGGCA s panTro4.chr17 134834 74 + 82630442 CAGGCGTCCACAGCAGGATCCCGAGCTTGGAACCCAGGCGTCCACAGCAGGATCCCGACCCTGGAACCCAGGCG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93207 74 - 81552678 CAGGCGTCCACAGCAGGATCCCGAGTTTGGAACCCAGGCGTCCACAGCAGGATCCCAACCCCGGAACCCAGGCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62832 74 + 80904711 CAGGCGTCCTCGGCGGGATCCCGACCCCGGAACCCAGGCGTCCTCGGCGGGATCCCGACCCCGGAACCCAGGCG i rheMac3.chr16 C 0 I 34 s macFas5.chr16 63520 74 + 80997621 CAGGCGTTCACAGCGGGATCCCGACCCCAGAACCCAGGCGTCCTCGGCGGGATCCCGACCCCAGAACCAAAGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73320 74 + 74645514 CGGGCGTCCTCGGTGGGATCCCGACCCCAGAACCCAGGTGTTCACAGCGGGATCTCGACCCTGGAACCCAGGCG i papAnu2.chr16 T 102 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=2210.000000 s hg38.chr17_GL383563v3_alt 137227 2 + 375691 TC s panTro4.chr17 134908 2 + 82630442 TC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93281 2 - 81552678 TT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62940 2 + 80904711 TC i rheMac3.chr16 I 34 C 0 s macFas5.chr16 63594 2 + 80997621 TC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73394 2 + 74645514 TC i papAnu2.chr16 C 0 T 102 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=1500.000000 s hg38.chr17_GL383563v3_alt 137229 1 + 375691 C s panTro4.chr17 134910 1 + 82630442 C i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93283 1 - 81552678 C i nomLeu3.chr19 C 0 T 34 s rheMac3.chr16 62942 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63596 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73294 1 + 74645514 C i papAnu2.chr16 T 102 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=29171.000000 s hg38.chr17_GL383563v3_alt 137230 25 + 375691 ACAGCAGGATCCCGACCCTGGAACC s panTro4.chr17 134911 25 + 82630442 ACAGCAGGATCCCGACCCTGGAACC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93250 25 - 81552678 ACAGCAGGATCCCAACCCCGGAACC i nomLeu3.chr19 T 34 C 0 s rheMac3.chr16 62943 25 + 80904711 TCGGCGGGATCCCGACCCCGGAACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63597 25 + 80997621 TCGGTGGGATCCCCACCCTGGAACC i macFas5.chr16 C 0 T 272 s papAnu2.chr16 73295 25 + 74645514 ACAGCGGGATCCCGACCCCGGAACC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=11608.000000 s hg38.chr17_GL383563v3_alt 137255 9 + 375691 CGGGCGTCC s panTro4.chr17 134936 9 + 82630442 CAGGCGTCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93275 9 - 81552678 CAGGCGTTC i nomLeu3.chr19 C 0 T 102 s rheMac3.chr16 62968 9 + 80904711 CAGGCGTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63350 9 + 80997621 CAGGCGTCC i macFas5.chr16 T 272 C 0 s papAnu2.chr16 73320 9 + 74645514 CGGGCGTCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=35226.000000 s hg38.chr17_GL383563v3_alt 137264 33 + 375691 ACAGCAGGATCCCGAGCTTGGAACCCGGGTGTC s panTro4.chr17 134945 33 + 82630442 ACAGCAGGATCCCGACCCTGGAACCCAGGCGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93182 33 - 81552678 ACAGCAGGATCCCGAGTTTGGAACCCAGGCGTC i nomLeu3.chr19 T 102 C 0 s rheMac3.chr16 62977 33 + 80904711 TCGGCGGGATCCCGACCCCGGAACCCGGGCGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63359 33 + 80997621 TCGGCGGGATCCCGACCCCGGAACCCAGGTGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73329 33 + 74645514 TCGGTGGGATCCCGACCCCAGAACCCAGGTGTT i papAnu2.chr16 C 0 T 68 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=38399.000000 s hg38.chr17_GL383563v3_alt 137297 34 + 375691 CACAGCAGGATCCTGAGCTTGGAACCCGGGCGTC s panTro4.chr17 134978 34 + 82630442 CACAGCAGGATCCCGACCCTGGAACCCAGGCGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93215 34 - 81552678 CACAGCAGGATCCCGAGTTTGGAACCCAGGCGTC i nomLeu3.chr19 C 0 T 170 s rheMac3.chr16 63010 34 + 80904711 CTCGGCGGGATCCCGACCCCGGAACCCGGGCGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63392 34 + 80997621 CTCGGCGGGATCCTGACCCCGGAACCCAGGCGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73294 34 + 74645514 CACAGCGGGATCCCGACCCCGGAACCCGGGCGTC i papAnu2.chr16 T 68 T 34 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=42955.000000 s hg38.chr17_GL383563v3_alt 137331 34 + 375691 CACAGCAGGATCCCGACCCTGGAACCCGGGCGTC s panTro4.chr17 135012 34 + 82630442 CACAGCAGGATCCCGACCCTGGAACCCAGGCGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93079 34 - 81552678 CACAGCAGGATCCCGACCCCAGAACCCAGGCGTC i nomLeu3.chr19 T 170 T 34 s rheMac3.chr16 63044 34 + 80904711 CTCGGCGGGATCCCGACCCCGGAACCCGGGCGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63426 34 + 80997621 CACAGCGGGATCCCGACCTCGGAACCCGGGTGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73294 34 + 74645514 CACAGCGGGATCCCGACCCCGGAACCCGGGCGTC i papAnu2.chr16 T 34 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=39628.000000 s hg38.chr17_GL383563v3_alt 137365 34 + 375691 CACAGCAGGATCCCGACCCTGGAACCCGGGCGTC s panTro4.chr17 135046 34 + 82630442 CACAGCAGGATCCCGACCCTGGAACCCAGGCGTC i panTro4.chr17 C 0 T 68 s nomLeu3.chr19 93079 34 - 81552678 CACAGCAGGATCCCGACCCCAGAACCCAGGCGTC i nomLeu3.chr19 T 34 C 0 s rheMac3.chr16 63078 34 + 80904711 CTCGGCGGGATCCCGACCCCGGAACCCGGGCGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63460 34 + 80997621 CTCGGCGGGATCCCGACCCCGGAACCCGGGTGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73328 34 + 74645514 CTCGGTGGGATCCCGACCCCAGAACCCAGGTGTT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=29871.000000 s hg38.chr17_GL383563v3_alt 137399 26 + 375691 CACAGCAGGATCCCGACCCTGGAACC s panTro4.chr17 135012 26 + 82630442 CACAGCAGGATCCCGACCCTGGAACC i panTro4.chr17 T 68 C 0 s nomLeu3.chr19 93113 26 - 81552678 CACAGCAGATTCCCGACCCCAGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63112 26 + 80904711 CTCGGCGGGATCCCGACCCCAGAACC i rheMac3.chr16 C 0 T 146 s macFas5.chr16 63494 26 + 80997621 CACAGCGGGATCCCAACCCCGGAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73362 26 + 74645514 CACAGCGGGATCTCGACCCTGGAACC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e ponAbe2.chr17 32381 0 + 73212453 C a score=6808.000000 s hg38.chr17_GL383563v3_alt 137425 8 + 375691 CGGGCGTC s panTro4.chr17 135038 8 + 82630442 CAGGCGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 93139 8 - 81552678 CAGGCGTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 63520 8 + 80997621 CAGGCGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73388 8 + 74645514 CAGGCGTC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e rheMac3.chr16 63138 146 + 80904711 T e ponAbe2.chr17 32381 0 + 73212453 C a score=19165.000000 s hg38.chr17_GL383563v3_alt 137433 16 + 375691 CACAGCAGGATCCCGA s panTro4.chr17 135046 16 + 82630442 CACAGCAGGATCCCGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32381 16 + 73212453 CACAGCAGGATCCCGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93147 16 - 81552678 CACAGCAGGACCCCGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 63528 16 + 80997621 CACAGCGGGATCCCGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73396 16 + 74645514 CTCGGCAGGATCCCCA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e rheMac3.chr16 63138 146 + 80904711 T a score=15174.000000 s hg38.chr17_GL383563v3_alt 137449 10 + 375691 GCCTGGAACC s panTro4.chr17 135062 10 + 82630442 CCCTGGAACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32397 10 + 73212453 GCCTGGAACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93163 10 - 81552678 CTCCGGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 62992 10 + 80904711 CCCCGGAACC i rheMac3.chr16 T 146 C 0 s macFas5.chr16 63544 10 + 80997621 CCCCAGAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73412 10 + 74645514 CCCTGGAACC i papAnu2.chr16 C 0 T 34 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=50260.000000 s hg38.chr17_GL383563v3_alt 137459 34 + 375691 CAGGCGTTCACAGCAGGATCCCGAGTTTGGAACC s panTro4.chr17 135072 34 + 82630442 CAGGCGTCCACAGCAGGATCCCGAGTTTGGAATC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32407 34 + 73212453 CAGGCGTCCACAGCGGGATCCCGAGCCTGGAACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93173 34 - 81552678 AAGGTGTCCACAGCAGGATCCCGAGTTTGGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63002 34 + 80904711 CGGGCGTCCTCGGCGGGATCCCGACCCCGGAACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63554 34 + 80997621 CAGGCGTCCTCGGCGGGATCCCGACCCCAGAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73388 34 + 74645514 CAGGCGTCCTCGGCAGGATCCCCACCCTGGAACC i papAnu2.chr16 T 34 T 34 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=48353.000000 s hg38.chr17_GL383563v3_alt 137493 33 + 375691 CGGGCGTCCACAGCAGGATCCCGAGCTTGGAAC s panTro4.chr17 135106 33 + 82630442 CAGGTGTCCACAGCAGGATCCCGACCCTGGAAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32441 33 + 73212453 CAGGCGTCCACAGCGGGATCCCGAGCCTGGAAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93207 33 - 81552678 CAGGCGTCCACAGCAGGATCCCGAGTTTGGAAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63036 33 + 80904711 CGGGCGTCCTCGGCGGGATCCCGACCCCGGAAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63588 33 + 80997621 AAAGCATCCTCGGTGGGATCCCCACCCTGGAAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73388 33 + 74645514 CAGGCGTCCTCGGCAGGATCCCCACCCTGGAAC i papAnu2.chr16 T 34 T 68 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=2100.000000 s hg38.chr17_GL383563v3_alt 137526 1 + 375691 C s panTro4.chr17 135139 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32474 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93240 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63069 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63621 1 + 80997621 C i macFas5.chr16 C 0 T 34 s papAnu2.chr16 73353 1 + 74645514 C i papAnu2.chr16 T 68 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=50774.000000 s hg38.chr17_GL383563v3_alt 137527 34 + 375691 CAGGCGTTCACAGCAGGATCCCGACCCTGGAACC s panTro4.chr17 135140 34 + 82630442 CAGGCGTTCACAGCAGGATCCCGAGCTTGGAACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32475 34 + 73212453 CAGGCGTCCACAGCGGGATCCCGAGCCTGGAACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93241 34 - 81552678 CAGGCGTCCACAGCAGGATCCCAACCCCGGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63070 34 + 80904711 CGGGCGTCCTCGGCGGGATCCCGACCCCGGAACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63588 34 + 80997621 AAAGCATCCTCGGTGGGATCCCCACCCTGGAACC i macFas5.chr16 T 34 T 102 s papAnu2.chr16 73354 34 + 74645514 CAGGTGTTCACAGCGGGATCTCGACCCTGGAACC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=9579.000000 s hg38.chr17_GL383563v3_alt 137561 5 + 375691 CAGGC s panTro4.chr17 135174 5 + 82630442 CAGGC i panTro4.chr17 C 0 T 102 s ponAbe2.chr17 32509 5 + 73212453 CAGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93275 5 - 81552678 CAGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63104 5 + 80904711 CGGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63520 5 + 80997621 CAGGC i macFas5.chr16 T 102 C 0 s papAnu2.chr16 73388 5 + 74645514 CAGGC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=6892.000000 s hg38.chr17_GL383563v3_alt 137566 4 + 375691 GTCC s panTro4.chr17 135077 4 + 82630442 GTCC i panTro4.chr17 T 102 C 0 s ponAbe2.chr17 32514 4 + 73212453 GTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93280 4 - 81552678 GTTC i nomLeu3.chr19 C 0 T 136 s rheMac3.chr16 63109 4 + 80904711 GTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63525 4 + 80997621 GTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73393 4 + 74645514 GTCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=23496.000000 s hg38.chr17_GL383563v3_alt 137570 15 + 375691 ACAGCAGGATCCCGA s panTro4.chr17 135081 15 + 82630442 ACAGCAGGATCCCGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32518 15 + 73212453 ACAGCGGGATCCCGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93148 15 - 81552678 ACAGCAGGACCCCGA i nomLeu3.chr19 T 136 C 0 s rheMac3.chr16 63113 15 + 80904711 TCGGCGGGATCCCGA i rheMac3.chr16 C 0 T 102 s macFas5.chr16 63529 15 + 80997621 ACAGCGGGATCCCGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73397 15 + 74645514 TCGGCAGGATCCCCA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=11806.000000 s hg38.chr17_GL383563v3_alt 137585 10 + 375691 GTTTGGAACC s panTro4.chr17 135096 10 + 82630442 GTTTGGAATC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32533 10 + 73212453 GCCTGGAACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93163 10 - 81552678 CTCCGGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63026 10 + 80904711 CCCCGGAACC i rheMac3.chr16 T 102 C 0 s macFas5.chr16 63544 10 + 80997621 CCCCAGAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73412 10 + 74645514 CCCTGGAACC i papAnu2.chr16 C 0 T 68 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=62740.000000 s hg38.chr17_GL383563v3_alt 137595 42 + 375691 CAGGTGTTCACAGCAGGATCCCGAGCTTGGAACCCAGACGTT s panTro4.chr17 135106 42 + 82630442 CAGGTGTCCACAGCAGGATCCCGACCCTGGAACCCAGGCGTT i panTro4.chr17 C 0 T 68 s ponAbe2.chr17 32543 42 + 73212453 CAGGCGTCCACAGCGGGATCCCGAGCCTGGAACCCAGGCGTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93173 42 - 81552678 AAGGTGTCCACAGCAGGATCCCGAGTTTGGAACCCAGGCGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63036 42 + 80904711 CGGGCGTCCTCGGCGGGATCCCGACCCCGGAACCCGGGCGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63554 42 + 80997621 CAGGCGTCCTCGGCGGGATCCCGACCCCAGAACCAAAGCATC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73354 42 + 74645514 CAGGTGTTCACAGCGGGATCTCGACCCTGGAACCCAGGCGTC i papAnu2.chr16 T 68 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=37285.000000 s hg38.chr17_GL383563v3_alt 137637 26 + 375691 CACAGCAGGATCCCGAGCTTGGAACC s panTro4.chr17 135080 26 + 82630442 CACAGCAGGATCCCGAGTTTGGAATC i panTro4.chr17 T 68 C 0 s ponAbe2.chr17 32585 26 + 73212453 CACAGCGGGATCCCGAGCCTGGAACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93215 26 - 81552678 CACAGCAGGATCCCGAGTTTGGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63078 26 + 80904711 CTCGGCGGGATCCCGACCCCGGAACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63596 26 + 80997621 CTCGGTGGGATCCCCACCCTGGAACC i macFas5.chr16 C 0 I 113 s papAnu2.chr16 73396 26 + 74645514 CTCGGCAGGATCCCCACCCTGGAACC i papAnu2.chr16 C 0 I 113 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=3422.000000 s hg38.chr17_GL383563v3_alt 137663 4 + 375691 CAGG s panTro4.chr17 135106 4 + 82630442 CAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32611 4 + 73212453 CAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93241 4 - 81552678 CAGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63104 4 + 80904711 CGGG i rheMac3.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e papAnu2.chr16 73422 113 + 74645514 I e macFas5.chr16 63622 113 + 80997621 I a score=39739.000000 s hg38.chr17_GL383563v3_alt 137667 23 + 375691 TGTTCACAGCAGGATCCCGACCC s panTro4.chr17 135110 23 + 82630442 TGTCCACAGCAGGATCCCGACCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32615 23 + 73212453 CGTCCACAGCGGGATCCCGACCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93245 23 - 81552678 CGTCCACAGCAGGATCCCAACCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63108 23 + 80904711 CGTCCTCGGCGGGATCCCGACCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63735 23 + 80997621 TGTTCACAGCAGGATCCCGACCC i macFas5.chr16 I 113 T 177 s papAnu2.chr16 73535 23 + 74645514 TGTTCACAGCAGGATCCCGACCC i papAnu2.chr16 I 113 T 177 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=11377.000000 s hg38.chr17_GL383563v3_alt 137690 7 + 375691 TGGAACC s panTro4.chr17 135133 7 + 82630442 TGGAACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32638 7 + 73212453 TGGAACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93268 7 - 81552678 CGGAACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63131 7 + 80904711 CAGAACC i rheMac3.chr16 C 0 I 151 s macFas5.chr16 63581 7 + 80997621 CAGAACC i macFas5.chr16 T 177 C 0 s papAnu2.chr16 73381 7 + 74645514 TGGAACC i papAnu2.chr16 T 177 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I a score=5428.000000 s hg38.chr17_GL383563v3_alt 137697 6 + 375691 CAGACA s panTro4.chr17 135140 6 + 82630442 CAGGCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32645 6 + 73212453 CAGGCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93275 6 - 81552678 CAGGCG i nomLeu3.chr19 C 0 T 34 s macFas5.chr16 63588 6 + 80997621 AAAGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73388 6 + 74645514 CAGGCG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e rheMac3.chr16 63138 151 + 80904711 I a score=2210.000000 s hg38.chr17_GL383563v3_alt 137703 2 + 375691 TC s panTro4.chr17 135146 2 + 82630442 TT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32651 2 + 73212453 TC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93247 2 - 81552678 TC i nomLeu3.chr19 T 34 C 0 s macFas5.chr16 63594 2 + 80997621 TC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73394 2 + 74645514 TC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e canFam3.chr9 15638784 0 - 61074082 C e calJac3.chrUn_GL286409 879638 0 - 1291538 C e chlSab2.chr16 58752 293 + 75148670 I e rheMac3.chr16 63138 151 + 80904711 I a score=20528.000000 s hg38.chr17_GL383563v3_alt 137705 9 + 375691 CACAGCAGG s panTro4.chr17 135148 9 + 82630442 CACAGCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32653 9 + 73212453 CACAGCGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93249 9 - 81552678 CACAGCAGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63289 9 + 80904711 CACAGCAGG i rheMac3.chr16 I 151 C 0 s macFas5.chr16 63596 9 + 80997621 CTCGGTGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73396 9 + 74645514 CTCGGCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 59045 9 + 75148670 CACAGCAGG i chlSab2.chr16 I 293 C 0 s canFam3.chr9 15638784 9 - 61074082 CACAGGAGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75810913 34 + 122082543 I e calJac3.chrUn_GL286409 879638 0 - 1291538 C a score=21278.000000 s hg38.chr17_GL383563v3_alt 137714 10 + 375691 -ATCCCAAGCT s panTro4.chr17 135157 10 + 82630442 -ATCCCGAGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32662 10 + 73212453 -ATCCCGAGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93258 10 - 81552678 -ATCCCAACCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63298 10 + 80904711 -ATCCCGACCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63605 10 + 80997621 -ATCCCCACCC i macFas5.chr16 C 0 I 143 s papAnu2.chr16 73405 10 + 74645514 -ATCCCCACCC i papAnu2.chr16 C 0 I 143 s chlSab2.chr16 59054 10 + 75148670 -ATCCCGACCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75810947 10 + 122082543 -ATCCCAAGCC i mm10.chr11 I 34 C 0 s canFam3.chr9 15638793 10 - 61074082 TGCCCTGGGC- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 879638 0 - 1291538 C a score=42825.000000 s hg38.chr17_GL383563v3_alt 137724 13 + 375691 TGGAACCCAGGCA s panTro4.chr17 135167 13 + 82630442 TGGAACCCAGGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32672 13 + 73212453 TGGAATCCAGGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93268 13 - 81552678 CGGAACCCAGGCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63308 13 + 80904711 TGGAACCCAGGCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63758 13 + 80997621 TGGAACCCAGGCG i macFas5.chr16 I 143 C 0 s papAnu2.chr16 73558 13 + 74645514 TGGAACCCAGGCG i papAnu2.chr16 I 143 C 0 s chlSab2.chr16 59064 13 + 75148670 TGGAACCCAGGCG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75810957 13 + 122082543 TGGAACCCAGGAA i mm10.chr11 C 0 C 0 s canFam3.chr9 15638803 13 - 61074082 CCAGACCCAGGAG i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 879638 0 - 1291538 C a score=465837.000000 s hg38.chr17_GL383563v3_alt 137737 145 + 375691 TTCTAGTATCCAGCCTCCAAGTCTTGGTCCTACCC-TGGTGGTTTACAGAAGCCGAGAAGCT--------GAC-------------AGCtttactcacccatgacaaaataagaaaagcacagggcaatgtaggaagtttttcataaagttaaatccc--------------------tttaattta s panTro4.chr17 135180 145 + 82630442 TTCTAGTATCCGGCCTCCAAGTCTTGGTCCTACCC-TGGTGGTTTACAGAAGCCGACAAGCT--------GAC-------------AGCtttactcacccatgacaaaataagaaaagcacagggcaatgtaggaagtttttcataaagttaaatccc--------------------tttaattaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32685 145 + 73212453 TTCTAGTATCCGGCCTCCAAGTCTTGGTCCTACCC-TGGTGGTTTACAGGAGCCGAGAAGCT--------GAC-------------AGCtttactcacccaggacaaaataagaaaagcacagagcaatgtaggaagtttttcgtaaagttaaatccc--------------------tttaattaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93281 145 - 81552678 TTCTAGTATCCAGCCTCCAAGTCTCAGTCCTACCC-TCGTGGTTTGCAGAAGCCGAGAAGCT--------GAC-------------CGCtttactcacccatgacaaaataagaaaagcacagggcaatgtaggaagtttttcataaagttaaatccc--------------------tttaattaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63321 145 + 80904711 TTCTAGTATCCGGCCTCCAAGTATTGGTCCTACCC-TGGTGGTTTACAGCAGCTGAGAAGCT--------GAC-------------GGCtttactcacccatgacaaaataagacaagcagagggtaatgtaggaagtttttcagaaagttaaatccc--------------------tttaattaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63771 145 + 80997621 TTCTAGTATCCGGCCTCCAAGTATTGGTCCTACCC-TGGTGGTTTACAGCAGCTGAGAAGCT--------GAC-------------GGCtttactcacccatgacaaaataagacaagcagagggtaatgtaggaagtttttcagaaagttaaatccc--------------------tttaattaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73571 145 + 74645514 TTCTAGTATCCGGCCTCCAAGTATTGTTCCTACCC-TGGTGGTTTACAGCAGCTGAGAAGCT--------GAC-------------GGCTTTACTCACCCATGACAAAATAAGACAAGCAGAGGGTAATGtaggaagtttttcagaaaggtaAATCcc--------------------tttaattaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 59077 145 + 75148670 TTCTAGTATCCGGCCTCCAAGTATTGGTCCTACCC-TGGTGGTTTACAGAAGCTGAGAAGCT--------GAC-------------AGCtttactcacccatgacaaaataagacaagcagagggtaatgtaggaagttttccagaaagttaaatccc--------------------tttaattaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879638 143 - 1291538 TTCTAGGGTCCAGCCTCAGAGTCTTGGTCCGGCCC-TGGTGGTTTACAGAAGCCAAGACGCT--------GAC-------------AGCTTTTCTCACCTACAACAAAATGGGGAAGGCAGAGGGCAATGT-GGGAGTGTTTCCTAAAGTTAAAT-CC--------------------TTTCATTAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75810970 128 + 122082543 TTCCGGCATCTGGTTCCCAAGGCACGGTTCTGCCCAGGGAGGTTGGGCCAAGCTGACAGGGTTCTGATGAGAC-------------CTTGTCACTCGACCCAGATGCAGGTGCAAAAGCATAGGAAAGTGGAGCA----------------------------------------------CATTAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15638816 177 - 61074082 TTCTGGCATCTAGCTCCCAAGTCTTGGTCCTGCC--TGgtggtttgcaaaggctaggaagct--------gacgggtcgtgacgaaggctttgcccagccatggtaaaagaggaaaagcagaggacaacatagtaaattttaaacaaggttaaatCCCCCCCGCCtcttttttttagattttattta i canFam3.chr9 C 0 I 145 a score=121206.000000 s hg38.chr17_GL383563v3_alt 137882 49 + 375691 aaaaaAAA-----CAGCTTTTTTG-GTTGACTTTTCCCCTCTCTTTTCTAAAATA s panTro4.chr17 135325 53 + 82630442 aaaaaAAA--AAACAGCTTTTTTTTGTTGACTTTTCCCCTCTCTTTTCTAAAATA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32830 50 + 73212453 aaaaaAAA-----AAATCCTTTTTTGTTGACTTTTCCCCTCTCTTTTCTAAAATA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93426 54 - 81552678 aaaaaAAAAAAAACAGCCTTTTTT-GTTGACTTTTCCCCTCTCTTTTCTAAAATA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63466 52 + 80904711 agcaaaac-aaaacagctttttt--gttgacttttcccctttcttttctaaaata i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63916 52 + 80997621 agcaaaac-aaaacagctttttt--gttgacttttcccctttcttttctaaaata i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73716 52 + 74645514 aacaaaac-aaaacagccttttt--gttgacttttcccctttcttttctaaaata i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 59222 52 + 75148670 aacaaaac-aaaacagccttttt--gttgacttttcccctttcttttctaaaata i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879781 49 - 1291538 AAAACAAC----ACAGCCTTTTT--GTTGACTTTCCCCCTTCCCTTTCTAAAATA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75811098 48 + 122082543 AGACTAAG----ACAGCCGTTTTC-ACAAATTGATCCCCTT--TTCCCTGAAATG i mm10.chr11 C 0 C 0 e canFam3.chr9 15638993 145 - 61074082 I a score=150106.000000 s hg38.chr17_GL383563v3_alt 137931 38 + 375691 AGGGTGATCTTATCCAATGGTTCTTATTTTATATTCTT s panTro4.chr17 135378 38 + 82630442 AGGGTGATCTTATCCAATGGTTCTTATTTTATATTCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32880 38 + 73212453 AGGGTGATCTTATCCAATGGTTATTATTTTATATTCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93480 38 - 81552678 AGGGTGATCTTATCCAGTGGTTAATATTTTACATTCTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63518 38 + 80904711 agggtgatcttatccaatggttattattttatattctt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 63968 38 + 80997621 agggtgatcttatccaatggttattattttatattctt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73768 38 + 74645514 aggGTGATCTTATCCAAtggttattattttatattctt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 59274 38 + 75148670 agggtgatcttatccaatggttattattttatattctt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879830 38 - 1291538 AGGGTGATCTTGTACAATGCTTATTACTTTGTATTCTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75811146 37 + 122082543 AGATTGGCTTTATATA-TAGTTATGGTTTTATATTCTT i mm10.chr11 C 0 I 735 s canFam3.chr9 15639138 38 - 61074082 AGAGTGATCTTCTACAGTGGTTATGAtttgatattctt i canFam3.chr9 I 145 C 0 a score=362649.000000 s hg38.chr17_GL383563v3_alt 137969 118 + 375691 AATTTAGCAAGATAAAAATGTGAGCAGCTGCACGCCAGCCCCCAAACTCTAGGGGAGG-TTTTTCTGGTTCA--GACTGTCT-CAGGTTCGAGCCTCCTTAGGGCA-CCCCCTTTCCGTCCAC s panTro4.chr17 135416 120 + 82630442 AATTTAGCAAGATAAAAATGTGAGCAGCTGCACGCCAGCCCCCAAACTCTAGGGGAGG-TTTTTCTGGTTCACAGACTGTCT-CAGGTTCGAGCCTCCTTAGGGCA-CCCCCTTTCCGTCCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 32918 120 + 73212453 AATTTAGCAAGATAAAAATGTGAGCAGCTGCACGGCAGCCCCCAAACTCTAGGGGAGG-TTTTTCTGGTTTATAGACTGTCT-CAGGTTCGAGCCTCCTTAGGGCA-CCCCCTTTCCGTCCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93518 120 - 81552678 AATTTAGCAAGATAAAAATGTGAGCAGCTGTACACCAGCCCCCAAACTCTAGGGGAGG-TTTTTCTGGTTCACAGACTGTCT-CAGGTTCGAGCCTCCTCAGGGCT-CCCCCTTTCCGTCCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63556 120 + 80904711 aatttggcaagataaaaatgtgagcagctgcacgccagcccccaaa-tGTAGGGGAGG-TTTTTCTGGTTTACAGACTGTCT-CAGGTTCGAGCCTCCTTGCGGCACCCCCCCTTCCATCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 64006 120 + 80997621 aatttggcaagataaaaatgtgagcagctgcacgccagcccccaaa-tGTAGGGGAGG-TTTTTCTGGTTTACAGACTGTCT-CAGGTTCGAGCCTCCTTGCGGCACCCCCCCTTCCATCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73806 120 + 74645514 aatttggCAAGATAAAAATGTGAGCAGCTGCACGCCAGCCCCCAAA-TGTAGGGGAGG-TTTTTCTGGTTTACAGACTGTCT-CAGGTTCGAGCCTCCTTGCGGCATCCCCCCTTCCATCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 59312 119 + 75148670 aatttagcaagataaaaatgtgagcagctgcacgccagcccgcaaa-tGTAGGGGAGG-TTTTTCTGGTTTACCGACTGTCT-CAGGTTTGAGCCTCCTTGCGGCA-ACCCCCTTCCATCCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879868 120 - 1291538 AATTTAGCAAGATAAACATGTGGGCAGCTGCACGCCAGCCCCCAGA-TCTGGGGGAGG-GTTTTCTGGTTTATGGACTGTCT-CAGGTTCGAACATGCATGGGACGTCCCCTGTTCCCTGTGC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15639176 121 - 61074082 -acttggcaagacaaaaatgtgggcaacatcatgctagtccccaaa-tCCGGGGGAGATTTTTTCTGGTTTGTGCCCCCCCTGAAAGTTTGGGTCTCTTTGGGCTGACCACCACTTGGCATAC i canFam3.chr9 C 0 C 0 e mm10.chr11 75811183 735 + 122082543 I a score=1561415.000000 s hg38.chr17_GL383563v3_alt 138087 425 + 375691 CTTAGCCTGGAACTGAGACTTCTTTTTCTTTTGTATCTGTCCTTCTCAGATCTCATATTTGTATTTTCCAAAACAATCTAGTTGAAGAAATCCTATTTGGTATGTTTGAAATCTTTATGCTCCCAGCTCAAACTCTGGA-----TTAACAACAAAACAGAGGAAAACTCTTTTTCTTATTCAGCAGTCAAACTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGTTGCTGGGAAGTAAAGGAAT----CAAAGGCTTCTAAACAGT-AAAA----------------AATGTCTTTAGA-----GCTCGGCTCAGAG--GG-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGATTTGGTGA-GCTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACCGGCTGCAGATTCAAGAGGAAGCTGG------GAGGGCTG---------TCTGGGGCT--------G s panTro4.chr17 135536 429 + 82630442 CTTAGCCTGGAACTGAGACTTCTTTTTCTTTTGTATCCGTCCTTCTCAGATGTCATATTTGTATTTTCCAAAACAATCTAGTTGAAGAAATCCTATTCGGTATGTT-GAAATCTTTATGCTCCCAGCTCAAACTCTGGA-----TTAACAACAAAACAGAGGAAAACTCTTTTTCTTATTCAGCAGTCAAACTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGTTGCTGGGAAGTAAAGGAAT----CAAAGGCTTCTAAACAGT-AAAA----------------AATGTCTTTAGAATAGAGCTCGGCTCAGAG--GG-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGATTTGGTGA-GCTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACCGGCTGCAGATTCAAGAGGAAACTGG------GAGGGCTG---------TCTGGGGCT--------G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 33038 436 + 73212453 CTTAGCCTGGAACTGAGACTTCTTTTTCTTTTGTATCTGTCCTTCTCAGATGTCATATTTGTGTTTTCCAAAACAATCTAGTTGAAGAAATCCTATTCAGTATGTTTGAAATCTTTATGCTCCCAGCTCAAACTCTGGATTGAGTTAACAACAAAATAGAGGAAAACTCTTTTTCTTATTCAGCAGTCAAACTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGTTGCTGGGAAGTAAAGGAAT----CAAAGGCTTCTAAACAGTAAAAA----------------AATGTCTTTAGAATAGAGCTTGGCTCAGAG--AG-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGATTTGGTGA-GCTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACTGGCTGCAGATTCAACAGGAAGCTGG------GAGAGCTG---------TCTGGGGCT--------G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 93638 424 - 81552678 CTTAGCCTGGAACTGAGACTTCTTTTTCT----TATCTGTCCTTCTCAGATTTCATATTTGTATTTTCCAAAACAATCTAGTTGAAGAAATCCTATTCAATATGTTTGAAATCTTTATGCTCCCAGCTCAAACTCTGGA-----TTAACAACAAAATAGAGGAAAACTCTTTTTCTTATTCAGCAGTCAAACTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGCTGCTGGGAAGTAAAGGAAT----CAAAGCCTTCTAAACAGT-AAGA----------------AATGTCTTCAGAATAGAGCTTGGCTCAGA----G-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGATCTGGTGA-GCTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACCGGCCGCGGATTCAAGAGGAAGCTGG------GAGGGCTG---------TCTGGTGCT--------G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 63676 438 + 80904711 CTTAGCCTGGAACGGAGACTTGTTTTTCTTTTGTATCTGCCCTTCCCAGATTTCATATTTGTATTTTCCAAAACAATCTAGTTGAAGAAATCCTACTCAGTATGTTTGAAATCTTTATGCTACCAGCTCAAACTCTGGATTGAGCTAACAACAAAATAGAGGAAAGCTCTTTTTCTTATTCAGCAGTCAAACTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGTTGCTGGGAAGTAAAGGAAT----CAAAGGCTTCTAAACAGT-AAAA----------------TATGTCTTTAGAATAGAGCTCGGCTCAGAG--AG-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGA-TTGGTGA-GCTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACCAGCAGCAGATTCAAGAGGAAGCGGC--GGGGGGGGGCTG---------TCTGGGGCT--------G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 64126 438 + 80997621 CTTAGCCTGGAACGGAGACTTGTTTTTCTTTTGTATCTGCCCTTCCCAGATTTCATAGTTGTATTTTCCAAAACAATCTAGTTGAAGAAATCCTACTCAGTATGTTTGAAATCTTTATGCTACCAGCTCAAACTCTGGATTGAGCTAACAACAAAATAGAGGAAAGCTCTTTTTCTTATTCAGCAGTCAAACTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGTTGCTGGGAAGTAAAGGAAT----CAAAGGCTTCTAAACAGT-AAAA----------------AATGTCTTTAGAATAGAGCTCGGCTCAGAG--AG-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGATTTGGTGA-GCTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACCAGCAGCAGATTCAAGAGGAAGCGGC---GGTGGGGGCTG---------TCTGGGGCT--------G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 73926 441 + 74645514 CTTAGCCTGGAACTcagacttgtttttcttttgtatctgtCCTTCCCAGATTTCacatttgtattttccaaaacaatCTATTTGAAGAAATCCTATTCAGTATGTTTGAAATCTTTATGCTACCAGCTCAAACTCTGGATTGAGTTAACAACAAAATAGAGGAAAACTCTTTTTCTTATTCAGCAGTCAAGCTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGTTGCTGGGAAGTAAAGGAAT----CAAAGGCTTCTAAACAGT-AAAA----------------AATGTCTTTAGAACAGAGCTCGGCTCAGAG--AG-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGATTTGGTGA-GCTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACCAGCGGCAGATTCAAGAGGAAGCGGGCggggggggggCTG---------Tctggggct--------g i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 59431 435 + 75148670 CTTAGCCTGCAACTGAGACTTGTTTTTCTTTTGTATCTGTCCTTCCCAGATTTCATATTTGTATTTTCCAAAACAATCTAGTGGAAGAAATCCTACTCAGTATCTTTGAAATCTTTATGCTACCAGCTCAAACTCTGGATTGCGTTAATAACAAAATAGAGGAAAACTCTTTTTCTTATTCAGCATTCAAACTTCAAGGCAACTTCAGCCCTGGGAACTCAGCCAGTTGCTGGGAAGTAAAGGAAT----CAAAGGCTTCTAAACAGT-AAAA----------------AATGTCTTTAGAATAGAGCTCAGCTCAGAG--AG-AGC-TTTGGCCTTCCTGCAA--ATTAAGAATAATGATTTGGTGA-GTTTGTTTATCTCCCCTCCACCAGCAAGGCTTGGTCTCCCCAGGGGTAACCAGCAGCACATTCGAGAGGAAGCGGG------GAGGGCTG---------TCTGGGGCT--------G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 879988 433 - 1291538 CTTAGCCTGGAACTGAGACTTCTTTTTCTTTCATATCTGTCCTTCCCAGATGTCCTATTTGCATTTACCAAAACAATCCAGTTGAGGAAATCCTATCCAGTATGTTTGAAACCTTTATGCTACCAGCTCAAACTGTGGACTGAGTTAACAGTAAAACAGAGGAAAACTC--TTTCTTATTCAGCAGTCAAACTTCAAGGCAACTTCAGCCCCAGGAACTCAGTCAGTTCCTGGGAAGTGAAGGAATCAAACAAAGACTTCTAAGCAGT-AAAA----------------AATGTCTTTAGAACAGAGCTAGGCTCAGAG--AG-AGC-TCTGGCCTTCCTTCGA--ATTAAG---AATGATTTGGTGA-CCTCGTTTATCTCCCTTCTCCCAGCAAGGCTCAGCCTCCCCAGGGGTCACTGGCAGCAGACTCAAAAGGAAGCCTG------GAGGGCCG---------TCTGG-GCT--------G i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75811918 425 + 122082543 CTCAGTATGG--CTGGGACTTCATTTGCCTCTGTA---ATCCAGCCC------------TGAATTTGCCCACACAACACAGCTGAGGGAGACTTCCTTGG-AGGTTTGAAGTCTTCATGCTATTGGCTCTGAC--TGGATTGAGTCAACAACAAAAGTGAGCAAAGCTCTTTTTCTTATCTAGCAGTCAA-CTTCAAGGCCGCTCCAGCCCCGGGAAGCCAGCCAATTGCTGGGAA-TGAAGGAAT----C-AAGGCCTGTAAGCAGT-CAGA----------------GCTAGCTTCAGAA-GGAGCTCGGTGCAGCC--TGCAGCATGTGGCCTTGCTGCAAGCACAGAGGGCAGTGGCCTGGCCAGGCCTGATTATTTCTGATCCACCAGT--GTCCTGGCCTCCCCAGGGGTC-TTGGCT-----TCTGAAGAGCAGCGAA------GCCCTCTGCTCCTGGCCTCTGGTGCTTCCATTTAG i mm10.chr11 I 735 C 0 s canFam3.chr9 15639297 438 - 61074082 CTCAGCCTGCAACTGAGACCTATCCT------GTATCTATCCTTCCCCG-TTTCATATTTGCATTTGCCAAGACAATCTAGTTGGGGAAATGCTATCCAGGATGTTTGCAATTTCTATGTTACCAGCTCAGACTCTGGATTGAGTTAACAACAAAATGGACGGAAACTC--TTTCTCCTTCAGCAATCAGACTTCAAGGCAACCTCAACCCTGGGAACTCAGCCAGTTCCCAGGAAGTGAAGGAAT----CAAAGGCCTCTGAACaat-aaaaaaaaaataaaaaaaataaaGTCTTTAGAACGGAGCTCAATTCAGAGCCCA-AGC-TTTGGCCTCACTGCAA--ATTAAGAACAATGAGTTGGTAAAGCTTGTTTATCTCCCTTGCGCCAGC----CCCAG---CCCCGGGGGCAGTGAGCATCAGGTTCCAAAGGCAACTGG------GAGGACTG---------CCGAGGGCT--------G i canFam3.chr9 C 0 I 830 a score=518333.000000 s hg38.chr17_GL383563v3_alt 138512 158 + 375691 GAGAAGGAGGCAGCTCCAACACGCCGCGG-TCAGGCA-------------------GTGTGGGGACAAAGAGGTCTCCTTACTTCCACAGCACC------GAGTCAT----CGAAGTTTACAAGACACTTCTACGTTGATCTGGAAAAAGGAGGTGCTCCTAGTACATCTTAGAAAGATTTCCATAAA s panTro4.chr17 135965 158 + 82630442 GAGAAGGAGGCAGCTCCAATACGCCAGGG-TCAGGCA-------------------GTGTAGGGGCAAAGAGGTCTCCTTACTTCCACAGCACC------GAGTCAT----CGAAGTTTACAAGACACTTCTACGTTGATCTGGAAAAAGGAGGTGCTCCTAGTACATCTTAGAAAGATTTCCATAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 33474 158 + 73212453 CAGAAGGAGGCAGCTCCAATATGCCGGGG-TCAGGCA-------------------GTGTGGGGGTAAAGAGGTCTCCTTACTTCCACAGCACC------GAGTCAT----CTAAGTTTACAAGACGCTTCTACGTTGATCCGGAAAAAGGAGGTGCTCCTAGTACATCTTAGAAAGAGTTCCATAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 94062 158 - 81552678 GAGAAGAAGGCAGCTCCAACACACTGGGG-TCAGGCA-------------------GTGTGGGGGCAAAGAGGTCTCCTTACTTCCACAGCACC------AAGTCAT----CAAAGTTTACAAGACGCTTCTATGTTGATCTGGAAAAAGGAGGTGCTCCTAGTACAGCTCAGAAAGATGTCCATAAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 64114 159 + 80904711 GAGGAGGAGGCAGCTCCAATACGCTGGGG-TCAGGCA-------------------GTGTGGGGGCAGAGAGGTCTCCTCATTTCCACAGCACCCC----GAGTCAT----CAGAGTTTACAAGACACTTCTACGTT-ATCTGGAAAAAGGAGGCGCTCCTGGTACATCTTAGAAAGATTTCCATAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 64564 159 + 80997621 GAGGAGGAGGCAGCTCCAATACGCTGGGG-TCAGGCA-------------------GTGTGGGGGCAGAGAGGTCTCCTCATTTCCACAGCACCCC----GAGTCAT----CAGAGTTTACAAGACACTTCTACGTT-ATCTGGAAAAAGGAGGCGCTCCTGGTACATCTTAGAAAGATTTCCATAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 74367 159 + 74645514 gagaaggaggCAGCTCCAATGTGCTGGGG-TCAGGCA-------------------GTGTGGGGGCAGAGAGGTCTCCTCACTTCCACAGCACCCT----GAGTCAT----CAGAGTTTACAAGACACTTCTACGTT-ATCTGGAAAAAGGAGGCGCTCCTGGTACATCTTAGAAAGATTCCCATAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 59866 160 + 75148670 GAGGAGGAGGCAGCTCCAATGTGCTGGGG-TCGGGCA-------------------GCGTGGGGGCAAAGAGGTCTCCTCACTTCCACAGCACCCC----GAGTCAT----CAGAGTTTACGAGACACTTATACATTGATCTGGAAAAACGAGGCGCTCCTCGTACACCTTAGAAAGATTTCCATAAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 880421 159 - 1291538 GAGAAGGAAGCAGCCCCAACACGCTGGGG-TTGGGCA-------------------GTGCGGGGGCAAAGA-GTCTCCTTACTTCCACAGCAGCCT----GAGTCATCAAACAAAGTTGACAAGACACTTCTACGTTGATCTGGAAAAAGAAGGTACTCCTAGTACATCTT----AGATTTCCATAAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75812343 177 + 122082543 GAGCTTGCTGAGACTCCACCTCCCTGGGGCTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtACAGAGGCCTCCTTCCTTCCAAAGCACCTTGGAAAAGAACT----CAAAATTTACAAGACACATATTCACT-----GGAAAAATA--GTGTTCCTTGTTCATCCTTGAAAGCTTCCTAAGAA i mm10.chr11 C 0 I 358 s canFam3.chr9 15640565 160 - 61074082 GGGAAGGCTGCTGCCCCCAAAACCGAggg-tcattta-------------------gtgtgggggcaaagagctctc---atttccacagcaccctgTATGGTCAAC----CAAAATGGACAAGACACTGATAGGCTGATCTGGAGAAACAGGATGCTCTTAATACATCTCAGGAAG-TTTCCATAAA i canFam3.chr9 I 830 C 0 a score=21709.000000 s hg38.chr17_GL383563v3_alt 138670 7 + 375691 ACGGGCT s panTro4.chr17 136123 7 + 82630442 ACGGGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 33632 7 + 73212453 ACGGGCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 94220 7 - 81552678 ATGGGCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 64273 7 + 80904711 ACGGGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 64723 7 + 80997621 ACGGGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 74526 7 + 74645514 ACGGGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 60026 7 + 75148670 ACGGTCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 880580 7 - 1291538 ATGGGTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15640725 7 - 61074082 ACTGGCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75812520 358 + 122082543 I a score=2158797.000000 s hg38.chr17_GL383563v3_alt 138677 735 + 375691 AAAAAGCAATCATAAAACCACAACATAACACAAATAGGCAAGGGAAAGGATAAACTTCCATCACCTGGAAGCCTCAGAGACAGGAGAGGGTACAC--AGGTG-AGAGCCTTGGCTGGGTGGGAGGTAGGAGTCAGACCGGACCCTCTGCAGAATTAGCAGTGGTGTGCGCTCACCTCTGGAGCTGCTCCTCTGAGATGGGCCTGGCCCCCTAGATAATTGGAGGGTCCTGCA------------TCTCATGGCAGTTTCCA--CCACGCCCTGCTG---CAG----CTCGCACCC-AGA----------G---------------------CCCTCTGATCACGG-GAGTGG------------------------------------GCAG--------------------CTGCCA-TTTACTGCTGCACCAT--------------TCTGACCATGTGCCCCACGTTATTTCATGTAGCCCTCACTACTGCTGTGTCCAG------ga-----ggctcagagaggtcaagttacttacctaaggtcacacagctggtatgtgccagagctgggaagagaacgtgcacttgtatgactcc----GGGATGTTGGCTTTCTGCCTTGAC-GCCCCAGCCTCTTCAGCTGTGGCTGGTGGCAGGTCCTGGGCCTCT-AGCGAGGACGTGCCT-------------GGCTGTGGGCCCAGCCTGGGATTGACCTCACACCCTCT----CTCACACCT-GGGG-CTTCACTGACAGCGGCGGGCACAGTGCCTTCCTTTCTCTTTCCCTAGACACCAGCTCTGA-CCCTCCAATTTCCACCATGATCACAGTGTTCTCAGAGTCAGGCAGCATATGAGGAAAATTGCCCTTTCCCTGGAATA s panTro4.chr17 136130 735 + 82630442 AAAAAGCAATCATAAAACCACAACAAAACACAAACAGGCAAGGGAAAGGATAAACTTCCATCACCTGGAAGCCTCAGAGACAGGAGAGGGTACAC--AGGTG-AGAGCCTTGGCTGGGTGGGAGGTAGGAGTCAGACCGGACCCTCTGCAGAATTAGCAGTGGTGTGCACTCACCTCTGGAGCTGTTCCTCTGAGATGGGCCTGGCCCGCTAGATAATTGGAGGGTCCTGCA------------TCTCATGGCAGTTTCCA--CCACGCCCTGCTG---CAG----CTCGCACCC-AGA----------G---------------------CCCTCTGATCACGG-GAGTGG------------------------------------GCAG--------------------CTGCCA-TTTACTGCTGCACCGT--------------TCTGACCATGTGCCCCACGTTATTTCATGTAGCCCTCGCTACTGCTGTGTCCAG------ga-----ggctcagagaggtcaagttacttacctaaggtcacacagctggtatgtgccagagctgggaagagaacgtgcatttgtatgactcc----gggatgttggctttctgcCTTGAC-GCCCCAGCCTCTTCAGCTGTGGCTGGTGGCAGGTCCTGGGCCTCT-AGCGAGGACGTGCCT-------------GGCTGTGGGCCCAGCCTGGGATTGACCTCACACCCTCT----CTCACACCT-GGGG-CTTCACTGACAGCAGCGGGCACAGTGCCTTCCTTTCTCTTTCCCTAGACACCAGCTCTGA-CCCTCCAATTTCCACCATGATCACAGTGTTCTCAGAGTCAGGCAGCATATGAGGAAAATTGCCCTTTCCCTGGAATA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 33639 744 + 73212453 AAAAAGCAATCATAAAACCACAACAAAACACAAACAGGCAAGGGAAAGGATAAACTTCCGTTATCTGGAAGCCTCAGAGAGAGGAGAGGGTGCCC--AGGTG-AGGGCCTTGGCTGGGTGGGAGGTAGGGGTCAGACTGGACCCTCTGCAGAATTAGCAGTGGTGTGCGCTTACCTCTGGAGCTGTTCCTCTGAGATGGGCCTGGCCCTCTAGATAATTGGAAGGTCCTGCA------------TCTAATGGCAGTTTCCA--CCGTGCCCTGAAG---CAG----CTCACACCC-AGA----------G---------------------CCCTCTGATCACGG-GAGTGG------------------------------------GCAG--------------------CTGCCA-TTTACTGCTGCACCGT--------------TCTGACTATGTGCCCCACATTATTTCATGTAGCCCTCGCTACTGCTGTGTCCAG------ga-----ggctcagagaggtcacgttacttacctaaggccacacagctggtatgtgccggagctgggaagagaacgtgcctttgtacgactcc----aGGATGTTGGCTTTCTGCCTTGAC-GCCCCAGCCTCTTCAGC--CGGCTGGTGGCAGGTCCTGGGCCTCT-AGGGAGGACGTGCCTGCTCGTG---GCCGGCTGGGAGCCCAGCCTGGGATTGACCTCACACCCTCT----CTCACACCT-GGGG-CTGCACTGACAGCGGCGGGCACAGCGCCTTCCTTTCTCTTTCCCTAGACACCAGCTCTGACCCCTCCAATTTCCACCACGATCACAGTGTTCTCAGAGTCAGGCAGCAAATGAGGAAAATTACCCTTTCCCTGGAATA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 94227 723 - 81552678 AAAAAGCAATCACAAAACCACAACAAAACACAAACAGGCAAGGGAAAGGGTAAACTTCCATTATCTGGAAGTCTCAGAGAGAGGAGAGGGTACAC--AGGTG-AGAGCCTTGGCTGGGTGGGAGGTAGGCGTCAGACCGGACCCTCTGCAGAATTAGCAGTGGTGTACGCTCACCTCTGGAGCTGCTCCTCTGAGGTGGGCCTGGCCCCCTAGATAACTGGAGGGTCCTGCA------------TCTCATGGCAGTTTCCA--CCACGCCCTGCTG---CAG----CTCGCACCC-ACA----------G---------------------CCCTCTGATCACGG-CAGTGG------------------------------------GAAG--------------------CTGCCA-TTTACTGCTGCACCGT--------------TCTGACCATGTGCCCCACCTTATTTCAAGTAGCCCTCGCTACTGCTGTGTCCAG------ga-----ggctcagagaggtcaagttacttacctaaggtcacacagctggtacgtgccagagctgggaagagaacgtgcatttgtatgactcT----GGGATGTTGGCTTTCTGCCTTGAC-TCCCCAGCCTCTTCAGC--TGGCTGGTGGCAGGTCCTGGGCCTCT-AGGGAGGACGTGCCTGCTTGTG---GCCGGCTGTGGGCCCAGCCTGGGATTGAC----------------CTCACACCT-GGGG-CTACACTGACAGCGGCGGGCACAGTGCCTTCCTTTCTCTTTCCCTACACATCGGCTCCAA---------TTTCCACCATGATCACAGTGTTCTCGGAGTCAGGCAGCATGCGAGGAAAATTGCCCTTTCCCTGGAATA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 64280 738 + 80904711 GAAAAGCAATCATAACACCACAACAAAACACAAACAGGCAAGAGA-----TAAACTCCCGTAATCCGGACGCCTCAGAGAGAGCAGAGCGTATGC--AGGTG-AGAGCCTTGGCTGGGTGGGAGGTCGGAGTCAGACTGGACCCTCTGCAGAATTAGCAGTGGTGTGTGCTCACCTCTGCAGCTGCTCCTCTGACACGGGCCTGGTTCCCTAGATAACTGGAGGGTCCTGCA------------TCTCGTGGCAGTTCCCA--CCACGGCCTGCTG---CAA----CTCGCACCCGAGA----------G---------------------CCCTCTGATCCCGG-GAACGG------------------------------------GCAG--------------------CCGCCA-TCCACTGCTGCACCGT--------------TCTGACCATGTGCCCCACGTGATTTCATGCAGCCCTCACTACTGCTGTGTCCAG------ga-----ggctcagagaggtcaagttccttacctaaggtcacacagctggcatgtgccagagctgggacgagagcacgcgtttgtgcgactcc-----ggatgctggctttcGGCCTCGAG-TCCCCGGCCTCTTCAGC--TGGCTGGGGGCAGGTCCTGGGCCTCC-AGGGAGGACGCGCCTGCTCGTG---GCCGGTTCTGGGCCCAGCCTGGGACTGACCTCACATCCCCT----CTCGCACCT-GGAG-CTGCACTGACAGCGGCAGGCAGAGGGACCTCCTTTCTCTTTCCCTGGATACCGGCTCTGA-CCCTCCGATTTCCACCATGATCACGGTGTTCCCGGAGTCAGGCAGGGTATGAGGGAAATTGCCCTTTCCCTGGAATA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 64730 738 + 80997621 GAAAAGCAATCATAACACCACAACAAAACACAAACAGGCAAGAGA-----TAAACTCCCGTAATCCGGACGCCTCAGAGAGAGCAGAGCGTATGC--AGGTG-AGAGCCTTGGCTGGGTGGGAGGTCGGAGTCAGACTGGACCCTCTGCAGAATTAGCAGTGGTGTGTGCTCACCTCTGCAGCTGCTCCTCTGACACGGGCCTGGTTCCCTAGATAACTGGAGGGTCCTGCA------------TCTCGTGGCAGTTCCCA--CCACACCCTGCTG---CAA----CTCGCACCCGAGA----------G---------------------CCCTCTGATCCCGG-GAACGG------------------------------------GCAG--------------------CCGCCA-TCCACTGCTGCACCGT--------------TCTGACCATGTGCCCCACGTGATTTCATGCAGCCCTCACTACTGCTGTGTCCAG------ga-----ggctcagagaggtcaagttccttacctaaggtcacacagctggcatgtgccagagctgggacgagagcacgcgtttgtgcgactcc-----ggatgctggctttcGGCCTCGAG-TCCCCGGCCTCTTCAGC--TGGCTGGGGGCAGGTCCTGGGCCTCC-AGGGAGGACGCGCCTGCTCGTG---GCCGGTTCTGGGCCCAGCCTGGGACTGACCTCACACCCCCT----CTCGCACCT-GGAG-CTGCACTGACAGCGGCAGGCAGAGGGACCTCCTTTCTCTTTCCCTGGATACCGGCTCTGA-CCCTCCGATTTCCACCATGATCACGGTGTTCCCGGAGTCAGGCAGGGTATGAGGGAAATTGCCCTTTCCCTGGAATA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 74533 738 + 74645514 GAAAAGCCATCATAACAccacaacaaaacacaaacaggCAAGAGA-----TAAACTCACGTAATCCGGACGCCTCAGAGAGAGCAGAGGGTACGC--AGGTG-AGAGCCTTGGCTGGGTGGGAGGTCGGAGTCAGACTGGACCCTCTGCAGAATTAGCAGTGGTGTGTGCTCACCTCTGCAGCTGCTCCTCTGACACGGGCCTGGTTCCCTAGATAACTGGAGGGTACTGCA------------TCTCATGGCAGTTCCCA--CCACGCCCTGCTG---CAG----CTCGCACCCGAGA----------G---------------------CCCTCTGATCCCGG-GAACGG------------------------------------GCAG--------------------CCGCCA-TCTACCGCTACACCGT--------------TCTGACCATGTGCCCCACGTGATTTCATGCAGCCCTCGCTACTGCTGTGTccag------ga-----ggctcagagaggtcaagttccttacctaaggtcacacagctggcatgTGCCAGAGCTGGGACGAGAGCACGCGTTTGTACGGCTCC-----GGATGCTGGCTTTCGGCCTCGAG-TCCCCGGCCTCTTCAGC--TGGCTGGGGGCAGGTCCTGGGCCTCC-AGGGAGGACGCGCCTGCTCGTG---GCCGGTTCTGGGCCCAGCCTGGGACTGACCTCACACCCCCT----CTCGCACCT-GGAG-CTGCACTGACAGCGGCAGGCAGAGGgacctcctttctctttccctggaTACCAGCTCTGA-CCCTCCAATTTCCACCATGATCACGGTGTTCCTGGAGTCAGGCAGGGTATGAGGGAAATTGCCCTTTCCCTGGAATA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 60033 678 + 75148670 GGAAAGCCATCATAAAACCACAACAAAACACAAACAGGCAAGAGA-----CAAACTCCCGTAATCCGGAAGCCTCAGAGAGAGCAGAGGGTAGGC--AGGTG-AGAGCCGTGGCTGGGTGGGAGGTCGGAGTCAGACTGGGCCCCCTGCAGAATTAGC-----------CTCACCTCTGCAGCTGCTCCTCTGACACGGGCCTGGTGCCCCAGATAACTGGAGGGTCCTGCG------------TCTCGTGGCAGTTCCCA--CCACGCCCTGCTG---CAG----CTCGCACCCGAGA----------G---------------------CCCTCTGATCCCGG-GAGTGG------------------------------------GCGG--------------------CCGCCA-TCTACTGCTGCAC---------------------------------------------------------------GTGTCCAG------ga-----ggctcagagaggtcaacttccttacctaaggtcacacagctggcacgtgccagagctgggacgagagcacgcatttgtgcggctcc-----ggatgctggctttcggccTCGAG-TCCCCGGCCTCTTCAGC--TGGCTGGGGGCAGGTCCTGGGCCTCC-AGGGAGGACGCGCCTGCTCGAG---GCCGGTTCTGGGCCCAGCCTGGGACTGACCTCACACCCTCT----CTCGCTCCT-GGAG-CTGCACCGACAGCGGCAGGCAGGGCGAATTCCTTTCTCTTTCCCTGGATACCAGCTCTGA-CCCTCCAATTTCCACCATGCTCACGGTGTTCCCGGAGTCAGGCAGGGTATGAGGAAAATTGCCCTTTCCCTGGAATA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 880587 752 - 1291538 AAAAGGCAATCGTAAAACCACAACAAACCTC----AGGCAAGGGAAAAGATGAACTTCTGTTATCCGGAAGCCTCAGAGAGAGCAGAGGGTTCAC--AAGTG-AGAGCCTTGGCTGGGTGGG-GGTAGGGGTCAGGCCGGGCCCTTTGCGGAATCAGCAGCGGTGTGGGCTCACCTGTGGAGCTGCTCCTCTGAGA-GGGCCTGACCCCCTAGATAACTGGAGGGTCCTGTA------------TCTAACGGCAG-------------------------------CTTGCACCC-AGA----------G---------------------TCCTCTGATCACAG--AGCGGGCACAGATCAGGAGGGT---GAGTCAGGGCAGCCCAGCAG--------------------CTGCCATTTTACTTCTGCACCAT--------------TCTGAGCATGTGCCCCACCTTATTTCATGTAGCCCTTGGTACTGCTGTGTCCaggaggtaga-----ggctcagagaggtcaagttacttacctgaggtcacacagctagtatgtgccagagcttggaagagaatgcgtatttgtctgactcc----aGGATGTTGGTTTTCTGCCTTGA---CTCCAGCCTCTTCCAC--TGGCTGGTGGCAGGTCCTGGGCCTCT-AGGGAGGACGTGCCTGCTCGTG---GCCGGCTGTGTGCCTGGCCTGGGATTGACCTCATACCCT------CTCACATCTGGGGG-CTGCACTGACTGCGGCGGGCAGAGTGCCTCCCTTTCTCTTTCCCTAGATACCAGCTCTGACCCCTCCAGTTTCCACCACGATCACAGCGTTTTCAGAGTCAAGCAGGGTATGAGGGAAATTGCTCTTTCCCTGGAATA i calJac3.chrUn_GL286409 C 0 I 1172 s mm10.chr11 75812878 790 + 122082543 AAAAGGGAATCATAAAACCA-AACAAAATCCAGATGGGTGAGGGAAATAATAACTTCCAATTATTTGAAAGCCTTAGAGATTAGAGAAACCGCTT--AGGTGCATAGC---AGCTGGGGAGAGGCAGGGGGTCAGGCTGAGTCCCC--CAGAATGAAT-GCTTTGTATG----ACTCTG-AGCTGTCCTTCTGAGACAGGCCTGGTGTCCTAAGTGTTCTCAGGGTCCTGCATTCAATTCCTATTCCCGCTGCAGTGCCCG--GCACCTCCAGCTG---TGGTGCACTGGGCCCCAACAGTTGTTCTGTG---------------------CCCTCTGCTTATGG-GAGCAGGCACAGATGGAGAGGGTGTCGAGGCTGGGCAGCCCAACAG--------------------CTGCCA-TT--CCTGTGCACCAC--------------CCTGAGTGTGTGTCATGGGTTACTTCACGTCGCCCTCACTATTGTTATTTCTGg------aaagctgagctctgagaggttaagttacttgtctgacgtTG-------AGTCATTCTCGGAGCTGGGGAAAAGAGCCATGTGTGAGCTGTCCTGACTGGGGCCATGGCTTCCGCCCGTGAC--CTGCAGTCTCATCACT--TAGCCGGTAG-----CCTGGGACTCTGAGGGGGAACATGTCTCCTTGGG---GCCAGCTGTGCACTCAGCCTGGG-CTCCCCCAACACTCTCTGTCATTCATGTCT-GGAGACCACAATACCAGCGGCAGGCTGGAAG--CTTGTGTTCCTTTTCCTAGGTTTCGGCTCTGACTCCTCCAATTTCTACTACAGTCA--GTGTTTTCTGAGCCAAGCAGGCTATAAGG-AAATCACTCTTCCCTTGGACTT i mm10.chr11 I 358 C 0 s canFam3.chr9 15640732 746 - 61074082 AGGAAGCAATCATAAAACCAAAACAAGACCC-CACTGGCAAGAGAAAGGATGAACATCAGTTCTCTGGCAGCTTCACAGAGAGTGGAGAGCACCCCAGGGTG-AGCGCCTCGGCT-GGTGGGAGGCAGGCATCAGCATGGGC----------ATGAGC-----------TTTTCTTTGGGAGCTGGCCT--TGGAGTGGGCCCGGTACCCC----------GGGGCCATGGG------------TCCAATTGC---TTCTGGTCCTGGCCTTGCTGGCTGAA----CCTGCACCC-GGA----------GCCCGGTAGCCATCCTGTGTCCCCCTCTGATTCTGGGGAGTGG------------------------------------GCAGAGCCAGAAACAGTGGGTGTCAGGGCA-TTTCCCGCCCTCCCCTTGGACGAGGCAGTGTTGAAGCCCGCGCCATGCACGGGTTCA-----CACTTGTTACTCCCGGAGACTG------AG-----TCCTCACGGGGG-----TTCCCGGCCTCCCATCCCGCCGC-GCTGCGCCCC----CGGAGAGGACACAGCTCTGCTGCCCGTCCCC----GGGGCCTGGGCTTCCCGCCGTGGCCTCTCCAGCCTCTTGGGC--CAGCGGGCCGCAGGTTCTGCTGC-CT-GGGGA------TCCCTCTCGGGGCAGCCAGCCGTGGGCCCGGCCTGGGCTTGACCTCACCTCCTCT----CTCACCCCG-AGAG-AGGCA-TGACAGCGCCA-GCAGAGTGCTTTCATTCCTCCTTCCC-AGATACCAGCTCCGACACCTCCAATTTCTACTGTGATCAC--TGTTTTCTGAGTCAAGCAGGGTATAAGGGAAATTGCTCTTTCCCTGGCATA i canFam3.chr9 C 0 C 0 a score=1119561.000000 s hg38.chr17_GL383563v3_alt 139412 490 + 375691 ATTTACCATCTTGTAATTTCCGTTACCTGACCCTGTTGGAGCCT-ATTCCGTGCTGAGCTGTTTGAATTTCCAGCTTGGAAATCCCCAGGCTGGGCGGGAAATGCTGTTTCCTGAGGGAGGAGCAGAC--------GAGGGAGGTGCTGC-------CTGCAGGCTT---GGCGGAGGGTCAGGGGGTGTTTGGGAC-AGGGACACAGTGGGGAGGGGGCTGAGAACAGCAACCAGGCAGCA------TTTGTGATTCTTCTGAATCCAGAGGGGC------------------------------TTGTGTGATGAA---ATTCCACAGGGC----TCTGCCAGGCTGATACGTGGGAAGGGTGGCAGAGGGCTACTGCGACCTACAGGCA---GGGGGTG-------GTCCTAGGCAGGCAAAGGCATTGGTAGGAATGCAGAGAGGGCTACAGAAAGCAAGGGGACTCCTGGGCCAGGCCCTGGACCGGGGCACAGAGTAAGGCTGTTGAGGGTGTTGATTTCAGTTTTTG------ACAAGTCGAGGATCCTCCGGATACCACGT s panTro4.chr17 136865 490 + 82630442 ATTTACCATCTTGTTATTTCCGTTACCTGACCCTGTTGGAGCCT-ATTCCGTGCTGAGCTGTTTGAATTTCCAGCTTGGAAATCCCCAGGCTGGGCGGGAAATGCTGTTTCCTGAGGGAGGAGCAGAC--------GAGGGAGGTGCTGC-------CTGCAGGCTT---GGCGGAGGGTCAGGGGGTGTTTGGGAC-AGGGACACAGTGGGGAGGGGGCTGAGGACAGAAACCAGGCAGCA------TTTGTGATTCTTCTGAATCCAGAGGGGC------------------------------TTGTGTGATGAA---ATTCCACGGGGC----TCTGCCAGGCTGATACGTGGGAAGGGTGGCAGAGGGCTACTGCGACCTACAGGCA---GGGGGTG-------GTCCTAGGAAGGCAAAGGCATTGGTAGGAATGCAGAGAGGGCTACAGAAAGCAAGGGGACTCCTGGGCTAGGCCCTGGACCGGGGCACAGAGTAAGGCTGTTGAGGGTGTTGATTTCAGTTTTTG------ACAAGTCGAGGATCCTCCGGATACCACGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 34383 490 + 73212453 ATTTATCCCCTTGTTATTTCCATTACCTGACCCTGTTGGAGCCT-ATTCCGTGCCGAGCTGTTTGAATTTCCAGCTTGGAAATCCCCAGGCTGGATAGGAAATGCTGTTTCCTGAGGGAGGAGCAGAC--------GAGGGAGGTGCTGC-------CTGCAGGCTT---GGCGGAGGGTCAGGGGGTGTTTGGGAC-AAGGACCCAGTGGGGAGGTGGCTGAGGACAGAAACCAGGCAGCA------TTTGTGATTCTTCTGAATCCAGAGGGGG------------------------------TTGCGTGATGAA---ATTCCACAGGGC----TCTGCCGGGCTGATACGTGGGAAGGGTGGCAGAGGGCCACTGCGACCTACAGCCA---GGGGGTG-------GTCCTAGGAAGGCAAAGGCATTGGTAGGAATGCAGAGAGGGCTACAGAAAGCGAGGGGACTCCTGGGCCAGGCCCTGGACCAGGGCACAGAGTAAGGCTGTTGAGGGTGTTGATTTCGGTTTTTG------ACAAGTGGAGGATCCTCAGGATACCACgt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 94950 467 - 81552678 ATTTATCATCTTGTTATTTCCGTTACCTGACACTGTTGGAGCCT-ATTCCATGCTGAGCTGTTTGAATTTCCAGCTTGGAAGTCCCCAGGCTGAGCGGG-AATGCTGTTTCCTGTGGGAGGAGCAGAC--------GAGGGAGATGCTGC-------CTGCAGGCTT---GGCGGAGGGTCAGGGGGTGTTTGGGAC------CACAGTGGGGAGGGGGCTGAGGACAGAAACCAGGCAGCA------TTTGTGATTCTTCTGAATCCAGAGGGGG------------------------------TTGTGTGATGAA---ATTCCACAGGGC----TCTGCCGGGCTGATACGT-----------------GCTACTGCGACCTACAGCCA---GGGGGTG-------GTCCCAGGAAGGCAAAGGCGCTGGTAAGAATGCAGAGACGGCTGCAGAAAGCGAGGGGACTCCCGGGCCAGGCCCTGGACCAGGGCACAGAGCAGGGCTGTTGAGGGTGTTGATTTCGGTTTTTG------ACAAGTCGAGGAGCCTcaggataccacgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 65018 402 + 80904711 ATTTATCGTCTTGTTATTTCCGTTACCTGACCCTGTTTAAGCCT-CTTCCGTGCTGAGCTGTTTGAATTTCCAGCTTGGAAATCCCCAGGCTGGGCGGGAATTGCTGTTTCCTGACCGAGGAGCAGAC---------AGGGAGGTGCTGC-------CTGCAGGCCT---GGCCGAGGGTCAG-----------------------AGCGGGG----------------------------------------------------------------------------------------------CGTGCGGTGAA---AGTCCACAGGGC----TCTGCTGGGCTGACACGTGGGAAGGGTGGCAGAGGGAGACCGTGACCTGCAGCCA----GGGGTG-------GTCCGAGGAAGG-GAAGGCGTTGGTAGGAATGGGGAG-GGGCTACGGACAGCGAGGGGACTCCTGGGCCAGGCTCTGCACCAGGGCACGGAGTAAGGCTGTTGAGGGTGTTGGTTTCGGTTT----------AAGGTCGAGGAGCCTCAGGAGACCACGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 65468 402 + 80997621 ATTTATCGTCTTGTTATTTCCGTTACCTGACCCTGTTTAAGCCT-CTTCCGTGCTGAGCTGTTTGAATTTCCATCTTGGAAATCCCCAGGCTGGGCGGGAATTGCTGTTTCCTGACGGAGGAGCAGAC---------AGGGAGGTGCTGC-------CTGCAGGCCT---AGCCGAGGGTCAG-----------------------AGCGGGG----------------------------------------------------------------------------------------------CGTGCGGTGAA---AGTCCACGGGGC----TCTGCTGGGCTGACACGTGGGAAGGGTGGCAGAGGGAGACCGTGACCTGCAGCCA----GGGGTG-------GTCCGAGGAAGG-GAAGGCGTTGGTAGGAATGGGGAG-GGGCTACGGACAGCGAGGGGACTCCTGGGCCAGGCTCTGCACCAGGGCACGGAGTAAGGCTGTTGAGGGAGTTGGTTTCGGTTT----------AAGGTCGAGGAGCCTCAGGAGACCACGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 75271 402 + 74645514 ATTTATCATCTTGTTATTTCCATTACCTGACCCTGTTTAAGCCT-CTTCCGTGCTGAGctgtttgaatttccagcttgGAAATCCCCAGGCTGGGCGGGAATTGCTGTTTCCTGACCGAGGAGCAGAC---------AGGGAGGTGCCGC-------CTGCAGGCCT---GGCCGAGGGTCAG-----------------------AGCGGGG----------------------------------------------------------------------------------------------CGTGCAGTGAA---GGTCCACAGGGC----TCTGCTGGGCTGACACGTGGGaagggtggcagagggagaccgCGACCTGCAGCCA----GGGGTG-------GCCCGAGGAAGG-GAAGGCGTTGGTAGGAATGGGGAG-GGGCTACGGAAAGCGAGGGGACTCCTGGGCCAGGCTCTGCACCAGGGCACGGGGTAAGGCTGTCGAGGGTGTTGGTTTTGGTTT----------AAGGTCGAGGAGCCTCAGGAGACCACGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 60711 393 + 75148670 ATTCATCGTCTTGTTATTTCCGTTACCTGACCCTGTTTAAGCCT-CTTCCGTGCTGAG--------ATTTCCAGCTTGGAAATCCCCAGGCTGGGCGGGAAACGCTGTTTCCTGACCGAGGAGCAGAC---------AGGGAGGTGCGGC-------CTGCAGGCCT---GGCCGAGGGTCAG-----------------------AGCGGGG----------------------------------------------------------------------------------------------CGTGCGGTGAA---GGTCCACAGGGC----TCTGCTGGGCTGACACGTGGGAAGGGTGGCAGAGGGAGACGGCGACCTGCAGCCA----GGGGTG-------GTCCGAGGAAGG-GAAGGCACTGGTAGG-ATGGGGAG-GGGCTACGGAAAGCGAGGGGACTCCGGGGCCAGGCTCTGCACCAGGGCACGGCCTAAGGCTGTCGAGGGTGTTGGTTTCGGTTT----------AAAGTCGAGGAGCCTCAGGAGACCACGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 882511 425 - 1291538 ATTAATCACGTTGTTATTTCTGTTAGCTGACCCTGTCTGAGCATGAATCAGTGCTGAGT--GTTGAATTTCCAGCTTAGTAATCCCCAGGCTGGGCGGGAAATGGTGTTTCC-GAGCTAGGAGCAGAC--------GAGGGGCATGCTG--------CTGCAGGCTTGCAGAGGGAGGGTCGGAGAGTGTTTGGGAC-AGCGACACAGTGGGGAGGAGGTTGAGGACAGAATCAAGCCAG-A------TTTGTGATTCTTCTGGGCCCAGAGTGGG-------------------------------GGTGTGGTGAA---ATTCCACAGGGC-----CTGCTGGGCTGATA-GCGGGGAAGGTGGTGGAGGGCTACTGTGACCTGCAGTCA----------------------------GCAAAGGCATTGGTATGAGTGGGGAGGGGGCTGTGGAAAGCAAGGGGACCCCTGG------------ACCAGGGCACAGAGGAAGGCTGT-------------------------------------GAGGGGCCTCAGGAGACCACgt i calJac3.chrUn_GL286409 I 1172 C 0 s mm10.chr11 75813668 497 + 122082543 ATTTATCATCCTGTTATTTCCATTAGCTGACACTGTTGGAGCCC-ATTCCATCCCTAGCTGTTTGAATTTTCAGCTTGGCAATCTCCAGGCCTGGCAG----TAGTATTTCCCGCCCTAAAAG-GGACCTAGGTAAGTGGGAGATGTGGC-------CAGCAGATGT----GTGGTGGGAAAG---------GGGACTTAGAACACAGTAAGA-AGGGGCTGAGGG-AGAGGCCAGGGGGCACTTTATTTTTGGTTTCTTACTAGTCCGGAGGTAG------------------------------GTGTACAGTGGA---GATCCATAGGGCTCCCTCTGATGGATTGGTG-GAGGCAGGGGTGACAATGAGATGCTGGGATTGACAGCTGCATGTGAGTGAGATTGTGTCCAAGGAAGGCAAAGCCATTGGCAAGAATGGGGAGAAGGTTCCAGAAGGCTAGAGGACTCTAGCGC-AGACACTGGACCAGTGAACTGAGCAAGGCTA---AGGAGGTTGAGCTCAGTGTCTG------ACAAGTTTAGAACCTTCAGGAGATGGCGt i mm10.chr11 C 0 I 1409 s canFam3.chr9 15641478 461 - 61074082 ATTTATCATCTTGTTATTTCCATTAGCTGACTCTGTTTGAGCCT-ATTCCATGCTGAGCTGTTTGAATTCCCTGTTTGGAAATCCC---------TTGAAAATGCTGCTTCCCACTGGGGGCGTGGCT---------GGAGGAGTGCTGTGGTCAGATGGGGGACGG---GGCTGAGGGTAAG-----------------------AACCAGG------------GCAGGAAGCAGGGGGCG------TTCTTGCTTCTGCTGACTCCACACGCgtgcgtgtgtgtgtgcgtgtgtgtgcgtgtgtgtgtgtgGTGGAGGGGTTCCACAGGGC----CCTGTT-GGCTGATG-GTGGG--GGGTAGCAGAGCACCCCTTGGGCCCACAGCTA----GGGG---------ACATAAGGAAGGCAAAGCCACTGGA-------------GGGTTCCAGAAAAC---GGGACTGT-------GGCCCTGGACCAGGGCCTGGAGTGAGGCTGGGAAGGATGCTGACTTCAGTTTCCGTTTTCCACCAGTTGCGCATCCTCAAGAGACCAtg- i canFam3.chr9 C 0 C 0 a score=1309923.000000 s hg38.chr17_GL383563v3_alt 139902 527 + 375691 GACaa---cacacagcttaagagcacgggccttgggctcaaatcctcgctctgtcactcgctggcagtgtggtcctgtgcaagttgacggacttctctcagcctcagtttcctcctctgtgaagtggagggaa---tggtgtccaccccccattattcctttaatgtgagcgctaactcagggcaagtg--------tgtaaagACCCAGTCTGGCCTCCAGCT-GGGGTCCATCTGACCCAGGTGGTGGCTGTTTACAGGgatcaactctccccagtttg-ctgggagctttcctggttttagccctgaaagtcccgcatcttgtgaaacccgttggtcctggaaaacctgga-tggttgctcactctGCCTGTGGTCTCCCGCTCCTCA-TTGCACTAAAAGTGCCAGG--TCATGTCTGTGTCCTGGGGAAGGCCGAAGCCCTTGCTAAGGTTTCTGT---------------AATAtcacctgtggctctgaggcc-tgctttggctgagttaattcggtgttgaggtcggtac----gtgtgcttgcacacgtttctgaacc s panTro4.chr17 137355 527 + 82630442 GACaa---cacacagcttaagagcacgggccttgggctcaaatcctcgctctgtcactcgccggcggtgtggtcctgtgcaagtcgacggacttctctcagcctcagtttcctcctctgtgaagtggagggaa---tggtgtccaccccccattattcctttaatgtgagcgctaactcagggcaagtg--------tgtaaagACCCAGTCTGGCCTCCAGCT-GGGGTCCATCTGACCCAGGTGGTGGCTGTTTTCAGGgatcaactctccccagtttg-ctgggaactttcctggttttagccctgaaagtcccgcatcttgtgaaacccattggtcctggaaaacctgga-tggttgctcactctGCCTGTGTTCTCCCGCTCCTCA-TTGCACTAAAAGTGCCAGG--TCATGTCTGTGTCCTGGGGAAGGCCGAAGCCCTTGCTAAGGTTTCTGT---------------AATAtcacctgtggctctgaggcc-tgctttggctgagttaattcggtgttgaggtcgatac----gtgtgcttgcacacgtttctgaatc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 34873 525 + 73212453 ggcaa---cacacggcttaagagcacgggccttgggctcaaatccttgctctgccactcgctgt--gtgcggtcgtgtgcaagctgatggacttctctcagcctcagttttctcctctgtgaagtggagggaa---tggtgtccaccccccattattcctttaatgtgagagctaactcaggagaagtg--------tgtgaagACCCAGTCTGGCCTCCAGCT-GGGCTCCATCTGACCCTAGTGGTGGCTGTTtacagtggtcaactctctccagtttg-ctggaaactttcctggtttcagccctgaaagtcccgcatcttgtgaaacccgttggtcctggaaaacctgga-tggttgctcactctGCCTGTGGTCTCCCGCTCCTCA-CTGCACTAAAAGTGCCAGG--TCACGTCTGTGTCCTGGGGAAGCCTGAAGCCCTTGCTAAGGTTTCTGT---------------AATAtcacctgtggctctgaggcc-tgctttggctgagttaattcagtgttgagatggacgc----gtgcgcttgcacacgtttctgaacc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 95417 521 - 81552678 ggcaa---cacacggctcaacagcacgtgcctcgggctcaactcctcgctctgccactcgctggcggtgt-gtcgtgtgcaagttgacgga--tttctcagcctcagtttcctcctctgtgaagtgaagggaa---tggcgtcca-cccccattattcctttaatgtgagagctaactcaggggaagtc--------tgtaaagACCCAGTCTGGCCTCCAGCT-GGGGTCCATCTGACCCAGGTGGTGGCTGTTtacagtgatcaactctccccagtttg-ctggaaactttcctggttttagccctgaaagtcccacatcttgtgaaacccgttggtcctggaaaacctgga-tcgttgctcactctGCCTGTGGTCTCCTGCTCCTCA-TTGCACTAAAAGTGCCAGG--TCACGCCTGTGTCCTGGGGAAGGCCGAAGCCCTTGCTAAGGTTTCTGT---------------AATATCACCTGTGGCTATGAGGCC-TGCTTTGGCTGAGTTAATTCAGTGGTGAGGTGGATAC----ATGTGC-TGTACACGTTT-TGAACC i nomLeu3.chr19 C 0 I 2252 s rheMac3.chr16 65420 492 + 80904711 GACAa--gcacagagctg-agagctcgggcctcgggctgaaatcctcgctctgccacgtgctggcggtgtggtcgtgtgcacgttgatggacttctctcagcctcagtttcctcctctgtgaagcggagggca---tggtgtcca-cccccatgattcctttaatgcgagagctgactgaggggacgtg--------tggagagACCCAGTCT------------GGGGCCCATGTGACCCAGGTGGTGGCTGTTtacggtgatcaactctccccagtttg-ctggaaac-ttcctggcttcagccccgaaagtcccgcacctggcgagacccgctggtcctggaacacctggg-tgggtgcttgctctGCCTGTGGCCTCCTGCTCCTCG-CTGCAT--AATGTGCCGGG--TCACGTCGGTGTCCTGCGGAAGGCCGCAGCCCTCGCTGAGGTTTCCGT---------------AACATCGCCTGTGGCT---------------------GTTATTTCAGTGTTGAGGTGGATAC----GTGTCCTTGCACACATttctgaacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 65870 503 + 80997621 GACAa--gcacagagccg-agagctcgggcctcgggctgaaatcctcgctctgccacgcgctggcggtgtggtcgtgtgcacgttgatggacttctctcagcctcagtttcctcctctgtgaagcggagggca---tggtgtcca-cccccatgattcctttaatgcgagagctgactgaggggacgtg--------tggagagACCCAGTCTGGCCTCCGGCC-GGGGCCCATGTGACCCAGGTGGTGGCTGTTtatggtgatcaactctccccagtttg-ctggaaac-ttcctggcttcagccccgaaagtcccgcacctggcgagacccgctggtcctggaacacctggg-tgggtgcttgctctGCCTGTGGCCTCCTGCTCCTCG-CTGCAT--AATGTGCCGGG--TCACGTCGGTGTCCTGCGGAAGGCCGCAGCCCTCGCTGAGGTTTCCGT---------------AACGTCGCCTGTGGCT---------------------GTGATTTCAGTGTTGAGGTGGATAC----GTGTCCTTGCACACAtttctgaacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 75673 506 + 74645514 GACAA--GCACAGAGCCGAAGAGCTCGGGCCTCAGGCTGAAATCCTCGCTCTGCCACTCGCTGGCGGTGTGGTCGTGTGCAAGTTGATGgacttctctcagcctcagtttcctcctccgTGAAGCCGAGGGCA---TGGTGTCCA-CCCCCAAGATTCCTTTAATGCAAGAGCTGACTGAGGGCACGTG--------TGGAGAAACCCAGTCTGGCCTCCGGCC-GGGGCCCATGTGACCTAGGTGGTGGCTGTTTACGGTGATCAACTCTCCCCAGTTTG-CTGGAAACTTTCCTGGCTTCAGCCCCGAAAGTCCCGCACCTGGCGAAACCCGCTGGTCCTGGAAAACCTGGG-TGGGTGCTTGCTCTGCCTGTGgcctcctgctcctcc-ctgcAC-AAATGTGCCAGG--TCACGTCGGTGTCCTGCGGAAGGCCGCAGCCCTTGCTGAGGTTTCCGT---------------AACATCGCCTGTGGCT---------------------GTTATTTCAGTGTTGAGGTGGATAC----GTGTCCTTGCACACATTTCTGAACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 61104 506 + 75148670 GACAa--gcacagagccgaagagcacgggcctcgggctcaaatcctcgctctgccactcgctggcggtgtggtcgtgtgcaagttgacagacttctctcagcctcagtttcctcctccgagcagcggaggaca---tggtgtccg-cccccacaattcctttaaggCGAGAGCTGACTAAGGGGACGTG--------TGGAGAGACCCGGTCTGGCCTCCAGCC-GGGGCCCATGTGACCCAGGTGGTGGCTGTTtacggtgatcaactctccccagtttg-ctggaaactttcctggcttcagccccgaaagtcccgcacctggcgagacccgctggtcctggaaaacctggg-tgggtgctcgctctGCCTGTGGCCTCCTGCTCCTCG-CTGCAT-AAAAGTGCCAGG--TGAGGTCTGTGTCCTGCGGAAGGCCGCAGCCCTCGCTGAGGTTTCTGT---------------AACATCGCCTGTGGCT---------------------GTTATTTCAGTGTTGAGGTGGATGC----GTGTCCTTGCACACATTTCTGAACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 882936 516 - 1291538 gagaa--gcacaccgctcacaagcacaggccttgggct-aaaccctcgctctgccacgctc------tgcggtcccgtgaaagtcacggaccccctctcagccttggcatcctcctctgtggagtatggggaa---tgacaaccatcccacactattcctttaatgtgagCGCTGA-----GGGTCAGC--------TGGAG----CTCTCTTGGCCTCCAGCTGGGGGTCCATGGGACCCAGGTGCTGGCTGTTtagggtgatcagcaatccccagtttgcctggaaacttccctggtttcagcactgatagtcccacctcttgtgaaaccccttggtcctggaaagtctgggacggttggtcattctGCCTGTGGTCTCATGCGCCTCAGCTGCATTAAAAGCGCCAGG--TCACATCTGTGTCCCGGGGAAGGCCAAAGCCCCTgctaaggtttctgt---------------gatagcacctctggctctgaggtc-tgctttggctgagttaattcagtgttgaagtagatac----gtgatctggcacacatttctgagcc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15641939 512 - 61074082 gacaggcgcacacagcttgagagcaggagccttgggtgcag-----------gccccgtgctggctgtgttatcttgtgtaaattgctttccctctcccagcctcagttttttcatctgcaaagtgggaggaatactaatgccttcctctcagggtt--------gtgagaactaaTGGGGGGGGCGGGGCGAGTACGGGAGGGGTTTAGTCTAGCAGCCAGCC-GTGGCATGTGTGACTCAGATG-------------GACATGGGCTCTTCCCAGGCTGCCCAGGGACTCTGCTGGCTTGGGCATTTTTA-TTGTGCATCCTGGGCATCCTCTTAGTTGTGGGGAGACTGGG-ACGGTGGTCGAGCTG-------------GCTCCAGG-ATG----GAAGCTCTCAGAGcccacctcagcgccctggggaaggccagagcctttgccaagg-ttctgtataatcctgagcgccagcgtcactcg-ggctctgagctcttgctctggctgagggaactccttgttgggggacaaacttaagtttccttattcaagattctgaacc i canFam3.chr9 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I a score=75797.000000 s hg38.chr17_GL383563v3_alt 140429 34 + 375691 gcagagactcagatgtgacattcagcccccatt-c s panTro4.chr17 137882 34 + 82630442 gcagagactcagatgtgacattcagcccccgtt-c i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 35398 35 + 73212453 acagagactcagatgtgacattcggcccccgttcc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 65912 33 + 80904711 acagagactcagatgtgacgttccgcccc-gtt-c i rheMac3.chr16 C 0 C 0 s macFas5.chr16 66373 32 + 80997621 ac--agactcagatgtgacgttccgcccctgtt-c i macFas5.chr16 C 0 C 0 s papAnu2.chr16 76179 34 + 74645514 ACAGAGACTCAGACGTGACGTTCCGCCCCTGTT-C i papAnu2.chr16 C 0 I 5 s chlSab2.chr16 61610 33 + 75148670 ACGGAGACT-AGATGTGACGTTCCGCCCCTGTT-C i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 883452 34 - 1291538 acagagactcagatgtgacattcagcccccttt-c i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15642451 34 - 61074082 acagagatccagatgtgaaattcgggcccttct-t i canFam3.chr9 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e nomLeu3.chr19 95938 2252 - 81552678 I a score=8785.000000 s hg38.chr17_GL383563v3_alt 140463 4 + 375691 cccc s panTro4.chr17 137916 4 + 82630442 cccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 35433 4 + 73212453 cccc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 65945 4 + 80904711 cccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 66405 4 + 80997621 cccc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 61643 4 + 75148670 CCCC i chlSab2.chr16 C 0 I 10 s calJac3.chrUn_GL286409 883486 4 - 1291538 cccc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15642485 4 - 61074082 cact i canFam3.chr9 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e papAnu2.chr16 76213 5 + 74645514 I e nomLeu3.chr19 95938 2252 - 81552678 I a score=3033.000000 s hg38.chr17_GL383563v3_alt 140467 2 + 375691 ca s panTro4.chr17 137920 2 + 82630442 ca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 35437 2 + 73212453 ca i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 65949 1 + 80904711 -a i rheMac3.chr16 C 0 I 2 s macFas5.chr16 66409 1 + 80997621 -a i macFas5.chr16 C 0 I 2 s papAnu2.chr16 76218 2 + 74645514 TA i papAnu2.chr16 I 5 C 0 s calJac3.chrUn_GL286409 883490 2 - 1291538 ca i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15642489 2 - 61074082 ca i canFam3.chr9 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e chlSab2.chr16 61647 10 + 75148670 I e nomLeu3.chr19 95938 2252 - 81552678 I a score=8282.000000 s hg38.chr17_GL383563v3_alt 140469 7 + 375691 gatccat s panTro4.chr17 137922 7 + 82630442 gatccat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 35439 7 + 73212453 gatccat i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 65952 7 + 80904711 aatgcat i rheMac3.chr16 I 2 C 0 s papAnu2.chr16 76220 7 + 74645514 AATGCAT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 883492 7 - 1291538 aattcaa i calJac3.chrUn_GL286409 C 0 I 1 s canFam3.chr9 15642491 7 - 61074082 aatccat i canFam3.chr9 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e chlSab2.chr16 61647 10 + 75148670 I e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I a score=29215.000000 s hg38.chr17_GL383563v3_alt 140476 55 + 375691 aggcacaaaGCACCTGG--GTGTCAGAGACACCGCAGACGTCTGGGGTGGGATGGGG s panTro4.chr17 137929 55 + 82630442 aggcacaaaGCATCTGG--GTGTTGGAGACACCGCAGACGTTTGGGGTGGGATGGGG i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76227 57 + 74645514 AGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 883500 55 - 1291538 aatcgcaaggcatctgg--gtgtgtgggacaccacagacatctggggtgggatgggg i calJac3.chrUn_GL286409 I 1 C 0 s canFam3.chr9 15642498 56 - 61074082 atgcataa-gcTTCCGGGTGTGCAGGCGACCCTGGGGGCGATCAGGGTGGGGTGAGG i canFam3.chr9 C 0 I 874 e mm10.chr11 75814165 1409 + 122082543 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=3930.000000 s hg38.chr17_GL383563v3_alt 140531 12 + 375691 GCGCTGAGATCA s panTro4.chr17 137984 12 + 82630442 GCGCTGAGATCA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76284 12 + 74645514 GCCCTGAGATCA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 883555 12 - 1291538 gggcttatgtcA i calJac3.chrUn_GL286409 C 0 I 6 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=1842.000000 s hg38.chr17_GL383563v3_alt 140543 9 + 375691 CCGTAGTGC s panTro4.chr17 137996 9 + 82630442 CTGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76296 9 + 74645514 CTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7402.000000 s hg38.chr17_GL383563v3_alt 140552 29 + 375691 AATCCACAGGCACAAGGCACCTGGGTGTG s panTro4.chr17 138005 29 + 82630442 AATCCACAGGCACAAGGCACCTGGGTGTG i panTro4.chr17 C 0 I 167 s papAnu2.chr16 76220 29 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTG i papAnu2.chr16 T 85 I 2 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6760.000000 s hg38.chr17_GL383563v3_alt 140581 25 + 375691 GGAGACACCGCAGACGTCTGGGGTG s panTro4.chr17 138201 25 + 82630442 GGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 I 167 T 83 s papAnu2.chr16 76251 25 + 74645514 GGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 I 2 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7252.000000 s hg38.chr17_GL383563v3_alt 140606 31 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138143 31 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 31 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=12228.000000 s hg38.chr17_GL383563v3_alt 140637 52 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTG s panTro4.chr17 138174 52 + 82630442 TCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76222 54 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7252.000000 s hg38.chr17_GL383563v3_alt 140689 31 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138143 31 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 31 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=18943.000000 s hg38.chr17_GL383563v3_alt 140720 81 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138174 81 + 82630442 TCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76222 83 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=12521.000000 s hg38.chr17_GL383563v3_alt 140801 54 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTG s panTro4.chr17 138255 54 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTG i panTro4.chr17 C 0 T 166 s papAnu2.chr16 76220 56 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7252.000000 s hg38.chr17_GL383563v3_alt 140855 31 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138143 31 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 T 166 C 0 s papAnu2.chr16 76276 31 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=18943.000000 s hg38.chr17_GL383563v3_alt 140886 81 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138174 81 + 82630442 TCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76222 83 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19227.000000 s hg38.chr17_GL383563v3_alt 140967 83 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138255 83 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTGGGATGGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 85 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19218.000000 s hg38.chr17_GL383563v3_alt 141050 83 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138338 83 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACATCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 85 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=20485.000000 s hg38.chr17_GL383563v3_alt 141133 85 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138421 85 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76220 87 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=18934.000000 s hg38.chr17_GL383563v3_alt 141218 81 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138423 81 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76222 83 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=546.000000 s hg38.chr17_GL383563v3_alt 141299 2 + 375691 AA s panTro4.chr17 138504 2 + 82630442 AA i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76220 2 + 74645514 AA i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19480.000000 s hg38.chr17_GL383563v3_alt 141301 83 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138423 83 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 T 83 T 83 s papAnu2.chr16 76222 85 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19489.000000 s hg38.chr17_GL383563v3_alt 141384 83 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138423 83 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 T 83 T 83 s papAnu2.chr16 76222 85 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=18965.000000 s hg38.chr17_GL383563v3_alt 141467 83 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAAACGTCTGGGGTGGGATGGGGGCGCTGAAATCACCGTAGTGCAA s panTro4.chr17 138423 83 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 T 83 T 166 s papAnu2.chr16 76222 85 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=10388.000000 s hg38.chr17_GL383563v3_alt 141550 45 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTC s panTro4.chr17 138340 45 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACATC i panTro4.chr17 T 166 I 83 s papAnu2.chr16 76222 47 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTT i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=8171.000000 s hg38.chr17_GL383563v3_alt 141595 38 + 375691 TGGGGTGTGATGGGGGCGCTGAAAACACCGTAGTGCAA s panTro4.chr17 138468 38 + 82630442 TGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 I 83 T 416 s papAnu2.chr16 76269 38 + 74645514 TGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 87 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=4562.000000 s hg38.chr17_GL383563v3_alt 141633 52 + 375691 TCCACAGGCACAAGGCACCTGGGTGTCGGAGACACCGCAGACGTCTGGGGTG s panTro4.chr17 138090 52 + 82630442 TCCATAGGCACAAGGCATCTGGGTGTCGGAGACACCGCAGACGTCTGGTGTG i panTro4.chr17 T 416 I 9 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 87 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=0.000000 s hg38.chr17_GL383563v3_alt 141685 9 + 375691 GGATGGTCC e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 87 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C e panTro4.chr17 138142 9 + 82630442 I a score=2028.000000 s hg38.chr17_GL383563v3_alt 141694 21 + 375691 GCGCTGAGATCACCGTAGTGC s panTro4.chr17 138151 21 + 82630442 GCGCTGAGATCACCGTAGTGC i panTro4.chr17 I 9 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 87 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=10728.000000 s hg38.chr17_GL383563v3_alt 141715 47 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTT s panTro4.chr17 138172 47 + 82630442 AATCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTC i panTro4.chr17 C 0 I 166 s papAnu2.chr16 76220 49 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTT i papAnu2.chr16 T 87 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=8743.000000 s hg38.chr17_GL383563v3_alt 141762 36 + 375691 TGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138385 36 + 82630442 TGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 I 166 C 0 s papAnu2.chr16 76269 36 + 74645514 TGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=20026.000000 s hg38.chr17_GL383563v3_alt 141798 85 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138421 85 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 T 319 s papAnu2.chr16 76220 87 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 72 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=0.000000 s hg38.chr17_GL383563v3_alt 141883 14 + 375691 TCCACAGGCACAAA e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 72 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C e panTro4.chr17 138506 319 + 82630442 T a score=8783.000000 s hg38.chr17_GL383563v3_alt 141897 39 + 375691 GGCACCTGG--GTGTCGGAGACACCGCATACGTTTGGGGTG s panTro4.chr17 138187 39 + 82630442 GGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 T 319 T 83 s papAnu2.chr16 76235 41 + 74645514 GGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 72 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6296.000000 s hg38.chr17_GL383563v3_alt 141936 29 + 375691 GGATGGGGGCGCTGAGATCCCCGTAGTGC s panTro4.chr17 138143 29 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 29 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=12774.000000 s hg38.chr17_GL383563v3_alt 141965 54 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTG s panTro4.chr17 138172 54 + 82630442 AATCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76220 56 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=4282.000000 s hg38.chr17_GL383563v3_alt 142019 18 + 375691 GGATGGGGGCGCTGAGAT s panTro4.chr17 138143 18 + 82630442 GGATGGGGGCGCTGAGAT i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 18 + 74645514 GGACGGAGGCCCTGAGAT i papAnu2.chr16 C 0 T 81 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=1356.000000 s hg38.chr17_GL383563v3_alt 142037 7 + 375691 CCCCGTA s panTro4.chr17 138161 7 + 82630442 CACCGTA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76213 7 + 74645514 CCCCATA i papAnu2.chr16 T 81 I 2 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=348.000000 s hg38.chr17_GL383563v3_alt 142044 6 + 375691 CTGCAA s panTro4.chr17 138168 6 + 82630442 GTGCAA i panTro4.chr17 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76220 2 + 74645514 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=10237.000000 s hg38.chr17_GL383563v3_alt 142050 52 + 375691 TCCACAGGCTCTGGGCACCTGG--GTGTCCGACACACCGCAGACGTCTGGGGTG s panTro4.chr17 138174 52 + 82630442 TCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76222 54 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 I 2 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6182.000000 s hg38.chr17_GL383563v3_alt 142102 29 + 375691 GGATGGGGGTGTTGAGATCACCGTAGTGC s panTro4.chr17 138143 29 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 29 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=11787.000000 s hg38.chr17_GL383563v3_alt 142131 54 + 375691 AATCCACAGGCACAAGGCAAATGG--GTGTCAGAGACACCGCAGACGTCTGGGGTG s panTro4.chr17 138172 54 + 82630442 AATCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76220 56 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6706.000000 s hg38.chr17_GL383563v3_alt 142185 29 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138143 29 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 29 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=18371.000000 s hg38.chr17_GL383563v3_alt 142214 83 + 375691 AATCCACAGGCACAAGGCACCTGG--GAGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGATGAGATCACCATAGTGC s panTro4.chr17 138172 83 + 82630442 AATCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 85 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=12980.000000 s hg38.chr17_GL383563v3_alt 142297 54 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTG s panTro4.chr17 138255 54 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTG i panTro4.chr17 C 0 T 166 s papAnu2.chr16 76220 56 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6715.000000 s hg38.chr17_GL383563v3_alt 142351 29 + 375691 GGATGGGGGCGCTGAGATCACCGTAGCGC s panTro4.chr17 138143 29 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 T 166 C 0 s papAnu2.chr16 76276 29 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=20026.000000 s hg38.chr17_GL383563v3_alt 142380 85 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138172 85 + 82630442 AATCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 87 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19677.000000 s hg38.chr17_GL383563v3_alt 142465 83 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138257 83 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76222 85 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=11975.000000 s hg38.chr17_GL383563v3_alt 142548 52 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTTTGGGGTG s panTro4.chr17 138340 52 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACATCTGGGGTG i panTro4.chr17 C 0 T 249 s papAnu2.chr16 76222 54 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7252.000000 s hg38.chr17_GL383563v3_alt 142600 31 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138143 31 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 T 249 C 0 s papAnu2.chr16 76276 31 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=11664.000000 s hg38.chr17_GL383563v3_alt 142631 50 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGG s panTro4.chr17 138174 50 + 82630442 TCCATAGGCACAAGGCACCTGG--GTGTCGGAGACACCGCAGACGTCTGGGG i panTro4.chr17 C 0 I 249 s papAnu2.chr16 76222 52 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7270.000000 s hg38.chr17_GL383563v3_alt 142681 31 + 375691 TGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138473 31 + 82630442 TGGGATGGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 I 249 C 0 s papAnu2.chr16 76274 31 + 74645514 TGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=546.000000 s hg38.chr17_GL383563v3_alt 142712 2 + 375691 AA s panTro4.chr17 138504 2 + 82630442 AA i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76220 2 + 74645514 AA i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6406.000000 s hg38.chr17_GL383563v3_alt 142714 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138423 27 + 82630442 TCCACAGGCACAAGGCACCTGGGTGTG i panTro4.chr17 T 83 T 416 s papAnu2.chr16 76222 27 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTG i papAnu2.chr16 C 0 I 2 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=14238.000000 s hg38.chr17_GL383563v3_alt 142741 56 + 375691 GGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138034 56 + 82630442 GGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 T 416 C 0 s papAnu2.chr16 76251 56 + 74645514 GGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 I 2 T 87 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=4400.000000 s hg38.chr17_GL383563v3_alt 142797 53 + 375691 TCCACAGGCACAAGGCACCTGGGTGTCGGAGACACCGCAGACGTTTGGGGTGG s panTro4.chr17 138090 53 + 82630442 TCCATAGGCACAAGGCATCTGGGTGTCGGAGACACCGCAGACGTCTGGTGTGA i panTro4.chr17 C 0 I 333 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 87 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2149.000000 s hg38.chr17_GL383563v3_alt 142850 29 + 375691 GATGGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138476 28 + 82630442 GAT-GGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 I 333 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 87 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=546.000000 s hg38.chr17_GL383563v3_alt 142879 2 + 375691 AA s panTro4.chr17 138504 2 + 82630442 AA i panTro4.chr17 C 0 T 249 s papAnu2.chr16 76220 2 + 74645514 AA i papAnu2.chr16 T 87 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19406.000000 s hg38.chr17_GL383563v3_alt 142881 83 + 375691 TCCACAGGCACAAGGCACTTGG--GTGTGGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138257 83 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 T 249 C 0 s papAnu2.chr16 76222 85 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=3683.000000 s hg38.chr17_GL383563v3_alt 142964 38 + 375691 TCCACAGGCACAAGGCACCTGGGTGTGGGAGACACCGC s panTro4.chr17 138340 38 + 82630442 TCCACAGGCACAAGGCACCTGGGTGTGGGAGACACCGC i panTro4.chr17 C 0 T 249 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=0.000000 s hg38.chr17_GL383563v3_alt 143002 2 + 375691 AA e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C e panTro4.chr17 138378 249 + 82630442 T a score=5940.000000 s hg38.chr17_GL383563v3_alt 143004 72 + 375691 GACGTTTGGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAATCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138129 72 + 82630442 GACGTCTGGTGTGAGGATGGGGGCGCTGAGATCACCGTAGTGCAATCCATAGGCACAAGGCACCTGGGTGTC i panTro4.chr17 T 249 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=13466.000000 s hg38.chr17_GL383563v3_alt 143076 54 + 375691 GGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138201 54 + 82630442 GGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76251 54 + 74645514 GGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 56 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=20214.000000 s hg38.chr17_GL383563v3_alt 143130 85 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138255 85 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 87 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19131.000000 s hg38.chr17_GL383563v3_alt 143215 81 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138340 81 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACATCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76222 83 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=20476.000000 s hg38.chr17_GL383563v3_alt 143296 85 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138421 85 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76220 87 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2385.000000 s hg38.chr17_GL383563v3_alt 143381 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138423 27 + 82630442 TCCACAGGCACAAGGCACCTGGGTGTG i panTro4.chr17 T 83 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=13741.000000 s hg38.chr17_GL383563v3_alt 143408 56 + 375691 AGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138450 56 + 82630442 GGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 T 332 s papAnu2.chr16 76251 56 + 74645514 GGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 56 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2479.000000 s hg38.chr17_GL383563v3_alt 143464 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138174 27 + 82630442 TCCATAGGCACAAGGCACCTGGGTGTC i panTro4.chr17 T 332 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=13204.000000 s hg38.chr17_GL383563v3_alt 143491 54 + 375691 AGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138201 54 + 82630442 GGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76251 54 + 74645514 GGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 56 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=20214.000000 s hg38.chr17_GL383563v3_alt 143545 85 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138255 85 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 87 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2385.000000 s hg38.chr17_GL383563v3_alt 143630 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138340 27 + 82630442 TCCACAGGCACAAGGCACCTGGGTGTG i panTro4.chr17 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=13732.000000 s hg38.chr17_GL383563v3_alt 143657 56 + 375691 GGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138367 56 + 82630442 GGAGACACCGCAGACATCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76251 56 + 74645514 GGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 56 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2385.000000 s hg38.chr17_GL383563v3_alt 143713 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138423 27 + 82630442 TCCACAGGCACAAGGCACCTGGGTGTG i panTro4.chr17 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6498.000000 s hg38.chr17_GL383563v3_alt 143740 25 + 375691 AGAGACACCGCAGACGTCTGGGGTG s panTro4.chr17 138450 25 + 82630442 GGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 C 0 T 332 s papAnu2.chr16 76251 25 + 74645514 GGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 56 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7252.000000 s hg38.chr17_GL383563v3_alt 143765 31 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138143 31 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 T 332 C 0 s papAnu2.chr16 76276 31 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2479.000000 s hg38.chr17_GL383563v3_alt 143796 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138174 27 + 82630442 TCCATAGGCACAAGGCACCTGGGTGTC i panTro4.chr17 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6751.000000 s hg38.chr17_GL383563v3_alt 143823 25 + 375691 GGAGACACCGCAGACGTTTGGGGTG s panTro4.chr17 138201 25 + 82630442 GGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76251 25 + 74645514 GGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 56 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7252.000000 s hg38.chr17_GL383563v3_alt 143848 31 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138143 31 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 31 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2479.000000 s hg38.chr17_GL383563v3_alt 143879 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138174 27 + 82630442 TCCATAGGCACAAGGCACCTGGGTGTC i panTro4.chr17 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=6751.000000 s hg38.chr17_GL383563v3_alt 143906 25 + 375691 GGAGACACCGCAGACGTTTGGGGTG s panTro4.chr17 138201 25 + 82630442 GGAGACACCGCAGACGTCTGGGGTG i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76251 25 + 74645514 GGAGACACTGCAGACGTTTGGGGTG i papAnu2.chr16 T 56 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=7252.000000 s hg38.chr17_GL383563v3_alt 143931 31 + 375691 GGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138143 31 + 82630442 GGATGGGGGCGCTGAGATCACCGTAGTGCAA i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76276 31 + 74645514 GGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 C 0 T 56 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=2479.000000 s hg38.chr17_GL383563v3_alt 143962 27 + 375691 TCCACAGGCACAAGGCACCTGGGTGTC s panTro4.chr17 138174 27 + 82630442 TCCATAGGCACAAGGCACCTGGGTGTC i panTro4.chr17 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e papAnu2.chr16 76307 56 + 74645514 T e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=13466.000000 s hg38.chr17_GL383563v3_alt 143989 54 + 375691 GGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138201 54 + 82630442 GGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76251 54 + 74645514 GGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 56 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=19677.000000 s hg38.chr17_GL383563v3_alt 144043 83 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGC s panTro4.chr17 138255 83 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGAGTGGGATGGGGGCGCTGAGATCACTGTAGTGC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 85 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGC i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=20214.000000 s hg38.chr17_GL383563v3_alt 144126 85 + 375691 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTTTGGGGTGGGATGGGGGCGCTGAGATCACCGTAGTGCAA s panTro4.chr17 138338 85 + 82630442 AATCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACATCTGGGGTGGGATGGGGGCGCTGAGATCACTGTAGTGCAA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 76220 87 + 74645514 AATGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAGGCCCTGAGATCACTGTAACGCAA i papAnu2.chr16 T 85 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=14536.000000 s hg38.chr17_GL383563v3_alt 144211 60 + 375691 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGG s panTro4.chr17 138423 60 + 82630442 TCCACAGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGGG i panTro4.chr17 C 0 T 83 s papAnu2.chr16 76222 62 + 74645514 TGCATAGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGAG i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=4857.000000 s hg38.chr17_GL383563v3_alt 144271 21 + 375691 GCGCTGAGATCACCGTAGTGC s panTro4.chr17 138400 21 + 82630442 GCGCTGAGATCACTGTAGTGC i panTro4.chr17 T 83 C 0 s papAnu2.chr16 76284 21 + 74645514 GCCCTGAGATCACTGTAACGC i papAnu2.chr16 C 0 T 85 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e macFas5.chr16 66410 2 + 80997621 I e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=546.000000 s hg38.chr17_GL383563v3_alt 144292 1 + 375691 A s panTro4.chr17 138421 1 + 82630442 A i panTro4.chr17 C 0 C 0 s macFas5.chr16 66412 1 + 80997621 a i macFas5.chr16 I 2 C 0 s papAnu2.chr16 76220 1 + 74645514 A i papAnu2.chr16 T 85 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e nomLeu3.chr19 95938 2252 - 81552678 I e ponAbe2.chr17 35446 0 + 73212453 C a score=3567.000000 s hg38.chr17_GL383563v3_alt 144293 6 + 375691 ATCCAC s panTro4.chr17 138422 6 + 82630442 ATCCAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 98190 6 - 81552678 atccat i nomLeu3.chr19 I 2252 C 0 s macFas5.chr16 66413 6 + 80997621 atgcat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 76221 6 + 74645514 ATGCAT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e chlSab2.chr16 61647 10 + 75148670 I e rheMac3.chr16 65959 0 + 80904711 C e ponAbe2.chr17 35446 0 + 73212453 C a score=120847.000000 s hg38.chr17_GL383563v3_alt 144299 54 + 375691 AGGcacaaggcacctgg--gtgtgggagacaccgcagacgtttggggtgggatggg s panTro4.chr17 138428 54 + 82630442 AGGCACAAGGCACCTGG--GTGTGGGAGACACCGCAGACGTCTGGGGTGGGATGGG i panTro4.chr17 C 0 I 1 s ponAbe2.chr17 35446 54 + 73212453 aggcacaaggcatccgg--gtgtgggagacactgcagacgtttgtgttgggatggg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 98196 54 - 81552678 aggcacgaggcatctgg--gtgtggcagaccccacagacgttcggggtgggatggg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 65959 56 + 80904711 aggcacaaggcatctgggtgtgtgggagacactgcagacgtttggggtgggacgga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 66419 56 + 80997621 aggcacaaggcatctgggtgtgtgggagacactgcagacgtttggggtgggacgga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 76227 56 + 74645514 AGGCACAAGGCATCTGGGTGTGTGGGAGACACTGCAGACGTTTGGGGTGGGACGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 61657 56 + 75148670 AGGcacgaggcatctgggtgtgtgggagacactgcagacgtctggggtgggacgga i chlSab2.chr16 I 10 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I a score=2100.000000 s hg38.chr17_GL383563v3_alt 144353 1 + 375691 g s ponAbe2.chr17 35500 1 + 73212453 g i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 98250 1 - 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 66015 1 + 80904711 g i rheMac3.chr16 C 0 C 0 s macFas5.chr16 66475 1 + 80997621 g i macFas5.chr16 C 0 C 0 s papAnu2.chr16 76283 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 61713 1 + 75148670 g i chlSab2.chr16 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I e panTro4.chr17 138482 1 + 82630442 I a score=71243.000000 s hg38.chr17_GL383563v3_alt 144354 30 + 375691 gcgctgagatcaccgtagtgcaaacagcat s panTro4.chr17 138483 30 + 82630442 GCGCTGAGATCACTGTAGTGCAAACAGCAT i panTro4.chr17 I 1 C 0 s ponAbe2.chr17 35501 30 + 73212453 gcgctgagatcactgtagtgcaaacagcat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 98251 30 - 81552678 gcgctgagatcactgtagtgcaaacagcat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 66016 30 + 80904711 gccctgagatcactgtagtgcaaacagcgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 66476 30 + 80997621 gccctgagatcactgtagtgcaaacagcgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 76284 30 + 74645514 GCCCTGAGATCACTGTAACGCAAACAGCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 61714 30 + 75148670 gccctgagatcactgtagtgcaaacggcgt i chlSab2.chr16 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 883567 6 - 1291538 I a score=3448938.000000 s hg38.chr17_GL383563v3_alt 144384 1430 + 375691 caaatggaacatgacacacaactcctttggccgcccccTGAAAGTGTGGGGGATGCAGGGGTGGAAGGGAGCTTCACTCAGGgacctcctgcctcaacccctcactctgacctctgctctttcctctAAATTTTGTTCGTTTCTAACGTCTCTTTTGTGGCCTTGGCCCCGGGTTGAAATGTGCCCTTTAAA----------------AGCATttttcctaaacgaagacaattcctct---------------------ccaagaggagctgttccctccccagctgttcagaaaat-CCAGGTGTGTTTCCACCTGCAACAATGCCGAGCTGTCAGCTTAGACTTGGAAGGCGCTAAGAGCTGGGGAAGGCCACATTTGGGGTCTGGTTCCAGGCCTTGCGGGTCACCATCCCTGGCtgtattagtcctttcctgcactgctata---aagtacccaaggctgggtaattgataaagaaaagcaaagtaatgggctcacggttcctcaggctgtacaggaagcttgatgctggcatgtgctcagcttctgaggaggcctcaagaaacttacaatcatggcagaaggctaagggggagcaggcatgccacacggccagcgcagcagcaag-agagtgaggcgggaggtgctacccacttgtaaatggccgagctcgtgaggactca----ccaaggcggatggtgctcaaccagtcatgggaaaaccgcccccgtgatctagtcgcttcccaccaggcgccacctccaacgctgagggttacaattcgacatgacacgccgg-ggggacacagatccaaaccacgtcaTCAGCTCTTTCAGAGGGAGATGGCTCTGGACCCCACTTTAGAGTCTGGCTGATTTGCTCTCCCAGGTGCGCCTGGCACAGCTCTCAGGTTCTGCAGGAGCCGCTGGGCTTGGACGAAGGGCCCTCC----CGCAGTGTGAGGAGCCTGGCGACCTGGCCCGGTCTCACCCCACAGCCTAGGGCAGAGATGCcacaaagtcacagactttcagggccaagag-accctggagtgcgtctgactcggcctcgtgtttcacagggaatctgaggcccgcactggc-caagtgacctgtctgtacttacacactctggaggcagcagagtggagGAGAGTGGTGCTATGGC----CTGAGTGATTTATTTTAGAATAcagtcatgcattgtataacgaagtttgtcaatgacaggctgtatatccagcggtggtcccataagactacaaagcagctgaaaa-ttcccgttgcctagtgaggttgcggc--gtgtaatgtcacagtgcaacacgtta-tcactcgtttgtggtgacgctggtgtgaacacacctattacactgcc--agtcacatacgagtggacagtaatgccctgggccctcacactcaccacacactgactctcccacagcgactccagtcccgcaagctccattcacgggaagtg s panTro4.chr17 138513 1430 + 82630442 CAAATGGAACATGACACACAACTCCTTTGGCCGCCCCCTGAAAGTGTGGGGGATGCAGGGGTGGAAGGGAGCTTCACTCAGGGACCTCCTGCCTCAACCCCTCACTCTGACCTCTGCTCTTTCCTCTAAATTTTGTTCGTTTCTAACGTCTCTTTTGTGGCCTTGGCCCCGGATTGAAATGTGCCCTTTAAA----------------AGCATttttcctaaacgaagacaattcctct---------------------ccaagaggagctgttccctccccagctgttcagaaaat-CCAGGTGTGTTTCCACCTGCAACAATGCCGAGCTGTCAGCTTAGACTTGGAAGGCCGTAAGAGCTGGGGAAGGCCACATTTGGGGTCTGGTTCCAGGCCTTGCCGGTCACCATCCCTGGCtgtattagtcctttcttgcactgctata---aagtacccaaggctgggtaattggtaaagaaaagcaaagtaatgggctcacggttcctcaggctgtacaggaagcttgatgctggcatgtgctcagcttctgaggaggcctcaagaaacttacaatcatggcagaaggctaaggggaagcaggcatgccacacggtcagcgcagcagcaag-agagtgaggcgggaggtgctacccacttgtaaatggccgagctcgtgaggactca----ccaaggcggatggtgctcaaccagtcatgggaaaaccgcccccgagatctagtcgcttcccaccaggcaccacctccaacgctgagggttacaattggacatgacacgcggg-ggggacacagatccaaaccacgtcaTCAGCTCTTTCAGAGGGAGATGGCTCTGGACCCCAATTTAGAGTCCGGCTGATTTGCTCTCCCAGGTGCGCCTGGCACAGCTCTCAGGTTCTGCAGGAGCCGCTGGGCTTGGATGAAGGGCCCTCC----CGCAGGGTGAGGCGCCTGGCGACCTGGCCCGGTCTCACCCCACAGCCTAGGGCAGAGATGCcacaaagtcacagactttcagggcccagag-accctggagtgcgtctgactcgacctcgtgtttcacagggaatctgaggcccgcactggc-caagtgacctgtctgtacttacacactctggaggcagcagagtggagGAGAGTGGTGCTATGGC----CTGAGTGATTTATTTTAAAATAcagtcatgcattgtataacgaagtttgtcaatgacaggctgtatatccagcggtggtcccataagactacaaagcatctgaaaa-ttcccgttgcctagtgacgttgcggc--gtgtaatgccacagtgcaacgcgtta-tcccttgtttgtggtgacgccggtgtgaacacacctactacactgcc--agtcacatacgagtggacagtaatgccctgggccctcacactcaccacacactgactctcccacagcgactccagtcccacaagctccattcacgggaagtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 35531 1458 + 73212453 caaatggaacatgacacacaagtcctttggccGCCCCCTGAAAGTGTGGGGGATGCAAGGGTGGAAGGGAGCTTCACTCAGGGACCTCCTGCCTCAACTCCTCGCTCTGACCTCTGCTCTTTCCTTTAAATTCTGTTCGTTTCTAACGTCTCTTTTGTGGCCTTGGCCCCAGGTTGAAATGTGCCCTTTAAA----------------AGCATTTTTCCTAAACGAAGACAATTCCTCTCCAAGAGGAGCTGCTCCCTCCCCAAGAGGAGCTGCTCCCTCCCCAGCTGTTCAGAAATG-GCAGGTGTG-TTCTACCTGCAACAATGCTGAGCTATCAGCTTAGACTTGGAAGGCCCTAAGAGCTGGGGAAGGCCACATTTGGGGTCT-GTTCCAGGCCTTGCAGGTCACCATCCCTGGCtgtatcagtcctttcttgcactgctataaagaagtacccaaggctgggtaatttataaagaaaagcaatgtaatgggctcacggttcctcaggctgtacaggaagcttgatgttgccatgtgctcagcttctgaggaggcctcaagaaatttacaatcatggcagaaggcgaagggggagcaggcatgccacgctgtcggagcagcagcaagaagagtgaggcgggaggttctacccacttgtaaatggccgagcccgtgagaactca----tcaaggcggatggtgctaaaccagtcatgggaaaaccgcccccaagatctagtcgcttcccaccaggcgccacctccaacactgagggttacaattggacatgacatgtgggtggggacacagatccaaaccacatcaTCAGCTCTTTCAGAGGGAGATGGCTCTGGACCCCAA-TTAGAGTCTGGCTCATTTGCTCCCCCGGGTGGGCCTGGCACAGCTCTCAGGTTCTGCAGGAGCCGCTGGGCTTGGATGAAGGGCCCTCC----CCCAGTGTGAGGAGCCTGGCGACCTGGCCTGGTCTCACCCCATAGCCTAGGGCAGAGATGCcacaaagtcacagactttcagggccaagag-accctggagtgcatctgactcaatctcgtatttaacagggaatctgaggcccacactggc-caagtgacctgtctgtacttacacactctggaggcggc-gagtgcaggagagtggtgctctggcctatctgaGTGATTTATTTTAAAATAcagtcatgcattgtataacaaagtttgtcagtgacaggctgtatatccagcggtggtcccataagattacaaagcagctgaaaa-ttcccattgcctagtgatgttgcagctgtcgtaatgtcacagtgcaacacgtta-tcacttgtttgtggtgacgctggtgtaaacacacctactacactgcc--agtcacataagagtggacagtaacgtcctaggccctcacactcaccacacatcgactctcccacagcgactccagtcctgcaagctccattcatggtaagtg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 98281 1431 - 81552678 caaatggagcatgacacacaagtcctttggccgcccccTGAAAGTGTGGGGGATGCAGGGGTGGAAGGGAGCTTCACTCAGGGACCGCCTGCCTCAACTCCTGGCTCTGACCTCTGCTCTTTCCTCTAAATTTTGTTTGTTTCTAACGTCTCTTTTGTGGCCTTGGCCCCTGGTTGAAGTgtgccctttcaa----------------agcatttttcctaaacgacgacaattcctct---------------------ccaagaggagc-gttccctccccagctgttcagaaaatGGCAGGTGTG-TTCCACCTGCAACAATGCTGCTCTATCAGTTTAGACTCGGAAGGCCCTAAGGGCTGGGCAAGGCCACATTTGGGGTCT-GTTCCAGGCCTTGCGGGTCACCATCCCTGGCtgtattagtccattcttgcactgctataacgaagtacccaaggctgggcaatttataaagaaaagcaacgtaataggctcacggttcctgaggctgtacaggaagcttgatgttggcatgtgctcagcttctgaggaggccccaagaaactttcaatcatggcagaaggcgaagggggagcagacatgccacatggtcagagcagcagcaag-agagtgaggtgggaggtgctgcccacttgtaaatggcggagcccatgagaactca----ccaaggcggatggtgctaaatcagtcatgggaaaaccacccccgtgatctagtcacttcccaccaggcgccacctccaacgctgagggtcacaactggacatgacatgtgggtggggatacagatccaaaccacatcaTCAGCTCTTTCAGAGGGAGATGGCTCTGG-CCCCAGTTTAGAGTCCGGCTGATGTGCTCTCCCAGGAGTGCCTGGCACAGCTCTCAGGTCCTGCAGGAACCGCTGGGCTTGGATGAAGGGCCCTCC----CCCAGTGTCAGGAGCCTGGCCACCTGGCCTGGTTTCACCCCATAGCCTAGGGCAGAGATGCcacaaagtcacagactttcagggtcaagagaaccctggagagcatctgactcaacctcatatttaacagggaatctgaggcccacactggc-caagtgacctgtctgtacttacacactctggagccggcagagTGGAGGAGACTGGTGCTATGGCCTATCTGCGTGATTTATTTTAAAATATagtcatgcgttgtataacgaagtttgtcaatgacaggctgtatatccagcggtggtcccataagattacaaagcagctgaaaa-ttcccattgcctagtgaagttgcagct-gtgtaatgtcacagtgcaacacgtta-tcacttgtttgtggtgacgctggtgtaaacacacctactacactgcc--agtcacataagagtggacagtagtgt------ccctcacactcaccacacactgactgtcccacagcgactccagtcctgcaagctccattcacggtaagtg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 66046 1350 + 80904711 caaacggaacatgacacaCAAGTCCTCTGGCTGCCCCATCAAAGTGCGGGGGACGCAGGGGGG--AGGGAGCTTCACTCAGGGACCTCCTGCCTCAACTCCTCGCTCTGACCTCTGCACTTTCCTCTAAATTGTGTTCGTTTCTAATGTCT----------CTTGGCCCCTGGTTGAAATGTGCCTTTAAAATGGCTAATGACAAAGGAGC-TTTTTCCTGAACGAAGACACTTGCTTT---------------------CCAAGAGGAGCCGTTCCCTCCCCAGCTGCTCAGAAAACGGCAGGTGTG----------------------CTTATCGGTTCAGACGTGGAAGGC-CTACGAGCTGGGGAAGGCCACATCTGTGG-CT-GCTCCGGGCCTTGCAGGTCACCGT-CCTG------------------------gctgtaaagcagcacccaaggctgggtcatttataaagaaaagcagtgtaattggctcagggttcctcgggctgtacaggaagcttgatgttggcctgtactcagcttctgagga-gcctccagacacttacaatcacggcagaaggcgcagggggagcaggcacgccacgcggtcagagcagcagcaag-agactgagacgggaggcgctacacacgcgtcaacggccgagctggtgagaactta-----cagggcggacggcgctcaaccagtcatgagaaa-------------------------------------acctccaacactgagggctacacctgaacgtgacacgtggg-tggggcacagatccaagccacatcaGCAGCTCCTTCAGAGGGAGGTGGCTCCGGACCCCAGTTCAGAGTCTGGCCGATGCGCTCTCCCGGGTGTGCCTGGCACAGCTCTCAGGTTCTGCGGGAGCTGCTGGGCTTGGATGCAGGGCTCTCC----CCCAGTTCGAGGAGCCTGGCGACCTGGCCTGGTCTCACCCCATCGCCTAGGGCAGAGACACTCCaaagtcacagactttcagggccaagag-accctggagtgcgtctgactcaatcttggatttagcaggggatctgaggcccacactggcacaactgacctgtctgcacttacacattctgggggcagcagagcggagGAGAGGGGTGCT-TGGCCTAGCTGCGTGATTTAGTTTAAAACATagtcatgcaccgtataacgaagtttgtcggtgacaggctgtatatccagcggtggtcccataagattacaaaggagctgaaaa-ttcccattgcctagtgatgttgcagctcttgtaatgtcacggtgcaacacgcta-tcccttgtttgtggtgatgctggtgt----aaacctactacactgcc--agccacataagagtggacagtaatgtcctaggccctcacacccaccacacactgactctcccacagcgactccagtcctgcaagctccgttcacggtaagtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 66506 1342 + 80997621 caaacggaacacgacacaCGAGTCCTCTGGCTGCCCCATCAAAGTGCGGGGGACGCGGGGGGG--AGGGAGCTTCACTCAGGGACCTCCTGCCTCAACTCCTCGCTCTGACCTCTGCACTTTCCTCTAAATTGTGTTCGTTTCTAATGTCT----------CTTGGCCCCTGGTTGAAATGTGCCTTTAAAATGGCTAATGACAAAGGAGC-TTTTTCCTGAACGAAGACACTTGCTTT---------------------CCAAGAGGAGCCGTTCCCTCCCCAGCTGCTCAGAAAACGGCAGGTGTG----------------------CTTATCGGTTCAGACGTGGAAGGC-CTACGAGCTGGGGAAGGCCACATCTGTGG-CT-GCTCCGGGCCTTGCAGGTCACCGT-CCTG------------------------gctgtaaagcagcacccaaggctgggtcatttataaagaaaagcagtgtaattggctcagggttcctcgggctgtacaggaagcttgatgttggcctgtactcagcttctgagga-gcctccagacacttacaatcacggcagaaggcgcagggggagcaggcacgccacgcggtcagagcagcagcaag-agactgagacgggaggcgctacacacgcgtaaacggccgagctggtgagaactta-----caaggcggacggcgctcaaccagtcatgagaaa-------------------------------------acctccaacactgagggctacacctgaacgtgacacgtggg-tggggcacagatccaagccacatcaGCAGCTCCTTCAGAGGGAGGTGGCTCCGGACCCCAGTTCAGAGTCTGGCCGATGTGCTCTCCCGGGTGTGCCTGGCACAGCTCTCAGGTTCTGCGGGAGCTGCTGGGCTTGGATGCAGGGCTCTCC----CCCAGTTCGAGGAGCCTGGCGACCTGGCCTGGTCTCACCCCATCGCCTAGGGCAGAGACGCTCCaaagtcacagactttcagggccaagag-accctggagtgcgtctgactcaatcttggatttagcaggggatctgaggcc--------cacaactgacctgtctgcacttacacattctggaggcggcagagcggagGAGAGGGGTGCT-TGGCCTAGCTGCGTGATTTAGTTTAAAACATagtcatgcaccgtataacgaagtttgtcggtgacaggctgtatatccagcggtggtcccataagattacaaaggagctgaaaa-ttcccattgcctagtgatgttgcagttcttgtaatgtcacgatgcaacacgcta-tcccttgtttgtggtgatgctggtgt----aaacctactacactgcc--agccacataagagtggacagtaatgtcctaggccctcacacccaccacacactgactctcccacagcgactccagtcctgcaagctccgttcacggtaagtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 76314 1376 + 74645514 CAAACGGAACATGACACACAAGTCCTCTGGCCGCCCCATCAAAGTGCGGGGGACGCAgggggggAAGGGAGCTTCACTCAGGGACCTCCTGCCTCAACTCCTCGCTCTGACCTCTGCGCTTTCCTCTAAATTGTGTTTGTTTCTAATGTCT----------CTTGGCCCCTGGTTGAAATGTGCCTTTAAAGTGGCTAATGACAAAGGAGC-TTTTTCCTGAACGAAGACACTTGCTTT---------------------CCAAGAGGAGCCGTTCCCTCCCCAGCTGCTCAGAAAACGGCAGGTGTG----------------------CTTATCGGTTCAGACGTGGAGGGCGCTACGAGCTGGGGAAGGACACATCTGTGG-CT-GCTCCAGGCCTTGCAGGTCACCGT-CCTGGCTGTATTAGTCCTTTCctgcactgctgtaaagaagcACCCAaggctgggtcatttataaagaaaagcaacgTAATTGGCTCAGGGTTCCTCGGGCTGTACAGGAAGCTTGATGTTGGCCTGTACTGAGCTTCTGAGGA-GCCTCCAGacacttacaatcacggcag-aggcgaagggggagcaggcacgcCACGCGGTCAGAGCAGCAGcaag-agactgaggcgggaggcgCTACACACGCGTAAACGGCCAAGCTGGTGAGAACTTA-----CAAGGCGGACGGTGCTCAACCAGTCATGAGAAA-------------------------------------ACCTCCAACACTGAGGGCTACACCTGAACGTGACACGTGGG-TGGGGCACAGATCCAAGCCACGTCAGCAGCTCCTTCAGAGGGAGGTGGCTCCGGATCCCAGTTCAGAGTCTGGCCGATGTGCTCTCCCGGGTGTGCCTGGCACAGCTCTCAGGTTCTGCGGGAGCTGCTGGGCTTGGATGCAGGGCTCTCC----CCCAGTTTGAGAAGCCTGGCGACCTGGCCTGGTCTCACCCCATCGCCTAGGGCAGAGACGTCCCGAAGTCACAGACTTTCAGGGCCAAGAG-ACCCTGGAGTGCGTCTGACTCAATCTTGGATTTAGCA-GGGATCTGAGGCGCATATTGGCACAAGTGACCTGTCTGAACTTACACAGTCTGGAGGCGGCAGAGCGGAGGAGAGGGGTGCTGTGGCCTAGCTGCGTGATTTAGTTTAAAACATAGTCATGCACCGTATAACGAAGTTTGTCGGTGACCGGCTGTATATCCAgcggtggtcccataagattacaaaGGAGCTGAAAA-TTCCCATTGCCTAGTGGTGTAGCAGCTCTTGTAATGTCACGGTGCAACACGCTA-TCCcttgtttgtggtgatgctgctgT----AAACCTACTACACTGCC--AGCCACATAAGAGTggacagtaatgtcctaggccctCACACCCACCACACACTGACTCTCCCACAGCGACTCCAGTCCTGCAGGCTCCGTTCACGGTAAGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 61744 1376 + 75148670 caaacggaacatgacacaCAAGTCCTGTAGTCACCCCATCAAAGTGTGGGGGACGCAAGGGGG--AGGGAGCTTCACTCAGGGACCTCCTGCCTCAACTCCTCGCTCTGACCTCTGCGCTTTCCTCTAAATTGTGTTCGTTTCTAATGTCT----------CTTGGCCCCTGGTTGAAATGTGCCTTTAAAATGGCTAATGGCAAGGGAGC-TTTTTCCTAAACGAAGACACTTGCTTT---------------------CCAAGAGGAGCCGTTCCCTCCCCAGCTGCTCAGAAAACGGCAGGTGTG----------------------CTTATCGGTTCAGACGTGGAGGCC-CTACGAGCTGGGGAAGGCCACATCTGTGG-CT-GCTCCAGGCCTTGCAGGTCACCGTCCCTGGCtgtattggtcctgcact-----gctgtaaagaagcacccgaggctgggtcatttataaagaaaagcagtgtaattggctcacggttcctcgggctgtacaggaagcctgatgttggcctgtactcagcttctgagga-gcctccagacacttacagtcacggcagaaggcgaagggggagcaggcacgccacgcggtcagagcagcagcaag-agactgaggcgggaggcgctacacgcgcgtaaacggccgagctggtgagaacttc-----caaggcggacggtgctaaaccagtcatgagaaa-------------------------------------acctccaacactgacggctacacctgaacgggacacgtggg-tggggcacagatccaagccacatcaGCAGCTCCTTCAGAGGGAGGTGGCTCCGGACCCCAGTTCAGAGTCTGGCCGATGTGCTCTCCCAGGTGTGCCTGGCACAG--CTCAGGTTCTGTGGGAGCTGCTGGGCTTGGATGAAGGGCTCTCCCCTGCCCAGTTTGAGGAGCCTGGCGACCTGGCCTGGTCTCACCCCATCGCCTAGGGCAGAGACGCTCCaaagtcacagactttcagggccaagag-accctggagtgcgcctgactcaatcttggatttagcagggaatctgaggcccacattggcacaactgacctgtctgcacttacacactctggaggcggcagagcagagGAGGGGGGTGCT-TGGCCCAGCTGCGTGATTTAGTTTAAAACAcagtcatgcaccgtataacgaagtttgtcggtgacaggctgtatatccagcgggggtcccataagattacaaaggagctgaaaa-ttcccattgcctagtgatgttgcagctcttgtaatgtcacggtgcaacacgcta-tcccttgtttgtggtgatgctggtgtaaacaaacctgctacactgcc--agtcacataagagtggacagtaatgacctaggccctcacacccaccacacactgactctcccacagcgactccagtcctgcgagctccgttcacggtaagtg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 883573 1371 - 1291538 CCAATGGAACGTGACCTACAAGCCCTTTA--CACTCCTTCAAAGTGTGTGGGATGCAGGGGTGAACAGCAGCTTCTCTCAGCGGCCTTCTGCTTCACCTCC--ACTCTGACCTCTGCTCTTCCCTCTAAATTCTGTTCGTTTTCAAAGTCTCTTTTGTGGCCTTGGCCCCTAGTTGAAATGTGTCCTTTAAA----------------AGCATTTTTCCTAAATGAAGACACTTCCTCC---------------------CC-AGAGGAACTGTCCCCTCCGCAGCTGTTGAGGAAATAGCAGGTGTG-TTCCACCTGCTGCGACACTGAGTTA-CTGTTTAGACTTAGAAGGCCCTAAGAGCTGCGAAG----ACCCCTGGGATCT-GTTCCAGGCCCTGCAGGTCACCATCCCTGGCtgcaataaccctttcttgcattgctatcaagaggtacccaagactgggtaatttataaagaaaagcaatttaattggctcacggttcctcaggctgtacaggaagcttgatgttggcatgtgctcagcttctgaggaggcctcaagaca----caatcctggcagaaggccaaggaggagcaagcatgtctcatggtcgg---agcagcgag-agagtcgg--gggaggttctacacacttttaaatggccaatctcatgagaactcactcaccaagg-ggatgctgctaaaccaatcatgagaaaaccgcccccaagatctaggcacctcccagcaggccccacctccaacaccagggatcagagttgaacctgagatttggg--ggaacacagaCTGA-----------------------AGGGAGATGGCTCTGGACCCCAATTCAGAGTCTGGCTGATG-GCTCTCCCGTGTGTGC-------------------CTGCAGGAGCTGCTGGGCTTGGATGAGGGGCTCTCC----CC--ATGTGAGGAGCCTGGCGACCTG----GGTGTCA-CCCACAGCCTAGGGCAGAGATGCcacaaaggcacagactttcagggccaggag-accgtggagtgcacctggcccaaccttgcacttaacagggactctgaggcaca-actagc-caagtgacCCATGTGTCCTTACAC--TGTGGCAGCAGAAGAGCAGAGGGGAGTGCTGCTGTGGCATACCTGAGCAATGCATTTTAAGACAcagtcatgccttgtagaataaaacttgtcagtgacagcctgtctactcggcagtggtcccataagattgcaaaggagctgaaaagttcctaccacctagcaatgctatagctgctgtaatgtcacagtgcaacatgttactcacttgtttgtggtgatgctggtgtaaacaaaccta-tacagtgccagagtcacacaaaagtgtacagcaatgtcctccaccctcacactcaccacacattgacttaccccaagccacgccaggcctgcaagctctattcatggtacgtg i calJac3.chrUn_GL286409 I 6 I 313 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I a score=1382029.000000 s hg38.chr17_GL383563v3_alt 145814 582 + 375691 ctctatacacctgtgtcattttaaaacatcttttataccgtatttttactgtaccctttctatgattagctacacacataattccacggtgtcgcagttgct------------------acatgctgcacaggtttgtagcccaggagcc-caggctctcccacatagcctaggtgtgctgtaggttctgccacttagatttacgtccgtgctctctatgatgtctgcacaatgatgaaattgcctgacaacacatctcttggaagtatccctgtcgtatcctggttgttaggtgacacatgcctgTACTTCTGTGTGAATGAGTTTGAGTAAGATCTCATCTGCACACACATTAAGGGCTGGCTA------------------------------------------------------GCCTTATTAGCATAAGGAATGTGGCAGTGGGttttctttcattta-tttactgtttttgaatagggtcttgttttgttacccaggctgagtgcagtggcgagatcatggctcactacagcctccaacttctgtgctcaagcaatcctcctgcctcagcctcccaagtagctgggactacagCTATAGTGATTTTGATAGGGGGGGAATTTGTTGGGGGTCACTGAGGCGGGCTGG s panTro4.chr17 139943 632 + 82630442 ctctatacacctgtgccattttaaaacatcttttatgccgtatttttactgtaccctttctatgattagctacacacataattccacggtgtcgcagttgct------------------acatgctgcacaggtttgtagcccaggagcc-caggctctcccacgtagcctcggtgtgctgtaggctctgccacttagatttacgtccgtg----ctatcatgtctgcacaatgatgaaattgcctgacaacacatttcttggaagtatccctgtcgtatcctggttgttacgtgacacatgCCCGTACTTCTGTGTGAATGAGTTTGAGTAAGATCTCATCTGCACACACATCAAGGGCTGGCTAATTAACATGCCCAGTAAATCAGTTAATCCTCATCTGTAGAAACACTGTAGGGTTGCCGTATTAGCATAAGGAATGTGGCAGTGGGttttctttcattta-tttactgtttttgaatagggtcttgttttgttacccaggctgagtgcagtggcaagatcatggctcactacagcctccaacttctgtgctcaagcaatcctcctgcctcagcctcccaagtagctgggactacagCTATAGTGATTTTGATAGGGGGGGAATTTGTTGGGGGTCACTGAGGCGGGCTGG i panTro4.chr17 C 0 I 519 s ponAbe2.chr17 36989 654 + 73212453 ctctatacacctgtgccattttaaaaaatcttttataccgcatttttactgcaccttttctatgattagctaaacacatgattccactgcgttgcagttgctacagtattcagtacagtcacatgctgtacaggtttgtagcccaggagccacaggttctcccacatagcctaggtgtgctgtaggctctgccatttagatttacgtctgtgctctctatgatgtctgcacaatgatgaaatcgcctgaagacacatttcttggaagtatccctgtcgtatcctggttgttaggtgacacatgcctATACTTCTGTGTGAATGAGTTTGAGTAAGATCTAATCTGCACACACATTAAGGGCTGGCTAATTAACAAGTCAAGTAAATCAGCTAATCCTCATCTGTAAAAACACTTTAGGGTTGCCTTATTAGCATAAGGAATGTGGCAGTGAGtttgctttcattta-tttactttttttgaatagggtcttgttttgttacccaggctgagtgcagtggtgagatcatggctcactacagcctccaacttctgtgctcaagcaatcctcctgcctcagcctcccaagtagctgggactacagCTATAGTGATTTTGATA-GGGGGGAATTTGTTGGGGGTCACTGAGGCAGGCTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 99712 649 - 81552678 ctctatacacctgtgccattttaaaaaatcttttataccgtatttttactgtaccttttctatgattagctacacacgtaattccactgtgttgcagttgct-----attcagtacagtcacatgctgtacaggtttgtagcccaggagccacaggctctcccgcatagcctagctgtgctgtaggctctgccatttagatttacgtccgtgctctctatgatgtctgcacaatgatgaagtcacctgacgacacatttcttggaagtacccctgtcgtatcctggttgttaggtgacacacgcctgTACTTCTGTGTAAATGAGTGTGAGTAAGATCTAATCTGCACACACATTAAGGGCTGGCTAATTAACATGTCAAGTAAATCAGTTAATCCTCATCTATAAAAACACTTTAGGGTT-CCTCATTAGCATGAGGAATGTGGCAGTGGGttttctttcattta-tttactttttttgaagaggatcttgttttgttacccaggctgagtgtagaggcgagatcatggctcactacagcctccaacttctgtgctcaagcaatcctcctgcctcagcctcccaagtagctgggactacagCTGTAGTGATTTTGACAGGGGGGGAATTTGTTGGGGGTCACTGAGGTGGGCTGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 67396 643 + 80904711 ctctacacacctgtgccatttgaaaatatcttttatgccgtatttttactgtaccttttctatggttagctacacacataattccactgtgttgcagttgctgcagtattcagtc-----acatgctgtacaggtttgtaacccgagagccataggccctcccccacagcctaggtgtgccgtaggctctgccatgtagatttacgtccgtgccctctatgatgtctgcacaatgatgagatcgcctgatgacacatttcttggaagtaaccccgtcgtatcctggttgttaggtgacacgtgcctgTACTTCTGTGTGAATGAGTGTGAGTGAGATCTAACCTGCACACACATTAAGGGCTGGCTAATTAACATGTCAAGTAAATCAGTTAATCCTCATCCGTACAAACACTTTATGGTTGTCTTATTAGCACAAGGAACGTGA------Gttttctttcattca-tttcctttttttgaatagggtctcgttttgttacccaggctgagtgcagaggcgagatcacggctcactgcagcctccaacttctgggctcaagcaatcctcctgcctcagcctcccaagtagctggggctacagCTGTAGTGATTTTGATGGGGGGGGAGTTCGTTGGGGGTCACTGAGGCAGGCTG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 67848 643 + 80997621 ctctacacacctgtgccattttaaaatatcttttatgccgtatttttactgtaccttttctatggttagctacacacataattccactgtgttgcagttgctgcagtattcagtc-----acatgctgtacaggtttgtaacccgagagccataggccctcccccacagcctaggtgtgccgtgggctctgccatgtagatttacgtccgtgccctctatgatgtctgcacaatgatgagatcgcctgatgacacatttcttggaagtaaccccgtcgtatcctggttgttaggtgacacgtgcctgTACTTCTGTGTGAATGAGTGTGAGTGAGATCTAACCTGCACACACATTAAGGGCTGGCTAATTAACATGTCAAGTAAATCAGTTAATCCTCATCCGCACAAACACTTTATGGTTGTCTTATTAGCACAAGGAACGTGA------Gttttctttcattca-tttcctttttttgaatagggtctcgttttgttacccaggctgagtgcagaggcgagatcacggctcaccgcagcctccaacttctgtgctcaagcaatcctcctgcctcagcctcccaagtagctggggctacagCTGTAGTGATTTTGATGGGGGGGGAGTTCGTTGGGGGTCACTGAGGCAGGCTG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 77690 640 + 74645514 CTGTACACACCTgtgccattttaaaatatcttttatgccgtatttttactgtaccttttctatggtTAGCTACACACATAATTCCACTGTGTTGCAGTTGCTGCAGTGttcagtc-----acatgctgtacaggtttgtaacccGAGAGCCATAGGCTCTCCCCCACAGCCTAGGTGTGCTGTAGGCTCTGCCATGTAGATTTACGTCCGTGCCCTCTATGATGTCTGCACAATAATGAAATCGCCTGATGACACATTTCTTGGAAGTATCCCCATCGTACCCTGGTT-TtaggtgacacgtgcctgtactTCTGTGCGAATGAGTGTGAGTGAGATCTAACCTGCACACACATTAAGGGCTGGCTAATTAACATGTCAAGTAAATCAGTTAATCCTCATCCGTACAAACACTTTAGGGTTGTCTTATTAGCAAAAGGAATGTga------gttttctttcattca-tttcctttttttgaatagggtcttgttttgttacccaggctgagtgcagaggcgagatcacggctcactgctgcctccaacttctgtgctcaagcaatcctcctgcctcagcctcccaagtagctggggctacaggtgtagTGATTTTGAT--GGGGGGAGTTCGTTGGGGGTCACTGAGGCAGGCTG- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 63120 628 + 75148670 ctctacacacctgtgccattttaaaatatcttttatgccgtatttttactgtaccttttctgtggttagctacacacacaattccactgc------gttgctgcagtattcagtc-----acatgctgcacaggtttgtaacccaggagccataggctctcccccacagcctaggtgtgccgtaggctctgccatgtagatttacgtccatgccctctatgatgtctgcacaatgataaactcacctgatgacacatttcttggaagtatccccgtcgtATCCTGGTTGTTAGGTTACACATTCCTGTGCTTCTGTGTGAATGAGTGTGAGTGAGATCTCACCTGCACACACATTAAGGGCTGGTTAATTAACATGTCAGGTAGATCAGTTCATCCTCATCTGTAAAAACACTTTAGGGTTGTCTCATTAGCATAAGGAATGTGG---------------CAGTGAGttttctttttttgaatagggtctcgttttgttacccaggctgagtgcagtggcgagatcacggctcactgcagcctccaacttctgtgctcaagcaatcctcctgcctcagcctcccaagtagctggggctacagCTGTAGTGATTTTGAT-GGGGGGGAGTTCGTTGGGGGTCACTGAGGCAGGCTG- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I a score=46149.000000 s hg38.chr17_GL383563v3_alt 146396 20 + 375691 GGCACACAGACCAGGGCTCC s panTro4.chr17 141094 20 + 82630442 GGCACACAGACCAGGGCTCC i panTro4.chr17 I 519 C 0 s ponAbe2.chr17 37643 18 + 73212453 GGCACACAGAC--AGGCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 100361 20 - 81552678 GGCACACAGACCTAGGCTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68039 20 + 80904711 GGCACACAGACCAGGGCTCC i rheMac3.chr16 C 0 I 241 s macFas5.chr16 68491 20 + 80997621 GGCACACAGACCAGGGCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 78330 20 + 74645514 GGCACACAGACCAGGGCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 63748 20 + 75148670 GGCACACAGACCAGGGCTCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I a score=15503.000000 s hg38.chr17_GL383563v3_alt 146416 11 + 375691 CCACGAGGGCC s panTro4.chr17 141114 11 + 82630442 CCACGAGGGCC i panTro4.chr17 C 0 I 1 s ponAbe2.chr17 37661 11 + 73212453 GCACAAGGGCC i ponAbe2.chr17 C 0 I 1 s nomLeu3.chr19 100381 11 - 81552678 GCACAAGGGCC i nomLeu3.chr19 C 0 I 190 s macFas5.chr16 68511 11 + 80997621 GCACAAGCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 78350 11 + 74645514 GCACAAGCACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 63768 11 + 75148670 GCACAAGGGCC i chlSab2.chr16 C 0 I 217 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e rheMac3.chr16 68059 241 + 80904711 I a score=910.000000 s hg38.chr17_GL383563v3_alt 146427 1 + 375691 T s panTro4.chr17 141126 1 + 82630442 T i panTro4.chr17 I 1 C 0 s ponAbe2.chr17 37673 1 + 73212453 T i ponAbe2.chr17 I 1 C 0 s macFas5.chr16 68522 1 + 80997621 T i macFas5.chr16 C 0 I 229 s papAnu2.chr16 78361 1 + 74645514 T i papAnu2.chr16 C 0 I 228 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 63779 217 + 75148670 I e rheMac3.chr16 68059 241 + 80904711 I e nomLeu3.chr19 100392 190 - 81552678 I a score=6716.000000 s hg38.chr17_GL383563v3_alt 146428 31 + 375691 CTGAGGCACACAGACCAGGGCTCCACACAAG s panTro4.chr17 141127 31 + 82630442 CTGAGGCACACAGACCAGGGCTGCACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 37674 30 + 73212453 CTGAGGCACACAGACCA-GGCTCTGCACGAG i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75814165 1409 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 63779 217 + 75148670 I e papAnu2.chr16 78362 228 + 74645514 I e rheMac3.chr16 68059 241 + 80904711 I e macFas5.chr16 68523 229 + 80997621 I e nomLeu3.chr19 100392 190 - 81552678 I a score=7477.000000 s hg38.chr17_GL383563v3_alt 146459 27 + 375691 GGCCCTCTGAGGTACGCAGACCAGGCT--- s panTro4.chr17 141158 27 + 82630442 GGCCCTCTGAGGTACGCAGACCAGGCT--- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 37704 27 + 73212453 GGCCCTCTGGGGCACACTGACCAGGCT--- i ponAbe2.chr17 C 0 I 207 s mm10.chr11 75815574 30 + 122082543 GGCTCACTGAGGCCAAGGGACTAAGTCTTT i mm10.chr11 I 1409 C 0 e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 63779 217 + 75148670 I e papAnu2.chr16 78362 228 + 74645514 I e rheMac3.chr16 68059 241 + 80904711 I e macFas5.chr16 68523 229 + 80997621 I e nomLeu3.chr19 100392 190 - 81552678 I a score=876.000000 s hg38.chr17_GL383563v3_alt 146486 10 + 375691 GAGGCACAGA s panTro4.chr17 141185 10 + 82630442 GGGGCACAGA i panTro4.chr17 C 0 C 0 s mm10.chr11 75815604 10 + 122082543 AATGCCCATG i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 63779 217 + 75148670 I e papAnu2.chr16 78362 228 + 74645514 I e rheMac3.chr16 68059 241 + 80904711 I e macFas5.chr16 68523 229 + 80997621 I e nomLeu3.chr19 100392 190 - 81552678 I e ponAbe2.chr17 37731 207 + 73212453 I a score=-1986.000000 s hg38.chr17_GL383563v3_alt 146496 9 + 375691 GACCAGGGC---- s panTro4.chr17 141195 4 + 82630442 GACC--------- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 100582 9 - 81552678 GGCCGGGCT---- i nomLeu3.chr19 I 190 C 0 s mm10.chr11 75815614 9 + 122082543 ----GAGCTTTCT i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 63779 217 + 75148670 I e papAnu2.chr16 78362 228 + 74645514 I e rheMac3.chr16 68059 241 + 80904711 I e macFas5.chr16 68523 229 + 80997621 I e ponAbe2.chr17 37731 207 + 73212453 I a score=746685.000000 s hg38.chr17_GL383563v3_alt 146505 326 + 375691 TCAAGAGCTGCTCTGCCCAGGATTCCTGTGGCTGC-----------TGTGAACTGAGTGCTCCT--GGCCGAGGACCCACAGCTTCTGGGAAGTGTAGGTTGGGGCTCCTGATCTGCTGGCCCCTCCCTAGGGATGCAGAGCACACAGGCCCTGGGCCTGGA-------GTGTTtccatccatccacacatccttcttcccatcaggacactggtccatcctctg---------ttcatctgtccatcctctcagatgtccttcagca----------------------------------------------------------------cattggtccatgcagaatgtctatgcacctgtctctccatccatctgtccaatgctccatcagtctgtccatcatccatcctcccat s panTro4.chr17 141199 309 + 82630442 -----------------CAGGATTCCTGTGGCTGC-----------TGTGAACTGAGTGCTCCT--GGCCGAGGACCCACAGCTTCTGGGAAGTGTAGGTTGGGGCTCCTGATCTGCTGGCCCCTCCCTAGGGATGCAGAGCACACAGGCCCTGGGCCTGGA-------GTGTTTCCATCCATCCACACATCCTTCTTCCCATCAGGACACTGGTCCACCCTCTG---------TTCATCTGTCCATCCTCTCAGATGTCCTTCAGCA----------------------------------------------------------------CATTGGTCCATGCAGAATATCTATGCACCTGTCTGtccatccatctgtccaatgctccatcagtctgtccatcacccatcctcccat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 37938 390 + 73212453 TCAAGAGCTGCTCTGCCCAGGATTCCTGTGGCTGC-----------TTTGAACTGAGTGTCCCT--GGCCGAGGACCCACAGCTTGGGGGAAGTGTAGGTTGGGGCTCCCGATCTGCTGGCCCCTCCCTAGGGATGCAGAGCACACAGGCCCTGGGCCTGGA-------GTGTTTCCATCCATCCACGCATCCTTCTTCCCATCAGGACAGCAGTCCATCCTCTG---------TTCATCTGTCCATCGTCTCAGATGTCCTTCAGCAATCGGTCCATGCAGAATATCTATATCCTCTGTTCATCTGTCCATCGTCTCAGATGTCCTTCAGCAATCGGTCCATGCAGAATATCTATGCACCTGTCTCtccatccatctgtccaatgatccatcagtctgtccaccatccatcctcccat i ponAbe2.chr17 I 207 C 0 s nomLeu3.chr19 100591 326 - 81552678 TCAAGAGCTACTCTGCCCAGGATTCCTGTGGCTGC-----------TTTGAACTGAGTGCCCCT--GGCCACAGACCCACAGCTTGTGGGAAGTGTAGGTTGGGGCTCCTGATCTGCTGGCCCCTCCCTAGGGATGCAGAGCACACGGGCCCTGGGCCTGGA-------GTGTTtccatccatccacgcatccttcttcccatcaggacagcggtccatcctctg---------ttcatctatccatcctctcggatgtccttcagca----------------------------------------------------------------cattggtccatgcagaatatctatgcacctgtctctccatccatctgtcctatgctccatcagtctgtccatcacccatcctcccat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68300 305 + 80904711 TCAAGAGCTGCTCTGCCCAGGATTCCTGTGGCAAC-----------TTTGAATTCAGCGCCCCT--GGCTGAGGACCCACAGCTTGTGGGAACTGTGGGTTGGGGCTCCTGGTCTGTGG---------------------GCACACGGGCCCTGGGCCTGCA-------GTGTTTCCATCCATCCACACATCCTTCGTCCCATCAGGACAGCAGTCCATCCTCTG---------CTCACGTGTCCATCCTCTCAGACGTCCTTCAGCA----------------------------------------------------------------CATTGGTCCCTGCAGAATatctatgcacctgtctctccatccgtctgtccagtgctccattagtctgtccatcatccatcctcccat i rheMac3.chr16 I 241 C 0 s macFas5.chr16 68752 301 + 80997621 TCAAGAGCTGCTCTGCCCAGGATTCCTGTGGCAAC-----------TTTGAATTCAGCGCCCCT--GGCCGAGGACCCACAGCTTGTGGGAACTGTGGGTTGGGGCTCCTGGTCTGTGG---------------------GCACACGGGCCCTGGGCCTGCA-------GTGTTTCCATCCATCCACACATCCTTCGTCCCATCAGGACAGCGGTCCATCCTCTG---------CTCACGTGTCCGTCCTCTCAGACGTCCTTCAGCA----------------------------------------------------------------CATTGGTCCCTGCAGAATATCTATGCACCTGTCTctccatccgtctgtccagtgctccatta----gtccatcatccatcctcccat i macFas5.chr16 I 229 C 0 s papAnu2.chr16 78590 326 + 74645514 TCAAGAGCTGCTCTGCCCAGGATTCCTGTGGCAAC-----------TTTGAATTCAGCACCCCT--GGCCGAGGACCCACAGCTTGTGGGAACTGTGGGTTGGGGCTCCTGGTCTGCGGGCCCCTCCCTAGGGATGCAGAGCACACGGGCCCTGGCACTGCA-------GTGtttccatccatccacacatcctTCGTCCCATCAGGACAGCGGTCCATCCTCTG---------CTCACGTGTCCATCCTCTCAGACGTCCTTCAGCA----------------------------------------------------------------CGTTGGTCCCTGCAGAATATCTATGCACCTGTCTCTCCGTCCGTCTGTCCAGTGCTCCATTAGTCTGTCCATCATCCATCCTCCCAT i papAnu2.chr16 I 228 C 0 s chlSab2.chr16 63996 326 + 75148670 TCAAGAGCTGCTCTGCCCAGTATTCCTGTAGCAAC-----------TTTGAATTCAGCGCCCCT--GGCCGAGGACCCACAGCTTGTGGGAACTGTGGGTTGGGGCTCCTGGTCTGCGGGCCCCTCCCTAGGGATGCAGAGCACATGGGCCCTGGCACTACA-------GTGTTTCCATCCATCCACACATCCTTTGTCCCATCAGGACAGCGGTCCATCCTCTG---------TTCACATGTCCATCCTCTCAGACGTCCTTCAGCA----------------------------------------------------------------CATTGGTCCCTACAGAATatctatgcacctgtccctccatccgtctgtccagtgctccattagtctgtccatcatccatcctccNAT i chlSab2.chr16 I 217 I 5446 s mm10.chr11 75815623 326 + 122082543 TCAAGACCAGCTCT--------TTCTTGGGGCTACTTTTGGATTTTTTTGAATTCAGTGAACCTAGGACTGGGGATCCAGAGCTTATGGGAAGTGCAGGTTAGGGCTTACAATCT---GGCTTTCCCCTAGACGTG----GTAAACAG---CTTGGCCAGCATGTGGGCGTTTTTCTGTTGGTCTACACATCTGTCTGTGCATT----CACCCTTCCTTCCAATGGGATGACATTTCTCCTGTCTATTCTCTCAGATGTCTGTCAGTG----------------------------------------------------------------CACTGGTTTACACAAAATATCCAC-CACGGTTCTCTTCATCCATCTGCTCAATG-----TTGGTC-ACTTGTCATCCATCCAGCCAT i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I a score=8051.000000 s hg38.chr17_GL383563v3_alt 146831 9 + 375691 -ctgtcctcc s panTro4.chr17 141508 9 + 82630442 -ctatcctcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38328 9 + 73212453 -ctctcctcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 100917 7 - 81552678 -ctgtcct-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68605 9 + 80904711 -ctatccccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 69053 9 + 80997621 -ctatccccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 78916 9 + 74645514 -Ctatccccc i papAnu2.chr16 C 0 C 0 s mm10.chr11 75815949 9 + 122082543 ATTTTTTTC- i mm10.chr11 C 0 I 758 e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 64322 5446 + 75148670 I a score=19643.000000 s hg38.chr17_GL383563v3_alt 146840 12 + 375691 acccacccaccc s panTro4.chr17 141517 12 + 82630442 atccacccaccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38337 12 + 73212453 acccacccaccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 100924 10 - 81552678 --ccacccaccc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68614 12 + 80904711 agccacccaccc i rheMac3.chr16 C 0 I 74 s macFas5.chr16 69062 12 + 80997621 agccacccaccc i macFas5.chr16 C 0 I 4 s papAnu2.chr16 78925 12 + 74645514 agccccccaccc i papAnu2.chr16 C 0 I 4 e mm10.chr11 75815958 758 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 64322 5446 + 75148670 I a score=22390.000000 s hg38.chr17_GL383563v3_alt 146852 16 + 375691 ccaccatcccccaccc s panTro4.chr17 141529 16 + 82630442 CCAACATCCCCCACCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38349 16 + 73212453 ccaccatcccccaccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 100934 16 - 81552678 ccaccatcccccaccc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 69078 16 + 80997621 ccaccatcccccaccc i macFas5.chr16 I 4 C 0 s papAnu2.chr16 78941 16 + 74645514 ccaccatcccccaccc i papAnu2.chr16 I 4 C 0 e mm10.chr11 75815958 758 + 122082543 I e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 64322 5446 + 75148670 I e rheMac3.chr16 68626 74 + 80904711 I a score=86428.000000 s hg38.chr17_GL383563v3_alt 146868 72 + 375691 aatcatcatccatccaactaccccctatgcccccactcacccttc-ccccacccagccatccgttaacccatc s panTro4.chr17 141545 72 + 82630442 AATCACCATCCATCCAACTACCCCCTATGCCcccactcacccttc-ccccacccagccatccgttaacccatc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38365 71 + 73212453 aatcatcatccatccatccacccCCTATGCCCCCG-TCACCCTTC-CCCCACCCAGCCATCCGTTAACCCCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 100950 72 - 81552678 aatcatcatccatccaaccaccccctatgcccccactcacccttc-ccccacccagccatccgttaacccatc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 69094 69 + 80997621 aat---catccatccaaccaccctcgatgcccccactcacccttc-cccaacccatccatccGTTAACCCACC i macFas5.chr16 C 0 M 350 s papAnu2.chr16 78957 69 + 74645514 aat---catccatccaaccacccccgatgcccccactcacgcttc-cccaacccatccatccgctaacccatc i papAnu2.chr16 C 0 C 0 s mm10.chr11 75816716 73 + 122082543 aagcacaatcagtgctcttaacccttaagccatctctctaCCTTCACCCCATCcctcctcctcctcctcctcc i mm10.chr11 I 758 C 0 e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 64322 5446 + 75148670 I e rheMac3.chr16 68626 74 + 80904711 I a score=45130.000000 s hg38.chr17_GL383563v3_alt 146940 46 + 375691 ccccacccatccttcccccacccattccccactcaactatcgccct s panTro4.chr17 141617 46 + 82630442 ccccacccatccttcccccacccattccccactcaactatcgccct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38436 46 + 73212453 CCCCACCTATCCTTCCCCCACCCATTCCCCACTCAACTATCGCcct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 101022 46 - 81552678 ccccacccatccttcccccacccattccccactcaactatcgccct i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 79026 46 + 74645514 ccccacccatccttcccccacccactccccactcaaacatcgccct i papAnu2.chr16 C 0 C 0 s mm10.chr11 75816789 46 + 122082543 tcctcctcctcctcctcctcctcctcctcctcctcctcttcttctt i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I e calJac3.chrUn_GL286409 884944 313 - 1291538 I e chlSab2.chr16 64322 5446 + 75148670 I e rheMac3.chr16 68626 74 + 80904711 I e macFas5.chr16 69163 350 + 80997621 M a score=30560.000000 s hg38.chr17_GL383563v3_alt 146986 28 + 375691 acccatcccccactcctccacccactca s panTro4.chr17 141663 25 + 82630442 acccatcccccactcc---acccactca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38482 28 + 73212453 acccatcccccactcctccacccactca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 101068 28 - 81552678 acccatcccccactcctccacccactca i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 79072 28 + 74645514 acccatcccccactcctccacccactca i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 885257 27 - 1291538 ATCCATCCcccacccacccaccca-tca i calJac3.chrUn_GL286409 I 313 I 4 s mm10.chr11 75816835 28 + 122082543 cttcttcttcttcttcttcttcttcttc i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I e chlSab2.chr16 64322 5446 + 75148670 I e rheMac3.chr16 68626 74 + 80904711 I e macFas5.chr16 69163 350 + 80997621 M a score=79732.000000 s hg38.chr17_GL383563v3_alt 147014 52 + 375691 cccatccatctcctcacccatccctcactcatccagacctccatcca---tctcc---------- s panTro4.chr17 141688 52 + 82630442 cccatccatctcctcacccatccctcactcatccatccctccatcca---tctcc---------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38510 52 + 73212453 cccatccatctcctcacccatccctcactcatccatccctccatcca---tcccc---------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 101096 52 - 81552678 cccatccatctcctcacccatccctcactcatccatccctccatcca---tcccc---------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68700 52 + 80904711 Cccatccatccccccacccgtccctcactcatccatccctccatcca---tcccc---------- i rheMac3.chr16 I 74 C 0 s papAnu2.chr16 79100 52 + 74645514 cccatccatctcctcacccgtccctcactcatccatccccccatcca---tcccc---------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 885288 52 - 1291538 tccaaccatcccctccctcactcacccttcctccacccacccatcca---tcccc---------- i calJac3.chrUn_GL286409 I 4 C 0 s mm10.chr11 75816863 61 + 122082543 ----ttcttcttcttcttcttcttcttcttcttcGtttttcgagacagggtccctggctgtcctg i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I e chlSab2.chr16 64322 5446 + 75148670 I e macFas5.chr16 69163 350 + 80997621 M a score=123458.000000 s hg38.chr17_GL383563v3_alt 147066 54 + 375691 ----tcactcacctgccatccacccatcccccaacca------tcctcacccctccaccaccca s panTro4.chr17 141740 54 + 82630442 ----tcactcacctgccatccacccatcccccaacca------tcctcacccctccaccaccca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38562 54 + 73212453 ----tcactcacctgccatccacccatcccccaacct------tcctcacccctccaccaccca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 101148 54 - 81552678 ----tcactcacctgccatccacccatcccccaacct------tcctcacccctccaccaccca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68752 54 + 80904711 ----tcactcatctgccatccacccatccCcccacct------tcctcacccctccaccaccca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 69513 54 + 80997621 ----TCACTcatctgccatccacccatccccccacct------tcctcacccctccaccaccca i macFas5.chr16 M 350 C 0 s papAnu2.chr16 79152 54 + 74645514 ----tcactcatctgccatccacccatccccccacct------tcctcacctctccaccaccca i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 885340 54 - 1291538 ----tcacccaTCTGCCATCTCCCCATCCCCTAGTCG------TCCGCACCCCTCCAGCCCCTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75816924 61 + 122082543 gaactcact---ctgtagaccaggctggcctcgaactcagaaatccacctgcttctgcctccca i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I e chlSab2.chr16 64322 5446 + 75148670 I a score=79239.000000 s hg38.chr17_GL383563v3_alt 147120 33 + 375691 ----ctgacccatcccctacccctccatcTACCCatg s panTro4.chr17 141794 33 + 82630442 ----ctgacccatcccctacctctccatctacccacg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38616 33 + 73212453 ----ctgacccatcccctacccctccatctacccaTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 101202 33 - 81552678 ----ctgacccatcctctacccctccatctacccatg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68806 33 + 80904711 ----ctgacccaccccctacccctccatctgcccaTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 69567 33 + 80997621 ----ctgacccaccccctacccctccatctgcccatg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 79206 32 + 74645514 ----ctgacccaccccct-cccctccaTCTGCCCATG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 69768 32 + 75148670 ----CTGACCCACCCCCA-CCCCTCCATCTGCCCatg i chlSab2.chr16 I 5446 C 0 s calJac3.chrUn_GL286409 885394 31 - 1291538 ----CTCACCCCTCCCTA--CCCTCCATCTGCCCatg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75816985 33 + 122082543 agtgctgg----gattaaaggtgtgcaccaGTCCAGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15642554 874 - 61074082 I a score=2402961.000000 s hg38.chr17_GL383563v3_alt 147153 793 + 375691 catccatgcatccattgatccagcaatatttcttgacagctaactagggacccaaaggtgaataagccttgacttctgccttcaggagcC------------GGGCTCTAGGGAACCCAGCCTTGCCATGCCACG-TCTGGAAGCAGAGCCTGGGAAGAAGGTGCAGCG-ACTGATCTGGGCAGGCCCCTGCTGT---GGGGGCAG----GGATGACAGGGCCCAGCTTTTGGTTCCCTTTTCCCCATGAAAGAGCCTGGGCAAAGGTGGAGGCGATGGCAGTCgggaaggagggagcagg-gagggagAAGCTTCATTTGTCAGCTGCTCAGCAGGTACAGTCAGACTTAAAATGTCTCCAAAGAGCAGCCGCTGAGAGGCAGGGGGTGAGCACGCTGAATTATTT-TCT-GGTAATTGGCACTGAAGAAGCTGCAGACATCCTGAGGTCTGCATCAAA-GGCTCAGAGCTTCGG-CCGTCTTGGTGGAGACT-G-GGGGCACCTCGTCGGGG-GCTCCTAAGGATCTCTGAGctcctgcctcctcctcctcctgcctgcctgctctcctc-------GGTACTGT------------------------------------GGGGTGAGGAGAGGC--------------------------------------------------------ACACTC------------TGCTTTGCTTTCTGCACAAG--ACAGCCCC-GGGGTGGGGCCGGGCGC-TGCGGGTCAGAGCCCTGACCGTTTGCA----------------------GAG----------------GAAAGGAAAGGGACAGGAA-----ACTG-------------GAGCATCAAGGCCCTGCTTTGCAGGGGACACCAGGACTTAGCCATGGCAGGGGCTCTGCCAATGC---TCTTCACACATGGCCTGGCGAGGTCCTTCTCCTCACATACTCCGGGCAATGCCAGTGC s panTro4.chr17 141827 793 + 82630442 catccGTGCatccattgatccagcaatatttcttgacagctaactagggacccaaaggtgaataagccttgacttctgccttcaggagcC------------GGGTTCTAGGGAACCCAGCCTTGCCATGCCACG-TCTGGAAGCAGAGCCTGGGAAGAAGGTGCAGTG-ACCGATCTGGGCAGGCCCCTGCTGT---GGGGGCAG----GGATGACATGGCCCAGCTTTTGGTTCCCTTTTCCCCATGAAAGAGCCTGGGCAAAGGTGGAGGCGATGGCAGTCGGGAAGGAGGGAGCGGG-GAGGGAGAAGCTTCATTTGTCAGCTGCTCAGCAGGTACAGTCAAACTTAAAATGTCTCCAAAGAGCAGCCGCTGAGAGGCAGGGGGTGAGCACGCTGAATTATTT-TCT-GGTAATTAGCGCTGAAGAAGCTGCAGACATCCTGGGGTCTGCATCAAA-GGCTCAGCGCTTCGG-CCGTCTTGGTGGAGACT-G-GGGGCACCTTGTCGGGG-GCTCCTAAGGATCTCTGAGCTCCTGCCTCCTCCTCCTCCTGCCTGCCTGCTCTCCTC-------GGTACTGT------------------------------------GGGGTGAGGAGAGGC--------------------------------------------------------ACACTC------------TGCTTTGCTTTCTGCACAAG--ACAGCCCC-GGGGTGGGGCCGGGCGC-TGCGGGTCAGAGCCCTGACCGTTTGCA----------------------GAG----------------GAAAGGAAAGGGACAGGAA-----ACTG-------------GAGCATCAAGGCCCCGCTCTGCGGGGGACACCAGGACTTAGCCATGGCAGGGGCTCTGTCAATGC---TCTTCACACATGGCCTGGCGAGGTCCTTCTCCTCACATACTCCGGGCAATGCCAGTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 38649 795 + 73212453 CATCCATGCGTCCATCGATCCAGCAATATTTCTTGACAGCTAACTAGGGACCTAAAGGTGAATAAGCCTTGACTTCGGCCTTCAGGAGCC------------GGGCTCTAGGGAACCCAGCCTTGCCATGCCACG-TCTGGAAGCAGAGCCTGGGAAGAAGGTGCAGCG-ACTGATCTGGGCAGGCCCCTGCTGT---GGGGGCAG----GGATGACACGGCCCAGCTTTTGGTTCCCTTTTCCCCATGAAAGAGCCTGGGCAAAGGTGGAGGTGATGGCAGTCAGGAAGGAGGGAGCGGG-GAGGGAGAAGCTTCACTTGTCAGCTGCTCAGCAGGTACAGACAGACTTAAAACGTCTCCAAAGAGCAGCCGCTGAGAGGCAGGGGGTAAGCACGCTGAATTATTT-TCT-GGTAATTGGCACTGAAGAAGCTGCAGACATCCTGGGGTCTGCATCAAA-GGCTCAGAGCTTTGGCCCGTCTTGGTGGAGACT-G-GGGGCACCTTGTCGGGG-GCTCCTAAGGCTCTCTGAGCTCCCGCCTCCTCCTCCTCCTGCCTGCCTGCTCTCCTC-------GGTACTGT------------------------------------GGGGTGAGGAGAGGC--------------------------------------------------------ACACTC------------TGCTTTGCTTTCTGCACAAG--ACAGCCCCGGGGGTGGGGCCAGGCGC-TGCAGGTCAGAGCCCTGACCATTTGCA----------------------GAG----------------GAAAGGAAACAGACAGGAA-----ACTG-------------GAGCGTCAAGGCCCTGCTCTACAGGGGATGCCAGGACTTAGCCATGGCAGGGGCTCTGCCAATGC---TCTTCACACATGGCCTGTCAAGGTCCTTCTCCTCACATACTCCGGGCAATGCCAGTGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 101235 747 - 81552678 c--ccatgcatccattgatccaGCAGTATTTCTTGACAGCTAACTAGGGACCCAAAGGTGAAAAAGCCTTGACTTCTGCCTTCAGGAGCC------------GGGCTCTAGGGAACCCAGCCTTGCCACGCCACG-GCTGGAAGCAGGGCCTGGGAAGAAGGTGCAGCG-ACTGATCTGGGCAGGCCCCTGCTGT---GGGGGCAG----GGATGACACGGCCCAGCTTTTGGTTCCCTTTTCCCCATGAGAGAGCCTGGGCAAAGGTGGAGGCAATAGCAGTCAGGAAGGAGGGAGCGGG-GAGGGAGAAGCTTCACTTGTCAGCTGCTCAGCAGGTACAGTCAGACTTACAATGTCTCCAAAGAGCAGCCTCTGAGAGGCAGGGGATGAGCACGCTGAATTATTT-TCT-GGTAATTGGCACTGAAGAAGCTGCAGACATCCTGGGGTCTGCATCAAA-GGCTCAGAGCTTTGGCCCGTCTTGGTGGAGACT-G-GGGGAACCTTGTCGGGG-GCTCCTAAGGCTCTCTGAGctcctgcctcctcct-------cctgcctgctctcctc-------GGTACTGT------------------------------------GGGGTGAGGAGAGGC--------------------------------------------------------ACACTC------------TGCTTTGCTTTCTGCACAAG--ACAGCCCC-GGGGTGGGGCTGGGCGC-TGCGGGTCAGAGCCCTGACCGTTTGCA----------------------GAG----------------GAAAGGAAAGGGGCAGGAA-----ACTG-------------GAGCCTCAAGGCCCTGCTCTGCAGGGG-----------------------------------------TCTTCACACATGGCCTGGCGAGGTCCTTCTCCTCACGCACTCCGGGCAATGCCAGTGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 68839 748 + 80904711 CGTCTGTGCGTCCATTGATCCAGCAATATTTCTCGACAGCTAACCAGGGACCCAAAGGTGAATAAGCCTTGACTTCTG-CTTCGGAAGCC-------------GGCTCTAGGG-ACCCCGCCTTGCCCCACCAC--TCTGGAAGCAGAGCC-CGGAAGGAGGTGCAGCG-ACTGATCTGGGCGGGTCCCTGCTTT---GGGGCCAG----GGATGACACGGCCCAGCTTTTGGTTCCCTTTTCCCCCTGAAAGAGCCTGGGCA------GAGGCGATGGCAGACGGGAAGGAGGGAG-------------------------------------GGGTACAGTCAGACTTAAAATGTCTCCAAAGAGGAGCCGCTGAGAGGCA-GGGCTGAGCACGCTGAATTATTT-TCT-GGTAATTGGGACTGAAGAAGCTGCAGACATCCTGGGGTCTGCATCAAA-GGCTCAGAGCTTCGGCCCGTCTTGGTGGAGACC-G-GGGGCACCTTGTCGGGG-GCTCCCAAGGCTCTCTGAGCTCCCACCCCCTCCTCCTCCCGCCTGTCTGCTCTCCGC-------GGTAC-GC------------------------------------GGGGTTGCGAGAGGC--------------------------------------------------------AGGCTC------------TGCTGTGCTTTCTGCACAAGACACAGCCCCAGGGGTGGCGCCGGGCGC-TGCAGGTCAGAGCCCTGACCGTTTGCA----------------------GAG----------------GAAAGGAGAGGGACAGGCA-----ACTG-------------GAGCATCAAGGCCCTGCTCTGCAGGGGACGCCGGGACTCAGCCGTGGCAGGGGCTCTGCCAGTGC---TCTTCACACATGGCCTGGCGAGGCCCTTCTCCTCACATGCTCCGGGCATTGCTAGTGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 69600 748 + 80997621 cgtccgtgcgtccattgatccaGCAATATTTCTCGACAGCTAACCAGGGACCCAAAGGTGAATAAGCCTTGACTTCTG-CTTCGGAAGCC-------------GGCTCTAGGG-ACCCCGCCTTGCCCCACCAC--TCTGGAAGCAGAGCC-GGGAAGGAGGTGCAGCG-ACTGATCTGGGCGGGTCCCTGCTTT---GGGGCCAG----GGATGACACGGCCCAGCTTTTGGTACCCTTTTCCCCCTGAAAGAGCCTGGGCA------GAGGCGATGGCAGACGGGAAGGAGGGAG-------------------------------------GGGTACAGTCAGACTTAAAATGTCTCCAAAGAGGAGCCGCTGAGAGGCA-GGGCTGAGCACGCTGAATTATTT-TCT-GGTAATTGGCACTGAAGAAGCTGCAGACATCCTGGGGTGTGCATCAAA-GGCTCAGAGCTTCGGCCCGTCTTGGTGGAGACC-G-GGGGCACCTTGTCGGGG-GCTCCCAAGGCTCTCTGAGCTCCCACCCTCTCCTCCCCCCGCCTGTCTGCTCTCCGA-------GGTAC-GC------------------------------------GGGGTTGGGAGAGGC--------------------------------------------------------AGGCTC------------TGCTGTGCTTTCTGCACAAGACACAGCCCCAGGGGTGGCGCCGGGCAC-TGCAGGTCAGAGCCCTGACCGTTTGCA----------------------GAG----------------GAAAGGAGAGGGACAGGCA-----ACTG-------------GAGCATCAAGGCCCTGCTCTGCAGGGGACGCCAGGACTCAGCCGTGGCAGGGGCTCTGCCAGTGC---TCTTCACACATGGCCTGGCGAGGCCCTTCTCCTCACACGCTCCGGGCAATGCTAGTGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 79238 757 + 74645514 CGTCCGTGCGTCCATTGATCCAGCAATATTTCTCGACAGCTAACCAGGGACCCAAAGGTGAATAAGCCTTGACTTCTGCCTTCAGGAGCC-------------GGCTCTAGGG-ACCCCGCCTTGCCCCACCAC--TCTGGAAGCAGAGCT-GGGAAGGAGGTGCAGCG-ACTGATCTGGGCGGGTCCCTGCTTT---GGGGGCAG----GGATGACACGGCCCAGCTTTTGGTTCCCTTTTCCCCATGAAAGAGCCTGGGCAGAGGTGGAGGCGATGGCAGacgggaaggagggag-------------------------------------gggtaCAGTCAGACTTAAAATGTCCCCAAAGAGCAGCCGCTGAGAGGCAGGGGGTGAGCACGCTGAATTATTT-TCT-GGTAATTGGCACTGAAGAAGCTGCAGACATCCTGGGGTCTGCATCAAA-GGCTCAGAGCTTCGGCCCGTCTTGGTGGAGACC-G-GGGGCACCTTGTCGGAG-GCTCCCAAGGCTCTCTGAGCTcccaccccctcctcctctcGCCTGTCTGCTCTCCAC-------GGTACTGT------------------------------------GGGGTTGGGAGAGGC--------------------------------------------------------AGGCTC------------TGCTGTGCTTTCTGCACAAGACACAGCCCCAGGGGTGGCGCCAGGCGC-TGCAGGTCAGAGCCCTGACCGTttgca----------------------gag----------------gaaaggaaagggacaGGAA-----ACTG-------------GAGCATCAAGGCCCTGCTCTGCAGGGGACGCCAGGACTCAGCCGTGGCAGGGGCCCTGCCAATGC---TCTTCACACATGGCCTGGCGAGGCCCTTCTCCTCACATGCTCCGGGCAATGCTAGTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 69800 757 + 75148670 catccatgcgtccattgatccagcagtatttctcgacagctaaccagggacccaaaggtgaataagccttgacttctgccttcaggagcC-------------GGCTGTAGGG-ACCCCGCCTTGCCACACCAC--TCTGGAAGCAGAGCCTGGGAAGGAGGTGCAGCG-ACTGATCTGGGCGGGTCCCTGCTTT---GGGGGCAG----GGATGACACGGCCCAGCTTTTGGCTCCCTTTTCCCCATGAAAGAGCCTGGGCAGAGGTGGAGGCGATGGCAGACGGGAAGGAGGGAG-------------------------------------GGGTACAGTCAGACTTAAAATGTCTCCAAAGAGGAGCCGCTGAGAGGCAGGGGCTGAGCACGCTGCATTATTT-TCT-GGTAATTGGCACTGAAGCAGCTGCAGACAACCTGGGGTCTGCATCAAA-GGCTCAGAGCTTCGGCCCGTCTTGGTGGAGACC-G-GGGGCACCTTGTTGGGG-GCTCCCAAGGCTCTCTGAGCTCCCACCTCCTCCTCCTCCCGCCTGTCTGCTCTCCGC-------GGTACTGT------------------------------------GGGGTTGGGAGAGGC--------------------------------------------------------AGGCTC------------TGCTCTGCTTTCTGCACAAGACACAGCCCCAGGGGTGGCG-CGGGCGC-TGCAGGTCAGAGCCCTGACTGTTTGCA----------------------GAG----------------GAAAGGAAAGGGACAGGAA-----ACTG-------------GAGCGTCAAGGCCCTGCTCTGCAGGGGACGCCGGGACTCAGCCGCGGCAGGGGCTCTGTCAATGC---TCTTCACACATGGCCTGGCGAGGCCCTTCTCCTCACATGCTCCGGGCAATGCTAGTGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 885425 785 - 1291538 catccatgcatccattgatccagcaacacttcttgacagctaaccggggactcaaagataaacaagccttgacttctgccttcaggagct------------GGGCTCTGGGGAACCCAGCATTGCCACGCCACG-TCTGGAAGCACAGACTGGGAAGGAGGTGTGGGG-ACTGATCTGAGCAGGCCCCTACTTTG--GGGGGCAG----GGATGACACAGCCCAGTTTTGGGTTCCCTTCTCCCCATTAAAGAGCCTGGGCCAAGGTGGAGGCGGAGGCAGTCAGGAAGGAGGGAG-GAG-GAGGGAGAAGCTTCACTTGTCAGCTGCTCAGCAGGTACAGTCAGACTTAAAATGCCCCCAAAGAACAGCCGCTGAGAGGCAGGGGGTGAGCATGCTGAATTATCT-TCT-GGTAACTGGCATTGAAGATGCTGCAGACATCCTGGGGTCTGCATCAAAGGGCTGAGAGCTTCGC-CCATCTTGCTGGAGATG-GAGGGGCACCTTGTCGGGG-GCTCCCGAGGCTCTCTGAGCTCCCACCTCCTCCTCCTCCCGCCCGTCTGCTT------------GGTACTGT------------------------------------TGGG-GGTGGGGGAC--------------------------------------------------------ATGCTC------------TGCTTTGCTTTCTACACAAG--ACAGCCCT--TGGTGGG--TGGGCAC-TGCAGGTCAGAGCCCTGACCGTTTGCA----------------------GGG----------------GAAAGGAAAGGGACAGGAG-----ACTG-------------GAGCATCAAGGTCCTGCTCTGT-GAGGACACCAGGATGAAGCCACAGCAGGGGCTCTGCCCATGT---TCTTCACACACAGCCTGGCAAGGGCCTTCTCCTCACACACTCCGGCCAATGCCGGTGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75817018 893 + 122082543 TGCTGGACCACCGCCCAGTCCATCCCTACTTCTTGATTGCTAACCAGGGGCT----------TAAGACCTGGCTTTGCCTTTAAGGAGGAAGTGAAAGATATGGCCCCTAAGGAGCACAGGTCTGTTCCAGCACATTATAGAAGTACAGCCCAGGCAGGAGATTTAAGG-GACAAAC----CAACTCCTTCCACT--------------------------TTCAGCCCTTCCCACCCCTAGCCTTAAAAAGCAAACAGAGGAAGGATTGAGTAGCTGG-AGAGGAGAAGGGGAGAG--------AGGGAGTTCTCATTTGTCAGCTGCTCAGCAGGTACAGTCAGGCTTAAAATGTCCCCAGAGAGTGTCTGCTGAGATGCAGGGGGTGAGCACGCTGAATTATTT-CCCAGGTAATTGGCAGCAAAGAAGCTGCCGACATCCTGGGGTCTGCATCAAAGGGGTCAGAGTTTCA--CCTGCTTCCTGTAGGCT-G-GCGGCTCCGTGTGGGTGTGGCCCCAAGGCTCCTGGAACTCCCACCTACCACTC--TCTGCCATTCTCCTCCCCTCTCCTTAAGGTACtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagacagagacagagacagagacagagacagagacagagacagagacagagacagagacagagacTCAGAAAGAGAGTATGCTTTGCTACCTGCAAAAG--ACAGCCCA-GGGCTGGGGCT--GCTA-TGCAGTCTGGGGCCCTGACCATTGGCA----------------------GAGCCTTGTACCAGCTTCAGAGGAGGGAAGAAGAGGAA-----ACTG-------------GAGCTTCTAGGTCTTTTTCTGCAGCAGTGTTTAGGATCCAGTAgtgtgtgtgtgtatgtgtgtgtgtgtgtCTGCCAGTGGACCTGATGGGTCTTTCTCCCTGTGTGGTCTGGGCTGTCTCTGTAC i mm10.chr11 C 0 I 5348 s canFam3.chr9 15643428 779 - 61074082 cacccaggGATCCTCTAATCCAGCAATATCTCTTGCCAGCTAA-------ACcaaagatgaataaggccaggcctctgccttta--agTCGGTGGGATGTCTGGATGCCAGGGAACCCAGCCCTGCACGCACACAGTGTGCAAGCAGAGTCCAGGCAGTGAGTCCCGGGCACTGATCTGAGCAGGCCTGTGTGCTGATGGGGGGAGGGCAGGAAGACAACCCCCAGCCTTCTGTTCCTCTGCCCTCCTGAACCATGATGAGCT------GGAGAGCTTGCAGTCAGGAAGGAGGGAGTGAGCAAGGGAGAGGCTTCACTTGTCAGCTGCTCTGCAGGTACAGTCAGAATTAAAATGTCCCCAAAGAGTGTCTGCTGAGAGGCAGGGGGTGAGCACGCTGAATTATTTCTCC-AGTAATTGGCCCCGAACAAGCCGCAGACATCCTGGGGTC----------TGCCCAGAGCTC--GCCTGTCTGGGTGAAGATTAG-GGGGCAGCTTGTCTGGG-TCTCCTGGGGCTCTGGCAGC-CCCACCGTCCTGTCCTTTCCCCT-----CCCCCTTC-------CGACTGAT------------------------------------GGGGTGA------GC--------------------------------------------------------GAGCTC------------TCCTTGGCTTTCTGCGCAGG---CAGCCG--GGGGTGGGGCTGGGTGCGGGCAGGTCAGAACCCTGGCTGTCTGCAGTGGGGCCTCGAGCCTGCTGCGGAG----------------GAAGGGCCAGGGATGAGCACACACATCGAGCATCATCCACCGAGCATCCAGGCCCTTCTCTGCAGGGAAC----------AGCCTTGCCAGAGGCTCTGTC--------TCT---------GCCCGGTA----------------GCGGTGTGGGCAAGGCCAGTGC i canFam3.chr9 I 874 C 0 a score=371634.000000 s hg38.chr17_GL383563v3_alt 147946 120 + 375691 CAGGTTTTCCTTTGGTCTCATCCCTCCCCTGTGCAGAAGAGCATTTGCTGGCAC-TTGGATGAGCAATTTAAAGGCACTGGTCCTCCACATATAtttgagacagggtcttgctctgtcaat s panTro4.chr17 142620 120 + 82630442 CAGGTTTTCCTTTGGTCTCATCCCTCCCCTGTGCAGAAGAGCATTTGCTGGCAC-TTGGATGAGCAATTTAAAGTCACTGGTCCTCCACATATAtttgagacagggtcttgctctgtcaat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 39444 120 + 73212453 CAGGTTTTCCTTTGGTCTCATCCCTCCCCTGTGCAGAAGAGCATTTGCTGGCAC-TTGGATGAGCAATTTAAACTCACTGGTCCTCCACATATAttcgagacagggtcttgctctgtcaat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 101982 120 - 81552678 CAGGTTTTCCTTTGGTCTCATCCCTCCCCTGTGCAGAAGAGCATTTGCTGGCAC-TTGGATGAGCAATTTAAACTCACGGGTCCTCCACATATAtttgaaacagggtcttgctctgtcaat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 69587 120 + 80904711 CAGGTTTTCCTTTGGTCTCATCCCTCACCCCTGCAGAAGAGCATTTGCTGGCAC-TTGGATGAGCAATTTAAACTCACAGGCCCTCCGCATATAtttgagacagggtgttgctctgtcagt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 70348 120 + 80997621 CAGGTTTTCCTTCGGTCTCATCCCTCCCCCGTGCAGAAGAGCATTTGCTGGCAC-TTGGATGAGCAATTTAAACTCACAGGCCCTCCGCATATAtttgagacagggtgttgcgctgtcagt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 79995 120 + 74645514 CAGGTTTTCCTTTGGTCTCATCCCTCCCCTGTGCAGAAGAGCATTTGCTGGCAC-TTGGATGAGCAATTTAAACTCACAGGCCCTCCgcatatatttgagacagggtgttgctctgtcagt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 70557 119 + 75148670 CAGGTTTTCCTTTGGTCTCATCCCTCCCCTGTGCAGAAGAGCATTTGCTGGCAC--TAGATGAGCCATTTAAACTCACAGGCCCTCCGCATATAtttgagacagggtgttgctctgtcagt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 886210 109 - 1291538 CAGGTTTTCC------CTCATCCTTCCCCTGTGCAAAAGAGCATTGGA-AGCAC-CTGGATGAGCAATTCAGACT----AGACCTCCACAtttatttgaggcagggtcttgctctgtcact i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15644207 95 - 61074082 TGGGTTTTCCTTTGGTCCCATCCTTCG---GTGCAGAAGAGCCTGTGCTGGCATTTTGGATGAGCAATCTGAACCGACCGGTC---------------AGACAG--------TTTGTCAGT i canFam3.chr9 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I a score=754085.000000 s hg38.chr17_GL383563v3_alt 148066 284 + 375691 caggctggagtgcagtggcacagtcacagctcagtgcagcctcaaactcttgggctcaagtgatcctcccttctcagcctcctgtgtagctggtactacaggcatgcaccaccacgtctggct-atttttttttttttttaatttttgtggagatggcatctctccatattgcccaggctggtctcgaactcctgggctcaggtgatactcctgccttggcctcccaaagtcctgggattacaggcatgagccattgcacctggccTCCTACGTATTCTGTAAAC s panTro4.chr17 142740 283 + 82630442 caggctggagtgcagtggtacaatcacagctcactgcagcctcaaactcttgggctcaagtgatcctctcttctcagcctcctgtgtagctggtactacaggcatgaaccaccacgtctggct--tttttttttttttttaatttttgtggagatggcatctctccatattgtccaggctggtctcgaactcctgggctcaggtgatactcctgccttggcctcccaaagtcctgggattacaggcatgagccattgcacctggccTCCTACGTATTCTGTAAAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 39564 250 + 73212453 caggctggagtgcag-----------------------------------tgggctcaagtgatcctcccttctcagcctcctgtgtagctggtactacaggcatgcaccaccacgtctggcttttttttttttttttttaatttttgtggagatggcatctctccatattgcccaggctggtctcgaactcctgggctcaggtgatactcctgccttggcctcccaaagtcccgggattacaggcatgagccaccgcacctggccTCCTACGTATTTTGTAAAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102102 283 - 81552678 caggctggagtgcagtggcacaatcacagctcattgcagcctcaaactcttgggctcaagtgatcctcccttctcagcctcctctgtagctggtactacaggcatgcaccaccacgtctggct--ttttttttttttttttttttttgtggagagggcatctctccatattgcccaggctggtctcgaactcctgggctcaggtgatattcctgccttggcctcccaaagtcctgggactacaggcatgagccattgcacctggccTCCTACGTATTCTGTAAAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 69707 274 + 80904711 caggctgaaatgcaggtgcacagtcacagctcactgcagcctccaactcttgggctcaa-tgatcctcccttctcagcctcctgtgtagctggtgctacaggcgtgcaccaccacatctggct----------acatttttatttttctggagatgcaatctccccatattgcccaggctggtctcgaactcctgggctcaggtgattctcctgccttggccttccaaagtgctgggattacaggcaagagccattgcacctggccTCCTCCGTATTCTGTAAAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 70468 274 + 80997621 caggctgaaatgcaggtgcacagtcacagctcactgcagcctccaactcttgggctcaa-tgatcctcccttctcagcctcctgtgtagctggtgctacaggcgtgcaccaccacgtctggct----------acatttttatttttctggagatggcatctccccatattgcccaggctggtctcgaactcctgggctcaggtgattctcctgccttggcctcccaaagtgctgggattacaggcaagagccattgcacctggccTCCTCCGTATTCTGCAAAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 80115 274 + 74645514 caggctgaaatgcaggtgcacagtcacagctcactgcagcctccaactcttgggctcaa-tgatcctcccttctcagcctcctgtgtagctggtactacaggcatgcaccaccacgtctggct----------atatttttatttttctggagatggCATCtccccatattgcccaggctggtctcgaactcctgggctcaggtgatcctcctgccttggcctcccaaagtgctgggattacaggcaagagccattgcacctggcctcctcCGTATTCTGTGAAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 70676 274 + 75148670 caggctgaagtgcaggtgcacagtcacagctcactgcagcctccaattcttaggctcaagtgatcctcccttctcagcctcctgtgtagctggtactacaggcaagcaccaccacgtctggct----------ata-ttttatttttctggagatggcatctccccatattgcccaggctggtctcgaactcctgggctcaggtgatactcctaccttggcctcccaaagtgctgggattacaggcaagagccattgcacctggccGCCTCCGTATTCTGTAAAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 886319 275 - 1291538 caggctgtagtgcagtggcacaaacacagttcaccgcagcctcaaactcttgggctcaagggcacctcccttcccagcctcctgtgtagctggtactacaggcacacatcaccatgcctgggt----------acttaaaaaattttgtggagatggcatctgtccatattgcccaggctggtctccaactcctgggctaaggtaatcctcccctcttggcctcccaaagtgctgggattacaggtgtgagctgctgcacctggccTCCTCCGTATTCTGTAAAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644302 0 - 61074082 C a score=469233.000000 s hg38.chr17_GL383563v3_alt 148350 155 + 375691 AGGTGAACCT-TTCTGTGTTTGTACATACTAGTGTATGCACACGTGTGTGTGCGTCTGTGTG------------CCGTCCATCTCCCCTGGCGAGGGCCCCTTCTGCCTAGTACC-----------TCCAACAGCTGGACCCTCCAGCTGGTCACCTTATGTAGGAGGCTTCTCTCCCC s panTro4.chr17 143023 155 + 82630442 AGGTGAACCT-TTCTGTGTTTGTACATACTAGTGTATGCACACGTGTGTGTGCGTCTGTGTG------------CCGTCCATCTCCCCTGGCGAGGGACCCTTCTGCCTAGTACC-----------TCCAACAGCTGGACCCTCCAGCTGCTCACCTTATGTAGGAGGCTTCTCTCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 39814 155 + 73212453 AGGTGAACCT-TTCTGTGTTTGTACATATTAGTGCATGCACACGTGTGTGTGCGTCTGTGTG------------CCGTCCATCTCCCCTGGCGAGGGCCCCTTCTGCCTACTACC-----------TCCAACAGCTGGACCCTCCAGCTGGTCACCTTATGTAGGAGGCTTCTCTCCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102385 155 - 81552678 AGGTGAACCT-TTCTGTGTTTGTACATACTAGTGTATGCACACGTGTGTGTGCGTCTGTGTG------------CCGTCCATCTCCCCTGGCGAGGGCCCCTTCTGCCTACTACC-----------TCCAACAGCTGGACCCTCCAGCTGGTCACCTTATGTAGGAGGCTTCTCTCCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 69981 167 + 80904711 AGGTGAAGCT-TTCTGTGTCTGTACATACTAGTGGATGCACACGTGTGTGTGCGTCTGTGGGCAGTCCATCTCCCCGTCCATCTCCCCTGGCGAGGGCCGCTTCTGCCCAGGACC-----------TCCAACAGCTGGGCCCTCCAGCCAGTTACCCAACATAGGAGGCTTCTCTCCCC i rheMac3.chr16 C 0 I 1 s macFas5.chr16 70742 167 + 80997621 AGGTGAAGCT-TTCTGTGTCTGTGCATACTAGTGGATGCACACGTGTGTGTGCGTCTGTGGGCAGTCCATCTCCCCGTCCATCTCCCCTGGCGAGGGCCGCTTCTGCCCAGGACC-----------TCCAACAGCTGGGCCCTCCAGCCGGTTACCCAACATAGGAGGCTTCTCTCCCC i macFas5.chr16 C 0 I 1 s papAnu2.chr16 80389 155 + 74645514 AGGTGAAGCT-TTCTGTGTCTGTACATACTAGTgtatgcacacgtgtgtgtgcgtcAGTGGG------------CCGTCCATCTCCCCTGGCGAGGGCCGCTTCTGCCCAGGACC-----------TCCAACAGCTGGGCCCTCCAGCCGGTCACCCTGCATAGGAGGCTTCTCTCCCC i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 70950 154 + 75148670 AGGTGAAGCT-TTCTGTGTCTGTACATACTAGTGTATGCACACGTGTGTGTGCGTCTGTGGG------------CCATCCATCTCCCCTGGCGAGGGCCACTTCTGCCCAGGACC-----------TCCAACAACT-GGCCCTCCAGCTGGTCACCCTACGTAGGAGGCTTCTCGCCCC i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 886594 147 - 1291538 AGTAGAACATATTCTGTGTCTGTAGGTACTAGTGTGTGCACACTTGTGTGTGGGTCTGTGTG------------GCATCCATCTCCCCTGGC-AAGGCCCCTTCTGCCTAGTACC-----------TCCCACAGCTGGGCCCTCCCGCTACTCACCTTGTGCGGGAGGCTT-------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15644302 157 - 61074082 GGTTAAATCT-TTCTGTGTCTGTTTGCACTAGCGTGTGCATGTGTGTAGGTGCTC------G------------GTGTCTGTCTCCCTAGGCAAGGG---TTTCTGGCTGGCCCCTGGGGCACCTGTCCCACAGCTGGGCCCTCCAGCTGGTAGCCTCATGCTGGAGGCTTCTCCTCCC i canFam3.chr9 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I a score=78396.000000 s hg38.chr17_GL383563v3_alt 148505 102 + 375691 ----CATGGGCGGAGTGCAGGGCAGGGTGGCCTGGGGTGGAGGCTGCAGGCAGGCCAGTTCCCCATCCAGCCTCAGCCTCCTTCCTGCTGGGGAACCAATCAtagg s panTro4.chr17 143178 102 + 82630442 ----CATGGGCGGAGTGCAGGGCAGGGTGGCCTGGGGTGGAGGCTGCAGGCAGGCCAGTTCCCCATCCAGCCTCAGCCTCCTTCCTGCTGGGGAACCAGTCAtagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 39969 102 + 73212453 ----CATGGGCGGAGTGCAGGGCAGGGCAGCCTGGGGTGGAGGCTGCAGGCAGGCCAGTTCCCCACCCAGCCTCAGCCTCCTTCCTGCTGGGGAACCAGTCAtagg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102540 101 - 81552678 ----CACGGGCGGAGTGCAGGGCAGGGCAGCCTGGGGTGGAGGCTGCAGGCAGGCCAGTTCCCCACCCAGCCTCAGCCTCCTTCCTGCGGGGGAACCAGTCATA-G i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 886741 57 - 1291538 ----------------------------------------------CAGGGAGG--AGTTCCCCACCCGGCCTCAGCCTCCTTCCTGCTGGGG-ACCAGTCAtagg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15644459 104 - 61074082 TCCTGAGAGGCAGACTACTTAGGTCGGCAGCTCGGGGTGGGGGTTCCAGACAGGCCAGTTCCTAGCC--ATCTCTGCCTCCTTCCTGCCGTGGAACCAAGGATTGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=116656.000000 s hg38.chr17_GL383563v3_alt 148607 183 + 375691 ggaggaaactgagctttttccttacagccacctcaggctcattggctgggccccctgttaaaaaaaaaatacaaaaaaggggggggcagattaaccagagaaaagtctgagcatgtatttagcatgtgttacgtcacacggaagctccatgaagaagtgaacacctgaagGCACCA--CAGAGCC s panTro4.chr17 143280 176 + 82630442 ggaggaaactgagctttttccttgcagccacctcaggctcattggctgggccccctgttaaaaaaa------aaagggggggggggcagattaaccagagaaaagtctgagcatgta-ttaacatgtgttacgtcacacggaagttccatgaagaagtgaacacctgaagGCACCA--CGGAGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40071 171 + 73212453 ggaggaaactgagctttttccttgtagccacctcaggctcattggctgggccccctgtaaaaaaaa------aaa--------gggcagattaacaacagaaaagtctgagcatgtatttagcatgtgttacgtcacacagaagcaccatgaagaagtgaacacctgaaggaacCACGCGGAGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102641 176 - 81552678 GGAGGAAACTGAGCTTTTTCCTTGTAGCCACCTCAGGCTCATTGGCTGGGCCCCCTGTaaaaaaaa------aaaaaaaaaa-aGGCAGATGAACCACACAAAAGTCTGAGTATGTATTTAGCATGTGTTACGTCACACAGAAGCGCCATGAAGAAGTGAACACCTGAAGGAACCA--GGGAGCC i nomLeu3.chr19 C 0 I 14 s calJac3.chrUn_GL286409 886798 159 - 1291538 ggaggaaactgagctttttccttgtagccaactcaggctcattggctgggccccctgtgaaaaaaa------aaaaaaa----agtcagattaataagag--aagtctgcacatgtatttaataagtgttacgtgacacaggagcttcatgaagaagtggagatctgaaga-------------- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=2944.000000 s hg38.chr17_GL383563v3_alt 148790 18 + 375691 CGAGTGTTTCTTACGGCA s panTro4.chr17 143456 14 + 82630442 CGAGTGTTTCTTAC---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40242 14 + 73212453 CGAGTGTTTCTTAC---- i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886957 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I e nomLeu3.chr19 102817 14 - 81552678 I a score=7324.000000 s hg38.chr17_GL383563v3_alt 148808 11 + 375691 GGCAGCTCGAT s panTro4.chr17 143470 11 + 82630442 GGCAGCTCGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40256 11 + 73212453 GGCAGCTCGAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102831 11 - 81552678 GGCAGCTCGAT i nomLeu3.chr19 I 14 C 0 s calJac3.chrUn_GL286409 886957 8 - 1291538 ---acctctat i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=5991.000000 s hg38.chr17_GL383563v3_alt 148819 11 + 375691 GGGGAAACGTG s panTro4.chr17 143481 11 + 82630442 GGGGAAACGTG i panTro4.chr17 C 0 I 290 s ponAbe2.chr17 40267 11 + 73212453 GGAGAAACGTG i ponAbe2.chr17 C 0 I 142 s nomLeu3.chr19 102842 11 - 81552678 GGGGAAACGTG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=4324.000000 s hg38.chr17_GL383563v3_alt 148830 17 + 375691 ATTGGGTGAGTGTTTCT s panTro4.chr17 143782 17 + 82630442 ATTGGGCGAGTGTTTCT i panTro4.chr17 I 290 C 0 s nomLeu3.chr19 102853 17 - 81552678 ATTGGATGAGTGTTTCT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I e ponAbe2.chr17 40278 142 + 73212453 I a score=5091.000000 s hg38.chr17_GL383563v3_alt 148847 11 + 375691 TACGGCAGCTG s panTro4.chr17 143799 11 + 82630442 TACAGCAGCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40420 11 + 73212453 TACGGCAGCTC i ponAbe2.chr17 I 142 C 0 s nomLeu3.chr19 102870 11 - 81552678 TACGGCAGCTG i nomLeu3.chr19 C 0 T 64 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=5222.000000 s hg38.chr17_GL383563v3_alt 148858 19 + 375691 GAGGAAGGTAGAAGGTGGC s panTro4.chr17 143810 19 + 82630442 GAGGAAGGTAGAAGGTGGT i panTro4.chr17 C 0 T 337 s ponAbe2.chr17 40431 19 + 73212453 GAGGAAGGTAGAAGGTGGC i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I e nomLeu3.chr19 102881 64 - 81552678 T a score=850.000000 s hg38.chr17_GL383563v3_alt 148877 11 + 375691 GGGGAAACGTT s ponAbe2.chr17 40450 11 + 73212453 GGGGAAACGTG i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I e nomLeu3.chr19 102881 64 - 81552678 T e panTro4.chr17 143829 337 + 82630442 T a score=1448.000000 s hg38.chr17_GL383563v3_alt 148888 6 + 375691 ATTGGA s panTro4.chr17 143492 6 + 82630442 ATTGGA i panTro4.chr17 T 337 C 0 s ponAbe2.chr17 40461 6 + 73212453 ATTGGG i ponAbe2.chr17 C 0 T 225 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I e nomLeu3.chr19 102881 64 - 81552678 T a score=60848.000000 s hg38.chr17_GL383563v3_alt 148894 126 + 375691 CGAATGTTTCCTACGGCAGCTCGATGGGGAAACGTGATTGGGCGAGTGTTTCTTATGGCACCTCGATGGGGAAACGTGATTGGGCGAGTGTTTCTCACGGCACCTCGATGGGGAAACATGATTGGG s panTro4.chr17 143498 126 + 82630442 CGAATGTTTCCTACGGCAGCTCGATGAGGAAACGTGATTGGACGAATGTTTCTTACGGCACCTTGATGGGGAAACATGATTGGGCGAGTGTTTCTTACGGCAGCTTGATGGGGAAACGTGATTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40242 125 + 73212453 CGAGTGTTTCTTACGGCAGCTCGATGGAGAAACGTG-TTGGGCGAGTCTTTCTTACGGCACCTCAATAGGGAAACATGATTGGGCAAGTGTTTCTTACGGCACTTCGATGGGGAAACGTGATTGGG i ponAbe2.chr17 T 225 T 125 s nomLeu3.chr19 102817 126 - 81552678 CGAGTGTTTCTTACGGCAGCTCGATGGGGAAACGTGATTGGATGAGTGTTTCTTACGGCAGCTGGATGAGGAAACGTGATTGGGCGAGTGTTTCTTACGGCACCTCGATGGGGAAACGTGATTGGG i nomLeu3.chr19 T 64 T 126 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=18096.000000 s hg38.chr17_GL383563v3_alt 149020 43 + 375691 CGAGTGTTTCTTACGGCAGCTCGATGGGGAAACGTGATTGGGT-- s panTro4.chr17 143624 41 + 82630442 CGAGTGTTTCTTACAGCACCTCGATGGGGAAACGTGATTGG---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40242 41 + 73212453 CGAGTGTTTCTTACGGCAGCTCGATGGAGAAACGTGTTGGG---- i ponAbe2.chr17 T 125 T 40 s nomLeu3.chr19 102817 43 - 81552678 CGAGTGTTTCTTACGGCAGCTCGATGGGGAAACGTGATTGG--AT i nomLeu3.chr19 T 126 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=18064.000000 s hg38.chr17_GL383563v3_alt 149063 39 + 375691 GAGTGTTTCTTATGGCAGCTCGATGGGGAAACGTGATTG s panTro4.chr17 143665 37 + 82630442 --GTGTTTCTTATGGCAGCTCGATGGGGAAACGTGATTG i panTro4.chr17 C 0 I 42 s ponAbe2.chr17 40243 38 + 73212453 GAGTGTTTCTTACGGCAGCTCGATGGAGAAACGTG-TTG i ponAbe2.chr17 T 40 C 0 s nomLeu3.chr19 102860 39 - 81552678 GAGTGTTTCTTACGGCAGCTGGATGAGGAAACGTGATTG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=32235.000000 s hg38.chr17_GL383563v3_alt 149102 62 + 375691 GGCGAGTGTTTCTTATGGCACCTCAATGGGGAAACGTGATTGGGCGAGTGTTTCTTACGGCA s panTro4.chr17 143744 62 + 82630442 GGCGAGTGTTTCTTATGGCACCTCGATGGGGAAACATGATTGGGCGAGTGTTTCTTACAGCA i panTro4.chr17 I 42 T 248 s ponAbe2.chr17 40281 62 + 73212453 GGCGAGTCTTTCTTACGGCACCTCAATAGGGAAACATGATTGGGCAAGTGTTTCTTACGGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102899 62 - 81552678 GGCGAGTGTTTCTTACGGCACCTCGATGGGGAAACGTGATTGGGCGAGTGTTTCTTACGGCA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=30342.000000 s hg38.chr17_GL383563v3_alt 149164 69 + 375691 CCTTGATGGGGAAACATGATTGGGCGAGTGTTTCTTACGGCAGCTCGA-----------------TGGGGAAACGTGATTGGGTGA s panTro4.chr17 143558 69 + 82630442 CCTTGATGGGGAAACATGATTGGGCGAGTGTTTCTTACGGCAGCTTGA-----------------TGGGGAAACGTGATTGGGCGA i panTro4.chr17 T 248 C 0 s ponAbe2.chr17 40343 69 + 73212453 CTTCGATGGGGAAACGTGATTGGGCGAGTCTTTCTTACGGCAGCTCAA-----------------TGGGGAAACATGATTGGACGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102961 86 - 81552678 GCTCGATGGGGAAACGTGATTGGACGAGTGTTTCTTACGGCAGCTGGAGGAAGGTAGAAGGTGGCGGGGGAAACGTGATTGGGCAA i nomLeu3.chr19 C 0 T 185 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=9171.000000 s hg38.chr17_GL383563v3_alt 149233 19 + 375691 GTGTTTCTTACGGCAGCTC s panTro4.chr17 143627 19 + 82630442 GTGTTTCTTACAGCACCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40412 19 + 73212453 GTGTTTCTTACGGCAGCTC i ponAbe2.chr17 C 0 T 126 s nomLeu3.chr19 102862 19 - 81552678 GTGTTTCTTACGGCAGCTG i nomLeu3.chr19 T 185 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=8809.000000 s hg38.chr17_GL383563v3_alt 149252 19 + 375691 CATGGGGAAACGTGATTGG s panTro4.chr17 143646 19 + 82630442 GATGGGGAAACGTGATTGG i panTro4.chr17 C 0 T 42 s ponAbe2.chr17 40305 19 + 73212453 AATAGGGAAACATGATTGG i ponAbe2.chr17 T 126 C 0 s nomLeu3.chr19 102881 19 - 81552678 GATGAGGAAACGTGATTGG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=600.000000 s hg38.chr17_GL383563v3_alt 149271 1 + 375691 G s panTro4.chr17 143623 1 + 82630442 G i panTro4.chr17 T 42 C 0 s ponAbe2.chr17 40324 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102900 1 - 81552678 G i nomLeu3.chr19 C 0 T 84 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=19288.000000 s hg38.chr17_GL383563v3_alt 149272 37 + 375691 CGAGTGTTTCTTACAGCACCTCGATGGGGAAACGTGA s panTro4.chr17 143624 37 + 82630442 CGAGTGTTTCTTACAGCACCTCGATGGGGAAACGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40325 37 + 73212453 CAAGTGTTTCTTACGGCACTTCGATGGGGAAACGTGA i ponAbe2.chr17 C 0 T 84 s nomLeu3.chr19 102817 37 - 81552678 CGAGTGTTTCTTACGGCAGCTCGATGGGGAAACGTGA i nomLeu3.chr19 T 84 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=3279.000000 s hg38.chr17_GL383563v3_alt 149309 7 + 375691 TTGGGTG s panTro4.chr17 143661 7 + 82630442 TTGGGTG i panTro4.chr17 C 0 T 84 s ponAbe2.chr17 40278 7 + 73212453 TTGGGCG i ponAbe2.chr17 T 84 C 0 s nomLeu3.chr19 102854 7 - 81552678 TTGGATG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=17000.000000 s hg38.chr17_GL383563v3_alt 149316 38 + 375691 AGTGTTTCTTACGGCAGCTCCATGGGGAAACGTGATTA s panTro4.chr17 143584 38 + 82630442 AGTGTTTCTTACGGCAGCTTGATGGGGAAACGTGATTG i panTro4.chr17 T 84 I 80 s ponAbe2.chr17 40285 38 + 73212453 AGTCTTTCTTACGGCACCTCAATAGGGAAACATGATTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102861 38 - 81552678 AGTGTTTCTTACGGCAGCTGGATGAGGAAACGTGATTG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=40768.000000 s hg38.chr17_GL383563v3_alt 149354 84 + 375691 GACGAATATTTCCTACGGAAGCTCGATGAGGAAACGTGATTGGGCGAGTGTTTCTTATGGCACCTCGATGGGGAAACATGATTG s panTro4.chr17 143702 84 + 82630442 GACGAATGTTTCCTACGGCAGCTCGATGGGGAAACGTGATTGGGCGAGTGTTTCTTATGGCACCTCGATGGGGAAACATGATTG i panTro4.chr17 I 80 C 0 s ponAbe2.chr17 40323 84 + 73212453 GGCAAGTGTTTCTTACGGCACTTCGATGGGGAAACGTGATTGGGCGAGTCTTTCTTACGGCAGCTCAATGGGGAAACATGATTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102899 84 - 81552678 GGCGAGTGTTTCTTACGGCACCTCGATGGGGAAACGTGATTGGGCGAGTGTTTCTTACGGCAGCTCGATGGGGAAACGTGATTG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e calJac3.chrUn_GL286409 886965 0 - 1291538 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=231168.000000 s hg38.chr17_GL383563v3_alt 149438 322 + 375691 GGCGAGTGTTTCTTACGGCAGCTCGAGGAAGGTAGAAGGTGGT-GGGGAAACGTGATTGGGCGAAGAGAACAAGGTCAGTGGAGTGAGCGGGGACCTGAGCCAGGCATGTCATTCCAACCCCGCTCCATGgtctcgcgataagatgctcctttcctccaggtaccagcagggcgcttctcgcaccaggggcttc----cgacctgcttcaggggacggtcaaaaagtccttcctgcacatgctcc------ttctcaggtttctccagctgaagacattcagt-cgccaagg---tgtattttggggtagtgtgtcctgaacccATCGCAATACAGC s panTro4.chr17 143786 321 + 82630442 GGCGAGTGTTTCTTACAGCAGCTCGAGGAAGGTAGAAGGTGGT-GGGGAAACGTGATTGGGCGAAGAGAACAAGGTCAGTGGAGTGAGCGGGG-CCTGAGCCAGGCATGTCGTTCCAACCCCGCTCCATGgtctcgcgataagatgctcctttcctccaggtaccagcagggcgcttctcgcaccaggggcttc----cgacctgcttcaggggacggtcaaaaagtccttcctgcacatgctcc------ctctcaggtttctccagctgaagacattcagt-tgccaagg---tgtattttggggtagtgtgtcctgaacccATCGCAATACAGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40407 335 + 73212453 GACGAGTGTTTCTTACGGCAGCTCGAGGAAGGTAGAAGGTGGC-GGGGAAACGTGATTGGGCGAAGAGAACAAGGTCGGTGGAGTGAGCGGGGACCTGAGCCAGGCATGTCGTTCCGACCCCACTCCATGgtctcgcgataagatgctcctttcctccaggtaccagcagggcgcttctcgcacgaggtgtttccggtcgacctgcttcaggggaagggcaaaaagtccttcctgcgcatgctccttctctttctcaggtttcttcagctgaaggcattcagt-tgccaaggtgctgtgttttggggtagtgtgtcctgaacccATCGCAATACAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 102983 325 - 81552678 GACGAGTGTTTCTTACGGCAGCTGGAGGAAGGTAGAAGGTGGCGGGGGAAACGTGATTGGGCAAAGAGAACGAGGTCAGTGGAGTGAGCGGGGACCTGTGCCAGGCatgtctttgcgcccccactccatggtctcgcgataagatgctgctttcctccaggtaccagcagggcgcttctcgcacgaggggcttc----cgacctgcttcaggggaaggtcaaaaagcccttcctgcgcgtgctcc------gtctcaggtttcttccgctgaagacattcagt-tgccaaggtgctgtactttggggtagtgtgtcctgaa-cCATCACAATACAGA i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 886965 313 - 1291538 gatgagtatttcttagagcagctcgatgagggcagaaggtggt-ggagaaccgtgcttgggtgaagagagcacggtcagtgaagcgagtgggggcctgagccaggcctgttgctccgaccctgctcctcgtcctcatgataagatgctcctttcctctgggtatcacgagagtgcttctcgcatgaggggcttc----tgacctgcttcaggggaaggtcgaacagtccttcttgcacctgctcc------ttctcaaatttcttcagctgaagacactcactgggccgaagtactctattctagggtagtatttccagaaccc------------- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644563 0 - 61074082 C e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=65742.000000 s hg38.chr17_GL383563v3_alt 149760 79 + 375691 GAACAGGTCAGC-GGCAGCCACTCTGCTGGCGGCA--------------TCCCAAACTGCCCTCCGGAACTTCCTGT-------CTCCCACCCAGGGGGCT s panTro4.chr17 144107 79 + 82630442 GAACAGGTCAGC-GGCAGCCACTCTGTTGGCGGCA--------------TCCCAAACTGCCCTCCCGAACTTCCTGT-------CTCCCACCCAGGGGGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40742 79 + 73212453 GAACAGGTCAGC-GGCAGCCACTCTGTGGGCGGCA--------------TCCCAAACTGCCCTCCGGAACTTCCTAT-------CTCCCACCCAGGGAGCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 103308 79 - 81552678 GAACAGGTCAGC-GGCAGCCACTCTGTTGGCGGCA--------------TCCCAAACTGCCCCCCGGAACTTCCTGT-------CTCCCCCCCAGGGAGCT i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 887278 61 - 1291538 -----------------GCCACTGTGCTGGCAGCA--------------TCCCAAACAGCCCTCTGGAACTTCCTGT-------CTCC--ACCAGGGAGCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15644563 101 - 61074082 GAACAGGTCAAAGGGGAGCCCCTATGTTGGCAGAAGGGGTGGGCATGGGTCTGAGACTGCCCCCTAGGACTTCCTGTGCCCCCACCCTCACCCCAGGCACT i canFam3.chr9 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e chlSab2.chr16 71104 1 + 75148670 I e papAnu2.chr16 80544 1 + 74645514 I e rheMac3.chr16 70148 1 + 80904711 I e macFas5.chr16 70909 1 + 80997621 I a score=632769.000000 s hg38.chr17_GL383563v3_alt 149839 201 + 375691 CTGGGGAACACAGCGAGGGA--------------------CTCTCTCGTCTCACAGACGGGGAGTGACAAACACGGAGGGCTCGAGGCAGGGCCGGGATGTGAACCTGTGTCCCAGACGCCCGGTCAGGCACTCCTGCCACCTCCGCAGGCTGCCCCTCCACAGAG--TCAGAGGACTCATCCCGGTCGGCCTGGACTATCGATCGGGCTGCACTTACAGAGT s panTro4.chr17 144186 203 + 82630442 CTGGGGAACACAGCGAGGGA--------------------CTCTCTCATCTCACAGACGGGGAGTGACAAACACGGAGGGCTCGAGGCAGGGCCGGGATGTGAACCTGTGTCCCAGACGCCCGGTCAGGCACTCCTGGCACCTCCCCAGGCTGCCCCTCCACAGAGAGTCAGAGGACTCATCCCGGTCAGCCTGGACTGTCGATCTGGCTGCACTTACAGAGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 40821 203 + 73212453 CTGGGGAACACAGCGAGGGA--------------------CTCTCTCATCTCACAGACGGGGAGTGACAAACACGGAGGGCTCGAggcagggccaggatgtgaacctgtgtcccagacgcccggtcaggcactcctgccacctccccaggctgcccctcCACAGAGAGTCAGAGGACTCATCCCAGTCGGCATGGACTGTTGATCTGGCTGCACTTACAGAGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 103387 203 - 81552678 CTGGGGAACACAGCGAGGGA--------------------CCCTCTCATCTCACAGACGGGGAGTGACAAACACGGAGGGCTCGAggcagggccaggatgtgaacctgtgtcccagacgcccggtcaggcactcctgccacctccccaggctgcccctcCACAGAGAGTCAGAGGACTCATCCCGGTCGGCCTGGACTGTTGATCTGGCTGCACTTACAGACT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 70149 201 + 80904711 CTGGGGAACACAGTGAGGGA--------------------CTCTCTCATCTCACAGGCGGGGAGTGACAAACACGGAGGGCTCGAGGCAGGGCCAGGATGTGAACCTGTGTCCCAGACGCCCGGTCAGGCACTCCTGCCACCTCCCCAGGAGGCCCCTCTGCAGAG--TCAGAGGACTCATCCCGGTCGGCCTGGACCGTTGATCTAGCTGCACTTACAGAGT i rheMac3.chr16 I 1 C 0 s macFas5.chr16 70910 201 + 80997621 CTGGGGAACACAGTGAGGGA--------------------CTCTCTCATCTCACAGGCGGGGAGTGACAAACACGGAGGGCTCGAGGCAGGGCTAGGATGTGAACCTGTATCCCAGACGCCCGGTCAGGCACTCCTGCCACCTCCCCAGGAGGCCCCTCTGCAGAG--TCAGAGGACTCATCCCGGTCGGCCTGGACCGTTGATCTAGCTGCACTTACAGAGT i macFas5.chr16 I 1 C 0 s papAnu2.chr16 80545 201 + 74645514 CTGGGGAACACGGTGAGGGA--------------------CACTCTCATCTCACAGGCGGGGAGTGACAAACACGGAGGGCTCGAGGCAGGGCTAGGATGTGAACCTGTGTCCCAGACGCCCGGTCAGGCACTCCTGCCACCTCCCCAGGAGGCCCCTCTGCAGAG--TCAGACGACTCATCCCGGTCGGCCTGGACCGTTGATCTAGCTGCACTTACAGAGT i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 71105 201 + 75148670 CTGGGGAACACGGTGAGGGA--------------------CTCTCTCATCTCACAGGCGGGGAGTGACAAACACGGAGGGCTCGAGGCAGGGCCAGGATGTGAACCTGTGTCCCAGACGCCCGGTCAGGCACTCCTGCCACCTCCCCAGGAGGCCCCTCTGCAGAG--TCAGAGGACTCATCCCGGTCGGCCTGGACTGTTGATCTAGCTGCACTTACAGAGT i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 887339 179 - 1291538 ------------CTGAGGAA--------------------CTCTCTTGTCTCACACAC--AGAGTGACAAACCCGGAGGACTCGAAGCAGGGCTAGGATTCAGACCTGTGT---------CCAGTCAGGCACT-CTGCTGCCTCCCCAGGCAGCCCCTCCACAGAGGGTCAGAGGATTCATCCCGTCCAGCCGTGACAGTTGAGCTGGCTGCACTTACAGAGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15644664 212 - 61074082 CTGGGGAACATGATTAGAGAAAACTTTCTATTTGGTTCAGTTCCCCCGTCTCATGGATGGGGCGTGACAAAAGCAGAGGGCTGGCAGCAGGGCCAGGATGAGGGCCCATGTCCCACATTGCCAGGCAGGGGCTCCGGCCCCCAGCCCAAGTGG---------AGAG--CTGAAGGACTCTCTTCATCCGGCCTCCACGGAGGATCCGGCCCtactcacagagt i canFam3.chr9 C 0 I 8 e mm10.chr11 75817911 5348 + 122082543 I a score=1085154.000000 s hg38.chr17_GL383563v3_alt 150040 424 + 375691 CTGCGCCCGGAAAGACAGCCAGGCCAGGcaggacccgctccacgatcccaggacctggtgcacaatgaaaatggggggac--cgttattcaacctaacaaagcgtttccagatggcgacagcagatcgctgaaccgagcccagggccctg------tgtgcttgcccagggcgcatgcccatgctgccggcACCGAGGCCAGGAGGGCTCCAAACATCAGGGGAACAGCTGAAGCTCCCGGGGCAGGGGATGGTGCTGGAGGCCAGTGAGGGGCTCAGGAGGA--TGGCATCCTGCGTTCAAAGGAAAGGCAaacccttgtgtatcgctggtgggcgtgtaaagtggtac-gcctcagtggact--------atggttctaaaaacaattcaccttagaattaccatatgatccaacaattcctct---tgggtattttttttttt s panTro4.chr17 144389 424 + 82630442 CTGCGCCCGGAAAGACAGCCAGGCCAGGcaggacccgctctacgatcccagggcctggtgcaaaatgaaaatggggggac--cgttattcaacctaacaaagcatttccagatgacgacagcagatcactgaaccgagcccagggccctg------tgtgcttgcccagggcgcatacccatgcggccggcACCGAGGCCAGGAGGACTCCAAACATCAGGGGAACAGCTGAAGCTCCCGGGGCAGGGGATGGTGCTGGAGGCCAGTGAGGGGCTCAGGAGGA--TGGCATCCTGCGTTCAAAGGAAAGGCAaacccttgtgtatcgctggtgggagtgtaaaggggtac-gcctcagtggact--------atggttctaaaaacaattcaacttagaattaccatatgatccaacaattcctct---tgggtattttttttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 41024 426 + 73212453 CTGCGCCCAGAAGGACAGCCAGGCCAGGcaggacccgctctacgatcacagggcctggtgcaaaatgaaaatggggggacctcgttattcaacataacgaagcatttccagatggcgacagcagatcactgaaccgagccgagggccctg------tgtgcttgcccagggcgcatgcccatgcggccggcACGGAGGCCAGGAGGACTCCAGACATCACGGGAACAGCTGAAGCTCCTGGGGCAGGGGATGGTGCTGGGGGCCAGTGAGGGGCTCAGGAGGA--TGGCATCCTGCattcaaaggaaaggcaaacccttgtgtatcgctagtgggagtgtaaagtggtac-gcctcagtagact--------atggttctaaaagcaattcaacttagaattaacatatgatccaacaattcctct---tgggtattttttttttt i ponAbe2.chr17 C 0 I 14 s nomLeu3.chr19 103590 411 - 81552678 CTGCGCCCAGAAGGACAGCCAGGCCAGGcaggacccgctctaggatcacagggcctggtgcaaaatgaaaacggggggac--cgttattcaacataacgaagcatttccagatggcgacggcagatcactgaaccgagcccagggccctg------tgtgcttgcccagggtgcatgcccatgcggccg------------gGAGGACTCCAGATATCACGGGAACAGCTGAAGCTCCTGGGGCAGGGGATGGTGCTGGGGGCCAGTGAGGGGCTCAGGAGGATGTGGCATCCTGCGTTCAAAGGAAAGGCAaacccttgtgtatcgctggtgggagtgtaaagtggtgc-gcctcggtggact--------atggtcctaaaaacaattcaacttagaattaccatatgatccaacaattcctct---tgggtatttttttt--- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 70350 401 + 80904711 CTGTGCCCAGAAAGACAGCCAGGCCAGGcagggcccgctctacgatcacagggcctggtgcaaaatgaaaacagggggac--ccttattcaacgaaacgaagcatttccagatggcgacagcaggtcactgagccgagcccagggccctg------cctgcttgcccagggtgcatgcccatgcagcca------------------------gcATCACGGGAACAGCTGAAGCTCCTGGGGCAGGGGACGGTGCTGGGGGCCAGTGCAGGGCTCAGGAGGA--TGGCGTCCTGTGTTCAAATGAAAGGCAGacctttgtgtatcgctggtgggagtgtgaagtggtacggcctcagtggact--------atggtcctaaaaacaagccaacgtacaattaccatatgatccaacaattcctct---tgggtattttttttttt i rheMac3.chr16 C 0 I 312 s macFas5.chr16 71111 401 + 80997621 CTGTGCCCAGAAAGACAGCCAGGCCAGGcagggcccgctctacgatcacagggcctggtgcaaaatgaaaacagggggac--ccttattcaacgaaacgaagcatttccagatggcgacagcaggtcactgagccgagcccagggccctg------cctgcttgcccagggtgcatgcccatgcagcca------------------------gcATCACGGGAACAGCTGAAGCTCCTGGGGCAGGGGACGGTGCTGGGGGCCAGTGCGGGGCTCAGGAGGA--TGGCGTCCTGTGTTCAAATGAAAGGCAGacctttgtgtatcgctggtgggagtgtgaagtggtacggcctcagtggact--------atggtcctaaaaacaagccaacctacaattaccatatgatccaacaattcctct---tgggtatttttttttta i macFas5.chr16 C 0 I 1 s papAnu2.chr16 80746 401 + 74645514 CTGTGCCCAGAAAGACAGCCAGGCCAGGCAGGGCCCACTCTACAATCACAGGGCCTGGTGCAAAATGAAAACAGGGGGAC--CCTTATTCAACGAAACGAAGCATTTCCAGATGGCGACAGCAGATCACTGAGCCGAGCCCAGGGCCCTG------CCTGCTTGCCCAGGGTGCAAGCCCATGCGGTCA------------------------GCATCACGGGAACAGCTGAAGCTCCTGGGGCAGGGGATGGTGCTGGGGGCCAGTGCGGGGCTCAGGAGGA--TGGCGTCCTGTGTTCAAATGAAAGGCAGACCCTTGTGTAtcgctggtgggagtgtgaagTGGTATGGCCTCAGTGGACT--------ACGGTCCTAAAAACAAGCCAACCtacaattaccatatgatccaacaattcctct---tgggtaattttttttta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 71306 400 + 75148670 CTGTGCCCAGAAAGACAGCCAGGCCGGGcagga-ccgctctacgatcacagggcctggtgcaaaatgaaaacggggggac--cctcattcgacaaaacgaagcatttccagatggcgacagccgatccctgagccgagcgcagggccctG------CCTGCTTGCCCTGGGTGCATGCCCACGCGGCCA------------------------GCATCACGGGAACAGCTGAAGCTCCTGGGGCAGGGGACGGTGCTGGGGGCCAGTGCGGGGCTCAGGAGGA--TGGTGTCCTGTGTTCAAATGAAAGGCAGacctttgcgtatcgctggtgggagtgtgaagtggtacggcctcagtggact--------atggtcctaaaagcaagtcaacctacaattaccatatgatccaacaattcctcc---tgggttttttttttttt i chlSab2.chr16 C 0 I 4 s calJac3.chrUn_GL286409 887518 435 - 1291538 CTGTGCCCAGGAAAA-AGCCAGGCTAGGcaggacccgccctatgattgtagggcctggtgcaaaataaaaat-gggggac--ccttattcaacatgatgaagtgttttcagatggtgacagcagatcactgaaccaagcccagggcccttcGAGTCCCTTCTTGCCCACAACGTGTGTCCACA-GGCCAGCACTGAGGCCAGGAGGGCTCCAGCCATCACAGGAAGAGCCGAAGCTCCCGGGGGCGGGGGT-GCACTCTGGGCTAGTGAGGGGCTCAGGAGGA--TGGCATCCTGCTTTAAAAGGAAAGGCAGaccc-tgcatattgctggtgggcatgtgaagtggtga-gcctcagcgaactgtgctatggtggacctaaaaacaatt-aacttataatttccataggatccaacaattcctctgggtagctatttatttattt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644876 8 - 61074082 I a score=39687.000000 s hg38.chr17_GL383563v3_alt 150464 14 + 375691 -------------aagacaagttctgg s panTro4.chr17 144813 14 + 82630442 -------------aagacaagttctgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 41464 14 + 73212453 -------------aagacaagttctgg i ponAbe2.chr17 I 14 C 0 s nomLeu3.chr19 104001 14 - 81552678 -------------aagacaagttctgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 71063 14 + 80904711 -------------aagacaagttctga i rheMac3.chr16 I 312 C 0 s macFas5.chr16 71513 14 + 80997621 -------------aagaCAAGTTCTgg i macFas5.chr16 I 1 I 410 s papAnu2.chr16 81147 14 + 74645514 -------------aagacaagttctga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 71710 14 + 75148670 -------------aagacaagttctga i chlSab2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 887953 27 - 1291538 atttatttatttagagacaagttcggg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644876 8 - 61074082 I a score=152366.000000 s hg38.chr17_GL383563v3_alt 150478 50 + 375691 ctctgtcacccaggctggagtgcaatggcatgatcatggctcactgcagc s panTro4.chr17 144827 50 + 82630442 ctctgtcacccaggctggagtgcaatggcatgatcatggctcactgcagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 41478 50 + 73212453 ctctgtcactcaggctggagtgcaatggcatgatcatggctcactgcagc i ponAbe2.chr17 C 0 I 3 s nomLeu3.chr19 104015 50 - 81552678 ctctgtcactcaggctggagtgcagtggcataatcatggctcactgcagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 71077 50 + 80904711 ctctgtcactcaggctagagtacagcggcatgatcatggttcactgcagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 71937 50 + 80997621 ctctgtcactcaggctagagtacagcggcatgatcatggttcactgcagc i macFas5.chr16 I 410 C 0 s papAnu2.chr16 81161 50 + 74645514 ctctgtcactcaggctagagtacagcggcatgatcatggttcactgcagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 71724 50 + 75148670 ctctgtcactcaggttggagtacagtggcatgatcatggttcactgcagc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 887980 50 - 1291538 ctctgtcactcaggctggagtgcagctgcacaatcatggctcactgtagc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644876 8 - 61074082 I a score=794343.000000 s hg38.chr17_GL383563v3_alt 150528 356 + 375691 ctcgacttcccaggctcaagctatc-ctcccacctcagcttccctagtagctcgcactgcaggtgtgggccaccatgcctggctaattttttggtatattttgtagagatggggtcttgccacattgcccaggctggtctcaaactcctgggctcaagccatctgcctgcatcagtctcccaaagtgctgggattacaggtgtgagcc--tgtacccagcccactgttgggtatttacccaaaagaattggaagaagggactcaaacagatatctgtacacctatgttcatagcagccttcgtcacagcagccaaaaggtggaaccaacccaagtgtccatcggcagatg-atggatata-------------- s panTro4.chr17 144877 358 + 82630442 ctcgacttcccaggctcaagctatc-ctcccacctcagcttccctagtagctcgcactgcaggtgtgggccaccatgcctggctaattttttggtatattttgtagagatggggtcttgccacattgccgaggctggtctcaaactcctgggctcaagccatctgcctgcatcagtctcccaaagtgctgggattacagatgtgagccactgcacccagcccactgttgggtatttacccaaaagaattggaagaagggactcaaacagatatctgtacacctatgttcatagcagccttcgtcacagcagccaaaaggtggaaccaacccaagtgtccatcggcagatg-atggatata-------------- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 104065 355 - 81552678 ctcgacctcccgggctcaagcgatc-ctcccacctcagcttccctagtagcttgcactacaggtgtgggccaccatgcctggctaattttttggtatattttgtagagatgggatcttgccacattgcccaggctggtctcgaactcctgggctcaagccatctgcctgcatcagtctcccaaagtgctgggattacaggcgtgagccactgcacccggcccactgttgggtatttacccaaaagaattg---gaagggactcaaacagatacctgtacacctgtgttcattacagccttcgtcacagcagccaaaaggtggaaccaacccaagtgtccatcggcagatg-atggatata-------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 71127 357 + 80904711 ctcgacctcccaggctcaagctatc-ctcctacctcagcttccctagcagcttgaactacaggtgtgggccactgtgcctggctaattttttggtatattttgtagagatggggtcttgccacattgcccaggctggtctcaaactcctgggctcgagtcatctgcctgcctcagtctcccaaagtgctgggattacaggcgtgagccactgcgcccggcccactgttgggtatttaaccaaaagaactggaagaagggactcaaacaggtatctgtacaccta-gttcatagcagccttagtcacagcagccgaaacggggaaccaacccaagcgtccatcggcagatg-atggataca-------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 71987 357 + 80997621 ctcgacctcccaggctcaagctatc-ctcctacctcagcttccctagcagcttgaactacaggtgtgggccactgtgcctggctaattttttggtatattttgtagagatggggtcttgccacattgcccaggctggtctcaaactcctgggctcgagtcatctgcctgcctcagtctcccaaagtgctgggattacaggcgtgagccactgcgcccggcccactgttgggtatttaaccaaaagaactggaagaagggactcaaacaggtatctgtacaccta-gttcatagcagccttagtcacagcagccgaaacggggaaccaacccaagcgtccatcggcagatg-atggataca-------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 81211 357 + 74645514 ctcgacctcccaggctcaagctatc-ctcctacctcagcttccctagtagcttgaactacaggtgtgggccactgtgactggctaattttttggtatattttgtagagatggggtcttgccacattgcccaggctggtctcaaactcctgggctcgagtcatctgcctacctcagtctcccaaagtgctgggattacaggcgtgagccactgcgcccggcccactgttgggtatttacccaaaagaactgCAAgaagggactcaaacagatatctGTACACCTA-GTGCATAGCAGCCTTAGTCACAGCAGCCAAAAGGTGGAACCAACCCAAGCGTCCATCGGCAGATg-atggataca-------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 71774 357 + 75148670 ctcgacctcccaggctcaagctatc-ctcctacctcagcttccctagtagcttgaactacaggcgtgggccactgtgcctggctaatttttcggtatatttggtagagatggggtcttgccacattgcccaggctggtctcgaactcctgggctcaagtcatctgccctcctcagtctcccaaagtgccgggattacaggcgtgagccactgcgcccagcccaccgttgggtatttacccaaaagaactggaagaagggactcaaacagacatctgtacaccta-gttcatagcagccttagtcacagcagccaaaacggggaaccaacccaagcgtccgtcggcagatg-atggataca-------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 888030 363 - 1291538 cccgacctcccaggctcaagtgggaggccccatctcagcctctgtagtagcttggactacaggtgtgggccaccatgcctggctaattttt--gtatattttatagagatggggccttgccacattgcctaggctagtcttgaactcctgggcttaagccatctgcccacatcagtctcccaaagggctgggattataggcacgagtcactgcacccagcccactcttgggtatttacccaaaataattagaagaagggactcagacaggtacctgtacactgctgttcacagcagccttagtcacagcagcc-aaaggtggaaacaacccaa--------tgacaggtgaatggattcacagtgtggtgtgta i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644876 8 - 61074082 I e ponAbe2.chr17 41528 3 + 73212453 I a score=21170.000000 s hg38.chr17_GL383563v3_alt 150884 11 + 375691 cac------aaatatca s panTro4.chr17 145235 11 + 82630442 cac------aaatatca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 41531 11 + 73212453 cac------Aaatatca i ponAbe2.chr17 I 3 C 0 s nomLeu3.chr19 104420 8 - 81552678 cac------aaat---a i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 71484 11 + 80904711 cac------acatatca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 72344 11 + 80997621 cac------acatatca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 81568 11 + 74645514 cac------acatatca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 72131 11 + 75148670 cac------acatatca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 888393 17 - 1291538 caccccaaggaatatca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e canFam3.chr9 15644876 8 - 61074082 I a score=2151649.000000 s hg38.chr17_GL383563v3_alt 150895 719 + 375691 ttcagccgtaaaatggaataaaaatcc--gacgtgctccaacaggaataggccttgaaaacacgatgttacgtgaaagacgccagacacaaaaggacaaat---atatgattccacttatatgagaaaccc--ggggtagtcagcaatagagacagaaagtggaaatgtggttac----tggggctgggggagggg----------aaatgggt------agtcgtttatgggatcac-ggaaagttctggaaatggatgatggtaatggttacacactgttgtgaatgtacttcatgccactgaactatatacttaaa-------------------TTCTATGTAATGTTGCTGCAATTTTTAAAAAGGGG------AGGCAGGTGCTTGTGGGAAAA--TGAGACAACTTTGGGAGCCTGTGAGCGGCGCTGGGGGCCCAAGGGAT--CAGCTCCCCTTCTTGGAGTTCAGGTGCCACGTTCCATGGCCCAGCTCCCACAGCCCTCCTTGAGGTTGAAGGTCAGCCTGGAGACAGGCTCTGGGCTCCAAAGGCCCTGAGAGCCCGCTTGATCCATGGAAGCTACTGGAAACTCTCCCAGCCAAAGCCACCCCTGCACCTGCAAGGGC----------------------GGCTGCTTCAAGGAACCCACCCCCAA-GTGCCGACGAAGGAAGGCTGAGCTCAGAACCTGGGGCTCGCAGCCAGGTGGGGCCGCGGACATGAGACCGTTTTCAGAATGGGGGCAAAATCTCTGCATT--GCCTGAGACTTACCCTCATT s panTro4.chr17 145246 718 + 82630442 ttcagccgtaaaatggaataaaaata---gacgtgctccaacaggaataggccttgaaaacacgatgttacgtgaaagacgccagacacaaaaggacaaat---atatgattccacttatatgagaaaccc--ggggtagtcagcaatagagacagaaagtggaaatgtggttac----tggggctgggggagggg----------aaatgggt------agtcgtttatgggatcac-ggaaagttctggaaatggatgatggtaatggttacacactgttgtgaatgtacttcatgccactgaactatatacttaaa-------------------TTCTATGTAATGTTGCTGCAATTTTTAAAAAGGGG------AGGCAGGTGCTTGTGGGAAAA--TGAGACAACTGTGGGAGCCTGTGAGCGGCGCTGGGGGCCCAAGGGAT--CAGCTCCCCTTCTTGGAGTTCAGGTGCCACGTTCCATGGCCCAGCTCCCACAGCCCTCCTTGAGGTTGAAGGTCAGCCTAGAGACAGGCTCTGCGCTCCAAAGGCCCTGAGAGCCCACTTGATCCATGGAAGCTACTGGAAACTCTCCCAGCCAAAGCCACCCCTGCACCTGCAAGGGC----------------------GGCTGCTTCAAGGAGCACACCCCCAA-GTGCCGACGAACGAAGGCTGAGCTCAGAACCTGGGGCTCGCAGCCAGGTGGGGCCACGGACATGAGACCGTTTTCAGAATGGGGGCAAAATCTCTGCATT--GCCTGAGACTTACTCTCATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 41542 713 + 73212453 ttcagctgtaaaatggaataaaaatccgaggggtgctccaacagaaatgggccttgaaaacacgatgttacgtgaaagacaccagacaaaaaaggacaaat---atatgattccacttatatgagaaaccc--aggttagtcatcaatagagacagaaagtggaaaggtggttac----tggggctgggggagggg----------aaacgggt------agttgtttatgggatcac-ggaaagctctggaaatggatg------atggttacacactgttgtgaaggtacttcatgccgctgaactgtacacttaaa--------------------tatATGTAATTTTGCTGCAATTTTTAAAAAGGGG------AGGCAGGTGCTTGTGGGAAAA--TGAGACAACTGTGGGAGCCTGTGAGCGGCGCCGGGGGCCCAAGGGAT--CAGCTCCCCTTCTTGGAGTTCAGGTGCCACGTTCCATGGCGCGGCTCCCACA-CCCTCCTTGAGGTTGAAGGTCAGCCTAGAGACAAGCTCTGGGCTCCAAAGGCCCTGAGAGCCTACTTGATCCATGGAAGCTACTGGAAACTCTCCCAGCCAAAGCCACCCCTGCACCTGCAAGGGC----------------------GGCTGCTTCAATGAACCCACCCCCAA-GTGCCGACAAAGGAAGGCTGAGCTCAGAACCTGGGGCTCGCAGCTGGGTGGGGCCACGGACATGAGACCGTTTTCAGAATGGGGGCAAAATCTCTGCATT--GACTGAGACTTACTCTCATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 104428 699 - 81552678 ttcagccgtaaaatggaataaaaatccgacgggtgctccaacaggaacgggccttgaaaacacgatgttacgtggaagacgccagacacaaaagaacaaat---atatgattccacttacatgagaaaccc--agggtagtcagcaataaagacagaaagtggaaaggtggttac----tggggctgggggagggg----------aaacgggt------a---gtttataggatcac-ggaaagttctggaaatggatgacggtaatggtt----actgtcgtgaatgtacttcatgccactgaactatacacttaaa-------------------ttctatgtaattttgctgcaatttttaaaaAGGGG------AGGCAGGTGCTTGTGGGAAAA--TGAGACAACTGTGGGAGCCTGTGAGCGGCGCT-GGGATCCAAGGGAT--CAGCCCCCCTTCTCGGAGTTCAGGTGCCACGTTCCATGG--------------CCCTCCTTGAGGTTGAAGGTCAGCCTAGAGACAGGCTCTGGGCTGTAAAGGCCCTGAGAGCCCACTTGATCCATGGAAGCTACTGGAAACTCTCCCAGCCAAAGCCACCCCTGCACCTGCAAGGGC----------------------GGCTGCTTCAATGAACCCACCCCCAA-GTGCCGACGAAGGAAGGCTGAGCTCAGAACCTGGGGCTCGCAGCCAGGTGGGGCCACGGACATGAGACCGTTTTCAGAGTGGGGGCAAAATCTCTGCATT--GACTGAGACTTACTCTCATT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 71495 719 + 80904711 ttcagccataaagtggaataaaaatcggacaggtgctccaacaggaatgggccctgaaaacatgatgttaagtgaaagacgccagacacaaaaggacaaat---atatgattccacttacatgaggaaccc--agggtggtcagcgacagggacggaaactggaagggtggttcc----tggggctgggggaggcg----------aaacgggg------agttgtttatgggatcatgggaaagttctggaaatgtttgatggtaatggttacacactgctgtgaatgtacttcacgccactgaactatacacttaaa-------------------TTCTACCTAATTTTGCTGCAATTTTTAAAAAGGGG------AGGCAGGTGCTTGTGGGAAGA--CGAGACAACTGTGGGAGCCTGTGGGCGGTGCTGGGGGCCCGAGGGAT--CAGCTCCCCTTCTTGGA-TTTAGGTGCCACGTTCCGTGGCCCGGCTCCCACAGCCCTCCTTGAGGTCGAAGGTCAGCCTAGAGACAGGCCCTGGGCTTCAAAGGCCCTGAGAGCCCACTTCATCCATGGAAGCTGCTGGAAACCCTCCCAGCCAAAGCCACCGCTGCACCTGCAAGGGC----------------------GGCTGCTTCAGTGAACCCACCCCCAA-GTGCCCACGAAGGAAGGCTGAGCTCCGAACCTGGGGCTCACAGCCAGGTGGGGCCACGGACACGAG--AGTTTCCGGAACGGGGGCGAAATCTCTGCATT--GACTGAGACTCACTCTCATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 72355 721 + 80997621 ttcagccataaagtgcaataaaaatcggacaggtgctccaacaggaatgggccctgaaaacatgatgttaagtgaaagacgccagacacaaaaggacaaat---atatgattccacttacatgaggaaccc--agggtggtcagcgacagggacggaaactggaagggtggttcc----tggggctgggggaggcg----------aaacgggg------agttgtttatgggatcatgggaaagttctggaaatgtttgatggtaacggttacacactgctgtgaatgtacttcacgccactgaactatacacttaaa-------------------TTCTACCTAATTTTGCTGCAATTTTTAAAAAGGGG------AGGCAGGTGCTTGTGGGAAGA--CGAGACAACTGTGGGAGCCTGTGGGCGGTGCTGGGGGCCCGAGGGAT--CAGCTCCCCTTCTTGGA-TTTAGGTGCCACGTTCCGTGGCCCGGCTCCCACAGCCCTCCTTGAGGTCGAAGGTCAGCCTAGAGACAGGCCCTGGGCTTCAAAGGCCCTGAGAGCCCACTTCATCCATGGAAGCTGCTGGAAACCCTCCCAGCCAAAGCCACCGCTGCACCTGCAAGGGC----------------------GGCTGCTTCAGTGAACCCACCCCCAA-GTGCCCACGAAGGAAGGCTGAGCTCCGAACCTGGGGCTCACAGCCAGGTGGGGCCACAGACACGAGACAGTTTCCGGAACGGGGGCGAAATCTCTGCATT--GACTGAGACTCACTCTCATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 81579 722 + 74645514 ttCAGCCATAAAGTGGAATAAAAATCGGACAGGTGCTTCAACAGGAATGGgccttgaaaacatgatgttaagtgaaagacgccagacacaaaaggacaaat---atatgattccacttatatgaggaacCC--AGGGTAGTCAGCGATAGAGACGGAAAGTGGAAGGGTAgttcc----tggggctgggggaggcg----------aAACGGGG------AGTTGTTTATGGGATCGTGGGAAAGTTCTGGAAATGTTTGATGGTAACGGTTACACACTGCTGTGAATGTACTTCgtgccactgaactatacacttaaa-------------------ttCTACCTAATTTtgctgcaatttttaaaaagggg------aggcagGTGCTTGTGGGAAGA--CGAGACAACTGTGGGAGCCTGTGAGCGGTGCTGGGGGCCCGAGGGAT--CAGCTCCCCTTCTTGGAGTTCAGGCGCCACGTTCCGTGGCCCGGCTCCCACAGCCCTCCTTGAGGTTGAAGGTCAGCCTAGAGACAGGCCCTGGGCTTCAAAGGCCCTGAGAGCCCACTTGATCCATGGAAGCTGCTGGAAACGCTCCCAGCCAAAGCCACCCCTGCACCTGCAAGGGC----------------------GGCTGCTTCAGCGAACCCACCCCCAA-GTGCCCATGAAGGAAGGCTGAGCTTCGAACCTGGGGCTCACAGCCAGGTGGGGCCACGGACACGAGACAGTTTCCGAAACGGGGGCGAAATCTCTGCACT--GACTGAGACTCACTCTCATT i papAnu2.chr16 C 0 I 1224 s chlSab2.chr16 72142 723 + 75148670 ctcagccataaagtggaataaaaatcggacaggtgcgccaacaggaatgggccttgaaaacatgctgttaagtgacagacgccagatacaaaaggacaaat---acatgattccacttatatgaggaaccc--agggtagtcagcgacagagacagaaagtggaagggtggctcc----tggggctgggggaggcg----------aaacgggg------agttgtgtatgggatcatgggaaagttctggaaatgtttgatggtaacggttacacactgctgtgaatgtacttcatgccactgaactatacacttaaa-------------------TTCTACGTAATTTTGCTGCAATTTTTAAAAAGGGG------AGGCAGGTGCTTGTGGGAAGAAGAGAGACAGCTGTGGGAGCCTGTGAGCAGTGCT-GGGGCCCGAGGGAT--CAGCTCCCCTTCTTGGAGTTCAGGCGCCACGTTCCGTGGCCCGGCTCCCACAGCCCTCCTTGAGGTTGAAGGTCAGCCTAGAGACAGGCCCTGGGCTTCAAAGGCCCTGAGAGCCCACTTGATCCATGGAAGCTGCTGGAAACCCTCCCAGCCAAAGCCACCCCTGCACCTGCAAGGGC----------------------GGCTGCTTCAGTGAACCCACCCCCAA-GTGCCCACGAAGGAAGGCTGAGCTCCGAACCTGGGGCTCACAGCCAGGTGGGGCCACGGACACGAGACAGTTTCTGGAACGGGGGCGAAATCTCTGCACT--GACTGAGACTCACTCTCATT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 888410 717 - 1291538 tccagccataaaatggaataaaattccgacaggtgctgcaatagaaattgaccttgaatacactatgtgaagtgaaataagccagacacaaaaggatgaat---atatgatttcacttaggtgaggtaccc--agggtagtcacaga--------gaaagtgggaaggtggttac----tcaggctggggcagggg----------acacggggtacagaggttctgtttgggatcatgggaaagttctggaaatggatgatgatgctggttacacagtgctat-agtgtatttaatgccgctgaactatacccttaaa-------------------ttctatgtaattttGCTGCAATTTTTAAAAAGGGG-------GGCCGGTGCTTGTGGGAAGA--TGAGACAAGTGTGGGCACCTGTGAGTGGCATA-GGAGCCTGAGGGATCACAGCTCTCCTGCTCGGAGCTCAGGTGCCACATCCCACAGCCGGGCTTCCCCAGCCCTCTGAGAGGCTGAAGGTCAGCCCAGAGACAGGCCCTGGGCTCCAAAAGCCCTAAGAGCTCACTTGATCCATGGAAGCTACAGGAAACCCTCCCAGTCAAAGCTGTCCCTGTAGCTGAAAGGGC----------------------AGCTGCTTCCATGAACCCACCCCCAA-GTGCCAACGAAGGAAGACTGAGGTCAGAGCCTGGGGTCCACACCCAGGCTGGGCCACAGACATGAGACAGTTTCCAGAAT-GGGGCGACATCGCAGCACT---ACTGAGACTTACCCTCATT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15644884 783 - 61074082 ttcagccataagatggaaggaaattctgacgtaggttacaacgtggatggaccttgaaaacattccacgaagtaaaataagcctgatgtgaaagaacacatggcgtctgagtccatgtacacgaagtacatggagagtggt-gcttgtaaaggtagagggatgcgcgctggctccccggtggtggtggtggtggggcttgctcagtgggtgtgg------agttcaatttgaaatgaccaaaaagttctggagatggatggtggggatggccgcctgactatgtaaaggtagttaatgtcactgaactgtacatgtaaaaatggctaaaatggttaacttctgtg-gattttgctgcaatAGGGAGAAAAAGGAAAGAAAGGCAGGTG-GCATGGGAAGA--CAAGACAGTTGTGGG-GCTAATAAGATGTGCT-GGGGGCTGAGGAAAGGTAGCTCCCCCTCCTGGAGTTCAGGAGCCAGGTTCA--GGTGCAGCTCCCCTAGGCCTTGGAGGAGCTGCAGGGCAGTCCAGAGACAGGCCCT-CGTGCCAAAGGCCCCGAGAAGCTACTTGATGGATGGAAGCTCTTGGAAACCCTCTAAGCCAAATCCATCCCTGC--CTGCAATTGCCTATACATTGTGGCCGGAAAAGAGCCACTTTACCGAACCCACCCCGGGTGTCCCCAAGAGGCATGATTTATGAGAGCGCCTGGTGTTCTCAGCCACACTGGGCCACGGGCACAGGACAGCGTCCAACATGGGGGCAAAATCTCTGGGCTGTGCCTGAGCCTAATTTTCATT i canFam3.chr9 I 8 C 0 e mm10.chr11 75817911 5348 + 122082543 I a score=12380.000000 s hg38.chr17_GL383563v3_alt 151614 4 + 375691 TGTT s panTro4.chr17 145964 4 + 82630442 TGTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 42255 4 + 73212453 TGTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 105127 4 - 81552678 TGTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 72214 4 + 80904711 TGTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 73076 4 + 80997621 TGTT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 72865 4 + 75148670 TGTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 889127 4 - 1291538 TGTT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15645667 4 - 61074082 TATT i canFam3.chr9 C 0 C 0 e mm10.chr11 75817911 5348 + 122082543 I e papAnu2.chr16 82301 1224 + 74645514 I a score=760078.000000 s hg38.chr17_GL383563v3_alt 151618 347 + 375691 ACATTAGCATTGGGAAAATACCCCAGCGGGACAAGGGGCTGACTTT--CCCCCATCCATCTGGAAGTTTCCATCTGTGCTGCCGACACAGCTGGC---------ATCCTCTGC-CCGCATCCTCTGCCCTTGGAACCC-AACATTTTTCATATCAAACCCTG--GCCTCGCAGTGCAGC----CTGCGGGGCGTGGTCTTTGGCATCCGACTACCCCGATTCCAATT-CGGGCCCTcttgacttctctgggcctcagtttcctcctctgtaaagtgggaacaataaatgtccctgactcatag-----------------gTGGATGGACA-TTCCCCAAAGCTCCT-GCAGGTGCCTGACTCCACAAACGGTGGCCGTGATGGTG s panTro4.chr17 145968 349 + 82630442 ACATTAGCATTGGGAAAATACCCCAGTGGGACAAGGGGCTGACTTT--CCCCCATTCATCTGGAAGTTTCCATCTGTGCTGCCGACACAGCTGGC--------TATCCTCTGC-CTGCATCCTCTGCCCTTGGAACCCCAGCTTTTTTCATATCAAACCCTG--GCCTTGCAGTGCAGC----CTGCGGGGCGTGGTCTTTGGCATCCGACTACCCCGATTCCAATT-CGGGCCCTcttgacttctctgggcctcagtttcctcctctgtaaagtgggaacaataaatgtccctgactcatag-----------------gTGGATGGCCA-TTCCCCAAAGCTCCT-GCAGGTGCCTGACTCCACAAACCGTGGCCGTGATGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 42259 349 + 73212453 ACATTAGCATTGGGAAAATACCCCAGTGGGACAAGGGGCTGACTTT--CCCACATTCATCTAGAAGTTTCCATCTGTGCTGCCGACATAGCTGGC--------TGTCCTCTGC-CTGCATCCTCTGCCCTTGGAACCCTAACTTTTTTCATATCAAGCCCTG--GCCTTGCAGTGCAGC----CTGCGGGGCGTGGTCTTTGGCATCCGACTACCCCGATTCCAATT-CGGGCCCTcttgacttctctgggcctcagtttcctcctctgtaaagtgggaacaataaatgtccctgactcacag-----------------gTGGGCGGCGA-TTCCCCAAAGCTCAT-GCAGGTGCCTGACTCCACAAACGGTGGCCATGATGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 105131 280 - 81552678 ACATTAGCGTTGGGAAAATACCCCCGTGGGACAAGGGGCTGACTTT--CCCCCATTCATCTGGAAGTTTCCATCTGTGCTGCCGACACAGCTGGC----------------------TGTCCTCTGCCCttggaaccccaac-tttttcatatcaaaccccg--gccttgcagt-----------------------------------------------------------ccccttgaccgctctgggcctcagtttcctcctctgtaaagtgggaacaataaatgtccctgactcatag-----------------gCGGGCGGCGA-TTCCCCAAAGCTCAT-GCAGGTGCCTGACTCCAC-AACGGTGGCCGTGATGGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 72218 323 + 80904711 ACATCAGCACTGGGAAAATACCCCAGCGGGACAAGGGGCTGACTTT--CCCCCGTTCACCGAGAAGTTTCCATCTGTGCTGCCGACA---------------------------------CCTCTGCCCTTGGAACCCCAGCTTTTTTCATCTCACACCCTG--GCCTTGCGGTGAAGC----CTGTGGGGCGTGGTTTTTGGCATCTGACCGCCCCGATTCCAAGT-CGGGCCCTctcgacctctctgggcctcagtctcctcctctgaaaagtgggagc-acaaacgtccctgactcctag-----------------gTGGGCAGGGATTTCCCCAAAGCTCAC-GCAGGGGCCTGACTCCACAAACGGTGGCCATGATG--G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 73080 323 + 80997621 ACATCAGCACTGGGAAAATACCCCAGCGGGACAAGGGGCTGACTTT--CCCCCGTTCACCGAGAAGTTTCCATCTGTGCTGCCGACA---------------------------------CCTCTGCCCTTGGAACCCCAGCTTTTTTCATCTCACACCCTG--GCCTTGCGGTGAAGC----CTGTGGGGCGTGGTTTTTGGCATCTGACCGCCCCGATTCCAAGT-CGGGCCCTctcgacctctctgggcctcagtctcctcctctgaaaagtgggagc-acaaacgtccctgactcctag-----------------gTGGGCGGGGATTTCCCCAAAGCTCAC-GCAGGGGCCTGACTCCACAAACGGTGGCCATGATG--G i macFas5.chr16 C 0 C 0 s chlSab2.chr16 72869 330 + 75148670 ACATCAGCACTGGGAAAATACCCCAGCGGGACAAGGGGCTGACGTT--CCCCCATTCATCTAGAAGTTTCCATCTGTGCTGCTGACAC--------------------------CTGCATCCTCTGCCCTTGGAACCCCAGCTTTTTTCATCTCAAACCCTG--GCCTTGCGGTGAAGC----CTGTGGGGCGTGGTCTTTGGCACCTGACCGCCCCGATTCcaagt-cgggcc--ctcgacctctctgggcctcagtttcctcctctgtaaagtgggagc-acaaacgtgcctgactccgag-----------------gtgggtggggattTCCCCAAAGCTCAC-GCAGGTGCCTGACTCCACAAATGGTGGCCATGATGGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 889131 363 - 1291538 ACGTTAGCATTGGGAAAAC-CCCCAGTGGAACGAGGGGCTGACCTT--CTCCCATTCATCTAGAAGTTTCCATCTGTGCTGCCGACTCAGCAGCTGTCC----CCACCTGAGC-CTGCATCCTCTGCCCTTGGAATCCCAAC-TTTTCCATATCAAGCCCTG--GCCTTGC-----AGC----CTGCAGGGTATGCTCTTTGACATCTGACTACCCCGATTCAAATT-TAGGCCCTGTGGacctctcagggcctcagtttcctcctctgtaaaatgggaacaatgaa-gtccctgactcactgccccacCCCCCTACCCCGTAGGCGAGGA-TTCCCTAAAGCTCATGGCAGGTGACTGACTCAACAAAAGGTGGCCTTGATGGTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75823259 336 + 122082543 ACATCAGCAGTAGG-AAATCCTCCAAGGGGACAAGGGGCTGACTTTTGTCCCCTTCCACCTAGAAGTTTCCACGTGTGTTGCTTACATGGCCAGA---------CTGTTCTGCACCGTTTCTGCTACTCTCAGCATCCGGA--TTTGTCCTCGCTAATCCTGCAGCCTC-------AGCCACACAACACAGTACAGTCTTGGGCATCTGTTCACCCTGTGTGCATCTGCAGGCTCTCCTGAGGTCTCTG-------CTCTCCTCCTCTGTACAATGGGAAC-AGTGATGTT-----CTCCTAG-----------------GTGGAGGATGG-CTCCCTGTAGCTGGCAGCAGGTGTCCGACTCAACAAATGGTGGCCATAATAGTT i mm10.chr11 I 5348 C 0 s canFam3.chr9 15645671 333 - 61074082 ACATTAGCAATGGAAAAACACCCCAGTGGGACAAGTGGCTGACTTT--ACCCTATTTATCTAGAAGTTGGGATCTGTGCTGCTGACACAGCCCCACTCCCCTTCTATCTGTGC-CCAGCTCCCCCAGTCTCAGAATCCC-----------TATTAACCCCCC--ACCCTGCACTGAATG--------------TGGTCTTTGGCATCCAACTGCCCTGCATTCAATA-tgggctcttttgactcctctgggtctcagtttcctcttctattaaacaggaacaatagaaatatctgccttatag-----------------gtgggtgagga--tCCCTAAAGCTG---GTAGGTAATTGACTCTCTAGATGGTGGCTATAATGGTG i canFam3.chr9 C 0 I 201 e papAnu2.chr16 82301 1224 + 74645514 I a score=23908.000000 s hg38.chr17_GL383563v3_alt 151965 14 + 375691 ATGGTCATCCCCGC s panTro4.chr17 146317 14 + 82630442 ATGGTCATCCCCGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 42608 14 + 73212453 ATGGTCATCCCCGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 105411 14 - 81552678 ATGGTCATCCCCGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 72541 13 + 80904711 ACGGTCA-CCCCGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 73403 13 + 80997621 ACCGTCA-CCCCGC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 73199 13 + 75148670 ACGGTCA-CCCCGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 889494 14 - 1291538 ATGACCGTCCCAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75823595 14 + 122082543 ATTATCTTTCCCTC i mm10.chr11 C 0 C 0 e canFam3.chr9 15646004 201 - 61074082 I e papAnu2.chr16 82301 1224 + 74645514 I a score=71006.000000 s hg38.chr17_GL383563v3_alt 151979 25 + 375691 ACAGCAAGATGCTTCCTCTCTCCCT s panTro4.chr17 146331 25 + 82630442 ACAGCCAGATGCTTCCTCTCTCCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 42622 25 + 73212453 ACAGCAAGATGCTTCCTCTCTCCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 105425 24 - 81552678 ACAGCAAGATGCTT-CTCTCTCCCT i nomLeu3.chr19 C 0 M 1057 s rheMac3.chr16 72554 25 + 80904711 ACAGGAGGATGCCGCCTCCCTCCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 73416 25 + 80997621 ACAGGAGGATGCCGCCTCCCTCCCT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 73212 25 + 75148670 ACAGGAGGATGCCTCCTCCCTCCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 889508 25 - 1291538 ACAGCAAAATGCTTCCTCTCTCCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75823609 25 + 122082543 AAAGCAAAATGCTTCATGTCTCTCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15646205 25 - 61074082 GCAGCAAAATGCGCCCTCTCTCCCT i canFam3.chr9 I 201 C 0 e papAnu2.chr16 82301 1224 + 74645514 I a score=383854.000000 s hg38.chr17_GL383563v3_alt 152004 224 + 375691 GGCCGTGGCTCCGTGGAACTGAGG---CTGTTTGTTGTCAGCAAACAAAGCCCAGTTGGTGAGAGGAGGT-GGGGGCCGCGGGGAGGGAAGCCCGGGAGCCAGGGAGGGCGTGGCCTGGAGTCC-TGATG--GGCCTCC--CTCCCGGAGCCAG----GCAGCTTCCCTCTCCACAGCCTGCTGTGCC-------------AACACGCCGCTGCCACCGCCGGTTCAC-AGACAGGCTGGAACAGGCAGGA- s panTro4.chr17 146356 224 + 82630442 GGCCGTGGCTCCGTAGAACTGAGG---CTGTTTGTTGTCAGCAAACAAAGCCCAGTTGGTGAGAGGAGGT-GGGGGCCGCGGGGAGGGAAGCGGGGGAGCCAGGGAGGGCGTGGCCTGGAGTCC-TGATG--GGCCTCC--CTCCCGGAGCCAG----GCAGCTTCCCTCTCCACAGCCTGCTGTGCC-------------AACACGCCGCTGCCACCGCCGGTTCAC-AGACAGGCTGGAACAGGCAGGA- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 42647 236 + 73212453 GGCCGTGGCTCCGTGGAACTGAGG-CTCTGTCTGTTGTCAGCAAACAAAGCCCAGTTGGTGAGAGGAGGT-GGGGGCCGCGGCGAGGGAAGC-GGGGACCCAGGGAGGGCGTGGCCTGGAGTCC-TGATA--GGCCTCC--CTCCCGGAGCCAG----GCAGCTTCCCCCTCCACAGCCTGCTGCGCCCTGCCC--GGCAGAACACGCCGCTGCCACCGCCGGTTCCC-AGACAGGCTGGAACAGGCAGGA- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 72579 230 + 80904711 GGCTGTGGCT-CGTGGAACTGAGG-CTCTGTCTGTCGTCGGCAAA-----GTCAGTCAGTGAGAGGAGGT-GGGGGCCGTGGCAAGGGAAGT-GGGGAGCCAGGGAGGGCATGGCCTGGAGTCC-TGATG--GGCCTCC--CTACCCGAGCCAG----GCAGCTTCCTTCTCCTCAGCCTGCTGCACCCGGCCC--GGCAGAACAGGCCGCTGCCACCACCGGTTCAC-CGAGAGGCGGGATCAGGGGGGA- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 73441 230 + 80997621 GGCCGTGGCT-CGTGGAACTGAGG-CTCTGTCTGTCGTCGGCAAA-----GTCAGTCAGTGAGAGGAGGT-GGGGGCTGCGGCGAGGGAAGT-GGGGAGCCAGGGAGGGCATGGCCTGGAGTCC-TGATG--GGCCTCC--CTCCCTGAGCCAG----GCAGCTTCCTTCTCCTCAGCCTGCTGCGCCCGGCCC--GGCAGAACAGGCCGCTGCCACCACCGGTTCAC-CGAGAGGCGGGATCAGGCGGGA- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 73237 230 + 75148670 GGCCGCGGCT-CGTGGAACTGAGG-CTCTGTCTGTCCTTGGCAAA-----GTCAGTCAGTGAGAGGGGGT-GGGGGTCGCGGCGAGGGAAGT-GGGGAGCCAGGGAGGGCGTGGCCTGGAGTCC-TGAGG--GGCCTCC--CTCCCCGAGCCAG----GCAGCTTCCTTCTCCTCAGCCTGCTGCGCCCGGCCT--GGCAGAACAGGCCGCTGCCACCACCGGTTCAC-CGAGAGGCGGGATCAGGCGGGA- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 889533 233 - 1291538 GGCCTTCACTCTGTGGAACTGAGG---CTGTTTGTTGTCAGCAAACAAAACTCAGTTGGGGAGAGGATGT--GGGGCTGCAGCGAAGGAAGCTGGGGAGCCAGGGAGGGCGCTGCCTGGAGTCT-TGATA--GGCCTCC--CTCCTGGAGCCAG----GCAGCTTCCCTCTCTGAAGCCTGCCTCACCTTGCTC--GGCAGAACACACCGCAGCCACCA-TGGTTCAC-AGAGAGCCGGGAACAGGCAGGA- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75823634 200 + 122082543 GGCCTTGGCTCTGTGGAATTGAGA--GCTGTTTGTTGTCAGCAAACAAAGCGCAGCC--TGGGAGGAGGC-AGG-------GTGAGAGGAG--GGGGAGCGAGGGAGGGTGCTGCCTGAAGTCCTTGACGCTGGCCTCCATCGCTCCAAGTGCT----GTAGCTTC---------AGCTGGGTGCACTCGGC------CAGAATG---------CAGCAACGGTTCAC-ATGA-----GGGGCAGACA---- i mm10.chr11 C 0 C 0 s canFam3.chr9 15646230 208 - 61074082 GGCCCTGGCTCAGTGGACTTGAGGGCTCTGCTTGTCCTCTGCAAACAAAG------TGGTGTGAGGAGGTTGGGGAGGGCAGCGAGGGAAGCCAGGGAGTC---------------------CT-TGCTG--GGCCTCC--CT-CTGGAGCCCGCCCAGCAGCTTCTCTCTCA--GTCCTGCTGTACCCGCCCTCAAGCAGAACA---------CAGAGACAATTCATGGGAGAAGCAGAGACAGGCAGAAA i canFam3.chr9 C 0 C 0 e papAnu2.chr16 82301 1224 + 74645514 I e nomLeu3.chr19 105449 1057 - 81552678 M a score=225802.000000 s hg38.chr17_GL383563v3_alt 152228 99 + 375691 CAGATACTGCCGGCATTTGAGGACCCTGAGAGGCACGGGCAGAAA----GCGGGCGTTTTCTCATGTGGGAAAGATGCCGGCCCCCGCTGTTTGGG-GTGGAAA s panTro4.chr17 146580 99 + 82630442 CAGATACTGCCGGCTTTTGAGGACCCTGAGAGGCAAGGGCAGAAA----GCGGGCGTTTTCTCATGTGGGAAAGATGCCAGCCCCCACTGTTTGGG-GTGGAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 42883 99 + 73212453 CAGATACTGCCGGCTTTTGAGGACCGTGAGAGGCAAGGGCAGAAA----GTGGGCGTTTTCTCATGTGGGAAAGATGCCAGCCCCCACTGTTTGGG-GTGGAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106506 98 - 81552678 CAGATACTGCCGGCTTTTGAGGACTCTGAGAGGCAAGGGCAGAAA----GCGGGCGTTTTCTCGTGTGGGGAAGATGCCAGCCCCCGCTGTTTGGG-GTGG-AA i nomLeu3.chr19 M 1057 C 0 s rheMac3.chr16 72809 98 + 80904711 CAGAT-CCGCTGACTTTCCAGAACCCTGAGAAGCAAGGGCAGAAA----GTGGGCGTTTTGTCATGTGGGAAAGGCGCCAGCCCCCGCTTTTTGGG-GTGGAAA i rheMac3.chr16 C 0 I 3 s macFas5.chr16 73671 98 + 80997621 CAGAT-CCGCCGACTTTCCAGAACCCTGCGAAGCAAGGGCAGAAA----GTGGGCGTTTTGTCATGTGGGAAAGGCGCCAGCCCCCGCTTTTTGGG-GTGGAAA i macFas5.chr16 C 0 C 0 s chlSab2.chr16 73467 98 + 75148670 CAGAT-CCGCCGACTTTCCAGAACCCTGAGAAGCGAGGGCAGAAA----GTGGGCGTTTTGTCACGTGGGGAAGGCGCCAGGCCCCGCTTTTTGGG-GCAGAAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 889766 98 - 1291538 CAAATAGGGCAGGCTGTTGAGAACCCTGAGAGGCAAGGCCAGAAA----GTGGGCATTTTCTCAGGTGGGCAGGATGCTTGCCTCCACT-TCTGGG-GTGGAAA i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75823834 104 + 122082543 CAGATAGTATAGGCTCCAGAGAACCTGCAGATATGATTTCAGACATTGTGTGTGTGTGTTTGCTTTAGGGAAGGACACCTGCCCCCATTTTGGGGGAATGGAAA i mm10.chr11 C 0 I 1 s canFam3.chr9 15646438 95 - 61074082 CAGAGACCTCCGGCTTCTGGGAGCCTTGAGCTGCAATGCCTGGAA----GGGGGTGTTTTCTCAT-TGGGGAAGATCTCG--CCCCACTTTGTGGG--TACAAC i canFam3.chr9 C 0 C 0 e papAnu2.chr16 82301 1224 + 74645514 I a score=34886.000000 s hg38.chr17_GL383563v3_alt 152327 24 + 375691 TCCTCTAACCCGCTGGGCCTGTGC s panTro4.chr17 146679 24 + 82630442 TCCTCTAACCCGCTGGGCCTGTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 42982 24 + 73212453 TCCTCTAACCCTCTGGGCCTGTGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106604 24 - 81552678 TCCTCTAACCCGCTGGGCCTGTGC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 73565 24 + 75148670 TCCTCTAACCAGCTGGGCCTGTGC i chlSab2.chr16 C 0 I 71 s calJac3.chrUn_GL286409 889865 24 - 1291538 GGCTCTAACCTGCTGGGCCTGTGC i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75823939 24 + 122082543 GGCTCAAATGTGCTGAGCATGTCT i mm10.chr11 I 1 I 30 s canFam3.chr9 15646533 21 - 61074082 AGCCCTCACCTGCTGGGC-TGT-- i canFam3.chr9 C 0 C 0 e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=36033.000000 s hg38.chr17_GL383563v3_alt 152351 53 + 375691 GCCAGGGCTGAGCAACAGCGCGGA-----GCCGTGCATCTGTC-------------GGGGGCGGGACGCGG s panTro4.chr17 146703 53 + 82630442 GCCAGGGCTGAGCAACAGCGCGGA-----GCCGGGCATCTGTC-------------GGGGGCGGGACGCGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43006 53 + 73212453 GCCAGGGCTGAGCAACAGCGCGGA-----GCCCTGCATCTGTC-------------GGGGGTGGGACGCGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106628 52 - 81552678 GCCAGGGCTGAGCAACAGCGCGGA-----GCCGCGCATCTGTC--------------GCGGTGGGACGCGG i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 889889 53 - 1291538 TCCAGGGCTGAGCAACAGCTTGGG-----ATCATGCATCTGTC-------------CCGGTTGGGACACAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75823993 52 + 122082543 ACCAGGGCT--GCACCAGCTAGGGTGGATGCTGAGGAGCTAGC-------------TGAAGC----CACGT i mm10.chr11 I 30 I 6 s canFam3.chr9 15646554 60 - 61074082 GCATGCTCTCGGCTCCAG-----------GCAGCGCATCTGTCCCCCTGCTGATATGGCAGCAGGACTCTG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 73589 71 + 75148670 I e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=46771.000000 s hg38.chr17_GL383563v3_alt 152404 55 + 375691 -----------------CAGCAGGGCTGTGAGGGCTGCGTTTTCTCTGCCAGCCTGATCCGCATC-------CCCTGCC s panTro4.chr17 146756 55 + 82630442 -----------------CAGCAGGGCTGTGAGGGCTGCGTTTTCTCTGCCAGCCGGATCCTCATC-------CCCTGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43059 55 + 73212453 -----------------CAGCAGGGCTGTGAGGGCTGCGTTTTCTCTGCCAGCCGGATCCTCATC-------CCCTGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106680 55 - 81552678 -----------------CAGCAGGGCTGTGAGGGCTGCGTTTTCTCTGCCAGCCGGATCCTCATC-------CCCTGCC i nomLeu3.chr19 C 0 C 0 s mm10.chr11 75824051 54 + 122082543 -----------------CAGGACCTCTGCGGGAGGTACATTTTCTCTGCTGGCTTGGT-CTCATC-------TCCTGTG i mm10.chr11 I 6 C 0 s canFam3.chr9 15646614 75 - 61074082 TCGGAGGTTTGTCCCCTCAGC----TTGTGGGGGCCGCGTTTTCTCTGCCGGTTCAGTCCTCATCACTGCTTCCCTGCC i canFam3.chr9 C 0 I 115 e calJac3.chrUn_GL286409 889942 0 - 1291538 C e chlSab2.chr16 73589 71 + 75148670 I e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=2000.000000 s hg38.chr17_GL383563v3_alt 152459 2 + 375691 CC s panTro4.chr17 146811 2 + 82630442 CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43114 2 + 73212453 CC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106735 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s mm10.chr11 75824105 2 + 122082543 CC i mm10.chr11 C 0 I 590 e canFam3.chr9 15646689 115 - 61074082 I e calJac3.chrUn_GL286409 889942 0 - 1291538 C e chlSab2.chr16 73589 71 + 75148670 I e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=36984.000000 s hg38.chr17_GL383563v3_alt 152461 68 + 375691 TCGGTCGTCTGCCAGTGTCCGTGTATCTTTTGCCCCAGCTGGTGCGGGTTTAGGGATGTCAGCCCCAG s panTro4.chr17 146813 68 + 82630442 TCGGTCGTCTGCCAGTGTCCGTGTATCTTTTGCCCCAGCTGGTGCGGCTTTAGGGATGTCAGCCCCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43116 68 + 73212453 TCGGTCGTCTGCCAGTGTCCGTGTATCTTTTGCCCCAGCTGGTGCGGGTTTAGGGATGTCAGCCCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106737 68 - 81552678 TCGGTCGTCTGCCAATGTCCGTGTATCTTTTGCCCCAGCTGGTGCGGGTTTAGGGCTCTCAGCCCCAG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75824107 590 + 122082543 I e canFam3.chr9 15646689 115 - 61074082 I e calJac3.chrUn_GL286409 889942 0 - 1291538 C e chlSab2.chr16 73589 71 + 75148670 I e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=64342.000000 s hg38.chr17_GL383563v3_alt 152529 129 + 375691 GAGTCACAGGT--------GAGCTGGTTCCAAT--GGGaacc-------------------------tcggcatca---cctgggaactgaa---atatgcattgtc----agccccacggcagacct-------------ctgaatcagaaactccgaggtaggattagt----gtgttctgtgttctaa s panTro4.chr17 146881 129 + 82630442 GAGTCACAGGT--------GAGCTGGTTCCAAT--GGGaacc-------------------------tcggcatca---cctgggaactgaa---atatgcattgtc----ggccccacggcagacct-------------ctgaatcagaaactccgaggtaggattagt----gtgttctgtgttctaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43184 127 + 73212453 GAGTCACAGGT--------GAGCTGGTTCCAAT--GGGaacc-------------------------tcagcatca---cctgggaactgaa---atatgcattgtc----agccccacggcagacct-------------ctgaatcagaaactccgaggtaggatta------gcgttctgtgctctaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106805 127 - 81552678 GAGTCACGGGT--------GAGCTGGTTCCAGT--GGGaacc-------------------------tcagcatca---cctgggaactgaa---atatgcattgtc----agccccacggcagacct-------------ctgaatcaggaactccgaggtagggtta------gcgttctgtgttccaa i nomLeu3.chr19 C 0 C 0 s canFam3.chr9 15646804 188 - 61074082 gagacacaggcagagggagaagcaggctccatgcagggagcccgacgcaggacttgatccccggtctccaggatcacgccctggg--ctgaaggcagatgcttaaccgctgagccacccggttgcccTAGACCAGTCCTTCTTGAGGTGCGATCTCCCAGTGAGGAGCATTGACAGTGCCCAGTGttcaa- i canFam3.chr9 I 115 C 0 e mm10.chr11 75824107 590 + 122082543 I e calJac3.chrUn_GL286409 889942 0 - 1291538 C e chlSab2.chr16 73589 71 + 75148670 I e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=2255.000000 s hg38.chr17_GL383563v3_alt 152658 2 + 375691 ca s panTro4.chr17 147010 2 + 82630442 ca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43311 2 + 73212453 ca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106932 2 - 81552678 cg i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 73660 2 + 75148670 CA i chlSab2.chr16 I 71 C 0 s canFam3.chr9 15646992 2 - 61074082 ca i canFam3.chr9 C 0 C 0 e mm10.chr11 75824107 590 + 122082543 I e calJac3.chrUn_GL286409 889942 0 - 1291538 C e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=225326.000000 s hg38.chr17_GL383563v3_alt 152660 209 + 375691 agtcccttgggtggttcagatgcaGcaggaggac-ggggccatgtccgttttgtccactaccaaacccagggcctagaacactgcacct-gcacca-gcatctgcccgattaatgctcgacagaggaatgaatGTGGATAAGCACCATTATTCCAAAGCCCCAAAGGGAGAAGCATGAAGGTTTACTGTGCCCCGGGTACCAGGCTGCCACC s panTro4.chr17 147012 209 + 82630442 agtcccttgggtggttcagatgcaGcaggaggac-ggggccatgtccgttttgtccactaccaaacccagggcctagaacactgcacct-gcacca-gcagctgcccgattaatgctcgacagaggaatgaatGTGGATAAGCACCATTATTCCAAAGCCCCAAAGGGAGAAGTGTGAAGGTTTACTGTGCCCCGAGTACCAGGCTGCCACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43313 209 + 73212453 agtcccttgggtggttcagatgcaGCGGgggggc-ggggccatgtccgttttgtccactaccaaacccagggcctagaacactgcacct-gcacca-gcagctgcccgattaatgctcgacagaggaatgaatGTGGATAAGCACCATTATTCCAAAGCCCCAAAGGGAGGAGCGTGAAGGTTTACTGTGCCCCGGGTACCAGGCAGCCACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 106934 199 - 81552678 agtcccttgagtggttcagatgcaGC-GGAGGGC-GGGGCCA---------TGTCCACTACCAAACCCCGGGCCTAGAACTCTGCACCT-GCACCA-GCAGCTGCCCGATTAATGCTCCACAGAGGAATGAGTGTGGATAAGCAGCATCATTCCAAAGCCCCAAAGGGCAGAGTGTGGAGGTTTACTGCGCCCCGGGTACCAGGCAGCCACC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 73662 209 + 75148670 AGTCCCTTGGGTGGTTCAGCTGCAGcaggagggc-ggggccacgtctgtttcgtccactaccaaacccagggcctagaacactgcacct-gcacca-gcagctgcccaattaatgctccacgggggaatgaatGTGGATTAGCACCATTATTCCAAAGCCCCAAAGGGAGGAGCGTGAAGGTTTACTGCGCCCCGGGTACCAGGCAGCCACC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75824697 194 + 122082543 AGTCTGTTGAGCAAATCAGGGGCAGCCgagggta-gagaccatgtctgttttgtgccctactgagccccaacctctga---ctgcccctggtccca-gcagctgcctggcaagtggctgatgGCCAGACCAGGGTGG-TGAGCCTCACTGTTCCAAAGCTCCAAAGGGCAGAGTAGGGACATCTTTTGTGCTAC------------ATCACT i mm10.chr11 I 590 C 0 s canFam3.chr9 15646994 189 - 61074082 aacccgtcgggtgattctgatgctaccggagggcagggaccacgt--gttttgtccacgcctgagcttcag-cctctagccctacacttgacaccaggcagctgcccggtgaatact--------ggatggaAGCAGATGAGCATCATTAT--------CCCAAAGGGAAGAGTGT----ATCTAGTATGCCCCCGACTCCATGCAACCACG i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 889942 0 - 1291538 C e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I e macFas5.chr16 73769 0 + 80997621 C a score=-273.000000 s hg38.chr17_GL383563v3_alt 152869 3 + 375691 -CTT s panTro4.chr17 147221 3 + 82630442 -CTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43522 3 + 73212453 -CTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107133 3 - 81552678 -CTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 73769 3 + 80997621 -CTG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 73871 3 + 75148670 -CTG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75824891 3 + 122082543 -ATG i mm10.chr11 C 0 I 1 s canFam3.chr9 15647183 3 - 61074082 GCC- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 889942 0 - 1291538 C e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 72907 3 + 80904711 I a score=90106.000000 s hg38.chr17_GL383563v3_alt 152872 52 + 375691 CTCACGTTCTTATGGCATCTTGACCACTCCTGAGGCACGTG---CCTCA-CTGAAT s panTro4.chr17 147224 52 + 82630442 CTCACGTTCTTATGGCATCTTGACCACTCCTGAGGCACGTG---CCTCA-CTGAAT i panTro4.chr17 C 0 M 595 s ponAbe2.chr17 43525 52 + 73212453 CTCACGTTCTTATGGCATGTTGACCACTCCTGAGACACGTG---CCTCA-CTGAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107136 52 - 81552678 CCCACGTTCTTATGGCATCTTGACCACTCCTGAGGCACGTG---CCTCA-CTGAAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 72910 54 + 80904711 CTCACGTTCTTAGGGCCTCTCGATCACTCCTGAGGCACTCACT-CCTCA-CTGAAT i rheMac3.chr16 I 3 C 0 s macFas5.chr16 73772 54 + 80997621 CTCACGTTCTTAGGGCCTCTCGATCACTCCTGAGGCACTCACT-CCTCA-CTGAAT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 73874 55 + 75148670 CTCCCGTTCTTATGGCATCTCGATCACACCTGAGGCACTCACTGCCTCG-CTGAAT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75824895 49 + 122082543 ATTGTACTCAAATGGCATCTGAATGA---CTGAGGCTGGTA---TCATG-CTTGAA i mm10.chr11 I 1 C 0 s canFam3.chr9 15647186 53 - 61074082 CTCATATTCTTATGTCATCTGAACACCTTGCGGGGCAAGCA---CCACATCTGAGT i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 889942 0 - 1291538 C e papAnu2.chr16 82301 1224 + 74645514 I a score=463485.000000 s hg38.chr17_GL383563v3_alt 152924 307 + 375691 TCTACGGGAGAAACAGCTGGTAGCTGTTGACAtactggtcacggtggtgggagctgtactggggccctcatgttttaaatttcca--gtcatcctgggacggaagtgttatccccatttcacagatgagaaaacagaggcacag---agaag-cacccatactttcaggcactaagtagcagatctgggatttgaaaccagg-gtccaaagttcatgagctctccactTGCGGCCTCTTCTAGGAACCACTTGGGTTATCTGGTATTTGGGACAAATCCAGTCCCTTCCGTATGCCCTGATTTTTACGGATGTC s ponAbe2.chr17 43577 307 + 73212453 TCTACCGGAGAAACAGCTGGTAGCTGTTGACgtgctggtcacggtggtgggagctgtactggggctctcatgttttaaatttcca--ggcatcctgggatggaagtgttatccccatttcacagatgagaaaacagaggcacag---agaag-cacccatactttcaggcactaagtagcagatctgggatttgaaaccagg-gtccaaagttcatgagctctccacttcctgcctctttTAGGAACCACTTGGGTTATCTGGTATCTGGGACAAATCCAGTCCCTTCCGTATGGCCTGATTTTTATGGATGTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107188 306 - 81552678 TCTACTGGAGAAACagctggtagctgttgacgtgcttgtcacggtggtgggagctgtgctggggctctaatgttttaaatttcca--gtcatcctaggaaggaggtgttatccccatttcacagatgagaaaacggaggcacag---agaag-tacccatac-ttcaggcactaagtagcagatctgggatttgaaaccagg-gtccaaagttcatgagctctccacttgctgcctctttTAGGAACCACTTGGGTTATCTGGTATTTGGGACAAATCCAGTCCCTTCTGTACGCCCTGATTTTTACGGATGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 72964 307 + 80904711 TCTACCGGAGAaacagccggtagctgttgacgtgctggtcacggcggtgggagctgtgct-gggctctcacgttttaaatgtccactgtcatcctgagaggggagtgttatccccacttcacagatgagaaaacaggggtacag---agaag-ca-ccatcgtttcaggcactaagcagcagatctgggatttgaaaccagc-gtccagagttcacgagctctCCCCTTGCTGCCTGTTTTAGGAGCCACTTGTGTTATCTGGTATTTAGCACGAATCTGGTCCCTTCTGTACGCCCTGATTTTTACGGACGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 73826 307 + 80997621 TCTACCGGAGAAACAGCCGGGAGCTGTTGACgtgctggtcacggcggtgggagctgtgct-gggctctcacgttttaaatgtccactgtcatcctgagaggggagtgttatccccacttcacagatgagaaaacaggggtacag---ggaag-ca-ccatcgtttcaggcactaagcagcagatctgggatttgaaaccagc-gtccagagttcaCGAGCTCTCCCCTTGCTGCCTCTTTTAGGAGCCACTTGTGTTATCTGGTATTTAGCACGAATCTGGTCCCTTCTGTACGCCCTGATTTTTACGGACGTC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 73929 307 + 75148670 TCTACCGGAGAAACAGCTGGTAGCTGTTGACgtgctggtcatggcggtgggagctgtact-gggctctcacgttttaaatgtccacagtcatcctgagaaggaagtgttatccccatttcacagatgagaagacaggtgtacag---agaag-ca-ccatagtttcaggcactaagcagcagacctgggatttgaaaccagc-gtccagagttcatgagctctccccttgctgcctctttTAGGAGCCACTTGTGTTATCTGGTATTTAGGCCGAATCTGGTCCCTTCTGTGCGCCCTGATTTTTACGGACGTC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75824944 275 + 122082543 TCT-----------TGCTGGGA----CTAACATGCT---------GGTAGGAACT-CACAGGGTCTCTTATGCtttaagtgcccacagatgtcctgtgaaggaaa---tctccccattttatagatgagaaaactgaggcacagcacagaggtcaactatgaactcaggtgctacgaagtggagctgagatcggaaactaggtgtcccaagttcatgagcattctacctgctttctctTTCCAAGACTACCAG-GTTGCTTGCTGTCTGAGATG----------CTTCTGTGCTTCTGGATTTTGACGGACATT i mm10.chr11 C 0 C 0 s canFam3.chr9 15647239 284 - 61074082 TCTACGGGAGTCATAGGTAATAGCAGT------------------GGTTGGAgttttatatgtgctttcaggctttgaatttccatgatggtcctgtga--gaagtatgat-cccatttcatagtggaggaagctgaggcacag---agagg-tacccataatttcagctactaagtggtagag-tgggatttataactagg-tgtccaacttcatgagctctccacttgctatGTGTCTTAGGGA-TACTTGGGTTATCCAGTACTGATGACAAATCAGGTCATGTCTCTACTCCCTGATTTTTGCAGATG-- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 889942 0 - 1291538 C e papAnu2.chr16 82301 1224 + 74645514 I e panTro4.chr17 147276 595 + 82630442 M a score=127912.000000 s hg38.chr17_GL383563v3_alt 153231 55 + 375691 ACAGAA-------CACCTTCCA-CCTTCTACCAGGAAAGGCTCAgttctgaaagctaacttgt s panTro4.chr17 147875 55 + 82630442 ACAGAA-------TACCTTCCA-CCTTCTACCAGGAAAGGCTCAgttctgaaagctaatttgt i panTro4.chr17 M 595 C 0 s ponAbe2.chr17 43884 55 + 73212453 ACAGAA-------CACCTTCCA-CCTTCTACCAGGAAAGGCTCAgttctgaaagctaatttgt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107494 55 - 81552678 ACAGAA-------CACCTTCCA-CCTTCTATCAGGAAAGGCTCCgttctgaaagctaatttgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 73271 55 + 80904711 ACAGAG-------CACCTTCCA-CCTTCTACCAGGAAAGGCTCAgttccgaaagctgatttgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74133 55 + 80997621 ACAGAG-------CACCTTCCA-CCTTCTACCAGGAAAGGCTCAgttccgaaagctgatttgt i macFas5.chr16 C 0 C 0 s chlSab2.chr16 74236 62 + 75148670 ACAGAACACCTTCCACCTTCCA-CCTTCTACCAGGAGAGGCTCAgttctgaaagctaatttgt i chlSab2.chr16 C 0 C 0 s mm10.chr11 75825219 48 + 122082543 GTAGAT-------CACTCTCCA-CTCATCACCATGAAAAGTTCAGT-------GCCAAATGGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15647523 56 - 61074082 ACATAA-------CATTTTCCACCCCCCTGCCAGGAAAGGCCTAGTTCTAAAAGttaattttt i canFam3.chr9 C 0 I 242 e calJac3.chrUn_GL286409 889942 0 - 1291538 C e papAnu2.chr16 82301 1224 + 74645514 I a score=241656.000000 s hg38.chr17_GL383563v3_alt 153286 128 + 375691 aagttggttgcttgggactaagaaagcagtttcataaagaaaggatttcttggttcccagaccagcccacaaaGAACCCTTGACT-CCAAGGCAGCCGCAGGCTCCCGTGAGGGATCTGCAGCCCACCT s panTro4.chr17 147930 128 + 82630442 aagttggttgcttgggactaagaaagcagtttcataaagaaaggatttcttggttcccagaccagcccacaaaGAACCCTTGACT-CCAAGGCAGCCGCAGGCTCCCGTGAGGGATCTGCAGCCCACCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 43939 128 + 73212453 aaggtggttgcttgggactaagaaagcagtttcataaagaaaggatttcttggttcccagaccagcccacaaagaactcttgact-ccaAGGCAGCCGCAGGCTCCCGTGAGGGATCTTTATCCCACCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107549 128 - 81552678 aagttgcttgcttgggactaagaaagcagtttcataaagaaaagatttcttggctcccagaccagcccacaaaGAACCCTTGACT-CCAAGGCAGCCACAGGCTCCCATGAGGGATCTGCATCCCACCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 73326 128 + 80904711 gagttggttgcttgggactaagaaagcagttttgtgaagaaaggatttcttggttcccaggtcagcccac-aagaacccttgactcccaaggcagcCACAGGCTCCCGGGAGGGATCTGCATCCCAGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74188 128 + 80997621 aagttggttgcttgggactaagaaagcagttttgtgaagaaaggatttctcggttcccaggtcagcccac-aagaacccttgactcccaaggcagcCACAGGCTCCCCGGAGGGATCTGCATCCCAGCT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 74298 128 + 75148670 aagttggttgcttgggactaagaaagcagttttgtgaagaaaggatttcttggttcccaggccagcccac-aagaacccttgactcccaaggcagcCACAGGCTCCCGTGAGGGATCTGCATCCCAGCT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75825267 124 + 122082543 AAGTTAGTCGCTTGGGACCCTGAACGCA-TTTTGCAAAGAAATGCTTTATTGGTT-CTATAGCAGTTTA--GAGGACTCTGGGTT-CAGGAGCAGGCCCTGACATTATAGAAGGGTCTGGATTCCATCT i mm10.chr11 C 0 C 0 e canFam3.chr9 15647579 242 - 61074082 I e calJac3.chrUn_GL286409 889942 0 - 1291538 C e papAnu2.chr16 82301 1224 + 74645514 I a score=487849.000000 s hg38.chr17_GL383563v3_alt 153414 228 + 375691 CAGCTCTGAAGCTGACACTTCCACGATGACGTCGTCTTAATGAATGCC-TTCTAGGAAATGCATTTGGAATCCACCCT-GGGGCTGCAGGGACTGGG--TCTGG----CCCAGTCATGGGGTTCTGGT--GGGGGCTGAGTGTGGGGGCTCAT-CTGCATCAGGTCTGAGAGGGCTTTGGTCCTACAGAGGCGTGGGTAGCGCACCTGCAGCTTAGAACTG------------CGGGCAGAGGCCCGAGCC s panTro4.chr17 148058 228 + 82630442 CAGCTCTGAAGCTGACACTTCCACGATGACGTCGTCTTAATGAATGCC-TTCTAGGAAATGCATTTGGAATCCACCCT-GGGGCTGCAGGGACTGGG--TCTGG----CCCAGTCATGGGGTTCTGGT--GGGGGCTGAGTGTGGGGGCTCAT-CTGCGTCAGGTCTGAGAGGGCTTTGGTCCCACAGAGGCGTGGGTAGCACACCTGCAGTTTAGAACTG------------TGGGCAGAGGCCCGAGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 44067 228 + 73212453 CAGCTCTGAAGCTGACACTTCCACAATGACGTCGTCTTAATGAATGCC-TTCCAGGAAATGCATCTGGAATCCACCCT-GGGGCTGCAGGGACTGGG--TCTGG----CCCAGTCATGGGGTTCTGGT--GGGGGCTGAGTGTGAGGGCTCAT-CTGCATCAGGTCTGAGAGGGCTTTGGTCCCACAGAGGCATGGGGAGTGCACCTGCAGTTTAGAACTT------------CGGGCAGAGGCCCAAGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107677 227 - 81552678 CAGCTCTGAAGCTGACCCTTCCACGAGGACGTCGTCTTAATGAATGCC-TTCTAGGAAATGCATTTGGAATCCACCC--AGGGCTGCAGGCACTGGG--TCTGG----CCCAGTCATGGGGTTCTGGT--GGGGGCTGAGTGTGGGGGCTTAT-CTGCATCAGGTCTGACAGGGCTTTGGTCCCACAGAGGCGTGGGTAGCACACCTGCAGTTTAGAACTG------------CGGGCAGAGGCCCGAGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 73454 229 + 80904711 CGGCTCCGAAGCTGCCCCTTCCACACCGACGTCGTCTTACTGAACGCCTTTCCAGGAAACGCATTTGGAATCCACCCT-GGGAGTGCGGGGACTGGG--TCCGG----CCCAGTCGTGGGGTTCTGGT--GGGGGCTGAGTGTGGGGGCTCAT-CTGCATCAGGTCTGAGGGGGCTTCGGTCCCACAGAGGCGTGGGTAGCGCACTTGCAGTTTAGAACTG------------CGGGCAGAGGCCCGAGCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74316 229 + 80997621 CGGCTCCGAAGCTGCCCCTTCCACACCGACGTCGTCTTACTGAACGCCTTTCCAGGAAACGCATTTGGAATCCACCCT-GGGAGTGCGGGGACTGGG--TCCGG----CCCAGTCGTGGGGCTCTGGT--GGGGGCTGAGTGTGGGGGCTCAT-CTGCATCAGGCCTGAGGGGGCTCCGGTCCCACAGAGGCGTGGGTAGCGCACTTGCAGTTTAGAACTG------------CGGGCAGAGGCCCGAGCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 74426 231 + 75148670 CCGCTCCGAAGCTGCCCCTTCCACACCGACGTCATCTTACTGAATGCCTTTCTAGGAAACGCATTTGGAACCCACCCT-GGGAGTGCGGGGACTGGG--TCCGG----CCCAGTCGTGGGGTTCTGGTGGGGGGGTTGAGTGTGGGGGCTCAT-CTGCATCAGGTCTGAGAGGGCGTCGGTCCCACAGAGGTGTAGGTAGCGCACCTGCGGTTTAGAACTG------------CGGGCAGAGGCCCGAGCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 889942 238 - 1291538 CAGCTCTGAAGCTGACAATTCCAAGATGAAGTCGTCTTGATCAATGCCTCTCTAGGAAATGCATTTGGAAATGACCT--GGGGCTGCAGGGACTGGG--TCTGC----CCTAGGCTCGGGGTTCTGGT---GGGGTTGAGTGTGGGGGCTCGTGTTGCAGCAGGTCTGAGAGGGCTTCGGTCCG--AGAGACGTGGGCAGAGCACCTGCAGTTGAGAGCTGCAGACAGACAGACGGACAGAGACCTGAGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75825391 179 + 122082543 CAACTGT------------------------------------------CTGCAGGGAGCACATTTGTAGTTTGCTTTAGGAGCCACAGGGAGTAGGGTGCTAGGGAACCCAGGCCT-GGGTTCTGGC--GGGGCATGTGTG------------CTGCCACGGGGTTGGGAAGGCTTTGGTCAT-TATAGGCATGGGAAGAAACCCTATATCTTAGGG-TG------------GGGCTGGAGGGAC-AGCC i mm10.chr11 C 0 C 0 e canFam3.chr9 15647579 242 - 61074082 I e papAnu2.chr16 82301 1224 + 74645514 I a score=43984.000000 s hg38.chr17_GL383563v3_alt 153642 17 + 375691 ACTCCCAGGCTGGTGTT s panTro4.chr17 148286 17 + 82630442 ACTCCCAGGCTGGTGTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 44295 17 + 73212453 ACTCCCAGGCTGGTGTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107904 17 - 81552678 ACTCCCAGGCTGGTGTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 73683 17 + 80904711 ACCCCAAGGCTGGTGTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74545 17 + 80997621 ACCCCAAGGCTGGTGTT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 74657 17 + 75148670 ACTGCAAGACTGGTGTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 890180 17 - 1291538 TCTCCCAGGCTGCTGTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75825570 17 + 122082543 AACTACAGGCTGTGGTT i mm10.chr11 C 0 I 4814 s canFam3.chr9 15647821 17 - 61074082 ATTCACAGGCCAGTATC i canFam3.chr9 I 242 C 0 e papAnu2.chr16 82301 1224 + 74645514 I a score=405544.000000 s hg38.chr17_GL383563v3_alt 153659 183 + 375691 CCCAGGTCGGGTGTGGACCTAGGGACTGTGGGGCAGCCCACAGGCTGTCTTTTCTCTGCCAGGCAGGTGTTTA---------CTCACTCATCTGCTATGGCCCTGGG---CTCACTGCCGCC-GC----CCCCCGCCCTGTGGGTTTGTCAGCAGTTTGATGTGTATTTTTCCATAAAAA---TTCATTgttatacatgaaat s panTro4.chr17 148303 182 + 82630442 CCCAGGTCGGGTGTAGACCTAGGGACTGCAGGGCAGCCCACAGGCTGTCTTTTCTCTGCCAAGCAGGTGTTTA---------CTCACTCATCTGCTACGGCCCTGGG---CTCACTGCCGCC-G-----CCCCCGCCCTGTGGGTTTGTCAGCAATTTGATGTGTATTTTTCCATAAAAA---Ttcactgttatacatgaaat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 44312 182 + 73212453 CCCAGGTCGGGTGTGGACCCAGGGACTTCGGGGTAGCCCATAGGCTGTCTTTTCTCTGCCAGGCAGGTGTTTA---------CTCACTCATCTGCTATGGCCTCGGG---CTCACTGCTGCC-G-----CCCCCACCCTATGGGTTTGTCAGCAGTTTGATGTGTATTTTTCCATAAAAA---ttcattgttatacatgaaat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 107921 186 - 81552678 CCCAGGTCGGGCGTGGACCTAGAGACTGCAGGGCAG-CCACAGGCTGTCTTTTCTCTGCCAGGCAGGTGTTTA---------GTCACCCATCTGCTATGGCCTCGGG---CTCACTGCCGCC-CCCTCACCCCCACCCTGTGGGTTTGTCAGCAGTTTGACGTGAATTTTTCCATAAAAA---ttcgttgttatacatgaaat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 73700 185 + 80904711 CCCAGGTCAGGTGTGGACCCAGGGACTGCGGGGCAGCCCACAGGCTGTCTTTTCTCGGCCAGGCAGGTGTTTA---------CGTGCTCATCTGCTATGGCCTTGGGGCTCTCACTGCCCCA-C-----CCCCTGCCCTGTGAGTTTGTCAGCAGTTTGGTGTGTATTTTTCCATAAAAA---TTCACTGCTATAAATGAAAT i rheMac3.chr16 C 0 I 8 s macFas5.chr16 74562 185 + 80997621 CCCAGGTCAGGTGTGGACCCAGGGACTGCGGGGCAGCCCACAGGCTGTCTTTTCTCGGCCAGGCAGGTGTTTA---------CGTGCTCATCTGCTATGGCCTTGGGGCTCTCACTGCCCCA-C-----CCCCTGCCCTGTGAGTTTGTCAGCAGTTTGGTGTGTATTTTTCCATAAAAA---TTCATTGCTATAAATGAAAT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 74674 186 + 75148670 CCCAGGTCGGGTGTGGACCCAGGGACTGCGGGGCAGCCCACACGCTGTCTTTTCTCGGCCAGGCAGGTGTTTA---------CGTGCTCATCTGCTATGGCCTTGGGGCTCTCACTGCCCCACC-----CCCCTGCCCTGTGAGTTTGTCAGCAGTTTGGCGTGTATTTTTCCATAAAAA---CTCATTGTTATAAATGAAAA i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 890197 185 - 1291538 CCCAGGTCGGGTGTGGACACAGGGACTTCTGGGCAGCCCACAAGCTGTCGTTTCTCTGCCAGGCAGGTGTTTA---------CTCACTCATCTGCTATGGCCTCGGGGCTCTCACTGCCCAT-T-----CCCCTGCCTTGTGGGTTCATCAGGAGTTTGATGCTTATTTTTCCATAAAAC---CTAattgttataaatggaat i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15647838 160 - 61074082 -------------TGGA--TAGAGAC----------CTCCCAGGTTGTATATTC---ACCAGGAAGGTCTTCATTGCTCCCTCTCCCTCACCTGCTATGGCCTCAGGATTCTCACTACTACC-C--------------TGTGCAGTTATTTTGAATTTGACATGTTTCTTCTTTTAAAAAGAGTTCAGTGTTAGAAATGCAAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e papAnu2.chr16 82301 1224 + 74645514 I a score=3300.000000 s hg38.chr17_GL383563v3_alt 153842 6 + 375691 atagta--- s panTro4.chr17 148485 6 + 82630442 atagta--- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 44494 6 + 73212453 atagta--- i ponAbe2.chr17 C 0 I 3 s nomLeu3.chr19 108107 6 - 81552678 atagta--- i nomLeu3.chr19 C 0 I 3 s macFas5.chr16 74747 5 + 80997621 -GAGTG--- i macFas5.chr16 C 0 I 3 s chlSab2.chr16 74861 6 + 75148670 AGAGTC--- i chlSab2.chr16 I 1 I 3 s calJac3.chrUn_GL286409 890382 6 - 1291538 atagtc--- i calJac3.chrUn_GL286409 C 0 I 3 s canFam3.chr9 15647998 9 - 61074082 ATGCTATAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e papAnu2.chr16 82301 1224 + 74645514 I e rheMac3.chr16 73885 8 + 80904711 I a score=140696.000000 s hg38.chr17_GL383563v3_alt 153848 71 + 375691 ggttttaaaagggtaactgtcctacaaagtttataacataaagcaggaatcccctgctcac------ctcg------------------------------------------------------------------------------agaca--c s panTro4.chr17 148491 71 + 82630442 ggttttaaaagggtaactgtcctacaaagtttataacgtaaagcaggaatcccctgctcac------ctcg------------------------------------------------------------------------------agaca--c i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 44503 71 + 73212453 tgttttaaaagggtaactgtcctacaaagtttataacgtaaagtaggaatcccctgctcac------ctcg------------------------------------------------------------------------------aaaca--c i ponAbe2.chr17 I 3 C 0 s nomLeu3.chr19 108116 71 - 81552678 tattttaaaagggtaactgtcctacaaagtttataacataaagcaggaatcccctgctcac------ctcg------------------------------------------------------------------------------agaca--c i nomLeu3.chr19 I 3 C 0 s rheMac3.chr16 73893 75 + 80904711 TGTTTTAAAAGGGTAACTGTCCTACAAAGTTTATAACGTAACGCAGGGCTCCCCTGCTCAT------CTGGAGTC--------------------------------------------------------------------------AGTCA--C i rheMac3.chr16 I 8 C 0 s macFas5.chr16 74755 75 + 80997621 TGTTTTAAAAGGGTAACTGTCCTACAAAGTTTATAACGTAACGCAGGGCTCCCCTGCTCAT------CTGGAGTC--------------------------------------------------------------------------AGTCA--C i macFas5.chr16 I 3 C 0 s chlSab2.chr16 74870 75 + 75148670 TGTTCTAAAAGGGGAACTGTCCTACAAAGTTTATAACGTAACGCAGGAATGCCCTGCTCAT------CTCCAGTC--------------------------------------------------------------------------AGTCA--C i chlSab2.chr16 I 3 C 0 s calJac3.chrUn_GL286409 890391 84 - 1291538 tattttaaaagggtaactctcctacaaagtttatatcataaagcaggaatgccctgctcac------cttgagtctgtctc-------------------------------------------------------------------aaggtaacc i calJac3.chrUn_GL286409 I 3 C 0 s canFam3.chr9 15648007 155 - 61074082 GATGAAATAAGGGCAACCGTCCTCCAAAGTTTATAACATAGGGCAGCAACTCCTTCCTCACGTCCCTCTCTAGGCTACCTTCGAATTCCTAACCCCTCTGCTGGTATTCACGTGTGTGGttttttttaaattatttattcattcataagagaca--c i canFam3.chr9 C 0 I 129 e mm10.chr11 75825587 4814 + 122082543 I e papAnu2.chr16 82301 1224 + 74645514 I a score=1011760.000000 s hg38.chr17_GL383563v3_alt 153919 445 + 375691 cttagaactc-ttttagt----tccttggtatctaaaacctcatgcggattctatgtcttgattttgtaattttata-------cagcattatgtactataaaatatcacgatgtag------ctctcacttacgatctccctgagacacatatgcttcTTG------TATATCCTTGTGCACCTCCTCTGTCCTCAT--------CTGGGCTGGCTG-------------GACCAGCCACCCAGctcc-accatcaccctgaggattct-----ctcctgt----gtgagggctccagtttct-----tgtgccc------attttctcttggttttctcccttgtttggttggagcacatcctacagtagctgcctgagaaagagggcaagggaggtgatatttttcaagaactcacatgtctgaacatatcttcattctaacttcacactgcacgaagttctagctggatagaaaagtc-aacttagaaattgtttgccctcagaattc s panTro4.chr17 148562 445 + 82630442 cttagaactc-ttttagt----tccttggtatctaaaacctcatgcggattctatgtcttgattttgtaattttata-------cagcattatgtactataaaacatcacgatgtag------ctctcacttacgatctccctgagacacatatgcttcTTG------TATATCCTTGTGCACCTCCTCTGTCCTCAT--------CTGGGCTGGCTG-------------GACCAGCCACCCAGctcc-accatcaccctgaggattct-----gtcctgt----gtgagggctctagtttct-----tgtgccc------attttctcttggttttctcccttgtttggttggagcacatcctacagtagctgcctgagaaagagggcaagggaggtgatatttttcaagaactcacatgtctgaacatatcttcattctaacttcacacttcactaagttctagctggatagaaaagtc-aacttagaaattgcttgccctcagaattc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 44574 441 + 73212453 cttagaactc-ttttagt----tccctggtatctaaaacctcatgtggattccatgtcttgattttgtaattttata-------gagcattatgtattataaaatat---gatgtag------ctctcatatacgatctccctgacacacatatgcttcTTG------TATATCCTCGTGCACCTCCTCTGTCCTCAT--------CTGGGCTGGCTG-------------GACCAGCCACCCAGctcc-accatcaccctgaggattct-----ctcctgt----gtcagccctccagttttg-----tgtgccc-------ccctctcttggttttctcccttgtttggttggagcacatcctacagtagctgcctgagaaagaaagcaagggaggtgatatttttcaagaactcacatgtctgaacatatcttcattctaccttcacacttcactaagttctagctggatagataagtc-aacttagaaattgtttggcctcagaattc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 108187 445 - 81552678 cttagaactc-ttttagt----tccttggtatctaaaacctcatgcggattctatgtcttgattttgtaattttaca-------gagcattatgtattataaaatatcatgatgtag------ctctcacatacgatctccctgacacacatatgcttcTTG------TATATCCTTGTGCACCTCCTCTGTCCTCAC--------CTGGGCTGGCTG-------------GACCAGCCACCCGGctcc-accatcaccctgaggattct-----ctcctgt----gtcagggctccagtttct-----tgtgccg------attttctcttggttttctcccttgtttggttggagcacatcctacagtagctgcctgagaaagagggcaagggaggtgatatttttcaagaactcacatgtctgaacatatcttcattctaccttcacacttcactaagttctagctggatagaaaagtc-aacttagaaattgtctcccctcagaattc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 73968 431 + 80904711 CTTCGAACGC-CTTTAGT----TCCTCAGTATCTAAAACCTCACGCGGATTCTATGTCTTGATTTTGTAATTTTATA-------GAGCATTATGTATTATAAAATGTCATGATGTAG------CTCTCATATACGATCTGCCTGACACACACATGCTTCTTG------TAGATCCTTGTGCACCTCCTCTGTCCTCAT--------CTGGGCTGGCTGGCACTGGCCTCTAGACCAGCCACCCAGCTC-------CACCCCGAGGATTCT-----Ctcc------------------------------cgtgccc------cgtctctcgtggttttctcccttgtttggctggagcacatcctacagtagctgcctgagaaagagggcaagggaggtgatatttttcaagaactcacatgtctgaacatatcttcattctacctgcacacttcactaagttctagctggatagaaaagtc-aaattagaaattgtttcccgtcagaattc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74830 427 + 80997621 CTTCGAACGC-CTTTAGT----TCCTCAGTATCTAAAACCTCATGCGGATTCTATGTCTTGACTTTGTAATTTTATA-------GAGCATTATGTATTATAAAATGTCATGATGTAG------CTCTCATATACGATCTCCGTGACACACACATGCTTCTTG------TAGATCCTTGTGCACCTCCTCTGTCCTCAT--------CTGGGCTGGCTGGCACTGGCCTCTAGACCAG----CCAGCTC-------CACCCCGAGGATTCT-----Ctcc------------------------------cgtgccc------cgtctctcttggttttctcccttgtttggctggagcacatcctacagtagctgcctgagaaagagggcaagggaggtgatatttttcaagaactcacatgtctgaacatatcttcattctacctgcacacttcactaagttctagctggatagaaaagtc-aaattagaaattgtttcccgtcagaattc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 74945 431 + 75148670 CTTCGAACGC-CTTTAGT----TCCTCAGTATCTAAAACCTCATGCGGATTCTATGTCTTGATTTTGTAATTTTATA-------GAGCATTATGTATTATAAAATGTCATGATGTCG------CTCTCATATTCGAGCTCCCTGACACACACCTGCTTCTTG------TAGATCCTTGTGCACCTCCTCTGTCCTCAT--------CTGGGCTGGCTGGCGCTGGCCTCTAGACCAGCCACCCAGCTC-------CACCCCGAGGATTCT-----Ctcc------------------------------cgtgccc------cgtctctcttcgttttctcccttgtttggttggagcacatcctacagtagctgcctgagaaagagggcgagggaggtgatatttttcaagaacccacatgtctgaacataccttcattctgcctgcacacttcgctaagttctagctggatagaaaagtc-aaattagacattgtttcccgtcagaattc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 890475 456 - 1291538 ctttcaactctttttagt----cccatggcatctaaaatctcatgtggattcca--ccttgattttgtaattttata-------gagcattatgtattATAAAATAT---AACATAG------CTCTCATATGTGATCTCCCAGACACACATGAGCTTCTTG------TATGTccttgtgcacctc--ctgtcctcct--------ctgggctggctggcattggcctctagcccagccacccagctcc-accatcatcttgagcgttct-----ctcctgt----gtcgggctcatttcctgtggaaacgtaccc--------tctcccctggttttctcccttgtttcatggaagcacatcctggagtagctgcctgagaaagagggcaaggggggtgatatttttcaggaactcatgtgtctgaatgtatcttcattctaccttcacacttcactaagttctagctggatagaaaagtctaaattagaaattgtttcccctcagaattc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15648291 492 - 61074082 ctcaggcctc-cTGTGGTATTCACGTTTGTAACTGAAATTTCATGCTGATTCTATTtcttgatttttttagtttatgtatttttcagtattacatattat---atgtcacaatataaaatatcataccatatacaatctctccaaaacacatgtgcttcttatacttttatatccttatatacctcctctgtgctcatgctccagactgggctggctggccttggctgctagcctgg-cacgcagccactgccatcacactggggattctctttcctcctgtcctgtttggatctccagtttcc-----tgtgtccccatatccactttcctagttttctctcttgtttggttggggtacatcctctagtagctgtttgagaaagaatgtatgggaggtaaatttttaaaaaaactcacgt-tctgaaagtatctttattctac-------tatcactgaaatttggctggatacaaatct--agattagaaaccatttcctatcgggacac i canFam3.chr9 I 129 I 494 e mm10.chr11 75825587 4814 + 122082543 I e papAnu2.chr16 82301 1224 + 74645514 I a score=478171.000000 s hg38.chr17_GL383563v3_alt 154364 220 + 375691 agaagctcttgcttctctgtgctcggacttcaaaatttgctttgagaatttcagcgccatttaaattcctgatcctttgtatgtgac----tttttttttctctctttggaaggctttgggatattttctgattatcctggtgtcctgaaatttcataagaatgtttggtgtagttcCTTAAT----TTACTTTAAAATATTTCTGACatataaaaaataaaaatcta s panTro4.chr17 149007 221 + 82630442 agaagctcttgcttctctgtgcttggacttcaaaatttgctttgagaatttcagcgccatttaaattcctgatcctttgtatgtgac---ttttttttttctctctttggaaggctttgggatattttctgattatcctggtgtcctgaaatttcataagaatgtttggtgtagttcCTTAAT----TTACTTTAAAATATTTCTGACATATAAAAAATACAAATCTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 45015 218 + 73212453 agaagatcttgcttctc--tgctcggacttcaaaatttgctttgagaatttcagcgccatttgaattcctgattctttgtatctgac----tttttttttctctctttggaaggctttgggatattttctgattatcctggtgtcctgaaatttcataagaaggtttggtgtagttcCTTAAT----TTACTTTAAAATATTTCTGACATATAAAAAATACAAATCTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 108632 221 - 81552678 agaagatcttgcttctctgtgctcggacttaaaaatttgctttgagaatttcagcaccatttgaattcctgatcctttgtatgtaac---ttttttttttctatctttggaaggctttgggatattttctgattatcctggtgtcctgaaatttcataagaaggtttggtgtagttcCTTAAT----TTACTTTAAAATATTTCTGACATACAAAAAATACAAATCTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 74399 224 + 80904711 agaagatcttgtttcactgcgctctgacttcaaattttgctttgagaatttcagtggcattggaattcctgatcctttgtatgtgactttttttctctctctctctttagaaggctttggaatattttccgattatcctggtgtcctgaaatttcataacaaggtttggtatagctcCTTAAT----TGACTTTAAAATATTTCTGACATATAAAAAATACAAATCTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 75257 224 + 80997621 agaagatcttgtttcactgcgctctgacttcaaattttgctttgagaatttcagtggcattggaattcctgatcctttgtatgtgactttttttctctctctctctttagaaggctttggaatattttccgattatcctggtgtcctgaaatttcataacaaggtttggtatagctcCTTAAT----TGACTTTAAAATATTTCTGACATataaaaaatacaaatcta i macFas5.chr16 C 0 C 0 s chlSab2.chr16 75376 221 + 75148670 agaagatcttgtctcactgtgctctgacgtcaaattttgctttgagaatttcagtggcattggaattcctgatcctttgtatgtgac---ttttctctctctctctttagaaggctttggaatatattccgattatcctgctgtcctgaaatttcataacaaggtttggtatagctcCTTAAT----TTACTTTAAAATATTTCTGACATATAAAaaacacaaatcta i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 890931 226 - 1291538 agaagatcctgcttcattgtgctctggcttcaaaatttgctttgagaatttcagggccatttaaattccagattctttgtgtgtgac--cttttttttcttcttcgttggaaggctttgggatattttccctttatcctggtgtcctgaaatttcttaagaaggtttggtatagttccttaattttcttactTTGAAATATTTCTGACATATAAAAAATACAAATCTA i calJac3.chrUn_GL286409 C 0 I 160 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15648783 494 - 61074082 I e papAnu2.chr16 82301 1224 + 74645514 I a score=294488.000000 s hg38.chr17_GL383563v3_alt 154584 181 + 375691 ggccagacgcggtgggtcacgcctgtaatcccagcactttgggaggctgagacagatggaccacaaggtcagaagttagagaccatcctggccaacacggtgaaaccccgtctctact-aaaatacaaaaaattagctgggcatggtg----gcacatg------------ctcgggaggctgagacaggagaattgc s panTro4.chr17 149228 181 + 82630442 ggccaggcgtggtggctcacgcctgtaatcccagcactttcggaggctgagacaggtggaccacaaggtcagaagttagagaccatcctggccaacatggtgaaaccccgtctctact-aaaatacaaaaaattagctgggcatggtg----gcacatg------------cttgggaggctgagacaggagaattgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 45233 178 + 73212453 ggccgggcgcattggctcatgcctgtaatcccagcactttgggaggctgagacaggtggaccacaaggtcaggagttagagaccatcctggccaacatggtgaa--cccatctctact-aaaatac-aaaaattagccaggcatggtg----gcacatg------------ctccggaggctgacccaggagaattgc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 108853 181 - 81552678 ggccaggtgcggtggctcacgcctgtaatcccagcactttggggggctgagacaggtggatcacaaggtcaggagttagagaccatcctggccaacatggtgaaaccccatctctact-aaaatacaaaaaattagccgggcgtggtg----gcacatg------------ctcgggaggctgagacaggagaattgc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 74623 197 + 80904711 ggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggctgagacaggtggatcacaaggtcaggagttcaagaccatcctggccaacgtggtgaaaccccatctctactaaaaatac-aaaaattagttgggcatggtgttgtgcacctgtaatcccagctacttgggaggctgaggcaggagaatggc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 75481 197 + 80997621 ggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggctgagacaggtggatcacaaggtcaggagttcaagaccatcctggccaacgtggtgaaaccccatctctactaaaaatac-aaaaattagctgggcatggtgttgtgcacctgtaatcccagctacttgggaggctgaggcaggagaatggc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 75597 196 + 75148670 ggccaggcgcagtggctcacgcctgtaatcccagcactttgagaggctgagacaggtggatcacaaggtgaggagttcaagaccatcctggccaacatggtgaaaccccatctctactaaaaatac--aaaattagctgggtgtggtggcgggcgcctgtaatcccagctactcgggaggctgaggcaggagaattgc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15648783 494 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e papAnu2.chr16 82301 1224 + 74645514 I a score=10577.000000 s hg38.chr17_GL383563v3_alt 154765 5 + 375691 ttgaa s panTro4.chr17 149409 5 + 82630442 ttgaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 45411 5 + 73212453 ttgaa i ponAbe2.chr17 C 0 I 118 s nomLeu3.chr19 109034 5 - 81552678 ttgaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 74820 5 + 80904711 ttgaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 75678 5 + 80997621 ttgaa i macFas5.chr16 C 0 C 0 s chlSab2.chr16 75793 5 + 75148670 ttgaa i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15649277 5 - 61074082 ttaat i canFam3.chr9 I 494 C 0 e mm10.chr11 75825587 4814 + 122082543 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e papAnu2.chr16 82301 1224 + 74645514 I a score=1111199.000000 s hg38.chr17_GL383563v3_alt 154770 624 + 375691 cccaggaggc-ggaggttgcagtgacctgagatcgcgccactgcactccagcctgggcgacagagcagg---actccatctcaaaaaaataataataata----------------caaatctataataaacatataaatatacaatatgaag---taaaatataaatattacaaacccatctacctatCACTGAGCTTAA-----TAAAACATTAAGATTCCTCTTTAATTGTATTTCTCCTCTTCCCAAGATGtgtcctgag-tctgttgttttgttatccttcctgtttctgaattctcttgctgcataaaatatattttaatatataacattcttgcatgtttgtgaaatctctatatagatggtgtc-------acgtatttttctgccacctgtctctttgtcagcattattggtgagatacacatactctgagggtggtgactcaatttcaccactgcataatattctattgtttgcata-----tatcacaatttatgtacctattcttctgttga--------aggctttttt----------------------------ggttgcttctaaatttgagctg---------------------taaatattcag----tgcatgtctcctggagcccatgtagatgagtttctggagggAaatggtcctgaggcctcccagcacattggagtcatctggagagcttcacaaatccc s panTro4.chr17 149414 597 + 82630442 cccaggaggt-ggaggttgcagtga--------------------------tctcggcgacagagcagg---actccatctcaaaaaaa-aaaaaaaata----------------caaaTCTATAATAAACATATAAATGTACAATATGAAG---TAAAATATAAATATTACAAACACATCTACCTATCACTGAGCTTAA-----TAAAACATTAAGATTCCTCTTTAATTGTATTTCTCCTCTTCCCAAGATGtgtcctgag-tctgttgttttgttatccttcctgtttctgaattctcttgctgcataaaatatattttaatatataacattcttgcatgtttgtgaaatctctatatagatggtgtc-------aggtatttttctgccacctgtctctttgtcagcattattggtgagatacacatactctgagggtggtgactcaatttcaccactgcataatattctattgtttgcata-----tatcacaatttgtgtacctattcttctgttga--------aggcttttct----------------------------ggttgcttctaaatttgagttg-------------------------tattcagtgcatgcatgtctcctggagcccatgtagatgagtttctggagggAaatggtcctgaggcctcccagcaccttggagtcatctggagagctttacaaatccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 45534 624 + 73212453 cccaggaggcgggagattgcagtgagccaagatcgcgccactgcactccagcctgggtgacagagcaag---actccatctcaaaaaaaaaaaacaaaaa----------------caaaTCTATAATAAACATATAAATATACAATACGAAG---TAAAATATAAATATTACAAACCCATCTACCTATCACTGAGCTTAA-----TAAAACATTAAGATTCCTCTTTAATTGTATTTCTCCTCTTCCCAAGATGTGTCCTGAG-TCTGTTGTTTTGTTATCCTTCCTGTTTCTGAATTCTCTTGCTGCATAAAATATATTTTAATatataatattcttgcatgtttgtgaaatctctatatagatggtgtc-------acgtatttttttgccacctgtctctttgtcagcattattggtgagatacacatactctgagggtggtgactcaatttcaccactgcataatattctattgtttgcata-----tatcacaatttatgtacctattcttctgttga--------aggctttt-t----------------------------ggttgtttctaaatttgagctg---------------------taaatattcag----tgcatgtctcctggagcccatgtagatgagtttctggagggAAATAGTCCTGAGACCTCCCAgcacattggagtcatctggagagctttacaaatccc i ponAbe2.chr17 I 118 C 0 s nomLeu3.chr19 109039 631 - 81552678 cccaggaggc-agaggttgcagtgagccgagatcacgccactgcactctagcctgggcgacagggtgag---actccatctcaaaaaaacaaaaacaacaaca--acaacaaaaacCAAATCtataataaacatacaaatatacaatacgaag---taaaatataaatattacaaacccatctacctatCACTGAGCTTAG-----TAAAACATTAAGATTCC-CTTTAATTGTATTTCTCCTCTTCCCAAGACGtgtcctgag-tctgttgttttgttatccttcctgtttctgaattctcttgctgcataaaatatatttt----tataacattcttgcatgtttgtgaaatctctatatagatggtgtc-------atgtatttttctgccacctgtctctttgtcagcattattggtgagatacacacactgtgagtgtggtgactcaatttcagcactgcataatattctattgtttgtata-----tgtcacaatttatgtacctattcttctgctga--------agcctttt-t----------------------------ggttgtttctaaatttgagctg---------------------taaatattctg----tgcatgtctcctggagcccacg-agatgagtttctggagggAAATGGTCCAGGGGCCTCCCAgcacattggagtcatctggagagctttacaaatccc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 74825 626 + 80904711 cccacgaggc-ggaggttgcagtgagcagagatcgcgccactgcactccagcctgggtgacagagcaagactactccatctcaaaaaaaaacaaaaaaaaaaa--CCA--------CAAATCTATAATAAACATATAAATACACAATATGAAG---TAAAATATAAATATTACAAACCTGTCTACCTATCACTGAGCTTAA-----TAAAACATTAAGATTCCTCTTTAATTGTATTTCTCCTCTCCCCAAGACGTGTCCCGAG-TCTG------TGTTATCCTTCCTGGTTCTGAATTCGCTTGCTGTGTAAAATATTTTTTaatatataacgttcttgcatgtttgtgaaatctctacttagatggtgcc-------atgtatttttctgccgcctgcctgcctgtcagcattattggtgagatgcacatactctgagagtggtgactcagtttcaccactgcataatattctattgtttgcata-----tatcacaatttacgtgtctgttcctctgttga--------aggctttt-t----------------------------ggttgtttctgaatctgaactg---------------------caaatattccg----tgcatgtctcctggagcccatgtagacgagtttctggagggcaacggtcctgaggcctcccagcacgttggagtcctatggagagctttataaatccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 75683 623 + 80997621 cccaggaggc-ggaggttgcagtgagcagagatcacaccactgcactccagcctgggtgtcagagcaagactactccatctcaaaaaaaaaaaaaaaaaaaaa----a--------caaatctataataaacatataaatacacaatatgaag---taaaaaataaatattacaaaCCTGTCTACCTATCACTGAGCTTAA-----TAAAACATTAAGATTCCTCTTTAATTGTATTTCTCCTCTCCCCAAGACGTGTCCCGAG-TCTG------TGTTATCC-TCCTGGTTCTGAATTCGCTTGCTGTGTAAAATATATTTTaatatataacgttcttgcatgtttgtgaaatctctacatagatggtgtc-------atgtatttttctgccacctgcctgcctgtcagcattattggtgagatgcacatactctgagagtggtgactcagtttcaccactgcataatattctattgtttgcata-----tatcacaatttacgtgtctgttcctctgttga--------aggctttt-t----------------------------ggttgtttctgaatctgaactg---------------------caaatattccg----tgcatgtctcctggagcccatgtagacgagtttctggagggcaacggtcctgaggcctcccagcacgttggagtcctctggagagctttataaatccc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 75798 621 + 75148670 cccaggtggc-agaggctgcagtgagccaagatcgcatcactgcactccagcctgggtgacagagcgag---actccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaa--------aaaatctataataaacatataaatatacaatatgaag---taaaatataaatatTACAAACCCGTCTACCTATCACTGAGCTTAA-----TAAAACATTAAGATTCCTCTTTAATTGTATTTCTCCTCTCCCCAAGACGTGTCCCGAG-TCTG------TGTTATCCTTCCTGGCTCTGAATTCACTTGCTGTGTAAAATACATTTTaatatataacgttcttgcatgtttgtgaaatctctacatagatggtgtc-------gtgtatttttctgcca----cctgcctgtcagcattattggtgagatgcacatactctgagagtggtgattcagtttcaccactgcataatattctattgtttgcata-----tatcacaatttacgcatctattcctctgttga--------aggctttt-g----------------------------ggttgtttctgaatctgaactg---------------------taaatattccg----tgcatgtctcctggagcccacgtagacgagtttctggagggcaacggtcctgaggcctcccagcaggttggagtcctctggagagctttctaaatccc i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15649282 661 - 61074082 cccagaatcc-tgaaacttca-tgataagaagtcttgctatagttcCTTAAATTGTTTAATATTGAAAG---ATTT----------------------------------------CAGACCTATAAAAATAATGCATATGTAATA-ATGAAGTATTATAATATAAATATTGCAAAACCATCTATCCATCATTGACATTAAAACATTAACACGTTGAAACCCCCCCTTAGCTG---GCCCTGTCTTCTCAAGACATGCcttgagatctgttgt----ttatccttcctgtgcatttattctttcgctgcataaaatatatgttaatatatgtcatttctccctgttt-tagaatctatatatagatggtgtcataaagtatgtatttttctgccatctgtttcttagct--catggttg--tagagtcatctacgctgagaatacccactcatttccacca--gcatgatattccattgtttgactacactgtatcaccacttatgcatctattcttctgttgatgctatgtaggttgtt-ttctttctttctttttttttttttttgtaggttgttttcaatttttagctaataaaaaggtactgctctaaattaacactctg----tccacatctcctggagcccacttagaggagcttctgtaTGAAaatggttctcagtttcactagcacattggagtcatgtatggaggttcacagaatcc i canFam3.chr9 C 0 I 1089 e mm10.chr11 75825587 4814 + 122082543 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e papAnu2.chr16 82301 1224 + 74645514 I a score=218694.000000 s hg38.chr17_GL383563v3_alt 155394 128 + 375691 gatgccagccaaggatacatccaaaatcgattaaaccaaaatctctagtggtgggtctgccaggagtacttttaaagctccccaggtgattccagtgagcagccaaggggaacaaccactgCCCTAGA s panTro4.chr17 150011 116 + 82630442 gatgccagccaaggataca------------taaaccaaaatctctagtggtgggtctgccaggagtacttttaaagctccccgggtgattccagtgagcagccaaggggaacaaccactgCCCTAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 46158 128 + 73212453 gatgccagccaaggatacatgcaaaatcgattcaaccaaaatctctagtggtgggtctgccaggagtacttttaaagctccccaggtgattccagtgagcagccaaggggaacaaccactgTCCCAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 109670 128 - 81552678 gatgccagccaaggatacatgcaaaatcgattaaaccaaaatctctagtggtgggtctgccatgagtacttttaaagctccccaggtgattccagtgagcagccaaagggaacaaccactgCCCTAGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 75451 128 + 80904711 agtgccagccaaggatacattcaaaatcaattaaacccaaatctctagtggtgggtctgccatgagtacttttaaagctccccaggtgattccagtgagcagccaaggggaaccacCACTGCCCTGGA i rheMac3.chr16 C 0 I 304 s macFas5.chr16 76306 128 + 80997621 agtgccagccaaggatacattcaaaatcaattaaacccaaatctctagcggtgggtatgccatgagtacttttaaagctccccaggtgattccagtgagcagccaaggggaaccaccactgCCCTGGA i macFas5.chr16 C 0 I 229 s chlSab2.chr16 76419 128 + 75148670 agcgccagccaaggatccgttcaaaatcaattaaacccaaatctctagtggtgggtctgccatgagtactttcaaagctccccaggtgattccagcgagcagccaaggggaaccaccactgCCCTGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e papAnu2.chr16 82301 1224 + 74645514 I a score=8148.000000 s hg38.chr17_GL383563v3_alt 155522 3 + 375691 CCA s panTro4.chr17 150127 3 + 82630442 Cca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 46286 3 + 73212453 CCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 109798 3 - 81552678 CCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 75883 3 + 80904711 CCA i rheMac3.chr16 I 304 C 0 s macFas5.chr16 76663 3 + 80997621 CCA i macFas5.chr16 I 229 C 0 s papAnu2.chr16 83525 3 + 74645514 CCA i papAnu2.chr16 I 1224 C 0 s chlSab2.chr16 76547 3 + 75148670 CCA i chlSab2.chr16 C 0 I 572 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I a score=2611.000000 s hg38.chr17_GL383563v3_alt 155525 2 + 375691 At s panTro4.chr17 150130 2 + 82630442 at i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 46289 2 + 73212453 At i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 109801 2 - 81552678 At i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 75886 2 + 80904711 Gt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 76666 2 + 80997621 Gt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 83528 2 + 74645514 AT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e chlSab2.chr16 76550 572 + 75148670 I a score=215469.000000 s hg38.chr17_GL383563v3_alt 155527 91 + 375691 gctactcaaggagtgtcccttcaaccatgtgtcacctgccagcatgttagatgtgcacactggggtcccgccccagagctggcgagtgagc s panTro4.chr17 150132 91 + 82630442 gctactcaaggagtggcccttcaaccatgtgtcacctgccggcatgttagatgtgcacactggggtcccgccccagagctggcgagtgagC i panTro4.chr17 C 0 I 37 s ponAbe2.chr17 46291 91 + 73212453 gctactcaaggagtggcccttcaaccatgtgtcacctgccagtgcgttagatgtgcacactggggtcccgccccagagctggcgagtgagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 109803 88 - 81552678 gctactcaaggtg---cccttcaaccatgtgtcacctgccagcgtgttagatgtgcacgctggggtcccaccccagagctggcgagtgagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 75888 91 + 80904711 gctactcaaagtgtggcccttcaaccatgtgtcacctgcaagcctgttagatgtgcacacttgggtcccaccccagagctggcgagtgagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 76668 91 + 80997621 gctactcaaggtgtggcccttcaaccatgtgtcacctgcaagcctgttagatgtgcacacttgggtcccaccccagagctggcgagtgagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 83530 91 + 74645514 GCTACTCAAGGTGTGGCCCTTCAACCATGTGTCACCTGCAAGCCTGTTAGATGTGCACACTCAGGTCCCACCCCAGAGCTGGCGAGTGAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 77122 91 + 75148670 gctactcaaggtgtggcccttcaaccatgtgtcacctgcaagcctgttagatgtacacacttgggtcccaccccagagctggcgagcgagc i chlSab2.chr16 I 572 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I a score=513016.000000 s hg38.chr17_GL383563v3_alt 155618 321 + 375691 atgtgtgtttcaggaggacctcaggGATGGCTGCAGGCAGCGCCCACCTTCGTCTACTGGGCATCACCAAACTGCTGCTCGGGATGGTGG-AGGGGCCACACGGGTGTGGAGGCTTCACGTCCCTCTGCCGGTCACTTACAGGctttctctatggaagcccattctcttcagtcctgggaaatattcttgtgtcatttcttcaacaatctcctctcctctgttttctgtttcttgggttgaaattcctatttgatggaggctggatcttctgtgttgagctgatcttgttgttgttcaatgttcttgactttttcctc-tttt s ponAbe2.chr17 46382 321 + 73212453 atgtgtgtttcaggaggacctcaggGATGGATGCAGTCCGCGCCCACCTTCGCCTACTGGGCATCACCAAACTGCTGCTCAGGATGGTGGCGGGGGCCACACCAGTGTGGAGGCTTCACATCCCtgtgctgggaacttacaggctttctctatggaagcccattcccttcagtcctgggaaatattcttgtgtcatttcttcaacaatctcctctcctctgttttctgtttctcgggttgaaattcctatttgatggaggctggatcttctgtgttgagctgatcttgttgttgttca-tgttcttgactttttcctc-tttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 109891 320 - 81552678 atctgtgtttcaggaggacctcaggGATGGCTGCAGGCTGCGCCCACCTTCGCCTACTGGGCATCACCAAACTGCTGCTCAGGGTGGTGGCAGGGGCCACACGGGTGTGGAGGCTTCACGTCCCtgtgccgggaacttacaggctttctctatggaagcccattcccttcagtcctggggaatattcttgtgtcatttcttcaacaatctcctctcctctgttttctgtttcacgggttgaaattcctatttcacggaggctggatcttctgtgttgagctgatc---ttgttgtccaatgttcttgacttcttcctcttttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 75979 313 + 80904711 atctgtgtttcagcaagacctcaggGACGGCTGCAGGCTGCGCCCACCTGCGCCTACTGGGCATCACCAAACTGCTGCTCGGGATGGTGGCCGGGGCCACACCGGTACGGAGGCCTCGTGTCCCtgtgctgagcacttgtagg-gttctctgtggacgcccattcccttcagtcctgggaagtattc-tgtgtcgtttcttcaaccatctcctctcctctgttttctgtttctcaggatgaaattcctgtttga-------tggatcttctgtgttgagctggtcttgttgttttccagtattcttgacttttccctc-tttt i rheMac3.chr16 C 0 I 8 s macFas5.chr16 76759 312 + 80997621 atctgtgtttcagcaagacctcaggGACGGCTGCAGGCTGCGCCCACCTTCGCCTACTGGGCATCACCAAACTGCTGCTCGGGATGGTGGCCGGGGCCACACCGGTACGGAGGCCtcgt-tccctgtgctgagcacttgtagg-gttctctgtggacgcccattcccttcagtcctgggaagtattc-tgtgtcgtttcttcaaccatctcctctcctctgttttctgtttctcaggatgaaattcctgtttga-------tggatcttctgtgttgagctggtcttgttgttttccagtattcttgacttttccctc-tttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 83621 313 + 74645514 ATCTGTGTTTCAGCAAGACCTCAGGGACGGCTGCAGGCTGCGCCCACCTTCGCCTACTGGGCATCACCAAACTGCTGCTCGGGATGGTGGCCGGGGCCACATGGGTACAGAGGCCTCGTGTCCCTGTGCTGAGCACTTGCAGG-GTTCTCTGTGGCAGCCCATTCCCTTCAGTCCTGGGAAGTATTC-TGTGTCATTTCTTCaaccttctcctctcctctgtgtTCTGTTTCTCGGGTTGAAATTCCTGTTTGA-------TGGATCTCCTGTGTTGAGCTGGCCTTGTTGTTTTCCAGTATTCTTGACTTTTCCCTC-TTTT i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 77213 313 + 75148670 atctgtgtttcagcaagacctcaggGACGGCTGCAGGCTGCGCCCACCTTCGCCTGCTGGGCATCACCAAACTGCTGCTCGGGATGGTGGCCGGGGCCACACCGGTACGGAGGCCTCGTGTCCCtgtgctgagcacttgcagg-gttctctgtggaagcccattcccttcagtcctgggaagtattc-tgtgtcatttcttcaaccatctcctctcctctgttttctgtttctcaggttgaaattcctgtttga-------tggctcttctatgttgagctggtcttcttgttttccagtattcttgacttttccctc-tttt i chlSab2.chr16 C 0 I 1 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e panTro4.chr17 150223 37 + 82630442 I a score=11911.000000 s hg38.chr17_GL383563v3_alt 155939 16 + 375691 gcttttatgcatttta s ponAbe2.chr17 46703 16 + 73212453 gcttctatgcatttta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110211 16 - 81552678 gcttttatgcatttta i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 77071 8 + 80997621 -------tgcgttcc- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 83935 16 + 74645514 GCGTTTATGCATTTTA i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 77527 16 + 75148670 gcgtttatgcatttta i chlSab2.chr16 I 1 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e rheMac3.chr16 76292 8 + 80904711 I e panTro4.chr17 150223 37 + 82630442 I a score=141820.000000 s hg38.chr17_GL383563v3_alt 155955 85 + 375691 ctttctgggagattttctctcctcttccatcccttctcatgcattttaaattcctgctattatatttttaatgttcaagaacttc s ponAbe2.chr17 46719 85 + 73212453 ctttctgggagattttctctcctcttccatcccttctcatgcattttaaattcctgccattatatttttaatgttcaagaacttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110227 80 - 81552678 cttaatgggagattttctctcctcttccatcccttctcatgcattttaaattcctgc-----tatttttaatgttcaagaacttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 76300 84 + 80904711 ctctctcggaga-tttctctcctcttccatcccttctcatgcattttaaattcctgctattatatttttaatgttcaagaatttt i rheMac3.chr16 I 8 C 0 s macFas5.chr16 77079 84 + 80997621 ctctctcggaga-tttctctcctcttccatcccttctcatgcattttaaattcctgctattatatttttaatgttcaagaatttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 83951 82 + 74645514 --CTCTCGGAGA-TTTCCCTCCTCTTCCATCCCTTCTCATGCATTTTAAATTCctgctattatatttttaatgttcaagAATTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 77543 82 + 75148670 --ctctcggaga-tttctctcctcttccatcccttctcatgcattttaaattcctgctattatatttttaatgttcaagaatttt i chlSab2.chr16 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e panTro4.chr17 150223 37 + 82630442 I a score=29288.000000 s hg38.chr17_GL383563v3_alt 156040 11 + 375691 aacactgcctt s panTro4.chr17 150260 11 + 82630442 AACACTGCCTT i panTro4.chr17 I 37 C 0 s ponAbe2.chr17 46804 11 + 73212453 aacactgcctt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110307 11 - 81552678 aacactgcctt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 76384 11 + 80904711 aacactgcctt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77163 11 + 80997621 aacactgcctt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84033 11 + 74645514 Aacactgcctt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 77625 11 + 75148670 aacactgcctt i chlSab2.chr16 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15649943 1089 - 61074082 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I a score=289630.000000 s hg38.chr17_GL383563v3_alt 156051 114 + 375691 t-aaaaaaataaaattcttttctcatttcataggtgtaatacttcAGGGGATTTTCCT----ctccttttttctgtgtactggagtctc--tattttcagttattggatttcatcaaacgt s panTro4.chr17 150271 112 + 82630442 T-AAAAAAT--AAATTCTTTTCTCATTTCATAGGTGTAATACTTCAGGGGATTTTCCT----ctccttttttctgtgtactggagtctc--tattttcagttattggatttcatcaaacgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 46815 118 + 73212453 t-aaaaaaataacattcttttctcatttcacaggtctaatacttcaggggattttcct--gattctttttttctgtgtactggagtctctgtattttcaggtattggatttcatcaaacgt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110318 114 - 81552678 t-aaaaaaataacattcttttctcatttcataggtgtaatacttcaggggattttcct----ctccttttttctgtgtactggagtctc--tattttcatttattggatttcatcaaacgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 76395 121 + 80904711 taaaaaaaataacattctgttctcatttaataggtgcactacttcagggcattttcctctgactccttttttctgtgcactggagtctctgtattttcagttactggatttcatcagacgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77174 121 + 80997621 taaaaaaaataacattcttttctcatttaataggtgcactacttcagggcattttcctctgactccttttttctgtgtactggagtctctgtattttcagttactggatttcatcagacgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84044 120 + 74645514 t-aaaaaaataacattcttttctcatttaataggTGCACTCCTTCAGGGGATTTTCCTCTGACTCCTTTTTTCTGTGTACTGGAGTCTCTGTATTTTCAGCTATTGGATTTCATCAGACGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 77636 120 + 75148670 t-aaaaaaataacattcttttctcatttaataggtgcaatacttcAGGGGATTTTCCTCTGACTCCTTTTTTCTGTGTACTGGAGTCTCTGTATTTTCAGTTATTGGATTTCATCAGACGT i chlSab2.chr16 C 0 I 169 s canFam3.chr9 15651032 120 - 61074082 t-aactaaataaCATTCTTTTCCTGTTTCATGGGTAGGTGTCTTCAGAGGGTTGTTCCCTAActccttcttcctgtttattagaatctctgtatttttagttgttggttttggtcaactgt i canFam3.chr9 I 1089 C 0 e mm10.chr11 75825587 4814 + 122082543 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I a score=41826.000000 s hg38.chr17_GL383563v3_alt 156165 19 + 375691 tgggtgcccttggctgtcc s panTro4.chr17 150383 19 + 82630442 tgggtgcccttggctgtcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 46933 19 + 73212453 tgggtgcccttggctgtcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110432 19 - 81552678 tgggtgcccttggctgtcc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 76516 19 + 80904711 cagatgcccttggctgtcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77295 19 + 80997621 cagatgcccttggctgtcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84164 19 + 74645514 CGGATGCCCTTGGCTGTCC i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15651152 18 - 61074082 -tggtgcctttggctgttt i canFam3.chr9 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I e chlSab2.chr16 77756 169 + 75148670 I a score=586820.000000 s hg38.chr17_GL383563v3_alt 156184 235 + 375691 ccactctgagtgaaacacagcaaagctaataggcagcactgaacatgtgggtgaggcttgtggactggaggtctcacagtg---gactgggcagagacccactgtttggggaacccccagtgtcaggatc--tgtccatctgttctctttgatcagtttcccagagagaaattcaataatgtcctgccagccaggtgcagaggctcatgcctgtaatcccagcactgtgggaggctgagg s panTro4.chr17 150402 216 + 82630442 ccattatgagtgaaacacagcaaagctaataggcagcactgaacatgtgggtgaggcttgtggactgg----------------------gcagagacccactgtttggggaacccccagtgtcaggatc--tgtccatctgttctctttgatcagtttcccagagagaaattcaataatgtcctgccagccaggtgcagaggctcatgcctgtaatcccagcactgtgggaggctgagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 46952 235 + 73212453 ccactatgagtgaaacacagcaaagctaataggcagcactgaacatgtgggtgaggcttgtggactggaggtctcacagtg---gactgggcagagacccactgtttggggaacccccagtgtcaggatc--tgtccatctgttctctttgatcagtttcccagagagaaattcaataatgtcctgccagccaggtgcagaggctcatgcctgtaatcccagcactttgggaggctgagg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110451 235 - 81552678 ccgctatgagtgaaacacagcaaagctaataggcagcactgagcatgtgggtgaggcttgtggactggaggtctcacagtg---gactgggcagagacccactgtttggggaacccccagtgtcaggatc--tgtccatctattctctttgatcagtttcccagagagaaattcaataacgttctgccAgccaggtgcagaggctcatgcctgtaatcccagcactttgggaggctgagg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 76535 235 + 80904711 ccactatgagtgaaacacagcaaagctactaggcagcactgaacatgtgggtgaggcttgtggaccggaggtctcacagtg---gactgggcagagacccactgtttggggaacccccagtgtcaggact--tgtccatctgttctctttgatcagtttcccagacagaaattcaataatgtcctgccagctgggagctgaggctcacgcctgtaatcccagcactttgggaggccgagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77314 235 + 80997621 ccactatgagtgaaacacagcaaagctactaggcagcactgaacatgtgggtgaggcttgtggaccggaggtctcacagtg---gactgggcagagacccactgtttggggaacccccagtgtcaggact--tgtccatctgttctctttgatcagtttcccagacagaaattcaataatgtcctgccagctgggagctgaggctcacgcctgtaatcccagcactttgggaggccgagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84183 233 + 74645514 CCACTATGAGTGAAACACAGCAAAGCTACTAGGCAGCACTGAAC-TGTGGGTGAGGCTTGTGGACCGGAGGTCTCACAGTG---GACTGGGCAGAGACCCACTGTTTGGGGAACCCCCAGTGTCAGGACT--TGTCCATCTGTTCTCTTTGATCAGTTTCCCAGACAGAAATTCAATAATGTCCT-CCAGCCGGGCGCTgaggctgacgcctgtaatcccagcactttgggaggctgagg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 77925 235 + 75148670 CCACtataagtgaaacacagcaaagctactaggcagcactgaacatgtgggtgaggcttgtagaccggaggtctcacagtg---gactgggcagagacccactgtttggggaacccccagtgtgaggact--tgtccatctgttctctttgatcagtttcccagagagaaattcaataatgtcctgccagccgggagctgaggctcacgcctgtaatcccagcactttgggaggctgagg i chlSab2.chr16 I 169 C 0 s canFam3.chr9 15651170 166 - 61074082 -caat-tgagtgtaacacagccaagctac-aagctaaattgtacgtgcaggtggggcttgcggaaaggaggccttgcagggggtgactgggcagagaa--------gggggagttgctgacagcaggatctatgtccatcttttctctttagtcagttctccag---------------------------------------------------------------tgatgggctgagt i canFam3.chr9 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e calJac3.chrUn_GL286409 891157 160 - 1291538 I a score=538267.000000 s hg38.chr17_GL383563v3_alt 156419 244 + 375691 cgggtggatcacaaggtcaggagttcaagaccggcctgaccaacatggagaaaccccatctctactaaaaatacagaattagctgggcgtggtggcatatgcctataatcccagctactcacttgaggctgaggcaggagaatcacttgcacctgggaggcggaggttgcggtgagccgagatcataccattgcacttcagcctgggtgacaagagcgaaactccgtctcaa------aataataataat s panTro4.chr17 150618 244 + 82630442 cgggtggatcacaaggtcaggagttcaagaccggcctgaccaacatggagaaaccccatctctactaaaaatacagaattagctgggcgtggtggcatatgcctgtaatcccagctactcacttgaggctgaggcaggagaatcacttgcacccgggaggcggaggttgcggtgagctgagatcataccattgcacttcagcctgggtgacaagagcgaaactccgtctcaa------aataataataat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 47187 243 + 73212453 caggtggatcccaaggtcaggagttcgagactggcctgaccaacatggagaaaccccatctctactaaaaatacagaattagccaggtgtggtggcatgtgcctgtaatcccagctactcacttgaagctgaggcaggagaatctcttgaacccgggaggcggaggttgcggtg-gccgagatcatgccattgcacttcagcctgggtgacaagagcaaaactctgtctcaa------aataataataat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110686 250 - 81552678 cgggtggatcacaaggtcaggagtttgagactggcctgatcaacatggagaaaccccatctctactaaaaatacagaattagctgggcgtggtggcgcgtgcctgtaatcccagctactcgcttgaggctgaggcaggagaatcacttgaacttgggaggcggaggttgcagtgagccgagatcatgccattgcactccagccagggcgacaagagcgaaactccatctcaaaataataataataataat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 76770 236 + 80904711 cgggcggatcacaaggtcaggagttcgagaccggcctgaccaacatggagaaaccccatctctactaaaaatacaaaattagccgggcgtggtggcgcatgcctgtaatcccagctactca--ggaggctgaggcaggggaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaacaagagtgaaactccgtctgaa------------aataat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77549 236 + 80997621 cgggcggatcacaaggtcaggagttcgagaccggcctgaccaacatggagaaaccccatctctactaaaaatacaaaattagccgggcggggtggctcctgcctgtaatcccagctactcg--ggaggctgaggcaggggaatcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaacaagagcgaaactccgtctcaa------------aataat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84416 236 + 74645514 caggtggatcacaaggtcaggagttcgagaccggcctgaccaacatggagaaactccatctctagtaaaaatacaaaattagccgggcgtggtggcacatgcctgtaatcccagctactcg--ggaggctgaggcaggggaatcgctcgaacccgggaggcggaggttgcagtgagccaagatcgtgccattgcactgcagcctgggcgacaagagcgaaactctgtctcaa------------aataat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 78160 236 + 75148670 caggtggatcacaaggtgaggagttcgagactggcctgaccaacacggagaaaccccatctctactaaaaacacaaaattagccaggcatggtggcacatgcctgtaatcccagctactcg--ggaggctgaggcaggggaattgcttgaacccgggaggcggaggttgcagtgagccaagatcgtgccattgcactccagcctgggcgacaagagcgaaactctgtctcaa------------aataat i chlSab2.chr16 C 0 C 0 e mm10.chr11 75825587 4814 + 122082543 I e canFam3.chr9 15651336 0 - 61074082 C e calJac3.chrUn_GL286409 891157 160 - 1291538 I a score=3276.000000 s hg38.chr17_GL383563v3_alt 156663 1 + 375691 a s panTro4.chr17 150862 1 + 82630442 a i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 47430 1 + 73212453 a i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110936 1 - 81552678 a i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 77006 1 + 80904711 a i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77785 1 + 80997621 a i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84652 1 + 74645514 a i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 78396 1 + 75148670 a i chlSab2.chr16 C 0 C 0 s mm10.chr11 75830401 1 + 122082543 A i mm10.chr11 I 4814 C 0 e canFam3.chr9 15651336 0 - 61074082 C e calJac3.chrUn_GL286409 891157 160 - 1291538 I a score=243400.000000 s hg38.chr17_GL383563v3_alt 156664 70 + 375691 aatgtcctgccttgggggtggatggatggggactaggcctggcttttatcagcctccatcagggatttta s panTro4.chr17 150863 70 + 82630442 aatgtcctgccttgggggtggatggatggggactaggcctggcttttatcagcctccatcagggatttta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 47431 70 + 73212453 aatgtcctgccttgggggtggatggatggggactaggcctggcttttatcagcctccatcaggaatttta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 110937 70 - 81552678 aaTGTCCTGCCTTGGGGGTGGATGGATGGGGACGAGGCCTGGCTTTTATCAGCCTCCATCAGGGATTTTA i nomLeu3.chr19 C 0 M 224 s rheMac3.chr16 77007 70 + 80904711 aatgtcctgccttgggggtggacggatggggactaggcctggcttttatcagcctccatcatggatttta i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77786 70 + 80997621 aatgtcctgccttgggggtggacggatggggactaggcctggcttttatcagcctccatcatggatttta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84653 70 + 74645514 aatgtcctGCCTTGGGGGTGGATGGATGGGGACTAGGCCTGGCTTTTATCAGCCTCCATCACGGATTTTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 78397 70 + 75148670 aatgtcctgccttgggggtggatggatggggactaggcctggcttttatcagcctccatcacggatttta i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 891317 70 - 1291538 aatgtcctgccttgagggtggacggatggggaccaggcctagcttttatcagtccctttcagggatttta i calJac3.chrUn_GL286409 I 160 C 0 s mm10.chr11 75830402 57 + 122082543 AGTGTCTTGCTTTGGGTGAGCGAGGGTAACAAGTAGGCCTGGCT-------------GTCAGGGCTGTTT i mm10.chr11 C 0 C 0 s canFam3.chr9 15651336 52 - 61074082 aacatcttgcctggggggtgggtagatggagaata-gccaggtgttgg------------agggg----- i canFam3.chr9 C 0 C 0 a score=36684.000000 s hg38.chr17_GL383563v3_alt 156734 22 + 375691 aaggggaatgagggcgtcccca s panTro4.chr17 150933 22 + 82630442 aaggggaatgagggcgtcccca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 47501 22 + 73212453 aaggggtatgagggcttcccca i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 77077 22 + 80904711 atggggaattagggcttctcca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77856 22 + 80997621 atggggaattagggcttctcca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84723 22 + 74645514 GTGGGGAATTAGGGCTTCTCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 78467 22 + 75148670 atggggaattagggcttctcca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 891387 11 - 1291538 -------atgag----tcccca i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75830459 8 + 122082543 --------------TCTGGCCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15651388 22 - 61074082 gagaggatggagggtctctcca i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 111007 224 - 81552678 M a score=3362120.000000 s hg38.chr17_GL383563v3_alt 156756 1080 + 375691 tttacatcctgatttcaggaaggcaccttgccccagcctttggctacccttggggtccccaatccagaatcttttcagatcaccattggccggcag-taaacctgtctcctgccatggtcagagaagggcagtcaccaggcc--------------------------------------------gggagaggggacc-------------------------------tgagggt---------------------gtaaacac-------------------------------------ttctttcaatcaagacaa---------ttctcagacccaccctgaacttccacctttgggacacctggcccctccaagttctgtgcatttgggggattctgcaaagcaaatgggcttgttcatgc------------ttggcttccttctttgtagacattttgag-----------gctgacactaagcaaatcatactgttccagcttccaaagctcttcagatatttgtcattcactgccatcttctctcctgttctttttgtctttgtgctttatgccattttcattcctttacgtcattctagtggggttttgagggacagaggaaaatatgaatatattcagtgcaccatatataaccagaagtcCTTGTGCATTTAAAAGACATTTTTGCATACATACGTATGTGTTTGCAGAACTCATTCTGATTATTTGTGT------GTACTT----TTGTATGTAGATGGCCTTGCTTATCCGTTCAGCATCAGGTGTGTGAGCTGCATGAACACACACAGATCTAGCC-C-CTCCTTTCACTGCGGCTTAGGAAGGGTTCCAGCAAGTCAACGCACCACAGTTTTT----TCCA---TTTTTCCATGGACGCATCTCAGAAACACAGGCAATCGTGGTC-TTCGATCAACACACTGGCTCGGTGC--AAATTTTAATCTTCATTGTTTTAATTCTGAAGCATAACGTGCCACAGGGAAA--GTGAGTTTCTTTACTGTTTGCCAGCAGCAA-G-GACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCCCAGCTTGGAGAG---AAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGG-GCAGGAGGCAGGAAGGATGGGAGGGTGTGAACAC-CGACACA----------------------------CACACACAC------------------------------------------GTTCTC--TCTCTTCAG------GGAAG-GGTTTTCCAGAAGCATTTG------CCCATACTCTGAATGAAGTA-TTTTCATGCCAAGCCAAACCTCC s panTro4.chr17 150955 1084 + 82630442 tttacatcctgatttcaggaaggcaccttgccccagcctttggctacccttggggtccccaatccagaatcttttcagatcaccactggccggcag-taaacctgtctcctgccatggtcagagaagggcagtcaccaggcc--------------------------------------------aggagaggggact-------------------------------tgagggt---------------------gtaaaccc-------------------------------------ttctttcaatcaagacaa---------ttctcagacccaccctgaacttccaccttcgggacacctggcccctccaagttctgtgcatttgggggattctgcagagcaaatgggcttgttcatgc------------ttggcttccttctttgtagacattttgag-----------gctgacactaagcaaatcatactgttccagcttccaaagctcttcaggtatttgtcattcactgccatcttctctcctgttctttttgtctttgtggtttatgccattttcattcctttatgtcattctagtggggttttgagggacagaggaaaatatgaatatattcagtgcaccacatgtaaccagaagtcCTTGTGCATTTAAAAGACATTTTTGCATACGTACGTATGTGTTTGCAGAACTCATTCTGATTATTTGTGT------GTACTTCCTTTTGTACGTAGATGGCCTTGCTTATCCGTTCAGCATCAGGCGTGTGAGCTGCATGAACACACACAGATCTAGCC-C-CTCCTTTCACTGCGGCTTAGGAAGGCTTCCAGCAAGTCAACGCACCA--GTTTTT----TCCA---TTTTTCCACGGACGCATCTCAGAAACACAGGCAATCGTGGTC-TTCGCTCAACACACTGGCTCAGTGC--AAATTTTAATCTTCATTGTTTTAATTCTGAAGCATAACGTGCCACAGGGAAA--GTGAGTTTCTTTACTGTTTGCCAGCAGCAA-G-GACAAAAACTGAATGGTGGGGGCCCAGGAGCTCCCAGCTTGGAGAG---AAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGG-GCAGGAGGCAGGAAGGATGGGAGGGTGTGAACAC-CGACACA----------------------------CACACACAC----------------------------------------ACGTTCTC--TCTCTTCAG------GGAAG-GGTTTTCCAGAAGCATTTG------CCCATACTCTGAATGAAGTA-TTTTCATGCCAAGCCAAACCTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 47523 1104 + 73212453 tttacatcctgatttcagtaaggcaccttgtcccagcctttggctacccttggggtccccaatccaggatcttttcagatcaccgttggccggcag-taaacctgtctcctgccatggtcagagaagggcagtcaccaggcc--------------------------------------------ag--gaggggacc-------------------------------tgagggt---------------------gtaaacac-------------------------------------ttctttcaatcaaaacaa---------ttctcagacccaccctgaacttctaccttcgggacacctggcccctccaagttctgtgcatttgggggattctgcagagcaaatgggcttgttcatgc------------ttggcttccttctttgtagacattttggg-----------gctgacactaagcaaatcatactgttccagcttccaaagctcttcagatatttg-cattcactgccatcttctttcctgttctttttgtctttgtggtttatgtcattttcattcctttatgtcattctagtagggttttgagggacagaggaaaatatgaatatattcaatgcaccatatgtaaccagaagtcCTCGTGCATTTAAAAGACATTTTTGCATACATACATGTATGTTTGCAGAACTCATTCTGATTATTTGTGT------GTACTTCCTTTTGTATGTAGATGGCCTTGCTTATCCGTTCAGCATCAGGTGTGTGAGCTGCATGAACACACACAGCTCCAGCC-C-CTCCTTTCACTGCGGCTTAGGAAGTGTTCCAGCAAGTCAACGCACCACAGTGTTTTCCATCCA---TTTTTCCACTGATGCATCTCAGAAACACAGGCAGTTGGGGTCTTTTGATCAACACACTGGCTCAGTGC--AAATTTTAATCTTCATTGTTTTAATTCTGAAGCATAACGTGCCACAGGGAAA--GTGAGTTTCTTTACTGTTTGCCAGCAGCAA-G-GACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCCCAGCTTGGAGAG---GAGGCCCTTCCAGACCCAGGGACCCGAGGGTTGGG-GCAGGAGGCAGGAAGAATAGGAGGGTATGAACAC-CGacaca----------------------------cacacacac------------------------acacacacacacacacacGTTCTC--TCTCTTCAC------GGAAG-GGCTTTCCAGAAGCATTTG------CCCATACTCTGAATGAAGTG-TTTTCATGCCAAGCCAAGCCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 111231 1113 - 81552678 TTTACATcctgatttcagtaaggcaccttgccccagcctttggctacccatggggcccccaatccagaatcttttcagatcaccgctggccggcag-taaacctgtctcctgccatggtcagagaaaggcagtcaccaggct--------------------------------------------gggagaggggacc-------------------------------tgagggt---------------------gtaaacac-------------------------------------ttctttcaaccaagacaa---------ttctcagacccaccctgaacttccaccttcgggacacctggcccctccaagttctgtgcatttgggggattctgcagagcaaatgggcttgttcatgc------------ttggcttccttctttgtagacattttggg-----------gctgacactaagcaaatcatactgttccagcttccaaa------caggtatttgtcattcactgccatcttctctcctgttctttttgtctttgtggtttatgccattttcattcctttatgtcattctagtggggttttcagggacagaggaaaatatgaatatattcaatgcaccatatgtaaccagaagtcCTTGTGAATTTAAAAGACA-TTTTGCAGACGTACGTACGAGTTTGCAGAACTCATTCCGATTA-----------------TTCCTTTTGTATGTAGATGGCCTTGCTTATCCGTTCAGCATCAGGTGTGTGAGCTGCATGAACACACACAGCTCTAGCC-C-CTCCTTTCACTGCGGCTTAGGATGTGTTCCAGCAAGTCAACGCACCACAGTGTTTTCCATCCA---TTTTTCCACTGCTGCATCTCAGAAACACAGGCAATTGTGGTCTTTTGATCAACACACTGGCTCAGTGC--AAATTTTAATCTTCATTGTTTTAATTCTGAAGCATAACGTGCCACAGGGAAA--GTGAGTTTCTTTACTGTTTGCCAGCAGCAA-G-GACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCCTAGCTTGGAGAG---GAGGCCCTTCCAGACCCAGGGACCTGGGGGTTGGG-GCAGGAGGCAGGAAGGATGGGAGGGTGTGAACAC-CGacaca----------------------------cacacacaaacacacacacacacacacacacacacacacacacacacacacaTTCTC--TCTCTTCAG------GGAAG-GGTTTTCCAGAAGCATTTG------CCCATATTCTGACTGAAGTA-TTTTCATTCCAAGCCAAACCTCC i nomLeu3.chr19 M 224 C 0 s rheMac3.chr16 77099 1087 + 80904711 tttacatgctgatttcagtaaggcaccttgccccagcctttggctacccttggggtccccaatccagaatcttttcagatcacccttggccggcag-tacacttgtctcctaccatggtcagagaagggcagtcaccaggcc--------------------------------------------gagagaggggacc-------------------------------tgcagat---------------------gtaaacac-------------------------------------ttctttcagtcaagacag---------tcctcagatccaccctgaacttccaccttcgggacacccggcccctcctagttctgtgcatttgggcgattccgcagagtaaatgggcttgtccgtgcttgtccgtgcttttggcttccttctttgtagacattttggg-----------gttgacactaagcaaatcttactgttacgggttccagagctcttcagatatctgtcattcgctgtcatcttctctccttttctttctgtcttcgtggtttatgccactttcattcctttatgtcattctagtggggttttgagggacagaggaaaacatgaatatattcagtgcaccatatgtaagcagaagtGCTTGTCCATTTAAAAGACACTTTTACGTACGTACATGTATGTTTGTAGAACTCATTCTGATTA----------------------TTTGTGTGTAGATGGC----CTTATCTGTTCGACATCACGTGTGTGAGCTGCATGA--ACACACAGATCTGGCC-C-CTCCTTTCATGGCAGCTTAGGAAGTGTTCCAGCAAGTCAAGGCACCACAG----------------TTTTTCCACTGATGCGTCTCGGAAACACAGGCAATCACGGTCTTTTGATCAACACAGTGGCTCAATGC--AAATGTTAATCTTCATTGTTTTAATTCTGAAGCATAAGGTGCCACAGGGAAA--GTGAGTTTCTTTACTATTTGCCAGCAGCTA-G-GACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCCCAGTTTGGAGAG---GAGGCCCTTCCAGACCCAGGGACCCAGGGTTTGGG-GCAGGAGGCAGGAAGGATGGGAGGGTGTGAACAC-CGACCAa----------------------------cacatacac----------------------acacacacacacacacGTACGTTCTC--TCTCTTCAA------GAATGCTCTTTTCCAGAAGCATTTA------CCCATACTCTGAATGAAGTA-TTTTCATGCCAAGCCAAACCTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 77878 1087 + 80997621 tttacatgctgatttcagtaaggcaccttgccccagcctttggctacccttggggtccccaatccagaatcttttcagatcacccttggccggcag-tacacctgtctcctaccatggtcagagaagggcagtcaccaggcc--------------------------------------------gggagaggggacc-------------------------------tgcagat---------------------gtaaacac-------------------------------------ttctttcagtcaagacag---------tcctcagatccaccctgaacttccaccttcgggacacccggcccctcctagttctgtgcatttgggcgattccgcagagtaaatgggcttgtccgtgcttgtccgtgcttttggcttccttctttgtagacattttggg-----------gttgacactaagcaaatcttactgttacgggttccagagctcttcagatatctgtcattcgctgtcatcttctctccttttctttctgtcttcgtggtttatgccactttcattcctttatgtcattctagtggggttttgagggacagaggaaaacatgaatatattcagtgcaccatatgtaagcagaagtGCTTGTCCATTTAAAAGACACTTTTACGTACGTACATGTATGTCTGTAGAACTCATTCTGATTA----------------------TTTGTGTGTAGATGGC----CTTATCTGTTCGACATCACGTGTGTGAGCTGCATGA--ACACACAGATCTGGCC-C-CTCCTTTCACGGCGGCTTAGGAAGTGTTCCAGCAAGTCAAGGCACCACAG----------------TTTTTCCACTGATGCGTCTCGGAAACACAGGCAATCACGGTCTTTTGATCAACACAGTGGCTCAATGC--AAATGTTAATCTTCATTGTTTTAATTCTGAAGCATGACGTGCCACAGGGAAA--GTGAGTTTCTTTACTATTTGCCAGCAGCTA-G-GACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCCCAGTTTGGAGAG---GAGGCCCTTCCAGACCCAGGGACCCAGGGTTTGGG-GCAGGAGGCAGGAAGGATGGGAGGGTGTGAACAC-CGACCAa----------------------------cacacacaa----------------------acacacacacacacacGTACGTTCTC--TCTCTTCAA------GAATGCTCTTTTCCAGAAGAATTGG------CCCATACTCTGAATGAAGTA-TTTTCATGCCAAGCCAAACCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 84745 1087 + 74645514 TTTACATGCTGATTTCAGTAAGGCACCTTGCCCCAGCCTTTGGCTACCCTTGGGGTCCCCAATCCAGAATCTTTTCAGATCAGCCGTGGCCGGCAG-TAAACCTGTCTCCTACCACGGTCAGAGAAGGGCAGTCACCAGGCC--------------------------------------------GAGAGAGGGGACC-------------------------------TGCAGGT---------------------GTAAACAC-------------------------------------TTCTTTCAGTCAAGACAA---------TCCTCAGACCCACCCTGAACTTCCACCTTCGGGACACCTGGCCCCTCCTAGTTCTGTGCATTTGGGCTTTTCTGCAGAGTAAATGGGCTTGTTCGTGCTTGTTCGTGCTTTTGGCTTCATTCTTTGTAGACATTTTGGG-----------GTTGACACTAAGCAAATCTTACTGTTACGGCTTCCAGAGCTCTTCACATATCTGTCATTCGCTGTCATCTTCTCTCCTATTCTTTTTGTGTTCGTGGTTTATGCCATTTTCATTCCTTTATGTCATTCTAGTGGGGTTTTGAGGGACAGAGGAAAACATGAATATATTCAGTGCACCACACGTAAGCCGAAGTGCTTGTCCATTTAAAAGACACTTTTACGTACGTACATGTACGTTTGTAGAACTCATTCTGATTA----------------------TTTGTGTGTAGATGGC----CTTATCTGTTCAGCATCACGTGTGTGAGCTGCATGA--ACACACAGATCTGGCC-C-CTCCTTTCACGGCAGCTTAGGAAGTGTTCCAGCAAGTCAAGGCACCACAGT---------------TTTTTCCACTGATGCGTCTCGGAAACACAGGCAATCACGGTCTTTTGATCAACACAGTGGCTCAATGC--AAATGTTAATCTTCCTTGTTTTAATTCTGAAGCATAACGTGCCACAGGGAAA--GTGAGTTTCTTTACTATTTGCCAGCAGCTA-G-GACAAAAAGTGAACGGTGGGGGCCCAGGAGCTCCCAGTTTGGAGAG---GAGGCCCTTCCAGACCCAGGGACCCAGGGTTtggg-gcaggaggcaggaaggaTGGGAGGGTGTGAACAC-Cgaccaa----------------------------cacatacac----------------------acacacacacacacgcgtacgTTCTC--TCTCTTCAG------GGAAG-GGTTTTCCAGAAGCATTTG------CCCATACTCTGAATGAAGTA-TTTTCATGCCAAGCCAAACCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 78489 1113 + 75148670 tttacaggctgatttcagtaaggcaccttgccccagcctttggctacccttggggtccccaatccagaatcttttcagatcccccttggccggcag-taaacctgtctcctaccatggtcagagaagggcagtcaccaggcc--------------------------------------------gagagaggggacc-------------------------------tgcaggt---------------------gtaaacac-------------------------------------ttctttcagtcaagacaa---------tcctcagacccaccctgaacttccaccttcgggacacctggcccctccaagttctgtgcatttgggcgattctgcagagtaaatgggcttgtccatgcttgtttgtgcttttggcttccttctttctagacattttggg-----------gttgacactaagcaaatcttactgttacggcttccagagctcttcagatatctgtcactcgctgtcatcttctctccttttctttctgtcttcgtggtttatgccactttcattcctttatgtcattctagtggggttttgagggacagaggaaaatatgaacatattcagtgcaccatatgtaagcagaagtGCTTGTCCATTTAAAAGACACTTCTACGTACGTACACGTATGTTTGTAGAACTCATTCTGATTA----------------------TCTGTGTGTAGATGGC----CTTATCTGTTCAGCATCACGTGTGTGAGCTGCATGA--ACACACAGATCTGGCC-C-CTCCTTTCACGGCGGCTTAGGAAGTGTTCCAGCAAGTCAAGGCACCACAG----------------TTTTTCCACTGATGCATCTCGGAAACACAGGCAATCATGGTCTTTTGATCAACACGGTGGCTCAATGC--AAATGTTAATCTTCATTGTTTTAATTCTGAAGCATAACGTGCCACAGGGAAA--GTGAGTTTCTTTACTGTTTGCCAGCAGCTA-G-GACAAAACCTGAATGGT-GGGGCCCAGGAGCTCCCAGTTTGGAGAG---GAGGCCCTTCCAGACCCAGGGACCCAGGGTTTGGG-GCAGGAGGCAGGAAGGATGGGAGGGTGTGAACAC-CGacacacacacacacacacacacacacacacacacacacacac----------------------acacacacacacacacacacGTTCTC--TCTCTTCAG------GGAAG-GGTTTTCCAGAAGCATTTG------CCCATACTCTGAATGAAGTA-TTTTCATGCCAAGCCAAACCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 891398 1089 - 1291538 ttaacatcctgatttcagttaggtgccctgccctggcctttgacaaggcttggggtccccagtccagaatcttttcagatcacccttggccggcag-tacacctgtctcccaccatgctcagggaagggcagtccccaggcc--------------------------------------------gggagacgggacc-------------------------------tg-aggt---------------------ctaaagac-------------------------------------ttctttcaatcaatacaa---------ttttcagacccacgcttaacttccctgttagggacacttggcccc-ctaagttctgtgcatttggggtattctgcagagcaaataggcttgttcatgc------------gtggcttccttctttgtagacattttggg-----------gctgacattaagtgaattataccgctccagcttccaaagctcttcagatgtc-gccatccgttgccatcttctctcctgttctttttctctttgtggttaatgccattttcattcctttatgtcactctagtggggttttaagggacagaggaaaatatgaatatattcagtgcaccatatgtaaccagcagtcCTTGTCCATTTAAAATTCATTTTTGCATACGTAC--GTATGTTTATAGAACTCATTGTGATTATCTGTGTTGTGAAATACTTCCTTTAGTATGTAGATGGCCTTGCTTATCCGTGCAGTGTCAGGTGTGTGAGCTGCATGAACACACACAGATCTAGCC-C-CTCCTTTCTCTGCGGCTTAGGAAGTGTTCCAGCAAGTCAATGCATCACAGTTTTTTCCATCT----ATTTTCTATTGATGCATCTCAGAAACACAGGCAATTGTGGTCTTTTGATCAACACACTGGCTCAATGC--AAATTTTAACCTTCATTGTTTTAATTCTGAAGCATAATGTGTCACAGGGAAA--GTGAGTTTCTTTATCATTTGCCAGCAGCAA-G-GACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCCCAGCTTGGAGAGAATGAGGCCCTTCCGGACCCAGGGACCTGGGGGTGGGGTGGGGGAGGCAGGA-----GGGCGGGTGTGGACAC-TGTCATG----------------------------CACACGTCC-------------------------------------CCCACATGTTC--TCTCTTCAG------GGAAG-GGTTTTCCAGAAGCATTTG------CCTGTACTC----TGAAGTA-TCTGCATGCCAAGCCAAACCTAC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75830467 1046 + 122082543 -TTGTA----GGTTTCAGCAAGGAACCTTA-CCCAGCCTCTGACTGTGTTT----------------CATCCTTCTAGCTCAACTCTGGCTAGCAGTTGAACCTGT----TACCAGGGTCAG-GAAGGACAGTGACCAGGCCATGTGGGTCAGGAGTCCATGGGGCAGGTATGGGGAAGAGCATGAAGGGAAGGAGGCCGGGGCTCACTCTCCATTCCtttttgcagtgttgggggttgaatgcctcctacatgctaggtaagcactttgccactgagctacaactacaggcccTATGGCCAATTCTTAAAAACAAAATAAAACCAGTACTTCCGAGACCCTTAGTGAACTTCCA--------------GATCCCTCCAAGTTCTGAGTTTTCCAGGGAAGATGCAGAG-AAGTGGGCAGGTTTGTGA------------TCAG-TTCTTCCCAAGTGAATCTTGGGAG---TTAGGGCTGCTGACAGTGAATGCATCTTCCTGTCCC-GTCTCTTTAGTTTTCCAAATA-------------------------------------------------------GCTCTCATCCCTTCATATC--------TGTGTTGAGTGGGACAGAAGAAACGACTCTTGCGCCCAGTCTATCACATGTAGCCAGAAGT-------------------------------------AGGTTTATTTAGGACCCATTTTGATTAGTT-------------------TTTCTGTATAGATGGA----CTTG---ATTTAGTGTTAGGGTTGGGAGGTGCACTG--AGACACTGATCTGGCTGG-TTTCTCTTGCTCAGGCTTTAGAAAGGTTTCAGTGAATTGGCGCTACCTATTTCAATCCATCCACCGCTTTCCCA---ACACAGGTCGG-AGCGTGGG-GATTGTGGTC-TTTGGAAGAGAGAGAGACTCCGTGTGAAAATTCTCGTGTTTATAATGTTAGTGCTGATGGGTTACGTGTCACAGGGACATGGTAAGTTTGTCT----TCTGCCAGCAGCAACA-GGCAAAAGGTTAACGGTGGTGG--------------GCTTGGAGAG---AAAGCCCT-------CCAAGGACGAAGGGACTGGT---------CAGGAGGGATGGAA----CTGGCCTC-AGGGAAG----------------------------GAAGGGCAT-------------------------------------TGGACACCTCC--CCACCCCAG------GGAGG-GGTTTCCCAGAGGCATCTGTATTTTTCTGTATTTTG-----AGTA-TTTTTTTCAGAATTTGAAACTCC i mm10.chr11 C 0 I 87 s canFam3.chr9 15651410 1064 - 61074082 -ttaactgctg--------------cctccctccagcctttggctgggcttggggtccccagtaccaa--ctttctagttcacccttggccaacag-taaacctgttttctcccagggccagggaagggc--cctgtgggct--------------------------------------------agggaaagggact-------------------------------tgggggt---------------------ct---cag-------------------------------------tgcttgcaaccaatatga---------ctttcatatccatcct-agtttccaccttaggaacacctggtccctccaagttctcca-atttggtggattctgcaaagcaaatggactggttcatgg------------ctgcctttctcccctgcagacattttggggagctggggaagctggcactaaacaaagtatactcttccatctttcaaag-ttttcagac----------------------ctctcctctcctttctggctttgtaattcacgca--tttcattcctttaggttactctgatagagcct-ggggggcagaggaga-tataaatgtatccagcccagtgtatttaaccacaagtcCCTGTCTGCTTTACAAGCATTTTCACATCTGTGCACAGAAGTTCATACAATTCATT-TGGTTA-------------ATTTTTTTTTCTAAATGTGAATGGCcttgtttttccattcaacaccaggtttgtgagctctacc---acacggagaccgagct-cattcctttcactgtggctcagagagcgctccagcg-gtcaacatacgacattctcttccatcca---tttgtctatcgatgCATCTCGGAAACACAAGTGACTACAGCCTTTTGATCAGCACACTGGCTCAATGC--AAATTCTAATCTTTATTGTTAGAATTCTGAAGCGTAACTTGTCACAGGGAAA--AC-AGTCTTTTTACCATCTGCCAGCGGCAA-GAGCCAAAAAACTAATGGTGGGGGCCTGAGAGCCC-------AGAGAG---GA---CTTTCAAGGACCAGGTATGAGGGGTGGTGG-ATGAGGGGCAGGAAGAA----AAGATATGGACACAAAACACA----------------------------TGCACGCGC------------GTGCGCGCGCGcacacacacacacacacacaTTCTCAATCTCTTTCAATCTCTGTCTT-CATTTTCCAGAAGCATTTG------CTCACATGCTGAATTAATTATTTTTCATGCCAAATCAAACCTAC i canFam3.chr9 C 0 C 0 a score=1283086.000000 s hg38.chr17_GL383563v3_alt 157836 451 + 375691 TGAAGAGAAGTGAATTCATGGCTGA-GGGAGCCACGTGCCCTGGCTGGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGC--TTCCCAGCTCCTCAAGCTGAAGACAGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTgggtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggcggatcacttgagaccaggagttcaagaccagcctggccaacatggagaaaccccatctcttctaaaaatacaaaaattaactgggtgtggtggcgggcatctgtaatcccacctactcaggaggctgaggtgagagaatcgcttgagcccgggaggtggaggttgcagtgagccgcgatcgtgccactgcaccccagcctgggcaa-caaagcgaga--c s panTro4.chr17 152039 451 + 82630442 TGAAGAGAAGTGAATTCATGGCTGA-GGGAGCCACGTGCCCTGGCTGGGGATGCACCTAAAGGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGC--TTCCCAGCTCCTCAAGCTGAAGACAGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGgactgggtgcggtgactcacacctgtcatcccagcactttggggggccgaggcgggtggatcacttgagaccaggagttcaagaccagcctggccaacatgcagaaaccccatctcttctaaaaatacaaaaattaactgggtgtggtggcgggcacctgtaatcccacctactcaggaggctgaggtgagagaatcgcttgagcccgggaggtggaggttgcagtgagccgtgattgtgccactgcaccccagcctgggcaa-cagagcgaga--c i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 48627 453 + 73212453 GGAAGAGAAGTGAATTCATGGCTGA-GGGAGCCACGTGCCCTGGCCGGGGATGCACCTGAAGGCTGCTCTTCAGCGAGTGAGTTCATAGCATCCACCAGAGC--TTCCCAACTCCTCAAGCTGAAGACAGGCTGAGCAAAAACCAGGAAGGCCATGAGGGGATTCAAAGAAACCTAATAGggctgggtgtgggggctcacacctgtcatcccagcactttgggaggccgaggcaggcggatcacttgagaccaggagttcaagaccagcctggccaacatagagaaaccccatctcctctaaaaatacaaaaattaactgggtgtggtggcaggcacctgtaatcccacctactcaggaggctgagatgagagaatcgcttgagcccaggaggcggaggttgcagtgagccgcgattgcgccactgcaccccagcctgggcaa-cagagcgcgactc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 112344 437 - 81552678 TGAAGAGAAGTGAATTCATGGCTGA-GGGAGCCACGTCCCCTGGCCGGGGATGCACCTGAAGGCTGCTCTTCAGCAAGTGAATTCATAGCATCCACCAGAGC--TTCCCAGCTCCTCAAGCTGAAGACAGGCTGA---------------GCCGTGAGGGGATTAAAAGAAACCTAATAGggctgggtgtggtggctcacacctgtaatgccagcactttgggaggccgaggcgggcggatcacttgagaccaggagttcaagaccagcctggccaacatggagaaaccccatctcttctaaaaatacaaaaattaacagggtatggtggcaggcatctgtaatcccacctactcaggaggctgaggtgagaaaatcgcttgagcccgggagatggaggttgcagtgagccacgatcgtgccactgcaccccagcctgggcaaggaaaacgaga--c i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 78186 453 + 80904711 TGAAGAGAAGTGAATTCATGGTGGA-GGGAACCACGTGCCCTGGCTGGGGATGCACCTGAAGGCTGCTCTTCAGTGAGTGAGTTCACAGCGTCCACCGGAGC--TTCCCAGCTCCTCAAGCTGAAGACAGACTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAAAAACCTAACAGggctgggcacggtggctcacacctgtcatcccagcactttgggaggccgaggcggatggatcacttgagaccaggagttcaagaccagcctggccaacatggagaaaccccatcccttctaaaactataaaaatgaactgggtgtggtggcgggcacctgtaatcccagctactcaggaggccgaggtgagagaattgcttgaacctgggatgcggaggttgcagtgaacctagattgcaccactgcactccagcctgggcaa-cagagcgagactc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 78965 453 + 80997621 TGAAGAGAAGTGAATTCATGGCGGA-GGGAGCCACGTGCCCTGGCTGGGGATGCACCTGAAGGCTGCTCTTCAGTGAGTGAGTTCACAGCGTCCACCAGAGC--TTCCCAGCTCCTCAAGCTGAAGACAGACTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAACAGggctgggcacggtggctcacacctgtcatcccagcactttgggaggccgaggcgggtggatcacttgagaccaggagttcaagaccagcctggccaacatggagaaaccccatcccttctaaaactataaaaatgaactgggtgtggtggcgggcacctgtaatcccagctactcaggaggccgaggtgagagaattgcttgaacctgggatgcggaggttgcagtgaacctagattgcaccactgcactccagcctgggcaa-cagagcgagactc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 85832 453 + 74645514 TGAAGAGAAGTGAATTCATGGCGGA-CGGAGCCACGTGCCCTGGCCGGGGATGCACCTGAAGGCTGCTCTTCAGTGAGTGAGTTCACAGCGTCCACCGGAGC--TTCCCAGCTCCTCAAGCTGAAGACAGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAAcagggttgggcgcggtggctcacacctgtcaccccagcacttcgggaggccgaggcgggtggatcacttgacaccaggagttcaagaccagcctggccaacatggagaaaccccatcccttctgaaactattaaaatgaactgggtgtggtggcgggcacctgtaatcccagctactcaggaggccgaggtgagagaatcgcttgaacctgggatgcagaggttgcagtgaacctagattgcgccactgcactccagcctgggcaa-cagagcgagactc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 79602 453 + 75148670 TGAAGAGAAGTGAATTCATGGCGGA-GGGAGCCACGTGCCCTGGCCGGGGATGCACCTGAAGGCTGCTCTTCAGCGAGTGAGTTCACAGCATCCACCGGAGC--TTCCCAGCTCCTCAGGCTGAAGACAGGCTGAGCAAAAACCAGGCAGGCCATGAGGGCACTCAAAGAAACCTAACAGggccgggcgcagtggctcacacctgtcatcccagcacttcgggaggccgaggcaggtggatcacttgagatcaggagttcaagaccagcctggccaacatggagaaacgccatctcttctaaaaatacaaaaattaactgggtgtggtggcgggcacctgtaatcccagctactcaggaggtcgaggtgagagaattgcttgaacctgggatgcggaggttgcagtgaacctagattgtaccactgcactccagcctgggcaa-cagagcgagactc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 892487 451 - 1291538 TGAAGAGAAGTGAACTAATGGCTGAGGGGAGCCACATGCCCTGGCCGGGGAGTTGCCTGAAGGCTGCTCTGC----AGTGAGTTAACAGCATCCACCAGAACCATTCACAGCTCCTCAAGCTGAAGACAGGCTGAGCAAAAACCAGGTGGGCCGTGAAGGGATTCAAATAAACCTAATAGggccgggcgcaggggctcacgcctgttatcccaacactttgggaggccaaggcaggcagatcacttgaaaccaggagtttgagaccagcctgcccaacatggcaaaaccttatctcttctaaaaatacaaaaattagctgggcatggtggtgggcacctgtaatctcacctactcaggaggctaaggtgggagaaccgcttgagcctgggaggcagaggctgaagtgagctgagatcatgccactgcactccagactggatga-ca-cgcaagactc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15652474 168 - 61074082 TGAAGAGAAGTGAATTAAAGGCTTCGGGGGGCCTTGTACCCCACCTGGGGATGCAACAGAAGGCTGTTCTTCAATGAGTGAACTCATAGTATCCACTAGAACCCTTCCCCACTCCACAAGCTGGGGAGAGGCTGAGCAGAGCCTGGGGAGGCTGTCAG----------------------------------------------------------------------------------------------AGGGGTTCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75831513 87 + 122082543 I a score=101344.000000 s hg38.chr17_GL383563v3_alt 158287 37 + 375691 tgtgtcaaaaacaaacaaacatacaaaaaccaa-------------agaa s panTro4.chr17 152490 37 + 82630442 tgtctcaaaaacaaacaaacatacaaaaaccaa-------------agaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 49080 37 + 73212453 tgtctccgaaacaaacaaacatacaaaaaccaa-------------agaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 112781 37 - 81552678 tgtctcaaaaacaaacaaacatacaaaaaccaa-------------agaA i nomLeu3.chr19 C 0 M 767 s rheMac3.chr16 78639 37 + 80904711 tgtctcaaaaccaaacaaacatacaaaaaccaa-------------agaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 79418 37 + 80997621 tgtctcaaaaccaaacaaacatacaaaaaccaa-------------agaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 86285 37 + 74645514 tgtctcaaaaacaaacaaacatacaaaaaccaa-------------agaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 80055 33 + 75148670 tgtctcaa----aaacaaacatacaaaaaccaa-------------agaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 892938 33 - 1291538 catctcag----aaacaaacacacaaaaaccaa-------------agaa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75831600 50 + 122082543 TGTTTCAGGGTGGAACAAAAACCCAGAGGCCAATAGGGGGCTTCAGGGAA i mm10.chr11 I 87 C 0 s canFam3.chr9 15652642 7 - 61074082 ------------------------------CAA-------------GGAA i canFam3.chr9 C 0 C 0 a score=620978.000000 s hg38.chr17_GL383563v3_alt 158324 304 + 375691 -aCTAAACAGACCCAGGTTTCACT-GCGGTCCTGGGCCAGCCCACGGGA--GGGGGGCACTGCGCCTGCCTCCCAGAGCTGAAGGGAGAGGGAGA-GGGTGGGTG----AGTCTCCCCCT-----------------------CACTGCTCTGGCTCTGATGCTCACCTCTAAGGGGCCACACGCAGCTTCGGAGGCCGTGCCCTAGGTTTCATTTAGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGAC---ACTGCATGTGGGAAA------------------------CCCCCCAGCCC-AACCCAAGACACGCGCAAACTTAAAATCATCAC-CAGGTAG s panTro4.chr17 152527 306 + 82630442 -aCTAAACAGACCCAGGTTTCACCCGCAGTCCTGGGCCAGCCCAAGGGA--GGGGGGCACTGCTCCTGCCTCCCAGAGCTGAAGGGAGAGGGAGA-GGGTGGGTG----AATCTCCGCCT-----------------------CACTGCTCTGGCTCTGATGCTCACCTCTAAGGGGCCACACGCAGCTTCGGAGGCCGTGCCCTAGGTTTCATTTAGTCTTGCCATTAATATAGCAATGGAGATAGCCCCACCGGGCGGCCCCTCTGAC---ACTGCATGTGGGAAA------------------------TGCCCCAGCCCCAACCCAAGACACACACAAACTTAAAATCATCAC-CAGGTAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 49117 306 + 73212453 -aCCAAACAGAGCCAGGTTTCACCCGCGGTCCTGGGCCAGCCCACGGGA--GGGGGGCACTGCTCCCGCCTCCCAGAGCTGAAGGGAGAGGGAGA-GGGTGGGTG----AATCTCACCCT-----------------------CACTGCTCTGGCTCCGATGCTCGCCTCTAAGGGGCCACACGCAGCTTCGGAGGCCGTACCCTAGGTTTCATTTAGTCTTACCATTAATACAGCCACGGAGAAAGCCCCGCCGGGCAGCCCCTCTGAC---ACTGCATGTGGGAAA-----------------------CCCCCCCAGCCC-AACCCAAGACACACGCAAACTTAAAATCATCAG-CAGGTAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 78676 293 + 80904711 -----aCCAGAGCCAGGTTTCTCCTGCGGTCCTGGGCCAGCCCATGGGA---GGGGGCACTGCTCCTGCCTCCCAGAGCTGAAGGGAGAGGGAGA-GGGTGGGTG----AATCTCACGCT-----------------------CACTGCTCTGGCTCCAGTGCTCGCGTCTAAGGGACCACACGCAGCTTCAGAGGCCGTGCCCTAG----CATTTCATCTT-CCATTAATACAGCAAC-GAGAAAGCCCGGCCAGGCGGCCGCTCAGAC---ACTGCGTATGGGAAG-------------------------CCCCCGGCCC-AGCCCAACACACACGCAAACTTAAAATCATCAC-AAGGTAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 79455 293 + 80997621 -----aCCAGAGCCAGGTTTCGCCTGCGGTCCTGGGCCAGCCCATGGGA---GGGGGCACTGCTCCTGCCTCCCAGAGCTGAAGGGAGAGGGAGA-GGGTGGGTG----AATCTCACGCT-----------------------CACTGCTCTGGCTCCAGTGCTCGCGTCTAAGGGACCACACGCAGCTTCAGAGGCCGTGCCCTAG----CATTTCATCTT-CCATTAATACAGCAAC-GAGAAAGCCCGGCCAGGCGGCCGCTCAGAC---ACTGCGTGTGGGAAG-------------------------CCCCCGGCCC-AGCCCAACACACACGCAAACTTAAAATCATCAC-AAGGTAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 86322 293 + 74645514 -----accaGAGCCAGGTTTTGCCTGCGGTCCTGGGCCAGCCCATGGGA---GGGGGCActgctcctgcctcccagagctgaagggagagggaga-gggtgggTG----AATCTCACGCT-----------------------CACTGCTCTGGCTCCAGGGCTCGCCTCTAAGGGACCACACGCAGCTTCAGAGGCCGTGCCCTAG----CATTTCGTCTT-CCATTAATACAGCAAC-GAGAAAGCCCGGCCAGGCGGCCGCTCGGAC---ACTGCGTGTGGGAAG-------------------------CCCCCAGCcc-aacccaacacacacacaaacttaaaATCATCAC-AAGGTAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 80088 293 + 75148670 -----aCCAGAGCCAGGTTTCGCCTGCGGTCCTGGGCCAGCCCATGGGA---GGGGGCACTGCTCCTGCCTCCCAGAGCTGAAGGGAGAGGGAGA-GGGTGGGTG----AATCTCACGCT-----------------------CACTGCTCTGGCTCCAGGGCTCGCCTCTAAGGGACCACACACAGCTTCAGAGGCCGTGCCCTAG----CGCTTCATCTT-CCATTAATACAGCAAC-GAGAAAGCCCGGCCAGGCGGCCCCTCGGAC---ACTGCGTTTGGGAAG-------------------------CCCCCAGCCC-CACCCAGGACACACGCAAACTTAAAATCATCAC-AAGGTAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 892971 331 - 1291538 -CCCTAAAAATTCCAGGTTTCACCTGCAGTCCTGGGCCAGCCCAAGGGA-GGGGGGGTCCTGCTCCTGCCTGCCAGAGCTGAAGAGAGGGGGA----GGTGGGTG----AATCTCACACCCCACTGAAGGGAGGGGAGGTGGGCGCTGCTCTGGCTCCAGTGCTCACCTCTAAGGG-CCACACGCAGCTTCAGAGGCCATGCCCTAGGTTTCATTTCATCTTGCCATTAATATAGCAATGGAGAAAGCTCCACCTGGCTGCCCCTCTGAC----TTGCATGTGGGAAGTACCC-----------------CCCGCCCCAGCCC-AACCCAAGACCCAAGCAAACTTACAATAATCAC-AAGGTAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75831650 285 + 122082543 ---ACCTCAAAGCTGGATTTAACTCA-GCTCCTGGACAAGCCTCGGGGCAAATAGGACCCTGTTCTGGCCTCCAACAGTTGAAGGAAGAGGGAAAGGGGTGGGTGCTCCAGGCTAACACT--------------GGGGGTGGGGGCGGGGGTGGGT----TGCTCAGCTCTACAGGGTCACACTGAGGGT--------------TAGGTT--------TCTCATCATTAGTACC------AAGAAAGCCCTGTGTGGTC-CCACCCAAACTTCAGTGCATATAGGAAG----------------------GCCTTCTCAGCCC-AACCCAAGACCCAAGCAAA--TAGAGATGTGAC-TGGG--- i mm10.chr11 C 0 C 0 s canFam3.chr9 15652649 284 - 61074082 CCCAAGTGAGAGCCAGGTCTGGATACTGCTCCTGAGCCAGTCTCGAGCA--------------------------------------------AA-GGGCAGGCG----ACCTTCACTCT-----------------------C------TAGGATCTGCTGCTCATCTCTTGGGG-CCAAGTTCAGCCTGGAAGGGCAATGTTCAGGGATGGATTCCTCTT-CCATTAATACAAATATGGAGAAAGCCCAGTCCAGTGTCCTCCGAAACCGCAGTGCATATGGGAGGGCCCCCTGAGTTGGGGCTGTAGGCCCTTCTGGCCC-AACCCAGGACAAGGACAAACCTAAAATGAACGTGGAGGTAG i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 112818 767 - 81552678 M a score=472887.000000 s hg38.chr17_GL383563v3_alt 158628 199 + 375691 ----ATTGGGGGTGTGG----GAGGGGAGGGTAATAAAT-AAGGTCGGGGGCTGAGGGCAGTGGTTGGAGGGGGTGGCGGATGCAGACAGCTCCCCAGGAGAGA----AGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGA-------CGGCTCCCAACACTGGTTTGTTGAGT-------CATG----GCCAACAGGGT--GTCTGGTGAGGGCACAAGGACCGGTCAG s panTro4.chr17 152833 202 + 82630442 ----ATTGGGGGTGTGG----GAGGGGAGGNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAGGGCGCAGAA-GGCACTGAGGTGGGGAGGCAGA-------CGGCTCCCAACACTGGTTTGTTGAGT-------CGTG----GCCAACAGGGT--GTCTGGTGAGGGCACAAGGACCGGTCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 49423 197 + 73212453 ----ATTGGGGGTGTGG----GA--GGAGGGCAATAAAT-AAGGTCAGGGGCTGAGGGCAGTGGGTGGAGGGGGTGGCGGATGCAGACAGCTCCCCAGGAGAGA----AGGGGTGCAGAAAGGCACTGAGTGGGGGAGGCAGA-------CAGCTCCCAACACTGGTTTGTCGAGT-------CATG----GCCAACAGGGT--GTCTCACGAGGGCACAAGGGCCGGTCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 113588 198 - 81552678 ----ATTGGGGGTGTGG----GAGGGGAGGGCAATAAAT-AAGGTCAGGGGCTGAGGGCAGTGGTTGGAGTGGG-GGTGGATGCAGAGAGCTCCCCAGGAGAGA----AGGGGCGCAGAAAGGCACTGGGTGGGGGAGGCAGA-------CAACTCCCAACACTGGTTTGTTGAGT-------CATG----GCCAACGGGGT--GTCTGGCGAGGGCACAAGGACCGGTCAG i nomLeu3.chr19 M 767 C 0 s rheMac3.chr16 78969 197 + 80904711 ----GTTGGGGGTGTGG----GAGGGGAGGGCAATAAAT-AAGGTCAGGGGCTGAGGGCGGTGGTTGGAGGGGGCGGCGGATGCAGACGGCTCCCCGGGAGAGA----AGGGGCGCAGAAAGGCACTGGGTCGGGGAGGCAGA-------CAGCTCCCAACACTGGTTTGTTGAGT-------CATG----GCCAACAGGGT--GGCTGGCGAGGGCACAAGGACCGGTC-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 79748 197 + 80997621 ----GTTGGGGGTGTGG----GAGGGGAGGGCAATAAAT-AAGGTCAGGGGCTGAGGGCGGTGGTTGGAGGGGGCGGCGGATGCAGACGGCTCCCCGGGAGAGA----AGGGGCGCAGAAAGGCACTGGGTCGGGGAGGCAGA-------CAGCTCCCAACACTGGTTTGTTGAGT-------CATG----GCCAACAGGGT--GGCTGGCGAGGGCACAAGGACCGGTC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 86615 197 + 74645514 ----GTtgggggtgtgg----gaggggagggcaataaat-aaggtcaggggctgagggcagtggttggagggggcGGCGGATGCAGACAGCTCCCCGGGAGAGA----AGGGGCGCAGAAAGGCACTGGGTCGGGGAGGCAGA-------CAGCTCCCAACACTGGTTTGTTGAGT-------CATG----GCCAACAGGGT--GGCTGGCGAGGGCACAAGGACCGGTC-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 80381 197 + 75148670 ----GTTGGGGGTGAGG----CAGGGGAGGGCAATAAAT-AAGGTCAGGGGCTGAGGGCGGTGGTTGGAGGGCGTGGCGGATGCAGACAGCTCCCCGGGAGAGA----AGGGGCGCAGAAAGGCACTGGGTTGGGGAGGCAGA-------CAGCTCCCAACACTGGTTTGTTGAGT-------CATG----GCCAACAGGGT--AGCTGGCGAGGGCACAAGGACCGGTC-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 893302 193 - 1291538 ----GTTGGGGTTGTGG----G---GGGGGCCAATAAAT-AAGGTT-GGGGTTGAGGGCAGCGGTGGGAGGG-GTGGTGGATGCAGAAGGCCCCCCAGGAAAGA----AGGGGTACAGAAAGGCACTGGGT-GGGGATGTAGA-------CAGCTCCCAACACTGGTTTGTTGCGT-------CATG----GGCAACAGGGT--GGCTGGCGAGGGCATAGGGACCTGTCCG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75831935 154 + 122082543 -------------ATGG----GA--GAAGAACAATAAATAAAGGTGGGGTGCTGAGTGAGATAGTCGATAAGG----------------------CATGACAGG----GTGGGGGCAAGCATGCTCAG------------------------TCCCCAAACACTGGCTTGTTGAGT-----AGCACGTCAAGGTATCAAGGA--GCTTGG-GAAGCCTCAAGAACCT-TCAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15652933 208 - 61074082 CCTGGGGGAGGGCGCGGAGGCGAGCGGTAGAGAATAAAT-AAAGGTCATGGCTGAGGGTTGTGGCAGTGGGGGGT--------------GCCTCCCAGGACAGA----A-GGGTGCAGAAAGGCACTGAGTGGGGGGAAAGGAGACTCAGCACCCCCAAACACTGGTTTGCTGGGTCTGAGGTCACG----TCTAACAGGGCTGGTCCACTGAGGGCTCCAACACCGCTCCC i canFam3.chr9 C 0 I 28 a score=66397.000000 s hg38.chr17_GL383563v3_alt 158827 24 + 375691 GGAGGAGCCGGGCAGGGTCTGG------------CA s panTro4.chr17 153035 24 + 82630442 GGAGGAGCCGGGCAGGGTCTGG------------CA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 49620 24 + 73212453 GGAGGAGCCGGGCAGGGTCTGG------------CA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 113786 24 - 81552678 GGAGGAGCCGGGCAGGGTCTGG------------CA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 79166 24 + 80904711 GTGGGAGCCGGGCAGGGTCTGG------------CA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 79945 24 + 80997621 GTGGGAGCCGGGCAGGGTCTGG------------CA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 86812 24 + 74645514 GTGGGAGCCGGGCAGGGTCTGG------------CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 80578 24 + 75148670 GGGGGAGCCGGGCAGGGTCTGG------------CA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 893495 36 - 1291538 GCAGCAGCCTCGCAGGGTCTGGTTCCAGCTTAGTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75832089 23 + 122082543 AGGGGCGCTCTGCGAGG-CTGG------------CC i mm10.chr11 C 0 C 0 e canFam3.chr9 15653141 28 - 61074082 I a score=1153094.000000 s hg38.chr17_GL383563v3_alt 158851 409 + 375691 G--------------GAATCCTCCACAGGGA-AGTCTGTTCCAGGCACCAGAC--ACCTCAGCCCAGGCAGCTGGAGGGGCCTGCTGGAGCTGCGTCAGCAGCGGGGGCTCGTCCAGGTGTGTCTTTTACCTTTGGATGAGAGA---AAAGGCCACCACATGGTG----AGCAGCGGTG--------------------------------------------------------GAGTCCCTCCCTCCCCGG---TGACAGCTCGGCCTT----TGGGAATGAGATGG---------------------AGGAGCTGGTGGGGAAGGCAGGCTTCTGCTGACAGCATCCG-TGCCTCAGccc-----gagctcgag-----------------------------acca---gcacc-----gctctgctc--tgctgtgtgatggcaggaaagtcacctgcccctctgggcttca----ggccctcc--tcctaacccaggtgat--caacat-ggcgacctcaggatgccggaaggagcaaatgggCACGGAAAGAGAACACCCTCCT s panTro4.chr17 153059 409 + 82630442 G--------------GAATCCTCCACAGGGA-AGTCTGTTCCAGGCACCAGAC--ACCTCAGCCCAGGCAGCTGGAGGGGCCTGCTGGAGCTGCGTCAGCAGCGGGGGCTCGTCCAGGTGTGTCTTTTACCTTCGGATGAGAGA---AAAGGCCACCACATGGTG----AGCAGCAGTA--------------------------------------------------------GAGTCCCTCCCTCCCCGG---TGACAGCTCGGCCTT----TGGGAATGAGATGG---------------------AGGAGCTGGTGGGGAAGGCAGGTTTCTGCTGACAGCACCCG-TGCCTCAGccc-----gagctcgag-----------------------------acca---gcacc-----actctgctc--tgctgtgtgatggcaggaaagtcacctgcccctctggtcttca----ggccctcc--tcctaacccaggtgat--caacat-ggcgacctcaggatgccggaaggagcaaatgggCACGGAAATAGAACACCCTCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 49644 409 + 73212453 G--------------GAATCCTCCACAGGGA-AGTCTGTTCCAGGCAGCAGAC--ACCTCAGCCCAGGCAGCTGGAGGGGCCTGCTGGAGCTGCGTCAGCAGCGGGGGCTCGTCCAGGTGTGTCTTTTACCTTTGGAGGAAAGA---AAAGGTCACCGCGTGGTG----AGCAGGGGTG--------------------------------------------------------GAGTCCCTCCTTCCCCGG---TGACAGCTTGGCCTT----TGGGAATGAGATGG---------------------AGGAGCGGGTGGGGAAGGCAGGCTTCTGCTGACAGCACCCG-TGCCTCAGcct-----gagctcgag-----------------------------acca---gcgcc-----gctctgctc--tgctgtgtgatggcaggaaagtcacctgcccctctgggcttca----ggcccccc--tcctaacccaggtgat--caacat-ggcaacctcaggatgccggaaggagcaaatgggCACGGAAATAGAACATCCTCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 113810 466 - 81552678 G--------------GAATCCTCCACAGGGA-AGTCTGTTCCAGGCACCAGAC--CCCTCAGCCCAGGCAGCTGGAGGAGCCAGCTGGAGCTGCGCCAGCAGCGGGGGCTCGTCCAGGTGTGTCTTTTACCTTTAGAGGAGAGA---AAAGGCCACCACATGGTG----AGCAGGGGTGTGTCCCTCCCTCCCCGGTGACAGCTCAGCCTTTGGGAATGAGATGGAGGAGCTGGTGTGTCCCTCCCTCCCCGG---TGACAGCTCAGCCTT----TGGGAATGAGATGG---------------------AGGAGCTGGTGGGGAAGGCAGGCTTTTGCTGACAGCACCCGTTGCCTCAgccc-----gagctcgag-----------------------------acca---gcgcc-----gctctgctc--tgctgtgtgatggcaggaaagtcgcctgcccctctgggcttca----ggcccccc--tcctaacccaggtgat--caacgt-ggcgacctcaggatgccggaaggagcaaatgggcacggaaatagaacatcctcct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 79190 406 + 80904711 C--------------GAATCCTCCACAGGGA-AGTCTGTTCCAGGCACCAAAC--GCCTCAGCCCCGGCAGCTGGAGG-GGCAGCTGGAGCCGCGTCAGCACTGGGGGCTCGTCCAGGTGTGTCTCTTACCTTTGGAGGAGAGA---AGAGGCCACCGCA-GGTG----AGCAGGGGTG--------------------------------------------------------GAGTCCCTCCCGCCCCAG---TGACAACCCGGCCTT----TGGGAATGAGACGG---------------------AGGGGCTGGAGGGGAAGGCAACCTTCTGCTGACAACACCCG-TGCCTGAGCCC-----AAACTCGAG-----------------------------ACCA---GCGCC-----ACTCTGCTC--TGCTATGTGATGGCAGGAAAGTCACCTGCCCCTCTGGGCTTCA----GGCCC-CC--TCCTAACCCAGGTGGC--CAACGT-GGCGACCTCAGGATGCCGCAAGGAGCAAATGGGCAGGGAGATAGAAAATCCTCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 79969 406 + 80997621 C--------------GAATCCTCCACAGGGA-AGTCTGTTCCAGGCACCAAAC--GCCTCAGCCCCGGCAGCTGGAGG-GGCAGCTGGAGCCGCGTCAGCACTGGGGGCTCGTCCAGGTGTGTCTCTTACCTTTGGAGGAGAGA---AGAGGCCACCGCA-GGTG----AGCAGGGGTG--------------------------------------------------------GAGTCCCTCCCGCCCCAG---TGACAGCCCGGCCTT----TGGGAATGAGACGG---------------------AGGGGCTGGAGGGGAAGGCAGCCTTCTGCTGACAACACCCG-TGCCTGAGCCC-----AAACTCGAG-----------------------------ACCA---GTGCC-----GCTCTGCTC--TGCTATGTGATGGCAGGAAAGTCACCTGCCCCTCTGGGCTTCA----GGCCC-CC--TCCTAACCCAGGTGGC--CAACGT-GGCGACCTCAGGATGCCGCAAGGAGCAAATGGGCAGGGAGATAGAAAATCCTCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 86836 359 + 74645514 C--------------GAATCCTCCGCAGGGA-AGTCTGTTCCAGGCACCAAAC--GCCTCAGCCCT-------------GGCAGCTGGAGCCGCGTCAGCGCTGGGGGCTCGTCCAGGTGTGTCTTTTACCTTTGGAGGAGAGA---AGAGGCCACCGCAGGGTG----AGCAGGGGTG--------------------------------------------------------GAGTCCCTCCCGCCCCAG---TGACAGCCCAGCCTT----TGGGAATGAGACGg---------------------aggggctggaggggaaggcagCCTTCTGCTGACA-------------------------------------------------------------------------------GCTCTGCTC--TGCTGTGTGATGGCAGGGAAGTCACCTGCCCCTCTGGGCTTCA----GGCCC-CC--TCCTAACCCAGGTGGC--CAACGT-GGCGACCTCAGGATGCCGCAAGGAGCAAATGGGCAGGGAGATAGAAAATCCTCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 80602 395 + 75148670 G--------------GAATCCTCCGCAGGGA-CGTTGGTTCCAGGCACCAAAC--GCCTCAGCCCC-------------GGCAGCTGGAGCCGCGTCAGCACTGGGGGCTCGTCCAGGTGTGTCTCTTACCTTTGGAGGAGAGA---AGAGGCCACCGCAGGGTG----AGCAGGGGTG--------------------------------------------------------GAGTCCCTCCCGCCCCAG---TGACAGCCTGGCCTT----TGGGAATGAGACGG---------------------AGGGGCTGGAGGGGAAGGCAGCCTTCTGCTGACGACACCCG-TGCCTGAGCCC-----GAACTCGAG-----------------------------Acca---gcgcc-----gctctgccc--tgctgtgtgatggcaggaaagtcacctgcccctctgggcttca----gGCCC-CC--TCCTAACCCAGGTGGC--CAACGT-GGAGACCTCAGGATGCCGGAAGGAGCAAATGGGCAGGGAGATAGAAAATCCTCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 893531 400 - 1291538 A--------------GAATCTTCCACGCGGA-AGTCTGTTCCAGGCACCCAAT--GCCTCAGCCCAGGCAGCTGGAGGGGCCTACTGGAGCCACATCAGTAGCGGGGGCTGGCCCAGGTGTGTCTTTTACCTTTGGAGGAAAGA---AAAGGCCACCACTCGGTG----AGCAAGGGTG--------------------------------------------------------GAGTCCCTCCCTCCCCAG---TGACAGTGGGGCCTT----TGGGAATGAGAAGG---------------------AGG-GCTGGTGGGGAAAGTGGGCTTCTGCTGACAGCACTCA------------------GGCTCGAG-----------------------------ACCA---GCACCACACTGCTCTGCGC--TGCTGTGTGATGGCGGCAAAGTCACCAGTCACTCTGGGCTTCA----GGCCA-CC--TCCCAACCCAGGTGAC--CAACAC-AGCAACCCCAAAATGCCGGAAGGAGCAGACGGACACAGAAATAGAAAATCCTCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75832112 428 + 122082543 CCGTTGTCCCTCTCTGAATCTTCCTCTGGAAGAGTTTG------------------CCTCAGCC--------TGGAGATGTCAGCTG--GCCACTTCAGTAGCGGGGAGTTGCCCATGTGTGTCTTTTGCCTTTGGGAGAGAGAGGGAAAGACCACTGAGTAGTGAGTAAGTAGAGGTG--------------------------------------------------------G-----CTTCTTCCCCAGTGATGACAGCCCAGCTTT------GGGATGAAATAG---------------------ATG---TGACAAGACAGG--GCCTTCTT------GCACCCA-TGACTGAGCACTAGGGAGGGTCGAGGGCTGGCCCGGGGCAGAGAGAGCCTGCATACCAGCTGCACT-----GTTCCACCG--TGCTGTGTGCTCTCAAGCTTGTTCTCTGCACCCGTGGGCTTCA----GTCTG-TCTGTCCAAACGCAGGTGTCTTCAACAC-AGTGACCTCAGTATGCCAGGAGAAGCCT-TGGACCCAGGAAGA-AACACTCCCTT i mm10.chr11 C 0 I 635 s canFam3.chr9 15653169 412 - 61074082 G--------------AACTCTTCCACTGGGA-CATCTGCTCCCTGCACCAAGCGGGCCCGTGCCAGGGCTGGCGGACAGAGCTTCGGAGGCCGTGTCAGCAGCGGGGGATTGTCCAGGTGTGCTTCTTGCCTTCAGGGGAGAGAAAAAAAGGCCACTATAGGGTG----AGCAGAGGCG--------------------------------------------------------GGGATCCT----CCCCAG---TGACAGGCGGGCTCCAGCCTGCACCTGAAGCAGCTTCCCTTTCTGCCCCTAAACGGGGGTGGGCGGGGAGGA-------CTGGGGCTGGTGCCCT-GGGCAGGGGAC-----ACACGC--------------------------------TCCA---GCAGA-----GCTCTGCTCCTTCCGCTGTCGCTGCCAACAAATCATCTACTCC-CTGTGCTTCAGCGTGGCCA-----TTGAGACGGGGGCAGC--GAACACGGGCGATCTTAG-ATGCCAGGAAGAACAAAC-GACGTGGAGT-------------- i canFam3.chr9 I 28 C 0 a score=878877.000000 s hg38.chr17_GL383563v3_alt 159260 331 + 375691 TTAAGCCAATCTTTCCCCAGGTTGTTTCTTAAGCCCAGGAACC--CTCTCTGCACTGGGCCACACAGCTTCCGCCTTTATCACTGGACATTTACTGAGGACCTCCTAGGGGAAGGCAGTCCATGT-GACACTGGATTTTGTCTCCCCGGAACCCTGTGAAGGACACCG-------------taccgataatagaactgggcacag-agagatcaaatataagggtgaaccatattgaactgccgatatttcactgtttttgaaccacaaaaatgcaatttcaattgggcgcagtggctcttgcctgtaatcccaacactttgggaggccaaggtgggaggactgtttc s panTro4.chr17 153468 333 + 82630442 TTAAGCCAATCTTTCCCCAGGTTGTTTCTTAAGCCCGGGAACCCTCTCTCTGCGCTGGGCCACACAGCTTCCCCCTTTATTACTGGACATTTACTGAGGACCTCCTAGGGGAAGGCAGTCCACGT-GACACTGGATTTTGTCTCCCTGGAACCCTGTGAAGGACACCG-------------taccgataatagaactgggtacag-agagatcaaatataagggtgaaccatattgaactgctgatatttcactgtttttgaaccacaaaaatgcaatttcaattgggcgcagtggctcttgccagtaatcccaacactttgggaggccaaggtgggaggactgtttc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 50053 319 + 73212453 CTAAGCCAATCCTTCCCAAGA-TGTTTCTTAAGCCCAGGAACCCTCTCTCTGCACTGGGCCACACAGCTTCCCCCTTTATTACCAGACATTTACTGAGGACCTCCTAGGGGAAGGCAGTCCATGT-GACACTGGATTTTGTCTCCCCGGAACCCTGTGAAGGAcactg-------------tactgataatagaactgggcgcag-agagatcgaatataagggtgaaccatattgaactgctgatatttcactgtttttgaaccacaaaaatgcaatttcaactgggcgcagtggctcctgcctgtaatcccaacact-------------gtgggaggactgtttg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 114276 332 - 81552678 ctaagccaatccttccCAAGT-TGTTTCTTAAGCCCAGGAACCCTCTCTCTGCACTGGGCCACACGGCTTTCccctttatt-ccggacatttactggggaccgcctaggagaaggcagtccatgt-gacactggattttgtctccccggaaccctgtgaaggacactg-------------tactgataacagaactgggcgcagaagagatcaaatataagggtgaaccatattgaactgctgatatttcactgtttttgagccacaaaaatgcaatttcaattgggcgtggtggctcctgcctgtaatcccaacactttgggaggccaaggcgggaggactgtttc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 79596 329 + 80904711 CCACGCCCATCCTTCCCACAT-TGTTTCTTAAGCCCAGGAACCCCCTCTCTGCGCTGGACCACACGGCTTCCCCCTTTATTACCGGACGTTTACTGAGGACCTCCTAGGGGAAGGCCGTCCACAT-GACACTGACTTTTCTCTCCCCAGAACCCTGCGAAGGACACCG-------------CACTGATAACAGAACCGGGCGC---AGAGATCAAACCTAAGGGCGAACCATATCGAACTACTGATATTTCAC-GTTTTTGAACCAGAAAAACGGAATTTCAATTgggcgcggtggctcttgcctgtaatcccaacactttgggaggccaaggtgggaggactgtttg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 80375 329 + 80997621 CCACGCCCATCCTTCCCACAT-TGTTTCTTAAGCCCAGGAACCCCCTCTCTGCGCTGGACCACACGGCTTCCCCCTTTATTACCGGACGTTTACTGAGGACCTCCTAGGGGAAGGCCGTCCACAT-GACACTGACTTTTCTCTCCCCAGAACCCTGCGAAGGACACCG-------------CACTGATAACAGAACCGGGCGC---AGAGATCAAACCTAAGGGCGAACCATATCGAACTACTGATATTTCAC-GTTTTTGAACCAGAAAAACGGAATTTCAATTgggcgcggtggctcttgcctgtaatcccaacactttgggaggccaaggtgggaggactgtttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 87195 329 + 74645514 CCACGCCCATCCTTCCCACAT-TGTTTCTTAAGCCCAGGAACCCCCTCTCTGCGCTAGGCCACACGGCTTCCCCCTTTATTACCGGACGTTTACTGAGGACCTCCTAGGGGAAGGCCGTCCACAT-GACACTGACTTTTCTCTCCCCAGAACCCTGCGAAGGACACCG-------------TACTGATAACAGAACTGGGCGC---AGAGATCAAACCTAAGGGCGAACCATATCAAACTACTGATATTTCAC-GTTTTTGAAccagaaaaacagaatttcaattgggtgcagtggctcttgcctgtaatcccaacactttgggaggccaaggtgggaggactgtttg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 80997 327 + 75148670 CCACCCCCATCCTTCCCACAT-TGTTTCTTAAGCCCAGGAACCCCCTCTCTGC-CTGGGCCACACGG-TTCCCCCTTTATTACCGGACGTTTACTGAGGACCTCCTAGGGGAAGGCCGTCCACAT-GACACTGACTGTTCTCTCCCCAGAACCCTGCGAAGGACACCG-------------TACTGATAACAGAACTGGGCAC---AGAGATCAAACCTAAGGGCGAACCATATCGAACTACTGATATTTCAC-GTTTTTGAACCAGAAAAACGGAATTTCAATTgggcgcagtggctcttgcctgtaatcccaacactttgggaggccaaggtgggaggactgtttg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 893931 325 - 1291538 CCAAGCTGATCCTTTCCAAGC-TGTTTCTTAAGCCTGGGAACCCTCTCTCCGCACTGGGCCACATGGCTTCC-CCTTTATTACC------CCCCAGAGGACC-CCTAGGGGAAGGCAGTCTGTGTGGACACTACATTTTGTCTCTCTGGAATCCTGTGAGGGAcacct-------------tatcgataacagaactgggtgcag-agagatcaaatataagggtgaaccatatcgaattactgatatttcactgtttttgaaccaaaaaaatgcaatttcagtttggtgcggtggctcttgcctgtaatcccagcactttgggaggccaaggtgggaggactgcttg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15653581 211 - 61074082 CTAA---AACTCCCCTCGGGT-TGTCTCACAAGCCCCGG-GCCCCTTCTAGGCTCTGGGCCACATGGCCTCCCCCTT----ATTGGATATATGT------------------------TTCATCT-CAC-----------CCTCCTCGTGGCCCTATGAGGAACACAGCTGGTCCCCACTTTTGCAATAATGGAAACAGGGTCAG-TGAGATGAGATAttaggttgagtcagatcga--tgccaatacttgactatttt----------------------------------------------------------------------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75832540 635 + 122082543 I a score=465664.000000 s hg38.chr17_GL383563v3_alt 159591 169 + 375691 agcccaggagttcgagaccagcctgggcaacatagggaga-ccccgtccctttgaaaaatacaaaaaataattagccgggcatggtggcacttgcctatagtcctagctacttggcaggctgaggcaggaggaccactggagcccaggaggtcgaggctgc-----agtgaacgg s panTro4.chr17 153801 170 + 82630442 agaccaggagttcgagaccagcctgggcaacatagggagacccccgtccctttgaaaaatacaaaaaataattagccgggcatggtggcacttgcctatagtcctagctacttggcaggctgaggcaggaagaccactggagcccaggaggtcgaggctgc-----agtgaacgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 50372 166 + 73212453 agcccaggagttcgagaccagcctgggcaacatagggaga-ccccgtccctttgaaaaatacaacaa--cattagctgggcatggcagcacttgcctatagtcctagctacttggcaggctgaggcaggaggaccgctggagcccaggaggtcgaggct-c-----ggtgaacgg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 114608 169 - 81552678 agcccaggagttcgagaccagcctgggcaacatagggaga-ccccgtccctttgaaaaataaaaaaaaaaattagccagacatggtggcactggcctacagtcctagctacttggcaggctgaggcaggaggaccactggagcccaggagatggaggctgc-----agtgaatgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 79925 167 + 80904711 agcctgggagttcaagaccagcctgggcaacacagggaga-ctccatccctttgaaaaatacaaaac--aattagccgggcctggcggcacttgccaacagtcctagctacatggcaggctgaggcaggaggacctcttgagcccaggaggtcgaggctgc-----agtgacctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 80704 167 + 80997621 agcccgggagttcaagaccagcctgggcaacatagggaga-ccccgtccctttgaaaaatacaaaac--aattagccgggcctggcggcacttgccaacagtcctagctacatggcaggctgaggcaggaggacctcttgagcccaggaggtcgaggctgc-----agtgaactg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 87524 167 + 74645514 agcccaggagttcaagaccagcctgggcaacacagggaga-ccccgtccctttgaaaaatacaaaac--aattagccgggcctggCGGCACTTGCcaacagtcctagctacttggcaggctgaggcaggaggacctcttgagcccaggaggtcaaggctgc-----agtgaactg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 81324 167 + 75148670 agcccaggagttcaagaccagcctgggcaacatagggaga-ccccgtccctttgaaaaatacaagac--aattagccgggcctggcggcacttgccaacagtcctagctacttggcaggctgaggcaggaggacctcttgagcccaggaggtcgaggctgc-----agtgaactg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 894256 171 - 1291538 agcccgggagtttgagaccagcctgggcaacacagagaga--cccatctctttgaaaaacacacaaa--aaatggccgagcatggtggcacctgcctatagtcctcgctactttgcaggctgaggcaggaggattgcttgagcccaggaggttgaggctgtaggtgagctagctg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75832540 635 + 122082543 I e canFam3.chr9 15653792 0 - 61074082 C a score=1293686.000000 s hg38.chr17_GL383563v3_alt 159760 445 + 375691 tgatcacaccagtgcactccagcccgggcaacagcatgagatcctgtctc------aaaaaaaa----aaaaaagcaatttcatatggttcaacctgggg-gtctgctcaaggtcacatggctgtgggtggcagggctgggacaagaactcg-------------------------------------------------gggctgccggattccaca-------ctgtcctctGTGGAGGACCTCCAGGAGGCTAGAGGGA-GGGGGCAGGGTCCACTCCACAGC----CAAAGATGC------CTCCCGGA---------------------------------TGCTCTGCAGCTCCT-GGGA-----GCCATCGAGTGGGGAAGGAGAG--AGG---------TGCGGCAGGCG-----TTCCTGTGGGTGGCTGCC----------------------------GGGTGCCCTCCACACCCCGGGGACGGAGATCAGCTGCTGCCCTGGTGCATGCGTGTAC-------CCA----------------------------------------------------------------------------------------------------TGAATCCTCTGGCCAGGGAGGGGCCCAACCTGCCCAGGGCTTCTTTCTTGAAGGAGA-------CAGGGCTGATCCTGCACC s panTro4.chr17 153971 494 + 82630442 tgatcacaccagtgcactccagcctgggcaacagcatgagatcctgtctc----aaaaaaaaaa----aaaaaagcaatttcatatggttcaacctgggg-gtctgctcaaggtcacatggctgtgggtggcagggctgggacaagaactcggggctgccggattccacactgtcctctGTGGGGCTGGGACAAGAACTCAGGGCTGCCGGATTCCACA-------CTGTCCTCTGTGGAGGACCTCCAGGAGGCTGGAGGGA--GGGGCAGGGTCTGCTCCACAGC----CAAAGATGC------CTCCCGGA---------------------------------TGCTCCGCAGCTCCT-GGGA-----GCCATCGAGTGGGGAAGGAGAG--AGG---------TGGGGCAGGCG-----TTCCTGTGGGTGGCTGCC----------------------------GGGTGCCCTCCACACCCCGGGGACGGAGATCAGCTGCTGCCCTGGTGCATGCGTGTAC-------CCA----------------------------------------------------------------------------------------------------TGAATCCTCTGGCCAGGGAGGGGCCCAACCTGCCCAGGGCTTCTTTCTTGAA-GAGA-------CAGGGCTGATCCTGCACC i panTro4.chr17 C 0 I 296 s ponAbe2.chr17 50538 451 + 73212453 tgatcacaccagtgcactccagcctgggctacagcatgagatcctgtctc--aaaaaaaaaaaa----aaaaaagcaatttcatatggttcaacctgggg-gtctgctcaaggtcacatggctgtgggtggcagggctgggacaagaactca-------------------------------------------------gggctgccggattccaca-------ctgtcctctGTGGAGGACCTTCAGGAGGCTAGAGGGAGGGGGGCAGGGTCTGCTCCACAGC----CAAAGATGC------CTCCAGGA---------------------------------TGCTCTGCAGCTCCTGGGGA-----GCTATCGAGTGGGGAAGGAGAG--AGG---------TGGGGCAGGCG-----TTCCTGTGGGTGGCTGCC----------------------------GGGTGCCCTCCACACCCCGGGGATGGAGATCAGCTGCCGCCCTGGTGCACGCGTGTAC-------CCA----------------------------------------------------------------------------------------------------TGAATCCTCTGGCCAGGGAGGGGCCCAACCTGCCCAGGGCTTCTTTCTTGAAGGAGA-------CAGGGCTGATCCTGCACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 114777 450 - 81552678 tgatcacaccagtgcactccagcctgggcaacagcatgagatcctgtctcaaaaaaaaaaaaaa----aaaaaagcaatttcatatggttcaacctgggg-gtctgctcaaggtctcatggccgtgggtggcagggctgggacaagaactca-------------------------------------------------gggctgccagattccaCG-------CTGTCCTCTGTGGAGGACCTCCAGGGGGCTAGAGGGA-GGGGGCAGGGTCCGCTCCACGGC----CAAAGATGC------CTCCCAGA---------------------------------TGCTCTGCAGCTCCTGGGGA-----ACCATTGAGTGGGGAAGGAGAG--AGG---------TGGGGCAGGCG-----TTCCTGTGGGTGGCTGCC----------------------------GGGTGCCCTCCACACCCCGGGAA-GGAGATCAGCTGCCGCCCTGGTGCATGCGTGTAC-------CCA----------------------------------------------------------------------------------------------------TGAACCCTCTGGCCAGGGAGGGGCCCAACCTGCCCAGGGCTTCTTTCTTGAAGGAGA-------CA-GGCTAGTCCTGCACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 80092 450 + 80904711 tggtcacaccagtgcactccagcctgggcaacagcatgagatcctgtctc------aaaaaaaaTTTTAAAAATGCAATTTCATATGGTTCAACCTGGGGAGTCtgctcaaggtcacgtggctgtgggtggcagggctgggacaagaactca-------------------------------------------------gggctgccggattccaca-------ctgtcctctGTGGAGGACCTCCAGGAGGCCAGAGGGA-GGGGGCAGGGTCCGCTCTGCGGC----CACAGATGC------CTCCCGGA---------------------------------TGCTCTGCAGCTCCTGGGGA-----ACCATCAAGTGGGGAAGGAGAG--GGG---------TGGGGCAGGCG-----CTCCCGCGGGGGGCTGCC----------------------------AGGTGCCCTCTAC-CCCTGGGGACGGAGATCAGCTGCCGCCCTGGTGCACACGTGGAC-------CCA----------------------------------------------------------------------------------------------------TGAATCCTCTGGCCAGGGAGGATCCCAACCTGCCCGGAGCTTCTTTCTTGAAGGAGA-------CGGGGCTGAGCCTGCACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 80871 450 + 80997621 tggtcacaccagtgcactccagcctgggcaacagcatgagatcctgtctc------aaaaaaaaTTTTAAAAATGCAATTTCATATGGTTCAACCTGGGGAGTCtgctcaaggtcacgtggctgtgggtggcagggctgggacaagaactca-------------------------------------------------gggctgccggattccaca-------ctgtcctctGTGGAGGACCTCCAGGAGGCCAGAGGGA-GGGGGCAGGGTCCGCTCTGCGGC----CACAGATGC------CTCCCGGA---------------------------------TGCTCTGCAGCTCCTGGGGA-----ACCATCAAGTGGGGAAGGAGAG--GGG---------TGGGGCAGGCG-----CTCCCGCGGGGGGCTGCC----------------------------AGGTGCCCTCTAC-CCCTGGGGACGGAGATCAGCTGCTGCCCTGGTGCACACGTGGAC-------CCA----------------------------------------------------------------------------------------------------TGAATCCTCTGGCCAGGGAGGATCCCAACCTGCCCGGAGCTTCTTTCTTGAAGGAGA-------CGGGGCTGAGCCTGCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 87691 450 + 74645514 tggtcacaccagtgcactccagcctgggcaacagcatgagatcctgtctc------aaaaaaaattttttaaatgcaatttcatatggttcaacctgGGGAGTCTGCTCAAGGTCACGTGGCTGTGGGTGGCAAGgctgggacaagaactca-------------------------------------------------gggcTGCCGGATTCCACA-------CTGTCCTCTGTGGAGGACCTCCAGGAGGCCAGAGGGA-GGGGGCAGGGTCCGCTCTGCGGC----CACAGATGC------CTCCCGGA---------------------------------TGCTCTGCAGCTCCTGGGGA-----ACCATCaagtggggaaggagag--ggg---------tgGGGCAGGCG-----CTCCCGCGGGGGGCTGCC----------------------------AGGTGCCCTCCAC-CTCCGGGGACAGAGATCAGCTGCCGCCCTGGTGCACACGTGGAC-------CCA----------------------------------------------------------------------------------------------------TGAATCCTCTGGCCAGGGAGGGGCCCAACCTGCCCGGAGCTTCCTTCTTGAAGGAGA-------CAGGGCTGATCCTGCACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 81491 450 + 75148670 tggtcacaccagtgcactccagcctgggcaacagcatgagatcctgtctc------aaaaaaaaTTTTTTAAATGCAATTTCATATGGTTCAACCTGGGGAGTCtgctcaaggtcacgtggctgtgggtggcagggctgggacaagaactca-------------------------------------------------gggctgccggattccaca-------ctgtcctctGTGGAGGACCTCCAGGAGGCTAGAGGGA-GGGGGCAGGGTCCGCTCTGCGGC----CACAGACGC------CTCCCAGA---------------------------------TGCTCTGCAGCTCCTGGGGA-----ACCATCAAGTGGGGAAGGAGAG--GGG---------TGGGGCAGGCG-----CTCCTGCGGGGGGCTGCC----------------------------AGGTGCCCTCTAC-CCCTGGGGACGGAGATCAGCTGCCGCCCTGGTGCACACATGGAC-------CTA----------------------------------------------------------------------------------------------------TGAATCCTCTGGCCAGGGAGGGGCCCAACCTGCCTGGAGCTTCCTTCTTGAAGGAGA-------CAGGGCTGATCCTGCACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 894427 549 - 1291538 tgatcacaccactgcactccagcctgggcaacagcatgagatcctgtctc------aaaaaaaa---------agcaatttcacgtggttcaacctggggggtctgttcaagatcccgtggctgtaggtggcagggctgggacaacgactca--------------------------------------------------ggctgcctga-tccacagtgacctctaacctctgtgGAGGACCCCTAGGAGGCTAGAGGGA-GGGGGCA-GGTCTGCTCCACAG-----CAAAGATGC------CTCCTGG----------------------------------TGCTCTGCAACTTCTGGGGA-----ACCATCAAGTCAGGGAGGGGAGGCGGG---------GGAGGCAGGCGGGGCATTCCTGC-AGTGGCTGCC----------------------------AGGTGCCCTCCAC-ACCTCGGGAGGGAGATCGGCCATTGCCCTGGTGCGTGTGTGTAC-------CCACAAATTGAGTGGGGGTGGGAAGTGGGAGAGGCATTCCCTCAGTGGCTGCTGGGTGCCCTCCACCTGGAAGGGAGATTAGCCACCGCCCTGTGTGGACCTGTGAATCCTCAGGCCAGGGAAGGGCCCAGCCCACCTGGGGCTTCTTTCTTGAAGGAGA-------CAAGGCCGATCCTGCACC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15653792 482 - 61074082 tgatcaaa-------------------------------------ggatc------aaaggaaa--------------tttcctatggttgaatctgatg-gcttgcccaagctcacgtgtctgtgggtggtagggctgggacacaaacgtg-------------------------------------------------g------ttgattccaaa-------ctgtcctctGTGGAGGA-TTTCAGGAGGCCAGGCGGA-GGGGAGCTGGTCTGCTCCACGGCCCTGCCAAGGGGCCTACCTCTCCCAGAGACCTGCCCACCTGTGGCCTCTCTTACGTGCCCTGCCCTGCAGCTTCCTGGCATTATGACGGTAGAGAGGGGGAGGAGGG--AAGACAGGGAGCAGGTGCGGGCA-----CTGGGGCGGGGGGCTCCCGCAGGCTTGCATGCAGATTCCCGCAGTGAGCTGTCCTCGGA-CCCCTGG---GGAGGTCAGCTGCTGTGCAGATCCATGTGTGCACTACATGTCCC----------------------------------------------------------------------------------------------------GGGGTCTTCTGGCCC-AGAGGTCCCAGGTCCAGCTGGGGCTTTTTTCTTGAAGGAGACTGAGGGCAGGACTGA----GGACC i canFam3.chr9 C 0 C 0 e mm10.chr11 75832540 635 + 122082543 I a score=619693.000000 s hg38.chr17_GL383563v3_alt 160205 216 + 375691 TGCGCAGTTTTCTCTGGCTTCAGTTTAAGGAGAACCCTCACCCCCGCCACAGGATGATCCTGGGCCAACcagggctgggcccagcaggtgcagggcagggTGGGA---GCCCAGGATTCtcccctcactctctctctgtgccttggtttctacacccatcaaat-gggacaataagcctcccagccACTCTGCCAAGAGAATGAAAGTTCGCCCCAGGGG s panTro4.chr17 154761 216 + 82630442 TGCGCAGTTTTCTCTGGCTTCAGTTTAAGGAGAACCCTCACCCCCGCCACAGGATGATCCTGGGCCAACCAGGGCTGGGCCCAGCAGGTGCAGGGCAGGGTGGGA---GCCCAGGATTCTCCCCtcactctctctctgtgccttggtttctacacccatcaaat-gggacaataagcctcccagccACTCTGCCAACAGAATGAAAGTTCGCCCCAGGGG i panTro4.chr17 I 296 C 0 s ponAbe2.chr17 50989 217 + 73212453 TGCGCAGTTTTCTCTGGCTTCAGTTTAAGGAGAACTCTCACCCCCACCACAGGATGATCCTGAGCCAACCAGGGCTGGGCCCAGCAGGTGCAGGGCAGGGTGGGA---GCCCAGGATTCTCCCCtcactctctctctgtgccttggtttctacacccatcaaatggggacaataagcctcccagccACTCTGCCAACAGAATGAAAGTTCGCCCCAGGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115227 215 - 81552678 TGTGCAGTTTTCTCTGGTTTCAGTTTAAGGAGAACCCCCACCCCCGCCACAGGATGATCCTgggccagccagggctgggcccagcaggtgcagggcagggTGGGA---GCCCAGGATTCTGCCCTCACTCTctctctgtgccttggtttctacacccatcaaat--ggacaataaGCCTCCCAGCCACTCTGCCAACAGAATGAAAGTTTGCCCCAGGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 80542 211 + 80904711 TGCGCAGTTCTCTCTGGCTTTAGTTTAAGAAG-TTTCCCACCCCCGCCACAGGATGTTCCCGGGCCAGCCAGGACTGGGTCCAG-AGGCACAGGGCGGGGTGGGG---GCCCACGATTCTCCC----CGCGctctctgtgccttggtttctacacccatcaaatgggggcaataagcctcccagccACTCTGCCAACAGAACGAAGGCTCGGCCCAGAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 81321 211 + 80997621 TGCGCAGTTCTCTCTGGCTTTAGTTTAAGAAG-TTTCCCACCCCCGCCACAGGATGTTCCCGGGCCAGCCAGGACTGGGTCCAG-AGGCACAGGGCGGGGTGGGG---GCCCACGATTCTCCC----CGCGctctctgtgccttggtttctacacccatcaaatggggacaataagcctcccagccACTCTGCCAACAGAACGAAGGCTCGGCCCAGAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88141 213 + 74645514 TGCGCAGTTCTCTCTGGCTTTAGTTTAAGAAG-CCTCCCACCCCCGCCACAGGATGTTCCCGGGCCAGCCAGGACTGGGTCCAG-AGGCACAGGGCAGGGTGGGA---GCCCACGATTCTCCC--GGCactctctctgtgccttggtttctacACCCATCAAATGGGGACAATAAGCCTCCCAGCCACTCTGCCAACAGAACGAAGGTTCGGCCCAGAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 81941 212 + 75148670 TGCGCAGTTCTCTCTGGCTTTAGTTTAAG-AG-TCTCCCACCCCCGCCACAGGAAGTTCCCGGGCCAGCCAGGACTGGGTCCAG-AGGCACAGGGCAGGGTGGGA---GCCCACGATTCTCCC--CGCACTctctctgtgccttggtttctacacccatcaaatggggacaataagcctcccagccACTCTGCCAACAGAACGAAGGTTCGGCCCAGAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 894976 215 - 1291538 TGCACAGCTTTCTCTGGCCTCAGTGTAAGGAGGACCCCCTTCCCTGTCACAGGATGGTCCTGGGCCGGCCAGGGCTGGGGCCAGCAGGTACAGGGCAGAGTGGGA---TCCCAGGATTCTCCC--ctcactctctccatgccttggtttctccgcccatcagatggggacgataaGCCTCCCAGCCACTCTGCCAAAAGAAGGCAAGTTTACCCCAGAGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15654274 167 - 61074082 ------------------CTCAGCCTG---------CCCACCCCCATTGCACGATGATCCCAGGTTGGTCAGG--------TAG-GGGCAGTGGGCCTGGTGGGATAGAGCCTGGGTTCCCAC-----------------ccttagtttccatacccatcaaatggggataataaGCTTTCCATCTACTGCTCCAACAGAATGCAAGTGGCCCTTAGGGG i canFam3.chr9 C 0 I 101 e mm10.chr11 75832540 635 + 122082543 I a score=14490.000000 s hg38.chr17_GL383563v3_alt 160421 4 + 375691 AGCC s panTro4.chr17 154977 4 + 82630442 AGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51206 4 + 73212453 AGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115442 4 - 81552678 AGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 80753 4 + 80904711 AGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 81532 4 + 80997621 AGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88354 4 + 74645514 AGCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82153 4 + 75148670 AGCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 895191 4 - 1291538 TGCC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15654542 4 - 61074082 AGCC i canFam3.chr9 I 101 I 175 e mm10.chr11 75832540 635 + 122082543 I a score=7514.000000 s hg38.chr17_GL383563v3_alt 160425 4 + 375691 CGAC s panTro4.chr17 154981 4 + 82630442 CGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51210 4 + 73212453 CAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115446 4 - 81552678 TGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 80757 3 + 80904711 -GGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 81536 3 + 80997621 -GGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88358 3 + 74645514 -GGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82157 3 + 75148670 -AGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 895195 4 - 1291538 AGGC i calJac3.chrUn_GL286409 C 0 I 268 s canFam3.chr9 15654721 4 - 61074082 TGAC i canFam3.chr9 I 175 C 0 e mm10.chr11 75832540 635 + 122082543 I a score=56592.000000 s hg38.chr17_GL383563v3_alt 160429 20 + 375691 ACGTTTTATGTAGCAGAGGA s panTro4.chr17 154985 20 + 82630442 AAGTTTTATGTAGCAGAGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51214 20 + 73212453 ACATTTTATGTAGCAGAGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115450 20 - 81552678 ATGTTTTATGCAGGAGAGGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 80760 20 + 80904711 ACATTTTATACAGCGGAGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 81539 20 + 80997621 ACGTTTTACACAGCGGAGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88361 20 + 74645514 ACGTTTTACACAGCGGAGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82160 20 + 75148670 ACGTTCTATACAGCGGAGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 895467 20 - 1291538 ATGCTTTATAATGCAGGGGA i calJac3.chrUn_GL286409 I 268 C 0 s canFam3.chr9 15654725 20 - 61074082 ATGTTTCACAAAGCAGAGGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75832540 635 + 122082543 I a score=1549880.000000 s hg38.chr17_GL383563v3_alt 160449 454 + 375691 TGGT---AACCACTGCTGTGATTACCGAGAGT----GGCTA-GGGATggctaccattatcattctgggtccctctctctgttccttgcaggcagggatggggtctggctcacc-t-tgttccccc---------gcacagtgcttggtaaacaacaTGCAGAATTGAAAATGTCACCGACCAGTCTCCAGTTTGGGAGGAGTGAGTGAGAGAGGACACGG---CCGCGGGGGCAGGAGAGGGGAGAAGGCAGCA--------------GTTGGGTACTCACCGGGGCCCTTCGGGTCAGCCCGGGGCGGGGTCCCCCTG-GCGGGTCAGCAGAGCCTGTCCCCGTCTCACCACTGGCCAGGCTGCTCTGGCACCCAGAGAGGTGGCCCGGCGGGTGGGTGAACCCCATCCTGGGGGCCTCCACGCTGCCACCTGT-GGGAAATCACGTGTGGGCCCCGTGGATCTCAAACCGAGACGGGG-TGATCTCAGTCC s panTro4.chr17 155005 448 + 82630442 TGGT---AACCACTGCTGTGATTATCGAGAGT----GGCTA-GGGATGGCTACCATTAT---TCTGGGTCCCTCTCTCTGTTCCTTGCAGGCAGGGATGGGGTCTGGCTCACC-T-TGTTCCCCC---------GCACAGTGCTTGGTAAACAACATGCAGAACTGAAAATGTCACCGACCAGTCTCCAGTTTGGCAGGAGTGAGTGAGAGAGGACACGG---CCGCGGGGGCAGGAGAGGGGAGAAGGCAGCA--------------GTTGGGTACTCACCGGGGCCCTTCGGGTCGGCCCGGGTCGGGGTCCCCCTG-GCGGGTCGGCAGAGCCTGTCCCCGTCTCAC---TGGCCAGGCTGCTCTGGCACCCAGAGAGGTGGCCCGGCGGGTGGGTGAACCCCATCCTGGGGGCCTCCACGCTGCCACCTGT-GGGAAATCACGTGTGGGCCCCATGGATCTCAAACCAAGACGGGG-TGATCTCAGTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51234 447 + 73212453 TGGT---AACCACTGCTGTGATTATCGAGAGT----AGCTA-GGGATGGTTACCAGTCCCATTCTGGGTCCGTCTCTCTgttccttgcgggcagggatggggtctggctcacc-t-tgttccccc---------gcacagtgcttggta---aacatgcaGAATTGAAAATGTCACCGACCAGTCTCCAGTTTGGGAGGAGTGAATGAGACA-GACACGG---CCGTGGGGGCAGGAGAGGGGAGAAGGCAGCA--------------GCTGGGTACTCACCGGGGCCCTTCGGGTCAGCACAGGGCAGGGTCCCCCCC-GCGGGTCGGCGGAGCCCGTCCCCGTCTCAC---CGGCCAGGCTGCTCTGGCTCCCGGAGAGGTGGCCCAGCGGGTGGGTGAACCCCATCCTGGGGGCCTCCACGCTGCCACCTGT-GGGAAATCACGTGTGGGCCCCGTGGATCTCCAACCGAGATGGGG-TGATCTCAGTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115470 448 - 81552678 GGGT---AAGCACTGCTGTGATTACCCAGAGT----GGCTA-GGGATGGTTACCATGATCATTCTGGGTCCCTCTCTCTGTTCCTTGCAGGCAGGGATGGGGTCTGGCTCACC-T-TGTTCCCCT---------GCACAGTGCTTGGTA---AACATGCAGAATTGAAAATGTCACCGACCAGTCTCCCGTTTGGGAGGAGTGAGTGAGGGAGGACACGG---CCACGGGGGCAGGAGAGGGGAGAAGGCAGCA--------------GTTGGGTACTCACCGGGGCCCTTCGGGTCGGCCCGGGGCGGGGTCCCCCCC-GCGGGTCGGCAGAGCCTGTCCCCGTCTCAC---TGGCCAGGCTGCTCTGGCTCCCAGAGAGGTGGCCCGGCGGGCGGGTGAACCCCATCCTGGGGGCCTCCACGCTGCCACCTGT-GGGAAATCACGTGTGGGCCCTGTGGATCTCAAACCGAGATGGGG-TGATCTCAGCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 80780 447 + 80904711 CGGT---GACCACTGCTGTAATTAGTGAGAGC----GGCTA-GGGATGGTTACCGTTCTCATTCCGGGCCCCTCTCTCTGTTCCTTGCAGGCAGGGACGGGGTCTGGCTCACC-T-CGTTCCCC----------GCACAGTGCTTGGTA---AACATGCAGAATTGAAAATGTCACCAACCAGTCTCCAGTTTGGAAGGAGTGAGTGAGAGAGGACGCGG---CCGCGGGGGCAGGAGAGGGGAGAAGACAGCA--------------GCTGGATACTCACCGGGGCCCTTCGGGTCGGCCTGGGGTAGGGTCCCCCCCTGCGGGTCGGCAGAGCCTGTCCCCATCTCAC---TGGCCAGGCTGCTCTGGCTCCCGGAGAGGTGGCCCAGCGGGTGCGTGAACCCCATCCTGGGGGCCTCCACACTGCCACCTGT-GGGAGACCACGTGTGGG-CCTGTGGCTCTCACACTGAGACAGGG-TGGTCTCAGTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 81559 447 + 80997621 CGGT---GACCACTGCTGTAATTAGTGAGAGC----GGCTA-GGGATGGTTACCGTTCTCATTCCGGGCCCCTCTCTCTGTTCCTTGCAGGCAGGGACGGGGTCTGGCTCACC-T-CGTTCCCC----------GCACAGTGCTTGGTA---AACATGCAGAATTGAAAATGTCACCAACCAGTCTCCAGTTTGGAAGGAGTGAGTGAGAGAGGACGCGG---CCGCGGGGGCAGGAGAGGGGAGAAGACAGCA--------------GCTGGATACTCACCGGGGCCCTTCGGGTCGGCCTGGGGTAGGGTCCCCCCCTGCGGGTCGGCAGAGCCTGTCCCCATCTCAC---TGGCCAGGCTGCTCTGGCTCCCGGAGAGGTGGCCCGGCGGGTGCGTGAACCCCATCCTGGGGGCCTCCACACTGCCACCTGT-GGGAGACCACGTGTGGG-CCTGTGGCTCTCACACTGAGACAGGG-TGGTCTCAGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88381 447 + 74645514 TGGT---GACCACTGCTGTAATTAGTGAGAGC----GGCCA-GGGATGGTTACCGTTCTCATTCCGGGTCCCTCTCTCTGTTCCTTGCAGGCAGGGACGGGGTCTGGCTCACC-T-GGTTCCCC----------GCACAGTGCTTGGTA---AACATGCAGAATTGAAAATGTCACCAACCAGTCTCCAGTTTGGAAGGAGTGAGTGAGAGAGGACGCAG---CAGCgggggcaggagaggggagaagaCAGCA--------------GCTGGATACTCACCGGGGCCCTTCGGGGCGGCCTGGGGTAGGGTCCCCCACTGTGGGTCGGCAGAGCCTGTCCCCATCTCAC---CGGCCAGGCTGCTCTGGCTCCCGGAGAGGTGGCCCGGCGGGTACGTGAACCCCATCCTGGGGGCCTCCACACTGCCACCTGT-GGGAGACCACGTGTGGG-CCTGTGGATCTCAAACTGAGACAGGG-TGGTCTCAGTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82180 447 + 75148670 TGGT---GACCACTGCTGTAATTAGTGAGAGT----GGCTA-CGGATGGTTACCATTCTCATTCCGGGCCCCTCTCTCTGTTCCTTGCAGGCAGGGACGGGGTCTGGCTCCCC-T-CGTTCCCC----------ACACAGTGCTTGGTA---AACATGCAGAATTGAAAATGTCACCAACCAGTCTCCAGTTTGGAAGGAGTGAGTGAGAGAGGACGCGG---CCGCGGGGGCAGGAGAGGGGAGAAGACAGCA--------------GCTGGATACTCACCGGGGCCCTTCGGGTCGGCCTGGGGTAGGGTCCCGCCCTGCGGGTCGGCAGAGCCTGTCCCCATCTCAC---TGGCCAGGCTGCTCTGGCTCCCGGAGAGGTGGCCCGGCGGGTGCGTGAACCCCATCCTGGGGGCCTCCACACTGCCACCTGT-GGGAGATCACGTGTGGG-CCTGTGGATCTCAAACTGAGACAGGG-TGGTCTCAGTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 895487 442 - 1291538 TGGT---AACCACTGCTGGAATTACC--AAGT----GGCTACAGAATCACTACCATGACCAATTTGGGCCCCTCTCTCTGTTCCTGGCAGGCCAGGCTGGGGTCTGGTTCACC-T-GGTCCCCA----------GCACAGTGCTCAGTA---AACATAAAGCACTGACCATGTCACCCACCACCCTCCAGTTTGGGAGGAGTGAGTGAGAAAGGACGTGG---CCGGGGGGGCAGGAGAGGGGAGAAGGCAGCA--------------GCCGGGTACTCACCAGGGCCCTTCAGATCAGCCCGGGGCGGGGTGCCCT---GTGGGTCAGCAGAGCCTGTCCCGGTCTCAC---TGGCCAGGCTGCTCTGGCTCACGGAGAGGTGGCTGGGCGGGCGGATGAGCCCCATCCTGGGGGCATCCTCGCTGCCACCTGT-GGGAAATCAC--GTGGGCCCCGTGGGTCTCAAACTGAGATGGGG-TGATCACAGTCG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75833175 424 + 122082543 TGGG---AACTGC--CTGCGACTGTTAGGAGTCAGGGAAGA-CGGACGAGTGATGGTACCATTCTGAGTCC----CTCTGGCCAAAGCTGGCAGAGAT-GGGTCTGGCTGACCTT-TGCTCCCCAC--TTTCTGGCACGGAGCTCAGTA---AATATGAAGAATTGAAAATGTCACCGGCCACT----------AGGGGAGGGAGGATGGGATGAAACTG---CTGCTGGACAAACAGA---GCCAAGGCAG----------------------TACTCACCGGGTACCCTGGGCTCAGGCTGGGCTGGGGTGCCTCCCTGTGGCTCTGTAGCACCTGTCCCAGCCTCAC---TGCCTAGGCTGCTCTGACTGCCCGAGAGATGGCTGGGTGGACGGGCAGGCCCCAGCCTGGGTGACTCCATGCTGGCACCTGCAAGGGGACCATTCGTGAA---TGTGGAT-------GGAGATGCAT-TGAGCTCAGCCC i mm10.chr11 I 635 C 0 s canFam3.chr9 15654745 474 - 61074082 TGGTAAGAACCATTGTTAGGATTACTAAGAAT----GGATA-GGGGTGGTTCCCCTTATTATTTTGGGTCCCTTTCTCTgttcattgcaggcaggggtggggtctggctcacc-tctgttccccccagtgcctggcacagcgctcaata---aaCA--GAGAATTGCAAATATCATCTAGCACTCTCCAGTTTGGGTGGATTGAGTAAGGAAGGAGGAGGAGCATGGGGAAGCAGAAGA-GGGAGAGGCCGGTAGGTTAGAAGGTATGGCTTGGTACTCACTGGGGCCCTTTGGGTCTGGCCAGGATGGGGTGCCCAGCTGTGGGTCTGCAGAGCCCATTCCAGTCTCAC---TTGCCAGGCTGCTCTGGCTTCCTGAGAGGTGGCTGGGCCGGCGGGCAGGCCCCATCCTGGGGGACTCCACACTGCCACCTGC-AAGAG---ACATGGGTGCTCTTTGGGCCTTGAACAGAGACAAGGATGATCTCAGACT i canFam3.chr9 C 0 I 231 a score=82757.000000 s hg38.chr17_GL383563v3_alt 160903 36 + 375691 AGT---------------TCCTCGTTTGGAAC--T-CTAGATCTCTATGGGATG s panTro4.chr17 155453 36 + 82630442 AGT---------------TCCTCGTTTGGAAC--T-CTAGATCTCTATGGGATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51681 38 + 73212453 AGT---------------TCCTCATTTAGAACTGT-GTAGGTCTCTGTGGGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115918 38 - 81552678 AGT---------------TCCTCATTTGGAACTGT-GTAGGTCTCTATGGGATG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81227 39 + 80904711 AGT---------------TCCTCATTCGGAACTGTGGTGGGTCTCTATGGGACG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82006 39 + 80997621 AGT---------------TCCTCGTTCGGAACTGTGGTGGGTCTCTATGGGACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88828 39 + 74645514 AGT---------------TCCTCGTTCGGAACTGTGGTGGGTCTCCATGGGAcg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82627 39 + 75148670 AGT---------------TCCTTGTTCGGAACTGTGGTGGGTCTCTACGGGACG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 895929 39 - 1291538 AGG---------------TCCTCGTTGGGAACCATGGTGGGTCTCTGTGGGATG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75833599 53 + 122082543 AGCAAAAAGCTGGCCAAATTGTC-TCTGGAATTGTGGGCGGTAAATGTGGACTG i mm10.chr11 C 0 C 0 e canFam3.chr9 15655219 231 - 61074082 I a score=42397.000000 s hg38.chr17_GL383563v3_alt 160939 24 + 375691 TCTGCCCCCC--ACCCCACCCACATG s panTro4.chr17 155489 24 + 82630442 TCTGCCCCCC--ACCCCACCCACATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51719 24 + 73212453 TCTGCTCCCC--ACCCCACCCACATG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115956 24 - 81552678 TCTGCCCCCA--ACCCCACCCACATG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81266 23 + 80904711 TCTGCCCCC---ACCCCACCCAAACG i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 82666 23 + 75148670 TCTGCCCCC---ACCCCACCCAAACG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 895968 24 - 1291538 TTTGCCCCCC--ACCCCACCCACATG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75833652 26 + 122082543 TCTGCCTAGTGGCCCCCACCCACACA i mm10.chr11 C 0 C 0 e canFam3.chr9 15655219 231 - 61074082 I e papAnu2.chr16 88867 0 + 74645514 C e macFas5.chr16 82045 0 + 80997621 C a score=11061.000000 s hg38.chr17_GL383563v3_alt 160963 6 + 375691 GCTGCC s panTro4.chr17 155513 6 + 82630442 GCTGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51743 6 + 73212453 GCTGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115980 6 - 81552678 GCTGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81289 6 + 80904711 GCTGCC i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 82689 6 + 75148670 GCTGCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75833678 6 + 122082543 CCTGCC i mm10.chr11 C 0 I 417 e canFam3.chr9 15655219 231 - 61074082 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e papAnu2.chr16 88867 0 + 74645514 C e macFas5.chr16 82045 0 + 80997621 C a score=9624.000000 s hg38.chr17_GL383563v3_alt 160969 12 + 375691 AGGCTCTGGCCT s panTro4.chr17 155519 12 + 82630442 AGGCTCTGGCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 51749 12 + 73212453 AGGCTCTGGCCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 81295 12 + 80904711 AGGCTCTGGCAT i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 82695 12 + 75148670 AGGCTCTGGCAT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e canFam3.chr9 15655219 231 - 61074082 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e papAnu2.chr16 88867 0 + 74645514 C e macFas5.chr16 82045 0 + 80997621 C e nomLeu3.chr19 115986 0 - 81552678 C a score=23385.000000 s hg38.chr17_GL383563v3_alt 160981 88 + 375691 GACCTCACCCACATGGCTGCCGGGCTCTGGCCTGACCCCACCCACATGGCTGCCGGGCTCTGGCCTGACCTCACCCACATGGCTGCCG s panTro4.chr17 155531 88 + 82630442 AACCCCACCCACATGGCTGCCAGGCTCTGGCCTGACCTCACCCACATGGCTGCCGGGCTCTGGCCTGACCTCACCCACATGGCTGCCG i panTro4.chr17 C 0 T 66 s ponAbe2.chr17 51761 88 + 73212453 GACCCCACCCACATGGCTGCCAGGCTCTGGCCCGACCTCACTCACATGGCTGCCAGGCTCTGGCCCGACCTCACCCACATGGCTGCCA i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e canFam3.chr9 15655219 231 - 61074082 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e papAnu2.chr16 88867 0 + 74645514 C e rheMac3.chr16 81307 0 + 80904711 C e macFas5.chr16 82045 0 + 80997621 C e nomLeu3.chr19 115986 0 - 81552678 C a score=23493.000000 s hg38.chr17_GL383563v3_alt 161069 87 + 375691 GGCTCTGGCCTGACCCCACCCACATGGCTGCCGGGCTCTGGCCTGACCTCACCCACATGGCTGCCGGGCTCTGGCCTGACCCCACCC s panTro4.chr17 155553 87 + 82630442 GGCTCTGGCCTGACCTCACCCACATGGCTGCCGGGCTCTGGCCTGACCTCACCCACATGGCTGCCGGGCTCTGGCCCGACCCCACCC i panTro4.chr17 T 66 T 66 s ponAbe2.chr17 51849 87 + 73212453 GGCTCTGGCCCGACCCCACCCACATGGCTGCCAGGCTCTGGCCCGACCTCACCCACATGGCTGCCAGGCTCTCGCCCGACCCCACCC i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e canFam3.chr9 15655219 231 - 61074082 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e papAnu2.chr16 88867 0 + 74645514 C e rheMac3.chr16 81307 0 + 80904711 C e macFas5.chr16 82045 0 + 80997621 C e nomLeu3.chr19 115986 0 - 81552678 C a score=10474.000000 s hg38.chr17_GL383563v3_alt 161156 48 + 375691 ACATGGCTGCCGGGCTCTGGCCTGACCT---------------------------------CACCCACATGGCTGCCGGGC s panTro4.chr17 155574 48 + 82630442 ACATGGCTGCCGGGCTCTGGCCTGACCT---------------------------------CACCCACATGGCTGCCGGGC i panTro4.chr17 T 66 C 0 s ponAbe2.chr17 51936 81 + 73212453 ACATGGCTGCCAGGCTCTGGCCCGACCTCATCCACATGGCTGCCAGGCTCTCGCACGACCCCACCCACATGGCTGCCAGGC i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e canFam3.chr9 15655219 231 - 61074082 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e papAnu2.chr16 88867 0 + 74645514 C e rheMac3.chr16 81307 0 + 80904711 C e macFas5.chr16 82045 0 + 80997621 C e nomLeu3.chr19 115986 0 - 81552678 C a score=7811.000000 s hg38.chr17_GL383563v3_alt 161204 13 + 375691 TCTGGCCTGACCT s panTro4.chr17 155622 13 + 82630442 TCTGGCCCGACCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52017 13 + 73212453 TCTCGCCCGACCT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 82045 13 + 80997621 TCTGCCCCCACCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88867 13 + 74645514 tctgcccccaccc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e canFam3.chr9 15655219 231 - 61074082 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e rheMac3.chr16 81307 0 + 80904711 C e nomLeu3.chr19 115986 0 - 81552678 C a score=6340.000000 s hg38.chr17_GL383563v3_alt 161217 5 + 375691 CACCC s panTro4.chr17 155635 5 + 82630442 CACCC i panTro4.chr17 C 0 T 21 s ponAbe2.chr17 52030 5 + 73212453 CACCC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 82058 5 + 80997621 CACCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88880 5 + 74645514 caccc i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15655450 5 - 61074082 CCCCC i canFam3.chr9 I 231 C 0 e mm10.chr11 75833684 417 + 122082543 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e rheMac3.chr16 81307 0 + 80904711 C e nomLeu3.chr19 115986 0 - 81552678 C a score=6991.000000 s hg38.chr17_GL383563v3_alt 161222 11 + 375691 ACATGGCTGCA s ponAbe2.chr17 52035 11 + 73212453 ACATGGCTGCC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 82063 11 + 80997621 AAACGGCTGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88885 11 + 74645514 aaatGGCTGCC i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15655455 11 - 61074082 ACGTGGTTGCC i canFam3.chr9 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e rheMac3.chr16 81307 0 + 80904711 C e nomLeu3.chr19 115986 0 - 81552678 C e panTro4.chr17 155640 21 + 82630442 T a score=1365.000000 s hg38.chr17_GL383563v3_alt 161233 1 + 375691 A s ponAbe2.chr17 52046 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115986 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 82074 1 + 80997621 A i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88896 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15655466 1 - 61074082 A i canFam3.chr9 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e rheMac3.chr16 81307 0 + 80904711 C e panTro4.chr17 155640 21 + 82630442 T a score=12630.000000 s hg38.chr17_GL383563v3_alt 161234 11 + 375691 GGCTCTGGCCC s panTro4.chr17 155619 11 + 82630442 GGCTCTGGCCC i panTro4.chr17 T 21 C 0 s ponAbe2.chr17 52047 11 + 73212453 GGCTCTCGCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115987 11 - 81552678 GGCTCTGGCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 82075 11 + 80997621 GGCTCTGGCAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88897 11 + 74645514 GGCTCTGGCAT i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15655467 11 - 61074082 TGTTCTAGTGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C e chlSab2.chr16 82707 0 + 75148670 C e rheMac3.chr16 81307 0 + 80904711 C a score=3600.000000 s hg38.chr17_GL383563v3_alt 161245 1 + 375691 G s panTro4.chr17 155630 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52058 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115998 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81307 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82086 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88908 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82707 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15655478 1 - 61074082 G i canFam3.chr9 C 0 C 0 e mm10.chr11 75833684 417 + 122082543 I e calJac3.chrUn_GL286409 895992 0 - 1291538 C a score=387147.000000 s hg38.chr17_GL383563v3_alt 161246 144 + 375691 ACCCCACCCTCTGGCTGTTGCTGGTGGGTCCAAGA-----------------ACGGGCC----TGCAGGTCTTTTCACTAAGTCACAGATCACCAACATGAAAGTCCACAATTA-------------------TCACAGAATGGGGGTGG----------GGGTGGGGGATATATATTT-------TGGTTAACCTAATGA s panTro4.chr17 155631 144 + 82630442 ACCCCACCCTCTGGCTGTTGCTGGTGGGTCCAAGA-----------------ACGGGCC----TGCAGGTCTTTTCACTAAGTCACAGATCACCAACATGAAAGTCCACAGTTA-------------------TCACAGAATGGGGGTGG----------GGGTGGGGGATATATATTT-------TGGTTAACCTAATGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52059 142 + 73212453 ACCCCACCCTCTGGCCGTTGCTGGTGGGTCCAAGA-----------------ACGCGCC----TGCAGGTTGTTTCACTAAGTCACAGATCACCAACATGAAAGTCCACAATTA-------------------TCACAGAATGGGGGTGG----------GGGTGGGGG--ATATATTT-------TGGTTAACCTAATGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 115999 150 - 81552678 ACCCCACCCTCTGGCCGTTGCTGTTGGGTCCAAGA-----------------ACGGGCC----TGCAGGTCTTTTCACTAAGTCACACGTCACCAACAGGAAAGT-CACAATTA-------------------CCACAGAATGGGGTTGG----------GGGTGGGGGATATATATTTCGGTTAACGGTTAACCTAGTGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81308 140 + 80904711 ACCCCACCCTCTGACCGCTGCTGTTGGGTCCAAGA-----------------ACGGGCC----TGCAGGTCGTTTCACTAAGTCACACGTCACCAACTTGAAAATCCACAATGA-------------------TCATGGAATGGGCAGGG--------------GGGTGATATGTATTT-------CGGTTAACCTCATAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82087 140 + 80997621 ACCCCACCCTCTGACCGCTGCTGTTGGGTCCAAGA-----------------ACGGGCC----TGCAGGTCGTTTCACTAAGTCACACGTCACCAACTTGAAAATCCACAATGA-------------------TCATGGAATGGGCAGGG--------------GGGTGATATGTATTT-------CGGTTAACCTCATAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 88909 139 + 74645514 ACCCCACCCTCTGACCGCTGCTGTTGGGTCCAAGA-----------------ACGGGCC----TGCAGGTCGTTTCACTAAGTCACACGTCACCAACTTGAAAATCCACAATGA-------------------TCACGGAATGGGT-GGG--------------GGTTGATATGTATTT-------CGGTTAACCAAATAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82708 154 + 75148670 ACCCCACCCTCTGACCGCTGCTGTAGGGTCCAAGA-----------------ACGGGCC----TGCAGGTCGTTTCACTAAGTCACACGTCACCAACTTGAAAATCCACAATGA-------------------TCGCGGAATggggtgggggtgggggtggggtgggggATATGTATTT-------CGGTTAACCTAATAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 895992 147 - 1291538 ACCCCACCCTCTGACCACTGCTACCGGGTCCAAGA-----------------ACAGGCCTGTATGTAGGTCGTTTCATTAAGTCACAAGTCACCAACATGAAAATCCACAATGA-------------------TCACAGACTGGGGATAA----------GGGTGGG-GATGCATATTT-------TGGTTAACCTAATGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15655479 174 - 61074082 ATCTTCCTCTCTGGCCAGTGCTAATTGGTTCAGGATATATAAAGGCCACTACATAGGTC----CCCAGATTGGTTCAGTAAGGAACAAGTCATCAACATGAAAACTTACAGTGAGGAGGAGTTTTTCTTGCCTTTATAGAATGAGGGGGA----------------AAGGTATATATCT-------CCATTAACCCAATGA i canFam3.chr9 C 0 I 646 e mm10.chr11 75833684 417 + 122082543 I a score=396738.000000 s hg38.chr17_GL383563v3_alt 161390 137 + 375691 GAGA----TGTTGACTGCTGCCTTAACTCACTAAAGGGTCTTCACTCAAACATGGTTTCTGGTCTTTGCCTGGCCAAGAGAGCAGACGTGGAGCCTGC--TACTTTGCT-GAACTTCT-CTTGTCTCCCAGTCCTGCTTGGTCAG s panTro4.chr17 155775 141 + 82630442 GAGAGAGATGTTGACTGCTGCCTTAACTCACTAAAGGGTCTTCACTCAAACATGGTTTCTGGTCTTTGCCTGGCCAAGAGAGCAGACGTGGAGCCTGC--TACTTCGCT-GACCTTCT-CTTGTCTCCCAGTCCTGCTTGGTCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52201 141 + 73212453 GAGAGAGGTGTTGACTGCTGCCTTAACTCACTAAAGGGTCTTCACTCAAACACGGTTTCTGGTCCTTGCCTGGCCAAGAGAGCAGACGTGGAGCCTGC--TACTTCGCT-GACCTTTT-CTTGTCTCCCAGTCCTGCTTGGTCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116149 141 - 81552678 GAGAGAGATGTTGACTGCTGCGTTAACTCACTAAAGGGTCTTCGCTCAAACATGGTTTCTGGTCCTTGCCTGGCCAAGAGAGCAGACGCGGAGCCTGC--TACTTCGCT-GACCTTCT-CCTGTCTCCCAGTCCCGCTTGGTCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81448 130 + 80904711 GAGAGAGATGTTGACTGCTGCCTTAACTCACGAAAGGGTCTTCACTCAAACATGGTTTCTGGTCCTGGCCTGGCCAAGAGAGCAGACGTGGAGCCCAC--TGCTTCAC-------------TGTCTCCCAGTCCTGCTTGGTTAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82227 130 + 80997621 GAGAGAGATGTTGACTGCTGCCTTAACTCACTAAAGGGTCTTCACTCAAACATGGTTTCTGGTCCTGGCCTGGCCAAGAGAGCAGACGTGGAGCCCGC--TGCTTCAC-------------TGTCTCCCAGTCCTGCTTGGTTAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89048 130 + 74645514 GAGAGAGATGTTGACTGCTGCCTTAACTCACTAAAGGGTCTTCACTCAAACATGGTTTCTGGTCCTGGCCTGGCCAAGAGAGCAGACGTGGAGCCCGC--TGCTTCGC-------------TGTCTCCCAGTCCTGCTTGGTTAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82862 130 + 75148670 GAGAGAGGTGTTGACTGCTGCCTTAACTCACTAAAGGGTCTTCACTCAAACATGGTTTCTGGTCCTGGCCTGGCCAAGAGAGCAGACGTGGAGCCCGC--TGCTTCGC-------------TGTCTCCCAGTCCTGCTTGGTTAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896139 139 - 1291538 GAGAGA--TGTTGATGGCTGCCTTAACTCACTAAACGATCCTCACACAAACCTGGTTTTTGGTCCTTGCCTGGCCAAGAGAGAAGACGTGGAGCCCAC--TACTTTGCT-GACCTTTT-CCTGACTCCCAGTCCTATGTGGTCAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15656299 137 - 61074082 -----GGTTATTCATTGCTGCCTTTATTAACTAAGGAAACTTCCTTCAGATATGGTTGCTA--CCTTG-CTGTCTGGGAGCACAGAGGCGGGACCTGTAATACTGCACTCCATCTTCTCCCTGTCTCCCAGACCACCCTGGTCAT i canFam3.chr9 I 646 C 0 e mm10.chr11 75833684 417 + 122082543 I a score=398452.000000 s hg38.chr17_GL383563v3_alt 161527 123 + 375691 AGCTGAGGGTGGGTGTGGAGCGAGGGGACAAGAGCC--CATGGTGGGAGGAGGAGGGGAGTATAAAGCCTGCCCTGGAAACCGAGGCTGGCAGGTAAGTTTCCTTTATACTCTTCTAAATTTTCT s panTro4.chr17 155916 123 + 82630442 AGCTGAGGGTGGGTGTGGAGCCAGGGGACAAGAGCC--CATGGTGGGAGGAGGAGGGGAGTATAAAGCCTGCCCTGGAAACCGAGGCTGGCAGGTAAGTTTCCTTTATACTCTTCTAAATTTTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52342 123 + 73212453 AGCTGAGGGTGGGTGTGGAGAGAGGGGACAAGAGCC--TGCGGTGGGAGGAGGAGGGGAGTATAAAGCCTGCCCTGGAAACCGAGGCTGGCAGGTAAGTTTCCTTTATGCTCTTCTAAATTTTCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116290 121 - 81552678 AGCTGAGGGTGGGTGTGGAGCCAGGGGACAAGAGCC--CGCGGTGGGAGAAGGAGGGGAGTATAAAGCCTGCCCTGGAAACCGAGGCTGGCAGGT--GTCTCCTTTATACTCTTCTAAATTTTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81578 120 + 80904711 AGCTGAGGGTGGGTGTGGAGCGAGGGCACAAGAGCC--CGAGGTGGGAGGCGGAGGGGAGTATAAAGCCTGCCCTGGAAACGGAGGCCGGCAGGTAAGTTTCCTTTATACTCTTCTAAA---TCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82357 120 + 80997621 AGCTGAGGGTGGGTGTGGAGCGAGGGCACAAGAGCC--CGAGGTGGGAGGCGGAGGGGAGTATAAAGCCTGCCCTGGAAACGGAGGCCGGCAGGTAAGTTTCCTTTATACTCTTCTAAA---TCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89178 120 + 74645514 AGCTGAGGGTGGGTGTGGAGCGAGGGCACAAGAGCC--CGCGGTGGGAGGCAGAAGGGAGTATAAAGCCTGCCCTGGAAACCGAGGCCGGCAGGTAAGTTTCCTTTATACTCTTCTAAA---TCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 82992 120 + 75148670 AGCTGAGGGTGGGTGTGGAGTGAGGGCATAAGAGCC--CGCGGTGGGAGGCGGAGGGGAGTATAAAGCCTGCCCTGGAAACTGAGGCCGGCAGGTAAGTTTCCTTTATACTCTTCTAAA---TCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896278 119 - 1291538 AGCTGAGGGTGGGTGTGGATCGAGGGGACCAGAGCT--CATGATGGGAGGAGG-GGTGAGTATAAAACCTGCTCTGGAAACCTAGGCTGGCAGGTAAGTTTCCTTTATACTCTTCTAAA---TCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75834101 108 + 122082543 AGCTGAGAGTTGATATGGTGGGAGGGGACTGAAGCCATCATGG-AGGAGGCAG-CGGAAGCAC----CTTGTCCT-GAAACCAAGATTGGTAGGCAATT----TGTACATTTTCCTAAG------ i mm10.chr11 I 417 C 0 s canFam3.chr9 15656436 113 - 61074082 AGCTGAGAGCTGGTGTTAGT--GGGGTTTAAGAGCT--C-----TATAAGGGGAACAGGTTATAAAACCTGCCCTGGAAACCAAGGCTGGCAAGTAGGTttccttccttcctttc---atttcct i canFam3.chr9 C 0 I 811 a score=384895.000000 s hg38.chr17_GL383563v3_alt 161650 128 + 375691 CTAGAATCTTCAGCCTGATGGAGCCT----GGGAAGTCACTG----GTCCAGGGacagttttcatctcttgcaccatctctacctgctgatattggccacttagaaaactgcactgaggaggattctgagggcaca s panTro4.chr17 156039 128 + 82630442 CTAGAATCTTCAGCCTGATGGAGCCT----GGGAAGTCACTG----GTCCGGGGacagttttcatctcttgcaccatctctacctactgatattggccacttagaaaactgcactgaggaggattctgagggcaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52465 128 + 73212453 CTAGAATCTTCAGCCTGAAGGAGCCT----GGGAAGTCACTG----GTCCGGagacagttttcatctcttgcaccatctctacctactgacattggccacttagaaaactgcactgaggaggattctgagggcaca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116411 128 - 81552678 CTAGAATCTTCAGCCTGAAGGAGCCT----AAGAAGTCACTG----GTCCGGGGacagttttcatctcttgtgccatctctacctactgatattggccacttagaaaactgcactgaggaggactctgagggcaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 81698 127 + 80904711 CTAGAATCTTCAGCCTGA-GGGGCCT----AGGAAGTCACTG----GTCCGGGGacagttttcatctcttgcaccatctctacctactgatattggccacttagaaaactgcactgaggatgattcggagggcaca i rheMac3.chr16 C 0 I 219 s macFas5.chr16 82477 127 + 80997621 CTAGAATCTTCAGCCTGA-GGGGCCT----AGGAAGTCACTG----GTCCGGGGacagttttcatctcttgcaccatctctacctactgatattggccacttagaaaactgcactgaggatgattcggagggcaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89298 127 + 74645514 CTAGAATCTTCAGCCTGA-GGGGCCT----AGGAAGTCACTG----GTCCGGGGACAGTTTTCATCTCTTGCACCATCTCTACCTACTGATATTGGCCACTTAGAAAACTGCACTGAGGATGATTCGGAGGGCACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 83112 127 + 75148670 CTAGAATCTTCAGCCTGA-GGGGCCT----AGGAAGTCACTG----GTCCGGGAGAagttttcatctcttgcaccatctctacctactgacattggccacttagaaaactgcactgaggatgattcggagggcaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896397 116 - 1291538 CTAGACTCTTCAGCCTGA----------------AGTCACTG----GTCCAGGGAAagttttcatctcttataccatctctacctactgatattggccacttggaaaactgcactgaggaggattctgagggctca i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75834209 83 + 122082543 -------------------GGAGCCTCTTGGGGATGCCGATGCCAAGTCTAGGAGTAGTTTTCAG--------------------------------CActtgggaaact--atgaaggaggattctgaaggtgca i mm10.chr11 C 0 C 0 e canFam3.chr9 15656549 811 - 61074082 I a score=62630.000000 s hg38.chr17_GL383563v3_alt 161778 19 + 375691 tcagggctctgt-ggaaaga s panTro4.chr17 156167 19 + 82630442 tcagggctctgt-ggaaaga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52593 19 + 73212453 tcagggctctgt-ggaaaga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116539 19 - 81552678 tcagggctctgt-ggaaaga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82044 19 + 80904711 tcagggctctgt-ggaaaga i rheMac3.chr16 I 219 C 0 s macFas5.chr16 82604 19 + 80997621 tcagggctctgt-ggaaaga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89425 19 + 74645514 TCAGGGCTCTGT-GGAAAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 83239 19 + 75148670 tcagggctctgt-ggaaaga i chlSab2.chr16 C 0 I 1620 s calJac3.chrUn_GL286409 896513 11 - 1291538 tcagggctctg--------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75834292 20 + 122082543 tcagggctctgtaggaaaga i mm10.chr11 C 0 C 0 e canFam3.chr9 15656549 811 - 61074082 I a score=11476.000000 s hg38.chr17_GL383563v3_alt 161797 4 + 375691 gtat s panTro4.chr17 156186 4 + 82630442 gtat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52612 4 + 73212453 gtat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116558 4 - 81552678 gtat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82063 4 + 80904711 gtat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82623 4 + 80997621 gtat i macFas5.chr16 C 0 I 267 s papAnu2.chr16 89444 4 + 74645514 GTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 84878 4 + 75148670 gtat i chlSab2.chr16 I 1620 C 0 s mm10.chr11 75834312 4 + 122082543 gcac i mm10.chr11 C 0 C 0 e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896524 0 - 1291538 C a score=262090.000000 s hg38.chr17_GL383563v3_alt 161801 78 + 375691 catgatcacctagtaatgtctgccatggtcacaggagaggggggtggt--ggtacatgtgtcaggtctttgccagctctg s panTro4.chr17 156190 78 + 82630442 catgatcacctagtaatgtctgccatggtcaccggagaggggggtggt--ggtacgtgtgccaggcctttgccagctctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52616 78 + 73212453 catgatcacctagtaaggtctgccatggtcacaggagaggggggtggt--ggtacgtgtgccaggcctttgccggctctg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116562 78 - 81552678 catgatcacctagtaatgtctgccatggtcacaggagtggggggtggt--ggtacgtgtgccaggcctttgccggctctg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82067 78 + 80904711 catgagcacctagtaatgtctgccatggtcacaggagtggagggtggt--ggtacgtgtgccaggcctttgccggctctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82894 78 + 80997621 catgagcacctagtaatgtctgccatggtcacaggagtggagggtggt--ggtacgtgtgccaggcctttgccggctctg i macFas5.chr16 I 267 C 0 s papAnu2.chr16 89448 78 + 74645514 CACGAGCACCTAGTAATGTCTGCCATGGTCACGGGAGTGGAGGGTGGT--GGTACGTGTGCCAGGCCTTTGCCGGCTCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 84882 78 + 75148670 cacgagcacctagtaatgtctgccatggtcacgggagtggagggtggt--ggtacgtgtgccaggcgtttgccagctctg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896524 76 - 1291538 --tgaccacctagtaacgcctgccatggtcatgggagtggggagtggt--gatccatgtgccaggcctctgctagctctg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75834316 79 + 122082543 cacaatcaactagtaatgtctgccatgg-cacaggatggagagatggtacagtgtgcatgccaggcatgtggcatttctg i mm10.chr11 C 0 I 326 e canFam3.chr9 15656549 811 - 61074082 I a score=148984.000000 s hg38.chr17_GL383563v3_alt 161879 44 + 375691 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA s panTro4.chr17 156268 44 + 82630442 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52694 44 + 73212453 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116640 44 - 81552678 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82145 44 + 80904711 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 82972 44 + 80997621 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89526 44 + 74645514 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 84960 44 + 75148670 ATTTAGCTCAAACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896600 44 - 1291538 ATTTAGCTCACACTTCCATTCCCAACCCAGTCTTGGTCCCAAGA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I a score=21896.000000 s hg38.chr17_GL383563v3_alt 161923 8 + 375691 CAGGACCC s ponAbe2.chr17 52738 8 + 73212453 CAGGAccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116684 8 - 81552678 CAGGAccc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82189 8 + 80904711 CAGGAccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83016 8 + 80997621 CAGGAccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89570 8 + 74645514 CAGGACCC i papAnu2.chr16 C 0 T 12 s chlSab2.chr16 85004 8 + 75148670 CAGGAccc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896644 8 - 1291538 CAGGAccc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e panTro4.chr17 156312 0 + 82630442 C a score=19096.000000 s hg38.chr17_GL383563v3_alt 161931 37 + 375691 CCAAGGCATTTCACTCCCATCTGGGGCAGTTATTACA s ponAbe2.chr17 52746 37 + 73212453 ccaaggcatttcattcccgtctggggcagttattaca i ponAbe2.chr17 C 0 C 0 s chlSab2.chr16 85012 37 + 75148670 ccaaggcatttcattcccatttggggcagttattaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896652 37 - 1291538 ccaaggcatttcattcccattcggggcagttattata i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e papAnu2.chr16 89578 12 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e panTro4.chr17 156312 0 + 82630442 C a score=2111.000000 s hg38.chr17_GL383563v3_alt 161968 38 + 375691 GAGCCC-TTCTTCT---GCGCTAAAATTGGCCTCACTgaaat s calJac3.chrUn_GL286409 896689 42 - 1291538 gagccctttcttcctaagtactaaaattggcctccctgaaat i calJac3.chrUn_GL286409 C 0 I 69 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89578 12 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156312 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 162006 79 + 375691 caggacccccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcactaaaattggcctcgctg e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89578 12 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156312 0 + 82630442 C a score=28.000000 s hg38.chr17_GL383563v3_alt 162085 4 + 375691 aaaT s papAnu2.chr16 89566 4 + 74645514 AAGA i papAnu2.chr16 T 12 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156312 0 + 82630442 C a score=13414.000000 s hg38.chr17_GL383563v3_alt 162089 51 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTACAGAGCCC s panTro4.chr17 156312 51 + 82630442 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTACAGAGCCC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 89570 51 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCC i papAnu2.chr16 C 0 T 51 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C a score=182.000000 s hg38.chr17_GL383563v3_alt 162140 2 + 375691 TT s panTro4.chr17 156363 2 + 82630442 TT i panTro4.chr17 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89621 51 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C a score=0.000000 s hg38.chr17_GL383563v3_alt 162142 370 + 375691 CTTCTGCGCTAAAATTGGCCTCACTgaaatcaggacccccaaggcatttcgttcccatctggggcagttattatggagccctttcttcttctgcactaaaattggcctcgctgaaatcaggacccccaaggcatttcattcctgtttggggcagttattacagagcccttcttctgcgctaaaattggcctcactgaaaTCAGGAcccccaaggcatttcgttcccatctggggcagttattatggagccctttcttcttctgcactaaaattggcctcgctgaaaTCAGGAcccccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89621 51 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6630.000000 s hg38.chr17_GL383563v3_alt 162512 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 51 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 162599 83 + 375691 caggacccccaaggcatttcattcctgtttggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6630.000000 s hg38.chr17_GL383563v3_alt 162682 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 87 T 91 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 162769 249 + 375691 caggacctccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaTCAGGAcccccaaggcatttcgttcccatctggggcagttattatggagccctttcttcttctgcactaaaattggcctcgctgaaaTCAGGAcccccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcttcactg e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 91 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=3451.000000 s hg38.chr17_GL383563v3_alt 163018 45 + 375691 aaaTCAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTAT s papAnu2.chr16 89566 45 + 74645514 AAGACAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTAT i papAnu2.chr16 T 91 T 41 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 163063 126 + 375691 GGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaatcaggacccccaaggcatttcattcctgtttggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89611 41 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6630.000000 s hg38.chr17_GL383563v3_alt 163189 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 41 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 163276 83 + 375691 caggacctccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6630.000000 s hg38.chr17_GL383563v3_alt 163359 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 87 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 163446 83 + 375691 caggacccccaaggcatttcattcctgtttggggcagttattacagagcccttcttctgcactaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6630.000000 s hg38.chr17_GL383563v3_alt 163529 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 87 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 163616 83 + 375691 caggacccccaaggcatttcattcctgtttggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6630.000000 s hg38.chr17_GL383563v3_alt 163699 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 87 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 163786 932 + 375691 caggacccccaaggcatttcattcttgtttggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaTCAGGAcccccaaggcatttcgttcccatctggggcagttattatggagccctttcttcttctgcactaaaattggcctcgctgaaatcaggacctccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcctcactgaaatcaggacccccaaggcatttcgttcccatctggggcagttattatggagccctttcttcttctgcactaaaattggcctcgctgaaaTCAGGAcccccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaTCAGGAcccccaaggcatttcgttcccatctggggcagttattatggagccctttcttcttctgcactaaaattggcctcgctgaaaTCAGGAcccccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaTCAGGAcccccaaggcatttcgttcccatctggggcagtattatggagccctttcttcttctgcactaaaattggcctcgctgaaaTCAGGACCCCCAAGGCATTTTCATTCCTGGTTTGGGGCAGTTATTACAGAGCCCTTCTTCTGCGCTAAAATTGGCCTCACTggaaatcaggacccccaaggcatttcgttcccatctggggcagttattatggagcccattcttcttctgcactaaaattggcctcccGAAATCAGGACCTCCAAGGCATTTCATTTCCATCGGGGCAGTTATTACAGAGCCCTTCTTCGCGCTAAAATTGGCCTCACTGGAAT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=5969.000000 s hg38.chr17_GL383563v3_alt 164718 86 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTTTTC-GCACTAAAATTGGCCTcgcagaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 87 T 91 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 164804 248 + 375691 caggacccccaaggcaattcattccagtttggggcagttaatacagagcccttcttctgcgctaaaattggcctcAAGGAATCAGGAcccccaaggcatttcgttcccatctggggcagttattatggagccctttcttcttctgcactaaaattggcctcgctgaaatcaggacctccaaggcatttcattcccatctggggcagttattacagagcccttcttctgtgctaaaattggcctcactg e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 91 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6658.000000 s hg38.chr17_GL383563v3_alt 165052 91 + 375691 aaaTCAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89566 91 + 74645514 AAGACAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 91 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 165143 87 + 375691 caggacccccaaggcatttcattcctgtttggggcagttattatggagcccgttcttcttctgcactaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6405.000000 s hg38.chr17_GL383563v3_alt 165230 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTGGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 87 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 165317 257 + 375691 caggacccccaaggcatttcattcctgtttggggcagttattatggagcccgttcttcttctgcactaaaattggcctGGCTgaaatcaggacccccaaggcatttcattcctgtttggggcagttattatggagccctttcttcttctgcactaaaattggcttcgctgaaaTCAGGAcccccaaggcatttcattcccatctggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=6630.000000 s hg38.chr17_GL383563v3_alt 165574 87 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATGGAGCCCTTTCTTCTTCTGCACTAAAATTGGCCTCGCTgaaat s papAnu2.chr16 89570 87 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACAGAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 T 87 T 87 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=0.000000 s hg38.chr17_GL383563v3_alt 165661 83 + 375691 caggacctccaaggcatttcattcctgtttggggcagttattacagagcccttcttctgcgctaaaattggcctcactggaaT e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 87 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=3543.000000 s hg38.chr17_GL383563v3_alt 165744 45 + 375691 CAGGACCCCCAAGGCATTTCGTTCCCATCTGGGGCAGTTATTATG s papAnu2.chr16 89570 45 + 74645514 CAGGACCCCCAAGGCATTTCATTCCTGTTTGGGGCAGTTATTACA i papAnu2.chr16 T 87 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e ponAbe2.chr17 52783 0 + 73212453 C e panTro4.chr17 156365 0 + 82630442 C a score=2134.000000 s hg38.chr17_GL383563v3_alt 165789 12 + 375691 GAGCCCTTTCTT s ponAbe2.chr17 52783 11 + 73212453 gagccctt-ctt i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 89615 12 + 74645514 GAACCCTTTCTT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C e panTro4.chr17 156365 0 + 82630442 C a score=14757.000000 s hg38.chr17_GL383563v3_alt 165801 30 + 375691 CTTCTGCACTAAAATTGGCCTCGCTgaaat s panTro4.chr17 156365 30 + 82630442 CTTCTGCACTAAAATTGGCCTCGCTgaaat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52794 30 + 73212453 cttctgcactaaaattggcctcgctgaaaT i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 89627 30 + 74645514 CTTAGGTACTAAAATTGGCCTCCCTGAAAT i papAnu2.chr16 C 0 T 79 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C a score=1840.000000 s hg38.chr17_GL383563v3_alt 165831 8 + 375691 caggacct s panTro4.chr17 156395 8 + 82630442 caggaccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52824 8 + 73212453 CGGGAccc i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C e papAnu2.chr16 89657 79 + 74645514 T e rheMac3.chr16 82197 0 + 80904711 C e macFas5.chr16 83024 0 + 80997621 C e nomLeu3.chr19 116692 0 - 81552678 C a score=25977.000000 s hg38.chr17_GL383563v3_alt 165839 13 + 375691 ccaaggcatttca s panTro4.chr17 156403 13 + 82630442 ccaaggcatttca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52832 13 + 73212453 ccaaggcatttca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116692 13 - 81552678 ccaaggcatttca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82197 13 + 80904711 ccaaggcatttca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83024 13 + 80997621 ccaaggcatttca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89578 13 + 74645514 CCAAGGCATTTCA i papAnu2.chr16 T 79 C 0 e mm10.chr11 75834395 326 + 122082543 I e canFam3.chr9 15656549 811 - 61074082 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C a score=50379.000000 s hg38.chr17_GL383563v3_alt 165852 24 + 375691 ttcctgtttggggcagttattatg s panTro4.chr17 156416 24 + 82630442 ttcctgtttggggcagttattatg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52845 24 + 73212453 ttcccgtttggggcagttattatg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116705 24 - 81552678 ttcccgtttggggcagttattact i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82210 24 + 80904711 ttcctgtttggggcagttattaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83037 24 + 80997621 ttcctgtttggggcagttattaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89591 24 + 74645514 TTCCTGTTTGGGGCAGTTATTACA i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15657360 23 - 61074082 ttccagtttggaa-agttattata i canFam3.chr9 I 811 C 0 e mm10.chr11 75834395 326 + 122082543 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I e chlSab2.chr16 85049 0 + 75148670 C a score=679493.000000 s hg38.chr17_GL383563v3_alt 165876 268 + 375691 gagccctttcttcttctgtactaaaattggcctccctgaaatttctttcaagggtcccagttccgacctgtggagtga--ccgaatgaagctggcccttttcccag--aagtcctttgtgtgtttgaaggacaggaaaatgtctttcctttcctctcccaggccttctctataccagtctcaatgcccccgttaaccctctttcatacagcagtttcccagaGGGTGAGCTCAGggatgtccaagtcagaaggcgctttggaggccacccgt s panTro4.chr17 156440 268 + 82630442 gagccctttcttcttctgtactaaaattggcctccctgaaatttctttcaagggtcccagttccgacctgtggagtga--ccgaatgaagctggcccttttcccag--aagtcctttgtgtgtttgaaggacaggaaaatgtctttcctttcctctcccaggccttctctataccagtctcaatgcccccgttaaccctctttcatacagcagtttcccagaGGGTGAGCTCGGggatgtccaagtcagaaggcgctttggaggccacccgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 52869 267 + 73212453 gagccctttcttcttctgtactaaaattggcctccctgaaatttctttcaagggt-ccagttctgacctgtggagtga--ccgaatgaagctggccctttttccag--aagtccttcgtgtgtttgaaggacaggaaaatgtctttcctttcctctcccaggccttctctgtaccagtctcaatgcccccgttaacccgctttcctacagcagtttcccagaGGGTGAGCTCAGGGATGTCCAAGTCAGAAGGGGCTTTGGGGGCTGCCTGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116729 265 - 81552678 gag-ccttccttcttctgtactaaaattggcctccctgaaatttctttcaacggtcccagttccgacctgtggagtga--ccgaatgaagctggccctttttccag--aagtcccttgtgtgtttgaagggcaggaaaatgtctttcctttcctctcccaggccttctctgtaccagtctcaatgccccagttaaccctctttcatacagcag-gtcccagaGAGTGAGCTCAGGGATGTCCAAGTCAGAC-GCGCTTTGGAGGCCACCTGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82234 263 + 80904711 gaaccctttcttcttaggtactaaaattggcctccctgaaatttctgtcgaggatctcagttccgacctgtggagtga--ctgactgaagct----cttttcccag--aagtccttcgtgtgtttgaaggacaggaaaatgtctttccttgcctctcccaggccttctctgcaccagtctcaacgccccagttaactctctttcatacggcag-gtcccagaGGGTGAGCTCAGggatatccaagtcagaaggcgctttggaggccacccgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83061 263 + 80997621 gaaccctttcttcttaggtactaaaattggcctccctgaaatttctgtcgaggatctcagttccgacctgtggagtga--ctgactgaagct----cttttcccag--aagtccttcgtgtgtttgaaggacaggaaaatgtctttccttgcctctcccaggccttctctgcaccagtctcaacgccccagttaactctctttcatacggcag-gtcccagaGGGTGAGCTCAGggatatccaagtcagaaggcgctttggaggccacccgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89615 263 + 74645514 GAACCCTTTCTTCTTAGGTACTAAAATTGGCCTCCCTGAAATTTCTGTCAAGGATCCCAGTTCTGACCTGTGGAGTGA--CTGACTGAAGCt----ttttttCCAG--AAGTCCTTCGTGTGTTTGAAGGACAGGAAAAtgtctttccttgcctctcccaGGCCTTCTCTGCACCAGTCTCAATGCCCCAGTTAACTCTCTTTCATAAGGCAG-GTCCCAGAGGGTGAGCTCAGGGATATCCAAGTCAGAAGGCGCTTTGGAGGCCACCCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 85049 263 + 75148670 gaaccctttcttcttacgtactaaaattggcctccctgaaatttctgtcaaggatcccagttctgacctgtggagtga--ctgactgaagcc----cttttcccag--aagtccttcgtgtgtttgaaggacaggaaaacgtctttccttgcctctcccaggccttctctgtgccagtttcaatgccccagttaactctctttcatatggcag-gtcccagaGGGTGAGCTCAGggatatccaagtcagaaggcgctttggaggccccctgt i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15657383 248 - 61074082 --aagctctctgcttatgcactaaaatcagcctccctgaa----ctttcaaatattctggttctaacctctgcagtaattctgaatgacattggtccttttcccaggaaggcccttccagtgtttaaaggaaagaaaaatgt-----------gcccccaggctatctctgcaccagcctcaaggccct-gttaactctcttccatatg--aG-GTCACAGAGGA-GAGCTCTGG--tgttaaatccggaagacacttgggggaccacctgc i canFam3.chr9 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I e calJac3.chrUn_GL286409 896731 69 - 1291538 I a score=1074767.000000 s hg38.chr17_GL383563v3_alt 166144 369 + 375691 tctgtctcact--tgctaacaagaaggaaatgcaggccc-agagGTCACAGCAGGTCCTGGGGACCCCATGGTGGTTTCATGGCAGGACTGACCTAGTGCAGGGAGGTCTGCACCTGATTTTCT-CAGCTCTCATGATTCAAGAGGCAAACTCTCAGTTGGGGAACGCTCACAGGTGGGCATGGGAGGAGTCCCAGGTATGCAGGCCAAGGGCACG-GGTGGCCTGGCTGGCCCTGGCTCCTGTCCTTTGCCTGCCCTCCTCACCCTGCTGTGTGTACAGAAGAGCCTCAAGGAGCCT-GTTGTCCCATCCCTAGGCCTGCTTCTCCTTCCAGATGTAGAAGAACTCCTTGGACACCCACTGGGAA----------------GCAGCAAAA s panTro4.chr17 156708 369 + 82630442 tctgtctcact--tgctaacgagaaggaaatgcaggccc-agagGTCACAGCAGGTCCTGGGGACCCCATGGTGGTTTCATGGCAGGACTGACCTAGTGCAGGGAGGTCTGCACCTGATTTTCT-CAGCTCTCATGATTCAAGAGGCAAACTCTCAGTTGGGGAACGCTCACAGGTGGGCATGGGAGGAGTCCCAGGTATGCAGGCCAAGGGCACG-GGTGGCCTGGCTGGCCCTGGCTCCTGTCCTTTGCCTGCCCTCCTTACCCTGCTGTGTGTACAGAAGAGCCTCAAGGAGCCT-GTCGTCCCATCCCTAGGCCTGCTTCTCCTTCCAGATGTAGAAGAACTCCTTGGACACCCACTGGGAA----------------GCAGCAAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53136 385 + 73212453 TCTGTCTCACC--TGCTAACGAGAAGAAAATGCAGGCCC-AGAGGTCACAGCAGGTCCTGGGGACCCCATGGTGGTTTCATGACAGGACTGACCTAGTGCAGGGAGGTCTGCACCTGATTTTCT-CAGCTCTCATGATTCAAGAGGCAAACTCTCAGTTGGGGAACACTCACAGGTGGGCACGGGTGGAGTCCCAAGTGTGTGGGCCAAGGGCACG-GGTGGCCTGGCTGGCCCTGGCTCCTGTCCTTTGCCTGCCCTCCTTCCCCCGCTGTGTGTACAGAGGAGCCTCAAGGAGCCT-GTTGTCCCATCCCTAGGCCTGCTCCTCCTTCCAGATGCAGAAGAACTCCTTGGACACCCACTGGGAAGCAGCAATCTGAGGAGGCAGCAAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 116994 380 - 81552678 TCTGTCTCACT--TGCTAATGAGAAGGAAATGCAGGCCC-AGAGGTCACAGCA-GTCCT-GGGACCCCATGGTGGTTTCATGGCAGGACTGACCTAGTGCAGGGAGGTCTGCCCCTGATTTTCT-CAGCTCTCATGATCCAAGAGGCAAACTCTCAGTTGGGGAACGCTCACAGGTGGGCATGGGAGGAGTCCCAGGTGTGTGGGCCATGGGCATG-GGTGGCCTGGCTGGCCCTGGCTCCTGTCCTTTGCCTGCCCTCCTTCCCCCGCTGTGTGTACAGAGGAGCCTCAAGGAGCCT-GTCGTCCCATCCCTAGGCCTGCTTCTCCTTCCAGATGT---AGAACTCCTTGGACACCCGCTGGGAAGCAGCAATCCGAGGAAGCAGCAAAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82497 386 + 80904711 tctgtctcact--tgctaacgagaaggaaatgcaggccc-agaggtcacagcaggtcctggggaccccacggtggtttcatggcaggactgACCTAGTGCAGGGGGTTCTGTACCTGATTTTCT-CAGCTCTCACAATTCAGGAGGTGAACTCTCAGCTGGGGAATGCTCACAGGTGGGCGTGGGAGGAGTCCCAGGTGTGTGAGCCAAGGGCATGCGGTGGCCTGGCTGGCCCTGGCTCCTGTCCCTTGCCTGCTCTCCTTCCCCCACTGTGTGTACAGAGGAGCCTCCAAGAGCCTGGTTGTCCCATCCCTAGGCCTGCTTCTCCTTCCAGATGTAGAACTACTCCTTGGACACCCACTGGGAAGCAGCAATCCGAGGT-GCAGCAAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83324 386 + 80997621 tctgtctcact--tgctaacgagaaggaaatgcaggccc-agaggtcgcagcaggtcctggggaccccacggtggtttcatggcaggactgACCTAGTGCAGGGGGTTCTGTACCTGATTTTCT-CAGCTCTCACGATTCAGGAGGTGAACTCTCAGCTGGGGAATGCTCACAGGTGGGCGCGGGAGGAGTCCCAGGTGTGTGAGCCAAGGGCATGCGGTGGCCTAGCTGGCCCTGGCTCCTGTCCCTTGCCTGCTCTCCTTCCCCCACTGTGTGTACAGAGGAGCCTCCAAGAGCCTGGTTGTCCCGTCCCTAGGCCTGCTTCTCCTTCCAGATGTAGAACTACTCCTTGGACACCCACTGGGAAGCAGCAATCCGAGGT-GCAGCAAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 89878 386 + 74645514 TCTGTCTCACT--TGCTAACGAGAAGGAAATGCAGGCCC-AGAGGTCGCAGCAGGTCCTGGGGACCCCACGGTGGTTTCATGGCAGGAATGACCTAGTGCAGGGAGTTCTGTACCTGATTTTCT-CAGCTCTCACGATTCAGGAGATGAACTCTCAGCTGGGGAACGCTCACAGGTGGGCGCGGGAGGAGTCCCAGGTGTGTGAGCCAAGGGCATGCGGTGGCCTGGCTGGCCCTGACTCCTGTCCCTTGCCTGCTCTCCTTCCCCCACTGTGTGTACAGAGGAGCCTCCAAGAGCCTGGTTGTCCCGTCCCTAGGCCCGCTTCTCCTTCCAGATGTAGAAGAACTCCGTGGACACCCTCTGGGAAGCAGCAATCCCAGGT-GCAGCAAAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 85312 386 + 75148670 tctgtctcact--tgctaacgagaaggaaatggaggccc-agaggtcacagcaggtcctggggaccccacggtggtttcatggcaggactgACCTAGTGCAGGGAGTTCTGTACCTGATTTTCT-CAGCTCTCACGATTCCGGAGGTGAACTCTCAGCTGGGGAACGTTCACAGGTGGGCGTGGGAGGAGTCCCAGGTGTGTGAGCCAAGGGCATGCGGTGACCTGGCTGGCCCTGGCTCCTGTCCCTTGCCTGCTCTCCTTCCCCCACTGTGTGTACAGAGGAGCCTCAAAGAGCCTGGTTGTCCCGTCCCTAAGCCCGCCTCTCCTTCCAGATGTAGAAGAACTCCTTGGACACCCGCTGGGAAGCAGCAATCCGAGGT-GCAGCAAAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 896800 321 - 1291538 TCCGTCTCACT--TGCTAACGAGAAGAAAATGCAGGCCC-AGAGGTCATGGCAGGTCCT-----------------TTCATGGTAGAACTGAGCTCATGCAGGGAACTTTGTCCCTGATTTTCA-CA-CTCTCAGGATTCAAGAGGCAACCTCTCAGCTGGGGAACCCTCACAGGTGAGCGTGGGAGGAGTCCCAGGTGT--------------------------GCCAGCCCTGCCTCCCGTTGTCCACCTGCCCTGCTTCCCCCACTGTGTGGACAGAGGAGCCTCAAGAAGCCT-CATCACCCATCCCTAGGCCTGCTTCTCCTTCCAGATGT---AGAACTCTGTGGAAACCTGCTGGGAA----------------GCAGCAA-- i calJac3.chrUn_GL286409 I 69 C 0 s canFam3.chr9 15657631 291 - 61074082 tccatcacatttgtgctgaacagaaggggacaggagcccaagaggtcaagatatgtgttcagggccccactgtggtttcatggcagagctgagctagCTCAAGGAACTGCATACCTGATTTTTTGCAGCTCTCAGCGTTCACGAGACACAATCTCATCTAGGGAATGCTCACAGGGAGAC---TGAGGAATTCTGGGTGTGCA--------------GGCAGGCTGGCTAGGTCTGCCTCC---------------CTCCCTCCACCCCTGCACACACAGCTGGGTCT------GCCC-----------------------TCCTCCCTCCA-------------CCCTTGCAAGTACAGCGGGG-------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75834395 326 + 122082543 I a score=70869.000000 s hg38.chr17_GL383563v3_alt 166513 34 + 375691 CCACTCTGTCCCT------GGGGCTTTGGAAATAAACAGC s panTro4.chr17 157077 34 + 82630442 CCACTCTGTCCTT------GGGGCTTCGGAAATAAACAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53521 34 + 73212453 CCACTCTGTCCCT------GGAGCTTCGGAAATAAACAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117374 40 - 81552678 CCACTCTGTCCCTGTCTCCGGGGCTTCGGAAATAAACAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82883 34 + 80904711 CTACTGTGTCCCT------GGGGCCTCGGAAATAGGCAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83710 34 + 80997621 CTACTCTGTCCCT------GGGGCCTCGGAAATAGGCAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 90264 34 + 74645514 CTACTCTGTGCCT------GGGGCCTCGGAAATaagcagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 85698 34 + 75148670 CTACTCTGTGCCT------GGGGCCTCGGAAATAAGCAGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897121 17 - 1291538 -----------------------CTTTGAAAAGCAGCAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75834721 34 + 122082543 CCACTCAGCACCT------CAGGCTCTGGAAACAAACAGC i mm10.chr11 I 326 I 2 s canFam3.chr9 15657922 4 - 61074082 ----TCTG-------------------------------- i canFam3.chr9 C 0 C 0 a score=349025.000000 s hg38.chr17_GL383563v3_alt 166547 164 + 375691 AC-ttttttttttttttttttttttttttgagatggagtcttgatctgtcgccaggctggagttcagtgatgcaatctgggctcacagcaacctccaccccctggattcaggcaattctcctgtctcagcctcccaagtagctgtgattacaggcacccgccacc s panTro4.chr17 157111 162 + 82630442 AC-tttttttttttttttttttttttt--gagatggagtcttgatctgtcgccaggctggagtgcagtgatgcaatctgggctcacagcaacctccacctcctggattcaggcaattctcctgtctcagcctcccaagtagctgggattacaggcacccaccacc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53555 152 + 73212453 AC-tctttttttttttt------------gagatggagtcttgctctgttgccaggctggagtgcagtgatgcaatctcagctcacagcaacctccacctcctggattcaggcaattctcctgtctcagcctcccaagtagctaggcttacaggcacccaccacc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117414 153 - 81552678 AC-Ctttttttttttttt-----------gagatggagtcttgctctgtcaccaggctggagcgcagtgatgcgatctcggctcactgcaacctccgcctcctggattcaggcacttctcctgtctcagcctcctaagtagctgggatcacaggcacccgccacc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 82917 160 + 80904711 AC-tttttttttttttttttttttt----gagacagagtctcgctctgtccccaggctggagtgcagtggcgcggtctcggctcactgccacctccgcctcccagactgaggcgattctcctgcctcagcctcccaagtagctgggattacaggcacccgccacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83744 161 + 80997621 ACttttttttttttttttttttttt----gagacagagtctcgctctgtccccaggctggagtgcagtggcgcggtctcagctcactgccacctccacctcccagactgaggcgattctcctgcctcagcctcccaagtagctgggattacaggcacccgccacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 90298 154 + 74645514 ac-------tttttttttttttttt----gagacagagtctcgctctgtccccaggctggagtgcagtggcgcggtctcggctcactgctacctccacctcccagactgaggtgattctcctgcctcagcctcccaagtagctgggattacaggcgcccgccacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 85732 152 + 75148670 CC---------tttttttttttttt----gagacagagtctcgctctgtccccaggctggagtgcagtggcgcggtctcggctcactgccacctccacctcccagattgaggtgattctcctgtctcagcctcccaaatagctgggattacaggcacccgccacc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897138 136 - 1291538 AT--------TTTTTGGGATGGAGG----GTgatgaagtcttg--ctgtcaccaggctggaatgcaa---------------tcactgcaacctctatctcctgggttcaagagattctcctcccttagtcttccaagtagctgggattacaggcacaggccacc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15657926 71 - 61074082 -----------------------------------------CTTTCTGTC------CTGCTCTGCAGTGGTGCTAAC--------------ACTTTAGCTCCTAG---------------CCATCCCAGCCT------------------CAGGCCCCCTCCTCC i canFam3.chr9 C 0 I 40 e mm10.chr11 75834755 2 + 122082543 I a score=191055.000000 s hg38.chr17_GL383563v3_alt 166711 77 + 375691 acacccagctaattttcatatttttagtagaggtggggtttcaccatgttgggcaagatggtctcaatctcctgacc s panTro4.chr17 157273 77 + 82630442 acacccagctaattttcatatttttagtagaggtagggtttcaccatgttgggcaagatggtctcaatctcctgacc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53707 77 + 73212453 acacccagctaatttttgtatttttagtagaggtggggtttcaccatgttgggcaagatggtctcaatctcctgacc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117567 77 - 81552678 acacccagctaatttttgtatttttagtagaggtggggtttcaccatgttgggcaagatggtctcaatctcctgacc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83077 70 + 80904711 gcgcccggctaattttcttatttttagtggaggcggggcttca-catgttgggcaggatggtctcaa------gacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83905 70 + 80997621 gcgcccggctaattttcttatttttagtggaggcggggcttca-catgttgggcaggatggtctcaa------gacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 90452 71 + 74645514 gcgcccggctaattttcttatttttagtagaggcggggcttcaccatgttgggcaggatggtctcaa------gacC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 85884 70 + 75148670 gcgcccggctaattttcttatttttagtggaggcggggcttca-cgtgttgggcaggatggtctcaa------gacc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897274 77 - 1291538 acacctggctaatttttgtatttgcagtagagatggggtttcaccatgttggccagactggtctcgatctcctgacc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75834755 2 + 122082543 I e canFam3.chr9 15657997 40 - 61074082 I a score=163136.000000 s hg38.chr17_GL383563v3_alt 166788 56 + 375691 tcatgatctg----cccaccccagcctcctaaagtgctgggattacagacataagccact s panTro4.chr17 157350 56 + 82630442 tcatgatccg----cccaccccggcctcctaaagtgctgggattacagacataagccact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53784 56 + 73212453 tcatgatccg----cccactccggcctcctaaagtgctgggattacagacataagccact i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117644 56 - 81552678 tcatgatccg----cccaccccggcctcctaaagtgctgggatgacagacataagccact i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83147 56 + 80904711 tcatgatccg----ctcacctcagcctcctgaagtgctgggattacaaacataagccact i rheMac3.chr16 C 0 C 0 s macFas5.chr16 83975 56 + 80997621 tcatgatccg----ctcacctcggcctcctgaagtgctgggattacagacataagccact i macFas5.chr16 C 0 C 0 s papAnu2.chr16 90523 56 + 74645514 TCacgatccg----ctcacctcggcctcctgaagtgctgggattacagacataagccact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 85954 56 + 75148670 tcatgatccg----ctcacctcggcctcctgaagtgctgggattacagacataagccact i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897351 55 - 1291538 ttatgatctg----cccaccttggtcttccaaagagctgggatgacaggcat-ggccact i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15658037 56 - 61074082 CCATGATCTGAGGAAGCAGCAAAGCCATCTGCACCAGGGGGGCTTCAGAAACAAGC---- i canFam3.chr9 I 40 C 0 e mm10.chr11 75834755 2 + 122082543 I a score=61641.000000 s hg38.chr17_GL383563v3_alt 166844 61 + 375691 gtgcccggccTAATAG-----tttcttttcttttcttttctttttcttcctttttttttttttttt s panTro4.chr17 157406 56 + 82630442 gtgcccggccTAATAG-----TTTCGTTTCTTTTCTTTT-----TCTTCCtttttttttttttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53840 42 + 73212453 gtgcccagccTAATAG-----tttcatttcatttcattt-------------------cttttttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117700 45 - 81552678 gtgcacggtcTAAT-G-----TTTCATTTCATTTCAttt---------------ctcttttttttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83203 42 + 80904711 gtgcccagccTAATAG-----TTTCATTTCTTTTCtttt-------------------ctcttttc i rheMac3.chr16 C 0 I 4 s macFas5.chr16 84031 42 + 80997621 gtgcccagccTAATAG-----TTTCATTTCTTTTCtttt-------------------ctcttttc i macFas5.chr16 C 0 I 4 s papAnu2.chr16 90579 42 + 74645514 gtgcccagcctaatag-----tttcatttcttttctttt-------------------ctcttttc i papAnu2.chr16 C 0 I 309 s chlSab2.chr16 86010 47 + 75148670 gtgcccagccTAATAGTTTCATTTCATTTCTTTTCtttt-------------------cttttttc i chlSab2.chr16 C 0 I 4 s canFam3.chr9 15658093 12 - 61074082 --------------AG-----TATCCTTGCT----------------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75834755 2 + 122082543 I e calJac3.chrUn_GL286409 897406 0 - 1291538 C a score=97041.000000 s hg38.chr17_GL383563v3_alt 166905 48 + 375691 tttttttgagatggagtttcgctcctgttgcccaggctggactgcaCC s panTro4.chr17 157462 44 + 82630442 ttt----gagatggagtttcgctcctgttgcccaggctggagtgcaCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53882 44 + 73212453 ttt----gagatggattttcgctcctgctgcccaggctggagtgcaCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117745 44 - 81552678 ttt----gagatggattttcactcctgttgcccaggctggagtgcaCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83249 44 + 80904711 tct----gagacggagtttcgctcttgttgcccaggccggagtacaCC i rheMac3.chr16 I 4 C 0 s macFas5.chr16 84077 44 + 80997621 ttt----gagacggagtttcgctctggttgcccaggccggagtgcaCC i macFas5.chr16 I 4 C 0 s papAnu2.chr16 90930 44 + 74645514 ttt----gagacggagttttgctcttgttgcccaggccggagtgcacc i papAnu2.chr16 I 309 C 0 s chlSab2.chr16 86061 44 + 75148670 ttt----gagacagagtttcgctcttgttgcccaagctggagtgcaCC i chlSab2.chr16 I 4 C 0 e mm10.chr11 75834755 2 + 122082543 I e canFam3.chr9 15658105 0 - 61074082 C e calJac3.chrUn_GL286409 897406 0 - 1291538 C a score=77203.000000 s hg38.chr17_GL383563v3_alt 166953 34 + 375691 GTGCCCGGCCAATAAGCAGCATTTCACTCCCCAC s panTro4.chr17 157506 34 + 82630442 GTGCCCGGCCAATAAGCAGCATTTCACTCCCCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53926 34 + 73212453 ACGCCCGGCCAGTAAGCAGCATTTTACTCCTGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117789 34 - 81552678 ACGCCCAGCCAATAAGCAGCATTTTACTCCCCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83293 34 + 80904711 GCACCCAGCCAATAAGCAGCACTTGAGTCCCCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 84121 34 + 80997621 GCACCCAGCCAATAAGCAGCACTTGACTCCCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 90974 34 + 74645514 gcacccagccgataAGCAGCATTTGACTcccccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 86105 34 + 75148670 GCACCCAGCCAATAAGCAGCATTTGACTCTCCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897406 34 - 1291538 gcacctgaccAATAAGCAGCATGTTACTCCCCAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15658105 4 - 61074082 GTGC------------------------------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75834755 2 + 122082543 I a score=779504.000000 s hg38.chr17_GL383563v3_alt 166987 198 + 375691 CTTACCTGACTCCTTCCAGGGTTTGTCGCCTTTCCGGTCCCTGACCCCAGTGGATGGGAGTCTGTCCTCTAGGCTGGAGGAGCTAAGATCCGAGTCACTGTCACTGTCACTGGAAACCACTGGAAGAGACAGACCACAGCACAGGAGGTCACCC-GACCAGCCCCTACCTGCAGGCAT---GGACGGAGGGACGAGGGC--AGG s panTro4.chr17 157540 198 + 82630442 CTTACCTGACTCCTTCCAGGGTTTGTCGCCTTTCCGGTCCCTGACCCCAGTGGGTGGGAGTCTGTCCTCTAGGCTGGAGGAGCTAAGATCTGAGTCACTGTCACTGTCACTGGAAACCACTGGAAGAGACAGACCACAGCACAGGAGGTCACCC-GACCAGCCCCTACCTGCAGGCAT---GGACGGAGGGACCAGGGC--AGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 53960 198 + 73212453 CTTACCTGACCCCCTCCAGGGTTTGTCACCTTTCCGGTCCCTGACCCCAGTGGGTGGGAGTCCGTCCTCTAGGCTGGAGGAGCTAAGATCCGAGTCACTGTCACTGTCGCTGGAAACCACTGGAAGAGACAGACCACAGCACGGGAGGTCACCC-AACCAGCCCCTGCCTGCAGGCAT---GGACAGAGGGGCCAGGGC--AGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 117823 200 - 81552678 TTTACCTGACTCCTTCCAGGGTTTGTCACCTTTCCAGTCTCTGACCCCAGTGGGTGGGAGTCTGTCCTCTAGGCTGGAGGAGCTGAGATCCGAGTCACTGTCACTGTCGCTGGAAACCACTGGAAGAGACAGACCACAGCACAGGGGGTCACCC-AACAAGCCCCTGCCTGCAGGCAT---GGACGGAGGGGCCAGGGCAGAGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83327 198 + 80904711 CTTACCTGACTCCCTCCTGGGTTTGTTGCCTTTCGGGCCCCTGACCCCAGCGGGCGGGAGTCTGTCCTCTAGGCTGGAGGAGCTGAGATCCGAGTCACTGTCACTGTCGCTGGAAACCACTGGAAGAGACAGACCACAGCACAGGAGGTCACCC-CACCAGCCTCTGCCTGTGGGCAC---GGGCGGAGGGGCCGGGGC--AGG i rheMac3.chr16 C 0 I 6 s macFas5.chr16 84155 198 + 80997621 CTTACCTGACTCCCTCCTGGGTTTGTTGCCTTTCGGGCCCCTGACCCCAGCGGGCGGGAGTCTGTCCTCTAGGCTGGAGGAGCTGAGATCCGAGTCACTGTCACTGTCGCTGGAAACCACTGGAAGAGACAGACCACAGCACAGGAGGTCACCC-CACCAGCCTCTGCCTGCGGGCAC---GGGCGGAGGGGCCGGGGC--AGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91008 197 + 74645514 cTTACCTGACTCCCTCCTGGGTTTGTCACCTTTcgggtccctgaccccagtgGGTGGGAGTCTGTCCTCTAGGCTGGAGGAGCTGAGATCCGAGTCACTGTCACTGTCGCTGGAAACCACTGGAAGAGACAGACCACAGCACAGGAGGTCACCC-CACCAGCCTCT-CCTGCAGGCAC---GGGCGGAGGGGCCGGGGC--AGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 86139 198 + 75148670 CTTACCTGACTCCCTCCTGGGTTTGTCGCCTTTCGGGCCCCTGACCCCAGTGGGCGGGAGTCTGTCCTCTAGGCTGGAGGAGCTGAGATCAGAGTCACTGTCACTGTCGCTGGAAACCACTGGAAGAGACAGACCACAGCACAGGAGGTCACCC-GACCAGCCTCTGCCTGCAGGCAT---GGGCGCAGGGGCCGGGGC--AGG i chlSab2.chr16 C 0 I 3 s calJac3.chrUn_GL286409 897440 195 - 1291538 CTTACCTGACTCCCTCCAGGGTTTGTCACTTTTTGGGTCCCTGACCCCAGTGGGTGGGAGTCTGTCCTCTAGGCTGGAGGAACTGAGATCCGAGTCACTGTCACTGTCACTGGAAACCCCTGGAAAAGATAAACCACAGCACAGGAAGTCATGC-AACCAGACACTGCC-GCAGGCAC---AGAC--AGGGGCCAGGAC--AGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75834757 191 + 122082543 CTTACCTGAGTCCCCTCTAGGCTTGTCACCTTTTGTGCCCTTGACCCCAGAGGGCAAGGGTCTGTCCTCCAGGCTGGAGGAGCTGAGATCTGAGTCACTGTCACTGTCACTGGAAACCACTGGAACAGACAG---ACAGCAGAGGAAGTCAT---GATTA--TTTTTCCTGCTTAGAC---AGTGGGGCAGGGCAGGGC--AGG i mm10.chr11 I 2 I 1 s canFam3.chr9 15658109 197 - 61074082 -TTACCTGGTTCACTGTAGGGTTTGTCACTTTTGGGCTCCTTGACCACCGACAGAGGAAGTCGGTCCTCCAGGCTAGAGGAGCTGAGATCCGAGTCACTGTCGCTGTCACTGGAAACCACTGGAACAGACACA----GGCATAGGAGATTACCCTGACCAGTCACTCTCAGCAGACACATGGGACGGAGGGGCTGGGGC--AGG i canFam3.chr9 C 0 C 0 a score=33510.000000 s hg38.chr17_GL383563v3_alt 167185 66 + 375691 -CCTCCCCAGCTCATTACCACGTGGTGTAGCAGCTCAGCTGGCCCTTTCGCTTTGGGCAGAAGAAAT s panTro4.chr17 157738 66 + 82630442 -CCTCCCCAGCTGATGAGCAGGTGGCATAGCAGCTCAGCTGGCCCTTTCGCTTTGGGCAGAAGAAAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54158 66 + 73212453 -CCTCCCCAGCTCATGATCAAGTGGCGTAGCAGCTCAGCTGGCCCTTTCGCTTTGGGCAGAAGAAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118023 66 - 81552678 -CCTCCTCAGCTCATGACCACGTGGCGTAGCAGCTCGGCTGGCCCTTTCACTTTGGGCAGAAGAAAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 84353 6 + 80997621 ----------------------------AACGAC--------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91205 6 + 74645514 ----------------------------AACGAC--------------------------------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897635 66 - 1291538 -CCTCCCCAGCTTGGGACAAAGTAGTGTAGCAGTCCAGCTGGCCCTTTTGCTTTGGGCAGGAGAAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75834949 66 + 122082543 -CTCCCTCCTGCCACCACCAAGTGGCCAAGAATTTCAGTTAGCCCTTTTGTCTGGGGCATGAGAAAC i mm10.chr11 I 1 C 0 s canFam3.chr9 15658306 65 - 61074082 CCTCCCCTCTGCCTGGACAAAGCGGCACACGACTTCAGCTGGTCCTTGTGTTTGGGACACAGAAA-- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 86337 3 + 75148670 I e rheMac3.chr16 83525 6 + 80904711 I a score=6790.000000 s hg38.chr17_GL383563v3_alt 167251 3 + 375691 AAT s panTro4.chr17 157804 3 + 82630442 AAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54224 3 + 73212453 AAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118089 3 - 81552678 AAT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 86340 3 + 75148670 AAT i chlSab2.chr16 I 3 C 0 s calJac3.chrUn_GL286409 897701 3 - 1291538 AAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75835015 3 + 122082543 AAT i mm10.chr11 C 0 C 0 s canFam3.chr9 15658371 3 - 61074082 AGT i canFam3.chr9 C 0 C 0 e papAnu2.chr16 91211 0 + 74645514 C e rheMac3.chr16 83525 6 + 80904711 I e macFas5.chr16 84359 0 + 80997621 C a score=417353.000000 s hg38.chr17_GL383563v3_alt 167254 136 + 375691 GGCCTGGGGATGGGAGGACACACATTTCTGCTGCACAAAGAGGGGAGTCCTGATGTGAGGAGGCTGGGATCT--GGGCTCAGGCTG------ACCAGCAGAGAAGAGTTCACCTGTTGGCCAGCCACCTCCACATAACACCCCC s panTro4.chr17 157807 136 + 82630442 GGCCTGGGGATGGGAGGACACACATTTCTGCTGGACAAAGAGGGGAGTCCTGGTGTGAGGAGGCTGGGATCT--GGGCTCAGCGTG------ACCAGCAGAGAAGAGTTCACCTGTTGGCCAGCCACCTCCACATGCCACCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54227 136 + 73212453 GGTCTCAGGATGGGAGGACACGCATTTCTGCTGGCCAAAGAGGGGAGTCCTGGTGTGAGGAGGCTGGGACTT--GGGCTCAGCGTG------ACCAGCAGAGAAGAGTTCACCTGTTGGCCAGCCACCTCCACATGCCACCCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118092 136 - 81552678 GGCCTGGGGATGGGAGGACACGCATTTCTGCTGGCCAAAGAGGGGAGTCCTGGTGTGAGGAGGCTGGGACTT--GGGCTCAGCGTG------AGCAGCAGAGAAGAGTTCACCTGTTGGCCAGCCATCTCCACATGCCACCCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83531 135 + 80904711 GGCCTGGGGATGGGGGGACACGTGCTTCTGCCGGCCAGAGAGGCGAGTCCTGGTGTGAGGAGGCTGGGACGT--GGGCTCTGCGTG------ACCAGCAGAG-AACGTTTGCCCGTTGGCCAGCCATCTCCACACGCCACCCCC i rheMac3.chr16 I 6 C 0 s macFas5.chr16 84359 135 + 80997621 GGCCTGGGGGTGGGGGGACACGTGCTTCTGCCGGCCAGAGAGGCGAGTCCTGGTGTGAGGAGGCTGGGACGT--GGGCTCTGCGTG------ACCAGCAGAG-AACGTTTGCCCGTTGGCCAGCCATCTCCACACGCCACCCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91211 135 + 74645514 GGCCTGGGGATGGGGGGACACGCGCTTCTGCCGGCCAAAGAGGCGAGTCCTGGTGTGAGGAGGCTGGGACGT--GGGCTCTGCGTG------ACCAGCAGAC-AGCGTTCGCCCGTTGGCCAGCCATCTCCACACGCCACCCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 86343 135 + 75148670 GGCCTGGGGATGGGGGGACACGCGCTTCTGCCGGCCAAAGAGGCGAGTCCTGGTGTGAGGAGGCTGGGACGT--GGGCTCTGCGTG------ACCAGCAGAG-AGAGTTCGCCTGTTGGCCAGTCATCTCCACACGCCACCCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897704 135 - 1291538 GGCCTGGGGACGGGAGGGCATGCATTTCTGCTGGCCACAGAGGGGAGTCCTGGCATGAGGAGGCTGGGACTCAGAGGCTCAGCGTG------ACCAGCAGAG---AGTTCACCTATTGGCCAGCCATCTTCACACGTCAGCCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75835018 102 + 122082543 ------GGAAGGGCCAGAGGCTCCTTCCCACCAGCTAAGGAGGATGGACCCCAC--------------ACAT--GG--CCAGC---------ACCATTAGTG-AAGGCTCACTCCTTAGCCAGCCATCTTCACGCA-------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15658374 137 - 61074082 GGCCTGGGGACAGGGATG---GCAGTTCTGTCAGCCGAAGAGGCAAGTCCTGGTGTGAGGAGGCCCTGACTC--GGGGCCAGAGTGACTGGCACCAGCGGGG-AGGGCTGGCCCCTCAGCCAGCGGCCTCCATGTGTGACCCC- i canFam3.chr9 C 0 C 0 a score=501.000000 s hg38.chr17_GL383563v3_alt 167390 1 + 375691 T s panTro4.chr17 157943 1 + 82630442 T i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 118228 1 - 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83666 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 84494 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91346 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 86478 1 + 75148670 C i chlSab2.chr16 C 0 C 0 e mm10.chr11 75835120 0 + 122082543 C e canFam3.chr9 15658511 0 - 61074082 C e calJac3.chrUn_GL286409 897839 0 - 1291538 C e ponAbe2.chr17 54363 0 + 73212453 C a score=198048.000000 s hg38.chr17_GL383563v3_alt 167391 74 + 375691 GTTCTAGTTCCTCTAGTGGAACCAGAACCCACTGGCCGTGTCGGAGGCTGATTATCACC-GTGATGCAGGCACAA s panTro4.chr17 157944 74 + 82630442 GTTCTAGTTCCTCTGGTGGAACCAGAACCCACTTGCCGTGTCGGAGGCTGATTATCACC-GTGATGCAGGCACAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54363 74 + 73212453 ATTCTAGTTCCTCTGGTGGAACAAGGACCCACTTGCCATGGTGGAGGCCGATTATCACC-ATGGTGCAGATGCGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118229 74 - 81552678 GTTCCAGTTCCTCTGGTGGAACCAGAACCCACTTGCCGTGGCGGAGGCCAATTATCACC-GTGGTGCAGGTGTAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83667 74 + 80904711 GTTCTAGTTCCTCTGGCAGAACCAGAACCCGCGTGCCACGGCGGAGGCTGATTCTCACC-GTGGTGCAGACGGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 84495 74 + 80997621 GTTCTAGTTCCTCTGGCAGAACCAGAACCCGCGTGCCACGGCGGAGGCTGATTCTCACC-GCGGTGCAGACGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91347 74 + 74645514 GTTCTAGTTCCTCTGGCAGAACCAGAACCCACTTGCCGCGGCGGAGGCTGATTCTCACC-ACGGTGCAGACGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 86479 74 + 75148670 GTTCTAGTTCCTCTGGCAGAACCAGAACCCGCTTGCCGCGGCGGAGGCTGATTCTCACC-TCGGTGCAGACGGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897839 74 - 1291538 ATTTTAGTTCCCAGTACGGAACCAGAACCTGCCCGCCATGGTGGAGGCTGATTATCACG-GCACTGTGGACACAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75835120 71 + 122082543 --TCGTGGCCTCCTTGTAGA--CTGGATCCCTTTTCCTTGGTTGGAATGGATGACCACCTTTGGTGTAGGCACAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15658511 69 - 61074082 ------ATCCCAGGGGCGGACTCAGAAGCCTCTCGCTGGAGGAGGAGCCAATTATCCTCTTTGGTGCAGGCACAA i canFam3.chr9 C 0 C 0 a score=62673.000000 s hg38.chr17_GL383563v3_alt 167465 20 + 375691 CAGATCTGAGGCCTCCACTC s panTro4.chr17 158018 20 + 82630442 CAGCTCTGAGGCCTCCACTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54437 20 + 73212453 CAACTCTGAGGCCTCCACTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118303 20 - 81552678 CAGCTCTGAGGCCTCCACTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 84569 20 + 80997621 CGGCTCTGAGGCCTCCACTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91421 20 + 74645514 CGGCTCTGAGGCCTCCACTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 86553 20 + 75148670 CGGCTCTGAGGCCTCCACTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897913 20 - 1291538 CAGCTCTGAAGCCTCCACCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75835191 20 + 122082543 GGACTCTGAGGTCTCTGCCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15658580 20 - 61074082 CCTCTCTGAGGCTTGTACCC i canFam3.chr9 C 0 I 30 e rheMac3.chr16 83741 0 + 80904711 C a score=-3425.000000 s hg38.chr17_GL383563v3_alt 167485 1 + 375691 A------ s panTro4.chr17 158038 1 + 82630442 A------ i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54457 1 + 73212453 G------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118323 1 - 81552678 G------ i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 84589 1 + 80997621 G------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91441 1 + 74645514 G------ i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 86573 1 + 75148670 A------ i chlSab2.chr16 C 0 I 35 s calJac3.chrUn_GL286409 897933 1 - 1291538 G------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75835211 7 + 122082543 GGCCGCA i mm10.chr11 C 0 C 0 e canFam3.chr9 15658600 30 - 61074082 I e rheMac3.chr16 83741 0 + 80904711 C a score=10088.000000 s hg38.chr17_GL383563v3_alt 167486 10 + 375691 CTGAGACAAT s panTro4.chr17 158039 10 + 82630442 CTGAGACAAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54458 10 + 73212453 GTGAGACAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118324 10 - 81552678 GTGAGACAAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 84590 9 + 80997621 -TGAGGCAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91442 9 + 74645514 -GGAGGCAAA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897934 10 - 1291538 GTGAGGCAGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75835218 10 + 122082543 CTGAACACAC i mm10.chr11 C 0 C 0 e canFam3.chr9 15658600 30 - 61074082 I e chlSab2.chr16 86574 35 + 75148670 I e rheMac3.chr16 83741 0 + 80904711 C a score=1911.000000 s hg38.chr17_GL383563v3_alt 167496 1 + 375691 A s panTro4.chr17 158049 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54468 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118334 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 84599 1 + 80997621 A i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91451 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s mm10.chr11 75835228 1 + 122082543 A i mm10.chr11 C 0 C 0 e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e rheMac3.chr16 83741 0 + 80904711 C a score=3187.000000 s hg38.chr17_GL383563v3_alt 167497 4 + 375691 GACC s panTro4.chr17 158050 4 + 82630442 GACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54469 4 + 73212453 GACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118335 4 - 81552678 GGCC i nomLeu3.chr19 C 0 C 0 s mm10.chr11 75835229 4 + 122082543 GGCC i mm10.chr11 C 0 I 2318 e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19299.000000 s hg38.chr17_GL383563v3_alt 167501 40 + 375691 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAAT s panTro4.chr17 158054 40 + 82630442 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54473 40 + 73212453 CAAGCACGACAGCTCTGAGGCCTCCACTTGGTGAGACAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118339 40 - 81552678 CAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAAT i nomLeu3.chr19 C 0 T 85 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=1202.000000 s hg38.chr17_GL383563v3_alt 167541 5 + 375691 AGACC s panTro4.chr17 158094 5 + 82630442 AGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54513 5 + 73212453 AGGCC i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C e nomLeu3.chr19 118379 85 - 81552678 T a score=10987.000000 s hg38.chr17_GL383563v3_alt 167546 23 + 375691 CAAGCACAACAGCTCTGAGGCCT s panTro4.chr17 158099 23 + 82630442 CAAGCACATCAGCTCTGAGGCCT i panTro4.chr17 C 0 T 90 s ponAbe2.chr17 54518 23 + 73212453 CAAGCGCAACAGCTCTGAGGCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 23 - 81552678 CAGGTGTAACAGCTCTGAGGCCT i nomLeu3.chr19 T 85 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=13416.000000 s hg38.chr17_GL383563v3_alt 167569 29 + 375691 CCACTCACTGAGACAATAGACCCAAAAAC s panTro4.chr17 158032 29 + 82630442 CCACTCACTGAGACAATAGACCCAAGAAC i panTro4.chr17 T 90 C 0 s ponAbe2.chr17 54541 29 + 73212453 CCACTCACTGAGACAGTAGACCCAAGTGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118317 29 - 81552678 CCACTCGGTGAGACAATAGGCCCAAGAAC i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20840.000000 s hg38.chr17_GL383563v3_alt 167598 43 + 375691 AACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGA s panTro4.chr17 158061 43 + 82630442 AACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGC i panTro4.chr17 C 0 T 90 s ponAbe2.chr17 54570 43 + 73212453 AACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118301 43 - 81552678 AACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGA i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=22489.000000 s hg38.chr17_GL383563v3_alt 167641 44 + 375691 ACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG s panTro4.chr17 158014 44 + 82630442 ACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 T 90 C 0 s ponAbe2.chr17 54613 44 + 73212453 GCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118344 44 - 81552678 ACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21637.000000 s hg38.chr17_GL383563v3_alt 167685 45 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158058 45 + 82630442 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54657 45 + 73212453 CACATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21617.000000 s hg38.chr17_GL383563v3_alt 167730 45 + 375691 AACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158103 45 + 82630442 CACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54702 45 + 73212453 CGCAACAGCTCTGAGGCCTCCACTCACTGAGATAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=38141.000000 s hg38.chr17_GL383563v3_alt 167775 86 + 375691 CACAACAGCTCGGAGGGCTCCACTCGGTGAGACAATAGACCAAAGCACAACAGCTCTGAGTCCTCCAGTCACTGAGACAATAGACC s panTro4.chr17 158148 86 + 82630442 CACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54747 86 + 73212453 TGCGTCAGCTCTGAGGCCTCCATTCGGTGAGACAATAGACCCAAGCACATCAGCTCTGAGGCCTCCACTTGATGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 86 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 90 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20169.000000 s hg38.chr17_GL383563v3_alt 167861 45 + 375691 CAAGCACAACAGCTCTGAGGCTGCCACTCACTGAGACAATAGACC s panTro4.chr17 158234 45 + 82630442 CAAGCACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54833 45 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21859.000000 s hg38.chr17_GL383563v3_alt 167906 45 + 375691 CAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC s panTro4.chr17 158279 45 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54878 45 + 73212453 CAAGTGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=22313.000000 s hg38.chr17_GL383563v3_alt 167951 52 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAAACCCAACAAC s panTro4.chr17 158324 52 + 82630442 CAAGGACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCAAAGCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54923 52 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAGCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 52 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAAC i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=546.000000 s hg38.chr17_GL383563v3_alt 168003 1 + 375691 A s panTro4.chr17 158376 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54975 1 + 73212453 A i ponAbe2.chr17 C 0 T 540 s nomLeu3.chr19 118301 1 - 81552678 A i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=18502.000000 s hg38.chr17_GL383563v3_alt 168004 37 + 375691 ACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158377 37 + 82630442 TCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54436 37 + 73212453 ACAACTCTGAGGCCTCCACTCGGTGAGACAATAGACC i ponAbe2.chr17 T 540 C 0 s nomLeu3.chr19 118302 37 - 81552678 ACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21089.000000 s hg38.chr17_GL383563v3_alt 168041 45 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158414 45 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54473 45 + 73212453 CAAGCACGACAGCTCTGAGGCCTCCACTTGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=45402.000000 s hg38.chr17_GL383563v3_alt 168086 94 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158459 94 + 82630442 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACAACAGCTCTGTGGCCTCCACTCAGTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54518 94 + 73212453 CAAGCGCAACAGCTCTGAGGCCTCCACTCACTGAGACAGTAGACCCAAGTGCAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19040.000000 s hg38.chr17_GL383563v3_alt 168180 41 + 375691 AACATCAGCTCTGAGTCCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158553 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54612 41 + 73212453 TGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19750.000000 s hg38.chr17_GL383563v3_alt 168221 45 + 375691 CAAGCACATCAGCTCTCAGGCCTCCACTCGGTGAGACAATAGGCC s panTro4.chr17 158594 45 + 82630442 CAAGTGCATCAGCTCTGTGGCCTCCACTCACAGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54653 45 + 73212453 CAAGCACATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=45327.000000 s hg38.chr17_GL383563v3_alt 168266 94 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAG s panTro4.chr17 158639 94 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54698 94 + 73212453 CAAGCGCAACAGCTCTGAGGCCTCCACTCACTGAGATAATAGGCCCAAGTGCGTCAGCTCTGAGGCCTCCATTCGGTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=18867.000000 s hg38.chr17_GL383563v3_alt 168360 41 + 375691 CACATCAGCTCTCAGGCCTCCACTCGGTGAGACAATAGACC s panTro4.chr17 158733 41 + 82630442 CACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54792 41 + 73212453 CACATCAGCTCTGAGGCCTCCACTTGATGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=43419.000000 s hg38.chr17_GL383563v3_alt 168401 90 + 375691 CAAGCACATCAGCTCTCAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC s panTro4.chr17 158774 90 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTTTGAGGCCTCCACTCACAGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54833 90 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGTGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 90 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 90 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=1326.000000 s hg38.chr17_GL383563v3_alt 168491 3 + 375691 CAA s panTro4.chr17 158864 3 + 82630442 CAA i panTro4.chr17 C 0 T 855 s ponAbe2.chr17 54923 3 + 73212453 CAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 3 - 81552678 CAG i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=41551.000000 s hg38.chr17_GL383563v3_alt 168494 87 + 375691 GCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC s panTro4.chr17 158012 87 + 82630442 GCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACC i panTro4.chr17 T 855 C 0 s ponAbe2.chr17 54926 87 + 73212453 GAACAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAGCACATCAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118297 87 - 81552678 GTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 C 0 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=44960.000000 s hg38.chr17_GL383563v3_alt 168581 94 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG s panTro4.chr17 158099 94 + 82630442 CAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55013 94 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGCGCATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 I 169 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=17449.000000 s hg38.chr17_GL383563v3_alt 168675 41 + 375691 CACATCAGCTCTGAGTCCTCCACTCACTGAGACAATAGA-CC s panTro4.chr17 158193 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGG-CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55276 42 + 73212453 CGCATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGGCCC i ponAbe2.chr17 I 169 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGG-CC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20040.000000 s hg38.chr17_GL383563v3_alt 168716 45 + 375691 CAAGCACAACAGCTCTGAGGTCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158234 45 + 82630442 CAAGCACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55318 45 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=45336.000000 s hg38.chr17_GL383563v3_alt 168761 94 + 375691 CAAGCACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGGCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158279 94 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGGACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCAAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55363 94 + 73212453 CAAGAACAACAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20291.000000 s hg38.chr17_GL383563v3_alt 168855 46 + 375691 TGCATCAGCTCTGAGGGCTCCAGTCACTGAGACAATAGACCCAAGA s panTro4.chr17 158373 46 + 82630442 CACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGC i panTro4.chr17 C 0 T 405 s ponAbe2.chr17 55457 46 + 73212453 CACATCAGCTCTGAGGCCTCCATTCGGTGAGACAATAGGCCCAAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 46 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGA i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=23272.000000 s hg38.chr17_GL383563v3_alt 168901 44 + 375691 ACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158014 44 + 82630442 ACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 T 405 C 0 s ponAbe2.chr17 55503 44 + 73212453 ACAACAGCTCTGAGGCCTCCACTCAGTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118344 44 - 81552678 ACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20657.000000 s hg38.chr17_GL383563v3_alt 168945 41 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACC s panTro4.chr17 158058 41 + 82630442 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55547 41 + 73212453 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=45290.000000 s hg38.chr17_GL383563v3_alt 168986 94 + 375691 CAAGCGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158099 94 + 82630442 CAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55588 94 + 73212453 CAAGAACAACAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20539.000000 s hg38.chr17_GL383563v3_alt 169080 45 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158193 45 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55682 44 + 73212453 AACAACAGCCCTGAGGCCTCCACTCACTAAGACAATAG-CCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=17637.000000 s hg38.chr17_GL383563v3_alt 169125 41 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACC s panTro4.chr17 158238 41 + 82630442 CACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55726 41 + 73212453 AACAACAGCCCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 41 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21595.000000 s hg38.chr17_GL383563v3_alt 169166 45 + 375691 CAAGCACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACC s panTro4.chr17 158279 45 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55767 45 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=44107.000000 s hg38.chr17_GL383563v3_alt 169211 94 + 375691 CAAGCACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158324 94 + 82630442 CAAGGACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCAAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55812 94 + 73212453 CAAGCACATCAGCTCTGAGGCCTTCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19125.000000 s hg38.chr17_GL383563v3_alt 169305 41 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACC s panTro4.chr17 158418 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55906 41 + 73212453 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 41 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=44281.000000 s hg38.chr17_GL383563v3_alt 169346 94 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACATCAGCTCTGAGGGCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158459 94 + 82630442 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACAACAGCTCTGTGGCCTCCACTCAGTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55947 94 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACTCAAGAGCATCAGCTCTGAGGCCTTCACTCGGTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19674.000000 s hg38.chr17_GL383563v3_alt 169440 41 + 375691 CACAACAGCTCTGAGGGCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158553 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56041 41 + 73212453 AACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=1926.000000 s hg38.chr17_GL383563v3_alt 169481 4 + 375691 CAAG s panTro4.chr17 158594 4 + 82630442 CAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56082 4 + 73212453 CAAG i ponAbe2.chr17 C 0 T 1474 s nomLeu3.chr19 118294 4 - 81552678 CAGG i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=43468.000000 s hg38.chr17_GL383563v3_alt 169485 90 + 375691 TGCATCAGCTCTGAGGGCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158598 90 + 82630442 TGCATCAGCTCTGTGGCCTCCACTCACAGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54612 90 + 73212453 TGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGACCCAAG i ponAbe2.chr17 T 1474 C 0 s nomLeu3.chr19 118298 90 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=22054.000000 s hg38.chr17_GL383563v3_alt 169575 45 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158688 45 + 82630442 CACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54702 45 + 73212453 CGCAACAGCTCTGAGGCCTCCACTCACTGAGATAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21224.000000 s hg38.chr17_GL383563v3_alt 169620 45 + 375691 CACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAG s panTro4.chr17 158733 45 + 82630442 CACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54747 45 + 73212453 TGCGTCAGCTCTGAGGCCTCCATTCGGTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=18622.000000 s hg38.chr17_GL383563v3_alt 169665 41 + 375691 CACATCAGCTCTCAGGCCTCCACTCGGTGAGACAATAGACC s panTro4.chr17 158778 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54792 41 + 73212453 CACATCAGCTCTGAGGCCTCCACTTGATGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=38594.000000 s hg38.chr17_GL383563v3_alt 169706 84 + 375691 CAAGCACATCAGCTCTCAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAA s panTro4.chr17 158819 84 + 82630442 CAAGAACAACAGCTTTGAGGCCTCCACTCACAGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAA i panTro4.chr17 C 0 T 810 s ponAbe2.chr17 54833 84 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGTGCATCAGCTCTGAGGCCTCCACTCACTGAGACAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 84 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAA i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=2733.000000 s hg38.chr17_GL383563v3_alt 169790 6 + 375691 TAGGCC s panTro4.chr17 158093 6 + 82630442 CAGACC i panTro4.chr17 T 810 C 0 s ponAbe2.chr17 54917 6 + 73212453 TAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118378 6 - 81552678 TAGGCC i nomLeu3.chr19 C 0 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=40836.000000 s hg38.chr17_GL383563v3_alt 169796 90 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGAAAAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC s panTro4.chr17 158099 90 + 82630442 CAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54923 90 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAGCACATCAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 90 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 90 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=45419.000000 s hg38.chr17_GL383563v3_alt 169886 94 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG s panTro4.chr17 158189 94 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGCACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55013 94 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGCGCATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 I 260 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=22281.000000 s hg38.chr17_GL383563v3_alt 169980 45 + 375691 AACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158283 45 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55367 45 + 73212453 AACAACAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACCCAAG i ponAbe2.chr17 I 260 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=2899.000000 s hg38.chr17_GL383563v3_alt 170025 8 + 375691 CACAACAG s panTro4.chr17 158328 8 + 82630442 GACAACAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55412 8 + 73212453 CACAACAG i ponAbe2.chr17 C 0 T 181 s nomLeu3.chr19 118298 8 - 81552678 TGTAACAG i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=17470.000000 s hg38.chr17_GL383563v3_alt 170033 33 + 375691 CTCTGAGGCCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158336 33 + 82630442 CTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55239 33 + 73212453 CTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 T 181 C 0 s nomLeu3.chr19 118306 33 - 81552678 CTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21807.000000 s hg38.chr17_GL383563v3_alt 170066 46 + 375691 CAAGCACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCC s panTro4.chr17 158369 46 + 82630442 AAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55272 46 + 73212453 CAAGCGCATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGGCCC i ponAbe2.chr17 C 0 I 181 s nomLeu3.chr19 118294 46 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCC i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=23382.000000 s hg38.chr17_GL383563v3_alt 170112 48 + 375691 AAGCACAACAGCTCTGAGGGCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158415 48 + 82630442 AAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55499 48 + 73212453 AAGAACAACAGCTCTGAGGCCTCCACTCAGTGAGACAATAGGCCCAAG i ponAbe2.chr17 I 181 C 0 s nomLeu3.chr19 118340 48 - 81552678 AAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=43078.000000 s hg38.chr17_GL383563v3_alt 170160 90 + 375691 TGCATCAGCTCTGAGGGCTCCAGTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158463 90 + 82630442 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACAACAGCTCTGTGGCCTCCACTCAGTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55547 90 + 73212453 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGAACAACAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 90 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20687.000000 s hg38.chr17_GL383563v3_alt 170250 41 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACC s panTro4.chr17 158553 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55637 41 + 73212453 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20173.000000 s hg38.chr17_GL383563v3_alt 170291 50 + 375691 CAAGCGTATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGA s panTro4.chr17 158594 50 + 82630442 CAAGTGCATCAGCTCTGTGGCCTCCACTCACAGAGACAATAGACCCAAGC i panTro4.chr17 C 0 I 4 s ponAbe2.chr17 55678 49 + 73212453 CAAGAACAACAGCCCTGAGGCCTCCACTCACTAAGACAATAG-CCCAAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 50 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGA i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=1119.000000 s hg38.chr17_GL383563v3_alt 170341 4 + 375691 ACAA s ponAbe2.chr17 55727 4 + 73212453 ACAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118344 4 - 81552678 ACAA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C e panTro4.chr17 158644 4 + 82630442 I a score=20893.000000 s hg38.chr17_GL383563v3_alt 170345 40 + 375691 CAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158648 40 + 82630442 CAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 I 4 C 0 s ponAbe2.chr17 55731 40 + 73212453 CAGCCCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118348 40 - 81552678 CAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21474.000000 s hg38.chr17_GL383563v3_alt 170385 45 + 375691 CACATCAGCTCCGAGGCCTCCACTCGGTGAGACAATAGACCCAAG s panTro4.chr17 158688 45 + 82630442 CACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55771 45 + 73212453 CACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACTCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19147.000000 s hg38.chr17_GL383563v3_alt 170430 41 + 375691 CACATCAGCTCTCAGGCCTCCACTCGGTGAGACAATAGACC s panTro4.chr17 158733 41 + 82630442 CACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55816 41 + 73212453 CACATCAGCTCTGAGGCCTTCACTCGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=44098.000000 s hg38.chr17_GL383563v3_alt 170471 90 + 375691 CAAGCACATCAGCTCTCAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC s panTro4.chr17 158774 90 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTTTGAGGCCTCCACTCACAGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55857 90 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 90 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 90 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19896.000000 s hg38.chr17_GL383563v3_alt 170561 39 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAA s panTro4.chr17 158864 39 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAA i panTro4.chr17 C 0 T 810 s ponAbe2.chr17 55947 39 + 73212453 CAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 39 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAA i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=22920.000000 s hg38.chr17_GL383563v3_alt 170600 51 + 375691 CAGACCCAAGAAAAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC s panTro4.chr17 158093 51 + 82630442 CAGACCCAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 T 810 C 0 s ponAbe2.chr17 55986 51 + 73212453 TAGACTCAAGAGCATCAGCTCTGAGGCCTTCACTCGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118333 51 - 81552678 TAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 C 0 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=23475.000000 s hg38.chr17_GL383563v3_alt 170651 49 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAG s panTro4.chr17 158144 49 + 82630442 CAAGCACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56037 49 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 T 404 s nomLeu3.chr19 118294 49 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAG i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21612.000000 s hg38.chr17_GL383563v3_alt 170700 45 + 375691 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG s panTro4.chr17 158193 45 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55682 44 + 73212453 AACAACAGCCCTGAGGCCTCCACTCACTAAGACAATA-GCCCAAG i ponAbe2.chr17 T 404 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20973.000000 s hg38.chr17_GL383563v3_alt 170745 45 + 375691 AACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158238 45 + 82630442 CACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55726 45 + 73212453 AACAACAGCCCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=20284.000000 s hg38.chr17_GL383563v3_alt 170790 41 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158283 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55771 41 + 73212453 CACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 41 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=44047.000000 s hg38.chr17_GL383563v3_alt 170831 94 + 375691 CAAGCACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGGCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158324 94 + 82630442 CAAGGACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCAAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55812 94 + 73212453 CAAGCACATCAGCTCTGAGGCCTTCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19447.000000 s hg38.chr17_GL383563v3_alt 170925 46 + 375691 TGCATCAGCTCTGAAGGCTCCAGTCACTGAGACAATAGACCCAAGA s panTro4.chr17 158418 46 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACACAAGA i panTro4.chr17 C 0 T 450 s ponAbe2.chr17 55906 46 + 73212453 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 46 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGA i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=22626.000000 s hg38.chr17_GL383563v3_alt 170971 44 + 375691 ACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158014 44 + 82630442 ACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 T 450 C 0 s ponAbe2.chr17 55952 44 + 73212453 ACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACTCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118344 44 - 81552678 ACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=17657.000000 s hg38.chr17_GL383563v3_alt 171015 41 + 375691 CACAACATCTCTGAGGCCTCCACTCACTGGGACAACAGACC s panTro4.chr17 158058 41 + 82630442 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55996 41 + 73212453 AGCATCAGCTCTGAGGCCTTCACTCGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=23293.000000 s hg38.chr17_GL383563v3_alt 171056 49 + 375691 CAAGCGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158099 49 + 82630442 CAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56037 49 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 T 1159 s nomLeu3.chr19 118294 49 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAG i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=22449.000000 s hg38.chr17_GL383563v3_alt 171105 45 + 375691 AACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAG s panTro4.chr17 158148 45 + 82630442 CACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54927 45 + 73212453 AACAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAG i ponAbe2.chr17 T 1159 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=21580.000000 s hg38.chr17_GL383563v3_alt 171150 45 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158193 45 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54972 45 + 73212453 CACATCAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=18130.000000 s hg38.chr17_GL383563v3_alt 171195 41 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGATAATAGACC s panTro4.chr17 158238 41 + 82630442 CACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55017 41 + 73212453 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 41 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=2643.000000 s hg38.chr17_GL383563v3_alt 171236 9 + 375691 CAAGCACAT s panTro4.chr17 158279 9 + 82630442 CAAGCACAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55058 9 + 73212453 CAAGCGCAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 9 - 81552678 CAGGTGTAA i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83741 0 + 80904711 C e macFas5.chr16 84600 0 + 80997621 C a score=19123.000000 s hg38.chr17_GL383563v3_alt 171245 21 + 375691 CGGCTCTGAGGCCTCCACTCG s panTro4.chr17 158288 21 + 82630442 CAGCTCTGAGGCCTCCACTCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55067 21 + 73212453 CAGCTCTGAGGCCTCCACTCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118303 21 - 81552678 CAGCTCTGAGGCCTCCACTCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83741 21 + 80904711 CGGCTCTGAGGCCTCCACTCG i rheMac3.chr16 C 0 I 38 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e macFas5.chr16 84600 0 + 80997621 C a score=9455.000000 s hg38.chr17_GL383563v3_alt 171266 19 + 375691 GTGAGACAATAGACCCAAG s panTro4.chr17 158309 19 + 82630442 CTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55088 19 + 73212453 ATGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 T 450 s nomLeu3.chr19 118324 19 - 81552678 GTGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=18310.000000 s hg38.chr17_GL383563v3_alt 171285 41 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGAAC s panTro4.chr17 158328 41 + 82630442 GACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54657 41 + 73212453 CACATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGACC i ponAbe2.chr17 T 450 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 C 0 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=20423.000000 s hg38.chr17_GL383563v3_alt 171326 45 + 375691 CAAGCACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACC s panTro4.chr17 158369 45 + 82630442 AAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54698 45 + 73212453 CAAGCGCAACAGCTCTGAGGCCTCCACTCACTGAGATAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=43655.000000 s hg38.chr17_GL383563v3_alt 171371 94 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACATCAGCTCTCAGGCCTCCACTCGGTGAGACAATAGACCCAAG s panTro4.chr17 158414 94 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACACAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54743 94 + 73212453 CAAGTGCGTCAGCTCTGAGGCCTCCATTCGGTGAGACAATAGACCCAAGCACATCAGCTCTGAGGCCTCCACTTGATGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=18831.000000 s hg38.chr17_GL383563v3_alt 171465 41 + 375691 CACATCAGCTCTCAGGCCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158508 41 + 82630442 CACAACAGCTCTGTGGCCTCCACTCAGTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54837 41 + 73212453 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 41 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=600.000000 s hg38.chr17_GL383563v3_alt 171506 1 + 375691 C s panTro4.chr17 158549 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54878 1 + 73212453 C i ponAbe2.chr17 C 0 I 440 s nomLeu3.chr19 118294 1 - 81552678 C i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=44622.000000 s hg38.chr17_GL383563v3_alt 171507 93 + 375691 AAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158550 93 + 82630442 AAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGTGCATCAGCTCTGTGGCCTCCACTCACAGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55319 93 + 73212453 AAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGAACAACAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACCCAAG i ponAbe2.chr17 I 440 C 0 s nomLeu3.chr19 118295 93 - 81552678 AGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=23455.000000 s hg38.chr17_GL383563v3_alt 171600 45 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158643 45 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55412 45 + 73212453 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=21341.000000 s hg38.chr17_GL383563v3_alt 171645 44 + 375691 CACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAA s panTro4.chr17 158688 44 + 82630442 CACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAA i panTro4.chr17 C 0 T 720 s ponAbe2.chr17 55457 44 + 73212453 CACATCAGCTCTGAGGCCTCCATTCGGTGAGACAATAGGCCCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 44 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAA i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=600.000000 s hg38.chr17_GL383563v3_alt 171689 1 + 375691 G s panTro4.chr17 158012 1 + 82630442 G i panTro4.chr17 T 720 C 0 s ponAbe2.chr17 55501 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118387 1 - 81552678 G i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=19257.000000 s hg38.chr17_GL383563v3_alt 171690 41 + 375691 CACATCAGCTCTCAGGCCTCCACTCGGTGAGACAATAGACC s panTro4.chr17 158013 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55502 41 + 73212453 AACAACAGCTCTGAGGCCTCCACTCAGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=42692.000000 s hg38.chr17_GL383563v3_alt 171731 90 + 375691 CAAGCACATCAGCTCTCAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCC s panTro4.chr17 158054 90 + 82630442 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55543 90 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGAACAACAGCTCTGAAGCCTCCACTCAGTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 90 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 90 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=41733.000000 s hg38.chr17_GL383563v3_alt 171821 86 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATA s panTro4.chr17 158144 86 + 82630442 CAAGCACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55633 86 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCCCTGAGGCCTCCACTCACTAAGACAATA i ponAbe2.chr17 C 0 T 1250 s nomLeu3.chr19 118294 86 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATA i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=4299.000000 s hg38.chr17_GL383563v3_alt 171907 8 + 375691 GGCCCAAG s panTro4.chr17 158230 8 + 82630442 GGCCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54469 8 + 73212453 GACCCAAG i ponAbe2.chr17 T 1250 C 0 s nomLeu3.chr19 118380 8 - 81552678 GGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=17392.000000 s hg38.chr17_GL383563v3_alt 171915 41 + 375691 CACATCAGCTCTGAGGCCTCCACTCTCTGAGACAATAGACT s panTro4.chr17 158238 41 + 82630442 CACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54477 41 + 73212453 CACGACAGCTCTGAGGCCTCCACTTGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=43058.000000 s hg38.chr17_GL383563v3_alt 171956 90 + 375691 CAAGCACAACAGCTCTGAGGCCTCCACTCTCTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACC s panTro4.chr17 158279 90 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGGACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54518 90 + 73212453 CAAGCGCAACAGCTCTGAGGCCTCCACTCACTGAGACAGTAGACCCAAGTGCAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 90 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 90 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=2215.000000 s hg38.chr17_GL383563v3_alt 172046 9 + 375691 CAAGCGCAT s panTro4.chr17 158369 9 + 82630442 AAAGCACAT i panTro4.chr17 C 0 T 360 s ponAbe2.chr17 54608 9 + 73212453 CAAGTGCAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 9 - 81552678 CAGGTGTAA i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=23244.000000 s hg38.chr17_GL383563v3_alt 172055 44 + 375691 CAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACA s panTro4.chr17 158018 44 + 82630442 CAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACA i panTro4.chr17 T 360 C 0 s ponAbe2.chr17 54617 44 + 73212453 CAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACA i ponAbe2.chr17 C 0 T 225 s nomLeu3.chr19 118303 44 - 81552678 CAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=20175.000000 s hg38.chr17_GL383563v3_alt 172099 41 + 375691 ACAGCTCTGAGACCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158062 41 + 82630442 ACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54436 41 + 73212453 ACAACTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAG i ponAbe2.chr17 T 225 C 0 s nomLeu3.chr19 118347 41 - 81552678 ACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=18805.000000 s hg38.chr17_GL383563v3_alt 172140 41 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAACAGACC s panTro4.chr17 158103 41 + 82630442 CACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54477 41 + 73212453 CACGACAGCTCTGAGGCCTCCACTTGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=44219.000000 s hg38.chr17_GL383563v3_alt 172181 94 + 375691 CAAGCGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGAACAACAGCTCTGAGACCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158144 94 + 82630442 CAAGCACAATAGCTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54518 94 + 73212453 CAAGCGCAACAGCTCTGAGGCCTCCACTCACTGAGACAGTAGACCCAAGTGCAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=20338.000000 s hg38.chr17_GL383563v3_alt 172275 45 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158238 45 + 82630442 CACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54612 45 + 73212453 TGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=19070.000000 s hg38.chr17_GL383563v3_alt 172320 41 + 375691 CACATCAGCTCTGAGTCCTCCACTCACTGAGACAATAGACC s panTro4.chr17 158283 41 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54657 41 + 73212453 CACATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 41 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=10481.000000 s hg38.chr17_GL383563v3_alt 172361 23 + 375691 CAAGCACAACAGCTCTGAGGCCG s panTro4.chr17 158324 23 + 82630442 CAAGGACAACAGCTCTGAGGCCT i panTro4.chr17 C 0 T 225 s ponAbe2.chr17 54698 23 + 73212453 CAAGCGCAACAGCTCTGAGGCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 23 - 81552678 CAGGTGTAACAGCTCTGAGGCCT i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=10693.000000 s hg38.chr17_GL383563v3_alt 172384 22 + 375691 CCACTCACTGAGACAATAGACC s panTro4.chr17 158122 22 + 82630442 CCACTCACTGAGACAATAGACC i panTro4.chr17 T 225 C 0 s ponAbe2.chr17 54721 22 + 73212453 CCACTCACTGAGATAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118317 22 - 81552678 CCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=3490.000000 s hg38.chr17_GL383563v3_alt 172406 12 + 375691 CAAGCACATCAG s panTro4.chr17 158144 12 + 82630442 CAAGCACAATAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54743 12 + 73212453 CAAGTGCGTCAG i ponAbe2.chr17 C 0 T 315 s nomLeu3.chr19 118294 12 - 81552678 CAGGTGTAACAG i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=43215.000000 s hg38.chr17_GL383563v3_alt 172418 82 + 375691 CTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG s panTro4.chr17 158156 82 + 82630442 CTCTGAGGCCTCTACTCGGTGAGACAATAGACCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54440 82 + 73212453 CTCTGAGGCCTCCACTCGGTGAGACAATAGACCCAAGCACGACAGCTCTGAGGCCTCCACTTGGTGAGACAATAGGCCCAAG i ponAbe2.chr17 T 315 C 0 s nomLeu3.chr19 118306 82 - 81552678 CTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=20961.000000 s hg38.chr17_GL383563v3_alt 172500 45 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158238 45 + 82630442 CACATCAGCTCTGAGGCCCCCACTCAGTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54522 45 + 73212453 CGCAACAGCTCTGAGGCCTCCACTCACTGAGACAGTAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=21698.000000 s hg38.chr17_GL383563v3_alt 172545 45 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158283 45 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54567 45 + 73212453 TGCAACAGCTCTGAGGCCTCCAATCGGTGAGACAATAGACCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=18448.000000 s hg38.chr17_GL383563v3_alt 172590 41 + 375691 AACATCAGCTCTGAGTCCTCCACTCACTGAGAGAATAGACC s panTro4.chr17 158328 41 + 82630442 GACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54612 41 + 73212453 TGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=26513.000000 s hg38.chr17_GL383563v3_alt 172631 57 + 375691 CAAGCACATCAGCTCTCAGGCCTCCACTCGGTGAGACAATAGGCCCAAGCACAACAG s panTro4.chr17 158369 57 + 82630442 AAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACAACAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 54653 57 + 73212453 CAAGCACATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGACCCAAGCGCAACAG i ponAbe2.chr17 C 0 I 529 s nomLeu3.chr19 118294 57 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAG i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=18871.000000 s hg38.chr17_GL383563v3_alt 172688 37 + 375691 CTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158426 37 + 82630442 CTCTGAGGCCTCCACTCACTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55239 37 + 73212453 CTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i ponAbe2.chr17 I 529 C 0 s nomLeu3.chr19 118351 37 - 81552678 CTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=17816.000000 s hg38.chr17_GL383563v3_alt 172725 41 + 375691 CGCATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGA-CC s panTro4.chr17 158463 41 + 82630442 AACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGA-CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55276 42 + 73212453 CGCATCAGCTCTGAGGCCTCCACTCGATGAGACAATAGGCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118298 41 - 81552678 TGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGG-CC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=19599.000000 s hg38.chr17_GL383563v3_alt 172766 43 + 375691 CAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGA s panTro4.chr17 158504 43 + 82630442 CAAGCACAACAGCTCTGTGGCCTCCACTCAGTGAGACAATAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55318 43 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGG i ponAbe2.chr17 C 0 I 359 s nomLeu3.chr19 118294 43 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGG i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=26554.000000 s hg38.chr17_GL383563v3_alt 172809 51 + 375691 CCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158547 51 + 82630442 CCCAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55720 51 + 73212453 CCCAAGAACAACAGCCCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i ponAbe2.chr17 I 359 C 0 s nomLeu3.chr19 118337 51 - 81552678 CCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 C 0 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=17411.000000 s hg38.chr17_GL383563v3_alt 172860 41 + 375691 CACAACAGCTCTGAGGCCGCCACTCACTGAGACAATAGACC s panTro4.chr17 158598 41 + 82630442 TGCATCAGCTCTGTGGCCTCCACTCACAGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55771 41 + 73212453 CACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 41 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCC i nomLeu3.chr19 T 45 T 90 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=21606.000000 s hg38.chr17_GL383563v3_alt 172901 45 + 375691 CAAGCACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACC s panTro4.chr17 158639 45 + 82630442 CAAGCACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55812 45 + 73212453 CAAGCACATCAGCTCTGAGGCCTTCACTCGGTGAGACAATAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 45 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCC i nomLeu3.chr19 T 90 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=45200.000000 s hg38.chr17_GL383563v3_alt 172946 94 + 375691 CAAGCGCAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG s panTro4.chr17 158684 94 + 82630442 CAAGCACATCAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAGCACATCAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACACAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55857 94 + 73212453 CAAGAACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGGCCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118294 94 - 81552678 CAGGTGTAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGGCCCAAGAACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=22696.000000 s hg38.chr17_GL383563v3_alt 173040 45 + 375691 CACAACAGCTCTGAGGCCTCCACTCAGTGAGACAATAGGCCCAAG s panTro4.chr17 158778 45 + 82630442 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAATAGACCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55951 45 + 73212453 CACAACAGCTCTGAGGCCTCCACTCGGTGAGACAATAGACTCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 45 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAATAGGCCCAAG i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=15993.000000 s hg38.chr17_GL383563v3_alt 173085 36 + 375691 CACAACAGCTCTGAGGCCTCCACTCACTGAGACAAT s panTro4.chr17 158823 36 + 82630442 AACAACAGCTTTGAGGCCTCCACTCACAGAGACAAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 55996 36 + 73212453 AGCATCAGCTCTGAGGCCTTCACTCGGTGAGACAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118343 36 - 81552678 AACAACAGCTCTGAGGCCTCCACTCAGGGAGACAAT i nomLeu3.chr19 T 45 T 45 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=15144.000000 s hg38.chr17_GL383563v3_alt 173121 28 + 375691 AGGCCCAAGAACAACAGCTCTGAGGCCT s panTro4.chr17 158859 28 + 82630442 AGACCCAAGCACAACAGCTCTGAGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56032 28 + 73212453 AGGCCCAAGAACAACAGCTCTGAGGCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118334 28 - 81552678 AGGCCCAAGAACAACAGCTCTGAGGCCT i nomLeu3.chr19 T 45 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15658600 30 - 61074082 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=9171.000000 s hg38.chr17_GL383563v3_alt 173149 15 + 375691 CCACTCGCTGAGACA s panTro4.chr17 158887 15 + 82630442 CCACTCGGTGAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56060 15 + 73212453 CCACTCGGTGAGACA i ponAbe2.chr17 C 0 I 2 s nomLeu3.chr19 118362 15 - 81552678 CCACTCAGGGAGACA i nomLeu3.chr19 C 0 I 2 s canFam3.chr9 15658630 15 - 61074082 CCTTTTAATGAGGCA i canFam3.chr9 I 30 C 0 e mm10.chr11 75835233 2318 + 122082543 I e calJac3.chrUn_GL286409 897944 0 - 1291538 C e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=1365.000000 s hg38.chr17_GL383563v3_alt 173164 1 + 375691 A s panTro4.chr17 158902 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56077 1 + 73212453 A i ponAbe2.chr17 I 2 C 0 s nomLeu3.chr19 118379 1 - 81552678 A i nomLeu3.chr19 I 2 C 0 s calJac3.chrUn_GL286409 897944 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15658645 1 - 61074082 A i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e chlSab2.chr16 86574 35 + 75148670 I e papAnu2.chr16 91452 0 + 74645514 C e rheMac3.chr16 83762 38 + 80904711 I e macFas5.chr16 84600 0 + 80997621 C a score=30069.000000 s hg38.chr17_GL383563v3_alt 173165 21 + 375691 GGCCCAAGGCAATGCTCTGCA s panTro4.chr17 158903 21 + 82630442 AGCCCAAGGCAATGCTCTGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56078 21 + 73212453 GGCCCAAGGCAATGCTCTGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118380 21 - 81552678 GGCCCAAGGCAATGCTCTGCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 84600 20 + 80997621 GGCCCAAGGC-CTGCCCTGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 91452 20 + 74645514 GGCCCAAGGC-CTGCCCTGCG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897945 21 - 1291538 GGCCCAAGGCGATGCTCTGTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15658646 12 - 61074082 -------AGCA--GCTCTGCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e chlSab2.chr16 86574 35 + 75148670 I e rheMac3.chr16 83762 38 + 80904711 I a score=7461.000000 s hg38.chr17_GL383563v3_alt 173186 5 + 375691 GGGAT s panTro4.chr17 158924 5 + 82630442 GGGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56099 5 + 73212453 GGGAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118401 5 - 81552678 GGGAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 84620 3 + 80997621 --GGT i macFas5.chr16 C 0 I 5 s papAnu2.chr16 91472 3 + 74645514 --GGT i papAnu2.chr16 C 0 I 5 s chlSab2.chr16 86609 5 + 75148670 GGGGT i chlSab2.chr16 I 35 C 0 s calJac3.chrUn_GL286409 897966 5 - 1291538 GGGAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15658658 1 - 61074082 ----T i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e rheMac3.chr16 83762 38 + 80904711 I a score=2583140.000000 s hg38.chr17_GL383563v3_alt 173191 884 + 375691 GTGGGGA------CAGTCAGA-------GCTGACCCTTagggagcattccaggcagtttccatagacacattcattgaagtttcagaacaattctgtgaggtaggaaacagcattacccccatttcacaggcaagaaaacgggggcacgtgcccaagtt-gtaagtagaagagcc-ggattctcatcctggcaggctggctccgtggctcctgctcacaacc-ctctgattttactgCAAGAATTGAACTGGAAGCCAGCAGGCCTGGGCTCTCATCCCAGTTCATCCAGTAACGCACAGTGCAGTCTCACAAATGCGGAAGGGAACCAGACGGATGGGGCTGGAATCCCAGCA-AGGGGAGGTGAGGATGTTGTCACAGTGAACATGCACTGTGGGagaaactctcttttctggactaaatggaaaccgtatttggctgggtaatcaacagtgagagtcataatacaggatatagctaccctttaaacattctattttaatttttaacacagaaatgtacatccattcaccaatcttttgatgccaggcttgggtgcttctgcaagat-tggcccacacagtctctcaggtataaactgcacccgtattgcattgtctgtgaccccaggtgc--agtttctctgaattgcagcgggacccacagaccctggccaagcaggacaactgcagaatcctcctt----------------------t----ttccatttcttcctcttggtttccacagttgtcctgcccacccctaattccatatatttttataaagcaagt-tgcctccatcaatactttccagggct--------------gggtgtggtggctcacgcctgtaatcccagcactttgggagggcaaggcgggtggatcacttgaggtcaggagctcaagaccaggctggctaacatagtgaaac s panTro4.chr17 158929 884 + 82630442 GTGGGTA------CAGTCAGA-------GCTGACCCTTagggagcattccaggcagtttccatagacacattcactgaagtttcagaacaattctgtgaggtaggaaacagcattacccccatttcacaggcaagaaaacgggggcacgtgcccaagtt-gtaagtagaagagcc-ggattctcatcctggcaggctggctccgtggctcctgctcacaacc-CTCTGATTTCACTGCAGGAATTgaactggaagccagcaggcctgggctctcatcccagttcatccagtaacgcgcagtgcggtctCACAAATGCGGAAGGGAACCAGACGGATGGGGCTGGAATCCCAGCA-AGGGGAGGTGAGGATGCTGTCACAGTGAACACGCACTGTGGGagaaactctcttttctggactaaatggaaaccgtatttggctgggtaatcaacagtgagagtcataatacaggatatagctaccctttaaacattctattttaatttttaacacagaaatgtacatccattcaccaatgttttgatgccaggcttgggtgcttctgcaagat-tggcccacacagtctctcaggtataaactgcacccgtattgcattgtctgtgaccccaggtgc--agtttctctgaattgcagcgggacccacagaccctggccaagcaggacaactgcagaatcctcctt----------------------t----ttccatttcttcctcttggtttccacagttgtcctgcccacccctaattccatatatttttataaagcaagt-tgcttccatcaagactttccagggct--------------gggtgtggtggctcacgcctataatcccagcactttgggagggcaaggcgggtggatcacttgaggtcaggagctcaagaccaggctgaccaacatagtgaaac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56104 882 + 73212453 GTGGGGA------CAGTCAGA-------GCTGACCCTTagggagcattccctgcactttccaaagatacattcacttaagtttcagaacaactctgtgaggtaggaaacagcattaaccccatttaacaggcaagaaaataggggcacgtgcccaagtt-gtaaatagaagagcc-ggattctcatcccggcaggctggctccgcggcccctgctcacaacc-CTCTGATTTCACTGCAAGAATTGAACTGGGAGGCAGCAGGC--AGGCTCTCATCCCAGTTCATCCAGTAATGCACAGTGGGGTCTCGCAAATGCGGAAGGGAACCAGACAGATGGGGCTGGAATCCCAGCA-AGTGGAGGTGAGGGTGTTGTCACAGTGAACACCCACCGTGGGagaaactctcttttctggactaaatggaaaccgtatttggctgggtaatcaacagtgagagtcataatacaggatatagctaccctttaaacattctattttaattttaaacacagaaatgtacatccatttgccaatctttcgatgccaggcttgggtacttctgcaagat-tggcccacacagtctctcaggtataaactgcacccgtattgcattgtctgcgaccccaggtgc--agtttctctgaattgcagcgggacccacagaccctggccaagcaggacaactgcagaatcctcctt----------------------t----ttccgtttcttcctcttggtttccacggttgtcctgcccgcccctaattccatagatttttataaagcaagt-tgcttccatcaagactttccagggct--------------gggcgtggtggctcacgcctataatcccagcacttggggagggcaaggcgggtggatcacttgaggtcaagagctcaagagcagtctggccaacatagtgaaac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 118406 881 - 81552678 GCGGGGA------CAGTCAGA-------GCTGACCCTTAGGGAGAAttccaggcactttccatagacacattcactgaagtttcagaacaactctgtgaggtaggaaacagcattacccccatttcactggcaagaaaacgggggcatgtgcccaagtt-gtaagtggaagagcc-ggattctcaacccggcaggctggctccgcggcccccgctcacaacc-CTCTGATTTCACTGCAAGAATTCAactgggagccagcaggcctgggctctcatcccagttcatccagtaacgcacagtggggtctcgcaaatGCGGAAGGGAACCAGACGGATGGGGCTGGAATCCCAGCA-AGGGGAGGTGAGGATGTTGTCACAGTGAACACCCACCGTGGGagaaactgtcttttctcgactaaatggaaaccgtatttggctgggtaatcaacagtgagagtcataatacaggatatagctaccctttaaacattctattttaattttaaacacagaaatgtacatccattcgccaatctttcgatgccaggcttgggtgcttctgcgagat-tggctcacacagtctgtcagatataaactgcacccgtagtgcattgcctgcgaccccaggtgc--agtttctctgaattgcagcgggacccacagaccctggccaagcgggacaactgcagaa---tcctt----------------------t----ttccatttcttcctcttggttttcacagttgtcctgtccacccctaattccatagatttttataaagcaagt-tgcttccatcaagactttccagggct--------------gggtgcggtggctcatgcctgtaatctcagcactttgggagggcaaggcgggtggatcacttgaggtcaggagctcaagaccaggctggccaacataatgaaac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 83800 849 + 80904711 GTGGGGA------GAGTCCGA-------GCTGACCCTCGGGGAGCACtccaggcactttccacagacacattcaccgaagcttcagaacaactct--gaggtcgggaacagcacgacccccatttcacaggcaagaaaac-ggggcacacgcccaagtt-gt-agtggaagagccgggagtctcctcccagccggctggttccacagaccctgctcaccacC-CTCTGATTTCACTGCAAAAacggaactgggagccagcaggcctgggctctcatcccagctcatccagtaacgcacagtggggcctcgcaaatGCGGAAGGGAGCCAGACGGACGGGGCTGGAATCCCAGCA-AGGGGAGGCGAGGATATTGTCACAGTGAACACCTACCG-------------------TGGACTAAATggaaaccgtatttggctgggtaatcaacagtgggagtcataatacaggatacagctatcctttaaacgttctatttta------aacacagaaatgtacatccattcaccaatctctcgatgccaggcttgggtgcttctgcaagac-tggtccgcacagtctctcaggtataaactgcacacgtattgcactgtctgcgaccccagttgc--agtttctctgaattgcagcgggacccacagaccctggcaaagcaggacaactgcagaatcctgctt----------------------t----ttccatttcttcctcttggttctcacacttgtcctg-------ctaattccatagatttttataaagcaagt-tgcttccctcaaaactttccggggtg--------------gggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcacttgaggtcaggagttcaagaccaggctggccaatagagtgaaac i rheMac3.chr16 I 38 C 0 s macFas5.chr16 84628 863 + 80997621 GTGGGGA------GAGTCCGA-------GCTGACCCTCGGGGAGCACtccaggcactttccacagacacattcaccgaagcttcagaacaactct--gaggtcgggaacagcacgacccccatttcacaggcaagaaaac-ggggcacacgcccaagtt-gt-agtggaagagccgggagtctcctcccagccggctggttccacagaccctgctcaccacC-CTCTGATTTCACTGCAagaacggaactgggagcgagcaggcctgggctctcatcccagctcatccagtaacgcacagtggggcctcgCAAATGCGGAAGGGAGCCAGACGGACGGGGCTGGAATCCCAGCA-AGGGGAGGCGAGGATATTGTCACAGTGAACACCTACCG-------------------TGGACTAAATggaaaccgtatttggctgggtaatcaacagtgggagtcataatacaggacacagctaccctttaaacgttctatttta------aacacagaaatgtacatccattcaccaatctctcgatgccaggcttgggtgcttctgcaagac-tggtccgcacagtctctcaggtataaactgcacacgtattgcactgtctgcgaccccagttgc--agtttctctgaattgcagcgggacccacagaccctggcaaagcaggacaactgcagaatcctcctt----------------------t----ttccatttcttcctcttggttctcacacttgtcctg-------ctaattccatagatttttataaagcaagt-tgcttccctcaaaactttccggggtgaggcgcggtggctcaggcgcggtggctcacgcctgtcatcccagcactctgggaggccgaggcgggtggatcgcttgaggtcaggagttcaagaccaggctggccaatagagtgaaac i macFas5.chr16 I 5 C 0 s papAnu2.chr16 91480 876 + 74645514 GTGGGGA------GAGTCCGAGCTGAGCGCTGACCCTCGGGGAGCACTCCAGGCACTTTCCACAGACACATTCACCGAAGCTTCAGTACAACTCTGGGAGGTAGGGAACAGCACGACCCCCATTTCACAGGCAAGAAAAC-GGGGCACACACCCAAGTT-GT-AGTGGAAGAGCCAGGAGTCTCCTCCCAGCAGGCTGGTTCCACAGACCCTGCTCACCACC-CTCTGATTTCACTGCAAGAACGGAACTGGGAGCCAGCAGGCCTGGGCTCTCATCCCAGCTCATCCAGTAACGCACAGTGGGGCCTCGCAAATGCGGAAGGGAGCCAGACGGACGGGGCTGGAATCCCAGCA-AGGGGAGGCGAGGATATTGTCACAGTGAACACCTACCGT-GGAGAAACTCTGTTTTCTGGACTACATGGAAACCGTATTTGGCTGGGTAATCAACAGTGGGAGTCATAATACAGGATATAGCTACCCTTTAAACGTTCtatttta------aacacagaaatgTACATCCATTCACCAATCTCTCGATGCCAGGCTTGGGTGCTTCTGCAAGAC-TGGTCCGCACAGTCTCTCAGGTATAAACTGCACACGTATTGCACTGTCTGCGACCCCAGTTGC--AGTTTCTCTGAATTGCAGCGGGACCCACAAACCCTGGCAAAGCAGGACAACTGTAGAATCCTCCTT----------------------T----TTCCGTTTCTTCCTCTTGGTTCTCACACTTGTCCTG-------CTAATTCCATAGATTTTTATAAAGCAAGT-TGCTTCCCTCAAAACTTTCCggggtg--------------gggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggagctcaagaccaggctggccaacacagtgaaac i papAnu2.chr16 I 5 C 0 s chlSab2.chr16 86614 876 + 75148670 GCGGGGA------GAGTCCGA-------GCTGACCCTCGGGGAGCACtccaggcactttccacagacacattcaccgaagcttcagaacaacactgtgaggtaggaaacagcacgacccccatttcacaggcaagaaaac-ggggcacgcgcccaagtt-gt-agtggaagagccgggagtctcctcccagccggctggttccacagaccctgctcaccacC-CTCTGATTTCACTGCAagaacggaactgggagccagcaggcctgggctctcatcccagttcatccagtaacgcacagtggggcctcgCAAATGCGGAAGGGAGCCAGACGGACGGGGCTGGAATCCCAGCA-AGGGGAGGCGAGGATCTTGTCACAGTGAACACCTACCGT-GGagaaactctgttttctggactaaatggaaaccgtatttggctgggtaatcaacagtgggagtcataatacaggatatagctaccctgtaaacgttctatttta------aacacagaaatgtacatccattcaccagtctctcgatgccaggcttgggtgcttctgcaagac-tggtccgcacagtctctcaggtataaactgcccacgtattgcattgtctgcgaccccagttgc--agtttctctgaattgcagcgggacccacagaccctggcaaagcaggacaactgcagaatcctcctt----------------------t----ttccgtttcttcctcttggttctcacacttgtcctgcccacccctaaatccatagatttttataaagcaaat-tgcttccatcaagactttccagggtg--------------cggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtggatcacttgaggtcaggagctcaagaccaggctggccaacatggtgaaac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 897971 874 - 1291538 GAGGGTG------GCGTCAGG-------CCTGA-CCTGAGGGAGCATCccaggcacgttccacagacatgttcaccgaaacttcagaacaactct--gaggtaggaaaaagcattacccccattccacgggcaaaacaacaggggcacaCGCCCA--------AGGGGAAGAGCCGGGATCCTCCTCACAGCAGGC-------------CATGCTCACAGTC---CTGATTTCACTggaagaactgaagtgggaggtggcaagcctgggctcttatcccagttcatccagaaactcgaagtggggtcttgcaaatGTGGAAGGGAGCCAGAAGGATGGGGCTGGAATCCCAGCA-GGGGGAGGCGAGGATGTTGCCACAGTGGACACCCACCGTGGGAGAAACTC--TTTTCTGGGCTAAATCG-GACCATGTttggctggctaatcaacagtg-gagtcatgatgcaggatgcagccacctgttaaacgttctattttcattttaaacacagaaatgcaca-ccattcaccaatctttcgatgccaggcttgggtgctcctgcaagat-tggcccacgcggcctcctgtgtataaagtgcac-cgtgctgtgttgtcttcga-cccagttgc--agtttctctgaatttcagcaggacccacagaccctagcgaaggaggacaactgcagaatctccctttctctgtgtgctgtgaggaggat----ctccatctcttcctttttgttttcacagttgtcctgcccatccctaattccacagatttttataaagcaagt-tgcttccactaagactttccagggcc--------------gggcacggtggctcatg-ctgtaatcccagcactttggaaggccaagatgagtggatcgcctgaggtcaggagttcaagaagagcctggccaacatggtggaag i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15658659 775 - 61074082 Gtaacaaaatttccagtcctc-------gccagcccttatgaagcactcctggcactctacatatgctagcttgctgaagcctcagaacatccct-------ggaagacaggactgtgctcattttacaggtgaggaacccaaagcacttgcccaaggtagtaagtgggagagctcggacgattaccctggca-gctggctctacaccttgtgtttgtaaccactgtgATTTTGCTGGAAGGAATGAAGTGGGG------AGGCCTGGGCCCTCATTTCAGTTCGTCCAGGAATTCACAACAGGGCCTTGTGAATGCAGAGGGGAGCCAGACTGATGGGGCTGGTGTTCCAGGAGAGGGGAGGGCAGGGAGCTCTCACGGGGAACTCCCACTGTGgtagaaatcttcttttctggactaaatgg-gaccatatttggctggttggtcaatcatgagagtcattatacaggatgtattaatagattaaacatcctatattgattttaagcatagacatgtacatccattcaccaatcctctgatggagggctttg-----------agatagggcccacatggtctttcatgtccgagctgcacccacattgcaccgtctgtgatccctg-tgcttagtgtctctaaactgcagcacag--cgtagacactagcaaat--------ccctagaatccctctc----------------------tgctgttccatttctttctcttgctttttacagttgtcctgcccacacctggtccaatagctttt--ttaagcaagtaggcttctatcaagactttccaaagtc---------------------------------------------------------------------------------------------------ctggt---tttaatgaaac i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I a score=447424.000000 s hg38.chr17_GL383563v3_alt 174075 163 + 375691 cccatctctactaaaaatacaaaagtaagcttggcgttgtga-tgggcacgtgtactcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagattgcgccactgcactctagcctgggcgacagagcaa s panTro4.chr17 159813 162 + 82630442 cccatctctactaaaaatacaaaa-taagcttggcattgtga-caggcacctgtactcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagattgcgccactgcactctagcctgggcgacagagcaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 56986 163 + 73212453 gccatctctactaaaaatacaaaaataagcttggcgttgtga-cgggcacctgtaatcccaggtactcgggaggctaaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagattgcgccactgcattccagcctgggagacacagcga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 119287 163 - 81552678 cccatctctattaaaaatacaaaaataagcttggcgttgtga-cgggcacctgtactcccagctactcaggaggctgaggcaggagaatcagttgaacctgtgaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggctacagagcga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 84649 163 + 80904711 cccgtctctactaaaaatacaaaaataagcttggcgttgtggccgggctcctgtaatcccagctattcgggaggctgaggcaggagaatcacttgaacatgtgagatggaggttgcagtgagctgagatcgcaccattgc-ctcccgcccgggcgacagagcga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 85491 163 + 80997621 cccgtctctactaaaaatacaaaaataagcttggcgttgtggccgggctcctgtaatcccagctattcgggaggctgaggcaggagaatcacctgaacacgtgagatggaggttgcagtgagctgagatcgcaccattgc-ctccagcctgggcgacagagcga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 92356 162 + 74645514 cccgtctctgctaaaaatacaaaaataagcttgGTGttgtgg-cgggctcctgtaatcccagctattcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagctgagatcgcaccattgc-ctccaacctgggtgacagagcga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 87490 163 + 75148670 cccatctcttctaaaaatacaaaaataagcttggcgttgtgg-cgggctcctgtaatcccagttattcgggaggctgaggcaggagaatcacttgaacccgtgagatggaggttgcagtgagctgagatcacgccattgcactccagcctgggcgacagagcaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 898845 163 - 1291538 cctgtctctactaaaaacacaaaaattagctggacatggtgg-caggcacctgtagtctcagctactcaggaggctgaggcaggagaagcacttgaacccgggaaggagaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagaggga i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15659434 0 - 61074082 C a score=1042208.000000 s hg38.chr17_GL383563v3_alt 174238 365 + 375691 gactctgtctcaaaaaag-aaaaa------------aaaaaaaaagactttccaaagtctcggttttcatgaaacaat--tgtctgttttctgcctctttccatcaattcgcataacatttaattaagtgatatcattgcaataccaagtacaacagcacaggaaggtct-ggatcaagggtaa-cagctctcataggcgagaaactcagcagatgggacaggagtcat-gggcgCCTGTCAGCGTTTTCCTTGGGGAATGCAAAACACTGGTGGTTACGGAGGAAGGTTAGGGCGGGttg-agctcttatgccaggcactttgctgggcc----cttagtgag---cat-------cgtcttccaaacaaccctg---------AGCCG--CTGGTGAGAGGTAAGAC s panTro4.chr17 159975 375 + 82630442 gactctgtctcaaaaaagaaaaaa------------aaaaaaaaagactttccaaagtctcggttttcatgaaacaat--tgtctcttttctgcctctttccatcaattcgcataacatttaattaagtgatatcattgcaataccaagtacaacagcacagaaaggtct-ggatcaagggtaa-cagctctcacaggcgagaaactcagcagatggggcaggagtcag-gggcgCCTGTCAGCGTTTTCCTTGGGGAATGCAAAACGCTGGTGGTTACGGGGGAAGGTTAGGGCGGGTTG-AGCTCTTATGCCTGGCACTTTGCTGGGCC----CTTAGTGAG---CAT-------CGTCTTCCAAACAACCCTGAGCCATGGCAGCCG--CTGGTGAGAGGTAAGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57149 372 + 73212453 gactctgtctcaaaaaag----aa------------aaaaaaaaagactttccaaagtctcggttttcatgaaacaat--tgtctcttttctgcctctttccgtcaatccgcataacatttaattaagtgatatcattgcaataccgagtacaacagcacacaaaggtct-ggatcaagggtaaccagctctcacaggcgagaaactcagcagatggggcaggagtcag-gggcgCCTATCAGGGTTTTCCTTGGGGAATGCAAAACGCTGGTGGTTACGGAGGAAGGTTAGGGCGGGttg-agctcttatgccaggcactgtgctgggcc----cttagtgag---cat-------cgtcttccaaacaaccctgAGCCACGGTAGCCG--CTGGTGGGAGGTAAGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 119450 374 - 81552678 gactctgtcgcaaaaaag----aa------------aaaaaaaaaaaagttccaaagtctcagttttcatgaaacaattctgtctcttttctgcctctttccgtcaattcacgtaacatttaattaggtgatatcattgcaatactgagtacaacagcacagaaaggcct-ggatcaagggtaaccagctctcacaggcgagaaactcagaagatggggcaggagtCAG-GGGTGCCTGTCAGGGTTTTCCTTGGGGAATGCAAAACGCTGGTGGTTACGGAGGAAGGTTAGGGCGGGttg-agctcttatgccaggcactgtgctgggcc----cttagtggg---cat-------catcttccaaacaactgtgaggcatggtaCCCG--CTGGTGGGAGGTAAGAC i nomLeu3.chr19 C 0 M 165 s rheMac3.chr16 84812 378 + 80904711 gactccgtctcaaacaaa----ca------------aacaaaaacgactttccaaagtctcagttttcatgaaacaattctgtctcttttacaactctttccgtcaatttgcataacatttaattaagtgagatcattgcggtaccaagtataactgcacagaaaggtct-ggatcaagggtgaccagctctcacaagtgagacactcagcagatggg-caggagtCA--GGGTGCCTGTCAGGGTTTTCCTTGGGGAATGCAAAACGCTGGTGCTTACGGAGGAAGGTTAGGGTGGGttg-agctcttatgccaggcactgtgctgggcc----ctgagtgc----catcttcctccgtcttccaaacagccctgAGCCATGGTACCCG--CTGGTGGGAGATAAGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 85654 378 + 80997621 gactccgtctcaaacaaa----ca------------aacaaaaacgactttccaaagtctcagttttcatgaaacaattctgtctcttttacaactctttccgtcaatttgcataacgtttaattaagtgagatcattgcagtaccgagtataactgcacagaaaggtct-ggatcaagggtgaccagctctcacaagtgagacactcagcagatggg-caggagtCA--GGGTGCCTGTCAGGGATTTCCTTGGGGAATGCAAAACGCTGGTGCTTACGGAGGAAGGTTAGGGCGtgttg-agctcttatgccaggcactgtgctgggcc----ctgagtgc----catcttcctccgtcttccaaacagccctgAGCCATGGTACCCG--CTGGTGGGAGATAAGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 92518 386 + 74645514 gactccatctcaaacaaa----ca----aacaaacgaacaaaaacgACTTTCCAAAGTCTCAGTTTTCATGAAACAATTCTGTCTCTTTTACAACTCTTTCCGTCAATTTGCATAACATTTAATTAAGTGATATCATTGCAATACCGAGTACAACTGCACAGAAAGGTCT-GGATCAAGGGTAACCAGCTCTCACAAGTGAGAAACTCAGCAGATGGG-CAGGAGTCA--GGGTGCCTGTCAGGGTTTTCCTTGGGGAATGTAAAACGCTGGTGTTTATGGAGGAAGGTTAGGGCGGGTTG-AGCtcttatgccaggcactgtgctgggcc----ctgagTGC----CATCTTCCTCCGTCTTCCAAACAGCCCTGAGCCATGGTACCCG--CTGGTGGGAGATAAGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 87653 394 + 75148670 gactccatctcaaacaaa----caaacaaacaaacgaacaaaaacgactttccaaagtctcagttttcatgaaacaattctgtctcttttacgactctttccgtcaatttgcataacatttaattaagtgatatcattgcaataccgagtacaactgcacagaaaggtct-ggatcaagggtaacaagctctcacaagtgagaaacgcagcagatggg-caggagtCA--GGGTGCCTGTCAGGGTTTTCCTTGGGGAATGCAAAACGCTGGTGCTTACAGAGGAAGGTTAGGGCGGGttg-agctcttatgccaggcactgtgctgggcccttactgagcgc----catcttcctccgtcttccaaacagccctgAGCCATGGTACCCG--CTGGTGGGAGATAAGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 899008 380 - 1291538 gacaccatcttaaaaaaa----aa------------aaaaaaaaagactttccaaagtctcggttttcatgaaactattctgtctcttttctgactct----gtcaattcgcataacatttatttaagtgatatcattgcaatgcctagtacaactgcacagaaaggtct-ggatc-agggcaaccagct-tcgcaggcgagaaactcagcagatggggcaggagtCATCAGGTGCCTGTCAGTGTTTTCCTTGGGGAATGCCAAATGCTGGTGGTTCTGGAGGAAGGTTAGGATGGGTTGAAGCTCCtatgccaggcgctgtgctgggtt----cttagtgagcgtcatcctcctcagtcttccagacagccctgAGCCACAGTACCCG--TTGGTGGGAGATGAGAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15659434 301 - 61074082 ---------------------------------------------------------------------------aactctgtc--tttcctggctcttttaatctgtttacataacatttgattatgcgatgtaactctaataacaagttcaacagcacagaaaggtttgggatcaCAGGTAAGGAGCACTCACAGATGACTGACCTGGTGGATGGGGTAAGAGTCA--GTGTGCC---------TTGCTAGTGAGTGTGCAAAATGCTGA---TTACAGAGGGAGCTGAGGAGAGTTTG-GGCACTC-TGCTTGGCACAGTGCCAGGTG----CCCAGATGG---CA--------CTACTGCCAATCAACCCTATGCCACAGGGACCAGTCTGGTGGGAGATGAGAC i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I a score=60700.000000 s hg38.chr17_GL383563v3_alt 174603 24 + 375691 TGGAAACAAAATCCGTCTATACTG s panTro4.chr17 160350 24 + 82630442 TGGAAACAAAATCCGTCTATACTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57521 24 + 73212453 TGGAAACAAAATCCATCTATACTG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 85190 24 + 80904711 CGGAAACAAAATCTGTCTATACTG i rheMac3.chr16 C 0 I 810 s macFas5.chr16 86032 24 + 80997621 CGGAAACAAAATCTGTCTATACTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 92904 24 + 74645514 CGGAAACAAAATCTGTCTATACCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 88047 24 + 75148670 TGGAAACAAAATCTGTCTATACTG i chlSab2.chr16 C 0 I 9 s calJac3.chrUn_GL286409 899388 21 - 1291538 TGGAAAC---ATCGATCTATACCA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15659735 24 - 61074082 TGGAAATAAAATCGGTCTATGCCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e nomLeu3.chr19 119824 165 - 81552678 M a score=704.000000 s hg38.chr17_GL383563v3_alt 174627 3 + 375691 CGG- s panTro4.chr17 160374 3 + 82630442 CGG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57545 3 + 73212453 AGG- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 86056 3 + 80997621 AGG- i macFas5.chr16 C 0 I 1 s papAnu2.chr16 92928 3 + 74645514 AGG- i papAnu2.chr16 C 0 I 6 s calJac3.chrUn_GL286409 899409 3 - 1291538 AGG- i calJac3.chrUn_GL286409 C 0 I 1 s canFam3.chr9 15659759 4 - 61074082 AGAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e chlSab2.chr16 88071 9 + 75148670 I e rheMac3.chr16 85214 810 + 80904711 I e nomLeu3.chr19 119824 165 - 81552678 M a score=6160.000000 s hg38.chr17_GL383563v3_alt 174630 5 + 375691 TGGCT s panTro4.chr17 160377 5 + 82630442 TGGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57548 5 + 73212453 TGGCT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 86060 5 + 80997621 TGGCT i macFas5.chr16 I 1 C 0 s calJac3.chrUn_GL286409 899413 5 - 1291538 AGGCT i calJac3.chrUn_GL286409 I 1 C 0 s canFam3.chr9 15659763 5 - 61074082 TGGCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e nomLeu3.chr19 119824 165 - 81552678 M a score=157363.000000 s hg38.chr17_GL383563v3_alt 174635 294 + 375691 AGCACGTTTCATCTGATCCAGTGAGCCCTTTctggagcagtgtgtagggaagaattcagagaccgcactgaagcttagtgggaggaagtgcctggtcagttatgaaaatccaccatgggcactgggatgaggaaacggtag-----ctgccatgtaGATCC--------AGAGGCTTCTGGAAAAGCCTTCATGGCTCCAGCCTCTGTCACCTTTCAGCTAAGGGAGCCACAGGTCTTGGAA--CAAGCAACCAGA-GGCTGGAGCTGGC--TGCCATGAAGACCTGGAAGACTCTCAACCCTGTGCACCCG s panTro4.chr17 160382 294 + 82630442 AGCACGTTTCATCTGATCCAGCGAGCCCTTTctggagcagtgtgtagggaagaattcagagaccgcatagaagcttagtggggggaagtgcctggtcagttatgaaaatccaccatgggcactggggtggggaaacggtag-----ctgccatgtaGATCC--------AGAGGCTTCTGGAAAAGCCTTCATGGCTCCAGCCTCTGTCACCTTTCAGCTAAGGGAGCCACAGGTCTTGGAA--CAAGCAACCAGA-GGCTGGAGCTGGC--TGCCGTGAAGACCTGTAAGACTCTCAACCCTGTGCACCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57553 287 + 73212453 AGCACGTTTCATGTGATCCAGCGAGCCctttctggagcagtgtgtagggaagaattcagagaccgcattgaagcttagtgggaggaagtgcctggtcagttagggaaatccaccgtgggcactggggcggggaaacggaag-----cTTCCATGTAGATCC--------AGAGGCTTCTGG-AAAGTCTTCATGGCTCCAGCCTCTGTCACCTTTCAGCTAAGGGAGCCACA------GGAA--CAAGCAACCAGA-GGCTGGAGCTGGC--TGCCGTGAAGACCCGGAAGACTCTCAACCCTGTGCACCCC i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 899418 290 - 1291538 AGCAGGTGACATTTGATCCACCAAGCCCTTTctggagtagtgtataggg-agaattccaagaccgcatggaaacttagtgggacaaagtacctggttagttaggaaaatccaccgtgggcactggggtg-ggaaatggtag-----cTTCCATGGAGATCC--------AGAGGCTCCTGG-AAAGCCTTCGTGCATTCAGCCTATGTCACATTTCAAATAAGGGAATCAAGGGTCTTGGAA-CCAAGCAAGCAGA-GGCTGGAGCTGG---TGCCAGGCAGACCCGG-AGAGTCCTAACCCTGTGCACTCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15659768 298 - 61074082 AAGAGGTTTCATCTGATGGTCCGGGCCCCTTGTGGAG-AGTGTGCAGAGGAGGGCCCTGAGACAGCATTAGCAGCCCACAGCAAGGAGAGCCTGATCAGGTAGGGAAATCCACTGTGGGCACTGGAGC--AGCAGTGGCAGGACTTGTGTCATGTAGCTTCTACCCGGAAGGGTCTTTTGG-AAAGCCTTTGTGCCTTCAGCCCATGTCA----------AAAGGAGTCACAGGTCACAGAATTTGGGCAACCAGACAGATGGAGCTGGCCAAACATTTCAGCTCTAGGAGATTGTCAACCGTGTGCTTCCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C e nomLeu3.chr19 119824 165 - 81552678 M a score=1380.000000 s hg38.chr17_GL383563v3_alt 174929 3 + 375691 CAG s panTro4.chr17 160676 3 + 82630442 CAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57840 3 + 73212453 CGG i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 899708 3 - 1291538 CAG i calJac3.chrUn_GL286409 C 0 I 95 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660066 0 - 61074082 C e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C e nomLeu3.chr19 119824 165 - 81552678 M a score=1090.000000 s hg38.chr17_GL383563v3_alt 174932 7 + 375691 CAGAGCG s panTro4.chr17 160679 7 + 82630442 CAGAGCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57843 7 + 73212453 CACGGCA i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660066 0 - 61074082 C e calJac3.chrUn_GL286409 899711 95 - 1291538 I e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C e nomLeu3.chr19 119824 165 - 81552678 M a score=16009.000000 s hg38.chr17_GL383563v3_alt 174939 34 + 375691 GCCAGCACACAGTGGGCGTGCCCCCAACAGAGCG s panTro4.chr17 160686 34 + 82630442 GCCAGCACACAGTGGACGTGCCCCCAGCAGAGCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57850 34 + 73212453 GCCAGCACACAGTGGGTGCGCCCCCAGCAGACTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 119989 34 - 81552678 GTCAGCACACAGTGGGCGCGCCCCCAGCAAAGCA i nomLeu3.chr19 M 165 T 34 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660066 0 - 61074082 C e calJac3.chrUn_GL286409 899711 95 - 1291538 I e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C a score=9705.000000 s hg38.chr17_GL383563v3_alt 174973 44 + 375691 GCCAGCACACAGTAGGTTCACCCCCAGCAGAGAGGCCAGCACAC s panTro4.chr17 160720 14 + 82630442 GCCAGCACACAGTA------------------------------ i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 57884 44 + 73212453 GCCAGCACACAGTGGGTGTGTCCCCAGCAGAGCGGCCAGCACAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 119989 44 - 81552678 GTCAGCACACAGTGGGCGCGCCCCCAGCAAAGCAGCCAGCACAC i nomLeu3.chr19 T 34 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660066 0 - 61074082 C e calJac3.chrUn_GL286409 899711 95 - 1291538 I e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C a score=613.000000 s hg38.chr17_GL383563v3_alt 175017 2 + 375691 AA s ponAbe2.chr17 57928 2 + 73212453 AG i ponAbe2.chr17 C 0 I 931 s nomLeu3.chr19 120033 2 - 81552678 AG i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 899806 2 - 1291538 AA i calJac3.chrUn_GL286409 I 95 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660066 0 - 61074082 C e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C e panTro4.chr17 160734 0 + 82630442 C a score=4403.000000 s hg38.chr17_GL383563v3_alt 175019 11 + 375691 GGGTGCACCcc s panTro4.chr17 160734 10 + 82630442 -GGTGCACCcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 58861 11 + 73212453 GGGtgtgtccc i ponAbe2.chr17 I 931 C 0 s nomLeu3.chr19 120035 11 - 81552678 GGGTGCACCCC i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 899808 11 - 1291538 ccctatgcacc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660066 0 - 61074082 C e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C a score=247302.000000 s hg38.chr17_GL383563v3_alt 175030 258 + 375691 cagcagagcggccagcacacagtaggtgcttcatgaaggtCAGGGGACTCGTGGTCTTGCCTCTTTTCC--------CCTcatgtcctgccagttt---cactcaaatggttcttaaatcagtcacttcctcaccattgtcactgcc-----ttaactcgaggtgtcagctcctccaacctggactcctgtgacaat-gccccaccagggccccacctgcaggcactccactctgtgttctctgcacagccaggggatgctccagcaaaagcaca s panTro4.chr17 160744 258 + 82630442 cagcagagcggccagcacacagtaggtgcttcatgaaggtCAGGGGACTCGTGGTCTTGCCTCTTTTCC--------CCTcatgtcctgccagttt---cactcaaatggttcttaaatcagtcacttcctcaccattgtcactgcc-----ttaactcgaggtgtcagctcctccaacctggactcctgtgacaat-gccccaccagggccccacctgcaggcactccactctgtgttctctgcacagccaagggatgctccagcaaaagcaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 58872 261 + 73212453 cagcagagcggccagcacatagtaggtgcttcatgaaggtCA-GGGACTCGTGGTCTTGCCTCTTTTCT--------CCTCATGTCTTGCCAGTTT---CACTCAAATGGTTCTTAAATCAGTCACTTCCTCACCATTGTCACTGCC-TTGTTTAACTCGAGGTGTCAGCTCCTCCAACCTGGACTCCTGTGACAAT-GCCCCACCAGAGCCTCACCTGCACGCACTCCACTCTGTGTTCTCTGCACAGCCAGGGGATGCTCCAGCAAAAGCACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120046 263 - 81552678 CAGCGGAGCGGCCAGCACACAGTAGGTGCTTCATGAAGGTCAGGGGACTCGTGGTCTTGCCTCTTTTCT--------CCTCATGTCTTGCCAGTTT---CACTCAAATGGTTCTTAAATCGGCTACTTCCTCACCAGTGTCACTGCC-TTGTTTAACGCGAGGTGTCAGCTCCTCCAACCTGAACTCCTGTGACAGTGGCCCCACCAGGGCCCCACCTGCAGGCACTCCACTCCGTGTTCTCTGCACAGCCAGGGGATGCTCCAGCAAAAGCACA i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 899819 258 - 1291538 caacagaggagccagcacacagcaggtgcttcgtgaaGCTCA-GGGATGTGTAGTCTTGCCTCTTTTCT--------CCTCATGTCCTGCCAGTTT---CATAGAAATGGCTCTTGAATTGGCTGCTTCCTCGC---TGTCACTGTC-TTGTTTAACTCGAGCTGTTGGCTCCTACCACCTGGACTCCTGTGAGGAT-GCCCCACCTGGGTCCCACTTGCAGGCACCCCATGGTGTGTTCTCTGCATAGCCAGGGGATGCTCCAACAAGAGCACA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15660066 259 - 61074082 TAGCAGAGCATCTGGTACCTAGTAGGTGCTTCGGGAAGCACTGAGGACTA-----CTTCACTCTTTTCTCCCCCTCACCCCACATTCTGCCAGCTTTGCCTCCTAAACAGTTCTTCAAACAGTGGCCTCCTCACCTTGGCCACAGCCCTTGATTAGCTCAAGAGCTCAGTGTCTCCAGCCTGGACTCCTTCAATAGC-TTCCCACCTGGGCCCCACCTGTGGGCACCTC---------TCTCTGCACAG-AGGGGAATGCTCCAACTAACACACA i canFam3.chr9 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e chlSab2.chr16 88071 9 + 75148670 I e papAnu2.chr16 92931 6 + 74645514 I e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86065 0 + 80997621 C a score=192788.000000 s hg38.chr17_GL383563v3_alt 175288 76 + 375691 gatcCCAGCTTCACCCTCTTTAAAGGTTCCCCATGCCCC-CAGGACCACACTGGGCTCCTGccctttgtctactttt s panTro4.chr17 161002 76 + 82630442 gatcCCAGCTTCACCCTCTTTAAAGGTTCCCCATGCCCC-CAGGACCACACTGGGCTCCTGccctttgtctactttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 59133 76 + 73212453 GATCCCAGCTTCACCCTCTTTAAAGGCTCCCCACAgccc-caggaccacactgggctcctgccctttgtctactttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120309 76 - 81552678 GATCCCCGCTTCACCCTCTTTAAAGGCTCCCCACGCCCC-CAGGACCACACTGGGCTCCTGccctttgtctactttt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 86065 76 + 80997621 GATCCCAGCTTCACCGTCTTTAAAGgctccccatgcccc-caggaccacactgggctcctgccctttgtctacattt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 92937 76 + 74645514 GATCCCAGCTTCACCGTCTTTAAAGGCTCCCCATGCCCC-CAGGACCACACTGGGCTCCTGCCCTttgtctgcattt i papAnu2.chr16 I 6 C 0 s chlSab2.chr16 88080 76 + 75148670 GATCCCAGCTTCACCGTCTTTAAAGGCTCCCCATGCCCC-CAGGACCACACTGGGCTCCTGCCCTTTGTCTACATTT i chlSab2.chr16 I 9 C 0 s calJac3.chrUn_GL286409 900077 76 - 1291538 GGTCCCAGCTTCACCCTCTTTAAAGGTTCCCCACGCCCC-CAGGGCTTCACCGGGCTCCCAGcctttgtctactttt i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15660325 71 - 61074082 AATGCTAGCTT-ACCCGTCTTAGAAGCTCCCTGTAACCTACATGCCCAT-----GGCCCTGTTCTTCATCTACTTCT i canFam3.chr9 C 0 I 707 e mm10.chr11 75835233 2318 + 122082543 I e rheMac3.chr16 85214 810 + 80904711 I a score=176298.000000 s hg38.chr17_GL383563v3_alt 175364 97 + 375691 cctcctgcatcccacgccacctgctgtctcaccctgggtgcctccagcctcctgcggcttgtggctcctgccaccacctcccgctgggactggcttg s panTro4.chr17 161078 97 + 82630442 cctcctgcatcccacgccacctgctgtctcaccctgggtgcctccagcctcctgcggcttgtggctcctgccaccacctcccgctgggactggcttg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 59209 97 + 73212453 ccacctgtatcccacgccacctgctgtctcaccccgggtgcctccagcctcccgcagcttgtggctcctgtcaccacctcccgctgggaccggcttg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120385 97 - 81552678 ccacctgcatcccatgccacccactgtctcaccccgggtgcctccagcctcctgcggcttgtggctcctgccaccacctcccactgggactgacttg i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 86141 74 + 80997621 ccaactgcatcccacgccccccgccgtctcgccctgg-----------------------gtgcctcctgccaccacctcccactgggactggcttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 93013 97 + 74645514 ccaactgcATCCCACGCCCCTCGTTGTCTCGCCCTGGGTGCCTCCAGCCTCCTGCAGCTTGTGCCTCCTGCCACCACCTCCCACTGGGACTGGCTTG i papAnu2.chr16 C 0 M 1332 s chlSab2.chr16 88156 74 + 75148670 CCAACTGCATCCCACGCCCCCCGCCGTCTCGCCCTGG-----------------------GTGCCTCCTGCCACCACCTCCCGCTGGGACTGGCTTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 900153 94 - 1291538 ccagctgcatcccatgccacccagtgtctcccccaag---cttccagcctcctgcggcttgtgggtcctgccgccacctctggctgggactggcttg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660396 707 - 61074082 I e rheMac3.chr16 85214 810 + 80904711 I a score=328961.000000 s hg38.chr17_GL383563v3_alt 175461 227 + 375691 cccctgcccagaatgccctgcccacccgtcttctcttggcacag----aaaactgtcttctccaggaagccctccgtctcacctgtgccctggctggctgaatgcc--ctgtgctctctgctacaactgcacc-aaccactgtctgctctgtttgcatgtctgcttcccctagcaggttgtgaggctccttgagggcagggaccaaatTGCACATGCAAATGAGGCT-GGTGTGG s panTro4.chr17 161175 227 + 82630442 cctctgcccagaatgccctgcccacccatcttctcttggcacag----aaaactgtcttctccaggaagccctctgtctcacctgtgccctggctggctgaatgcc--ctgtgctctctgctacaactgcacc-aaccactgtctgctctgtttgcatgtctgcttcccctagcaggttgtgaggctccttgagggcagggaccaagtTGCACATGCAAATGAGGCT-GGTGTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 59306 227 + 73212453 cctctgcccggaatgccctgcccacccgtcttctcttggctcag----aaaactgcctccttcaggaagccctccgtctcacctgtgccctggctggctgaacgcc--ctgtgctctctgctaccactgcacc-aaccactttctgctctgtttgcgtgtctgcttcctctagcaggtcgtgaggctccttgagggcagggaccaaatTGCACATGCAAATGAGGCT-GGTGTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120482 227 - 81552678 cctctgcccagaatgccctgcccacccgtcttctcttggctcag----aaaactgcctcctccaggaagccctctgtctcacctgtgccctggctggctgaacgcc--ctgtgctctctactacaactgcacc-aaccactttctgctctgtttgcgtgtctgcttcccctagcaggttgtgaggctccttgagggcagggaccaaatTGCACATGCAAATGAGGCT-GGTGTGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 86215 220 + 80997621 cctc---------tgccctgcccacctgtcttctctcggaccagttagaaaactgcctcctccaggaagccc---atctcacctgtgccctggctggctgaacaccctctgtgctctctgctacaacggcaccaaaacactttctg--ctgtttgcatgtctgcttcccctagcaggtcatgaggctcctcgagggcagggaccaaatTGCACATGTAAATGAGGCT-GGTGTGG i macFas5.chr16 C 0 I 1 s chlSab2.chr16 88230 212 + 75148670 CCTC---------TGCTCTGCCCACCTGTCTTCTCTCGCACCAGTTACAAAACTGCCTCCTCCAGGAAGCCC---ATCTCACCTGTGCCCTGGCTGGCTGAACGCC--CTGTGCTCTCTGCTACAACGGCACCAAACCACTTTCTG--ctgtttgcatgtctgcttcccctagcaagtcatgaggctcctcgagggcgggcacGAAATTGC------AAATGAGGCT-GGTGTGG i chlSab2.chr16 C 0 I 924 s calJac3.chrUn_GL286409 900247 217 - 1291538 cctctgcccagaacgccctgcccacctgtcttctcttggctcagttagaaaactacctcctccaggaagccctcagtctcccctgtgccttggctggctggattcc--ctatgctctctgctacagctgcacc-a---attttctgccctctttg---------tttcccccacaggtcgagagg---tttgagggcagggaccaaatcATACAGGCAAACGAGGCTGGGTGTGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660396 707 - 61074082 I e papAnu2.chr16 93110 1332 + 74645514 M e rheMac3.chr16 85214 810 + 80904711 I a score=28062.000000 s hg38.chr17_GL383563v3_alt 175688 15 + 375691 CTCTCCTCTCTGTGG s panTro4.chr17 161402 15 + 82630442 CTCTCCTCTCTGTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 59533 15 + 73212453 CTCTCCTCTCTGTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120709 15 - 81552678 CTCTCCTCTCCGTAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 86436 15 + 80997621 CTTTCCTCTCTGTGG i macFas5.chr16 I 1 I 398 s chlSab2.chr16 89366 15 + 75148670 CTCTCCTCTCTGTGG i chlSab2.chr16 I 924 C 0 s calJac3.chrUn_GL286409 900464 15 - 1291538 CTCTCCTCTCTGTGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660396 707 - 61074082 I e papAnu2.chr16 93110 1332 + 74645514 M e rheMac3.chr16 85214 810 + 80904711 I a score=24582.000000 s hg38.chr17_GL383563v3_alt 175703 21 + 375691 ACCTGACCTGTACACTGgagc s panTro4.chr17 161417 21 + 82630442 ACCTGACCTGTACACTGGAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 59548 21 + 73212453 ACCTGACCTGTGCACTGAAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120724 21 - 81552678 ACCCGACCTGTGCACTGGAGC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 89381 21 + 75148670 CCCTGACCTGTGCACTGGGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 900479 21 - 1291538 GCCTGACCTGTGCCCTGGGGC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660396 707 - 61074082 I e papAnu2.chr16 93110 1332 + 74645514 M e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86451 398 + 80997621 I a score=910.000000 s hg38.chr17_GL383563v3_alt 175724 1 + 375691 a s panTro4.chr17 161438 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 59569 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120745 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 89402 1 + 75148670 A i chlSab2.chr16 C 0 I 1 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660396 707 - 61074082 I e calJac3.chrUn_GL286409 900500 0 - 1291538 C e papAnu2.chr16 93110 1332 + 74645514 M e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86451 398 + 80997621 I a score=227257.000000 s hg38.chr17_GL383563v3_alt 175725 461 + 375691 agagtgatgagcatggactattctcaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactggattaagaaaatgtggcacatatacaccatggagtactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaagacaaaaaaccaaacagtgcatgttctcactcataggtgggaattgaacaatgagaacacttggacacagggtggggaacatcacacacc-gggcctgtcatggggttgggggaggggggagggatagcgttaggagatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacacggcacatgtatacagatgtaacaaacctgcacgttatgcacatgtaccctagaacttaaaatataatggaaaaaaaaaaa-- s panTro4.chr17 161439 463 + 82630442 AGAGTGATGAGCATGGactattctcaatagcaaagacttggaaccaaccgaaatgtccatcaatgacagactggattaagaaaacgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaagacaaaaaaccaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacttggacacagggtggggaacatcacacgccggggcctgtcatggggttgggggaggggggagggatagcattaggagatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacacggcacatgtatacagatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataatggaaaaaaaaaaa-G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 59570 446 + 73212453 AGAGTGATGAGCATGGactattcacaatagcaaagacttggaaccaa-----------------gatagactggattaagaaaatgtggcacatacacaccatggagtactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaagac-aaaaaccaaacaccacatgttctcactcataggtgggaattgaacaatgagaacacttggacacaggaaggggaacatcacacactggggcctgtcatggggtcgggggaggggggagggatagcattaggagatatacctaatgtaaatgacaagttaatgggtgcagcacaccaacatggcacgtgtatacatatgtaacaaacctgcacattgtgcacatgtaccctagaacttaaagtataatgaaaaaaaaaaaaAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 120746 458 - 81552678 AGAGTGATGAGCATGGTctattcacaatagcaaagacttggaaccaacctaaatgtccatcaatgataggctggattaagaaaatgtggcacatacacgccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcacaaggacagaaaaccaaacaccacatgtt----ctcataggtgggaaatgaacaatgagaactcatggacacaggaaggggaacatcacactccagggcctgttgtggggtggggggaagggggagggacagcattaggagatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatggcacatgcatacagatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagcataatgaaaaaaaaaaaa-- i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660396 707 - 61074082 I e calJac3.chrUn_GL286409 900500 0 - 1291538 C e chlSab2.chr16 89403 1 + 75148670 I e papAnu2.chr16 93110 1332 + 74645514 M e rheMac3.chr16 85214 810 + 80904711 I e macFas5.chr16 86451 398 + 80997621 I a score=1365.000000 s hg38.chr17_GL383563v3_alt 176186 1 + 375691 a s panTro4.chr17 161902 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60016 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 86849 1 + 80997621 A i macFas5.chr16 I 398 C 0 s papAnu2.chr16 94442 1 + 74645514 a i papAnu2.chr16 M 1332 C 0 s calJac3.chrUn_GL286409 900500 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75835233 2318 + 122082543 I e canFam3.chr9 15660396 707 - 61074082 I e chlSab2.chr16 89403 1 + 75148670 I e rheMac3.chr16 85214 810 + 80904711 I e nomLeu3.chr19 121204 0 - 81552678 C a score=474.000000 s hg38.chr17_GL383563v3_alt 176187 1 + 375691 a s panTro4.chr17 161903 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60017 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 86850 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 94443 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 900501 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15661103 1 - 61074082 a i canFam3.chr9 I 707 C 0 e mm10.chr11 75835233 2318 + 122082543 I e chlSab2.chr16 89403 1 + 75148670 I e rheMac3.chr16 85214 810 + 80904711 I e nomLeu3.chr19 121204 0 - 81552678 C a score=189238.000000 s hg38.chr17_GL383563v3_alt 176188 52 + 375691 gagtgatgagcatgggatcaggCCTGGCCTCTCCTTCCTCCATCTGCTCAGA s panTro4.chr17 161904 52 + 82630442 GAGTGATGAGCATGGGATCGGGCCTGGCCTCTCCTTCCTCCATCTGCTCAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60018 52 + 73212453 GAGTGATGAGCATGGGATCGGGCCTGGCCTCTCCTTCCTCCATCTGCTCAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 121204 52 - 81552678 GAGTGGTGAGCATGGGATCGGGCCTGGCCTCCCCTTCCTCCACCTGCTCAGA i nomLeu3.chr19 C 0 M 1475 s rheMac3.chr16 86024 52 + 80904711 GAGTGATGAGCATGGGGTTGGGCCTGGCCTTTCCTTCCTCCATGTGCTCGAA i rheMac3.chr16 I 810 C 0 s macFas5.chr16 86851 52 + 80997621 GAGTGATGAGCATGGGGTTGGGCCTGGCCTTTCCTTCCTCCATCTGCTCGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 94444 52 + 74645514 GAGTGATGAGCATGGGGTTGGGCCTGGCCTTTCCTTCCTCCATCTGCTCAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 89404 52 + 75148670 GAGTGATGAGCATGGGGTTGGGCCTGGCCTTTCCTTCCTCCATCTGCTCAAA i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 900502 52 - 1291538 GAGTGGTGAGCATGGGATGGGGCCTGGCCTTTCCTTCCTCCACCTGCTCAAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75837551 45 + 122082543 GAGTGATGA--ATGTGTCTGTCCCTGGCTTGTCCTCC-----TCTGCTTCAG i mm10.chr11 I 2318 C 0 s canFam3.chr9 15661104 52 - 61074082 gagtgatgctaacctgatttttcccagctttttcttcctctatctgctcaag i canFam3.chr9 C 0 C 0 a score=266896.000000 s hg38.chr17_GL383563v3_alt 176240 122 + 375691 ---------GGCTC-TGCCTTTTTCT-------GTCCTGCTCC---------CCA--GGAAGAGTTCTACTCCGGCTCCTTGGACTTTTATGATGCCGCAGCAagaggagatggggatggggcatggctgtggtccgtgtgccctcttcg s panTro4.chr17 161956 122 + 82630442 ---------GGCTC-TGCCTTTTTCT-------GTCCTGCTCT---------CCA--GGAAGAGTTCTACTCCGGCTCCTTGGACTTTTATGATGCCGCAGCAagaggagatggggatggggcatggctgtggtccgtgtgccctcttcg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60070 122 + 73212453 ---------GGCTC-TGCCTTTTTCT-------GTCCTGCTCT---------CCA--GGAAGAGTTCTGCTCTAGCTCCTCGGACTTTTGTGATGCAGCAGCAAGAGGAGATAGGGATGGGGCATGGTTGTGGTCCGTGTGCCCTCTTCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 86076 124 + 80904711 ---------GGCTC-TGCCTCTTTCT-------GTCCTGCTGT---------CCGGGGGAAGAGTTGTGCTTTGGCTCCTTGGACTTTTGTGACGCAGCAGCAGGAGGAGATGGGGACGGGgcatggctgtggtctgtgtgccctctcga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 86903 124 + 80997621 ---------GGCTC-TGCCTCTTTCT-------GTCCTGCTGT---------CCGGTGGAAGAGTTGTGCTTTGGCTCCTTGGACTTTTGTGACGCAGCAGCAGGAGGAGATGGGGACGGGgcatggctgtggtctgtgtgccctctcga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 94496 124 + 74645514 ---------GGCTC-TGCCTCTTTCT-------GTCCTGCTGT---------CCGGGGGAAGAGTTGTGCTTTGGCTCCTTGGACTTTTGTGACGCAGCAGCAGGAGGAGATGGGCACGGGGCATGGCTGTGGTCTGCGTGCCCTCTTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 89456 124 + 75148670 ---------GGCTC-TGCCTCTTTCT-------GTCCTGCTCT---------CTGGGGGAAGAGCTGTGCTTTGGCTCCTTGGACTTTTGTGACGCAGCAGCAAGAGGAGATGAGGACGGGgcatggctgtggtctgtgtgccctcttga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 900554 105 - 1291538 ---------GGCTC-TGCCTTTTTCT-------GCCCTGCTCT---------CTA--GGAAGAGTTCTGCTTTGATTCCTCAGACTTCTGTGACACAGCATCAAAAGGAGA-GGGGATGGAGCA---------------TGCCCCTTCC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75837596 121 + 122082543 ----------CCTCTTACCCTTTTCTGTTCTTGGTCCTCCTCTCATATGCCACTG--GCAAGACTCCCGATTTGGC--------CGTTGATGACACAGAACCAAGAAGAAG-AGGGATGGGGCT------GGGTTCCTGTGCCCTTCC-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15661156 126 - 61074082 gatcttgccttttc-tgctctttccc-------tccttgcctt---------catgagaaagagttttgctttggctttttgggctttcgtgctgtagaatcaagagggaATTCAGAGGGg------ctgtgatccacatgccccttca- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 121256 1475 - 81552678 M a score=552830.000000 s hg38.chr17_GL383563v3_alt 176362 157 + 375691 tagtacttgagaaatgcaaggaa-aacctgcctta---ttttgcagttgtttttcgggtcctggactgagctgctttgatcatgaatccaccaagactggacctcatgggt----gtcagttttataagcattTCTGTAG------TTTTGACTCA--------CTGATGAGATGCCAA s panTro4.chr17 162078 157 + 82630442 tagtacttgagaaatgcaaggaa-aacctgcctta---ttttgcagttgttttttgggtcctggactgagctgctttgatcatgaatccaccaagactggacctcatgggt----gtcagttttataagcattTCTGTAG------TTTTGACTCA--------CTGATGAGATGCCAA i panTro4.chr17 C 0 M 459 s ponAbe2.chr17 60192 157 + 73212453 TAGTATTTGAGAAATGCAAGGAA-AACCTGCCTTA---TTTTGCAGTTGTTTTTTGGGTCCTGGACTGAGCTGCTTTGATCATGAATCCACCAAGACTGGACCTCACGGGC----ATCAGTTTTATAAGCATTTATGTAG------TTTTGACTCA--------CTGATTAGATGCCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 122740 157 - 81552678 Tggtatttgagaaatacgaggaa-aaccttcctta---ttttgcaattgtttttcgggtcctggactgagctgctttgatcatgaatccaccaagactggacctcatgggc----gtcagttttataagcattTATGTAG------TTTTGACTCA--------CTGATTAGATGCCAA i nomLeu3.chr19 M 1475 C 0 s rheMac3.chr16 86200 157 + 80904711 tagtatttgagaaatgcgaggaa-aacctgcctta---ttttgcgattgtcttttgggtcctggactgagctgctttgatcacgaatccacctagactaggcctcatgggc----gtccgttttacaagcatGTGTGTAG------TTTTGACTCA--------CTGATTAGATGCCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87027 157 + 80997621 tagtatttgagaaatgcgaggaa-aacctgcctta---ttttgcgattgtcttttgggtcctggactgagctgctttgatcacgaatccacctagactaggcctcatgggc----gtccgttttacaagcatGTGTGTAG------TTTTGACTCA--------CTGATTAGATGCCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 94620 157 + 74645514 TAGTATTTGAGAAATGCGAGGAA-AACCTGCCtta---ttttgtgattgttttttggGTCCTGGACTGAGCTGCTTTGATCACGAATCCACCAAGACTAGACCTCGTGGGC----GTCCGTTTTACAAGCATGTGTGTAG------TTTTGACTCA--------CTGATTAGATGCCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 89580 157 + 75148670 tagtatttgagaaatgcgaggaa-aacctgcctta---ttttgtgattgttttttgggtcctggactgagctgctttgatcacgaattcaccaagaccagacctcgtgggc----gtccgttttacaagCACGTACGTAG------TTTTGACTCA--------CTGATTAGATGCCAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 900659 158 - 1291538 TAGTATGTAAGAAATGCCAGCAA-AACCTGCCTCA---TTTTGCAGTCGTTTTTCAGGTCCTGGACTGAACTACTTTGATCATGAATCTACCAAGACTGGACCTCATGGGC----GTCAGTTTCATAAGCATTTATGTAG-----TTTTTGACTCA--------CTGATTAGATGCCAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75837717 169 + 122082543 CAGTTCATGAGAATTATAGGAAAGAACCTGACTTGCTTTTTTGTAGTTCCTTTTCCAGATCTAGACTGAA----------CGTGAATCCTCAGAGATCAGACCCTATGGGCTACAAACACTGCTACAAACACTTACGTCGTGCTTTTTTTGACTCATTGCTGGGCTGACTAAACACTAA i mm10.chr11 C 0 C 0 s canFam3.chr9 15661282 159 - 61074082 tagtatctgaaaaatgca---aa-ggcctgattta---ttttgcaattgctttgcgggtcccagattgggtttctttgatcacgactccccc--gactggaccttgc-agc----attggttttataggcattTACATAT------TTTTGACTCACTCGGTGACTGACTAAGCACCAA i canFam3.chr9 C 0 C 0 a score=257262.000000 s hg38.chr17_GL383563v3_alt 176519 159 + 375691 CCTCATGGGTCCCATGAAAAAGG-GATAGGAGGAGGTGGGAAGGAGCCAGGGATTCCTGCT-GGGCTCCTGGAGCAAGTTGTTC-CCATG-TTGCCC-----TTGGGGCAGCTACAGTGAAATTAG----AGGCCTG-TGGCTCACACTTCCCGGGAGCAGGGAGGTGTCCAG s ponAbe2.chr17 60349 156 + 73212453 CCTCATGGGCCCTGTGAAAAAGG-GA---GAGGAGGTGGGAAGGAGCCAGGGATTCCTGCT-AGGCTCCTGGAGCAAGTTGTTC-CCATG-TTGCCC-----TTGGGGCAGCTACAGTGAAATTAG----AGGCCTG-TGGCTCATACTTCCCAGGAGCAGGGAGGTGTCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 122897 158 - 81552678 CCTCATAGGTCCCATGAAAAAGG-GATAGGAGGAAGCGGGAAGGAGCCAGGGATTCCTGCT-GGGCTCCTGGAGCAAGTCATTC-CCATG-TTGCCC-----TTGGGGCAGCTACAGTGAACTTAG----AGGCCTA-TGGCTCCTACTTCCCGGGAGCA-GGAGGTGTCCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 86357 159 + 80904711 CCTCATGGGTCCCATGAAACAGG-GATAGGAGGAGGTGGGAAGGAGCCAGGGATTCCTGCT-GGGCTCCTGGAGCAAGTTGTTCTCCATG-TTGCCC-----TTGGGGCAGCTACGGTGAAGTTAG----AGGCCTG-TGGCTCATGC-CCCCGGGAGCAGGGAGGTGTCCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87184 159 + 80997621 CCTCATGGGTCCCATGAAACAGG-GATAGGAGGAGGTGGGAAGGAGCCAGGGATTCCTGCT-GGGCTCCTGGAGCAAGTTGTTCTCCATG-TTGCCC-----TTGGGGCAGCTACGGTGAAGTTAG----AGGCCTG-TGGCTCATGC-CCCCGGGAGCAGGGAGGTGTCCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 94777 159 + 74645514 CCTCATGGGTCCCATGAAACAGG-GATaggaggaggtgggaaggagCCAGGGATTCCTGCT-GGGCTCCTGGAGCACGTCGTTCTCCATG-TTGCCC-----TTGGGGCAGCTACGGTGAAGTTAG----AGGCCCG-TGGCTCATGC-CCCCGGGAGCAGGGAGGTGTCCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 89737 101 + 75148670 CCTCATGGGTCCCATGAAACAGG-GATAGGAGGAGGTGGGAAGGAGCCAG-----------------------------------------------------------------GGTGAAATTAG----AGGCCTG-TGGCTCGTAC-TCCCAGGAGCAGGGAGGTATCCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 900817 135 - 1291538 CCTCATGGGTCCCATGAAAAAGG-GGTAGGAGGAGGT-GGCAGAAGGCAGGGATTCCTGCT-GGACTCCTGGAGGAGGCCATTCCCCATG-TCACCC-----CTGAGGCAGCCACAGTG------G----AGGCCA---GGCCACTTC----------------AGTGTACAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75837886 151 + 122082543 CCCCATGGGTCCTCAGACACAGGAGGTGGGGGTGGGTGGGCAGGAAGTGGGGCTGCTTGTTAAGACACCTGGAGCAAGTAGCTTTCCATGCCCGCCCCCTCACTGGGGCAA-TACAGGAATACAGG----ATGGCAGCTAGCTAATGC-------TAATAGGG---------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15661441 126 - 61074082 CCCTGTGGGTCCCCAGATAAAGG-GA--GTGGGAGGTAGGCTAGAGGTAGCAAGTGGTGCC----CCCACCAAGGGAGAC-----CCTTG------------AGGGGGCAGCTGTAAAGGAATCAGCAGAGGGTCTGGTAGCCTGTTA-------------GG---------- i canFam3.chr9 C 0 C 0 e panTro4.chr17 162235 459 + 82630442 M a score=470818.000000 s hg38.chr17_GL383563v3_alt 176678 153 + 375691 CAGGAGGACAGTCCTGCGGAGGGTGGGGTGGCTCGTCTGCACACCGGTTTCCGCCTCTCTCTGGCAGAGATGCTTATGGGAGGTCTAGTCATGCTTCCTGACTTGGAATGTCCCATCTCC----------CCCACAGCT----AATATGGAAAATCTACACAGTCTG s panTro4.chr17 162706 153 + 82630442 CAGGAGGACAGTCCTGCGGAGGGTGGGGTGGCTCGCCTGCACACCGGTTTCCGCCTCTCTCTGGCAGAGATGCTTATGGGAGGTCTAGTCATGCTTCCTGACTTGGAACGTCCCATCTCC----------CCCACAGCT----AATATGGAAAATCTACACAGTCTG i panTro4.chr17 M 459 C 0 s ponAbe2.chr17 60505 153 + 73212453 CAGGAGGACAGTCCTGCGGAGGGCGAGGTGGCTCGCCTGCACACCGGTTTCCGCCTCTCTCTGGCAGAGATGCTTACGGGAGGTCTAGTCGTGCTTCCTGACTTGGAATGTCCCATCTCC----------CCCACGGCT----AATATGGAAAATCTACACAGTCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123055 153 - 81552678 CAGGAGGACAGTCCTGCGGCGGGCGGGGTGGCTTGCCTCCACACCGGTTTCCGCCTCTCTCTGGCAGAGATGCTTATGGGAGATCTAGTCATGCTTCCTGACTTGGAATGTCCCATCTCC----------CCCACGGCT----AATATGCAAAATCTACACAGTCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 86516 153 + 80904711 CAGGAGGAGAGCCCTGCGGAGGGCAGGGCGGCTCGCCTCCACGCTGCTGTCCGCCTCTCTCTGGCAGAGACGCTTATGGGAGGTCTAGTCATGCTTCCTGACTTAGAATGTCCCATCTCC----------CCCACGGCT----CATATGCAAAATCTACACAGTCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87343 153 + 80997621 CAGGAGGAGAGCCCTGCGGAGGGCAGGGCGGCTCGCCTCCACGCTGCTGTCCGCCTCTCTCTGGCAGAGACGCTTATGGGAGGTCTAGTCATGCTTCCTGACTTAGAATGTCCCATCTCC----------CCCATGGCT----CATATGCAAAATCTACACAGTCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 94936 153 + 74645514 CAGGAGGACAGTCCTGCGGAGGGCAGGGCGGCTCGCCTCCACGCTGCTGTCCGCCTCTCTCTGGCAGAGATGCTTACGGGAGGTCTAGTCATGCTTCCTGACTTGGAATGTCCCATCTCC----------CCCACGGCT----CATATGCAAAATCTACACAgtgca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 89838 152 + 75148670 CAGGAGGACAGCCCTGCGGAGGAC-GGGCGGCTCGCCTCCACGCTGCTGTCCGCCTCTCTCTGGCAGAGACGCTTATGGGAGGTCTACTCATGCTTCCTGACTTGGAATGTCCCATCTCC----------CCCACGGCT----CATACGCAAAATCTACACAGTCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 900952 147 - 1291538 CAGGAGAGT--CCCTGCAGGG----GGGTGGCTCACCTCCAGGTCGGTCTCTGCCTCTCTCTGGGAGAGATGCTTATGGGAGATCCAGTCATGCTTCCTGACTTGAACTGGCCCAGCTCG----------CCTATGGCT----GATATGCAAAATCTACACAGTCCG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75838037 149 + 122082543 --GTAGGACAGTCCCTGTGAGGAGTTGGTGACTAACCTCCACCTTGGTCTCTCCATCTCTTGGGCAGAGGCGTTCACGAT-GATCTATCATTGCTTCCTGACCTGGAATATTCCATCTTC----------CTTGTGGCT----GATCTGGGGACT-TAGGCAATTAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15661567 132 - 61074082 CAGACAGAAGTCCCTGAGGAGAGCCAG--GACTCCTGTCCACACTGGCTTCCCCTTGTCTCTGGCAG---------------------CCGTTCTTCCTGATCTGGAATGCAGGATCATCCTGGGGCCAGCCCACAGCTGGGGCAGGGGGAGGAG------------ i canFam3.chr9 C 0 C 0 a score=230892.000000 s hg38.chr17_GL383563v3_alt 176831 104 + 375691 GGGCTGGCGGTGGGCA---CGGGGCTCCGTGGTGTC-ACACAGTACCAGGCTCCTTTGGTGCAAAGGGGCAGATGTCAAAGGAC----------------TCAGAAGGAGACGATGGGATGGGA s panTro4.chr17 162859 104 + 82630442 GGGCTGGCGGTGGGCA---CGGGGCTCCGTGGTGTC-ACACAGTACCAGGCTCCTTTGGTGCAAAGGGGCAGATGTCAAAGGAC----------------TCGGAAGGAGACGATGGGATGGGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 123208 103 - 81552678 GGGCTGGGGGGGGGCA---TGGGGCTCCGTGGTGTC-ACACA-CGCCAGCCTCCTTTGGTGCGAAGGGGCAGATGTCAAAGGAC----------------TCGGAAGGAGACGACGGGATAGGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 86669 104 + 80904711 GGGCTGGGGGTGGGCA---CGGGGCTCTGTGGTGCC-ATGCAGTGCCGGGCTCCTTTGGTGCAAAGGGACAGATGCCAAAGGAC----------------TTGGAAGGAGACGACGGGCTGGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87496 104 + 80997621 GGGCTGGGGGTGGGCA---CGGGGCTCTGTGGTGCC-ATGCAGTGCCAGGCTCCTTTGGTGCAAAGGGACAGATGCCAAAGGAC----------------TTGGAAGGAGACGACGGGCTGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95089 104 + 74645514 gggctgggggtgggca---tGGGGCTCTGTGGTGCC-ACGCAGTGCCGGGCTCCTCTGGTGCAAAGGGACAGATGCCAAAGGAC----------------TTGGAAGGAGACGACGGGATGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 89990 102 + 75148670 GGGCTGGGGGTGGGCA---CGGGGCTCTGTGGTGCC---GCAGGGCCGGGCTCCTTCAGTGCAAAGGGACAGAAGCCAAAGGAC----------------TTGGAAGGAGATGACGGGATGGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901099 98 - 1291538 -GGGTTGGAGTAGGTG---TGGGGCTCCATGCTGCT-C-----TACCTGGTTCCTTTGGTGAAAAGGGGCAGATGCCAAAGGAC----------------TCGGAAGGAGGCGACAGGATGGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75838186 97 + 122082543 -GAACTAGACTTGGCA---CAGGGCTCTAAGATGCT-CAGTGACACCTGCATCCGTTAGAGCCAGTGAACAAATGCCCAGGGGC----------------------AGGGACAGTGGGGTCCGA i mm10.chr11 C 0 C 0 s canFam3.chr9 15661699 117 - 61074082 -------GGGTGGGCAATGTGCAGCACCCGAATGTTGAAACAATGCCTGGGTCCTTTGGTGCTCTTGTGCCGGTGACAGAGAGCACAAAATACTTGGAGCTCCAAAGGAGACAATGGGGAAGGG i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 60658 0 + 73212453 C a score=117852.000000 s hg38.chr17_GL383563v3_alt 176935 90 + 375691 TGTCCCAGGACTGGGGTTAGGGAGGTGAGCTCACCCTCCATCTCCCCACTCTTCCTTGTTCTGTCATCTATCACACATGGTCACAGAGTT s panTro4.chr17 162963 90 + 82630442 TGTCCCAGGACTGGGGTTAGGGAGGTGAGCTCACCCTCCATCTCCCCACTCTTCCCTGTTCTGTCATCTATCACACATGGTCACAGAGTT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 123311 25 - 81552678 T-----------------------------------------------------------------TCTATCACACATGGTCACAGAGGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 86773 88 + 80904711 TGTCCCAGGACTGGGGTTAGGGAGACAGGCTCACCCTCCGTCTCCC--CTCTTCCCTGTTCTGTCATCTATCACACAAGGTTATGGAGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87600 88 + 80997621 TGTCCCAGGACTGGGGTTAGGGAGACAGGCTCACCCTCCGTCTCCC--CTCTTCCCTGTTCTGTCATCTATCACACAAGGTTATGGAGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95193 88 + 74645514 TGTCCCAGGACTGGGGTTAGGGAGACAGTCTCACCCTCCGTCTCCC--CTCTTCCCTGTTCTGTCATCTATCACACGAGGTTATGGAGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90092 80 + 75148670 CGTCCCAGGACTGGGGTTAGG--GACAGGCTCACCCTCCGTCTCCC--CTCCTCCCTGTTCTGTCACCTATCACACCAGGTTA------T i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901197 85 - 1291538 TGTCCCAGGACT-GGGTTAGGGAGGTGGGCTCACCCTCTCCATCAT--CCCTGCCCTGT--TGTCATCTGTCACATGTGGTCACAGAGTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75838283 67 + 122082543 TGTCCCAGGAGT-TGGTTA------------------CAGTGTAAC--CCCTTGC--ATTCTGTCATCTATTGTACATGTTCTAAGAGGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C e ponAbe2.chr17 60658 0 + 73212453 C a score=102056.000000 s hg38.chr17_GL383563v3_alt 177025 32 + 375691 GGGCTGGGAGCAGGCGAAAACGGCAAGACAAC s panTro4.chr17 163053 32 + 82630442 GGGCTGGGAGCAGGCGAAAACGGCAAGACAAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60658 31 + 73212453 GGGCTGGGGGCAGGCGAAAACCG-AGGACAAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123336 32 - 81552678 GGGCTGGGGGCAGGCGAAAACCGCAAGACAAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 86861 32 + 80904711 GGGCTGGGAGCAGGCAAAAACCGCAAGACAAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87688 32 + 80997621 GGGCTGGGAGCAGGCAAAAACCGCAAGACAAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95281 32 + 74645514 GGGCTGGGAGCAGGCAAAAACCGCAAGACAAC i papAnu2.chr16 C 0 I 2 s chlSab2.chr16 90172 32 + 75148670 GGGCTGGGAGCAGGCAAACACCGCAAGACAAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901282 32 - 1291538 GGGCTGGAAGCAGGCGAAAACCGCAAGAAAAC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75838350 30 + 122082543 GGCCTAGGAGCAGGCTTAAATTGCTAGGCA-- i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C a score=223980.000000 s hg38.chr17_GL383563v3_alt 177057 104 + 375691 CGTGAACCATGCCGTGCCATGTCGTGAGGACGGCGTTTGTTATGAGTCGTGCATTTTATCC-AAAACAGCAACCCTGGAGGTGGAGTTAGGGTCAGGGTGCCACC s panTro4.chr17 163085 104 + 82630442 CGTGAACCATGCCGTGCCATGTCGTGAGGACGGCGTTTGTTATGAGTTGTGCATTTTATCC-AAAACAGCAACCCTGGAGGTGGGGTTAGGGTCAGGGTGCCACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60689 104 + 73212453 CGTGAACCGTGCCGTGCCATGGCGTGAGGATGGCATTTGTTATGAGTTGTACATTTTATCC-AAAGCAGCAACCCTGGAGGTGGAGTTAGGGTCAGGGTGCCACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123368 104 - 81552678 CGTGAACCGTGCCGCGCCATGTCGTGAGGACGGCATTTGTTATGAGTTGTGCATTTTATCC-AAAACAGCAACCCTGGAGGTGGGGTTAGGGTCAGGGTGCCACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 86893 105 + 80904711 AATGAACCGTGCCGTGCCATGTCGTGAGGACGGCGTTTGTTATGAGTTGTGCATTTTATCCAAAAACAGCAACCCTGGAGGTGGAGTCAGGGTCAGGGTGCCCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87720 105 + 80997621 AATGAACCGTGCCGTGCCATGTCGTGAGGACGGCGTTTGTTATGAGTTGTGCATTTTATCCAAAAACAGCAACCCTGGAGGTGGAGTCAGGGTCAGGGTGCCCCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 90204 105 + 75148670 AATGAACCGTGCCGTGCCATGTCGTGAGGATGGCGTTTGTTATGAGTTGTGCATTTTATCCAAAAACAGCAACCCTGGAGGTGGCGTTAGGGTCAGGGTGCCACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901314 103 - 1291538 CGTGAACAGTGCCGCGCCTCGTCATGAGAACGGCGTTTGTTGTGAGCTGTGCATTTTACCC--AAACAGCAACCCTGGAGGTGCGGTTAGGGTCAGGGTGCCTCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75838380 42 + 122082543 --------------------------------------------GGGTCTACA---------GAGACGGCACAGCC---------GTGAGGGTC-GGGTGCCATA i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C e papAnu2.chr16 95313 2 + 74645514 I a score=205707.000000 s hg38.chr17_GL383563v3_alt 177161 78 + 375691 TGGCCTAGTCCCCATTTGGTGCCCGTG-TGCACAAGGATT------CACA--------AAAAACAGGTAG-AAATCCTCCCTGAGTTACAGTCA s panTro4.chr17 163189 78 + 82630442 TGGCCTAGTCCCCATTTGGTGCCCGTG-TGCACAAGGATT------CACA--------AAAAACAGGTAG-AAATCCTCCCTGAGTTACAGTCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60793 78 + 73212453 TGGCCTAGTCCCCATTTGGTGCCCGTG-TGCACAAGGATT------CACA--------AAAAATAGGTAG-AAATCCTCCCTGAGTTACAGTCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123472 79 - 81552678 TGGCCTAGTCCCCATTTGGTGCCCATG-TGCACAAGGATT------AACA--------AAAAAAAGGTAGAAAATCCTCCCTGAGTTACAGTCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 86998 77 + 80904711 TGGCCTAGTCCCCACGTGGTGCCCGTG-TGCACCACGATT------AACA--------AAAAA-AGGCAG-CAACCCTCCCCGAGTTACAGTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87825 77 + 80997621 TGGCCTAGTCCCCACGTGGTGCCCGTG-TGCACCACGATT------AACA--------AAAAA-AGGCAG-CAACCCTCCCCGAGTTACAGTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95315 77 + 74645514 TGGCCTAGTCCCCACGTGGTGCCCGTG-TGCACCACGATT------AACa--------aaaaa-aGGTAG-CGACCCTCCCCGAGTTACAGTCA i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 90309 77 + 75148670 TGGCCCAGTCCCCACGGGGTACCCGTG-TGCACAACGATT------AACA--------AAAAA-AGGTAG-AAACCCTCCCCGAGTTACAGTCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901417 82 - 1291538 TGACCTAGTCCCCATGT-GTGCCTGTG-TGCACAAGGGTTAACAACAACA--------AAAAA-ATGTAG-AAACCATTCCCAAGTTACAGTCA i calJac3.chrUn_GL286409 C 0 I 4 s mm10.chr11 75838422 85 + 122082543 TCACCTGGATGTCAAG-GATGGCTGTGCTGTACAAGGGTT------AAAAGAAGTCACAGAAA-TTCTGG-AAAGCTTCCTCCAGCTACTGTCA i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C a score=40038.000000 s hg38.chr17_GL383563v3_alt 177239 53 + 375691 CCTTGTTCTTCATCTCCATTTAT--AGACCCCAAAGGGCCACAGCCGTGAAGAAG s panTro4.chr17 163267 53 + 82630442 CCTTGTTCTTCATCTCCGTTTAT--AGACCCCAAAGGGCCACAGCCGTGAAGAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60871 53 + 73212453 CCTTGTTCTTCATCTCCGTTTAT--AGACCCCAAAGGGCCACAGCTGTCAAGAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123551 48 - 81552678 -CTTGTTCTTCTTCTCCATTTAT---GACCCCAAAGGGCCACAGCCATGAAG--- i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 901503 55 - 1291538 GCTTGTTCTTCGTCTCCTTTTATATAGACCCCAAAGGGCCACAACCATGTAAAAG i calJac3.chrUn_GL286409 I 4 C 0 s mm10.chr11 75838507 48 + 122082543 ---TTTGACTTGTCCCCTGTGAC--AGAGCCCAAAGGTT--CAGCCATGGAAAAG i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C e chlSab2.chr16 90386 0 + 75148670 C e papAnu2.chr16 95392 0 + 74645514 C e rheMac3.chr16 87075 0 + 80904711 C e macFas5.chr16 87902 0 + 80997621 C a score=47791.000000 s hg38.chr17_GL383563v3_alt 177292 100 + 375691 TGGGGAAGAGCCTCAGATGCCAACTGAGCTCACACAGGTGACAC--AGCAGGCGCCAGGAAGCCGATGAGACAGACTCATCTCATT-AGATGCATCCTCCCTG s panTro4.chr17 163320 100 + 82630442 TGGGGAAGAGCCTCAGATGCCAACTGAGCTCACACAGGTGACAC--AGCAGGCGCCAGGAAGCCGATGAGACAGACTCATCTCGTT-AGATGCATCCTCCCTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 123599 102 - 81552678 CGGGGAAGAGCCTCAGGTGCCAACTGAGCTCACACAGGTGACACAGAGCAGGCGCCAGGACGCCGATGAGACAGACTCGTCTCGTT-AGACACATTCTCCCTG i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 901558 102 - 1291538 GGCGGAAGAGCCTCCGATGCCAACTGAGCTCGAAAAGGTGACACAGAGTAGGTACCAGGCAGCCAGTGAAACAGGCTCACAGCTTTCAGATGCTTCTCCCCA- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75838555 91 + 122082543 -GGGGAACAGCCTCTGGTGACAAT----CTCACAATGGGATCACAAAGCAGGGACCAG-------CTGAGAAGTACTCATTTCTTTCAGACACACTGTCCCTT i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C e chlSab2.chr16 90386 0 + 75148670 C e papAnu2.chr16 95392 0 + 74645514 C e rheMac3.chr16 87075 0 + 80904711 C e macFas5.chr16 87902 0 + 80997621 C e ponAbe2.chr17 60924 0 + 73212453 C a score=3600.000000 s hg38.chr17_GL383563v3_alt 177392 1 + 375691 G s panTro4.chr17 163420 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 123701 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87075 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87902 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95392 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90386 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901660 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 T 157 s mm10.chr11 75838646 1 + 122082543 G i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C e ponAbe2.chr17 60924 0 + 73212453 C a score=28551.000000 s hg38.chr17_GL383563v3_alt 177393 10 + 375691 CTTGTTCTTC s panTro4.chr17 163421 10 + 82630442 CTTGTTCTTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 123702 10 - 81552678 CTTGCTCTTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87076 10 + 80904711 CTTGTTCTTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87903 10 + 80997621 CTTGTTCTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95393 10 + 74645514 CTTGTTCTTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90387 10 + 75148670 CTTGTTCTTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901504 10 - 1291538 CTTGTTCTTC i calJac3.chrUn_GL286409 T 157 C 0 s mm10.chr11 75838647 10 + 122082543 CCTGGCCTTT i mm10.chr11 C 0 I 380 e canFam3.chr9 15661816 0 - 61074082 C e ponAbe2.chr17 60924 0 + 73212453 C a score=88137.000000 s hg38.chr17_GL383563v3_alt 177403 43 + 375691 ATCTCCGTT--TATAGACCCCAAAGGGCCACAGCCGTGAAGAAGC s panTro4.chr17 163431 43 + 82630442 ATCTCCGTT--TATAGACCCCAAAGGGCCACAGCCGTGAAGAAGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 123712 42 - 81552678 ATCTCCGTT--TATAGACCCCAAAGGGCCACAGCCGTGAAGAAG- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87086 43 + 80904711 GCCTCCGAT--TACAGACCCCAAAGGGCCACAGCCATGAAGAAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87913 43 + 80997621 GCCTCCGAT--TACAGACCGCAAAGGGCCACAGCCATGAAGAAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95403 43 + 74645514 GTCTCCGTT--TATAGACCCCAAAGGGCCACAGCCCTGAAGAAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90397 43 + 75148670 GCCTCCGAT--TATAGACCCCAAAGGGCCACAGCCATGAAGAAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901514 45 - 1291538 GTCTCCTTTTATATAGACCCCAAAGGGCCACAACCATGTAAAAGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75838657 380 + 122082543 I e canFam3.chr9 15661816 0 - 61074082 C e ponAbe2.chr17 60924 0 + 73212453 C a score=37778.000000 s hg38.chr17_GL383563v3_alt 177446 13 + 375691 AGGGAAGAGCCTC s panTro4.chr17 163474 13 + 82630442 GGGGAAGAGCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60924 13 + 73212453 GGGGAAGAGCCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123754 12 - 81552678 -GGGAACAGCCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87129 13 + 80904711 GGGGAGGAGCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87956 13 + 80997621 GGGGAGGAGCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95446 13 + 74645514 GGGGAGGAGCCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90440 13 + 75148670 GGGGAAGAGCCTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901559 13 - 1291538 GCGGAAGAGCCTC i calJac3.chrUn_GL286409 C 0 I 89 e mm10.chr11 75838657 380 + 122082543 I e canFam3.chr9 15661816 0 - 61074082 C a score=9189.000000 s hg38.chr17_GL383563v3_alt 177459 7 + 375691 TCCGTGA s panTro4.chr17 163487 7 + 82630442 TCCGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60937 7 + 73212453 TCCGTGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123766 7 - 81552678 TCCGTGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87142 6 + 80904711 T-CGCGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87969 6 + 80997621 T-CGCGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95459 7 + 74645514 TCCGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90453 7 + 75148670 TCCGTGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75838657 380 + 122082543 I e canFam3.chr9 15661816 0 - 61074082 C e calJac3.chrUn_GL286409 901572 89 - 1291538 I a score=58939.000000 s hg38.chr17_GL383563v3_alt 177466 25 + 375691 CTGGACCCTCTCTGCTCACTGTGT-T s panTro4.chr17 163494 25 + 82630442 CTGGACCCTCTCTGCTCACTGTGT-T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60944 25 + 73212453 CTGGACCCTTTCTGCTCACTGTGT-C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123773 26 - 81552678 CTGCAGCCTCTCTGCTCACTGCGTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87148 26 + 80904711 CTGGAGCATCGCTGCTCGCTGTGTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 87975 26 + 80997621 CTGGAGCATCGCTGCTCGCTGTGTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95466 26 + 74645514 CTGGAGCATCGCTGCTCGCTGTGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90460 26 + 75148670 CTGGAGCATCTCTGCTCGCTGTGTCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901661 26 - 1291538 CTGGAGCCTCTCTGCTCATTGTGTCT i calJac3.chrUn_GL286409 I 89 C 0 e mm10.chr11 75838657 380 + 122082543 I e canFam3.chr9 15661816 0 - 61074082 C a score=329107.000000 s hg38.chr17_GL383563v3_alt 177491 98 + 375691 GGGATTTCAAGCTGGGGCTTAG-----------AGGTCTTTGTGGTACAGACCCAAATCCCATTTCTAATCCACTCTAATAAACACCACTCGAAAGAAATAAACCAAAG s panTro4.chr17 163519 98 + 82630442 GGGATTTCAAGCTGGGGCTTAG-----------AGGTCTTTGTGGTACAGACCCAAATCCCATTTCTAATCCACTCTAATAAACACCACTCGAAAGAAATAAACCAAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 60969 98 + 73212453 GGAATTTCAAGCTGGGGCTTAG-----------AGGTCTTTGTGGTACAGACCCAAATCCCATTTCTAATCCACTCTAATAAACACCACTCGAAAGAAATAAACCAAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 123799 98 - 81552678 GGGATTTCAAGCTGGGGCTTAG-----------AGGTCTTTGTGGTATAGACCCAAATCTCATTTCTAATCCACTCTAATGAACACCACTCGAAAGAAATAAACCAAAG i nomLeu3.chr19 C 0 I 1485 s rheMac3.chr16 87174 98 + 80904711 GGGATTTCAAACTGGGGCTCAG-----------AGGTCTTTGTGGTACGGACCCAAATCCCATTTCTAATCCACTCGAATAAACACCACTCAAAAGAAATAAACCAAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 88001 98 + 80997621 GGGATTTCAAACTGGGGCTTAG-----------AGGTCTTTGTGGTACGGACCCAAATCCCATTTCTAATCCACTCGAATAAACACCACTCAAAAGAAATAAACCAAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95492 98 + 74645514 GGGATTTCAAACTGGGGCTTAG-----------AGGTCTTTGTGGTACGGACCCAAATCCCATTTCTAATCCACTCGAATAAACACCactcaaaagaaataaaccaaaG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90486 98 + 75148670 GGGATTTCAAACTGGGGCTTAG-----------AGGTCTTTGTGGTACGGACCCAAATCCCATTTCTAATCCACGCTAATAAACACCACTCAAAAGAAATAAACCAAAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901687 98 - 1291538 GCGATTTCAAGCTGGGGCTTAG-----------AGGTCTTTGTGGTACAAACCCAAATCCCATTTCTAATCCACTCTAATAAACACCACTCGAAAGAAATTAATCAGAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75839037 99 + 122082543 GGGAATTTAAGCTGGGACTCGGCCACAGCCATCAGGTCTATGTGCTGAAGACTCACGTTCCATTTCCAATCTGCTCTTGTAAA------GCAAAAGAAGGCAGTG---- i mm10.chr11 I 380 C 0 e canFam3.chr9 15661816 0 - 61074082 C a score=394764.000000 s hg38.chr17_GL383563v3_alt 177589 174 + 375691 GAAGTCAGC--A-GTGCCCGCACCAGCCTTGGCATTTACTGG--------CAGGGCGGAAGGGCCACACCGAGCAAACCCTGCTGAGAAGCCCTGGGCCCAACACAAACACGGTGTCCCCAAATGTTCCTGGCTTCCTCGGGCTGCAAAGGAAGAAGCCTTTTCTTCTTCCTCCCTCCATTGAAA s panTro4.chr17 163617 171 + 82630442 GAAGTCAGC--A-GTGCCCACGCCGGCCTTGGCATTTACTGG--------CAGGGCGGAAGGGCCACGCCGAGCAAACCCTGCTGAGAAGCCCTGGGCCCAACACAAACACGGTGTCCCCAAATGTTCCTGGCTTCCTCGGGCTGCAAAGGAAGAAGCCT---CTTCTTCCTCCCTCCATTGAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 61067 174 + 73212453 GAAGTCAGC--A-GTGCCCGCACCGGCCTTGGCATTTACCGG--------CAGGGCGGAAGGGCCACACCGAGCAAACCCTGCTGAGAAGCCCTGGGCCCAACACAAACACAGTGTCCCCAGATGTTCCTGGCTTCCTCAGGCTGCAAAGGAAGAAGCCTTTTCTTCTTCCTCCCTCCATTGAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 125382 171 - 81552678 GAAGCCAGC--A-GTGCCCGCACCGGCCTTGGCATTTACTGG--------CGGGGCGGAAGGG---CACCGAGCAAACCCTGCTGAGGAGCCCCAGGCCCAGCACAAACGCGGCGTCCCCAGATGTTCCTGGCTTCCTCGGGCTGCGAAGGAAGCAGCCTTTTCTTCTTCCTCCCTCCATTGAAA i nomLeu3.chr19 I 1485 C 0 s rheMac3.chr16 87272 164 + 80904711 GAAGTCGGC--A-GTGCCCGCAGCAGCCTT-GCATGTACTGG--------CAGGATGGACGGGCCACACCGAGCAAACTCCGCTGAGAAGGCCCTGGCCCGGCACAAACACGGTGTCCCCAGATA--------TTCCTCGGGCTGCAGAGGGGG-AGCCTTTTCTTCTTCCTCCCTCCGCTGAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 88099 166 + 80997621 GAAGTCGGCAGA-GTGCCCGCGGCAGCCTT-GCATGTACTGG--------CAGGATGGACGGGCCACACCGAGCAAACTCCGCTGAGAAGGCCCTGGCCCGGCACAAACACGGTGTCCCCAGATA--------TTCCTCGGGCTGCAAAGGGGG-AGCCTTTTCTTCTTCCTCCCTCCGCTGAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95590 173 + 74645514 GAAGTCAGC--A-GTGCCCGCAGCAGCCTTGGCATGTACTGG--------CAGGATGGACGGGCCACACCGAGCAAACTCCGCTGAGAAGGCCCTGGCCCGGCACAAACACGGTGTCCCCAGATATTCCTGGCTTCCTCGGGCTGCAGAGGGGG-agcctcttcttcttcctccctccgcTGAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 90584 173 + 75148670 GAAGTCAGC--A-GTGCCCACAGCGGCCTTGGCACGTACTGG--------CAGGACAGACGGGCCACACTGAGCAAACTCCGCTGAGAAGCCCCTGGCCCAGCACAAACATGGTGTCCCCAGCTATTCCTGGGTTCCTCGGGCTGCAGAGGGGG-AGCCTTTTCTTCTTCCTCCCTCCACTGAAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901785 170 - 1291538 GAAGTCAGC--G-GTGCCCACACCAGCCTT-GGGTTCACTGC--------CAGTGCAGAAGGCCTACACTGAA-GGACCCTGCTGAGAAGTCCTTGGCCCACCACGAACACCAAAT-GCCAAACGTCCCCAGCTTCCTCAGGATGCGAAGGAAGCAGTCTTCCCTTCTACC-CCCACTCTGGAAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75839136 124 + 122082543 TTGGCTAGC--AGGTGGCCA-------CTT-ACAGTCACTGGGGCAAAGACAGAGAGGAAGCTGCATGCCATGTGGGCCTTG-------------------------AAATTATGTCACCAAGT-------------CCCAGTGGCCACGGAAGCAGCCTTTTCTCTTTCCT------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15661816 0 - 61074082 C a score=1186992.000000 s hg38.chr17_GL383563v3_alt 177763 386 + 375691 TGTCACCGTAAAACTCAAACTTCGGCTAATTTGCCATTCGATTGCTG-TTGCCACCTTTCTCCCTGCATAGCAGCTGTGATTGTCAGTCTTCCAGGTCTATTCACAAAGATTTCAGACTCATACA---TCTGGCCCTTGCTCTTCCATCCTCAACATAACACTCTGTGTGTCTGAAGGCTGATACATTTTTTTTCTCTCTAATTCTCCAAAGGCTGAGTCTGGGATGG--CTCACCGA-CGAGCCCT-GTATTCTGCCCACGCCTGGTTTTTCAGATGGAAGATGCGAGTACACCAGGGAGAAGGCTGTCCCAACAGCCTTTCGGAGGAAGAAGTATC-----ATGGAGTCACCCGGGTGCCGCCGAGAGGCAGGGGTGGGGGAGAAGCTCCCCTCCTG------ s panTro4.chr17 163788 386 + 82630442 TGTCACCGTAAAACTCAAACTTCGGCTAATTTGCCATTCGACTGCTG-TTGCCACCTTTCTCCCTGCATAGCAGCTGTGATTGTCAGTCTTCCAGGTCTATTCACAAAGATTTCAGACTCATACA---TCTGGCCCTTGCTCTTCCATCCTCAACGTAACACTCTGTGTGTCTGAAGGCTGATATGTTTTTTTTCTCTTTAATTCTCCAAAGGCTGAGTCTGGGATGG--CTCACCAA-CGAGCCCT-GTATTCTGCCCACGCCTGGTTTTTCAGATGGAAGATGCGAGTACACCAGGGAGAAGGCTGTCCCAACAGCCTTTCGGAGGAAGAACTATC-----ATGGAGTCACCCGGGTGCCGCCGAGAGGCAGGGGTGGGGGAGAAACTCCCCTCCTG------ i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 61241 387 + 73212453 TGTCACCGTAAAACCCAAACCTCAGCTAATTTGCCATTTGATTGCCA-TTGCCACCTTTCTCCCTGCACAGCAGCTGTGATTGTCAGTGTTCCAGGTCTATTAACAAAGCTTTCAGGCTCATACATCTTCTGGCCCTTGCTTTTCCATCCTCAACATAACACTCTGTGTGTCTGAAGGCTGAT--GTTTTTTTTCTCTTTAATTCCCCAAAGGCTGATTCTGGGATGG--CTCACCGA-CGAGCCCT-GTATTCTGCCCACGCCTGATTTTTTAGATGGAAGATGCGAGTACACCAGGGAGAAGGCTGTCCCAACAGCCTTTCGGAGGAAGAAGTATC-----ATGGAGTTACCCGGGTGCCACTGAGAGGCAGGGGTGGGGGAGAATCTCCCCTCCTG------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 125553 385 - 81552678 TGTCACCG-AAAACCCAAACCTCGGCTAATCTGCCATTCGACTGCTG-TTGACACCTTTCTCCCTGCATAGCAGCTGTGACTGTCAGTCTTCCAGG-CTGTTAACAAAGCTTTCAGGCTCACCCGTCTTCTGGCCCTTGCTCTTCCATCCTCAACATAACACTCTGTGTGTCTGAAGGCTCATA-TCTTTTTTTCTCTTTAATTCCCCAAAGGCTGAGTCTGGGATGG--CTCACCGA-TGGGCCCT-GTATTCTGCCCACGCCTGATTTTTCAGATGGAAGATGCGAGTACACCAGGGAGATGGCCGTCCCAACAGCCTTTCGGAGGAAGGAGTATC-----ACGGAGTCA-CCGGGCGCTGCCGAGAGGCAGGGGTGGGGGAGAAGCTCTCCCCCTG------ i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87436 382 + 80904711 CGTCACCGTAAAACCCAGACCTCAGCTAATTCGCCGTGCGATTGCCG-TTGCCACCTTTCTCCCTCCATAGCAGCTGTGACTGTCAGTCTTCCAGGCCTATTAACAAAGCTTTTAGGCTCATACATCCTCTGGCCCTTGCTCTTCCATCCTCAACACAACACTC--TGTGTCTGAA-GCTGATA-TATTTTTTCCTCTTTAATTCCCCAAGGGCTGAGTCTGGGACGG--CTCGCCCA-CGAGCCCT-GTATTCTGCCCACGTCTGATTTTTCAGATGGAAGACGGGAGTACACCAGGGAGAAGGCCGTCCCACCTGCCTTTCGGAGGAAGAAGTATC---AGATGGAGTCACCCGGCTGCCGCC--GAGGCAGGGGT-GGGGAGAAGCCCCTCCCG-------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 88265 384 + 80997621 CGTCACCGTAAAACCCAGACCTCAGCTAATTCGCCGTTCGATTGCCG-TTGCCACCTTTCTCCCTCCATAGCAGCTGTGACTGTCAGTCTTCCAGGCCTATTAACAAAGCTTTTAGGCTCATACATCCTCTGGCCCTTGCTCTTCCATCCTCAACACAACACTC--TGTGTCTGAA-GCTGATA-TATTTTTTCCTCTTTAATTCCCCAAGGGCTGAGTCTGGGACGGCTCTCGCCCA-CGAGCCCT-GTATTCTGCCCACGTCTGATTTTTCAGATGGAAGACGGGAGTACACCAGGGAGAAGGCCGTCCCACCTGCCTTTCGGAGGAAGAAGTATC---AGATGGAGTCACCCGGCTGCCGCC--GAGGCAGGGGT-GGGGAGAAGCCCCTCCCG-------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 95763 383 + 74645514 CGTCACCGTAAAACCCAGACCTCAGCTAATTTGCCATTCGATTGCCG-TTGCCACCTTTCTCCCTCCATAGCAGCTGGGACTGTCAGTCTTCCAGGCCTATTAACAAAGCTTGTAGGCTCACGCATCTTCTGGCCCTTGCTCTTCCATCCTCAACACACCACGC--TGTGTCTGAAGGCtgata-tattttttcctctttaattccCCAAAGGCTGAGTCTGGGATGG--CTCGCCGA-CGAGCCCT-GTATTCTGCCCACGTCTGATTTTTCAGATGGAAGACGGGAGTACACCAGGGAGAAGGCTGTCCCACCTGCCTTTCGGAGGAAGAAGTATC---AGATGGAGTCACCTGGCTGCCGcc--gaggcaggggt-ggggagaagcCCCTCCCG-------- i papAnu2.chr16 C 0 I 207 s chlSab2.chr16 90757 385 + 75148670 CAGCACCGTAAAACCCAGACCTCAGCTAATTTGCCATTCGATTGCCG-TTGCCACCTTTCTCCCTCCATAGCAGCTGTGACTGTCAGTCTTCCAGGCCTATTAACAAAGCTTTTAGGCTCATACATCTTCTGGCCCTTGCTCTTCCATCCTCAACACAACACTC--TGTGTCTGAAGGCTGATG-TATTTTTTCCTCTTTAATTCCCCAAAGGCTGAGTCTGGGATGG--CTCACCGA-CGAGCCCT-GTATTCTGCCCACGCCTGAGTTTTCAGATGGAGGACGGGAGTACACCAGGGAGAAGGCTGTCCCACCTGCCTTACAGAGGAAGAAGTATC---AGATGGAGTCACCCAGCTACCGCTGAGAGGCAGGGGT-GGGGAGAAGCCCCTCCCA-------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 901955 383 - 1291538 CATCACTGTAAAACCCAAACCTTGCCTAATTTGCCATTCAATGGCTG-TTGCCCCCTTTCTCCCCGCACAGCAGCTGT-ACTGTCAATCTTCTAGGTCCATTAACAAAGCCTTCAGGCTCATACATCTTTCGGCTCTTACTCTTCCATCTTCAGTGTAACACTC--TGTGTCTTAAGGCTGATC-TATTTTTTTCTCCTTAATTCCCCAAAGGCTGAGTCTGGGATGG--CTCACCGA-GGGGCCCT-GTACTCTGCCCACACCTGAATTTTCAGATGGAAAATGGGAGAACACCAGGGAGAAACCTGTCCCAATAGTCTTTCTGAGAAAGAAGTATCATCAGATGGAGTCACCCGG-TGCCACCAAGAGACAGGGGTGGGGGAGGAGCTCCC------------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75839260 306 + 122082543 -GTCTCTGTAAACCCCAAACCTGGGGTAGAGTGCC-----ACTGATG-TTG----CTTTCCCTCTGCACGGTGAC----------------CAGGGTCTA--AACAAAGCTCTTAGGCTCATAAA-CCTTTGGCCTCTG---------------------------TGAGTCGCTAGGC--ATG---------------------TCTGGAGGTAGCATCTGCCACAG--ATCAGGGAGTGAGCGCTCGTTTTCTGCCTGTGCTTTGGCTTTTAGACAGAGG-TAGGAAAAC-CCTGGGAGAC-CCTGGTCTGAAAGCCTGAAGGAGAA--GAGTATTCTTATCCAGACTCA-TAGGGCCCCACCATGAGGCAGGA---GGGGAGCCTTCACAGCTG-------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15661816 391 - 61074082 TGTCACCATAAAACCCAAACCTGGGCTAATTTGCCATTGGATTGCTGATTGCCACCTTTCTCGCTGCGCGGCAGCTGTGATTGTAAATCTTCCAGGTCTATTAACAAAGCTTTCAAGCTCATAAATCTTCTGGCCCTTGCTCTTCCATCCTCAACAGAACACTCTGTGTGTCTGAAGGCTGATT------GTTCCCTTCTAATTCCCCAAAGAC--AGTCTAGGATGG--CTTGGCGA-TGAGTGCTTGCCTTCAACCCACGCCTCATTTTTCAGATCGAAGTTGGGAAAACACCAGGGAGAAGACTGTCCCACTTGTCCTCCCAAGAAGGAGGAGTCACCAAATGGACTCACCTGGGCTCTGCCAGGAGGCAGGGAG-GAGGTTGGGCCTCCCCCA--CTCCTG i canFam3.chr9 C 0 C 0 a score=3106814.000000 s hg38.chr17_GL383563v3_alt 178149 914 + 375691 GGCCCCTCCACAGGGGCCTGAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGCTTCCCCACTGCAGCCCAGAAGGGCTGCCTGC--TTGCCTGGTGCTCATCCTCAGCAGTGGCCAG---CCCCAGCGCCAGCCGTGCCCACTTCTCTGGGGAGAGGCCAGCTTTTCTTTC--CCCCT-GCTCACTCTTGGCTGGGTTTGCAATTTGACTGTCACCATGGAAACGC-AGGGTTTTGGTACA----------------CGGA-GCGGGGGGAAGAGTCTTTCCTTCTGGAAACGCTTTCTTGACTGCCTCAAAGGACATG-GGTGGCAGCTG---TCCTGTGGAGAGGCCTGGCCTGGGATGGTCCAGGGGACAGGCGTCATGCTGGCCGTGTGGCCTCACAGCACTGCG---CTGGGATGTGGGGGCCCTGCTTCCAGGCTCTGCTCAGCCACCACC-TGTCTCCGTGGCCCCAGGCATCTCTCCAGGCTTCACTACAAAAACACAGGGGCTGACCCAGGCACCCACTCTGGGTCTGAATCCTGGGATTTAACCTTGGGTCAGC------CCA--------TGGGTGGAGACAGCCCTGGTGCCTCTCCCTGGTC---GGGGTG-GGGAGA-----TGCTCCCACTGGGCCACAGAGCATT--GCCGCCCGGCACAAGGA------CAGCCAGCAGCC--TGAGTTTGGGAGGCACTTGTGAGCTACGGCCACTCTGCTTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTATAGAGGAAGAGAGATATTTTCAGCAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCATACTAAAAACAAA---AAAAAAA-TTCTC-TAATGTAAAGGAATGATGATAA-GGCCCCTGGGAGTG--TAGACACTCCCAATTAGCCGTCTCCAGCCCACCAGGCAGGCACAGCTGCAGAGACGCAGGACTGTCTGTCCCTGCTGG s panTro4.chr17 164174 915 + 82630442 GGCCCCTCCACAGGGGCCTGAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGCTTCCCCACTGCAGCCCAGAAGGGCTGCCTGC--TTGCCTGGTGCTCATCCTCAGCAGTGGCCAG---CCCCAGCGCCAGCCGTGCCCACTTCTCTGGGGAGAGGCCAGCTTTTCTTTC--CCCCT-GCTCACTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAACGC-AGGGTTTTGGTACA----------------CGGA-GCGGGGGGAAGAGTCTTTCCTTCTGGAAACTCTTTCTTGACTGCCTCAAAGGACATG-GGTGGCAGCTG---TCCTGTGGAGAGGCCTGGCCTGGGATGGTCCAGGGGACAGGCGTCATGCTGGCCGTGTGGCCTCACAGCACTGCT---CTGGGATGTGGGGGCCCTGCTTCCAGGCTCTGCTCAGCCACCACC-TGTCTCCGTGGCCCCAGACATCTCTCCAGGCTTCACTACAAAAACACAGGGGCTGACCCAGGCACCCACTCTGGGTCTGAATCCTGGGATTTAACCTTGGGTCAGC------CCA--------CGGGTGGAGACAGCCCTGGTGCCTCTCCCTGGTC---GGGGTG-GGGAGA-----TGCTCCCGCTGGGCCACACAGCATT--GCCGCCCGGCACAAGGA------CAGCCAGCAGCC--TGAGTTTGGGAGGCACTTGTGAGCTACGGCCACTCTGCTTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTATAGAGGAAGAGAGATATTTTCAGAAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCATACTGAAAACAAA---AAAAAAAATTCTC-TAATGTAAAGGAATGATGATAA-GGCCCCCGGGAGTG--TAGACACTCCCAATTAGCCGTCTCCAGCCCACCAGGCAGGCACAGCTGCAGAGACGCAGGGCTGTCTGTCCCTGCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 61628 915 + 73212453 GGCCCCTCCACAGGGGCCTGAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGCTTCCCCACCGCAGCCCAGAAGGGCTGCCTGC--TTGCCTGGTGCTCATCCTCAGCAGTGGCCAG---CCCCAGCACCAGCCGTGCCCACTTCTCTGGGGAGAGGCCAGCTTTTCTCTC--CCCCT-GCTCACTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAACGC-AGGGTTTTGGTACA----------------CGGA-GCGGGGGGAAGAGTCTTTCCTTCTGGAAACTCTTTCTTGACTGCCTCAAAGGACATG-GGTGGCAGCTG---TCCTGTGGAGAGGCCTGGCCTGGGACGGTCCAGGGGACAGGTGTCATGCTGGCCGTGTGGCCTCACAGCACTGCG---CTAGGATGTGGGGGCCCTGCTTCCAGGCTCTGCTCAGCCACCACC-TGTCTGCATGGCCCCAGGCATCTCTCCAGGCTTCACTACAAAAACACAGGGGCTGACCCGGGCACCCACTCTGGGTCTGAATCCTGGGATTCAACCTTGGGACAGC------CCA--------TTGGTGGAGACAGCCCTGGTGCCCCTCCCTGGTC--GGGGGTG-GGGAGA-----TGCTCCTGCTGGGCCACACAGCATT--GCCGCCCGGCACAAGGA------CAGCCAGCAGCC--TGAGTTTGGGAGGCACTTGTGAGCTACGGCCACTCTGTTTGGAGGCTCCCAAA-GCCCCTAGAAATTATGGGAATTATAGAGGAAGCGAGATATTTTCAGCAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCATACTAAAAACAAA---AAAAAAA-TTCTC-TAATGTAAAGGAACGATGATAA-GGCCCCCGGGAGTG--TAGACACTCCCAATTAGCCGTCTCCAGCCCACCAGGCAGGCACAGCTGCAGAGACGCAGGGCTGTCTGTCCCTGCTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 125938 914 - 81552678 AGCCCCTCCACGGGGGCCTCAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGTTTCCCCACCGCAGCCCAGAAGGGCTGCCTGC--TTGCCTGGTGCTCATCCTCAGCAGTGGCCAG---CCCCAGCGCCAGCCGTGCCCACTTCTCTGGGGAGAGGCCAGCGTTTCTTTC--CCCCT-GCTCACTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAACTC-AGGGTTTTGGTACA----------------TGGA-GCGGGGGGAAGAGCGTTTCCTTCTGGAAAC----TCTTGACTGCCTCAAAGGACATG-GGTGGCAGCTG---TCCTGTGGAGGGGCCTGGCCTGGGATGGTCCAGGGGAGAGGCGTCATGCTGGCCGTGTGGCCTCACAGCACTGCA---CTGGGGTGCGGGGGCCCTGCTTCCAGGCTCTGCTCAGCCACCACC-TGGCTTCATGGCCCCAG--CTCTCTCCAGGCTTCTCTATAAAAACATAGGGGCTGACCCGGGCACCCACTCTGGGTCTGAATCCTGGGATTCAACCTTGGGTCAGC------CCAAAGTGCCCCTGGT-GAGACAGCCCTGGTGCCCCTCCCTGGTC--AGGGGTG-GGGAGA-----TGCTCCCGCTGGACCACACAGCATT--GCCGCCCGGCACGAGGA------CAGCCAGCAGCC--TGAGTTTGGGAGGCACTTGTGAGCTACGGCCACTCTGCTTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTATAGAGGAAGAGAGATATTTTCAGCAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCATACTAAAAACAAA---AAACA---TTCTC-TAATGTAAAGGAATGATGATAA-GGCCCCCGGGAGTG--CAGACACTCCCAGTTAGCCGTCTCCAGCCCACGAGGCAGGCGCAGCTGCAGAGACGCAGGGCTGTCCGTCCCTGCTGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 87818 907 + 80904711 -GGCTCACCACGGGGACCTGAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGCTTCCCCACCGCGGCCCGGAAGGGCTGCCTGC--CTGCCCGGCGTTCATCCTCGGCAGCGGCCAG---CCCCAGCGCCAGCCGTGCCCACTTCTCTGGGGAGAGGCCAGCTTTTCTTT---CTCCT-GCTCACTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAACTC-AGCGTTCTGGTACA----------------CGGA-GCGGGGGGAAGAGCCTTTCCTTCTGGAAAC----TCTTGAGTGCCTCAAAGGACACG-GGCAGCAGCTG---TGCTGTGGAGACGCCCGGCCTGGGATGGTCCAGGGGACAGG-GTCACGCTGGCCGTGTGGCCTCACAGCACTGCC---CTGGGACACGGGGGCCCTGCTTCCAGGCTCTGTTCAGCCACCACC-TCTCTGCATGACCCGAGGTATCTCTCCAGGCTTCGCTACAAAAACACGGGGGCTGACCTGGTCGCCCACCCTGGGTCCGAATCCTGGGATTCAGCCTTGGGTCGGC------CCA--------TTGGTGGAGACAGCCCTGGTG-CCCGCCCCGGTC--TGGGGAT-GGGAAA-----TGCTCCTTCTGGGCCATACGACTCT--GCTGCCCGGTACAAGGA------CAGCCTG-------TGAGTTTGGGAGGCACTTGTGAGCTACCACTGCTCCGCCTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTACAGAGGAAAAGAGAGATTTCCAGCAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCAGACTAAAAACAAAACAAAAAAAA-TTCTCTTAATGTAAAGGAACGATGATAAGGGCCCCGGGGAGGG--TAGACACTCCCCATTAGCCGTCTCCAGCCCATCAGGCAGGCGCAGCTGCGGAGACGCAGGGCTCTCGGTCCCTGCTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 88649 907 + 80997621 -GGCTCACCACGGGGACCTGAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGCTTCCCCACCGCGGCCCGGAAGGGCTGCCTGC--CTGCCCGGCGTTCATCCTCGGCAGCGGCCAG---CCCCAGCGCCAGCCGTGCCCACTTCTCTGGGGAGAGGCCAGCTTTTCTTT---CTCCT-GCTCACTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAACTC-AGCGTTCTGGTACA----------------CGGA-GCGGGGGGAAGAGCCTTTCCTTCTGGAAAC----TCTTGAGTGCCTCAAAGGACACG-GGCAGCAGCTG---CGCTGTGGAGACGCCCGGCCTGGGATGGTCCAGGGGACAGG-GTCACGCTGGCCGTGTGGCCTCACAGCACTGCC---CTGGGACACGGGGGCCCTGCTTCCAGGCTTTGTTCAGCCACCACC-TCTCTGCATGACCCGAGGTATCTCTCCAGGCTTCGCTACAAAAACACGGGGGCTGACCTGGTCGCCCACCCTGGGTCCGAATCCTGGGATTCAGCCTTGGGTCGGC------CCA--------TTGGTGGAGACAGCCCTGGTG-CCCTCCCTGGTC--TGGGGAT-GGGAAA-----TGCTCCTTCTGGGCCATACGACTCC--GCTGCCCGGTACAAGGA------CAGCCTG-------TGAGTTTGGGAGGCACTTGTGAGCTACCACTGCTCCGCCTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTACAGAGGAAAAGAGAGATTTTCAGCAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCAGACTAAAAACAAAACAAAAAAAA-TTCTCTTAATGTAAAGGAACGATGATAAGGGCCCCGGGGAGGG--TAGACACTCCCCATTAGCCGTCTCCAGCCCATCAGGCAGGCGCAGCTGCGGAGACGCAGGGCTCTCGGTCCCTGCTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 96353 908 + 74645514 GGCCTCACCACGGGGGCCTGAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGCTTCCCCACCACGGCCCGGAAGGGCTGCCTGC--CTGCCCGGCGTTCATCCTCAGCAGCAGCCAG---CCCCAGCGCCAGCCGTGCCCACTTCTCTGGGGAGAGGCcagcttttcttt---ctcct-gctcacTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAACTC-AGCGTTTTGGTACA----------------TGGA-GCGGGGGGAAGAGCCTTTCCTTCTGGAAAC----TCTTGAGTGCCTCACAGGACACG-GGCGGCAGCTG---TGCTGTGGAGACGCCCGGCCTGGGATGGTCCAGGGGACAGG-GTCACGCTGGCCGTGTGGCCTCGCAGCACTGCC---CTGGGACGCGGGGGCCCTGCTTCCAGGCTCTGTTCAGCCACCACC-TCTCTGCGTGACCCAAGGTATCTCTCCAGGCTTCGCTACAAAAACACGGGGGCTGACCTGGGCGCCCACCCTGGGTCTGAATCCTGGGATTCAGCCTCGGGTCGGC------CCG--------TTGGTGGAGACAGCCCTGGTGCCCCTCCCTGGTC--TGGGGATGGGGAAA-----TGCTCCTTCTGGGCCATACGACGCT--GCTGCCCGGTACAAGGA------CAGCCTG-------TGAGTTTGGGAGGCACTTGTGAGCTACCACTGCTCCGCCTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTATAGAGGAAAAGAGATATTTTCAGCAAACATGCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGcagactaaaaacaaaac-aaaaaaa-ttctcttaATGTAAAGGAACGATGATAA-GGCCCCGGGGAGGG--TAGACACTCCCCATTAGCCGTCTCCAGCCCATCAGGCAGGCCCAGCTGCAGAGACGCAGGGCTCTCGGTCCCTGCTGG i papAnu2.chr16 I 207 C 0 s chlSab2.chr16 91142 905 + 75148670 --GCTCACCACAGGGGCCTGAGCCACTTGC-TGG-GGACCTGGCATCCCTGAGGCTTCCCCACCGCGGCCCGGAAGGGCTGCCTGC--CTGCCCAGCGTTCATCCTCAGCAGCGGCCAG---CCCCAGCGCCAGCCGTGCCCACTTCTCTGGGGAGAGGCCAGCTTTTCTTT---CTCCT-GCTCACTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAA--C-AGCGTTTTGGTACA----------------CGGA-GCGGGGGGAAGAGCCTTTCCTTCTGGAAACTCTTTCTTGACTGCCTCAAAGGACACG-GGCGGCAGCTG---TGCTGTGGAGACGCCCGGCCTGGGATGGTCCAGGGGACAGG-GTCACGCTGGCCGTGTGGCCTCACAGCGCTGCC---CTGGGATGCGGGGGTCCTGCTTCCAGGCTCTGCTCAGCCACCAC---CTCTGCATGACCCGAGGTGTCTCTCCAGGCTTCGCTACAAAAACACGGGGGCTGACCTGGGCGCCCACCCTGGGTCTGAATCCTGGGATTCAGCCTCGGGTCGGC------CCG--------TTGGTGGAGACAGCCCTGGTGCCCCTCCCTGGTC--TGGGGAT-GGGAAA-----TGCTCCTTCTGGGCCATACGACTCT--GCTGCCCGGTACAAGGA------CAGCCTG-------TGAGTTTGGGAGGCACTTGTGAGCTACCCCTGCTCCGCCTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTATAGAGGAAAAGAGATATTTTCAGCAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCAGACTAAAAACAAAAC-AAAAAAA-TTCTCTTAATGTAAAGGAACGATGATAA-GGCCCCGGGGAGGG--TAGACACTCCCCATTAGCCATCTCCAGCCCATCAGGCAGGCACAGCTGCAGAGACGCAGGGCTCTCGGTCCCTGCTGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 902338 901 - 1291538 ------TCCACAGTGGCCTGAGCCACTTGC-TGG-ATTCCTGGCATCCCTGAGACTTCCCCACCGTGGTCCAGAAGGGCTGCCTGC--CTGCCTGGAGCTTGTCCTCAGCAGC-GCCAA---CTCCAGTGCCAGCCGTGCCCACTTCGCTGGGGAGAGGCCAGCTTTTCCTTC--CCCCT-GCTTACTCTTGGCTGGATTTGCAATTTGACTGTCACCATGGAAACTC-AGGGTTTTGGTATA----------------TGGGTGCGGGG---AGAGTCTTTCCTCCTGGAGGC----TCTTGACTGCCTCAAAAGATGTGTGGCCACTGCTG---TCCCAAGGAGGCGCCTGGCCT-GGACGGGTCTGGGGATGGGCATCATGCTGGCCATCTGACCTCATAGCGCTGCTGTACTGGGATGTGGGGGGCCTGCTTTCAGGCTCTGCTCAGCCACCACC-TCTCTCTGTGGCCCCAGGCATCTCCCCAAGCTGCGCTGCAAAAACAGAGAGGCTGAGCTGGGCACCCACTCGGGGTCTAAATCCTGGGATTCAACCTCGGGTCAGC------CCA--------TTGGTGGATGTAGCCCTGGTG-CCCTCGCTGGTT--AGGGTTG-GGGAGA-----GGCTCCCTCTGGACCACGCAGCACT--GCTGCCT-GCACAAGGG------CAGCCAGCAGCCTGTGGGTTTCGGAGGCACTCGTGAGCTACGGCTGCTCTGCTTGGAGGCTCCCAAA-GCCCCCAGAAATTATGGGAATTATAGAGGAAGAGAGATATTTTCAGCAAACATTCTGCCAAGCCAAAGCAGATGGTGGAAAATTTTGCATACTAAAAACACA---ACA-----TTTTT-TAATGTAAAGGAATGGTGATAC-GGCCTCACAGAGTG--TAGACAGTCTGAATTAGCCCTCTCCAGCCCACCAGCCAGGCACAGCTGCAGAGACACCGGGCTATCTGTCCCTTCTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75839566 842 + 122082543 ----GCTACCTGACTTCCTGGTCCACTGGT-TGGAGGACCTGATGTCCCTGAGATTTTCCCATCA------------------------TGCTGGGCCCTCAACCTCAGCAGTGGCTGGGGAGCTTAGAACTAACCCGGCCTGTTTCTCTGGGGATGGGCAGGTTTTTTTCCCCTCTCTA-GTTCATTCTTGGATGGATTTGCAATTTGACTGTCACCATGGAAACTCTTGAGCTTTGGTACATGAGGCGGGTTGGGGGTGGG-GTGGGGTGGGAACTCTTCCTTTTTGGAAAATCTCCCTTGA-TGCCTCACAGGACACA-TGTGGCAGCTG---CC---------GACCCAG-CTGCAATGGCTCAGGGGACAGG------GATGGC-------------------GGA---CTAGAA---------CCTGTCTCCAGGCCCTGCTTGGCCATTGCCTTTTCTCCATGATCCTAGGCACCTCTTCAAGATTCATGGCAAAACCCAAGAGGCTGACCCAGCAGCT--------GCCTGTGT----AGACGTAGCGTGAGGTCAGC------TCA--------GTAGTGGACAGGCTGCTGCTGTCCCTGTCTAATTGAAAAAACC-AGGAAACTATCTTCCCGTCCTGAGCCATGCCACATCCACCTGCCCAGTGCAAAGATGGCGGCAGGCTG-------CGAGCTTGGGAGACCCTGGGGAATAGTGACTGCTCTGCTCCAAGGAGCCCAAA-GTCTCCGGAAGCTCTGGGAGTTAGGGAAGTACGGAGATATTT----CTAACATCCTGCCAAGAAGCAGCAGATGGTGGGAAATTTTGCATACTAAAAACAAC---AAAAAAT-ATTTT-TAACGTAAAGGAAAGACAGTTA-GGCCTTGGGGAGGG------------CAATGAACCTTCCAGAG-CCATCAGACTGGCACA---GCACAGATGCAG------TTGGCCCTGCCAG i mm10.chr11 C 0 I 54 s canFam3.chr9 15662207 888 - 61074082 -----TGGCCTGAGACCCTGGACCTCTTGCTTGG-GGAGCTGTCATCTCTGAGATTTTCCCATCATGCCCCAGAAGGGGTGCCCCCCTCTGCTTGGCTCTCATGCTTAGCAGCGGCCGG---CCCCAGTGCCAGCCATGCCCACTTCTCTGGGGATAGGCCAGATTTTTTTCT--TTCCTGGCTCACTCTTAGATGGATCTGCAATTTGACTGTCACCATGGAAACTT-AGAGTTTTGGTACA----------------TGAA-G-GTGGGGGGAAGTCTTCCCTTTTGGAAAGTCTTTTCTGACTCCCTCAAAGGACACA-TGTGGCAGCTGGCATCCTGTGAAGACACCTCGCCTGGGATGGTCCAGGCGAGAGGTAGGATGCTGACCACTTGACCTCATagcaccata---ctgggatttgggtgacctaatttctggctcttctctgccaccacc-tctctttgtgaccctgggcaTCTCTCAGGGGT------CACACACAGAGAATCCAACCTGGACAGCTACTC--GGTCTGAATCCTAGGATTCAACTTCAGATTAGCTCTATTTCA--------TCAGTAGAGGGATCCC-AGTGTTCCTCTCTGGTG---------------A-----TGTGACTTCTGGGCCACAACATCCG--CCTGCCTGGCACAAGAA------CAGCCCA-------GGAGCCTGGGAGGCACTTGCGAGCTGCTGCTGTTCCACTTGGAGGCTTCCAAAGGCCCCCCAAAACTACGGGAATTAGAGAGGAAGAGAGATATTTTCAGCAAACATTCTGCCAAGGCAAAGCAGATGGTGGAAAATTTTGCATACTAAAAACA-----AAATAAT-TTTTTTTAATGTAAAGGGAAGATGATAA-GGCCCTGGGGAATGCATAGACATCCCCAATTAGCCTTACTCTGCCTACCAGGCTG---CAGA-GGGGAGCCGCAGGACTGTC---CCCTGG--- i canFam3.chr9 C 0 C 0 a score=220741.000000 s hg38.chr17_GL383563v3_alt 179063 79 + 375691 GACAGGGGACGGCTGCTCCACCTGCACACAGGGTAGGGTCCTTGGCCTGAAGTCCCACTGAGATGTCTCCCAAGGCTGG s panTro4.chr17 165089 79 + 82630442 GACAGGGGACGGCTGCTCCACCTGCACACAGGGTAGAGTCCGTGGCCTGAAGTCCCACTGAGATGTCTCCCAAGGCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 62543 79 + 73212453 GACAGGGGACGGCTGTTCCACCTGCACACAGGGTAGGGTCCGTGGCCTGAAGTCCCACTGGGATGCCTCCCAAGGCTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 126852 78 - 81552678 GACAGGGGACGGCTGCTCCACCGGCACACAGGGCAGGGTCCGTGGCCTGAAGT-CCACTGAGATGGCTCCCAAGGCTGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 88725 79 + 80904711 GACGGGGGACGGCCGCTCCACCTGCACGCAGGGTAGGATGCGGGGCCTGAAGTCCCACTGAGATGCCTCCCAAGGCCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 89556 79 + 80997621 GACGGGGGACGGCCGCTCCACCTGCACGCAGGGTAGGATGCGGGGCCTGAAGTCCCACTGAGACGCCTCCCAAGGCCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97261 78 + 74645514 GACGGGGGACGGCCGCTCCACCTGCACGCAGGGTAGGATGTGGGGCCTGAAGTCCCACTGAGATGCCTCCCAAGG-CCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 92047 78 + 75148670 GGCGGGGGATGGCCGCTCCACCTGCACGCAGGGTAGGATGCGGGGCCTGAGGTCCCACTGAGATGCCTCCCAAGG-CCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 903239 75 - 1291538 GATA--GGACGGATGCTCCTTCT-CACACAGGGCAGGCTCCGT-GCCTGAAATCCCACAGAGATGTCTTCCCAGGCTGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15663095 78 - 61074082 GACAGGCGAGAGCTGCCTCACTTCTAAATAGAGCCAGGCCTGCAGACTGAA-TCCCACTGAGATGCCTCCCAAGTCTGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75840408 54 + 122082543 I a score=198602.000000 s hg38.chr17_GL383563v3_alt 179142 70 + 375691 GGCTCCATCTTGGTGGCAGCTGgaggggagcctggggtg----ggggagtcaccggctctgagacttgggttgg s panTro4.chr17 165168 70 + 82630442 GGCTCCATCTTGGTGGCAGCTGgaggggagcctggggtg----ggggagtcaccgactctgagacttgaattgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 62622 70 + 73212453 GGCTCCATCCTGGTGGCAGCTGGAGGGAAGCCTGTGGTG----GGggagtcaccggctctgagacttgggttgg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 126930 70 - 81552678 GGCTCCATCTTGGTGGCAGcaggaggggagcctggggtg----ggggagtcaccggctctgagacttgggttgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 88804 69 + 80904711 GGCTCcatcttggtggcagcaggaggggagtctggggt-----ggggagtctctggctctgagacttgggttgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 89635 69 + 80997621 GGCTCCATCTCGGTGGCAGCAGGAGGGGAGTCTGGGGT-----GGGGAGTCTCTGGCTCTGagacgtgggttgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97339 69 + 74645514 GGCTCCATCTTGGCGGCAGCAGGAGGGGAGTCTGGGGT-----GGGGAGTCTCTGGCTCTGAGACTTGGGTTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 92125 67 + 75148670 GGCTCcatcttggtggcagcaggaggggagtc--gggt-----ggggagcctctggctctgagacttgggctgg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 903314 62 - 1291538 GGCTCCCTCTTGGTGTCAGCAGAGGG--------GAGTG----AGGGAGTCACCAGCTCTGagacttggcgtgg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75840462 64 + 122082543 GTCCCTGTCCGGGTGGCAGCAGGTGGGGGTCATGGCATGTGATGAGGTGCCCCT--------GACTTGGGTT-- i mm10.chr11 I 54 C 0 s canFam3.chr9 15663173 58 - 61074082 GGCTC-----TGGTGGTAGCAGGAGGAAGGTATGGGGTGGT--GAAGAGGCACTGGCCT---------GGTTGG i canFam3.chr9 C 0 I 33 a score=191783.000000 s hg38.chr17_GL383563v3_alt 179212 76 + 375691 tgtcctgcctctgccacctcccagtggtataactttaggccagtttcctatttTTTAtttttagtttttgtaaaga s panTro4.chr17 165238 76 + 82630442 tgtcctgcctctgccacttcccagtggtatgactttaggccagtttcctatttTTTAtttttagtttttgtaaaga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 62692 76 + 73212453 tgtcctgcctctgccacttcccagcggtatgactttaggccagtttcctattttttatttttattttttgtaaaga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 127000 76 - 81552678 tgtcctgcctctgccacttcccagcagtatgactttaggccagtttcctactttttatttttattttttgtaaaGA i nomLeu3.chr19 C 0 M 710 s rheMac3.chr16 88873 70 + 80904711 tgccctgcctctgccacttcccagtggtatgactttaggccggtTTCCGA------Gttttcacttttcgtaatga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 89704 70 + 80997621 tgccctgcctctgccacttcccagcggtatgactttaggccggtttccta------Gttttcacttttcgtaatga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97408 70 + 74645514 tgccctgcctctgccacttccCAGCGGTATGACTTTAGGCCAGTTTCCTA------GTTTTCACTTTTTGTAATGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 92192 70 + 75148670 tgccctgcctctgccacttcccagcggtatgactttaggccagtttccta------Gttttcgctttttgtaatga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 903376 69 - 1291538 tgtcc-gcctctgccacttcccagtggtatgactctgggccagtTTCCTa------ttcttcatttttggtagaga i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75840526 38 + 122082543 ---------TCTGTCATTTTCCAGCTGTGCCCCCTTAGGCTGTTTTC----------------------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15663231 33 - 61074082 I a score=403318.000000 s hg38.chr17_GL383563v3_alt 179288 201 + 375691 catcatctccctatttgccagggctggtctgtaactcctgggctcaaacaatcctcccgcctcg---------------gtctcccaaagtgctgagattacaggcgtgagtgcccggccctggagcagtcctttacctctctgtgtgctcaggggctcgcctgcggaaaggggga-tggggactctcaccccgggttgtcgtgagggtcaaaagga s panTro4.chr17 165314 216 + 82630442 catcatctccctatttgccagggctggtctgtaactcctgggctcaaacaatcctcccgcctcgatctcccccgcctcggtctcccaaagtgctgagattacaggcgtgagtgcccggccctggagcagtcctttacctctctgtgtgctcaggggctcgcctgcggaaaggggga-tggggactctcaccccgggttgtcgtgagggtcaaaagga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 62768 201 + 73212453 catcatctccctatttgccagggctggtctctaactcctgggctcaaacaatcctcctgcctcg---------------gtctcccaaagtgctgagattacaggtgtgagtacccggcccTGAAGCagtcctttacctctctgtgtgctcaggggctcgcctgtgggaaggggga-tggggactctcacccagggttgtcctgagggtgaaaagaa i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 88943 197 + 80904711 cgtcgtctccctacttgccagggctggtctctaactcctgggttcaagcaatcctcctgcc-cg---------------gcctcccaaagtgctgagatcacaggcgtgagTGTCCAGCCCTGGAGCAGTCCTCTAC----CTGTGTGCTCAGGGGCTCACCTGTGGAAAGGGGGATTGGGGGCTCCCACCCCGGGTTGTCGTGAGGGTCAAAAGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 89774 197 + 80997621 cgtcgtctccctacttgccagggctggtctctaactcctgggttcaagcaatcctcctgcc-cg---------------gcctcccaaagtgctgagatcacaggcgtgagtgtccagccctggagcagtcctctac----ctgtgtgctcaggggctcacctgtggaaagggggattgggggctcccaccccgggttgtcgtgagggtcaaaagaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97478 197 + 74645514 CGTCGTCTCCCTacttgccagggctggtctctaactcctgggttcaagcaatcctcctgcctcg---------------gcctcccaaagtgctgagatcacaggcgtgagtgTCCGGCCCTGGAGCAGTCCTTTAC----CTGTGTGCTCAGGGGCTC-CCTGTGGAAAGGGGGATTGGGGGCTCCCACCCCGGGTTGTCGTGAGGGTCAAAAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 92262 198 + 75148670 cgtcgtctccctatttgccagggctggtctctaactcctgggttcaagcaatcctcctgcctcg---------------gcctcccaaagtgctgagatcacaggcgtgagtgtccggccctggagcagtcctttac----ctgtgtgctcaggggctcacctgtggaaagggggattcggggctcccaccccgggttgtcgtgagggtcaaaagaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 903445 201 - 1291538 cgtcatctccctatttgccaaggctggtcgctcactcctgggttcaagtaaccctcccacctcg---------------gcctcccaaagtgatgggattacaggtgtgagTGCCCAGCCATGGGCCAGTCCTTTACTAACCTGTGTGCTCAGCAGCTCACCTGTGGAATGGGGGG-TGGGGGCTCGTGCCCCGAGGTGTCACGAAGGTCAAGAGAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75840564 74 + 122082543 ---------------------------------------------------------TGTCCCT---------------GTCT------ATGCTCAG------------------------TGGAG---------------CCGTGGGT-----------------GAAGGATGGA---------TCCCTCTCTAGTGGCTATGAGCATTCAACAAA i mm10.chr11 C 0 C 0 e canFam3.chr9 15663231 33 - 61074082 I e nomLeu3.chr19 127076 710 - 81552678 M a score=468422.000000 s hg38.chr17_GL383563v3_alt 179489 241 + 375691 gtaacgcggtcggcatctggcctgtggtaggtgcttgataggcaagag----ctGTTACATTTCAGAGGCAGCTGGAACTCACGGGCCCACACCATGCAGCACAG-GCTG-GCC-CTGG-------------GGTGCCCAGGCCAACCTCGCA--GGTGGACTCTCCCCTTTCGAGGAAGTGTGGATTCCCAAGCTGGGCTTTGTAGGACACCCAGGACACAGGATGCCT-TCAGAagtcattcagaggcagagctgggatttg s panTro4.chr17 165530 241 + 82630442 gtaacgtggtcggcatctggcctgtggtaggtgcttgataggcaagag----ctGTTACATTTCAGAGGCAGCTGGAACTCACGGGCCCACACCATGCAGCACAG-GCTG-GCC-CTGG-------------GGTGCCCAGGCCAACCTCGCA--GGTGGACTCACCCCTTTCGAGGAAGCGTGGATTCCCAAGCTGGGCTTTGTAGGACACCCAGGACACAGGATGCTT-TCAGAagccattcagaggcagagctgggatttg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 62969 195 + 73212453 gtaacgcGGTCGGCATCTGGCCTGTGGTAGGTGCTTGACAGGCAAGAG----CTGTTACACTGGAGA-------------------------------------------------TGG-------------GGTGCCCAGGCCAACCTCGCA--GGTGGACTCACCCCTTTCGAGGGAGTGTGGATTCCCAAGCTGGGCTTTGTAGGACACCCAGGACACAGGATGCCT-TCAGAagccattcagaggcagagccgggatttg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 89140 217 + 80904711 G-AATGCGGTCAGCGTCTGGCCTGTGGTAGGTGCTTGATAGG-AAAAG----CTGTTACAGTGGAGA-----------------------CGCCACGCAGCACAGCGCTG-GCC-CTGG-------------GGTGCCCGGGCCAACCTCGCA--GGTGGACTCACCCCTTTTGAGGGAGCTTGGGTTCCCAAGCTGGGCTTTGGAGGACACCCAGGACACAGGATGCCT-TCAGAagccattcagaggcagagctgggatttg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 89971 217 + 80997621 g-aatgcggtcagcgtctggcctgtggtaggtgcttgataGG-AAAAG----CTGTTACAGTGGAGA-----------------------CGCCACGCAGCACAGCGCTG-GCC-CTGG-------------GGTGCCCGGGCCAAACTTGCA--GGTGGACTCACCCCTTTTGAGGGAGCGTGGGTTCCCAAGCTGGGCTTTGGAGGACACCCAGGACACAGGATGCCT-TCAGAagccattcagaggcagagctgggatttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97675 217 + 74645514 G-AATGCGGTCGGCATCTGGCCTGTGGTAGGTACTTGATAGG-AAAAG----CTGTTACAGTGGAGA-----------------------CGCCACGCAGCACAGTGCTG-GCC-CTGG-------------GGTGCCCGGGCCAACCTCACA--GGTGGACTCACCCCTTTTGAGGGAGCGTGGGTTCCCAAGCTGGGCTTTGTAGGACACCCAGGACACAGGATGCCT-TCAGAAGCCAttcagaggcagagctgggatttg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 92460 218 + 75148670 g-aatgcggtcggcgtctggcctgtggtaggtgcttgataggcaaaag----ctGTTACAGTGGAGA-----------------------CGCCACATAGCACAGCACTG-GCC-CTGG-------------GGTGCCCGGGCCAACCTCGCA--GGTGGACTCACCCCTTTTGAGGGAGCGTGGGTTCCCAAGCTGGGCTTTGTAGGACACCCAGGACACAGGATGCCT-TCAGAAGCCATTCAGAGACAGAGCTGGGATTTG i chlSab2.chr16 C 0 I 126 s calJac3.chrUn_GL286409 903646 225 - 1291538 T-AGT---GTCGGCATCTGACCTGTGGCAGGTCCCTGATGGGTAAGAG----CTGTTGTACTGGAGAGGCCTCTGAAACTCAGGGACCTACACTTCACAGCACTGGTCTG-GCC-CCAG-------------GAT------GCCAACTTCACA--GCAGGGCTCACCTCTTTCGGGGGAGTGTGGATTCCCAAGCTGGGCTTTGTAGGACA-CCAGGGCACAGGGTGCCT-TCAGAAGCCATTCAGAGAC------TGGATTTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75840638 187 + 122082543 G--------------------CCCAGGGACATACATCATGGG----------CTCATGTCCTCTAGC---------------------------ACGGTGCATGTTTCTATGCT-CTGG-------------G----CCCAGCCCACCTCACA--GGGGAGGCTGGCTGTTCTGAGGGAGTGTGGATGCTCCAGCCATGTTTCACAGGGTAAGGAGAGAGCAGGATCCCTCTCAGAGCATGGTTAGAGGCTGGGCTGGCATTCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15663264 240 - 61074082 ---GTAACACAGGTATCTGGCACATGGTAGGAGCTTTTTACTTGAGGGACTCTTCCTGAATTCGTGG-------------------CCCACACCACATGGCACGTGGCTG-GCCTCTGGAGTTAGAACGTTTGGTGCCAGGGCCAACCTCACAGGGGTGGACTCGCCTTCCCCAAGGGGGCTTAGATTCCTAGGTTGTGTTGCACAGGACATTGGAGGCACGAGATGCCT-TCAGGGGCCATTTGCAGGCTGAGCTGAGATGTG i canFam3.chr9 I 33 C 0 e nomLeu3.chr19 127076 710 - 81552678 M a score=24137.000000 s hg38.chr17_GL383563v3_alt 179730 9 + 375691 aacccaggc s panTro4.chr17 165771 9 + 82630442 aacccaggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 63164 9 + 73212453 aatccaggc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 89357 9 + 80904711 aacccaggc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 90188 9 + 80997621 aacccaggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97892 9 + 74645514 aacccaggc i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 903871 9 - 1291538 TATCCAGGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75840825 9 + 122082543 AACCCATGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15663504 9 - 61074082 AGCCCAGGC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 92678 126 + 75148670 I e nomLeu3.chr19 127076 710 - 81552678 M a score=18285.000000 s hg38.chr17_GL383563v3_alt 179739 53 + 375691 ctttctattgccagacaccccgct-tttccacctcaccaagcACGCAGGATGCC s panTro4.chr17 165780 53 + 82630442 ctttctattgccagacacaccgct-tttccacctcaccGAGCACGCAGGATGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 63173 53 + 73212453 ctttctattgccagaaacatcgct-tttccacctcaccGAGCACGCAGGACGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 127788 52 - 81552678 CTTTCTATTGCCTGA-ACATCGCT-TTTCCACCTCACCGAGCACGCAGGATGCC i nomLeu3.chr19 M 710 C 0 s rheMac3.chr16 89366 8 + 80904711 ctttctat---------------------------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 90197 8 + 80997621 ctttctat---------------------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97901 8 + 74645514 ctttCTAT---------------------------------------------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 903880 53 - 1291538 CTTTCCACTGCCAGAAACATCCCT-TTTCCACCTCACAGAGCGGGCAGGACGCC i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75840834 48 + 122082543 CCATCTTTGGCTGCAAGCCTTGTT-TTCCCACCTTGCCCAG-----AGTATACC i mm10.chr11 C 0 I 5 s canFam3.chr9 15663513 54 - 61074082 CTAGCTCCTGCTGACACCTCTGCTCTTTCCTCCCCACACAGCAGGCAGGGCACC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 92678 126 + 75148670 I a score=4954115.000000 s hg38.chr17_GL383563v3_alt 179792 1800 + 375691 CCAGGGTCCTGCCTGACCCTAACGGCTCTATCCCCTCAGAAATCCTCCTCTCCAGGCG-GCCAGTCCCCTCTCGGTCTCCCCACCATGCTCTTCTGTGCCCTC--TCTGGACCCTTTTTCTGTcgcag-cagaggctgcagtgtgggag--agagctctagttcactctcagcagctagggttgagctctggtcctgccttggatgctcttgggcaaataccttaatctttttcaacctcagtct-tcccatctgtaaaatggagacaaaaataactacta-------------agtaggacaaacagctttgcaaattta---------------------aaaggctatacaagcctatacatatttttaAAAAATTAGAATCTAATCCA-CCCCCTCCAGGAACCCATTCAAATCATTTCTCCACTGAAAAGTCTC--AATCCTCACGGGCAAAATGCCAATGGAAAGAAGC-AGGGAAGACGCAACCTCCCTC-CTCTCCCCA---------------------------CCCAGATGCTGTCTGGC-TTGCATTTCAGCTCCTACCAATGCCTGCCTCAACTTCCTCAACATATTCAGGCACCACTCGAGGGCAAGGCCA------TACCTAA--AGGCAAGTGTCCCTTC-CCTCAGC-CCCACTGCTGGGTTTTGGGCAAAGCGGTTACTCAGGAAATACTTGCTGACTGTTTTCCTGAAAATGCTCCCC----AGGACAGGAAACCGCACTGTACAAAGACAGCAGGGCCAGCTGG-GGTCAGCAAGGGGTGGGCCACAGAGGGAAAGGAGACCCCAGA-CCCCATCTGTCACCTCCATGTCCCCCAAAGAGCTGGGGTTTC-----------------CCCCAGGACAAGCGCTGGGCAAG----CAGCCCTTCTGAGCCACGACGGAGGGACCTCAGGGATGCCAGGCCCCT-CTCCCAG-CCTCCCCTGA----AGGGACACTC-AGGG-----------GGATGCTTGGTGGCCTCAGCCT-GGCAAAAAACAGCTGAAT-GGGGAGGGGCTGTAGGA--GGCT-GCTT-CCATGGCCATGGATGAGTGGGTCCTGGGGGAGAG--------------------TGCCCGGTTCAC--ACAGCCTGC---TCTTCCAAACCCACCTCCGGGCCAGGGTGCAGGGTTGGGGGA--AACACGCTCTTCCTTTGGTTTGGAAACTCCCTGCAGGT----------TGTGGGTCTGGAAAGGGAGAAAGGGGGCTCTGAGGCCCAGAGGGCCTGTCCGCTTAGGGAGGGGTCCACTGGCAGCCAGAAGCAGCTCAGAGCCTGCCCCTCCCTCCCTCCCTCAGGGACCCTGGAGCCAGGAGATATGGGGTGTGCTTCTGGCCCTTTGCTGGCTACC-ACCTGACCACCCCTGACAGCCACAGGACTACCTCAGAGGGCTGGAGAGGACATGGTACCTGGGGAGCGCTGCTTCCTTGGTCCCCCTTCCAGGCTGCCATGGAAAGGCCCCCGAGGACAGCCCCAGGCACG-GGAGCTGAT----GGGCACAGACAGGGCTGGGAATCCAGGTCTGGGGAGTGGAGGAGGGCGTCCTGCACTTGCTTATTCATTTACCATCGATTTTCATTTACTCCCTCCTTCAGGCCCAGAGACAGACAGGAGGCACCAGATAACGAAGACAAATCCTCAAATCGATAGAGATGTGGTCACCAGCATCGAAATCTCACAGT-CCCTGCACTCGCTTGAGGAGCTCCAGATAGAATG-------------------------AAAGGTGGATGGACGGAAGAAGAGATCGGCTCCCTCCAGAGAGAACG------------CGAAGTGCGGGGGACCATTCAGGGAGAGAGGGGCACtcagtaagggcttcctggacgagctggaatttaaggatgggcataattt----agacaca----aaagctgaggctggggtgtgccaggcatcctggacagagaacaggaaa s panTro4.chr17 165833 1799 + 82630442 CCAGGGTCCTGCCTGACCCTAACGGCTCTATCCCCTCAGAAATCCTCCTCTCCAGGCG-GCCAGTCCCCTCTCGGTCTCCCCACCATGCTCTTCTGTGCCCTC--TCTGGACCCTTTTTCTGTCGCAG-CAgaggctgcagtgtaggag--agagctctagttcactctcagcagctagggttgagctctggtcctgccttggatgctcttgggcaaataccttaatcttttttaacctcagtct-tcccatctgtaaaatggagacaaaaataactacTA-------------AGTAGGACAAACAGCTTTGCAAATTTA---------------------AAAGGCTATACAAGCCTATACATATTTT-AAAAAATTAGAATCTAATCCA-CCCCCTCCAGGAACCCATTCAAATCATTTCTCCACTGAAAAGTCTC--AATCCTCATGGGCAAAATGCCAATGGAAAGAAGC-AGGGAAGACGCAACCTCCCTC-CTCTCCCCA---------------------------CCCAGATGCTGTCTGGC-TTGCATTTCAGCTCCTACCAATGCCTGCCTCAACTTCCTCAACATATTCAGGCACCACTCGAGGGCAAGGCCA------TACCTAA--AGGCACGTGTCCCTTC-CCTCAGC-CCCACTGCTGGGTTTTGGGCAAAGCGGTTACTCAGGAAATACTTGCTGACTGTTTTCCTGAAAATCCTCCCC----AGGACAGGAAACCGCACTGTACAAAGACAGCAGGGCCGGCTGG-GGTCAGCAAGGGGTGGGCCACAGAGGGAAAGGAGACCCCAGA-CCCCATCTGTCACCTCCATCTCCCCCAAAGAGCTGGGGTTTC-----------------CCCCAGGGCAAGCGCTGGGCAAG----CAGCCCTTCTGAGCCACGACGGAGGGACCTCAGGGATGCCAGGCCCCT-CTACCAG-CCTCCCCCAA----AGGGACATTC-AGGG-----------GGATGCTTGGTGGCCTCAGCCT-GGCAAAAAACAGCTGAAT-GGGGAGGGGCTGTAGGA--GGCT-GCTT-CCATGGCCACAGATGAGTGGGTCCTGGGGGAGAG--------------------TGCCCGGTTCAC--ACAGCCTGC---TCTTCCAAACCCACCTCCGGGCCAGGGTGCAGGGTTGGGGGA--AACATGCTCTTCTTTTGGTTTGGAAACTCCCTGCAGGG----------TGTGGGTGTGGAAAGGGAGAAAGGGGGCTCTGAGGCCTAGAGGGCCTGTCCTCTTAGGGAGGGGTCCACTGGCAGCCAGAAGCAGCTCAGAGCCTGCCCCTCCCTCCCTCCCTCAGGGACCCTGGAGCCAGGAGATATGGGGTGTGCTTCTGGCCCTTTGCTGGCTACC-ACCTGACCACCCCTGACAGCCACAGGACTACCTCAGAGGGCTGGAGAGGACATGGTACCTGGGGAGCACTCCTTCCTTGGTCCCCCTTCCAGGCTGCCACGGAAAGGCCCCCAAGGACATACCCAGGCACA-GGAGCTGAT----GGGCACAGACAGGGCTGGGAATCCAGGTCTGGGGAGTGGAGGAGGGCGTCCTGCACTTGCTTATTCATTTACCATCGATTTTCATTTACTCCCTCCTTCAGGCCCAGAGACAGACAGGAGGCACCAGATAATGAAGACAAATCCTCAAATCAATAGAGATGTGGTCACCAGCATCGAAATCTCGTGGT-CCCTGCACTCGCTTGAGGAGCTCCAGATAGAATG-------------------------AAAGGTGGATGGACGGAAGATGAGATCGGCTCCCTCCAGAAAGAACA------------CGAAGGGCAGGGGACCATTCAGGGAGAGAGGGGCACTCAGTAAGGGCTTCCTGGAAGAGCTGGAATATAAGGATGGGCATAATTT----AGACACA----AAAGCTGAGGCTGGGGCGTGCCAGGCATCCTGGACAGAGGACAGGAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 63226 1795 + 73212453 CCAGGGTCCTGCCTGACCCTAACGGCTCTATCCTCTCAGAAATCCTCCTCTCCAGGCG-GCCAGTCCCCTCTCAGTCTCCCCACCATGCTCTTCTGTGCCCTC--TCTGGACCCTTTTTCTGTcgcag-cagaggctgcagtgtgggag--agagctctagttcactctcagcagctagggttgagctctggtcctgccttggatgctcctgggcaaataccttaatctttttcaatctcagtct-tcccatctataaaatggagacaaaaataactacTA-------------AGTAGGACAAACAGCTTTGCAAATTTA---------------------AAAGGCTATACAAGCCTATACATATTTT-TAAAAATTAGAATCTAATCCA-CCCCCTCCAGGAACCCATTCAAATCATTTCTCCACTGAAAAGTCTC--AATCCTCACGGGCAAAATGCCAATGGAAAGAAGC-AGGGAAGATGCAACCTCCCTC-CTCTCCCCA---------------------------CCCAGATGCTGTCTGAC-TTGCATTTCAGCTCCTACCAATGCCTGCCTCGACTTCCTCAACAGATTGAGGCACCACTCGAGGGCAAGGCCA------TACCTAA--AGGCACGTGTCCCTTC-cctcagc-cccactgctgggctttgggcaaagcgggtattcaggaaatacttgctgactgaTTTCCTGAAAATCCTCCCC----AGGGCAGGAAACTGCGCTGTACGAAGACAGCAGGGCTGGCTGG-GGTCAGCAAAGGGTGCGCCGCAGAGGGAAAGGAGACCCCAGA-CCCCATCTGTCACCTCCATCTCCCCCAAAGAGCTGAGGTTTC-----------------CCCCAGGACAAGCGCTGAGCAAG----CAGCCCTTCTGAGCCACGACGGAGGCACCTCAGGGATGCCAGGAGCCT-CTCCCAG-CCTCCCCCGA----AGGGACACTC-GGGA-----------GGATGC-TGGTGGCCTCAGCCTGGGCAAAAAACAGCTGAAT-GGGGAGGGGCTGTAGGA--GGCT-GCTT-CCATGGCCACAGATGAGTGGGTCCTGGGGGAGAG--------------------TGTCCGGTTCAT--GCAGCCTGC---TCTTCCAAACCCACCTCCGGGTCAGGGTGCAGGGTTGGGGGA--AACACGCTCTTCCTTTGGTTTGGAAACTCCCTGCAGGG----------TGTGGGTCTGGAAAGGGAGAAAGGGGGCTCTGAGGCCTAGAGAGCCTGTCCTCTTAGGGAGGGGTCCACTGGCAGCCATAAGAGGCTCAGAGCCTGCCCCTCCCTCCCTCCCTCAGGGACCCTGGAGCCAGGAGATATGGGGTGTGCTTCTGGCCCTTTGCTGGCTACC-ACCTGACCACCCCTGACAGCCACAGGACTACCTCAGAGGGCTGGAGAGGACGTGGTACCTGGAGAGCGCTGCTCCCTTGGTCCCCCTTCCAGGCTGCCATGGAAAGGCCCCCAAGGACAGCCCCAGGCCCG-GGAGCTGAC----GGGCACAGACAGGGCTGGGAATCCAGGTCTGGGGAGTGGAGGAGGGCATCCTGCACTTGCTTATTTATTTATCATCGATTTTCATTTATTCCCTCCTTCAGGCCCAGAGACAAACAGGAGGCACCGGATAATGAAGACAAATCCTCAAATCAAT--AGATGTGGTCACCAGCATTGAAATCTCGTGGT-CCCTGCACTTGCTTGAGGAGCTCCAGATAGAATG-------------------------AAAGGTGGATGGATGGAAGATGAGATCAGCTCCCTCCAGAGAGAACG------------CGAAGGGCGGGGGACCATTCAGG--GAGAAGGATAgtcagaaagggcttcctggaagagctggaatttaaggatgggcataattt----agataca----aaagctgaggccggggcgtgccaggcatcctggacagagaacaggaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 127840 1796 - 81552678 CCAGGGTCCTGCCTGACCCTAACGGCTCTATCCCCTCAGAAATCCTCC-CTCCAGGCG-GCCAGTCCCCTCCCGGTCTCCCCACCGTGCTCTTCTGTGCCCTC--TCTGGACCCTTTTCCTGTCACAG-CAGAGGCTGCAGTGTGGGGG--AGATCTCTAGTTCACCCTCAgcagctagcgttgagctctggtcctgccttggatgctcctgggcaaacaccttaatctctttcaacctcagtct-tcccatctgtaaaatggagacaaaaataactacca-------------agtaggACAAACGGCTTTGCAAATTTA---------------------AAAGGCTACACAAGCCTATAAATATTTT-TAAAAATTAGAATCTAATCCA-CCCCCTCCAGGAACCCATTCAAATCATTTCTCCACTG--AAGTCTC--AATCCTCATGGGCGAAATGCCAATGGGAAGCAGC-AGGGAAGATGCAGCCTCCCTC-CTCTCCCCA---------------------------CCCAGAGGCTGTCTGGC-TTGCATTTCAGCTCTGACCAAGGCCTGCCTCGACTTCCTCAACAGATTCAGGCACCACTCGAGGGCAAGGCCA------TACCTAA--AGGCACGTGTCTCTTC-CCTCAGC-CCCACTGCTGGGTTTTGGGCAAAGCGGTTACTCAGGAAATACTTGCTGACTGTTTTCCTGAAAATCCTCCCC----AGGACAGGAAACTGCTCTGTACAAAGACAGCA-GGCCGGCTGG-GGTCAGCAAGGGGTGGGCCACAGAGGGAAAGGAGACCCCAGAGCCCCATCTGTCACCTCCATCTCCCCCGAAGAGCTGAGGTTTC-----------------CCCCAGGACAAGCGCTGGGCAAG----CAGCCCTTCTGAGCCACGACAGAGGAATCTCAGGGATGCCAGGCACCT-CTCCCAG-CCTCCTCCAA----AGGGACACTC-AGGG-----------GGATGCTTGGTGGCCTCAGCCTGGGCAAAAAACAGCTGAATAGGGGGGGGGCTGTAGGA--GGCT-GCTT-CCATGGCCATGGATGAGTGTGTCCTGGGGGAGAG--------------------TGCCCGGTTCAC--ACAGCCTGCTCTTCTTCCAAACCCACCTCT-GGCCGGAGTGCAGGGTTGGGGGA--AACAAGCTCTTTCTTTGGTTTGGAAGCTCCCTGCAGGG----------TGAGGGTCTGGAAAGGGAGAACAGGGGCTTCGAGGCCTAGAGAGCCTGTCCTCTTAGGGAGGGGTCCACTGGCAGCCATAAGAGGCTCAGAGCCTGCCCCTCCCTCCCTCCCTCAGGGACCCCGGAGCCAGGAGATAT-GGGTGTGCTTCTGGCCCTTTGCTGGCTACC-ACCTGACCACCCCTGACAGCCACAGGACTACCTCAGAGGGCTGGAGAGGACGTGGTAGCTGGGGAGCCCTCCTTCCTTGGTCCCCCTTCCAGGCTGCCACGGAAAGGCCCCCGAGGACAGCCCCAGGCAGG-GGAGCTGAT---GGGGCACAGACAGGGCTGGGAATCCAGGTCTGGGGAGTGGAGGAGGGTGTCCTGCGCTTGTTTATTCATTTACCATCGATTTTCATTCACTCCCT-CTTCAGGCCCAGAGACAGACAGGAGGCACCGGATAATGAAGACAAATCCTCAAATCAACAGAGATGTGGTCACCAGCATTGAAATCTCGTGGT-CCCTGCACTCGCTTGAGGAGCTCCAGATAGAATG-------------------------AAAGGTGGATGGGCGGAAGATGAGATCAGCTCCCTCCAGAGAGAACG------------CGAAGGACGGGGGACCGCTCAGG--GAGAGGGGTAGTCAG-AAAGGCTTCCTGGAAGAGCTGGAATTTAGGGATGGGCATAATTC----AGATACA----AAAGCTGAGGCTGGGGTGTGCCAGGCATCCTGGTCAGAGAACAGGAAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 89374 1759 + 80904711 ccagggtccTGCCTGACCGTAAGGGCTCTACCCGCTCAGAAATCCTTCCCTCCACGTG-GCCAGTCCCCTCTCGGTCTCCCCACCATGCTCTTCTGCGCCCCC--TCTGGACCCCTTTCCTGTCGCAG-CAGAGGCCGCAG-GTGGGGG---GAACTCTAGTTCACTCTCAgcagctagggttgagctctggtcctgcctcggaggctcctgggcaaataccttaatctccttcaacctcagcct-tcccgtctgtaaaatggagacagaaataactaccA---------------TCGGACAAACGGCTTTGCAAATGTA---------------------AAAGGCTGTACGAGCCtataaatatttt-taaaaatttGAATCTAATCCA-CCCCCTCGAGGAACCCATTCAAATCATTTCTCCACTGAAAAGTCTCCTCAACCCTGTGGGCGAAATGCCAACGGGAAGAAGC-AGGGAAGACGCGCCCTCCCTC-CTCTCCCCG---------------------------CCCAGATGCCGTCTGGC--TGCATTTCAGCTCCCACCGATGCCTGCCTTGACCTCCTCAACAGCTTCAGGCACCACGCGAGGTCGGGGCCA------GACCTGA--ATG-----------------CAGC-CCCACGGCTGGGCTTTGGACAAAGCGGGTACTCAGGAAATACCTG----CTGTTTTCCCGAAACTCCTCCCC----AGGACAGGAAACCGCGCTGCGCAAAAACAGCAGGGCCGGCTGG-GGTCAGCAAGGGCTG-GGCACAGAGGGAACGGCGACCCCAGGGCCCCGTCTGTCACCTCCA-CCCCCCCAAAGAGCCGAGGTTTCCCCCAGGATGACAGCAGCCCCAGGACGAGAGCAGGGCGAG----CAGCCCTTCTGACCCACGAGGGAGAAATCTCAGGGGTGCCAGGCGCCT-CTCCCAG-CCTCCCCCAA----AGGGACACTC-GGGGAG--------CGGGTGC-CGGGAGCCTCAGCCTGGGC--AAAGCAGCTGAAC-GGGGAGGAGCTGTAGGC--GGCC-GCTT-CCATGGACACGGATGAGTGGGTCCCGGGGGA--------------------------------------------GCTCTTCTTCCAAACCCACCTCCGGGCC-GGGTGCAGGGCT-GGGGA--AACAAGCTCTTCCTTGGGTTTGGAAACT-CCTGCA----------------GGGCCTGGAAAGGGAGCAAGGGGGCTCCGAGGCCCAGAGAGCCTGACCTCTTAGGGAGGAGCCCACGGGCAGCCGGAAGAGGCTCGGAGCCTGC----CCCGCCCTCCCTCAGGGGCCCTGGAGTCGGGAGATTC-GGGTGCGCGTCTGGCCCTTCGCTGGCTGCCAACCTGACCACGCCTGACAGCCTCAGGACTACCTCAGAGGGCGGGAGAGGCCGTGGCCCCCGGGGAGCCCCCCTTCCTCGGTCCCCCGTCCAGGCTGCCACGGAAAGGCCCCCGAGGACAGCCCCGGGCACG-GGAGCTGAC---GGGGCACAGCCGGGGCTGGGAATCCAGACCACGGGAGTGGAGGAGGCTGTCCTGTGCTTGCTTATTCATTTACCATCGATTTTCATTTACTCCCTCCTTCAGGCCCAGAGACAGACAGGAGGCACCGGATAATGAAGACAAATCCGCAAATCAATAGCAATGTGGTCACCAGCATTGAAATCTTGTGGT-CCCTGCACTCGCTTGAGGAGCTCCAGACAGAACG-------------------------AAAGGCGGACGGACGGGAGATAAGAACGGCTCCCTCCAGAGAGAACG------------Cgaagggcggtggacccctcagg--gac-ggggcaatcagaaagggttccctggaagaggtggaattaaaggatgggtatgattt----atacaca----aacgctgaggctggggcgtgccaggcatcctgggcagagaacaggaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 90205 1742 + 80997621 ccagggtccTGCCTGACCGTAAGGGCTCTACCCGCTCAGAAATCCTTCCCTCCACGTG-GCCAGTCCCCTCTCGGTCTCCCCACCATGCTCTTCTGCGCCCCC--TCTGGACCCCTTTCCTGTCGCAG-CAGAGGCCGCAG-GTGGGGG---GAACTCTAGTTCGCTCTCAGCAGctagggttgagctctggtcctgcctcggaggctcctgggcaaataccttaatctccttcaacctcagcct-tcccgtctgtaaaatggagacagaaataactacca---------------tcggacaaacggctttgcaaatgta---------------------aaaggctgtacgagcctataaatatttt-taAAAATTTGAATCTAATCCA-CCCCCTCGAGGAACCCATTCAAATCATTTCTCCACTGAAAAGTCTCCTCAACCCTGTGGGCGAAATGCCAACGGGAAGAAGC-AGGGAAGACGCGACCTCCCTC-CTCTCCCCG---------------------------CCCAGATGCCGTCTGGC--TGCATTTCAGCTCCCACCGATGCCTGCCTTGACCTCCTCAACAGCTTCAGGCACCACGCGAGGTCGGGGCCA------GACCTGA--ATG-----------------CAGC-CCCACGGCTGGGCTTTGGACAAAGCGGGTACTCAGGAAATACCTG----CTGTTTTCCCGAAACTCCTCCCC----AGGACAGGAAACCGCGCTGCGCAAAGACAGCAGGGCCGGCTGG-GGTCAGCAAGGGCTG-GGCACAGAGGGAACGGCGACCCCAGGGCCCCGTCTGTCACCTCCA-CCCCCCCAAAGAGCCGAGGTTTC-----------------CCCCAGGACGAGAGCAGGGCGAG----CAGCCCTTCTGACCCACGAGGGAGAAATCTCAGGGGTGCCAGGCGCCT-CTCCCAG-CCTCCCCCAA----AGGGACACTC-GGGGAG--------CGGGTGC-CGGGAGCCTCAGCCTGGGC--AAAGCAGCTGAAC-GGGGAGGAGCTGTAGGC--GGCC-GCTT-CCATGGACACGGATGAGTGGGTCCCGGGGGA--------------------------------------------GCTCTTCTTCCAAACCCACCTCCGGGCC-GGGTGCAGGGCT-GGGGA--AACAAGCTCTTCCTTGGGTTTGGAAACT-CCTGCA----------------GGGCCTGGAAAGGGAGCAAGGGGGCTCCGAGGCCCAGAGAGCCTGACCTCTTAGGGAGGAGCCCACGGGCAGCCGGAAGAGGCTCGGAGCCTGC----CCCGCCCTCCCTCAGGGGCCCTGGAGTCGGGAGATTC-GGGTGCGCGTCTGGCCCTTCGCTGGCTGCCAACCTGACCACGCCTGACAGCCTCAGGACTACCTCAGAGGGCGGGAGAGGCCGTGGCCCCCGGGGAGCCCCCCTTCCTCGGTCCCCCGTCCAGGCTGCCACGGAAAGGCCCCCGAGGACAGCCCCGGGCACG-GGAGCTGAC---GGGGCACAGCCGGGGCTGGGAATCCAGACCTCGGGAGTGGAGGAGGCTGTCCTGTGCTTGCTTATTCATTTACCATCGATTTTCATTTACTCCCTCCTTCAGGCCCAGAGACAGACAGGAGGCACCGGATAATGAAGACAAATCCGCAAATCAATAGCAATGTGGTCACCAGCATTGAAATCTTGTGGT-CCCTGCACTCGCTTGAGGAGCTCCAGACAGAACG-------------------------AAAGGCGGACGGACGGGAGATAAGAACGGCTCCCTCCAGAGAGAACG------------Cgaagggcggtggacccctcagg--gat-ggggcagtcagaaagggttccctggaagaggtggaattaaaggatgggtatgattt----atataca----aacgctgaggctggggcgtgccaggcatcctgggcagagaacaggaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 97909 1744 + 74645514 CCAGGGTCCTGCCTGACCGTAAGGGCTCTACCCGCTCAGAAATCCTTCTCTCCACGCG-GCCAGTCCCCTCTCGGTCTCCCCACCATGCTCTTCTGCGCCCCC--TCTGGACCCCTTTCCTGTCGCAG-CAGAGGCCGCAG-GTGGGGG---GAACTCTAGTTCGCTCTCAGCAGCTAGGGTTGAGCTCTGGTCCTGCCTCGGAGGCTCCTGGGCAAATACCTTAATCTCCTTCAACCTCAGTCT-TCCcgtctataaaatggagacagAAATAACTACCA---------------TCGGACAAACGGCTCTGCAAATGTA---------------------AAAGGCTGTATGagcctataaatatttt-taaaaatttgaacctAATCCA-CCCCCTCGAGGAACCCATTCAAATCATTTCTCCACTGAAAAGTCTCCTCAACCCTGTGGGCGAAATGCCAACGGGAAGAAGC-AGGGAAGACGCGACCTCCCTC-CTCTCCCCG---------------------------CCCAGATGCCGTCTGGC--TGCATTTCAGCTCCTACCGATGCTTGCCTTGACTTCCTCAACAGCTTCAGGCACCACACGAGGTCGGGGCCA------GACCTGAATATG-----------------CAGC-CCCACGGCTGGGCTTTGGACAACGCGGGTACTCAGGAAATACCTG----CTGTTTTCCCGAAACTCCTCCCC----AGGACGGGAAACCGCGCTGCGCAAAGACAGCAGGGCCGGCTGG-GGTCAGCAAGGGCTG-GCCACAGAGGGAACGGTGACCCCAGGGCCCCGTCTGTCACCTCCA--CCCCCCAAAGAGCCGAGGTTTC-----------------CCCCAGGACGAGAGCAGGGCGGG----CAGCCCTTCTGAGCCACGAGAGAGGGACCTCAGGGGTGCCAGGcgcct-ctcccag-cctcccccaA----AGGGACACTC-AGGGAG--------TGGGTGC-CGGGAGCCTCAGCCTGGGC--AAAGCAGCTGAAC-GGGGAGGAGCTGTAGGC--GGCCTGCTT-CCATGGACACGGACGAGTGGGTCCCGGGGGA--------------------------------------------GCTCTTCTTCCAAACCCACCTCCGGGCC-GGGTGCAGGGCT-GGGGA--AACAAGCTCTTCCTTGGGTTTGGAAACT-CCTGCA----------------GGGCCTGGAAAGGGAGCAAGGGGGCTCCGAGGCCCAGAGAGCCTGACCTCTTAGGGAGGAGCCCACTGGCAGCCAGAAGAGGCTTGGAGCCTGC----CCCGCCTTCCCTCAGGGGCCCTGGAGTCGGGAGATTC-GGGTGCACATCTGGCCCTTCGCTGGCTGCCAACCTGACCACGCCTGACAGCCTCAGGACTACCTCAGAGGGCGGGAGAGGCCGTGGCACCCGGGGAGCCCCCCTTCCTCGGTCCCCCGTCCAGGCTGCCACGGAAAGGCCCCCAAGGACAGCCCCAGGCACG-GGAGCTGAC---GGGGCACAGCCAGGGCTGGGAATCCAGACCTCAGGAGTGGAGGAGGCTGTCCTGTGCTTGCTTATTCATTTACCATCGATTTTCATTTACTCCCTCCTTCAGGCCCAGAGACAGACAGGAGGCACCGGATAATGAAGACAAATCCGCAAATCAATAGCAATGTGGTCACCAGCATTGAAATCTTGTGGT-CCCTGCACTCGCTTGAGGAGCTCCAGACAGAGCG-------------------------AAAGGCGGACGGACGGAAGATAAGAACGGCTCCCTCCAGAGAAAACG------------CGAAGGGCGGCGGACTCCCCAGG--GAC-GGGGCAGTCAGGAAGGGTTTCCTGGAAGAGGTGGAATTAAAGGATGGGTATGATTT----ATATACA----AACGCTGAGCCTGGGGCGTGCCAGGCATCCTGGGCAGAGAACAGGAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 92804 1745 + 75148670 ccagggtccTGCCTGACCGTAACGGCTCTACCCGCTCAGAAATCCTTCTCTCCACGCA-GCCAGTCCCCTCTCGGTCTCCCCACCATGCTCTTCTGCGCCCCC--TCTGGACCCCTTTCCTGTCGCAG-CAGAGGCCGCAG-GTGGGGG---GAACTCTAGTTCGCTCTCggcagctagggttgagctctggtcctgcctcggaggctcctgggcaaataccttaatctccttcaacctcagtct-tcccgtctgtaaaatggagacagacgtaactacca---------------tcggacaaacggctttgcaaatgta---------------------aaaggctgtacgagcctataaatatttt-tTAAAATTTGAATCTAATCCA-CCCCCTCGAGGAACCCATTCAAATCATTTCTCCACTGAAAAGTCTCCTCAACCCTGTGGGCGAAATGCCAACGCGAAGAAGC-AGGGAAGACGCGACCTCCCTC-CTCTCCCCG---------------------------CCCAGATGCCGTCTGGC--TGCATTTCAGCTCCTACCGATGCCTGCCTTGACTTCCTCAACAGCTTCAGGCACCACTCGAGGTCGGGGCCA------GACCTGA--ATG-----------------CAGC-CCCACGGCTGGGCTGTGGACAAAGCAGGTACTCAGGAAATACCTG----CTGTTTTCCCGAAACTCCTCCCC----AGGACAGGAAACCGTGCTGTGCAAAGACAGCAGGGCCGGCTGG-GGTCAGCAAGGGCTG-GCCACAGAGGAAAAGGCGACCCCAGGGCCCCGTCTGTCACCTCCA--CCCCCCAAAGAGCTGAGGTTTC-----------------CCCCAGGGCGAGAGCAGGGCGAG----CAGCCCTTCTGAGCCATGAGGGAGGGATCTCAGGGGCGCCAGGCGCCT-CTCCCAG-CCTCCCCCAA----AGGGACACTC-AGGGAG--------CGGGTGC-CGGTCGCCTCAGCCTGGGC--AAAGCAGCTGAAC-GGGGAGGAGCTGTAGGC--GGCT-GCTT-CCATGGACACGGATGAATGCGTCCTGGGGGA----------------------------------------GCCTGCTCTTCTTCCAAACCCACCTCCGGGCC-GGGTGCAGGACT-GGGGA--AACAAGCTCTTCCTTTGGTTTGGAAACT-CCTGCA----------------GGGCCTGGAAAGGGAGAAAGGGGGCTCCGAGGCCCAGAGAGCCTGACTTCTTAGGGAGGAGCCCACTGGCAACCAGAAGAGACTCGGAGCCTGC----CCCACCCTCCCTCAGGGACCCTGGAGTCGGGAGATTC-GGGTGCGCGTCTGGCCCTTCGCTGGCTGCCAACCTGACCACCCCTGACAGCCTCAGGACCACCTCAGAGGGCGGGAGAGGGCGTGGCACCTGGGGAGCCCCCCTTCCTC-GTCCCCCGTCCAGGCTGCCACGGAAAGGCCCCCAAGGACAGCCCCGGGCACG-GGAGCTGAC---GGGGCACAGCCAGGGCTGGGAATCCAGACCTCGGGAGTGGGGGAGGCTGTCCTGTGCCTGCTTATTCATTTACCATTGATTTTCATTTACTCCCTCCTTCAGGCCCAGAGACAGACAGGAGGCACCGGAGAATGAAGACAAATCCGCAAATCAATAGCGATGTGGTCACCAGCATTGAAATCTTGTGGT-CCCTGCACTCGCTTGAGGAGCTCCAGACAGAACG-------------------------AAAGGTGGACGGACGGAAGATAAGAACGGCTCCCTCCAGAGAGAACG------------Cgaagggcggcggactcttcagg--gacaggggcagtcagaaagggcttcctggaagaggtggaatttaaggatgggtataattt----gtataca----aacactgaggctggggcgtgccaggcatcctgggcagagaacaggaaa i chlSab2.chr16 I 126 C 0 s calJac3.chrUn_GL286409 903934 1747 - 1291538 CCCGGGTCCTGTCTGACCCTAATGGCTCTGCCCCCTCAGAAATCCTCCCCTCCAGGCA-GCCATTCCCCTCTTGGTCTCCCCACCCTGCTTTTCTGTGCCCTC--TCTGGACCCGCTTCCTGTCGCAGCCagaggccatggtgcgggga---aagctccagctcactcttagccactagagttgagctctggtcctgccttagatgctcctgggcaaataccttaatctctttcaacctcagtct-tcacatctgtaaaatggagatgaaaatgactacca-------------agtaggacacatggctttgggaattta---------------------aAAGGCTACACAAGCCTACATGTATTTT-CACAAATTAGAATCTAATCCACCCCCCTCCAGGAACCCATTCAAATCCTGCCTCTACTGAAAAGTCTCCTCAGCCCC---------------AGGGAAAGGAGC-CCGGGAGAAAGGACCTCCCTC-CTGTCCC-----------------------------ACCGGACACTGTCTGGC-TTGCATTTCTTTTCCTACCAATGCCTGCCTTGA---CCTCAATGGATTCAGGTACCACCTGAGGGCACAGCCA------TCCCTGA--ATGCAC-CATCTCTTC-CCTCAGC-CTGACCGCCAGGCTTTTGGCAAAGCGGTTACTCAGGAAATGCTTGCTGACTGTTTTCCTGAAAACCCT-ACC----AGGACCAGAAACCGTACTGTACAAAG--AGCAGGGCCGGCCAG-G----GCAAGGGGTG-GCCACAGAGATAAAGGAGCCCCCAAAGCCCCATCTGCCACCTCCATCTCCCCCACAGAGCTGAGGTTTC-----------------CACCAGGATGAGCGCTGGGCAAGCAGTCAGCCTTTCTGGGCCATGATGGAGGAATCTCAGGGGTGCCAGGTGCCT-CTCCCAGCCCTAATCCCG----ATGGACACTCTAGGG-----------GGATAC-TGGTGGCCTCAGCCTGGGCAAAAAACAGATAAAT-GGGGAAGAGCTGTAGGA--GGCT-G--------------------GTGGGCTGTGGGGGAGAG--------------------TGCTCTG-TCAC--ACAGTCTGCTCTTCTTCCAAACCCACCTGCAGGCCAGGGTGCGGGGCTGGGGGA--AACAAGCTCTCTCTTTGGTTT-GAAACTCCCTGCAGGGCCCTGGAGAATCAGGGTCTGGATAGGGAG-AAGGGGGCTCCAAGGCCTGTAGAGCCTGTCCTCTTAGGGAGGGGCCCACTGGCAGCCAGAAGAAGCT--GAGCCCAG----CCCTCCCTCACTCAGGGACCCTGGAGCCAGAAGATGT-GGGCACGCTTCCGGCCCTTTGCTGGCCAGCAACCTGACCACCCCTGACAGCTCCAGGACTACCCTGGAGGGCTAGTGAGGCCATGGTACCTGGGGAGCCTTCCT--------------TCTAGGCTGCCA-GGAAAGGCTCCTGAGTGCAGACCCAGGCATG-AGAGCCGAC----AGGCACAGGCAGGGCTGGGAATCCAGGTTTGGGGAGTGGAGGAGGCCGTCCTGCACCTGCTTATTCATTTTCCATCAATTTTCGTTTACTCCCTCCTTCAGGTCCAGAG----ACAGGAGGCACCAGGCAATGAAGACAAATCCACAAATCAATAGAGACATGGTCACCAGCATTGGAATCTTGTGGT-CCCTGCCCTTGCTTGAGGAGCTCCAAATAG------------------------------AAGGTGGATGTATAGA-----AGAACAGCTCCCTGCAGAGAGAACGTGATAGGCTG-ATGAAGGGCAGGGG-TTGTTCAGG--GAGAGGGCCAgtcagagagggcttcctggaagaggtgaaatccaaggatgtacataattt----agacagatatgaaagctg-ggctggggcttgctgggcatcctggacagagaacaagaaa i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75840887 1482 + 122082543 CCACGCTCCTGTCTCACTC-AAAGACTCTAGACTCTCAGGAAAACT---CTCCAGGCA-GCTGATTCATCC-----------------CTCTCATGGGCC-------------------CTGAATCAG--GGAGGCTGTTTCACGGATG------------------CCCactgccttgacttgaaccctggttcta-cttggatgcatctgggcaaataccata----ccctaggcctcaatttgtctcatctatgaaatggACAGGAAGGAGGGGAGTG-------------AGACAGAAAAAC-GCCCAGCAAGATGAGATCCAACAGAGAAAAAGACTAAACACTACACAAGCTGCTAAG-AGTTT-TAAAAATCAGAGTTTAATGCA-ATGC--CCAGGAGTCTCTTCAATGTGTTTCTTCTGCCCAGAGTCCT--CTGCCCC---------------------AGGAAA-AGAGGGAACTCACCCGGCCAC-CTCCACTTC---------------------------C------------------TGTTTTT---------------CCTGCTTTGACCTTACC-----CTACCTGGAGCAACCCAGGGGACGGCCACCTTGTGACCCAA--ATC--CATCTCCCTTC-CCTGAGC-----CTGCCTGGCCCTAGATAAAGC--------------CACTTGGTAACTATGTT-------------------------------CTGAGCTGT---------GCAGGGCAG--TAG-GGTCTGCAAGAGGTA----------------------------------------------------------AGGTAGGTAGTT-----------------CACCAGGCCA---GCAGGACAGG--------------------TGATGGCAGAGCCCCA-----ACCAGGCACCT-CTCATCT-CTTTTCCTGG----AAGGACACTT-----------------------AGATAACCTCAGCCTGGGC--A-------------GGGACTGGGGTGGAGGATGGGAA-GTTC-CCATGGAATGGGATGAATGGCCCCTGAGGGA---------------------------------------AGCAAGCTGCTCTT--------------------GGGAGTGGGGGA-GGGGAGCAGTGGCCTCTTTCTCTGGTTTG-------TCCCCA----------------GGGTTCCATCCAGGAAAGAGGATGGCCCAAGGCTAGGGGAACCTGTCCTCCCAGGAATGGGCCCATTGGCAGCCAGAAGAGGCTCAGTGCCTGC----CTGTCCTTCCCT---GGGACCAGGTGACAGGAGTCAT--GGTACGCTTCCA------------------ACCTGTCCTAGTGTG-CAGCC---------------AGGGACAGAGA-GCCATAGGAGCTTGGTA-CGTTCCTTCCCT-GACACCCTTCAAGGCCGCCCTTAGAGG--CTCTGAGAATGACCCTGGGCAGGAAGAGGCAACAAAGAGGCACAGCACTGACTGATAAGTCAGATGTGGGGCTAGGAGGGGTC---CCAGTGCTGGCTTATTCA-TGAGCATCGATTTTAATTTTCTCTCTCCTTTGGGCTCACAGACAGATAGGAGGCACCAGCTAATGAAGACAAATCCACAGATCAATAGAGATGTGGTTGCTGGTGTGAAAACCCTCTGGTCCCCTGACCTCAAATGAGGAGCTCTGGATaggaggaggaagaggaggaggaggaggaggaagaggagga-ggGTGGATGTTAAGAACTGCTCCC-CCAGAGAGAACAGGATATACAGAATGGGGTAGAGTAGAACAGTCGGG--GAGAGA-----TCAGAGAGGGCTTCCTGGAAAAGGAGGGACTTACAAATAAACACCATTTAAGCAGGTACA----AAAGTAG-TCCTGGGGTATGCCAGGCATTCCAG--AAAGTCTAGGGCA i mm10.chr11 I 5 C 0 s canFam3.chr9 15663567 1526 - 61074082 CCGCAGTCTGGCCTTGCCCTAAGGGCTCTGCTCCCTCAGGAGTTCCCCTCTCCAGGCATGCCAGCTCCTCCTCAGTCTCCGCAACATGCCCTTCCCAGGCTTCTGTCTGGGCC--TTTCCTTTCAGAGGTAGGTGCTGCGATGTGAGTGCGAGGCTCCCTGCTCCCTCCGCACATCGTGGGTGGA------GTCCAGCCTCTAACATTcctgagcaaagaccttcatctctctgagcctcaatct-tctcatgtggaaaacagagacaataGCCACCCCAAGGAAATATGATCGAGCAGGACAAAAAGCATTACAAGTTCA---------------------AAAAACTATGCAAGACTGTATATATTTT-TAAAAATTCGATTCCAGTTCA---TCCTCCAGGAACCTATTTAAATCGTGCCTCTACTGAAAAGTGTCTCTGGCCTG-----------------GGGAAGAAGAGATGGAAGACAGGCCTTTCCTCgctctccccatgactgctggggcagctcttctggccccccagacactgcctggcattgcatttc-tttaccatggatgcctgccttcatttccccaactgtaccaggaaccacttgagggcagggccg------catccta--atctgcatctggcttcttctgggctcccagcactgagccttcagtcaagcaggcactcagtaaatacctg---ACTGCTTCCTGGAAGAACCTCCCAGGAGAGGACAGGGCACT-CACTGTACAGAGACAGCAGGACCGGACGGCGGTTGGCACGG--TT-GGCACAGTGGTGGTGA-------------------GCCAGCTCCA--TCTCCAGAAGAGGTGGACTCCC-----------------CATCAGG-----------------------------------------------------------CAGGCGCCTCCTCACAG-CCTCCTCCTGCTTCAAGGACACTC-AAGTGGGACAAGCCAGGCTGC-TGGTGG----AGCCAGGGA--CAGACTAATGG---GGGGAGGGGCTGTCAGA--GGCT-GCTTGTCACAGACATGGGGTGATGGGCCCTGGGCGGGTGGTGGTAGGTGGGAGGAATGATGCACTGCTCACAGAGAGCCTGCTCTTCTTTCAAATCCAAGGCCAAGCC--------------AGAGG--AACAGGTTCTTCCTTTGTTTGGCAAACTCCCTCCA----------------GGGCCCGGACAAGGAGAAAGGTGGCCTCAAGGCCAGGGGAG---------------------------------------------------GC----CATTCCTTCTCT-----------GTGAAGGAAGAGGT-GGAGGTA-------------------------------------------TCACAGGACCACCTCAAAGCGTGGGTGAGCCTGTGGCACCAAGGGAGGCCCTTTGCCTTGGTCTCCCTCCTGGGCTGCCA-----------CCAAGGACAC-------CAGT-AGGGATAAC--------ACAGACCAGGCTGGGAACTGACAGCTGGGGGATGGAGGG---TTTCCTGGGATTGTTTGTGCGTGCCCCATTGATTTTAATTAACTACCTCCTTTGGGCTCGCAGACAGACAGGAGGCACTGGGTAATGAAGACGAATC----AATCAATAGTGATGTGGTCACCAGCACTGAAATCCTGTAGT--CCTGGCTTTGCTGGAGGAGCTCCAGATAGAATG-------------------------AGAGGTGGGTGGATAGAAGACAAGAACAGCTTCCTCCAGAGAGAACC----------------------GGATACTCTCAAG--GGGAGG------CAGAGAGTGTT--CAGGGAGA----------AGGGAA-------------------------------------------------------------------------- i canFam3.chr9 C 0 C 0 a score=329648.000000 s hg38.chr17_GL383563v3_alt 181592 120 + 375691 agcaaaggccaggcagTGG-ACTCCTCTG--GGGCCAGGACCATCCTGCTGGCTCAGGAGAAAGGCCCCAGGCTCAGGCATACAGGGGACATGGCCTGGTCTGGGTTGGGTGTGGTCTGCACT s panTro4.chr17 167632 120 + 82630442 AGCAAAGGCCAGGCAGTGG-ACTCCTCTG--GGGCCAGGACCATCCTGCTGGCTCAGGAGAAAGGCCCCAGGCTCAGGCATACAGGGGACATGGCCTGGTCTGGGTTGGGTGTGGTCTGCACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 65021 100 + 73212453 agcaaaggccaggcagTGG-ACTCCT----------------------CTGGCTCAGGAGAAAGGCCCCAGGCTCTGGCATGCAGGGGACATGGCCTGGTCTGGGTTGCGTGTGGTCTGTACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 129636 119 - 81552678 AGCAAAGGCCAGGCAGTGG-ACTCCTCTG--GGGCCAGGACCGTCCTGCTGGCTCAGGAGAAAGGCTCCAGGCTCAGGCATGCA-GGGACGTGGCCTGGTCTGGGTTGGGTGTGGTCTGTACT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 91133 119 + 80904711 agcaaaggccagg-agTGG-ACTCCTCTG--GGGCCAGGACAGTCCCGCTGGCTCAGGAGAGAGGCTCCAGGCTCAGGCATACAGGGGACATGGCCCGGTCTGGGTCGGGTGTGGTCTGTGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 91947 119 + 80997621 agcaaaggccagg-agTGG-ACTCCTCTG--GGGCCAGGACAGTCCCGCTGGCTCAGGAGAAAGGCTCCAGGCTCAGGCATACAGGGGACATGGCCCGGTCTGGGTCGGGTGTGGTCTGTGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 99653 119 + 74645514 AGCAGAGGCCAGG-AGTGG-ACTCCTCTG--GGGCCAGGACAGTCCCGCTGGCTCAGGAGAAAGGCTCCAGGCTCAGGCATACAGGGGACATGGCCCGGTCTGGGTTGGGTGTGGTCTGTGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 94549 119 + 75148670 agcaaaggccagg-agTGG-GCTCCTCTG--GGGCCAGGACAGTCCCGCTGGCTCAGGAGAAAGGCTCCAGGCTCAGGCATACAGGGGACATGGCCCGGTCTGGGTTGGGTGTGGTCTGTGCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 905681 109 - 1291538 aacaaaggccaggcagTTG-ACTCCTCTG--GGGCCAGGGCAGTCGTGCTGGCTCAGGAGAAAGGCTCCAGGCACAGGCATACAAG------CGCCTGGTCTGG-----GTGTGGTCTGTACT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75842369 99 + 122082543 AGCTGAAGCTAAGCAATGATCCTCCTTTGGAGGATCAGGA----------AACTCTGGATGAAGGTCCTGTG-------------GGGAGAAGGGGTGAACTGG-TTGGGTATGTTCTATATT i mm10.chr11 C 0 C 0 e canFam3.chr9 15665093 0 - 61074082 C a score=239565.000000 s hg38.chr17_GL383563v3_alt 181712 116 + 375691 GTCAGG-GACAGATGATGGCTTTTGGTTTATGAAAGA-ATGAAACACGGCAAGCCTATGCCCCCTGCCCACGACTTCACTGGGGTGCAGGACGTGCTTTCGGGTGCATCCTGACTCCA s panTro4.chr17 167752 116 + 82630442 GTCAGG-GACAGATGATGGCTTTTGGTTTATGAAAGA-ATGAAACACGGCAAGCCTATGCCCCCTGCCCACGACTTCGCTGGGGTGCAGGACGTGCTTTTGGGTGCATCCTGACTCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 65121 112 + 73212453 GTCAGG-GACAGATGATGGCTTTTGGTTT----AAGA-ATGAAACACAGCAAGCCCATGCCCCCTGCCCATGACTTCGCTGGGGTGCAGGATGTGCTTTTGGGTGCATCCTGACTCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 129755 116 - 81552678 GTCAGG-GACAGATGATGGCTTTTGCTTTATGAAAGA-ATGAAACACAGCAAGCCCATGGCCCCTGCCCACGACTTCGCTGGGGTGCGGGATGTGCTTTTGGGAGCATCCTGACTCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 91252 115 + 80904711 GTCAGG-GAC-GATGACGGCTTTTGGTTTGTGACAGAGATGAAGCACAGCAAGTCCGTGCCTCCTGCCCACAACTGTGCC-GGGTGCAGGGCGTGCTTCTGTGTGTGTCCTGACTCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 92066 115 + 80997621 GTCAGG-GAC-GATGACGGCTTTTGGTTTGTGACAGAGATGAAGCACAGCAAGTCCGTGCCTCCTGCCCACAACTGTGCC-GGGTGCAGGGCATGCTTCTGTGTGTGTCCTGACTCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 99772 115 + 74645514 GTCAGG-GAT-GATGACGGCTTTTGGTTTATCACAGAGATGAAGCACAGCAAGTCCGTGCCTCCTGCCCACAACTGTGCC-GGGTGCAGGGCGTGCTTCTGTGTGTGTCCTGACTCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 94668 115 + 75148670 GCCAGG-GAC-GATGACGGCTTTTGGTTTGTGACGGAGACGAAGCACAGCAAGTCCGTGCCTCCTGCCCACAGCTGTGCC-GGGAGCAGGGCGTGCTTCTGTGTGCGTCCTGACTCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 905790 84 - 1291538 GTCA-G-GACAGATGAGGG-------------------ACAAAATGCGGCAAG-----------TGCTCGCGACTTTGCT-GGGTGCAGGATGTGCTCTTGGGTGC-TCCTGACTCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75842468 112 + 122082543 GTTAGGCCGCACATGGTGGC-TCTGGCTTCTGGCAG--ACCCAAAAGAGGGAGCCTATCTGTCCTGCACTC--CTTGGCTGGCAGGTGGCATGAGCCTTTGTTTCT-TCCGGACTTGA i mm10.chr11 C 0 I 151 s canFam3.chr9 15665093 69 - 61074082 -------------------------------------------GTCAGGGAAGTGCATGTTTCCTGC------CTTTGCTGGGATGCAGAATGTGCCTTGGTTCTGTCCTTGACCACA i canFam3.chr9 C 0 C 0 a score=143148.000000 s hg38.chr17_GL383563v3_alt 181828 93 + 375691 GCCTTTCTCTCCGTGTGTCTCTGGGGCCTTCACTGTTCTTCCA--CCTCATCTCTTTGTGCCTCCCttgt------ttgttgttgttgt----tgTTGTtgtttt s panTro4.chr17 167868 98 + 82630442 GACTTTCTCTCCGTGTGTCTCT-GGGCCTTCATTGTTCTTTCA--CCTCATCTCTTTGTGCCTCCCTTGTTTTttgtttttgttgttgt----tgttgttgtttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 65233 101 + 73212453 GCCTTTCTCTCCATGTGTCTCT-GGGCCTTCATTGTTCTTTCA--CCTCATCTCTTTGTGCCTCCCTTGTTTttttgttttgtt-ttgttttgttttgttttgtt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 129871 80 - 81552678 CCCTCTCTCTCCGGGTGTCTCT-GGGCCTTCATTGCTCTTTCA--CCTCATCTCTTTGTGCCTCCCT------------------TTTT----ttttcctttttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 91367 78 + 80904711 GCCTTCCTCTGCGTGTGTCC---GGGCCTTCGCTGTTCTTTCA--CCTCATCTCTTTCTGCCTCTCTTGC------------------T----tttttttttttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 92181 75 + 80997621 GCCTTTCTCCGCGTGTGTCT---GGGCCTTCGCTGTTCTTTCA--CCTCATCTCTTTCTGCCTCTCTTGC-------------------------tttttttttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 99887 78 + 74645514 GCCTTTCTCTGCGTGTGTCT---GGGCCTTCGCTGTTCTTTCA--CCTCATCTCTTTTTgcctctcttgc------------------t----tttttttttttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 94783 78 + 75148670 GCCTTTCTCTGCGTGTGTCT---GGGCCTTCGTTGTTCTTTCA--CCTCATCTCTTTTTGCCTCTCTTCC------------------t----tttttttttttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 905874 75 - 1291538 GTCT---TCTATGTGTATCTCT-GGGCCTTCATGGTTCTTTCA--CTTCATCTCTTTATGCCTCTCTTGC------------------T------GAGtttttaa i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15665162 52 - 61074082 -GCTCTCTCTCTGTCTCCTT---CTGCCTCTGTGGGTCTTTGGGCCTTCATCTTTT------------------------------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75842580 151 + 122082543 I a score=2217807.000000 s hg38.chr17_GL383563v3_alt 181921 793 + 375691 t--catagagacagggtctcgctatgttgtccaggttggtctcgaactcctgggctcgagggatccagccgccttggcctcccgaagtgctgggatcacaggcgtgagccatggcacccggcctctt-----gctgatgttTCCAAACTCTCC-CTCTGCCTCTGAATTTCTTATCTTCATTT--CCC--TCCGTATCT-GTGTCTTTGTGTGTTCAGAGCCTTCTAGAGTGTTTCTTGGTTCCTCCTTCTG-TCTATGCCAGCTCCTCTCACTCTCCAGGATCTGCCTCTCTGCATCTCTGGGCCTCCATCTCTG--------TCTCTCCCTCCCCAGGTCTCTCTG----------------TCACATATCCTCAGGGCACTGCTTTCTTGGCCTCTGGGTTTGTGCCTCAGGTTCCCCCACTTGGGCTGGAATCTCA---CTCCCTCAGGCCCATGGGGTCTGTGGTCAGAGCTTAGGTT-TGGGGTGGGCTGCCTGCTTTGCCTGGAACTCCTGTCTATCCCAGGAGCAACCAAGGTAGG-GAGGCCTGCCTGCCCCTTCCTGTGTGCAGGCCAGGGCCCTGCTG--CCCACTTCT----------------GGACCACCAGCGGGAAATCAGCTGAGCCCCATGTGCAAGGCCAGGCCTCACCTGTGACGGACAGTTGGCCCTGGGAGAGAGCTGAGAGCTGACAGGAGCCAGG-----GCGGTTATCTCCCAGGCCTTTGCTGGAATCAGATGGGGCA-GAGAGGCCCAGATTTATTCACTTCACT--TAGTCCCC----------------------------------------------------GAGACAGGTGAGC------------GGCTGGAGATGG-ACGTGCTTCACTGCACGAG-GCAGAGGC----TAGCATGG s panTro4.chr17 167966 793 + 82630442 t--tatagagacagggtctcgctatgttgtccatgttggtctcgaactcctgggctcgagggatccacccgccttggcctcccgaagtgctgggatcacaggcgtgagccatggcacccggccTCTT-----GCTGATGTTTCCAAACTCTCC-CTCTGCCTCTGAATTTCTTATCTTCATTT--CCC--TCCGTATCT-GTGTCTTTGTGTGTTCAGAGCCTTCTAGAGTGTTTCTTGGTTCCTCCTTCTG-TCTATGCCAGCTCCTCTCACTCTCCAGGATCTGCCTCTCTGCATCTCTGGGCCTCCATCTCTG--------TCTCTCCCTCCCCAGGTCTCTCTG----------------TCACATATCCTCAGGGCACTGCTTTCTTGGCCTCTGGGTTTGTGCCTCAGTTTCCCCCACTTGGGTTGGAATCTCA---CTCCCTCAGGCCCATGGGGTCTGTGGTCAGAGCTTAGGTT-TGGGGTGGGCTGCCTGCTTTGCCTGGAACTCCTGTCTATCCCAGGAGCAACCAAGGTAGG-GAGGCCTGCCTGCCCCTTCCTGTGTGCAGGCCAGGGCCCTGCTG--CCCACTTCT----------------GGACCACCAGCGGGAAATCAGCTGAGCCCCATGTGCAAGGCCAGGCCTCACCTGTGACGGACAGGTGGCCCTGGGAGAGAGCTGAGAGCTGACAGGAGCCAGG-----GCGGTTATCTCCCAGACCTTCACTGGAATCAGATGGGGCA-GAGAGGCCCAGATTTATTCACTTCACT--TAGTCCCC----------------------------------------------------GAGACAGGTGAGC------------GGCTGGAGATGG-ACGTGCTTCACTGCACAAG-GCAGAGGC----TAGCATGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 65334 793 + 73212453 t--tatggagacagggtctcactatgttgtccaggctggtctcgaactcctgggttcaagtgatccacccgccttggcctcccaaagtgctgggatcacaggcgtgaaccatggcacccggccTCTT-----GATGATGTTTCTAAAATCTCC-CTCTGCCTTTGAATTTCTTATCTTCATTT--CCC--TCCGTGTCT-GTGTCTTTGTGTGTTCAGAGCCTTCTCGAGTGTTTCTTGGTTCCTCCTTCTG-TCTATGCCAGCTCCTCTCACTCTCCAGGATCTGCCTCTCTGCATCTCTAGGCCTCCATCTCTG--------TCTCTCCCTCCCCAGGTCTCTCTG----------------TCACATATCCTCAGGGCCCTGCTTTCTTGGCCTCTGGGTTTGTGCCTCAGTTTCCCCCACCTGGGCTGGAATCTCA---CTCCCTCAGGCCCACGGGGTCTGTGGTCAGAGCTTAGGTT-TGGGGTGGGCTGCCTGCTTTGCCTGGATCTCCTGTCTATCCCAGGGGCAACCAAGGTAGG-GAGGCCTGCCTGCCCCTTCCTGTGTGCAGGCCAGGGCCCTGCTG--CCCGCTTCT----------------GGACCACCAGCGGGAAATCAGCTCAGCCCCATGTACAAGGCCAGGCCTCACCTGTGATGGACAGGTGGCCCTGGGAAAGAGCTGAGAGCTGAGTGGAGCCAGG-----GCGGTTATCTCCCAGGCCTTTGCTGGAATCAGATGGGGCA-GAGAGGCCCAGATTTATTCACTTCACT--TAGTCCCC----------------------------------------------------GAGACAGGTGAGC------------GGCTGGAGATGG-ATGTGCTTCACTGCACGAG-GCAGAGGC----TAGCATGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 129951 786 - 81552678 t--tatagagacagggtctcgctatgttgtccaggctggtctcgaactcctgggctcgagtgatccacctgcctcagcctcccaaagtgctgggatcacaggcgtgagccacggcacccggccTCTT-----GCAGCTGTTTCTAAAATCTCC-CTCTGCCTCTGAATTTCTTATCTTCATTT--CCC--TCCGTGTCT-GTGTCTTTGTGTGTTCAGAGCCTTCT----TGTTTCTTGGTTCGTCCTTCTG-TCTATGCCAGCTCCTCTCAGTCTCCAGGATCTGCCTCTCTGCATCTCTGGGCCTCCATCTCTG--------TCTCTCCCTCCCCAGGTCTCTCTG----------------TCACATATCCTCAGGGCCCTGCTTTCTTGGCCTCTGGGTTTGTGCCTCAGTTTTCCCCACCT-GGCTGGAATCTCA---CTCCCTCAGGTCCATGGGGTCTGTGATCAGAGCTTAGGTA-TGGGGTGGGCTGCCTGCTTTGCCTGGATCTCCTGTCTATCCCAGGGGCAACCAAGGTAGG-GAGGCCTGTCTGCCCCTTCCTGTGTGCAGGGC--GGCCCTGCTG--CCCGCTTCT----------------GGACCACCAGCAGGAAATCAGCTCAGCCCCATGTGCAAGGCCAGGCTTCACCTGTGATGGACAGGTGGCCCTGGGAGAGAGCTGAGAGCTGAGGGGAGCCACG-----GCAGTTATATCCCAGGCCTTCACTGGCATCAGATGGGGCA-GAGAGGCCCAGATTTATTCACTTCACT--TAGTCTCT----------------------------------------------------GAGACAGGTGAGT------------GGCTGGAGACGT-ATGTGCTTCACTGCACGAG-GCAGAGCC----TAGCATGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 91445 786 + 80904711 t--aatagatacagggtcttgctatgttgtcaaggctggtctcgaactcctgggctcaagtgatccacctgcctcggcctcccaaagtgctgggatcacaggcgtgagccatagcacccggccTCTT-----GCTGATGTTTCTAAAATCTCC-CTCTGCCTCTGAATTTCTTGTCTTCATTT--CCC--TCCGTGTCT-GCGTCTTTGTGCGTTCGGAGCCTTCCTGAGTGTCTCTTGGCTCCTCCTTCTG-TCTATGCCAGCTCCTCTCACTCTCCAGGATCTGCCTCTCTGCATCCCTGCGTCTCCATCTCCG--------TCTTTCCCTCCCCAGG----TCTG----------------TCACATAACCTCAGGGCCCTGCTCTCTTGGCCTCTGGGTTTGTGCCTCAGTTTCCCCCACCTGGACTTGAATCTCAGTCCCTCCTCAGGCCCACGGGGTCTGTGGTCAGAGCTTAGGTA-CGGGGTGGGCTGCCTGCTTTGCCTGGACCTCCTGTCTACCCCAGGGGCAAGCCAGGCAGG-GAGGCCCGCCCGCTGCTTCCTGTGTGCAGGCCAGGGCCCTGCTG------CTTCC----------------GGA-CACCAGCGAGGAATCAGCTCAGCTCCACGTGCAGGCCCAGGCTTCACCTGTGACGGACAGGAGGTCATGGGAGAGGGCTGCGAGCTGAGCGGAGCCA-G-----GCGGTTATCTCCTAGGCCTTCGCTAGAGTCAGATGGGGCA-GGGAGGCCCCCATTTATTCACTTTACT--TAGTCCCC----------------------------------------------------GAGACAGGTGAGC------------GGCTGGAGATGG-ACGTGCTTCACTGCACAAG-GCAGGGCC----TAGCATGG i rheMac3.chr16 C 0 I 121 s macFas5.chr16 92256 786 + 80997621 t--aatagatacagggtcttgctatgttgtcaaggctggtctcgaactcctgggctcaagtgatccacctgcctcggcctcccaaagtgctgggatcacaggcgtgagccatagcacccggccTCTT-----GCTGATGTTTCTAAAATCTCC-CTCTGCCTCTGAATTTCTTGTCTTCATTT--CCC--TCCGTGTCT-GCGTCTTTGTGCGTTCGGAGCCTTCCTGAGTGTCTCTTGGCTCCTCCTTCTG-TCTATGCCAGCTCCTCTCACTCTCCAGGATCTGCCTCTCTGCATCCCTGCGTCTCCATCTCCG--------TCTTTCCCTCCCCAGG----TCTG----------------TCACATAACCTCAGGGCCCTGCTCTCTTGGCCTCTGGGTTTGTGCCTCAGTTTCCCCCACCTGGACTTGAATCTCAGTCCCTCCTCAGGCCCACGGGGTCTGTGGTCAGAGCTTAGGTA-CGGGGTGGGCTGCCTGCTTTGCCTGGACCTCCTGTCTACCCCAGGGGCAAGCCAGGCAGG-GAGGCCCGCCCGCTGCTTCCTGTGTGCAGGCCAGGGCCCTGCTG------CTTCC----------------GGA-CACCAGCGAGGAATCAGCTCAGCTCCACGTGCAGGCCCAGGCTTCACCTGTGACGGACAGGAGGTCATGGGAGAGGGCTGCGAGCTGAGCGGAGCCA-G-----GCGGTTATCTCCTAGGCCTTCGCTAGAGTCAGATGGGGCA-GGGAGGCCCCCATTTACTCACTTTACT--TAGTCCCC----------------------------------------------------GAGACAGGTGAGC------------GGCTGGAGACGG-ACGTGCTTCACTGCACAAG-GCAGGGCC----TAGCATGG i macFas5.chr16 C 0 I 80 s papAnu2.chr16 99965 769 + 74645514 t-aaatagatacagggtcttgctatgttgtcaaggctggtctcgaactcccgggctcaagtgatccacctgcctcggcctcccaaagtgctgggatcacaggcgtgagccatagcacccgGCCTCTT-----GCTGATGTTTCtaaaatctcc-ctctgcctctgaaTTTCTTGTCTCCATTT--CCC--TCCGTGTCT-GCGTCTTTGTGCGTTCGGAGCCTTCCTGAGTGTCTCTTGGTTCCTCCTTCTG-TCTATGCCAGCTCCTCTCACTCTCCAGGATCTGCCTCTCTGCATCGCTGCGTCTCCATCTCCG--------TCTTTCCCTCCCCAGG----TCTG----------------TCACATATCCTCAGGGCCCTGCTCTCTTGGCCTCTGggtttgtgcctcagtttcccccaccTGGACTTGAATCTCA-------------------GGGTCTGTGGTCAGAGCTTAGGTA-CGGGGTGGGCTGCCTGCTTTGCCTGGATCTCCTGTCTACCCCAGGGGCAAGCCAGGCAGG-GAGGCCCGCCCGCTGCTTCCCGTGTGCAGGCCAGGGCCCTGCTG------CTTCC----------------GGA-CACCAGCAAGGAATCAGCTCAGCTCCACGTGCAGGCCCAGGCTTCACCTGTGACGGACAGGAGGCCGTGGGAGAGGGCTGCGAGCTGAGCGGAGCCAGG-----GCGGTTATCTCCTAGGCCTTCGCTACAGTCAGATGGGGCA-GGGAGGCCCCGATTTATTCACTTCACT--TAGTCCCC----------------------------------------------------GAGACAGGTGAGC------------GGCTGGAGACGG-ACGTGCTTCACTGCACAAG-GCAGGGCC----TCGCATGG i papAnu2.chr16 C 0 I 80 s chlSab2.chr16 94861 780 + 75148670 ttaaatagatacagggtcttgctatgttgtcaaggctggtctcgaactcctgagctcaagtgatccacctgccttggcctcccaaagcgctgggatcacaggcgtgagccacggcacccagccTCTT-----GCTGATGTTTCTAAAATCTCC-CTCTGCCTCTGAATTTCTTGTCTTCATTT--CCC--TCCGTGTCT-GCGTCTTTGTGCGTTCAGAGCCTTCCTGGGTGTCTCTTGGTTCCTCCTTCTG-TCTATGCCAACTCCTCTCACTCTCCAGGATCTGCCT----------CTGCGTCTCCATCTCCG--------GCTTTCCCTCCCCAGG----TCTG----------------TCACATATCCTCAGGGCCCTGCTCTCTTGGCCTCTGGGTTTGTGCCTCAGTTTCCCCCACCTGGACTTGAATCTCAGTCCCTCCTCAGGCCCACGGGGTCTGTGGTCAGAGCTTAGGTA-CGGGGTGGGCTGCCTGCTTTGCCTCGATCTCCTGTCTACCCCAGGGGCAAGCAAGGCAGG-GAGGCCCGCCCGCTCCTTCCTGTGTGCAGGACAGGGCCCTGCTG------CTTCC----------------GGA-CACCAGCGAGGAATCAGCTCAGCTCCACGTGCAGGCCCAGGCTTCACCTGTGACGGACGGGAGGTCGTGGGAGAGGGCTTCGAGCTGAGCGGAGCCAGG-----GCGGTTATCTCCTAGGCCTTCGCTAGAGTCAGACGGGGCAGGGGAGGCCCCGATTTATTCACTTCACT--TAGTCCCC----------------------------------------------------GAGACAGGTGAGC------------GGCTGGAGACGG-ACGTGCTTCACTGCACAAG-GCAGGGCC----TAGCATGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 905949 713 - 1291538 a--tacagagacagggtctcccaatgttgtccaggctggtttcgaacccctaggctcgagtgatctgcctgccttggcctcccaaagtgctgggatcataggcgtgagccacggtgcccggccTCTT-----ACTGATGTTTCTAAAGTCTCC-CTCTGCCTGTGAATTTCTTGTCT-CATTT--CCTCACCCAGGTCT-GCGCCTCTGTGTGCTCAGAGCCTTCTGCAGTGTCTCTGGGTTCCTCCTCCTG-TCT-TGCCAGCTCCTCTCACTCTCCAGTACCTGC--------ATCTCTGGGCCTCCATCTATG--------TCTCTCCCTCCCCAGGCCTTCCTG----------------TCACATATCTTCAAGGCCCTGCTTTCTTGGCCT-TGCGTTTGTGCCTCAGTTTCCCCCACCTGGGCTGGAATCTCAGTCCCTTCTCAGGCTCACCGGGTCTGTGGTCAGAGCTTAGGTG-TGGGGTGGACTGCCTGCTTTGCCTGGATCTTCTGTC-ACCCCAGGGGCAACCAAGGCAGG-GGGGCCTGCCCACTCCTTCCCATGTGCAGGCCAGGGCTCTGT------------------------------------------------------------------------------------------CAGGAGGCCCTGGGAGGGAGCTGCAAGCCGAGCGGAACCAGG-----GCAGTTGTCTCCCAGGGCTCCGCTGGAGCCTGGCAGGGTA-GGGAGGCCCAGATTTATTCAGTTCCCT--TAGTCCCC----------------------------------------------------GAGACAGGCGAGT------------GGCTGGAGGCAG-ATGCACTTCACTGTGCGA--GCGGAGCC----TGGCATGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75842731 554 + 122082543 T--CAAGAAATCTggatcttggaatgcgactcaagcta--cttgaaaccct----------------cctgccttgg--ttcctaagagctgggatcgcaggcgtgc------gcATCTGTATGCTC-----GAGGCT----------TGTCC-CTTTGTCTTT---TTTCTGGTCT-------------CCCATGTGT--------TGGGCATCC---------------------------------------------------------------------------------CCCTGGGCCACAGTTTCTG--------TCTCCTTCCCTCCCAGTTTCTCTG----------------TCATA--------------------------------GTTT--------------TCCACCTAGA--GGAGCCTCA-----------GATCCA-GGTGTCTGTGTTCAGAGACTGGCAA-GAGGATGGGCTGCCTGC-CTGCCTGGCTCTGATG-----------------------------GGCTCTC-------------------------GTCCCTGCCA----TGCCCCT----------------GGG--AAGACTGAGGAATCAAGCTGGGACCTTCTGCAATGTCAACCTTGCCCTGGCACGGACAGACAGTCCAGAAGGAGAGCTGT--GTAAGGCAGAGCCAGC-----ACTCTGA-CCCCCAGCACTTTCCTGGAACCAGGCGGGGT--GGGAGGTCCAGCTCTGCCCACTTCACTCCTATTCCCA----------------------------------------------------AAGGCCATTCAGTCCAGAGTGTGTGGGATGAAGTTGT-AGGT--TTGGCCA-GCAAG-GCAGGTGTGCAGCTGCAGAG i mm10.chr11 I 151 I 1 s canFam3.chr9 15665214 761 - 61074082 ---------------------------------AGTTGGTCT------------------------------CTTGGT------------------------------------------GCCTCTTTTAAGGCTGATGTTTTAAAAAGCCCCTCTCTGCCTTTG-----CTTTCCCTCGTTCTGCCT--TGTATGTCTGGTGTGTCTTTGTGTTCTGGGGCTTCCTGGTTTTCTCTTGGTTCCTCTTTCTGCTTTCAATCAGGTTCTCTC--TCTCCTGTCTC-ATCTCTTGGCATCTCCACTCATCTGTCTCTGGGTCTCTCTCTCTCTCTCCTCAGGCCTCACTGAGGAGAGAGAGAGAGAGTCCATTCCTTAAGGGTCTAGCCTTCCTGGCCTCTGGGTTCATCCTTCCGGCTCCTGCACCTAAGC-AGAGACTCA--------------------------------GAGCCTAGGGGTTGGGGTGGGCTGCTGGATCTACCTGGACCCTGGGTGGA-CCCAGAGACAAGTGAGGCAGGAGAGGCCTGGCC-TCCTGTCCTGCATGGAGATCTGGGCTCGGCCAGACTCTCTTCTCCTTGCTGTGGTTGCCAGGTCAGCAGTGGGGAATCAGCTCAGC-CTGTGTGCCAGGCCAGGCTTCACCTATGATGGACAGAAGACCCCAGGAGACAGCTGCG-GAAGAACGGAGCCAAGTTGGCATGGCTATCTCCTTGGGCTTTACTGGAGTCAGACAGGGCA-GGCAGGCCCAGGTTTATTCACTTCAGC--TAGGCCCCTGAAGGCTGAGAAATCTAGAGTGGGTAGGATGGGGTTATAGGTTCCCACAGTGAGACAGGTGAAT------------AGCTGGAGAGGGTGCGCACCTCACAGGGTTGGAGCCCAGCC----CTGCCTGG i canFam3.chr9 C 0 C 0 a score=8404.000000 s hg38.chr17_GL383563v3_alt 182714 4 + 375691 GCCA----- s panTro4.chr17 168759 4 + 82630442 GCCA----- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 66127 4 + 73212453 GCCA----- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 130737 4 - 81552678 GCCA----- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 92352 4 + 80904711 GCCA----- i rheMac3.chr16 I 121 C 0 s macFas5.chr16 93122 4 + 80997621 GCCA----- i macFas5.chr16 I 80 C 0 s papAnu2.chr16 100814 4 + 74645514 gcca----- i papAnu2.chr16 I 80 C 0 s chlSab2.chr16 95641 4 + 75148670 GCCA----- i chlSab2.chr16 C 0 I 494 s calJac3.chrUn_GL286409 906662 4 - 1291538 GCCC----- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75843286 4 + 122082543 GTTA----- i mm10.chr11 I 1 C 0 s canFam3.chr9 15665975 8 - 61074082 -CCCCTGGA i canFam3.chr9 C 0 C 0 a score=758161.000000 s hg38.chr17_GL383563v3_alt 182718 220 + 375691 GGCACACACGGGAGCTCTGCA------CACCAAAAGCAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCCCCACTCTCC-CAGTTCAGCTA-AGACAG---------GGGCAAGGGGCCCGCAGATGTCACCTTGCAGCTGG----AATTGACCAATCAGCCAAGGTTGTCATTGGGTCTCGGGCAAATTAGAGGCGACAGCCATGCTCCTGACCTCCGTGGTGTGGCTGATGAGGGCCTT--CT s panTro4.chr17 168763 220 + 82630442 GGCACACACGGGAGCTCTGCA------CACCAAAAGCAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCCCCACTCTCC-CAGTTCAGCTA-AGACAG---------GGGCAAGGGGCCCGCAGATGTCACCTTGCAGCTGG----AATTGACCAATCAGCCAAGGTTGTCACTGGGTCTCGGGCAAATTAGAGGCGACAGCCATGCTCCTGACCTCCGTGGTGTGGCTAATGAGGGCCTT--CT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 66131 220 + 73212453 GGCACACATGGGAGCTCTGCA------CACCAAAAGCAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCCCCACTCTCC-CAGTTCAGCTA-AGACAG---------GGGCAAGGGGCCCACAGATGTCACCTTGCAGCTGG----AATTGACCAATCAGCCAAGGTTGTCATTGGGTCTCAGGCAAATTAGAGGCGACAGAGATGCTCCTGACCTCCATGGTGTGGCTAATGAGTGCCTT--CT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 130741 220 - 81552678 GGCACACACGGGAACTCTGCC------CACCAAAAGGAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCCCCACTGTCC-CAGTTCAGCTA-AGACAG---------GGGCAAGGGGCCCGCAGATGTCACCTTGCAGCTGG----AATCAACCAATCAGCCAAGGTTGTCACTGGGTCTCGGGCAAATTAGAGGAGACAGCCATGCTCCTGACCTCCGTGACGTGGCTAATGAGGTCCTT--CT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 92356 218 + 80904711 GGCACACACGGGAGCTCTGCA------CACCAAATGGAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCTCCACTCTCC-CAGTTCAGCTA-AGACAG---------GGGCAAGGGGCCCGCAGATGTCACCGTGGAGCTGG----GATCGACCAGTCAGCCAAGGCTGCCACTGGGTCTTGGGCAGATTAGAGGCGACAGCCACACTCCTGACTGCCGTGGTGTGGCTGATGAGGGCCTT---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 93126 218 + 80997621 GGCACACACGGGAGCTCTGCA------CACCAAATGGAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCTCCACTCTCC-CAGTTCAGCTA-AGACAG---------GGGCAAGGGGCCCGCAGATGTCACCGTGGAGCTGG----GATCGACCAGTCAGCCAAGGCTGCCACTGGGTCTTGGGCAGATTAGAGGCGACAGCCACACTCCTGACTTCCGAGGTGTGGCCGATGAGGGCCTT---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 100818 218 + 74645514 ggcacacacgggagctctgca------cacCAAAAGGAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCTCCACTCTCC-CAGTTCAGCTA-AGACAG---------GGGCAAGGGGCCCGCAGATGTCACCGTGGAGCTGG----GATCGACCAGTCAGCCAAGGTTGCCACTGGGTCTTGGGCAGATTAGAGGCGACAGCCACGCTCCTGACTTCCGTGGTGTGGCTGATGAGGGCCTT---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 96139 224 + 75148670 GGCACACACGGGAGCTCTGCA------CACCAAAAGGAAGCCAGAGGCTGGCCCTTGGGG----GCTGGGCTCCACTCTCC-CAGTTCAGCTA-AGACAG---------GGGCGAGGGGCCCGCAGACGTCACCGTGGAGCTGGGATCGATCGACCCGTCAGCCAAGGTTGCCACTGGGTCTTGGGCGGATGAGAGGTGACAGCCGCGCTCCTGACTCCCGTGGTGTGGCTGACGGGGGCCTTCT-- i chlSab2.chr16 I 494 I 288 s calJac3.chrUn_GL286409 906666 225 - 1291538 GGCACACACGGGAACTCTGCATACCTCCACCAAAAGGAAGGCAGAGGCTGGCCCCTGGGG----TCTGGGCCCCACTGTCC-CAGTTCTGCTA-AGAT-G---------GGGCAAGGGGCCCACAGATGTCACGTTGCAGCTGG----AATCAACCAATCAGCTGAGGTTGTCATTGGGGTTTGGGCAAATTAGAGGTGACAGCCATGCTCCTGACCTCCGTGGTGTGGCTAATGAAGTCCGT--CT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75843290 224 + 122082543 ------TGCTGTA-CTCTGTA------CAGCGAGCTCAGCCCA---GCTGGCCCCAGGGGCAGCTCTGAGCCCCTTTGGCTGCACTTGAGCCAGACACAGCTTCCAGGAGGGCAAGGCACCTCAAGACCTCACCTTGCATATGG----GATTGGTTAATCCCCTGAGGCTGTCATTGGGT-TTGGGCAAATTAGAGATGACAGCCATGCCCCTAACCTTCCTGGTGTGGCTAATGAGGGCCTT--CT i mm10.chr11 C 0 C 0 s canFam3.chr9 15665983 227 - 61074082 GGCTGTGACAGGAACTCTGTGCACATCTACTGAACCAAAGCCAGAGGCTGGC---TGGAA----GCCCTGCTTCCCTGTGT-CCATTCAGATG-GGGTGG---GAGTGGGGACAAAGAGGCCTAAGACCTTGCCTTGCACTTGG----AATTGGCTAATCAACTGAGGTTATTACTGG--CTTGGACAAATCAGAATGGACAGCCATGCCCCCGACCTCTGTGGTGTGGCTAACGAGGGCCTT--CT i canFam3.chr9 C 0 C 0 a score=7960.000000 s hg38.chr17_GL383563v3_alt 182938 3 + 375691 GCT s panTro4.chr17 168983 3 + 82630442 GCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 66351 3 + 73212453 GCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 130961 3 - 81552678 GCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 92574 2 + 80904711 -CT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 93344 2 + 80997621 -CT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101036 2 + 74645514 -TT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 906891 3 - 1291538 GCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75843514 3 + 122082543 GTT i mm10.chr11 C 0 C 0 s canFam3.chr9 15666210 3 - 61074082 GCT i canFam3.chr9 C 0 C 0 e chlSab2.chr16 96363 288 + 75148670 I a score=1239742.000000 s hg38.chr17_GL383563v3_alt 182941 412 + 375691 -CTTGGAAATCCACCTCTAAGCCAGCGAGGAGGCCCACGACAGGCAGGTGGGCTGCTG------GGGGAAGAGGTCGGGTGTGGC-----AGGAAAGCAACAGCGGCTCATTTGTGCTCAGGACATCTGTTCTGGGGGCGGCCCCTCCATTCATGCCCCTCATCACTGAGCTTGTGTCTGGCTTAACCAAGAGCTCCAAAGGTCAAAACAAATTCGTGTGTGTGAGCTTCCGTTTCAAAACACCCGCCAAGCAAGACGTGGCCGGGCCTCTACTCCCCTGAGATTTAGGGAAAGGGC--AGTTTCCTGACTGCTGCAGGTGTTTctctgcctttccatgctgagactacggtgcaaattatttgacctctccatgacttagtttcctattctgtaaaatgggacaacagtagcgg---------ccccgtcacag s panTro4.chr17 168986 409 + 82630442 -CTTGGAAATCCATCTCTAAGCCAGCGAGGAGGCCCACGACAGGCAGGTGGGCTGCTG------GGGGAAGAGGTCGGGTGTAGC-----AGGAAAGCAACAGCAGCTCATTTGTGCTCAGGACATCTGTTCTGGGGGCGGCCCCTCCATTCACGCCCATCATCACTGAGCTTGTGTCTGGCTTAACCAAGGGCTCCAAAGGTCAAAACAAATTCGTGTGTGTGAGCTTCCGTTTCAAAACA-CTGCCATGCGAGACGTGGCCGGGCCTCTACTCCC--GAGATTTAGGGAAAGGGC--AGTTTCCTGACTGCTGCAGGTGTTTctctgcctttccatgctgagactacggtgcgaattatttgacctctccgtgacttagtttcctattctgtaaaatgggacaacagtagtgg---------ccccatcacag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 66354 416 + 73212453 -CTTGGAAATCCATCTGTAAGCCAGCAAGGAGGCCCACAATAGGCAGGTGGGCTGCTG------GGGGAAGGGGTCGGGTGTAGCAGGTGAGGAAAGCAACAGCAGTTCATTTGTGCTCAGGACATCTGTTCAGGGGGCGGCCCCTCCATTCACACCCATCATCACTGAGCTTGTGTCTGGCTTAACCAAGGGCTCCAAAGGTCAAAACAAATTCGTGTGTGTGGGCTTCCGTTTCAAAACA-TTGCCATGCAAGACGTGGCCGGGCCTCTACTCCCCTGAGATTTAGGGAAAGGGC--AGTTTCCTGACTGCTGCAGGTATTTctctgcctttccatgctgagactatggtgcaaattatttgacctctccgtgacttagtttcctcttctgtaaaatgtgacaacagtagtgg---------ccccatcacag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 130964 416 - 81552678 -CTTGGAAATCCATCTCTAAGCCAGCGAGGAGGCCCACGACAGGCAGGTGGGCCGCTG------GGGGAGGGGGTCGGGTGCAGCAGGTGAGGAAAGCAACAGCAGCTCATTCGTGCTCAGGACATCTGTTCTGGGAGAGGCCCCTCCATTCACGCCCATCATCACTGAGCTTGTGTCTGGCTTAACCAATGGCTCCAAAGGTCACAACAAATTCATGTGTGTGGGCTTCCGTTTCAAAACA-CTGCCATGTAAGACACAGCTGGGCCTCTACTCCCCTGAGACTTAGGGAAAGGGC--CGTTTCCTGACTGCTGCAGGTAGTTctctgcctttccatgctgagactacggtgcaaactatctgacctctccgtgacttagtttcctcttctgtaaaatgggacaacagtagtgg---------ccccatcacag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 92576 400 + 80904711 -CTTGAAAACCAATCTCTAAGCCAGCGAGGAGGCCCGCAACGGGCGGGTG--------------GGGAAAGGCGTCGGGTGCAGCAGGTGAGGAAAGCGACAGTAGCTCGTTCGTGCCCAGGACTTCTGTTCTGGGGGTGGCCCCTCCATTCGTGCCCATCATCACCGAGCTTGTGTCTGGCTTAACCAAGGGCTCCAAAGGTCAAAACAAATTC--GTGTGTGGCCTTCCCTTTCAAAACA-TTGCCATGCAAGATGTGGCCGGGCCTCTACTCCCCGGAGATTCACGGAAAGGGC--GGTTTCCTGACCACTGCGGGTATTTctctgcctttccacgctgagactacggtgcggattatttgacctctctggtacttagt------ttctgtgaaatgggacaatagtagtgc---------ctccatcacaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 93346 400 + 80997621 -CTTGAAAACCAATCTCTAAGCCAGCGAGGAGGCCCGCAACGGGCGGGTG--------------GGGGAAGGCGTCGGGTGCAGCAGGTGAGGAAAGCGACAGTAGCTCGTTCGTGCCCAGGACTTCTGTTCTGGGGGTGGCCCCTCCATTCGTGCCCATCATCACCGAGCTTGTGTCTGGCTTAACCAAGGGCTCCAAAGGTCAAAACAAATTC--GTGTGTGGCCTTCCCTTTCAAAACA-TTGCCATGCAAGATGTGGCCGGGCCTCTACTCCCCGGAGATTCACGGAAAGGGC--GGTTTCCTGACCACTGCGGGTATTTctctgcctttccacgctgagactacggtgcggattatttgacctctctggtacttagt------ttctgtgaaatgggacaatagtagtgc---------ctccatcacag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101038 400 + 74645514 -CTTGGAAACCAATCTCTAAGCCAGCGAGGAGGCCCACAACGGGCGGGTG--------------GGGGAAGGGGTCAGGTGCAGCAGGTGAGGAAAGCAACAGTAGCTCATTCGTGCTCCGGACTTCTCTTCTGGGGGTGGCCCCTCCATTCGTGCCCATCGTCACCAAGCTTGTGTCTGGCTTAACCAAGGGCTCCAAAGGTCAAAACAAATTC--GTGTGTGGGCTTCCCTTTCAAAACA-CTGCCATGCAAGATGCGGCCGGGCCTCTACTCCCCGGAGATTCACGGAAAGGGC--GGTTTCCTGACCGCTGCGGGTATTTCTCTGCCTTTCCATGCTGAGACGACGGTGCGGATTATTTGACCTCTCCGGTACTTagt------ttctgtaaaatgggacaataGTAGTGC---------CTCCATCACAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 96651 406 + 75148670 -CTTGG-AATCAATCTCTAAGCCCGCGAGGAGGCCCACGACAGGCAGGTGGGCTGCT-------GGGGAAGGCGTCGGGTGCAGCAGGTGAGGAAAGCAACAGTAGCTCATTCGTGCCCAGGACTTCTGCTCTGGGGGTGGCCCCTCCATTCACGCCCATCATCACCGAGCTTGTGTCGGGCTTAACCAAGGGCTCCAAAGGTCAAAACAAATTC--GTGTGTGGGCTTCCCTTTCAAAACA-CTGCCATGCAAGACGCGGCCGGGCCTCTGCTCCCCGGAGCTCCACGGAAAGGGC--GGTTTCCCGACTGCTGCAGGTATTTctctgcctttccatgctgcaactacggtgcagattatttgacctctccggtacttagt------ttctgtaaaatgggacaatagcagtgc---------ctccatcacag i chlSab2.chr16 I 288 C 0 s calJac3.chrUn_GL286409 906894 411 - 1291538 -CTTGGAAATCAACCTCTAAGCCAGCGAGGAGGCCCAGGACAGGCAGGTGGGCTGCTA------GAGGATGGGGTCAGGTGCAGCAGGTGAGGAAAGCAGCAGTAGCTTGCTGATGCTCAGGACTTCTGTTCTGGTGGGGGGACCTCCATTCACACCCACCATCACTGAGCTTGTGTTTGGCTTAACCAAGGGCTCCAAAGGTCAGAACAAATTCGTGTGCGTTGGCTTCCCTTTGAAAACA-CTGCCACGCGGGATGTGGCCGGG--TATACTTCCCTGAGATTTAGGGAAAGGGC--AGTTTCCCGACTGCCACAGGTGTTTCTCTGCCTTTCCATGCTGAGACTACCGTgcaaattatttga-ctctctgtgacttagtttcctgttctgtaaaatggg--agtagcagtgc---------cctcatcgcag i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75843517 340 + 122082543 -CTGGGAAATCAATTTCTAAGCCAGCACAGACA-TTAGGACAGGCAGGGG--CTTCTGTGGGAAGGGGAAGGTGTAGAGTGTAGAGTGGGA---------------CTCTCCCCTATTGAAGGTTCCTGCTTTGAGA---------------------------------CTGCTGCTCAGCATAACCCAGGGCTT--AAAGGCAGGATGAGGCCACATGCATGGGCTTTCCCTTTAACGCA-GGACCA---------CAGCTGTATCTCT--------GAGAGCTACAGGAGGAAC--AATTTCTGGAACACTGAAGGCATTTCTTGTCCTCTCTATGTTAAGAC------ACACGCTATTTGGGCTCT---GTACCCTGCGACCCCTTTTGT-AAATGGG-CAAGTGTAGCA----------CTCTGTTCCAG i mm10.chr11 C 0 I 58 s canFam3.chr9 15666213 364 - 61074082 CTTGGGGAATCAATCCCCAAGCCAGTGAGGATGCCCAGGATAAGCAGGAGGGCTTCT-------GGGGCAGGAGTGCAGTGCAGC-------------------------------CGAGGTGCTTCTGTTCTGAGGGTGTCCCTCCCATTCCCAAACACTGGCATTGGGCTCGTGTTTGGCTTCACCAAGGGCTCTGAAGGTCAAGACAAATTAGTATGCATGGGTTTTTCTTTCAAAATA-CAGCCACATAAGAGATGGCCAAGCCTCTACTTCCCTGGGATTTAGGGAAAGGACAGAGTTTCCTGAACACTGAGGGGATCCCTCTG----TCCACACTGAGATCAC-----------------CTCTCCATGCCCTA----------CTATGCAATGGGACAAGAGTAGCTCCCCCCACTGCCCCGCCCCA- i canFam3.chr9 C 0 C 0 a score=133639.000000 s hg38.chr17_GL383563v3_alt 183353 41 + 375691 gttgttgggggatgacacgaaataacggagacgcacagcgc s panTro4.chr17 169395 41 + 82630442 gttgttgggggatgacacgaaataacagagatgcacagagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 66770 41 + 73212453 gttgttggggaatgacacaaaataacagagatgcatagcac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 131380 41 - 81552678 gttgttgggggatgacacgaaataacagagatgcacagcgc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 92976 41 + 80904711 gttgatgggggatgacacgaaataacagagatgcacagcgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 93746 41 + 80997621 gttgatgggggatgacacgaaataacagagatgcacagcgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101438 41 + 74645514 GTTGATGGGGGGTGACACGAAATAACAGAGATGCACAGCGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97057 41 + 75148670 gttgatgggggatgacacgaaataacagagatgcacagcgc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 907305 41 - 1291538 gttgttgggggatgacatgaagtcacagagatgcgtagcac i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15666577 39 - 61074082 GTTATCTGGGGATTCCATGAAACAA--GGAGTGCACAGAGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75843857 58 + 122082543 I a score=491496.000000 s hg38.chr17_GL383563v3_alt 183394 167 + 375691 ccaggacagcct--gcaatgagcacccgtgtc----------------------------------atctatggcagctACAGCTGTT-GC------TGTTTTTATCGGACTCCTCAGCACCAAGGG---CCAAAGCCC----ATCCCTTTTACCTGCACAGACAGACAGGCAAATGGTACCCAGGCCTCGGCTGACCCTGGCAGAATGGCAGCTGC s panTro4.chr17 169436 167 + 82630442 ccagcacagcct--gCAATGAGCACCCGTGTC----------------------------------ATCTACGGCAGCTACAGCTGTT-GC------TGTTTTTATCGGACTCCTCGGCACCAAGGG---CCAAAGCCC----ATCCCTTTTACCTGCACAGACAGACAGGCAAATGGTACCCAGGCCTCGGCTGACCCTGGCAGAATGGCAGCTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 66811 160 + 73212453 ccagcgcagcct--gCAATGAGAAACCGTGTC----------------------------------ATCTAGGGCAGCTACGGCTGT----------TGTTTTTATCGGACTCCTCGGCACCGAGGG---CCAAAGCCC----ATCCCTTTTACCTGC----ACAGACAGGCAAATGGTACCCAGGCCTCGGCTGACCCAGGCAGAATGGCAGCTGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 131421 165 - 81552678 ccagcacagcct--gcagtgagcaaccatgtc----------------------------------atctatggcagctACGGCTGTT-GC------TGTCTTTATCGGACTCCTCGGCACTGAGGG---CCAAAGCCC----GTCCCTTTTA-CTGCACAGACAGATAGGC-AGTGGTACCCAGGCCTCAGCTGACCCTGGCAGAATGGCAGCTGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 93017 167 + 80904711 ccagcgcagcct--gcaacgagcaaccgtgtc----------------------------------atctgtggtggctGCTGCAGGT-GC------CGTTTTTATCTGACTCCTCGGCACCGAGGG---CCAAAGCCC----GTCCCTTTTACCTGCACAGACAGATGGGCAAATGGTACCCAGACCTCAGCTGAGCCGGGCAGAATGGCAGCTGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 93787 167 + 80997621 ccagcgcagcct--gcaacgagcaaccgtgtc----------------------------------atctgtggtggctGCTGCAGGT-GC------CGTTTTTATCTGACTCCTCGGCACCGAGGG---CCAAAGCCC----GTCCCTTTTACCTGCACAGACAGATGGGCAAATGGTACCCAGACCTCAGCTGAGCCGGGCAGAATGGCAGCTGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101479 167 + 74645514 CCAGCACAGCCT--ACAACAAGCAACCGTGTC----------------------------------ATCTGtggcggctgctgctgct-gc------tgtttttatCTGACTCCTCGGCACCGCGGG---CCAAAGCCC----GTCCCTTTTACCTGCACAGACAGATGGGCAAATGGTACCCAGGCCTCAGCTGAGCCGGGCAGAATGGCAGCTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97098 166 + 75148670 ccagcgcagcct--gcaacgaacaaccgtgtc----------------------------------atctgtggcagctACGGCTGCT-GC------TGTTTTTATCTGACTCCTCGGCACCGAGGG---CCAAAGCCC----GTCCCTTTTGCCTGCACAGACAGA-AGGCAAATGGTACCCAGACCTCAGCTGAGCCTGGCAGAATGGCAGCTGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 907346 170 - 1291538 ctggtacagCCC--GCAGTGAGCAACCGTGTC----------------------------------A-CTGCGGCAGGCACTGCTGTG-GCTTTTTGTGTTTTCATCCGACTACTCAGAACCAAGGC---CTGAAGCCT----GTCCCTCTTACCTGCACTGACAGACAGGCAGATAGTACCCAGGCCTCAG--GAACCTGGCAGAATGGCAGCTGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75843915 187 + 122082543 CCAGGAAGGCGTGGGTAATCAGCTCATGAGTCCCACACAGTCCCCACCACATATTGCAAACCCTGAATCTGCAGCAGCTACCACTGGGAGC------TGCT------GGATACCACAGCAAAGGAGGGGTGCAAGACCCCTCTGTCCCTCCTACATGCACA-------AGACAAAGG----------CTTTGCTGGGCCTGGT-GAAAGGTAGCCGC i mm10.chr11 I 58 I 129 s canFam3.chr9 15666616 164 - 61074082 CTGGCACAGGCT--GCAGTGAGCAACCATGCA----------------------------------ATCCTTGGCAGCTACAGTTGTT-GC------TGATTTTATTTGGCCACTCAGCACTGAGGC---CTGAGGCT-----GCCTCTTTCACCTGCACAGACCTACAGGCAAACAGCACCCGGGCCCT--CAGAGCGTGGAGAAATGGTGGCCAC i canFam3.chr9 C 0 C 0 a score=314227.000000 s hg38.chr17_GL383563v3_alt 183561 108 + 375691 CTGAGAAGACCAA-----GGCCGACTATCAGTGTCTCTCCCAGCGGGA--------------------------------------------CCCACGGTGGCCTCAGGCAGTGCAGCGTCACCCCCCTCCCCTCGCCCTGTCTCAGCTGGGAGGGA s panTro4.chr17 169603 108 + 82630442 CCGAGAAGACCAA-----GGCCGACTATCAGTGTCTCTCCCAGCGGGA--------------------------------------------CCCACGGTGGCCTCGGGCAGTGCAGCGTCACCCCCCTCCCCTCGCCCTGCCTCAGCTGGGAGGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 66971 107 + 73212453 CTGAGAAGACCAA-----GGCCGACTGTCAGTGTCTCTCCCAGTGGGA--------------------------------------------CCCACGGCGGCCTCAGGCAGTGCAGCATCA-CCCCCTCCCCTTGCCCTGCCTCAGCTGGGAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 131586 107 - 81552678 CTGAGAAGACCAA-----GGCCGACTGTCAGCGCCTCTCCCAGCGGAA--------------------------------------------CCCACGGCGGCCTCGGGCAGTTCAGCGTCA-CCCCCTCCCCTCGCCCTGCCTCAGCTGGGAGGGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 93184 107 + 80904711 CTGAGAAGACCAA-----GGCCGACTGTCAGTGTCTCTCCCAGCGGGA--------------------------------------------CCCACCGCGGCCTCGGGCAGCGCGGCGTCA-CCCCCTCCCCTCGCCCTGCCTCAGCTGGGATGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 93954 107 + 80997621 CTGAGAAGACCAA-----GGCCGACTGTCAGTGTCTCTCCCAGCGGGA--------------------------------------------CCCACCGCGGCCTCGGGCAGCGCGGCGTCA-CCCCCTCCCCTCGCCCTGCCTCAGCTGGGATGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101646 107 + 74645514 CTGAGAAGACCAA-----GGCCGACTGTCAGTGTCTCTCCCAGCGGGA--------------------------------------------CCCACCGCGGCCTCGGGCAGCGCGGCGTCA-CCCCCTCCCCTCGCCCTGTCTCAGCTGGGATGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97264 107 + 75148670 CTGAGAAGACCAA-----GGCCGACTGTTAGCGTCTCTCCCAGCGGGA--------------------------------------------CCCACCGCGGCCTTGGGCAGCGCGGCGTCA-CCCCCTCCCCTCGCCCTGCCTCAGCTGGGATGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 907516 156 - 1291538 ACGGGAAGACTGATGCCTGGCTAACTGCCAGTGTTTCTCCCAGCGGGACCTGCCTGGGTCTCGGGCAACGCTGTGCCGCCTTCTCCCCTCACCCTGCCTCGGCCTCGGGCAGCGCTTTGTCA-CCCTCTCCCCTCGCCCTGCCTCAGGTGGGATGGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15666780 110 - 61074082 GTGAGAAGACTGCCAACTGCCTGACTATGGGTGTTTGCCCTGGTGTGG--------------------------------------------TCCACAGGGG-TTTGGGCAACCTAGCACCATCCCCATCACCTTCTCCTGCTCATG--GAGAAGGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75844102 129 + 122082543 I a score=509151.000000 s hg38.chr17_GL383563v3_alt 183669 149 + 375691 TGACATTCA-TTCCCCAAGTGTCTGGCTGGACCAGAGCCACAGACA---CAACTGTCTATGACATTGTTTGATTGTTTATTTTCTTGACCCAAACAGCAGACCTGCACCAGGGAGATCTGAGTCAGTGGCT-TCCAAGGTGCCACACAGGGCCT s panTro4.chr17 169711 149 + 82630442 TGACATTCA-TTCCCCAAGTGTCTGGCTGGACCAGAGCCACAGACA---CAACTGTCTATGACATTGTTTGATTGTTTATTTTCTTGACCCAAACAGCAGACCTGCACCAGGGAGATCTGAGTCAGTGGCT-TCCAAGGTGCCACACAGGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67078 149 + 73212453 TGACATTCA-TTCCCCAAATGTCTGGCTGGACCAGAGCCACACACA---CAACTGTCCATGACATTGTTTGATTGTTTATTTTCTTGACCCAAACAGCAGACCTGCACCAGGGAGATCTGAGTCAGTGGCT-TCCAAGGTGCCACGCGGGGCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 131693 149 - 81552678 TGACATTCA-TTCCCCAAATGTCTGGCTGGACCAGAGCCACAGACA---CAACTGTCTATGACATTGTTTGATTGTTTATTTTCTTGACCCAAACAGCAGACCTGCACCAGCGAGATCTGAGTCAGCGGCT-TCCAAGGTGCCACACGGGGCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 93291 149 + 80904711 CGACATTCA-CTCCCCAAACGTCTGGCTGGACCAGAGCCACAGACA---CGACTGTCTATGACGTTGTTTGATTGTTTGTTTTCTTGACCCAAACAGCAGACCTGCACCAGGGAGATCTGAGTCAGCGGCT-TTCGAGGTGCCACACGGGGCCT i rheMac3.chr16 C 0 I 880 s macFas5.chr16 94061 149 + 80997621 CGACATTCA-CTCCCCAAACGTCTGGCTGGACCAGAGCCACAGACA---CGACTGTCTATGACGTTGTTTGATTGTTTGTTTTCTTGACCCAAACAGCAGACCTGCACCAGGGAGATCTGAGTCAGCGGCT-TTCGAGGTGCCACACGGGGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101753 149 + 74645514 CGACATTCA-CTCCCCAAACGTCTGGCTGGACCAGAGCCACAGACA---CCACTGTCTATGACATTGTTTGATGGTTTGTTTTCTTGACCCAAACAGCAGACCTGCACCAGGGAGATGTGAGTCAGTGGCT-TTCGAGGTGCCACACGGGGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97371 149 + 75148670 TGACATTCA-CTCCCCAAACGTCTGGCTGGACCAGAGCCACAGACA---CGACTGTCTATGACATTGTTTGATTGTTTATTTTCTTGACCCAAACAGCAGACCTGCACCAGGGAGATCTGAGTTAGTGGCT-TTCGAGGTGCCACACGGGGCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 907672 148 - 1291538 CAACATTCA-TT-CCCAAATGTCTGGCTAGACCAGAGTCACAGACA---CAACCATCTGTGACATTGTTTGATTGTTTATTTTCTTGACCCAAACAGCAGCCCTACACTCGGGAGATCTGAGTGAATGGCT-TTCAAGGAACCACACAGGGCGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75844231 122 + 122082543 TGACATCCA---------------AGTTCTCCCACAGCC-CAGACAAACCAACTTTCTTGCAC-------------TTATTTCCTTTACCCAGGCGGTGGCCCTGCACTGTAAAGACCAGGTTCAAAGACA-TG-GAGGTGCC-TGTGGGACCA i mm10.chr11 I 129 C 0 s canFam3.chr9 15666890 143 - 61074082 TAACATTCAGTTCCCCAAATGGCTGGTGGG-----AGCCCCAGACA---GCGCTGTCTCTGACTCTTCT---TTATTTACCTTCTGGACCCAAACAGCAGACCTACACCATGCAGACCTGAACCAGGGGGTGTCTGGGGTTCTGTGAGGGACCC i canFam3.chr9 C 0 C 0 a score=142110.000000 s hg38.chr17_GL383563v3_alt 183818 74 + 375691 GTGGTGCCGTTCTCAGGTGGTTCAAAGACAACTCCCCCCTTCCTTGT-CTCTAAACAGTCCTTTCCGGC--gtgtgt s panTro4.chr17 169860 68 + 82630442 GTGGTGCTGTTCTCAGGTGGTTCAAAGACAACTCCCCCCTTCCTTGT-CTCTAAACAGTCCTTTCCGGC-------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67227 68 + 73212453 GTGGTGCTGTTCTCAGGTGGTTCAAAGACAACTCCCCCCTTCTTTGT-CTCTAAACAGTCCTTTCCGGC-------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 131842 76 - 81552678 GCGGTGCTGTTCTTAGGTGGTTCAAAGACAACTCCCCCCTTCCTTGT-CTCTAAACAGTCCTTTCCGGGgtgtgtgt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 94210 70 + 80997621 ACAGCGCGGTTCTCAGGTGGTTC--AGACAA--CCCCCCTTCCTTGT-CTCTAAAGGGTCCTTTCTGGC--gtgtgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101902 72 + 74645514 ACAGCGCGGTTCTCAGGTGGTTCAAAGACAA--CCCCCCTTCCTTGT-CTCTAAACGGTCCTTTCTggc--gtgtgt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97520 68 + 75148670 ACAGTGCGGTTCTCAGGTGGTTCAAAGACAACTCCCCCCTTCCTTGT-CTCTAAACGGTCCTTTCTGGC-------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 907820 71 - 1291538 ACAGGGCTGTTCTCAGGTGACTC--AGACAAC-TGTCCCTCCCTTGT-CTCTAAACAGTCCTTTCTGGC--TTGTGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75844353 57 + 122082543 ATGGGGCC-TTCTCAGGTGGCTCA---------CGCTGACTCTCGGTCCTCTAATTAGTCCTTCTTG---------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15667033 64 - 61074082 ACAGTGCC-TTCTCAGATGGCTAGAAGCC----TCTCCCGCCCTCCT-CTCTAAA-----CCTCCTGGC--TCGTGT i canFam3.chr9 C 0 C 0 e rheMac3.chr16 93440 880 + 80904711 I a score=31867.000000 s hg38.chr17_GL383563v3_alt 183892 14 + 375691 gtgtgtgtgtgtgt s panTro4.chr17 169928 14 + 82630442 gtgtgtgtgtgtgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67295 14 + 73212453 GCGCGTGCGTGCGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 131918 14 - 81552678 gtgtgtgtgtgtgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 94320 14 + 80904711 gtgtgtgtgtgggt i rheMac3.chr16 I 880 C 0 s macFas5.chr16 94280 14 + 80997621 gtgtgtgcgtgtgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 101974 14 + 74645514 gcgcgtgtgtgtgt i papAnu2.chr16 C 0 I 376 s chlSab2.chr16 97588 10 + 75148670 ----gtgtgtgtgt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 907891 14 - 1291538 GTCAGAGTGAGTGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15667097 11 - 61074082 --GTGTGTGTGTG- i canFam3.chr9 C 0 C 0 e mm10.chr11 75844410 0 + 122082543 C a score=44072.000000 s hg38.chr17_GL383563v3_alt 183906 27 + 375691 gtgtgtgtgtgtgtgtgtgtgtgtgtg s panTro4.chr17 169942 27 + 82630442 gtgtgtgtgtgtgtgtgtgtgtgtgtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309 6 + 73212453 GCGTGT--------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 131932 27 - 81552678 ttgtgtgtgtgtgtgtgtgtgtgtgtg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 94334 27 + 80904711 gtgcgtgtgtgtgcgcatgtgtgtgCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 94294 27 + 80997621 gtatgtgtgtgtgtgcgtgtgtgtatg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 102364 27 + 74645514 gtgtgggtgtgggtgtgtgtgggtatg i papAnu2.chr16 I 376 C 0 s chlSab2.chr16 97598 27 + 75148670 gtgtgtgtgtgtgtgtgtgtgtgtctg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 907905 27 - 1291538 GCAAgtgtgtgagtgtgtgtgtgtgtg i calJac3.chrUn_GL286409 C 0 I 262 s mm10.chr11 75844410 21 + 122082543 ------GGCTGGGTGCCCTTGTGTATG i mm10.chr11 C 0 I 2 s canFam3.chr9 15667108 7 - 61074082 ------------------GTGTGTT-- i canFam3.chr9 C 0 C 0 a score=7233.000000 s hg38.chr17_GL383563v3_alt 183933 3 + 375691 tgt s panTro4.chr17 169969 3 + 82630442 tgt i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 131959 3 - 81552678 tgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 94361 3 + 80904711 TGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 94321 3 + 80997621 tgt i macFas5.chr16 C 0 I 401 s papAnu2.chr16 102391 3 + 74645514 tgt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97625 3 + 75148670 tgt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 908194 3 - 1291538 TGG i calJac3.chrUn_GL286409 I 262 C 0 s mm10.chr11 75844433 3 + 122082543 TGG i mm10.chr11 I 2 C 0 s canFam3.chr9 15667115 3 - 61074082 TAG i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67315 0 + 73212453 C a score=930575.000000 s hg38.chr17_GL383563v3_alt 183936 347 + 375691 TGGCTTCTATTAGC--TTTACATTTCAAAAA-----TCCCAGGTACTTC---CAGCTCCCTGGGACTACAGAATCCATGCAGGGAGGAAAATGAACAGAGATGGGGAAGGTGATAATTAAGCATAAGAGGCCTTCCTGGGGCTAGGACTTGGGAAGGAAGCTTCAGTCAGTTCAT-GGCACTTAGTGAGCGCTTATCAAA--------------GCATAGTGGGGATGCTG---------GGTGGGTCTGACGGGATTTCGTTTGACAGCAtgtgcc--tgtctgtgt--g-----gcatgtgtgcgtgtgtgtgC------------------------AGAGGGTGGGGCCAACACGGAAATGGGGCTGGGCTTTCCAGTAG-AGCC------------TGATCTGAGAGCTGCCTTACCAGCCA s panTro4.chr17 169972 347 + 82630442 TGGCTTCTATTAGC--TTTATATTTCAAAAA-----TCCCAGGTACTTC---CAGCTCCCCGGGACTACAGAATCTATGCAGGGAGGAAAATGAACAGAGACGGGGAAAGTGATAATTAAGCATAAGAGGCCTTCCTGGGGCTAGGACTTGGGAAGGAAGCTTCAGTCAGTTCAT-GGCACTTAGTGAGCGCTTATCAAA--------------GCACAGTGTGGATGCTG---------GGTGGGTCTGACGGGATTTCATTTGGCAGCACGTGCC--TGTCTGTGT--G-----GCACGTGTGCGTGTGTGTGC------------------------AGAGGGTGGGGCCAACACGGAAATGGGGCTGGGCTTTCCAGTAG-AGGC------------TGATCTGAGAGCTGCCTTACCAGCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315 340 + 73212453 ----TTCTATTAGC--TTTATATTTCAAAAA-----TCCCAGGTACTTC---CAGCTCCCCGGGACTACAGAATCCATGCAGGGAGGAAAATGAACAGAGACAGGGAAGGTGATAATTAAGCTTAAGAGGTCTTCCCGGGGCTAGGACTTGGGAAGGAAGCTTCAGTCAGTTCAT-GGCACTTAGTGAGTGCTTACCACA--------------GCACAGTGGGGACGCTG---------GGTGGGTCTGACGGGATTTCATTTGGCAGCACATGC------CTGTGT--G-----GCACGTGTGCGTGTGTGTGC------------------------AGAGGGTGGGGCCAACGTGGAAATGGGACTGGGCTTTTTCATGGTAGGC------------TGATCTGAGAGCTGCCTTGCCAGCCA i ponAbe2.chr17 C 0 I 625 s nomLeu3.chr19 131962 343 - 81552678 TGGCTTCTATTAGCTTTTTATATTTCAAACA-----TCCCAGGTACTTC---CAGCTCCCTGGGACTACAGAATCCATGCAGGGAGGAAAATGAACGGAGACGGGGAAGGTGATAATTAAGCATAAGAGACCTTCCTGGGGCTAGGACTTGGGAAGGGAGCTTCAGTCAGTTCAC-GGCACTTAGTGAGCGCTTATCACA--------------GCACAGTGGGGATGCTG---------GGTGGGTCTGACGGGATTTCATTTGGCAGCACGTGC------CTGTGT--G-----GCGCGTGTGC--GTGTGTGC------------------------AGAGGGTGGGGACGACGCGGAAATGGGGCTGGGCTTTCCAGTAG-AGGC------------TGATCTGAGAGCTGCCTTACCAGCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 94364 338 + 80904711 GGGCTTCTATTAGCTTTTTATATTTCAAAAA-----TCCCAGGTACTTC---CAGCTCCCTGGGACCAGAGAACCCATGCAGGGAGGAAAATGAAT-GAGACGGAGAAGGTGCTAATTGAGCATAAGAGGCCTTCCTGGGCCTAGGACCTGGGCAGGAAGCTTCGGTTAGTTCAC-GGCACTTAGTGAGCGTTTATCCCA--------------GCACAGCGGGGGTGCCG----------GGGGGTCTGACGGGATTTCGTTTGGCAGCACACGC------CTGTCC------------GTGCGCGTGTGTGCAA------------------------AGAGGGTGGGGCCGATGCGGAAATGGGGCTGGGCTTTCCAGCAG-AGGC------------TGATCTGAGAGCTGCCTTATCAGCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 94725 338 + 80997621 GGGCTTCTATTAGCTTTTTATATTTCAAAAA-----TCCCAGGTACTTC---CAGCTCCCTGGGACCAGAGAACCCATGCAGGGAGGAAAATGAGT-GAGACGGAGAAGGTGCTAATTGAGCATAAGAGGCCTTCCTGGGCCTAGGACCTGGGCAGGAAGCTTCGGTTAGTTCAC-GGCACTTAGTGAGCGTTTATCCCA--------------GCACAGCGGGGGTGCCG----------GGGGGTCTGACGGGATTTCGTTTGGCAGCACACGC------CTGTCC------------GTGCGCGTGTGTGCAA------------------------AGAGGGTGGGGCCGATGCGGAAATGGGGCTGGGCTTTCCAGCAG-AGGC------------TGATCTGAGAGCTGCCTTATCAGCCC i macFas5.chr16 I 401 C 0 s papAnu2.chr16 102394 337 + 74645514 gggCTTCTATTagctttatat-ttcaaaaaa-----tccCAGGAACTTC---CAGCTCCCTGGGACCAGAGAACCCATGCAGGGAGGAAAATGAAC-GAGACGGAGAAGGTGCTAATTGAGCATAAGAGGCCTTCCTGGGCCTAGGACCTGGGCAGGAAGCTTCGGTTAGTTCGC-GGCACTTAGTGAGCGTTTATCCCA--------------GCACAGCGGGGGTGCCG----------GTGGGTCTGACGGGATTTCGTTTGGCAGCACACGc------ctgtct------------gtgcgtgtgtgtgcaa------------------------aGAGGGTGGGGCCAATGCGGAAATGGGGCTGGGCTTTCCAGCAG-AGGC------------TGATCTGAGAGCTGCTTTATCAGCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97628 331 + 75148670 TGGCTTCTATTAGCTTTTTATATTTCAAAAA-----TCCCAGGAACTTC---CAGCTCCCTGGGACCAGAGAACCCATGCAGGGAGGAAAAGGAAC-GAGACGGAGAAGGTGCTAATTGAGCGTAAGAGGCCTTCCTGGGCCTACGACCTGGGCAGGAAGCTTCGGTTAGTTCAT-GGCACTTAGTGAGCGTTTATCCCA--------------GCACAGCGGGGGTGCCG---------AGCGGGTCTGCCGGGATTTCGTTTCGCAGCACGTGC------CTGTCC--------------------ATGTGCAA------------------------AGAGGGCGGGGCCAATGCGGAAATGGGGCTGGGTTTTCCAGTGG-AGGC------------TGATCTGAGAGCTGCCTTATCAGCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 908197 343 - 1291538 TGGCTTCTATTAGC--TTTATATTTCAAAAA-----TCCCAGGTATTTC---CAGCTCCCCAGGACTCTAGAACCCACACAGGGAGG-AATTGAGTGGAGACAGGG-AGGTGATAATTAGGCATAAGAGGCCATCCTGGGGCTGGGAC--------------TCGGCTAGTTCAC-AACACT--GTGAGCACTTATCACA--------------GCACGGTGGGGCTGCTG---------GGTTGGTCTGACGGGATTTCACTGGGCAGCACATGC------CTGTGT------------GTGTGTATGTGCGCACGCACACATGCGTGCACACACACAAAGCGGGCAGGGCCAGCATGGAAATGGGGCTGGGCTTCCCAGTAG-AG-C------------TTATCTGAGAGCTGCCCTGTCAGCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75844436 321 + 122082543 TGGCTTCTACTATC--TTTACATTTAAAAAAAAAAGCCCTAGTTACCTTCCACAGCATCTTAAGATCATAAAGCCCCTGCGAGGAGTAGAATTAGCAGAGATGGG--ACGTGGCAA-GACGTACAGAAGACAATGTTGCAA-TGGGACT---GCAGGA-----CAGCGTGTTC------------TGAGCACTTAGCACA--------------GTATGAGATGGA-GCTG----------GGCAGTCTGATCAGGCTTTG-GGGGCAGTATGGGG------GTGGGTGGG-----GAGTGTGTGTGTGTGTGTAC------------------------CCATGGGGGGGAGGGGAGGGGA--GGGGCCGGTCTTTGCTGTGT-AG-C------------TGGCCT---CCCTGAACTATCTGCAC i mm10.chr11 C 0 I 1 s canFam3.chr9 15667118 406 - 61074082 TGGTTTCTATTAAC--TTTATATATAAAAAAC----TACCAGGTACTTC---CACCACCCTAGGACTCCAGAAGCCATGCAAGGAGTAAAATGGAC-ACGACAGAGAAGGCCATGATTAAGTGAGTGACATGATCCCGGGGACAGAACTTTGAAAGGAAGATTCAGTCAGTTGATAGACACTTAGTGAGCACTTACCACAAGCACCATGCACAGGTGTGGTGGGGGTGGCACGAGGTACTCGGGGGTCTGA-GGGGCTCCA-CTGGCAGTACACACTAGGGACtgtgt--gtgtgtgtgtgtgtgtatgtgtgtACACGCGTACCCACGTGTATGCAC--AGAGGGCAGGGTCAGTGCTGAAAGGAGGCTGATCTCTGCAAGAC-GGGCAGCCTTAGTGTACGATCTGCAAGCTACCTCACCA---- i canFam3.chr9 C 0 C 0 a score=1044519.000000 s hg38.chr17_GL383563v3_alt 184283 481 + 375691 CTGCTCTACCCCCCGCCTGAAATTCCTCT-GT--AAGTTTCATTCCCTTGGATTtagacctgtaagacacgaccgctgggagagaacaga----ctctgtcccagcccctca---tccattctactcatggggaaaccaacacctagagaggaaaaaggacttccaacgccaAGACTGTCCGGCCCAGGAGTCCCCCAGG---AAAACACCAGCCCTGTGGG--GGCTGGGCCTGT-AAGCCCTGCTGATGA-GGTCACGTTG----------GGCCACCTCcatggtcatggcagccactaggggcagggtcaaggggtcagggttaggAGTACAGTCACACAGACGTGACCTGGTCATGCCCCTGCCTCCCACTGGCCAGGTGCAAAGGTCAGGGAGTGAAGTGAGCTGGACATGAGGGCCcttcc------------------cttctg---------------------agagaagcatgcccatttttcttgcaacaggcacccctat--tggtctgtc-------ttctttc-----ttttcacagggatgtgaa s panTro4.chr17 170319 486 + 82630442 CTGCTCTACCCCCCGCCTGGAATTCCTCC-GT--AAGTTTCATTCCCTTCGATTtagacctgtaagacatgaccgctgggagagaacaga----ctctgtcccagcccctca---tccattctactcatggggaaaccaacacctagagaggaaaaaggacttccaacgccaAGACTGTCCGGCCCAGGAGTCCCCCAGG---AAAACACCAGCCCTGTGGG--GGCTGGGCCTGT-AAGCCCTGCTGATGA-GGTCACGTTG----------GGCCACCTCCATGATCACGGCAGCCACTAGGGGCAGGGCCAAGGGGTCAGGGTTAGGAGTACAGTCACACAGACATGACCTGGTCATGCCCCTGCCTTCCACTGGCCAGGTGCAAAGGTCAGGGAGTGAAGTGAGCTGGACATGAGGGCCcttcc------------------cttctg---------------------agagaagcatgcccatttttcttgcaacaggcatccctgt--tggtctgtcttc--tattctttc-----ttttcacagggacgtgaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 132305 485 - 81552678 CTGCCCTACCCCCtgcctggaattcctcc-gt--aagtttcattcctttggatttagacctgtaagacatgaccgctgggagagaacaga----ctctgtcccagcccctca---tccattctactcacggggaaaccaacacctagagaggaaaaagggcttccaacgccaAGACTGTCCAGCCCAGGAGCCCCCCAGA---AAAACACCAGCCCTGTAGG--GGCTGGGCCTGTAAAGCCCTGCTGATGAGGGTCACGTTG----------GGCCACCTCCATGCTCACAGCAGCCACTAGGGGCAGGGTCAAGGGGTCAGGGTT---AGTACAGACACACAGACATGACCTGGTCAGGCCCCTGCCTTCCACTGGCCAGGCGCAAAGGTCAGGGAGTGAAGTGAGCTGGACATGAGGGCCCTTCC------------------CTTCTG---------------------AGATAAGCATAcccatttttcttgcaacaggcgtccctgt--tggtctgtcttc--tattctctc-----ttttcacagggacgtgaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 94702 475 + 80904711 CTGCTCTACCAGCTGCCTGGAATTCCTCC-GT--AAGCTTCATTCCCTTGGATTCagacctgtaagacgtgaacgctgggagagaacaga----ctctgtcccagcccctca---tccagtctactcgtgggggaaccaatacccagagaggaaaaagggcttccaacgccaAGACTGTCCAGCCCAGGAGTCCCCCAG----AAAACACCTGCCCTGCAGG--GGCTGGGACCGT-AAGCCCTGCTGAAAA---------------------AGCCGCCGCCATGATCACAGCAGCCACGAGGGGCAGGGTCAAGGGGTCAGGGTTAGGAGAACAGACACACAGACGTGACCTGGTCAGGCCCCTGCCTTCCACGGGCCAGGTGCGAAGGTCAGGGAGTGACGTGAGCCGGACACGAGGACCCTTCC------------------CTTCTG---------------------AGAGAAGCAGGCCCATTTTTCTTGCAACAGGTGTCCCTGT--TGGTTTATCTTC--TTTTCTCTC-----TTTTCATAGGGACGTGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95063 475 + 80997621 CTGCTCTACCAGCTGCCTGGAATTCCTCC-GT--AAGCTTCATTCCCTTGGATTCagacctgtaagacgtgaacgctgggagagaacaga----ctctgtcccagcccctca---tccagtctactcgtgggggaaccaacacccagagaggaaaaagggcttccaacgccaAGACTGTCCAGCCCAGGAGTCCCCCAG----AAAACACCTGCCCTGCAGG--GGCTGGGACCGT-AAGCCCTGCTGAAAA---------------------AGCCGCCGCCATGATCACAGCAGCCACGAGGGGCAGGGTCAAGGGGTCAGGGTTAGGAGAACAGACACATAGACTTGACCTGGTCAGGCCCCTGCCTTCCACGGGCCAGGTGCGAAGGTCAGGGAGTGACGTGAGCCGGACACGAGGACCCTTCC------------------CTTCTG---------------------AGAGAAGCAGGcccatttttcttgcaacaggtgtccctgt--tggtttatcttc--ttttctctc-----ttttcatagggacgtgtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 102731 475 + 74645514 CTGCTCTACCACCTGCCTGGAATTCCTTG-GT--AAGCTTCATTCCCTTGGATTCAGACCTGTAAGACGTGAACGCTGGGAGAGAAGAGA----CTCTGTCCCAGCCCCTCA---TCCAGTCTACTTGTGGGGGAACCAACACCCAGAGAGGAAAAAGGACTTCCAACACCAAGACTGTCCAGCCCAGGAGTCCCCCAG----AAAACACCTGCCCTGCAGG--GGCTGGGACCGT-AAGCCCTGCTGAAAA---------------------AGCTGCCGCCATGATCACAGCAGCCACAAGGGGCAGGGTCAAGGGGTCAGGGTTAggagaacagacacacagacgtGACCTGGTCAGGCCCCTGCCTTCCACGGGCCAGGTGCGAAGGTCAGGGAGTGACGTGAGCCGGACATGAGGACCCTTCC------------------CTTCTG---------------------AGAGAAGCACGCCCATTTTTCTTGCAACAGGTGTCCCTGT--TGGTCTatcttc--tgttctctc-----ttttcaTAGGGACGTGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 97959 474 + 75148670 CTGCTCTACCACCTGCCTGGAATTCCTCC-GT--AAGCTTCATTCCCTTGGATTCagacctgtaagacgtgaacgctgggagagaacaga----ctctgtcccagcccctca---tccagtctactcgtgggggaaccaacacccagagaggaaaagggacttccaacgccaagactgtccagcCCAGGAGTCCCCCAG----AAAACACTTGCCCTGCAGG--GGCTGGGACTGT-AAACCCTGCTGAAAA---------------------AGCCACCGCCATGATCACAGCAGCCACTA-GGGCAGGGTCAAGGGGTCAGGGTTAGGAGAACAGACACACAGACGTGACCTGCTCAGGCCCCTGCCTTCCACGGGCCAGGTGCGAAGGTCAGAGAGTGACGTGAGCCGGACACGAGGACCCTTCC------------------CGTCTG---------------------AGAGAAGCATGcccatttttcttgcaacaggtgtccctgt--tggtctatcttc--tattctctc-----ttttcatagggacgtgtg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 908540 450 - 1291538 CTGACCTACCACTAGCCTGGAATTCCTCC--------------TCCCTTGGGTGTAGACCTGTAAGACATGAGCGCTGGGAGAGAACAGA----CTCCGACCCAGCCCCTCA---TCCAGCCTACTCATGGGGAAACCAACGCCCAGAGAGGAACACAGACTTAAAACGCCAAGGCATTCCTGCCCAGGAGCCCCCGTG-----AAACACTGGCTCT-----------------GT-ACGCCCTGCTGGTAA-GGTCATGCTG----------GGCCACCTC--TGACCACAGCAGCCACTG-GGGCGGAGTCAATGGGGCAGGGTCAGGAGGACAGACACACAGTTGGGACCCAGTC-GACCCCTGCCTTCCA-TGGCCAGGTGCGAAAGTCAGGGAGTGAAGTGAGCTGGACACGGGAGCCGTTCC--------------CGTTCCTCCG---------------------AGGGAGGCACGCCCG-------TGCAGCCAgtgtccctgc--tggtctatcttc--taccctcac-----ttttcacaggaacatgaa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75844758 413 + 122082543 TTGCTCTGCTACCTGTTCAAAATTCCTCT-GTTGGGGCTCCATCCTT---------GAACTCCAAGATAGGATGACTGGGAGAAAAAGGACACTCACTGTTCCAGCCCCTCC---CCTGTCACCCTCATGGGAT----------------GGGAACACACCATTCCACAACAAGGCTTTCTTTCCTCGGAGCCCCAAAGGCCCCAAGAGCTGTGTCTTCAGGCCAGCTGGGG-----GAGCCCAGCCTGGAA-AGCCAGGGAGGTGGCTATGTGGTCTCCTC--TGCTCACAGCAGGCAC-AGGGCCA---CTAATAGGCAAGGG-------------------------------------CCCTGCCTTCTAC---------------GACAGCGAGCTAGGTGGCCT--ACATGAGGAGCC--CC----------------------------------------------AGGAAGTCTGCTCATTTTTCTTGCAACAAATAGCCTCTCCATAGCCATTCTTCTGTGTTCTCTC-----TTTTCAGAGAGATGTGGA i mm10.chr11 I 1 C 0 s canFam3.chr9 15667524 404 - 61074082 -----------CCTGCCAGAAATTTCTCCAGA--AAGTTTCCTTCCCTTGGATTtggaaccgtaagatatgaaagctggaagagaacaga----ctctgtcctggctccctggtctccatcctattcttggggcaaccagagtccagagagaaggaaggacttcca-------------------------------------aaaactcatttccc--------------------tagcct------------------------------------------------------------------------gggatcaggactaggagtgggaATGCACAGATGTGATACGATCAGG--CCTGTCCTTGGCTGGTCA-----AAGGGTCAGTGGGTGACGTGGGCTGGATATGATATTTATTTTGATATACTTATTATGATATTTCTGGATATGAGTAGTGatttccacagagaagtgtgtccacttttgttgcaacagatgctcccac--tggtctaattcc--tattgttcctcttttttttataaagattttaa i canFam3.chr9 C 0 I 301 e ponAbe2.chr17 67655 625 + 73212453 I a score=200668.000000 s hg38.chr17_GL383563v3_alt 184764 87 + 375691 acaagaacggtttca--------------------------------------------------------------------------ctttcttcttaaaaacactgcaacggtgatgctgaaagggtgtcagagacaacagggccgggtggggactgc s panTro4.chr17 170805 87 + 82630442 acaagaacggtttca--------------------------------------------------------------------------ctttcttcttaaaaacactgcaacggtgatgctgaaagggtgtcagagacaatagggccaggtggggactgc i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 132790 87 - 81552678 acaagaacagtttcc--------------------------------------------------------------------------ctttcttcttaAAAACACTGCAATAGTGATGCTGAAAGGGTATCAGAGACAATAGGGCTGGGTGGGGACTGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 95177 87 + 80904711 ACAAGAACGGTTTCC--------------------------------------------------------------------------CTTTCTTCTTAAAAACACTGCAACGGAGACGCTGAAAAGGTGTCAGAGATAATAGGGCCAGGTGGAGACTGT i rheMac3.chr16 C 0 I 2 s macFas5.chr16 95538 87 + 80997621 acaagaacggtttcc--------------------------------------------------------------------------ctttcttcttaAAAACACTGCAACGGAGACGCTGAAAGGGTGTCAGAGATAATAGGGCCAGGTGGAGACTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103206 87 + 74645514 ACAAGAACGGTTTCC--------------------------------------------------------------------------CTTTCTTCTTAAAAACACTGCAACGGAGATGCTGAAAGGGTGTCAGAAATAATAGGGCCAGGTGGAGACTGT i papAnu2.chr16 C 0 I 2 s chlSab2.chr16 98433 87 + 75148670 acaagaacggtttcc--------------------------------------------------------------------------ctttcttcttaAAAACACTGCAACGGAGACGCTGAAAGGGTGTCAGAGATAACAGGGCCAGGTGGAGACTGC i chlSab2.chr16 C 0 I 2 s calJac3.chrUn_GL286409 908990 87 - 1291538 acaagaatgatttct--------------------------------------------------------------------------ctttcttcttaaaaacactgcaacggtgatgctggaagaatgtcagaggcaataaggcagggtggggactgc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75845171 160 + 122082543 CCAGGAGAACTttcctttgtgatgtgtggatggaagcttgggtctggtgcatgcaaggtaagcagccgaccactgtgttgtgcccagATCTCCCTTCTTAGTAATCACAT-ACAGCAACACTGAAAGACTGCGGGagacaacagggaaggctggggactgt i mm10.chr11 C 0 C 0 e canFam3.chr9 15667928 301 - 61074082 I e ponAbe2.chr17 67655 625 + 73212453 I a score=9112.000000 s hg38.chr17_GL383563v3_alt 184851 16 + 375691 agcaaaccacagaatg s panTro4.chr17 170892 16 + 82630442 agcaaaccacagaatg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 132877 16 - 81552678 AGCGAACCACAGAATG i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 909077 16 - 1291538 agccagcccgagaacg i calJac3.chrUn_GL286409 C 0 I 81 s mm10.chr11 75845331 16 + 122082543 ggcaaaccagaggaca i mm10.chr11 C 0 C 0 e canFam3.chr9 15667928 301 - 61074082 I e chlSab2.chr16 98520 2 + 75148670 I e papAnu2.chr16 103293 2 + 74645514 I e rheMac3.chr16 95264 2 + 80904711 I e macFas5.chr16 95625 0 + 80997621 C e ponAbe2.chr17 67655 625 + 73212453 I a score=-954.000000 s hg38.chr17_GL383563v3_alt 184867 2 + 375691 ------ca---- s panTro4.chr17 170908 2 + 82630442 ------ca---- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 132893 2 - 81552678 ------CA---- i nomLeu3.chr19 C 0 I 33 s mm10.chr11 75845347 12 + 122082543 ctccatcagtga i mm10.chr11 C 0 C 0 e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e chlSab2.chr16 98520 2 + 75148670 I e papAnu2.chr16 103293 2 + 74645514 I e rheMac3.chr16 95264 2 + 80904711 I e macFas5.chr16 95625 0 + 80997621 C e ponAbe2.chr17 67655 625 + 73212453 I a score=-23.000000 s hg38.chr17_GL383563v3_alt 184869 2 + 375691 AC s mm10.chr11 75845359 2 + 122082543 aa i mm10.chr11 C 0 C 0 e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e chlSab2.chr16 98520 2 + 75148670 I e papAnu2.chr16 103293 2 + 74645514 I e rheMac3.chr16 95264 2 + 80904711 I e macFas5.chr16 95625 0 + 80997621 C e nomLeu3.chr19 132895 33 - 81552678 I e ponAbe2.chr17 67655 625 + 73212453 I e panTro4.chr17 170910 0 + 82630442 C a score=1476.000000 s hg38.chr17_GL383563v3_alt 184871 2 + 375691 CG s rheMac3.chr16 95266 2 + 80904711 CG i rheMac3.chr16 I 2 C 0 s papAnu2.chr16 103295 2 + 74645514 TG i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 98522 2 + 75148670 CG i chlSab2.chr16 I 2 C 0 s mm10.chr11 75845361 2 + 122082543 cg i mm10.chr11 C 0 C 0 e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e macFas5.chr16 95625 0 + 80997621 C e nomLeu3.chr19 132895 33 - 81552678 I e ponAbe2.chr17 67655 625 + 73212453 I e panTro4.chr17 170910 0 + 82630442 C a score=13780.000000 s hg38.chr17_GL383563v3_alt 184873 13 + 375691 GGGAGCGGCTACT s ponAbe2.chr17 68280 13 + 73212453 GGGAGCGGCTACT i ponAbe2.chr17 I 625 C 0 s rheMac3.chr16 95268 13 + 80904711 GGGAGTGGCTACT i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 103297 13 + 74645514 GGGAGCAGCCACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98524 13 + 75148670 GGGAGCGGCCACT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75845363 13 + 122082543 ggaagccactgct i mm10.chr11 C 0 I 2 e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e macFas5.chr16 95625 0 + 80997621 C e nomLeu3.chr19 132895 33 - 81552678 I e panTro4.chr17 170910 0 + 82630442 C a score=7800.000000 s hg38.chr17_GL383563v3_alt 184886 15 + 375691 TCCCCTGACCAACT----T s ponAbe2.chr17 68293 15 + 73212453 CACCCTGACCGACT----T i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 95281 15 + 80904711 TACCGTGACCAACC----T i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 103310 19 + 74645514 GACCCTGACCAACCAACTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98537 15 + 75148670 GACCCTGACCAACC----T i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e macFas5.chr16 95625 0 + 80997621 C e nomLeu3.chr19 132895 33 - 81552678 I e panTro4.chr17 170910 0 + 82630442 C a score=-2159.000000 s hg38.chr17_GL383563v3_alt 184901 5 + 375691 CCCT--G s ponAbe2.chr17 68308 5 + 73212453 CCCG--G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132928 5 - 81552678 CCCT--G i nomLeu3.chr19 I 33 C 0 s rheMac3.chr16 95296 4 + 80904711 CCCC--- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 103329 6 + 74645514 CCCCTG- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98552 4 + 75148670 CCCG--- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e macFas5.chr16 95625 0 + 80997621 C e panTro4.chr17 170910 0 + 82630442 C a score=39663.000000 s hg38.chr17_GL383563v3_alt 184906 37 + 375691 AGCAGGGAGCGGCTACTTACCCTGACCAACT----TCCCT---G s ponAbe2.chr17 68313 37 + 73212453 AGCGGGGAGCGGCTACTCACCCTGACCGACT----TCCCG---G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132933 35 - 81552678 AGCGGGGAGCGGCTACTT-CCCTGA-CAACT----TCCTC---C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 95300 36 + 80904711 AGCGGGGAGCGGCCACTGACCCTGACCAACC----TCCCG---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95625 36 + 80997621 AGCAGGGAGTGGCTACTTACCGTGACCAACC----TCCCC---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103335 37 + 74645514 AGCGGGGAGCGGCCACTGACCCTGACCAACC----TCCCCC--- i papAnu2.chr16 C 0 T 79 s chlSab2.chr16 98556 42 + 75148670 AGCGGGGAGCGGCCACTGACCCTGACCAACCAACTTCCCC-CG- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e panTro4.chr17 170910 0 + 82630442 C a score=14438.000000 s hg38.chr17_GL383563v3_alt 184943 9 + 375691 AGCAGGGAG s ponAbe2.chr17 68350 9 + 73212453 AGCGGGGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132968 9 - 81552678 AGCGGGGAG i nomLeu3.chr19 C 0 T 84 s rheMac3.chr16 95336 9 + 80904711 AGAGGGCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95661 9 + 80997621 AGCGGGGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103293 9 + 74645514 AGTGGGGAG i papAnu2.chr16 T 79 C 0 s chlSab2.chr16 98598 9 + 75148670 AGCGGGGAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e panTro4.chr17 170910 0 + 82630442 C a score=22711.000000 s hg38.chr17_GL383563v3_alt 184952 23 + 375691 CGGCTACTTACCCTGACCAACTT--- s ponAbe2.chr17 68359 23 + 73212453 CGGCTACTCACCCTGACCGACTT--- i ponAbe2.chr17 C 0 I 296 s rheMac3.chr16 95345 26 + 80904711 CGGCCACTGACCCTGACCAACCAACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95670 25 + 80997621 CGGCCACTGACCCTGACCAACCAAC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103302 26 + 74645514 CAGCCACTGACCCTGACCAACCAACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98607 26 + 75148670 CGGCCACTGACCCTGACCAACCAACT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e nomLeu3.chr19 132977 84 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=1426.000000 s hg38.chr17_GL383563v3_alt 184975 2 + 375691 TC s rheMac3.chr16 95371 2 + 80904711 TC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95695 1 + 80997621 -C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103328 2 + 74645514 TC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98633 2 + 75148670 TC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e nomLeu3.chr19 132977 84 - 81552678 T e ponAbe2.chr17 68382 296 + 73212453 I e panTro4.chr17 170910 0 + 82630442 C a score=3190.000000 s hg38.chr17_GL383563v3_alt 184977 3 + 375691 CCC s ponAbe2.chr17 68678 3 + 73212453 CCT i ponAbe2.chr17 I 296 C 0 s rheMac3.chr16 95373 3 + 80904711 CCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95696 3 + 80997621 TCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103330 3 + 74645514 CCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98635 3 + 75148670 CCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e nomLeu3.chr19 132977 84 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=1055.000000 s hg38.chr17_GL383563v3_alt 184980 2 + 375691 CA s ponAbe2.chr17 68681 2 + 73212453 CT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132893 2 - 81552678 CA i nomLeu3.chr19 T 84 C 0 s rheMac3.chr16 95376 2 + 80904711 CG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95699 2 + 80997621 CG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103333 2 + 74645514 TG i papAnu2.chr16 C 0 T 42 s chlSab2.chr16 98638 2 + 75148670 CG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e panTro4.chr17 170910 0 + 82630442 C a score=55073.000000 s hg38.chr17_GL383563v3_alt 184982 32 + 375691 AGCGGGGAGCGGCTACTTACCCTGACCAACTT s ponAbe2.chr17 68683 32 + 73212453 AGCGGGGAGCGGCTACTCACCCTGACCAACTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132895 32 - 81552678 AGCGGGGAGCGGCTACTTACCCTGATCAACTT i nomLeu3.chr19 C 0 T 34 s rheMac3.chr16 95378 32 + 80904711 AGCGGGGAGCGGCTACTTACCCTGACCAACCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95701 32 + 80997621 AGCGGGGAGCGGCTACTTACCCTGACCAACCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103293 32 + 74645514 AGTGGGGAGCAGCCACTGACCCTGACCAACCA i papAnu2.chr16 T 42 C 0 s chlSab2.chr16 98640 32 + 75148670 AGCGGGGAGCGGCCACTGACCCTGACCAACCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e panTro4.chr17 170910 0 + 82630442 C a score=-2024.000000 s hg38.chr17_GL383563v3_alt 185014 5 + 375691 CCCTG- s ponAbe2.chr17 68715 5 + 73212453 CCCCG- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 95410 4 + 80904711 -CCTG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95733 5 + 80997621 -ACTTC i macFas5.chr16 C 0 T 113 s papAnu2.chr16 103325 5 + 74645514 -ACTTC i papAnu2.chr16 C 0 I 5 s chlSab2.chr16 98672 4 + 75148670 -CCCG- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=43044.000000 s hg38.chr17_GL383563v3_alt 185019 46 + 375691 AGCAGGGAGCGGCTACTTACCCTGACCAAC---TTCCCCG--AGCAGGGAG s ponAbe2.chr17 68720 46 + 73212453 AGCGGGGAGCGGCTACTCACCCTGACCGAC---TTCCCGG--AGCGGGGAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 95414 51 + 80904711 AGTGGGCAGCAGCCACTGACCCTGACCAACCAACTCCCCCTGAGCGGGGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95625 45 + 80997621 AGCAGGGAGTGGCTACTTACCGTGACCAAC---CTCCCC---AGCGGGGAG i macFas5.chr16 T 113 C 0 s papAnu2.chr16 103335 46 + 74645514 AGCGGGGAGCGGCCACTGACCCTGACCAAC---CTCCCCC--AGCAGGGAG i papAnu2.chr16 I 5 T 79 s chlSab2.chr16 98676 51 + 75148670 AGCGGGCAGCGGCCACTGACCCTGACCAACCAACTTCCCCCGAGCGGGGAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=35064.000000 s hg38.chr17_GL383563v3_alt 185065 37 + 375691 CGGCTACTTACCCTGACCAAC-----TTCCCCGAGCAGGGAG s ponAbe2.chr17 68766 37 + 73212453 CGGCTACTCACCCTGACCGAC-----TTCCTCTAGCGGGGAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 95465 37 + 80904711 CGGCCACTGACCCTGACCAAC-----GTCCCCCAGCAGGGAG i rheMac3.chr16 C 0 T 238 s macFas5.chr16 95670 40 + 80997621 CGGCCACTGACCCTGACCAACCAA--CCTCCCGAGCGGGGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103302 42 + 74645514 CAGCCACTGACCCTGACCAACCAACTTCCCCTGAGCGGGGAG i papAnu2.chr16 T 79 C 0 s chlSab2.chr16 98727 36 + 75148670 CGGCCACTGACCCTGACCAA------CCTCCTGAGCGGGGAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=27052.000000 s hg38.chr17_GL383563v3_alt 185102 37 + 375691 CGGCTACTTACCCTGACCAACT-----TCCCCGAGCAGGGAG s ponAbe2.chr17 68803 37 + 73212453 CGGCTACTCACCCTGACCGACT-----TCCCCGAGCGGGGAG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 95710 42 + 80997621 CGGCTACTTACCCTGACCAACCAACTTCCCCCGAGTGGGGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103344 37 + 74645514 CGGCCACTGACCCTGACCAACC-----TCCCCCAGCAGGGAG i papAnu2.chr16 C 0 T 84 s chlSab2.chr16 98763 37 + 75148670 CGGCCACTGACCCTGACCAACC-----TCCCCCAGCAGGGAG i chlSab2.chr16 C 0 T 280 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e rheMac3.chr16 95502 238 + 80904711 T e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=5328.000000 s hg38.chr17_GL383563v3_alt 185139 23 + 375691 CGGCTACTTACCCTGACCAACTT s ponAbe2.chr17 68840 23 + 73212453 CGGCTACTCACCCTGACCGACTT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 95752 23 + 80997621 CGGCCACTGACCCTGACCAACCT i macFas5.chr16 C 0 T 37 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e chlSab2.chr16 98800 280 + 75148670 T e papAnu2.chr16 103381 84 + 74645514 T e rheMac3.chr16 95502 238 + 80904711 T e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=1887.000000 s hg38.chr17_GL383563v3_alt 185162 9 + 375691 CCCCGAACA s ponAbe2.chr17 68863 9 + 73212453 CCCCGAGCG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 95738 9 + 80997621 CCCCGAGTG i macFas5.chr16 T 37 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e chlSab2.chr16 98800 280 + 75148670 T e papAnu2.chr16 103381 84 + 74645514 T e rheMac3.chr16 95502 238 + 80904711 T e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=10684.000000 s hg38.chr17_GL383563v3_alt 185171 33 + 375691 GGGAGCGGCTACTTACCCTGACCAACT----TCCCTG- s ponAbe2.chr17 68872 33 + 73212453 GGGAGCGGCTACTCACCCTGACCGACT----TCCTCT- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 95747 32 + 80997621 GGGAGCGGCCACTGACCCTGACCAACC----TCCCG-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103297 38 + 74645514 GGGAGCAGCCACTGACCCTGACCAACCAACTTCCCCTG i papAnu2.chr16 T 84 T 42 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e chlSab2.chr16 98800 280 + 75148670 T e rheMac3.chr16 95502 238 + 80904711 T e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=29173.000000 s hg38.chr17_GL383563v3_alt 185204 74 + 375691 AGCAGGGAGCGGCTACTTACCCTGACCAAC-----TTCCCTGAGCAGGGAGCGGCTACTTACCCTGACCAACTTCCCT-G s ponAbe2.chr17 68905 74 + 73212453 AGCGGGGAGCGGCTACTCACCCTGACCGAC-----TTCCCCGAGCGGGGAGCGGCTACTCACCCTGACCGACTTCCCC-G i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 95779 78 + 80997621 AGAGGGCAGCGGCCACTGACCCTGACCAACCAACTTCCCCCGAGCGGGGAGCGGCTACTTACCCTGACCAACCTCCCG-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103293 79 + 74645514 AGTGGGGAGCAGCCACTGACCCTGACCAACCAACTTCCCCTGAGCGGGGAGCGGCCACTGACCCTGACCAACCTCCCCC- i papAnu2.chr16 T 42 T 79 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e chlSab2.chr16 98800 280 + 75148670 T e rheMac3.chr16 95502 238 + 80904711 T e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=20479.000000 s hg38.chr17_GL383563v3_alt 185278 35 + 375691 AGCAGGGAGCGGCTACTTACCCTGACCAACTTTCC s ponAbe2.chr17 68979 33 + 73212453 AGCGGGGAGCGGCTACTCACCCTGACCGACTT--C i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 95857 35 + 80997621 AGTGGGCAGCGGCCACTGACCCTGACCAACCAACT i macFas5.chr16 C 0 T 117 s papAnu2.chr16 103293 35 + 74645514 AGTGGGGAGCAGCCACTGACCCTGACCAACCAACT i papAnu2.chr16 T 79 I 3 s chlSab2.chr16 98520 32 + 75148670 AGCGGGGAGCGGCCACTGACCCTGACCAACCT--- i chlSab2.chr16 T 280 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e rheMac3.chr16 95502 238 + 80904711 T e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=1476.000000 s hg38.chr17_GL383563v3_alt 185313 2 + 375691 CC s ponAbe2.chr17 69012 2 + 73212453 CT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 95775 2 + 80997621 CC i macFas5.chr16 T 117 C 0 s papAnu2.chr16 103331 2 + 74645514 CC i papAnu2.chr16 I 3 C 0 s chlSab2.chr16 98552 2 + 75148670 CC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e rheMac3.chr16 95502 238 + 80904711 T e nomLeu3.chr19 132927 34 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=462.000000 s hg38.chr17_GL383563v3_alt 185315 2 + 375691 CA s ponAbe2.chr17 69014 2 + 73212453 CT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132893 2 - 81552678 CA i nomLeu3.chr19 T 34 C 0 s macFas5.chr16 95777 2 + 80997621 CG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103333 2 + 74645514 TG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98554 2 + 75148670 CG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e rheMac3.chr16 95502 238 + 80904711 T e panTro4.chr17 170910 0 + 82630442 C a score=66403.000000 s hg38.chr17_GL383563v3_alt 185317 46 + 375691 AGCGGGGAGCGGCTACTTACCCTGACCAACT-----TCCCC-GAGCAGGGAG s ponAbe2.chr17 69016 46 + 73212453 AGCGGGGAGCGGCTACTCACCCTGACCGACT-----TCCCC-GAGCGGGGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132895 47 - 81552678 AGCGGGGAGCGGCTACTTACCCTGATCAACT-----TCCCCTGAGCGGGGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 95264 45 + 80904711 AGCGGGGAGTGGCTACTTACCGTGACCAAC------CTCCC-CAGCGGGGAG i rheMac3.chr16 T 238 C 0 s macFas5.chr16 95779 51 + 80997621 AGAGGGCAGCGGCCACTGACCCTGACCAACCAACTTCCCCC-GAGCGGGGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103335 46 + 74645514 AGCGGGGAGCGGCCACTGACCCTGACCAACC-----TCCCC-CAGCAGGGAG i papAnu2.chr16 C 0 T 79 s chlSab2.chr16 98556 51 + 75148670 AGCGGGGAGCGGCCACTGACCCTGACCAACCAACTTCCCCC-GAGCGGGGAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e panTro4.chr17 170910 0 + 82630442 C a score=40959.000000 s hg38.chr17_GL383563v3_alt 185363 37 + 375691 CGGCTACTTACCCTGACCAAC-----TTCCCTGAGCAGGGAG s ponAbe2.chr17 69062 37 + 73212453 CGGCTACTCACCCTGACCGAC-----TTCCTCTAGCGAGGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132942 35 - 81552678 CGGCTACTT-CCCTGA-CAAC-----TTCCTCCAGCGGGGAG i nomLeu3.chr19 C 0 T 82 s rheMac3.chr16 95309 36 + 80904711 CGGCCACTGACCCTGACCAAC------CTCCCGAGAGGGCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95830 36 + 80997621 CGGCTACTTACCCTGACCAAC------CTCCCGAGTGGGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103302 42 + 74645514 CAGCCACTGACCCTGACCAACCAACTTCCCCTGAGCGGGGAG i papAnu2.chr16 T 79 C 0 s chlSab2.chr16 98607 42 + 75148670 CGGCCACTGACCCTGACCAACCAACTTCCCCCGAGCGGGGAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e panTro4.chr17 170910 0 + 82630442 C a score=37963.000000 s hg38.chr17_GL383563v3_alt 185400 37 + 375691 CGGCTACTTACCCTGACCAACT-----TCCCCGAGCAGGGAG s ponAbe2.chr17 69099 37 + 73212453 CGGCTACTCACCCTGACCAACT-----TCCCGGAGCGGGGAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 95345 42 + 80904711 CGGCCACTGACCCTGACCAACCAACTTCCCCCGAGCGGGGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95866 42 + 80997621 CGGCCACTGACCCTGACCAACCAACTCCCCCTGAGCGGGGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103344 37 + 74645514 CGGCCACTGACCCTGACCAACC-----TCCCCCAGCAGGGAG i papAnu2.chr16 C 0 T 88 s chlSab2.chr16 98649 36 + 75148670 CGGCCACTGACCCTGACCAACC------TCCCGAGCGGGCAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e nomLeu3.chr19 132977 82 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=14832.000000 s hg38.chr17_GL383563v3_alt 185437 28 + 375691 CGGCTACTTACCCTGACCAAC------TTCCCCG s ponAbe2.chr17 69136 28 + 73212453 CGGCTACTCACCCTGACCAAC------TTCCTCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 95387 27 + 80904711 CGGCTACTTACCCTGACCAAC------CTCCTG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95908 27 + 80997621 CGGCCACTGACCCTGACCAAC------GTCCCG- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 98685 33 + 75148670 CGGCCACTGACCCTGACCAACCAACTTCCCCCG- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I e papAnu2.chr16 103381 88 + 74645514 T e nomLeu3.chr19 132977 82 - 81552678 T e panTro4.chr17 170910 0 + 82630442 C a score=63328.000000 s hg38.chr17_GL383563v3_alt 185465 36 + 375691 AGCAGGGAGCGGCTACTTACCCTGACCAAC-----TT-CCCT s panTro4.chr17 170910 36 + 82630442 agcggggagcggctacttaccctgaccaac-----tt-ccct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69164 36 + 73212453 AGCGGGGAGCGGCTACTCACCCTGACCAAC-----TT-CCCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132895 37 - 81552678 AGCGGGGAGCGGCTACTTACCCTGATCAAC-----TTCCCCT i nomLeu3.chr19 T 82 C 0 s rheMac3.chr16 95414 41 + 80904711 AGTGGGCAGCAGCCACTGACCCTGACCAACCAACTCC-CCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95935 35 + 80997621 AGCGGGCAGCGGCCACTGACCCTGACCAA------CC-TCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103293 41 + 74645514 AGTGGGGAGCAGCCACTGACCCTGACCAACCAACTTC-CCCT i papAnu2.chr16 T 88 C 0 s chlSab2.chr16 98718 35 + 75148670 AGCGGGGAGCGGCCACTGACCCTGACCAA------CC-TCCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I e canFam3.chr9 15667928 301 - 61074082 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I a score=35452.000000 s hg38.chr17_GL383563v3_alt 185501 12 + 375691 GAGCAGGGAGCG s panTro4.chr17 170946 12 + 82630442 gagcggggagcg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69200 12 + 73212453 GAGCGGGGAGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132932 12 - 81552678 GAGCGGGGAGCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 95455 12 + 80904711 GAGCGGGGAGCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95970 12 + 80997621 GAGCGGGGAGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103334 12 + 74645514 GAGCGGGGAGCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98753 12 + 75148670 GAGCGGGGAGCG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15668229 12 - 61074082 gagggggaagct i canFam3.chr9 I 301 C 0 e mm10.chr11 75845376 2 + 122082543 I e calJac3.chrUn_GL286409 909093 81 - 1291538 I a score=59713.000000 s hg38.chr17_GL383563v3_alt 185513 23 + 375691 GCTACTT-ACCCTGACCAACTTCC s panTro4.chr17 170958 23 + 82630442 gctactt-accctgactaacttcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69212 23 + 73212453 GCTACTC-ACCCTGACCAACTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132944 21 - 81552678 GCTACTT--CCCTGAC-AACTTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 95467 23 + 80904711 GCCACTG-ACCCTGACCAACGTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 95982 23 + 80997621 GCCACTG-ACCCTGACCAACGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 103346 23 + 74645514 GCCACTG-ACCCTGACCAACCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 98765 23 + 75148670 GCCACTG-ACCCTGACCAACCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 909174 23 - 1291538 gctactc-accctaaccagcttcc i calJac3.chrUn_GL286409 I 81 C 0 s canFam3.chr9 15668241 24 - 61074082 gctacttaagcctgttcaatttgt i canFam3.chr9 C 0 C 0 e mm10.chr11 75845376 2 + 122082543 I a score=2204477.000000 s hg38.chr17_GL383563v3_alt 185536 643 + 375691 CT-GAGCAGGGAG--GTATCGGAAGCCCTTCTGACTTCCACAAAGGAAGCCAGAGCTCC---AGTTTTT--TTAAAAATGAGAGTTCTCCACATTTAA-----ACTAGTTGACAATGAATTTTAAGCAGTAGGCCAGATTGAATCACT-GCTCCACCAGTCTGTGA-CCCAAAACACAGGCAAATGTGTGGTC-CCA-GAGGACAGACGGCA--------------------------------------------------CCCACCTCCTGACAGGGAGG-CTTCCTACTCCA-----TTCCGCCTCCTTCTGCAAGCTCCAGCCCC--CC-CGGCCCCGGTGTGTACAACACACACTCCCAGCTGCTCTGAAGGCTGTGGAGAATTCACGTACCGCGGCT-GGTATATGTGACA--GAAATGGCAAATCCAGAGTCTGCTAGCAAAATACGGGGGTGGGGAG---TGGGCTGGGGGTGAGGAGAAGGAGGCTG------------AGCTTCCAAAATGCAAATCTCTCAGGGACAGAGAGAGAAGGAAGGCGGCATAGCAGCAGCTGGCTCTGGGCGGTCAGCAATCCTATCTGAAAATAAAACATTTT-ACAATCCACAACTGCACCTCATTAAGAATGAATGGATCGGCTGGTATAAATAGCATGCCGCGTGAAGAAGTCAGGAAACAGCATATGCGTTTGACGGAAAAACGGCAGCCACAGGG-CTGCTTATT s panTro4.chr17 170981 643 + 82630442 cc-gagcagggag--gtatcggaagcccttctgacttccacaaaggaagccagagctcc---agttttt--ttaaaa-tgagagttctccacatttaa-----actagttgacagtgaattttaaGCAGTAGGCCAGATTGAATCACT-GCTCCACCAGTCTGTGA-CCCAAAACACAGGCAAATGTGTGGTC-CCA-GAGGACAGACGGCA--------------------------------------------------CCCACCTCCCGACAGGGAGA-CTTCCTACTCCA-----TTCCACCTCCTTCTGCAAGCTCCAGCCCC--CC-CGGCCCCGGTGTGTACAACACACACTCCCAGCTGCTCTGAAGGCTGTGGAGAATTCACATACCGCGGCT-GGTATATGTGACA--GAAATGGCAAATCCAGAGTCTGCTAGCAAAATACGGGGGTGGGGAG---TGGGCTGGGGGTGAGGAGAAGGAGGCTG------------AGCTTCCAAAATGCAAATCTTTCAGGGACAGAGAGAGAAGGAAGGCGGCATAGCAGCAGCTGGCTCTGGGCGGTCAGCAATCCTATCTGAAAATAAAACATTTTTACAATCCACAACTGCACCTCATTAAGAATGAATGGATCGGCTGGTATAAATAGCATGCCGCGTGAAGAAGTCAGGAAACAGCATATGCGTTTGACGGAAAAGTGGCAGCCACAGGG-CTGCTTATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69235 635 + 73212453 CC-GAGCGGGGAG--GTATCGGAAGCCCTTCTGACTTCCACAAAGGAAGCCAGGGCTCC---AATTTTT--AAAAAA-CGAGAGTTCTCCACATTTAA-----ACAAGTTGACAATGAATTTTAAGCAGTAGGCCAGATTGAATCACT-GCTCCACCAGTCTGTGA-CCCAAAACACAGGCAAATGTGTGGCC-CCG-GAGGACAGACGGCA--------------------------------------------------CCCACCTCCCAACATGGCGG-CTTCCTACTCCA-----TTCCGCCTC---CTGCAAGCTCCAG--CC--CC-CGGCCCCGGTGTGTACAACACACATTCCCAGCTGCTCTGAAGGCTGTGGAGAATTCACGTACCGCGGCT-GGTGTATGTGACA--GAAATGGCAAATCCAGAGTCTGCTAGCAAAATACGGGGGTGGGGAG---TGGGCTGGGGGTGAGGAGAAGGAGGCTG------------AGCTTCCAAAATGCAAATCTCTCAGGGAC--AGAGAGAAGGAAGGCGGCATAGCGGCAGCTGGCTCTGGGCAGTCAGCAATCCTATCTGAAAATAACACATTTT-ACAATCCACAACTGCACCTCATTAAGAATGAATGGATCGGCTGGTATAAATAGCAAGCCGTGTGAAGCAGTCAGGAAACAGCATATGCGTTTGACGGAAAAACGGCAGCCACAGGG-CTGCTTATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 132965 624 - 81552678 TC-CAGCGGGGAG--GTATC--------------CTTCCACAAAGGAAGCCAGAGCTCC---AATTTTT--AAAAAA-TGAGAGTTCTCCACATTTAA-----ACAAGTTGACAATGAATTTTAAGCAGTAGGCCAGATTGAATCACT-GCTCCACCAGTCTGTGA-CCCAAAACACAGGCCAATGTGTGGTC-CCC-GAGGACAGACGGCA--------------------------------------------------CCCACCTCCCGACACGGAGC-CTTCCTACTCCA-----TTCCGCCTC---CTGCAAGCTCCAG-CCC--CC-TGGCCCTGGTGCGTACAACACGCACTCCCAGCTGCTCGGAAGGCTGTGGAGAATTCACGTACCGCGACT-GGTCTCTGTGACA--GAAATGGCAAATCCAGAGTCTGCTAGCAAAATACGGGGGTGGGGAG---TGGGCTGGGGGTGAGGAGAAGGAGGCTG------------AGCTTCCAAAATGCAAATCTCTCAGCGACAGAGAGAGAAGGAAGGCAGCATAGCAGCAGCTGGCTCTGGGCAGTCAGCAATGCTCTCTGAAAATAAAACATTTT-ACAATCCACAACTGCACCTCATTAAGAATGAATGGATCGGCTGGTATAAATAGCACGCCGCGTGAAGAAGTCAGGAAACAGCATATGCGTTTGATGGAAAAACGGCAGCCACAAGG-CTGCTTATT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 95490 639 + 80904711 CC-CAGCAGGGAG--GTATCGGCAGACCTTCTGATTTCCCCAAAAGAAGCCAGAGCTCC---ATTTTCT--AAAAAA-TGAGAATTCTCCACATTTAA-----ACAAGTTGACAATGAGTTTTAAGCAGCAGGCCAGATTGAATCACC-GCTCCCCCAGTCTGTGG-CCCATAACACAGGC-AATGTCTGGTC-CCC-GAGGACAGACGGCA---------------------------------------------------CCACCTCCCGACAGGGAGGCCTTCCTACTCCG-----TTCTGCCTCCTCCTGCAAGCTCCAG--CC--CCATAGCCC-GGTGTGTACAACACACACTCCCAGCTGCTCTGCAGGCTGTGGGGAATTCACATACCGTGGCT-GGTATATGTGACA--GAAATGGCAAATCCAGAGTCTGCTAGCAAAATACTGGGGTGGGGAG---TGGGCTGGGGGTGAGGAGAGGGAGGCTG------------AGCTTTCAAAATGCAAATCTCTCAGGGACAGAGAGAGAAGGAAGGCAGTACAGCAGCAGCTGGCTCTGGACAGTGAGCAATCCTGTCTGAAAATAAAACATTCT-ACGATCCACAACTGCGCCTCATTAAGAATGAATGGCTGGGCTGGTATAAATAGCTCGCCACGTGAAGAAGTCAGGAAACAGCATATGCGTCTGATGGAAACACGGCAGCCACAGGG-CTGCTTATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96005 639 + 80997621 CC-CAGCAGGGAG--GTATCGGCAGACCTTCTGATTTCCCCAAAAGAAGCCAGAGCTCC---ATTTTCT--AAAAAA-TGAGAATTCTCCACATTTAA-----ACAAGTTGACAATGAGTTTTAAGCAGCAGGCCAGATTGAATCACC-GCTCCCCCAGTCTGTGG-CCCATAACACAGGC-AATGTCTGGTC-CCC-GAGGACAGACGGCA---------------------------------------------------CCACCTCCCGACAGGGAGGCCTTCCTACTCCG-----TTCTGCCTCCTCCTGCAAGCTCCAG--CC--CCATAGCCC-GGTGTGTACAACACACACTCCCAGCTGCTCTGCAGGCTGTGGGGAATTCACATACCGTGGCT-GGTATATGTGACA--GAAATGGCAAATCCAGAGTCTGCTAGCAAAATACTGGGGTGGGGAG---TGGGCTGGGGGTGAGGAGAGGGAGGCTG------------AGCTTTCAAAATGCAAATCTCTCAGGGACAGAGAGAGAAGGAAGGCAGTACAGCAGCAGCTGGCTCTGGGCAGTGAGCAATCCTGTCTGAAAATAAAACATTCT-ACAATCCACAACTGCGCCTCATTAAGAATGAATGGCTGGGCTGGTATAAATAGCTCGCCGCGTGAAGAAGTCAGGAAACAGCATATGCGTCTGATGGAAACACGGCAGCCACAGGG-CTGCTTATT i macFas5.chr16 C 0 I 3 s papAnu2.chr16 103369 634 + 74645514 CC-CAGCAGGGAG--GTATCGGCAGACCTTCTGATTTCCCCAAAAGAAGCCAGAGCTCC---ATTTTCT-aaaaaaa-TGAGAATTCTCCACATTTAA-----ACAAGTTGACAATGAGTTTTAAGCAGCAGGCCAGATTGAATCACC-GCTCCCCCAGTCTGTGA-CCCATAACACAGGC-AATGTCTGGTC-CCT-GAGGACAGACGGCA---------------------------------------------------CCACCTCCCGACACGGAGGCCTTCCTACTCCA-----TTCTGCCTCCTCCTGCAAGCTCCAG--CC--CC-CGGCCC-GATGTGTACAACACACACTCCCAGCTGCTCTGCAGGCTGCGGGGAATTCACGTACCGTGGCT-GGTGTATGTGACA-------GGCAAATCCAGAGTCTGCAAGCAAAAtactggggtggggag---tgggctgggagtgaggagagggaggctg------------agctttcaaaatgcaaatctctcagggacagagagagaaggaaggcagTACAGCAGCAGCTGGCTCTGGGCAGTGAGCAATCctgtctgaaaataaaacattct-acaAGCCACAACTGCGCCTCATTAAGAATGAATGGATCGGCTGGTATAAATAGCAGGCCGCGtgaagaagtcaggaaacagcatATGCGTCTGATGGAAACACGGCAGCCACAGGG-CTGCTTATT i papAnu2.chr16 C 0 I 4 s chlSab2.chr16 98788 633 + 75148670 CC-CAGCAGGGAG--GTATCCGCAGACCTTCTGATTTCCCCAAAAGAAGCCAGAGCTCC---ATTTTCT--AAAACA-TGAGAATTCTCCACATTTAA-----ACAAGTTGACAATGAGTTTTAAGCAGC-GGCCAGATTGAATCGCC-GCTCCCCCAGTCTGTGACCCCACAACACAGGC-AATGTCTGGTC-CCC-GAGGACAGACGGCA---------------------------------------------------CCTCCTCCCGACACGGAGGCCTTCCTACTCCA-----TTCTG---CCTCCTGCAAGCTCCAG--CC--CC-CGGCCC-GGTGTGTGCAACACACACTCCCAGCTGCTCTGCAGGCTGTGGGGAATTCACGTACCGTGGCT-GGTATGTGCGACA--GAAATGGCAAATCCACTGTCTGCTAGCAAAATACTGGGGTGGGGAG---TGGGCTGGGGGTGAGGAGAGGGAGGCTG------------AGCTTTCAAAATGCAAATCTCTCAGGGAC--AGAGAGAAGGAAGGCGGTACAGCAGCAGCTGGCTCTGGGCAGTGAGCAATCCTGTCTGAAAATAAAACATTCT-ACGATCCACAACTGTACCTCATTAGGAATGAATGGATCGGCTGGTATAAATAGCACGCCGCGTGAAGAAGTCAGGAAACAGCATATGCGTCTGATGGAAACACGGCAGCCACAGGG-CTGCTTATT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 909197 678 - 1291538 ccagagaggagag--gtattggcagaccttctgatttccaaaaaggaagccagagctcc---atttttt--acaaaa-taagaattttccatatttaa-----gcaagttgacgatgaattttaaGCAGTAGGTTGGACTGGATCA---------CCAGTCTGTGA-CCCGAAACACAGGCAAATGTTGGACCGCCT-TGGGATACACCCCAAGAAGGCGTTCCTACTCCACTCTGCCTCCTCTCCCCTACACAGAGCCTGCCTTCCCCCTCCACATGGAGGCCTCCCTACTCCA-----CTCTGCTTCCTTCGAC-AGCTCCAG--CC--CC-CGGCCCCACCGGGTACAACACACACTCCTGGCTGTTCTGAAGGCTGTGGGAAATTCAGGTACTGTGGCT-GGCCTATTTGACA--GAAATGGCAAATCCAGAGTCTGCCAGGAAAATACTGGGGTGGAGAG---TGG--CTGGGGTGAGGAGAGGGTAGCTG------------AGCTTCCAAAATGCGAATCTCTCAGGGGCAGAGAAAGGAAGAA-ACGAAACAGCGGCAGCAGGCTC-GGGCAGTGAGCAATCCTATCTGAAAATAAAACATTTT-ACAATCCACAACTGCACCTCATTA-GACTGAATGGATTGAGTGGTATAAATAGCATGCCTCGTGCAGAAGTCAGGAAACAGCCTATGTGTCTGACGGAGAAACAGCTG-CATGGGA-TGGCTTGTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75845378 607 + 122082543 -c-tgagagggcg--gtattggcagaccttctgatttttaagagagaagccagaactcc---attttCTTTTCAGAG-TGAGGGTTCTTTGCAGTTAAAAAACAAAAAGTGACAGTGAATTTTAAGCAGCCAGCCAGATCGGGTCACCTGCTTCACCAGATTGTGA-CCTATCA-ATAGGCAGAGTCTCAGCC-CCC-AAGGACAGGTGGCA--------------------------------------------------TCCTCCTGC------------CTTCCT--TCAG-----TT----------------GCTATAG--CCAACC-GGGACC-CCAGCACCCAACACATCCTCCTGGGTACTCTGAATGCTGTGGGGGACTCAGGTACCAGGACC-AGCTGATGTGACAAAAAAACAGACAATTCAGAGTC-------------CAAGGAGGAAgtg---tgtgc-gtgtgtgtgtgtgtgtgCCCTA------------AGCTTCCAAAACACTAATTTCTCAGGCACAGAGAATGGAAGAAGGAGGCATAGCAACAGCTGGCTCTGGGCAGTGAGCAATCCTGTCTGAAAATAAAACATTTT-ACAATTCACAACCGAGGCTCATTAAGAATGAATGGATTGGCGGGTATAAATAGCTTGCTGCGTTAAGAAGTCAGGAAACGGCATATGCACTCGATGGAAAATCAGTGGCTATGGAGCCTgcttatt i mm10.chr11 I 2 C 0 s canFam3.chr9 15668265 665 - 61074082 cc-aaggagggggaagtattggcagacattctgattttcaaaaaagtagccagaattccataatttttt------ag-taagaattctccatgtttaa-----aaaagttgtcagtgaatgtaaagcagtgagccagatcgagtcact-gctccaccagtttgcaa-ccgctAACACCAGCAAATGTCTAACC-CTTGGAGGACAGATGGCA-------------------------------------------------TCCCACCTCCCAACCTGGAAGCCTTCCTGCTCTGATGTCCTCTGCTTCTTTCTCCAAGCCTCAG--CCAGCC-TGGCCCCCCTGCACA-AACATACCCTCCCAGCTGCTCCAAAGGCTGCAGGGAGTTCACATGCCATTTTTGGGCCAATGTGACA--GAAATGGCAAGTCCAGAGTCTGCTGGGGAAACGTTGGGGGAGGGGGTGTTGAGTCGTGGGTG-GGAGAGGGCAGCTGAGCACTCGGAGTAGCTTCCAAAATGCTAATTTCTTAGGAACAGAAGAAGAAGGAAGGTGGCATAGCAACAGCTGGCTCTGGGCAGTGAGCAATCCTGTATGAAAATAAAACATTTT-ACAATCTACAACCGTGGCTCATTAAGAATGAATGGATCTACTGGTATAAATAGCACGCTGCGTTAAGAAGTCAGGAAACAGCATATGGGTTTGATGGAAAAACGGCTGCCACCGAA-CTGCTGATT i canFam3.chr9 C 0 C 0 a score=6876.000000 s hg38.chr17_GL383563v3_alt 186179 2 + 375691 AG s panTro4.chr17 171624 2 + 82630442 AG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69870 2 + 73212453 AG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133589 2 - 81552678 AG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96129 2 + 80904711 AG i rheMac3.chr16 C 0 I 1 s chlSab2.chr16 99421 2 + 75148670 AG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 909875 2 - 1291538 AG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75845985 2 + 122082543 ag i mm10.chr11 C 0 C 0 s canFam3.chr9 15668930 2 - 61074082 AG i canFam3.chr9 C 0 C 0 e papAnu2.chr16 104003 4 + 74645514 I e macFas5.chr16 96644 3 + 80997621 I a score=4500.000000 s hg38.chr17_GL383563v3_alt 186181 1 + 375691 C s panTro4.chr17 171626 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69872 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133591 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96132 1 + 80904711 C i rheMac3.chr16 I 1 C 0 s macFas5.chr16 96647 1 + 80997621 C i macFas5.chr16 I 3 C 0 s chlSab2.chr16 99423 1 + 75148670 C i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 909877 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75845987 1 + 122082543 c i mm10.chr11 C 0 C 0 s canFam3.chr9 15668932 1 - 61074082 C i canFam3.chr9 C 0 C 0 e papAnu2.chr16 104003 4 + 74645514 I a score=-47.000000 s hg38.chr17_GL383563v3_alt 186182 3 + 375691 TCG s panTro4.chr17 171627 3 + 82630442 TCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69873 3 + 73212453 CCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133592 3 - 81552678 TTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96133 3 + 80904711 TGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96648 3 + 80997621 TGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104007 3 + 74645514 TGG i papAnu2.chr16 I 4 C 0 s chlSab2.chr16 99425 3 + 75148670 GGG i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 909878 3 - 1291538 TCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75845988 3 + 122082543 cca i mm10.chr11 C 0 C 0 s canFam3.chr9 15668933 3 - 61074082 TCA i canFam3.chr9 C 0 C 0 a score=43610.000000 s hg38.chr17_GL383563v3_alt 186185 15 + 375691 GTGGGCGGAGGCTCT s panTro4.chr17 171630 15 + 82630442 GTGGGCGGAGGCTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69876 15 + 73212453 GTGGACGGAGGCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133595 15 - 81552678 GTCGGCGGAGGCTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96136 15 + 80904711 GTCGGCAGTGGCTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96651 15 + 80997621 GTCGGCGGTGGCTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104010 15 + 74645514 GTCGGCGGTGGCTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99428 15 + 75148670 GTCGGCGGTGGCTCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 909881 15 - 1291538 GCTGGCGGAGGGTCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75845991 15 + 122082543 gtcggctgcagctct i mm10.chr11 C 0 C 0 e canFam3.chr9 15668936 0 - 61074082 C a score=38289.000000 s hg38.chr17_GL383563v3_alt 186200 24 + 375691 TCACTCACTAACAAGAC--GGGTCCC s panTro4.chr17 171645 24 + 82630442 TCACTCACTAACAAGAC--GGGTCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69891 24 + 73212453 TCACTGACTAACAAGAC--AGGTCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133610 24 - 81552678 GCACTCACTAATGAGAC--GGGTCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96151 20 + 80904711 GC----ACTAACAAAAC--GGGTCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96666 20 + 80997621 GC----ACTAACAAAAC--GGGTCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104025 20 + 74645514 GC----ACTAACAAAAC--GGATCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99443 20 + 75148670 GC----ACTCACAAGAC--GGGTCCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75846006 22 + 122082543 ----gtgctaacaagacagaggtcac i mm10.chr11 C 0 C 0 e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C a score=1883.000000 s hg38.chr17_GL383563v3_alt 186224 1 + 375691 G s panTro4.chr17 171669 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 133634 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96171 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96686 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104045 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99463 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s mm10.chr11 75846028 1 + 122082543 a i mm10.chr11 C 0 C 0 e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e ponAbe2.chr17 69915 0 + 73212453 C a score=11097.000000 s hg38.chr17_GL383563v3_alt 186225 7 + 375691 GGTTCAA s panTro4.chr17 171670 7 + 82630442 GGTTCAA i panTro4.chr17 C 0 C 0 s rheMac3.chr16 96172 7 + 80904711 GGTCCGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96687 7 + 80997621 GGTCCGA i macFas5.chr16 C 0 T 50 s papAnu2.chr16 104046 7 + 74645514 GGTCCGA i papAnu2.chr16 C 0 T 50 s chlSab2.chr16 99464 7 + 75148670 GGTTCGA i chlSab2.chr16 C 0 C 0 s mm10.chr11 75846029 7 + 122082543 ggttcaa i mm10.chr11 C 0 C 0 e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=16878.000000 s hg38.chr17_GL383563v3_alt 186232 13 + 375691 AGCTGGGGTCGGC s panTro4.chr17 171677 13 + 82630442 AGCTGGGGTCGGC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 96179 13 + 80904711 AGCTCGCATCGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96644 13 + 80997621 AGCCTGGGTCGGC i macFas5.chr16 T 50 C 0 s papAnu2.chr16 104003 13 + 74645514 AGCCTGGGTCGGC i papAnu2.chr16 T 50 C 0 s chlSab2.chr16 99471 13 + 75148670 AGCCTGGGTCGGC i chlSab2.chr16 C 0 I 19 s mm10.chr11 75846036 13 + 122082543 agtctgcatgggc i mm10.chr11 C 0 C 0 e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=-754.000000 s hg38.chr17_GL383563v3_alt 186245 1 + 375691 C s panTro4.chr17 171690 1 + 82630442 C i panTro4.chr17 C 0 C 0 s rheMac3.chr16 96192 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96657 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104016 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s mm10.chr11 75846049 1 + 122082543 c i mm10.chr11 C 0 I 3 e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=17982.000000 s hg38.chr17_GL383563v3_alt 186246 24 + 375691 GAGGCTCTGCACTAACAAGACAGG s panTro4.chr17 171691 24 + 82630442 GAGGCTCTGCAGTAACAAGACAGG i panTro4.chr17 C 0 T 50 s rheMac3.chr16 96193 24 + 80904711 GTGGCTCTGCACTCACAAGACGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96658 24 + 80997621 GTGGCTCTGCACTAACAAAACGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104017 24 + 74645514 GTGGCTCTGCACTAACAAAACGGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=2010.000000 s hg38.chr17_GL383563v3_alt 186270 3 + 375691 TGC s panTro4.chr17 171665 3 + 82630442 TCC i panTro4.chr17 T 50 C 0 s rheMac3.chr16 96217 3 + 80904711 TCC i rheMac3.chr16 C 0 I 39 s macFas5.chr16 96682 3 + 80997621 TCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104041 3 + 74645514 TCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=3584.000000 s hg38.chr17_GL383563v3_alt 186273 9 + 375691 AGGGTTCAA s panTro4.chr17 171668 9 + 82630442 CGGGTTCAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96685 9 + 80997621 CGGGTCCGA i macFas5.chr16 C 0 T 50 s papAnu2.chr16 104044 9 + 74645514 CGGGTCCGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=19667.000000 s hg38.chr17_GL383563v3_alt 186282 50 + 375691 AGCTGGGGTCAGCTGAGGCTCTGCAGTAACAAGAGGGATCCCGGGTTCAA s panTro4.chr17 171677 50 + 82630442 AGCTGGGGTCGGCCGAGGCTCTGCAGTAACAAGACAGGTCTAGGGTTCAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96644 50 + 80997621 AGCCTGGGTCGGCGGTGGCTCTGCACTAACAAAACGGGTCCCGGGTCCGA i macFas5.chr16 T 50 T 50 s papAnu2.chr16 104053 50 + 74645514 AGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTCCGA i papAnu2.chr16 C 0 T 100 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=23849.000000 s hg38.chr17_GL383563v3_alt 186332 50 + 375691 AGCTGGGGTCGGCGGAGGCTCTGCACTAACAAGATGGATCCCGGGTTCAA s panTro4.chr17 171727 50 + 82630442 AGCTGGGGTCGGCGGAGGCTCTGCAGTAACAAGACGGATCCCGGGTTCAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96644 50 + 80997621 AGCCTGGGTCGGCGGTGGCTCTGCACTAACAAAACGGGTCCCGGGTCCGA i macFas5.chr16 T 50 T 50 s papAnu2.chr16 104003 50 + 74645514 AGCCTGGGTCGGCGGTGGCTCTGCACTAACAAAACGGATCCCGGGTCCGA i papAnu2.chr16 T 100 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=36780.000000 s hg38.chr17_GL383563v3_alt 186382 88 + 375691 AGCTGGGGTCGGGGGAGGCTCTACACTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCCGAGGCTCTGCACTAACAAGACGGA s panTro4.chr17 171777 88 + 82630442 AGCTGGGGTTGGCCGAGGCTCTGCAGTAACAAGACAGGTCCAGGGTTCAAAGCTGGGGTCGGCGGAGGCTCCACACTAACAAGACGGA i panTro4.chr17 C 0 T 150 s macFas5.chr16 96644 88 + 80997621 AGCCTGGGTCGGCGGTGGCTCTGCACTAACAAAACGGGTCCCGGGTCCGAAGCTCGCATCGGCAGTGGCTCTGCACTCACAAGACGGG i macFas5.chr16 T 50 C 0 s papAnu2.chr16 104053 88 + 74645514 AGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTCCGAAGCTCGGGTCGGCGGTGGCTCTGCACTAACAAAACGGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=67356.000000 s hg38.chr17_GL383563v3_alt 186470 155 + 375691 TCCAGGGTTCAAAGCTGGGGTCGGCCGAGGCTCTACACT----AACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCGGAGGCTCTGCAGTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCGGAGGCTCCACACTAACAAGACAGGTCCCG s panTro4.chr17 171715 155 + 82630442 TCTAGGGTTCAAAGCTGGGGTCGGCGGAGGCTCTGCAGT----AACAAGACGGATCCCGGGTTCAAAGCTGGGGTTGGCCGAGGCTCTGCAGTAACAAGACAGGTCCAGGGTTCAAAGCTGGGGTCGGCGGAGGCTCCACACTAACAAGACGGATCCCG i panTro4.chr17 T 150 C 0 s macFas5.chr16 96732 159 + 80997621 TCCCGGGTCTGAAGCTCGGGTCGGCGGTAGCTCTGCACTAACAAACAAGACGGGTCCCGGGTTAGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTCCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCG i macFas5.chr16 C 0 T 50 s papAnu2.chr16 104141 155 + 74645514 TCCCGGTTCCGAAGCTCGGGTCGGCGGTGGCTCCGCACT----CACAAGACGGGTCCCGGGTTCGAAGCTCGGGTTGGCGGTGGCTCTGCACTAACAAGACGGGTCCCGGGTTCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=27239.000000 s hg38.chr17_GL383563v3_alt 186625 61 + 375691 GGTTCAAAGCTGGGGTCGGCGGAGGCTCCACACTAACAAGATGGATCCAGGGTTCAAAGCT s panTro4.chr17 171870 61 + 82630442 GGTTCAAAGCTGGGGTCGGCCGAGGCTCCACACTAACAAGACGGATCCCGGGTTCAAAGCT i panTro4.chr17 C 0 C 0 s macFas5.chr16 96841 61 + 80997621 GGTCCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 T 50 T 50 s papAnu2.chr16 104296 61 + 74645514 GGTTCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGTTCCGAAGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=23954.000000 s hg38.chr17_GL383563v3_alt 186686 50 + 375691 GGGGTCGGCGGAGGCTCCGCACTAACAAGATGGATCCTGGGTTCAAAGCT s panTro4.chr17 171931 50 + 82630442 GGGGTCGGCGGTGGCTCCGCACTAACAAGACGGGTCCCGGGTTCAAAGCT i panTro4.chr17 C 0 C 0 s macFas5.chr16 96852 50 + 80997621 TGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 T 50 T 50 s papAnu2.chr16 104357 50 + 74645514 CGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGTTCCGAAGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=13122.000000 s hg38.chr17_GL383563v3_alt 186736 28 + 375691 GGGGTCGGCGGAGGCTCCACACTAACAA s panTro4.chr17 171981 28 + 82630442 GGGGTCGGCGGTGGCTCTGCACTAACAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96852 28 + 80997621 TGGGTCGGCGGTGGCTCCGCACTCACAA i macFas5.chr16 T 50 C 0 s papAnu2.chr16 104407 28 + 74645514 CGGGTCGGCGGTGGCTCTGCACTAACAA i papAnu2.chr16 C 0 I 104 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=2346.000000 s hg38.chr17_GL383563v3_alt 186764 4 + 375691 GACG s panTro4.chr17 172009 4 + 82630442 GACG i panTro4.chr17 C 0 I 152 s macFas5.chr16 96880 4 + 80997621 GACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104539 4 + 74645514 GACG i papAnu2.chr16 I 104 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=9550.000000 s hg38.chr17_GL383563v3_alt 186768 18 + 375691 GATCCCGGGTTCAAAGCT s panTro4.chr17 172165 18 + 82630442 GGTCCCGGGTTCAAAGCT i panTro4.chr17 I 152 C 0 s macFas5.chr16 96884 18 + 80997621 GGTCCCGGGTTCGAAGCT i macFas5.chr16 C 0 T 50 s papAnu2.chr16 104543 18 + 74645514 GGTCCCGGGTTCGAAGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=22814.000000 s hg38.chr17_GL383563v3_alt 186786 50 + 375691 GGGGTCGGCGGAGGCTCCACACTAACAAGATGGATCCAGGGTTCAAAGCT s panTro4.chr17 172183 50 + 82630442 GGGGTCGGCGGAGGCTCTGCATTAACAAGACGGATCCCGGGTTCAAAGCT i panTro4.chr17 C 0 C 0 s macFas5.chr16 96852 50 + 80997621 TGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 T 50 T 50 s papAnu2.chr16 104561 50 + 74645514 CGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=23547.000000 s hg38.chr17_GL383563v3_alt 186836 50 + 375691 GGGGTCGGCGGAGGCTCCGCACTAACAAGATGGATCCTGGGTTCAAAGCT s panTro4.chr17 172233 50 + 82630442 GGGGTCGGCGGAGGCTCCGCACTAACAAGACGGGTCCCGGGTTCAAAGCT i panTro4.chr17 C 0 C 0 s macFas5.chr16 96852 50 + 80997621 TGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 T 50 T 50 s papAnu2.chr16 104611 50 + 74645514 TGGGTCGGCGGTGGCTCCGCACTAACAAAACGGATCCCGGTTCCGAAGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=22809.000000 s hg38.chr17_GL383563v3_alt 186886 50 + 375691 GGGGTCGGCCGAGGCTCTACACTAACAAGACAGGTCCCGGGTTCAAAGCT s panTro4.chr17 172283 50 + 82630442 GGGGTCGGCCGAGGCTCTGCACTAACAAGACGGGTCCCGGGTTCAAAGCT i panTro4.chr17 C 0 C 0 s macFas5.chr16 96852 50 + 80997621 TGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 T 50 T 100 s papAnu2.chr16 104661 50 + 74645514 CGGGTCGGCGGTGGCTCCACACTCACAAGACGGGTCCCGGGTCTGAAGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=42291.000000 s hg38.chr17_GL383563v3_alt 186936 96 + 375691 GGGGTCGGCCGAGGCTCTGCAGTAACAAGAGGGATCCAGGGTTCAAAGCTGGGGTCGGCCGAGGCTCCGCACTAACAAGACAGATCCAGGGTTCAA s panTro4.chr17 172333 96 + 82630442 GGGGTCGGCCGAGGCTCTGCACTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCCGAGGCTCTGCACTAACAAGACGGGTCCCGGGTTCAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96802 96 + 80997621 TGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTCCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGA i macFas5.chr16 T 100 T 254 s papAnu2.chr16 104711 96 + 74645514 CGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=32892.000000 s hg38.chr17_GL383563v3_alt 187032 82 + 375691 AGCTGGGGTCGGCCAAGGCTCTACACTAACAAGACGGATCCAGGGTTCAAAGCTGGGGTCGGCCGAGGCTCTACACTAACAA s panTro4.chr17 172429 82 + 82630442 AGCTGGGGTCGGCCGAGGCTCTGCACTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTAGGGGGTGGCTCCACACCAACAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96644 82 + 80997621 AGCCTGGGTCGGCGGTGGCTCTGCACTAACAAAACGGGTCCCGGGTCCGAAGCTCGCATCGGCAGTGGCTCTGCACTCACAA i macFas5.chr16 T 254 C 0 s papAnu2.chr16 104807 82 + 74645514 AGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAA i papAnu2.chr16 C 0 T 450 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=13277.000000 s hg38.chr17_GL383563v3_alt 187114 31 + 375691 GAC--GGGTCCCGGGTTCAAAGCTGGGGTCGGC s panTro4.chr17 172511 33 + 82630442 GACGGGGGTCCCAGGTTTAAAGCTGGGGTCGGC i panTro4.chr17 C 0 T 52 s macFas5.chr16 96726 31 + 80997621 GAC--GGGTCCCGGGTCTGAAGCTCGGGTCGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104439 31 + 74645514 GAC--GGGTCCCGGGTTCGAAGCTCGGGTCAGT i papAnu2.chr16 T 450 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=18972.000000 s hg38.chr17_GL383563v3_alt 187145 50 + 375691 GGAGGCTCTGCAGT----AACAAGAC--GGGTCCCGGGTTCAAAGCTGGGGTTGGC s panTro4.chr17 172492 52 + 82630442 GGTGGCTCCACACC----AACAAGACGGGGGTCCCAGGTTTAAAGCTGGGGTCGGC i panTro4.chr17 T 52 T 152 s macFas5.chr16 96757 54 + 80997621 GGTAGCTCTGCACTAACAAACAAGAC--GGGTCCCGGGTTAGAAGCCTGGGTCGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104470 50 + 74645514 GGTGGCTCCGCACT----CACAAGAC--GGGTCCCGGGTTCGAAGCTCGGGTCGGC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=42711.000000 s hg38.chr17_GL383563v3_alt 187195 91 + 375691 GGAGGCTCCACACTAACAAGACGGATCCCGGGTTCAAAGCTGGGGTCGGCGGAGGCTCCGCACTAACAAGATGGATCCCGGGTTCAAAGCT s panTro4.chr17 172392 91 + 82630442 CGAGGCTCTGCACTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCCGAGGCTCTGCACTAACAAGACGGGTCCCGGGTTCAAAGCT i panTro4.chr17 T 152 C 0 s macFas5.chr16 96811 91 + 80997621 GGTGGCTCCGCACTCACAAGACGGGTCCCGGGTCCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 C 0 T 50 s papAnu2.chr16 104520 91 + 74645514 GGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=12261.000000 s hg38.chr17_GL383563v3_alt 187286 31 + 375691 GGGGTCGGCCGAGGCTCTACACTAACAAGAC s panTro4.chr17 172483 31 + 82630442 GGGGTAGGGGGTGGCTCCACACCAACAAGAC i panTro4.chr17 C 0 T 100 s macFas5.chr16 96852 31 + 80997621 TGGGTCGGCGGTGGCTCCGCACTCACAAGAC i macFas5.chr16 T 50 C 0 s papAnu2.chr16 104611 31 + 74645514 TGGGTCGGCGGTGGCTCCGCACTAACAAAAC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=8749.000000 s hg38.chr17_GL383563v3_alt 187317 19 + 375691 AGGTCCCGGGTTCAAAGCT s panTro4.chr17 172414 19 + 82630442 GGGTCCCGGGTTCAAAGCT i panTro4.chr17 T 100 C 0 s macFas5.chr16 96883 19 + 80997621 GGGTCCCGGGTTCGAAGCT i macFas5.chr16 C 0 T 253 s papAnu2.chr16 104642 19 + 74645514 GGATCCCGGTTCCGAAGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=5876.000000 s hg38.chr17_GL383563v3_alt 187336 30 + 375691 GGGGTCGGCCGAGGCTCTGCAGTGACAAGA s panTro4.chr17 172433 30 + 82630442 GGGGTCGGCCGAGGCTCTGCACTAACAAGA i panTro4.chr17 C 0 T 450 s papAnu2.chr16 104661 30 + 74645514 CGGGTCGGCGGTGGCTCCACACTCACAAGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e macFas5.chr16 96902 253 + 80997621 T e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=12947.000000 s hg38.chr17_GL383563v3_alt 187366 71 + 375691 GGGATCCAGGGTTCAAATCTGGGGTCGGCCGAGGCTCTGCAGTGACAAGAGGGATCCAGGGTTCAAATTTG s panTro4.chr17 172013 71 + 82630442 GGGGTCCCAGGTTCAAAGCTGGGGTCGGCCGAGGCTCTGCAGTAACAAGACGGATCCCGGGTTCAAAGCTG i panTro4.chr17 T 450 C 0 s papAnu2.chr16 104691 71 + 74645514 CGGGTCCCGGGTCTGAAGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCTC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e macFas5.chr16 96902 253 + 80997621 T e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=20312.000000 s hg38.chr17_GL383563v3_alt 187437 45 + 375691 GGGTCGGCCGAGGCTCTGCACTAACAAGACGGATCCAGGGTTCAA s panTro4.chr17 172084 45 + 82630442 GGGTCGGCGGAGGCTCCACACTAACAACACGGGTCCCGGGTTCAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96649 45 + 80997621 GGGTCGGCGGTGGCTCTGCACTAACAAAACGGGTCCCGGGTCCGA i macFas5.chr16 T 253 T 50 s papAnu2.chr16 104762 45 + 74645514 GGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=35681.000000 s hg38.chr17_GL383563v3_alt 187482 82 + 375691 AGCTGGGGTCGGCGGAGGCTCTACACTAACAAGACGGATCCAGGGTTCAAAGCTGGGGTCGGCGGAGGCTCCGCAGTAACAA s panTro4.chr17 172129 82 + 82630442 AGCTGGGGTCGGCGGAGGCTCCGCACTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCGGAGGCTCTGCATTAACAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96644 82 + 80997621 AGCCTGGGTCGGCGGTGGCTCTGCACTAACAAAACGGGTCCCGGGTCCGAAGCTCGCATCGGCAGTGGCTCTGCACTCACAA i macFas5.chr16 T 50 I 54 s papAnu2.chr16 104807 82 + 74645514 AGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=4857.000000 s hg38.chr17_GL383563v3_alt 187564 10 + 375691 GACGGGTCCA s panTro4.chr17 172211 10 + 82630442 GACGGATCCC i panTro4.chr17 C 0 C 0 s macFas5.chr16 96780 10 + 80997621 GACGGGTCCC i macFas5.chr16 I 54 C 0 s papAnu2.chr16 104889 10 + 74645514 GACGGGTCCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69915 0 + 73212453 C a score=51417.000000 s hg38.chr17_GL383563v3_alt 187574 74 + 375691 GGGTTCAAAGCTGGGGTCGGCGGAGGCTCCGCAGTAACAAGACGGGTCCAGGGTTCAAAGCTGGGGTCGGCGGA s panTro4.chr17 172221 74 + 82630442 GGGTTCAAAGCTGGGGTCGGCGGAGGCTCCGCACTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCCGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69915 74 + 73212453 GGGTGCAAAAGTAGGGTCGGTGGAGGCTCCGCACTAACAAGACGGGTCCGGGGTTCAAAGCTGGGGTCCGCAGA i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 96790 74 + 80997621 GGGTTAGAAGCCTGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGGTCCGAAGCCTGGGTCGGCGGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 104899 74 + 74645514 GGTTCCGAAGCTCGGGTCGGCGGTGGCTCCGCACTCACAAGACGGGTCCCGGTTCCGAAGCTCGGGTCGGCGGT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C a score=19266.000000 s hg38.chr17_GL383563v3_alt 187648 38 + 375691 GGCTCCGCAGTAACAAGACGGGTCCCGGGTTCAAAGCT s panTro4.chr17 172295 38 + 82630442 GGCTCTGCACTAACAAGACGGGTCCCGGGTTCAAAGCT i panTro4.chr17 C 0 C 0 s macFas5.chr16 96864 38 + 80997621 GGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 C 0 T 204 s papAnu2.chr16 104973 38 + 74645514 GGCTCCGCACTCACAAGACGGGTCCCGGGTTCGAAGCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=31869.000000 s hg38.chr17_GL383563v3_alt 187686 78 + 375691 GGGGTCGGCGGAGGCTCCGCAGTAACAAGACGGGTCCAGGGTTCAAAGCTGGGGTCGGCCAAGGCTCCACACTAACGA s panTro4.chr17 172333 78 + 82630442 GGGGTCGGCCGAGGCTCTGCACTAACAAGACGGGTCCCGGGTTCAAAGCTGGGGTCGGCCGAGGCTCTGCACTAACAA i panTro4.chr17 C 0 C 0 s macFas5.chr16 96698 78 + 80997621 CGCATCGGCAGTGGCTCTGCACTCACAAGACGGGTCCCGGGTCTGAAGCTCGGGTCGGCGGTAGCTCTGCACTAACAA i macFas5.chr16 T 204 I 87 s papAnu2.chr16 105011 78 + 74645514 TGGGTCGGCGGTGGCTCCGCACTCACAAGACAGGTCCCGGTTCCGAAGCTCGGGTCGGCGGTGGCTCTGCACTAACAA i papAnu2.chr16 C 0 T 50 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=6051.000000 s hg38.chr17_GL383563v3_alt 187764 33 + 375691 GACGGGTCCATGGGTCAAAGCTGGGGTCGGCCA s panTro4.chr17 172411 33 + 82630442 GACGGGTCCCGGGTTCAAAGCTGGGGTCGGCCG i panTro4.chr17 C 0 C 0 s papAnu2.chr16 105039 33 + 74645514 GACAGGTCCCGGTTCCGAAGCTCGGGTCGGCGG i papAnu2.chr16 T 50 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e macFas5.chr16 96776 87 + 80997621 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=4487.000000 s hg38.chr17_GL383563v3_alt 187797 11 + 375691 AGGCTCTGCAG s panTro4.chr17 172444 11 + 82630442 AGGCTCTGCAC i panTro4.chr17 C 0 C 0 s macFas5.chr16 96863 11 + 80997621 TGGCTCCGCAC i macFas5.chr16 I 87 C 0 s papAnu2.chr16 105072 11 + 74645514 TGGCTCTGCAC i papAnu2.chr16 C 0 I 6 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=273.000000 s hg38.chr17_GL383563v3_alt 187808 1 + 375691 T s panTro4.chr17 172455 1 + 82630442 T i panTro4.chr17 C 0 C 0 s macFas5.chr16 96874 1 + 80997621 T i macFas5.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e papAnu2.chr16 105083 6 + 74645514 I e rheMac3.chr16 96220 39 + 80904711 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=-69.000000 s hg38.chr17_GL383563v3_alt 187809 1 + 375691 A s panTro4.chr17 172456 1 + 82630442 A i panTro4.chr17 C 0 C 0 s rheMac3.chr16 96259 1 + 80904711 A i rheMac3.chr16 I 39 C 0 s macFas5.chr16 96875 1 + 80997621 C i macFas5.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e chlSab2.chr16 99484 19 + 75148670 I e papAnu2.chr16 105083 6 + 74645514 I e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=34380.000000 s hg38.chr17_GL383563v3_alt 187810 26 + 375691 ACAAGACGGGTCCCGGGTTCAAAGCT s panTro4.chr17 172457 26 + 82630442 ACAAGACGGGTCCCGGGTTCAAAGCT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 96260 26 + 80904711 ACAAGACGGGTCCCGGGTTAGAAGCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96876 26 + 80997621 ACAAGACGGGTCCCGGGTTCGAAGCT i macFas5.chr16 C 0 T 11 s papAnu2.chr16 105089 26 + 74645514 ACAAGACGGGTCCCGGGTTCGAAGCT i papAnu2.chr16 I 6 C 0 s chlSab2.chr16 99503 26 + 75148670 ACAAGACGGGTCCCGGGTTTGAAGCT i chlSab2.chr16 I 19 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=615.000000 s hg38.chr17_GL383563v3_alt 187836 3 + 375691 GGG s panTro4.chr17 172483 3 + 82630442 GGG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 96286 3 + 80904711 TGG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 105115 3 + 74645514 CGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99529 2 + 75148670 -TG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e canFam3.chr9 15668936 0 - 61074082 C e calJac3.chrUn_GL286409 909896 0 - 1291538 C e macFas5.chr16 96902 11 + 80997621 T e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=8822.000000 s hg38.chr17_GL383563v3_alt 187839 9 + 375691 GTCGGCGGT s panTro4.chr17 172486 9 + 82630442 GTAGGGGGT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 96289 9 + 80904711 GTCGGCGGT i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 105118 9 + 74645514 GTCGGCGGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99531 9 + 75148670 GTCGGCGGT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15668936 9 - 61074082 GTTGGCTGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e calJac3.chrUn_GL286409 909896 0 - 1291538 C e macFas5.chr16 96902 11 + 80997621 T e nomLeu3.chr19 133635 0 - 81552678 C e ponAbe2.chr17 69989 0 + 73212453 C a score=10053.000000 s hg38.chr17_GL383563v3_alt 187848 6 + 375691 GGCTCC s panTro4.chr17 172495 6 + 82630442 GGCTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69989 6 + 73212453 GGTTCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 96298 6 + 80904711 GGCTCC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 105127 6 + 74645514 GGCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99540 6 + 75148670 GGCTCC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15668945 6 - 61074082 AGCTCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e calJac3.chrUn_GL286409 909896 0 - 1291538 C e macFas5.chr16 96902 11 + 80997621 T e nomLeu3.chr19 133635 0 - 81552678 C a score=28311.000000 s hg38.chr17_GL383563v3_alt 187854 23 + 375691 GCACTAACAAGACGGGGGTTCCA s panTro4.chr17 172501 23 + 82630442 ACACCAACAAGACGGGGGTCCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 69995 23 + 73212453 GCGCTAAGAAGACGGGGGTCCCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 96304 21 + 80904711 GCACTCACAAGAC--GGGTCCCG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 105133 21 + 74645514 GCACTCACAAGAC--GGGTCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99546 21 + 75148670 GCACTCACGAGAC--GGGTCCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 909896 19 - 1291538 GCACTCACGAGAC----CTCCTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15668951 23 - 61074082 GCACTACCGAGACAGAGGTCTCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e macFas5.chr16 96902 11 + 80997621 T e nomLeu3.chr19 133635 0 - 81552678 C a score=39673.000000 s hg38.chr17_GL383563v3_alt 187877 11 + 375691 GGTTCAAAGCT s panTro4.chr17 172524 11 + 82630442 GGTTTAAAGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70018 11 + 73212453 GGTTCAAAGCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133635 11 - 81552678 GGTTCGAAGCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96325 11 + 80904711 GGTTCGAAGCT i rheMac3.chr16 C 0 I 1 s macFas5.chr16 96891 11 + 80997621 GGTTCGAAGCT i macFas5.chr16 T 11 I 1 s papAnu2.chr16 105154 11 + 74645514 GGTTCGAAGCT i papAnu2.chr16 C 0 I 4 s chlSab2.chr16 99567 11 + 75148670 GGTCCAAAGCT i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 909915 11 - 1291538 GGTTCAAAGCT i calJac3.chrUn_GL286409 C 0 I 2 s canFam3.chr9 15668974 11 - 61074082 GGTCCCAAGCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I a score=-12673.000000 s hg38.chr17_GL383563v3_alt 187888 4 + 375691 --GGGG s panTro4.chr17 172535 4 + 82630442 --GGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70029 4 + 73212453 --GGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133646 4 - 81552678 --TGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96337 1 + 80904711 -----G i rheMac3.chr16 I 1 I 2 s macFas5.chr16 96903 1 + 80997621 -----G i macFas5.chr16 I 1 I 2 s chlSab2.chr16 99579 1 + 75148670 -----T i chlSab2.chr16 I 1 I 2 s calJac3.chrUn_GL286409 909928 2 - 1291538 --CG-- i calJac3.chrUn_GL286409 I 2 C 0 s canFam3.chr9 15668985 4 - 61074082 TTCA-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I e papAnu2.chr16 105165 4 + 74645514 I a score=25837.000000 s hg38.chr17_GL383563v3_alt 187892 9 + 375691 TCGGCCACA s panTro4.chr17 172539 9 + 82630442 TCGGCCACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70033 9 + 73212453 TTGGCCACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133650 9 - 81552678 TTGGCCACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96340 9 + 80904711 TGGGCCACG i rheMac3.chr16 I 2 C 0 s macFas5.chr16 96906 9 + 80997621 TGGGCCACG i macFas5.chr16 I 2 C 0 s papAnu2.chr16 105169 9 + 74645514 TGGGCCACG i papAnu2.chr16 I 4 C 0 s chlSab2.chr16 99582 9 + 75148670 TGGGCCACG i chlSab2.chr16 I 2 C 0 s calJac3.chrUn_GL286409 909930 9 - 1291538 TAGGCCACG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15668989 9 - 61074082 GGAGCCATG i canFam3.chr9 C 0 C 0 e mm10.chr11 75846050 3 + 122082543 I a score=748525.000000 s hg38.chr17_GL383563v3_alt 187901 232 + 375691 TGGCTTCCCTGATCTTGGAGCACAGAAGGCCTCACACTGTGCCAGCCCTGCTCCCGACCT--GGGCTTAACTCTGGACACACAGTGCC-AGCCCACAGTGAGCTTCTCACAGCTCCTGACCCACAGGACCCC-----------------------------------------------------------CACTCTAATGtcctacctctgggcttgaatgctgccattgacagggagctcactcctccgtcagatgcaaaacactcagttctgtggctggatggctattgat s panTro4.chr17 172548 232 + 82630442 TGGCTTCCCTGATCTTGGAGCACAGAAGGCCTCACACTGTGCCAGCCCTGCTCCCAACGT--GGGCTTAACTCTGGACACACAGTGCC-AGCCCACAGTGAGCTTCTCACAGCTCCTGACCTGCAGGACCCC-----------------------------------------------------------CACTCTAATGtcctacctctgggcttgaatgctgccattgacagggagctcactcctccGTCAGATGCAAAACACTCAGTTCTGTGGCTGGATGGCTATTGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70042 232 + 73212453 TGGCTTCCCTGATCTTGGAGCACAGAAGGCCTCGCCCTGTGCCGGCCCTGCTCCCAACCT--GGGCTTAACTCTGGACATACAGTGCC-AGCCCACAGTGAGCTTCTCACGGCTTCTGACCCGCAGGACCCC-----------------------------------------------------------CACTCTAATGtcctacctctgggcttgaatgctgccattgacagggagctcactcctccgtcagatgcaaaacactcagttctgtggctggatggctgttgat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133659 232 - 81552678 TGGCTTCCCTGATCTTGGAGCACAGAAGGCCTCGCCCTGTGCCAGCCCTGCTCCCAACCT--GGGCTTAACTCTGGACACACAGTGCC-AGCCCACAGTGAGCTTCTCACAGCTTCTGACCCGCAGGACCCC-----------------------------------------------------------CACTCTAATGTGCTAcctctgggcttgaatgctgccattgacagggagctcactcctccgtcagatgcaaaacactcagttctgtggctggatggctattgat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96349 230 + 80904711 TGGCTTCCCTGATCTTGCAGCACAGAAGGCCTCGCCCTGTGCCAGCTCTGCTCGCAACCT--GGGCATAACTC--GACACACAGTGCC-AGCCCACAGTGAGCTTCTCATAGCTTCTGACCCGCAGGACCCC-----------------------------------------------------------CACTCTAATGtcctgcctctgggcttgaatgctcccattgacaaggagctcactcctccgtcagatgcaaaacacccagttctgtggttggatggctgttgat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 96915 230 + 80997621 TGGCTTCCCTGATCTTGCAGCACAGAAGGCCTCGCCCTGCGCCAGCTCTGCTCCCAACCT--GGGCATAACTC--GACACACAGTGCC-AGCCCACAGTAAGCTTCTCATAGCTTCTGACCCGCAGGACCCC-----------------------------------------------------------CACTCTAATGtcctgcctctgggcttgaatgctcccattgacaaggagctcactcctccgtcagatgcaaaacacccagttctgtggttggatggctattgat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105178 230 + 74645514 TGGCTTCCCTGATCTTGCAGCACAGAAGGCCTCGCCCTGCGCCAGCCCTGCTCCCAACCT--GGGCATAACTC--GACACACAGTGCC-AGCCCACGGTGAGCTTCTCATAGCTTCTGACCCGCAGGACCCC-----------------------------------------------------------CACTCTAATGTCCTGCCTCTGGGCTTGAATGCTCCCATTGACAGGGAGCTCACTCCTCCGTCAGATGCAAAGCACCCAGTTCTGTGGTTGGATGGCTGTTGAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99591 230 + 75148670 TGGCTTCCCTGATCTTGGAGCACAGAAGGCCTCACCCTGCGCCAGCCCTGCTCCCAACCT--GGGCATAACTC--GACACACAGTGCC-GGCCCACGGTGAGCTTCTCATAGCTTCGGACCCGCAGGACCCC-----------------------------------------------------------CACTCTAATGtcccgcctccaggcttgaatgctcccactgacagggagctcactcctccgtcagatgcgaaacccccacttctgtggttggacggctgttgat i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 909939 218 - 1291538 CGGACTCCCTGATCTTGGA-CCCAGAAGGCACTGCCGGGCACCAGCCTCACTCCCAATCT-AGGGCCTCACCCTGGACACATGGCACC-AGCCCAC--------------AGCATCTGACccacaggatccc-----------------------------------------------------------ctcgctagtgtcctgcctctgggcttggatgctcccgctgacagggagctcactcctctgtcagatgcaaagcagtcagttctgcagatggacggctatggat i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846053 285 + 122082543 tggctttcccagcctcaggccacag-tgacctcccacc---ccaAGATAGGTGCTAACATGGGGGCATAACAA--CAAACACACCAGC-AGACCATGGTTAGCGTCTCCCAGTTTCTGATGCAGAAGACGCCCCCCCGCCAGAAacacacacacacacacacacacacacacacacacacacacacacacacacTGTAATatccagcctcca--cttgaatgccctcactgacagaaaactcattcccCTGTCAGACACAAAGTACTCAGCTCTGTGGCTGGATGGTAATTAAT i mm10.chr11 I 3 C 0 s canFam3.chr9 15668998 207 - 61074082 TGGACTTCTCTATCTTGTATC--------CCCATCTCT---CCAGCCCTGATCACAGTAT-GGGGGCTAACTCTGGGCACACAGTAACAAATCCATATTGAATTTCTCTCAGTATCTAAAGCATAGCATCCT-----------------------------------------------------------CACTAtcatagcccgtctctt--ctcgaatgctcccaaagatagggaactcactaccATATCAGATACAAGATACCCAATTCTGTGACT-------------- i canFam3.chr9 C 0 C 0 a score=145541.000000 s hg38.chr17_GL383563v3_alt 188133 111 + 375691 cgAGGAAACCTAAATGT-CCCCTGCTGTGGCTATTGATCAAGGAAACCTAAATGTCCCCTGCCCTGCCTCAGCTCTGCTCTGGGTCTGGGAGAAGTGGCCTTAGCTGGCCAC s panTro4.chr17 172780 74 + 82630442 GGAGGAAACCTAAATGT-CCCCTGC-------------------------------------CCTGCCTCAGCTCTGCTCTGGGTCTGGGAGAAGTGGCCTTAGCTGGCCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70274 111 + 73212453 CAAGGAAACCTAAATGT-CCCCTGCCCTGGCTATTGATCAAGGAAACCTAAATGTCCCCTGCCCTGCCTCAGCTCTGCTCTGGGTCTGGGAGAAGGAGCCTTAGCTGGCCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 133891 74 - 81552678 CAAGGAAACCTAAATGT-CCCCTGC-------------------------------------CCTGCCTCAGCTCTGCTCCAGGTCTGGGAGAAGTGGCCTTAGCTGGCCAC i nomLeu3.chr19 C 0 I 108 s rheMac3.chr16 96579 67 + 80904711 CAAGGAAACCTAAATGT--CCCTGC-------------------------------------CCTGCCTCAGCTCTGC------TCTGGGAAAAGTGGCCTTAGCCGGCGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 97145 67 + 80997621 CAAGGAAACCTAAATGT--CCCTGC-------------------------------------CCTGCCTCAGCTCTGG------TCTGGGAAAAGTGGCCTTAGCCGGCGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105408 68 + 74645514 CAACGAAGCCTAAGTGT-CCCCTGC-------------------------------------TCTGCCTCAGCTCTGC------TCTGGGAAAAGTGGCCTTAGCCGGCGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99821 67 + 75148670 cgAGGAAACCTAAATGT--CCCTGC-------------------------------------CCTGCCTCAGCTCTGC------TCTGGGAAAAGTGGCCTTAGCCGGCCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910157 59 - 1291538 c-aggaagtccACACGTCCCCCTGC-------------------------------------CCCGCCTCAGCTCTGC------TTGGGGAAAAGTGGCCCTA--------- i calJac3.chrUn_GL286409 C 0 I 9 s canFam3.chr9 15669205 82 - 61074082 CAGCGGCTACTGAGCAA-GATATGC-----------------------GAATTCCTTCCTATGCTGTCCCAGC-CTGCT-----TTCAGGGAAAGTAGCCCTAACTAGCCAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75846338 0 + 122082543 C a score=61669.000000 s hg38.chr17_GL383563v3_alt 188244 19 + 375691 GCCATCCGTTATGTTTGAC s panTro4.chr17 172854 19 + 82630442 GCCATCCGTTATGTTTGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70385 19 + 73212453 GCCATCCGTTCTGTTTGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134073 19 - 81552678 GCCATCCGTTATGTCTGAC i nomLeu3.chr19 I 108 C 0 s rheMac3.chr16 96646 19 + 80904711 GCCGTCCATTATGTCTGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 97212 19 + 80997621 GCCGTCCGTTATGTCTGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105476 19 + 74645514 GCCGCCCGTTATGTCTGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99888 19 + 75148670 GCCGTCCGTTATGTCTGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910225 19 - 1291538 GCCGTCCATTATGTTTGAC i calJac3.chrUn_GL286409 I 9 C 0 s canFam3.chr9 15669287 18 - 61074082 GTCATCTATTATATCTGA- i canFam3.chr9 C 0 C 0 e mm10.chr11 75846338 0 + 122082543 C a score=654.000000 s hg38.chr17_GL383563v3_alt 188263 35 + 375691 TATCGGACACTGGCCACGCCATCCGTTATGTTTGA s panTro4.chr17 172873 10 + 82630442 TATCGGACAC------------------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70404 35 + 73212453 TATCGGACACTGGCCAAGCCATCCGTTATGTTTCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134092 35 - 81552678 TATCGGACACTGGCCACGCCATCCGTTACGTCTGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96665 10 + 80904711 TGTCGAACAC------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 97231 10 + 80997621 TGTCGAACAC------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105495 10 + 74645514 TATCGAACAC------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99907 10 + 75148670 TGTCGAACAC------------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910244 3 - 1291538 TAT-------------------------------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846338 35 + 122082543 TGGAAGACACTGGCTGGGCCATCCATTATGTCTAA i mm10.chr11 C 0 I 24 s canFam3.chr9 15669305 19 - 61074082 --TAGGACAC-----AAGCTATATGC--------- i canFam3.chr9 C 0 C 0 a score=2362.000000 s hg38.chr17_GL383563v3_alt 188298 8 + 375691 CTATCGGA s ponAbe2.chr17 70439 8 + 73212453 CTATCGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134127 8 - 81552678 CTATCGGA i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 910247 4 - 1291538 ----CAGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15669324 8 - 61074082 AAAAAGGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75846373 24 + 122082543 I e chlSab2.chr16 99917 0 + 75148670 C e papAnu2.chr16 105505 0 + 74645514 C e rheMac3.chr16 96675 0 + 80904711 C e macFas5.chr16 97241 0 + 80997621 C e panTro4.chr17 172883 0 + 82630442 C a score=423380.000000 s hg38.chr17_GL383563v3_alt 188306 163 + 375691 --CACAGAACAGAAAT-AATTGGGCCAATCACTTTTTCTCCCAAGTATGGACGTGAGGTCCT---GAGAGCGGGGTGGGGGTGG-GGCAGATG----------------GTTGGCTTGGAGGGCTGGCAAGCTGCAGAGCGGGCGTCGGGAGCACAGAGCTGGC--ACAAGTAGAAGCAGCT-CAG-CCG s panTro4.chr17 172883 160 + 82630442 -----AGAACAGAAAT-AATTGGGCCAATCACTTTTTCTCCCAAGTATGGACGTGGGGTCCT---GAGAGCGGGGTGGGGGTGG-GGCAGATG----------------GTTGGCTTGGAGGGCGGGCAAGCTGCAGAGCGGGCGTCGGGAGCACAGAGCTGGT--ACAAGTAGAAGCAGCT-CAG-CCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70447 163 + 73212453 --CACAGAACAGAAAT-AATTGGACCAATCACTTTTTCTCCCAAGTATGGACGTGGGGTCCT---GAGAGCAGGGTGGGGGTGG-GGCAGATG----------------GTTGGCTTGGAGGGCGGGCAAGCTGCAGAGCGGGCATCGGGAGCACAGAGCTGGT--ACAAGGAGAAGCAGCT-CAG-CCG i ponAbe2.chr17 C 0 I 288 s nomLeu3.chr19 134135 163 - 81552678 --CACAGAACAGAAAT-AATTGGGCCAATCACTTTTTCTCCCAAGTATGGACGTGGGGTCCT---GAGAGCGGGGTGGGGGTGG-GGCAGATG----------------GTTGACTTGGAGGGCAGGCAAGCTGCAGAGCGGGCATCAGGAGCACAGAGCTGGT--ACAAGTGGAAGCAGCT-CAG-CCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96675 156 + 80904711 -----TGAAGAGAAAT-AACTGGGCCAATCGCTGCTTCTCCCAAGTATGGGCGTGGGGTCCT---GAGAGCGGGGT-GGGGCGG-GGCAGGT-----------------GTTGGCTTGGAGGGTGGGCAGGCTGCAGACTGGGCGTCGGGAGCATGGAGCTGGC--ACAAGTAGAAGCAGCT-CAG-C-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 97241 156 + 80997621 -----TGAAGAGAAAT-AACTGGGCCAATCGCTGCTTCTCCCAAGTATGGGCGTGGAGTCCT---GAGAGCAGGGT-GGGGCGG-GGCAGGT-----------------GTTGGCTTGGAGGGTGGGCAGGCTGCAGACTGGGCGTCGGGAGCATGGAGCTGGC--ACAAGTAGAAGCAGCT-CAG-C-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105505 156 + 74645514 -----TGAAGAGAAAT-AACGGGGCCAATCGCTGCTTCTCCCAAGTATGGGCGTGGGGCCCT---GAgagcggggc-ggggcgg-ggcaggt-----------------GTTGGCTTGGAGGGTGGGCAGGCTGCAGACTGGGCGTCGGGAGCATGGAGCTGGC--ACAAGTAGAAGCAGCT-CAg-c-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 99917 157 + 75148670 -----TGAAGAGAAAT-AACTGGGCCAATCGCTTCTTCTCCCAAGTATGGGCGTGGGGTCCC---AAGAGCAGGGT-GGGGCGG-GGCAGGT-----------------GTTGGCTTGGAGGGTGGGCAGGCTGCAGACTGGGTGTCGGGAGCATGGAGCTGGC--ACAAGTAGAAGCAGCT-CAGCC-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910251 163 - 1291538 --CACTGAACAGAAAT-AACTGGGCCAATCACTTTTCCTCCCAAGTATGGACATGGGGTCCC---GAGAGCGAGGTGGAGGTGG-GGCAGGTG----------------GGTGGCTTGGAGGGAGGGCGAGCTGCAGAGCAGACATCAGGAGCATGGAGCCAGC--ACAGGCAGAAGCAGCT-CGG-CCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846397 160 + 122082543 --CTCTGAGCAGAGAT-GGGGGACCC-------------------TGCTGATGGTGGGTCCT---AAGAGTGTGGATGGGGTGGAAACAGGTGCAGCAACTCAGGCCATGCAGTCTCAGCCTGCT-GCAAGCTACCCAGTAGGCAGAGGAAGCCAAGAGTACAG--ATAGGCAGAATAGCTC-CGG-CCA i mm10.chr11 I 24 C 0 s canFam3.chr9 15669332 153 - 61074082 CAGCCTGAGTAGGAATGAGTTGGGCCTATCACCTCCTC-CTTGAGTGCAGATGTGGGGTTCTGAGGAGAGCAGGCCAGAGGAAG-GGCATAT-----------------GCAGATGTG----------AGACTGAAGATGGAGC----TGATCTAAGAGTTCCCTGAGAAGCAGAAGTGGCCGCTG---- i canFam3.chr9 C 0 C 0 a score=54243.000000 s hg38.chr17_GL383563v3_alt 188469 52 + 375691 CCCTGTCTGTCTCCTCGC----GGCCTCGCCAGCCTTCGTCTCCC------------------------------------------------------------------------------------GCCCTGATTCT s panTro4.chr17 173043 52 + 82630442 CCCTGTCTGTCTCCTCGC----GGCCTCGCCAGCCTTCGTCTCCC------------------------------------------------------------------------------------GCCCTGATTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 134298 48 - 81552678 ----CCCTGTCTCCTCGC----GGCCTCGCCAGCCTTTGTCTCCC------------------------------------------------------------------------------------GCCCTGATTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96831 52 + 80904711 CCTCGTCTGTCTCCTTGC----AGCCTCGCCAGCCTCCGCCTCCC------------------------------------------------------------------------------------ACCCTGCTTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 97397 80 + 80997621 CCTCGTCTGTCTCCTTGC----AGCCTCGCCAGcctccgcctcccgccctccgc--------------------------------------------------------ctcccgccctccgtctcctgccctGCTTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105661 136 + 74645514 ccccgtctgtctccttgt----ggcctcgccagcctccgcctcccgccctccgcctcccgccctccgtctcccgccctccgtctcccgccctccacctcccgccctccgtctcccgccctccgtctcccgccctGCTTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100074 52 + 75148670 CCCCGTCTGTCTCCTTGC----AGCCTCGCCAGCCTCCGTCTCCC------------------------------------------------------------------------------------GCCCTCCGTCT i chlSab2.chr16 C 0 I 30 s calJac3.chrUn_GL286409 910414 52 - 1291538 CCCCATACGTCTCCTGGC----AGTCTCACCAGTCTTCATCTCTC------------------------------------------------------------------------------------GCCCTGCTACT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846557 16 + 122082543 -----------CCCTT-----------------CCTTCGCCACA------------------------------------------------------------------------------------------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15669485 52 - 61074082 --CCATACTCCTCTCCACCACAGGGCTTGCAAGCCTT-ATCTCCT------------------------------------------------------------------------------------TCCCTGCTCT- i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 70610 288 + 73212453 I a score=18787.000000 s hg38.chr17_GL383563v3_alt 188521 55 + 375691 GGGAGAACCTTCCTCAGTGGTCTGGCAGCAACC-TCTACCTCGTGCCAGCCTTGGT s panTro4.chr17 173095 55 + 82630442 GGGAGAACCTTCCTCAGTGGCTTGGCAGCAACC-CCTACCTCGTGCCAGCCTTGGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 134346 55 - 81552678 GGCAGAACCTTCCTCAGTGGCTTGGCAGCAACC-CCCACCTTGTGCCAGCCTTGGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96883 16 + 80904711 GGGAGAACCTTCCTCA---------------------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 97477 16 + 80997621 GGGAGAACCTTCCTCA---------------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105797 16 + 74645514 GGGACAACCTTCCTCA---------------------------------------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910466 44 - 1291538 GGGAGAACTTTCCTCGGCAGCTTGGCAGTAACC-CCTACCTCGGA----------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846573 43 + 122082543 AGAACCCCCTTCTTCAGCAGCCTGGTAACAACCGCCTCACTTG------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15669537 54 - 61074082 -GGAAGACCTCCCCGAGT-GCCTGGCACTGATccctctacttgagctggcctcggt i canFam3.chr9 C 0 C 0 e chlSab2.chr16 100126 30 + 75148670 I e ponAbe2.chr17 70610 288 + 73212453 I a score=183772.000000 s hg38.chr17_GL383563v3_alt 188576 81 + 375691 GGTCCCTGATCCTCACAACCAAAAATCCCC---AACAGTCGGAAAAGAAAAAGCCAGTGA-GCGTCG--AGAACTGAGCGACAGCCT s panTro4.chr17 173150 81 + 82630442 GGTCCCTGATCCTCACAACCAAAAATCCCC---AACAGTCAGAAAAGAAAAAGCCAGTGA-GCGTCG--AGAACTGAGCGACAGCCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 134401 80 - 81552678 GGTCCCTGATCCTCACAACCAAAAATCCCC---AACAGTCAGAAAAGAAAAAGCCAGTGA-GCGTCG--AGAACTGAGCGAGAG-CT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96899 81 + 80904711 GGTCCGTGATCCTCACAACCAAAAACCCCC---AACAGTCAGAACAGAAAGAGCTAGTGA-CCGTGG--GGAGCCGAGCGAGAGCCT i rheMac3.chr16 C 0 I 13 s macFas5.chr16 97493 81 + 80997621 GGTCCGTGATCCTCACAACCAAAAACCCCC---AACAGTCAGAACAGAAAGAGCCAGTGA-CCATGG--GGAGCCGAGCGAGAGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105813 81 + 74645514 GGTCCATGATCCTCACAACCAAAAACTCCC---AACAGTCAGAACAGAAAGAGCCAGTGA-CCGTGG--GGAGCCGAGCGAGAGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100156 81 + 75148670 GGTCTCTGATCCTCACAACCAAAAACCCCC---AACAGTCAGAACAGAAAAAGCCAGTGA-CGGTGG--GGAGCCGAGCGAGAGCTT i chlSab2.chr16 I 30 C 0 s calJac3.chrUn_GL286409 910510 76 - 1291538 GGTCCCTGATCCTCACAACCAAAAATCCCT---AACAGTCAGAAAAG-CAGAGCCAGCAA-GCACAG--GGAGCTGAG----AGCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846616 66 + 122082543 --------------------AAAAATCCCC-TGAACTATCAGACAGGGCCAAGCCAGCCATGTGTTGATGGAGACAAGGGTCAGCCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15669591 84 - 61074082 ggtctctgttcctggcaaccaaaTATCCTCTTGCCAAGTCTGAATGGGGACAGCCAGTGT-TCGTGG--TGATTTGGGCAATAGCCT i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 70610 288 + 73212453 I a score=22221.000000 s hg38.chr17_GL383563v3_alt 188657 27 + 375691 GACGCTGCACGGCTTCCGCCACGGGCG s panTro4.chr17 173231 27 + 82630442 GACGCTGCACGGCTTCCGCCACGGGCG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 134481 27 - 81552678 GACTCAGCATGGCTTCTGCCAAGGGCG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 97574 27 + 80997621 CACTCCACACGGCTTCTGCCACGGGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 105894 26 + 74645514 CACTCCACACGGCTTCTCCCAC-GGCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100237 27 + 75148670 CACTCCACACGGTTTCTCCCACGGGCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910586 26 - 1291538 AACCCTGCATGGCTTCTGCCATGGGC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846682 15 + 122082543 ---TGTGCTCCACTCCTG--------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15669675 21 - 61074082 ------AGTCGGTGTTAAATTCGGGGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 96980 13 + 80904711 I e ponAbe2.chr17 70610 288 + 73212453 I a score=55537.000000 s hg38.chr17_GL383563v3_alt 188684 38 + 375691 GGGCATGCGCTGGGTTTTGGA--AGCCGGGATCCTGGGCC s panTro4.chr17 173258 37 + 82630442 GGGAA-GCGCTGGGTTTTGGA--AGCCGGGATCCTGGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70898 36 + 73212453 GGGCATGTGCTGG--TTTGGA--AGCCGGGATCCTGGGTC i ponAbe2.chr17 I 288 C 0 s nomLeu3.chr19 134508 38 - 81552678 GGGCGTGCACTGGGTTTTAGA--AGCCGGGATCCTGGGTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 97601 37 + 80997621 GGGCACGCA-TGGGATTTGGA--AGCCGGGATCCCGGTCC i macFas5.chr16 C 0 M 16729 s papAnu2.chr16 105920 37 + 74645514 GGGCACGCA-TGGGATTCGGA--AGCCGGGATCCCGGGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100264 37 + 75148670 GGGCACGCA-CGGGATTCGGA--AGCCGGGATCCCAGGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910612 37 - 1291538 AGGTGTGCACTGGGGTGTGGA--AGCTGGG-TCCCAGGTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846697 23 + 122082543 -----------------AGGAAGAGCCTGGGTCCACAGCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15669696 30 - 61074082 --------GCTGGGGGGAACA--GGCTGGGATTCAGAGGC i canFam3.chr9 C 0 C 0 e rheMac3.chr16 96980 13 + 80904711 I a score=203986.000000 s hg38.chr17_GL383563v3_alt 188722 120 + 375691 CTCTTGGGCACAGCC---------TGGCCGCCTACAGGACCCTGGTCAGCCTTCCCCTCCTCATCCATCATCGACAGTCCATTCCACCGTCTGTAGCTGCCCTGGAGGCTGCTCTGAGCACCAGCTGGG s panTro4.chr17 173295 120 + 82630442 CTCTTGGGCACAGCC---------TGGCCGCCTGCAGGACCCTGGCCAGGCTTCCCCTCCTCATCCATCATGAACAGTCCATTCCACCGTCTGTAGCTGCCCTGGAGGCTGCTCTGAGCATCAGCTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 70934 118 + 73212453 CTCTTGGGCACAGCC---------TGGCTG-CTACAGGACCCCGGCCAGCCTT-CCCTCCTCATCCATCATGAACCGTCCATTCCACCATCTGTAGCTGCCCTGGAGGCTGCTCTGAGCATCAGCTGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134546 120 - 81552678 CTCTTGGGCACAGCC---------TGGCCGCCTACAGGACCCTGGCCAGCCTTCCCCTCCTCATCCATAGTGAACAGTCGATTCCACCGTCTGTAGCTGCCCTGGAGGCTGCTCTGAGCATCAGCTGGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 105957 120 + 74645514 CTCTCGGGCACAGCC---------TGGCCGCCCACAGGACCCTGGCCAGGCTTCCCCTCCTCATCCGTCATGAGCAGTCGATTCCACCGTCTGTAGCTGCCCTGGAGGCTGCTCTGAGCATCGGCTGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100301 119 + 75148670 CTCTC-GGCACAGCC---------TGGCCGCCCACAGGACCCTGGCCAGGCTTCCCCTCCTCATCCGTCATGAACAGTCGATTCCACCGTCTGTAGCTGCCCTGGAGGCTGCTCTGAGCATCGGCTGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910649 112 - 1291538 CTCTA-CGCACAACC---------CAGTTGCTGAAAGGACCCTGGGCAGACCTCCCGAACTCATCCAGCATGAA----GGACTCCACCACCTGCAGCTGCCCCAGAGGCTGCTCTGAGAATCAGCT--- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75846720 113 + 122082543 --CTC-AGTGCAGCCGGCAGCCTACGGCAGCCTACGTGACCTTGTACAGCTTTCCCGT-CTCATCCATCACGAAGAGTCAATTTCACCATCTGCAGCTGCC------------CTGAGCTTCAAATGAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15669726 69 - 61074082 TTCTTGGCCGCAGCC---------T---------------CTAGGACAGCTTCCCCCTCCTCATCCATC---------------------CTGAAGCTGCCCC---------------CACGGGCTGGC i canFam3.chr9 C 0 C 0 e rheMac3.chr16 96980 13 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M a score=515823.000000 s hg38.chr17_GL383563v3_alt 188842 225 + 375691 TTAGCGGCCATGAGTCACAGAGCG--CTGG---GGCT------AGTACAGCTCGGAGGG-ACTCAGCTCTTCCCGGAA---G-AC--AGGTAGAGGGCGTGGGGTGGGGGCGGC-A------------GGATCACTGGGGAAGGGCGGCCCCGG-CAAACATTTGCGGCCTGAGCTGAACCAGGCTGTTCAACCCACACAGAACCCTCAGGCTTGCTTTCACGCCACCACAAAAAGGACCA----CAGTTTGGAATTTGTA s panTro4.chr17 173415 225 + 82630442 TTAGCGGCCATGAGTCACAGAGCG--CTGG---GGCT------AGTACAGCTCAGAGGG-ACTCAGCTCTTCCAGGAA---G-AC--AGGTAGAGGGCATGGGGTGGGGGCGGC-A------------GGGTCACTGGGGAAGGGCGGCCCCGG-CAAACATTTGCGGCCCGAGCTGAACCAGGCTGTTCAACCCACACAGAACCCTCAGGCTTGCTTTCACCCCACCACAAAAAGGACCA----CAGTTTGGAATTTGTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 71052 237 + 73212453 TTAGTGCCCATGAGTCACAGAGCG--CTGG---GGCT------AGTACAGCTCGGAGGGAACTCAGCTCTTCCAGGAA---G-AC--AGGTAGAGGGCGTGGGGTGGGGGCGGC-AGGTTAGCCAG-GGGGTCACTGGGCAAGGGCGGCCCCGG-CAAACATTTGTGGCTTGAGCTGAACCAGACTGTTCAACCCACACAGAACCCTCAGGCTTGCTTTCACCCCACCACAAAAAGGACCA----CAGTTTGGAATTTTTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134666 236 - 81552678 TTAGCGGCCATGAGTCACAGAGCG--TTGG---GGCT------AGGACAGCTCGGAGGG-ACTCAGCTCTTCCAGGAA---G-AC--AGGTAGAGGGCATAGGGTGGGGGCGGC-AGGTTAGCTGG-GGGGTCACTGAGGAAGGGCGGCCCTGG-CAAACATTTGTGGCCTGAGCTGAACCAGAGTGTGCAACCCACACAGAACCCTCAGGCTTGCTTTCACCCCACCACAAAAAGGACCA----CAGTTTGGAATTTTTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 96993 238 + 80904711 TTAACGGCCGTGAGTCACAGAGCA--CTGG---GGCC------AGCACAGCTCGGAGGG-ACTCGGCTTTTCCAGGAA---G-ACAGAGGTAGAGGGCGTGGGCTGGGGGCGGC-AGGTTAGTGGG-GGGCTCACCGGGGAAGGGCGGCCCCCG-TCAACGTCTGTGGCCTGAGCTGAACCAGACTGTCCAACCCACACAGAACCCTCAAGTTTACGTTCACCCCACCACAAGAAGGACCA----CAGTTTAGGATTTTTA i rheMac3.chr16 I 13 C 0 s papAnu2.chr16 106077 236 + 74645514 TTAATGGCCGTGAGTCACAGAGCG--CTGG---GGCC------AGCACAGTTCGGAGGG-ACTCGGCTTTTCCAGGAA---G-AC--AGGTAGAGGGCGTGGGCTGGGGGCGGC-AGGTTAGTGGG-GGGCTCACCGGGGAAGGGCGGCCCCCG-TCAACGTCTGTGGCCTGAGCTGAACCAGACTGTCCAACCCACACAGAACCCTCAAGTTTACGTTCACCCTACCACGAAAAGGACCA----CAGTTCAGGATTTTTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100420 236 + 75148670 CTAACGGCCGTGAGTCACAGAGCG--CTGG---GGCT------AGCACAGCTCGGAGGG-ACTCAGCTTTTCCAGGAA---G-AC--AGGTAGAGGGCGTGGGCTGGGGGCGGC-AGCTTAGTGGG-GGGCTCACCGGGGAAGGGCGGCCCCGG-TAAACATCTGTGGCCTGAGCTGAACCAGACTGTCCAACCCACACAGAACCCTCAGGTTTACGTTCACCCCACCACGAAAAGGACCA----CAGTTCAGGATTTTTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 910761 240 - 1291538 -----GGCCGTAAACCACAGACCG--CTGG---GGCTGGGACCAGGACAGCTCGGAGGG-ACTCAGCCTTTCCAGAAAGATG-AC--GGGTACAGGGCATGGGGCAGGGGCAGC-AGGTTAGCTGG-GGCCTCACTGGGGAAGGGCAGCCCCAG-TAAACATTTGGGGCCTGAGCTGAACCAGACTGCTCAAGCCACACAGAACCCCCAAGCTTGCTTTCACCCAACTACAGACAGGACCA----CAGTTTAGGATTTCTA i calJac3.chrUn_GL286409 C 0 I 316 s mm10.chr11 75846833 224 + 122082543 ATAATGACCATGAATCACAGGGTGCCCTGGACCAGCC------AGTGCAGCTCCAATG--ACTCGGCTTCTCTAGGAG---GTGC--TGGT--------CCCCCTGGGGGAGGCTAGGTCAGCTGG--GGGTAACTCATTAAGGGCCACCCCTGATAAGCCTCTGCAGAGC-AGCTGAGCCAGACTG-------------GAACCCCAATGCTTGCTTCCACAGGGCAGCAGAGTCTTCCCTGTTTAGGTCAGGATCTTGA i mm10.chr11 C 0 I 1 s canFam3.chr9 15669795 202 - 61074082 -----------------------------------------TGAGCAC---CCACAGAA-CTCCAGCTGTGCCAACAT---G-GC--ACCCAAGGAACGTGGTGGCATAGGGGT-AGGTGGGCCAGCCGGGTTCTTCAGGAAGGCTGGCCCAGGGCAAACATGTGTAGCCTGACTTGAACCAGACCGCTCAGCCCAAGC--AACCCTAAAGCTTGCTTTT-CTGGACTGCAAACAGAACTG----CAGCTGAGGATTTTTA i canFam3.chr9 C 0 C 0 e macFas5.chr16 97638 16729 + 80997621 M a score=253961.000000 s hg38.chr17_GL383563v3_alt 189067 90 + 375691 -AAATCTGTCTAACATCAAGTGAGCCACTGAAGTGATCGTGAAACTC--CCA-------TTTTTCTTAAAACTCCCCACCTGGAACAAATCCAAAACCTG s panTro4.chr17 173640 90 + 82630442 -AAATCTGTCTAACATCAAGTGAGACACTGAAGTGATCGTGAAACTC--CCA-------TTTTTCTTAAAACTCCCCACCTGGAACAAATCCAAAACCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 71289 90 + 73212453 -AAACCTGTCTAACATCAAGTGAGCCACTGAAGTGATCGTGAAACTC--CCA-------TTTTTCTTAAAACTCCCCACCTGGAACAAATCCAAAACCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134902 90 - 81552678 -AAACCTGTCTAACATCAAGTGAGCCACTGAAGTGATCCTGAAACTC--CCA-------TTTTTCTTAAAACTCCCCACCTGGAACAAATCCAAAACCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 97231 90 + 80904711 -AAACCTGTCTGACATCACATGAGCCACTGAAGTGATCGTGAAACTC--CCA-------TTTTCCTTGAAATTCCTCATCTGGGACAAATCCAAAGCCTG i rheMac3.chr16 C 0 I 148 s papAnu2.chr16 106313 90 + 74645514 -AAACCTGTCTGACATCACGTGAGCCACTGAAGTGATCGTGAAACTC--CCG-------TTTTCCTTGAAATTCCTCATCTGGGACAAATCCAAAGCCTG i papAnu2.chr16 C 0 I 25 s chlSab2.chr16 100656 90 + 75148670 -AAACCTGTCTGACATTAAGAGAGTCACTGAAGTGATCGTGAAACTC--CTG-------TTTTCCTTGAAATTCCTCATCTGGGACAAATCCAAAGCCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 911317 89 - 1291538 -aaaaCTGTCTAACATCAAGTGAACCAGTAAAGTGATCATGAAACTC--CCA-------TTTTTCTTAAAAATCCCCAACTGGAACAAATCCGAAAACT- i calJac3.chrUn_GL286409 I 316 C 0 s mm10.chr11 75847058 96 + 122082543 -AACATTGCTTAAAACCTAGT-AGCCGGTGAAGTGGTATCGAAATCC--CAATTTTTTTTTTTTCTTGCAGTTACCCAAATGGAACAAATCCAAAACCCT i mm10.chr11 I 1 C 0 s canFam3.chr9 15669997 93 - 61074082 AAAAATTGCTTAAAATGTAGTGAACCAATGAAGCGATAATGAAACCCCTCTA-------TTTTTCTCAAAACGATCCAACTGGAACAAATCCAAAACCTT i canFam3.chr9 C 0 C 0 e macFas5.chr16 97638 16729 + 80997621 M a score=713.000000 s hg38.chr17_GL383563v3_alt 189157 3 + 375691 TAA s panTro4.chr17 173730 3 + 82630442 TAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 71379 3 + 73212453 GAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134992 3 - 81552678 GAA i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 106428 3 + 74645514 GAA i papAnu2.chr16 I 25 C 0 s chlSab2.chr16 100746 3 + 75148670 CAA i chlSab2.chr16 C 0 C 0 s mm10.chr11 75847154 2 + 122082543 GA- i mm10.chr11 C 0 C 0 s canFam3.chr9 15670090 3 - 61074082 GAA i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 911406 0 - 1291538 C e rheMac3.chr16 97321 148 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M a score=279184.000000 s hg38.chr17_GL383563v3_alt 189160 167 + 375691 GGGAACCAGTGTGTCACC--------------------------------------------------------------------------------CTGTTCTGGAACAGACCTTGAAGGG-AACCGGTATGTCACCCCG---TTCAAAG---CCACCCAGGAGGCCTGCACTCCCCTCTGGGG------AAGGATGGACGGTGGAAGGCGGCAGGATTCCTGCAGAG--AGGC-----CTGAGGAGGGACAATGACCCAGGCCT s panTro4.chr17 173733 167 + 82630442 GGGAACCGGTGTGTCACC--------------------------------------------------------------------------------CTGTTCTGGAGCAGACCTTGAAGGG-AACCGGTGTGTCACCCTG---TTCAAAG---CCACCCAGGAGGCCTGCGCTCCCCTCTGGGG------AAGGATGGACGGTGGGAGGCAGCAGGATTCCTGCAGAG--AGGC-----CTGAGGAGGGACAATGACCCAGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 71382 247 + 73212453 GGGAACCGGCGTGTCACCCTGTTCTGGAACAGACCTTGAAGGGAACCAGTGTGTCACCCTGTTCTGGAACAGACCTCGAAGGGAACCGGCATGTCACGCTGTTCTGGAACAGACCTTGAAGGG-AACCGGTGTGTCACCCTG---TTCAAAG---CTACCCAGGAGGCCTGCGCTCCCCTCTGGGG------AAGGATGGATGGTGGGAGGTGGCAGGATTCCTGCAGAG--AGGT-----CTGAGGAGGGACAATGACTCAGGCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 134995 127 - 81552678 GGGAACCGGTGTGTCACC-------------------------------------------------------------------------------------------------------------------------CTG---TTCAAAG---CAACCCAGGAGGCCTGCGCTCCCCTCTGGGG------AAGGATGGACGGTGGGAGGTGGCAGGATTCCTGCAGAG--AGGC-----CTGAAGAGGGACAATGACCCAGCCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 97469 166 + 80904711 GGGAACCTGTGTGCCACC--------------------------------------------------------------------------------CTGTTCTGGGACAGACCTTGAAGGG--ACCCGTGTGCCACCCTG---TTCAAAG---CCCCCCAGGAGGCCTGCGCTGCCCTCTGGGG------AAGGACAGAGGGTGGGAGGCGGCAGGATTCCTGCACAG--AGGC-----CTGAGGAGGGACGATGACCCAGGCCT i rheMac3.chr16 I 148 C 0 s papAnu2.chr16 106431 167 + 74645514 GGGAACCGGTGTGCCACC--------------------------------------------------------------------------------CTGTTCTGGGACAGACCTTGAGGGG-AACCTGTGTGCCACCCTG---TTCAAAG---CCCCACAGGAGGCCTGCGCTGCCCTCTGGGG------AAGGACGGAGGGTGGGAGGCAGCAGGATTCCTGCACAG--AGGC-----CTGAGGAGGGACGATGACCCAGGCCt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100749 151 + 75148670 GAG-----------------------------------------------------------------------------------------------CTGTTCTGGAAGAGACCGTGAAGGG--AACCGTGTGCCACCCTG---TTCAAAG---CCCCGCAGGAGGCCTGCGCTGCCCTCTGGGG------AAGGATGGAGGGTGGGAGGCGGCAGGATTCCTGCACAG--AGGC-----CTGAGGAGGGACAATGACCCAGGCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 911406 155 - 1291538 -----------TGGAATA--------------------------------------------------------------------------------CTTTTCTGGAAC--------AAGGG-AACCAGTGTGTCACCCTG---TTCAAAG---CCATGTGGGAGGCCTGTGCTCCCCTCCGGTG------AAGGGTGGAGGGTGGGAGGTGGCAGGATCCCTGCAGAGTCAGGCTGTGACCCAGGTCAGGCTATGACCCAGGCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75847156 153 + 122082543 -------AGTACGT------------------------------------------------------------------------------------ACTTTCTGGGGCAGATCTGGAAGGT-AACTAGTATAGCATCTAAGATCTCGAAGGTATCATCTAGGAAGAA-ATACCCAGCTCAGGAG------GACCAGGGCAGGAAGAAGGAAGTGG-----CTGAAGAC--TGGA--------GGGACAGGCTGTGACCTAGGCTT i mm10.chr11 C 0 I 116 s canFam3.chr9 15670093 139 - 61074082 -----------------------------------------------------------------------------------------------GTATTTTTCTGGAACAGACCTTGAAAGTCAACTGGTGTGTAAATCTG---TTCAAAT---C----CAGGAAGCCCCTGCTCTGCTCATGGGCTGCCAGAGGGCGGGAGGTGGGGGAGGGCG---TCCCTGCAGAG--GGAC-----------------AGTGATACAGCCT- i canFam3.chr9 C 0 C 0 e macFas5.chr16 97638 16729 + 80997621 M a score=289018.000000 s hg38.chr17_GL383563v3_alt 189327 132 + 375691 ----CAGAGGAGAAGGGAAAAGGAATTTGCCTCCCAGCC---GGAG----------CTGCCTGTGTCCCAGCCTGGGAGCTTTT---------TGGTTCC-------TCTCTAAGGGC--ATGGACGTGAGGAGGAAATGGGTATTTACACCCTGTGAGCAGGGCTT s panTro4.chr17 173900 132 + 82630442 ----CAGAGGAGAAGGGAAAAGGAATTTGCCTCCCAGCC---GGAG----------CTGCCTGTGTCCCAGCCTGGGAGCTTTT---------TGGTTCC-------TCTCTTAGGGC--ATGGACGTGAGGAGGAAATGGGTATTTACACCGTGTGAGCAGGGCTT i panTro4.chr17 C 0 I 1256 s ponAbe2.chr17 71629 132 + 73212453 ----CAGCGGAGAAGGGAAAAGGAATTTGCCTCACAGCC---AGAG----------CTGCCTGTGTCCCAGCCTGGGAGCTTTT---------TGGTTCC-------TCTCTAAGGGC--ATGGACGTGAGGAGGAAATGCGTATTTACACCCTGTGAGCAGGGCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135122 132 - 81552678 ----CAGTGGAGAAGGGAAAAGGAATTTGCCTCATAGCC---GGAG----------CTGCCTGTGTCCCAGCCTGGGAGCTTTT---------CGGTTCC-------TCTCTAAGGGC--ATGGATGTGAGGAGGAAACACGTATTTACACCCTGTGAGCGGGGCTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 97635 132 + 80904711 ----CAGCAGAGAAAGGAAAAGGAATTTGCCTCACAGCC---GGAG----------GTGCCTGTATCCCACCCTGGGAGCTTTT---------TGGTTCC-------TCTCTACGGGC--ATGGACGTGAGGAGGAAATGGGTATTTACACCCTGTTAGCAGGGCTT i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 106598 133 + 74645514 ----cagcagagaaaggaaaaggaatttgCCTCACAGCC---GGAG----------GTgcctgtaccccagcctgggagcTTTC---------TGGTTCC-------TCTCTACGGGCGTGTGGACGTGAGGAGGAAATGGGTATTTCCA-CCTGTTAGCAGGGCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 100900 127 + 75148670 ----CAGCAGAGAAAGGAAAAGGAATTTGCCTCACAGCC---GGAG----------GTGCCTGTACCCCAGCCTGGGAGCTTTT---------TGGTTCC-------TCTCTACGGGC--GTGGACGTGAGGAGGAAATGGGTATTTACATATTGTTAGCAG----- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 911561 118 - 1291538 ----CCACAGAGAAGGGAAAAGGAATTTGCCTCACAGCC---AGAG----------CTGCCTGTGTCCCCACT--GGGGCTTTT---------TGGTTCC-------TCTCTAAGGGC--ATGG------------AATAGGGTTTTACACCCCATGAGTGGGGCTT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15670232 163 - 61074082 CATGGAGATGGGATGGGAAAGTGCACTTGCTCCATGGCCATGGGAGCTTTAGAGGTCTGCTTTTGCCTCAGCCAGGGGCCTTTTGGCCTACCATGGTTTCTTATCCATCTTGGAGGAG--ATGGA-GTG-GGAGGAAATGGGTATTTGTACCCTGTGGGTAGGGCTT i canFam3.chr9 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e macFas5.chr16 97638 16729 + 80997621 M a score=633551.000000 s hg38.chr17_GL383563v3_alt 189459 289 + 375691 -------TTGATGGTGCTGGGCAAAGTGGAGAGGCCTCCCCAAATCTGGCCAGGCCACAGCCCAGTGAC-AAGGCTTTCAATGAT---------------------ACCCCAGGATCCCAGGC----CGAGGTCCACATGGTAAAACCTCATGAATCCAGAGGTC----------CTGGCCCCCACCTGAG----------------------AGCCCTCTGAACACT-------------------GGCT-------TCAGGCCCCTGGTGTCAGGCGCTCAGTCACAATTGAGAAAGGC-AGgcaga--aatgacacagcaggccaggtgcggtggctcatgcctgtagtaccagaattttgggaggctgagccagacaga s panTro4.chr17 175288 289 + 82630442 -------TTGATGGTGCTGGGCAAAGTGGAGAGGCCTCCCCAAATCTGGCCAGGCCACAGCCCAGTGAC-AAGGCTTTCAATGAT---------------------ACCCCAGGATCCCAGGC----CGAGGTCCACATGGTAAAACCTCATGAATCCAGAGGTC----------CTGGCCCCCTCCTGAG----------------------AGCCCTCTGAACACT-------------------GGCT-------TCAGGCCCCTGGTGTCAGGCGCTCAGTCACAATTGAGAAAAGC-AGGCGGA--AATGACATAGCAggccgggtgcggtggctcatgcctgtagtaccaggactttgggaggctgagccaggcaga i panTro4.chr17 I 1256 C 0 s ponAbe2.chr17 71761 289 + 73212453 -------TTGATGGTGCTGGGCAAAGTGGAGAGGCCTCCCCAAATCTAGCCAGGCCACAGCCCAGTGAC-AAGGCTTTCGATGAT---------------------ACCACAGGATCCCAGGC----CGAGGTCCACATGGTAAAACCTCATGAATCCAGAGGTC----------CTGGCCCCCACCTGAG----------------------AGCCCTCTGCACACT-------------------GGCT-------TCAGGCCCCTGGTGTCAGGCACTCAGTCACAATTGAGAAAGGC-AGGGAGA--AATGACACAGCAggccaggtgcggtggctcacacctgtagtaccagaactttgggaggctgagctgggcgga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135254 310 - 81552678 -------TTGATGGTGCTGGGCAAAGTGGAAAGGCCTCCCCAAATCTGCCCGGG-CACAGTCCAGTGAC-AAGGCTTTGGATGAT---------------------ACCCCAGGATCCCAGGC----CGAGGTCCACATGGTAAAACCTCATGAATCCAGAGGCC----------CTGGCTCCCACCCGAGGAAAGGACACATGTCCCAGAAAAGCCCTCTGAACACT-------------------GGCT-------TCAGGCCCCTGGTGTCAGGCGCTCAGTCACCATTGagaaaggc-aggcaga--aaggacacagcaggccaggtgcggtggctcacgcctgtagtaccaggacttcgggaggctgagccgggcgga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 97767 310 + 80904711 -------TTTATGGTGCTGGGCAAAGTGGGAAGGCCTCCCCACATCTGGCCAGGCCACAGCCCAGTGAC-AAGGCTTTCGAAGAT---------------------ACCCCAGGATCCCGGGC----CGAGGTCCACATGGTAAAACCTCACGAATCCAGAGGTC----------CTGGCTCCCACCTGAGAGAAGGACACGTGTCCCAG-AAAGCCCTCTGAACACG-------------------GGCT-------TCAGGCCCCTGGTGTCAGGCACTCGGTCGCACTTGAGAAAGGC-AGACGGA--AATGACACAGCAggccaggtgcggtggctcacacctgtagcaccagaattttgggaggctgagccgggcgga i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 106731 311 + 74645514 -------TTTATGGTGCTGGGCAAAGTGGGAAGGCCTCCCCAAACCTGGCCAGGCCACAGCCCAGTGAC-AAGGCTTTCGAAGAT---------------------ACCCCAGGATCCCGGGC----CGAGGtccacatggtaaaacctcatgaATCCAGAGGTC----------CTGGCTCCCACCTGAGAGAAGGACACGTGTCCCAGAAAAGCCCTCTGAACACA-------------------GGCT-------TCAGGCCCCTGGTGTCAGGCACTCAGTCGCAGCTGAGAAAGGC-AGACAGA--AATGACAgagcaggccaggtgtggcggctcacacctgcaataccagaattttgggaggctgagccgggcgga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 101027 285 + 75148670 -------------------------------AGGCCTCCCCAAATCTGGGCAGGACACGGCCCAGTGAC-AAGGCTTTCGAAGAT---------------------ACCCCAGGATCCTGGGC----CGAGGTCCACATGGTAAAACCTCATGAATCCAGAGGTC----------CTAGCTCCCACCTGAGAGAAGGACACGTGTCCCAG-AAAAACCTCTGAACACG-------------------GGCT-------TCAGG-CCCTGGTGTCAGGCACTCAGTCGCAGTTGAGAAAGGC-AGACAGA--AATGACAGAGCAggccaggtgcggtggctcacacctgtagcaccagaattttgggaggctgagccgggcgga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 911679 312 - 1291538 -------TTGATGGTGCTGGGCAACATGATAGGGCCTCCCCAAATCTGCTCAGGCCACA-CCCAGTGAC-ACAGCTTTC-ATGAC---------------------ACC-CAGGATCTCAGGCAGAGAGAGGTCCACAGGGTGAAACCTCATGAACCCAGAGGTC----------CTGGCTCCTACCTGAGAAGAGGACGCATGTCCAG--AAAGGCCTCTGAACGCT-------------------GGATGCTGGTGTCAGGCCCCTGCTGCCAGG--CTCAGCCATAGCAGAGAAAGGC-GGCCAGA--AACGATGGAGCAGG-CAGgt--gggggctcacacctgtgataccataactttgggaggctgagccaggcaga i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15670395 359 - 61074082 TATGGGGTCTAGGGTGGAAGGCAAAATGAAAGGGCCTCCCTA-ATCCGGCCAGGCCACAGGGCAGTGATGAAGGCTTTAGACAAGGGGTCCCCTCCCACCTGCCCAGCCCCAGGCTCCCAGGG----AGAGGCTAACACAGCAAAGCTTCCC-AAGCCAG-GGTCACTCATCTCTCTGGTTCCCATCTGAGAAAAGTATACAGATCCTAG-GAAGCCCTGTGAACAGTATATGGACTCTAGACTCAGGGCT-------TCAGGCCTCTAATTTCAGGAGCTCAGACCCACTTGGGTAGGTTGGGGCAGACCAATCACAGAGCAGATCCAGAGTAATGT----TGCCTCTAGT--CAGAGGT---GGAGGCTGAAGAAAATAAG i canFam3.chr9 C 0 I 144 e mm10.chr11 75847309 116 + 122082543 I e macFas5.chr16 97638 16729 + 80997621 M a score=404403.000000 s hg38.chr17_GL383563v3_alt 189748 213 + 375691 tgacttgagcccaagagttcaagaccaggcctggacaacgtggaatcaccccgtctctacagatacaaaaaaaattagcaggtgcggtggtacatggccagctacttgggaggcagaggtgggaggattgcttgagtccgggaagtc--gtgtgcagttagctgagactgagccactgtactccactccagcctaggtgacagagtgaaaccct------g s panTro4.chr17 175577 212 + 82630442 tgacttgagcccaagagttcaagaccaggcctggactacgtggaatcaccccgtctctacagatac-aaaaaaattagcaggtgcggtggtacatggccagctacttgggaggcagaggtgggaggattgcttgagtctgggaagtt--gtgtgcagttagctgagactaagccactgtattccactccagcctgggtgacaaagtgaaaccct------g i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72050 209 + 73212453 tcacttgagcccaagagttcaagaccaggcctggacaacgtggaagcacccggtctctacagatacaaaaaaaattagcaggtgtggtagtacatggccagctacttgggaggc------gggaggattgcttgagcccgggaagtcgagtgtgcagttagctgaaactgagcgactatactccactccagcctgggtgacagagtgaaaccct------g i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135564 213 - 81552678 tcacttcagcccaagagttcgagacca-gcctgggcaacgtggaagcaccccgtctctacagacac-aaaaaaattagcaggtgcggtagtacatggccagctacctgggaggt------gggaggattgctgcagccccggaagtggagtgtgcagttagctgagactgagccactgtattccactccagcctgggtgacagagtgaaaccctgtcaaag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 98077 208 + 80904711 tcccttgagctcaagagttcgagacca-gcctgggcaacgtggaagcacctcatctctgcaaatac-aaaatcattagccggtgcggtagcacacggccagctactggggaggcggaggtgggaggattgctcgagcccgggaagctgagtgtgcagtttgctgagactgagccgctg-----cactccagccggggtgacggagtgaaaccct------g i rheMac3.chr16 C 0 I 54 s papAnu2.chr16 107042 208 + 74645514 tcccttgagctcaagagttcgagacca-gcctgggcaacgtggaaGCACCTCATCTCTGCAAATAC-AAACTCATCAGCAGGTGCGGTAGCACAcggccagctactggggaggcggaggtgggaggattgctcgagcccggGAAGCCGAGTGTGCAGTTCGCTGAGACggagccgctg-----cactccagccggggtgacggagtgaaaccct------g i papAnu2.chr16 C 0 I 6 s chlSab2.chr16 101312 208 + 75148670 tcccttgagctcaagagttcgagacca-gcctgggcaacgtggaagcacctcgtctctgcaaatac-aaaatcattagcaggtgcggtagcacatggccagctactggggaggcggaggtgggaggactgctcgagcccgggaagccgagtgtgcagttcgctgagactgagccgctg-----cactccagccggggtgacggagtgaaaccct------g i chlSab2.chr16 C 0 I 57 s calJac3.chrUn_GL286409 911991 193 - 1291538 tcacttgagcccaagaattcaagatca-gcctgggcaacagggaagaaccccatctc----------------attagcaggtgtggtagtacatgcccagctacttgggaggtggaggtgggaggattgcttgagcccgggaagtcgagcatgcagttagctgagactgagccgctg-----gacgccagcctgaatgacagagtgaaaccct------g i calJac3.chrUn_GL286409 C 0 I 6 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670754 144 - 61074082 I e macFas5.chr16 97638 16729 + 80997621 M a score=10628.000000 s hg38.chr17_GL383563v3_alt 189961 18 + 375691 -agaaagaaagaaaagaaa s panTro4.chr17 175789 18 + 82630442 -agaaagaaagaggagaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72259 18 + 73212453 -agaaagaaagaaagaaag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135777 18 - 81552678 -agaaagaaagaaagaaaa i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 912190 18 - 1291538 aaaaaaaaaagaaagaaa- i calJac3.chrUn_GL286409 I 6 C 0 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670754 144 - 61074082 I e chlSab2.chr16 101520 57 + 75148670 I e papAnu2.chr16 107250 6 + 74645514 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M a score=407.000000 s hg38.chr17_GL383563v3_alt 189979 6 + 375691 gaaaga s panTro4.chr17 175807 6 + 82630442 gaaaga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72277 6 + 73212453 aaagag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135795 5 - 81552678 gaaa-a i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670754 144 - 61074082 I e calJac3.chrUn_GL286409 912208 0 - 1291538 C e chlSab2.chr16 101520 57 + 75148670 I e papAnu2.chr16 107250 6 + 74645514 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M a score=18742.000000 s hg38.chr17_GL383563v3_alt 189985 27 + 375691 agagagaaagagagaga-gagagaaaga s panTro4.chr17 175813 27 + 82630442 agagagaaagagggaga-gagagaaaga i panTro4.chr17 C 0 I 601 s ponAbe2.chr17 72283 28 + 73212453 agagacagagagagagaggagagaggga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135800 27 - 81552678 agaaagaaagagagaga-gagagacaga i nomLeu3.chr19 C 0 C 0 s canFam3.chr9 15670898 27 - 61074082 agagagagagagagaga-gagaggcaga i canFam3.chr9 I 144 C 0 e mm10.chr11 75847309 116 + 122082543 I e calJac3.chrUn_GL286409 912208 0 - 1291538 C e chlSab2.chr16 101520 57 + 75148670 I e papAnu2.chr16 107250 6 + 74645514 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M a score=3131.000000 s hg38.chr17_GL383563v3_alt 190012 37 + 375691 aaggaaggaaga-gaaaggaagaggaagg--------aaggaagga s ponAbe2.chr17 72311 38 + 73212453 gagagagagagaggaaaggaaggaagagg--------aaggaaggg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135827 37 - 81552678 aagaaagaaaaa-gaaagaaaggaaagag--------agagagaga i nomLeu3.chr19 C 0 C 0 s canFam3.chr9 15670925 37 - 61074082 ----gacacagg-cagagggagaagcaggcctcctgtgggga---- i canFam3.chr9 C 0 I 191 e mm10.chr11 75847309 116 + 122082543 I e calJac3.chrUn_GL286409 912208 0 - 1291538 C e chlSab2.chr16 101520 57 + 75148670 I e papAnu2.chr16 107250 6 + 74645514 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e panTro4.chr17 175840 601 + 82630442 I a score=8359.000000 s hg38.chr17_GL383563v3_alt 190049 64 + 375691 gaaaagaaaagagggagggacagaaagagagagagaaagagaaaaagagagagagagaaagaaa s ponAbe2.chr17 72349 54 + 73212453 gaaaagaaaagagagagggacagaaagagagaaag----------agagagagagagaaagaAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 135864 51 - 81552678 gaaaagaaaa---agaaagaaagaaaggaaaaaga----------agaaaggaaggaaaagaaa i nomLeu3.chr19 C 0 I 441 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670962 191 - 61074082 I e calJac3.chrUn_GL286409 912208 0 - 1291538 C e chlSab2.chr16 101520 57 + 75148670 I e papAnu2.chr16 107250 6 + 74645514 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e panTro4.chr17 175840 601 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 190113 28 + 375691 agcaacaaaatgaaacgaaactccagaa e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670962 191 - 61074082 I e calJac3.chrUn_GL286409 912208 0 - 1291538 C e chlSab2.chr16 101520 57 + 75148670 I e papAnu2.chr16 107250 6 + 74645514 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I e ponAbe2.chr17 72403 0 + 73212453 C e panTro4.chr17 175840 601 + 82630442 I a score=1197.000000 s hg38.chr17_GL383563v3_alt 190141 14 + 375691 agagagagagaaag s panTro4.chr17 176441 14 + 82630442 agaaagagagaaag i panTro4.chr17 I 601 C 0 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670962 191 - 61074082 I e calJac3.chrUn_GL286409 912208 0 - 1291538 C e chlSab2.chr16 101520 57 + 75148670 I e papAnu2.chr16 107250 6 + 74645514 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I e ponAbe2.chr17 72403 0 + 73212453 C a score=5575.000000 s hg38.chr17_GL383563v3_alt 190155 32 + 375691 agaaaaagagagagagagaaa----agaaaagaAAC s panTro4.chr17 176455 36 + 82630442 agaaaaagagagagagagaaagaaaaggaaagaAAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72403 16 + 73212453 ----------------AGAAA----AGAAACTAAAA i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 107256 32 + 74645514 agggagggagggagggaggga----agaaaataaaa i papAnu2.chr16 I 6 C 0 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670962 191 - 61074082 I e calJac3.chrUn_GL286409 912208 0 - 1291538 C e chlSab2.chr16 101520 57 + 75148670 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I a score=4434.000000 s hg38.chr17_GL383563v3_alt 190187 9 + 375691 GA-------AACTCCA s panTro4.chr17 176491 9 + 82630442 GA-------AACTCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72419 9 + 73212453 GA-------AACTCCA i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 107288 16 + 74645514 gaaggaactAACTCCC i papAnu2.chr16 C 0 I 4 s calJac3.chrUn_GL286409 912208 9 - 1291538 ga-------aaCTACA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670962 191 - 61074082 I e chlSab2.chr16 101520 57 + 75148670 I e rheMac3.chr16 98285 54 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I a score=74795.000000 s hg38.chr17_GL383563v3_alt 190196 44 + 375691 GGGCAGACCTAGGCAGCGGTGCCTGCGGGTCACAGCTCTGGAGG s panTro4.chr17 176500 44 + 82630442 GGGCAGACCTAGGCAGCGGTGCCTGCAGGTCACAGCTCTGGACG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72428 44 + 73212453 GGGCAGACCTAGGCAGCGGTGCCTGCGGGTCACAGCTCTGGAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 98339 44 + 80904711 GGGCCGACCCAGGCAGCGGTGCCGCTGGGTCACAGCTCTGGAGG i rheMac3.chr16 I 54 I 79 s papAnu2.chr16 107308 44 + 74645514 GGGCCGACCCAGGCAGCGGTGCCGCTGgatcacagctctggagg i papAnu2.chr16 I 4 C 0 s chlSab2.chr16 101577 44 + 75148670 GGGCAGACCCAGGCCGCGGTGCCGCTGGGTCACAGCTCTGGAGG i chlSab2.chr16 I 57 I 79 s calJac3.chrUn_GL286409 912217 44 - 1291538 GGGCAGACCTAGGCAGTGGTGCCTCCGGGTCACAGCTCTGGAGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670962 191 - 61074082 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I a score=40175.000000 s hg38.chr17_GL383563v3_alt 190240 81 + 375691 TTGAAG---AGAAGAAGCCGCATCCTGTTAACTGTCCTCGGCGTTGGAGGCAG---AGAACAACGT-CCACCTGAGAATCGCTTCCGC s panTro4.chr17 176544 82 + 82630442 TTGAAG---AGAAGAAGCCGCATCCTGTTAACTGTCCTCGGCGTTGGAGGCAG---AGAACAACGTTCCATCTGAGAATCGCTTCCGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72472 85 + 73212453 TTGAAGAGAAGAAGAAGCCGCATCCTGTTAACTGTCCTTGGCGTTGGAGGCAG---AGAACAACGTTCCATCTGAGAATCGCTTCCGT i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 107352 52 + 74645514 ------------------------ctgctAACTGTCCTCGGCATCGGAGGC------GAAGAACGTTCCATCTGAGAATCCA------ i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 912261 88 - 1291538 CTGAAGAGAATATGAAGGCACGTCCCATGAACTGTCCTCGGCATTGGAGGTAGAAAAGAACAACGTCCCATCTGAGAATCACTTCCAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e canFam3.chr9 15670962 191 - 61074082 I e chlSab2.chr16 101621 79 + 75148670 I e rheMac3.chr16 98383 79 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I a score=5883.000000 s hg38.chr17_GL383563v3_alt 190321 9 + 375691 GCGTAGTGA s panTro4.chr17 176626 9 + 82630442 GCGTAGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72557 9 + 73212453 GCGTAATGA i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 107404 9 + 74645514 GCGTAACGA i papAnu2.chr16 C 0 I 18 s calJac3.chrUn_GL286409 912349 9 - 1291538 ACATAACGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15671153 9 - 61074082 GCTTGATTT i canFam3.chr9 I 191 C 0 e mm10.chr11 75847309 116 + 122082543 I e chlSab2.chr16 101621 79 + 75148670 I e rheMac3.chr16 98383 79 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I a score=110705.000000 s hg38.chr17_GL383563v3_alt 190330 68 + 375691 CTCCAG------------------CCGCGCCTTTATCGTTCTTCCTTTCTTTACAgtgacagctggaactgcagcacccatcttgt s panTro4.chr17 176635 86 + 82630442 CTCCAGGCAGCTTTGCTCCTCCAGCCGCGCCTTTATCGTTCTTCCTTTCTTTACAgtgacagctggaactgcagcacccatcttgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72566 86 + 73212453 CTCCCAGCAGCCTTGCTTCTCCAGCCGCACCTTTATCGTTCTTCCTTTCTTTACAATGACAGCTGGAACTGCAGCACCCATGTTGT i ponAbe2.chr17 C 0 I 49 s rheMac3.chr16 98462 65 + 80904711 ------------------CTCCAGCCACGCCTCTATCG---TTCCCTTCTTTACAGTGACAGCTGGAACTGCAGCACCCGTCTTGC i rheMac3.chr16 I 79 C 0 s papAnu2.chr16 107431 65 + 74645514 ------------------CTCCAGCCACGCCTCTATCG---TTCCCTTCTTTACAGTGACAGCTGGAACTGCAGCACCCGTCTTGC i papAnu2.chr16 I 18 C 0 s chlSab2.chr16 101700 65 + 75148670 ------------------CTCCAGCCACGCCTCTATCG---TTCCCTTCTTTACAgtgacggctggaactgcggcacccgtcttgt i chlSab2.chr16 I 79 C 0 s calJac3.chrUn_GL286409 912358 81 - 1291538 CTCCAGCCAGGCTTGCTCTTCCAGCCGCCCTTTCACC----TTCCTTTCTTTATAGTGACAGCTGGAACTG-AGCACCCATCGTGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15671162 65 - 61074082 ------------------TTCAGGCTCCCCTTTTAACT---TTCTTCCATTTATAAtgatggctggaactgcagcaaccatcttgt i canFam3.chr9 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I a score=153675.000000 s hg38.chr17_GL383563v3_alt 190398 153 + 375691 gaccatgagggaaAGA-GAAGAATTGCAAAGACATCTGTCCTGACATCACTGAAGCTGCTGAACCGAAGCCGTGGCTCCTTCCTCTGAGCTTCGTATTTTATGAGAAAAAGATGTACTCTTTCGCTACTCAAGTATGCCATGTTGATGTGGCTA s panTro4.chr17 176721 153 + 82630442 gaccatgagggaaAGA-GAAGAATTGCAAAGACATCTGTCCTGACATCACTGAAGCTGCTGAACCGAAGCCGTGGCTCCTTCCTCTGAGCTTCGTATTTTAGGAGAAAAACATGTACTCTTTCGCTACTCAAGTATGCCATGTTGATGTGGCTA i panTro4.chr17 C 0 C 0 s rheMac3.chr16 98527 150 + 80904711 AACCATGAGGGAAACA-GAAGAATTCCAAAGACGTCTGTCCTGGCGTCGCTG-AGCTGCCGAACCAAAGCCGTCGCTCCTGCCTCTGAGCTCCGTATTTTATCAGGAAAAGATGTACTC--TCGCTACTCAGATATGCCAGGTTGGTGTGGCTA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 107496 150 + 74645514 GACCATGAGGGAAACA-GAAGAATTGCAAAGACGTCTGTCCTGGCGTCGCTG-AGCTGCCGAACCGAAGCCGTCGCTCCTGCCTCTGAGCTCCGTATTTTATCAGGAAAAGATGTACTC--TCGCTACTCAGATATGCCAGGTTGGTGTGGCTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 101765 150 + 75148670 gaccatgagggaaACG-GAAGAATTGCAAAGACGTCTGTCCTGGCGTCGCTG-AGCTGCCGAACCGAAGCCGTCACTCCTGCCTCTGAGCTCCGTATTTCATCAGGAAAAGATGTACTC--TCGCTACTCAGATATGCCAGGTTGGTGTGGCTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 912439 134 - 1291538 GAACATGAGGGAAAGACCAAGAATTGCAAAGACATCTGTCCTGACATCGCCA--------------------TCATTCCTTCCTCTACGCTTCATATTTTACAAGAAAAAGATGGATTATTTTGCTGCTCGAACATGCCAGGTTGACATGGTTA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15671227 105 - 61074082 gaccatgagggaaAGG---------------------------GCATTACGG-AGCTGCTGAACCAAAGTTGTGGGCGCCTTCTCTAAACTTTCTAACATATGACCAGAAAA-GTAATC--TGATTAATATGGTAC------------------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 135915 441 - 81552678 I e ponAbe2.chr17 72652 49 + 73212453 I a score=493294.000000 s hg38.chr17_GL383563v3_alt 190551 302 + 375691 CTTTCACCTCCCACCCCCAGCAGCTCTCTCTCTGTGCACAG------GGTGGAAATCCAGCTTGAAGGCAAGAAGCCTG----------------------------------------------------------------TGGAGGGGATGAACCCAGCTCTAAAGGTGTTACA-CCCCGGGGCCCACAGCACCGGTGCCGCCATTTACACCTCATATACCACAGGGGACCTCAGGGACCAGGCCCT--ATGCAAAAGCTGACTTT----ACTGCTGTCATATAT---GAGCAATGGTATGCCA-GGAAGAGCAGGGGAGAGCA-------CACACTGTCTGCAGGGATCAGGTGGAGGGGGAGAGACATCGCTCAGAGGCAGAC--------CC s panTro4.chr17 176874 300 + 82630442 CTTTCAACTCCCACCCCCAGCAACTCTCTCTCTGTGCACAG------GGTGGAAATCCAGCCTGAAGACAAGAAGCCTG----------------------------------------------------------------TGGAGGGGGTGAGCCCAGCTCTAAAGGTGTTACAACCCCGGGGCCCACAGCACCGGTGCC---ATTTACACCTCATATACCACAGGGGACCTCAGAGACCAGGCCCT--ATGCAAAAGCTGACTTT----ACTGCTGTCATATAT---GAGCAATGGTATGCCA-GGAAGAGCAGGGCAGAGCA-------CACACTGTCTGCAGGGATCAGGTGGAGGGGGAGAGACATCGCTCAGAGGCAGAC--------CC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 136356 304 - 81552678 CTGTCGTCTCCCACCCCCAGCAACTCTCTTTCTGTGCACAG------GGTGGAAATCCAGCTTGAAGGAAAGAAGCCTG---------------------------------------------------------------CCTGATTGGGTGAGCCCAGCTCTAAAGGTGTTACAACCCCAGGGCCCGCAGCACCGGTGCCGCCATTGACACCTCCTATACCACAGGGGACCAAAGAGACCAGGACGT--GTGCAAAAGCTGACTTT----ACTGCTGTCATATAT---GAGCAATGATGTACCA-GGAAGAGCAGGGCAGAGCA-------CACACTGTCTGCAGGGAGCAGGTGGAGGGGGAGAGACATTGCTCAGAGACAGAC--------CC i nomLeu3.chr19 I 441 C 0 s rheMac3.chr16 98677 305 + 80904711 CTCTCAAGTCCCACCCCCAGCAGCTCTCTCTCTGTGCATAG------GGGAGGGATCCAGCTCGAAGGAAAGAAGCCTG----------------------------------------------------------------CAGAGGGGCTGAGCCCAGCTCTAACGGTGTCACAACCCCAGGACCTGCAGCACCGGTGCCACCGTTTACACCTCATGTACCACAGGGGACCGAAGAGACCAGGTCGCATATGCAAAAGCTGACTTT----ACTGCTGTCATATAC---GCGCAACGACGTGCCA-GGAAGGGCAGGGCAGAGCA-------CACGCTGTTGGCAGGGATCGGGTGGAGGGGGAGAGACACTGCTCAGAGGCAGAC--------CC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 107646 303 + 74645514 CTCTCAAGTCCCACCCCCAGCAGCTCTCTCTCTGTGCATAG------GGTAGGAATCCAGCTCGAAGGAAAGAAGCCTG----------------------------------------------------------------CAGAGGGGCTGAGCCCAGCTCTAACGGTGTCACAACCCCAGAACCTGCAGCACCGGTGCCACCATTTACACCTCATATACCACGGGGGACCGAAGAGACCAGGCCGC--ATGCAAAAGCTGATTTT----ACTGCTGTCATATAC---GCGCAACGATGTGCCA-GGAAGGGCAGGGCAGAGCA-------CACGCTGTTGGCAGGGATCGGGTGGAGGGGGAGAGACACTGCTCAGAGGCAGAC--------CC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 101915 303 + 75148670 CTCTCAAGTCCCAGCCCCAGCAGCTCTCTCTCTGTGCACAG------GGTAGGAATCCAGCTCGAAGGAAAGAAGCCTG----------------------------------------------------------------CAGAGGGGCTGAGCCCAGCTCTAACGGTGTCACAACCCCAGGACCTGCAGCACCGGTGCCACCGTTTACACCTCATGTACCACAGGGGACCGAAGAGACCAGGCCGC--ACGCAAAAGCTGACTTC----ACTGCTGTCATATAC---ACACAACGATGTGCCA-GGAAGGGCAGGGCAGAGCA-------CACACTGTTGGGAGGGATCAGGTGGAGGGGGAGAGACACTGCTCAGAGGCGGCT--------CC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 912573 380 - 1291538 CTCCCAACTCCCA--CCCAGCAAATCTCTCTC--TGCATAG------GGTGGG-ATCCGGCTCGAAGGAAAGAAGCCTCAGAGGGGTGAGCCCAGCTCTAAAGGTATTCCAACCCCAGACCCCACAGCACTGAAAAGAAGCCTCAGAGGGGGTAAGCCCAGCTCTAAAGGTATTCCAACCCCAGACTCCACAGCACTGGTGCCTCCATTTATACCTCATATACCACAGGGGAGCTAAGAGACCAGGCTGC--AAGAAAAAGCTGACTCC----ACTGCTGTCATAAACCCGGAGCAATGATATGCCA-GGAAGAGTAGGGCAGAACACATACTGCACACTGCCTGCAGGGATCAGGTGGAGGGGGAGAAAGGTCACTTAGAGGCAGCCAGGTCAGACC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15671332 314 - 61074082 -CCACCACCACTACTGCCAGCAAATACCTCT--GTACATAGCCCAAAGGTGGGAATCCAGCTCAAAGGAAAGAAGTTTG----------------------------------------------------------------CTGAAGAAGTGGGCCGAGCTCTACAGCAATAAAGACCCAAGAACCCACAGTACTGGTTCTACATTTTACACCTTTTATTTCACAGGGGAACAATGAGACTCACGAGT--GTGCAAAAGCTGGCTTTGGTCATTGTTGCCATACACTTGGAGCAATGATCTGCCACTGAAAAGTAGTATGTAACACGCA---CACTCCATTTAGACTGATCAAGTGGGAGGGTGG--ACCTCTCCCAGAAGTATGC---------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75847309 116 + 122082543 I e macFas5.chr16 97638 16729 + 80997621 M e ponAbe2.chr17 72652 49 + 73212453 I a score=248450.000000 s hg38.chr17_GL383563v3_alt 190853 147 + 375691 TGTGACCAGGT--ACCAAGAGGTACTCAGGCCAGGCCGTTCCCCACCC-------------------CCTCCTGGGGAAAGAAGGAATACCCTGCTG----------------GGACCCACCAAGGGGTCTGCAGGCAACTCCTTGGCCAAAATCAATACCCAGCGTCCAGGGGAGGGAGAGAG s panTro4.chr17 177174 147 + 82630442 TGTGACCAGGT--ACCAAGAGGTACTCAGGCCAGGCCGTTCCCCATCC-------------------CCTCCTGGGGAAAGAAGGAATACCCTGCTG----------------GGACCCACCAAGGGGTCTGCAGGCAACTCCTTGGCCAAAATCAATACCCAGCGTCCAGGGGAGGGAGAGAG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 136660 146 - 81552678 TGCGGCTAGTT--ACCAAGAGGTACTCAGGCCATGCCATTCCCCACCC-------------------CCTCCTGGGGAAAGAAGGAATACCCTGCTG----------------GGACCCACCAAGGGGTCTGCAGGCAAATCCTT-GCCAAAATCAATACCCAGCGTCCAGGGGAGGGAGACAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 98982 147 + 80904711 TGGGGCCAGGT--ACCAACAGGGACTCAGGCCATGCCGTTCCCCGACC-------------------CCTCCTGGGGAAAGAAGGGATGCCCTGCTG----------------AGACCCACCGGGGGGTGTGTAGGCAAATCCTGGGCCAGAATCAATACCCAGCGTCCAGGGGAGGGAGAGAG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 107949 146 + 74645514 TGGGGCCGGGT--ACCAAGAGGGACTCAGGCCATGCCGTTCCCCGACC-------------------CCTCCTGGGGAAAGAAGGAATGCCCTGCCG----------------AGACCCACCgggggg-gTGCAGGCAAATCCTCGGCCAGAATCAATACCCAGCgtccaggggagggagagag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 102218 146 + 75148670 TGGGGCCGGGT--ACCAAGAGGGACTCAGGCCATGCTGTTCCCCGACT-------------------CCTCCTGGGGAAAGAAGGGATGCCCTGCTG----------------AGACCCACCAGGGGG-GTGCACGAAAATCCTCGGCCAGAATCAATACCCAGCGTCCAGGGGAGGGAGAGAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 912953 128 - 1291538 TAGGGCCAGGC--ACC-----------------TGCCGTTCTCCACCG-------------------GCTCCTGGGGAAAGAAGGAATGGGTGGCTG----------------GG-CTCACCAAGGGGTTTGCAGGCAGATCCTTGGCCAACATCAACACCCAGTGCCCA-GGGAGGGACAGAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75847425 171 + 122082543 TGCCACTTGAA--ACCAGGTGGCACACAAGGCTGGCCTTACCTGACCCTGAGGCTTCCTTGAAGCCTCCTCCTGGTGTGAGAGCCAGAGTCTCACTGTGGAT-----------GGGCCTCCCTGGGGTCACTAACTGGCATCCTTGCCATAAATCAGTACCTCAGACCCAGAGGAGCAAGGATG i mm10.chr11 I 116 C 0 s canFam3.chr9 15671646 158 - 61074082 -------AGGTCACCCCAGGGCCACTCAGGTCACACTGTTCCCTACCC-------------------CATTCTGGGGAAAGAACGAATGACCTGGTATAAGCAAGCTTGCAGAGGGCTCACTGAGGGGTCTACAGGCAAATGCTTGCCCCACAGGAATACCCACTGTCCAGAAGAGGAAGAGAG i canFam3.chr9 C 0 C 0 e macFas5.chr16 97638 16729 + 80997621 M e ponAbe2.chr17 72652 49 + 73212453 I a score=150619.000000 s hg38.chr17_GL383563v3_alt 191000 112 + 375691 CAGCAAACTCAGGTAGTCAGCGCACCTGTCCTGCAGGTGCAGTGCAGTCACTGGGTCTCCCTGAGATAACACAGAGGACAGGAACACGTCTACTCTTTCCCTAATACTTTCA s panTro4.chr17 177321 112 + 82630442 CAGCAAACTCAGGTAGTCAGCGCACCTGTCCTGCAGGTGCAGTGCAGTCACTGGGTCTCCCTGAGATAACACAGAGGACAGGAACACATCTACTCTTTCCCTAATACTTTCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 136806 112 - 81552678 CAGCAAACTCAGGTAGTCAGCGCACCTGTCCCGCAGGTGCAGTGCAGTTCTTGGCTCTCCCTGAGATAACACAGACGACAGGAACACGTCTACTATTTCCCTAATACTTTCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 99129 112 + 80904711 CAGCAAACTCAGGTAGTCAGCGCACCCGTCCTGCGTCTGCAGCGCAGCCGCTGGCTCTCCCTGAGGTAACACAGAGGACGGGAGCACGTCTCCTCTTTCCCTAATACTTTCA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 108095 112 + 74645514 cagcAAACTCAGGTAGTCAGCGCACCTGTCCTGCGTCTGCAGCGCAGTCGCTGGCTCTCCCTGAGGTAACACAGAGGGCGGGAACACGTCTCCTCTTTCCCTAACACTttca i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 913081 104 - 1291538 TAGCAACCTC-GGTGGCCAGAGCACCTGTCCTG-AGGTGCAGTGCAGTCACTGGCTGTCCTTTGGAGA------GAGGCATGGACATGGCTCGTCTCTCCCTGATACTGTCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75847596 92 + 122082543 GAGCAAGCTGAGGAGGTGAGCCTACCTGTCCCACA------------------GTTCTCGTTAGG--AACCCAGAGGGCAGGGCCACACCTCCTCCATCTTTAATATTTCCA i mm10.chr11 C 0 I 3595 s canFam3.chr9 15671804 112 - 61074082 TAGCAAACTCAGGTAGTCAGCCAGTCTGTCCCGCAGGTGCTAGAGTGTCACCAGCTCTCTTTGAGATAACACAGCAGAAAAAAATAGTTTGgatatttctctaatgcattct i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e ponAbe2.chr17 72652 49 + 73212453 I a score=84114.000000 s hg38.chr17_GL383563v3_alt 191112 67 + 375691 TTGTGTTATTTTTAACATTTCGATCTTACCTATCTGCAGTGTGTTTCTGGATACACCTAGAAGGAGA s panTro4.chr17 177433 67 + 82630442 TTGTGTTATTTTTAACATTTCGATCTTACCTATCTGCAGTGTGTTTCTGGATACACCTAGAAGGAGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 136918 67 - 81552678 TTGTGTTATTTTTAACGTTTCGATCTCATCTATCTGCAGTGTGTTTCTGGATACACCCAGAAGGAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 99241 67 + 80904711 CTGTGTTATTTTTAACATTTCGATCTTATCTATGTGTGATGTGTTTCTGGATACACCTAGAAGGAGA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 108207 67 + 74645514 ttgcattatttttaacatttcgaTCTTATCTATGTGTGATGTGTCTCTGGATACAcctagaaggaga i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 913185 67 - 1291538 TTGTGTTATTTTTAACATTTACATCTTGTCTCTCTGCAATGTGTTCCTGGATACACACAGAAGGAGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15671916 54 - 61074082 tttttttttttttaa-----agatattatttattta--------ttcatgagagacacagagggaga i canFam3.chr9 C 0 I 2369 e mm10.chr11 75847688 3595 + 122082543 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e ponAbe2.chr17 72652 49 + 73212453 I a score=254395.000000 s hg38.chr17_GL383563v3_alt 191179 238 + 375691 AAGAAATCTAATTGCACCAGCTCCAGTTATGAGATAGGTCTGTTAGCTTCTCATTAAGTTGAAAAGTGACTTATGGTTGGCGTCCATACATTCTCAGG-CTACCCTTTCTCTACTCTTGTCTATTCCACTCGTCTGTTTATTC---CTACAAATAAATATTCtgtttatcctgatgccaatactatatcgttcttactgatttcagtaactttatagt-aagctttaaaatttggCTGGATAG s panTro4.chr17 177500 238 + 82630442 AAGAAATCTAATTGCACCAGCTCCAGTTATGAAATAGGTCTGTTAGCTTCTCATTAAGTTGAAAAGTGACTTATGGTTGGCGTCCATACATTCTCAGG-CTACCCTTTCTCTATTCTTGTCTATTCCACTCGTCTGTTTATTC---CTACAAATAAATATTCtgtttatcctgatgccaatactatatcgttcttactgatttcagtaactttatagt-aagctttaaaatttggCTGGATAG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 136985 242 - 81552678 AAGAAATCTAACTGCACCAGCTCCAGTTATGAGATAGGTCTGTTAGCTTCTCATCGAGTTGAAAAGCGACTTACGGTTGGCGTCCGTACATTCTCAGG-CTACCCTTTCTTTATTATTGTCTATTCCACTTGTCTGTTGATTCATTCTACAAATAAATATTCTGTTTATCCTGACACCAATACTCTATTGTTCTTACTTATTTCAGTAACTTTATAGTCAAGCTTTAAAATTTGGCTGGACAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 99308 240 + 80904711 AAgaaatctcattgcgccagctccattt-taagacaggtctgttagcttctcactgagtcgaaaagcaacttatggctggcgtccatatattctcagg-ctaccgtttctctattcttgtctattccacttgtctattgattaattctgcaaataaatattctgtttgtcctgatgccaatactataccgttcttactgaatacagtaactttataga-aagctttacaatgtggccggacgg i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 108274 240 + 74645514 aagaaatctaATTGCACCAGCTCGATTT-TAAGACAGGTGTGTTAGCTTCTCACTGAGTTGAAAAGCAACTTACGGCTGGCGTCCATACATTCTCAGG-CTACCGCTTCTCTATTCTTGTCTATTTCACTTGTCTATTGATTAATTCTGCAAATAAATATTCTGTTTGTCCTGATGCCAATACTATACTGTTCTTACTGAATACAGTAACTTTATAGA-AAGCTTTACAATGTGGCTGGACAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 913252 237 - 1291538 AAgaaatctaattacaccagctccagttatgagatagatctgtta-tttctcactgagttgaaaagctacttacatttggcttccatacattcttaggtctgttctgtctctgttcctgtctattccacttgtctatttattcattct----ATAAATATTCTATTAATCCTGATGTCGATACTATATTGTTCTTATTGATTACAGTAACTTTATAGT-AGGGTTTAAAATTTGGTTGAATAG i calJac3.chrUn_GL286409 C 0 I 860 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e ponAbe2.chr17 72652 49 + 73212453 I a score=23086.000000 s hg38.chr17_GL383563v3_alt 191417 48 + 375691 TTCTTTCCACTACCCTCCCGAttctgttttgttttgttttgttttttt s panTro4.chr17 177738 43 + 82630442 TTCTTTCCACTACCCTCCCGAttc-----tgttttgttttgttttttt i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 137227 47 - 81552678 TTCTTTCCACTACCCTCCCGAttctgctttgtttt-ttttgttctttt i nomLeu3.chr19 C 0 M 62135 s rheMac3.chr16 99548 37 + 80904711 ttctttccactACTCCTGCGAttc----------tgttttgtttttt- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 108514 37 + 74645514 TTCTTTCCACTACTCCTGcgattc----------tgttttgtttttt- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e calJac3.chrUn_GL286409 913489 860 - 1291538 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e ponAbe2.chr17 72652 49 + 73212453 I a score=126946.000000 s hg38.chr17_GL383563v3_alt 191465 263 + 375691 gagagataggggtctcactctttcacccaggctggagtgcagtggtgcagtctcagcttactgccgcttcaagctcctgggctcaagtgatcctcccaccttagcctcctgagtagctgggactacagctatgtgccaccacacctggctaagtcttacaaatttatttgtagagacagtgtctcgttacgttgcccaggctagtcttgaactcttgactcaagcaatcctcctgacttggcctcccaaaatgctgggattac s panTro4.chr17 177781 263 + 82630442 gagagatatgggtctcactctttcacccaggctggagtgcagtggtgcagtctcaacttactgccgcttcaagctcctgggctcaagtgatcctcccaccttagcctcctgagtggctgggactacagctatgtgccgccacacccggctaagtcttagtaatttatttgtaaagacagtgtctcgttacggtgcccaagctagtattgaactcttgactcaagcgatcctcctgacttggcgctcccaaatgctgggattac i panTro4.chr17 C 0 M 1907 s rheMac3.chr16 99585 261 + 80904711 gcaagacacgggtctcactctttcacccaggctggagtgcagtggtgcggcctcggctcactgctgcttcaagctcctgggctcaagtgatcctcccaccttagcctcctgagtagctgggact--aggtatgtgccaccatacccagctaagttttaaaaatttgtctgtagaggcagtgtctctttatgttgcccaggctagtcttgaactcttgactcaagcaatcctcctaccttggcctcccaaagtgctgggattac i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 108551 261 + 74645514 gcgaGACacgggtctcactctatcacccaggctggagtgcagtggtgtggtctcagctcactgctgcttcaagctcctgggctcaagtgatcctcccaccttagcctcctgagtagctgggact--aggtatgtgccaccatacccagctaagttttaataATTTGTCTGTAGAGGCAgtgtctctttatgttgccccggctagtcttgaactcttgactcaagcaatcctcctgccttggcctcccaaagtgctgggattac i papAnu2.chr16 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e calJac3.chrUn_GL286409 913489 860 - 1291538 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I a score=14347.000000 s hg38.chr17_GL383563v3_alt 191728 55 + 375691 aggcatgagccagtgtacccagccTACCCTTGCTA---TTAGAAAGAGTTTTTTggcc s rheMac3.chr16 99846 58 + 80904711 aggcatgagccagtgtacccagccTACCCTTGCTATTCTTAAAAAGTGTTTTTTggcc i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 108812 58 + 74645514 aggcatgagccagtgtacCCAGCCTACCCTTGCTAttcttaaaaagtgttttttggCC i papAnu2.chr16 C 0 M 50 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e calJac3.chrUn_GL286409 913489 860 - 1291538 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I e panTro4.chr17 178044 1907 + 82630442 M a score=4946.000000 s hg38.chr17_GL383563v3_alt 191783 65 + 375691 aggtgcagtggctcacgcctctaatcctagcactttgggaggccaaggtggatggatcacctgat s rheMac3.chr16 99904 65 + 80904711 gggtgcgatggctcacgcctgtaatcccagcactttgggaggccaaggcgggcggatcacctgag i rheMac3.chr16 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e calJac3.chrUn_GL286409 913489 860 - 1291538 I e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 108870 50 + 74645514 M e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I e panTro4.chr17 178044 1907 + 82630442 M a score=52573.000000 s hg38.chr17_GL383563v3_alt 191848 222 + 375691 gtcaggagttcaagaccatcctgaccaacatggagaaaccccatctctactaaaaatacaaaattagcggggcgtggtggtgcaagcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacaagagtgaaactccgtctc-----aaaaaaaaa s rheMac3.chr16 99969 222 + 80904711 gtcaggagttcaagaccagcctggccaacatggagaaatcccgtctctactaaaaatacaaaatcagccaagcgtggtggcgggcacctgttatcccagctactcgggaggttgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatcacaccattgacctgcagcctgggtgacaagagcgaaactccatctc-----aaaaaaaaa i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 108920 227 + 74645514 gtcaggagttcaagaccagcctggccaacatggacaaaccccgtctctactaaaaatacaaaatcagccaagcgtggtggcgggcacctgtaaccccaactactcgggaagttgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagctgagatcgcaccattgccctccagcctgggtgacaagagagaaactccatctcaaaaaaaaaaaaaa i papAnu2.chr16 M 50 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e calJac3.chrUn_GL286409 913489 860 - 1291538 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I e panTro4.chr17 178044 1907 + 82630442 M a score=185286.000000 s hg38.chr17_GL383563v3_alt 192070 509 + 375691 aaaaGGTTTTTTTGTTG-------TAAGCTATTCTCCACCTTATGAATTTTAAAAactgaaatataatttatataccataaaaggtaccctcagaaagtatacaagtcagtggtttttagtatagccatacgtttacgtaaccaccacgatctagtttcagaccatttgcatcagctctgtgt---acccattagcagtcagtccccattcccct---ccccatcctccccaagccctggcaaccgcccatctactgtctgcctctgtgcactggcttgttcccacctgctcatat-----agatgagatcacacaacacgcggcctttcgtctccggcttcttccacttcgcatggtgttttcaaggctcatccaggctgcagcgtggatcagcactttcttcc----tacgactgaataacgttccactgtgtgattacacc--atattttatccattcatcagctgatggacgtacgagttgttgccactttttggttataatgcttctgtgaacaattgtgtccttatg s rheMac3.chr16 100191 514 + 80904711 aaaaaTGATTTTTTTTGT------TAAGCTATTCTCTACCTTACGAATTTTAAAAattgaaacataatttatatgccataaaatatacctctagaaagtacacaatccagtggtttttcgtgtagccacacatttgtgtaaccaccaacatctagtttcagagcatttccatcagctctgagggaaaccctgt--------gcccgcgttgccct---ccccgttctccccaagccttggccaccacccaccgaccttctgcctctgtgcattggcttgttcccgccagctcgtatacgcgagatcggatcacacaccacatggcgttttgtccccggcttcgctcactttgcatggtgttttcaaggttcatccaggctacagcgtggatcagcccttccctcctttttatgactgaataacgttccactgtgtgattacgcc--acattctgtccattcatcagttgatggacgtatgagttgttgccactctttggttataatgctcctgtgaacacttgtgtccttatg i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 109147 513 + 74645514 aaaaaagatttttgttgt------tAAGCTATTCTCTaccttacaaattttaaaaattgaaacataaTTTATATGCCATAAAATGTACCTTTAGAAAGTACACAATCCAGTGGTTTTTCGTGTAGCCACAcatttgtgtaaccaccaccatcTAG-TTCAGAGCATTTCCATCAGCTCTGAGGGAAACCCTGT--------GCCCGCGTTGCCCT---CTCCATTCTCCCCAAGCCCTGGCCACCACCCGTCGACCTTCTGCCTCTGTGCATTGGCTTGTTCCCGCCAGCTCGTATACGTGAGATCGGATCACACACCACGTGGCCTTTTGTCCCCGGCTTCGCTCACTTCACAtggtgttttcaaggttcatccagaTTACAGCGTGGATCAGCCCTTCcctcctttttatgactgaataacgTTCCACTGTGTGATTACGCC--ACATTCtgtccattcatcagttgacagACGTATGAGTTGTTGCCACTCTTTGGTTATAATGCTCCTGTGAACACTTGTGTccttatg i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 914349 501 - 1291538 AAAAGTGTTTGTTGTTGTTGTTACTAAGCTATTCTCTACCTTTGGAATTTTAAAAactgaaatataatttatacaccataaaatttacccttagaaagtacacaattcagtggtttctagtatagccataaatgtgtgcaaccaccacaatctgatttcagagcattttcatcagctctaggggaaatcctgtgcccatcagccatcagccccatatccttcaccctccccagtccctggcgaccaccaagctgctttctgccactgtg--------tgttctccccatctcatat-----gaatgagatcatgtggcatgtggccttt-gtctctggcttctttcacttggcatgatgtttccaaggctcatgtattc-----------tcagtacttcatcctttttcatggctgcataatgctccactgtgtgattatgccttattttttatccactcatca-------aatatatgagttgttgccactttttggctataatgctcctgtgaatgtttgtgtCCTTATG i calJac3.chrUn_GL286409 I 860 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I e panTro4.chr17 178044 1907 + 82630442 M a score=71232.000000 s hg38.chr17_GL383563v3_alt 192579 307 + 375691 aatatttAAAAATCATCTTCggccgggcacggtggctcatgcctgtaatcccagcaatttgggaggccaaggcgggaggatcacgaggtcaggagatcgagaccagcctggccaacacggtg-aaccctgtctctactaaacatacaaaaaatgagctcggcgt-gtagcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatttcttgaacccaggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctggc-gacagagtgagactccatctcaataataat s rheMac3.chr16 100705 310 + 80904711 aatatttaaaaatcatttTAggccgggcgcggtggctcacacctgtaatcccagcactttgggaggctgaggctggcagatcacaaggtcaggagattgagaccagcctggctaacatggtgaaaccccatctctactaaaattacaaaaaattagctgggcgtggtggaacgtgcctgtagtcccaactactcaggaggttgaggcaggagaattgtctgaacctgggaggcagaggttgcagtgagccgagattgcaccattgcactccagcctgggtgacagagcgagactccatctcaaaaaaaaa i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 109660 309 + 74645514 aatatttaaaaatcattttaggccgggcgcggtggctcacacctgtaatcccagcactttgagaggccgaggtgggcagatcacgaggtcaggggattgagaccagcctggctaacatggtgaaaccccgtctctactaaaattacaaaaaattagctgggtgtggtggaacatgcctgtagtcccagctactcaggaggctgaggcaggagaattgtctgaacccgggaggcagaggttgcagtgagccgagattgcaccactgcactccagcctggg-gacagagtgagactccacctcaaaaaaaaa i papAnu2.chr16 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e calJac3.chrUn_GL286409 914850 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I e panTro4.chr17 178044 1907 + 82630442 M a score=122558.000000 s hg38.chr17_GL383563v3_alt 192886 286 + 375691 a--ataataataataaTCTCGTTggccaaggatggtggctcatgcctgtaattccagcactttggaaggccaaggtgggtggacagcttgagctcaggactttgagaccagcctggacaacacagtgagactcccatctctac-aaaatatacgaatttaaaagtttggtaggtgcagtggtgtgcacctgtagtcccagctactggggaggctgaggtaggaggatcacgtgagcccaggaggtcaaggctgcagcgagccatgattgtgccacggcactccatcctg s rheMac3.chr16 101015 279 + 80904711 aagaaaaaaaaaaTCATTTTA--ggccgggcgcggtggctcaagcctgtaatcccagcactttgggaggccaaggtgggtgcacagcctgagctcaggatctcgagaccagcctggacaacatagtgagacgtccatctccacaaaaacatacaaatttaaaagtttgctgggtac--------gcacctgtagtcccagctaccgggggtgctgaggtaggaggatcacatgagcccaggaggtcaaggctgcagtgagccatgattgcgccacgacactccagcctg i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 109969 286 + 74645514 ---aaaaaaaaaatcatcttgttGGCCAAggatggtggctcgtgcctgtaattccagcacttcgggatgccaaggtgggtagacggcctgagctcaggatttcgagaccagcctggacaacatagtgagacgtccatctctacaaaaacatacgaATTTAAAAGTTTGCTGGGTACaacagtgtgcacctgtagtcccagctaccgggggtgctgaggtaggaggatcacatgagcccaggaggtcaaggctgcagtgagccatgattgcgccacgacactccagcctg i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 914850 285 - 1291538 --AATGGTAAAAATCATCTTGTTggccaaggatggtggctcatgcctataattcaagcacttttggaggacaaaatgggtggacagcttgagctcaggacttcgagatcagcctggacaacacagtgagac-cacatctctat-gaaaaatatgaatttaaaagtttgctgggtgcagaggtgtgcacctgtagtcccagctactgaggaggctgaggtaggaggatcacatgagcccagaaggtcaaggctgcagtgagccatgattgcgccactgcactccggtctg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I e panTro4.chr17 178044 1907 + 82630442 M a score=24739.000000 s hg38.chr17_GL383563v3_alt 193172 42 + 375691 ggtgacagagcaataccctgtctctaaaa-ttaaaaaa-----------gtaaa s panTro4.chr17 180016 44 + 82630442 GGTGACAGAGCAATACCCTGTCTCTAAAT-TAAAAAaaa---------agtaaa i panTro4.chr17 M 1907 C 0 s rheMac3.chr16 101294 54 + 80904711 ggtgacagggcaataccctgactctaaaatttaaaaaaaaaaaagtaaaaaaaa i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 110255 53 + 74645514 ggtgacaggacaataccctgactctaaaa-ttaaaaaaaaaaaaaagtaaaaaa i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 915135 46 - 1291538 ggcaacagagcaacaccttgtctctaaaa-ttaaaaaaaaa-------aaaaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15671970 2369 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I a score=276436.000000 s hg38.chr17_GL383563v3_alt 193214 390 + 375691 aaaaCctagaaattgatttgaatgtccatcgataggtgatta-----attataatacactatattgtgagattttactcagccatgaaaatgaataatgtaaaatctgtatccgttggcctggagggatgctcctgatactcttttaagtgaaaaaagcaccatgcagagtgttgggtaagagcctatttttattgctaaaacaaaagccaaaaaa---accccacccctttatcaagtatatgtttgtaggaacacagagaaagggtttggaGATGAGGGTAAGTAGAAGAGATGtttctttttctttttttttcttttttttttttttttGAGACGGAGTCTTGCTCTTTCTCTTTTTCACACACC-TTTGAA----TTAACTCGCTAAAATATATCTTGT s panTro4.chr17 180060 378 + 82630442 aaaaccttgaaattgattcgaatgtccattgataggtgatta-----attataatacactatattgtgagattttactcggccatgaaaatgaataatgtaaaatctgtatccgttggcctggagggatgctcatgatattcttttaagtgaaaaaagcaccatgcagagtgatgggtaagagcctatttttattgctaaaacaaaagccaaaaaa---aCCC-ACCCCTTTATCAAGTATATGTTTGTAAGAACACAGAGAAAGGGTTTGGAGATGAGGGGAAGTAGAAGAGATGtttctttttcttttttttt-----------ttttttGAGACGGAGTCTTGCTCTTTCTCTTTTTCACACACC-TTTGAA----TTAACTCGCTAAAATATATCTTGT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 101348 344 + 80904711 aaaaaCtagaaattgatctccatgtccatcaataggtgattaatcacattataatacactgtattgtgggattttactcagccatgaaaacgaacaatgtaaaatctgtatctgttggcctggagggatgctcctgatattcttttaagtgaagaaagcaccatgcagagggatgggtgagagcctatttttattgctaaaacaaaagccaaaaaaaaaACCCCACCCCTTTATCAAGTACAGGTTTGTAGGAACACAGAGAAAGGGTTTGGAGATGAGGGGAGGGAGAAGA-------------------------------------------------------CATTTTTCTTTTTCATACACCTTTTGAA----TTAACTTGCTAAAATATGTCATGT i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 110308 319 + 74645514 aaaaactagaaattgatCTCCATGTCCATCAATAGGTGATTAATCACATTATAATACACAATATTGTGGGATTttactcagccatgaaaatgaACAATGTAAAATCTGTATCTGTTGGCCTGGAGGGATGCTCATGCTATTCTTTTAAGTGAAGAA-------------------------AGCCTATTTTTATTGctaaaacaaagccaaaaaaaaacaCCCCACCCCTTTATCAAGTACAGGTTTGTAGGAACACAGAGAAAGGGTTTGGagatgaggggagggagaaga-------------------------------------------------------cttttttctttttcatacacCTTTTGAA----TTAACTTGCTAAAATATGTCATGT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 915181 327 - 1291538 aaaaaaCAgaaa-taatctgaatgtccatcaataagtgattaatgaaattataatgcactatattaggggattttactcagccatgagaat-aagaatgtaaaatctatacctgttggcctggagggaagctcatgattctcttctaagtgaaaaaagcagcatgcagagtgatggggaagagcctatttttgttgctaaaacaaaA------------GCCCCACCTGTTTATCAAGTGTATGTTTGCAGGGACACAGAGAAAGGG-CTAGAGATGAGGG-AAGTAGAAGA-------------------------------------------------------GGTTTTTCTTCTTCATACACC-TTTGAA----TTAACTTGCTAAAATAGATCATTA i calJac3.chrUn_GL286409 C 0 I 286 s canFam3.chr9 15674339 317 - 61074082 aaaagccagaaacaatttgaaatgtccatcaatagatgaataattaaatcataatacatggta------------------acatgaaaaagaataaagtaaaa----tatctattaatttggagggatgttcacgatgttcttttaagtgaaaaaagtaacatgcagagttataggtaagagcctatttttgttgttaaaagcaataaaacaaag---aaCC-AATCCTACATAAAGT----GTTTGTAGGAATAGGGACAAAGGGGTTGGGGATGACAGCAAGCAGAAGA-------------------------------------------------------GATTTTAAATTTTCATACATT-TTTGAATTGCTTAACTTGTTAAAATATATTATGT i canFam3.chr9 I 2369 C 0 e mm10.chr11 75847688 3595 + 122082543 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I a score=55098.000000 s hg38.chr17_GL383563v3_alt 193604 60 + 375691 ATTCTTATGTAATTAAAAATTAACAAAGAAAGGACTggcatggtggctcatgctggtaat s panTro4.chr17 180438 60 + 82630442 ATTCTTATGTAATTAAAAATTAATAAAGAAAGGACTggcatggtggctcacgctggtaat i panTro4.chr17 C 0 C 0 s rheMac3.chr16 101692 60 + 80904711 ATTCTTATGTAATTAAAAATAAACAAAGAAAGTcctggcacagtggctcacgctggcaat i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 110627 59 + 74645514 ATtcttatgtaattaaaaataaacaaagaaagtcctggcacagtggctcacgct-ccaat i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 915794 60 - 1291538 ATTCTTATGTAATTAAAAATTAACAAAGAAAGTccaggcatggtggctcacgctggtaat i calJac3.chrUn_GL286409 I 286 C 0 s canFam3.chr9 15674656 55 - 61074082 ATACTTATGTAATTAAAAATCAACATggagca-cctgg----gtggctcagtctgttaag i canFam3.chr9 C 0 I 161 e mm10.chr11 75847688 3595 + 122082543 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I a score=20323.000000 s hg38.chr17_GL383563v3_alt 193664 28 + 375691 ccccgcactttgggaggccgaggcaggt s panTro4.chr17 180498 28 + 82630442 cccagcactttgggaggccgaggcaggt i panTro4.chr17 C 0 C 0 s rheMac3.chr16 101752 27 + 80904711 cccagcactgtgggaggcc-aggctggt i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 110686 27 + 74645514 cccagcactgtgggaggcc-aggcTGGT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 915854 28 - 1291538 cccagcactttgggaggccaaggcaggt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674711 161 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 72652 49 + 73212453 I a score=284652.000000 s hg38.chr17_GL383563v3_alt 193692 237 + 375691 gaattgtttgaggccaaggggtttgagaccagcctggccaatatggcgaaaccccgtctctactaaaaatacaaaaattagccaggtttggtggtatatgcctgtaatcccagctattcaggaggctaagacttgagaattgcttgaatccaaaaggcagaggttgtagtgagcagagatcacaccaccacactccagcctgggtggcagagcaagactgtctcaataaaaaaaaga s panTro4.chr17 180526 237 + 82630442 gaattgtttgaggccaaggggtttgaggctagcctggccaatatggtgaaaccccatctctactaaaaatacaaaaattagccaggtttggtggtatatgcctgtaatcccagctattcaggaggctaagacttgacaattgcttgaatccaaaaggcggaggttgcagtgagcagagatcacgccaccacactccagcctgggtggcagagcaagactgtctcaataaaaaaaaga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72701 237 + 73212453 GAATTGTTtgaggccaaggggtttcagactagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtttggtggtgtatgcctgtaatcccagctattcaggagggtaagacttgagaattgcttgaatccaaaaggcggaggttgcagtgagccgagatcgcaccaccacactccaacctgggtggcagagcaagactgtctcaataaaaaaaaga i ponAbe2.chr17 I 49 C 0 s rheMac3.chr16 101779 237 + 80904711 gaattgtttaaggccaaggggtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaattacaaatattagccgggtttggtggtgcacgcctgtaatctcagctactcaggaggctaagacatgagaattgcttgaacccgagaggtggaggttgcagtgagccaagatgacaccactgccctccagcctgggtggcagagcaagactgtctcaaaaagaaaaaga i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 110713 237 + 74645514 GAATTGTTTAAGGCcaaggggtttgagaccagcctggccaacatggtgaaacctcgtctctactaaaattacaaatattagccgggtttggtggtgcacgcctgtaacctcagctactcaggaggctaagacatgagaattgcttgaacccgagaggtggaggttgcagtgaggcaagatgacaccgctgcactccagcctgggtggcagagcaagactgtctcaaaaagaaaaaga i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 915882 237 - 1291538 gaattgtttgaggctaaggagtttgagaccagcctggccaacatggtgaatccccatctctactaaaattacaaaacttagccaggcatgatggtgcacctctgtaatcccagctactcaggaggctaagacacaagaattgcttgaacccaataggtggaggttgcagtgagccaagatcacaccaccatacttcagcctgggtggcagagcaagactgtcttaaaaaaaaaaaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674711 161 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=150535.000000 s hg38.chr17_GL383563v3_alt 193929 107 + 375691 a-----aaaa-attaacaaaaaaaCTTTAAAGGAGGAAGAAAAAGGAACCCACCTCAGAAACATCAAC-CCTTTCACCTGATTGCTCTGTGGGTTGAAAAGTTCATGACTTGTA s panTro4.chr17 180763 107 + 82630442 a-----aaaa-attaacaaaaaaaCTTTAAAGGAGGAAGAAAAAGGAACCCACCTCAGAAACATCAAC-CCTTTCACCTGATTGCTCTGTGGGTTGAAAAGTTCATGACTTGTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 72938 107 + 73212453 a-----aaaa-attaacaaaaaaaCTTTAAAGGAGGAAGAAAAAGGAACCTACCTCAGAAACATCAAC-CCTTTCACCTGATTGCTCTGTGGGTTGAAAAGTTCATGACTTGTA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 102016 109 + 80904711 a-----aaaacattaacaaaaaaTACTTAAAGGAGTAAGAAAAAGGAACCCACCTCAGCAACATCAATGCTTTTCACCTGATTGCTCTGTGGGTTGAAAAGTTCACGACTTGTA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 110950 109 + 74645514 a-----aaaccattaacAAAAATTACTTAAAGGAGTAAGACAAAGGAACCCACCTCAGCAACGTCAATGCTTTTCACCCGATTGCTCTGTGGGTTGAAAAGTTCACGACTTGTA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 916119 113 - 1291538 agatagaaaaTATTAACAAAAACAAATTAAAGGAGGAAGAAAAAAGAACCTA-CTCAGAAACATCAACCCCTTTCACTTGATTGTTCTGTGGATTGAAAAGTTCATGACTTGTA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15674872 107 - 61074082 a-----aaaa-aTTAGTACAAAAAATTTAAAGGAG-AAAAAAAAGGAACCTGCCTCAAAAACATCAATATATATTACCTGATTGACCTATGGCCTGAAAAGTTCATGGCTTATA i canFam3.chr9 I 161 I 2 e mm10.chr11 75847688 3595 + 122082543 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=4230.000000 s hg38.chr17_GL383563v3_alt 194036 3 + 375691 GTA s panTro4.chr17 180870 3 + 82630442 GTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73045 3 + 73212453 GTA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 102125 3 + 80904711 GTA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 111059 3 + 74645514 GTA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 916232 3 - 1291538 GTA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=422.000000 s hg38.chr17_GL383563v3_alt 194039 1 + 375691 T s panTro4.chr17 180873 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73048 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 102128 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s calJac3.chrUn_GL286409 916235 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=780.000000 s hg38.chr17_GL383563v3_alt 194040 2 + 375691 CT s panTro4.chr17 180874 2 + 82630442 CT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73049 2 + 73212453 CT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 102129 2 + 80904711 CC i rheMac3.chr16 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=942.000000 s hg38.chr17_GL383563v3_alt 194042 5 + 375691 ATTCA s panTro4.chr17 180876 5 + 82630442 ATTCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73051 5 + 73212453 ATTGA i ponAbe2.chr17 C 0 I 7 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=555.000000 s hg38.chr17_GL383563v3_alt 194047 6 + 375691 TGATTA s panTro4.chr17 180881 6 + 82630442 TGATTA i panTro4.chr17 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73056 7 + 73212453 I a score=300.000000 s hg38.chr17_GL383563v3_alt 194053 1 + 375691 C s panTro4.chr17 180887 1 + 82630442 C i panTro4.chr17 C 0 I 19 s ponAbe2.chr17 73063 1 + 73212453 C i ponAbe2.chr17 I 7 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=100.000000 s hg38.chr17_GL383563v3_alt 194054 1 + 375691 C s ponAbe2.chr17 73064 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 180888 19 + 82630442 I a score=8265.000000 s hg38.chr17_GL383563v3_alt 194055 32 + 375691 TTCCTCTATTGATTACCTTCCTCTATTGACTA s panTro4.chr17 180907 32 + 82630442 TTCCTCTATTGATTACCTTCCTCTATTGACTA i panTro4.chr17 I 19 T 51 s ponAbe2.chr17 73065 32 + 73212453 TTCCTTTATTGATTACCCTCCTCTATTGATTA i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=7218.000000 s hg38.chr17_GL383563v3_alt 194087 28 + 375691 CCTTCCTCTATTGACTACCTTCCTCTAT s panTro4.chr17 180888 28 + 82630442 CCTTCCTCTATTGACTACCTTCCTCTAT i panTro4.chr17 T 51 C 0 s ponAbe2.chr17 73097 28 + 73212453 CCCTCCTCTATTGATTACCCTCCTCTAT i ponAbe2.chr17 C 0 T 69 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=10661.000000 s hg38.chr17_GL383563v3_alt 194115 44 + 375691 TGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTACCC s panTro4.chr17 180916 43 + 82630442 TGATTACC-TTCCTCTATTGACTACCTTCCTCTATTGATTACCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73056 44 + 73212453 TGATTACCCTTCCTTTATTGATTACCCTCCTCTATTGATTACCC i ponAbe2.chr17 T 69 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=1601.000000 s hg38.chr17_GL383563v3_alt 194159 17 + 375691 TTCCTCTATTGATTACC s panTro4.chr17 180959 17 + 82630442 TTCCTCTATTGATTACC i panTro4.chr17 C 0 I 53 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73100 0 + 73212453 C a score=8132.000000 s hg38.chr17_GL383563v3_alt 194176 86 + 375691 TTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGACTAC s panTro4.chr17 181029 86 + 82630442 TTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGACTAC i panTro4.chr17 I 53 T 139 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73100 0 + 73212453 C a score=23587.000000 s hg38.chr17_GL383563v3_alt 194262 287 + 375691 CTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTAT s panTro4.chr17 180976 269 + 82630442 CTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGAC-----------------TACCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGACTACC-TTCCTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGATTACCTTCCTCTATTGACCACCTTCCTCTAT i panTro4.chr17 T 139 I 2820 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73100 0 + 73212453 C a score=3376.000000 s hg38.chr17_GL383563v3_alt 194549 43 + 375691 TGAATACCTTCCTCTATTGAATACCTTCCTCTATTGACTACCT s panTro4.chr17 184065 43 + 82630442 TGACTACCTTCCTCTATTGATTACCTTCTTCTATTGATTACCT i panTro4.chr17 I 2820 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73100 0 + 73212453 C a score=29253.000000 s hg38.chr17_GL383563v3_alt 194592 162 + 375691 TCCTCTATTGATTAC-CTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTACCTTTCCTCTACTGATTACCTTCCTCTACTGATTGCCCCTCCTCTACTGATTGCCCCTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCT s panTro4.chr17 184108 159 + 82630442 TCCTCTACTGATTACACTTCCTCTANTGATTACACTTCCTCTATT----ACCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTACTGATTACCCTTCCTCTACTGATTACCCTTCCTCTACTGATTACCTTCCTCTATTGATTACCCTTCCT i panTro4.chr17 C 0 T 240 s ponAbe2.chr17 73100 125 + 73212453 TCCTCTATTGATTAC-CCTCCTCTATTGATTACCCTTCCTCTACT-----------------GATTACC-TTCCTCTACTGATTACCTTCCTCTACTGATTA-------------------CCTTCCTCTACTGATTACCTTCCTTTATTGATTACCTTTCCT i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=1994.000000 s hg38.chr17_GL383563v3_alt 194754 8 + 375691 CTATTGAT s panTro4.chr17 184027 8 + 82630442 CTATTGAC i panTro4.chr17 T 240 C 0 s ponAbe2.chr17 73225 8 + 73212453 CTATTGAT i ponAbe2.chr17 C 0 T 170 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=182.000000 s hg38.chr17_GL383563v3_alt 194762 2 + 375691 TA s panTro4.chr17 184035 2 + 82630442 TA i panTro4.chr17 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73233 170 + 73212453 T a score=24399.000000 s hg38.chr17_GL383563v3_alt 194764 105 + 375691 CCTTCCTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTAC-CTTCCTCTATTGATTACC s panTro4.chr17 184037 105 + 82630442 CCTCCTTCTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGATTACCTTCTTCTATTGATTA-CCTTCCTCTACTGATTACACTTCCTCTANTGATTACA i panTro4.chr17 C 0 I 306 s ponAbe2.chr17 73063 105 + 73212453 CCTTCCTTTATTGATTACCCTCCTCTATTGATTACCCTCCTCTATTGATTACCCTCCTCTATTGATTACCCTTCCTCTACTGATTAC-CTTCCTCTACTGATTACC i ponAbe2.chr17 T 170 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=2435.000000 s hg38.chr17_GL383563v3_alt 194869 27 + 375691 TTTCCTCTACTGATTACCTTCCTCTAC s ponAbe2.chr17 73168 26 + 73212453 -TTCCTCTACTGATTACCTTCCTCTAC i ponAbe2.chr17 C 0 I 39 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 184142 306 + 82630442 I a score=2078.000000 s hg38.chr17_GL383563v3_alt 194896 36 + 375691 TGATTGCCCCTCCTCTACTGATTACCCTTCCTATAA s panTro4.chr17 184448 35 + 82630442 TGATTACCCTTCCTCTATTGATTA-CCTTCCTCTAT i panTro4.chr17 I 306 T 212 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73194 39 + 73212453 I a score=15728.000000 s hg38.chr17_GL383563v3_alt 194932 92 + 375691 TGATTACCCTTCCTCT----ATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGACTACCTTCCTCTATTGATTACCCTTCCTCTATTGAT s panTro4.chr17 184271 92 + 82630442 TGATTACCCTTCCTCT----ATTGATTACCCTTCCACTATTGATCACCTTCCACTATTGATCACCTTCCTCTATTGATTACCCTTCCTCTATTGAT i panTro4.chr17 T 212 C 0 s ponAbe2.chr17 73233 66 + 73212453 TGATTACCCTTCCTCTATTGATTGATTACCCTTCCTCTATTG------------------------------ATTGATTACCCTTCCTCTATTGAT i ponAbe2.chr17 I 39 T 131 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=1132.000000 s hg38.chr17_GL383563v3_alt 195024 21 + 375691 T-CCCTTCCTCTATTGATTA-CC s panTro4.chr17 184363 23 + 82630442 TACCCTTCCTCTATTGATTACCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73299 131 + 73212453 T a score=7470.000000 s hg38.chr17_GL383563v3_alt 195045 33 + 375691 TTCCTCTATTGACTA-CCTTCCTCTATTGACTAC s panTro4.chr17 184386 34 + 82630442 TTCCTCTATTGATTACCCTTCCTCTATTGATTAC i panTro4.chr17 C 0 T 278 s ponAbe2.chr17 73168 33 + 73212453 TTCCTCTACTGATTA-CCTTCCTCTACTGATTAC i ponAbe2.chr17 T 131 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=3055.000000 s hg38.chr17_GL383563v3_alt 195078 18 + 375691 CTTCCTCTATTGATTACC s panTro4.chr17 184142 14 + 82630442 CTTCCTCTATT----ACC i panTro4.chr17 T 278 C 0 s ponAbe2.chr17 73201 18 + 73212453 CTTCCTTTATTGATTACC i ponAbe2.chr17 C 0 T 19 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=5492.000000 s hg38.chr17_GL383563v3_alt 195096 62 + 375691 TTCCTCTATTGATTACCTTTCCTCTATTGATTACCTTCCTCTACTGATTGCCCCTCCTCTAC s panTro4.chr17 184156 62 + 82630442 TTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTACTGATTACCCTTCCTCTAC i panTro4.chr17 C 0 T 2973 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T a score=10027.000000 s hg38.chr17_GL383563v3_alt 195158 113 + 375691 TGATTACCCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCCTTCCTCTATTGACTACCTTCCTCTATTGACTAC s panTro4.chr17 181245 112 + 82630442 TGATTACCCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGACTA-CCTTCCTCTATTGACTACCTTCCTCTATTGACTAC i panTro4.chr17 T 2973 I 2670 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T a score=0.000000 s hg38.chr17_GL383563v3_alt 195271 6 + 375691 CTTCCT e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T e panTro4.chr17 181357 2670 + 82630442 I a score=5950.000000 s hg38.chr17_GL383563v3_alt 195277 74 + 375691 CTATTGACTACCTTCCTCTATTGACTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATT s panTro4.chr17 184027 73 + 82630442 CTATTGACTACCTCCTTCTATTGACTACCTTCCTCTATTGACTACC-TTCCTCTATTGATTACCTTCTTCTATT i panTro4.chr17 I 2670 I 400 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T a score=0.000000 s hg38.chr17_GL383563v3_alt 195351 17 + 375691 GATTACCCTTCCTCTAT e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T e panTro4.chr17 184100 400 + 82630442 I a score=2437.000000 s hg38.chr17_GL383563v3_alt 195368 33 + 375691 TGACTA-CCTTCCTCTATTGATTACCCTTCCTCT s panTro4.chr17 184500 34 + 82630442 TGATTACCCTTCTTCTATTGATTACCCTTCCTCT i panTro4.chr17 I 400 T 434 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T a score=0.000000 s hg38.chr17_GL383563v3_alt 195401 50 + 375691 ACTGATTGCCCCTCTACTGATTACCCTTCCTCTATTGATTACCTTCCTCT e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T e panTro4.chr17 184534 434 + 82630442 T a score=13887.000000 s hg38.chr17_GL383563v3_alt 195451 159 + 375691 GATTACCTTCCTCTACTGATTACACTTCCTCTACTGATTACACTTCCTCTATTA------------------CCTTCCTCTATTGATTACCTTCCTCTACTGATTACCCTTCCTCTACTGATTACCCTTCCTCTACTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTA s panTro4.chr17 184100 177 + 82630442 GATTACCTTCCTCTACTGATTACACTTCCTCTANTGATTACACTTCCTCTATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTACTGATTACCCTTCCTCTACTGATTACCCTTCCTCTACTGATTACCTTCCTCTATTGATTACCCTTCCTCTATTGATTA i panTro4.chr17 T 434 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73219 19 + 73212453 T a score=6493.000000 s hg38.chr17_GL383563v3_alt 195610 64 + 375691 CCCTTCCTCTATTGATTACCTTCCTCTATTACTTTCCTCT----ATTGATTACCCTTCCTCTATTGAT s panTro4.chr17 184277 34 + 82630442 CCCT------------------------------TCCTCT----ATTGATTACCCTTCCACTATTGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73200 55 + 73212453 -CCTTCCTTTATTGATTACCTT------------TCCTCTATTGATTGATTACCCTTCCTCTATTGAT i ponAbe2.chr17 T 19 I 44 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=8679.000000 s hg38.chr17_GL383563v3_alt 195674 150 + 375691 CACCTTCCTCTATTGATCACCTTTCTCTATTGATTACCCCTCTATTGATTACCCTTCCTCTATTGATTATCTTCCTCTATTGATTACCCTTCCTCTATTGATT-CCCTTCCTCTATTGATTACCCTTCCTCTATTGATCACCTTCCTCTAT s panTro4.chr17 184311 119 + 82630442 CACCTTCCACTATTGATCACCTTCCTCTATTGATTACCC--------------------------------TTCCTCTATTGATTACCCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTGTAT i panTro4.chr17 C 0 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 73255 44 + 73212453 I a score=20853.000000 s hg38.chr17_GL383563v3_alt 195824 83 + 375691 TGATTACCCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTA-CCTTCCTCTATTGATTACCCTTCC s panTro4.chr17 184430 83 + 82630442 TGATTACCCTTCCTCTATTGATTACCCTTCCTCTATTGATTACCTTCCTCTATTGATTA-CCTTCCTCTATTGATTACCCTTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73299 83 + 73212453 TGATTACCCTTCCTCTACTGATTACCCTTCCTCTATTGATTACCTTCCTCTACTGATTACCCTTCCTCTATTGATTA-CCTTCC i ponAbe2.chr17 I 44 C 0 e mm10.chr11 75847688 3595 + 122082543 I e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111062 0 + 74645514 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=910.000000 s hg38.chr17_GL383563v3_alt 195907 1 + 375691 T s panTro4.chr17 184513 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73382 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 111062 1 + 74645514 T i papAnu2.chr16 C 0 C 0 s mm10.chr11 75851283 1 + 122082543 T i mm10.chr11 I 3595 C 0 e canFam3.chr9 15674979 2 - 61074082 I e calJac3.chrUn_GL286409 916236 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=1500.000000 s hg38.chr17_GL383563v3_alt 195908 1 + 375691 C s panTro4.chr17 184514 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73383 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 111063 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 916236 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75851284 1 + 122082543 C i mm10.chr11 C 0 C 0 e canFam3.chr9 15674979 2 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=1179.000000 s hg38.chr17_GL383563v3_alt 195909 1 + 375691 T s panTro4.chr17 184515 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73384 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 111064 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 916237 1 - 1291538 T i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75851285 1 + 122082543 T i mm10.chr11 C 0 C 0 s canFam3.chr9 15674981 1 - 61074082 T i canFam3.chr9 I 2 C 0 e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 102131 0 + 80904711 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=115790.000000 s hg38.chr17_GL383563v3_alt 195910 72 + 375691 ATTGATTACCCTTCCTCTTCCAACAGGGCATGAGAAAGAAAATAGGGTGGCCTGGGATGCAGGGAGAAGAAG s panTro4.chr17 184516 71 + 82630442 ATTGATTACCCTTCCTCTTCCAACAGGGCATGAGAAAGAAA-TAGGGTGGCCTGGGATGCAGGGAGAAGAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73385 72 + 73212453 ATTGATTACCCTTCCTCTTCCAACAGGGCATGGGAAAGAAAATGGGGTGGGCTGGGATGCAGGGAGAAGAAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 102131 72 + 80904711 ATTGGTTACCCTTCCTCTTCCAACAGCGCATGAGAAAGCAAATGGGGTGGGCTGGGATGCAGGGAGAAGAAG i rheMac3.chr16 C 0 I 828 s papAnu2.chr16 111065 72 + 74645514 ATTGGTTACCCTTCCTCTTCCAACAGCgcatgagaaagaaaatggggtgggctgggatgcagggagaaGAAG i papAnu2.chr16 C 0 I 9 s calJac3.chrUn_GL286409 916238 71 - 1291538 ATTGATTACCCTTCCTCTTCCAATGGGGCATGAGAAAGAAAATGGGGTGGGCTGGGACA-GGGGAGAAGAAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75851286 45 + 122082543 ATTGCTTAGCCCTACATTTCCAACAGGCCACAAGAAAGGAAATGA--------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15674982 68 - 61074082 GTTGATTATTCTTCCTCTTGTAACAGGGCACGAGAAAGAAAGTAGGGTGGGGTGGACTG----GGGAAGAAG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=52509.000000 s hg38.chr17_GL383563v3_alt 195982 109 + 375691 TTGGGAGCTACAGGTGCATGAGCCTAAGAGATGTGGGATGTAGG-----GAGAGGGAGAGAGGGAGAGAAGGGAAGAGAA--------------------TGGGGGGGGAGAGG--------------------------------GGGAGAAAGA-------------------ACTGGAGGTG s panTro4.chr17 184587 108 + 82630442 TTGGGAGCTACAGGTGCATGAGCCTAAGAGATGTGGGATGTagg-----gagagggagagagggagagaagggaagagaa---------------------gggcggggagaga--------------------------------gagagaaaga-------------------ACTGGAGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73457 113 + 73212453 TTGGGAGCTACAGGTGCATGAGCCTAAGGGATGTgggatgtagg---gagagagggagcgagggagagaagggaagagaagg------------------cggtggggtggaga--------------------------------gagagagaga-------------------aatggaggtg i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 111146 124 + 74645514 TTGGGAGCTGCAGGTGTACAAGCCTAagggatgtggggggtgg------gagggagagggagggggagacggagggagtg--------------------gggggggggagaga--------------------------------gagagagagagagagagagagag---atggatggaggtg i papAnu2.chr16 I 9 C 0 s calJac3.chrUn_GL286409 916309 144 - 1291538 TTGGGAGCTGCAGGTACATGAGCCTAAGGGATGTGGGGTGCAGgagggagggagggagggggagagagaaagcaagagggggagagaga-----gagagacagagagagagaga--------------------------------gagagagagagagagagagagaa---agGAATGGAGGT- i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75851331 70 + 122082543 --GGGAGGTCTAAGTGCTAGAGCCCAAGT--CTTGGGGTGTGGG---GATGGAATAAGGGTGGGGAAGAGGGTCACA------------------------------------------------------------------------------------------------------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15675050 182 - 61074082 CTGGAAGTCACAGGTGTACGAGTGCAAGGGCagagagagagaga---gagagagggagagggagaatgaaagagtgagagagGAAGGGAAGAACAGGGGCAGGGGAAGAAGAGAGCAGCTTTtttttttttttttttaatttatttgagagaggaagaaagagagagaacacacaagcaagggtg i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 102203 828 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=202158.000000 s hg38.chr17_GL383563v3_alt 196091 215 + 375691 GGCAAAGAGGCTTAGAGAGAGGCTGAGA-------------GAGCGAGCAAGCTGGTGCTGTGATCAGCTCCAAGCCAGTGAA--------------------------------------------------------------------------AGGGACTGTGGGGCAGGAAGAAG--ATGCTGGCCCCGGGGCCCTCGGAGGCAGGGTCCCAGGAGGAGCAGCGTCTGGTGAGAGC--AGGGTGGTTTTCACAGCCTCCGAGTATCTCCTGGGACTTTCCAG--CAGA-CCCCAATCCAGAGGA s panTro4.chr17 184695 214 + 82630442 G-CAAAGAGACTTAGAGAGAGGCTGAGA-------------GAGCGAGCAAGCTGGTGCTGTGATCAGCTCCAGGCCAGTGAG--------------------------------------------------------------------------AGGGACTGTGGGGCAGGAAGAAG--ATGCTGGCCCCGGGGCCCTCGGAGGCAGGGTCCCAGGAGGAGCAGCGTCTGGTGAGAGC--AGGGTGGTTTTCACAGCCTCCGAGTATCTCCTGGGACTTTCCAG--CAGA-CCCCAATCCAGAGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73570 222 + 73212453 g-caaagaagcttagagggaggctgagagag-----cgagcgagcgagCAAGCTGGTGCTGTGATCGGCTCCAAGCCAGTGAG--------------------------------------------------------------------------AGGGACTGTGGGGCGGGAGAAGG--ATGCTGGCCCCAGGGCCCTCAGAGGCAGGGTCGCAGGAGGAGCAGCGTCTGGTGAGAGC--AGGGTGTTTTTCACAGCCTCCGAGTATCTCCTGGGACTTTCCAG--CAGA-CCCCAATCCAGAGGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 103031 196 + 80904711 G-CAAAGAGGCTTAGAGAGAGGCTGAGA-------------GAGCGAGCCAGCTGGCGCTGTGACGGGCTCCAGGCCAGTGAC--------------------------------------------------------------------------AGGGGCTCTGGGGCAGGAGGAGGCCATGCT----------------------GTGTCCCGGGAGGAGCAGCGTCTGGTGAGAGCAGAGGGAGGTTTTCACAGCCTCTGAGTATCTCCTGGGACTTCCCAG--CAGA-CCCCGACCCGGAGGA i rheMac3.chr16 I 828 I 1352 s papAnu2.chr16 111270 196 + 74645514 g-caaagaggcttagagagaggctgaga-------------gcgcgagcgagctggcgCTGTGATCGGCTCCAGGCCAGTGAC--------------------------------------------------------------------------AGGGGctctggggcaggaggaggccATGCT----------------------GTGTCCCGGGAGGAACAGCGTCTGGTGAGAGCAGAGGGAGGTTTTCACAGCCTCTGAGTATCTCCTGGGACTTTCCAG--CAGA-CCCCGACCCGGAGAA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 916454 170 - 1291538 G-CAAAGAGGCTTAGAGAGAGGCTGAGG-------------GAACGAGTGAGCTTGTGCTGTGTTTGGCTCCAAGCC---------------------------------------------------------------------------------------------------------ATATC---------------GGAGGCAGGGGCCCAGGAGGAAGAGCATCTGGTGAGAGC---AGGTGGCTTTCACAGCCTCTGAGTATCTCCTGGGGCTGTCCAG--CAGACCCCCAGTCCAGAGGA i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75851401 176 + 122082543 --------------------------------------------TGGGTGACATGGTGCTAGCCTCAGCTCTATGCCTGTGGG--------------------------------------------------------------------------AAGAGCTGT-GGGCAGGAGGGGACAGTGAC----CTGGAGCTCCTCAAGCCCCGGGGCCAGGAAGAGAGCTTCCTTGTGAG-----GGGTTGGTTTTACCAGCCACCCAACATCTCTTGGGTCCATCTAG--CATC-TCATGGACCAGAG-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15675232 284 - 61074082 --gggaggggcagagggagagggagaaacaggctctccactgagcagggaacctgatgtcgggctagatcccaggaccctgagatcatgacctgagcagatgctaaatccactgagccactcaggcacccGCAGGAGCAGCTTTCTCCCTGGGAAGCAGGGACTGTGGGGCAGGAGAGGG--ATGATGACCCTAGGGTTCCCAGAGGCAGAGCC--------------------TGGGAGT-GGGGGTGGTTTGAATAGTCTTCAAGGGTCTCTTGGGGCTGCCCAGAACAGAACTCTGATCCAGGGGA i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=2547.000000 s hg38.chr17_GL383563v3_alt 196306 3 + 375691 TCC s panTro4.chr17 184909 3 + 82630442 TCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73792 3 + 73212453 TCC i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 111466 3 + 74645514 GCC i papAnu2.chr16 C 0 I 1164 s calJac3.chrUn_GL286409 916624 3 - 1291538 GCC i calJac3.chrUn_GL286409 C 0 I 1571 s canFam3.chr9 15675516 3 - 61074082 GCC i canFam3.chr9 C 0 I 1619 e mm10.chr11 75851577 0 + 122082543 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 103227 1352 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=702.000000 s hg38.chr17_GL383563v3_alt 196309 4 + 375691 ACAC s panTro4.chr17 184912 4 + 82630442 ACAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73795 3 + 73212453 ACA- i ponAbe2.chr17 C 0 C 0 s mm10.chr11 75851577 4 + 122082543 ACAC i mm10.chr11 C 0 C 0 e canFam3.chr9 15675519 1619 - 61074082 I e calJac3.chrUn_GL286409 916627 1571 - 1291538 I e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 111469 1164 + 74645514 I e rheMac3.chr16 103227 1352 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=2794.000000 s hg38.chr17_GL383563v3_alt 196313 4 + 375691 TCTA s panTro4.chr17 184916 4 + 82630442 TCTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73798 3 + 73212453 -CTA i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 112633 4 + 74645514 TCTG i papAnu2.chr16 I 1164 C 0 s calJac3.chrUn_GL286409 918198 4 - 1291538 TCTG i calJac3.chrUn_GL286409 I 1571 C 0 s mm10.chr11 75851581 4 + 122082543 TGTG i mm10.chr11 C 0 C 0 e canFam3.chr9 15675519 1619 - 61074082 I e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 103227 1352 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=23343.000000 s hg38.chr17_GL383563v3_alt 196317 30 + 375691 CTGCAAGAGCATGGGGCCACTGCCCTCCTC s panTro4.chr17 184920 23 + 82630442 CTGCAACAGCATGGGG-------CCTCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73801 30 + 73212453 TTGCAAGAGCGTGGGGCCACTGCCCTCCTC i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 112637 29 + 74645514 TTGCAAGAGTG-GGGGCCCCTGCCCTCCTC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918202 30 - 1291538 CTGCAAGAGTGTGGGGCCGCTGCCCTCCTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75851585 30 + 122082543 ATGTGATGACCCCAAGCTCCTGCTAGCCTC i mm10.chr11 C 0 I 1150 s canFam3.chr9 15677138 29 - 61074082 CTGCAAGCATGT-GGGCCGCTGGCCTCCTC i canFam3.chr9 I 1619 C 0 e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 103227 1352 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=34583.000000 s hg38.chr17_GL383563v3_alt 196347 69 + 375691 GCCCATGAAATTAAAAGGCCATCTTTTAATTAATTAAAAGGCCAAGTCTGCGTGCCTGAGGAAGTGAGG s panTro4.chr17 184943 65 + 82630442 GCCCATGAAATTAAAAGGCCATCTT----TTAATTAAAAGGCCAAGTCTGGGTGCCTGAGGAAGTGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73831 69 + 73212453 ACCCATGAAATTAAAAGGCCATCTTTTAATTAATTAAAAGGCCAAGTCTGCATGGCTGAGTAGGTGAGG i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 112666 41 + 74645514 GCCCACGGAATTAAAAGG------------------------CAAATCTGCGTGGCTGAGGG---GAG- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918232 69 - 1291538 GCCCGGGTAATTAAAAGGCCATCTTTTAAGTAATTAAACGGTCAAGTCTGCATGGCTAAAGAGGTGACG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15677167 47 - 61074082 GCTCGCATTATTAAAAGGCCATCTGT-------------------GCCTGCGTGATCGAGGAGATG--- i canFam3.chr9 C 0 C 0 e mm10.chr11 75851615 1150 + 122082543 I e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 103227 1352 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=32281.000000 s hg38.chr17_GL383563v3_alt 196416 20 + 375691 GGGGCTCTGCTCCTCCCCAG s panTro4.chr17 185008 20 + 82630442 GGGGCTCTGCTCCTCCCCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73900 20 + 73212453 GGGGCTCTGTTCCTCCCCAC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 104579 20 + 80904711 GGGGCTCTGCTCCTCCCCAG i rheMac3.chr16 I 1352 C 0 s papAnu2.chr16 112707 20 + 74645514 GGGGCTCTGCTCCTCCCCAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918301 20 - 1291538 GCAGCTCCGCTCCTCCCCAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15677214 19 - 61074082 GAGGCTCTGC-CCTCCCCAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75851615 1150 + 122082543 I e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=29293.000000 s hg38.chr17_GL383563v3_alt 196436 30 + 375691 GGTGTGCGCATGTGCATGGGAGTATGTGTG s panTro4.chr17 185028 28 + 82630442 Ggtgtgcgcatgtgcatgggagta--tgtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73920 26 + 73212453 Ggtgtgcacatgtgaatgggag----tgtg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 104599 30 + 80904711 GGCGTGCTCATGTGCATGGGAGTGTGTGTG i rheMac3.chr16 C 0 I 3872 s papAnu2.chr16 112727 30 + 74645514 GGCGTGCTCATGTGCATAGGAgtgtgtgtg i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918321 30 - 1291538 Ggcgtgtgcatgtacatgggagtgtgtgtg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e chlSab2.chr16 102364 0 + 75148670 C e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=60605.000000 s hg38.chr17_GL383563v3_alt 196466 148 + 375691 CGTGTGGGCAACCGTGTGTGTGCATATGAGTGCGAGTGTGTGTGCGTGTGAATCAGCATGTAAGCTACTGTGTGCATGA----GTGTA---ACGCTAGTGT--------------GTGTACATGCATGTGTGTGTGAGCTTGTGTGTCTGCATGTGAGCAAGTGTGTAT s panTro4.chr17 185056 150 + 82630442 ggtgtgggcaactgtgtgtgtgcatatgagtgcgagtgtgtgtgcgtgtgaatgagcatgtaagctactgtgtgcatgagtgtgtgtA---ACGCTAGTGC--------------GTGTACATGCA--tgtgtgtgagcttgtgtgtctgcatgtgagcaagtgtgtat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 73946 159 + 73212453 tgtgtgggcaactgtgtgtgtgcgca-gagtgcgagtgtgtgtgcgtgtgaatgagcatgtgagctactgtgtgcatgt----gtgta---aagccagtgtacatgtacatgtgaatgtgtgtgca--tgtgtgtgagcttgtgtgtctgcatgtgagcaagtgtgtgt i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 112757 98 + 74645514 ---------------------------taaagctagtgtgtgtgcgcacgtgtgaa------------tgtgtgcgtgt----gtgt----------gtgt--------------gtgtgagtgcg--agtgtgtgagcttgtgtg--tgcatgtgggtgtgtgtgtag i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918351 139 - 1291538 cgtgtgggcaagtgtgtgtgcac----gagtgcgagtgtgtgtgA----AGATAAGCATGTGAGCTATtgtgtgcacgt----gtgtgtacatgcaagtgt--------------gaatgtgtgcg--agtgtgagagcatgtgtg--tgcatgtgagcaagtgcatat i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=3323.000000 s hg38.chr17_GL383563v3_alt 196614 48 + 375691 GCATGT---------------------------------------------------------------------------------------------GGATATGAGTGTGTGTATGTGGAT--GTGTGTGTGGATGTGAGC s panTro4.chr17 185206 141 + 82630442 gcatgtgtgcatgtcagcgtgtatgtgtgtgcatgtggatgtgtgtgtgtgcatatggattcagtgtgtgtgtggatatgtgtgcatgtgtgtgcatgtggatatgagtgtgtgtatgtggat--gtgtgtgtgGATGTGAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 74105 33 + 73212453 gcatgt---------------------------------------------------------------------------------------------------gggtgtgtgcgtgtggat-----------ggtgtgtgc i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 112855 44 + 74645514 gtgtga---------------------------------------------------------------------------------------------------gcgtgtgtgaatgtggatgtgtgtgtgtgggtgtgagc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=5152.000000 s hg38.chr17_GL383563v3_alt 196662 26 + 375691 AC-TATGTGTGCATGTGGATGTGTGTG s panTro4.chr17 185347 27 + 82630442 ACCTATGTGTGCATGTGGATGTGTGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 74138 25 + 73212453 ac--gtgtgtgcatatggatatgtgtg i ponAbe2.chr17 C 0 I 137 e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 112899 0 + 74645514 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M a score=937.000000 s hg38.chr17_GL383563v3_alt 196688 10 + 375691 CATAAATGTG s panTro4.chr17 185374 10 + 82630442 CATAAATGTG i panTro4.chr17 C 0 M 337 e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 112899 0 + 74645514 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 74163 137 + 73212453 I a score=0.000000 s hg38.chr17_GL383563v3_alt 196698 132 + 375691 CGTGCGCAAGTGTGTGTAGACGTGTGTGTACAtgtggatgtgtgtgtggatgtgtgtgtCCATGTGGATGTGTGTGTGCACATGGATGTGTCTGTGTGTACGTGGATGTCTGTGTGTGTGGATGTGAGCGTG e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 112899 0 + 74645514 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e ponAbe2.chr17 74163 137 + 73212453 I e panTro4.chr17 185384 337 + 82630442 M a score=4488.000000 s hg38.chr17_GL383563v3_alt 196830 87 + 375691 TGTGTCCATGTGGATGTGTGTGTGCGTGTGGATGAGAGCATGTGTGTGTGCACGTGGATGTCAGTGTGTGTGT----ACgtggg----tgtgtgt s ponAbe2.chr17 74300 86 + 73212453 TGTGTCAATGTGGAtgtgtgtgtgcatgtgaatg--------tgtgtgtg-atgtggatgtcagtgtgtgtgtgtggatgtgagcatgtgtgtgt i ponAbe2.chr17 I 137 C 0 e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e papAnu2.chr16 112899 0 + 74645514 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 185384 337 + 82630442 M a score=8723.000000 s hg38.chr17_GL383563v3_alt 196917 64 + 375691 gtggatgt--gtgtgtggatgtggatgtcagtgtgtgtgtgtggatgt--------gagtgtgtatgtgGATGT s ponAbe2.chr17 74386 60 + 73212453 gtgggtatcagtgtgtgtacgtggatgt------gtgtgtgtggatgt--------gtgtgtccatgtggatgt i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 112899 63 + 74645514 ----------gtgtgtgaatgtggatgt-ggattgtgtgtgtgggtgtgagcgagcgtgtgtgcatgtggatgt i papAnu2.chr16 C 0 C 0 e mm10.chr11 75851615 1150 + 122082543 I e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 185384 337 + 82630442 M a score=2940.000000 s hg38.chr17_GL383563v3_alt 196981 11 + 375691 CAGTGTGTGTG s ponAbe2.chr17 74446 9 + 73212453 --gtgtgtgcg i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 112962 11 + 74645514 cagtgtgtgtg i papAnu2.chr16 C 0 C 0 s mm10.chr11 75852765 11 + 122082543 CAGGGTACAGG i mm10.chr11 I 1150 C 0 e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 104629 3872 + 80904711 I e macFas5.chr16 97638 16729 + 80997621 M e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 185384 337 + 82630442 M a score=10658.000000 s hg38.chr17_GL383563v3_alt 196992 29 + 375691 TGTGGATGTCAGTGTGTGTGTGGATATCA s ponAbe2.chr17 74455 29 + 73212453 tgtgaatgtatgtgtgtatgtggctgtca i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 114374 29 + 80997621 tgtggatgtcagtgtgtgtgtgggtgtga i macFas5.chr16 M 16729 C 0 s papAnu2.chr16 112973 25 + 74645514 ----catgtggatgtgtgtgtaggtgtga i papAnu2.chr16 C 0 C 0 s mm10.chr11 75852776 27 + 122082543 TCTGCTAGTGAGTGTGTGTGTGAACAT-- i mm10.chr11 C 0 C 0 e canFam3.chr9 15677233 0 - 61074082 C e calJac3.chrUn_GL286409 918490 0 - 1291538 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 104629 3872 + 80904711 I e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 185384 337 + 82630442 M a score=10820.000000 s hg38.chr17_GL383563v3_alt 197021 52 + 375691 GTATGTGTGTGT----------GCATGGTGATGTGTGTGTAGGTGT-----GAGCGTGTGTCAATGC s ponAbe2.chr17 74484 49 + 73212453 gt---tgtgtgt----------gcatgttgatgtatgtgtaggtgt-----gagcgtgtgtcaatgc i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 114403 51 + 80997621 g----ggtgtgt----------ggatgtggatgtgtgtgtgttttt--ggtgtgtgagtgtctatat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 112998 53 + 74645514 g----cgtgtgt----------ggatgtggatgtgtgtgtgtgtgtggggtgtgtatgtgtctatat i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918490 38 - 1291538 ------gtatgt------------------atgtgtgcacatgtgg-----gtgcaagagactgtat i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75852803 52 + 122082543 ------ATGTGCCAATCTACACGCATGTAAACATATGTGTGCCTGT---------GGATGTTTATGA i mm10.chr11 C 0 C 0 e canFam3.chr9 15677233 0 - 61074082 C e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 104629 3872 + 80904711 I e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 185384 337 + 82630442 M a score=3950.000000 s hg38.chr17_GL383563v3_alt 197073 28 + 375691 GGT-TGTGTTTGTGTGCGTGGA----TGTGAGT-- s ponAbe2.chr17 74533 32 + 73212453 ggt-tgtgtgtgtggatgtgagcatgtgtgtgt-- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 114454 24 + 80997621 gga-tgtgtgtatgtagg--------tgtgacc-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 113051 24 + 74645514 gga-tgtgtgtatgtagg--------tgtgagc-- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918528 28 - 1291538 gca-agtgtgtgtgtgtgtgtg----tgtgcgt-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75852855 17 + 122082543 GCAgtgtgtgtgtgtat------------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15677233 28 - 61074082 ---GGGTGTGTCTGTATGTGTG----TGTGCATGG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e rheMac3.chr16 104629 3872 + 80904711 I e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 185384 337 + 82630442 M a score=14198.000000 s hg38.chr17_GL383563v3_alt 197101 9 + 375691 GTGTGTGTA--- s ponAbe2.chr17 74565 9 + 73212453 gtgtgtgta--- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 108501 9 + 80904711 gtgtgcgtg--- i rheMac3.chr16 I 3872 C 0 s macFas5.chr16 114478 9 + 80997621 gtgtgcgtg--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 113075 9 + 74645514 gtgtgcgtg--- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918556 9 - 1291538 gtgtgtgtg--- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75852872 9 + 122082543 gtgtgtgta--- i mm10.chr11 C 0 C 0 s canFam3.chr9 15677261 10 - 61074082 --ATGCGTGCTC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e nomLeu3.chr19 137274 62135 - 81552678 M e panTro4.chr17 185384 337 + 82630442 M a score=605460.000000 s hg38.chr17_GL383563v3_alt 197110 500 + 375691 TGCCCTGACTTGGAGCAGACGGGGCAGTGGCAGCTCTTGAAGTGGGGCATAGGCCACAGCTGCCCCCACAGGCCTTCAGCCTCTCCGGCTCAACTGGCTCCAAGCAGCATTTTAAACCCACAGGTGTCCACCAGCT--TC--TGCTCCCACT--GTCTGAGGGACATGGACAGATCTCG--AGGGCT-CAGCAGGAGAAGGTCTGAGGTCCAAGGGT-------GGCAGAGGGACCAGGTGGAGGA--CCGCCACTTCTCCAGCCAATCTCGGGCCACTCAGTTCCAGGCTGGGCAGCCACAGTGCCCCT-CAGGCCAGTGTCCCAGCCAGG------CCTGCACCCCCTCCTCCTG-AGGGACTCCCCGCCTGCATGGTCTCCA-CTGCATTGCATCCCACGGTCCCCACCAATGTCTGTCCGTGGCAGCGA-----TGTC---GGGGGTGAACTCATAGGCAGCAGAGGTGTACGCAGCATCCGGTAGG-------ACCAGCGAGGAGAGGCTGCTAT-GAGGGAGTCGGGG--TGC-TGAGGA s panTro4.chr17 185722 407 + 82630442 TGCCCTGACTTGGAGCAGACGGGGCAGTGGCAGCTCTTGAAGTGGGGCATAGGCCACAGCTGCCCCCACAGGCCTTCAGCCTCTCCGGCTCAACTGGCTCCAAGCAGCATTTTAAACCCACAGGTGTCCACCAGCT--TC--TGCTCCCACT--GTCTGAGGGACATGGACAGATCTCG--AGGGCT-CAGCAGGAGAAGGCCTGAGGTCCGAGGGT-------GGCAGAGGGACCAGGTGGAGGA--CCGCCACTTCTCCAGCCAATCTTGGGCCACTCAGTTCCAGGCTGGGCGGCCACAGTGCCCCT-CA-----------------------------------------------------------------------------------------------------TGTCTGTCCGTGGCAGCGA-----TGTC---GGGGGTGAACTCACAGGCAGCAGAGGTGTATGCAGCATCCGGTAGG-------ACCAGCGAGGAGAGGCTGCTAT-GAGGGAGTCGGGG--TGC-TGAGGA i panTro4.chr17 M 337 C 0 s ponAbe2.chr17 74574 503 + 73212453 tgCCCTGACTTGGAGCAGACGGGGCAGTGGCAGCTCTTGAAGTGGGGCGTAGGCCACAGCTGCCCCCACAGGCCTTCAGCCTCTCTGGCTCAACTGGCTCCAAGCAGCATTTTAAACCCACAAGTGTCCACCAGCT--TC--TGCTCCCACT--GTCTGAGGGACATGGACAGATCTCGATAGGGCT-CAGCAGGAGAAGGCCTGAGGTCCGAGGGT-------GGCAGAGGGACAAGGTGGAGGA--CCGCCACTTCTCCAGCCAATCTCTGGCCACTCACTTCCAGGCTGGGCGGCCACAGTGCCCCT-CAGGCCAGTGTCCCAGCCAGG------CCTGCACCCCCTCCTCCTG-AGGGACTCCCCACCTGCCTGGTCTCCA-CTGCATTGCATCCCACAGTCCCGACAAATGTCTGTCCGTGGCAGCGA-----TGTT--GGGGGGTGAACTCACAGGCAGCAGAGGTGTACGCAGCATCCGATAGG-------ACCAGCGAGGAGAGGCTGCTAT-GAGGGAGTCGGGG--TGC-TGAGGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 108510 496 + 80904711 tgCCCTGACTTGGAGCAGCCGGGGCGGTGACAGCTCTGGAAGGGGGGCGTAGGCTACAGCTG-CCCCACACGCCTTCAGCCTCCCCTGCTCTACGGGCTCCAAGCAGCATTTTAAACCCGCAGGTGTCCACCAGCT--TC--TGCTCCCACT--GTCTGCGGGACGTGGACAAACGTC---AGGGCT-CAGCA-GAGAAAGCCGGGGCTCCGAGGGTGG---CCGGCAGAGGCAACAGGTGGAGGA---CGCCCCTTCCCCAGCCAATC---GGACACTCAGTTCCAGGCTGGGCGGCCATGGTGCCCCT-CAGGCCAGTGTCCCAGCCAGG------CCTGCA-CCCCTCCTCCTG-AGGGACCTGCCGCCTGCCCGGTCTACA-CTGCACTGCATCCCACGGTTCCCACAGAAGTCTGTGCATGGCAGCGA-----TGTC--GCGGGCTGAATTCACC-GCCGCAGAGGCGTCCACGGCGTCCGGGAGG-------ACCAGCGAGGAGCGGCTGCTAC-GAGGGCACCGGGG--TGC-TGAGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 114487 496 + 80997621 tgCCCTGACTTGGAGCAGCCGGGGCGGTGACAGCTCTGGAAGGGGGGCGTAGGCTGCAGCTG-CCCCACACGCCTTCAACCTCCCCTGCTCTACGGGCTCCAAGCAGCATTTTAAACCCGCAGGTGTCCACCAGCT--TC--TGCTCCCACT--GTCTGCGGGACGTGGACAAACGTC---AGGGCT-CAGCA-GAGAAAGCCGGGGCTCCGAGGGTGG---CAGGCAGAGGCACCAGGTGGAGGA---CGCCCCTTCCCCAGCCAATC---GGACACTCAGTTCCAGGCTGGGCGGCCACGGTGCCCCT-CAGGCCAGTGTCCCAGCCAGG------CCTGCA-CCCCTCCTCCTG-AGGGACCTGCCGCCTGCCCGGTCTACA-CTGCACTGCATCCCACGGTTCCCACAAAAGTCTGTGCATGGCAGCGA-----TGTC--GCGGGCTGAATTCACA-GCCGCAGAGGCGTCCACGGCGTCCGGTAGG-------ACCAGCGAGGAGCGGCTGCTAC-GAGGGCACCGGGG--TGC-TGAGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 113084 421 + 74645514 tgCCCTGACTTGGAGCAGCCGGGGCGGTGACAGCTCTGGAAAGGGGGCGTAGGCTGCAGCTG-CCCCACAGGCCTTCAGCCTCCCCTGCTCTACTGGCTCCAAGCAGCATTTTAAACCCTCAGGTGTCCACCAGCT--TC--TGCTCTCACT--GTCTGCGGGACGTGGACAAACCTC---AGGGCT-CAGCAGGAGAAAGCCTGGGCTCCGAGGGTGG---CAGGCAGAGGCACCAGGTGGAGGA---CGCCCCTTCCCCAGCCAATC---GGACACTCAGTTCCAGGCTG-------------------------------------------------------------------------------------GGTCCACA-CTGCACTGCATCCCACAGTCCCCACAAAAGTCTGTGCATGGCAGCGA-----TGTC--GCGGGCTGAATTCACA-GCCGCAGAGGCATCCACGGCGTCCGGTAGG-------ACCAGCGAGGAGCGGCTGCTAC-GAGGGCACCGGGG--TGC-TGAGGA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 918565 488 - 1291538 tACTCTGACTTGGAGCAGACCAGACAGTGTCAGCTCTTGAAGTGGGGTTTAGGCCACAGCTGCCCCCAAGGACCTTCAGCTTCTCCCGTTCAACTGGCTCCAAGCAGCATTTCAAACCCACAAGTGTCCACCAGCTTCTC--TGCTCCCACG--TTCCGAGGAACATGGATGAATCTCGATAGGG-T-CAGCAGGTGAAAGCCTGAGCTCCGAGGGT-------GTCAGAGGGACCGGGCAGAGGA--CTGCCACTTCTCCAGCCCATCTGTGGCCA-TCCCTTCCAGGCTGGGCAGCCATGGTGCTCCT-CAGGCCAGTGTCCCAGCCAGG------CCTGCATGCCCTCCTCCCACAGGGACTCTCTGCCTGCCTGCTCTCCG-CTGCCTCACATCCCAC-------------GTCTGTCCGAGGCAGCAC-----TGTC--AGGGGGTGAAC-CACA-GGCACAGAGGTGTACACAGCATATGGCAGG-------GCCAGCGAGAAGACGATGCTAT-GAAGGAGCC-GGG--TGC-AGAGGA i calJac3.chrUn_GL286409 C 0 I 5 s mm10.chr11 75852881 438 + 122082543 tgtgCTGATTGGGAGCAGGT-GGGTAGTAAGGAC-----AATGGGCACTTGGG----------TCCCTCAGGCCTT----TTCATAGGC-------ACTCATAGCAACCGTCTGAACCTGCTG--GTCCATTAGCA--TC--TGTTC----------------------ACAGACCTC---AGACTT-TCTTT------AGACTGTGGGATAAGGATGTCCCCAGAGAGAGGGACAGGATGGAAGA--------------------------GGC---------TCAGGCTCAGTGGCTATGACCTCCCTGTGAGGCAGTGTCCCAACCGGGCTGTTCCCCTCGGACCCCCTACCTATAAGGACT--CCACAGGCCAGGTCTTCACCTGCATTCAACCCTGCACCCCACACACTTGTTTGTG-ATGTCAGGGAAAGCTAGAC--ATGGGTCTGAGTCATGCCAGGAAGAGCTGCAGGCATCAGGATGGAGGGAGGCACAGCTGCGAGGAGGGACAGCTGC-GAAAGCGCCAAGT--GACACGAGGA i mm10.chr11 C 0 C 0 s canFam3.chr9 15677271 406 - 61074082 TGTGCTGAGTCTGAGCAGACAGGGCC-------------------------------------CCCCAC-------------------CTCAACCCACTTGAAGCCACATTGT-------------TTCCCTAGCT--GCAATGTCCCCCCTGAGCCCGAAGGACAAAGATGTGCTCTGACAGGGATGGGGCAGGAGAAAGCCCCAGCT-CAAGGGT-------GGAAATGGGACTGAGTAGAGGAGGGAGCCCCTTCCCCATCAAACC----------CCATTTCGGGCTC-----------CTCTCCTGGGGGCCA--GTCCCAGCAGGG------CTTG---CTCCTCTGCCTG-------------CCGGCCCAGGGCCCACCCGCACTTG--CCCACAGT-CCTACAAGGGCTTTGCCGTGGCAGTGA-----TGGCAGGAGAGGCAAACTTATGGGAATGAGAAGTGCAAATGGAGTCCGACAGA-------ATTAGGGAGGAGGGCCCTTTGCAGAAAGAGCCGGGGGATGC-TGAGGA i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e nomLeu3.chr19 137274 62135 - 81552678 M a score=483160.000000 s hg38.chr17_GL383563v3_alt 197610 388 + 375691 CAAAGTGCCTGCAGGCTGCACACCAAGGCACAG---ATGCCGACC-----TACCTGGCAGGTCCA-CGTATGGGGGATTTATACCTTCT-ACATA-CATCACTGGACAACTTTCACATGTTCGTAATAAACATGCATTACTTTTGTAACA----AGAAAAAACAGCCCGAATGACATAAAGATGGTCAGATGTCAGGTCACAA-CCGAAGACCAGGATGTCGCAAAGCCCCTGAGAAGCGGCCGCCAGGTCTATTGTGATGGGTCCACTTCCTCCAAGACGAGCCATGATCCGAACGAGCCTCCCT-CACCCCTCTG--CCTG--CCGTCTCATCTAAGACCCTCAGACCCTGAGTATTTGGCAGAAACGTGAGCACTTCAgagcaaaaggacccagatgccagagagg s panTro4.chr17 186129 388 + 82630442 CAAAGTGCCTGCAGGCTACACACCAAGGCACAG---ATGCCGACC-----TGCCTGGCAGGTCCA-CGTATGGGGGATTTATACCTTCT-ACATA-CGTCACTGGACAACTTTCACATGTTCGTAATAAACATGCATTACTTTTGTAACA----AGAAAAAAAAGCCCGAATGACATAAAGATGGTCAGATGTCAGGTCACAA-CCGAAGACCAGGATGTCGCACAGCCCCTGAGAAGCGGCCACCAGGTCTGTTGTCACGGGTCCATTTCCTCCAAGATGAGCCATGATCCGAATGAGCCTCCCT-CACCCCTCTG--CCTG--CCGTCTCATCTAAGACCCTCAGACCCTGAGTATTTGGCAGAAACGTGAGCACTTCAGAGCAAAAGGACCCAGACACCAGAGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 75077 388 + 73212453 CAAAGTGCCTGCAGGCTGCACACCAAGGCACAG---ATGCCGATC-----TGCCTGGCAGGTCCA-CGTATGGGGGATTTATACCTTCT-ACATA-CGTCATTGGACAACTTTCACATGTTCGTAATAAACATGCATTACTTTTGTAACA----AGAAAAAAAAGCCCGAATGACATAAAGATGGTCAGATGTCAGGTCACAA-CCAAAGACCAAGATGTCCCACAGCCCCTGAGAAGCGGCTGCCAGGTCTATTGTCATGGGTCCACTTCCTCCAAGACGAGCCATGATCCGAATGAGCCTCCCT-CACCCCTCTG--CCTG--CTCTCTCATCTAAGACCCTCAGACCCTGAGTATTTGGCAGAAACATGAGCACTTCAGAGCAAAAGGACCCAGACACCAGAGAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 109006 383 + 80904711 CAGACGGCCTGCAGGCTGCACGCCACGGCACGG---ATGCCGACC-----TACCTGGGAGGTCCA-GGGATGAGGGATTTGTA-CTTCT-ACATA-CGTCGCTGGACAACTTTCACATGTTTGTGCTAAACACGCATTACTGTTGTAGCA----AAAAAAAAAAGCCCGAATGACATAAAGATGGTCAGACGTCAGGTCACAA-CCGAAGACCAAGATGTTCCACAATCCCTGAGCAGCGGCCACCAGGTCTATCGTCCCAGGTCCA-TTCCTCCAAGATGAGCCATGATCCGAATGAGCCTCCGT-CCCCGCTCTG--CCTG-----TCTCATCTAAGACCCTCAGACTCCAAGTATCCGGCTGAAACGTGAGCACTTCAGAGCAAGAGGACCCGGACACCAGAGAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 114983 383 + 80997621 CAAACGGCCTGCAGGCTGCACGCCACGGCACGG---ATGCCGATC-----TACCTGGGAGGTCCA-GGGATGAGGGATTTGTA-CTTCT-ACATA-CGTCGCTGGACAACTTTCACATGTTTGTGCTAAACACGCATTACTGTTGTAGCA----AAAAAAAAAAGCCCGAATGACATAAAGATGGTCAGACGTCAGGTCACAA-CCAAAGACCAAGATGTTCCACAGTCCCTGAGCAGCAGCCACCAGGTCTATTGTCCCAGGTCCA-TTCCTCCAAGATGAGCCATGATCCGAATGAGCCTCCGT-CCCCGCTCTG--CCTG-----TCTCATCTCAGACCCTCAGACTCCAAGTATTCGGCTGAAACGTGAGCACTTCAGAGCAAGAGGACCCGGACACCAGAGAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 113505 357 + 74645514 CAA--------------------------ACGG---ACGCCGATC-----TACCTGGGAGGTCCA-GGGATGAGGGATTTGTA-CTTCT-ACATA-CGTCGCTGGCCAACTTTCACATGTTTGTGCTAAACACGCATTACTTTTGTAGC-----AAGaaaaaaaGCCTGAATGACATAAAGATGGTCAGACGTCAGGTCACAA-CCAAAGACCAAGATGTTCCACAGTCCCTGAGCAGCGGCCACCAGGTCTATTGTCCCGGGTCCA-TTCCTCCAAGATGAGCCATGATCCGAATGAGCCTCCGTCCCCCGCTCTG--CCTG-----TCTCATCTAAGACCCTCAGACTCCAAATATTCGGCTGAAACGTGAGCACTTCAGAGCAAGAGGACCCAGACACCAGAGAGG i papAnu2.chr16 C 0 C 0 s mm10.chr11 75853319 318 + 122082543 ---------CGAAAATTACCTGAGAAGGGACAGCCAGTACCTAACATGGATGTTTGCAAGGGTGA-CTCACAGGGGTCTTGT--CTCCTGGGACC-TGCTGCTTGGTGACCTTTAATTTTCTATCACAAACATGTGTTACTCTTTTGATA----AGGAAAAAAACAGCACACGACATGAAGAGA-------GTCGGGTCACC-----------------TCCCGAAGCCCTTCCAAAGCTGCTGCCAGGCCTGTGATCTTGAG-CTACCTCTTCTGTGACAAGCCACCAGCAGGTGTA----CCCT-CACCCTTCTGGCCCTG----------------------------------------TGAAGTGTGGCCCCTACAGGGCAGAAGAAGCCAGACCCAAGG---- i mm10.chr11 C 0 C 0 s canFam3.chr9 15677677 353 - 61074082 ---GATTTCAGGAGAACAGAGGCCCAGCTGTTA---ATACCAGTC----CTGTCTGAAGGGGCTGCCCTATAGCAGATTTTTACCTTCT-ACATAGTATCATTTGACAACCTTCAACACTTTATAATAAACACACCTTACTTTTGCAACAAGAGAGGAAAAAAAGCCCAAACGAGATAAAGAT----AGATGCCAACTCATAATCCAAAGACAGAAATCTCTAAGAGCCCTTCACGTCTGCCTGCCCGCCCCAGCATC------------------AGGTAAGCCG------------------CT-TGTCCCTCTG--ACTGCTCTCTCTCATTAAGGACCCTCAGTCTCTAAGTCTTGGGCTGAAACTTGGACCCTTTAGGACAgaaggagccagggcccagagg-- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 919053 5 - 1291538 I e chlSab2.chr16 102364 0 + 75148670 C e nomLeu3.chr19 137274 62135 - 81552678 M a score=41598.000000 s hg38.chr17_GL383563v3_alt 197998 22 + 375691 gtaagagcctgcccttggatcc s panTro4.chr17 186517 22 + 82630442 GTAAGAGcctgcccttggatcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 75465 22 + 73212453 GTaagagcctgcccttggatcc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 109389 22 + 80904711 GCgagagcctgcccttggatcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 115366 22 + 80997621 GCgagagcctgcccttggatcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 113862 22 + 74645514 GCGAGAGCCTGCCCTTGGATCC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 919058 22 - 1291538 GTAACAGCCTGCCCCCAGATCC i calJac3.chrUn_GL286409 I 5 C 0 s mm10.chr11 75853637 21 + 122082543 GGAAGGGCCGGGTCTGGAGCC- i mm10.chr11 C 0 C 0 s canFam3.chr9 15678030 22 - 61074082 acaggacgctgccttttggtct i canFam3.chr9 C 0 C 0 e chlSab2.chr16 102364 0 + 75148670 C e nomLeu3.chr19 137274 62135 - 81552678 M a score=115976.000000 s hg38.chr17_GL383563v3_alt 198020 46 + 375691 cagctcggccacacacctgccgaggaagtccctcctcttctctgag s panTro4.chr17 186539 46 + 82630442 cagctcggccacacacctgccgaggaagtccctcctcttctctgag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 75487 46 + 73212453 cagctcggccacacacctgccgaggaagtccctcctcttctctgag i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 109411 46 + 80904711 cagctcggccacacgcctgctgagagagtccctcctctcctctgag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 115388 46 + 80997621 cagctcggccacacgcctgctgagagagtccctcctctcctctgag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 113884 46 + 74645514 CAGCTCGGCCACACGCCTGCTGAGAGAGTCCCTCCTCTCCTCTGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 102364 45 + 75148670 CAGCTCGGCCACACACCTGCTGAGa-aatccctcctctcctctgag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 919080 44 - 1291538 CAGCTCAGCCACA--CCTGCCAAGGGAGCCCCTCCTGTCctctgag i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75853658 22 + 122082543 CAGCTCTGGCCTGCACC------------------------CTGGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15678052 46 - 61074082 cagctcagccatacaggggctcagtaagtgcctcctcttcttgggg i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 137274 62135 - 81552678 M a score=1697128.000000 s hg38.chr17_GL383563v3_alt 198066 619 + 375691 ccgcaggtacacccatctataaaatgcagtcattaaataa---------------cttccgagcctgttgtgagaccaggaactttg-aaataaaaccacaaacatcaaagcatcatgaaagctgcggagAACGGTCCACAAC--CAGG--CGCCCCCATCG----TT---GCCAAGT----------GGGGCGGCCACCTGAGACACACACACCTTACTGTAGCCACCA-GAACGCCCA----GGGACACTGGGATACAAAGTCACCATACTTATTAGGACCAGGGAAGCCAGGAGTCCTCCCTTACCGAGACACAAGGCAAGTG-------------------CCAGGAAGAGATGG----------------------------------TGAGG-----------------GCCTGCCTGGG------AAAGATGTAGGTTTTATACTTTGCAAAATACCT---TAATTGACGTCCCATTTCTGTGAAGATGCGTAGTGCTGCTCATGGCATCCTTGCCCCCAGAGCAGTACTTGTATGTGATACTGCCCCCCGTGGGCCCTCCCGCCGCACTCCTGCACAGAGCGAACAGTCACC---TGCTGGAGGTCCCCGCTGCTC---AC------------------------------------TCGGGAGAAGGTGTGGAGCTGAGGGCACAGGGAGGGACGCATCACCAGAATGAGCCTCGTGGATGGAGGGTGC-GGGGGA--CTGGCCTTGTGCCTGCAA-ACTGCCGGGCTGGC-TAATGA s panTro4.chr17 186585 618 + 82630442 ccgcaggtacacccatctataaaatgcagtaattaaataa---------------cttccgagcctgttgtgagACCAGGAACTTTG-AAATAAAACCACAAACATCAAAGCATCATGAAAGCTGCGGAGAACGGTCCACAAC--CAGG--CACCCCCATCA----TT---GCCAAGT----------GGGGCGGCCACCTGAGACACACACACCTTACTGTCGCCACCA-GAACGCCCA----GGGACACTGGGGTACAAAGTCACCATACTTATTAGGACCAGGGAAGCCAGGAGCCCTCCCTTACCGAGACACAAGGCAAGTG-------------------CCGGGAAGAGATGG----------------------------------TGAGG-----------------TCCTGCCTGGG------AAAGATGTAGGTTTTATACTTTGCAAAATACCT---TAATTGACGTCCCATTTCTGTGAAGATGCGTAGTGCTGCTCATGGCATCCTTGCCCCCAGAGCGGTACTTGTATGTGATACTGCCCCCCGTGGGCCCTCCCGCCGCACTCCAGCACAGAGCGAACAGTCACC---TGCTGGAGGTCCCCGCTGCTC---AC------------------------------------TCGGGAGAAGGTGTGGAGCTGA-GGCATGGGCAGGGACGCATCACCAGAGTGAGCCTCGTGGATGGAGGGTGC-GGGGGA--CTGGCCTTGTGCCTGCAA-ACTGCCGGGCTGGC-TAATGA i panTro4.chr17 C 0 I 261 s ponAbe2.chr17 75533 633 + 73212453 ccgcaggtacacccatctataaaatgcagtcattaaataactgccctgac--caccttccgagcctgttgtgagaccaggaactttgaaaataagaccacaaacatcaaagcatcatgaaagctgcggagagtggtccacaaC--CAGG--CGCCGCCATCA----TT---GCCAAGT----------GGGGCGGCCACCTGGGACACACGCACCTTAGTGTAGCCACCA-GAATGCCCA----GGGACACTGGGGTACAAAGTCATCATACTCATTAGGACCAGGGAAGCCAGGCGTCCTCCCTTACTGAGACCCAAGACAAGTG-------------------CCAGGAAGAGATGG----------------------------------TGAGG-----------------GCCTGCCTGGG------AAAGATGCAGGTTTTATACCTTGCAAAATACCT---TAATTGACGTCCCATTTCTGTGAAGACGCGCAGTGCTGCTCATGGCATCCTTGCCCCCAAATCAGTACTTGTATGTGAAACTGCCCCCCGGGGGCCCTCCCGCCGCACTCCTGCACAGAGCGAACAATCACC---TGCTGGAGGTCCCCGCTGCTC---AC------------------------------------TCGGGAGAAGGTGTGGAGCTGAGGGCACAGGGAGGGACGCATCACTAGAATGAGCCTCGTGGATGGAGGGTGC-GGGGGA--CTGGCCTTGTGCCTGCAA-ACTGCCGGGCTGGC-TGATGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 199428 653 - 81552678 CCGCAGGTACAcccatctataaaatgcagtcattaaataactgccctgac--caccttccgagcctgttgtgagACCAGGAACTTTGAAAATAAAACCACAAGCATCAAAGCATCACGAAAGCTGCGGAGAGCAGTCCACAAC--CAGG--T-------CCA----CT---GCCAAGT----------GGGGCGGCCACCTGGGACACACACACCTTAATGTAGCCACCA-GAACGCCCA----GGGACACTGGGGCACAAAGTCACCATACTAATTAGGACCAGGGAAGCCAGGAGTCCTCCCTTACTGAGACACAAGACAAGAG-------------------CCAGGAAGAGGTGG----------------------------------TGAGG-----------------GCCTGCCTGGG------AAGGATGCAGGTTTTATACTTGGCAAAATACCT---TAATTGACATCCCATTTCTGTGA--------AGTGCTGCTCATGGCATGCTTACCCCCAAATCAGTACTTGTATGTGATACTGCTCCCCGT-GGCCCTCCCGCCGCACTCCTGCACAGAGCAAACAAGCACC---TGCTGGAGGTCCCCGCTGCTC---ATCGGGAGAAGGTGTGGAGACGAGGTCCCCGCTGCTCATCGGGAGAAGGTGTGGAGATGAGGGCGCAGGGAGGGACACGTCGGCAGAATGAGCCACGTGGATGGAGGGTGC-GGGGGA--CTGACCTTCTGCCTGCAA-ACTGCTGGGCTGGC-TGACGA i nomLeu3.chr19 M 62135 C 0 s rheMac3.chr16 109457 619 + 80904711 ccacaggtacacccgtctataaaacgcagtcattaaataaccaccctgtc--caccttccgagcctgttgtgaga-caggaacttcgaaaataaaaccacaaacatcaaagcgtcatgaaaactgtggagagcGGCCCACAAC--CAGG--TGCCACCATCA----TT---GCCAAGT----------GGGGAGGCCGCCTGGGACACACGCACCTTAGTGCCGCCACCA-GAACGCCCGCCCCGGGGCACTGGG-CACAAAGTCACCTTACTCATCAGGGCCA-GGAAGCCAGGAGTCCTCCCTTACTGAGACACAAGACAAGCG-------------------CCAGGAAGAGAGGG----------------------------------TGAGG-----------------GCCCGCCTGGG------AAGGATGCAAGTTTTATACTTCGCAAAAAACCT---CAATTGACATCCCACTTCTGTGAAGATGCAGAGCGCCGCTCACAGCACCCTCGCCCCCAGATCAGAACTTGTATGTGAAGGTGCCCCCCGTGGGCCCTCCGGCCGCTCTCCTGCATAGAGCGAACA-TCACC---GGCTGGAGGTCCCCGCTGCTC---AC------------------------------------TCGGGAGAA--------------GGCATGAGGAGGGACGCGTCACCAGAATGAGCCACGTGGATGGAGGGTCC-GGGGGA--CTGGCCTTGTGCCTGCGA-TCTGCCGGGCTGCC-TGACGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 115434 619 + 80997621 gcacaggcacacccgtctataaaacgcagtcattaaataaccaccctgtc--caccttccgagcctgttgtgaga-caggaacttcgaaaataaaaccacaaacatcaaagcgtcatgaaaactgtggagagcGGCCCACAAC--CAGG--TGCCACCATCA----TT---GCCAAGT----------GGGGAGGCCGCCTGGGACACACGCACCTTAGTGCCGCCACCA-GAACGCCCGCCCGGGGGCACTGGG-CACAAAGTCACCTTACTCATCAGGGCCA-GGAAGCCAGGAGTCCTCCCTTACTGAGACACAAGACAAGTG-------------------CCAGGAAGAGAGGG----------------------------------TGAGG-----------------GCCCGCCTGGG------AAGGAGGCAAGTTTTATACTTCGCAAAAAACCT---CAGTTGACATCCCACTTCTGTGAAGATGCAGAGCGCCGCTCACGGCACCCTCGCCCCCAGATCAGAACTTGTATGTGAAGGTGCCCCCCGTGGGCCCTCCGGCCGCTCTCCTGCATAGAGGGAACA-TCACC---GGCTGGAGGTCCCCGCTGCTC---AC------------------------------------TCGGGAGAA--------------GGCATGAGGAGGGACGCGTCACCAGAATGAGCCACGTGGATGGAGGGTCC-GGGGGA--CTGGCCTTGTGCCTGCGA-TCTGCCGGGCTGCC-TGACGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 113930 618 + 74645514 CCACAGGTACACCCGTCTGCAAAACGCAGTCGTTAAATAACCACCCTGTC--CACCTTCCGAGCCTGTTGTGAGA-CaggaactttgaaaataaaaccacaaacatcAAAGCATCATGAAAACTGCGGAGAGCGGCCCACAAC--CAGG--TGCCACCATCA----TT---GCCAAGT----------GGGGAGGCCGCCTGGGACACACACACCTTAGTGCAGCCACCA-GAATGCCCA----GGGGCACTGGG-CACAAAGTCACCTTACTCATCAGGGCCA-GGAAGCCAGGAGTCCTCCCTTACTGAGACACAAGACAAGCG-------------------CCAGGAAGAGAGGG----------------------------------TGAGG-----------------GCCCGCCTGGG------AAGGACGCAGGTTTCATACTTCGCAAAAAACCT---CA-TTGACATCCCATTTCTGTGAAGATGCAGAGTGCCGCTCACGGCACCCTCACCCCCAGATCAGAACTTGTATGTGAAGGTGCCCCCCGTGGGCCCTCCGGCCGCTCCCCTGCACAGAGCGAACA-TCA-C---GGCTGGAGGTCCCCGCTGCTC---AC------------------------------------TCAGGAGAAGGTGTGCAGCCGAGGGCACGAGGAGGGACGCGTCACCAGAATGAGCCACGTGGATGGAGGGTAC--GGGGA--CTGGCCTTGGGCCTGCGA-T--------CTGCC-TGACGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 102409 629 + 75148670 ccacaggcacacccgtctataaaacacagtcgttaaataaccgccctgtc--cgccttccgagcctgttgtgagaccaggaactttgaaaataaaaccacaaacatcaaagcatcatgaaaactgcggagagcggtccacaac--cagg--tgccaccatca----tt---GCCAAGT----------GGGGAGGCCACCTGGGACACACGCACCTTAGTGCAGCCACCA-GAACGCCCGCCCAGGGGCACTGGG-CACAAAGTCACCTTACTTATTAGGGCCA-GGAAGCCAGGAGTCCTCCCTTACTGAGAC-----ACAAGTG-------------------CCAGGAAGAGAGGG----------------------------------TGAGG-----------------GCCTGCCTGGG------AAGGATGCAGGTTTCATACTTTGCAAAAAACCT---CAATTGACATCCCATTTCTGTGAAGATGCAGAGGGCCGCTCACGGCACCCTCGCCCCCAGATCAGAACTTGTATGTGAAGGTGCCCCCCGTGGGCCCTCCGGCCGCTCTCCTGCACAGAGCGAACA-TCACC---GGCTGGAGGTCCCCGCTGCTC---AC------------------------------------TCAGGAGAAGGTGTGCAGCCGAGGGCACGACGGGGGACGCATCACCAGAATGAGCCACGTGGATGGAGGGTAC-GGGGGA--CCGGCCTTGTGCCCGCGA-TCTGCCGGGCTGCC-TGACGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 919124 595 - 1291538 ctgcgggttcacccatctgt-caatgcagtcattaaataactgcccttcc--caccttctgagcctgctttgagaccaggaactttg-aaataaaaccacaaacatcaaagcctcatgaaagctgtggagagcGGTCCACAAC--CAGA--TTCTGCCACCA----TT---TCCCACT----------GGGGCGGCTGCCTGGGACACACACACCTTAGTGTGGCCACCA-GAATGCCTG------GGCACTGGG-CCCAAAGCCCCCTTACTCATCAGGACCAGGGAAGCCAGGAGTTCCCCCTGACTGAGACAC------AGTG-------------------CCAGGAAGAGACGG----------------------------------TGCGG-----------------GCCAGCCCAGG------AAAGATGCAGGTTTAATAC-----------------------ACACCACGTTTCTGTGAAGACAC--AGTGCTGCTCATGGCCTCCTTGCTCCCGAATCAGTACTTGCATGTGAAACAACCCCCAG-GGACCCTCCCACCACCCTCCTGCACAG-TCAACCA-TCCCT---TGCTGGAAGTCCCCGCTGC-------------------------------------------TCAGGAGCAGGTATGGAGCTGAGGGCACAGGGAGGGGCGCATCACCAGAATGAGCCTCGGGGATGGAGGGCATGGGGGGA--CTGGCCTCGTGCCTGCAA-ACTGCCAGGATGGCTTGACAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75853680 606 + 122082543 CCTCAGGC-TATGTGGCTCTAAGATGCTGCTATTGAATATCCATCCACTCAGAACCTCCTGCCGCTTGTGTGAGACCAGGAAATTTGCAATGAAAACCAGAAACA--GGAGCAGCGC-AGAGCCACACAGAGCCCTCTACAGC----AG--CGGCACAAGCAGTGGCT---GCCAGTC----------ACAGAGG------GGCGCACACCCATCTCTGGATAGTCACTA--------CA-------------GA-TACCAAGTCACCCTGTTCATTAGGACCCAGGA---------TCTCCATTTCCTGAGAAATGAAACAGATGGGTAAAGATGTGCCTCGGACCTGCATGAGAGAGATGATCTGAAAACCCCTGCCAACTGACCAAgggctggggacagctcaccggaagatgcttgcctagtgtgcgcaaggacccgggttccatcctcagcactacaaGCAGACAAAAGACATCCTA--TCCACACAGAGCCACGGTGCTGCTCCT-GCCTCCCCACCCCCAGTTACTGTCCTGCTGGGCAAGCAGTTCCCAAAGGGCCCTGTGGCTGTGTCTCTG--TAGAGTGAGCAATCACTTTGTGTTTGAGGTCAGAGATGCTCTCTGC------------------------------------TCGGGAACACGT-TGGGGCTGAGGACTACAG--------------------GAGCCCCATGGA----------------------------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15678098 607 - 61074082 cctcaggc-tacacattcacaaaa--caggacttaaatacctgccctggt--cacctccggagcctgttgtgagatgagaattttaaaaattaaaatcatgaacatgcaagcctcatgcaagctgtggagggtcatCTACCACATCAGGAATGCTCCCGCTG----GTGGGGCTGAGCTCCCCTTCTGACGGCGGCTGCCCGGGATGCAATCACAGTAGCGTAACCTCCATGAATACCAA----AGGGCCCTGGG-CATGAAGTCATTTTGCTCATTAGGACCAGGGACTCCAGGAGTCTTCCCTTATTGAGATGCAAGACAAGCA-------------------CCAAGAAGAGATGG----------------------------------TACAG-----------------GCCAACTTTGG------AAAGATGCA-TTTTCATACTCTGCAAAAAACCT---TGAGGGA-ATCACATTTCTGCAAAGATCCATAGT---GCTCACAGCATCCCCAGCCCCAAATTAGCGCTTGTTTGTGAAATGGCCTCCAGTGGATCCTCCTGCT---------------TCGAGCAGTCA-C---TGTTCTAAGGCCCCACTGCCC---AC------------------------------------ACAAG------------------GGCACAGGGAGGGACGAAGCACCAGTATGAGCCACCTGGA----GGGTAT-GGCAGACGCTGGCCTGGTGCCCATGGCACTGCCCGGCTAGC-GGACAG i canFam3.chr9 C 0 C 0 a score=908957.000000 s hg38.chr17_GL383563v3_alt 198685 282 + 375691 CCCAAACTTTACAGGCCATCCTGGGAGAGAGG--CAGAGGGGACTTACCTCTTCCTCGGGCCCACGTGTAGATGCGGCTGGTCTCAGAGCTTCTGGGCTCTCGCTCTGCCGGTTCCGTGGGCAAAGGTCGGAAGTGGGGGTCATCAGCTCGGCCAGGGGTCTTCAGGGGCAAGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCCGACCTCTTCCAGACCTGAGTGGGGGAAGAGAGCTGCTTGGGGCACAGGACGCAGAGGAGCCTCCCCT----C----------------------------CTGCTCC s ponAbe2.chr17 76166 281 + 73212453 CCCAAACTTTACAGGCCATCCTGGGACAGAGG--CAGAGGGGACTTACCTCTTCCTCGGGCCCACGTGTAGATGCGGCTGGTCTCGGAGCTTCTGGGCTCTCGCTCTGCTGGTTCCGTGGGCAAAGGTCGGAAGTGGGGGTCATCAGCTCGGCCAGGGGTCTTCAGGGGCAAGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCCGACCTCTTCCAGACCTGAGTGGGGG-AGAGAGCTGCTTGGGGCACAGGACGCAGAGGAGCCTCCCCT----C----------------------------CTGCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 200081 281 - 81552678 CCCAAACTTCACAGGTTATCCAGGGAGACAGG--CAGAGCGGACTTACCTCTTCCTCGGGCCCACGTGTAGGTGCGGCTGGTCTCGGAGCTTCTGGGCTCTCGCTCTGCCGGTTCCGTGGACAAAGGTCGGAAGTGGGGGTCATCTGCTCGGCCAAGGGTCTTCAGGGGCAGGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCCGACCTCTTCCAGACCTGAGTGGAGG-AGAGAACTGCTTGGGGCACAGGACGCAGAGGAACCTCCCCT----C----------------------------CTGCTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 110076 281 + 80904711 CCCAGACGTTACAGGCTGTCCCGGGAGACACG--CAGAGGGGACTTACCTCTTCCTCGGGCCCACGTGTAGATGCGGCCGGTCTCGGAGCCTCTGGGCTCTCGTTCTGCGGGTTCCACTGGCAAAGGTCGGACGTGGGGGTCATCAGCTCGGCCAGGGGTCTTCAGGGGCAAGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCCGACCTCTTCCAGACCTGCGTTGGGG-AGAGAGCTGCTTGGGGCACAGGACTGAGAGGAGTCTCCCCT----C----------------------------CTGCTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116053 281 + 80997621 CCCAGACGTTACAGGCTGTCCTGGGAGACACG--CAGAGGGGACTTACCTCTTCCTCGGGCCCACGTGTAGATGCGGCCGGTCTCGGAGCCTCTGGGCTCTCGCTCTGCGGGTTCCACCGGCAAAGGTCGGACGTGGGGGTCATCAGCTCGGCCAGGGGTCTTCAGGGGCAAGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCCGACCTCTTCCAGACCTGCGTGGGGG-AGAGAGCTGCTTGGGGCACAGGACTGAGAGGAGTCTCCCCT----C----------------------------CTGCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 114548 281 + 74645514 CCCAGACGTTACAGGCTGTCCTGGGAGACACG--CAGAGGGGACTTACCTCTTCCTCGGGCCCACGTGTAGATGCGGCCGGTCTCGGAGCCTCTGGGCTCTCGCTCTGCAGGTTCCACCGGCAAAGGTCGGACGTGGGGGTCATCAGCTCGGCCAGGGGTCTTCAGGGGCAAGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCCGACCTCTTCCAGACCTGCGTGGGGG-AGAGAGCTGCTTGGGGCACAGGACGCAGAGGAGTCTCCCCT----C----------------------------CTGCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 103038 281 + 75148670 CGCAGACGTTACAGGCTGTCCTGGGAGACAGG--CAGAGGGGACTTACCTCTTCCTCGGGCCCACGTGTAGATGCGGCCGGTCTCGGAGCTTCTGGGCTCTCGCTCTGCCGGTTCCACTGGCAAAGGTCGGACGTGGGGGTCATCAGCTCGGCCAGGGGTCTTCAGGGGCAAGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCCGACCTCTTCCAGACCTGAGTGGGGG-AGAGAGCTGCTTGGGGCACAGGACGCAGAGGAGTCTCCCCT----C----------------------------CTGCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 919719 280 - 1291538 CCCTGACTTCAGAGGCTA-CCTGGGAGAGTGG--TGGAGGGGACTTACCTTTTCCTCGGGCCCAGGGGTAGATGCGGCTGCTCTCGGAGCTTCCGGTCTCTCGCTCGGCCGGCTCCACAGGCAAATGCCGGAGGTGGGGATCATCAGCTCGGCCAGGGGTCTTCAAGGGCAAGATATACTTGGGGAGCCCTTTGTAGAACCAGGCCCCTGACCTCTTCCAGACCTGGATGGAGA-AGAGAGCTGCCTGGAGCACAGGATGCAGAGGGGCCTCCCCT----C----------------------------CTGCTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75854286 280 + 122082543 -----------------------------GGG--CAAAGGGTTCTTACCTCTCCCTCGGGCCCATGTGTAGACACGGCTGGTTTCAGCACTCGGAGGCTGTGTTTCTGTGGGCTCCACAGGCAGAGGTCGGAAGTGGGGATCATCAGCCCGGCCAGGGGTTTTCAGGGGCAAGATGTACTTGGGGAGCCCTTTGTAGAACCAGGCCCCTGACCTCTTCCAGACCTGTGAAGGAG-AGACATGTGCTTAGAATACAGGAAGTTGCACCGCCTCCCTT----CCCTGTGTGGTTCTCTCCATGCAGGCCTACTGTTCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15678705 274 - 61074082 ------------TTGCTCTCCCAGTAGAGGGGGCCAGAGGGGACTTACCTCTCCCTCGGGCCCATGTGTAGATGCGACTAGTCTCAATGCTTCTGGGCTTTGGCTCGGTGGGCTCCATGGGCAAAGGTCGGAAGTGGGAGTCATCAGCCCGGCCGGGGGTCTTCAGTGGCAGGATGTACTTGGGGAGCCCTTTGTAGAACCAGGCCCCTGACCTCTTCCAGACCTG-GCAGGGG-TGACATCTGCTTAGAGCAAGGGGTGCAGAGCAGCCTTCCCTGTGCC----------------------------ATGCTCC i canFam3.chr9 C 0 I 43 e panTro4.chr17 187203 261 + 82630442 I a score=227814.000000 s hg38.chr17_GL383563v3_alt 198967 106 + 375691 TTGCCC--------------AGATGACGGGAGGCAGGACGCGGAGAGCTAGGAGCAGAGTGGGAGTGGGAACTCTGGCTCTGCCCTCCCTGGCTGATGGGCT-GGGCTGTCAGTTACCTTC s ponAbe2.chr17 76447 106 + 73212453 TTGCCC--------------AGATGATGGGAGGCAGGACGTGGAGAACTAGGAGCAGAATGGGAGTGGGAACTCTGGCTCTGCCCTCGCTGGCTGATGGGCT-GGGCTGTCACTTACCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 200362 106 - 81552678 TTGCCC--------------AGATGACGggaggcaggacgcggagagctaggagcagagtggcagTGGGAACTCTGGCTCTGCCCTCCCTGGCTGGTGGGCT-GGGCTGTCACTTACCTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 110357 106 + 80904711 TTGCCC--------------AGACGACGGGAGGCAGGACGCGCAGAGCTAGGCGCAGAGTGGGAGCGGGAGCGCTGGCTCTGCCCTCCCCATCTGATGGGCT-GGGCTGTCACTCACCTTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116334 106 + 80997621 TCGCCC--------------AGACAACGGGAGGCAGGACGCGCAGAGCTAGGCGCAGAGTGGGAGCGGGAGCGCTGGCTCTGCCCTCCCCGGCCGATGGGCT-GGGCTGTCACTCACCTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 114829 106 + 74645514 TCGCCC--------------AGATGACGGGAGGCAGGACGCGCAGAGCTAGGCGCAGAGTGGGAGCGGGAACGCTGGCTCTGCCCTCCCCGGCCGATGGGCT-GGGCTGTCACTCACCTTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 103319 106 + 75148670 TCGCCC--------------AGATGACGGGAGGCAGGACGCGGAGAGCGAGGAGCAGAGTTGGAGTGGGAACGCTGGCTCTGCCCTCCCCGGCTGATGGGCT-GGGCTGTCACTCACCTTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 919999 103 - 1291538 TTGCCC--------------AGAGGACGGGAGGC---ACGCAGAGAGCCAGTAGCAGTGTGGGAGTGGgaactctggctctgccctcgctggctgatgggct-gggcagtcacttaccttc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75854566 106 + 122082543 TCATTTCCTGCTTATCAGTGATGTGATGGGGACAAGAAAGCGAGATGCGAG--ACAGAGTACAAATGAGAATTCT-CCTCAGTC--AGCCAGTCAATGGGCTAGAGTTGAC---------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e panTro4.chr17 187203 261 + 82630442 I a score=108126.000000 s hg38.chr17_GL383563v3_alt 199073 26 + 375691 CCAGGACTCAGGA------------------CATGAACTCTCCA s panTro4.chr17 187464 26 + 82630442 CCAGGACTCAGGA------------------CATGAACTCTCCA i panTro4.chr17 I 261 C 0 s ponAbe2.chr17 76553 44 + 73212453 CCAGGACTCAGGACAACTAGGAGCTAAGTCCCATGAACTCTCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 200468 44 - 81552678 CCGGGACTCAGGACAATTAGAAGCTAAGTCCCATGAACTCTCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 110463 44 + 80904711 CCAGGACTCAGGACAACCAGGAGCTAAGTCCCATGAACTCCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116440 44 + 80997621 CCAGGACTCAGGACAACCAGGAGCTAAGTCCCATGAACTCCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 114935 44 + 74645514 CCAGGACTCAGGACAACCAGGAGCTAAGGCCCATGAACCCTCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 103425 44 + 75148670 CCAGGACTCAGGACAACTAGGAGCTAAGTCCCATGAACCCTCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920102 44 - 1291538 ccagaactcagGACAACTTGGAGCTCAGTTCCATGAACTCTCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75854672 40 + 122082543 CCAGAAT---GGACACATTGCAG-TAAGTCCTATGAACTCTGca i mm10.chr11 C 0 I 180 e canFam3.chr9 15678979 43 - 61074082 I a score=406945.000000 s hg38.chr17_GL383563v3_alt 199099 158 + 375691 AACCttctttctctc------------ccttattttagagttgaggacttgctctgctgcccaggctggagtgcagtggtgcagtcatcacccgctgcagcctccacctcctgggctcacgcggtcctcctgcctcagtctcctcagcagctgggactacTGTACCTGGG s panTro4.chr17 187490 157 + 82630442 A-CCttctttctctt------------cgttatgttagagttgaggacttgctctgctgcccaggctggagtgcagtggtgcagtcatcacccgctgcagcctccacctcctgggctcacgcggtcctcctgcctcagtctcctcagcagctgggactacTGTACCTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 76597 158 + 73212453 AACCTCCtttctctc------------ccttattttagagttgaggacttgctctgctgcccaggctagagtgcagtgatgcaatcatcatccgctgcagcctccacctcctgggatcacgccgtcctcctgcctcagcctcctcagcagctggaaccacTGCACCTGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 200512 154 - 81552678 AACCttctttc----------------ccttattttagagttgaggacttgctctgctgcccaggctggagtgcagtggtgcggtcatcacccgctgcagcctccacctcctgggctcacgcggtcctcctgcctcagcctcctcagcagctgggaccacTGCACCTGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 110507 154 + 80904711 AACCTTCtttctctacctctttctctcccttattttagagttgaggacttgctctgttgcccaggctggagtgcagtga----------------tgcagcctctacctcctgggctcacgcggtcctcctgcctcagcctcctcagcagctgggaccacTGCACCTGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116484 142 + 80997621 AACCttctttctcta------------ccttattttagagttgaggacttgctctgttgcccaggctggagtgcagtga----------------cgcagcctccacctcccgggctcacgcggtcctcctgcctcagcctcctcagcagctgggaccacggCACCTGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 114979 154 + 74645514 AAtcttctttctctacctctttctctcccttattTTAGAGTTAAggacttgctctgttgcgcaggctggagtgcagtga----------------tgcagcctccacctcctgggctcacgcggtcctcctgcctcagcctcctcagcagccAGGACCGCTGCACCTGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 103469 154 + 75148670 AACCTCCtttctctacctctttctctcctttattttagagttgaggacttgctctgttgcccaggctggagtgcagtga----------------tgcagcctccacctcctgggctcacgcagtcctcctgcctcagcctcctcagcagccgggacCGCTGCACCTGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920146 158 - 1291538 AACTTtctttctctc------------ccttgttttagagttgaggccttgctctgttgcccaggctggagtgcagtggtgcaatcatcacttactgcagccttgaccttctgggcccaagcagtcctcctgcctcagcctcctcagcagctaaggtcacCGTGCCTGGT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75854712 180 + 122082543 I e canFam3.chr9 15678979 43 - 61074082 I a score=379738.000000 s hg38.chr17_GL383563v3_alt 199257 133 + 375691 TCTACACCTGCTTTAAAGACAAGCCCATGTCCTCCTGCTTCTCTCTTGCAGAGCAGGGATCTCAATATGG----GCCT---GGCATGTGAGACATGTTTATGAAAACCGTCCT-------------CTGTTAC-----CGTC-TGTATCC---ACCACTCGG s panTro4.chr17 187647 136 + 82630442 TCTACACCTGCTTTAAAGACAAGCCCATGTCCTCCTGCTTCTCTCTTGCAGAGCGAGGATCTCAATATGG----GCCT---GGCATGTGAGACATGTTTATGAAAACTGTCCT-------------CTGTTAC-----CGTC-TGTATCCTCCACCACTCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 76755 136 + 73212453 TCTACACCTGCTTTAAAGACAAGCCCATGTCCTCCTGTTTCTCTCTTGCAGAGCGGGGATCTCAATACAG----GCCT---GGCATGTGAGAAATGTTTATGAAAACTGTCCT-------------CTGTTAC-----CATC-TGTATCCTCCACCACTCGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 200666 137 - 81552678 TCTACACCCGCTTTAAAGACAAGCCCATGTCCTCCTGTTTCTCTCTTGCAGAGTGGGGATCTCAATACGG----GCCT---GGCATGTGAGAAAGGTTTATGAAAACTGTCTT-------------CTGTTAC-----GGTCTTGTATCCTCCACCACTCGG i nomLeu3.chr19 C 0 M 3053 s rheMac3.chr16 110661 136 + 80904711 TCTACACTTGCTTTGAAGACAAGTCCACGTCCTCCTGTTTCTCTCTTGCAGAGCAGGGACCTCCGTACGG----GCCC---GGCATGTGAGAAATGTTTATGAAAACTGACCA-------------CTGTTGC-----CGTC-TGTCTCCTCCACAACGCGG i rheMac3.chr16 C 0 I 1 s macFas5.chr16 116626 136 + 80997621 TCTACGCTTGCTTTGAAGACAAGTCCACGTCCTCCTGTTTCTCTCTTGCAGAGCAGGGACCTCCGTACGG----GCCC---GGCATGTGAGAAATGTTTATGAAAACTGACCA-------------CTGTTGC-----CGTC-TGTCTCCTCCACAACGCGG i macFas5.chr16 C 0 I 1 s papAnu2.chr16 115133 136 + 74645514 TCTACGCCTGCTTTAAAGACAAGTCCACGTCCTCCTGCTTCTCTCTTGCAGAGCAGGGACCTCCATACGG----GCCC---GGCATGTGAGAAATGTTTGTGAAAACTGACCA-------------CTGTTAC-----CGTC-TGTCTCCTCCACAACGCGG i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 103623 136 + 75148670 TCTACGCCTGCTTTAAAGACAAGTCCACGTCCTCCTGTTTCTCTCTTGCAGAGCAGGGACCTCCGTACGG----GCCC---GGCATGTGAGAAGTGTTTGTGAAAACTGACCA-------------CTATTGC-----TGTC-TGTATCCTCCACAACGCGG i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 920304 136 - 1291538 TTCACACCTACTTTAAAGACAAGCCCACGTCCTCTTGTTTCTCTCTTGCAGAGTGGGGACCTCAATACGG----GCCT---GGCATGTGAGAAATGTTTATGAAAACTGTCTG-------------CCATTAT-----CGTC-CCTATCCTCCACCACTCAG i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75854892 149 + 122082543 TCCACATCTATTTTA---------TCACCTTCTCTTACTTCTCTC-TGCACAGT-GTGATCACAGCAGGGTAGCACCTTAGAGCCTGTAGGGAATG-TTATGAACATCATCCACCCACCCGTCCATCTATCACTCCTGTGTC-TGGCCCATCACCCACCAGA i mm10.chr11 I 180 C 0 e canFam3.chr9 15678979 43 - 61074082 I a score=353570.000000 s hg38.chr17_GL383563v3_alt 199390 142 + 375691 ATCCTAGAGATTGCCTAGTCAGACCTCTGCCCATCCCCAGTCCTTtccggcccctgctggaaaactcctagtgacaggaagcccacaagccaccaggcaCTGCTGA--GTTTCCACTAGATCTGCCAGTGACTGGCACTTCCTT s panTro4.chr17 187783 142 + 82630442 ATCCTAGAGATTGCCTAGTCAGACCCCTGCCCATCCCCAGTCCTTtccggcccctgctagaaaactcctagtgacaggaagcccacaagccaccgggcaCTGCTGA--GTTTCCACTAGATCTGCCAGTAACTGGCACTTCCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 76891 142 + 73212453 ATCCTAGAGATTGCCTAGTCAGATTCCTGCCCATCCCCAGTCCTTtccggcccctgctggaaaactcctattgacaggaagcccacaagccaccaggcaCTGCTGA--ATTTCCACTAGATCTGCCAGTGACTGGCACTTCCTT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 110798 142 + 80904711 ATCCTAGAGATTGCCTAGTCAGACCCCTGCCCATCCCCAGGCCTGTCCGGCTCCTGCTGGAAAACTCCTAGTGACAGGAAGCCCACAAGCCACCAGGCACTGCTGA--GTTTCCACTAGATCTGCCAGTGACTGGCACTTCCTT i rheMac3.chr16 I 1 C 0 s macFas5.chr16 116763 142 + 80997621 ATCCTAGAGATTGCCTAGTCAGACCCCTGCCCATCCCCAGGCCTGTCCGGCTCCTGCTGGAAAACTCCTAGTGACAGGAAGCCCACAAGCCACCAGGCACTGCTGA--GTTTCCACTAGATCTGCCAGTGACTGGCACTTCCTT i macFas5.chr16 I 1 C 0 s papAnu2.chr16 115270 142 + 74645514 ATCCCAGAGATTGCCTAGTCAGACCCCTGCCCATCCCCAGGCCTGTCCGGCTCCTGCTGGAAAACTCCTAGTGACAGGAAGCCCACAAGCCACCAGGCACTGCTGA--GTTTCCACTAGATCTGCCAGTGACTGGCACTTCCTT i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 103760 142 + 75148670 ATCCTAGAGATTGCCTAGTCAGACCCCTGCCCATCCCCAGGCCTGTCCGGCTCCTGCTGGAAAACTCCTAGTGACAGGAAGCCCACAAGCCACCAGGCACTGCTGA--GTTTCCACTAGATCTGCCAGTGACTGGCACTTCCTT i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 920441 142 - 1291538 ATCCCAGAGATTGCCTAGTCAGACCCCTGCCCATCCCTAGTCCTTCccagactctactggaaaacatctagtgatgggaagcccacAGGCCACCAGGCACTGCCGA--GTTTCCACTGGATCTGCCAGGGACCAGCACTTCCTG i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75855041 109 + 122082543 ATCCAAGAGTCTGCCTAGCTA-CCTCCTGCCCAGCCTGACCCTTTCCCACCTCC-------------------------AGCACACAGATGCTCAG---CAGCTGACCATTCCCATTC-ACCTG-----GGCTGGGATCCCTTT i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=6300.000000 s hg38.chr17_GL383563v3_alt 199532 3 + 375691 CCC s panTro4.chr17 187925 3 + 82630442 CCC i panTro4.chr17 C 0 I 237 s ponAbe2.chr17 77033 3 + 73212453 CCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 110940 3 + 80904711 CCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116905 3 + 80997621 CCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 103902 3 + 75148670 CCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920583 3 - 1291538 CCC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75855150 0 + 122082543 C e canFam3.chr9 15678979 43 - 61074082 I e papAnu2.chr16 115412 0 + 74645514 C e nomLeu3.chr19 200803 3053 - 81552678 M a score=113829.000000 s hg38.chr17_GL383563v3_alt 199535 59 + 375691 GCCAGCTGACCTCCCAGGCACCTTCTCTCGCTGGCCCAAGGCAGAGGGCTGCACGGGAC s panTro4.chr17 188165 59 + 82630442 GCCAGCTGACCTCCCAGGCACCTTCTCTCGCTGGCCCAAGGCAGAGGGCTGCACGGGAC i panTro4.chr17 I 237 C 0 s ponAbe2.chr17 77036 59 + 73212453 GCCAGCTGACCTCCCGGGCACCTTCTCTCGCTGGCCCATGGCAGACGGCTGCACGGGAC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 110943 59 + 80904711 GCCAGCTGACCTCCCGGGCACCTTCTCTTGCTGGCCCGAGGCACAGGGCTGCACGGGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116908 59 + 80997621 GCCAGCTGACCTCCCGGGCACCTTCTCTTGCTGGCCCGAGGCACAGGGCTGCACGGGAC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 103905 59 + 75148670 GCCAGCCGACCTCCTGGGCACCTTCTCTTGCTGGCCCGAGGCACAGGGCTGCACAGGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920586 58 - 1291538 ACCAGCTGACCTCCCTGGCACCTTCTCTCACTGG-CCAAGGCAGAGGGCTGCACGGGAC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855150 55 + 122082543 GCCAGCTG-CCTCACCTGCATCTTCTCTGTCTA--TGGAGGCTGA-GGCTGAACAGGAC i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e papAnu2.chr16 115412 0 + 74645514 C e nomLeu3.chr19 200803 3053 - 81552678 M a score=51173.000000 s hg38.chr17_GL383563v3_alt 199594 40 + 375691 AGACTCTCCCAGCCACAAGTACCTGCAGGCACCTCACCCA s panTro4.chr17 188224 40 + 82630442 AGACTCTCCCAGCCACAAGTACCTGCAGGCACCTCACCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77095 40 + 73212453 GGACCCTCCCAGCCACAAGTACCTGCAGGTACCTCACCCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111002 39 + 80904711 GGACCCTCCCAGCCGCAAGGTCCTGCAGACACCTC-CCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116967 39 + 80997621 GGACCCTCCCAGCCGCGAGGTCCTGCAGACACCTC-CCCA i macFas5.chr16 C 0 T 106 s calJac3.chrUn_GL286409 920644 39 - 1291538 GGACCCTCCCAACCACGAGTACCTGCAGACACCTC-CCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855205 40 + 122082543 AGACCTATCCAGTCTCAAGCAGCTGTGAGCAGCTCATCCA i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e chlSab2.chr16 103964 0 + 75148670 C e papAnu2.chr16 115412 0 + 74645514 C e nomLeu3.chr19 200803 3053 - 81552678 M a score=5602.000000 s hg38.chr17_GL383563v3_alt 199634 12 + 375691 GCCCCCAAGCTC s panTro4.chr17 188264 12 + 82630442 GCCCCCAAGCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77135 12 + 73212453 GCCCCCAAGCTC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111041 11 + 80904711 GCCCTC-AGCTC i rheMac3.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920683 12 - 1291538 GCCCCCAAGCTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855245 1 + 122082543 --------G--- i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e chlSab2.chr16 103964 0 + 75148670 C e papAnu2.chr16 115412 0 + 74645514 C e macFas5.chr16 117006 106 + 80997621 T e nomLeu3.chr19 200803 3053 - 81552678 M a score=5842.000000 s hg38.chr17_GL383563v3_alt 199646 5 + 375691 TCCTC s panTro4.chr17 188276 5 + 82630442 TCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77147 5 + 73212453 TCCTC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111052 5 + 80904711 TCCTC i rheMac3.chr16 C 0 T 117 s macFas5.chr16 116900 5 + 80997621 TCCTT i macFas5.chr16 T 106 C 0 s calJac3.chrUn_GL286409 920695 5 - 1291538 TCCTC i calJac3.chrUn_GL286409 C 0 T 117 s mm10.chr11 75855246 2 + 122082543 ---TG i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e chlSab2.chr16 103964 0 + 75148670 C e papAnu2.chr16 115412 0 + 74645514 C e nomLeu3.chr19 200803 3053 - 81552678 M a score=70597.000000 s hg38.chr17_GL383563v3_alt 199651 39 + 375691 CCTGCCAGCTGACCTCCCGGGCACCTTCTCTTGCTGGCC s panTro4.chr17 188281 39 + 82630442 CCTGCCAGCTGACCTCCCGGGCACCTTCTCTTGCTGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77152 39 + 73212453 CCTGCCAGCTGACCTCCTGGGCACCTTCTCTCGCTGGCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 110940 39 + 80904711 CCCGCCAGCTGACCTCCCGGGCACCTTCTCTTGCTGGCC i rheMac3.chr16 T 117 C 0 s macFas5.chr16 116905 39 + 80997621 CCCGCCAGCTGACCTCCCGGGCACCTTCTCTTGCTGGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115412 39 + 74645514 CCTGCCAGCTGACCTCCCGGGCACCTTCTCTTGCTGGCC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920583 39 - 1291538 CCCACCAGCTGACCTCCCTGGCACCTTCTCTCACTGGCC i calJac3.chrUn_GL286409 T 117 C 0 s mm10.chr11 75855248 14 + 122082543 CCTGCCAG------TCCTGG------------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e chlSab2.chr16 103964 0 + 75148670 C e nomLeu3.chr19 200803 3053 - 81552678 M a score=1500.000000 s hg38.chr17_GL383563v3_alt 199690 1 + 375691 C s panTro4.chr17 188320 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77191 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 110979 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116944 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115451 1 + 74645514 C i papAnu2.chr16 C 0 C 0 e mm10.chr11 75855262 0 + 122082543 C e canFam3.chr9 15678979 43 - 61074082 I e calJac3.chrUn_GL286409 920622 0 - 1291538 C e chlSab2.chr16 103964 0 + 75148670 C e nomLeu3.chr19 200803 3053 - 81552678 M a score=36250.000000 s hg38.chr17_GL383563v3_alt 199691 22 + 375691 AAGGCAGAGAGCTGCATGGGAT s panTro4.chr17 188321 22 + 82630442 AAAGCAGAGAGCTGCACGGGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77192 22 + 73212453 AAGGCAGAGGGCTGCACGGGAC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 110980 22 + 80904711 GAGGCACAGGGCTGCACGGGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 116945 22 + 80997621 GAGGCACAGGGCTGCACGGGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115452 22 + 74645514 GAGGCACAGGGCTGCACGGGAT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920622 22 - 1291538 AAGGCAGAGGGCTGCACGGGAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75855262 0 + 122082543 C e canFam3.chr9 15678979 43 - 61074082 I e chlSab2.chr16 103964 0 + 75148670 C e nomLeu3.chr19 200803 3053 - 81552678 M a score=81063.000000 s hg38.chr17_GL383563v3_alt 199713 36 + 375691 GGACTCTCCCAGCCACGTGTACCTGCAGACACCTCC s panTro4.chr17 188343 36 + 82630442 GGACTCTCCCAGCCACGTGTACCTGCAGACACCTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77214 36 + 73212453 AGACTCTCCCAGCCACGAGTACCTGCAGGCACCTCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111002 36 + 80904711 GGACCCTCCCAGCCGCAAGGTCCTGCAGACACCTCC i rheMac3.chr16 C 0 I 20 s macFas5.chr16 116967 36 + 80997621 GGACCCTCCCAGCCGCGAGGTCCTGCAGACACCTCC i macFas5.chr16 C 0 I 3 s papAnu2.chr16 115474 36 + 74645514 GGACCCTCCCAGCCGCGAGGTCCTGCAGacacctcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 103964 36 + 75148670 GGACCCTCCCAGCCGCGAGGTCCTGCAGACACCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920644 36 - 1291538 GGACCCTCCCAACCACGAGTACCTGCAGACACCTCC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75855262 0 + 122082543 C e canFam3.chr9 15678979 43 - 61074082 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=2034.000000 s hg38.chr17_GL383563v3_alt 199749 4 + 375691 TCCT s panTro4.chr17 188379 4 + 82630442 CCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77250 3 + 73212453 -CCG i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 115510 3 + 74645514 -cca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104000 3 + 75148670 -CCA i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 920680 3 - 1291538 -CCA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75855262 0 + 122082543 C e canFam3.chr9 15678979 43 - 61074082 I e rheMac3.chr16 111038 20 + 80904711 I e macFas5.chr16 117003 3 + 80997621 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=10602.000000 s hg38.chr17_GL383563v3_alt 199753 7 + 375691 GCCCCCA s panTro4.chr17 188383 7 + 82630442 GCCCCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77253 7 + 73212453 GGCCCCA i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 117006 7 + 80997621 GCCCTCA i macFas5.chr16 I 3 C 0 s papAnu2.chr16 115513 7 + 74645514 gccccca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104004 6 + 75148670 -CCCCCA i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 920683 7 - 1291538 GCCCCCA i calJac3.chrUn_GL286409 C 0 I 10 s mm10.chr11 75855262 1 + 122082543 ------A i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e rheMac3.chr16 111038 20 + 80904711 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=13905.000000 s hg38.chr17_GL383563v3_alt 199760 9 + 375691 GCTCTCCTT s panTro4.chr17 188390 9 + 82630442 GCTCTCCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77260 9 + 73212453 GCTCTCCTT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 117013 9 + 80997621 GCTCTCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115520 9 + 74645514 gctctcCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104010 9 + 75148670 GCTCTCCTC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75855263 9 + 122082543 GCTTCCCAT i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e calJac3.chrUn_GL286409 920690 10 - 1291538 I e rheMac3.chr16 111038 20 + 80904711 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=-3229.000000 s hg38.chr17_GL383563v3_alt 199769 2 + 375691 GG- s panTro4.chr17 188399 2 + 82630442 GG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77269 2 + 73212453 GG- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 117022 1 + 80997621 A-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115529 2 + 74645514 GG- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104019 2 + 75148670 AG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920700 2 - 1291538 AG- i calJac3.chrUn_GL286409 I 10 C 0 s mm10.chr11 75855272 2 + 122082543 -GA i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e rheMac3.chr16 111038 20 + 80904711 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=129102.000000 s hg38.chr17_GL383563v3_alt 199771 51 + 375691 TGCCATGCCCAGATCCCCAGCTTCTCAAGGACAACACCC-TGATTCCTCAGC s panTro4.chr17 188401 51 + 82630442 TGCCATGCCCAGATCCCCAGCTTCTCAAGGACAACACCC-TGATTCCTCAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77271 51 + 73212453 TGCCATGCCCAGATCCCCAGCTTCTCAAGGACAACACCC-TGGTTCCTCAGC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111058 52 + 80904711 TGCCACGCCCAGACCCCCAGCTTCTCAAGGACAACACCCGCGGTTCCTCAGC i rheMac3.chr16 I 20 C 0 s macFas5.chr16 117023 52 + 80997621 TGCCACACCCAGACCCCCAGCTTCTCAAGGACAACACCCGCGGTTCCTCAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115531 52 + 74645514 TGCCACGCCCAGACCCCCAGCTTCTCAAGGACAACATGCACGGTTCCTCAGC i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 104021 52 + 75148670 TGCCACGCCCAGACCCCCAGCTTCTCAAGGACAACACCCGCGGTTCCTCAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920702 52 - 1291538 TGCCACACCCAGACCCGAAGCTTCTCAAGGACAACACCCCTGGTCCCTCAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855274 50 + 122082543 TCCCATGTCCAGGTCC-CAGTTTCTCAAGGAGAATGTTCCTGGTCCCTCAC- i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=2548.000000 s hg38.chr17_GL383563v3_alt 199822 1 + 375691 T s panTro4.chr17 188452 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77322 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111110 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s macFas5.chr16 117075 1 + 80997621 T i macFas5.chr16 C 0 C 0 s chlSab2.chr16 104073 1 + 75148670 T i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920754 1 - 1291538 T i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855324 1 + 122082543 T i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e papAnu2.chr16 115583 1 + 74645514 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=123105.000000 s hg38.chr17_GL383563v3_alt 199823 54 + 375691 GTCCCAAGTCCCCTCTCATCGAGCCACCCCCTCTTGCC-ATGTTTGTCACTGCCC s panTro4.chr17 188453 54 + 82630442 GTCCCAAGTCCCCTCTCATCGAACCACCCCCTCTCGCC-ATGTTTGTCACTGCCC i panTro4.chr17 C 0 M 1272 s ponAbe2.chr17 77323 54 + 73212453 GTCCCAAGTCCCCTCTCATCGAGCCACCCCTTCTCACC-ATgtttgtcactgccc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111111 54 + 80904711 GTCCCAAGTCCCCTCTCGTCGAGTCACCCCCTCTCGCC-GTGTTTGTCACCGTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 117076 54 + 80997621 GTCCCAAGTCCCCTCTCGTCGAGTCACCCCCTCTCGCC-GTGTTTGTCACCGTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115584 54 + 74645514 GTCCCAAGTCCCCTCTCGTCGAGTCACCCCCTCTCGCT-GTGTTTGTCACCGTCT i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 104074 54 + 75148670 GTCCCAAGTCCCCTCTCGTCGAGTCACCCCCTCTCGCC-ATGTTTGTCACCGTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920755 55 - 1291538 ATTCCAAGCTCCCTCTCATCGAGCCACCCCCTCTCGCCAATgtttgtcactaccc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855325 38 + 122082543 ATTTTAAGCC-----------AGCGTCCCTCTGGCTCC------TATCACTGTCC i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e nomLeu3.chr19 200803 3053 - 81552678 M a score=201418.000000 s hg38.chr17_GL383563v3_alt 199877 97 + 375691 CTCGGGAGAGGGGCTCAGAAGTGGCCACAAAGCTCCAGACTTGTTCTGGCTGCCCCCATGGCACAGCCACTGGCTTTCCACCCTCTTTCCTGCCTCA s ponAbe2.chr17 77377 97 + 73212453 ctcgggagaggggctcagaagtggccacagagctccagacttgttctggctgcccccagggcacagcCACTGGCTTTCCACGCTCTTTCCTGCCTCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111165 97 + 80904711 CTTGGGAGAGGGGCTCAGAAGTGGCCACAAAGCTCCAGGCTTGTTCGGGCTGCCCCCAGGGCACAGCCACTGACTTTCCACCCTCTTTCCTGCCTCA i rheMac3.chr16 C 0 M 67 s macFas5.chr16 117130 97 + 80997621 CTTGGGAGAGGGGCTCAGAAGTGGTCACAAAGCTCCAGGCTTGTTCGGGCTGCCCCCAGGGCACAGCCACTGACTTTCCACCCTCTTTCCTGCCTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115638 97 + 74645514 CTTGGGAGAGGGGCTCAGAAGTGGCCACAAAGCTCTAGGCTTGTTCTGGCTGCCCCCAGGGCACAGCCACTGACTTTCCACCCTCTTTCCTGCCTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104128 97 + 75148670 CTTGGGAGAGGGGCTCAGAAGTGGCCACAAAGCTCCAGGCTTGTTCGGGCTGCCCCCAGGGCACAGCCACCGACTTTCCACCCTCTTTCCTGCCTCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920810 96 - 1291538 ctcaggagaggggctcagaagtggccacaaagctccagacttgttctggctgcccccagggcacagcCACCAGCTTTCCAC-CTCTCTCCTGCCTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855363 94 + 122082543 CTCAGCAGAGAGGCCCAGTAAT-ACTACAGTGTCTCAGGCTTGGTGTGGTTGCCTCCAGAGTACAACCAGTGTCTCTT--CCTTCTTCTCTGCCTCA i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e nomLeu3.chr19 200803 3053 - 81552678 M e panTro4.chr17 188507 1272 + 82630442 M a score=177442.000000 s hg38.chr17_GL383563v3_alt 199974 143 + 375691 GTTCTATCCTCCTTGCATCCTGAGCCTCCCAGGAGCCCCTCTTGACCCTATGTAGTCCCCCAGGGACTCTGAGAGCCAG-------GTGGGTCAGAGGGGGCCTGCCAGGGCCCAAGCAGGTGTAAAGCATCCCTTT--ATCACTGCCCTGG-- s ponAbe2.chr17 77474 143 + 73212453 GTTCTGTCCTCCTTGGGTCCTGAGCCTCCCACGAGCCCCTCTTGACCTCATGTAGTCCCCCAGGGACTCTGAGAGCCAG-------GTGGGTCAGAGGGTGCCTGCCAGGGCCCAAGCAGGTGCAAAGCATCCCTTT--ATCACTGCCCTGG-- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 117227 142 + 80997621 GTTCCGTCCTCCTTGGGTCCTGAGCCTCCCAGGAGCCCCTCTTGACCGCATGTGGTCCCCCAGGAACTCCGAGAGCCAG-------ATGGGTCAGAGGGTGCCCGCCAGGGCCCAAGCAGGTGCAAAGCATCCCTTT--ATCACTGCCCTG--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115735 142 + 74645514 GTTCTGTCCTCCTTGGGTCCTGAGCCTCCCAGGAGCCCCTCTTGACCCCATGTGG-CCCCCAGGAACTCTGAGAGCCAG-------ATGGGTCAGAGGGTGCCCGCCAGGGCCCAAGCAGGTGCAGAGCATCCCTTT--ATCACCGCCCTGG-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104225 143 + 75148670 GTTCTGTCCCCCTTGGGTCCTGAGCCTCCCAGGAGCCCCTCTTGACCCCATGTGGTCCCCCAGGAACTCTGAGAGCCAG-------ATGGATCAGAGGGTGCCCGCCAGGGCCCAAGTAGGTGCAGAGCATCCCTTT--ATCACTGCCCTGG-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 920906 143 - 1291538 GTTCTGTCTTCCTCAGGCCCTGAGCCTCCCAGGAGCTCCTCTTGACTCCACGTAGTCCCACAGGGCCTCTGAGAGCCAG-------GTGGGTCCAAGGGTGCCTGCCAGGACCCATGCAGATGCAAAGCGTCCCTTT--ATCACTGACCTGG-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855457 142 + 122082543 GTTTTGTGCTTTTGAGGCCCTGGTCTTCCCACGAGACCCCTCTG-TTCCACACAG-CCGTCATGGCCTCTCAGAGCTGGTGCAGGAGAGGGGCAGATGACACTGGCTGGGTCCTATCT----------CTTCCCCTTGAAGATTTGATATAGGA i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e rheMac3.chr16 111262 67 + 80904711 M e nomLeu3.chr19 200803 3053 - 81552678 M e panTro4.chr17 188507 1272 + 82630442 M a score=458432.000000 s hg38.chr17_GL383563v3_alt 200117 295 + 375691 GGAAGTGGT--GA-GAG-TCACCCTAAAGCTGGCC-AGACAGACACCCCCAAAGGC-TGGCAGAGCCCCAGGAATCCAGGGATGCCCACCCTGAACTC-ACAGGGTGGGAGGTGCTCTGGGTCTGGGACGCACAGCCCCTTGGGCTCTGAGGGGTCCCCCTGTTCCTCTAATATCCCCAGCTTGGACACCCAGGCTCCCCACTCCTGCTGTCC-ctggaag-------------------------------------------caaggctgaatcaatggcagcttccacat--gctcgctgtgtggctttgagtgagttacttaa-cctctctgagcctgagtttct s ponAbe2.chr17 77617 290 + 73212453 GGAAGTGGT--GA-GAG-TCACCCTAAAGCTGGCC-AGACAGACACCCCCAAAGGC-TGGCAGAGCCCCAGGAATCCGGGGATGCCCACCCTGAATTC-ACAGGGTGGGAGGTGTTCTGGGTCTGGGACGCACAGCCCCTTGGGCTCTGAGGGGTCCCTCTGTTCCTGTAATACCCCCAGCATGGAAACCCAGGCTCCCCACTCCTGCTGTCA-CTGGAA------------------------------------------------GCTGAATCAATGGCAGcttccacac--actcactgtatggctttgagtgagttacttaa-cctctctgagcctgagtttct i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 111329 289 + 80904711 GGAAGTGGT--GAGGAG-TCACCCTAAACCTGGC-----CAGACATCCCCAAAGGC-GGGCAGAGCCCCAGGAATCCAGGGATGCCCACCCTGAACTC-AAAGGGCGGGAGGTGCTCT-GGTCTGGGACACACAACCCCTTGGGCTCTGAGGGGTCCCTCTGTTCCTCCACCACCCCCGGCTTGGACACCCAGGCTCCCCACTCCTGCTGTCC-ctggaag-------------------------------------------caaggctggatcaatggcagcttccaca----ctcgctgtgtggctttgagagagttacttaa-cctctctgagcctaagtttcc i rheMac3.chr16 M 67 C 0 s macFas5.chr16 117369 289 + 80997621 GGAAGTGGT--GAGGAG-TCACCCTAAACCTGGC-----CAGACATCCCCAAAGGC-GGGCAGAGCCCCAGGAATCCAGGGATGCCCACCCTGAACTC-AAAGGGCGGGAGGTGCTCT-GGTCTGGGACGCACAACCCCTTGGGCTCTGAGGGGTCCCTCTGTTCCTCCACCACCCCCGGCTTGGACACCCAGGCTCCCCACTCCTGCTGTcc-ctggaag-------------------------------------------caaggctggatcaatggcagcttccaca----ctcgctgtgtggctttgagagagttacttaa-cctctctgagcctaagtttcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 115877 291 + 74645514 GGAAGTGGTGAGAGGAG-TCACCCTAAACCTGGC-----CAGACATCCCCAAAGGC-GGGCAGAGCCCCAGGAATCCAGGGATGCCCACCCTGAACTC-AAAGGGCGGGAGGTGCTCT-GGTCTGGGATGCACAACCCCTTGGGCTCTGAGGGGTCCCTCTGTtcctccaccacccccggctcgGACACCTAGGCTCCCCACTCCTGCTGTCC-CTGGAAG-------------------------------------------CAAGGCTGGATCAATGGCAGCTTCCACA----CTCGCTGTGTGGCTTTGAgagagttacttaa-cctctctgagcctaagTTTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104368 290 + 75148670 GGAAGTGGT--GAGGAG-TCACCCTAAACCTGGC-----CAGACATCCCCAAAGGC-GGGCAGAGCCCCAGGAATCCAAGGTTGCCCACCCTGAACTCAAAAGAGTGGGAGGTGCTCT-GGTCTGGGACGCACAAGCCCTTGGGCTCTGAGGGGTCCTTCTGTTCCTCCACCACCCCCGGCTCAGACACCCAGGCTCCCCACTCCTGCTGTCC-ctggaag-------------------------------------------caaggctggatcaatggcagcttccaca----ctcgctgtgtggctttgagagagttacttta-cctctctgagcctaagtttcc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 921049 274 - 1291538 GAAAGA-----GAGGAG-TCACCCTAAAGCTGGCA-AGACAGACACCCCCGAAGGC-TGGCAGAGCCCCAGGAAGCTGGGGATGCTGACCCTGAATTC-------------------TGGGTCTCGGATGCACAGCCCCTTGGGCTCTGACGGGTCCTTCTCTTTCTCTGTCACCCCCAGCTTGGACATACAGGCTCCCTACTCCTATTGTCC-CTGGAAG-------------------------------------------CAAGGttgaatcaatggcagctgccacat--actggctgtgtggctttcagtgagttgctt-a-cctctctgagcctgagtttct i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855599 312 + 122082543 ---AGATGT--GACAAGATCACCCCAGGGTTGGTTGAGAAGGGTACCCCAGAAAGCTGGGTAGATCCCTAGAAGTTAAGGG-----TACCCTTG--TC--CAGGATAGGAATGAC----AGCCAGG-------AACCCTCTGG--------GAATCCCTCTGCACC-CTGTCATTTCCAGGATGTCCACCCTGGCTCTCTTTTCTTGCTCCCCATTGGAAGAATCAAGGGCAGAAGAATCAAATGAACCAAGTTGTTGTTTGATCAAGGCAGAACCAACTGCGGCTTCCATGTGCACTGGCTGTGGAGCGCTGGGTGA---ACATAAGCCTCTCTGAGCTTTGCTTGTT i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e nomLeu3.chr19 200803 3053 - 81552678 M e panTro4.chr17 188507 1272 + 82630442 M a score=23249.000000 s hg38.chr17_GL383563v3_alt 200412 10 + 375691 ttattgatta s ponAbe2.chr17 77907 10 + 73212453 ttattgatta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 203857 10 - 81552678 TTATTGATTA i nomLeu3.chr19 M 3053 C 0 s rheMac3.chr16 111618 10 + 80904711 ttattgatta i rheMac3.chr16 C 0 C 0 s macFas5.chr16 117658 10 + 80997621 ttattgatta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 116168 10 + 74645514 TTATTGATTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104658 10 + 75148670 ttattgatta i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 921323 10 - 1291538 tcatTAACTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855911 8 + 122082543 TCATTGGT-- i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I e panTro4.chr17 188507 1272 + 82630442 M a score=210547.000000 s hg38.chr17_GL383563v3_alt 200422 71 + 375691 aattgatgaaacatgatagctgcTGAGAAAGTTGGAAGTACTCAACAGAGCAAAGGGCACCCAGAAGGTGT s panTro4.chr17 189779 70 + 82630442 AATTGATGAAACGTGATAGCTGCTGAGAAAGT-GGAAGTACTCAACAGAGCAAAGGGCACCCAGAAGGTGT i panTro4.chr17 M 1272 C 0 s ponAbe2.chr17 77917 71 + 73212453 aattgatgaaatgtgatagctgcTGAGAAAGTTGGAAGTGCTCAACAGAGCAAAGGGCACCCAGAAGGTGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 203867 71 - 81552678 AACTGATGAAATGTGATAGCTGCTGAGAAAGCTGGAAGTGCTCAACAGAGCAAAGGGCACCCAGAAGGTGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 111628 71 + 80904711 aattgattaaatgtgatagcttctgagAAAGTTGGAAGTGCTCAGCAGAGCAAACGGCACCCAGAAGGTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 117668 71 + 80997621 aattgattaaatgtgatagcttctgagAAAGTTGGAAGTGCTCAGCAGAGCAAACGGCACCCAGAAGGTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 116178 71 + 74645514 AATTGATTAAATGTGATAGCTTCTGAGAAAGTTGGAAGTGCTCAGCAGAGCACACGGCACCCAGAAGGTGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104668 71 + 75148670 aattgattaaatgtgatagcttctgagAAAGTTGGAAGTGCTCAGCAGAGCACACGGCACCCAGAAGGTGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 921333 71 - 1291538 CATTGATTAAATATGATAGCTGCTAAGAAAGTTGAAAGTGCTCATCAGAGCAAATGGCACCCAGAAGGTGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855919 62 + 122082543 ------TGAAACAAAATCATTTCTGTG--GGCTGGGAGTGCCCAGTGCCGGGTCTAGCATGCAGGAGGGG- i mm10.chr11 C 0 C 0 e canFam3.chr9 15678979 43 - 61074082 I a score=1700555.000000 s hg38.chr17_GL383563v3_alt 200493 534 + 375691 TCACAAGATGCCACCTGCCTGCCTCCTTCCTGTC------CCTTCCGCTCGAGGCTCCAGGGCGAAGCAACCGAGGCT-GAGGGAGAGCC-AGGCTGGACCACATCACAG-CCTTGGAAGCTCTTCTCTGAGGACTTCTCA--GATGGGACAGCCTCT--------------CCAACAGGAACAGAAAGGACCG------------CctcttggagagagccactgattagaattcagagcagctgctgagttaaggtccctaaatttgtaatgcctccttcagaaaacACCACATACTGTATAGCCTCTTTTCTGATGAAGGAAATAAATTCAGGGTATTTAGTCA---------GGAGGGGTGGGAGCCTGTAAACGAACACTTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGAAGGGCAGGCC----AAGGTT---CCGAGCCGACGTcctgaatctgaatcctgggtctggcacccagcatctggtgtgatttggacacgctgacctccctggccctcagtttcttcatcagtaggc-aaacacaggagcagggcttatctcaccgggaggacttgag s panTro4.chr17 189849 534 + 82630442 TCACAAGATGCCACCTGCCTGCCTCCTTCCTGTC------CCTTCCGCTCGAGGCTCCAGGGCGGAGCAACAGAGGCT-GAGGGAGAGCC-GGGCTGGACCACATCACAG-CCTTGGAAGCTCTTCTCTGAGGACTTCTCA--GATGGGACAGCCTCT--------------CCAACAGGAACAGAAAGGACCG------------TCTCTTGGAGAGAGCCACCGATTAGAATTCAGAGCAGCCGCTGAGTTAAGGTCCCTAAATTTGTAATGCCTCCTTCAGAAAACACCACATACTGTATAGCCTCTTTTCTGATGAAAGAAATAAATTCGGGGTATTCAGTCA---------GGAGGGGTGGGAGCCTGTAAACGAACACTTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGAAGGGCAGGCC----AAGGTT---CCGAGCCGACGTcctgaatctgaatcctgggtctggcacccagcatctggtgtgatttggacacgctgacctccctggccctcagtttcttcatcagtaggc-aaacacaggagcagggcttatctcaccgggaggacttgag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 77988 533 + 73212453 TCACAAGATGCCACCTGCCTGCCTCCTTCCTGTC------CCTTCCGCTCGAGGCTCCAGGGCAGAGCAACAGAGGCT-GAGGGAGAGCC-GGGCTGGACCACATCACAG-CCTTGGAAGCTCTTCTCTGAGGACTTCTCA--GATGGGACAGCCTCT--------------CCAACAGGAACAGAAAGGACCG------------CCTCTTGCAGAGAGCCACCGATTAGAATTCAGAGCAGCTGCTGAGTTAGAGTCCCTAAATTTTTAATACCTCCTTCAGAAAACACCACATACTGTATAGTCTCTTTTCTGATGAAGGAAATAAATTCAGGGTATTTAGTCA---------GGAGGGGTGGGAGCCTGTAAACAAACACCTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGACGGGCAGGCc----aagctt---ccgagccgacgtcctgaatctgaatcctgggtctggcacccagcacct-gtgtgatttggacacaatgacctccctggccctcagtttcctcatcagtaggc-aaacacaggagcagggcttatctcaccgggaggacttgag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 203938 525 - 81552678 TCACAAGATGCCACCTGCCTGCCTCCTTGCTGTC------CCTTCCGCTCGAGGCTCCAGGGCAGAGCAGCAGAGGCT-GAGGGAGCGCC-GGGCCGGACCATATCACAG-CCTTGGAAGCTCTTCTCTGAGGACTTCTCA--GATGGGACGGCCTTT--------------CCAACAGGAACAGAAAGGACCG------------CCTCTTGGAGACGGCCACCAATTAGAATTCAGAGCAGCTGCTGAGTCAGGGTCCCTAAATCTTTAATACCTCCTTCAGAAAACACCACATACTGTATAGTCTCTTTTCTGATGAAGGAAATAAATTCAGGGTATTTAGTCA---------GGAGGGGTGGGAGCCTGTAAACGAACACTTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGAAGGGCAGGCC----AAGGTT---CCGAGCCAACGTcctgaacctgaatcctgggtctggcacccagcacct-gtgtgatttggacacactgacctccct--------gtttcctcatcactaggc-aaacacaggagcagggcttatctcactgggaggacttgag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 111699 534 + 80904711 TCACAAGATGCCACCTGCCTGCCTCCTTCCTGTC------CCTTCTGCTCAGGGCTCCAGGGGGGACCAACAGAGGCTGGAGGGAGAGCC-GGGCTGGGCCACATCACAGCCCTTGGAAGCTCTTCTCTGAGG-CTTCTCA--GATGGGACAGCCTCT--------------CCCACAGGAGCAGAAAGGTCTG------------CGTCTCAGAGGGAGCCACTGATCGGAATTCAGAGCAGCCACTGAGTTAAGGTCCCTAAATTTTTAATGCCTCCTTCAGAAAGCACCACATGCTGTGTAGTCTCTTTTCTGATGAAGGACATAAATTCAGGGTATTTAGTCA---------GGAGGCGTGGGAGCCTGTAAACGAACACTTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGAAGGGCAGGCC----AAGGTT---CCGAGCTGACGTcctgaatttgaatccggggtccagcgcccagcaccg-gtgtgatttggaaacactgacctccctggccctcggtttcttcatcgttaggc-aaacacaggagcaaggcttatctcacagagaggacttgag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 117739 534 + 80997621 TCACAAGATGCCACCTGCCTGCCTCCTTCCTGTC------CCTTCTGCTCAGGGCTCCAGGGGGGACCAACAGAGGCTGGAGGGAGAGCC-GGGCTGGGCCACATCACAGCCCTTGGAAGCTCTTCTCTGAGG-CTTCTCA--CATGGGACAGCCTCT--------------CCCACAGGAGCAGAAAGGTCTG------------CATCTCAGAGGGAGCCACTGATTGGAATTCAGAGCAGCCACTGAGTTAAGGTCCCTAAATTTTTAATGCCTCCTTCAGAAAGCACCACATGCTGTGTAGTCTCTTTTCTGATGAAGGACATAAATTCAGGGTATTTAGTCA---------GGAGGCGTGGGAGCCTGTAAACGAACACTTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGAAGGGCAGGCC----AAGGTT---CCGAGCTGACGTcctgaatttgaatccggggtccggcgcccagcaccg-gtgtgatttggaaacactgacctccctggccctcggtttcttcatcgttaggc-aaacacaggagcaaggcttatctcacagagaggacttgag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 116249 534 + 74645514 TCACAAGATGCCACCTGCCTGCCTCCTTCCTGTC------CCTTCTGCTCAGGGTTCCAGGGGGGACCAacagaggctggagggagagcC-GGGCTGGGCCACATCACAGCCCTTGGAAGCTCTTCTCTGAGG-CTTCTCA--GATGGGACAGCCTCT--------------CCCACAGGAGCAGAAAGGTCTG------------CGTCTTAGAGGGAGCTACCAATTGGAATTCAGAGCAGCCACTGAGTTAAGGTCCCTAAATTTTTAATGCCTCCTTCAGAAAGCACCACATGCTGTGTAGTCTCTTTTCTGATGAAGGACATAAATTCAGGGTATTTAGTCA---------GGAGACGTGGGAGCCTGTAAACGAACACTTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGAAGGGCAGGCC----AAGGTT---CCGAGCTGACGTCCTGAATTTGAATCCGGGGTCCGGCACCCAGCACCG-GTGTGATTTGGAAACACTGACCTCCCTGGCCCTCGGTTTCTTCATCGTTAGGC-AAACACAGGAGCAAGGCTTATCTCACGGGGAGGACTTGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 104739 543 + 75148670 TCACAAGATGCCACCTGCCCGCCTCCTTCCCGTC------CCTTCTGCTCAGGGCTCCAGGGGGGACCAACAGAGGCTGGAGGGAGAGCC-GGGCTGGGCCACATCACAGCCCTTGGAAGCTCTTCTCTGAGG-CTTCTCA--GATGGGACAGCCTCT--------------CCAACAGGAGCAGAAAGGACTG------------CGTCTTAGAGAGAACCACCGACTGGAATTCAGAGCAGCCACTGAGTTCAGGTCCCTAAATTTTTAATGCCTCCTTCAGAAAGCACCACATGCTGTGTAGTCTCTTTTCTGATGAAGGAAATAAATTCAGGGTATTTAGTCAGGAGGCGTGGGAGGCGTGGGAGCCTGTAAACGAACACTTTGCAA-AAACCTCAACTGACATGACCCTTCTCAGAGAAGGGCAGGCC----AAGGTT---CCgagctgacgtcctgaatttgaatcccgggtccggcacccagcaccg-gtgtgatgtggaaacactgacctctccagccctcggtttcttcatcgttaggc-aaacacaggagcaagactcatctcacggggaggacttgag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 921404 534 - 1291538 TCACAAGATGCCATCTGCCTGCCTCCTTCCTGCCCCTGCTCCTCCCCCTCAAGGCTCCAGGGCAGAGCCACAGAGGCTGGAGGGAGAGCC-AGGCTGGGCCGCATCACAGCAGGTGCCTGCTCTTCTCTGAGGGCTTCTC----ATGAGACAGTCTCT--------------CCAGCAGGAACAGAAAGGACCC------------GCTTCCCAGGAGAGCTGCTGATTAGAATTCAGAGCAACAGCTGAGTTAAGGTCTCTAAATTTTTAATGCCTCCTTCAGAAAACACCACATGCTGTATAATCTCTTTTCTGATGAAGGAAATAAATTCAGGGCATTTAGTCA---------GGAGGGGTGGGAGTGTGTAAAGGAATATTTGGCAAGAAACCTCAACTGACTTCACCCTTTTcagagcagtgcaggcc----aaggtt---ctgagcagatgtcc-gaatttgaatcctgggtccggcacccagtacct-gtgtgacttggacacgccaagctccctggccctcagtttctttgtgggtaggc-aa--acaggatctgcgctcatctcacagggtggactt--- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75855981 459 + 122082543 ----------------------------------------CTTTCCCCTCGAG--CTCTGGGAAGGGTGAGAGGGGCTTAAGGAACTGCT-AGACTAGGCCATATCACAAGATCTAGGAGCTTTCCCTGGAGGGTTTCT-----ATG-----------------------------CAGACGTGGAAAAGACTG------------GAATCTCCA-AGAGCCTCAGATTAGAATTCAGAGCAGTAGCTGAGATAAGGCCCCCAAACCCTTAATGCCTACTTCAGAAACAGCCAAGGGCTGTATAATCTTTTTTCCTAGGAAGGGAATGTGCTCAGGGTATTGAGTAA---------GGAGGTGGGGGA----GTGAGGGAGGGCTGGGGTC-A------------------CCTTCTGAGAGATAATTCAGTCTTGGTAGGTG---CCATACAGACATTCAGAGTC--AATCCTGGGGCCATCACGCTGTGTGTTGTGTGATGTGGACACACAGGTCTCCTGGACCTTCAGTTTCCCCACCACCAGGT-ATGTCTGGGAT--GGTGCTGTTTCACGGAGTGGCCAGGAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15679022 514 - 61074082 TCAGTAGATGCCAATTGCATTCCT-CTTGCCGCC------CCTTCC-CTCAAGGCTCTGGGGCAGAGC-----------------GAGCCAGGGCTGGGTGACAGCACAG-TACTCAAAGCTGT-CCCAGAGAGCTCCCCAGGGATGAGACTATGTCTGGGAAGGCACggggcgggggggggcggggggggcggggggggggCAGACCTCT----GAGAACCCCAGATTAGAATTCAGAGCAGC-ACGGAGATAAGACCCCTGAACTCTTAATGCCTACTTCAAGAAACACCAAGTACTCCATAATCTCTTTTCCACTGAAGTAAATATATTCAGGGTATTTAGTAA---------GA----TCAGAAGAGTGTGAAGGAA-----TGTGG--------------------CCTTCTCAgggaagagcaagcc----ttggtttgctagagcaaacagcctgggtttgagccctggatctgtcacctggcagct-gtgagatttggacacatcagccttctggatccctagtttcatcatcagtaggtggaatgtaggaacagtgcccacctcatagagcagccatgag i canFam3.chr9 I 43 I 983 a score=933052.000000 s hg38.chr17_GL383563v3_alt 201027 332 + 375691 gatcaggcccaagaatgaacgtgaagcctcaagggc-----cagtgcc--aggcacagagcagcctctccacagaggagaggcccatGGGCACCA---CCGCCACCCCCCTCCTGCCACCTGGCAAACACAAACAGCTTTATCACC-------AGTGGGCC-AATTCCCTACTGGAAGAATTCAAAACCAGAAGACCAGAATCCACCTGATTCTG-AGACA-----TTGCTTCCCACCCCGCAAACTTCCtctgcatcacattagtactgtgg-gatactaacaagagtcaagccaaaaaa-aaaaaaaaaa-gg---------------------------tttctaatcacatactctttaaaagcactaggttaaaccaagct s panTro4.chr17 190383 332 + 82630442 gatcaggcccaagaatgaacgtgaagcctcaagggc-----cagtgcc--aggcacggagcagcctctccacagaggagaggcccatGG-CACCA---CCGCCACCCCCCTCCTGCCACCTGGGAAACACAAACAGCTTTATCACC-------AGTGGGCC-AATTCCCTACTGGAAGAATTCAAAACCAGAAGACCAGAATCCACCTGATTCTG-AGACG-----TTGCTTCCCACCCcccaaacttcctctgcatcacattagtactgtgg-gatacgaacaagagccaagccaaaaaa-aaaaaaaaaaagg---------------------------tttctaatcacatacacttgaaaagcactaggttaaaccaagct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 78521 332 + 73212453 gatcaggcccaagaatgaacgtgaagcctcaagggc-----cagtgcc--aggcacggagcagcctctccacagaggagaggcccatGGGCACCA---CCGCCACCCCCCTCCTGCCACCTGGCAAACACAAACAGCTTTATCACC-------GGTGGGCC-AATTCCCTACTAGAAGAATTCAAAACCAGA--ACCAGAATCCACCTGATTCTG-AGACA-----TTGCTTCCCACCCCCCAAACTTCCTCTGCACCACATTAATACTGTGG-GATATTAACAAGAGCCAAGCCAAAAAA-AAAAAAAAAAAGg--------------------------ttttctaatcacatacacttgaaaagcactaggttaaaccaagct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 204463 332 - 81552678 ggtcaggcccaagaatgaacatgaagccaaaagggc-----cagtgcc--aggcacagagcagcctccccacagaggggagGCCCACGGGCACCA---CCGCC-TCCCCCTCCTGCCACCTGGCAAACACAAACAGCTTTATCACC-------AGTGCGCC-AATTCCCTACTGGAAAAATTCAAAACCAGA--ACCAGAATCCACTTGATTCTG-AGACA-----TTGCTTCCCACCCcccaaacttcctctgcatcacattaatactgtgg-gatattaacaagagccaagccaaaaaataataataataaag--------------------------ttttctaatcacatatacttgaaaagcactaggttaaaccaagct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112233 328 + 80904711 gatcaggcccaagaataaccatgaagcctcaagggt-----cagtgcc--aggcacagagcagcctctccacagaggagaggcccatGGGCACCA---CTGCC-ACCCCCTCCTCCCACCTGGCAAACACAAACAGCTTTATCACC-------GGTGGGTC-AATTCCCTACTAGAAGAATTTAAAACCAGAAGACCAGAGTCCACCTGATTCTG-AGACA-----TTGCTTCCCACCCCCCAAACttcctctg---cacattaatactatgg-gatattaacaagagccaggccaaaaaa-aaccaaaaaa--g--------------------------ttttctaaccacatacacttgaaaagtactaggttaaaccaagct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118273 328 + 80997621 gatcaggcccaagaataaccatgaagcctcaagggt-----cagtgcc--aggcacagagcagcctctccacagaggagaggcccatGGGCACCA---CTGCC-ACCCCCTCCTCCCACCTGGCAAACACAAACAGCTTTATCACC-------GGTGGGTC-AATTCCCTACTAGAAGAATTTAAAACCAGAAGACCAGAGTCCACCTGATTCTG-AGACA-----TTGCTTCCCACCCCCCAAACttcctctg---cacattaatactatgg-gatattaacaagagccaggccaaaaaa-aaccaaaaaa--g--------------------------ttttctaatcatatacacttgaaaagtactaggttaaaccaagct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 116783 328 + 74645514 GATCAGGCCCAAGAATGACCGTGAAGCCTCAAGGGT-----CAGTGCC--AGCCACAGAGCAGCCTCTCCACAGAGGAGAGGCCCATGGGCACCA---CTGcc-accccctcctcccacctggcAAACACAAACAGCGTTATCACC-------GGTGGGTC-AATTCCCTACTAGAAGAATTTAAAACCAGAAGACCAGAGTCCACCTGATTCTG-AGACA-----TTGCTTCCCACCCCCCAAACTTCCTGTG---CACGTTAATACTGTGG-GATAGTAACAAGAGCCAggccaaaaaa-aaccaaaaaa--g--------------------------ttttCTAATCACATACACTTGAAAAGTACTAGGTTAAACGAAGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105282 338 + 75148670 gatcaggcccaagaataaccgtgaagcctcaagggt-----cagtgcc--aggcacagagcagcctctccacagaGGAGAAGCCCATGGGCACCACCGCCGCC-GCCCCCTCCTCCCACCTGGCAAACACAAACAGCGTTATCACCCAGAATTGGTGGGCC-AATTCCCCAGTAGAAGAATTTAAAACCAGAAGACCAGAGTCCACCTGATTCTG-AGACA-----TTGCTTCCCACCCCCCAAACCtcctctg---cacgttaatactgtgg-gatattaacaagagccaggccaaaaaa-caacaaaaaa--g--------------------------ttttctaatcacatacacttgaaaagtactaggttaaaccaagct i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 921938 315 - 1291538 ------------gaatgaagctgaagccccagggtc-----cagcgcctgtggcacagagcaacctctccacagaggagaggcccatGGGTACCC---CTGCCACCCTCTTCCTCCCACCTGG--AACACAAATAGCTTTACCACC-------ATTGGACC-AATTCCCTACTTGAAGAATTTAAAATCAGAAAACCGGAATCTGCC-GATTCTG-AGACA-----TTGCTTCCCACtccccaaacatcctctgtaccacataaatactgtgg-gatattaacaagggccaggtcaaaaaa-----aaaaaa--g--------------------------gtttttaatcacatacacttgaaaagcatcaggttaaaccaagtt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75856440 356 + 122082543 GATCAGACCCATGAGTGGACTTAAAACCTCAAAGCCTTGCATTGTACT--AGGTACAAGACGGCC-ATCCACATGTGCCATGGCTGCAATCACTA---CTGTC-----------ACCATGTGACAAGCATAAATAGAGCTATCATC-------TATGGGCCAAATATCCTATTT--ACAATGAAGAACCCAAATCCCAGTGTCGGC-TGACCATGAAGACAGTGTGTGGCTTCTTACTCCCCAAATATCCATGGCACCATATTTACACTGTGGTTATTATAATAAAAGCTGAGGGAGGGGG-GAGGAGGAAA--GGGAGAGAGGCAGAGAGCAAGCACGCCGtcccagatcatgtacatgtgggaagccctaagatgaactaaggt i mm10.chr11 C 0 C 0 e canFam3.chr9 15679536 983 - 61074082 I a score=76156.000000 s hg38.chr17_GL383563v3_alt 201359 30 + 375691 ccatcgctgcgggacgtctcagagccttta s panTro4.chr17 190715 30 + 82630442 ccatcgctgtgggacctctcagagcctttg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 78853 30 + 73212453 ccatcgctgcaggacctctgggagccttta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 204795 30 - 81552678 gcatcgctgcgggacctctgagagccttta i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112561 30 + 80904711 ccattgctgcaggacttctcaaagccttta i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118601 30 + 80997621 ccattgctgcaggacttctcagagccttta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117111 30 + 74645514 CCAttgctgcaggacttctcagagccttta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105620 30 + 75148670 ccattgctgcaggacttctcagagccttta i chlSab2.chr16 C 0 C 0 s mm10.chr11 75856796 28 + 122082543 --gtcatggtaggacttctctgagctttta i mm10.chr11 C 0 I 9 e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C a score=16694.000000 s hg38.chr17_GL383563v3_alt 201389 7 + 375691 ctaagct s panTro4.chr17 190745 7 + 82630442 ctaagct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 78883 7 + 73212453 ctaagct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 204825 7 - 81552678 ctaagct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112591 7 + 80904711 ctaggct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118631 7 + 80997621 ctaggct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117141 7 + 74645514 ctaGGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105650 7 + 75148670 ctaggct i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C a score=5379.000000 s hg38.chr17_GL383563v3_alt 201396 3 + 375691 CCA s panTro4.chr17 190752 3 + 82630442 CCG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204832 3 - 81552678 CCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112598 3 + 80904711 CCA i rheMac3.chr16 C 0 I 37 s macFas5.chr16 118638 3 + 80997621 CCA i macFas5.chr16 C 0 T 48 s papAnu2.chr16 117148 3 + 74645514 CCA i papAnu2.chr16 C 0 T 48 s chlSab2.chr16 105657 3 + 75148670 CCA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=884.000000 s hg38.chr17_GL383563v3_alt 201399 3 + 375691 TCA s panTro4.chr17 190755 3 + 82630442 ACG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204835 3 - 81552678 TCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112638 3 + 80904711 CCG i rheMac3.chr16 I 37 C 0 s chlSab2.chr16 105660 3 + 75148670 TCA i chlSab2.chr16 C 0 T 13 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e papAnu2.chr16 117151 48 + 74645514 T e macFas5.chr16 118641 48 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C a score=6842.000000 s hg38.chr17_GL383563v3_alt 201402 18 + 375691 CTGCGGGACATCTCAGAG s panTro4.chr17 190758 18 + 82630442 CTGCGGGACGTCTCAGAG i panTro4.chr17 C 0 I 6 s nomLeu3.chr19 204838 17 - 81552678 CTGC-AGACCTCTCAGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112641 18 + 80904711 CTGCGGGAACTCTCAGAG i rheMac3.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105663 13 + 75148670 T e papAnu2.chr16 117151 48 + 74645514 T e macFas5.chr16 118641 48 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C a score=-299.000000 s hg38.chr17_GL383563v3_alt 201420 9 + 375691 CCTTTATTT s nomLeu3.chr19 204855 5 - 81552678 CC----TTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112659 8 + 80904711 CCTTTATT- i rheMac3.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105663 13 + 75148670 T e papAnu2.chr16 117151 48 + 74645514 T e macFas5.chr16 118641 48 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 190776 6 + 82630442 I a score=546.000000 s hg38.chr17_GL383563v3_alt 201429 1 + 375691 A s nomLeu3.chr19 204860 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 118593 1 + 80997621 a i macFas5.chr16 T 48 C 0 s papAnu2.chr16 117103 1 + 74645514 A i papAnu2.chr16 T 48 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105663 13 + 75148670 T e rheMac3.chr16 112667 0 + 80904711 C e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 190776 6 + 82630442 I a score=55536.000000 s hg38.chr17_GL383563v3_alt 201430 36 + 375691 CTAAGCTCCATCACTGCGGGACCTCTCGGGGCCTTT s panTro4.chr17 190782 36 + 82630442 CCAAGCTCCGTCGCTGCGGGACCTCTCAGGGCCTTT i panTro4.chr17 I 6 C 0 s nomLeu3.chr19 204861 36 - 81552678 CTAAGCTCCATCACTGCGGGACCTCTGAGAGCCTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112667 34 + 80904711 --AGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118594 36 + 80997621 ccaagctccattgctgcaggacttctcagagccttt i macFas5.chr16 C 0 T 37 s papAnu2.chr16 117104 36 + 74645514 CGAAGCTCCAttgctgcaggacttctcagagccttt i papAnu2.chr16 C 0 T 37 s chlSab2.chr16 105650 36 + 75148670 ctaggctCCATCACTGCAGGAACTCTCAGAGCCTTT i chlSab2.chr16 T 13 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=19005.000000 s hg38.chr17_GL383563v3_alt 201466 13 + 375691 ACCAAGCTCCGTC s panTro4.chr17 190818 13 + 82630442 ACTAAGCTCCATT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204897 13 - 81552678 ACTAAGCTCCATC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112701 13 + 80904711 ACTAGGCTCCACC i rheMac3.chr16 C 0 T 111 s macFas5.chr16 118593 13 + 80997621 accaagctccatt i macFas5.chr16 T 37 C 0 s papAnu2.chr16 117103 13 + 74645514 ACGAAGCTCCAtt i papAnu2.chr16 T 37 C 0 s chlSab2.chr16 105686 13 + 75148670 ACTAGGCTCCACC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=1314.000000 s hg38.chr17_GL383563v3_alt 201479 1 + 375691 G s panTro4.chr17 190831 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204910 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112603 1 + 80904711 G i rheMac3.chr16 T 111 C 0 s macFas5.chr16 118606 1 + 80997621 g i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117116 1 + 74645514 g i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105699 1 + 75148670 G i chlSab2.chr16 C 0 T 37 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=27467.000000 s hg38.chr17_GL383563v3_alt 201480 18 + 375691 CTGCAGGACCTCTCAGAC s panTro4.chr17 190832 18 + 82630442 CTGCGGGACTTCTCAGAG i panTro4.chr17 C 0 T 74 s nomLeu3.chr19 204911 17 - 81552678 CTGCA-GACCTCTCAGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112604 18 + 80904711 CTGCAGGAACTCTCAGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118607 18 + 80997621 ctgcaggacttctcagag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117117 18 + 74645514 ctgcaggacttctcagag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105663 18 + 75148670 CTGCAGGAACTCTCAGAG i chlSab2.chr16 T 37 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=9933.000000 s hg38.chr17_GL383563v3_alt 201498 5 + 375691 CCTTT s panTro4.chr17 190776 5 + 82630442 CCTTT i panTro4.chr17 T 74 C 0 s nomLeu3.chr19 204928 5 - 81552678 CCTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112622 5 + 80904711 CCTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118625 5 + 80997621 ccttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117135 5 + 74645514 ccttt i papAnu2.chr16 C 0 T 37 s chlSab2.chr16 105681 5 + 75148670 CCTTT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=55820.000000 s hg38.chr17_GL383563v3_alt 201503 37 + 375691 ACTAAGCTCCGTCACTGTGGGACCTCTCAGAGCCTTT s panTro4.chr17 190781 37 + 82630442 ACCAAGCTCCGTCGCTGCGGGACCTCTCAGGGCCTTT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204933 36 - 81552678 ACTAAGCTCCATCACTGC-AGACCTCTCAGAGCCTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112627 37 + 80904711 ACTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118630 37 + 80997621 actaggctCCACGGCTGCGGGAACTCTCAGAGCCTTT i macFas5.chr16 C 0 T 74 s papAnu2.chr16 117103 37 + 74645514 ACGAAGCTCCAttgctgcaggacttctcagagccttt i papAnu2.chr16 T 37 C 0 s chlSab2.chr16 105686 37 + 75148670 ACTAGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=4404.000000 s hg38.chr17_GL383563v3_alt 201540 3 + 375691 ACT s panTro4.chr17 190818 3 + 82630442 ACT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204969 3 - 81552678 ACT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112664 3 + 80904711 ATT i rheMac3.chr16 C 0 T 66 s macFas5.chr16 118593 3 + 80997621 acc i macFas5.chr16 T 74 C 0 s papAnu2.chr16 117140 3 + 74645514 act i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105723 3 + 75148670 ACT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=9883.000000 s hg38.chr17_GL383563v3_alt 201543 8 + 375691 AAGCTCCG s panTro4.chr17 190821 8 + 82630442 AAGCTCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204972 8 - 81552678 AAGCTCCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 118596 8 + 80997621 aagctcca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117143 8 + 74645514 aGGCTCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105726 8 + 75148670 AGGCTCCA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e rheMac3.chr16 112667 66 + 80904711 T e ponAbe2.chr17 78890 0 + 73212453 C a score=252323.000000 s hg38.chr17_GL383563v3_alt 201551 174 + 375691 TCGCTGCGGGACCTCTCAGAGCCTTTACTAAGCTCCATCGCTGCAGGACCTCTCAGAGCCTTTACTAAGCTCCATCGCTGCGGGACCTCTCGGAGCCTTTACTAAGGTCCATCACTGCGGGACCTCTGGGAGCCTTTACTAAGGTCCATCACTGCGGGACCTCTCAGAGCCTTT s panTro4.chr17 190829 174 + 82630442 TTGCTGCGGGACTTCTCAGAGTCTTTACTAAGCTCTATCACTGCGGGACCTCTCAGAGCCTTTACCAAGCTCCATCGCTGTGGGACCTCTCGGGGCCTTTACTAAGCTCCCTCGCTGCGGGACCTCTCAGAGCCTTTACCAAGCTCCGACGCTGCGGGACCTCTCAGAGCCTTT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 204980 172 - 81552678 TCACTGCGGGACCTCTGAGAGCCTTTACTAAGCTCCATCACTGCA-GACCTCTCAGAGCCTTTACTAAGCTCCATCACTGCGGGACCTCTCAGAGCCTTTACTAAGCTCCATCACTGCGGGACCTCTCAGAGCCTTTACTAAGCTCCATCACTGC-AGACCTCTCAGAGCCTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112601 174 + 80904711 CCGCTGCAGGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTT i rheMac3.chr16 T 66 C 0 s macFas5.chr16 118604 174 + 80997621 ttgctgcaggacttctcagagcctttactaggctCCACGGCTGCGGGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117151 174 + 74645514 CCGCTGCGGGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCAGGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTCCACTGCTGCGGGAACTCTCACAGCCTTTATTAGGCTCCACCGCTGcgggacttctcagagccttg i papAnu2.chr16 C 0 T 222 s chlSab2.chr16 105734 136 + 75148670 CCGCTGCGGGACTTCTCAGAGCCTTTACTAGGCTCTATCGCTGCAGGAACTCTCAGAGCCTTTACTAGGCTCCATCGCTGCAGGAACTCTCAGAGCCTTTACTAGGCTCCA--------------------------------------CACTGCGGGACTTCTCAGAGCCTTT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=15844.000000 s hg38.chr17_GL383563v3_alt 201725 12 + 375691 ACTAAGCTCCAT s panTro4.chr17 191003 12 + 82630442 ACCAAGCTCCGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205152 12 - 81552678 ACTAAGCTCCAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112775 12 + 80904711 ATTAGGCTCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118778 12 + 80997621 ACTGGGCTCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117103 12 + 74645514 ACGAAGCTCCAt i papAnu2.chr16 T 222 C 0 s chlSab2.chr16 105870 12 + 75148670 ACTAGGATCCAT i chlSab2.chr16 C 0 T 221 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=115243.000000 s hg38.chr17_GL383563v3_alt 201737 71 + 375691 CACTGCGGGACCTCTCGGAGCCTTTACTAAGCTCCATCGCTGCGGGACCTCTCAGAGCCTTTACTAAGCTC s panTro4.chr17 191015 71 + 82630442 CACTGTGGGACCTCTCGGAGCCTTTACCAAGCGCCATCGCTGCGGGACCTCTCAGAGCCTTTACCAAGCTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205164 70 - 81552678 CACTGCAGGACCTCTGAGAGCCTTTACTAAGCTCCATCACTGC-AGACCTCTCAGAGCCTTTACTAAGCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112787 71 + 80904711 CGCTGCGGGACTTCTCAGAGCCTTTACTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118790 71 + 80997621 CGCTGCGGGACTTCTCAGAGCCTTGACTGggctccatcgctgcgggacttctcagagcctttactaagctc i macFas5.chr16 C 0 T 37 s papAnu2.chr16 117115 71 + 74645514 tgctgcaggacttctcagagcctttactaGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTACTAGGCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105661 71 + 75148670 CACTGCAGGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTTACTAGGCTC i chlSab2.chr16 T 221 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=4011.000000 s hg38.chr17_GL383563v3_alt 201808 2 + 375691 CA s panTro4.chr17 191086 2 + 82630442 CA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205234 2 - 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112858 2 + 80904711 CA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118824 2 + 80997621 ca i macFas5.chr16 T 37 C 0 s papAnu2.chr16 117186 2 + 74645514 CA i papAnu2.chr16 C 0 I 111 s chlSab2.chr16 105732 2 + 75148670 CA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=4471.000000 s hg38.chr17_GL383563v3_alt 201810 8 + 375691 TCGCTGCG s nomLeu3.chr19 205236 7 - 81552678 TCACTGC- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112860 8 + 80904711 CCGCTGCG i rheMac3.chr16 C 0 T 238 s papAnu2.chr16 117299 8 + 74645514 CCGCTGcg i papAnu2.chr16 I 111 C 0 s chlSab2.chr16 105734 8 + 75148670 CCGCTGCG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e macFas5.chr16 118826 0 + 80997621 C e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 191088 0 + 82630442 C a score=7204.000000 s hg38.chr17_GL383563v3_alt 201818 14 + 375691 GGACCTCTCAGAGC s nomLeu3.chr19 205243 14 - 81552678 AGACCTCTCAGAGC i nomLeu3.chr19 C 0 I 5 s papAnu2.chr16 117307 14 + 74645514 ggacttctcagagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105742 14 + 75148670 GGACTTCTCAGAGC i chlSab2.chr16 C 0 I 15 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e rheMac3.chr16 112868 238 + 80904711 T e macFas5.chr16 118826 0 + 80997621 C e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 191088 0 + 82630442 C a score=573.000000 s hg38.chr17_GL383563v3_alt 201832 2 + 375691 CT s nomLeu3.chr19 205262 2 - 81552678 CT i nomLeu3.chr19 I 5 C 0 s papAnu2.chr16 117321 2 + 74645514 ct i papAnu2.chr16 C 0 I 6 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e rheMac3.chr16 112868 238 + 80904711 T e macFas5.chr16 118826 0 + 80997621 C e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 191088 0 + 82630442 C a score=43372.000000 s hg38.chr17_GL383563v3_alt 201834 43 + 375691 AAGCTCTGTCGCTGCGGGACCTCTCAGAGCCTTTACCAAGCTC s panTro4.chr17 191088 35 + 82630442 --------TCGCTGCGGGACCTCTCAGAGCCTTTACCAAGCTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205264 43 - 81552678 AAGCTCCATCACTGCAGGACCTCTGAGAGCCTTTACTAAGCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112630 43 + 80904711 AGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTC i rheMac3.chr16 T 238 C 0 s macFas5.chr16 118826 35 + 80997621 --------tcgctgcgggacttctcagagcctttactaagctc i macFas5.chr16 C 0 T 37 s papAnu2.chr16 117329 43 + 74645514 GGGCTCCACCACTGcgggacttctcagagcctttactaAGCTC i papAnu2.chr16 I 6 T 112 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e ponAbe2.chr17 78890 0 + 73212453 C a score=40075.000000 s hg38.chr17_GL383563v3_alt 201877 37 + 375691 CGTCGCTGCGGGACCTCTCAGAGCCTTTACCAAGCTC s panTro4.chr17 191123 37 + 82630442 CATCGCTGCGGGACGTCTCAGAGCCTTTACCAAGCTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205307 36 - 81552678 CATCACTGC-AGACCTCTCAGAGCCTTTACTaagctc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112673 37 + 80904711 CACCGCTGCGGGAACTCTCAGAGCCTTTACTAGGCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118824 37 + 80997621 catcgctgcgggacttctcagagcctttactaagctc i macFas5.chr16 T 37 T 82 s papAnu2.chr16 117260 37 + 74645514 CACTGCTGCGGGAACTCTCACAGCCTTTATTAGGCTC i papAnu2.chr16 T 112 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e ponAbe2.chr17 78890 0 + 73212453 C a score=18376.000000 s hg38.chr17_GL383563v3_alt 201914 24 + 375691 CGTCGCTGCGGGACCTCTCAGAGC s panTro4.chr17 191160 24 + 82630442 CGTCACTGTGGGACCTCTCGGAGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205343 24 - 81552678 catcactgcgggacttctcagagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112710 24 + 80904711 CACCGCTGCGGGAACTCTCAGAGC i rheMac3.chr16 C 0 I 5 s papAnu2.chr16 117297 24 + 74645514 CACCGCTGcgggacttctcagagc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e macFas5.chr16 118861 82 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C a score=2210.000000 s hg38.chr17_GL383563v3_alt 201938 2 + 375691 CT s panTro4.chr17 191184 2 + 82630442 CT i panTro4.chr17 C 0 I 5 s nomLeu3.chr19 205367 2 - 81552678 ct i nomLeu3.chr19 C 0 I 5 s rheMac3.chr16 112739 2 + 80904711 TT i rheMac3.chr16 I 5 C 0 s macFas5.chr16 118779 2 + 80997621 CT i macFas5.chr16 T 82 C 0 s papAnu2.chr16 117321 2 + 74645514 ct i papAnu2.chr16 C 0 T 217 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e ponAbe2.chr17 78890 0 + 73212453 C a score=50248.000000 s hg38.chr17_GL383563v3_alt 201940 45 + 375691 AAGCTCCGTCGCTGCGGGACCTCTCAGAGCCTTTACTAAGCTCCG s panTro4.chr17 191191 45 + 82630442 AAGCTCCATCGCTGCGGGACGTCTCAGAGCCTTTACcaagctccg i panTro4.chr17 I 5 T 165 s nomLeu3.chr19 205374 45 - 81552678 aagctCCATCACTGCAGGACCTCTGAGAGCCTTTACTAAGCTCCA i nomLeu3.chr19 I 5 C 0 s rheMac3.chr16 112741 45 + 80904711 AGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118781 45 + 80997621 GGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGggctcca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117106 45 + 74645514 AAGCTCCAttgctgcaggacttctcagagcctttactaGGCTCCA i papAnu2.chr16 T 217 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e ponAbe2.chr17 78890 0 + 73212453 C a score=15267.000000 s hg38.chr17_GL383563v3_alt 201985 24 + 375691 TCACTGCGGGACCTCTCAGAGC-----CT s nomLeu3.chr19 205419 28 - 81552678 TCACTGC-AGACCTCTCAGAGCCTTTACT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112786 24 + 80904711 CCGCTGCGGGACTTCTCAGAGC-----CT i rheMac3.chr16 C 0 I 58 s macFas5.chr16 118826 24 + 80997621 tcgctgcgggacttctcagagc-----ct i macFas5.chr16 C 0 T 209 s papAnu2.chr16 117151 24 + 74645514 CCGCTGCGGGAACTCTCAGAGC-----CT i papAnu2.chr16 C 0 T 24 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 191236 165 + 82630442 T a score=1859.000000 s hg38.chr17_GL383563v3_alt 202009 28 + 375691 AAGTGCCATCGCTGTGGGACCTCTCGGG s nomLeu3.chr19 205447 28 - 81552678 AAGCTCCATCACTGCGGGACCTCTCAGA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e papAnu2.chr16 117175 24 + 74645514 T e rheMac3.chr16 112810 58 + 80904711 I e macFas5.chr16 118850 209 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 191236 165 + 82630442 T a score=4378.000000 s hg38.chr17_GL383563v3_alt 202037 17 + 375691 GCCTTTACCAAGCTCCG s panTro4.chr17 191071 17 + 82630442 GCCTTTACCAAGCTCCA i panTro4.chr17 T 165 C 0 s nomLeu3.chr19 205475 17 - 81552678 GCCTTTACTAAGCTCCA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105756 15 + 75148670 I e papAnu2.chr16 117175 24 + 74645514 T e rheMac3.chr16 112810 58 + 80904711 I e macFas5.chr16 118850 209 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C a score=7777.000000 s hg38.chr17_GL383563v3_alt 202054 8 + 375691 TCGCTGCA s panTro4.chr17 191088 8 + 82630442 TCGCTGCG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205492 8 - 81552678 TCACTGCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 118641 8 + 80997621 CGGCTGCG i macFas5.chr16 T 209 C 0 s papAnu2.chr16 117151 8 + 74645514 CCGCTGCG i papAnu2.chr16 T 24 C 0 s chlSab2.chr16 105771 8 + 75148670 TCGCTGCA i chlSab2.chr16 I 15 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e rheMac3.chr16 112810 58 + 80904711 I e ponAbe2.chr17 78890 0 + 73212453 C a score=81827.000000 s hg38.chr17_GL383563v3_alt 202062 51 + 375691 GGACCTCTCAGAGCCTTTACTAAGCTCCATCGCTGTGGGAATTCTCAGAGT s panTro4.chr17 191096 51 + 82630442 GGACCTCTCAGAGCCTTTACCAAGCTCCATCGCTGCGGGACGTCTCAGAGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205500 49 - 81552678 -GACCTCTCAGAGCCTTTACTAAGCTCCATCGCTGC-AGACCTCTCAGAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112868 51 + 80904711 GGACTTCTCAGAGCCTTGACTGGGCTCCACCGCTGCGGGACTTCTCAGAGC i rheMac3.chr16 I 58 C 0 s macFas5.chr16 118649 51 + 80997621 GGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCGGGAACTCTCAGAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117159 51 + 74645514 GGAACTCTCAGAGCCTTTACTAGGCTCCACCGCTGCAGGAACTCTCAGAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105779 51 + 75148670 GGAACTCTCAGAGCCTTTACTAGGCTCCATCGCTGCAGGAACTCTCAGAGC i chlSab2.chr16 C 0 T 74 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=182921.000000 s hg38.chr17_GL383563v3_alt 202113 123 + 375691 CTTTACTAAGCTCCCTCGCTGCGGGACCTCTCAGAGCCTTTACTAAGCTCCATCGCTGCGGGACCTCTCAGAGCCTTTACCAAGCTCCACCACTGCGGGACCTCTCAGAGCCTTTACTAAGCT s panTro4.chr17 191147 123 + 82630442 CTTTACCAAGCTCCGTCACTGTGGGACCTCTCGGAGCCTTTACCAAGCTCCATCGCTGCGGGACGTCTCAGAGCCTTTACcaagctccgtcgctgcgggacctctcggagcctttactaagct i panTro4.chr17 C 0 T 37 s nomLeu3.chr19 205549 121 - 81552678 CTTTACTaagctccatcactgcgggacctctcagagcctttactaagctccatcattgc-agacctctcagagCCTTTACTAAGCTCCATCATTGC-AGACTTCTCAGAGCCTTTACTaagct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112919 123 + 80904711 CTTGACTGGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGggct i rheMac3.chr16 C 0 T 74 s macFas5.chr16 118700 123 + 80997621 CTTTATTAGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGGGCTCCACCGCTGCGGGACTTCTCAGAGCCTTGACTGggct i macFas5.chr16 C 0 T 37 s papAnu2.chr16 117210 123 + 74645514 CTTTACTAGGCTCCACCGCTGCGGGAACTCTCAGAGCCTTTATTAGGCTCCACTGCTGCGGGAACTCTCACAGCCTTTATTAGGCTCCACCGCTGcgggacttctcagagccttgaCTGGGGC i papAnu2.chr16 C 0 T 37 s chlSab2.chr16 105756 122 + 75148670 CTTTACTAGGCTCTATCGCTGCAGGAACTCTCAGAGCCTTTACTAGGCTCCATCGCTGCAGGAACTCTCAGAGCCTTTACTAGGCTCCA-CACTGCGGGACTTCTCAGAGCCTTTACTAGGAT i chlSab2.chr16 T 74 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=32775.000000 s hg38.chr17_GL383563v3_alt 202236 38 + 375691 TCATCCCTGTGGGACCTCTCAGAGCCTTTACC-AAGCTC s panTro4.chr17 191233 38 + 82630442 ccgtcgctgcgggacctctcggagcctttact-aagctc i panTro4.chr17 T 37 T 296 s nomLeu3.chr19 205670 38 - 81552678 ccctcactgcgggacttctcagagcctttact-aagctc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 112968 38 + 80904711 CCACCGCTGCGGGACTTCTCAGAGCCTTGACT-GGGCTC i rheMac3.chr16 T 74 C 0 s macFas5.chr16 118786 38 + 80997621 CCACCGCTGCGGGACTTCTCAGAGCCTTGACT-Gggctc i macFas5.chr16 T 37 C 0 s papAnu2.chr16 117296 39 + 74645514 CCACCGCTGcgggacttctcagagccttgaCTGGGGCTC i papAnu2.chr16 T 37 C 0 s chlSab2.chr16 105878 1 + 75148670 --------------------------------------C i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=45907.000000 s hg38.chr17_GL383563v3_alt 202274 32 + 375691 CGCCACTGCGGGACCTCTCAGAGCCTTTACTA s panTro4.chr17 190975 32 + 82630442 CGACGCTGCGGGACCTCTCAGAGCCTTTACCA i panTro4.chr17 T 296 C 0 s nomLeu3.chr19 205708 31 - 81552678 catcattgc-agacctctcagagCCTTTACTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113006 32 + 80904711 CACCGCTGCGGGACTTCTCAGAGCCTTGACTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118824 32 + 80997621 catcgctgcgggacttctcagagcctttacta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117335 32 + 74645514 CACCACTGcgggacttctcagagcctttacta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105879 31 + 75148670 CAT-GCTGCGGGAACTCTCAGAGCCTTTACTA i chlSab2.chr16 C 0 T 139 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=5965.000000 s hg38.chr17_GL383563v3_alt 202306 5 + 375691 AACTC s panTro4.chr17 191007 5 + 82630442 AGCTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205739 5 - 81552678 AGCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113038 5 + 80904711 ggctc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118856 5 + 80997621 agctc i macFas5.chr16 C 0 T 37 s papAnu2.chr16 117367 5 + 74645514 AGCTC i papAnu2.chr16 C 0 T 37 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105910 139 + 75148670 T e ponAbe2.chr17 78890 0 + 73212453 C a score=2255.000000 s hg38.chr17_GL383563v3_alt 202311 2 + 375691 CA s panTro4.chr17 191012 2 + 82630442 CG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205744 2 - 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113043 2 + 80904711 ca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118824 2 + 80997621 ca i macFas5.chr16 T 37 C 0 s papAnu2.chr16 117335 2 + 74645514 CA i papAnu2.chr16 T 37 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105910 139 + 75148670 T e ponAbe2.chr17 78890 0 + 73212453 C a score=53180.000000 s hg38.chr17_GL383563v3_alt 202313 35 + 375691 TCACTGCGGGACCTCTCGGAGCCTTTACCAAGCTC s panTro4.chr17 191014 35 + 82630442 TCACTGTGGGACCTCTCGGAGCCTTTACCAAGCGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205746 34 - 81552678 TCATTGC-AGACCTCTCAGAGCCTTTACTAAGCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113045 35 + 80904711 ctgctgcaggacttctcagagcctttactaagctc i rheMac3.chr16 C 0 T 38 s macFas5.chr16 118826 35 + 80997621 tcgctgcgggacttctcagagcctttactaagctc i macFas5.chr16 C 0 T 38 s papAnu2.chr16 117337 35 + 74645514 CCACTGcgggacttctcagagcctttactaAGCTC i papAnu2.chr16 C 0 T 38 s chlSab2.chr16 105771 35 + 75148670 TCGCTGCAGGAACTCTCAGAGCCTTTACTAGGCTC i chlSab2.chr16 T 139 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e ponAbe2.chr17 78890 0 + 73212453 C a score=11536.000000 s hg38.chr17_GL383563v3_alt 202348 26 + 375691 CATCACTGCAGGACCTCTCAGAGCCT s panTro4.chr17 191049 26 + 82630442 CATCGCTGCGGGACCTCTCAGAGCCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 205780 25 - 81552678 CATCATTGCA-GACCTCTCAGAGCCT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 105806 26 + 75148670 CATCGCTGCAGGAACTCTCAGAGCCT i chlSab2.chr16 C 0 I 50 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e papAnu2.chr16 117372 38 + 74645514 T e rheMac3.chr16 113080 38 + 80904711 T e macFas5.chr16 118861 38 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C a score=6128.000000 s hg38.chr17_GL383563v3_alt 202374 32 + 375691 -----AAGCTCCGTCGCTGTGGGACCTCTCAGAGCCT----- s panTro4.chr17 191075 37 + 82630442 TTACCAAGCTCCATCGCTGCGGGACCTCTCAGAGCCT----- i panTro4.chr17 C 0 I 124 s nomLeu3.chr19 205805 41 - 81552678 TTACTAAGCTCCATCACTGC-AGACCTCTCAGAGCCTTTACT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105832 50 + 75148670 I e papAnu2.chr16 117372 38 + 74645514 T e rheMac3.chr16 113080 38 + 80904711 T e macFas5.chr16 118861 38 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C a score=268.000000 s hg38.chr17_GL383563v3_alt 202406 5 + 375691 AAGCG s nomLeu3.chr19 205846 5 - 81552678 AAGCT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e calJac3.chrUn_GL286409 922253 0 - 1291538 C e chlSab2.chr16 105832 50 + 75148670 I e papAnu2.chr16 117372 38 + 74645514 T e rheMac3.chr16 113080 38 + 80904711 T e macFas5.chr16 118861 38 + 80997621 T e ponAbe2.chr17 78890 0 + 73212453 C e panTro4.chr17 191112 124 + 82630442 I a score=2100.000000 s hg38.chr17_GL383563v3_alt 202411 1 + 375691 C s ponAbe2.chr17 78890 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 205851 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113042 1 + 80904711 c i rheMac3.chr16 T 38 C 0 s macFas5.chr16 118823 1 + 80997621 c i macFas5.chr16 T 38 C 0 s papAnu2.chr16 117334 1 + 74645514 C i papAnu2.chr16 T 38 C 0 s calJac3.chrUn_GL286409 922253 1 - 1291538 c i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e canFam3.chr9 15679536 983 - 61074082 I e chlSab2.chr16 105832 50 + 75148670 I e panTro4.chr17 191112 124 + 82630442 I a score=4494.000000 s hg38.chr17_GL383563v3_alt 202412 2 + 375691 CA s ponAbe2.chr17 78891 2 + 73212453 CG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 205852 2 - 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113043 2 + 80904711 ca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118824 2 + 80997621 ca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117335 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 922254 2 - 1291538 ca i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15680519 2 - 61074082 ca i canFam3.chr9 I 983 C 0 e mm10.chr11 75856824 9 + 122082543 I e chlSab2.chr16 105832 50 + 75148670 I e panTro4.chr17 191112 124 + 82630442 I a score=3334.000000 s hg38.chr17_GL383563v3_alt 202414 2 + 375691 TC s panTro4.chr17 191236 2 + 82630442 tc i panTro4.chr17 I 124 C 0 s ponAbe2.chr17 78893 2 + 73212453 TC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 205854 2 - 81552678 TC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113045 2 + 80904711 ct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118826 2 + 80997621 tc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117337 2 + 74645514 CC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 922256 2 - 1291538 tc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15680521 2 - 61074082 tt i canFam3.chr9 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I e chlSab2.chr16 105832 50 + 75148670 I a score=109862.000000 s hg38.chr17_GL383563v3_alt 202416 35 + 375691 Gctgcaggacctctcagagcctttactaagctcag s panTro4.chr17 191238 35 + 82630442 gctgcgggacctctcggagcctttactaagctcag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 78895 35 + 73212453 Gctgcgggacctctcagagcctttactaagctcag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 205856 34 - 81552678 ATTGCA-GACTTCGCAGAGCCTTTACTAAGCTCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 113047 35 + 80904711 gctgcaggacttctcagagcctttactaagctcag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118828 35 + 80997621 gctgcgggacttctcagagcctttactaagctcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117339 35 + 74645514 ACTGcgggacttctcagagcctttactaAGCTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105882 35 + 75148670 GCTGCGGGAACTCTCAGAGCCTTTACTAGGCTCAG i chlSab2.chr16 I 50 C 0 s calJac3.chrUn_GL286409 922258 35 - 1291538 actgcaggacttgtcagagcctttactatgctaac i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15680523 35 - 61074082 actgcaggacttgtcagagccttgaatgtgccaat i canFam3.chr9 C 0 C 0 e mm10.chr11 75856824 9 + 122082543 I a score=189600.000000 s hg38.chr17_GL383563v3_alt 202451 57 + 375691 gtgcacagggttatcccagagggCAAAAGAACAC---ACCGTGCTCTCTACCCGCAATCT s panTro4.chr17 191273 57 + 82630442 gtgcacagggttatcccagagggCAAAAGAACAC---ACCATGCTCTCTGTCCGCAATCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 78930 57 + 73212453 gtgcacagggttatcccagaggacaaCAGAACAC---ACCATGCTCTCTACCCGCAATCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 205890 57 - 81552678 GTGCACAGGGTTATCCCAGAGGGCAAAAGAACAC---ACCATGCTCTCTACCTGCAATCT i nomLeu3.chr19 C 0 M 917 s rheMac3.chr16 113082 56 + 80904711 gtgcaCAGGGTCATCCCAG-GGGCAAAAGAACAC---ACCGTGCTCTCTACCCAAAATCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118863 56 + 80997621 gtgcaCAGGGTCATCCCAG-GGGCAAAAGAACAC---ACCGTGCTCTCTACCCAAAATCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117374 56 + 74645514 GTGCACAGGGTCATCCCAG-GGGCAAAAGAACAC---ACCGTGCTCTCTACCCAAAATCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105917 56 + 75148670 GTGCACAGGGTCATCCCAG-GGGCAAAAGAACAC---ACCGTGCTCTCTACCCAAAATCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 922293 56 - 1291538 gtgcacagtgTTAGCCGAC-AGGCAAAAGAACAC---ACAGTGCTCTGGACTCAAAATCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75856833 56 + 122082543 gtgcacagaattctccagt-aggCAAAAGAACAC---ACCATGTTAGCTACTTAGAATCT i mm10.chr11 I 9 C 0 s canFam3.chr9 15680558 60 - 61074082 atacaAAGAGTTCTCCATCAGAGCCAAAAAACACCAAGTGGTGTTTCCCACTTGGAATCT i canFam3.chr9 C 0 C 0 a score=18160.000000 s hg38.chr17_GL383563v3_alt 202508 6 + 375691 GCCTGG s panTro4.chr17 191330 6 + 82630442 GCCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 78987 6 + 73212453 GCCCGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 113138 6 + 80904711 GCCCGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118919 6 + 80997621 GCCCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117430 6 + 74645514 GCCCGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105973 6 + 75148670 GCCCGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 922349 6 - 1291538 GCCTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75856889 6 + 122082543 GCCTGG i mm10.chr11 C 0 I 752 s canFam3.chr9 15680618 6 - 61074082 ACTCAA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 205947 917 - 81552678 M a score=1971909.000000 s hg38.chr17_GL383563v3_alt 202514 892 + 375691 ATGGTTTTCCTAGAGAAACTAGACCTTAGTAATGGGTC-------TGCATGGA--------CTCGGCACTTAACTGGGCA--------------------------------------------------------GGGCACCTCCTTATGCT-CACAGTGCCAGGCAC-AG-ACTGCCACGTCCAGACTAGGTCCCTGGCATGAATCCCTCACTGCCCCTTCCAGCCACCCTGTGTGAAGGGCCTGCTTTTGTGTCGTTCTTGAACGGCCTGGAACCTGTCTGGTGGGATGGGTGCTTCATGGCACCCGCTTTGGAAAACCCTTTCTGATCCTCTTGGAGCCTTCCTACAACACGtatttatttgaatgggtaatgcaggcacatggtctaaaaatccacaaagtgcaaaagTAGCCAGTCTCCTCCCCCATTCCCAGAAGCA------------------------TCGAAGAAGCtt----attatctccacttttcaggtggggaaactgaggctccaacaagttcagcaatttccccaaagccagcacaCCCCTCTGTTGGCCTCTACTCCACACGGAAGGCCCCAGAGTCTCACCCAACAGTTTACAGATGCAAAGCAGATGCTCACTAA-ACTGCAGTTGAGTGGTGAATAAATCCTCAGTGGCTCAGACGTCCGTGTGGACCCTTAGTGTCCTACAGGCAGGACACC-AGAGCGGAGAGGACTGCCTGACAGGAGGAAGCAGCAAACACACAGCAGCCACCAAGGCCACCCCATCTCTGAAGAGCTGCTGCAAGGCTCATTAGAGCAGGTACCCAAGTCCAAAAGGCCACGG--GGGCCATGGGGTGCC--AGCCAAGGGCTCGCTACGCCTCCCTCTG--ATGAGCGAAAGCTCT---------------------------------GCTCATCCTGCCCTGAGCACGTCACCTCCCTGTCCTCCACCGTGGGCTGGGCCT---GGGGGACCCCAAATGAAGCAGACCCCTAAGAACCATCTGTGAAC s panTro4.chr17 191336 896 + 82630442 ATGGTTTTCCTAGAGAAACTCAACCTTAGTAATGGGTC-------TGCAGGGA--------CTCGGCACTTAACTGGGCA--------------------------------------------------------GGGCACCTCCTTATGCT-CACAGTGCCAGGCAC-GG-ACTGCCACGTCCAGACTAGGTCCCTGGCATGAATCCCTCACTGCCCCTTCCAGCCACCCTGTGTGAAGGGCCTGCTTTTGTGTCGTTCTTGAACGGCCTGGAACCTGCCTGGTGGGATGCGTGCTTCATGGCACCCGCTTTGGAAAACCCTTTCTGATCCTCTTGGAGCCTTCCCACAACACAtatttatttgaataggtaatgcaggcacatggtctaaaaatccacaaagtgcaaaggtagccagtCTCCTCCCCCATTCCCAGAAGCA------------------------TCGAAGAAGCTTGGttattatctccacttttcaggtggggaaactgaggctccaacaagttcggcaatttccccaaagccagcacaCCCCTCTGTTGGCCTCTACTCCACACGGGGGGCCCCAGAGCCTCACCCAACAGTTTACAGATGCAAAGCAGATGCTCACTAA-ACTGCGGTTGAGTGGTGAATAAATCCTCAGTGGCTCAGACGTCCGTGTGGACCCTTAGTGTCCTACAGGCAGGACACC-AGAGCGGAGGGGACTGCCTGACAGGAGGAAGCAGCAAACACACAGCAGCCACCAAGGCCACCCCATCTCTGAAGAGCTGCTGCAAGGCTCATTAGAGCAGGTACCCAAGTCCAAAAGGCCACGG--GGGCCATGGGGTGCC--AGCCAAGGGCTCGCTACGCCTCCCTCTG--ATGAGCAAAGGCTCT---------------------------------GCTCATCCTGCCCTGAGCACGCCACCTCCCTGTCCTCCACCGTGGGCTGGGCCT---GGGGGACCCCAAATGAAGCAGGCCCTTAAGAACCGTCTGTGAAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 78993 950 + 73212453 ATGGTTTTCCTAGAGAAACGCGACCTTGGTAATGGGTC-------TGTGTGGA--------CTTGGCACTTAACTGGGCAGCACTT--ACCGTCCACTTGTAGAGCAATGAGCATCTGCATCACCAAGTAGACTGTGGGCACCTCCTAATGCT-CGGAGTGCCAGGCAC-GG-ACTGCCACGTCCAGACTAGGTCCCTGGCATGAACCCCTCACTGCCCCTTCCAGCCACCCTGTGTGAAGGGCCTGCTTTTGTGTGGTTCTTGAACGGCCTGGAACCTGTCTGGTGGGATGTGTGCTTCATGGCACCCACTTTGGAAAACCCTTTCTGATCCTCTCAGAGCCTTCCTACAACACACATTTATTTCAATGGGTAATGCAGGCACATGGTCTAAAAATCCACAAAGTGCAAAAGTAGCCAGTCTCCTCCCCCATTCCCAGAAGCA------------------------TTGAAgaagcttggttattatctccacttttcaggtggggaaactgaggctccaacaagttcagcaatttccccaaagccaGTACACCCCTCTGTTGGCCTCTACTCCACACGGAAGGCCCCAGAGTCTCACCCAACAGTTTACAGATGCAAAGCAGATGCTCACTAA-ACTGCGGTTGAGTGGTGAATAAATCTTCAGTGGGTCAGACGTCAGTGTGGACTCTTAGTGTCCCACAGGCAGGACACC-AGAGCGGAGGGGACTGCCTGACAGGAGGAAGCAGCAAACACACAGCAGCCACCAAGTCCACCCCATCTCGGGAGAGCTGCTGCAAGGCTCATTAGAGCAGGTACCCAAGTCCAAAAGGTCACGG--GGGCCATGCGGTGCC--AGCAAAGGGCTCGCTACGCCTCCCACTG--ATGAGCAAAGGCTCT---------------------------------GCTCATCCTGCCCTGAGCACGCCACCTCCCTGTCCTCCACCGTGGGCTGGGCCT---GGGGGACCCCAAATGAAGCGGGCCCTTAAGAGCCAGCTGTGAAT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 113144 960 + 80904711 ATGG--TTCCTAGAGAAACTCGACCGTAGTAATGGGTC-------TGCATAGA--------CTCCGCACCTAACTAAGCAGCATTG--ACCGTCCACTCATAGAGTGATGTGCGTCTGCACCGCCAAGTAGGCTGTGGGCACCTCCTTCTGCT-CAGAGTACCAGGCAC-AG-ACGGCCAAGTCCAGACGAGGTCCCTGGCGTGAATCCCTCACTGGCCTTCCCAGCCACGCTGTGC--------------------------GAACGGCCT-GAGCCTGTCTGGTGGGATGGATGCTTCGTGGCACCCGCTTTGGAAAACCCTTTCTGAT-ATCTCGAATCCTTCCTACAACACATATTTATCCGAATGTGTAACGAAGGCACGTGGCCTAAAAATCCAGAAAGTGCGAAAGTAGCCAGTCTCCTCCCCCCTTCCCAGAAGCATGTGGTGA------TT-ACAGGGCTCAAAGAAGCTTGGttattatctccacctttcaggtggggaaactgaggctccaacaagttcagcaatttccccaagaccagcacaCCATTCCATGGGCCTCTACTCCACACGGAAGGCCCCAGAGTCTCACCCAACAGTTTACAGACACAAAGCAGATGCTCACTAA-ACTACAGA-------TGAATAAATCCTCAGTGGGTCGGACGTCAGTGTGAACTCTTAGTGTCCTACAGGCAGGACCCC-AGAGCGGAGGGGACTGCCCGACAGGAGGAAGAAGCAAACACACAGCAGCCACCAAGGCCACCCCGTCTCTGGAGAGCTCCTGCGAGGCTCATTAGAGCAGGTGCCCAAGTCCGAGAGGTCACGG--GGGCCACG-GGTGCC--GGCAAAGGGCTCGCTGAGCCTCCCACTG--ATGAGCAAAGGCTCTGTCCATTCTGCCCTGAGCGCGCCGCCCCCCTGCGCCCATCCTGCCCTGAGCGCGCCGCCCCCCTGTCCTCCACCGTGGGCTGGGCC----GGGGAACACC-AATGAAGCAAGCCCTTAAGAGCCATCTGTGGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 118925 925 + 80997621 ATGG--TTCCTAGAGAAACTCGACCGTAGTAATGGGTC-------TGCATAGA--------CTCCGCACCTAACTGAGCAGCACTG--ACCGTCCACTCATAGAGTGATGTGCGTCTGCACCGCCGAGTGGGCTGTGGGCACCTCCTTCTGCT-CAGAGTACCAGGCAC-GG-ACGGCCAAGTCCAGACGAGGTCCCTGGCGTGAATCCCTCACTGGCCTTCCCAGCCACGCTGTGC--------------------------GAAGGGCCT-GAGCCTGTCTGGTGGGATGGATGCTTCGTGGCACCCGCTTTGGAAAACCCTTTCTGAT-ATCTCGAATCCTTCCTACAACACATATTTATCCGAATGGGTAACGAAGGCACGTGGCCTAAAAATCCACAAAGTGCGAAAGTAGCCAGTCTCCTCCCCCCTTCCCAGAGGCATGTGGTGA------TT-AC-GGGTTcaaagaagcttggttattatctccacctttcaggtggggaaactgaggctccaacaagttcagcaacttccccaagaccagcacaccaTTCCATGGGCCTCTACTCCACACGGAAGGCCCCAGAGTCTCACCCAACAGTTTACAGACGCAAAGCAGATGCTCACTAA-ACTACAGA-------TGAATAAATCCTCAGTGGGTCGGACGTCAGTGTGAACTCTTAGTGTCCTACAGGCAGGACCCC-AGAGCGGAGGGGACTGCCCGACAGGAGGAAGAAGCAAACACACAGCAGCCACCAAGGCCACCCCGTCTCTGGAGAGCTCCTGCGAGGCTCATTAGAGCAGGTGCCCAAGTCCGAGAGGTCACGG--GGGCCACG-GGTGCC--GGCAAAGGGCTCGCTGAGCCTCCCACTG--ATGAGCAAAGGCTCT---------------------------------GCCCATCCTGCCCTGAGCGCGCCGTCCCCCTGTCCTCCGCCGTGGGCTGGGCC----GGGG-ACACC-AATGTAGCAAGCCCTTAAGAGCCATCTGTGGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 117436 988 + 74645514 ATGG--TTCCTAGAAAAACTCGACCGTAGTAATGGGTC-------TGCATAGA--------CTCCGCACCTAACTGAGCAGCACCG--ACCGTCCACTCATAGAGTGATGTGCGTCTGCACCGCCGAGTGGGCTGTGGGCACCTCCTTCTGCT-CAGAGTACCAGGCAC-GG-ACGGCCAAGTCCAGACGAGGTCCCTGGCGTGAACCCCTCACTGGCCTTCCCAGCCACGCTGTGCGAAGGGCCTGCTTTTGTGTGGTTGTTGAACGGCCT-GAGCCTGTCTGGTGGGATGGATGCTTCGTGGCACCCACTTTGGAAAACCCTTTCTGATCCTCTCGAATCCTTCCTACAACACATATTTATCTGAATGGGTAATGAAGGCTCGTGGTCTAAAAATCCACAAAGTGGGAAAGTAGCCAGTCTCCTCCCCCATTCCCAGAAGCATGCGGTGA------TTAACAGGGTTCAAAGAAGCTTGGTTATTATCTCCACCTttcaggtggggaaactgaggctccaacaAGTTCAGCAATTTCCCCAAGGCCAGCACACCATTCCATGGGCCTCTACTCCACACGGAAGGCCCCAGAGTCTCACCCAACAGTTTACAGACGCAAAGCAGATGCTCACTAA-ACTACAGA-------TGAATAAACCCTCAGTGGGTCGGACGTCAGTGTGAACTCTTAGTGTCCTACAGGCAGGACCCC-AGAGCGGAGGGGACTGCCCGACACGAGGAAGAAGCAAACACACAGCAGCCACCAAGGCCACCCCGTCTCTGGGGAGCTCCTGCGAGGCTCATTAGAGCAGGTGCCCAAGTCCGAGAGGTCACGG--GGGCCACG-GGTGCC--GGCAAAGGGCTCGCTGAGCCTCCCACTG--ATGAGCAGAGGCTctgcccatcctgccctgagcgcgccgcccccctgcgcccatcctgccctgagcgcgccgcccccctgtcctccgccATGGGCTGGGCC----GGGGGACACC-AATGAAGCAAGCCCTTAAGAGCCATCTGTGGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 105979 959 + 75148670 ATGG--TTCCTAGAGAAACTCGACCGTAGCAATGGGTC-------TGCATAGA--------CTCCGCACCTAACTGAGCAGCACTG--ACCGTCCACTCATAGAGTGATGTGCGTCTGCACTGCCAAGTAGGCTGTGGGCACCTCCTTCTGCT-CAGAGTACCAGGCAC-GG-ACCGCCAAGTCCAGACGAGGTCCCTGGCGTGAATCCCTCACTGGCCTTCCCAGCCGCCCTGTGCGAAGGGCCTGCTTTTGTGTGATTGTTGAACGGCCT-GGGCCTGTCTGGTGGG-TGGATGCTTCGTGGCACCCACTTTGGAAAACCCTTTCTGATCCTCTGGAATCCTTCCTACAACACATATTTATCTGAATGGGTAATGAAGGTACGTGGTCTATAAATCCACGAAGTGCGAAAGTAGCCAGTCTCCTCCCCCCTTCCCAGAAGCATGTGCTGA------TT-ACAGGGTTcaaagaagcttggttattatctccacctttcaggtagggaaactgaggctccaacaagttcagcaatttccccaaggccagcacaCCGTTCC-TGGGCCTCTACTTCACACAGAAGGCCCCAGAGTCTCACCCAACAGTTTACAGATGCAAAGCAGCTGCTCACTAA-ACTACAGATGAGTGGTGAATAAATCCTCAGGGGGTCAGACGTCAGTGTGGACTCTTAGTGTCCTACAGGCAGGACCCC-AGAGCGGACGGGACCGCCCGACGGAAGGAAGAAGCAAACACACAGCAGCCACCAAGGCCACCCCGTCTCTGGAGAGCTCCTGTGAGGCTCATTACAGCAGGTGACCAAGTCCGAGAGGCCGCGG--GGACCACA-GGAGCC--GGCAAAGGGCTCGCTGAGCCTCCCACTG--ATGAGCAAAGGCTCT---------------------------------GCCCATCCTGCCCTGAGCGCGCTGCCTCCCTGTCCTCCGCCGTGGGCTGGGCC----GGGGGACACC-AATGAAGCAAGCCCTTAAGAGCCATCTGTGGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 922355 880 - 1291538 CTGGCTCTCCTAGAGAAACTCGACCTTAG-GATGGGTCGAGTTAGTGCCTAGGATAAGACCTTAGGCACTTATCCGGCCAGCACTT--ACTGTCCACTCGTGAAGTGATGTGTATCGGCCTCTCCAAGGAGGCTTGAGGCACCTCCTCATGCTGCAGAGCCCCAAGCCTGGG-ACCACCAAGTCCAGACAGGGTCCCGGG-GTGGATCCCTCCCTGCCCCTGACAGCCACCCTGAGT--------------------------GGAGGGCCTGGAACCTGTCTGGTGGGATGGAGGCGTCATGGCACCCACTTTGGAAAACCCTTTCTGATCCCCTCGGAGCCTTCCTACCACACGTATTTATGTGAATGGGTAATGCAGGCACATAGTCTAAACATCCAC--AGCGCAAAAGTAACCAGTCTCCTCCCCCATCCCCAGAGATGT-----------------------Ttgaggaagctcagtgattatctctgcttttcaggtggggaaactgaggctccaacaagttcagcaatttgcccaaagccagcaca-TATTCTGTTGGCCTCTACTCCACTCAGAAGGCCCT--AGTCCCACCCAGCAGTTTACAGATGCCAGGTGGCTACTCACTAATAAAGCGGTTGAGTGGTGAATAAATCCTGAGTGGGTCAGATGTCAGGGTGGGCTCTCAGAACCCCACAGGCAGG-------------------------------AGGAAGAAGCAA----ACAGCAGCCACCACGGCCACCCTCTCTCTGGAGAGCTGCTGCGAGGCTCATTAGAGCAGCTTCCCAAGTCCAAGAGGCCACGGCAAGGCCACG-GGGGCCATGGGGTGGGGCTGGCTGAGCCTCCCATTGCTCTGAGCAAAGGCTCT-----------------------------------------------GAGCAGGCCACCTCCCTGTCCTCTGCTGTAGACTGGGCCT---GGGG-----C--------CAAGCCCTAAAGAGTCGTCTGTGAAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15680624 820 - 61074082 CAAGTTTTCCTACAGATGCTCAACCCTAGTAATTGGTC-------TGTGTAGA--------CTCAGCACCTAACTGTGCAGCACCGGAATCACTCAACTATCATG-------------------------------AGTCATCTCTTTATGCTCCAGAGTGCCAGACAC-AGTGCCACTGAGTCCCAACCCTGTCTCTGGCTTGAA-------------------------------------------------------------------G------------GGGTTGAATGGCTCATGGAGCCCCCTTTAAAAAATCCTTTCCGGTCCTCTCATGGCCCTCCTATGGGAAGTATTTATTTGAATTGACAGCGTGTATACATGGTCTA-AAATTCACAGAGTGCAAAATTAA--AGTCTCCT-CCCCATTCCCAGAGGCATCCAGTGAGAaattct--------ttgaggaagctc--ttattatccccactttccagatgggaaaaccgaggctctgacaacttaagcaactcgcccaaggccaGCCCACCATTCTATTGGCCTCTATTCCACACTGGAGGCCCCAGAGTCTCATCCCAGTGTTTACAGAAGCAAAGAAGATGCTCACTAA-G-TGTGGCTGAGTGGTGAGTAAAGCCTCAGCAGGGCAGACATCACCATGGACTCTAAGTGTCCTGCAGACTGGGTGCCTAGAGAGAAGGGAGCTGCT--------------------------GTGACTGCCAAGGCCACCCTGTCTTTGCACAGCTGCCACATGGTTTCTGAGAACATGTGCCCAAGCCCATGAAGCCACTG-----------GTGGCC--AGTGAGGAGCTCACTTGGCCTCCCTGTG--CTGAGCAAAGG-TCT-------------------------------GAGCACCTGTCACCCTGAGCGTACCAGCCTCCTGCCCCCCAACATGCACTGGGCCTCAGAGGGAACA---AATGAAGCAAGCCTTCAAGAGCCAACtgtatac i canFam3.chr9 C 0 I 17 e mm10.chr11 75856895 752 + 122082543 I e nomLeu3.chr19 205947 917 - 81552678 M a score=784857.000000 s hg38.chr17_GL383563v3_alt 203406 386 + 375691 GGCGGGGCCCGTGCAGGCTTTGAACCGCACGCCACACTGTCTCCCCCACCCGCCTTGGAAGttttctcttt--tttttttactttttttttttttgagacagggtcttgctctgtcacccaggacggagtgcagtggagcaatcggctcactgcagccttcacctgcccaggctcaggtgatcctcccacctcaccctcccgagtagctgggactataggtggtgtgcgccaatacacccagctaatttttgtattttttgtagagatggggttttaccatgttactcaggctggtctctaactcctgggctcaagcaatctgcccacctctgcctcccaaagtgctgggattacaaacacgagccaccacgcctagccTCTCCCTTT s panTro4.chr17 192232 386 + 82630442 GGCGGGGCCTGCACAGGCTTTGAACCGCACGCCACACTGTCTCCCCCACCAGCCTTGGAAGttttctcttt--tttttttactttttttgtttttgagacagggtcttgctctgtcacccaggaaggagtgcagtggagcaaccggctcactgcagccttcacctgcccaggctcaggtgatcctcccacctcaccctcccgagtagctgggactataggtggtgtgtgccaatacatccagctaatttttgtattttttgtagagatggggttttaccatgctgctcaggctggtctctgactcctgggctcacgcaatctgcccacctctgcctcccaaagtgctgggattacaaacatgagccaccatgcctagccTCTCCCTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 79943 385 + 73212453 GGTGGGGCCTGTGCAGGCTTTGAACCGCACACCACACTGTCTCCCCTACCTGCCACAGAAGTTTTCtctttacttttttttttttttttttttttgagacagggtcttgctctgtcacccaggatggagtgcagtggcacaatcggctcactgcagccctcacctcctcaagctcaggagatcctcccacctcaccctcccgagtagctgggactataggtggtgtgcaccactacacccagctaatttttgtattttttgtagaaatggggttttaccatgttgctcaggctggtctccaactcctgggctcaagcaatcggcccacctcagcctcccaaagtgctgggattacaaacatgagccaccacgcctagccTCTCCC--- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 114104 370 + 80904711 GGCGAGGCCTGTACAGGCTTTGAACCGCACACCGCACTGTCTCCCCCACCCGCCACGACTGCtttctct----tttttatttttatttttattttgagaccaggtctcgctctgtcacccaggctggagtgcagtggtgcgatcggctcgccgcagccttccccgccccaggctcaggggatcctcccacctcaccctcctgaggagctgggactgtaggtggtgcgtgccaacacacccagctaa-ctttgtattgtttgtagagatggggtttcaccatgttgcccaggctggtctcaaactcctgggctcaagccatctgcccacctcagcctcccaaagtgctgggattacaagcatg-------------agccTCTCCCTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 119850 364 + 80997621 GGCGAGGCCTGTACAGGCTTTGAACCGCACACCACACTGTCTCCCCCACCCGCCACGGAAGCtttctct----------tatttatttttattttgagaccgggtctcgctctgtcacccaggctggagtgcagtggtgcgattggctcgccgcagccttccccgccccaggctcaggggatcctcccacctcaccctcctgaggagctgggactgtaggtggtgcgcaccaacacacccagctaa-ctttgtattgtttgtagagatggggtttcaccatgctgcccaggctggtctcaaactcctaggctcaagccatctgcccacctcagcctcccaaagtgctgggattacaagcatg-------------agccTCTCCCTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 118424 370 + 74645514 GGCGAGGCCTGTGCAGGCTTTGAACCGCACACCGCACTGTCTCCCCCACCCGCCACGgaagctttctct----tttttatttttatttttattttgagaccgggtcttgctctgtcacccaggctggagtgcagtggtgcgatcggcTCGCCGCAGCCTTCCCCGCcccaggctcaggggatcctcccacctcaccctcctgaggagctgggactgtaggtggtgcgcgccaacacacccagctaa-ctttgtattgtttgtagagatggggttttaccatgttgcccaggctggtctcaaactcctgggctcaagcaatctgcccgcctcagcctcccaaagtgctgggattacaagcatg-------------agcctctCCCttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 106938 364 + 75148670 GGCGAGGCCTGTGCAGGCTTTGAACCACACACCGCACTGTCTCCCCCACCCGCCACGGAAGCtttctct----------ttcttatttttattttgagaccgggtcttgctctgtcacccaggctggagtgcagtggtgcgatcggctcgctgcagccttccccgccccaggctcaggggatcctcccacctcaccctcctgaggagctgggactgtaggtggtgcgcaccaacacacccagctaa-ctttgtattttttgtagagatggggttttaccatgttgctcaggctggtctcaaactcctgggctcaagcaatctgcccacctcagcctcccaaagtgctgggattacaagcatg-------------agccTCTCCCTTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 923235 382 - 1291538 GTCGGGGCCTGCGCAGGCTTCGAACCGCACACCACACTGTCTCCCCCACTTGCCACAGAAGCTttctcttt--tttgctttttttttttttttttgagacagggtcttgctctgtcacccaggctggagtgcaatggcgcaattggctcactgcagccttcacctccctaggctcaagtgatcctcccacgtcagcctcctgagtagctgggtctataggtggtgtgcac---tgcatttttgtat-ttttctaaattttgtagagatggggtttcaccctgttgctcaggctggtctcaaattcctgggcacaagcaatctgcccacttcagcctctcaaaatgctgggattacaaacatgagccaccacgcctggccTCCCCCCAA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15681444 17 - 61074082 I e nomLeu3.chr19 205947 917 - 81552678 M a score=387018.000000 s hg38.chr17_GL383563v3_alt 203792 166 + 375691 ------TTTTATTTTCCTGAAAAATACATACCTAGCATACAAAATTAGCAC---AACAAAAAAGTAAAATGAAACTAGGCCACCTATAACATCACTGCACAGAGAC-GCCCTGCCGACCATGGCGGTGTGAATTTTCTTACACCATTGCCTGGGAAAACACACTATTTGT-TTTTTG- s panTro4.chr17 192618 167 + 82630442 ------TTTTATTTTCCTGAAAAATACATACCTAGCATACAAAATTAGCAC---AACAAAAAAGTGAAATGAAACTAGGCCACCTATCACATCACTGCACAGAGACAGCCCTGCTGACCATGGCGGTGTGAATTTTCTTATACCCTTGCCTGGGAAAACACACTATTTGT-TTTTTG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80328 170 + 73212453 -------TTTATTTTCCTGAAAAATACATACCTAGCATACAAAATTAGCACAATAACAAAAAAGTAAAATGAAACTAGGCCACCTATAACATCACTGCATGGAGACAGCCCTGCTGAGCATGGCGGAGTGAATTTTCTTACACCCTTGCCTGGGCAAACACACTATTTGT-TTTTTGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 206889 166 - 81552678 ------TTCTATTTTCCTGAAAAATACATACCTAGCATACAAAATAAGCACAATAACAAAAAGGTAAAATGAAACTAGGCCACCTATAACATCACTGCACAGAGGCAGCCCTGCTGAGCATGGCGGTGTGGATTTTCTTACGCCCTCGCCTGGGCCAACACAC----TGG-TTTCTG- i nomLeu3.chr19 M 917 C 0 s rheMac3.chr16 114474 158 + 80904711 ------TTTTATCTTCCTGAAAAATACATACCTAGCACACAAAATGAGCACAATAACAAAAAAGCAAAATGAAACTAGGCCACCTATTACATCACTGCCCACAGACAGCCCTGCGGAGTGTGGCGGTGGGAAGTTCCTCACACCCTGG-CTGGGCAAAC------------TGTTTG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 120214 162 + 80997621 ------TTTTATCTTCCTGAAAAATACATACCTAGCACACAAAATGAGCACAATAACAAAAAAGCAAAATGAAACTAGGCCACCTATTACATCACTGCCCACAGACAGCCCTGCGGAGTGTGGCGGTGGGAAGTTCCTCACACCCTGG-CTGGGCAAAC--------TGTTTGTTTG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 118794 158 + 74645514 ------ttttATCTTCCTGAAAAATACATACCTAGCACACAAAATGAGcacaataacaaaaaagcaaaatgaaactaGGCCACCTATTACATCACTGCACACAGACAGCCCTGCGGAGCGTGGCGGTGGGAAGTTCCTCACACCCTGG-CTGGGcaaac------------tgtttg- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 107302 158 + 75148670 ------TTTTATCTTCCTGAAAAATACATACCTAGCACACACAATGAACACAATAACAAAAAAGCAAAATGAAACTAGGCCACCTATTACATCACCGCACACAGACAGCCCTGCGGAGCGTGGCGGTGGGAAGTTCCTCACACCCTGG-CTGGGCAAAC------------TGTTTG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 923617 176 - 1291538 TAACCGCGTCTTTTTCCTGAAAAATACCTACCTAGCATACAAAATTAGCACAATAACAAAAGAGTAAAATGAAACTAGGTCACCTATAATGTTACCGCACAGAGCCAGCCCTGCTGAGCATGGCTGCGTGGACTTTCTTTCGCTCTTTCCCAGGCACACGCACTAtttgt-ttttcg- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15681444 17 - 61074082 I a score=23799.000000 s hg38.chr17_GL383563v3_alt 203958 7 + 375691 TTTTTTT s panTro4.chr17 192785 7 + 82630442 TTTTTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80498 7 + 73212453 TTTTTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207055 7 - 81552678 TTTTTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 114632 7 + 80904711 TTTGTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 120376 7 + 80997621 TTTGTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 118952 7 + 74645514 tttgttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 107460 7 + 75148670 TTTGTTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 923793 7 - 1291538 ttttttt i calJac3.chrUn_GL286409 C 0 I 20 s canFam3.chr9 15681461 7 - 61074082 ttttttt i canFam3.chr9 I 17 C 0 e mm10.chr11 75856895 752 + 122082543 I a score=366286.000000 s hg38.chr17_GL383563v3_alt 203965 166 + 375691 GAAAACTAGGCTAATGTAGATGCAACCTGTTCCCACCCTGTCCCCCAACACCTCACTACGCATCAGAGCAGTCGTTCCGAACTCATAACT--------TCTCCATCATCGTT-TTTCACTGCTCCACAGTTTGGATTTATTAAACTTAAGTAATCCAGCACCTCACCGAGGGACA s panTro4.chr17 192792 166 + 82630442 GAAAACTAGGCTAATGTAGATGCAACCTGTTCCCACCCTCCCCCCCAACACCTCACTACGCATCAGAGCAGTCGTTCCGAATTCATAACT--------Tctccatcatcgtt-tttcactgctccacagtttggatttattaaacttaattaatccagcacctcaccgagggaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80505 165 + 73212453 GGAAACTAGGCTAATGTAGAGGCAACCTGTTCCCACCCT-CCCCCCAACACCTCACTACACATCAGAACAGTCGTTCCAAATTCATAACT--------TCTCCATcatcatt-tttaattgctccacagtttggatttattaaacttaattaatccagcgccccactgagggaca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207062 159 - 81552678 GAAAACTAGGCTAATGTAGATGCAACCTGTTCCCACCCT--CCCCCAACACCTAACTGCCCATCATAGCAGTCGCTGCGTATTCACAACT--------TCTCCATCGTCATT-TTTAATTGCTCCACAGTTTGGATTTATTAAACTTAATTAATCCAGCGCCCCACCGAG----- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 114639 160 + 80904711 GAAAACTGGGCTAATGTAGATGCCACCTGCTCCCGC-----CCCTCAACACCTGACTACACATCAC-TCCGTCCCTCCGGATTCATAATT--------TCTCCATCATCATT-TCTAATTGTTCCACAGTTTGAATTTATTAAACTTAATTAATCCAGCGCCCCACCGAGGGACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 120383 160 + 80997621 GAAAACTGGGCTAATGTAGATGCCACCTGCTCCCGC-----CCCTCAACACCTGACTACACATCAC-GCCGTCGCTCCGGATTCATAATT--------TCTCCATCATCATT-TCTAATTGTTCCACAGTGTGACTTTATTAAACTTAATTAATCCAGCGCCCCACCGAGGGACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 118959 160 + 74645514 gaaaactGGGCTAATGTAGATGCCACCTGCTCCCGC-----CCCTCAACACCTGACTACACATCAC-GCCATCGCTCCGGATTCATAATT--------TCTCCatcatcatt-tctaattgttCCACAGTTTGGATTTATTAAACTTAATTAATCCAGCGCCCCACCAAGGGACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 107467 160 + 75148670 GAAAACTGGGCTAATGTAGACGCAACCTGTTCCCGC-----CCCTCAACACCTGACGACACATCAC-GCCGTCGCTCCGGATTCATAATT--------TCTCCATCATCATT-TCTCATTGTTCCACAGTTTGGATTCATTAAACTTAATTAATCCAGTGCCCCACCGAGGGACA i chlSab2.chr16 C 0 I 153 s canFam3.chr9 15681468 162 - 61074082 gaa-----ggatcatgtagatgcaacctgtgtttgc-----ctct---ctcctaactatgtatcacagcaactgttttgtgttaataagtaatggtggtctccactgccattatttaatagcttcattgtttggacttattaaacttaattaaaccagccctccactcatagata i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=10728.000000 s hg38.chr17_GL383563v3_alt 204131 13 + 375691 -----TTTGTTTCCAATC- s panTro4.chr17 192958 13 + 82630442 -----tttgtttccaatc- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80670 13 + 73212453 -----tttgtttccaatc- i ponAbe2.chr17 C 0 I 1 s nomLeu3.chr19 207221 3 - 81552678 ---------------ATC- i nomLeu3.chr19 C 0 I 1 s rheMac3.chr16 114799 13 + 80904711 -----TGTGTTTCCAATC- i rheMac3.chr16 C 0 I 396 s macFas5.chr16 120543 13 + 80997621 -----TGTGTTTCCAATC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 119119 13 + 74645514 -----CGTGTTTCCAATC- i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15681630 19 - 61074082 tttaagttgcttccagatt i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107627 153 + 75148670 I a score=8584.000000 s hg38.chr17_GL383563v3_alt 204144 10 + 375691 CTCG-TCCTCA s panTro4.chr17 192971 10 + 82630442 ctcg-ttctca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80684 10 + 73212453 ctca-tcctca i ponAbe2.chr17 I 1 C 0 s nomLeu3.chr19 207225 10 - 81552678 CTCG-TCCTCA i nomLeu3.chr19 I 1 C 0 s macFas5.chr16 120556 10 + 80997621 -TCATTCCTCA i macFas5.chr16 C 0 I 441 s papAnu2.chr16 119132 10 + 74645514 -TCATTCCTca i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15681649 10 - 61074082 atca-ctcttg i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107627 153 + 75148670 I e rheMac3.chr16 114812 396 + 80904711 I a score=845.000000 s hg38.chr17_GL383563v3_alt 204154 1 + 375691 C s panTro4.chr17 192981 1 + 82630442 c i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80694 1 + 73212453 c i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207235 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 119142 1 + 74645514 c i papAnu2.chr16 C 0 I 328 s canFam3.chr9 15681659 1 - 61074082 t i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107627 153 + 75148670 I e rheMac3.chr16 114812 396 + 80904711 I e macFas5.chr16 120566 441 + 80997621 I a score=3700.000000 s hg38.chr17_GL383563v3_alt 204155 6 + 375691 GGGCAG s panTro4.chr17 192982 6 + 82630442 gggcag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80695 6 + 73212453 gggcag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207236 5 - 81552678 -GGCAG i nomLeu3.chr19 C 0 C 0 s canFam3.chr9 15681660 6 - 61074082 taacag i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107627 153 + 75148670 I e papAnu2.chr16 119143 328 + 74645514 I e rheMac3.chr16 114812 396 + 80904711 I e macFas5.chr16 120566 441 + 80997621 I a score=1815.000000 s hg38.chr17_GL383563v3_alt 204161 2 + 375691 CG s panTro4.chr17 192988 2 + 82630442 cg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80701 2 + 73212453 cg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207241 2 - 81552678 CA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 121007 2 + 80997621 CA i macFas5.chr16 I 441 C 0 s papAnu2.chr16 119471 2 + 74645514 ca i papAnu2.chr16 I 328 C 0 s canFam3.chr9 15681666 2 - 61074082 tg i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107627 153 + 75148670 I e rheMac3.chr16 114812 396 + 80904711 I a score=21122.000000 s hg38.chr17_GL383563v3_alt 204163 13 + 375691 CCGCAGCCATCAC s panTro4.chr17 192990 13 + 82630442 ccgcagccatcac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80703 13 + 73212453 ccgcagccatcac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207243 13 - 81552678 CCGCAGCCATCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 115208 13 + 80904711 CCGCGGCCGTCAG i rheMac3.chr16 I 396 C 0 s macFas5.chr16 121009 13 + 80997621 CCGCGGCCATCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 119473 12 + 74645514 ccgCTGCCATCA- i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15681668 13 - 61074082 ctgcaacgatcgt i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107627 153 + 75148670 I a score=97048.000000 s hg38.chr17_GL383563v3_alt 204176 50 + 375691 -CCCGCACCCACCCCATCAGCCCAGTGCTCGGTTA--TTGCCT---TAGGAAAGAc s panTro4.chr17 193003 50 + 82630442 -cccacacccaccccatcggcccagtggtcagtta--ttgcct---taggaaagac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80716 50 + 73212453 -cctgcacccaccgcatcagcccagttgtcggtta--ttgcct---taggaaagac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207256 52 - 81552678 -CCTGCACCCACCGCATCAGCCCAGTTGCCGGTTATTTTGCCT---TAGGAAAGAc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 115221 51 + 80904711 -CCTGTACCCACCGCATCGGGCCAGTTTTCGGTCA--TTGCCCT--TAGGAAATGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 121022 51 + 80997621 -CCTGTACCCACCGCATCGGGCCAGTTTTCGGTCA--TTGCCCT--TAGGAAATGc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 119485 51 + 74645514 -CCCGTACCCACCGCATCGGGCCAGTTTTCAGTTA--TTGCCCT--TAGGAAATGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 107780 53 + 75148670 -CCCGTACCCACCGCATCGGGCCAGTTGTCGGTTA--TTGCCTTAGTAGGAAACGT i chlSab2.chr16 I 153 C 0 s canFam3.chr9 15681681 47 - 61074082 cttagcacaca---catcaga-caggtgtcagttt--cggcct---tagaaaacac i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=262849.000000 s hg38.chr17_GL383563v3_alt 204226 117 + 375691 gggttgattttgcccttttccaaaatgcttgggacagaagtgcttcagattttgaatttttccgaattttagaatatttgcattatacgtaaccagttcagcatcccaaatctgaaa s panTro4.chr17 193053 117 + 82630442 gggttgattttgcccttttccaaaatgcttgggacagaagtgcttcagattttgaatttttccgaattttagaatatttgcattatacttaaccagttcagcatcccaaatctgaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80766 117 + 73212453 gggttgattttgcccttttccaaaatgcttgggacagaggtgcttcagattttgatttttttcgaattttagaatatttgcattatacttaaccagttcagcatcccaaatctgaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207308 117 - 81552678 gggttgattttacccttttccaaaatgcttgggacagaagtgcttcagattttgaatttttttgaattttagaatatttgcattatacttaaccagttcagcatcccaaatctgaaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 115272 117 + 80904711 GGGATGATTTTGcccttttccaaaatgcttgggacagaagtgcttctgattttgacttttttcgaattttagaataattgcatcatacttaaccagttcagcatccgaaatctgaaa i rheMac3.chr16 C 0 I 35 s macFas5.chr16 121073 117 + 80997621 aggatgattttgcccttttccaaaatgcttgggacagaagtgcttctgattttgacttttttcgaattttacaataattgcatcatacttaaccagttcagcatccgaaatctgaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 119536 106 + 74645514 GGGATTATTTTGCCcttttccaaaatgcttgggacagAAGTCCTtctgattttgacttttttcGAATTTTAGGATAATTGCATTATACTTAACCAGTTCAgcatct----------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 107833 117 + 75148670 GGGATGATTTTGcccttttccaaaatgcttgggacagaagtgcttccaattttgacttttttcgaattttagaataattgcattatatttaaccagttcagcatccgaaatctgaaa i chlSab2.chr16 C 0 I 37 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15681728 0 - 61074082 C e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=8878.000000 s hg38.chr17_GL383563v3_alt 204343 20 + 375691 atcc-----------------aaaatctgaaatgctc s panTro4.chr17 193170 20 + 82630442 atcc-----------------aaaatctgaaatgctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80883 20 + 73212453 atcc-----------------aacatctgaaatgctc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207425 20 - 81552678 atcc-----------------aaaatctgaaatgctc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 121190 34 + 80997621 -tactccaatgagcatttcttgaagcatcatacac-- i macFas5.chr16 C 0 I 1 s papAnu2.chr16 119642 16 + 74645514 ---------------------gaaatctgaaatgctc i papAnu2.chr16 C 0 I 30 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15681728 0 - 61074082 C e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107950 37 + 75148670 I e rheMac3.chr16 115389 35 + 80904711 I a score=3855.000000 s hg38.chr17_GL383563v3_alt 204363 4 + 375691 cagt s panTro4.chr17 193190 4 + 82630442 cagt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80903 4 + 73212453 cagt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207445 4 - 81552678 cagt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 115424 4 + 80904711 caaa i rheMac3.chr16 I 35 C 0 s macFas5.chr16 121225 4 + 80997621 caaa i macFas5.chr16 I 1 C 0 s papAnu2.chr16 119688 4 + 74645514 CAAa i papAnu2.chr16 I 30 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15681728 0 - 61074082 C e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 107950 37 + 75148670 I a score=151587.000000 s hg38.chr17_GL383563v3_alt 204367 62 + 375691 gagttttggattttggagcatttcagctttgggttttctgatgaatgatactcagcctATAT s panTro4.chr17 193194 62 + 82630442 gagttttggattttggagcatttcagctttgggttttctgatgaatgatactcagcctatat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80907 62 + 73212453 gagttttggattttggagcatttcagctttgggttttctgattaatgatactcagcctttat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207449 62 - 81552678 gagttttggattttggagcatttcagctttgggttttctgattaatgacactcagcctATAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 115428 62 + 80904711 gagttttagattttggagcatttcagccttgggttttctgattaatgatactcagcctgTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 121229 62 + 80997621 gagttttagattttggagcatttcagccttgggttttctgattaatgatactcagcctgTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 119692 62 + 74645514 gagttttagattttggagcatttcagccTTGGGTTTTCTGATTAATGATACTCAGCCTGTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 107987 62 + 75148670 gagttttagattttggagcatttcagctttgggttttctgattaatgatactcagcctgTGT i chlSab2.chr16 I 37 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15681728 0 - 61074082 C e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=372738.000000 s hg38.chr17_GL383563v3_alt 204429 147 + 375691 TCCACAGAGCGGGACTGCAGGGTCGAGAAC--TGTGTGTTTGGATGATGACATAGA--GTCAGGCCGCCCTCCAGGAGGAAAAGCCACATTCCCAGGAGGCTACAGTAAGTGTTTTTGGGGTGGGGACCTCGGCTTACACTTCCTGGTGGA s panTro4.chr17 193256 147 + 82630442 tccacagagcgggattgcagggtcgagaac--tgtgtgtttggatgatgacataga--gtcaggccgccctccaGGAGGAAAAGCCACATTCCCAGGAGGCTACAGTAAGTGTTTTTGGGGTGGGGACCTCGACTTACACTTCCTGGTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 80969 147 + 73212453 tccacagagcgggattgcagggtcgagaac--tgtgtgtttggacgatgacataga--gtcaggccgccctccaggaggAAAAGCCACATTCCCAGGAAGCTACAGTAAGTGTTTTCGGGGTGGGGACCTCGGCTTACGCTCCCTGGTGAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207511 147 - 81552678 TCCACAGAGCGGGATTGCAGGGTCGAGAAC--TGTGTGTTTGGATGATGACATAGA--GTCAGGCCACCCTCCAGGAGTAAAAGCCACATTCCCAGGAGGCTACAGTAAGTGTTTTCGGGGTGGGGACCTCGGCTTACGCTTCCTGGTAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 115490 147 + 80904711 TCCACAGAGCGGGATGGCAGGGTCGAGAACTGTGTGTGTTCAGATGATGACAC--G--GTCAGGCCACCCTCCAGGAGGAAACGCCACATTCCCAGGAGGCCCCAGTGAGTGTTTTCAGGGTGGGGACCTCAGCGTATGCTCCCTGGCGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 121291 147 + 80997621 TCCACAGAGCGGGATGGCAGGGTCGAGAACTGTGTGTGTTCAGATGATGACAC--G--GTCAGGCCACCCTCCAGGAGGAAACGCCACATTCTCAGGAGGCCCCAGTGAGTGTTTTCAGGGTGGGGACCTCAGCGTACGCTCCCTGGCAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 119754 147 + 74645514 TCCACAGAGCGGGATGGCAGGGTCGAGAACTGTGTGTGTTCAGATGACGACAC--G--GTCAGGCCACCCTCCAGGAGGAAACGCCACATTCCCAGGAGGCCCCAGTGAGTGTTTTCAGGGTGGGGACCTCAGCGTACGCTCCCTGGTGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108049 149 + 75148670 TCCACAGAGCGGGACGGCAGGGTCGAGAACTGTGTGTGTTCGGATGATGACACAGA--GTCAGGCCACCCTCCAGGAGGAAACGCCACGTTCCCAGGAGGCCCCAGTGAGTGTTTTCAGGGTGGGGACCTCAGCGTACATTCCCTGGTGGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15681728 149 - 61074082 tccaaggggcggatctgccaggtcaagagatgtgtatatttagatgatgacatatatcatcagaccaccctccaggaagAAAAGTTGAATATCCAGTGAAGTGC--TAAGCGTCTTCAAGGTGGGAAGCCCACACTACACTTCCTGGTGGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=995452.000000 s hg38.chr17_GL383563v3_alt 204576 597 + 375691 ATCCAAGGCCTCCTCTGTGGACCCTGATCGGGGAAGGTTCCCAGGGAACCACGGTGGGCTTGGGGAGAGGCATCCATCAGGGCATGAGGCCACCAGAGTGAGG-GGCGTGGGGCGAACAATGGAGCTACCCTGCCATCCCTAGGACAGGCCTTGGGGGCTGAGA--GTGCT-CCCCCACCTCACGCCCAGCCAGTCA-AGGCCCTGTTTAACGGGGAGTGGCCAGGTTGATGCTCAGGGTGACTTGGCAATGTGGCCAAGCCATCTCTGTCGTGAGTC-TTCAGGGGAAGAGACTAAGACACCCCACAGAGCTGCATTCCCGCACACTGTGG-GGCCGAGAACCTCATCTGTGC-CAGTGAGTCCTCAGCTCATGGACTTCCGAGCTGCTCCTTTGCGGCACCGGACCACGGTTTTGGCCTCCGGGTATGCGTGATCC---------TTTTTTAAAAAAATTAAAAAT---GTTTCCATTGTATTAAAGTATTCATAACATCAAACGTATCACCTGAA---------------------------------------------gtgcaacccatctccagaa--------cttgccaaactgaaactctataaccactaagcaatagctctcctctgccctg----------gcccctggccacc-ccagtctgctgtctg s panTro4.chr17 193403 597 + 82630442 ATCCAAGGCCTCCTCTGTGGACCCTGATCGGGGAAGGTTCCCAGGGAACCACGGTGGGCTTGGGGAGAGGCATCCATCAGGGCATGAGGCCACCAGAGTGAGG-GGCGTGGGGCAAACAATGGAGCTACCCTGCCATCCCTAGGACAGGCCTTGGGGGCTGAGA--GTGCT-CCCCCACCTCACGCCCAGACAATCA-AGGCCCTGTTTAACGGGGAGTGGGCAGGTTGATGCTCAGGGTGACTTGGCAATGTGGCCAAGCCATCTCTGTTGTGAGGC-TTCAGGGGAAGAGACTAAGACACCCCACAGAGCTGCATTCCCGCACACTGTGG-GGCTGAGAACCTCATCTGTGC-CAGTGAGTCCTCAGCTCACGGACGTCTGAGCTGCTCCTTTGCCGCACCGGACCATGGTTTTGGCCTCCGGGTATGCGCGATCC---------ttttttaaaaaaattaaaaat---GTTTCCATTGTATTAAGGTATTCgtaacatcaaacgtatcaccttaa---------------------------------------------gtgcaacccgtctccagaa--------cttgcaaaactgaaactctacaaccactaagcaatagctctcctctgccctg----------gcccctggccacc-ccagtctgctgtctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81116 583 + 73212453 ATCCAAGGCCCCCTCTATGGACCCTGATTGGGGAAGGTTCCCACGGAACCACAGTGGGCTTGGGGAGAGGCATCTGTCAGGGCATGAGGCCACCAGAGTGAGG-GGCGTGGGGCGAACCATGGAGCTGCCCTGCCATCCCTAGGACAGGCCTTGGGAGCTGAGA--GAGCT-CCCCCACCTCACGCCCAGCCAGTCA-AGGCCCTGTTTAATGGGGAGTGGGCAGGTTGATGCTCAGGGTGACTTGGCAA----------------------TGAGGC-TTCAGGGGAAGATACTAAGATGCCCCACAGAGCTGCATTCCCACACACTGTGG-GGCCGAGCAGCTCATCTGTGC-CAGTGAGTCCTCATCTCACGGACTTCTGAGCTTCTCCTTTGCAGCACCGGACCACAGTTTAGGCCTCTGGGTATGCGTGGCCC---------TTTTTTAAAaaaatttaaaat---gtttccattgtgttaaagtattcataacataaaatgtatcaccttaa---------------------------------------------gtgcaacccatctccagaactcttcatcttgcaaaactgaaactctataaccgctaagcaatagctctccgctgtcctg----------gcccctggccacc-cctgtcggctgtctg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 115637 600 + 80904711 ATCCAAGGCCTCCTCTGTGGACCCCGATGGGGGACGTTTCCCACGGAACCATGGTGGGCCTGGGGCGAGGTGTCCGTCAGGACGTGAGGTCACCGGAGTGATG-GGCGCAGGGCGAACAATGGAGCTGCCCTACCACCTCTAGGACAGGCCTCGGG-GCGGAGG--GCGCTGCCCCCACCTCACACCCAGCCAGTCA-AGG--CTGTTTAATGGGGAGCTGGCAGGTTGATGCTCAGGGTGACGTGGCAACGTGGCCGAGCCATCTCTGTTGTGAGGC-GTCAGGGGAAGAGACTAAGAAGCCC--CAGAGCTGCATTCCCGCACACTGTAACCTCCTGTAACCTCATCAGTGC-CAGCGTGTCCTCACCTCACGGCCTTCTGGGCTTCTCCTTTGTAGCCATGGACCACGGGTTTGGCCTCTGGGTGTGCATGGTcc----------tttttaaaaacattttaaat---gttttcattatgttaaaatattcataacataaaatgtatcaccctaa---------------------------------------------gtgcaatccgtctccagaactcttcatcttgcaaaactgaaactctgtaaccactaagcagtagctctccgccgccctg----------gg-cctggccacc-ccagtctgctgtctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 121438 600 + 80997621 ATCCAAGGCCTCCTCTGTGGACCCCGATGGGGGACGTTTCCCACGGAACCATGGTGGGCCTGGGGCGAGGTGTCCGTCAGGACGTGAGGTCACCGGAGTGACG-GGCGCAGGGCGAACAATGGAGCTGCCCTACCACCTCTAGGACAGGCCTCGGG-GCGGAGG--GCGCTGCCCCCACCTCACGCCCAGCCAGTCA-AGG--CTGTTTAATGGGGAGCTGGCAGGTTGATGCTCAGGGTGACGTGGCAACGTGGCCGAGCCATCTCTGTTGTGAGGC-GTCAGGGGAAGAGACTAAGAAGCCC--CAGAGCTGCATTCCCGCACACTGTAACCTCCTGTAACCTCATCGGTGC-CAGCGTGTCCTCACCTCACGGCCTTCTGGGCTTCTCCTTTGTAGCCATGGACCACGGGTTTGGCCTCTGGGTATGCATGGTcc----------tttttaaaaacattttaaat---gttttcattatgttaaaatattcataacataaaatgtatcaccctaa---------------------------------------------gtgcaatccgtctccagaactcttcatcttgcaaaactgaaactctgtaaccactaagcagtagctctctgctgccctg----------gg-cctggccacc-gcagtctgctgtctg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 119901 604 + 74645514 ATCCAAGGCCTCCTCTGTGGA-CCTGATCGGGGGCGGTTCCCACGGAACCATGGTGGGCCTGGGGCGAGGTGTCCGTCAGGACGTGAGGTCACCGGAGTGACG-GGCGCAGGGCGAACAATGGAGCTGCCCTACCACCTCTAGGACAGGCCTCGGG-GCTGAGGGTGCGCTGCCTCCACCTCACGCCCAGCCAGTCA-AGGCTCTGTTTAATGGGGAGCGGGCAGGTTAATGCTCAGGGTGACGCGGCAACGTGGCCGAGCCATCTCTGTTGTGAGGC-GTCAGGGGAAGAGACTAAGAAGCCC--CAGAGCTGCATTCCCACACACTGTAACCTCCTGTAACCTCATCAGTGC-CAGTGAGTCCTCATCTCACGGCCTTCTGGGCTTCTCCTTTGTAGCCGTGGACCACGGGTTTGGCCTCTGGGTGTGCAtgatcc----------tttttaaaaacattttaaat---gttttcattgtgttaaaatattcataacataaaatgtatcaccCTAA---------------------------------------------GTGCAATCCGTCTCCAGgactcttcatcttgcaaaactgaaactctgtaacCACTAAGCAGTAGCTCTCTGCCGCCCTG----------GGCCCTGGCCACC-CCAGTCTGCTGTCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108198 600 + 75148670 ATCCAAGGCCTTCTCTGTGGACCCCGATGGGGGGCGGTTCCCACAGAACCACGGTGGGCCTGGGGAGAGGTGTCCGTCAGGACGTGAGGTCACCGGAGTGAC--GGCGCAGGGCGAACAACGGAGCTGCCCTACCACCTCTAGGACAGGCCTCGGG-GCTGAGA--GCGCTGCCCTCACCTCACGCCCAGCCAGTCA-AGGCTCTGTTTAATGGGGAGCCGGCAGATTGATGCTCAGGGTGACGTGGCAACGTGGCCGAGCCATCTCTGTCGTGAGGC-GTCAGGGGAAAGGACTAAGAAGCCC--CAGAGCTGCATTCCCGCACACTGTAACCTCCCGTAACCTCATCGGTGC-CAGCGAGTCCTCACCTCACGGCCTTCTGGGCTTCTCCTTTGTAGCCATGGACCACGGGTTTGGCCTCTGGGTGTGCATGGTCC----------TTTTtaaaaacattttaaat---gttttcattgtgttaaaatattcataacacaaaacgtatcaccctaa---------------------------------------------gtgcaat-cgtctccagaactcttcatcttgcaaaactgaaactctgtaaccactaagcagtagctctccgccgccctg----------gc-cccggccacc-ccagtctgctgtctg i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15681877 631 - 61074082 ATCTAGGGTCTGGCCTTGGGGCCCTGCTCAGGAGCAGTTCCCATGGG---CTGTTGGGTGTGGGGA-AGGTGCTTGTTAGGACCCAAGGCCACCAGAGTTAAGTGCCATAGCAGGGAGGATGGGG--ACCCCACTGTCCCCA------TCCTGGGG-ATGGGGC--ACACT----------------------GTCACATGTGCTGTTTGAAGGGGAGTGGGCAGGACAATATCAAGGGTGACTCAATGAGATGTAAACTACATCACTGTTATGTGGCTTTCAGTGGGAGAGACCAAGAAATGCTATAGAGCTGCATTCGGGGGTTCCACAG-GGCCAGACACATCACTGATCCTCCTTAAGGCCTCATCT--TGGGCTCCTGGGCAGTTCCTGCCGAGCTG-GGACAACAGTTCTGGTCTATGTGTGTGCATAGTCCTTTCTTTCCTTTTTTGTTTTCAATTAAAATTAAGttttaatagca-gaaaatatccataacataaaatttaccatcttagctatctctaggtatatagttcagtagtgttaaacacactcatgttgtacacccagtctctagaacttcc---tttgtaaaac--agaccctgcacccattaaacaat---tctctattcctctgtaccccgccagcccctgacagccaccattctactttctg i canFam3.chr9 C 0 I 15 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e nomLeu3.chr19 207658 0 - 81552678 C a score=-657.000000 s hg38.chr17_GL383563v3_alt 205173 1 + 375691 t s panTro4.chr17 194000 1 + 82630442 t i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81699 1 + 73212453 t i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 116237 1 + 80904711 a i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122038 1 + 80997621 a i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120505 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108798 1 + 75148670 a i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e nomLeu3.chr19 207658 0 - 81552678 C a score=2892.000000 s hg38.chr17_GL383563v3_alt 205174 5 + 375691 cccta s panTro4.chr17 194001 5 + 82630442 cccta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81700 5 + 73212453 cccta i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 120506 5 + 74645514 CCCTA i papAnu2.chr16 C 0 T 10 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C a score=10732.000000 s hg38.chr17_GL383563v3_alt 205179 47 + 375691 ggaacgtgactaccctacgtacttcctatgaggggagccgcacggcg s panTro4.chr17 194006 47 + 82630442 ggaatgtgactactctacgtacttcctataaggggagtcgcacggca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81705 47 + 73212453 ggaatatgactaccctacatactttctacaaggggagccacacggtg i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120511 10 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C a score=741.000000 s hg38.chr17_GL383563v3_alt 205226 10 + 375691 tctgtcctgt s panTro4.chr17 194053 10 + 82630442 tctgtccttt i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120511 10 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=29139.000000 s hg38.chr17_GL383563v3_alt 205236 135 + 375691 tccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctgttCCATCCCTAGGAACGTGACTACCCTACGCACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s panTro4.chr17 194063 135 + 82630442 tccatccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcatctgtccttttccatccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtcctttt i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 10 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=382.000000 s hg38.chr17_GL383563v3_alt 205371 4 + 375691 ccat s panTro4.chr17 194198 4 + 82630442 ccat i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=29477.000000 s hg38.chr17_GL383563v3_alt 205375 133 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccg s panTro4.chr17 194202 133 + 82630442 ccctaggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccatccctaggaatgtgactactctacgtacttcctataaggggagtcgcacggcatctgtccttttcca i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=13722.000000 s hg38.chr17_GL383563v3_alt 205508 64 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctgtt s panTro4.chr17 194335 64 + 82630442 tccctaggaatgtcactaccctacgtacttcctataaggcgagtcgcacggcatctgtcctttt i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120572 64 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=382.000000 s hg38.chr17_GL383563v3_alt 205572 4 + 375691 CCAT s panTro4.chr17 194399 4 + 82630442 ccat i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=29712.000000 s hg38.chr17_GL383563v3_alt 205576 133 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccg s panTro4.chr17 194403 133 + 82630442 ccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtccttttccatccctaggaatgtgactactctacgtacttcctataaggggagctgcacggcatctgtccttttcca i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 130 T 138 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=5225.000000 s hg38.chr17_GL383563v3_alt 205709 63 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt s panTro4.chr17 194536 63 + 82630442 tccctaggattgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtccttt i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 138 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=28980.000000 s hg38.chr17_GL383563v3_alt 205772 138 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccg s panTro4.chr17 194599 138 + 82630442 tccatccctaggaatgtgactaccctacgtacttcctataaggggagctgcagggcatctgtccttttccatccctaggaatgtcactactctacgtacttcctataaggcgagtcgcacggcatctgtccttttcca i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120501 138 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 138 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=14434.000000 s hg38.chr17_GL383563v3_alt 205910 64 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctgtt s panTro4.chr17 194737 64 + 82630442 tccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtcctttt i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120572 64 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=177.000000 s hg38.chr17_GL383563v3_alt 205974 4 + 375691 CCCT s panTro4.chr17 194801 4 + 82630442 ccat i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=29527.000000 s hg38.chr17_GL383563v3_alt 205978 130 + 375691 CCCTAGGAATGTGACTACCCTAAGTACTTCCTATGAGGGGAGCCGCACGGCATCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s panTro4.chr17 194805 130 + 82630442 ccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcatctgtccttttCCAtccctaggaatgtgactaccctatgtacttcctataaggggagctgcacggcgtctgtcctttt i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=382.000000 s hg38.chr17_GL383563v3_alt 206108 4 + 375691 CCAT s panTro4.chr17 194935 4 + 82630442 ccat i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=14296.000000 s hg38.chr17_GL383563v3_alt 206112 67 + 375691 CCCTAGGAACGTGACTACCCTACCTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s panTro4.chr17 194939 67 + 82630442 ccctaggaatgtgactaccctacgtacttcctatgaggggagctgcacagcgtctgtccttttccgt i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=13573.000000 s hg38.chr17_GL383563v3_alt 206179 63 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s panTro4.chr17 195006 63 + 82630442 ccctaggaatgtgactaccctacatatttcctataaggggagccgcacggcatctgtcctttt i panTro4.chr17 C 0 T 1069 s papAnu2.chr16 120506 63 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGT i papAnu2.chr16 T 67 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=129.000000 s hg38.chr17_GL383563v3_alt 206242 4 + 375691 CCAT s papAnu2.chr16 120569 4 + 74645514 CTGT i papAnu2.chr16 C 0 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 206246 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 206313 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 206380 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 206447 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8962.000000 s hg38.chr17_GL383563v3_alt 206514 130 + 375691 CCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 206644 71 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 206715 67 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8962.000000 s hg38.chr17_GL383563v3_alt 206782 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 206912 205 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggtgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGTCGCACGGCGTCTGTCCTtttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4069.000000 s hg38.chr17_GL383563v3_alt 207117 62 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt s papAnu2.chr16 120506 62 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTG i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9343.000000 s hg38.chr17_GL383563v3_alt 207179 135 + 375691 tCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggcgtctgtcctttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 125 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 207314 1148 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgcccttttccatccctaggaatgtgactaccctacgtgcttcctatgaggggagccgcacggtgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgagggcagccgcacggcgtctgtccttttccgtccctgggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctgggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagctgcacggcgtctgtccttttccatccctgggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccatccctgggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctg e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 125 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8531.000000 s hg38.chr17_GL383563v3_alt 208462 127 + 375691 ggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTTTT s papAnu2.chr16 120511 127 + 74645514 GGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTT i papAnu2.chr16 T 125 T 131 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 208589 6 + 375691 CCATCT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120638 131 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=7882.000000 s hg38.chr17_GL383563v3_alt 208595 130 + 375691 CTTAGGAATGTGACTACCCTACGTACTTTCTATGAGGGGAGCCGCACGGCGTCTGTCCTTtttccttccctaggaacgggactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120507 129 + 74645514 CCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCC-TTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 131 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 208725 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8788.000000 s hg38.chr17_GL383563v3_alt 208729 129 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCAATGAGGGGAGCCGCACGGCGTCTGTCCTtt s papAnu2.chr16 120506 129 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTT i papAnu2.chr16 T 130 T 134 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9221.000000 s hg38.chr17_GL383563v3_alt 208858 135 + 375691 tccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 134 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4718.000000 s hg38.chr17_GL383563v3_alt 208993 70 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccg s papAnu2.chr16 120569 70 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 138 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 209063 63 + 375691 tccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 138 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9512.000000 s hg38.chr17_GL383563v3_alt 209126 138 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGTGTCTGTCCTtttccg s papAnu2.chr16 120501 138 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 138 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4420.000000 s hg38.chr17_GL383563v3_alt 209264 63 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtctttt s papAnu2.chr16 120572 63 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTT i papAnu2.chr16 T 67 T 133 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=3910.000000 s hg38.chr17_GL383563v3_alt 209327 66 + 375691 CCGTCCCTAGGAACGGGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTT s papAnu2.chr16 120502 66 + 74645514 CTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTG i papAnu2.chr16 T 133 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9230.000000 s hg38.chr17_GL383563v3_alt 209393 135 + 375691 TCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 209528 71 + 375691 ccatccctaggaacgggactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8788.000000 s hg38.chr17_GL383563v3_alt 209599 129 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCAATGAGGGGAGCCGCACGGCGTCTGTCCTtt s papAnu2.chr16 120506 129 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTT i papAnu2.chr16 T 130 T 134 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8977.000000 s hg38.chr17_GL383563v3_alt 209728 135 + 375691 tccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 134 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4718.000000 s hg38.chr17_GL383563v3_alt 209863 70 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccg s papAnu2.chr16 120569 70 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 133 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 209933 203 + 375691 tccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACATACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTTCCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 133 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 210136 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 133 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8971.000000 s hg38.chr17_GL383563v3_alt 210203 130 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 210333 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 210400 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8840.000000 s hg38.chr17_GL383563v3_alt 210404 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 210534 339 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9093.000000 s hg38.chr17_GL383563v3_alt 210873 130 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 211003 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 211070 339 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctgggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9084.000000 s hg38.chr17_GL383563v3_alt 211409 130 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTT s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4475.000000 s hg38.chr17_GL383563v3_alt 211539 67 + 375691 CCATCCCTAGGAACGGGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTT s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 211606 67 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTT s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 57 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 211673 9 + 375691 CCATCCCTA e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 57 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4007.000000 s hg38.chr17_GL383563v3_alt 211682 60 + 375691 GAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccg s papAnu2.chr16 120579 60 + 74645514 GAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 57 T 133 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 211742 135 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGTCGCACGGTGTCTGTCCTtttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 133 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 211877 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 133 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 211944 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9206.000000 s hg38.chr17_GL383563v3_alt 212011 130 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 212141 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9572.000000 s hg38.chr17_GL383563v3_alt 212145 130 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCATCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4558.000000 s hg38.chr17_GL383563v3_alt 212275 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgccctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 212342 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9122.000000 s hg38.chr17_GL383563v3_alt 212346 133 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCG s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4764.000000 s hg38.chr17_GL383563v3_alt 212479 64 + 375691 TCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120572 64 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4718.000000 s hg38.chr17_GL383563v3_alt 212543 70 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccg s papAnu2.chr16 120569 70 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 138 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 212613 63 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctgt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 138 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9474.000000 s hg38.chr17_GL383563v3_alt 212676 135 + 375691 tctgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 138 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 212811 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9328.000000 s hg38.chr17_GL383563v3_alt 212815 130 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATAAGGGGAGCTGCACGGTGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 212945 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9337.000000 s hg38.chr17_GL383563v3_alt 212949 130 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 213079 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 213083 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9084.000000 s hg38.chr17_GL383563v3_alt 213150 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 213280 334 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggtgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagctgcacggcttctgtccttttccgtccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4548.000000 s hg38.chr17_GL383563v3_alt 213614 72 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120501 72 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 135 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9328.000000 s hg38.chr17_GL383563v3_alt 213686 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGTGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 213816 67 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 213883 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9572.000000 s hg38.chr17_GL383563v3_alt 213887 130 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCATCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4558.000000 s hg38.chr17_GL383563v3_alt 214017 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgccctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 214084 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9084.000000 s hg38.chr17_GL383563v3_alt 214088 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 214218 66 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8977.000000 s hg38.chr17_GL383563v3_alt 214284 135 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgcccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 135 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 214419 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4069.000000 s hg38.chr17_GL383563v3_alt 214423 62 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt s papAnu2.chr16 120506 62 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTG i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9230.000000 s hg38.chr17_GL383563v3_alt 214485 135 + 375691 tCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 214620 71 + 375691 ccatccctaggaacgggactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9093.000000 s hg38.chr17_GL383563v3_alt 214691 130 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTT s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 214821 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8757.000000 s hg38.chr17_GL383563v3_alt 214825 130 + 375691 CCCTAGGAACGGGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 214955 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 214959 67 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 215026 67 + 375691 CCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9206.000000 s hg38.chr17_GL383563v3_alt 215093 130 + 375691 ccctaggaatatgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATAAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 215223 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 215290 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8971.000000 s hg38.chr17_GL383563v3_alt 215294 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 215424 67 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 215491 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 215495 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8962.000000 s hg38.chr17_GL383563v3_alt 215562 130 + 375691 CCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 215692 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8962.000000 s hg38.chr17_GL383563v3_alt 215696 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 215826 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8962.000000 s hg38.chr17_GL383563v3_alt 215830 130 + 375691 CCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 215960 200 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9512.000000 s hg38.chr17_GL383563v3_alt 216160 138 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGTGTCTGTCCTtttccg s papAnu2.chr16 120501 138 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 135 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 216298 67 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccg s papAnu2.chr16 120572 67 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 138 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 216365 63 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 138 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4548.000000 s hg38.chr17_GL383563v3_alt 216428 72 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120501 72 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 138 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 216500 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9610.000000 s hg38.chr17_GL383563v3_alt 216567 133 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATAAGGGGAGCTGCACGGTGTCTGTCCTtttccg s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4642.000000 s hg38.chr17_GL383563v3_alt 216700 64 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120572 64 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 216764 67 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4525.000000 s hg38.chr17_GL383563v3_alt 216831 67 + 375691 ccatccctaggaacgtgactaccctacgtactttcctatgaggggagctgcacggtgtctgtccttt s papAnu2.chr16 120569 66 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCA-TGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTT i papAnu2.chr16 T 67 T 134 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 216898 336 + 375691 CCATCCCTAGGAACGTGACTACCCCTACGTACTTCCTATGAGGGAGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagctgcacggtgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120635 134 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4548.000000 s hg38.chr17_GL383563v3_alt 217234 72 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120501 72 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 134 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9093.000000 s hg38.chr17_GL383563v3_alt 217306 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggtgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4718.000000 s hg38.chr17_GL383563v3_alt 217436 70 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccg s papAnu2.chr16 120569 70 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 134 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=3946.000000 s hg38.chr17_GL383563v3_alt 217506 63 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt s papAnu2.chr16 120505 63 + 74645514 ACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTG i papAnu2.chr16 T 134 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4206.000000 s hg38.chr17_GL383563v3_alt 217569 67 + 375691 tCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtt s papAnu2.chr16 120501 67 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTG i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9230.000000 s hg38.chr17_GL383563v3_alt 217636 135 + 375691 tccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGTGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 217771 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 217838 66 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9352.000000 s hg38.chr17_GL383563v3_alt 217904 135 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 135 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 218039 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 218106 67 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTT s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4392.000000 s hg38.chr17_GL383563v3_alt 218173 67 + 375691 CCATCCCTAGGAATGGGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTGtt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 218240 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 218307 133 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9352.000000 s hg38.chr17_GL383563v3_alt 218440 135 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 135 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 218575 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 218642 67 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTTTT s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 218709 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8666.000000 s hg38.chr17_GL383563v3_alt 218713 129 + 375691 CCCTAGGAATGGGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt s papAnu2.chr16 120506 129 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTT i papAnu2.chr16 T 130 T 134 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8874.000000 s hg38.chr17_GL383563v3_alt 218842 135 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCCTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCATCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 134 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 218977 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 219044 200 + 375691 ccatccctaggaacgtgactaccctacctacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8883.000000 s hg38.chr17_GL383563v3_alt 219244 135 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgagggcagccgcacggcgtctgtccttttCCGTCCCTGGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCctttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 135 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 219379 70 + 375691 catccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9215.000000 s hg38.chr17_GL383563v3_alt 219449 130 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 219579 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 219583 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9610.000000 s hg38.chr17_GL383563v3_alt 219650 133 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATAAGGGGAGCTGCACGGTGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCG s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4642.000000 s hg38.chr17_GL383563v3_alt 219783 64 + 375691 TCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120572 64 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 219847 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 219851 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9084.000000 s hg38.chr17_GL383563v3_alt 219918 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 220048 334 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggtgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagctgcacggcttctgtccttttccgtccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttt e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4548.000000 s hg38.chr17_GL383563v3_alt 220382 72 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120501 72 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 135 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 220454 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9206.000000 s hg38.chr17_GL383563v3_alt 220521 130 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 220651 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9572.000000 s hg38.chr17_GL383563v3_alt 220655 130 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttCCATCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4558.000000 s hg38.chr17_GL383563v3_alt 220785 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgccctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 121 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 220852 283 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctgggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagctgcacggcgtctgtccttttCCATCCCCTAGGAAA e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 121 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=3119.000000 s hg38.chr17_GL383563v3_alt 221135 58 + 375691 TGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTAAAACgt s papAnu2.chr16 120515 58 + 74645514 TATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 121 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4069.000000 s hg38.chr17_GL383563v3_alt 221193 62 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt s papAnu2.chr16 120506 62 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTG i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9221.000000 s hg38.chr17_GL383563v3_alt 221255 135 + 375691 tCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggtgtctgtcctttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 221390 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 221394 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9206.000000 s hg38.chr17_GL383563v3_alt 221461 130 + 375691 ccctaggaatatgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATAAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 221591 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 221658 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8971.000000 s hg38.chr17_GL383563v3_alt 221662 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 221792 71 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 221863 67 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8962.000000 s hg38.chr17_GL383563v3_alt 221930 130 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 222060 141 + 375691 ccatcccctaggaatgtgactaccctacgtacttcctatgaggggagtccgcacggcgtctgtccttttTCCATCCCTGGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGTCGCACGGCGTCTGTCCTtttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 222201 67 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9131.000000 s hg38.chr17_GL383563v3_alt 222268 133 + 375691 CCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCG s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4511.000000 s hg38.chr17_GL383563v3_alt 222401 64 + 375691 TCCCTGGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGTCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120572 64 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 222465 138 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9131.000000 s hg38.chr17_GL383563v3_alt 222603 133 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccg s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 222736 67 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCG s papAnu2.chr16 120572 67 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4337.000000 s hg38.chr17_GL383563v3_alt 222803 63 + 375691 TCCCTAGGAACGTGACTACCCTACGTACTTCCAATGAGGGGAGCCGCACGGCGTCTGTCCTtt s papAnu2.chr16 120572 63 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTT i papAnu2.chr16 T 67 T 134 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8977.000000 s hg38.chr17_GL383563v3_alt 222866 135 + 375691 tccgtccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120501 135 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 134 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 223001 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9093.000000 s hg38.chr17_GL383563v3_alt 223005 130 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 223135 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 223202 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=8878.000000 s hg38.chr17_GL383563v3_alt 223206 133 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccg s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 130 T 133 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 223339 738 + 375691 tccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTGGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGTCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagctgcacggcgtctgtccttttccatccctgggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttCCATCCCTGGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGTCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 133 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9131.000000 s hg38.chr17_GL383563v3_alt 224077 133 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccg s papAnu2.chr16 120506 133 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 133 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4642.000000 s hg38.chr17_GL383563v3_alt 224210 64 + 375691 tccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120572 64 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 224274 4 + 375691 CCAT e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4289.000000 s hg38.chr17_GL383563v3_alt 224278 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 224345 67 + 375691 ccctaggaacgtgactaccctacgtacttcctataaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9206.000000 s hg38.chr17_GL383563v3_alt 224412 130 + 375691 CCCTAGGAATATGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttccatccctaggaacgtgactaccctacgtacttcctataaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 224542 67 + 375691 CCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 224609 4 + 375691 ccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9093.000000 s hg38.chr17_GL383563v3_alt 224613 130 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCTGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4680.000000 s hg38.chr17_GL383563v3_alt 224743 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 224810 71 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccat e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4411.000000 s hg38.chr17_GL383563v3_alt 224881 67 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCAT s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4167.000000 s hg38.chr17_GL383563v3_alt 224948 67 + 375691 CCCTAGGAACGTGACTACCCTACGTACTTCCTACGAGGGGAGCCGCACGGCGTCTGTCCTtttccat s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=9084.000000 s hg38.chr17_GL383563v3_alt 225015 130 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagctgcacggtgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=4802.000000 s hg38.chr17_GL383563v3_alt 225145 67 + 375691 ccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggtgtctgtcctttt s papAnu2.chr16 120569 67 + 74645514 CTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 67 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 225212 271 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttcca e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C e panTro4.chr17 195069 1069 + 82630442 T a score=5735.000000 s hg38.chr17_GL383563v3_alt 225483 68 + 375691 tccctaggaacgtgactaccctacgtacttcctataaggggagctgcacggtgtctgtccttttccat s panTro4.chr17 194000 68 + 82630442 tccctaggaatgtgactactctacgtacttcctataaggggagtcgcacggcatctgtccttttccat i panTro4.chr17 T 1069 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=14475.000000 s hg38.chr17_GL383563v3_alt 225551 67 + 375691 ccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgcccttttCCAT s panTro4.chr17 194068 67 + 82630442 ccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcatctgtccttttccat i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=13801.000000 s hg38.chr17_GL383563v3_alt 225618 60 + 375691 CCCTAGGAATGTGACTACCCTACGTGCTTCCTATGAGGGGAGCTGCACGGTGTCTGTCCT s panTro4.chr17 194135 60 + 82630442 ccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtcct i panTro4.chr17 C 0 I 6887 s papAnu2.chr16 120506 60 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCT i papAnu2.chr16 T 67 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=14862.000000 s hg38.chr17_GL383563v3_alt 225678 70 + 375691 tttccatccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtcctttt s panTro4.chr17 201082 70 + 82630442 tttcgatccctagcaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtcctttt i panTro4.chr17 I 6887 C 0 s papAnu2.chr16 120566 70 + 74645514 TGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 C 0 T 135 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=5730.000000 s hg38.chr17_GL383563v3_alt 225748 66 + 375691 ccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttt s panTro4.chr17 201152 66 + 82630442 ccgtccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtccttt i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 135 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=30487.000000 s hg38.chr17_GL383563v3_alt 225814 138 + 375691 tccgtccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCGTCCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGCAGCCGCACGGCGTCTGTCCTtttccg s panTro4.chr17 201218 138 + 82630442 tccgtccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtccttttccgtccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcgtctgtccttttcca i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120501 138 + 74645514 TCTGACCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 135 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=14581.000000 s hg38.chr17_GL383563v3_alt 225952 67 + 375691 tccctgggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccg s panTro4.chr17 201356 67 + 82630442 tccctaggaatgtgactaccctacgtacttcctatgaggggagtcgcagggcgtctgtccttttcca i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120572 67 + 74645514 TCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTTTTG i papAnu2.chr16 T 67 T 133 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=18165.000000 s hg38.chr17_GL383563v3_alt 226019 202 + 375691 tccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTGGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGTCGCACGGCGTCTGTCCTtttccat s panTro4.chr17 201423 202 + 82630442 tccctaggaatgtgactaccctacgtacttcctatgaggggagtcgcacggcgtctgtccttttccgtccctaggaatgtgacaaccctacgtacttcctataaggcgagtcgcacggcgtctgtccttttccatccctaggaatgtgactaccctacgtacttcctataaggggagtcgcacggcgtctgtccttttccat i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120639 133 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=28522.000000 s hg38.chr17_GL383563v3_alt 226221 130 + 375691 ccctaggaacgtgactaccctacgtacttcctatgaggggagccgcacggcgtctgtccttttCCATCCCTAGGAACGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTttt s panTro4.chr17 201625 130 + 82630442 ccctaggaatgtgactaccctacgtacttcctataaggggagtcacacggcatctgtccttttccatccctaggaatgtgactaccctacgtacttcctataaggcgagtcgcacggcatctgtcctttt i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120506 130 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGTCCCTAGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTGTCTGTCCTTTT i papAnu2.chr16 T 133 T 130 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=382.000000 s hg38.chr17_GL383563v3_alt 226351 4 + 375691 ccat s panTro4.chr17 201755 4 + 82630442 ccat i panTro4.chr17 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e papAnu2.chr16 120636 130 + 74645514 T e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=14043.000000 s hg38.chr17_GL383563v3_alt 226355 67 + 375691 ccctaggaacgtgactaccctacctacttcctatgaggggagccgcacggcgtctgtccttttCCAT s panTro4.chr17 201759 67 + 82630442 ccctaggaatgtgactaccctacgtacttcctataaggggagtcgcacggcgtctgtccttttccac i panTro4.chr17 C 0 C 0 s papAnu2.chr16 120506 67 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCTGT i papAnu2.chr16 T 130 T 67 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108799 0 + 75148670 C e rheMac3.chr16 116238 0 + 80904711 C e macFas5.chr16 122039 0 + 80997621 C e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=74358.000000 s hg38.chr17_GL383563v3_alt 226422 65 + 375691 CCCTAGGAATGTGACTACCCTACGTACTTCCTATGAGGGGAGCCGCACGGCGTCTGTCCTtttcc s panTro4.chr17 201826 65 + 82630442 ccctagcaatgtgactaccctacgtacttcctatgaggggagccgcacagcgtctgtccttttcc i panTro4.chr17 C 0 C 0 s rheMac3.chr16 116238 65 + 80904711 ccctaggaatatgactattctatgttcgtcctataaggcgagctgcatagtgtctgtccttGtct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122039 65 + 80997621 ccctaggaatatgactattctatgttcgtcctataaggcgagctgcacggtgtctgtccttGtct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120506 65 + 74645514 CCCTAGGAATATGACTATTCTATGTTCGTCCTATAAGGCGAGCTGCACGGTGTCTGTCCTTGTCT i papAnu2.chr16 T 67 C 0 s chlSab2.chr16 108799 65 + 75148670 ccctaggaatatgactattctatgttcgtcctataaggcgagctgcccggtgtctgtccttgtct i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e nomLeu3.chr19 207658 0 - 81552678 C e ponAbe2.chr17 81752 0 + 73212453 C a score=10903.000000 s hg38.chr17_GL383563v3_alt 226487 6 + 375691 atccct s panTro4.chr17 201891 6 + 82630442 gtccct i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 207658 6 - 81552678 Atccct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116303 6 + 80904711 gtccct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122104 6 + 80997621 gtccct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120571 6 + 74645514 GTCCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108864 6 + 75148670 gtccct i chlSab2.chr16 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e canFam3.chr9 15682508 15 - 61074082 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e ponAbe2.chr17 81752 0 + 73212453 C a score=88127.000000 s hg38.chr17_GL383563v3_alt 226493 48 + 375691 aggaacgtgactaccctacgtacttcctatgaggggagccgcacggca s panTro4.chr17 201897 48 + 82630442 aggaatatgactaccctacatatttcctataaggggagccgcacggca i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 207664 48 - 81552678 gggaatgtgactaccctatgtacgtcctataagtggagccgcacagcg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116309 48 + 80904711 aggaatatgactactctatgcatgtcctataaggagagctgcatggtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122110 48 + 80997621 aggaatatgactactctatgcatgtcctataaggagagctgcatggtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120577 48 + 74645514 AGGAATATGACTACTCTATGCATGTCCTATAAGGAGAGCTGCACGGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108870 48 + 75148670 aggaatatgactactctatgcatgtcctataaggcgagctgcacggtg i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15682523 48 - 61074082 aagaatttgattactctagatatttcatatgaatggaattgtatggta i canFam3.chr9 I 15 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e ponAbe2.chr17 81752 0 + 73212453 C a score=18519.000000 s hg38.chr17_GL383563v3_alt 226541 14 + 375691 tctgtcctttttt--g-- s panTro4.chr17 201945 14 + 82630442 tctgtcctttttt--g-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81752 14 + 73212453 tctggcctttttt--g-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207712 14 - 81552678 tctgccctttttc--g-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116357 13 + 80904711 tctgtcctttttt----- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122158 13 + 80997621 tctgtcctttttt----- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120625 14 + 74645514 TCTGTCCTTTTTTG---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108918 14 + 75148670 tctgtccttcttt-g--- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15682571 15 - 61074082 -ttgatctttttt--gtg i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=1314.000000 s hg38.chr17_GL383563v3_alt 226555 1 + 375691 g s panTro4.chr17 201959 1 + 82630442 g i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81766 1 + 73212453 g i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207726 1 - 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116370 1 + 80904711 g i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122171 1 + 80997621 g i macFas5.chr16 C 0 C 0 s canFam3.chr9 15682586 1 - 61074082 a i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I e chlSab2.chr16 108932 0 + 75148670 C e papAnu2.chr16 120639 0 + 74645514 C a score=162743.000000 s hg38.chr17_GL383563v3_alt 226556 67 + 375691 -ctgcttatttccctcagcatcacttcttcagagctcacgcacgcagcaacccgtgtcagcacgtcct s panTro4.chr17 201960 67 + 82630442 -ctgcttatttccctcagcgtcacttcttcagggctcacgcacgcagcaacccgtgtcagcatgtcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81767 67 + 73212453 -ctgcttatttcactcagcatcacttcttcagggctcacgcacacagcagcccgtgtcagaatgtcct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207727 67 - 81552678 -ctgcttatttcactcagcatcacttcttcagggctcacgcacgcagcagcccgtgtcagaacatcct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116371 67 + 80904711 -ctgcttatttcactcggcatcacttcttcagggttcacgcatgcgggagcctatatcagaatgtcct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122172 67 + 80997621 -ctgcttatttcactcggcatcacttcttcagggttcacgcatgcgggagcctatatcagaatgtcct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120639 67 + 74645514 -CTGCTTATTTCACTCGGCATCACTTCTTCAGGGTTCACGCATGCGGGAGCCTATATCAGAATGTCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108932 67 + 75148670 -ctgcttatttcactcggcatcacttcttcagggttcacgcatgcgggagcctatatcagaatgtcct i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15682587 60 - 61074082 ctggcttttttcacttagcataataacctcaggtgttgca--------accctgtgtcagaattttct i canFam3.chr9 C 0 C 0 e mm10.chr11 75856895 752 + 122082543 I e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=311450.000000 s hg38.chr17_GL383563v3_alt 226623 119 + 375691 tcctttctgaggctgagcaatgttcccctgtacggatggatc-----acgttttg------------tcgtctgttcataggtacgtggggtgcttcccccttttcgctGGTCCTtctgtt------ttcatctgtct-cccc s panTro4.chr17 202027 119 + 82630442 tcctttctgaggctgagcagtgttcccctgtatggatggatc-----acgttctg------------ttgtctgttcataggtacgtggggtgcttcccccttttcgctGGTCCTtctgtt------ttcatctgtct-ccgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81834 119 + 73212453 tcctttctgaggctgagcaacgttcccctgtatggatggatc-----acgttttg------------tcatctgttcataggtacgtggggtgcttccaccttttggctGGTCCTtctgtt------ttcttctgtct-cccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207794 119 - 81552678 tcctttctgaggctgagcaatgttcccctgtatggatggatc-----acagtttg------------tcatctgttgataggtacgtggggtgcttccaccttttggctGGTCCTtctgtt------ttcctctgtct-cccc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116438 118 + 80904711 tccttcccgagactgagcaacgttcccctgcacggatagatc-----acattttg------------tcatctgttgataggtgcgtgggatgcttccacctgttggctGGTCCTtctgtt------gtcatctgtc--cccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122239 118 + 80997621 tccttcccgagactgagcaacgttcccctgcacggatagatc-----acattttg------------tcatctgttgataggtgcgtgggatgcttccacctgttggctGGTCCTtctgtt------gtcatctgtc--cccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120706 118 + 74645514 TCCTTCCCGAGACTGAGCAACGTTCCCCTGCACGAATAGATC-----ACATTTTG------------TCATCTGTTGATAGGTGCGTGGGATGCTTCCACCTGTTGGCTGGTCCTTCTGTT------GTCATCTGtc--cccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 108999 118 + 75148670 tccttcccgagactgagcaacgttcccctgcgcggatagatc-----acattttg------------tcatcggctgacaggtgcgtgggatgcttccacctgttggctGGTCCTtctgtt------gtcatctgtc--cccc i chlSab2.chr16 C 0 C 0 s mm10.chr11 75857647 136 + 122082543 TTCCAtttgaggatggtgatggtcccactgtgtgtctgtatcccacagcattctgtatagcgaatgctcatctgtccataggcacttgggttgcctgcacccattggctGGTCCTTA-ATT------TGCAACTGTCTCCCCC i mm10.chr11 I 752 C 0 s canFam3.chr9 15682647 130 - 61074082 tcctttttgaggttgaatggtgttccattgcaggtatgcatc-----acattttgtctagttat---tcatccattgatggacacttgggtcatgtctaccttttggctGGTCCTttcatttatttatttatttattt----- i canFam3.chr9 C 0 I 102 e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=287639.000000 s hg38.chr17_GL383563v3_alt 226742 106 + 375691 caccaggctcca----------------------------ccaaa---------------------------------------------------------------------------------------------------caggaggaagcatcacagccgtcttgctcaccactg-tttcttcaagctcctagcacac---gcctcacacatcgtaggtgttcagtaaacgc s panTro4.chr17 202146 106 + 82630442 caccaggctcca----------------------------ccaaa---------------------------------------------------------------------------------------------------caggaggaagcatcacagccgtcttgctcaccactg-tttcttcaagctcctagcacac---gcctcacacatcgtaggtgttcagtaaacgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 81953 106 + 73212453 caccaggctcca----------------------------ccaaa---------------------------------------------------------------------------------------------------caggaggaagcatcacagccgtcttgctcaccactg-tttcttcaagctcctagcacac---gcgtgacacatcgtaggtgttcagtaaacgc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 207913 107 - 81552678 caccaggctcca----------------------------ccgaa---------------------------------------------------------------------------------------------------caggaggaagcatcacagccatctcgctcaccactgttttcttcaagctcctagcacac---gcctgacacgtcgtaggtgttcagtaaacgc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116556 104 + 80904711 caccaggcccca----------------------------tcaag---------------------------------------------------------------------------------------------------caggaggaagcatcacagccgtcttgctcaccaccg---tcttcaagctcctagcacac---gcctgacacatcgtaggtgttcagtaaacgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122357 104 + 80997621 caccaggcccca----------------------------tcaag---------------------------------------------------------------------------------------------------caggaggaagcatcacagccgtcttgctcaccaccg---tcttcaagctcctagcacac---gcctgacacatcgtaggtgttcagtaaacgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120824 104 + 74645514 caccaggcccca----------------------------ccaaG---------------------------------------------------------------------------------------------------CAGGAGGCAGCATCACAGCCGTCTTGCTCACCACCG---TCTTCAAGCTCCTAGCACAC---GCCTGACACATCGTAGGTGTTCAGTAAACGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 109117 104 + 75148670 caccaggcccca----------------------------ccaag---------------------------------------------------------------------------------------------------caggaggcagcatcacagccgtcttgctcaccaccg---tcttcaagctcctagcacac---gcctgacacatcgtaggtgttcagtaaacgc i chlSab2.chr16 C 0 C 0 s mm10.chr11 75857783 107 + 122082543 CACCAGGTTCTA----------------------------TCATC---------------------------------------------------------------------------------------------------CAGGAAGGAGAGCCATGGCCGTCT-GCTCACCACTG-GTCCTTCAAGCTCCTAACACACTTTGACTAACACA-CATTAATACTGAATAGCCGC i mm10.chr11 C 0 I 4 s canFam3.chr9 15682879 233 - 61074082 cagcaggctccatgcagggaacccgatgtgagactcaatcccaagtctctaggatcaggccctgggctgaaggtggcgctaaaccgctgagtcacctgggctgcccTGGTCCTTTCATTTTTAGAAAccacttgacttaaactccaggggggcaggtccagggcactgtgttcaccactg-tatcttcaaatttctagcacag---gcttgacacacaataggtgctcagcaaacac i canFam3.chr9 I 102 C 0 e calJac3.chrUn_GL286409 923800 20 - 1291538 I a score=1344356.000000 s hg38.chr17_GL383563v3_alt 226848 460 + 375691 tggttgaatgactgTGCTGGCAGCTGCGGGTCGTTTGCTGCAACGTGTCTCAACCTACA--GTCTGCCACCTTCCCGGGGAAGAAGCCTGG------------GTGTT---TCAC----TCAAGTTCCTG----------------------------------TAATTAATCAAACGGA-CTTCCTATTTCAGATTAAAAGAGGGATAAAGAGGAAGGGCTTGATGGGGTGTGCTGGTGGGGAGGAAAGCGCAGTGAGCCTCCCTGACTGCCCAGGGTGCTCCCAGCCTCTCCT---------------CCCCAGCTG-CCCTGCCTCCCCTGGCATATCCCAGCCCCCGG--CCCGTG-CCTCAGCCTTGCCTCCTGCTGCAAAAATCCGTCTCCCACCCCCACTCCACTC-----AATTCCTGCTCAGTGACGTTCTTTTGGAAGACA-GATGAAGAGCACAGGACCCAAAGCATCAGGTTGGATTGCCATTGGTACTCAGCCATTTTGGGATAGTCAACC--TGttttttttttttttt------- s panTro4.chr17 202252 452 + 82630442 tggttgaatgactgTGCTGGCAGCTGCGGGTCATTTGCTGCAACCTATCTCAACCTACA--GTCTGCCACCTTCCCGGGGAAGAAGCCTGG------------GTGTT---TCAC----TCAAGTTCCTG----------------------------------TAATGAGTCAAATGGA-CTTCCTATTTCAGATTAAAAGAGGGATAAATAGGAAGGGCTTGATGGGGTGTGCTGGTGGGGAGCAAAGCGCAGTGAGCCTCCCTGACTGCCCAGGGTGCTCCCAGCCTCTCCT---------------CCCCAGCTG-CCCTGCCTCCCCTGGCATATCCCAGCCCCCGG--CCTGTG-CCTCAGCCTTGCCTCCTGCTGCAACAATCCGTCTCACACCCCCACTCCACTC-----AATCCCTGCTCAGTGATGTTCTTTTGGAAGACA-GATGAAGAGCACAGGATCCAAAGCAGCAGGTTGGATTGCCATTGGTACTCAGCCATTTTGGGATACTCAACC--t--------tttttttt------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 82059 451 + 73212453 tggttgaatgactgTGCTGGCAGCTGTGGGTCGTTTGCTGCAACGCGTCTCAACCTACA--GTCTGCCACCTTCCTGGGAAAGAAGCCTGG------------GTGTT---TCAC----TCAAGTTCCTG----------------------------------TAATTAATCAAATGGA-CTTCCTATTTCAGATTAAAAGAGGGATAAAGAGG-AGGGCTTGATGGGGTGTGCTCATGGGGAGGAAAGCGCAGTGAGCCTCCCTGACTGCCCAGGGTGCTCCCAGCCTCTCCT---------------CCCCAGCTG-CCCTGCCTCCCCTGGCATATCCCAGCCCCCGG--CCCGTG-CCTCAGCCTTGCCTCCTGCTGCAACAATCCGTCTCCCATCCCCACTCCACTC----AAATCCCTGCTCAGTGAGGTTCTTTTGGAAGACA-GATAAAGAGCACAGGATCCAAAGCATCAGGTTGAATTGCCATTGGTACTCAGCCATTTTGGGACAGTCAACC-----------tttttttt------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 208020 456 - 81552678 tggttgaatgactgTGCTGGCAGCTGTGGGTCGTTCGCTGCAACGCGTCTCAACCTACA--GTCTGCCACCTTCCTGGGGAAGAAGCCTGG------------GTGTC---TCAC----TCAAGTTCCTG----------------------------------TAATTAATCAAATGGACCTTCCTATTTCAGCTTAAAAGAGGGATAAAGAGG-AGGGCGTGACGGGGTGTGCTGGTGGGGAGGGAAGCGCAGTGAGCCGCCCTGACTGCCCAGGGTGCTGCCAGCCTCTCCT---------------CCCCAGCTG-CCCTGCCTCCCCTGGCATATCCCAGCCCCCGG--CCCATG-CCTCAGCCTTGCCTCCTGCTGCAGCAATCTGTCTCCCATCCCCACTCCACTC----AACTCCCCGCTCAGTGAGATTCTTCTGGAAGACA-GATAAAGAGCATGGGATCCAAAGCATCAGGTTGAATTGCCATTGGTACTCAGCCATTTTGGGATAGTCAACC--tttt-----ttctcttt------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 116660 451 + 80904711 tggctgaatggctgTGTTGGCAGCTGTGCGTCGTTTGCTGCAACACGTCTCAACCTACA--GTCTGCCACCTTCCTGGGGAAGAGGCCTGG------------GGGTT---TCAC----CCAAGCTCCTG----------------------------------TAATTAATCAAATGGA-CTTCCTATTTCAGATTAAAAGAGGGATAAAGAGGAAGGGCTTGAGGGGGTGTGCTGGTGGAGAGGAAAGCCCAGTGAGCCTCCTTGACTGCCCAGGGTGCTCCCAGCCTCTCCT---------------CCCTAGCTG-CCTGGCCTCCCCTGGCATATCCGAGCCCCCAG--CCCGTG-CCTCAGCCTTGCCTCCTGCTGCAACAGTCTGTCTCCCATCCCCACTCGAA-------AATCGCTGCTCAGCGAAGTTCTTTTGGAAGACG-GATAAAGATCACACGACCCCAAGCATCAGGCTGAACTGCCATTGGTGCTCAGCCATTCGGGAGTAGTCAACC---------tttttttttt------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122461 460 + 80997621 tggctgaatggctgTGTTGGCAGCTGTGCGTCGTTTGCTGCAACACGTCTCAACCTACA--GTCTGCCACCTTCCTGGGGAAGAGGCCTGG------------GGGTT---TCAC----ACAAGCTCCTG----------------------------------TAATTAATCAAATGGA-CTTCCTATTTCAGATTAAAAGAGGGATAAAGAGGAAGGGCTTGAGGGGGTGTGCTGGTGGAGAGGAAAGCCCAGTGAGCCTCCTTGACTGCCCAGGGTGCTCCCAGCCTCTCCT---------------CCCTAGCTG-CCTGGCCTCCCCTGGCATATCCGAGCCCCCAG--CCCGTG-CCTCAGCCTTGCCTCCTGCTGCAACAGTCTGTCTCCCATCCCCACTCGAA-------AATCGCTGCTCAGCGAAGTTCTTTTGGAAGACG-GATAAAGATCACACGACCCCAAGCATCAGGCTGAACTGCCATTGGTGCTCAGCCATTTGGGGGTAGTCAACCttttttttttttttttttt------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 120928 455 + 74645514 TGGCTGAATGGCTGTGTTGGCAGCTGTGCGTCGTTTGCTGCAACACGTCTCAACCTACA--GTCTGCCACCTTCCTGGGGAAGAGGCCTGG------------GGGTT---TCAC----CCAAGCTCCTA----------------------------------TAATTAATTAAATGGA-CTTCCTATTTCAGATTAAAAGAGGGATAGAGAGGAAGGGCTTGAGGGGGTGTGCTGGTGAAGAGGAAACCCCAGTGAGCCTCCCTGACTGCCCAGGGTGCTCCCACCCTCTCCT---------------CCCTAGCTG-CCTGGCCTCCCCTGGCATATAAGAGCCCCCAG---CCGTG-CCTCAGCCTTGCCTCCTGCTGCAACAGTCTGTCTCCCATCCCCACTCGAC-------AATCGCTGCTCAGCGAAGTTCTTTTGGAAGACG-GATAAAGATCACACGACCCCAAGCATCAGGCTGAACTGCCATTGGTGCTCAGCCATTCGGGGGTagtcaacc----ttttttttttttttt------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 109221 444 + 75148670 tggctgaatggctgTGTTGGCAGCTGTGCGTCGTTTGCTGCACCACGTCTCAACCTACA--GTCTGCCACCTTCCTGGGGAAGAGGCCTGG------------GGGTT---TCAC----CCAAGCTCCTG----------------------------------TAATTAAGCAAATGGA-CTTCCCATTTCAGATT--AAGAGGGATAGAGAGGAAGGGCTTGAGGGGGTGTGCGGGTGCAGAGGAAAGCCCAGTGAGCCTCCCTGACTGCCCAGGGTGCTCCCAGCCTCTCCT---------------CCCTCACTG-CCTGGCCTCCCCTGGCATATCCGAGCCCCCAG--CCCGTG-CCTCAGCCCTGCCTCCTGCTGCAACAGTCCGTCTCCCATCCCCACTCGAC-------AATCGCTGCTCAGCGAAGTTCTTTTGGAAGACG-GATAAAGATCACACGACCCCAAGCATCAGGCTGAACTGCCACTGGTGCTCAGCCATTCGGGGGTAGTCAACC--------------ttttt------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 923820 416 - 1291538 TGGCTGAATGACTGT--TGGCAGCTGTGGGTCATTTGCTGCAATGCGCCTCAACCTACA--GTCTGCTGCCTTCCTGGGGAAGAGGCCTGG------------GGGTG---TCAC----CCAAGTTCCTG----------------------------------TAATTAATCAAATGGA-CCTCCTATTTCAGATGGAAAGAGGGACAGAGAGGAAGGGCCTGGCCGGCTGTGCTGGTGGAGGGGAAAGCCCAGTGAG----------------------------CCTCTCCT---------------GCCTAGCCG-CCCTGCCTCCTGTGGCAGACCACAG-CCCCAG--CCCAGG-CCTCAGCCTTGCCT-CTGCTGCAACAAGCCATCTCCCATGCCCACCCCACTC--AAAAATCAATGCTCAGAGGAGTTCTTTTAGAAGAC-----AAAGAGCACAGGATCCAAAGCCTCAGGGTGAATTGCCATTGGTACTCAGCCATTTGCGGCTGGTCAAtc-------------ttttat------- i calJac3.chrUn_GL286409 I 20 C 0 s mm10.chr11 75857894 463 + 122082543 CAGTTAAACAAGGAAATTGGTAG-TGTGAGTACTTTTCTGGAACATATCCCAACCTACAGGGCCAGTCACCTTCCTGAGGAAGTGGTCTGGTATGCTGGATAAGTGCTCTGTCACTGTGCCATGTTCCCAGACTAGGAAGTGGCCTGGTAGTTTCTTATTGTCCTCGTTGGGCAAATGGG-CTTGTTATTTCAAATTCAAAGAGTGATTA--GGGAAAGTGTCAAGCAAGTGTGCTGATGGAGATCAAGCCCCCAGGCATCTCCCTGATGGTAC-------------CTGCTCCT---------------TCC-------CTTTCTCTTCCCCGGCACAGTACAGTCACCAGAACCCATG-CTTCGGCTGTACCATCTACCACAAT--TCTGACTCTCCACCCCACCTCCCTGCCAACATACTCTCATCAGCAGAGCGCTTTGTGAAGATGTGATGAAGGACACAGGATCCAAAGTACAGAGCTGAGTAGCGGGTG------------TCAGGGGT-------C-------------------------- i mm10.chr11 I 4 C 0 s canFam3.chr9 15683112 466 - 61074082 tggctgtatggctgaaGTAG-AGTTATAGGTAGTTTGCTGGAACGTG-CCCAATCTATA-TAGTTGCCACCTTTCTGGAGATGTGGCCTGA------------GGGTT-TCTCAC----CTAAATTCTTG----------------------------------TAATTAATCAAATGGA-TTTATTGTTTCAGATT-AAAGAAGGATAAAGGAGAAGTGCTTAGCAGGGCCTGCCAGTGAAGAGCAAGCGGCAGTGAACCTCCCTGGCTGT-----GCGCTCCCAGCTCCTCATCAAGCACCAATGTGCCCCTGGCTGCCCCGGGCTCCCCTGGAATGTCACGGCCAGCAGTCCCCATGTCCTCAGCCTCATCTTCCGTTGCAACAATCCACCTCT-ACCCCTCCCCCATGCTTAAAAAATACTAATCAGTAAAGTGCTTTTAGAAAATAGGATAAAGAGGCCAAGATCCAAAGTATTAGGGTGAATTGC-----------ATGAACATGCTGATAATCAATG-----------GTTTTTTTGGTATTT i canFam3.chr9 C 0 C 0 a score=387323.000000 s hg38.chr17_GL383563v3_alt 227308 156 + 375691 ttttgagacagggtctcactctgttgcccaggctggagtgcaatggcacgatcatggctcactgcagccttgacaccctgggctcaagtgatcctcccacctcaacctcccgagtagccaggaccacagcaacacgccaccatg-----------------------------------------------------------------cccggcgaaGTC s panTro4.chr17 202704 156 + 82630442 ttttgagacagggtctcactctgttgcccaggctggagtgcagtggcacgatcatggctcactgcagccttgacaccctgggctcaagtgatcctcccacctcaacctcctgagtagccaggaccacagcaacacgccaccatg-----------------------------------------------------------------cccggctaaGTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 82510 156 + 73212453 ttttgagacagggtctcactctgttgcccaggctggagtgcagtggcacgaccagggctcactgcagccttgacaccgtgggctcaagcgatcctcccacctcaacctcccgagtagccaggaccacaggaacacgccaccatg-----------------------------------------------------------------cctggctaaGTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 208476 156 - 81552678 ttttgagacagggtctcactctgttgcccaggctggagtgcagtggcgcgatcacggctcactgcagccttgacaccctgggctcaagcgatcctcccacctcaacctcccgagtagccaggaccacaggaacacgccaccatg-----------------------------------------------------------------cccagctaaGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 117111 221 + 80904711 ttttgagacagggtctcactctattgcccaggctggagtgcagtggcacaatcatggatcactgcagccttgacactctgggctcagccaatcctcccacctcagcctcccgagtagctcagaccacaggaacacgccaccacggccggctaaGTCAATCATTTTTGAACTAAGCCCATCGACTGCGTACAATTCACCCTGATATTTACGCCGGCTAAGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 122921 156 + 80997621 ttttgagacagggtctcactctattgcccaggctggagtgcagtggcacgatcatggctcactgcagccttgacactctgggctcagggaatcctcccacctcagcctcccgtgtagctcagaccacaggaacacgccaccacg-----------------------------------------------------------------gccggctaaGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 121383 156 + 74645514 ttttcagacaaggtctcactctattgcccaggctggagtgcagtggcacgatcatggctcactgcagccttgacactctgggctcagggaatcctcccacctcagcctcccgtgtagctcaGACCACAGGAAcacgccaccaca-----------------------------------------------------------------gccggctaagtC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 109665 156 + 75148670 ttctgatacagagtctcactctgttgcccaggctggagtgcagtggcacgatcatggctcactgcagccttgacactctgggctcagggaatcctcccacctcagcctcccgagtagctcagaccacaggaacacgccaccacg-----------------------------------------------------------------gccggctaaGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 924236 139 - 1291538 ttttgagacagggtcttactctgctgccca-----gagtgcagtggcacgatcatggctcactgcagcc---------tgggctcaagcagtcctc---cctcagcctcctgagcagctagaaccacaggaacatgctaccatg-----------------------------------------------------------------cccagctaaGTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75858357 32 + 122082543 -TTTGGGGGGGGGTAT-------------------------------------------------------------------------------------TCAACTCCCC--------------------------------------------------------------------------------------------------CCAATCT----- i mm10.chr11 C 0 C 0 e canFam3.chr9 15683578 0 - 61074082 C a score=1935515.000000 s hg38.chr17_GL383563v3_alt 227464 594 + 375691 AACCACTTTTGAACTATC--AAAAAAGCCCGTCAACTTCATACGATTCACCCCAATATTTATGCCCAGAAGGGGCAATAATCCCACAGGCCAGGCAGGCC--ACGTGCCTCCCCGGGGCTCTGTGGGCAGGTCCAT----------------------GAGCACCCGATGGA----TCATTCCCTGTGAGTTCATTGTAACGGGGCCTC-GCTCCGATTC----TCTCCTGCTGTCACTGTAGTCCAGGTGGAAGGTCTAAGAGCTCACCCTGACCATCCAGCATGGCTGGTGAT-CTGGACCAGCGTGAGGAGCAGCAGTTCCTAAG-TCCCAGCATCAGG-GG-ACCACAGCACACAGGTGTATCATCCAGTACAG-GAGGTGCACCCATGCAGATGTGCATAAAACACACTGTCAGTATTTCTGAAAATGCCTTCCGCAGGGGAGAGCAGATCTGTTGAGGTGAGGTGCAAAGGACCCCA-----------------------------------------------------CACCCACAGGCCTTCTCTCTCCTGGCTGCCCGCCCC-ACTCTGCAAAACACACCACGGCAGCCT-TAATCACGTAACTTCTGCTCTGTGCATCTGGGCCTGTCACCCGCTGCCTGGCATCCACATCTACCCCTCCCC--------CCCC---AGGAATAGTGGC s panTro4.chr17 202860 643 + 82630442 AATCACTTTTGAACTATC--AAAAAAGCCCGTCAACTTCACACGATTCACCCCAATATTTATGCCCAGAAGGGGCAATAATCCCACAGGCCAGGCAGGCC--ACGTGCTTCCCCGGGGATCTGTGGGCAGGTCCAT----------------------GAGCACCCGATGGA----TCATTCCCTGTGAGTCCATTGTAACGGGGCCTCTGCTCCGATTC----TCTCCTGCTGTCACTGTAGTCCAGGTGGAAGGTCTAAGAGCTCACCCTGACCATCCAGCATGGCTGGTGAT-CTGGACCAGCGTGAGGAGCAGCAGTTCCTAAG-TCCCAGCATCAGG-GG-ACCGGAGCACACAGGTGTATCACCCAGTACGG-GAGGTGCACCCATGCAGACGTGCATAAAACACACTGTCAGTATTTCTGAAAATGCCTTCCGCAGGGGAGAGCAGGTCTGTTGAGGTGAGGTGCAAAGGACACCAGCTGGGCTGAGCTCTGAGCTGCAACCCT---CACCCCCATGCCAATTTATGCACACACACAGGCCTTCTCTCTCCTGGCTGCCCGCCCC-ACTCTGCAAAACACACCACAGCAGCCT--AGTCACGTGACTTCTGCTCTGTGCATCTGGGCCTGTCACCCGCTGCCTGGCATCCACATCTACCCCTCCCC--------CCC----AGGAATAGTGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 82666 648 + 73212453 AATCATTTTTGAACTATC--AAAAAAGCCCGTCAACTTCATACGATTCACCCTGATATTTATGCCCAGCAGGGGCAATGACCCCACAGGCCAGGCAGGCC--ACGTGCCTCCCCGGGGATCTGTGGGCAGGTCCAC----------------------GAGCACCCGATGGATCAGTCATTCCCTGTGAGTCCATTGTAACGGGGCCTCTGCTCCGATTC----TCTCCTGCTGTCACTGTAGTCCAGGTGGAAAGTCTAAGAGCTCACCCTGACCATCCAGCGTGGCTGGTGAT-CTGGGCCAGCGTGAGGAGCAGCAGTTCCTAAG-TCCCAGCATCAGG-GG-ACCGGAGCACACAGGTGTATCACCCAGTACGG-GAGGTGTACCCATGCAGACGTGCATAAAACACACTGTCAGTATTTTGGAAAATGCCTTCCGCATGGGCGAGCAGGTCTGGTGAGGTGAGGTGCAAAGGACCCCAGCTGGGCTGAGCTCTGAGCTGCAACCCT---CACCCCCATGCCAATTTATACACACCCACAGGCCTTCTCTCTCCTCACTGCCCGCTCC-ACTCTGCAAAACACACCACGGTAGTCT-TAATCATGTGACTTCTGCTCTGTGCATCTGGGCCCATCACCCGCTGCCTGGCATCCACATCTGCCCCTCCCC--------CCC----AGGAATAGTGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 208632 636 - 81552678 AATCGTTTTTGAACTATC---AAAAAGCCCGTCAACTTCATACGATTCACTCCGATATTTATGCCCAGCAGGGGCAATGA-CCCACAGGCCAGGCAGAT--------CCTCCCTGGGGATCTGTGGGCAGGTCCGC----------------------GAGCACCCAATGGATCAGTCATT-CCTGTGAGTCCCTTGTAACGGGGCCTCTGCTCCGATTC----TCTCCTGCTGTCACTGTAGTCCAGCTGGAAGGCCTAAGAGCTCACCCTGACCATCCAGCGCGGCTGGTGAT-CTGGACCAGCGTGAGGACCAGCAGTTCCTAAG-TCCTGGCATCAGG-GG-CCCGGAGCACACAGGTGTGTCACCCAGTACAG-GAGGTGCACCCATGCAGACGTGCATAAAACACAC--TCAGTATTTTGGAAAATGCCTTCCACATGGGAGAGCAGGTCTGGTGAGGTGAGGAGCAAAGGAC-CCAGCTGGGCTGAGCTCCGGGCTGCAACCCT---CACCCCCACGCCAATTTCTGCACACCCACAGGCCTTCTCTCTCCTCGCTGCCCGCCCC-ACTCTGCAAAGCACACCATGGTAGTCT-TAATCACGTGACTTCTGCTCTGTGCATCTGGGCCCATCACCCGCTGCCTGGCCTCCACATCTGCCCCTCCCC--------CCC----AGGAACAGTGGC i nomLeu3.chr19 C 0 M 100 s rheMac3.chr16 117332 678 + 80904711 AATCATTTTTGAACTATA--AAAAAAGCCCATCGACTGCATACGATTCACCCTGATATCTATGCCCAGCAGGGGCAAGGACCCCACAGGCCGGGCAGGCC--ACATTCCTCCCTGGGGATCTGTGGGCAGGTCCATGAGCACCCGACGGATCAGCCACGAGCACCCGACGGATCAGCCATTCCC--TGAGTCCACCGTAACGGGGCCTCTGCTCCGACTC----TCTCGTGCTGTCG-TGTAGTCCAGGGGGAAGGTCTGAGGACTCACCCTGACCACCCAGCGTGGCCGGTGAT-CTGGACCAGCATGAGGAGCAGCAGTTCCTAAG-TCCTAGCATC-GG-GG-ACCGGAGCACACAGGTGTATCAGCCAGTACGG-GAAGTGCACCCGCGCGGACGTGCACAAAACACACTGTCAGTATTTTGGAAAATGCCTTCCGCGTGGGAGAGCAGGTCTGGTGAGGTGAGGTGCAAACGACCCCAGCTGGGCTGAGCTCTGAGCTGCAACCCC---C-CCGCCAGGCCAATCTATGCAAACCCACAGGCCTTCTCTCTCCTCGCGGCCCACCCCCACTCTGAAAAACACACCACGGGAGCCT-TAATCACGTGACTTCTGCTCTGTGCAGCTGGGCCCATCACCCGCTGTCTGGCATCCGCACCTGCCCCTCCCCAGCCCGCTCCCCACAGGGAACAGTGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 123077 678 + 80997621 AATCATTTTTGAACTATA--AAAAAAGCCCATCGACTGCGTACGATTCACCCTGATATCTATGCCCAGCAGGGGCAAGGACCCCACAGGCCGGGCAGGCC--ACATTCCTCCCTGGGGATCTGTGGGCAGGTCCCTGAGCACCCGACGGATCAGCCACGAGCACCCGACGGATCAGCCATTCCC--TGAGTCCACCGTAACGGGGCCTCTGCTCCGACTC----TCTCGTGCTGTCG-TGTAGTCCAGGGGGAAGGTCTGAGGACTCACCCTGACCACCCAGCGTGGCCGGTGAT-CTGGACCAGCATGAGGAGCAGCAGTTCCTAAG-TCCTAGCATC-GG-GG-ACCGGAGCACACAGGTGTATCAGCCAGTAGGG-GAGGTGCACCCGCGCGGACGTGCACAAAACACACTGTCAGTATTTTGGAAAATGCCTTCCGCGTGGGAGAGCAGGTCTGGTGAGGTGAGGTGCAAACGACCCCAGCTGGGCTGAGCTCTGAGCTGCAACCCC---C-CCGCCAGGCCAATCTATGCAAACCCACAGGCCTTCTCTCTCCTCGCGGCCCGCCCCCACTCTGAAAAACACACCACGGGAGCCT-TAATCACGTGACTTCTGCTCTGTGCGGCTGGGCCCATCACCCGCTGTCTGGCATCCGCACCTGCCCCTCCCCAGCCCGCTCCCCACAAGGAACAGTGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 121539 675 + 74645514 AATCATTTTTGAACTATG--AAAAAAGCCCATCGACTGCGTACGATTCACCCTGATATCTATGCCCAGCAGGGGCAAGGACCCCACAGGCCGGGCAGGCC--ACATTCCTCCCTGGGGATCTGTGGGCAGGTCCAT------CCGACGGATCAGCCA-GAGCACCCGACGGATCAGCCATTCCCTGTGAGTCCACCGTAACGGGGCCTCTGCTCCGACTC----TCTCGTGCTGTCG-TGTAGTCCAGGTGGAAGGTCTGAGGACTCACCCTGACCACCCAGCGTGGCCGGTGAT-CTGGAGCAGCATGAGAAGCAGCAGTTCCTAAG-TCCTAGCATC-GG-GG-ACCGGAGCACACAGGTGTATCAGCCAGTATGG-GAGGTGCACCCATGCGGATGTGCACAAAACACACTGTCAGTATTTTGGAAAATGCCTTCCGCGTGGGAGAGCAGGTCTGGTGAGGTGAGGTGCAAACGACCCCAGCTGGGCTGAGCTCTGAGCtgcaacccc-cac-cccccaggcCAATCTATGCAAACCCACAGGCCTTCTCTCTCCTCGATGCCCGCCCCTACTCTGCAAAACACACCTCGGTAGCCT-TAATCACGTGACTTCTGCTCTGTGCATCTGGGCCCATCACCCGCTGTCTGGCATCCacacctgcccctccccagcccgcTCCCCACAGGGAACAGTGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 109821 660 + 75148670 AATCATTTTTGAACTACA--AAAAAAGCCCATCGACTGCGTAGGATTCACCCTGATATCTATGCCCAGCAGGGGCAAGGACCCCACAGGCCGGGCAGGCC--ACATTCCTCCCTGGGGATCTGTGGGCAGGTCCAT----------------------GAGCACCCGACGGATCAGCCATTCCTTCTGAGTCCATCGTAACGGGGCCTCTGCCCCAACTC----TCTCGTGCTGTCGCTGGAGTCCAGGTGGAAGGTCTGAGGACTCACCCTGACCACCCAGCGTGGCCGGTGAT-CTGGACCAGCATGAGGAGCAGCAGTTCCTAAG-TCCTAGCCTC-GG-GG-ACCGGAGCACACAGGTGTATCAGCCAGCACGG-GAGGTGCACCCATGCGGACGTGCACAAAACACACTGTCAGTATTTTGGAACATGCCTTCCGCATGGGAGAGCAGGTCTGGTGAGGTGAGGTGCAAACGACCCCAGCTGGGCTGAGCTCTGAGCTGCAACCCC---CACCCCCAGGCCAATCTATGCACACCCACAGGCCTTCTCTCTCCTCGCTGCCCGCCCCCACTCTGCAAAACACACCACGGTAGCCT-TAATCACGTGACTTCTGCTCTGTGCATCTGGGCCCCTCACCCACTGTCTGGCATCCACATCTGCCCCTCCCCAACCCGCTCCCCACAGGGAACAGTGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 924375 641 - 1291538 AACCATTTTTGAACTATATAAAAAAATCCCATCAACCTCATACAGTTCACCCCAACATTTACACTCAGCAGGGGCAATGGCCCCACCGGCCTGCCAGGCC--ATGTTGCTCCCC-GGGATCCGTGGGCTGGGCCAC----------------------GAGCACCCGGCAGATCAGTCACTCGCTGTGAGTCCACCGTGATGGGGCCTCTGCTCTGATTC----CCTCCTGCTGTCACTGAGGTCCAGGTGGAGGGTCTGAGGGCTCACCCTGACCGCCCAGCATGGCCAGTGAT-CTGGACCCGCATGAGCAGCAGTAGGTCCTGAG-TCCCAGCACTGGGTGG-ACCAGAGCACACAGATTTGTCACCTGGTATGG-GAGGTGCACCCAC-CAGACATGCATAAAACACACTGTTGGTATTTTGGAAAATGCCTTCCACAGGGGAGAGCAGGTCTGGGGAAGTGAGGTGCAAAGGACCTCAGCTGGGCTGAGCTCTGAGCTGCAATCCC---CACCGCCATGCCAATGCATGCACAC-CACAGAC-----CTCTCCTCAATGCCTGCCCTTATGCTGCAAAACACACAACAGTTGTCT-TCATCACGTGCCTTCTGCTCAGTGCATCTGGGCCCATCACCCGCCACCTGGCATCCATGTTTGCCCCTCCCC---------------AGAAACTGTGGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75858389 529 + 122082543 -------------CTATA--TAAACCTTATATCAACTTTTT---------CCCAGCATCTATGCCCA-CACGCACAA---CCCTCTAGGCCAGCCAAGCT---TGAGTCTCCCCAGGACTCAGTGGGCAGGTCTGT----------------------GGCTAGCTAACGGGAC-GTCATTCC---TGAG------------------------AGATTC------------------TGTCATCCAGGTGGATGGTCCCATGGCTTATCCTG-CCACTCAGAATGGTTGGGATA-CTGGACTAGTGTGGGGAGAGGCAATTCCTAAGCTCCCCTCCCCAGA-GG-GTC----CACACAGGTTTGTCACTCAGCACAG-GAGGTGTGCCTGCGCACACGTCCACCAAACACATTGTCAGGGTTTTGAGAATCACCTTTCACATGACTGAACAGGCCTGCTGAGGTGAGTGG--------------TGGGGTGG-----------------------CATCCGTGCCTGACCATGCACATC--CTGACCTTCTCTTGCCTTGGTGAA-GCCCG-ACTCTACAACCTGCCCAACAATGGCTTCCAATCATGTGACTTCTGCCC---ATGCCCATGCCCATCACTCACAGCACTGC-----CACTTGCCCCCTCCC--------C------AAGGATAGGGTC i mm10.chr11 C 0 C 0 s canFam3.chr9 15683578 616 - 61074082 GATCATTTTTTATCTATA---AATCCTCCCATCAGGTTCATATAATTCATTCTGATATTTATACTCAGCA-GGGCAATGACCCCATGGGGTTGCCAGGCCTGCAGCACCTCCCTGG-------------GGCCCAG----------------------GA----------GGTCAGTCATTCTACCTGAGTCCATGGTCATGGGGCCTGGGGTCTGCCTCCTTCTCTCCCGTTGGCACGGTGGTCCAGGCAGAAGGACCAAGA-------CTGA--GACCAGAAAGGCCCATGGTCCTGGACCAGCTTGAGGAGCTGCAGTTCCTGAG-ACCCCACTGTAGG-GGTACTGGAGCACACAGGTAGG---GCCAATATGGAGGGGCCCTCCTGGGTAGGAGTGCATGAAACA------TGGTGTTTTGGAAACTGCCTTCCCCATGGGAGAGCAGGACTGCTGAGGTGAGGCATAAGGGACCCCAGCTGGGCTGAATTCTGAGCTGCCACCCCTCTTCCCTTCATGTCAATCCATGGCCATCCTCAGACCTTCTCTAGCCTTGCTGCCCATTCC-ACCCTGCAAAATGCACAACTGTAGCTTTTAATCACATGATGTCTGCTCTGTGCATCCAGGCCTATCACCCACTGCATGGC-CCAACACCCAGCCACCTCT--------CC-----AAGAACAGTAGC i canFam3.chr9 C 0 C 0 a score=520878.000000 s hg38.chr17_GL383563v3_alt 228058 168 + 375691 AGGAAAAGCCCTCGTGGGAAT-TAACCCCA------------GGCC--ACCCCGCAGATTGAAAATCAGTTACTTTCTGGAGAAGCCGAGCAACTCTGCAAAACCCTACTCGGCTCCCCACGCGTGGTTTGCTGTGATAAGGCCGGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA s panTro4.chr17 203503 178 + 82630442 AGGAAAAGCCCTCGTGGGAAT-TAACCCCA-CCC-CACCCCAGGCC--ACCCCGCAGATTGAAAATCAGTTACTTTCTGGAGAAGCCAAGCAACTGTGCAAAACCCTACTCGGCTCCCGACGTGTGGTTTGCTGTGATAAGGCCGGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 83314 178 + 73212453 AGGAAAAGCCCTCGTGGGAAT-TAACCCCA-CCC-CACCCCAGGCC--ACCCCGCAGATTGAAAATCAGTTACTTTCTGGAGAAGCCGAGCAATTCTGCAAAACCCTACTCGGCTCCCCACGTGTGGTTTGCTGTGATAAGGCCGGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 118010 179 + 80904711 AGGAAAAGCCCTTGAGGGAAT-TAACCCCTGCCC-CACCCCAGGCC--ATCCCCCAGATTGAAAATCAGTTCCTTTCTGGAGAAGCCGGGCAATTCTGCAAAACCCTACTCGGCTCCCCACGTGTGGTTTGCTGTGATAAGGCCGGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 123755 179 + 80997621 AGGAAAAGCCCTTGAGGGAAT-TAACCCCCGCCC-CACCCCAGGCC--ATCCCCCAGATTGAAAATCAGTTCCTTTCTGGAGAAGCCGGGCAATTCTGCAAAACCCTACTCGGCTCCCCACGTGTGGTTTGCTGTGATAAGGCCGGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 122214 180 + 74645514 AGGAAAAGCCCTTGTGGGAAT-TAAcccccccccGCACCCCAGGCC--ATCCCACAGATTGAAAATCAGTTCCTTACTGGAGAAGCCGAGCAATTCTGCAAAACCCCACTCGGCTCCCCACGTGTGGTTTGCTGTGATAAGGCTGGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 110481 179 + 75148670 AGGAAAAGCCCTTGAGGGAAT-TAACCCCCACCC-CACCCCAGGCC--ATCCCCCAGATTGAAAATCAGTTCCTTTCTGGAGAAGCCGAGCAATTCTGCAAAATCCTACTCGGCTCCCCACGTGTGGTTTGCTGTGATAAGGCCGGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 925016 178 - 1291538 AGGCAAAGGCCTGGTGGGAAT-TAACCCCA-CCC-CACCACAGACC--ATCCCACTGATTGAAAATCATCTACTTTCTGGAGAAGCTGAGCAATTCTGCAAAACTCTACTCGGCTCCCCACGTGTGGTTTGCTGTGATAAGGCCAGCAAAGCAGCCAGCCTTGAAAATCCCATTTAATGAGAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75858918 180 + 122082543 AGGACAAGCCCTCCTCGAAGTCTAACCCCCACCC-TGGGGGGGGTCGAGGCCCACAGATGGGAGAACA-CTCCCCTCTTGGGAAGCTGAG-AGTGCTGTACAGCTGCACTCTGTTCTCCATGTGTGGTTTGCCGTGATAAGGCCAGCAAAGCAGCCAGCCTTGAAAATGCCATTTAATGAGAA i mm10.chr11 C 0 C 0 s canFam3.chr9 15684194 143 - 61074082 ------------------------------------AAGAAATGCC---CTCCACAGATTGGAAAACCTTCACTTTCTAGTGAAGCTGTGGGA-TCTGCAAAACCCTAGTTGGCTCCTCATGTGTGGTTTACTGTGATAAGGCCAGCACAACAGCCAATCTTGAAAATGCCATTTAATAAGAA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 209268 100 - 81552678 M a score=229250.000000 s hg38.chr17_GL383563v3_alt 228226 76 + 375691 AAGACCCACA--GCCG--CCGTGGC------------------GGTG-------------GCCGGGGTGTCCGGCAGCAGTAAAC------------------GCT-CCTGGTACCGCTGCTCGCCCTGC s panTro4.chr17 203681 76 + 82630442 AAGACCCACA--GCCG--CCGTGGC------------------GGTG-------------GCCGGGGTGTCCGGCAGCAGTAAAC------------------GCT-CCTGGTACCGCTGCTCGCCCTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 83492 81 + 73212453 AAGACCCACA--GCCAGTCGGTGGC---------------CGGGGTG-------------TCCGGCGTGTCCGGCAGCAGTAAAC------------------GCT-CCTGGTACCGCTGCTCGCCCTGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 209368 76 - 81552678 AAGACCCACA--GCCG--CCATGGC------------------GGTG-------------GCCGGGGCGTCCGGCAGCAGTAAAC------------------GCT-CCTGGTACCGCTGCTCTCCCGGC i nomLeu3.chr19 M 100 C 0 s rheMac3.chr16 118189 76 + 80904711 AAGACCTACA--GCCG--CCATGGC------------------AGTG-------------GCCGGGGCGTCCGGCAGCAGTACAT------------------GCT-CCTGGTGCTGCTGCTCTCCCTGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 123934 76 + 80997621 AAGACCTACA--GCTG--CCATGGC------------------AGTG-------------GCCGGGGCGTCCGGCAGCAGTACAT------------------GCT-CCTGGTGCTGCTGCTCTCCCTGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 122394 76 + 74645514 AAGACCTACA--GCCG--CCATGGC------------------AGTG-------------GCCGGGGTGTCCGGCAGCAGTAAAT------------------GCT-CCTGGTGCTGCTGTTCTCCCTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 110660 76 + 75148670 AAGATCTACA--GCCG--CCATGGC------------------AGTG-------------GCCGGGGTGTCCGGCAGCAGTAAAT------------------GCT-CCTGGTGCTGCTGCTCTCCCTGC i chlSab2.chr16 C 0 I 4 s calJac3.chrUn_GL286409 925194 93 - 1291538 -AAGCCCACA--GCCA--CCACGGC------------------AGTG-------------GCCTGGGTGTCCGGCAGCAGCAAACACTCCTGGCACAGCAAATGCT-CCTGGTGCTGCCGCCCTCCCTGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75859098 103 + 122082543 AAGACCCACGCTGCTG--CCATGGTGCTTAtgtgtgtgtgttgagtgtgtatgtgtgtgtgGGGGGGAGTCTGGCTGCATTTAAT------------------GCTCCCTGGTACCACTGCTT------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15684337 69 - 61074082 AAGACCCACACAGCCG--CCATGGC------------------ACTC-------------ACAGGAGTGGCCAGCAGCATTAAAT------------------CCT-CCCCATAGCACTGC--------- i canFam3.chr9 C 0 C 0 a score=8217.000000 s hg38.chr17_GL383563v3_alt 228302 16 + 375691 TCTGTGCTCCGCTTCC s panTro4.chr17 203757 16 + 82630442 TCTGTGCTCCGCTTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 83573 16 + 73212453 TCTGTGCTCCGCTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 209444 16 - 81552678 TCTGTGCTCTGCTTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 118265 4 + 80904711 TCGG------------ i rheMac3.chr16 C 0 C 0 s macFas5.chr16 124010 4 + 80997621 TCGG------------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 122470 4 + 74645514 TCGG------------ i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 925287 16 - 1291538 CTTGTGCTCCGCTCCG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75859201 14 + 122082543 --TGTGCTGGGTTTCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15684406 16 - 61074082 TTTGTGCTCTGCTTCA i canFam3.chr9 C 0 C 0 e chlSab2.chr16 110736 4 + 75148670 I a score=660156.000000 s hg38.chr17_GL383563v3_alt 228318 164 + 375691 AGGTTTGCATTACGGTTTCAGCTCACGGCCAATCTGACTGCAGATTCTCATGGATATTCGCCAAGCTGTTCCCAGGGAATTTTAATTACCATGATAACAATTGCTAATCACTGGCATTTCCTAAGTGGTTGTGGCTGGAGAAGGTGGTAATTGTCAGGCTGGTG s panTro4.chr17 203773 164 + 82630442 AGGTTTGCATTACGGTTTCAGCTCACGGCCAATCTGACTGCAGATTCTCATGGATATTCGCCAAGCTGTTCCCAGGGAATTTTAATTACCATGATAACAATTGCTAATCACTGGCATTTCCTAAATGGTTGTGGCTGGAGAAGGTTGTAATTGTCAGGCTGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 83589 164 + 73212453 AGGTTTGCATTAGGGTTTCAGCTCACGGCCAATCTGACTGCAGATACTGATGGATATTCGCCAAGCTGTTCCCAGGGAATTTTAATTACCATGATAACAATTGCTAATCACTGGCATTTCCTAAATGGTTGTGGCTGGAGAAGGTGGTAATTGTCAGGCTGGTG i ponAbe2.chr17 C 0 I 2973 s nomLeu3.chr19 209460 164 - 81552678 AGGTCCGCATTCCGGTTTCAGCTCACGGCCAGGCTGACTGCAGACACTGATGGATATGCGCCAAGCCGTTCCCAGGGAATTTTAATTACCATGATAACAATTGCTAATCACTGGCATTTCCTAAATGGTTGTGGCTGGAGAAGGTGGTAATCCTCAGGCTGGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 118269 161 + 80904711 GGGTGTGCATCACCGTTTCAGCTCACGGCCAATCTGACTGCAGATACGAATGGATATTCGCCCAGCTGTTCCCAGGGAATTTTAATTACC---ATAACAATGGCTAATCGCTAGCATTTCCTAAACGGTTGTGGCTGGAGAAGGTGGTAATTGTCAGGCTGGCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 124014 161 + 80997621 GGGTGTGCATCACCGTTTCAGCTCACGGCCAATCTGACTGCAGATACGAATGGATATTCGCCCAGCTGTTCCCAGGGAATTTTAATTACC---ATAACAATGGCTAATCGCTAGCATTTCCTAAACGGTTGTGGCTGGAGAAGGTGGTAATTGTCAGGCTGGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 122474 161 + 74645514 GGGAGTGCATCACCGTTTCAGCTCACGGCCAATCTGACTGCAGATACGAATGGATATTCGCCCAGCTGTTCCCAGGGAATTTTAATTACC---ATAACAATGGCTAATCGCTAGCATTTCCTAAATGGTTGTGGCTGGAGAAGGTGGTAATTGTCAGGCTGGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 110740 161 + 75148670 AGGTGTGCATCACCGTTTCAGCTCACGGCCAATCTGACTGCAGATACTAATGGCTAGTCGCCCAGCTGTTCCCAGGGAATTTTAATTACC---ATAACAATGGCTAATCACTAGCATTTCCTAAATGGTTGTGGCTGGAGAAGGTGGTAATTGTCAGGCTGGTG i chlSab2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 925303 164 - 1291538 AGGTTTGCATTACGGTTTCAGCTCACGGCCAATCCGACTGCAGATACTGATGGATATTCGCCAAGCTGTTCCCAGGAAATTTTAATTACCATGATAACAATTGCTAATCACTGGCATTTCCTAAGCGGCTGTGGCTGGAGAAGGTGGTAATTGTCAGGCTGGTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75859215 163 + 122082543 AGGTTTTTGTTACCATTTCAGCTCACAGCCAACCTGACTACAGATATTGATGGATATTAGCCAAGATGTTCCCAGGGAATTTTAATTACCACAATAACAATCACTAGTCAC-AGCATTTCCTAAACAGCAGTGGCAGGAGCAGGTGGTAATTGCCCAGGCTCTG i mm10.chr11 C 0 C 0 s canFam3.chr9 15684422 157 - 61074082 AGGTTTTCATTAGGATTTCAGTTCACAGCCAACCTGACTGC------TGATGGATATTAGCCAAGCCGTTCCCAGGGAATTTTAATTACCATGATAACAATTGCTAATCATTGGCATTTCCTAAATGGCTGTGGCTGGAGAAGGTGGTGATTGCCAGGCCCCA- i canFam3.chr9 C 0 C 0 a score=2076185.000000 s hg38.chr17_GL383563v3_alt 228482 730 + 375691 CTGGAAAGAAGGGG--AGTCTCACAG----------------ACCTGCCACTGGAGGGGGTGGGACAGGG-GAGCCTGAAGACCCCTCTCTCTGTCCATTGT-CCACCCCTTCCATGTGTCACTCCCT--------CTCCCGTGCCACCCTGAGAGTGCACCTGGCTTGAGCTC-----------TTCACTGGCCCAGGCATCCATCCTCTCTGC-CCCAACCCCACGAGTCACAGCAGGGG-ACGGTC-TGTGgcctgtgcacctgctgttccttccccctggagtgcctttcatcag----catctctaac--aggcagtcacgcttcccc---ggagggcttcagtgggtgccccttcatgcagaatcagggcccctctgtcgtgctcccagaggccatgtggtcccactggtacagcacgccacacctgggctggagctcagactcgcccac------------------------------------------------------------------------------------------------cttcctgagcagg-----------------aggctg---------------------------------------------------------------------------------------------------tgagctcttcaagggcagggctgtgcctgagccatctctggattcccgggacccagTGAGGAGCCTGC----------TATGTTACTGACCGACCA--------CATGAACAAAGAAGGGA----AAGCAGAGGCACTGTCTCCAGGGGACAGAG-GGGAGACCTCGCCTTCAAGGGAGACTGCGTTCTGTCTGCCTAACAAGCTCCAGACTGAATCAGTCTTGGAGAACCACGGGAAAAGACCTGTGA-------------------------------------------------------------------------CTGAGCGGTCTTCTCAATTACACTGCAGCTACTTT---AAAGGTCTCTTCAAGGGTCAACCCTCTCTGGCAGAGGAGAGGCAG s panTro4.chr17 203937 730 + 82630442 CTGGAAAGAAGGGG--AGTCTCACAG----------------ACCTGCCACTGGAGGGGGTGGGACAGGG-GAGCCTGAAGACCCCTCTCTCTGTCCATTGT-CCACCCCTTCCATGTGTCACTGCCT--------CTCCCGTGCCACCCTGAGAGTGCACCTGGCTTGAGCTC-----------TTCACTGGCCCAGGCATCCAACCTCTCTGC-CCCAACCCCATGAGTCACAGCAGGGG-ACGGCC-TGTGgcctgtgcacctgctgttccttccccctggagtgcctttcatcag----catctctaac--aggcagtcacgcttcccc---ggagggcttcagtgggtgccccttcatgcagaatcagggcccctctgtcgtgctcccagaggccatgtggtcccactggtacagcacgccacacctgggctggagctcagactcgcccac------------------------------------------------------------------------------------------------cttcctgagcagg-----------------aggctg---------------------------------------------------------------------------------------------------tgagctcttcaagggcaaggctgtgcctgagccatctctggattcccgggacccagTGAGGAGCCTGC----------TATGTTACTGACCGACCA--------CATGAACAAAGAAGGGA----AAGCAGAGGCACTGTCTCCAGGGGACAGAG-GGGAGACCTCGCCTTCAAGGGAGACTGCGTTCTGTCTGCCTAACAAGCTCCAGACTGAATCAGTCTTGGAGAACCACGGGAAACGACCTGTGA-------------------------------------------------------------------------CTGCGCGGTCTTCTCAATTACACTGCAGCTACTTT---AAAGGTCTCTTCAAGGGTCAACCCTCTCTGGCAGAGGAGAGGCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 86726 737 + 73212453 CTGGAAAGAAGGGG--AGTCTCACAG----------------ACCTGCCACTGGAGGGGGTGGGGCGGGG-GAGCCTGAAGACCCCTCTCTCTGTCCATTGCGCCACCCCTTCCATGTGTCACTCCCT--------CTCCCGTGCCACCCTGGGAGTGCACCTGGCTTGAGCTC-----------TTCACTGGCCCAGGCGTCCAACCTCTCTGC-CCCAGCCCCACGGGTCAGAGCAGGGG-ACGGTC-TGTGgcctgtgcacctgctgttccttccccctggagtgcctttcatcgg----catctctaac--aggcagtcacgcttccccct-ggaggccttcagtgggtgccccttcgtgcagaatcagggcccctctgtcgtgctcccggagaccatgtggtcccactggtacagcacgccacacctggcctggagctcagacgcgcccac------------------------------------------------------------------------------------------------cttcctgagcagg-----------------aggctg---------------------------------------------------------------------------------------------------tgagctcttcaagggcagggctgagcctgagccatctctggattcccaggacccagTGAGGAGCCTGC----------AGTGTTGCTGACCAACCA--------CATGAACAAAGAAGGGA----AAGCAGAGGCACCGTCTCCAGGGGACAGAA-GGGAGACCTCGCCTTCAAGGGAGACTGTGTTCTCTCTGCCTAACAAGCTCCAGACTGAACCAGTCTTGGAGAACCACGGGAAATGCCCTGTGA-------------------------------------------------------------------CTGAGGCTGAGCGGTCTTCTCAATTATACTGCAGTTACTTT---AAAGGTCTCTTCAAGGGTCAACC--CTCTGGCAGAGGAGAGGCAG i ponAbe2.chr17 I 2973 C 0 s nomLeu3.chr19 209624 707 - 81552678 CTGGAAGGAGGGGG--AGTCTCACAG----------------ACCTGCCACTGGAGAGGGTGGGGCAGGGCGAGCCTGAAGAACCCTCTCTCTGTCCATCACTCCCCCCCTTCCGTGTGTTACTCCCT--------CTCACGTGCCACCCTGAGAGTGCACCTGGCTTGAGCTC-----------TTCACTGGCCCAGGCGTCCAACCTCTCTGC-CCCAGCCCCACGGGACACAGCAGGGG-ACGGTC-TGTGGCCTGTGCACCTGCTGTTCCTTCCCCTTGGAGTGCCTTTCATCGG----CATCTCTAAC--AGGCAGTCACGCTTCCCC-T-GGAGGCCTTCAGTGGGTGCCCCTTCGTGCAGAATCAGGGCCCCTCTGCCGTGCTCCCGGAG-CCATGTGGTCCCACTGGTACAGCACGCCACGTCTGGGCTGGAGCTCAGACTCACCTAC------------------------------------------------------------------------------------------------CTTCCTGAGGAGG-----------------aggctg---------------------------------------------------------------------------------------------------tgagctcttcaagggcagggctgtgcctgagccatctccggcttcccgggacccagTGAGGAGCCTGC----------TGTGTTACTGACGGACCA--------CATGAATAAAGAAGAGA----AAGCAGAGGCGCTGTCTCCAGGGGACAGAC-GGGAGACCTCGCCTTCAAGGGAGACTGCGTTCTCTCTGCCTTACAAGCTCCAGACTGAACCAGCCTTGGAGAACCAGGGGAAACGACCTGTGA-------------------------------------------------------------------------CAGAGAGG-CTTCTCAGTTATACTGCGGTTACTTT---AAAGGTCTCTTCAAGGGT------------------------CAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 118430 726 + 80904711 CTGGAAAGAA---G--AGTCTCACGG----------------ACCTGCCACCCGAGAAGGTGGGGCAGGGGGAGCCTGAAGACCCCTCTCTT--TCCATTGCTCCACCCCTTCCATGTGTTACTCCTT--------CTCCCACGCCACCCTGAGAGTGCACCTGGCTTGAGCTCAGGCGAGCCTATCCACTGGCCCCGGGGTCCAAC--CTCTGC-CCCAACCCCACGGGTCAGAGCAGGGG-ACGGTC-TGTGgcctgtgcacctgctgttcctttcccctggagtgcctttcatcgg----catctctaac--aggcagccgcgcttcccc-t-ggaggccttcagtgggtgccccttcgtgcagaatcagggtccctctgccacgctcctggaggccatgtggtcccactggcacagcacgccacgcccgggctggagct--gactcacctac------------------------------------------------------------------------------------------------cttcctgagcagg-----------------aggctg---------------------------------------------------------------------------------------------------tgagctcttcaagggcagggccgtgcctgagccatctccggattcccgggacccagTGAGGAGCCTGC----------TTTGTTACTGACTGGCCA--------CATGGACAACGAAGGGC----AAGCAAAGGTACTGTCTCTGGGGGACAGAG-GGGAGACCTTGCCTTCGAGGTAGACTGTGCTCTGTCTGCCTA--AAGCTCCAGACTGAACCAGTCTTGGAGAACCACGGGAAA-GACCTGTGA-------------------------------------------------------------------------CACAGCGGTCTTCCCGTTTATACTGCGG-----TG---AAAGATCTCTTCAA-GGCCAACCCTCTCGGGCAGAGCAGAGGCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 124175 728 + 80997621 CTGGAAAGAA---G--AGTCTCACGG----------------ACCTGCCACCCGAGAGGGTGGGGCAGGGGGAGCCTGAAGACCCCTCTCTT--TCCATTGCTCCACCCCTTCCATGTGTTACTCCTT--------CTCCCACGCCACCCTGAGAGTGCACCTGGCTTGAGCTCAGGCGAGCCTATCCACTGGCCCCGGGGTCCAAC--CTCTGC-CCCAACCCCACAGGTCAGAGCAGGGG-ACGGTC-TGTGGCCTGTGCACCTGCTGTTCCTTTCCCCTGGAGTGCCTTTCATCGG----CATCTCTAAC--AGGCAGCCGCGCTTCCCC-T-GGAGGCCTTCAGTGGGTGCCCCTTCGTGCAGAATCAGGGTCCCTCTGCCACGCTCCTGGAGGCCATGTGGTCCCACTGGCACAGCACGCCACGCCCGGGCTGGAGCT--GACTCACCTAC------------------------------------------------------------------------------------------------CTTCCTGAGCAGG-----------------aggctg---------------------------------------------------------------------------------------------------tgagctcttcaagggcagggccgtgcctgagccatctccggattcccgggacccagTGAGGAGCCTGC----------TTTGTTACTGACTGGCCA--------CATGGACAACGAAGGGC----AAGCAAAGGTACTGTCTCCGGGGGACAGAG-GGGAGACCTTGCCTTCGAGGTAGACTGTGCTCTGTCTGCCTAACAAGCTCCAGACTGAACCAGTCTTGGAGAACCACGGGAAA-GACCTGTGA-------------------------------------------------------------------------CACAGCGGTCTTCCCGTTTATACTGCGG-----TG---AAAGATCTCTTCAA-GGCCAACCCTCTCGGGCAGAGCAGAGGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 122635 721 + 74645514 CTGGAAACAA---G--AGTCTCACGG----------------ACCTGCCACCCgagagggtggggcagggggagccTGAAGACCCCTCTCTT--TCCATTGCTCCACCCCTTCCATGTGTTACGCCTT--------CTCCCACGCCACCCTGAGAGTGCACctggcttgagctcaggtgagCCTATCCACTGGCCCCGGGGTCCAAC--CTGTGC-CCCAGCCCCACGGGTCAGAGCAGGGG-ACGGTC-TGTGGCCTGTGCACCTGCTGTTCCTTTCCGCTGGAGTGCCTTTCATCGG----CATCTCTAAC--AGGCAGCCGCGCTTCCCC-T-GGAGGCCTTCAGTGGGTGCCCCTTCGTGCAGAATCAGGGTCCCTCTGCCACACTCCTGGAGGCCATGTGGTCCCACTGGCACAGCACGCCACGCCCGGGCTGGAGCT--GACTCACCTAC------------------------------------------------------------------------------------------------CTTCCTGAGCAGG-----------------AGGCTG---------------------------------------------------------------------------------------------------TGAGCTCTTCAAGGGCAGAGCCGTGCCTGAGCCGTCTCCGGATTCCCGGGACCCAGTGAGGAGCCTGC----------TTTGTTACTGACCGGCCA--------CATGGACAACGAAGGGC----AAGCAAAG-----GTCTCCAGGGGACAGAG-GGGAGACCTTGCCTTCGAGGTAGACTGCG--CTGTCTGCCTAACAAGCTCCAGACTGAACCAGTCTTGGAGAACCACGGGAAA-GACCTGTGA-------------------------------------------------------------------------CACAGCGGTCTTCCCGTCTATACTGCGG-----TG---AAAGATCTCTTCAA-GGCCAACCCTCTCGGGCAGAGCAGACGCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 110901 731 + 75148670 CTGGAAAGAA---G--AGTCTCACGG----------------ACCTGCCACCAGAGAGGGTGGGGCAGGGGGAGCCTGAAGACCCCTCTCTT--TCCATTGCTCCACCCCTTCCATGTGTTACGCCTT--------CTCCCACGCCACCCTGAGAGTGCACCTGGCTTGAGCTCAGGTGAGCCTATCCACTGGCCCCGGGGTCCAACCTCTCTGC-CCCAGCCCCACAGGTCAGAGCAGGGG-ACGGTC-TGTGGCCTGTGCACCTGCTGGTCCTTCCCCGTGGAGTGCCTTTCATCGG----CATCTCTAAC--AGGCAGCCACGCTT-CCC-T-GGAGGCCTTCAGTGGGTGCCCCTTTGTGCAGAATCAGGGCCTCTCTGCCCCGCTCCTGGAGGCCATGTGGTCCCACTGGCACAGCACGCCACGCCCAGGCTGGAGCT--GACTCACCTAC------------------------------------------------------------------------------------------------CTTCCTGAGCAGG-----------------aggctg---------------------------------------------------------------------------------------------------tgagctctcaaagggcagggccgtgcctgaaccatctccggattcccgggacccagtaAGGAGCCTGC----------TTTGTTACTGACTGGCCA--------CATGGACAACAAAGGGC----AAGCAAAGGTACTGTCTCCGGGGGACACAG-GGGAGACCTTGCCTTCGAGGTAGACTGCGCTCTGTCTGCCTAACAAGCTCCAGACTGAACCAGTCTTGGAGAACCACGGGAAACGACCTGTGA-------------------------------------------------------------------------CACAGCAGTCTTCCCGTTTATACTGCGG-----TG---AAAGATCTCTTCAAGGGCCAACCCTCTCGGGCAGAGCAGAGGCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 925467 751 - 1291538 CTGGAAAGAAGGGA--AGTCTCAGGGATCTGCCACTGGAGGAATCTGCCACTGGAGGAAGTGGTGCAGGGGGAGCCTGAAGACCCTTCTCTG--TCCATTGCTCCACCCCTTCCTCATATTACAACTT--------CTCCCATGCCACCCCGAGAGTGCACCTGGCATGAACTCAAGCAAGCCTCTTCACTGGCCCAGGCATCCAACCTGTCTGC-CCCAGCCCCACAGGTCAGAGCAGGTA-ATGGTC-TGTGGCCTGTACA-CTGCTGTTCCTTTCCC--GGAGTGCCTTTCATCAG----CATCTCAAAC--AGGCAGCCACGCCTCCCC-T-GGA-TCCTTCAATGAATGCCCCTTCATGCGAA--TGGGGCCCCTCCATCATATTCCCGGATGCTACGTGGTCCCGCTCGCGCAGCACGCCACACCTGGGCTGGAGCTCAGACTCACCCAC------------------------------------------------------------------------------------------------CTTCCTGAGTAG-------------------GGCTG---------------------------------------------------------------------------------------------------TGAGCTCTTCCAGCTCAGGTCTGTGCCTCAGCCATCTCTGGATTCCCGGGACCCTGCAAGGAGCCTGC----------TGTGCTACTTACTGGCCA--------CATGAACAAACAAAGGCGGCGAAGCAAAGGC-CTGTCTCCA-GAGACAGAG-GTGAGACTGTGCCTTCAAGA-AGACTGCGTTCTGTCTGCCTAACAAGCTCCAGACTGAATCAGTCTTGAAGAACTGCGGGAAACAGCCTGTGA-------------------------------------------------------------------------CAGGGTGGTCTTCTCATTTATACTGCGGATACTTT---AAAGGGCTCTTCAAAGGCCAACCCTCTCCAGCCGAAAAGAGGCAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75859378 881 + 122082543 GTGGAAGGAAGGGGACAGTCTAGGGA----------------AGTGACTGTTGGCAAGGATGGAAGAAGG-GAGGCTGAGAACCCCGGGCTG--CCCATTGCTTAGCCCTTCACTGGTATGAC-CTGG--------GTTACATATCTC------AGTGTTCCTGGC--GAGTCTCACTGAC----TTCACTGGCTT----ACCCATACTCTCTGCGCCTCATCCCACAAATAA----AGGGG-ATGGCTGTCTGGCCTTTGCATATGCTGTTCCTAACAGTTGTAGTATCTGCAACCAGGTCTCCCTCCCATG--AGGCATCCACATTCCCCT-G-GGAAGTC----GTTCATGCCAGATCTTGCAGAATCAAGGCCCCTTTGCTCTGCTTCCA-AGGCCGTAGGATACCACTGGGACAG---GTCATCGCTAGGCTGGAGTTCACGCTTGTCTATTGTTTGTCTGTCTGCCCCCGGCCCCCGACCCCTGATACCCTGTGTGTCTGTCTCTGTCTTTGTCtctattcctttgagataggtctcactgtgtagctctctggccaggaacttgctatcaagaccaggctggcctcaaactccgagatctgcctgcctcggcctcctgagtgtgccgattaaaggtgtgtgccttcatgtgcagctTTGTACATTCTTTGACTGGGCCGCTGAGCTCTTCAAGGGCAAGGCTGTGCCTGAGCCGTCCCC---------GAACCTTGTGAGGAATCCAC----------TATGTGAGTGGTCAACAG--------AACGAACAGATAAAGCA----CAGCAAA-----------CAAAGCATGG-------------GCCTTCAAGGGGAAC---ATTCTGCCTGCTGCACAAGCTCCAGGCTGATTCAGCCTCGAA-AGCAACAGGAAATGACCTGTGA-------------------------------------------------------------------------CAATATGATCCTTT---TTATGCTGTGG---------------TCACTTTAAAGGTCTACCTGCTATGGTGGAGGAGAGTTGG i mm10.chr11 C 0 I 187 s canFam3.chr9 15684579 735 - 61074082 TTGGGAAGAAGAGG--ATCCTAGGGG----------------ACCAGTCACTGAGGAGGGTGGGCAAAGGACAGCCC-AAGACCTCTGTCCTTGCCCACTGCCCCACCCCTTCTGAATGTTACCACCTCTTCTTGCCTCCCAAGCAACTCTG-GAATGCACCTG-----------------------CACAGATTCAGG----CAAGAAGTCCAC-ACC-------TGGGTCGGAGCAGGGGTACAGTT-TGCAGActttgcacatgctgttccttctacttgtgatgcccttcatcct----catctcccaccAAGACTGTGACACTGCCCC-TAGGAAGTCTTCTG----TGCCACCTGGTGCAGAACAAGAGCACCTCTGCCATGCTCTTGGAGGCCACATGG------------------------------------------------------------------------------------------------------------------------------------------------------------AGC--------------------------------------------------------------------------------------------------------------------------TGAGCCC---AATGGCAAGGCTGTGTCTGTGCCACCCCTGTACTCCCAGGACCCCACGAGGAGCCTGTGTGAGGCAAGAATGCTGCTGACTAACAAAACGGATGAATGAACGAAGAAGGCA----AAGAAAAGGAATCATCCTCAGGGGACAGAACATGGGACTCTGTCTTTGGGG-AGAC-AAGTTCTGTCTGCTTAACAAGCTTCCGGCTGGTCCAGTCTTGAAAAGCCACAAGAAATGGCCTATaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaagaaataaaagaaaaaaagaaaaaaaagaaaTGGCCTATTATAGAGAAGTTTTCTTGCTTACACTTTGG-TATTTTAAAAAAGGGCTCTTAAAGGGGCAACCCAC-CTGGCAG---AGAGGCCG i canFam3.chr9 C 0 C 0 a score=341150.000000 s hg38.chr17_GL383563v3_alt 229212 114 + 375691 --TACCTCTCCCTCCTCCATTACCTG-ACACACACTCAC------------AATGCTGGTCT-CCCAGGAACCCTAAGAGGCAAGTTAAACAAGTCC--GCAGCA-GGCCAACAACACCCCAGGACCCGGCCT s panTro4.chr17 204667 114 + 82630442 --TACCTCTCCCTCCTCCATTACCTG-ACACACACTCAC------------AATGCTGGTCT-CCCAGGAACCCTAAGAGGCAAGTTAAACAACTCC--GCAGCA-GGCCAACAACACCGCAGGACCCGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 87463 114 + 73212453 --TACCTCTCCCTCCTCCACTACCTG-ACACACACTCAC------------AATGCTGGTCT-CCCAGGAACCCTAATAGGCAAGTTAAACAACTCC--ACAGCA-GGCCAACAACACCCCAGGACCCGGCAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 210331 115 - 81552678 --TACCTCTCCCTCCCTCATTACCTGAACACACACTTAC------------AATGCTGGTCT-CCCAGGAGCCCTAACAGGCAAGTTAAACAACTCC--ACAGCA-GGCCAACAACACCCCGGGACCCGGCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 119156 112 + 80904711 --TACCCCTCCCTCCCCCGTTACCTGAACACACACTCAC------------AATGCTGGCCT-CCCAGGAACCGTAACAGGCAAGTTAAAC---TCC--ACAGCA-GGCCAACAACGCCCCAGGACCCGGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 124903 112 + 80997621 --TACCCCTCCCTCCCCCGTTACCTGAACACACACTCAC------------AATGCTGGCCT-CCCAGGAACCGTAACAGGCAAGTTAAAC---TCC--ACAGCA-GGCCAACAACGCCCCAGGACCCGGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 123356 112 + 74645514 --TACCCCTCCCTCCCCCGTTACCTGAACACACACTCAC------------AATGCTGGCCT-CCCAGGAACCGTAACAGGCAAGTTAAAC---TCC--ACAGCA-GGCCAACAACGCCCCAGGACCCGGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 111632 111 + 75148670 --TACCCCTCCCTCCCCCGTCACCTGAACACACACTCAC------------AATGCTGGCCT-CCCAGGAA-CATAACAGGCAAGTTAAAC---TCC--ACAGCA-GGCCAACAACGCCCCAGGACCCGGCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 926218 109 - 1291538 --GACC-CTCCCTAC-CCATTACCTG-AAACACACTCAC------------AATGCTGGCCTCCCCAGGAACCCTAACAGGCAAGTTAAAC---TCC--ACAG-A-GGCCAACAGCACCCCAggtcccggcct i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15685314 129 - 61074082 GACAGCCTTCCCCCTTCAGTTACCTGAACACACACACACACATATGCACAGAGTGCCAGCCT-GCCAGGAGCTCTACCAGGCaagcaaaac---tcctgttagcatgaccaacaggaccccagaactctgcca i canFam3.chr9 C 0 C 0 e mm10.chr11 75860259 187 + 122082543 I a score=197074.000000 s hg38.chr17_GL383563v3_alt 229326 67 + 375691 ---------CCCTC-TCAGCCTCACCTCT--CACCTCCCCCACCCCCAT----------CA-CCAGgcacagctgctctcactgccttga s panTro4.chr17 204781 67 + 82630442 ---------CCCTC-TCAGCCTCACCTCT--CACCTCCCCCACCCCCAT----------CA-CCAGGCACAGCCGCTCTCACTGCCTTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 87577 67 + 73212453 ---------CCCTC-TTAGCCTCACCTCT--CACCTCCCGCACCCCCAT----------CA-CCAGGCACAGCCACACTCACTCCCTTGA i ponAbe2.chr17 C 0 I 11 s nomLeu3.chr19 210446 67 - 81552678 ---------TCCTC-TCAGCCTCACCTCT--CACCTCCCCCACCCCCAT----------CA-CCAGGCACAGCCGCGCTCACTCCCTTGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 119268 65 + 80904711 ---------CCCTC-TCAGCCTCACCTCT--CA-CCCCCCTA-CCCCAT----------CG-CCAGGCACACCTGCTCTCACTCCCTTGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 125015 65 + 80997621 ---------CCCTC-TCAGCCTCACCTCT--CA-CCCCCCTA-CCCCAT----------CG-CCAGGCACACCTGCTCTCACTCCCTTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 123468 65 + 74645514 ---------CCCTC-TCAGCCTCACCTCT--CA-CCCCCCTA-CCCCAT----------CG-CCAGGCACACCTGCTCTCACTCCCTTAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 111743 66 + 75148670 ---------CGCTC-TCAGCCTCACCTCT--CACCCCCCCCA-CCCCAT----------CA-CCAGGCACACCTGTTCTCGCTCCCTTGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 926327 66 - 1291538 ---------ccctc-tcagcctcacctct--cgcctcctccgcccccat----------ca-ccagccacagcagctctcgctccctga- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75860446 70 + 122082543 ---------TCTTT-CCAGCCCTGCCTCCTGCACCCTCCCCATACCTAG----------CAGCCAAACACAGCTGTTTTCCCTCCTTTGC i mm10.chr11 I 187 C 0 s canFam3.chr9 15685443 86 - 61074082 tccttgccaccctcaccagactcatctct--tgcctcctcctggtccatgcttgggatcag-ccagacacagccactctcactccctgg- i canFam3.chr9 C 0 C 0 a score=24156.000000 s hg38.chr17_GL383563v3_alt 229393 7 + 375691 ccacact s panTro4.chr17 204848 7 + 82630442 CCACACT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 210513 7 - 81552678 CCACACT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 119333 7 + 80904711 CCACACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 125080 7 + 80997621 CCACACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 123533 7 + 74645514 CCACACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 111809 7 + 75148670 CCACACT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 926393 7 - 1291538 ccacact i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75860516 7 + 122082543 ACATCCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15685529 7 - 61074082 ccacatt i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 87644 11 + 73212453 I a score=529617.000000 s hg38.chr17_GL383563v3_alt 229400 168 + 375691 aagctctc-------cttt---------------tggacacgttgttccttctcccttccctggactagctc----gtctccagcctttgggaaatcacttttatccagaagcttc--cagacat--aatcttgcatgtttccacagctatgcaca----ctccctgggttatgatcacctgtttctgtgtctgtttcctga---------- s panTro4.chr17 204855 168 + 82630442 AAGCTCTC-------CCTT---------------TGGACACGCTGTTCCTTCTCCCTTCCCTGGACTAGCTC----GTCTCCAGCCTTTGGGAAATCACTTTTATCCAGAAGCTTC--CAGACAT--AATCTTGCATGTTTCCACGGCTATGCACA----CTccctgggttatgatcacctgtttctgtgtctgtttcctgc---------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 87655 168 + 73212453 AAGCTCTC-------CCTC---------------TGAAGACGTTGCTCCTTCTCCCTTCCCTGGACCAGCTC----GTCTCCAGCCTTTGGGAAATCACTTTTATCCAGAAGCTTC--CAGACAG--AGTCTTGCATGTTTCCACGGCTATGCACA----CTccctgggttatgatcacctgtttccgtgtctgtttcctgc---------- i ponAbe2.chr17 I 11 I 1 s nomLeu3.chr19 210520 170 - 81552678 AAGCTCCC-------CCTT---------------TGAAGACGTTGTTCCTTCTCCCTTCCCTGGACTAGCTT----GTCTCCAGCCTTTGGGAAATCACTTTTATCCAGAAGCTTCCACAGACAG--AATCTTGCATGTTTCCACTGCTATGCACA----caccctgggttatgatgacctgtttctgtgtctgtttcctgc---------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 119340 170 + 80904711 AAGCTCTC-------CTCT---------------TGAAGACGTTGTTACTTCTCGCTTCCCTGGACTAGCTC----ATCTCCAGCCTCTGGGAAATCACTTTTATCCAGAAGCTTCCACAGACAG--AATATTGCATGTctccactgctacacaca----caccctgggctaggagcacctgtttctgtgtctgtttcctgc---------- i rheMac3.chr16 C 0 I 27 s macFas5.chr16 125087 170 + 80997621 AAGCTCTC-------CTCT---------------TGAAGACGTTGTTACTTCTCGCTTCCCTGGACTAGCTC----ATCTCCAGCCTCTGGGAAATCACTTTTATCCAGAAGCTTCCACAGACAG--AATATTGCGTGTctccactgctacacaca----caccctgggctaggagcacctgtttctgtgtctgtttcctgc---------- i macFas5.chr16 C 0 I 1 s papAnu2.chr16 123540 170 + 74645514 AAGCTCTC-------CTCT---------------TGAAGACGTTGTTACTTCTCGCTTCCCTGGACTAGCTC----ATCTCCAGCCTCTGGGAAATCACTTTTATCCAGAAGCTTCCAAAGACAG--AATCTTGCATGTCTCCACTGCTACGCACA----CACCCTGGGCTAGAAGCAcctgtttctgtgtctgtttcctgC---------- i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 111816 170 + 75148670 AAGCTCTC-------CTCT---------------TGAAGACGTTGTTACTTCTTGCTTCCCTGGACTAGCTC----ATCTCCAGCCTCTGGGAAATCACTTTTATCCAGAAGCTTCCACAGACAG--AATCTTGCATGTctccactgctacacacg----caccctgggctaggagcacctgtttctgtgtctgtttcctgc---------- i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 926400 169 - 1291538 aagctctc-------cctt---------------caaagacattgttccttctcccttccctggactagctc----ctatccagcctttgggaaatcacttttatccagaagcttccacagacag--catcgtacatgtccccaaggcagtgca-a----cgccctgggttataagcacctgtttctgtgtctgtttcctgc---------- i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75860523 188 + 122082543 AAACTCTA-------TTTTTTACCTTCAAATCTCTGTAGACA---TTCCTCTTCCCTTTTCCCAGTGAGCTC----TTATTTCACTAGCGGGAAATCACTTCTATCTAGAACTTTCCAGAGAAAGCAAGCCTCATCTCTTTCCACTGCAAGACGCAAAACCTTGCTGCACCATGACTGCCTCTGTACCTGCCTGTCTCCTGG---------- i mm10.chr11 C 0 I 1 s canFam3.chr9 15685536 171 - 61074082 aagcttgcttccaggtttt---------------tgtacatgcttttccttcttccCTCCATGGGCTAGGATAAAGAAATCCAGCCTTTAGGAAATTACTATTATCCAGAAGCTTCCACAGA-----ACTGTCAGGTCTC-CCACTGCAATGCACA----CA----AAATTATG------------TACGCCTGTTTCCCGCACCAGATCAA i canFam3.chr9 C 0 C 0 a score=75313.000000 s hg38.chr17_GL383563v3_alt 229568 37 + 375691 ggatggaagaccccatgatggcgggagccaggcagag s panTro4.chr17 205023 37 + 82630442 ggatggaagaccccatgacggcgggagccaggcagag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 87824 37 + 73212453 ggatggaaggccccatgacagcgggagccaggcagag i ponAbe2.chr17 I 1 C 0 s nomLeu3.chr19 210690 34 - 81552678 ---tggaaggacccatgacagcaggagccaggCAGAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 125258 29 + 80997621 gcagggaaagctccatgacagtgggagcc-------- i macFas5.chr16 I 1 C 0 s papAnu2.chr16 123711 37 + 74645514 GCAGGGAAAGCTCCATGACAGTGGGAGCCCAGCAGAG i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 111987 37 + 75148670 gcagggaaagctccatgacaccgggagccCAGCAGAG i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 926570 37 - 1291538 ggatggaaagccccatgatagcaggagccagacagag i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75860712 37 + 122082543 GGGTGGGAAGTTCTGAGACAGCAGGAACGACCCGGAG i mm10.chr11 I 1 I 173 s canFam3.chr9 15685707 37 - 61074082 AAGCTCAAAACTCCATACTGGTAGGATGCATACAGGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 119510 27 + 80904711 I a score=-2746.000000 s hg38.chr17_GL383563v3_alt 229605 1 + 375691 -t s panTro4.chr17 205060 1 + 82630442 -t i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 87861 1 + 73212453 -t i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 210724 1 - 81552678 -T i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 123748 1 + 74645514 -C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 112024 1 + 75148670 -C i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 926607 1 - 1291538 -c i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15685744 1 - 61074082 G- i canFam3.chr9 C 0 C 0 e mm10.chr11 75860749 173 + 122082543 I e rheMac3.chr16 119510 27 + 80904711 I e macFas5.chr16 125287 0 + 80997621 C a score=1302501.000000 s hg38.chr17_GL383563v3_alt 229606 493 + 375691 gcccggcaggtgccagcacacagcagatacccaacaaat-agtcagctgaaCACCCATCCAAATTGCAAGGCTTAA-GTAACTCAAGTTACTTAGGAGAAGCACAGGCTCCTCGAGGGtgctgggggctgaactgtgtcc----tccaaatccacatgttgaagctctaacct-tcatgtacttgtgagtgacaatggaccttgggaagggaattaggtttagatgaggccatgagggt----------------gattgctgcccttatgaagagagagacaccaggagaatgtgcttcctctctctctctgccatgtgagggcacagcgggaacacagccagctgcaagccagaaagagagccttcaccagggatccgaattcaccagggatctggatcagccagccccttgatcttggacttccctgtccccaga---------------------------------------------------------------------------------gctctgagaaacaaattcccactgtttacaccactcagtctatggtatgttgttatggtggctcaagttgactaCCAT s panTro4.chr17 205061 476 + 82630442 gcccggcaggtgccagcacacagcagatacccaacaaat-agtcaactgaaCACACATCCAAATTGCAAGGCTTAA-GTCACTCAGGTTACTTAGGAGAAGCACAGGCTCCTTGAGGGtgctgggggctgaactgtgtcc----tccaaatctacatgttgaagccctaaccc-tcatgtgcttgtgagtgaggatggaccttgggaagggaattaggtttagatgaggccatgagggt----------------gat---------------gagagagacaccaggagaatgtgcttcctctctctctctgccatgtgagggcacagcgggaacacagccagctgcaagccagaaagag--ccttcaccagggatccgaattcaccagggatctggatcagccagccccttgatcttggacttccctgtccccaga---------------------------------------------------------------------------------gctctgagaaacaaattcccactgtttacaccactcagtctatggtatgttgttatggtggctcaagttgactaCCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 87862 448 + 73212453 gcccagcaggtgccagcacacagcagatacccaacaaat-agtcaactgaaCACACATCCAAATTGCAAGGCTTAA-GTAACTCAGGTTACTTAGGAGAAGCGCGGGCTCCTCGAGGGtgctgggggctgaactgtgtcc----tccaaatccacatgttgaagctctaaccc-tcatgtgcttgtgagtgatgatggaccttgggaagggaattaggtttagatgaggccatgagggt----------------aactgctgcccttacgaagagagagacaccaggagaatgtgcttcctctctctctccgccatgtgagggcacagcgggaacacagccagtcgcaagccagaaagagagccttcaccagggatccgaattcaccagggatctgaatcagccagccccttcatcttggacttccccgtccccaga---------------------------------------------------------------------------------gctctgagaaacaaatt-ccactgtttacgccac-------------------------------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 210725 491 - 81552678 GCCCGGCAGGTGCCAGCGCACAGCAGATACCCAACAAAT-AGTCAACTGAACACACATCCAAATTGCAAGGCTTAA-GTAATTCAGGTTACTTAGGAGAAGCGCAGGCTCCTCGAGGGtgctgggggctgaactgtgtcc----tccaaatccacatgttgaagctctaaccc-tcatgtgcttgtgagtgacgatgggccttgggaagggcgttaggtttagatgaggccatgagggt----------------ggttgctgcccttatgaagagagagacaccaggagaatgtggttcctctctctctctgccatgtgacggcacagcgggaacacagccaattgcaagccagaaagacagccttcacc-gggatccgaattcaccagggatctgaatcagccagccccttgatcttggac-tccccgtccccaga---------------------------------------------------------------------------------gctctgagaaacaaattcccactgtttacgccactcagtctatggtgtgttgttatggtggctcaagttgactaaCAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 119537 564 + 80904711 gcccggCAGGTGCCAGCGCACGGCATATACCCAACAAAT-AGTCAACTGAACACACATCCAAATTGCAAGGCTTCA-GTAACTCAGGCTACTTAGGAGAAGCACAGGCTCTTCGGGGGTGCAGGgggctgaactgtgtac----cccaaatccacatgtcaaagctccaaccc-tcacgtgctggtgagtggcgatgggcctggggaagggaattaggtttagatgaggccatgagggt----------------gactgccgcccttatgaagagacagacgccaggaggatgtgcgtcctctctctctctgccttgtgagggcacagcgggaacacagccacttgcaagccagaaagagagccctcaccagggatccgaagtcaccagggatctgaa----acagccccttgatct------tccccctccccagagcggtaagaagcaaattcccacggtttgcgccgctcagtccgtggtaCGTCAACAGCCCcttgatcttccccctccccagggcggtgagaagcaaattcccacggtttgcgccactcagtccgtggtacgtcgttacggtggctcgagttgactaaCGG i rheMac3.chr16 I 27 C 0 s macFas5.chr16 125287 480 + 80997621 ---cggCAGGTGCCAGCGCACGGCAGATACCCAACAAAT-AGTCAACTGAACACACATCCAAATTGCAAGGCTTCA-GTAACTCAGGCTACTTAGGAGAAGCACAGGCTCTTCGGGGGTGCAGGgggctgaactgtgtac----cccaaatccacatgtcaaagctccaaccc-tcacgtgctggtgagtggcgatgggcctggggaagggaattaggtttagatgaggccatgagggt----------------gactgctgcccttatgaagagacagacgccaggaggatgtgtgtcttctctctctctgccttgtgagggcacagcgggaacacagccacttgcaagccagaaagagagccctcaccagggatccgaagtcaccagggatctgaa----acagccccttgatct------tccccctccccaga---------------------------------------------------------------------------------gcggtgagaagcaaattcccacggtttgcgccgctcagtccgtggtacatcgttacggtggctcgagttgactaaCGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 123749 483 + 74645514 GCCCAGCAGGTGCCAGCGCACGGCAGATACCCAACAAAT-AGTCAACTGAACACACATCCAAATTGCAAGGCTTCA-GTAACTCAGGTTACTTAGGAGAAGCACAGGCTCTTCGGGGGTGCCGGGGGCTGAACTGTGTGC----CCCAAATCCacatgttgaagctctaaccc-tcACGTGCTGGTGAGTGGCGATGGGCCTGGGGAAGggaattaggtttagatgaggccATGAGGGT----------------GACTGCTGCCCTTATGAAGAGACAGACGCCAGGAGGATGTgcgtcctctctctctctgccttgtgAGGGCACAGCGGGAACACAGCCACTTGCAAGCCAGAAAGACAGCCCTCACCAGGGATCTGAAGTCACCAGGGATCTGAA----ACAGCCCCTTGATCT------TCCCCCTCCCCAGA---------------------------------------------------------------------------------GCGGTGAGAAGCAAATTCCCACGGTTTGCGCTGCTCAGTCTGTGGTACGTCGTTACGGTGGCTCGAGTTGACGAACGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 112025 471 + 75148670 GCCCGGCAGGTGCCAGCGCACAGCAGATACCCAACAAAT-AGTCAACTGAACACACATCCAAATTGCAAGGCTTCA-GTAACTCAGGTTACTTAGGAGAAGCACAGGCTCTTCGGGGGtgctgggggctgaactgtgtac----cccaaatccacatgttgaagctctaaccc-tcatgtgctggtgagtggcgatgcgcctggggaagggaattaggtttagatgaggccatgagggt----------------gactgctgcccttatgaagagacagacgccaagaggatgtgcgtcctctctctctctgccttgtgagggcacagcgggaa------------caagccgcaaagagagccctcaccagggatccgaagtcaccagggatctgaa----acagccccttgatct------tccccctccccaga---------------------------------------------------------------------------------gcggtgagaagcaaattcccacggtttgcgccgctcagtccgtggtatgtcgttacggtggcgcgagttgactaaCGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 926608 460 - 1291538 gcccagcaggtgccagcacatggcagacacccgacaaat-AGGCCACTGAACACACATCCCAACTGCAAGGCGCAG-GTAACTCAGGTTACTTAGGAGAAGTGCAGGCTCTTGGAGGGtgctgggaattgaactgtgttt----cccagatctacatgttaaagctctgacccttcatgtgctggtgag-ggcgatgcgccttcggaagggaattagggttagatgaggtcacgagggt----------------ggg----gcccttataaagagagagacaccaagagaacttgctgcttctc-ctctcagccctgtgagggcacagcaggaa--cagccagctgcaagccaggaagagcaccctcaccagggattcgg----accag-------------ccagtcacttgatcttggacctcccagtctccaca------------------------------------------------------------------------------------------aacaaattcctgttgtttacactaccccatctacggtacattgttatggtagctcaagttgactaaCAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15685745 462 - 61074082 CCCCAATGCATGATAGCACA---CAAAAATCTGTCATCTGAGGCTACTGAGCA--CATCCAAATTTCAAGGCTTTATGTAACTCAGGTTACTTAAGAGAAGCACTGGCT--TAGAGGGtgtcatagactaagctgtgccccatgccccaattcatatgttgaagccctagggg-gca-gtgttg------gaacatgggcctttgggcagtggtgagggctagatggggctataagggtgggcccctcatcgtgggattagtgccct------agaagagacaccagagggcttt------catctctctcctctgtgtaaggacatagagaggtggctgacatctgtgagccaggaagagcactctcacagggaaccctg----------------------acagtactttgatctagga--ctccagcctccaga---------------------------------------------------------------------------------accatgagcagtaaact--tgttgtttaag-gatcctgtctacgctctctagttatggcagcctgagctgaGGACAAC i canFam3.chr9 C 0 I 1312 e mm10.chr11 75860749 173 + 122082543 I a score=1027494.000000 s hg38.chr17_GL383563v3_alt 230099 380 + 375691 Gg-aaaagataggccagctataaggaaaccagacccagaatcgcattagacttatcactggtaacagtggccgcc-caaagactctggatctagaattctatcagccaaactatcaacacaatgggagggcagaacacagatgtttttaaactcataaggacgctgagtttcccttacacac----actcttttt---------------------------------aagaa---ctt-aggacgggttccagaaaaacacaagtgaaaaacaagaaag-ggaaaaca-caggatcctggaaaca--gtctccaactcaaaaggtgagctgaggggaagttcccggaaggcagcgctcaggaactactctggggtctgg------------------agggcgtctcacaggaaaacagaaggctccaCACGATAGATGGTAAA s panTro4.chr17 205537 383 + 82630442 Gg-aaaagataggccagctataaggaaaccagacccagaatcgcattagacttatcaccggtaacagtggccgcc-caaagactctggatctagaattctatcagccaaactatcaacacaatgggagggcagaatacagatgtttttaaactcataaggacgctgagtttcccttacacac----actcttttt---------------------------------aagaagaactt-aggacgggttccagaaaaacacaagtgaaaaacaagaaag-ggaaaaca-taggatcctggaaaca--gtctccaactcaaaaggtgagctgaggggaagttcccggaaggcagcgctcaggaactactctggggtctgg------------------agggcatctcacaggaaaacagaaggctccaCACGATAGATGGTAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 88310 375 + 73212453 ---------taggctatCTATAAGGAAACCCGAGTCAGAATCGCATTAGACTTATCGCTGGTAACAGTGGCTGCC-CAAAGACTCTGGatctagaattctatcagccgaactatcaacacaatgggagggcagaatacagatgtttttaaactcgtaaggacgctgagtttcccttacacac----actcttttt---------------------------------aagaagaactt-aggacgggttccagaaaaacacaagtgaaaaacaagaaag-ggaaaaca-taggatcctggaaaca--gtctccaactcaaaaggtgagctgaggggaagttcctggaaggcagcgttcaggaactactctggggtctgg------------------agggcatctcacaggaaaacagaaggctccaCACGATAGATGGTAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 211216 383 - 81552678 Gg-aaaaggtaggtcacctgtaaggaaaccagagtcagaatcgcattagacgtatcgctggtaacagtggctgcc-aaaagactctggatctagaattctatcagccaaactatcaacacaatgggagggcagaatacagatgtttttaaactcacaaggacactgagtttcccttacacac----actcgtttt---------------------------------aagaagtacttaaggacgggttccagaaaaacacaagtgaaaaacaagaaag-ggagaaca-taggatcctggaaaca--gtctccaactcaaaaggcgagctgagcggaaatttccggaaGGCAGCGTTCAGGAACTACTCTGGGGTCTGG------------------AGGG-ATCTCACAGGAAAACAGAAAGCTCCACACGATAGATGGTAAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 120101 368 + 80904711 GG-AAGAGACAGGCCACCTACAAGGAAAGCAGGCTCAGAATTGCTTTAGACCTGCCGCTGG-AACAGTGGCTGCC-GAAAGACTCTGGATCTGGAATTctatcaacc------------caatgggagggcagaataccggcatttttaaactggcaaggacgctgagtttccctctcacat----actcctttt---------------------------------aagaagtacttaaggacgggttccagaaaaacaccagtgaaaaacaagaaagaggaaaacg-taggatcctggaaacg--gtctccgcctcaaaaggtgagctgaggggaagttcct----ggCAGCAATCGGGAACTACTCCGGGGCCTGG------------------AGGGGATCTCACAGGAAAACAGAAGGCTCCACACGATAGATGGTAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 125767 368 + 80997621 GG-AAGAGACAGGCCACCTACAAGGAAAGCAGGCTCAGAATTGCTTTAGACCTGCCGCTGG-AACAGTGGCTGCC-GAAAGACTCTGGATCTGGAATTctatcaacc------------caatgggagggcagaataccggcatttttaaactggcaaggacgctgagtttccctctcacac----actcctttt---------------------------------aagaagtacttaaggacgggttccagaaaaacaccagtgaaaaacaagaaagaggaaaacg-taggatcctggaaacg--gtctccgcctcaaaaggtgagctgaggggaagttcct----ggCAGCAATCGGGAACTACTCCGGGGCCTGG------------------AGGGGATCTCACAGGAAAACAGAAGGCTCCACACGATAGATGGTAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 124232 405 + 74645514 GG-AAGAGATAGGCCACCTATAAGGAAAGCAGGCTCAGAATCGCTTTGGACCTGCCGCTGG-AACAGTGGCTGCC-GAAAGACTCTGGATGTGGAATTCTATCAAGC------------CAATGGGAGGGCAGAATACCGGCATTTTTAAACTGGCAAGGACGCGGAGTTTCCCTCTCACacacagactccgtctcaaaaaaataaataaataaataaataaataaaaaagaagtacttAAGGACGGGTTCCAGAAACACACCagtgaaaaacaagaaagaggaaaacG-TAGGATCCTGGAAACG--GTCTCCACCTCAAAAGGTGAGCTGAGGGGAAGTTCCT----GGCAGCAATCGGGAACTAGTCCGGGGTCTGG------------------AGGGGATCTCACGGGAAAACAGAAGGCTCCACACGATAGatggtaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 112496 372 + 75148670 GG-AAGACATAGGCCACCTATAAGGAAAGCAGGCTCAGAATCGCTTGAGACTTACCGCTGG-AACAGTGGCTGCC-GAAAGACTCTGGATCTGGAATTctatcaacc------------caatgggagggcagaatacaggcatttttaaactggcaaggacgctgagtttccctcacacac----actcctttt---------------------------------aagaagtacttaaggacgggttccagaaaaacaccagtgaaaaacaagaaagaggaaaaca-taggatcccggaaacg--gtctccaactcaaaaggtgagctgaggggaagttcctggaAGGCAGCAATCAGGAACTACTCCGGGGTCTGG------------------AGGGGATCTCACAGGAAAACAGAAGGCTCCACACGATAGATGGTAAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 927068 364 - 1291538 GGAaaaaaataggtcacctataaggaaaccagagtcagaatggcattagccttatcactggtaacagtggctgcc---aagacgtgggatctagaatcctgtcagccaaactaccaacccaatgggagggcagaatacagaaccttttaaactcacaaggatgctgagtttcccttgcaccc----acccttttt---------------------------------aagaagtacttaaggaaaggttccggaaaaacac-----------------------------aggatcctggaaacagtgtctccaactcaaaaggtgagccgaagggaagttccaggaAGGCAGCATTCCAGAACTACTCTGGG--CTGGAGC---------CATAAAAGGGGATCTCACAGGGAAG-AGACGGCTGCACGTGACAGATGGTAAA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15687519 384 - 61074082 ga-aaaaaacaggc---ctatgaggaaaccagaatcagaacaacatcagtcttatcatcagcaatactagacgctaaaaaaaccatgcatctagaattctatcaaac----tatcaatcaaacatgagagcagaatagagacatttttagacttgcaaggactc-------------caaac----ttttctttg---------------------------------tatgggtttgtacagatgggttccagcaaaatactggtgaaaaataagaaagaggaagacactgggatcctagaaacagtgtctccaactcaggagggcag-tggaaggagatcccatgaggctggCTCTCAGTAACTAGTGCAGG--CTGGAGCTGGGAAGGTTGTGCAGGGGTTTCTGACACGGCAAGAGAAGGCTCTGTACAACAGAAGATAAA i canFam3.chr9 I 1312 I 190 e mm10.chr11 75860749 173 + 122082543 I a score=300022.000000 s hg38.chr17_GL383563v3_alt 230479 95 + 375691 ATAAAAAAGCTGCATAAAAGAGGATGTAAAGTTTCATTATTCTGTTGTCAATAAGAAACACAGTCAATAAAAA-CTCCAGGAAAAACGAAAAGTTA s panTro4.chr17 205920 95 + 82630442 ATAAAAAAGCTGCATAAAAGAGGATGTAAAGTTTCATTATTCTGTTGTCAATAAGAAACACAGTCAATAAAAA-CTCCAGGAAAAACGAAAAGTTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 88685 95 + 73212453 ATAAAAAAGCTGCATAGAAGAGGATGTAAAGTTTAATTATTCTGTTGTCAATAAGAAACACAGTCAATAAAAA-CTCTAGGAAAAACGAAAAGTTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 211599 95 - 81552678 ATAAAAAAGCTGCATAAAAGAGGATGTAAAGTTTCATTATTCTGTTGTCCATAAGAAACACAGTCAATAAAAA-CTCCAGGAAAAACTAAAAGTTA i nomLeu3.chr19 C 0 M 464 s rheMac3.chr16 120469 94 + 80904711 ATAAAAAA-CTGCATAAAAGAGGATGTAAAGTTTCATTATTCTGTTGTCAATAAGAAACACAGTCAATAAAAA-CTCCAGGAAAAACTAAAAGTTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 126135 94 + 80997621 ATAAAAAA-CTGCATAAAAGAGGATGTAAAGTTTCATTATTCTGTTGTCAATAAGAAACACAGTCAATAAAAA-CGCCAGGAAAAACTAAAAGTTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 124637 93 + 74645514 ataaaaaa-ctgCATAAAAGAGGACGTAAAGTTTCATTATTCTGTTGTCAGTAAGAAACACAGTCAATAAAAA-CTCCA-GAAAAACTAAAAGTTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 112868 94 + 75148670 ATAAAAAA-CTGCATAAAAGGGGACGTAAAGTTTCATTATTCTGTTGTCAATAAGAAACACAGTCAATAAAAA-CTCCAGGAAAAACTAAAAGTTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 927432 90 - 1291538 ATAAAAGAGCTGCATAAAAGAGGGTGCATAGTTTCATTACTCTGTTGGCAAAAAGAAACATAGTCAATAAAAA-CTCCAGGGA-----AAAAGTGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15688093 91 - 61074082 aaaaaGGAGCTGCATAAAAGGACAT---AAGTTTCATGATTCTTTTGTCATTAGAAAAA--AATCAATAAAAACCTTGAGGGAAAATTAAAAATCA i canFam3.chr9 I 190 C 0 e mm10.chr11 75860749 173 + 122082543 I a score=468560.000000 s hg38.chr17_GL383563v3_alt 230574 198 + 375691 -CACAAGAACATCATGGTCCAAATATTGGGTAAATTAAAATATGACAGGGATGA------------------AGAAATTCAGAGTTAAAAAGGAATGTTT--GCTCAGAATGGTGGGAACATTCTCCTTGGGGTGGTCTAGGGGTCAAGGTCGTTATAAAAATGTGATCCTCACATA-CGTTTGAGCCTAAGACGTTTCATGTTTACAGtttttttttt-------a s panTro4.chr17 206015 200 + 82630442 -CACAAGAACATCATGGTCCAAATACTGGGTAAATTAAAATATGACAGGGATGA------------------AGAAATTCAGAGTTAAAAAGGAATGTTT--GCTCAGAATAGTGGGAACATTCTCCTTGGGGTGGTCTAGGGGTCAAGGTCATTATAAAAATGTGATCCTCACATA-CGTTTGAGCCTAAGATGTTTAATGTTTACAttttttttttttt-----a i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 88780 201 + 73212453 -CACCAGAACATCATGGTCCAAATATTGGGTAAATTAAAATGTGACAGGGATGA------------------AGAAATTCAGAGTTAAAAAGGGATGTTT--GCTCAGAATAGTGGGAACATTCTCCTTGGGGCGGTCTAGGAGTCAAGGTCATTAT-AAAATGTGATCCTCACATA-CGTTTGAGCCTAAGATGTTTAATGTTTACAAttttttcttttt---tga i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 120563 202 + 80904711 -CACCAGAACATCATGGCCCAAATACTGGGTAAATTAAAATGTGACAGGGTTGG------------------AGAAATTCAGAGTTGAAAAGGAATGTTT--GCTCGGAATAGTGGGAACATTCTCCTCGGGGTGGTCTAGGGGTCAAGGTCATTATAAAAATGTGATCCTCGCATA-CGTTTGAGCCTAAGATGTTTAATGC---ttattttttttttttttttga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 126229 205 + 80997621 -CACCAGAACATCATGGCCCAAATACTGGGTAAATTAAAATGTGACAGGGTTGG------------------AGAAATTCAGAGTTGAAAAGGAATGTTT--GCTCGGAATAGTGGGAACATTCTCCTCGGGGTGGTCTAGGGGTCAAGGTCATTATAAAAATGTGATCCTCGCATA-CGTTTGAGCCTAAGATGTTTAATGCttttttttttttttttttttttga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 124730 205 + 74645514 -CACCAGAACATCATGGCCCAAATACTGGGTAAATTAAAATGTGACAGGGTTGG------------------AGAAATTCAGAGTTGAAAAGGAATGTTT--GCTCGGAATAGTGGGAACATTCTCCTCGGGGCGGTCTAGGGGTCAAGGTCATTATAAAAATGTGATCCTCGCATA-CGTTTGAGCCTAAGATgtttaatgcttatttttttttttttttttttga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 112962 205 + 75148670 -CACCAGAACATCATGGCCCAAATACTGGGTAAATTAAAATGTGACAGGGTTGG------------------AGAAATTCAGAGTTGAAAAGGAATGTTT--GCTCAGAATAGTGGGAACATTCTCCTTGGGGTGGTCTAGGGGTCAAGGTCATTATAAAAATGTGATCCTCGCATA-CGTTTGAGCCTAAGATGTTTAATAtttatttactttttttttttttttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 927522 195 - 1291538 -CACCAGAACATCATGGTCCAGAGACTAGGTAGATTAAAATGTGACC-GGCTGA------------------AGAAATTCAGAGAAAAAAAGGAAAATGT--GTTCAGAACAACAGGAACATTCTCCTT-GGGTGGTCTCAGGGTCAAGGTCATTAT-AAAATGTGATCCTCGTGTG-CATTTGAGCCTAATATGTTTGCTGTTTACAAAATAATTTTTA------- i calJac3.chrUn_GL286409 C 0 I 489 s canFam3.chr9 15688184 220 - 61074082 GATCGGAAAGGTCATGATCTAAATATTAGGTAAATTAAAATGTGACAGAAATGAAAAATTTTTTTTTTTTTCAGAAATGAAAAATTAAAAAGGAATGCATCAGGTCATGTTATTAGGATCATTTTCATTTGGGGGATGCAGGGGTCAAGGTAGTTACCAAAATGTGATCTTCACATACCATTTGACCCTGAGCTGTTTAATGTTTATATACAAATTTTTA------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75860749 173 + 122082543 I e nomLeu3.chr19 211694 464 - 81552678 M a score=1557.000000 s hg38.chr17_GL383563v3_alt 230772 2 + 375691 ga s panTro4.chr17 206215 2 + 82630442 ga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 88981 2 + 73212453 ga i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 120765 2 + 80904711 ga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 126434 2 + 80997621 ga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 124935 2 + 74645514 ga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113167 2 + 75148670 tt i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15688404 2 - 61074082 AA i canFam3.chr9 C 0 I 358 e mm10.chr11 75860749 173 + 122082543 I e calJac3.chrUn_GL286409 927717 489 - 1291538 I e nomLeu3.chr19 211694 464 - 81552678 M a score=47846.000000 s hg38.chr17_GL383563v3_alt 230774 32 + 375691 tggtgtctcgctctgtcacccaggctggagtg s panTro4.chr17 206217 32 + 82630442 tggtgtcttgctctgtcacccaggctggagtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 88983 31 + 73212453 cggtgtctcgctctgtca-ccaggctggagtg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 120767 32 + 80904711 cggagtcttgctctgtcgcccaggctggagtg i rheMac3.chr16 C 0 M 190 s macFas5.chr16 126436 32 + 80997621 cggagtcttgctctgtcgcccaggctggagtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 124937 32 + 74645514 cggagtctcgctctgtagcccaggctgcagtg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113169 32 + 75148670 ttgagtctcagtctgtagcccaggctggagtg i chlSab2.chr16 C 0 C 0 e mm10.chr11 75860749 173 + 122082543 I e canFam3.chr9 15688406 358 - 61074082 I e calJac3.chrUn_GL286409 927717 489 - 1291538 I e nomLeu3.chr19 211694 464 - 81552678 M a score=229740.000000 s hg38.chr17_GL383563v3_alt 230806 200 + 375691 cagcggcacaatctcggctcactgcaacctccgcctcccgggttcaagcaatt---ctgcctcagcctcctgagtagctgggattacaggcacccgccaccaggcccggctaatttttgtatttttagtagagacggggtttcaccatgttcgccgggctggtcttgaactgctgacctc--gtgatccacccgcctcggcctcc s panTro4.chr17 206249 200 + 82630442 cagtggcacaatctcggctcactgaaacccctgcctcccgggttcaagcaatt---ctgcctcagcctcctgagtagctgggattacaggcacctgccaccaggcccggctaatttttgtatttttagtagagacggggtttcaccatgttcaccgggctggtcttgaactgctgacctc--gtgatccacccgcctcggcctcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 89014 205 + 73212453 cagtggcacaatctcggctcactgaaacccctgactcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcgcctgccaccacgcccagataatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccgcccgcctcggcctcc i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 126468 201 + 80997621 cagtggcacgatcttggctcactgcaagctccacctcccggattcaagtgattctcctgcctcagcctcccgagtaactgggattacaggtg-ccgccaccacg-ccggttaatttttgtatttttagtagagacggggttttaccatgttggccagtctggtcttgaactcctgacctc--atgatcagcccacttcggcctcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 124969 200 + 74645514 caatggcacgatctcggctcactgcaagctccacctcccgggttcaagcaattct-ctgcctcagcctcccgagtaactgggattacaggtg-ccgccaccacg-ccggttaatttttgtatttttagtagagacggggttttaccatgttggccaggttggcctggaactcctgacctc--atgatcagtccacctcggcctcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113201 201 + 75148670 cagtggcacgatctcggctcactgcaatctccacctcctgggttcaagcaattct-ctgcctcagcctcccgagtaactgggattacaggcgcccgccaccacg-ccagttaatttttgtatttttagtagagacagggttttaccatgttggccagtctggtcttgaactcctgacctc--gtgatcagcccacctcggcctcc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75860749 173 + 122082543 I e canFam3.chr9 15688406 358 - 61074082 I e calJac3.chrUn_GL286409 927717 489 - 1291538 I e rheMac3.chr16 120799 190 + 80904711 M e nomLeu3.chr19 211694 464 - 81552678 M a score=37703.000000 s hg38.chr17_GL383563v3_alt 231006 21 + 375691 caaagtgctgggattacaggc s panTro4.chr17 206449 21 + 82630442 caaagtgctaggattacaggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 89219 21 + 73212453 caaagtgctgggattacagtt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 120989 21 + 80904711 caaagtgctgggattacaggc i rheMac3.chr16 M 190 C 0 s macFas5.chr16 126669 21 + 80997621 caaagtgctgggattacaggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 125169 21 + 74645514 caaagtgctgggattacaagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113402 21 + 75148670 caaagtgctgggattacagtc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75860749 173 + 122082543 I e canFam3.chr9 15688406 358 - 61074082 I e calJac3.chrUn_GL286409 927717 489 - 1291538 I e nomLeu3.chr19 211694 464 - 81552678 M a score=275986.000000 s hg38.chr17_GL383563v3_alt 231027 117 + 375691 gtgagccaccgcacccggccAACAAAATAATTT--TTACaatgtaaatcccagccaggtgcagcggctcacgctcataatcccaaccctttgggaggccgaggtgggaggatcgcttga s panTro4.chr17 206470 117 + 82630442 gtgagccactgcacccggtcAACAAAATAATTT--TTACAATGTAAATCCCAgccaggtgcagcggctcacgctcataatcccaaccctttgggaggccgaggtgggaggatcgtttga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 89240 118 + 73212453 gtgagccaccgcgcccggccTACAAAATAATTT-CTTACAATGTAAATCCCagccagctgcagcggctgatgctcataatcccaaccctttgggaggccgaggtgggaggatcacttga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 212159 116 - 81552678 GTGAGCCACTGTGCCTGGCCTACAAAATAATT---TTACAATGTAAATCCCAgccgggtgcagcggctcacggtcataatcccaaccctttgggaggccgaggtgggaggatcacttga i nomLeu3.chr19 M 464 C 0 s rheMac3.chr16 121010 119 + 80904711 gtgagccaccgtgcctggtcTACAAAATAATTTTTTTACAATGTAAATCCCAgccaggtgcagcggctcacgctcataatcccaaccctctgggaggctgaggtgggaggatcacttga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 126690 119 + 80997621 gtgagccaccgtgcctggtcTACAAAATAATTTTTTTACAATGTAAATCCCAgccaggtgcagcagctcacgctcataatcccaaccctctgggaggctgaggtgggaggatcacttga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 125190 119 + 74645514 gtgagccaccgtgcctggtctacaaaataattttttttcaatgtaaatcccagccaggtgcagcagctcacactcataatcccaaccctctgggaggccgaggtgggaggatcacttga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113423 119 + 75148670 gtgagccaccgtgcctggtcTACAAAATAATTTTTTTACAATGTAAATCCCAgccaggtgcagcggctcacgctcataatcccaaccctctgggaggctgaggtgggaggatcacttga i chlSab2.chr16 C 0 C 0 e mm10.chr11 75860749 173 + 122082543 I e canFam3.chr9 15688406 358 - 61074082 I e calJac3.chrUn_GL286409 927717 489 - 1291538 I a score=835558.000000 s hg38.chr17_GL383563v3_alt 231144 285 + 375691 ggccaggaattcaaggccagcctggccaaGCTGTTTACATCTCCCCTGTGACCCAGCTCTTGCAGGCGTGCAAAAGTCAAGCGAcaaaccatcaaacgaatcctaagcccatgccccgagccatctcctttatctaacgcccacacaccaagccaatattccccctgccctaaatcagtggagagtcagggagcacacaactagggacagcccctatgccacaaagcct-gcagggttattcagt-----------------------ccgaccccactttgctttccccgcagaagccccagtaaagg s panTro4.chr17 206587 285 + 82630442 ggccaggaattcaaggccagcctggccaaGCTGTTTACATCTCCCCTGTGACCCAGCTCTTGTAGGCGTGCAAAAGTCAAGCGAcaaaccatcaaacgaatcctaagcccatgccccgagccatctcctttatctaacgcccacacaccaagccaatattccccctgccctaaatcaatggagagtcagggagcacacaagtagggacagcccctatgccacaaagcct-gcagggttattcagt-----------------------ccggccccaccttgctttccccgcagaagccccagtaaagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 89358 281 + 73212453 ggccgggaactcaaggccagcctggccaaGCTGTTTACATCTCCCTTGTGACCCAGCTCTTGTGG----GCAAAAATCAAGAGAcaaaccatcaaacaaatcctaagtccatgccccgagccatctcctttatctaacgcccacacaccaagccaatattccccctgccctaaatcaatggagagccagggaccacacaactagggacagcccctatgccacaaagcct-gcagggttattcaga-----------------------ccagccccaccttgctttccccacagaagccccagtaaagg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 212275 282 - 81552678 ggccaggaattcaaggccagcctggccaaGCTGTTTACATCTCCCCTGTGACCCAGCTTGTGTGGGTGTGCAAAAGTCAAGCGAcaaaccatcaaacgaat-ctaagtccatgccctgagccatctcctttatctaacgcccacacaccaagccaatattcccc--gccctaaatcaatgcagagccagggaccacacaactagggacagcccctatgccacaaagcct-gcgaggtgattcagc-----------------------ccggccccaccctgctttccccgcagaagccccagtaaagg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 121129 285 + 80904711 ggccaggaattcgaggccagcccggccaaGCTGTTTACATCCTCCCTGTGACCCAGCTTTTGTGGGTGTGCAAAAGtcacgtgacaaaccatcaaacgaatcccaagtccacgccccgagccatctcctttatctaacacccacacaccaggtcaatatttcccctgccctaaatcaatgcagagccagggaccagacaacaagggacagcccctgtgccacaaagccc-gcggggttattcaga-----------------------ccggccccaccttgctgtccccacaggagccccagtaaagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 126809 285 + 80997621 ggccaggaattcgaggccagcccggccaaGCTGTTTACATCCTCCCTGTGACCCAGCTTTTGTGGGTGTGCAAAAGTCACGCGAcaaaccatcaaacgaatcccaagtccacgccccgagccatctcgtttatctaacacccacacaccaggtcaatatttcccctgccctaaatcaatgcagagccagggaccagacaacaagggacagcccctgtgccacaaagccc-gcggggttattcaga-----------------------ccggccccaccttgctgtccccacaggagccccagtaaagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 125309 285 + 74645514 ggccaggaatttgaggccagcctggccaagctgTTTACATCCTCCCTGTGACCCAGCTTTTGTGGGTGTGCAAAAGTCACGCGACAAACCATCAAACGAATCCCAAGTCCATGTCCCGAGCCATCTCCTTTATCTAACACCCACACACCAGGTCAATATTTCCCCTGCCCTAAATCAATGCAGAGCCAGGGACCAGACAACGAGAGACAGCCCCTGTGCCACAAAGCCC-GCGGGGTTATTCAGA-----------------------CTGGCCCCACCTTGCTGTCCCCGCAGGAGCCCCAGTAAAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113542 285 + 75148670 ggccaggaattcgaggccagcctggccaaGCTGTTTACATCTTCCCTGTGACCCAGCTTTTGTGGGTGTGCAAAAGTCACGCGAcaaaccatcaaacgaatcctaagtgcacgtcccgagccatctcctttatctaacacccacacaccaagccgatatttcccctgccctaaatcaatgcagagccagggactaggcgacgagggacagcccctgtgccacaaagccc-gcggggttattcaga-----------------------ccggccccgccttgctgtccctgcaggagccccagtaaagg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 928206 295 - 1291538 GGCCA--AACTCACGGCCA--------AAGTTGTTTACATCTTCCC-ATGACCCAGCTTTTGTGGGCATGCAAAACtcatgtgacaaactatgaaacgaatcctaagtacatacccccagccatctc-tttctctaactcccacacaccaagctagtatttcccctgccctcaatcaatgcagagccagggaccagacagctagggacagcccccacggcacaaagcct-gcggggttattccaaccggccagcctgaagatgtgtacccggccccaccttgct-tccctacagacaccccagtaaaga i calJac3.chrUn_GL286409 I 489 C 0 s canFam3.chr9 15688764 272 - 61074082 ggcca--AAATAATGGCCA--------AAGATGTTGCTATTTATCCTGTGATGTGGCTTTTGCAGGCCTGTGAAAGTCATGTtgcaaaccctccggccaatcctgagtccacactac--acca-ctgcctcagctaaccctcacataccacgcca--aactcctctactgtaaatca----------------------cccagtgtccctccctattccccaatgcctccctaaactgcttaaactagccaatctgaagataagtaccctgccctaccttgcctttcccatagaaaccccaataaagg i canFam3.chr9 I 358 I 186 e mm10.chr11 75860749 173 + 122082543 I a score=170987.000000 s hg38.chr17_GL383563v3_alt 231429 60 + 375691 ctgtggatgtgttttcccctctcctctgcccacgactggctctggtgcttccccacgtgg s panTro4.chr17 206872 60 + 82630442 ctgtggatgtgttttcccctctcctctgcccacgactggctctggtgctcccctacgtgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 89639 60 + 73212453 ctgtggatgtgctttcccctctcctctgcccaccactggctctggtgcttccccacgtag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 212557 60 - 81552678 ctgtggatgtgcttgcccctctcctctgcccacgactggctctggtgtttccccacgtgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 121414 59 + 80904711 ctgtggacatgctctcccctctcccctgcccacgactggctctggtgctt-cccacgtgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 127094 59 + 80997621 ctgtggacatgctctcccctctcccctgcccacgactggctctggtgctt-cccacgtgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 125594 59 + 74645514 CTGTGGACGtgctctcccctctcctctgcccGCGACTGGCTCTGGTGCTT-CCCACGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113827 60 + 75148670 ctgtggacgtgctctcccctctcctctgcccacgactggctctggtgcttccccacgtgg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 928501 59 - 1291538 ctgtggacatgccttcccctctcctctgccc-tgactggctctggtgcctccccaggtgg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75860749 173 + 122082543 I e canFam3.chr9 15689036 186 - 61074082 I a score=1817739.000000 s hg38.chr17_GL383563v3_alt 231489 610 + 375691 ccctgcccgacatggtggtcccctcctctcaggaactgtgagcaagaaattcttccaatgacattagcctcttTGTGTCATCACTCTGCCACGTGCATG----AAGACCTGGGCACAAATCataaagcatggaagaattcattatagctaaagaacagaatctacatgtaaattctggcaatctacaactaaagataccatctagacaaggagggaggtgggcatgggggag-gaagaggcggcctccatatccacagctcacacacagggagtcaagggtaccaaagctgacggaagaagacagaggaaaatattatacaaagtcacaaacttaatcaAAGAGCCGAAAGTaataacacaacgat-caaca--tcaggggacagaggggaagcagaggagtccaagctggccagctcctcatcttgcatggccaggagtcaatagagagtctcccaagttggtacatcaagaaaGGCACGGCAGGATCCAGCACGTGGACG--AACAGGCAGCAGCGGGTGACGCGCTGGCAAGGAGCC-GCCGGGCGACTGCCGTTCCCCAACGTTAGCTCTT--CCGAACAATTTGATTTTTT---------------AAAACCATATG-ATGTGTTACTTTGATT s panTro4.chr17 206932 606 + 82630442 ccctgcccaacatggtggtcccctcctctcaggaattgtgagcaagaaattcttccaatgacattagcctcttTGTGTCATCACTCTGCCACGTGCATG----AAGACCTGGGCACAAATCataaagcatggaagaattaattatagctaaagaacagaatctacatgtaaattctggcaatctacaactaaagataccatctagacaaggagggaagtgggcatgggggag-gaagaggcggcctccatatccacagctcacac----ggagtcaagggtaccaaagctgatggaagaagacagaggagaatgttatacaaagtcacaaacttaatcaaagagccgaaagtaataacacaacgat-caaca--tcaggggacagaggggaagcagaggagtccaagctggccagctcctcatcttgcatggccaggagtcaatagagagtctcccaagttggtacatcaagaaaggcacagcaggatccagcatgtGGACG--AACAGGCAGCAGTGGGTGACGCGCTGGCAAGGAGCC-GCCGGGCGACTGCCATTCCCCAACGTTAGCTCTT--CCGAACAATTTGATTTTTT---------------AAAACCATATG-ATGTGTTACTTTGATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 89699 610 + 73212453 ccctgcccgacgtggtggtcccctcctctcaggaactgtgagcaagaaattcttccaatgacattagcctcttTGTGTCATCACTCTGTCACGTGCATG----AAGACCTGGGCACAAATCATAAAGCATGGAAGAATTaattatagctaaagaacagaatctaaatgtaaattctggcaatctacaagtaaagataccatctagacaaggagggaggtgggtgtgggggag-gaagaggcggcctgcatatccacagctcacacagagggagtcaaGGGTACCAAAGCTGATGGAAGAAGACAGAGGAGAATATTATACAAAGTCACAAACTTAATCAAGGAGCCGAAAGTAATAACACAATGAT-CAACA--TCAGGGGAGAGAGGGGAAGCAGAGGAGTCCAAGCTAGCCAGCTCCTCATCGTGCATGGCCAGGAGTCAATAGAGAGTCTCCCAAGTTGGTACATCAAGAAAGGCACGGCAGGAACCAGCACGTGGACG--AACAGGCAGCAGTGGGTGACGCGCTGGCAAGGAGCC-GCCGggcgactgccgttccccaacgttagctctt--ccgaacaatttgatttttt---------------taaaccatatg-atgtgttactttgatt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 212617 596 - 81552678 ccctgcccaatgtggtggtcccctcctctcaggaactgtgagcaagaaattcttccaatgactttagcctcttTGTGTCATCACTCTGTCACGTGCAAG----AAGACCTGGGCACAAATCataaagcacggaagaattaattatagctaaagaacagaatctaaatgtaaattctggcaatctac-----aaaataccatctagacaaggagggaggtgggcgtgggggag-ggagaggcggCCTCCATATCCACAGCTCACACACA-GGAGTCGAGGGTACCAAAGCTGATGGAAGAAGACAGAGGAGAATATTATACAAAGTCACCAACTTGATCAAAGAGCCGAAAGTaataacacaatgat-caaca--tc-ggggagagaggggaagcagaggagtccaagctagccagctcctcatcgtacatggccaggagtcaat--agagtctgccaggttggt-----aaaAAAGGCACAGCAGGAACCAGCACGTGGATG--AACAGGCAGCAGTGGGTGATGCGCTGGCGAGGAGCC-GCCGggcgactgccgttccccaacgttagctctt--ccgaacaatttgatttttt---------------aaaaccatatg-atgtgttactttgatt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 121473 606 + 80904711 ccctgcccgacgaggtggtcccctcttctcgggaactgtgagcaacaaattctttcgatgacattagccccttggtGTCATCACTCCGTCACCTGCCCA----AAGACCCGGGCACAAATCataaagcatggaagaattaatcatagc-aaagaacagaatctaaatgtaaatgctggcaatctacaagtaaagataccaactagacaaggagggaagtgggcgtgggggag-gaagAGGAGGCCTCCATACCCACAGCTCACACAGAGGGAGTCCAGGGTACCAAAGCTGATGGAAGACGACAGAGGAGAATATTATACAAAGTCACAAAATTA----AAGAGCTGAAAGTCataacaaaatgat-caaca--tcaggggagagacgggaagcagagcagtccaaactagccagctcctcaccttgcgtggccaggagtcaatagagagtctcccaagttggtaaatcaagaaaGGCACGGCAGGAACCGGCACGTGGACG--AACAGGCAGCAGCGGGTGACGTGCTGGCAAGGAACCTGCCGGGCGACTGCCGTTCCCCAGCGTTAGCTCTT--CTGAACAATTTGATTTTTT---------------AAAACCATATG-ATGTGTTACTTTGATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 127153 606 + 80997621 ccctgcccgacgaggtggtcccctcttcttgggaactgtgagcaacaaattctttcgatgacattagcctcttggtGTCATCACTCCGTCACCTGCCCG----AAGACCCGGGCACAAATCataaagcatggaagaattaatcatagc-aaagaacagaatctaaatgtaaatgctggcaatctacaagtaaagataccaactagacaaggagggaggtgggcgtgggggag-gaagaggaggcctccatacccacagctcacacagagggagtccagggtaccaaagctgatggaagatgacagaggagaatattatacaaagtcacaaaatta----aAGAGCTGAAAGTCataacaaaatgat-caaca--tcaggggagagacgggaagcagagcagtccaaactagccagctcctcaccttgcatggccaggagtcaatagagagtctcccaagttggtaaatcaagaaaGGCACGGCAGGAACCGGCACGTGGACG--AACAGGCAGCAGCGGGTGACGTGCTGGCAAGGAACCCGCCGGGCGACTGCCGTTCCCCAGCGTTAGCTCTT--CTGAACAATTTGATTTTTT---------------AAAACCATATG-ATGTGTTACTTTGATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 125653 609 + 74645514 CCCTGCCCGACGAGGTGGTCCCCTCTTCTCGGGAACCGTGAGCAAGAAATTCTTTCGATGACATTAGCCTCTTGGTGTCATCACTCCGTCACCTGCCCA----AAGACCCGGGCACAAATCATAAAGCGTGGAAGAATTAATCATAGC-AAAGAACAGAATCTAAATGTAAATGCTGGCAATCTACAAGTAAAGATACCAACTAGACAAGGAGGGAGGTGGGcgtgggggag-gaagaggaggcctcCATACCCACAGCTCACACAGAGGGAGTCCAGGGTACCAAAGCTGATGGAAGACGACAGAGGAGAATATTATACAAAGTCACAAACTTAATC-AAGAGCTGAAAGTCATAACAAAATGAT-CAACA--TCAGGGGAGAGACGAGAAGCAGAGCAGTCCAAACTAGCCAGCTCCTCACCTTGCATGGCCAGGAGTCAATACAGAGTCTCCCAAGTTGGTAAATCAAGAAAGGCACGGCAGGAACCGGCACGTGGACG--AACAGGCAGCAGCGGGTGACGTGCTGGCAAGGAACCCGCCGGGCGACTGCCGTTCCCCAGCGTTAGCTCTT--CTgaacaatttgatttttt---------------aaaaccatatg-aTGTGTTactttgatt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 113887 609 + 75148670 ccctgcccgacgaggtggtcccctcctctcgggaactgtgagcaagaaactctttcaatgacattagcctcttggtGTCATCACTCCGTCACCTGCCTG----AAGACCTGGGCACAAATCataaagcatggaagaattaatcatagc-aaagaacagaatctaaatgtaaatgctggcaatctacaagtaaagataccaactagacaaggagggaggtgggcgtgggggag-gaagaggaggCCTCCATACCCACAACTCACACAGAGGGAGTCCAGGGTACCAAAGCTGACGGATGACGACAGAGGagaatattatacaaagtcacaaacttaatcaaagagctgaaagtcataacaaaatgat-caaca--tcaggggagagacgggaagcagagcagtccaagctagccagctcctcaccttgcgtggccaggagtcaatagagagtctcccaagttggtaaatcaagaaaGGCACGGCAGGAACC-ACACGTGGACG--AACAGGCAGCAGCGGGTGACGTGCTGGCAAGGAGCCTGCCGGGCGACTGCCATTCCCCAGCGTTAGCTCTT--CTGAACAATTTGATTTTTT---------------AAAACCATATG-ATGTGTTACTTTGATT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 928560 614 - 1291538 ccctgcctgacatggtggtcccctcctctcagaaactgtgagcaagagattctttcagtgacattagcctctttgtgtcat--ccctgtcacctgcatgaagtaagacctgggcacaAATCACAAAGCATGGAAGAATTAATTACAGCTAAAGAACAGAATCTAAATGTAAATTCTGGCAATCTACAAGTACAGATTCCATCTAGACAAGGAGGAACGTAGGCGGAGGGGAGCGAAGGGAAGGCCTCCATACCTACAGCTCACACAGAGGGAGTCAAGGGTACCAAAGCTGATGGAAGAAGAAAGAGGAGAATATTATACAAAGCCACAAACTTAATC-AAGAGCTAAAAGTCATAACAAGATGATCCAACA--CCAGGGGAGAGAGGGAAAGCAGAGTTGTCCAAACTCGCCAGCTCCTCACCCTGCAAGTCCGGGAGTCAGTAGAGAGTCTCCCAAGCTGGTAAATCAAGAAAGGCATGGCAGGAGCCAGCACGTGGAGG--AACAAGCCACAGCAGGTGACGCACTGGCACAGAGTCCCCCGGACGACCACTGTT-CCCAACACTAGCTCTT--CTGAACAATTTGATTTTTT---------------AAAACCATATGCATGTGTTACTCTGATT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75860922 546 + 122082543 CCCTGGGCAGCCTGGTGGCCCAATCC-CTCACAATCTGTAAGGAATAAACCCAT--------------CTTTGCATGGCATCACTCAGGCACCTCTGTAAATTAGGACCTGGGTACAAGTCATTGAGCTTGGAAGATT---------------AACAGCAGGTAAGTG--------AGCAAT-------------------------GGGGAGGGAGGGAGGGATGGGAGAC-------------TCCACGGCCAAGGCTCCCAGGGC-CGAGGTGGGGATACAAGATATGGAAGTGGGGGTGGGGAGGCAATATCACAGAAAATTACAAATGTAATTAAAGTGCtaaaa---atattaaagtgat-caaaaattaggaggcgagagaggaaacagagcagtcgaagccaggcggctcctcacccctcacag-cgtgagtcaagatcgggcatcttgtgttgatgaatcaCAAGGAACATGACAAGACCCAGCACGTGAACACCAGCCAGCTACCTCGGGCTAGGTGAGGG----AGGCCTGGCGGGCGGCTTCCTCTACT---GGCTGACACTTGGCCAAACAATTGGAATTTTTTCTCTCTCTCTCTTCTAAACCAC----ATGCATTCCTCTGATT i mm10.chr11 I 173 C 0 e canFam3.chr9 15689036 186 - 61074082 I a score=678906.000000 s hg38.chr17_GL383563v3_alt 232099 180 + 375691 AAAATTAAAATG-TAACAGATTGGTAATTGGATGCTGATATTATTAAATCCTCGGTCTGCACGGTAGGTCGACTCGTGGGGAGCTGGCACAGTCTGTGG-CTGGCACACTGAATCTGGATGTGGCTTAAGGGAGGAAAGCTGGTAGCTCAGGAAAGGAAAGGAATGCAGTAAGTAAAATTTC s panTro4.chr17 207538 180 + 82630442 AAAATTAAAATG-TAACAGATTGGTAATTGGATGTTGATATTATTAAATCCTCGGTCTGCACGGTAGGTCGACTCGTGGGGAGCTGGCACAGTCTGTGG-CTGGTATACTGAATCTGGATGTGGCTTAAGGGAGAAAAGCTGGTAGCTCAGGAAAGGAAAGGAATGCAGTAAGTAAAATTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 90309 179 + 73212453 aaaattaaaATG-TAACAGATTGGTAATTGGATGTTGATATTATTAAATCCTCGGTCTGCACGGTAGGTCGACTCGTGGGGAGCTGGCACGGTCTGTGG-CTGGTGTACTGAATCTGGATGTGGCTTAAGGGAGAAAA-CTGGTAGCTCAGGAAAGGAAAGGAATGCGCTAAGTACAATTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213213 180 - 81552678 aaaattaaaATA-TAACAGATTGGTAACTGGATGTTGATATTATTAAATCCTCGGTCTGCACGGTAGTTCGACTCGTGGGGAGCTGGCACAGTCTATGG-CTGGTAGACTGAATCTGGATGCGGCTTAAGGGAGAAAAGCTGGTAGCTCAGGAAAGGAAAGGAATGCAGTAAGTAAAATTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 122079 180 + 80904711 AAAATTAAAATG-TAACAGATTGGTAACTGTTTGTTGATATTATTAAATCCTCAGTCTGCACGGCAGGTCGACTTGTGGGGAGCCGGCACAGTCTATGG-CTGGTATCCTGAGTCCGGATGCAGCTTAAGGGAGAAAAGCTGGTAGCTCAGGAAAGGAAAGGAACATAGTAAGTAAAATTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 127759 180 + 80997621 AAAATTAAAATG-TAACAGATTGGTAATTGGATGTTGATATTATTAAATCCTCAGTCTGCACGGCAGGTCGACTCGTGGGGAGCCGGCACAGTCTATGG-CTGGTATCCTGAGTCCGGATGCAGCTTAAGGGAGAAAAGCTGGTAGCTCAGGAAAGGAAAGGAACATAGTAAGTAAAATTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 126262 180 + 74645514 aaaattaaaatg-caacagATTGGTAATTGGATGTTGATATTATTAAATCCTCAGTCTGCACGGTAGGTCGACTCGTGGGGAGCCGGCACAGTCTATGG-CTGGTATCCTGAGTCCGGATGCAGCTTAAGGGAGAAAAGCTGGTAgctcaggaaaggaaaggaacataGTAAGTAAAATTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 114496 180 + 75148670 AAAATTAAAATG-TAACAGATTGGTAATTGGATGTTGATATTATTAAATCCTCAGTCTGCACAGCAGGTCGACTCGTGGGGAGCCGGCACAGTCTGTGG-CTGGTATCCTGAGTCCGGATGCAGCTTAAGGGAGAAAAGCTGGTAGCTCAGGAAAGGAAAGGAACATAGTAAGTAAAATTTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929174 175 - 1291538 GAAATTAAAATG-GAACAGATTGGTAATTGGATGTTGATATTATTAAATCCTCGGTCTGCATGGCAGGTTGACGGGCGGAGAGCTGGCACAGTCTGTGG-CTCGGATGCTGAATCTGGATGTGGCTTATGGGAGAAAAGCTGGGAGCTT-----AGGAAAGGAACACAGTAAGTGAAACTTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75861468 175 + 122082543 AAAGCGAAAGCA-TAACGGGCTTGTAATTGAATGTTGATGTTATTCAATCCTTGGGCTGCATGGCAGGTCG-CATGTGGGGAGCTGG---AGTGTCTGGCCCGGAATATGAAATCTGGATGCGGCTTCAGGGAGAGAAGCTAATAGAGCAGGAGAGGGGAGGGACGCAGTAATTGAAATG-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15689222 179 - 61074082 aaTATTAAAGTTCTAACAAATTGGTCATTGGATGTTCATGTTATTGAATTCCTGGGCTGCATGGCAGGTGGTCACATGTGGAGTTGG-GCCATCTATGG-CTAGTATACTGAACCTGGATGTGA-TTAAGAGAGAAAAGTTGGTAGTTCAGGAAAGGAAAAGAAAGCAGTAATTAAATTTTT i canFam3.chr9 I 186 I 216 a score=57353.000000 s hg38.chr17_GL383563v3_alt 232279 22 + 375691 CTGCCAT-----------GGAAGAGACTTTGTG s panTro4.chr17 207718 22 + 82630442 CTGCCAT-----------GGAAGAGACTTTGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 90488 22 + 73212453 CTGCTAT-----------GGAAGAGACTTTGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213393 21 - 81552678 C-GCCAT-----------GGAGGAGACTTTGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 122259 22 + 80904711 CTGCCAT-----------GGAAGAGACTTTGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 127939 22 + 80997621 CTGCCAT-----------GGAAGAGACTTTGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 126442 22 + 74645514 CTGCCAT-----------GGAAGAGACTTTGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 114676 22 + 75148670 CTGCCAT-----------GGAAGAGACTTTGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929349 33 - 1291538 CTGCCATGGAACAGGCTAGGAAGAGATTTTGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75861643 9 + 122082543 -----AT-------------------TTTTGTA i mm10.chr11 C 0 C 0 e canFam3.chr9 15689401 216 - 61074082 I a score=907678.000000 s hg38.chr17_GL383563v3_alt 232301 290 + 375691 AAGTTACGGTTAGTTTGAGAACGTCGGTATGAGTTGGTAACACACCGACACTCCCGTCCCTGAAGAAGGCCAAGTTCCTTCCCACACATCACTGCACCCACCTAACCGCCCGGAGTCGGAATTGTGGCCGTGGGCACCTCGACGGGTTTTCAAGGGGGAACCAAAGTTTCACTGCA-GACG--GGCAGGCAGAGCTGGGTCCAGCAGGA-----AACA--AGGGCCTGAGGGTATCGTGCTGTTAGCGGACGCGATGCTGCTTTCCAAGATGGCTGGGCGGGGATCTCTGATCAGATTTC s panTro4.chr17 207740 290 + 82630442 AAGTTACAGTTAGTTTGAGAACGTCGGTATGAGTTGGTAACACACCGACACTCCCGTCCCTGAAGAAGGCCAAGTTCCTTCCCACACATCACTGCACCCACCTAACCACCCGGAGTCAGAATTTTGGCCGTGGGCACCTCGACGGGTTTTCAAGGGGGAACCAAAGTTTCACTGCA-GATG--GGCAGGCAGAGCTGGGTCCAGCAGGA-----AACA--AGGACCTGAAGGTATCGTGCTGTTGGCGGACGCGATGCTGCTTTCCAAGATGGCTGGGCGGTGATCTCTGATCAGATTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 90510 290 + 73212453 AAGTTATGGTTAGTTTGAGAACGTCAGTATGAGTTGGGAACACACCGACACTTCTGTCCCTGAAGAAGGCCAAGTTCCTTCCGGCACATCGCTGAGCCCACCTAACCACCCGGAGTCAGATTTTTGGCCGTGGGCAACTCGACAGGTTTTCAAGGGGGAACCAAAGTTTCACTGCA-GATG--GGCAGGCAGAGCTGGGTCCAGCAGGA-----AACA--AGGGCCTGAGGGTTTCGTGCTGTTAGCAGACGCAATGCTGCTTTCCAAGACGGCTGGGCGGTGATCTCTGATCAGATTTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213414 290 - 81552678 AAGTTACGGTTAGTTTGAGAACGTCAGTATGAGTTGGGAACACTCCGACACTTCTGTCCCTGAAGAAGGCCAAGTTCCTCCCGGCACATCACTGCGCCCACCTAACCACCCGGAGTCAGATTTTTGGCCGTGGGCACCTCGACAGGTTTTCAGGGGGGAACCAAAGTTTCACTGCA-GATG--GGCAGGCAGAGCTGGGTCCAGCAGGA-----AACA--AGGGCCTGAGGGTGTCGAGCTGTTAGCAGATGCAATGCTGCTTTCCAAGACGGCTGGGCGGTGATCCCCGATCAGGTTTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 122281 289 + 80904711 AGGTTATGGTTAGTTTGAGAACATCAGTGTAAGTTGGGAACACACCGACACTTCTGTCCCTGAAGAAGGCCAAGTTCCTTCTGGCACATCACTGCCCCCACCTAACCACTCAGAGTCAGATTTTTGGCCGCGGGCACCTCGTCAGGTTTTCAA-GGGGAACCAAAGTTTGACTGCA-GAGG--GGCAGGCAGAGCTGGGTCCAGCAGGA-----AACA--AGGGCCTGGGGGTATCGTGCTGTTAGTGGACACAACGTTACTTTCCAAGACGGCTGGGCGGTGATCTCTGATCAGGTTTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 127961 289 + 80997621 AGGTTATGGTTAGTTTGAGAACATCAGTGTAAGTTGGGAACACACCGACACTTCTGTCCCTGAAGAAGGCCAAGTTCCTTCTGGCACATCACTGCCCCCACCTAACCACTCAGAGTCAGATTTTTGGCCGCGGGCACCTCGTCAGGTTTTCAA-GGGGAACCAAAGTTTCACTGCA-GAGG--GGCAGGCAGAGCTGGGTCCAGCAGGA-----AACA--AGGGCCTGGGGGTATCGTGCTGTTAGTGGGCACAACGCGACTTTCCAAGACGGCTGGGCGGTGATCTCTGATCAGGTTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 126464 289 + 74645514 AGGTTATGGTTAGTTTGAGAACGTCAATGTAAGCTGGGAACACACCGACACTTCTGTCCCTGAAGAAGGCCAAGTTCCTTCTGGCACATCACTGCCCCCACCTAACCACTCAGAGTCAGATTTTTGGCCGCGGGCACCTCGTCAGGTTTTCAA-GGGGAACCAAAGTTTCACTGCA-GAGG--GGCAGACAGAGCTGGGTCCAGCAGGA-----AACA--AGGGCCTGGGGGTATCGTGCTGTTAGTGGACACAACGCTACTTTCCAAGACAGCTGGGCGGTGATCTCTGATCAGGTTTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 114698 289 + 75148670 AGGTTATGGTTAGTTTGAGAAGGTCAGTGTAAGTTGGGAACACACCGACACTTCTGTCCCTGAAGAAGGCCAATTTCCTTCTGGCACATCACTGCCCCCACCTAACCACTCAGAGTCAGATTTTTGGCTGCAGTCACCTCGTCAGGTTTTCAA-GGGGAATCAAAGTTTCACTGCA-GAGG--GGCAGGCAGAGCTGGGTCCAGCAGGA-----AAAA--AGGGCCTGGGGGTATCGTGCTGTTAGTGGACACAACGCTACTTTCCAAGACGGCTGGGCAGCGATCTCTGATCAGGTTTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929382 285 - 1291538 AAGTTATGGTTACTTTGAG-ACATCAGCATGAGTTGGGAAGACACTGACATTTCTGTCCCTGAAGAAGGCCAAGTTCCTTCTGGCATGTCACTGTGCCCACCTAACCACGAGGAGTCAGATTTTTGGCGGTGGGCACCTTAACAGTTTTTCAA-AGGGAAGCAGAGTTTCACTGCA-AAGG--GGCAGGAGGAGCTGGGTCGAG-AGGG-----AACA--AAGGCC--GGGATATCGTGCCGTTCGTGAACGCAACACTGCTTTCCAAGACGGCCAGGCGGTAACCTCTGATCAGGTTTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75861652 209 + 122082543 AG----------------------CAGAACAAGATAGGA-----------------------------GATGTGACCCCCCTGGCACACTGCCGTCCCCATCCAGCCACCAGGAGCCAGGACT-----------------------TTTACAG-AAGGAAGCACAA---------A-GATGATGGTGAGCTAAGCAGAGGCTAGAGGGAGGAGGAGCA--AGGCCC--AGGGCATCCCACAGCTGGAGAGGGC-ACGCTA-TTCCTGAGGCTGCTGGGTAGTGTCTTCTGGCCAGGTTTC i mm10.chr11 C 0 I 1707 s canFam3.chr9 15689617 278 - 61074082 AAACTATGCTTAGTTGAAAAACACCTGCATGAGTTCATA--TTACTGAAATTTCTGTCCCTGAAGAAAGCCAAGTTCCCCCTCAGATGTCACTGTACCCATCTAACCTCCAGGAGTCAGA-----GATGGGAAAAACTTGAACAGTTTTTCAA-AGGGAACCAGGGCTTCCAAGCATAAAA--GGCAGGCAGAGCTGGATCCCTCAGAA-----AACAGGAAGGGCCAGGAGCATTG---GGTTAGAGGG----AGACTGCTCTCAAAGACAGCTGGCCAGTACCCTTTGACCAGGTTTC i canFam3.chr9 I 216 C 0 a score=189831.000000 s hg38.chr17_GL383563v3_alt 232591 63 + 375691 ----------------------AAAGCCACGATTTTGGCCGCGTGCGACAAGCCGGACTCTCCAAGAGCCTTGGACCCACACCGA s panTro4.chr17 208030 63 + 82630442 ----------------------AAAGCCACGATTTTGGCCGCGTGCGACAAGCTGGACTCTCCAAGAGCCTTGGCCCCACACCGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 90800 63 + 73212453 ----------------------AAAGCCACGATTTTGGCCACGTGTGACAAGCTGGACTCTCCAAGAGCCTTGGACCCACACCGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213704 63 - 81552678 ----------------------AAAGCCACGATTTTGGCCACGTGCGACAAGCTGGACTTTCCAAGAGCCTCGGACCCACACCGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 122570 63 + 80904711 ----------------------AAAGCCACGGTTTTGGCCACGTGCGACAAGCTGGACTCTCCAAGAGCCTTGGACCCACACCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 128250 63 + 80997621 ----------------------AAAGCCACAGTTTTGGCCACGTGCGACAAGCTGGACTCTCCAAGAGCCTTGGACCCACACCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 126753 63 + 74645514 ----------------------AAAGCCACAGTTTTGGCCACGTGCGACAAGCTGGACTTTCCAAGAGCCTTGGACCCACACCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 114987 63 + 75148670 ----------------------AAAGCCACAGTTTTGGCCACGTGCGACAAGCTGGACTCTCCAAGAGCATTGGACCCACACCAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929667 63 - 1291538 ----------------------AAAGCCATGATTTTGACCACATGCGACAAACTGGACTCTCCAAGAGCCTTGGACCCTAACCAA i calJac3.chrUn_GL286409 C 0 I 3 s canFam3.chr9 15689895 55 - 61074082 CGTGGTGACAAGCTGAGTATGAAAAGCCATAATTACAGCCAAG-GCGACAAGCTGA----------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I a score=121455.000000 s hg38.chr17_GL383563v3_alt 232654 42 + 375691 TACTGAACAAGCTCAGCAAACGTGAGGTGTACTGAGGTAACA s panTro4.chr17 208093 42 + 82630442 TACTGAACAAGCCCAGCAAACGTGAGGTGTGCTGAGGTAACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 90863 42 + 73212453 TACTGAACAAGCCCAGCGAACGTGAGGTGTGCTGAGGTAACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213767 42 - 81552678 TACTGAACAAGCCCAGCGGACATGAGGTGTGCTGAGGTAACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 122633 42 + 80904711 TACTGAACAAGCCCAGCTGACGTGAGGTGTGCTGAGGTAACA i rheMac3.chr16 C 0 I 359 s macFas5.chr16 128313 42 + 80997621 TACTGAACAAGCCCAGCTGACGTGAGGTGTGCTGAGGTAACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 126816 42 + 74645514 TACTGAACAAGCCCAGCTGACGTGAGGTGTGCTGAGGTAACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115050 42 + 75148670 TACTGAACAAGCCCAGCTGACGTGAGGTGTGCTGAGGTAACA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15689950 42 - 61074082 TACTGAGCAAGGCAAGCTGACATGAGATGTGCTAGTGCAATG i canFam3.chr9 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I a score=230757.000000 s hg38.chr17_GL383563v3_alt 232696 88 + 375691 TACACACTTGTTTCTAGCATTGTTTTCTGCCGGAAATGCCATCTGTCACTCAAACCCGAATAGAACCACCCTACCTCAAAGTTCTGGC s panTro4.chr17 208135 88 + 82630442 TACACACTTGTTTCTAGCATTGTTTTCTGCCGGAAATGCCATCTGTCACTCCAACCCTAATAGAACCACCCTACCTCAAAGTTCTGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 90905 88 + 73212453 TACACACTTGTTTCTAGCATTGTTTTCTGCCGGAAATGCCATCTGTCACTCAAACCCGAATAGAACCGCCCTACCTCAAAGTTCTGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213809 88 - 81552678 CACACACTTGTTTCTAGCACTGTTTTCTGCCGGAAATGCCATCCGTCACTCAAACCCGAACAGAACCACCCCACCTCGAAGTTCTGGC i nomLeu3.chr19 C 0 T 2 s rheMac3.chr16 123034 88 + 80904711 TACATACTTGTTTCTAGCAGTGTTTTCTACTGGAAATGCCATCTGTCACTCAAAACCAAATAGAGCCAGCCTACCTCAAAGTTCTGGC i rheMac3.chr16 I 359 C 0 s macFas5.chr16 128355 88 + 80997621 TACATACTTGTTTCTAGCAGTGTTTTCTACCGGAAATGCCATCTGTCACTCAAAACCAAATAGAGCCAGCCTACCTCAAAGTTCTGGC i macFas5.chr16 C 0 T 2 s papAnu2.chr16 126858 88 + 74645514 TACATACTTGTTTCTAGCATTGTTTTCTACCGGAAATGCCATCTGTCACTCAAAACCGAATAGAACCAGCCTACCTCAAAGTTCTGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115092 88 + 75148670 TACATACTTGTTTCTAGCATTGTTTTCTACCGGAAATGTCATCTGTCACTCAAAACCGAATAGAACCAGTCTACCTCAAAGTTCTGGC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15689992 83 - 61074082 CACATATACGTTT-TACTACCAGTTCGTGCTGGTAATG----CTGTCGCTCAAACCAGATTGGGATCATCCTACCTTAAAGTTCTGGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I a score=39583.000000 s hg38.chr17_GL383563v3_alt 232784 49 + 375691 TGACAGCAGGATTACCCTTCGGAGCCGCGAGCGCTGGATGGGGACTCAG s panTro4.chr17 208223 49 + 82630442 TGACAGCAGGATTACCCTTCGGAGCCGTGCGCGCTGGATGGGGACTCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 90993 49 + 73212453 TGACAGCGGGATTACCCTTCAGAGCTGTGCACACTGAATGGAGACTCAG i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 126946 49 + 74645514 TGACAGCAGGATTACCCTTCCGAGCCGTGCACGCTGGATGGGGAGTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115180 49 + 75148670 TGACAGCAGGATTACCCTTCCGAGCTGTGCACATTGGATGGGAAGTCAG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15690075 48 - 61074082 TGGCAGCTTGA-TAACTTGCTGCCCTACTCAAGGAGCAAGGAGACTCAG i canFam3.chr9 C 0 I 227 e mm10.chr11 75861861 1707 + 122082543 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e rheMac3.chr16 123122 0 + 80904711 C e macFas5.chr16 128443 2 + 80997621 T e nomLeu3.chr19 213897 2 - 81552678 T a score=5038.000000 s hg38.chr17_GL383563v3_alt 232833 8 + 375691 AATCCGCA s panTro4.chr17 208272 8 + 82630442 AATCCGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 91042 8 + 73212453 AATCTGCA i ponAbe2.chr17 C 0 I 5831 s papAnu2.chr16 126995 8 + 74645514 AATCCATA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115229 8 + 75148670 AGTCCATA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e rheMac3.chr16 123122 0 + 80904711 C e macFas5.chr16 128443 2 + 80997621 T e nomLeu3.chr19 213897 2 - 81552678 T a score=1753.000000 s hg38.chr17_GL383563v3_alt 232841 4 + 375691 GCAC s panTro4.chr17 208280 4 + 82630442 GCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 96881 4 + 73212453 GCAT i ponAbe2.chr17 I 5831 C 0 s papAnu2.chr16 127003 4 + 74645514 GCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115237 4 + 75148670 GAGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e rheMac3.chr16 123122 0 + 80904711 C e macFas5.chr16 128443 2 + 80997621 T e nomLeu3.chr19 213897 2 - 81552678 T a score=94285.000000 s hg38.chr17_GL383563v3_alt 232845 59 + 375691 GTTGACAGCAGGATTACCCTTCGGAGCCGTGCGCGCTGGATGGGGACTCAGAATCCGCA s panTro4.chr17 208284 59 + 82630442 GTTGACAGCAGGATTACCCTTCGGAGCCGTGCACGCTGGATGGGGACTCAGAATCCGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 96885 59 + 73212453 GCTGACAGCAGGATTACCCTTCAGAGCTGTGCACACTGAATGGAGACTCAGAATCCGCA i ponAbe2.chr17 C 0 T 63 s nomLeu3.chr19 213895 59 - 81552678 GCTGACAGCGGGATCAGCCTTCAGAGCCGTGCACGCTGGGTGGGGACTCCGAATCGGCA i nomLeu3.chr19 T 2 C 0 s macFas5.chr16 128441 59 + 80997621 GCTGACAGCAGGATTACCCTTCCGAGCTGTGCACGCTGGATGGGGACTCGGAATCCGCA i macFas5.chr16 T 2 C 0 s papAnu2.chr16 127007 59 + 74645514 GTGGACAGCAGGATTATCCTTCCGAGCCGTGCACGCTGGATGGGGAGTCAGAATCCATA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115241 59 + 75148670 GCTGACAGCAGGATTACCCTTCCGAGCTGTGCACGTTGGATGGGAAGTCAGAGTCCATA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e rheMac3.chr16 123122 0 + 80904711 C a score=4596.000000 s hg38.chr17_GL383563v3_alt 232904 4 + 375691 GCAC s panTro4.chr17 208343 4 + 82630442 GCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 96881 4 + 73212453 GCAT i ponAbe2.chr17 T 63 C 0 s nomLeu3.chr19 213954 4 - 81552678 GCGT i nomLeu3.chr19 C 0 T 63 s macFas5.chr16 128500 4 + 80997621 GCGT i macFas5.chr16 C 0 T 63 s papAnu2.chr16 127066 4 + 74645514 GCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115300 4 + 75148670 GAGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e rheMac3.chr16 123122 0 + 80904711 C a score=73554.000000 s hg38.chr17_GL383563v3_alt 232908 59 + 375691 GTTGACAGCAGGATTACCCTTCGGAGCCGTGCGCGCTGGATGGGGACTCAGAATCTGCA s panTro4.chr17 208347 58 + 82630442 G-TGACAGCAGGATTACCCTTCGGAGCCGTGCACGCTGGATGGGGACTCAGAATCCGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 96885 59 + 73212453 GCTGACAGCAGGATTACCCTTCAGAGCTGTGCACACTGAATGGAGACTCAGAATCCGCA i ponAbe2.chr17 C 0 T 120 s nomLeu3.chr19 213895 59 - 81552678 GCTGACAGCGGGATCAGCCTTCAGAGCCGTGCACGCTGGGTGGGGACTCCGAATCGGCA i nomLeu3.chr19 T 63 C 0 s macFas5.chr16 128441 59 + 80997621 GCTGACAGCAGGATTACCCTTCCGAGCTGTGCACGCTGGATGGGGACTCGGAATCCGCA i macFas5.chr16 T 63 C 0 s papAnu2.chr16 127070 59 + 74645514 GTGGACAGCAGGATTATCCTTCCGAGCCGTGCACACTGGATGGGGAGTCAGAATCCATA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115304 32 + 75148670 GCTGACAGCAGGATTACCCTTCTGAGCTGTGC--------------------------- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e rheMac3.chr16 123122 0 + 80904711 C a score=4115.000000 s hg38.chr17_GL383563v3_alt 232967 5 + 375691 GCATG s panTro4.chr17 208405 5 + 82630442 GCATG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 213954 5 - 81552678 GCGTG i nomLeu3.chr19 C 0 T 62 s macFas5.chr16 128500 5 + 80997621 GCGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 127129 5 + 74645514 GCGTG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e chlSab2.chr16 115336 0 + 75148670 C e rheMac3.chr16 123122 0 + 80904711 C e ponAbe2.chr17 96944 120 + 73212453 T a score=273.000000 s hg38.chr17_GL383563v3_alt 232972 1 + 375691 T s macFas5.chr16 128505 1 + 80997621 T i macFas5.chr16 C 0 T 63 s papAnu2.chr16 127134 1 + 74645514 T i papAnu2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e chlSab2.chr16 115336 0 + 75148670 C e rheMac3.chr16 123122 0 + 80904711 C e nomLeu3.chr19 213959 62 - 81552678 T e ponAbe2.chr17 96944 120 + 73212453 T e panTro4.chr17 208410 0 + 82630442 C a score=54979.000000 s hg38.chr17_GL383563v3_alt 232973 63 + 375691 TGACAGCAGGATTACCCTTCGGAGCCGCGAGCGCTGGATGGGGACTCAGAATCCGCAGCATGT s panTro4.chr17 208410 63 + 82630442 TGACAGCAGGATTACCCTTCGGAGCCGTGCACGCTGGATGGGGACTCAGAATCCGCAGCATGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 96824 63 + 73212453 TGACAGCAGGATTACCCTTCAGAGCCGTGCACGCTGGATGGGGACTCAGAATGCGCAGCATGC i ponAbe2.chr17 T 120 C 0 s macFas5.chr16 128443 63 + 80997621 TGACAGCAGGATTACCCTTCCGAGCTGTGCACGCTGGATGGGGACTCGGAATCCGCAGCGTGT i macFas5.chr16 T 63 T 63 s papAnu2.chr16 127135 63 + 74645514 TTACAGCAGGATTATCCTTCCGAGCTGTGCACGCTGGATGGGGAGTCAGAATCCATAGCGTGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115336 33 + 75148670 ------------------------------ACATTGGATGGGAAGTCAGAGTCCATAGAGTGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I e rheMac3.chr16 123122 0 + 80904711 C e nomLeu3.chr19 213959 62 - 81552678 T a score=46620.000000 s hg38.chr17_GL383563v3_alt 233036 21 + 375691 TGACAGCAGGATTACCCTTCG s panTro4.chr17 208473 21 + 82630442 TGACAGCAGGATTACCCTTCG i panTro4.chr17 C 0 I 438 s ponAbe2.chr17 96887 21 + 73212453 TGACAGCAGGATTACCCTTCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213897 21 - 81552678 TGACAGCGGGATCAGCCTTCA i nomLeu3.chr19 T 62 C 0 s rheMac3.chr16 123122 21 + 80904711 TGACAGCAGGATTACCCTTCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 128443 21 + 80997621 TGACAGCAGGATTACCCTTCC i macFas5.chr16 T 63 C 0 s papAnu2.chr16 127198 21 + 74645514 TTACAGCAGGATTATCCTTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115369 21 + 75148670 TGACAGCAGGATTACCCTTCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I a score=445231.000000 s hg38.chr17_GL383563v3_alt 233057 194 + 375691 GAGCCGTGCGCGCTGGATGGGGACTCAGAATCCGCACCGTGTGTGTGACCACTGCATGGTGGTTTTCCGCTGATCGGTGTGAGGAGGGCATGAAGCATGTCACAAGGCCTATTGGACACATTTGTGACCACACAGGACCAACGCAGGAAGAGGTCAGCATTTGCTCTTCTAAGCGTGGAGGATGACCCTTCCAC s panTro4.chr17 208932 194 + 82630442 GAGCCGTGCGCGCTGGATGGGGACTCAGAATCCACACCGTGTGTGTGACCACGGCATGGTGGTTTTCCACTGATCGGTGTGAGGAGGGCATGACGCATGTCACAAGGCCTGTTGGACACATTTGTGACCACACAGGACCAACGCAGGAAGAGGTCAGCATTTGCTCTTCTAAGCGTGGAGGATGACCCTTCCAC i panTro4.chr17 I 438 C 0 s ponAbe2.chr17 96908 194 + 73212453 GAGCTGTGCACACTGAATGGAGACTCAGAATCCGCACCGTGGGTGTGACCACTGCATGGTGGTTTTCCGCTGATCGATGTGAGGCGTGCATGAAGCACGTCACGAAGCCTACTGGACACATTTTTGACCACACGGGACCAATGCAGGAAGAGGTCAGCATTTGCTCTTCTAAGGGTGGAGGATGACCCTTCCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 213918 194 - 81552678 GAGCCGTGCACGCTGGGTGGGGACTCCGAATCGGCAGCGTGCGTGTGACCACTGCATGGGGGTTTTCCACTGATCGGTGTGAGCAGTGCATGAAGCACGTCAAAAGGCCTGTTGGACACATTTGTGACCACACAGGACCAACGCAGGAAGAGGTCAGCATTTGCTCTTCTAAGGGTGGAGGATGACCCTTCCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 123143 194 + 80904711 GAGCTGTGCACGCTGGATGGGGACTCGGAATCTGCAGCGTGTGTGTGACCACTGCACGGTGGTTTTCCGCTGATCGGTGTGAGGAGTGCACGAAGCACATCACAAGGCCTGTTGGACGCATCTGGGACCACGCGGGACCAACGCAGAAAGAGGTCAGCATTTGCTCTTCTAAGGGTGGAGGACGACGCTTCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 128464 194 + 80997621 GAGCTGTGCACGCTGGATGGGGACTCGGAATCCGCAGCGTGTGTGTGACCACTGCACGGTGGTTTTCCGCTGATGGGTGTGAGGAGTGCACGAAGCACGTCACAAGGCCTGTTGGACGCATCTGGGACCACGCGGGACCAACGCAGAAAGAGGTCAGCATTTGCTCTTCTAAGGGTGGAGGACGACGCTTCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 127219 194 + 74645514 GAGCTGTGCACACCGGATGGGGACTCGGAATCCGCAGCGTGTGTGTGACCACTGCATGGTGGTTTTCCGCTGATCGGTGTGAGGAGTGCACGAAGCACGTCACAAGGCCTGTTGGACGCATCTGGGACCACGCGGGACCAACGCAGAAAGAGGTCAGCATTTGCTCTTCCAAGGGTGGAGGACAACGCTTCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115390 193 + 75148670 GAGCTGTGCACGCTGGATGGGGACTCGGAATCCGC-GTGTGTGTGTGACCACTGCATGGTGGTTTTCCGCTGATCGGTGTGAGGAGTGCACGAAGCATGTCACAAGGCCTGTTGGACGCATCTGTGACCACGCGGGACCAACGCAGAAAGAGGTCAGCATTTGCTCTTCTAAGGGTGGAGGATGACGCTTTCAC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690123 227 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I a score=850994.000000 s hg38.chr17_GL383563v3_alt 233251 336 + 375691 CTGTGACCGGTATCAGC-AAAAATGGAACACAGA-ATGCAGCCattctt-ccccaaacacctgtttacaggtatatcacagctcaggtgaccaatggttgaagtgaaataaacatctcaagaatggggaactcgtggtacctgaaaattcacagtggtcaatg----caagacaaaactcagtctaaattactaatgtacacataactgcaaaaca--tgaaaatgtataagaaattatgctttgaaagtagatataaaagaatcagttaacaaaacaaatctgacccaaaattccagattgtctcaataaaacccaaaaagtagctggaaat---aaaacacactgg s panTro4.chr17 209126 336 + 82630442 CTGTGACCGGTATCAGC-AAAAATGGAACACAGA-ATGCAGCCATTCTT-CCCCAAACACCTGTTTACAGGTGTATCACAGCTCAGGTGACCAATGTTtgaagtaaaatcaacatctcaagaatggggaattcgtggtgcctgaaaattcacagcggtcaatg----aaagacaaaactcagtctaaattactaatgtacacataactgcaaaaca--tgaaaatgtgtaagaaattatgctttgaaagtagatataaaagaatcagttaacaaaacaaatctgaccccaaattccagattgtctcaataaaacccaaaaagtagctggaaat---aaaacacactgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 97102 336 + 73212453 CTGTGACTGGTATCAGC-AAAAATGGAACACAGAGATGCAGCCATTCTT-CCCCACACACCTGTTTACAGGTATATCATAGCTCAGGTgaccaatggatgaagtaaaataaaaatctcaagaatggggaactcgtggtacctgaaaattcacagtggtcaatg----aaagacaaaattcagtctaaattactaatgtacacataactacaaaaca--tgaaagtgtataagaaattatgctttgaaagtagatataaaagaatcagttaacaaaacaaacctgacccaaaattccagattgtctcaataaaacccaaaaagtagctggaaat----aaaCACACTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 214112 335 - 81552678 CTGTGACTGGTATCAGC-AGAAATGGAACACAGAGATGCAGCCATTCTTCCCCCAAACACCTGTTGACAGGGATATCATAGCTCAGGTGACCCACGGATGAAGTAAAATAAAAATCTCAAGAATGGGGAACTCGTGGTACCTGAAAATT--CAGTGGTCAATG----AAAGACAAAATTCAGTCAAAATTACTAATGTACACATAACTACAAAACA--GGAAAATGTATAAGAAATTATGCTTTGAACGTAGATATAAAAGAATCTGTTAACAAAATAAATCTGACCCAAAATTCCAGATTGTCTCAATAAAACCCAAAACGCAGCTGGAAAT----AAACACACCGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 123337 336 + 80904711 CTGTGACTGGTATCGGG-AAAAACGGAACACAGCGGTGCAGCCATTCTT-CCCCAAGCACCTGCTTACAGGTGTATCACAGCTCAGGTGACCAGCGgacgaagtaaaataaaaatctcgggaatggggaactcgtggtacccgagaattcatggtggtcaacg----aaagacaaaattcagcctaaattactgatgtacccataactacaaaaca--tgaaaatctgaaagaaattatgctttgaaagtagatataaaagaatcagttaacaaaacaaatctgacctaaagttccagattgtctcaataaaacccaaaaagtagctggaaat----aaaCACTTTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 128658 336 + 80997621 CTGTGACTGGTATCGGG-AAAAACGGAACACAGCGGTGCAGCCATTCTT-CCCCAAGCACCTGCTTACAGGTGTATCACAGCTcaggtgaccagcggacgaagtaaaataaaaatctcgggaatggggaactcgtggtacccgagaattcatggtggtcaacg----aaagacaaaattcagcctaaattactgatgtacccataactacaaaaca--tgaaaatctgaaagaaattatgctttgaaagtagatataaaagaatcagttaacaaaaCAAATCTGACCCAAAGTTCCAGATTGTCTCAATAAAACCCAAAAAGTAGCTGGAAAT----AAACACTTTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 127413 333 + 74645514 CTGTGACTGGCATCGGG-AAAGACGGAACACAGAGGTGCAGCCATTCTT-CCCCAAGCACCTGCTTACAGGTGTATCATAGCTCAGGTGACCAGCggatgaagtaaaat-aaaatctcgGGAATGGGGAACTCGTGGTACCCGAGAATTC--GGTGGTCAACG----AAAGACAAAATTCAGCCTAAATTACTGATGTACCCATAACTACAAAAca--tgaaaatctgaaagaaattatGCTTTGAAAGTAGATAGAAAAGAATCAGTTAACAAAACAAATCTGACCCAAAGTTCCAGATTGTCtcaataaaacccaaaaagtagCTGGAAAT----AAACACTTTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115583 336 + 75148670 CTGTGACTGGTATCGGG-AAAAACGGAACACAGAGGTGCAGCCATTCTT-CCCCAAGCACTTGCTTACAGGTGTATCACAGCTcaggtgaccagcggatgaagtaaaataaaaatctcgtgaatggggaactcgtggtacccgagaattcatggtggtccacg----aaagacaaaattcagcccaaattattgacgtacccataactacaaaaca--tgaaaatctgaaagaaattatgctttgaaagtagatataaaagaatcagttaacaaaaCAAATCTGACCCAAAGTTCCAAATTGTCTCAATAAAACCCAAAAAGTAGCTGGAAAT----AAACACTTTGG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15690350 337 - 61074082 CTGTGGATCACATTAGCAAAAAACAGAAATCAG--GTGCATCCAGTctg-cctaaaaaaattgctcagaagt-----agagttcatttgatcaacagatgaattaaaataaaaagctcatgaatgaggaactcgtggtaccagaaaatga--aatgatcaatgaaataaagacagagtttagtctaaataactagtgtatgtataactacaaaatgataaaaaatgtgaaggaaatgatgcttaaaatattgatgtaaaataatcagttaacaaaaataatctgaccccagatttcagattgtctcaagaaaA-GTGAAATGTGGCTTCaaaccataagatactttgg i canFam3.chr9 I 227 I 1944 e mm10.chr11 75861861 1707 + 122082543 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I a score=654182.000000 s hg38.chr17_GL383563v3_alt 233587 312 + 375691 gtgcctcatactttatgagaagagggaattaagagac-attttttcttctttgagacagggccttgctctgttacccaggctggaatgtagtggtgcagtctcagctcactgcaacctccacctccgaggctcaatcgatcctcccacctaggcttcccgagtagctgggactgcaggcgcatgccaccatgcccagctaatttattttt--gtaatttctttttaagagagatgagatttcgccattttgcccaggttggtctcagactcctatactcaagcgatcctcccacctcggcctctcaaagtgctgg s panTro4.chr17 209462 312 + 82630442 gtgcctcatactttatgagaagagggaattaagagac-atttttttttctttgagacagggccttgct--gttacccaggctggaatgtagtggtgcggtctcagctcactgcaacctccacctccgaggctcaatcgatcctcccacctaggcttcccgagtagctgggactgcaggcgcatgccaccatgcccagctaatttttttttttgtaatttctttttaagagagatgagatttcgccattttgcccaggttggtctcagactcctatactcaagtgatcctcccaccttggcctctcaaagtgctgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 97438 308 + 73212453 GTCCCTCATACTTTATAAGAAGAGGGAATTAAGAGAC-----ttttttctttgagacaggaccttgctctgttacccaggctggaatgcagtggtgcagtctcagctcactgcaacctccacctccgaggctcaattgatcttcccaccgaggcctcccgagtagctgggactgcacgcatgtgccaccgtgcccagctaattttttttt-tgtaattt-tttttaagagagatgagatttcaccattttgcccaggttggtctcagactcctatactcaagcgatcctcccatcttggcctctcaaagtgctgg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 214447 297 - 81552678 GTCCCTCATACTTTATAAGAAGAGGGAATTAAGAGAt---ttttttttctttgagacagggccttgctctattacccaggctggaatatagtggtacagcttcggctcactgcaacccccacccccgaagctcagtcgatccacctacc-aggcctcccgagtagctgggactgcag--------cgccatgcccagctaaatttttttt--gtaa----tttttgagagaggtgagatttcgccattttgcccaggttggtcttggactcctgtactcaagcgatcttcccaccgtggcctctcaaagtgctgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 123673 307 + 80904711 GTTCCTCACACTTTATAAGAAGAGGG----AAGAGACtttttttttttcttcgaggcacggccttgctctgtcacccaggcaggaacgtggtggtgcagcctcagctcactgcaacctccacctccgaggctcaatcgatcctcccacctaggcctcccgagtagccgggactgcaggcgtgtgccaccatgccaaactaatttttttt---gtaattt-ctttaaagagagatgagatttcaccattttgcccaggttggtcttggagtcctagactccagcgatcctcccaccttggcctctcaaagtgctgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 128994 306 + 80997621 GTTCCTCACACTTTATAAGAAGAGGG----AAGAGAC-ttttttttttcttcgaggcacggccttgctctgtcacccaggctggaacgtggtggtgcagcctcggctcactgcaacctccacctccgaggctcaatcgatcctcccacctaggcctcccgagtagccgggactgcaggcgtgtgccaccatgccaaactaatttttttt---gtaattt-ctttaaagagagatgagatttcaccattttgcccaggttggtcttggactcctagactccagcgatcctcccaccttggcctctcaaagtgctgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 127746 305 + 74645514 GTCCCTCACactttataagaagaggg----aagagac-ttttttttttctttgaggcacggccttgctctgtcacccaggctggaacgtgGTGGtgcagcctcggctcactgcaacctccacctctgaggctcaatcgatcctcccacctaggcctcccgagtagctgggactgcaggcgtgtgccaccatgccaaactaatttttttt---gtaattt-ctttaaagaaagatgagatttcaccattttgccc-ggttggtctcggactcctagactccagcgatcctcccaccttggcctctcaaagtgctgg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 115919 303 + 75148670 GTCCCTTACACTTTATAAGAAGAGGG----AAGA----Ctttttttttcttcgaggcacggccttgctctgtcacccaggctggaacgtggtggtacagcctcggctcactgcaacctccacctccgaggctcaatcgatcctcccacctaggcctcccgagtacctgggactgcaggcgtgtgccaacatgcccaactaattatttct---gtaattt-ctttaaagagagatgagatttcaccattttgcccaggttggtctcggactcctagactccagcgatcctcccaccttggcctctcgaagtgctgg i chlSab2.chr16 C 0 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690687 1944 - 61074082 I e calJac3.chrUn_GL286409 929730 3 - 1291538 I a score=63439.000000 s hg38.chr17_GL383563v3_alt 233899 21 + 375691 gattacaggtgCCTGGCCAAG s panTro4.chr17 209774 21 + 82630442 gattacaggtgCCTGGCCAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 97746 16 + 73212453 gattacaggt-----gCCAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 214744 21 - 81552678 gattacaggtgCCTGGCCAAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 123980 21 + 80904711 gattacaggtgCCTGGCCAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 129300 21 + 80997621 gattacaggtgCCTGGCCAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128051 21 + 74645514 gattacaggtgcctggccaAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 116222 21 + 75148670 gattacaggTACCTGGCCAAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929733 21 - 1291538 GATTACAGGTGCCTGGCCAAG i calJac3.chrUn_GL286409 I 3 C 0 e mm10.chr11 75861861 1707 + 122082543 I e canFam3.chr9 15690687 1944 - 61074082 I a score=16798.000000 s hg38.chr17_GL383563v3_alt 233920 6 + 375691 AGATAT s panTro4.chr17 209795 6 + 82630442 AGATAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 97762 6 + 73212453 AGATAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 214765 6 - 81552678 AGATAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124001 6 + 80904711 AGTTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 129321 6 + 80997621 AGTTAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128072 6 + 74645514 AGTTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 116243 6 + 75148670 AGTTAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929754 6 - 1291538 AGATAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15692631 6 - 61074082 AGACAC i canFam3.chr9 I 1944 C 0 e mm10.chr11 75861861 1707 + 122082543 I a score=519130.000000 s hg38.chr17_GL383563v3_alt 233926 165 + 375691 TTTTTGTATTGTAATATAAGTAATTAGATAAGTATAGCTTTGAATATTC-AAAAGT-----------TATATATATATG----------------------CATACACATA----------------------------------------TCCACCTAAGACAACCAGCAGAATTAAAACTAGGAAAAACGTTCGTCATCCTGAAATACTTGATCTGCTGATGGCTTTTTCTTTTATT s panTro4.chr17 209801 165 + 82630442 TTTTTGTATTGTAATGTAAGTAATTAGATAAGTATAGCTTTGAATATTC-AAAAGT-----------TATATATATATG----------------------CATACACATA----------------------------------------TCCACCTAAGACAACCAGCAGAATTAAAACTAGGAAAAACATTCGTCATCCTGAAATACTTGATCTGCTGACGGCTTTTTCTTTTATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 97768 165 + 73212453 TTTTTGTATTGTAATATAAGTAATTAGATAAGTATAGCTTTGAATATTC-AAAAGT-----------TATATATATATG----------------------CATACACATA----------------------------------------TCCACCTAAGACAACCAGCAGAATTAAAACTAGGAAAAACGTTCGTCATCCTGAAATACTTGATCTGCTGACGGCTTTTTCTTTTATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 214771 163 - 81552678 TTTGTGTATTGTAATATAAGTAAGTAGATAAGTATAGCTTTGAATATTC-AAAAGT-------------TATATATATG----------------------CATACCCGTA----------------------------------------TCCACCTAAGACAACCAGCAGAATTAAAACTAGGAAAAAGGTTCATCATCCTGAAATACTTGATCTGCTGACGACTTTTTCTTTTATT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124007 161 + 80904711 TTTGTCTATTGTAATATAAGTGATTAGATAAGTATAGCTTTGAATATTC---AAGT-------------TATTTATATG----------------------CATACACATA----------------------------------------TCCAGTTAAGACAACCAGCAGAATTAAAACTAGGAAACAGCTTTGTCATCCTGAAATACTTGATCTGCTGACGGTTTTTTCTTTTATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 129327 161 + 80997621 TTTGTCTATTGTAATATAAGTGATTCGATAAGTATAGCTTTGAATATTC---AAGT-------------TATTTATATG----------------------CATACACATG----------------------------------------TCCAGTTAAGACAACCAGCAGAATTAAAACTAGGAAACAGCTTTGTCATCCTGAAATACTTGATCTGCTGACGGTTTTTTCTTTTATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128078 161 + 74645514 TTTGTCTATTGTAATATAAGTGATTAGATAAGTATAGCTTTGAATATTC---AAGT-------------TATTTATATG----------------------CATGCACATA----------------------------------------TCCAGTTAAGACAACCAGCAGAATTAAAACTAGGAAACAGTTTTGTCATCCTGAAATACTTGACCTGCTCAcggttttttcttttatt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 116249 163 + 75148670 TTTGTCTATTGTAATATACGTGATTAGATAAGTGTAGCTTTGAATATTC-AAAAGT-------------GACATATATG----------------------CATACACATA----------------------------------------TCCAGCTAAGATAACCAGCAGAATTAAAACTAGGAAACAGCTTTGTCATCCTGAAATAGTTGATCTGCTGACGGTTTTCTCTTTTATT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929760 158 - 1291538 TTTTTCTATTGTAATATAAGTGATTAGATAAGCACAGCTGTGAACATTC-AAAAGT-------------TATATACATG----------------------CATACACATA----------------------------------------TCCACCTAAGACAACCAGCAGAATTAAAACAAGGAAAAAG-TTTGTCCTCCTGAAATACCTGATCTGCT----Gttttttcttttatt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75863568 182 + 122082543 TTTTTCTATTATAATGTAAGTGATAAAACAAA-ATTGCTCTGAATATTCAAAAAGT-------------TATACATATATAATTTGTATCAATCAGTGAGTCAGTCAATCA----------------------------------------TCTATCTGCAACAACTAAGAAAATTAAAACCCTG---TGGGTTTGCCACTTTTACATACTTAATTGTCTTACttttgtttttcttttt i mm10.chr11 I 1707 I 720 s canFam3.chr9 15692637 209 - 61074082 TGTTTCTATTATAATATAAGCAATTAGACAAATACTGGCTTAAATATTT-AAACACTAatatgtgtgtatatatatata----------------------catatatatatgtatatatatatatgtatatatatatatataCTTATCTGTCCCTTTAAGACAATCAGCAGAATTTAAACTAGGGAAAAGTTTTGTCACACCAAAATACATGATTT-TTGA--GTTTTTTTTTT---- i canFam3.chr9 C 0 C 0 a score=697568.000000 s hg38.chr17_GL383563v3_alt 234091 234 + 375691 CCCT-CTTCCCTC-----------TTCCCTCCCTTGTGCTCTGTTTAT-------------------------------AATTTCTCCTTGTTGTTGTC-Cttttcctttcagtaggaattaag-tttagaataac---tctttcctcattatttccttccctgacctctggaaaatgacacaaa----caacaTCTGAAAAGGGAGTCAGTGGATATTAATTCATTCAAATCACATTTACTAAGCATCTCGTGTA--CAGTTCTAAGATTGAGCT-------AAGGAAACAAAA--- s panTro4.chr17 209966 227 + 82630442 CCCT-CTTCCCTC------------------CCTTGTGCTCTGTTTAT-------------------------------AATCTCTTCTTGTTGTTGTC-CTTTTCCTTTCAGTAGGAATTAAG-TTTACAGTAAC---TCTTTCCTCATTATTTCCTTCCCCGACCTCTGGAAAATGACACAAA----CAACATCTGAAAAGGGAGCCAGTGGATATTAATTCATCCAAATCACATTTACTAAGCATCTCGTGTA--CAGTTCTAAGATTGAGCT-------AAGGAAACAACA--- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 97933 227 + 73212453 CCCT-CTTCCCTC------------------TCTTGTGCTCTGTTTAT-------------------------------AATTTCTCCTTGTTGTTGTC-CTTTTCCTTTCAGTAGGAATTAAG-TTTAGAGTAAC---TCTTGCTTCATTATTTCCTTCCCCGACCTCTGGAAAATGACACAAA----CAACATCTGAAGAGGGAGTCAGTGGATATTAATTCATCCAAATCACATTTATTAAGCATCTCGTGTA--CAGTTCTAAGACTGAGCT-------AAGGAAACAAAA--- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 214934 235 - 81552678 CCCTCCTTCCCTC-----------TTCCCTCACTTGTGCTCTGTTTAT-------------------------------AATTTCTCCTTGTTGTTGTC-CTTTTCCTTTCAGTAGGAATTCAG-TTTAGGGTAAC---TCTTTCCTCATTATTTCCTTCCCGGACCTCTGGAAAATGACACAAA----CAACATCTGAAGAGGGGGTCAGTGGATATTAATTCATCCAAATCACATTTATTAAGCATCTCGTGTA--CAGTTCTAAGACTGAGCC-------AAGGAAACAAAA--- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124168 231 + 80904711 CCTTCCTTCCCTC-----------TTCCCTCTCTTGGGCTCTGTTTAT-------------------------------AATTTCTCC---TTGTTgtc-cttttctgttcagtaggaatcaag-tttagggtaac---tccttcctcattatttccttccctgacctcggg-aaatgacacaaa----cagcaTCTGAAGAGGGAGTCAGTGGATATTAATTCATCCAAATCACATTTATTAAGCATCTCCTGAA--CAGTTCTAAGATCGAGCT-------AAGGAAGCAAAA--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 129488 231 + 80997621 CCTTCCTTCCCTC-----------TTCCCTCTCTTGGGCTCTGTTTAT-------------------------------AATTTCTCC---TTGTTGTC-CTTTTCTGTTCAGTAGGAATCAAG-TTTAGGGTAAC---TCCTTCCTCATTATTTCCTTCCCTGACCTCGGG-AAATGACACAAA----CAGCATCTGAAGAGGGAGTCAGTGGATATTAATCCATCCAAATCACATTTATTAAGCATCTCCTGAA--CAGTTCTAAGATCGAGCT-------AAGGAAGCAAAA--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128239 231 + 74645514 ccttccttccctc-----------ttccctctcttgGGCTCTGTTTAT-------------------------------AATTTCTCC---TTGTTGTC-CTTTTCCATTCAGTAGGAATCAAG-TTTAGGGTAAC---TCCTTCCTCATTATTTCCTTCCCTGACCTCGGG-AAATGACACAAA----CAGCATCTGAAGAGGGAGTCAGTGGATATTAATTCATccaaatcacatttattaagcatctccTGTA--CAGTTCTAAGATCGAGCT-------AAGGAAGCAAAA--- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 116412 232 + 75148670 CCTTCCTTCCCTC-----------TTCCCTCTCTTATGCTCTGTTTAT-------------------------------AATTTCTCC---TTGTTGTC-CTTTTCCGTTCAGTAGGAATCAAG-TTTAGGGTAAC---TCTTTCCTCATTATTTCCTTCCCTGACCTCGGGAAAATGACACAAA----CAGCATCTGAAGAGAGAGTCAGTGGATATTAATTCATCCAAATCACATTTATTAAGCATCTCCTGTA--CAGTTCTAAGATCGAGCT-------AAGGAAGCAAAA--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 929918 245 - 1291538 ccctccttccctcttccttctctcttccctctcttGTGCTCTGTTTAT-------------------------------AACTTCTCCTTGTTGTTGTC-CTTTCCCTTTCAGGAGGAATTATG-TCTAGGGTAAG---CCTTTCCTCATTATTTCCTTCCCCTACCTCTAGAAAGTGACACAAA-------CATCTGAAGAGAGAGTCAGTGGGTATTAATTCATCCAAATCACATTTATTCAGCATCTCGTGTACCCACTGCTAAGAGTGAGCT-------AAGGAAACACAT--- i calJac3.chrUn_GL286409 C 0 I 477 s mm10.chr11 75864470 190 + 122082543 --------CTCTC-----------TCCCAGCCCTCCGCCTTTA------------------------------------AGCTGCTCTCTGTTGTAG---CTTGTTTGTTTGGATAGAGTGAAG-------GTAGCCA-TCTTTCCTTGCTGCTTGCTTTCTTG----------------------------CCTCTAGAGAGGGAG-CAGTTGGTAtt-----attcagatagcatttatcaaccacctcttgtg-----tgctcagactgagctgggcaggggggTGGCAAAA--- i mm10.chr11 I 720 I 2 s canFam3.chr9 15692846 273 - 61074082 -CCT-CTTCCTTC-----------TtccctccctttctctctctctgtctctctgtctctctctctctcGGTTTTAAAAATTTTCTCCTTGTTCTTGCCATTTTTGCTTTGAGCAGAAATTGAGTTTTAGAGCAGCCATCTTTTCCTCATTGCTTGCTTCCCCTCCTTCAGAAAGCTGAAGCTGGCGGTCAACCCCTGAAGACAGAGTGAGTAGATattaatttattcaaataacatttattcagcacctcctatg-----tgttaagACAGAGCC-------TCGGAGAAGAAAAGA i canFam3.chr9 C 0 C 0 a score=415.000000 s hg38.chr17_GL383563v3_alt 234325 1 + 375691 G s panTro4.chr17 210193 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98160 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215169 1 - 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124399 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s macFas5.chr16 129719 1 + 80997621 T i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128470 1 + 74645514 T i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 116644 1 + 75148670 T i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15693119 1 - 61074082 T i canFam3.chr9 C 0 C 0 e mm10.chr11 75864660 2 + 122082543 I e calJac3.chrUn_GL286409 930163 477 - 1291538 I a score=1212734.000000 s hg38.chr17_GL383563v3_alt 234326 405 + 375691 CCAATGTTCTTGCAGACGGGAGGCCGGTGGCACAGATCCACAGTG-------------------------------------GGCTG----------------TCTTCT-CTCCT-TGTGAGTGTTCACGCCTCGCCTTTG--GGCCCTTCTGTTCTGGGAGGGTTCTGCTGACTTCCACCCCACAGGGTGAGTCTCCGCTCACGGCGGATG-TTCAGCGTGAGGGGGCAAAGCACAAGCAAGCGATCC-AAGCCCCCAAGAGGGTCTGAGCCACACCAGGGCAGCTGGGCAGAGCTGTGGGCAGCCTCTTCCTCCTGCC----CCTCTCCCCACCCA------GGCATCCATCTGGTCCAATCCCTTCTGAAGTGCTAACTCATTCCTAATTGAGGTGTGAGCTCAAAGCGAAGTGAGACCC--CTTCCAGGAG-GATTCATGTATTTGT-GTTTTAAAAGATGACACTTTAAGGCC s panTro4.chr17 210194 407 + 82630442 CCAATGTTCTTGCAGACGGGAGGCCGGTGGCACAGATCCACAGTG-------------------------------------GGCTG----------------TCTTCTTCTCCTGTGTGAGTGTTCACGCCTCGCCTTTG--GGCCCTTCTGTTCTGGGAGGGTTCTGCTGACTTCCACCCCACAGGGTCAGTCTCTGCTCATGGCAGATG-TTCAGCGTGAGGGGGCAAAGCACAAGCAAGCGATCC-AAGCCCCCAAGAGGGTCTGAGCCACACCAGGGCAGCTGGGCAGAGCTGTGGGCAGCCGCTTCCTCCTGCC----CCTCTCCCCACCCA------GGCATCCATCTGGTCCAATCCCTTCTGAAGTGCTAACTCATTCCTAATTGAGGTGTGAGCTCAAAGCGAAGTGAGACCC--CTTCCAGGAG-GATTCATGTATTTGT-GTTTTAAAAGATGACACTTTAAGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98161 406 + 73212453 CCAATGTTCTTGCAGACGGGAGGCCGGTGGCACAGATCCACAGTG-------------------------------------GGCTC----------------TCTTCT-CTCCTGTGTGAGTGTTCACGCCTTGCCTTCG--GGCCCTTCTGTTCTGGGAGGGTTCCGCTGACTTCCACCCCACAGGGTGAGTCTCTGCTCGCGGCGGATG-TTCAGCGTGAGGGGACAAAGCACAAGCAAGCGATCC-AAGCCCCCAAGAGGGTCTGAGCCACACCAGGGCAGCTGGGCAGAGCTGTGGGCAGCCTCTTCTTCCTGCC----CCTCTCCTCACCCA------GGCATCCATCTGGTCCAATCCCTTCTAAAGTGCTAACTCATTCCTAATTGAGGTGTGAGCTCAAAGCAAAGTGAGGCCC--CTTCCAGGAG-GATTCATGTATTTGT-GTTTTAAAAGATGATACTTTAAGGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215170 406 - 81552678 CCGATGTTCTTGCAGATGGGAGGCCGGTGGCACAGATCCACAGTG-------------------------------------GGCTG----------------TCTTCT-CTGCTGCGTGAGTGTTCACGCCTTGCCTTTG--GGCCCTTCTGTTCTGAGAGGGTTCCGCTGACTTCCACCCCACATGGTGAGTCTCTGCTCGCGGTGGATG-TTCAGCGTGAGGGGGCAAAGCACAAGCAAGCGATCC-AAGCCCCCAAGAGGGTCTGAGCCGCACCAGGGCAGCTGGGCAGAGCTGTGGGCAGCCTCCTCCTCCTGCC----CCTCTCCCCACCCA------GGCATCCATCTGGTCCAATCCCTTCTAAAGTGCTAACTCATTCCTAATTGAGGTGTAAGCTCAAAGCGAAGTGAGACCC--CTTCCAGGAG-GATTCATGTATTTGT-GTTTTAAAAGATGACACTTTAAGGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124400 404 + 80904711 CCAATGGTCTTGCAGACGGGAGGCCGAGGGCACAGATCCACAGTG-------------------------------------GGCTG----------------TCTTCT-CTCCTGCATGGGTGTTTATTCCTTGCCTTTG--GGTTCTTCTGTTCTGGGAGGGCTCCGCTGACTTCCAGCC--CAGGGTGAGCCTCGGCTCGCGGCAGATG-TTCAGCGTGAGGGCGCAAAGCACAAGGAAGGGATCC-AAGCCCCCAAGAGGGTCTGAGCCACACCAGGACAGCTGGGCAGAGCTGTGGGCAGCCTCTTCCTCCTGCC----TCTCTCCCCACCCG------GGCATCCATCCGGTCCAATCCCTTCTAAAGTGCTAACTCATTCCTAATTGAGGTGTGAGCTCAAAGCGAAGTGAGACCCCTCTTCCAGGAG-GATTCACATATTTGT-GTTTTAAAAGATGACACTTTAAGG-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 129720 406 + 80997621 CCAATGGTCTTGCAGACGGGAGGCCGGGGGCACAGATCCACAGTG-------------------------------------GGCTG----------------TCTTCT-CTCCTGCATGGGTGTTTATTCCTTGCCTGTG--GGTTCTTCTGTTCTGGGAGGGCTCCGCTGACTTCCAGCC--CAGGGTGAGCCTCTGCTCGCGGCAGATG-TTCAGCGTGAGGGCGCAAAGCACAAGGAAGGGATCC-AAGCCCCCAAGAGGGTCTGAGCCGCACCAGGACAGCTGGGCAGAGCTGTGGGCAGCCTCTTCCTCCTGCC----TCTCTCCCCACCCG------GGCATCCATCCGGTCCAATCCCTTCTAAAGtgctaactcattcctaattgaggtgtgagctcaaagcgaagtgagacccctcttccaggag-gattcatgtatttgt-gttttaaaagatgacactttaaggcc i macFas5.chr16 C 0 I 8 s papAnu2.chr16 128471 406 + 74645514 CCAATGGTCTTGCAGACGGGAGGCCGGGGGCACAGATCCACAGCG-------------------------------------TGCTG----------------TCTTCT-CTCCTGCATGAGGGTTTATGCCGTGCCTTCG--GGCCCTTCTGTTCTGGGAGGGTTCCACTGACTTCCAGCC--CAGGGTGAGCCTCTGCTCGCGGCAGATG-TTCAGCGTGAGGGCGCAAAGCACAAGGAAGGGATCC-AAGCCCCCAAGAGGGTCTGAGCCGCACCAGGACAGCTGGGCAGAGCTGTGGgcagcctcttcctcctgcc----tctctccccaccca------GGCATCCATCCGGTCCAATGCTTTCTAAAGTGCTAACTCGTTCCTAATTGAGGTGTGACCTCAAAGCGAAGTGAGACCCCCCTTCCAGGAG-GAttcatgtatttgt-gttttaaaagatgACACTTTAAGGCc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 116645 404 + 75148670 CCAATGGTCTTGCAGACGGGAGGCCAGGGGCACAGATCCACAGTG-------------------------------------GGCTG----------------TCTTCT-CTCCTGCATGAGTGTTTATGCCTTGCCTTCG--GGCCCTTCTGTTCTGGGAGGGTTCCGCTGACTTCCAGCC--CAGGGTGAGCCTCTGCTTGCGGCAGATG-TTCAGCGTGAGGGGGCAAAGCACAAGGAAGGGATCC-AAGCCCCCAAGAGGGTGTGAGCCGTGCCAGGACAGCTGGGCAGAGCTGTGGGCAGCCTCTTCCTCCTGCC----TCTCTCCCCACCCA------GGCATCCATCCGGTCCAATCCCTTCTAAAGtgctaactcattcctaattgaggtgtgagctcaaagcgaagtgagaccc--cttccaggag-gattcatgtatttgt-gttttaaaagatgacactttaaggcc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 930640 434 - 1291538 TCAGTGTTGGTGCAGATGGTGG--CCGTGGCACTGATCCACAGTGAGGAAACACATCCAGTGTTGGTGCAGATGGTGGCCGTGGCTG----------------TCTTCT-CTCCCCCATGAGAGTTCATGCCCTGCCTTCAT-GGCTCTTCTGTTCTGA-AGGGTTCCACTGACTTCAACCCCTCAGGGTGAGCCTCTGCTCGCTGCAGGTGTTTCAGTGTGGTGGG--AAAGCACAAGCAGGCGATCT-AAGCCCACAGGAAGGTCTGAGCTGTGCCAGGGCAGCTGGGCAGAGCTGTGGGCAGCGTCATCCTCCTGCC----CC-CTCCCCACCCGTGGGGTGGAATCC-----GTCCAATCCCTTCTAAAGTGCTAACTCACTCCTAATTGAGGTGTTAGCTCGAAGCTAAATGAGACCC--CTCCCAGGAG-TATTCATGTATTTGCAATTTTAAAAGATGTCATTT------- i calJac3.chrUn_GL286409 I 477 C 0 s mm10.chr11 75864662 296 + 122082543 CAAGTGTTCTTGGAGACAGG----CTGCTTCCCCCCTCCCAAGTG-------------------------------------AGC-------------------CTTCC-CTCCTGCGCA--------------------G--GGTCCTT----------------------------------------------------------GGTG-TTCCG--------------GCACAAACTGGAG-TCT-GTACCCACGGGAGGGGTGTGGGAGAACCAGGGCCACTGGGCAGAGCTGT---CAGCTCCCTTCCCCTGGCTGGTTCCCTCCCTCCCTA------GACAACTTAGTAGCTCTCAGCTTTCAAAAGTGTCAGCTC--------CTGAGGTGTTAACCAGAGAC----TGCGACCC--CTCCCAGGGGCCATTAGCACATTTGC-ATTTTGAAGAATAACACTTTCTTTTT i mm10.chr11 I 2 I 9 s canFam3.chr9 15693120 383 - 61074082 CAAATGTTCTTGCAAATGAGTGGTCCAAGGCATAAATCCCTACCA-------------------------------------GGCTGGGGTCTGTGTCCATGTTTTCCT-TCCACATGAGAGTGTTCATGCTCTGCCTTCGTGAGCTGTTCCGCGCTGATGCAGCTTCCCT-ACATCCATCCCCCAAG--------CACCTGGGGTGAAACC-TTCAGTCTG-TGATGTAGAGTGTGAGTAATCAATCCTGAGCCAACAGTGGGCTTTGAGAAGCACCAGGGCAGCGGGACAGAGCTCT------CCTCCTCCCCCAGGC----TCTC----CACTTA------------------------TCCCTTGGGAAGTGCTAACTCA----GAACTGAGGCTTTAGCAGAAAACTAAATGAGACTC--CTCTCAGGAG-TATTTGTGTATTTGC-ATTTTAAAGAATGCTACTTTAAAACC i canFam3.chr9 C 0 C 0 a score=4199.000000 s hg38.chr17_GL383563v3_alt 234731 8 + 375691 --CCAGTGgt s panTro4.chr17 210601 8 + 82630442 --CCAGTGgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98567 8 + 73212453 --CCAGTGGT i ponAbe2.chr17 C 0 I 3 s nomLeu3.chr19 215576 8 - 81552678 --CCAgtggt i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 128877 8 + 74645514 --cctgtggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 117049 8 + 75148670 --CCtgtggg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 931074 5 - 1291538 -----GCGat i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75864967 8 + 122082543 --ttggtggt i mm10.chr11 I 9 C 0 s canFam3.chr9 15693503 7 - 61074082 TCCAGGT--- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 124804 0 + 80904711 C e macFas5.chr16 130126 8 + 80997621 I a score=13319.000000 s hg38.chr17_GL383563v3_alt 234739 14 + 375691 gtgtgtgtgtgtgt s panTro4.chr17 210609 14 + 82630442 gtgtgtgtgtgtgt i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 215584 14 - 81552678 gtgtgtgtgtgtgt i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 128885 12 + 74645514 --gtgtgtgtgtgt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 117057 12 + 75148670 --gtgtgtgtgtgt i chlSab2.chr16 C 0 I 2 s calJac3.chrUn_GL286409 931079 14 - 1291538 gtgtgtgcatatgc i calJac3.chrUn_GL286409 C 0 I 4 s mm10.chr11 75864975 11 + 122082543 ---gctggggatga i mm10.chr11 C 0 I 2 s canFam3.chr9 15693510 9 - 61074082 ----GTGTGTGTG- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 124804 0 + 80904711 C e macFas5.chr16 130126 8 + 80997621 I e ponAbe2.chr17 98575 3 + 73212453 I a score=6778.000000 s hg38.chr17_GL383563v3_alt 234753 5 + 375691 gtgtg s panTro4.chr17 210623 5 + 82630442 gtgtg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 215598 5 - 81552678 gtgtg i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 130134 5 + 80997621 GTGTG i macFas5.chr16 I 8 C 0 s calJac3.chrUn_GL286409 931097 5 - 1291538 atgtg i calJac3.chrUn_GL286409 I 4 C 0 s mm10.chr11 75864988 5 + 122082543 ctctg i mm10.chr11 I 2 C 0 s canFam3.chr9 15693519 5 - 61074082 GTGTG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 117069 2 + 75148670 I e papAnu2.chr16 128897 0 + 74645514 C e rheMac3.chr16 124804 0 + 80904711 C e ponAbe2.chr17 98575 3 + 73212453 I a score=-4364.000000 s hg38.chr17_GL383563v3_alt 234758 24 + 375691 tg------------------------------------------------------------------------tgtgCGTGCACCTGCATGCATG s panTro4.chr17 210628 96 + 82630442 tgCACCTGTGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCTATCATCCCTGTGCTCCCCAGTGGGGTGTGTGTGTGTGCGTGCACCTGTGTGCACG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98578 24 + 73212453 ------------------------------------------------------------------------TGTGTGTGTGCACCTGTGTGCATG i ponAbe2.chr17 I 3 C 0 s nomLeu3.chr19 215603 14 - 81552678 ----------------------------------------------------------------------------------CACCTGCGTGCATG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 130139 24 + 80997621 ------------------------------------------------------------------------TGTGTGTGTCCACCTGCGTGCATG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128897 17 + 74645514 -------------------------------------------------------------------------------gtccacctgCGTGCATG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 117071 17 + 75148670 -------------------------------------------------------------------------------gtgCACCTGCGTGCGTG i chlSab2.chr16 I 2 C 0 s calJac3.chrUn_GL286409 931102 24 - 1291538 ------------------------------------------------------------------------tgtgtaggtgcaccttcaagcatg i calJac3.chrUn_GL286409 C 0 I 703 s mm10.chr11 75864993 13 + 122082543 ----------------------------------------------------------------------------------tgtctgag-gcatg i mm10.chr11 C 0 C 0 s canFam3.chr9 15693524 5 - 61074082 ------------------------------------------------------------------------------------------TGTAT- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 124804 0 + 80904711 C a score=91103.000000 s hg38.chr17_GL383563v3_alt 234782 41 + 375691 CTGGTGAGCCAGGGAGAAAGCCCCCA--TCATCCCTGTGCTCC s panTro4.chr17 210724 41 + 82630442 CTGGTGAGCCAGGGAGAAAGCCCCTA--TCATCCCTGTGCTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98602 41 + 73212453 CTGGTGAGCCAGGGAGAAAGCCCCCA--TCATCCCTGTGCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215617 41 - 81552678 CTGGTGAGCCAGGGAGAAAGCCTCCG--TCATCATTGTGCTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124804 2 + 80904711 -----------------------CC------------------ i rheMac3.chr16 C 0 I 1 s macFas5.chr16 130163 41 + 80997621 CTGGTGAGCCAGGGAGAAAGCCCCCA--GCATCACTGTGCTTC i macFas5.chr16 C 0 T 77 s papAnu2.chr16 128914 41 + 74645514 CTGGTGAGCCAGGGAGAAAGCCCCCA--GCATCACTGTGCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 117088 41 + 75148670 CTGGTGAGCCAGGGAGACAGCCCCCA--GCATCACTGTGCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 931829 40 - 1291538 TTGGTGAGCCAGGGAGAAAGCCCCCA--TCATCCCTG-GCTTC i calJac3.chrUn_GL286409 I 703 C 0 s mm10.chr11 75865006 39 + 122082543 ----ccaggcaagggcttgaccactaagccatcccTTTCCTTC i mm10.chr11 C 0 C 0 s canFam3.chr9 15693529 40 - 61074082 -TGGTGAGTCAGAGAGAAAGCCTCCA--CTGTCCTCGAGCTCA i canFam3.chr9 C 0 C 0 a score=9000.000000 s hg38.chr17_GL383563v3_alt 234823 2 + 375691 CC s panTro4.chr17 210765 2 + 82630442 CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98643 2 + 73212453 CC i ponAbe2.chr17 C 0 T 70 s nomLeu3.chr19 215658 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124807 2 + 80904711 CC i rheMac3.chr16 I 1 C 0 s macFas5.chr16 130127 2 + 80997621 CC i macFas5.chr16 T 77 C 0 s papAnu2.chr16 128955 2 + 74645514 CC i papAnu2.chr16 C 0 T 77 s chlSab2.chr16 117129 2 + 75148670 CC i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 931869 2 - 1291538 CC i calJac3.chrUn_GL286409 C 0 T 71 s canFam3.chr9 15693569 2 - 61074082 CC i canFam3.chr9 C 0 C 0 e mm10.chr11 75865045 0 + 122082543 C a score=546.000000 s hg38.chr17_GL383563v3_alt 234825 1 + 375691 A s panTro4.chr17 210767 1 + 82630442 A i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 215660 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s mm10.chr11 75865045 1 + 122082543 A i mm10.chr11 C 0 C 0 e canFam3.chr9 15693571 0 - 61074082 C e calJac3.chrUn_GL286409 931871 71 - 1291538 T e chlSab2.chr16 117131 1 + 75148670 I e papAnu2.chr16 128957 77 + 74645514 T e rheMac3.chr16 124809 0 + 80904711 C e macFas5.chr16 130129 0 + 80997621 C e ponAbe2.chr17 98645 70 + 73212453 T a score=5348.000000 s hg38.chr17_GL383563v3_alt 234826 2 + 375691 GT s panTro4.chr17 210768 2 + 82630442 GT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 215661 2 - 81552678 GT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124809 2 + 80904711 GT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 130129 2 + 80997621 GT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128880 2 + 74645514 gt i papAnu2.chr16 T 77 C 0 s chlSab2.chr16 117132 2 + 75148670 GT i chlSab2.chr16 I 1 I 273 s mm10.chr11 75865046 2 + 122082543 GT i mm10.chr11 C 0 I 3 e canFam3.chr9 15693571 0 - 61074082 C e calJac3.chrUn_GL286409 931871 71 - 1291538 T e ponAbe2.chr17 98645 70 + 73212453 T a score=2800.000000 s hg38.chr17_GL383563v3_alt 234828 1 + 375691 G s panTro4.chr17 210770 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 215663 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124811 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 130131 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128882 1 + 74645514 g i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 117407 1 + 75148670 g i chlSab2.chr16 I 273 C 0 s mm10.chr11 75865051 1 + 122082543 G i mm10.chr11 I 3 C 0 e canFam3.chr9 15693571 0 - 61074082 C e calJac3.chrUn_GL286409 931871 71 - 1291538 T e ponAbe2.chr17 98645 70 + 73212453 T a score=6152.000000 s hg38.chr17_GL383563v3_alt 234829 2 + 375691 GG s panTro4.chr17 210771 2 + 82630442 GG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 215664 2 - 81552678 GG i nomLeu3.chr19 C 0 I 14 s rheMac3.chr16 124812 2 + 80904711 GG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 130132 2 + 80997621 GG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 128883 2 + 74645514 gg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 117408 2 + 75148670 gg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 931800 2 - 1291538 ga i calJac3.chrUn_GL286409 T 71 C 0 s mm10.chr11 75865052 2 + 122082543 GG i mm10.chr11 C 0 I 6 e canFam3.chr9 15693571 0 - 61074082 C e ponAbe2.chr17 98645 70 + 73212453 T a score=175183.000000 s hg38.chr17_GL383563v3_alt 234831 70 + 375691 GTGTG--------TGTGTGTG--CACCTGCGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCCGTCATCCCTGTGCTCCCC s panTro4.chr17 210773 68 + 82630442 GTGTG--------TGCGTG----CACCTGCGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCCATCATCCCTGTGCTCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98575 70 + 73212453 GTGTG--------TGTGTGTG--CACCTGTGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCCATCATCCCTGTGCTCCCC i ponAbe2.chr17 T 70 C 0 s nomLeu3.chr19 215680 70 - 81552678 gtgtg--------tgtgtgtg--tgtgCGCGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCCATGATCCCTGTGCTCCCC i nomLeu3.chr19 I 14 C 0 s rheMac3.chr16 124814 72 + 80904711 GTGTG--------TGTGTGTGTCCACCTGCGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCCAGCATCACTGTGCTTCCC i rheMac3.chr16 C 0 I 1 s macFas5.chr16 130134 72 + 80997621 GTGTG--------TGTGTGTGTCCACCTGCGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCCAGCATCACTGTGCTTCCC i macFas5.chr16 C 0 I 1 s papAnu2.chr16 128885 72 + 74645514 gtgtg--------tgtgtgtgtccacctgCGTGCATGCTGGTGAGCCAGGGAGAAAGCCCCCAGCATCACTGTGCTCCCC i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 117410 70 + 75148670 gtgtg--------tgtgtgtg--CACCTGCGTGCGTGCTGGTGAGCCAGGGAGACAGCCTCCAGCATCACTGTACTCCCC i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 931802 69 - 1291538 gtgtg--------tgtgCCCA--CACCTGCGAGCATGTTGGTGAGCCAGGGAGAAAGCCCCCATCATCCCTG-GCTTCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75865060 75 + 122082543 GTTTAAAACTCACTGTGTGTT--TGCATGTGTCC---TTGGTGAGTCAGGAAGAGAGCTCACTCCACCATGCAGCTGCCT i mm10.chr11 I 6 C 0 s canFam3.chr9 15693571 4 - 61074082 --------------------------CTGC-------------------------------------------------- i canFam3.chr9 C 0 C 0 a score=755.000000 s hg38.chr17_GL383563v3_alt 234901 1 + 375691 T s panTro4.chr17 210841 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98645 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215750 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 931871 1 - 1291538 T i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75865135 1 + 122082543 T i mm10.chr11 C 0 C 0 e canFam3.chr9 15693575 0 - 61074082 C e chlSab2.chr16 117480 1 + 75148670 I e papAnu2.chr16 128957 1 + 74645514 I e rheMac3.chr16 124886 1 + 80904711 I e macFas5.chr16 130206 1 + 80997621 I a score=145568.000000 s hg38.chr17_GL383563v3_alt 234902 57 + 375691 CAACTCCAGTGGGAGTGCACAGATTCATAAAATTCATCCTGCCTGGAAAGTCTGCTG s panTro4.chr17 210842 57 + 82630442 CAACTCCAGTGGGAGTGCACAGATTCATAAAATTCATCCTGCCTGGAAAGTCTGCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98646 57 + 73212453 CAACTCCAGTGGGAATGCACAGATTCATCAAATTCATCCTGCCTGGAAAGTCTGCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215751 56 - 81552678 CAACCCCAGTGGGAGTGCACAGATTCATCAAATTCATCCTGCCTGGAAAGTCCA-TG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 124887 57 + 80904711 CAACCCCGGTGGGAGTGCACGGATTCATCAAATTCATCCTGCCTGGAAAGTCCGCTG i rheMac3.chr16 I 1 M 143 s macFas5.chr16 130207 57 + 80997621 CAACCCCGGTGGGAGTGCACGGATTCATCAAATTCATCCTGCCTGGAAAGTCCGCTG i macFas5.chr16 I 1 I 2 s papAnu2.chr16 128958 57 + 74645514 CAACCCCGGTGGGAGTGCACAGATTCATCAAATTCATCCCGCCTGGAAAGTCCGctg i papAnu2.chr16 I 1 I 4 s chlSab2.chr16 117481 57 + 75148670 CAACCCCAGTGGGAGTGCACAGATTCATCAAATTCATCCTGCCTGGAAAGCCCGCTG i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 931872 46 - 1291538 TAACCCCGGTAGGAGCAC-----------AGATTCATCCTGCCTGGAAAGTCCGCTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75865136 13 + 122082543 -----------------------------------------CCCTGAACCCCTG--- i mm10.chr11 C 0 I 1 s canFam3.chr9 15693575 24 - 61074082 ---------------------------------TCACCCTGTCTGAAAAGCCTCCAG i canFam3.chr9 C 0 C 0 a score=4573.000000 s hg38.chr17_GL383563v3_alt 234959 7 + 375691 CCTCCCC-- s panTro4.chr17 210899 7 + 82630442 CCTCCCC-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98703 7 + 73212453 CCTCCCC-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215807 7 - 81552678 CCTCCCC-- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 130266 7 + 80997621 CCCCCCG-- i macFas5.chr16 I 2 C 0 s papAnu2.chr16 129019 7 + 74645514 cccgccc-- i papAnu2.chr16 I 4 C 0 s chlSab2.chr16 117538 7 + 75148670 CCCCCCC-- i chlSab2.chr16 C 0 I 4 s calJac3.chrUn_GL286409 931918 7 - 1291538 CCTCGCC-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75865150 6 + 122082543 TCAGCC--- i mm10.chr11 I 1 C 0 s canFam3.chr9 15693599 8 - 61074082 -TTCTTTGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 124944 143 + 80904711 M a score=10307.000000 s hg38.chr17_GL383563v3_alt 234966 13 + 375691 ATGCTGCAGGTGG s panTro4.chr17 210906 13 + 82630442 ATGCTGCAGGTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98710 13 + 73212453 ATGCTGCAGGTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215814 13 - 81552678 ATGCTGCAGGTGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 130273 5 + 80997621 ---CCACT----- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 129026 5 + 74645514 ---ccact----- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 931925 13 - 1291538 ATGCTGCAGGTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75865156 12 + 122082543 AT-CTGTGGGTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15693607 13 - 61074082 GTACTGCTGATGG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 117545 4 + 75148670 I e rheMac3.chr16 124944 143 + 80904711 M a score=3450.000000 s hg38.chr17_GL383563v3_alt 234979 2 + 375691 CC s panTro4.chr17 210919 2 + 82630442 CC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98723 2 + 73212453 CT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215827 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 117549 2 + 75148670 CT i chlSab2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 931938 2 - 1291538 CC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75865168 2 + 122082543 CT i mm10.chr11 C 0 C 0 s canFam3.chr9 15693620 2 - 61074082 CT i canFam3.chr9 C 0 C 0 e papAnu2.chr16 129031 0 + 74645514 C e rheMac3.chr16 124944 143 + 80904711 M e macFas5.chr16 130278 0 + 80997621 C a score=4223948.000000 s hg38.chr17_GL383563v3_alt 234981 1339 + 375691 GGCT--------GGCTCCC------CTGTACCCAGTTGG--AGGGCCCCGCCCTCATCAGAAGATGCGCTGGAAATCACACCCCAGGAAAGATAGA----GCACCTGCCCC--------TGTCCTTTCTTCCAAATCCCC-----CCTGGGGCAGCAAAGCTCCCCACTCAGCCCAGGAGAGCACAGCTTTCTCCAGAGCCTGAGTGAG-----------TTTCCTCTTCATTCCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGGAGGCAGGC--AACTGCCAGCACAGTAGAAAGGAAAAACG-GCAGTGAG-----AAACAGAATTCTGAGGGTG----CTGTTTTCTTGACAGATGATTTAAACACCTCGGCTAGATTATTTCAGAACTAGAGGAAA----TGCTTTGGCTTCCATTAA----CCCCTGGCCGGGGACTGGCTCCTGTGAGGCTTCTACAC-AATTACCGGTAAGG------------AGCATTTGCCAGTCGCAGAGGGAGGTGTTGCCCAACGCTGGCTCCCGATGCCTGTAGGGCTGCGTGCCCCTGGATCAGGGAGAACCCT--GGGACAGGTCGCCAAGCTTCATCTCTGGCCTCACCCT------GCCTTGTAGCCCAGCCTCGGGGTCTGTGCCCCGTGGGCACCCCATGGCCTTTGCATCATCTCTCACGTCACCTGTGATGAGGAAAGGTCCCTACAAGCTGCTGAGAACAG--GGGCCC-----CTGTCTTCCCTCTGGTCCTGCGCGCCATCCTCTCCCTTTGTCCAG-ATGCT-CTTG-TAAGCTCAGCAAATGCATGGAGGCtaatgacact-ttcatctgctgctcttaatgacttgtgttgtcaacatttgaca--gac-tccc-ctcactttcaactggcacgcggcatgaaatcctttggagccccagtactgaggctgc----------tctgacaccggtttgagagagggcaggcctgttacaatggtgattggctgcgaagc-cgc-ctctgttcccagacggagtgggctgcatgcaggaaatgaataggggctggaggcggaaaattggacaggccaattagaccgagccaggtcttttcagacgagcgtcatgattttgattcaattcccaggacaacaaatgtgcctgtgtttaaacacagtctcagaaatatgttctcccaagccaaagtgaaaccctgtctgggc--tga-cc-CCAATCGGCAGGGCTCGAGGGTGGTGCAGAGCGGGCGGCCTGCATCTGGGGACACtttttttgattacgtatttgattagtggctc-atttccgacgggtcttgttccctgct-ggggaaagcctctagttctgaagtcccattgcttcctctgtcttcca-------------------cagtcatcactgtctccctgaccacgtttagctctttggtttt-t-cc------------ctgcattctggga s panTro4.chr17 210921 1341 + 82630442 GGCT--------GGCTCCC------CTGTACCCAGTTGG--AGGGCCCCGCCCTCATCAGAAGATGCGCTGGAAATCACACCCCAGGAAAGATAGA----GCACCTGCACC--------TGTCCTTTCTTCCAAATCCCC-----GCCGGGGCAGCAAAGCTCCCCACTCAGCCCAGGAGAGCACAGCTTTCTCCAGAGCCTGAGTGAG-----------TTTCATCTTCATTCCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGAAGGCAGGC--AACTGCCAGCACAGTAGAAAGGAAAAACG-GCAGTGAG-----AAACAGAATTCTGACGGTG----CTGTTTTCTTGACAGATGATTTAAACACCTCGGCTAGATTATTTCAGAACTAGAGGAAA----TGCTTTGGCTTCCATTAA----CCCCTGGCCGGGGACTGGCTCCTGTGAGGCTTCCACAC-AATTACCGGTAAGG------------AGCATTTGCCAGCCGCAGAGGGAGGTGTTGCCCAACGCTGGCTCCCGATGCCTGTAGGGCTGCGTGCCCCTGGATCAGGGAGAACCCT--GGGACAGGTCGCCAAGCTTCACCTCTGGCCTCACCCT------GCCTTGTACCCCAGCCTCGGGGTCTGTGCCCCATGGGTGCCCCATGGCCTTTGCATCATCTCTCACGTCACCTGTGATGAGGAAAGGTCCCTACAAGCTGCTGAGAACAG--GGGCCC-----CTGTCTTCTCTCTGGTCCTGCGCACCATTCTCTCCCTTTGTCCAG-ATGCT-CTTG-TAAGCTCAGCAAATGCATGGAGGCTAATGACACT-TTCATCTGCTGCTCTTAATGACTTGTGTTGTCAACATTTGACACAGAC-TCCC-CACACTTTCAACTGGCACGCGGCATGAAATCCTTTGGAGCCCCGGTACTGAGGCTGC----------TCTGACACCGGTTTGAGAGAGGGCAGGCCTGTTACAATGGTGTTTGGCTGCGAAGC-CGC-CTCTGTTCCCAGACGGAGTGGGCTGCACGCAGGAAACGAATAGGGGCTGGAGGCGGAAAATTGGACAGGCCAATTAGACCGAGCCAGGTCTTTTCAGACGAGCGTCATGATTTTGATTCAATTCCCAGGACAACAAATGTGCCTGTGTTTAAACACAGTCTCAGAAATATGTTCTCCCGAGCCAAAGTGAAACCCTGTCTGGGC--TGA-CC-CCAATCAGCAGGGCGCGAGGGTGGTGCAGAGCGGGGGGCCTGCATCTGGGGACACtttttttgattacgtatttgattagtggctc-atttccgacgggtcttgttccctgct-ggggaaagtctctagttctgaagtcccatcgcttcctctgtcttcca-------------------cagtcatcactgtctccctgaccacgtttagctctttggtttt-t-cc------------ctgcattctggga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 98725 1340 + 73212453 GGCT--------GGCTCCC------CTGTACCCAGTTGG--AGGGCCCTGCCCTCATCAGGAGACGCACTGGAAATCACACCCCAGGAAAGACAGAGCATGCACCTGTACC--------TGCCCTTTCTTCCAAATCCCC-----CCCAGGGCAGCAAAGCTCCCCGCTCAGCCTAGGAGAGCACAGCTTTCTCCAGAGCCTGAGTGAG-----------TTTCCTCTTCATTCCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGGAGGCAGGC--AACTGCCAGCACAGTAGAAAGGAAAAACA-GCAGTGAG-----AAACAGAATTCTGAGGGTG----CTGTTTTCTTGACAGATGATTTAAACACCTCGGCTAGATTATTTCAGAACCAGAGGAAA----TGCTTTGGCTTCCATTAA----CCCCTGGTGAGGGGCTGGCTCCTGTGAGGCATCTACAC-AATTACCAGTAAGG------------AGCACTTGGCAGCTGCAGAGGGAGGTGTTGCCCAACACTGGCTCCCAATGCCTGCAGGGCTGTGCGCCCCTGGATCAGGGAGAACCCC--GGGACAGGCCGCCAAGCTTCACCTCTGGCCTCGCCCT------GCCTTGTAGCCCAGCCTCGGGGTCTGTGCCCCGTGGGCGCCCCGTGGCCTTTGCATCGTCTCTCACATCACCTGTGATGAGGAAAGGTCCCTACAAGCTGCTGAGAACAG--GGGCCC-----CTGTCTTCTCTCTGGTCCTGCGCACCATCCTCTCCCTTTGTCCAG-ATGCT-CTTG-TAAGCTCAGCAAACGCATGGAGGCTAATGACACT-TTCATCTGCTGCTCTTAATGACTTGTATTGTCAACATTTGACA--GAC-TCCC-CTCACTTTCGACTGGCACGCAGCATGAAATCCTTTCGAGCCCCGGTACTGAGGCTGC----------TCTGACACCGGTTTGAGAGAGGGCAGGCCTGTTACGATGGTGTTTGGCTGCGAAGC-CGC-CTCTGTTCCCAGATGGAGTGGGCTGCACGCAGGAAATGAATAGGGGCTGGAGGCGGAAAATTGGACAAGCCAATTAGACCGAGCCAGGTCTTTTCAGAGGAGCTTCATGATTTTGATTCAATTCCCAGGACAACAAATGTGCCTGTGTTTAAACACAGTCTCAGAAATATG--CTCCCAAGCCAAAGTGAAACCCTGTCTGGGCTGTGA-CC-CCAATCAGCAGGGCTCGAGGGTGGTGCAGCGTGGGGGGCCTGCATCTGGGGACAC---Ttttgattacgtatttgattagtgcctc-atttccgacgggtcttgttccctgct-ggggaaagcctctagttctgaagttccattgctttctctgtcttcca-------------------cagtcatcactgttttcctgagcacgtttagctctttggtttt-t-gc------------ctgcattctggga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 215829 1367 - 81552678 GGCT--------GGCTCCC------CTGTACCCAGTTGG--AGGGCCCTGCCCTCATCAGGAGATGGGCTGGAAATCACACCCCAGGAAAGACAGAGCACACACCTGCACC--------TGTCCTTTCTTCCAAACCCCCCACCGCCCGGGGCAGCAAAGCTCCCTGCTCAGCCCAGGAGAGCACAGCTTTCTCCAGAGCCTGAGGGAG-----------TTTCCTCTTCATTTCAAGTGTGTTTTTGAGCAGCCAGATCAGTCTGGGAGGCAGGC--AACTGCCAGCACAGTAGAAAGGAAAAACG-GCAGTGAG-----AAACAGAATTCTGAGGGCG----CTGTTTTCTTGACAGATGATTTAAACACCTCGGCTAGATTATTTCAGAACTACAGGAAA----TGCTTTGGCTTCCATTAA----CCCCTGGCGAGGGGCTGGCTCCCGTGAGGCTTCTACAC-AATTACCGGTAAGG------------AGCACCTGCCAGCCACAGAGGGCGGTGTCGCCCAACGCTGGCTCCCGACGCCTGCAGGGCTGTACG--CAGGGATCAGGGAGAACCCC--CGGACAGGCCGCCAAGCTTCACCTCTGGCCTCGCCCT------GCCTTGTAGCCCAGCCTCGGGGTCTGCGCCCCATGGGTGCCCCGTGGGCTTTGCATCGTCTCTCACGTCACCTGTGATGAGGAAAGGTCCCTACAAGCTGCTGAGAACAG--GGGCCC-----CTGTCTTCTCTCTGGTCCTGCACACCATCCTCTCCCTTTGTCCAG-ATGCT-CTTGTTAAGCTCAGCAAATCCATGGAGGCTAATGACACT-TTCCTCTGCTGCTCTTAATGACTTGTGTTGTCAACATTTGACACAGAC-TCCC-CTCACTTTCAGCTGGCACGCAGCAGGAAATCCTTTCGAGCCCCGGTACCGAGGCTGC----------TGTGACACCGGTCTGCGAGAGGGCAGGCCTGTTACAATGGTGTTTGGCTGCGAAGC-CGC-CTCTGTTCCCAGATGGAGTGGGCTGCACGCAGGAAACGAATAGGGGCTGGAGG-AGAAAATTGGACAGGCCAATTAGACCGAGCCAGGTCTTTTCAGAGGAGCTTCATGATTTTGATTCAATTCCCAGGACAACAAACGTGCCTGTGTTTAAACACAGTCTCAGAAATAAG--CCCCCAAGCCAAAGTGAAGCCCTGTCTGGGC--TGA-CCGGTAACCAGCAGGGCTCGAGGGTGGTGCAGCGTGGGGGGCCTGCATCTGGGGATACTTCTTTTGATTACGTATTTGATTAGTGCCTC-ATTTCCGACGGGTCTTGCTCCCTGCT-GGGGAAAGCCTCTAGTTCTGAAGTTCCATTGCTTTCTCTGTCTCCCACAGTCAtcactgtctccctcagtcatcactgtctccctgaccatgtttagctcttcggtttt-tccc------------ctgcattctggga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 125088 1334 + 80904711 GGCT--------GGCTCCC------CTGTACCCACTTGG--AGGGCCCTGCCCTCACCAGGAGATGGGCTGGAATTCACACCCCAGGAAAGACAGAGCAGGCACCTGCACC--------TGCCCTTTCTTCCAAATCCCC-----CCTGGAGCAGCAAAGCTCCCCACTCAGCCTAGAAGAGCACAGCTTTCTCCAGAGCCT----GAG-----------TTTCCTCTTCATTTCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGGAGGCAGGC--AATTGCCAGCACAGTAGAAAGGAAAAACG-GGAGTGAG-----AAACAGATTTCCGAGGGCG----CTGTTTACTTGACAGATGATTTAAACACCTCGGCTGGATTATTTCAGAACTAGAGGAAA----TGCTTTGGCTTCCATTAA----CCCCTGGCGAGGGGCTGGCTTCTGCGCGGCTTCTACAC-AATTACCCGTGAGG------------AGCGCTTGCCAGCCACAGAGGGAGGTGTCGCCCAGCGCTGGCTCCCGATGGCTGTGGGGCTGCGCAGCCCTGGATCAGGGAGAACTTC--GCGACAGGCTGCCAAGCTTCACATCTGGCCTCACCCC------ACCTTGTAGCCCAGCCTCGGGGTCTGTGCCCCACGGACGCCCCATGGCCTTTGTATCGTCTCTCACGTCACCTGTGATGAGGAAAGGTCCCTAGGAGCTGCTGAGAACGG--GAGCCC-----CTGTCTGCTCTCTGGTCCTGCAGACCGTCTTCTCCCTTTGTCCAG-ATGCT-CTTG-GAAGCTCAGCAAATCCACGGAGGCCAATGACACT-TTCATGTGCTGCTCTTAAAGACTCGTGTGGTCAACATTTGGCACGCAC-TCCC-CTCACATTCAGCCGGCACGCAGCATGGAATCCTTTCGAGCCCGGGTACTGAGGCTGC----------TCTGCCACCGGCTTGAGAGAGGGCAGGCCTG-TACCACGGTGTTTGGCTGTGAAGC-CGTGCCCTGTG-CCGGGTGGAGTGGGCTGCACACGGGAAATGAATAGGGGCCAGAGGCAGAAAATGGGGCCGGCCAGTTAGACCGAACCAGGTCTTTTCAGAGGAGCTTCATGATTTTTATTCAAATCCCAGGACAACAAATATGCCTGTGTTTAAACACAGCCTCAGAAACACG--CTCCCAAGCCAAAGAGAAACCCTGTCAGGGC--CGAGCC-CTCCTCAGCGGGGTTCGAGGGTGGCGCTGCGTGGGGG--CGACATCTGGGGACACtt-ttccaattacgtatttgatcaacacctc-atatccgacaggccttgtttcctctc-agggaaagcctctagttctgga-ttccgctgctttctccgtcttgca-------------------gagccatcgctgcct-cctgaccacgttcagctctttggcttt-t-cc------------ctgcattcgggga i rheMac3.chr16 M 143 C 0 s macFas5.chr16 130278 1334 + 80997621 GGCT--------GGCTCCC------CTGTACCCACTTGG--AGGGCCCTGCCCTCACCAGGAGATGGGCTGGAATTCACACCCCAGGAAAGACAGAGCAGGCACCTGCACC--------TGCCCTTTCTTCCAAATCCCC-----CCTGGAGCGGCAAAGCTCCCCACTCAGCCTAGAAGAGCACAGCTTTCTCCAGAGCCT----GAG-----------TTTCCTCTTCATTTCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGGAGGCAGGC--AATTGCCAGCACAGTAGAAAGGAAAAACG-GGAGTGAG-----AAACAGATTTCCGAGGGCG----CTGTTTACTTGACAGATGATTTAAACACCTCGGCTAGATTATTTCAGAACTAGAGGAAA----TGCTTTGGCTTCCATTAA----CCCCTGGCGAGGGGCTGGCTTCTGCGCGGCTTCTACAC-AATTACCCGTGAGG------------AGCGCTTGCCAGCCACAGAGGGAGGTGTCGCCCAGCGCTGGCTCCCGATGGCTGTGGGGCTGCGCGGCCCTGGATCAGGGAGAACTTC--GCGACAGGCTGCCAAGCTTCACATCTGGCCTCACCCC------ACCTTGTAGCCCAGCCTCGGGGTCTGTGCCCCACGGACGCCCCATGGCCTTTGTATCGTCTCTCACGTCACCTGTGATGAGGAAAGGTCCCTAGGAGCTGCTGAGAACGG--GAGCCC-----CTGTCTGCTCTCTGGTCCTGCAGACCGTCTTCTCCCTTTGTCCAG-ATGCT-CTTG-GAAGCTCAGCAAATCCACGGAGGCCAAtgacact-ttcatctgctgctcttaaagactcgtgtggtcaacatttggcacgcac-tccc-ctcacattcagccggcacgcagcatggaatcctttcgagcccgggtactgaggctgc----------tctgccaccggcttgagagaggacaggcctg-taccacggtgtttggctgtgaagc-cgtgccctgtg-ccgggtggagtaggctgcacacgggaaatgaataggggccagaggcagaaaatggggccggccagttagaccgaaccaggtcttttcagaggagcttcatgatttttattcaattcccaggacaacaaatatgcctgtgtttaaacacagcctcagaaacacg--ctcccaagccaaagagaaaCCCTGTCGGGGC--CGAGCC-CTCCTCAGCGGGGTTCGAGGGTGGCGCTGCGTGGGGG--CGACATCTGGGGACACtt-ttccaattacgtatttgatcagcacctc-atatccgacaggccttgtttcctctc-agggaaagcctctagttctgga-ttccgctgctttctccgtcttgca-------------------gagccatcgctgcct-cctgaccacgttcagctctttggcttt-t-cc------------ctgcattcgggga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 129031 1334 + 74645514 gGCT--------GGCTCCC------CTGTACCCAGTCGG--AGGGCCCTGCCCTCACCAGGAGATGGGCTGGAATTCACACCCCAGGAAAGACAGAGCACGCACCTGCACC--------TGCCCTTTCTTCCAAATCCCC-----CC-AGAGCAGCAAAGCTCCCCACTCAGCCTAGGAGAGCACAGCTTTCTCCAAAGCCT----GAG-----------TTTCCTCTTCATTTCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGGAGGCAGGC--AATTGCCAGCACAGTAGAAAGGAAAAGCA-GGAGTGAG-----AAACAGAATTCCGAGGGCG----CTGTTTTCTTGACAGATGATTTAAACACCTCGGCTAGATTATTTCAGAACTAGAGGAAA----TGCTTCGGCTTCCATTAA----CCCCTGGCGAGGGGCTGGCTTCTGTGCGGCTTCTACAC-AATTACCCGTGAGG------------AGCGCTTGCCAGCCACAGAGGGAGGTGTCGCCCAGCGCTGGCTCCCGATGGCTGCAGGGCTGCGCGGCCCTGAATCAGGCAGAACTTC--GTGACCGGCTGCCAAGCTTCACGTCTGGCCTCACCCC------GCCTTGTAGCCCAGCCTCGGGGTCTGTGCCCCACGGACGCCCCATGGCCTTTGTATCGTCTCTCACGTCACCTGTGATGAGGAAAGGTCCCTAGGAGCTGCTGAGAACGG--GGGCCC-----CTGTCTGCTCTCTGGTCCTGCACACCATCTTCTCCCTTTGTCCAG-ATGCT-CTTG-GAAGCTCAGCTAATCCACGGAGGCCAATGACACT-TTCATCTGCTGCTCTTAAAGACTCGTGTGGTCAACATTTGACACACAC-TCCC-CTCACGTTCAGCCGGCACGCAGCATGGAATCCTTTCGAGCCCCGGTACTGAGGCTGC----------TCTGCCACCGGCTTGAGAGAGGGCAGGTCTG-TACCACGGTGTTTGGCTGTGAAGC-CGTGCCCTGTGCCCGGATGGAGTGGGCTGCACACGGGAAATGAATAGGGGCTGGAGGCAGAAAATGGGGCCGGCCAGTTAGACCGAGCCAGGTCTTTTCAGAGGAGCTTCATGATTTTGATTCAATTCCCAGGACAACAAACATGCTTGTGTTTAAACACAGCCTCAGAAACACG--CTCCCAAGCcaaagagaaaccctgtctgGGC--CGAGCC-CTCCTCAGCGGGGTTCGAGGGTGGTGCGGTGCGGGGG--CGACATCTGGGGACACTT-TTCCAGTTACGTATTTGATCAGCACCTC-ATTTCCGACAGGCCTTGGTTCCTCTC-AGGGAAAGCCTCTAGCTCTGGA-TTCCGCTGCTTTCTCCGTCTTCCA-------------------GAGCCGTTACTGCCT-CCTGACCACGTTCAGCTCTTTGGCTTT-T-CC------------CTGCATTCTGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 117551 1333 + 75148670 GGCT--------GGCTCCC------CTGTACCCAGTCGG--AGGGCCCTGCCCTCACCAGGAGATGGGCTGGAATTCACACCCCAGG--AGACAGAGCACGCACCTGCACC--------TGCCCTTTCTTCCAAATCCCC-----CC-GGAGCAGCAAAGCTCCCCACTCAGCCCAGGAGAGCACGGCTTTCTCCAGAGCCT----GAG-----------TTTCCTCTTCATTTCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGGAGGCAGGC--AATTGCCAGCACAGTAGAAAGGAAAAACG-GCAGTGAG-----AAACAGATTTCCGAGGGCG----CTGTTTTCTTGACAGATGATTTAAACACCTCGGCTAGATTATTTCAGAACTAGAGGAAA----TGCTTTGGCTTCCATTAA----CCCCTGGCGAGGGGCTGGCTTCTGCGCGGCTTCTACAC-AATTACCCGTGAGG------------AGCGCTTGCCAGCCACAGAGGGAGGTGTCGCCCAGCGCTGGCTCCCGATGGCTGCGGGGCTGCGTGCCCCTGGATCAGGGAGAACTTC--ACAACAGGCTGCCAAGCTTCACGTCTGGCCTCACCCT------GCCTTGTAGCCCAGCCTTGGGGTCTGTGCCCCACGGACACCCCATGGCCTTTGTATCGTCTCTCACGTCACCTGTGATGAGGAAAGGTCCCTAAGAGCTGCTGAGAACGG--GGGCCC-----CTGTCTGCTCTCTGGTCCTGCACACCATCTTCTCCCTTTGTCCAG-ATGCT-CTTG-GAAGCTCAGCAAATCCACGGAGGCCAAtgacact-ttcatctgctgcccttaaagacttgtgtggtcaacatttgacacacac-tccc-ctcacgttcagccggcacgcagcatggaaacctttcgagcccgggtactgaggctgc----------tgtgccaccggcttgagagagggcaggcctg-tcccatggtgttcggctgtgaagc-cgtgccctgtgcccggatggagcgggctgcacgcgggaaatgaataggggctggaggcagaaaattgggccggccaattagaccgagccaggtcttttcagaggagcttcatgattttgattcaattcccaggacaacaaatatgcctgtgtttcaacacagcctcagaaacacg--ctcccaagccaaggagaaaccctgtctggGC--CGAGCC-CTCCTCAGCAGGGTTCGAGGGTGGTGCAGTGCGGGGG--CGACATCTGGGGACACtt-ttccaattacgtattcgatcagcacctc-atttccgacgggccttgtttcctctc-agggaaagcctctagttctgga-ttccgctgctttctccgtcttcca-------------------gagccatcgctgcct-cctgaccacgttcagctctttggcttt-t-cc-----------tctgcattctggga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 931940 1322 - 1291538 AGCG--------GGCTCCC------CTGTACCCATTTGG--A-GGCCCCACCCTCACCAGGAGACAGGCTGGAAATCACATCCCAATAAAGACAAAGCACACACCTGC--------------CCTTTCTTCCAAATTCCC-----AT--GGGCAGCAAAGCTCCCCGCTCAGCCCAGGAAAGTACAGCTTTCTCCAGAGCCTGGGTGAG-----------TTTCTTCTTCATTTCAAGTGGGTTTTTGAGCAACCAGGTCAGTCTGGGTGGCAGGC--AATTGTCAGCACAGTAGAAAAGAAAAACT-GCAGTGAG-----AAACAGTATTCTGAGGGTGCTATCTGTTTTCTTGACAGACAATTTAAACACCTCACCTAGATTACTTCAGAACTAGAGGAAA----CACTTTGGCTTCCATTAA----CCCCTGGCAAGGGGCTCCCCCCTGCAAGGCGTCTACAC-AATTACCAGTGAGG------------ACTGCTTGTCAGCTGCAGAGGGAGGCATCACCCAATGTGGGCTCCTAATGGCTAAAGGGCTGTGCG-CCCTGGATCAGGAAGACCCCCCTGGGACAGGCTGCCTGGCTTCACCTCTGGCCTTGTCTG------GATTAGTAGCCCAGCCTCAGGGTCTGTGCCCCATGGCCA-CCCATGGCCCTGGCACTATCTCTCACATTACCTGTGATGAAGAAAGGTCCCGGCAAGCTGCTGAGAACAG--GGGCTC-----CTGCCTTTTCTCTGGCCCTGCACACCATCCTCTCAATTTGTCCAG-ATGCT-ATTT-CGAGTTCAGCAAATCCAAGGAGGCTAACG--ACC-TTCACCTGGTGTTCTTAATGA--TGTGTTATCGACACTTGGCACACGC-CAAG-TGTGCCTTCA-CTGGCCTGCAGCATGCAATCCTTTCGAGCCCCAGAATTTAGCCTGC----------CGTGACACT-GTCTGAGACAGGGCAGGCCTGCTATAGCAGTGTTTGGCTGAGAAGC-CTTGCTCTGTTCCCAGACTGAGT-GGCTGCATGCAGGAAATGAATTGGGGCTGGAAGCAGAAAATTGGACAGGCCAATTAGACTGAGCCAGGTCTTTTCAGAGGAGCTTCATGATTTTGATTCGATTCCCAGGAAAACAAATATGCCTGTGTTTAAACACAGTCTCAGAAACATG--CTCCCAAGCCAAAGCGAAGCCCTTTCTGGGC--TGACCC-CTCATCAGCAGGGCTCCAGGCTGGTGCAGCACAGGG----------TGGGGGTACttttttcaattacgtatctgattaatgtttcaatttctgacgggtcctgttccctccc-agggaaaacctctaattcttaagctccgttacct-ctctgccttcca---------------------gtcatcaccgtctccctgaccacgtttagctctttggttttct-cc------------ctgcattctggca i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75865170 1274 + 122082543 GTCTCTACTCAGGGCTCCTTACACACTATGCCTGCTCTGCAAAGCCCCCAACCTCACTAGGACA----CTGGGAACTA-----------AGGCAGAG-ACGCCCCCCCCCCCCCCAGGACGCTCTGCCCTCTGGGCCCTG--------AGTGCAGGAAG--TTTGAGCTCAGCACCCTGGATCCCTGAATTC-CCAGGGTCTGAGCAAT-----------CCTCCTCTTCAATTCAAGTGGG-CTCTGAGCAACCAGGGCAGCCTGGGAGACTAGC--AGCTGCCAGCACAGCGGAACTGGAAAGCT-GCAGTGAGGGGGAAAAAAGCACTGTGAGGGTG----CTGTCT-----------GATTCAAACCCCGTGGCTGGATTATTTCAGAACCAGAGAGAACGCTCGCTCCGGCTTCCATGAAGCAGCCTTTGGTGAGGGGTT-GTTTCTATAACAATTATCCACTCATAATAAACAAGG------------GGAGCTTGCCAATGTCATGAGGCAGTA----------------------GCCTAAAAGGCTATGC--CCCTACATCAGGGGTAGGCTT------------GCTGGACCTGAC-TCTAGCCCTATCTCTCTGTAGCCTTGTTGCCCACCCTCAGGAGTATCCCTCCA-----GCCCTGT------------ATCTCCCATGCTGTCTGGGATGTGGGAAGGTCCTTGTAAGCCCCTCCCCTCTGCAAGGACC-----ATCTCCTCCCTCTGGTCCAGAGGCCTGTCTCCACGCTCCTT--GG-CTGTTCCCTA-CCAGCTCAGCAAACCCACAGGG----ATAAGACT-CTCAGCGCCTCCT----ATACCATGGATTGGCAACACTTCGAAAATGCTTCCC-CTTACTCTGAAACCATAAGCATCGTTAAATCTCTCTGAAT----GCACTCTGACCTCCCCTCCCGTTTCTGCCACAGGTCTCTGGGA------GCATGCTCAGGTGGTGTTTGGCGGGGAAGC-CATGCTCTGGCCCCAGATGGAGTGGGCTGCACGCAGGAAATGAATAGAGGCTGTGAGCAGAAAATTGCACAGGCCAATTATAGCAAGCCAGGTCTTCTCGGAGAAGCTTCTCAATCTTGATTCAATTCCCAGAACAACAAATATGCCAGTGTTTAAACACAGTCCC-----------------AGCCGAAGCGACACT--------AC--TGGCCC-CTGGGTGGCTGAGCTCTCAGGTGGGGGAGGATTGGGGTCTTAAATACTGGGACGTGCTTCTCAATGGTGCGTGCAGTGAGCGCTTC-ATTTTCAATCTGTTTTGTTTCTTTT---GGGAAAACCTCTAATTCTGAGGCCC---------CTCTATCTTCCT-------------------TACTCATTGTTCCATCGTTCAACTAGGTTATTTCCTTTTTTTT-T-TTAAATCCCATTTTTTTTTTCTTAGGA i mm10.chr11 C 0 C 0 s canFam3.chr9 15693622 1256 - 61074082 GGCC--------AGCTCCC------C---ACCCTGGGGC--CAGGCCTGCATCTCACCAGGAGGTAGGTGGGAAATTAAGCCCCAGCAAAGATGGAGCACACACTTGA-----------TGACCCTTTCTGCAACCCCAC-----TGCAGG------CAGCTCCTCCCTCACCCCAGGAGCAGGTGGC---CCCAAGAGCAGGAGGGAGCCCTTGTGAATTTTCTTTTTCATTTCAAGTGGG-TTTTGAGTAACCAGGTCAATCTGGAAGGCAAGCCAATTTGCCAGCATAGTAGAACGGAAAAAAATGCAGTGAG-----CAA-AATCTTCTGAGAGTG----CTGTTTTCTTGACAGATAATTTAAACACCTTGGCTAGATTATTTCTGAACCAAAGGAAA----TGCTTTGGCTTCCATTAA----CCTCTGGCGAGGGGCTTGCTCCAGTGAAGCTTCTGCAC-AATTACTGGTGAGGTAATTCTGCACAATTACTTGCCAGCCTCAGAGGGAGGTGGCTCCCAACAATGGCTCTCCACGTCTGC-GGGCTGTGGG------------------------GCTGTGTGCCCCCAAGGT---------GTCTAGCCCT------GC-------------------------------------------------------ATCTCCCTCATTACCTGCACTGTGCAAAGGTCCCTGCAAGCCACTGAAAACAG--GGACCCCATCTCCCCTCTCTCTCTGGTCCCACAGGCCATCTTCTCCCCGTATTCAGAATGGT-CTCC-GGAATTCAACAAATCCATGCAGGCTAATGATGCTCTTTCACAACTGTTCTTAATTACTTGCTTTGTCAACACTGCATATAGGC-CCCCTCGCACTCTTCATTTGCATGCAGCATGAAATCCCTTTGAATCCAAAATATTTAACTAT-CTTCTCGGGTCCAAGACAGATTT--GAGAGGACAAGCGTGTTCCAGTGGTGTTTGGCTGCAGAGCACGC-CTCTGTCCCCAGATGGAGTGGGCCATACACGGGAAATGAATAGA-GCTGGAATCAGAAAATTGGACAGGCCAATTAGACCCAGCCAGGTCTTTTCAGAGGAGCTTTATGATTTTGATTCAATTCCCAGAACAACAAACATGCCTATGTTTAAACACAGTTTCAGAAACATA--TTCCAAAGCCAATATGACAGCATTTCTGGGC--TGACCA-CTCCCTGGCAGGGCTCGTGGGCCTTGca--------------------ggaatgctttcctcagctgtggatttgattattgcttc-atttccaattggtcttgtcccttcttgggggaaaacctagaattctgaggttccatggcc--atccatcttcca-------------------gattcactgtagtgtctcttactgttttcagctcttttg-----t-cc------------ctgccttctggaa i canFam3.chr9 C 0 I 123 a score=684962.000000 s hg38.chr17_GL383563v3_alt 236320 209 + 375691 gatccta-----------------------------------------------------------------cagg--tctctccaaatcactgattcaagcttctTATTTTTTGCCTGATTTTAGCGACCTCCTCTCATCTTTTGGGTGTATGCCCgtgaaagctagcaaatctacaaaagtgtatttcatacag-------acatttcaaagaatcatattccagtaaatacctgtgagctcatcaagaaataaaatggtgctggatgtgagaagctcccg s panTro4.chr17 212262 209 + 82630442 gatccta-----------------------------------------------------------------cagg--tctctccaaatcactgattcaagcttctTATTTTTTGCCTGATTTTAGCGACCTCCTCTCATCTTTTGGGTGTATGCCCgtgaaagctagcaaacctacaaaagtgtatttcatacag-------acatttcaaagaatcatattcgagtaaatacctgtgagctcatcaagaaataaactggtgccagatgtgagaagctcccg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 100065 211 + 73212453 gatccta-----------------------------------------------------------------caggtctctctccatatcactgattcaagcttctTATTTTTTGCCCAATTTTGACGACCTCCTCTCATCTTTTGGGTGTATGCCCAtgaaagctagcaaacctacaaaagtgtatttcatacag-------acatttcaaagaatcatatttgagtaaacacctgtgagctcctcaagaaataaaatggtgctgaatctgagaagttcccg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 217196 211 - 81552678 gatccta-----------------------------------------------------------------caggtctctctccatatcactgattcaagcttctTATTTTTTGCCTGATTTTAGCGACCTCCTCTCATCTTTTGGGTGTATGCTCAtgaaagctagcaaacctacaaaagtatatttcatacag-------acatttcaaagaatcatattcaagtaaatacctgtgagctcatcaagaaataaaatggtgctggatccgagacgctccca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 126422 211 + 80904711 gatctta-----------------------------------------------------------------caggtctctctccgtatcactggttcaagcttctTATTTTTTGCCTGATTTTAGTTACCTCCTCTCATCTTTTGGGTGTATGCCCGTGAAAGCCAGCAAACCTACAAAGGTGTATTTCATACAG-------ACATTTCAAAGAATCATATTCGAGTAAATACCTGTGAGTTTATCAGGAAATAAAATGGTGCCGGATCTGAGCAGCTCCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 131612 211 + 80997621 gatctta-----------------------------------------------------------------caggtctctctccgtatcactggttcaagcttctTATTTTTTGCCTGATTTTAGTGACCTCCTCTCATCTTTTGGGTGTATGCCCGTGAAAGCCAGCAAACCTACAAAGGTGTATTTCATACAG-------ACATTTCAAAGAATCATATTCGAGTAAATACCTGTGAGTTTATCAGGAAATAAAATGGTGCCGGATCTGAGCAGCTCCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 130365 211 + 74645514 GATCTTA-----------------------------------------------------------------CAGGTCTCTCTCCGTATCACTGGTTCAAGCTTCTTATTTTTTGCCTGATTTTAGTGACCTCCTCTCATCTTTTGGGTGTATGCCCGTGAAAGCCAGCAAACCTACAAAAGTGTATTTCATACAG-------ACATTTCAAAGAATCATATTCGAGTAAATACCTGTGAGTTTATCAGGAAATAAAATGGTGCCGGATCTGAGCAGCTCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 118884 210 + 75148670 gatctta-----------------------------------------------------------------caggtctctctccatatcactggttcaagcttctTATTTGTTGCCTGATTTTAGTGACCTCCTCTCATCTTTTGGGTGTATGCCCGTCAAAGCCAGCAAACCTACAAAAGTGTATTTCACACAG--------CATTTCAAAGAATCGTATTCGAGTAAATACCTGTGAGTTTATCAGGAAATAAAATGGTGCCGGATCTGAGCAGCTCCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 933262 210 - 1291538 gatctca-----------------------------------------------------------------caggtctctctccatatcactgattcaaGCTGCTTATTCTTTGCCTGATTTTCATGCTCTCCTCTCACCTTTTGGGTGCATGCCTGTGAAAGCTAGCAAACCTATGAAAGTGTAGTTCATGCAG-------acatttcgaagaatcatatttgattaaatacctgtgagctcatca-gaaacaaaatggtaccagatccgagaagcccccg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75866444 188 + 122082543 GATCTTA-----------------------------------------------------------------CAGA--CTTCTCTGGGTCACTAATTCAAGCTTCCTATT--TTGTCTAACTTGGGGAATTTCGGGTTGTC-TTTAGATGTGTACTGGTGACATCTAACATGCACGCAGA-GTTTATTCTGTACAC----AGCACAATTC--AGAACCGTCTTCATATAAA----------CTCACCAAG--------TATTACTGAATTGAGGAAGCCCCTG i mm10.chr11 C 0 I 2657 s canFam3.chr9 15695001 275 - 61074082 gatcccaggaacccagaatcatgacctgagccaaaggcagatgcccaaccactgagccacccagatatccctaaagtttttgttcctatcactgattcaagctttttgG---GGGTCTGACTTTTGCGATCCCTTGTTATATTTAAGAGGTGTGCCtgtgaaatccagcatccatactaaagta-----cataaagacatagtacacttcaaagaaacatactcaactcagcacctgtgaactcatggagaaattaaatattactgaatctgagaggcctctt i canFam3.chr9 I 123 C 0 a score=258360.000000 s hg38.chr17_GL383563v3_alt 236529 83 + 375691 taaacccaccctccc-tctcagaggtaaccaccatctggaattttgtattaagcaatctcttgcttttctagttta-------------aaaaaacc s panTro4.chr17 212471 83 + 82630442 taaacccaccctccc-tctcagaggtaaccaccatctggaattttgtattaagcaatctcttgcttttctagttta-------------aaaaaacc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 100276 83 + 73212453 taaatccaccctccc-tctcagaggtaaccaacatctagaattttgtattaagcaatctcttgcttttctagttta-------------aaaaaacc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 217407 83 - 81552678 tgaacccaccctccc-tctcagaggtaaccaccatctggaattttgtattaagcaatctcttgcttttctagttta-------------aaaaaacc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 126633 83 + 80904711 T-AACCCAccctcccttctcagtggtaactaccaactggaattttgtattaagcaagctcttgcttttctagttta-------------aaaaaacc i rheMac3.chr16 C 0 I 3928 s macFas5.chr16 131823 83 + 80997621 T-AACCCAccctcccttctcagtggtaaccaccaactggaattttgtattaagcaagctcttgcttttctagttta-------------aaaaaacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 130576 83 + 74645514 T-AACCCACCCTCCCTTCTCAGTGGTAACCACCATCTGGAATTTTGTATTAAGCaatctcttgcttttctagttta-------------aaaaaacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 119094 83 + 75148670 T-CACCCAccctcccttctcagtggtaaccaccatctggaattttgtattaagcaatctcttgcttttctagttta-------------aaaaaacc i chlSab2.chr16 C 0 I 3860 s calJac3.chrUn_GL286409 933472 83 - 1291538 taaacccaccctcccttctcagaggtaaccaccatctggcattttgtattaagcaatctcttgcttttttagttta-------------ataaaac- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15695276 93 - 61074082 taagccctctttgtc-ttccagaggtaagcactg---ggaatcttgcattaagcagtccctcacttttctattcaacaacaacaataacaaaaaaca i canFam3.chr9 C 0 C 0 e mm10.chr11 75866632 2657 + 122082543 I a score=23462.000000 s hg38.chr17_GL383563v3_alt 236612 22 + 375691 -ttgtatgtatgtat--gcatttct s panTro4.chr17 212554 24 + 82630442 -ttgtatgtatgtatatgcatttct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 100359 22 + 73212453 -tcgtatgtatgtac--gcatttct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 217490 22 - 81552678 -tcgtatgtatgtat--gcatttct i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 131906 18 + 80997621 -----acatatgtat--gctttttt i macFas5.chr16 C 0 I 3664 s papAnu2.chr16 130659 18 + 74645514 -----acatatgtat--gctttttt i papAnu2.chr16 C 0 I 3624 s calJac3.chrUn_GL286409 933555 19 - 1291538 ----tgcatatgtat--gcatttct i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15695369 23 - 61074082 ttttgttttttgtgt--gcatttct i canFam3.chr9 C 0 C 0 e mm10.chr11 75866632 2657 + 122082543 I e chlSab2.chr16 119177 3860 + 75148670 I e rheMac3.chr16 126716 3928 + 80904711 I a score=9555.000000 s hg38.chr17_GL383563v3_alt 236634 7 + 375691 aaataaA s panTro4.chr17 212578 7 + 82630442 aaataaA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 100381 7 + 73212453 aaataaA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 217512 7 - 81552678 aaataaA i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 933574 7 - 1291538 aaataaA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15695392 7 - 61074082 aaataaa i canFam3.chr9 C 0 I 1848 e mm10.chr11 75866632 2657 + 122082543 I e chlSab2.chr16 119177 3860 + 75148670 I e papAnu2.chr16 130677 3624 + 74645514 I e rheMac3.chr16 126716 3928 + 80904711 I e macFas5.chr16 131924 3664 + 80997621 I a score=196103.000000 s hg38.chr17_GL383563v3_alt 236641 317 + 375691 TAcagttgacccatgaaccacatgggctggaactgcacaggcccactcctagctggattttcctctccctccatcacccttgtgacaacgaaagcaacccctcctcttcctcctcctcatctccccgtcacccctgtgacaataaaaccaactccccttcctcc------tcagcctacccaacacgaagacgatgaggatgaagaccttcacgatgacccacttccccttcatgaagagtaaatatattctctcttcctcatgattttcttaataacattttcttttctctagcttattttattgtaagaatatagtatata s panTro4.chr17 212585 317 + 82630442 TAcagtggacccatgaaccacatgggctggaactgcacaggcccactcctagctggattttcctctccctccgtcacccctgtgacaacgaaagcaacccctcgtcttcgtcctc---atctccccgtcacccctgtgacaataaaaccaactcccgttcctccacctcctcagcctacccaacacgaagactatgaggatga---ccttcatgacgacccacttccccttcatgaagagtaaatatattctctcttcctcatgattttcttaataacattttcttttctctatcttattttattgtaagaatatagtatata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 100388 314 + 73212453 TAcagttggcccatgaactacgtgggctggaactgcacaggcccactcctagctggatcttcctctccctccgtcaccc--gtgacaacgaaagcaacccctcctcttcctc------atctccccgtcacccctgtgac-ataaaagcaactcctcttcctcctcctcctcagccaacccaacacgacgacgacgagggtgaagaacttcacgatgacccacttccccttaatgaagagtaaatatactctctcttccttatgattttcttaataacatttgcttttctctagcttattttattgtaagaatatagtatata i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 217519 266 - 81552678 TAcagttgacccatgaaccacatgggctggaactgcacaggcccactcctagctggattttcctctccctccatcacccctgtgacaacgaaagcaacccctccccctcctc---------------------------------------------------------ctcagcctacccaacacgaagacgacgaggatgaaaaccttcacaatgacccacttccccttaatgaagagtaaatatattccctcctccttatgattttcttaacaacattttctttcctctagcttattttattgtaaggatatagtatcta i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 933581 269 - 1291538 TAcagttgactcgtgaaccacatgggcctgaactgcacaggctcgttcctagccagat-ttcctctccctctgtcacccctaagacaagaaaaccaagccctcctcttcctc------------------------------------------------ttcctcctcctcagcctattcaattcgaagatgacaaggatggagaccttcacgatgacctgcttccccttaat---tagtaaatacatt--ctcttccttatgattttcttaataacattttccttcctctagcttattctgttgtaagaatatagtatata i calJac3.chrUn_GL286409 C 0 I 4154 e mm10.chr11 75866632 2657 + 122082543 I e canFam3.chr9 15695399 1848 - 61074082 I e chlSab2.chr16 119177 3860 + 75148670 I e papAnu2.chr16 130677 3624 + 74645514 I e rheMac3.chr16 126716 3928 + 80904711 I e macFas5.chr16 131924 3664 + 80997621 I a score=297746.000000 s hg38.chr17_GL383563v3_alt 236958 621 + 375691 atgcatataatatacaaaatatgtgttaactgaatgttttttattggtaagtcttccagtcaacagtagactattagttaagttttggagagttaat-agttatattaagattttAAGTATGTTTTTGGGtttttttttttttttttttttttttgaggcaggatctcacgctgttgcccaggctgaagtactgtggcaccatctcggctcactgcagcctccgcctcccaggttcaagcaatcctccgacctcagcctcccaagtagctggggccactagacatgcccccactacaccaggctaatttttaaaaactttttgtagtgacaggtttcgccatgttacccagactggtctcaaactctggggctcaagcaatcctcccgcctcagcctcctgagtagctgggactataggttcatgctaccaggcctggATGATtttttattttttattta---ttattatttttttgagacggagtctcgctccgtcacccaggctggagtgcagtgccgcgatctcggctcaccgcaagctctgcctccc--gggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgc--ctggctaa s panTro4.chr17 212902 610 + 82630442 atgcatataatatacaaaatatgtgttaactgaatgttttttattggtaagtcttccagtcaacagtagacgattagttaagttttggagagttaat-agttatattaagattttAAGTATGtttttgggttgttttttttt-------------gaggcagggtctcacgctgttgcccaggatgaagtaccgtggtaccatctcggctcactgcagcctccgcctcccaggttcaagcaatcctccgacctcagcctcccaagtagctggggccactagacatgcccccactacaccaggctaatttttaaaaactttttgtagtgacaggtttcgccatgttacccagactggtctcaaactctggggctcaagcaatcctcccgcctcagcctcctgagtagctgggactataggttcatgctaccaggtccagATGATtttttattttttattta---ttattatttttttgagacggagtctcactctgtcgcccaggctggagtgcagtgccgcgatctcggctcactgcaagctccgcctccc--gggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacacgtctggctaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 100702 603 + 73212453 atgcatataatatacaaaatatgtgttaactgaatgttttttattgataactcttccagtcaacagtaggctattagttaagttttggagagttaat-agttatattaagattttAAGTATGtttttgggtttttt-------------------gaggcagggtctcacgctgttgcccaggctgaagtaccgtggcaccatcttggctcactgcaacctccgcctcccaggttcaagccatcctccgacctcagcctcccaagtagctgggaccactagacatg-cgccactacaccaggctaatttttaaaaactttttgtagtgacaggtttcgccatgttacccagactggtctcaaactccgggactcaagcaatcctcctgcctcagcctcctgagtagctgagactacaggttcatgctaccaggcccggATGATTTTttattttttatttattgttattatttttttgagatggagtctcgctctgtcccccaggctggagggcagtggcgccatctcagctcactgcaagctccgcctccc--gggttcacgccattctcctgcctcagcctcccgagtagctgggaatacaggcgcccgcca-cacgt--ccagctaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 217785 612 - 81552678 atgcatataatgtacaaaatagatgttaactgaatgttttttattggtaagtcttccagtcaacagtaggc--ttagttaagttttggagagttaataagttatattaagattttAAGTATGtttttgggttttttttttttttttttt------gaggcagggtctcacgctgttgcccaggctgaagtacaatggcaccatcttggctcactgcaacctccgcctcccaggttcaagcaatcctcctacctcagcctcccaagtagctgggaccactaggcacg-ccccactgtaccaggctaatttttcaaaattttttgtagtgacaggtttcgccatgtta-ccagactggtctcaaactcctgggctcaagcaatcgtcctgcctcagactcctgagtagctgggactacaggTTCATGCTGCCAGGCCCGGATGAttttttatttattattg----ttattatttttttgagacggagtctcgctctgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaggctccgcctcccgggggttcacgccattctcctgcctcagcctcccgagtagctggaaccacaggcacccacca-cacgc--ctggctaa i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75866632 2657 + 122082543 I e canFam3.chr9 15695399 1848 - 61074082 I e calJac3.chrUn_GL286409 933850 4154 - 1291538 I e chlSab2.chr16 119177 3860 + 75148670 I e papAnu2.chr16 130677 3624 + 74645514 I e rheMac3.chr16 126716 3928 + 80904711 I e macFas5.chr16 131924 3664 + 80997621 I a score=28188.000000 s hg38.chr17_GL383563v3_alt 237579 57 + 375691 tt-------ttttgtatttttagtagagacggggtttcaccgtgttagccaggatgg------------------------------tctcgat- s panTro4.chr17 213512 57 + 82630442 tt-------ttttgtatttttagtagagacggggtttcaccgtgttcgccaggatgg------------------------------tcttgat- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 101305 64 + 73212453 ttttttgtattttgtatttttagtagatacggggtttcaccgtgttagccaggatgg------------------------------tcttcat- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 218397 57 - 81552678 tt-------ttttgtatttttagtagagacggggtttcaccatgttagccaggatgg------------------------------tctcgat- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 135588 87 + 80997621 tt-------ttcttttctctttttagagacagggtcttgctctgtt-gccaggctggagtgaagtggtgtgatcatagctcattacagcttgaaa i macFas5.chr16 I 3664 C 0 e mm10.chr11 75866632 2657 + 122082543 I e canFam3.chr9 15695399 1848 - 61074082 I e calJac3.chrUn_GL286409 933850 4154 - 1291538 I e chlSab2.chr16 119177 3860 + 75148670 I e papAnu2.chr16 130677 3624 + 74645514 I e rheMac3.chr16 126716 3928 + 80904711 I a score=71267.000000 s hg38.chr17_GL383563v3_alt 237636 79 + 375691 ctcctgacctc--ataatccgcccgccttggcttcctaaagtgctgggatcacaggcgtgagccaccgtgcctggccGAtt s panTro4.chr17 213569 79 + 82630442 ctcctgacctc--gtaatccgcccgccttggcttcctaaagtgctgggattacaggcgtgacccaccgcgcccggccGAtt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 101369 79 + 73212453 ctcctgacctc--gtaatccacccgcctcggcctcctaaagtgctgggattacaggcgtgagccaccatgcccggccGAtt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 218454 79 - 81552678 ctcctgacctc--gtgatccacccgccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcccggccGAtt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 135675 79 + 80997621 ctcctgggctcgagcaatcctcctgcctcagcctcctgagtagctggga--acaggttcacgccaccaggcccggatgacg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 134301 79 + 74645514 ctcctgggctcgagcaatcctcctgcctcagcctcctgagtagctggga--acaggTTCACGCCACCAGGCCCGGATGATG i papAnu2.chr16 I 3624 C 0 e mm10.chr11 75866632 2657 + 122082543 I e canFam3.chr9 15695399 1848 - 61074082 I e calJac3.chrUn_GL286409 933850 4154 - 1291538 I e chlSab2.chr16 119177 3860 + 75148670 I e rheMac3.chr16 126716 3928 + 80904711 I a score=22365.000000 s hg38.chr17_GL383563v3_alt 237715 13 + 375691 ttttattttttag s panTro4.chr17 213648 13 + 82630442 ttttattttttag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 101448 13 + 73212453 ttttattttttag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 218533 13 - 81552678 ttttattttttag i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 135754 13 + 80997621 ttttatttttcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 134380 13 + 74645514 TTTTAGTTTTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123037 13 + 75148670 ttttatttttcag i chlSab2.chr16 I 3860 C 0 e mm10.chr11 75866632 2657 + 122082543 I e canFam3.chr9 15695399 1848 - 61074082 I e calJac3.chrUn_GL286409 933850 4154 - 1291538 I e rheMac3.chr16 126716 3928 + 80904711 I a score=503510.000000 s hg38.chr17_GL383563v3_alt 237728 236 + 375691 agacgagggatcgccatgttgcccaggctggtcttgaacttctgtggcctcaagcagtcctcttgcctcagcctcccagagtgctgggtgtgagccaccgtgcctgaccTACttattctttttcctgttcagcatctagtgtatgatacgatttgcttatttgtttatgtttcatcgtctgttcccca-ccctcagccctggcccccttgctggaacgcaagctccaggcaaagcta s panTro4.chr17 213661 236 + 82630442 agacgaggtatcgccatgttgcccaggctggtcttgaacttctgtggcctcaagcagtcctcttgcctcagcctctcagagtgctgggtgtgagccaccgtgcctgaccTACttattctttttcctgttcagcatctagtgtatgatacgatttgcttatttgtttatgtttcatcgtctgttccccg-cccccagccctggcccccttgctggaacgcaagctccaggcagagcta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 101461 234 + 73212453 agacgaggtatcgccatgttgcccaggctggtcttgaacttc--tggcctcacacagtcctcttgcctcagcctcccagagtgctgggtgtgagccactgtgcctgaccTACttattctttttcctattcagcatctaatgtatgatacgatttgcttatttctttatgcttcattgtctgttcccca-tccccagccctggcccccttgctagaatgcaagcttgaggcagagcta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 218546 229 - 81552678 agatgaggtattgccatgttgcccaggctggtcttgaacttc--tggcctcaagcagtcctcttgcctcagccccccagagtgctgggtgtgagccactgtgcctgaccTACttattcttcttcctattcagcatctaatgtatgatatgatttgcgta----tttatgtttcattgtctgttccccaccccccagccctggcccc--tgctagaacgcaagcttgaggcagagcta i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 130644 227 + 80904711 agacaaggaatcaccatgttgcccaggctggtcgtgaacttc--tggcctcaagcagtcctcttgcctcagcctcccagagtgctgggtgtgagccactgtgcctgacctactcattctttttcctattcag-acctaacgtgtgatatgatctgctta----tttaggtttcattgtctgtgcccca-cccccaggcccagtccc--cactagaacgcaagctcaagtcagagcta i rheMac3.chr16 I 3928 C 0 s macFas5.chr16 135767 227 + 80997621 agacaaggtatcaccatgttgcccaggctggtcttgaacctc--tggcctcaagcagtcctcttgcctcagcctcccagagtgctgggtgtgagccactgtgcctgacctactcattctttttcctattcag-acctaacgtgtgatatgatctgctta----tttaggtttcattgtctgtgcccca-cccccaggcccagtccc--cactagaacgcaagctcaagtcagagcta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 134393 227 + 74645514 AGACaaggtatcaccatgttgcccaggctggtcttgaacttc--tggcctcaagcagtcctcttgcctcagcctcccagagtgctgggtgtgagccactgtgcctgacctactCATTCTTTTTCCTATTCAG-ACCTAATGTGTGATATGATCTGCTTA----TTTAGGTTTCATTGTCTGTGCCCCA-CCCCCAGGCCCAGTCCC--CACTAGAACACAAGCTCAAGTCAGAGCTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123050 227 + 75148670 agacaaggtatcaccatgttgcccaggctggtcttgaacttc--tggcctcaagcactcctcttgcctcagcctcctagagtgctgcgtgtgagccactgtgcctgacctactcattctttttcctattcag-acctaatgtgtgatatgatctgctta----tttaggtttcattgtctgttcccca-cccccaggcccagtccc--cactagaacgcaagctcaaggcacagcta i chlSab2.chr16 C 0 C 0 e mm10.chr11 75866632 2657 + 122082543 I e canFam3.chr9 15695399 1848 - 61074082 I e calJac3.chrUn_GL286409 933850 4154 - 1291538 I a score=10236.000000 s hg38.chr17_GL383563v3_alt 237964 6 + 375691 tttcac- s panTro4.chr17 213897 6 + 82630442 tttcac- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 101695 6 + 73212453 tttcac- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 218775 6 - 81552678 cttcac- i nomLeu3.chr19 C 0 I 216 s rheMac3.chr16 130871 6 + 80904711 gttcac- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 135994 6 + 80997621 gttcac- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 134620 6 + 74645514 GTTCAC- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123277 6 + 75148670 gttcac- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75869289 6 + 122082543 -tttgct i mm10.chr11 I 2657 C 0 e canFam3.chr9 15695399 1848 - 61074082 I e calJac3.chrUn_GL286409 933850 4154 - 1291538 I a score=295337.000000 s hg38.chr17_GL383563v3_alt 237970 123 + 375691 cgttgctgttttccaagggcctcgaacagtgcccggcacatagcaaatcctcagtgaa-----cattagaggaataagtgaTTCAa-gaat---------------agagctgttagaaggtgttctggaggaagacgcatccg s panTro4.chr17 213903 122 + 82630442 cgttgctgttttccaagggccttgaacagcgcccggcacatagcaaatcctcagtgaa-----cattagaggaataagtgattcaa-gaat---------------agagctgttagaag-tgttctggaggaagacgcatctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 101701 118 + 73212453 cattgctgttttccaggggcctcgaacagtgcctCCAATGT------TCCTCAGAGAA-----CATTagaggaataagtgattcaacaaat---------------agagttgttagaaggtgttttgcaggaagacgcatctg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 218997 124 - 81552678 cattgctgttttccaagggcctcgaacagtgcctggcccatagcaaatcctcagtgaa-----cattagaggaataagtgattcaacgaat---------------agagttgttagaaggtgttttggaggaagacgcatctg i nomLeu3.chr19 I 216 C 0 s rheMac3.chr16 130877 124 + 80904711 cacggctgttttccaagggcctcaaacagtgcccggcacgtggcaaatcctcagtgaa-----cattagaggagtaagtgattcaatgaat---------------agagttgtgagaaggtgttttggaggaagatacatctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 136000 124 + 80997621 cacggctgttttccaagggcctcaaacagtgcccggcacgtggcaaatcctcagtgaa-----cattagaggagtaagtgattcaatgaat---------------agagttgtgagaaggtgttttggaggaagatacatctg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 134626 124 + 74645514 CACGGCTGTTTTCCAAGGGCCTCAAACAGTGCCCGGCACGTGGCAAATCCTCAGTGAA-----CATTAGAGGAGTAAGTGATTCAATGAAT---------------AGAGTTGTGAGAAGGTGTTTTGGAGGAAGATACATCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123283 124 + 75148670 cacggctgttttccaagggcctcaaacagtgcccggcacatggcaaatcctcagtgaa-----cattagaggagtaagtgattcgatgaat---------------agagttgtgagaaggtgttttggaggaagatacatctg i chlSab2.chr16 C 0 C 0 s mm10.chr11 75869295 143 + 122082543 cattactgttttctaagagtctgaaacagtata-ggcacatagaaaatacccaaggaaGgaaggaaggaaggagcgaatgaatgaatgaatgaatgGCTAcaaggcagtcttgttagagtgcattttggaagaagacacagcta i mm10.chr11 C 0 C 0 e canFam3.chr9 15695399 1848 - 61074082 I e calJac3.chrUn_GL286409 933850 4154 - 1291538 I a score=578018.000000 s hg38.chr17_GL383563v3_alt 238093 237 + 375691 gcttcatc-cctggcaccatcaattactacccaacgtctttgggcaagtgacctcttctctctaagcttcagtttctccac--ctgtcacagaggacaa-----------------tgggctcccgtggggatgaagcgagatgatcatgGCCTG--GCCCTTAGTGGGCACTCAGCTCACATCTGCTATGAACGATGGGAGTCCTTCGGTGTGCCTGTGTGTGAACGATGAACTCACGGACTGGAGCACTGTGCTGAA s panTro4.chr17 214025 237 + 82630442 gcttcatc-cctggcaccatcaattactacccgacgtctttgggcaagtgacctcctctctctaagcttcagtttctccac--ctgtcacagaggacaa-----------------tgggctcccgtggggatgaagcgagatgatcatgGCCTG--GCCCTTAGTGGGCACTCAGCTCACGTCTGCTATGAACGATGGGAGTCCTTCGGTGTGCCTGCGTGTGAACGATGAACTCACGGACTGGAGCACTGTGCTGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 101819 239 + 73212453 gcttcatc-cctggctccatcaattaccacccgacgtctttgggtgagtgacctcctctctctaagcttcagtttctccacaactgtcacagaggacaa-----------------CGGGCTCCCGTGGGGATGAAGCGAGATGTTCATGGCCTG--GCCCTTAGTGGGCACTCAGCTCACTTCTGCTATGAATGATGGGACTCCTTCGGTGTGCCTGGGTGTGAACGATGAACTCACGGACTGGAGCACTGTGCTGAA i ponAbe2.chr17 C 0 T 6332 s nomLeu3.chr19 219121 236 - 81552678 gcttcatc-cctgggtccatcaattactacccgacgtctttgggcaagtgacctcctctctctaagcttcagtttctccaa--ctgtCGCAGAGGACAG-----------------TGGGCTCCCGTGGGGATGAA-CGAGACGATCATGGCCTG--GCCCTTAGTGGGCACTCAGCTCACGTCTGCTATGAACGACGGGAGCCCTTCGGTGAGCCTGGATGTGAACGATGAACTCACGGACTGGATCACTGCGCTGAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 131001 236 + 80904711 gcttcaag-cctggctccatcaggcac-atctagcgtctttgggctcgtgaactcctcgctctaagcttcagtttctccaa--ctggcacaggggacaa-----------------tGGGCTCCCGTGGGGAAGAAGCGGGATGTTCACGGCCTG--GCCCTTAGTGGGCACTCAGCTCATGCCTGCTGTGAATGATGGGACTCCTTTCGCGTGCCTGGGTGTGAACAACGAACTCGCGGACTGGGGCACAGCGCTGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 136124 236 + 80997621 gcttcaag-cctggctccatcaggcac-atctagcgtctttgggctcgtgaactcctcgctctaagcttcagtttctccaa--ctggcacaggggacaa-----------------tGGGCTCCCGTGGGGAAGAAGCGGGATGTTCACGGCCTG--GCCCTTAGTGGGCACTCAGCTCATGCCTGCTGTGAATGATGGGACTCCTTTCGCGTGCCTGGGTGTGAACAACGAACTCGCGGACTGGGGCACAGCGCTGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 134750 236 + 74645514 GCTTCAAG-CCTGGCTCCAGCAGGCAC-ATCTAGCGTCTTTGGGCTCGTGAACTCCTcgctctaagcttcagtttctccaA--CTGGCACAGGGGACAA-----------------TGGGCTCCCGTGGGGATGAAGTGGGATGTTCACGGCCTG--GCCCTTAGTGGGCACTCAGCTCGTGCCTGCTGTGAACGACGGGACTCCTTTCGCGTGCCTGGGTGCGAACAACGAACTCGCGGACTGGGGCACAGCGCTGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123407 236 + 75148670 gcttcaag-cctggctccatcaggcac-atctagcgtcttcgggctcgtgaccgcctcgctctaagcttcagtttctccaa--ctggcacaggggacaa-----------------tGGGCTCCCGTGGGGATGAAGTGGGATGTTCACGGCCTG--GCCCTTAGTGGGCACTCAGCTTGTGCCTGCTGTGAACGACGGGACTCCTTTCGTGTGCCTGGGTGTGAACAACGAACTCGCGGACTGGGGCACAGCGCTGAG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75869438 218 + 122082543 gctttaactcctggctccattaatcactccttggggtctttgggcaagtga---cctttctttgagcctcagctattcctt--ctgtcat-ggggacaaaatcctgagtcccttgctgggcttctgtgaggaAGATG-GATGTGACCAACATCTATTGTCATTATTAGCC----------TTTCTGGTGTG-----------------TGTGTGTGTGTGTATATACAGTTACCACA-------GAGGACTATGTTGGG i mm10.chr11 C 0 I 9 s canFam3.chr9 15697247 225 - 61074082 gcttcaagccctggttctattgattaccacttggggtctttgggcaagtgatctcctttc--------tcagtttccccat--ctgtcacataggacta--caatgagtacctcactgggctcctgagaggataaagctagataTTCACTGTCTA--GCCCACAGTGGGTGCCAGACT--------------------GGATTCCTTTGGCATGCATGGGCAGGACAACTGGCCCAGTAGACTAGAGCACAGTGGTGAC i canFam3.chr9 I 1848 C 0 e calJac3.chrUn_GL286409 933850 4154 - 1291538 I a score=305126.000000 s hg38.chr17_GL383563v3_alt 238330 136 + 375691 AGAGTCAGCAGCCTCTTGGATCTCTCAGTGCCTCAGAGGCAAACTTCTCCAGTGCACAGACGTGGGCTCAGGTAGACGCCCCAGGCAAGGGGCAGGGGAAGATGGGA-TGGCTCAGTCCATCTGCAGGGGTGC----A-GTG s panTro4.chr17 214262 136 + 82630442 AGAGTCAGCAGCCTCTTGGATCTCTCAGTGCCTCAGAGGCAAACTTCTCCAGTGCACAGACATGGGCTCAGGTAGACACCCCAGGCAAGGGGCAGGGGAAGATGGGA-TGGCTCAGTCCATCTGCAGGGGTGC----A-GTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 95726 136 + 73212453 AAAGTCAGCAGCCTCTTGGATCTCTCGGTGCCTCAGAGGCAAACTTCTCCAGTGCACAGACATGGGCTCAGGTAGACGCCCCAGGCAAGGGGCAGGGGAGGATGGGA-TGGCTCAGTCCATCTGCAGGGGTGC----A-GTG i ponAbe2.chr17 T 6332 I 6206 s nomLeu3.chr19 219357 134 - 81552678 AAAGTCAGCAGCCTCCTGGA--TCTCAGTGCCTCAGAGGCAAACTTCTCCGGTGCACAGACATGGGCTCAGGTAGATGCCCCAGGCAAGGGGCAGGGGAGGACGGGA-TGGCTCAGTCCATCTGCAGGGGTGC----A-GTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 131237 128 + 80904711 AAAGTCAGCAGCCCCTTGGATCT--------CTCAGAGGCAAACTCCTCCAGCGCACAGGCAC-CGCTCAGGCAGACGCCCCAGGCAAGGGGCAGGGGAGGGTGGGA-CGGCTGAGTCCGCCTACAGGAGCAC----ACGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 136360 128 + 80997621 AAAGTCAGCAGTCTCTTGGATCT--------CTCAGAGGCAAACTTCTCCAGCGCACAGGCAC-CGCTCAGGCAGACGCCCCAGGCAAGGGGCAGGGGAGGGTGGGA-CGGCTGAGTCCGCCTACAGGAGCAC----ACGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 134986 127 + 74645514 AAAGTCAGCAGCCTCTTGGATCT--------CTCAGAGGCAAACTTCTCCAGCGCACAGGCAC-CGCTCAGGTAGACGCCCCAGGCaaggggcaggggagggtgggA-CGGCTGAGTCCGCCTACAGGGGCAC----A-GTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123643 127 + 75148670 AAAGTCAGCAGCCTCTTGGATCT--------CTCAGAGGCAAACTTCTCCAGTGCACAGGCAC-CGCTCAGGTAGACGCCCCAGGCAAGGGGCAGGGGAGGGTGGGA-CGGATGAGTCCGCCTACAGGGGCAC----A-GTG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75869665 129 + 122082543 AAGTTCTTC--TCTTTGGGATCTGTTGGCATCTCAGGGTAAAACTTCCTATGCGGG--------GGCTCAGACTGGCACTTCAAACAAGTGACA--GGAAGGTGGGAGTGGGTCAGTCTGTCTTCGAGGATGCTACTG-GTG i mm10.chr11 I 9 C 0 s canFam3.chr9 15697472 118 - 61074082 AAAGT------CCTCTTGGACTGGAGAGCAACTCTGAATGTTCTTTCTCCAGCACATAGACACAGGCACAGGTAGGCACCCCAAATAAGGGGCAGGGAAG--TGGGG-GGGACTACTCTGCCCCCAC--------------- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 933850 4154 - 1291538 I a score=369103.000000 s hg38.chr17_GL383563v3_alt 238466 141 + 375691 CAGGAGTCCCCATGAGGCAGACTGCCCTGGGGGCTGGTGAGCACCAGGAGCCCCCTCCTCCTGCCAC-CACC-CATGTGTGGGAGGCCAGGAGGCTGCACTGATAGCGGGTCTCTCTGGCAGAGCCACAGAGGCGTGGGAGGC s panTro4.chr17 214398 141 + 82630442 CAGGAGTCCCCATGAGGCAGACTGCCCTGGGGGCTGGTGAGCACCAGGAGCCCCCTCCTCCTGCCAC-CACC-CATGTGTGGGAGGCCAGGAGGCTGCACTGATAGCAGGTCTCTCTGGCAGAGCCACAGAGGCGTGGGAGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102068 85 + 73212453 CAGGAGTCCCCACGAGGCAGACTGCCCTGGGGGCTGGTGGGCACCAGGAGCCCCTACCTCCTGCCAC-CACC-CATGT--------------------------------------------------------GTGGGAGAC i ponAbe2.chr17 I 6206 C 0 s nomLeu3.chr19 219491 141 - 81552678 CAGGAGTCCCCACGAGGCAGACTGCCCTAGGGGCTGGTGGGCACCAGGAGCCCCCTCCTCCTGCCAC-CACC-CATGTGTGGGAGACCAGGAGGCTGCACTGATAGCGGGTCTCTCTGGCAGAGCCACAGAGGCGTGGGAGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 131365 140 + 80904711 CAGGAGTCCCCATGAGGCAGACTGCCCTGGGGGCTGGTGGGCACCA-GAGCCCGCTCCTCCTGCCAC-CGCC-CACATGTGGGAGGCCAGGAGGCTGCCCTGATAGCGGGTCCCTCCGGCACAGCCAGGGAGGCGCGGAAGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 136488 140 + 80997621 CAGGAGTCCCCATGAGGCAGACTGCCCTGGGGGCTGGTGGGCACCA-GAGCCCGCTCCTCCTGCCAC-CGCC-CACATGTGGGAGGCCAGGAGGCTGCCCTGATAGCGGGTCCCTCCGGCACAGCCAGGGAGGCGCGGGAGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 135113 141 + 74645514 CAGGAGTCCCCATGAGGCAGACTGCCCTGGGGGCTGGTGGGCACCAGGAGCCCGCTCCTCCTGCCAC-CGCC-CACACGTGGGAGGCCAGGAGGCTGCCCTGATAGCGGGTCTCTCCGGCAGAGCCACGGAGGCGTGGGAGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123770 141 + 75148670 CAGGAGTCCCCATGAGGCAGACTGCCCTGGGGGCTGGTGGGCACCAGGAGCCCGCTCCTCCTGCCAC-CGCC-CACACGTGGGAGGCCAGGAGGCTGCCCTGATAGCGGGTCTCTCCGGCAAAGCCACGGAGGCGTGGGAGGC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75869794 140 + 122082543 GGGGCGTCCAGAT-AGGCAAACTGCTCTGGGACCTGGTGGGTGCCAGGAGCCTCCTCCTGCTGCCACTTGTG-CCTGTGTGGGAGGCCAGGAGATAGCTGCGACCG-GGGGCTGTTTGACAGAGCTGCGGCAGCGTGGGAGGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15697590 125 - 61074082 ----ACCCTACAGGAGGAAG--------GGGGGCTGGTGGGCCCCAGCATCCTACTCCTCCTGCCAC-TTCTACATGTGTGGGAGGCCAGGAGCCTGTACTGATGGTTGGCTT----GGCAGAGCCATGGA-GTGTGGGAGGT i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 933850 4154 - 1291538 I a score=1766893.000000 s hg38.chr17_GL383563v3_alt 238607 471 + 375691 GAC---CAACACACTGAGGAAGTATGACCATCCGGGTCCCCCAGGGATGCCGTGACAGCAGCCCAGAGTGAGGCAGGCACAGACGGTGGGGTGCTCAGGCAGCCGCCCGCC--------CCAGCACCAGCCACCCACTCCCGAATGCACTCACAGACCTCCAGA-GGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAACCAGGAG----AGAAACAGCATGGAGAAACAGATGGCAGCTTGCGGTGAGCACAGGCCGCCTGCCCGGGAAGCAGGTGCCGCAAGGATGCTGGGCTGGGGCTTGGCTAGCACGGCCAGTTCCCACCAGCGGCT-GGGCTGGCTGCGGAG--TTTGGGAGCCCCCGATGATCCTGACCTTCCGTAGGCCTGTGAGGCCCAGACTGAGGAAGAGTCTCCCAGCT--GGAAGACCCCAGTGGGCTG--CTGGTCACC-TCCAGGATAAGTGAGTT s panTro4.chr17 214539 471 + 82630442 GAC---CAACACACTGAGGAAGTATGACCATCCGGGTCCCCCAGGGACACTGTGACAGCAGCCCAGAGTGAGGCAGGCACAGACGGTGGGGGGCTCCGGCAGCCGCCTGCC--------CCAGCACCAGCCACCCACTCCTGAATGCACTCACAGACCTCCAGA-GGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAACCAGGAG----AGAAACAGCATGGAGAAACAGATGGCAGCTTGCGGTGAGCACAGGCCGCCTGCCCGGGAAGCAGGTGCCGCAAGGATGCTGGGCTGGGGCTTGGCTAGCATGGCCAGTTCCCACCAGCGGCT-GGGCTGGCTGCGGAG--TTTGGGAGCCCCCGATGATCTTGACCTTCCGTAGGCCTGTGAGGCCCAGACTGAGGAAGAGTCTCCTAGCT--GGAAGACCCCAGTGGGCTG--CTGGTCACC-TCCAGGATAAGTGAGTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102153 471 + 73212453 GAC---CAACACCCTGAGGAAGTATGACCATCCGTGTCCCCCAGGGACGCTGTGACAGCAGCCCAGAGTGAGCCAGGCACAGATGGTGGGGTGCTCAGGCAGCTGCCCGCC--------CCAGCACCAGCCACCCACTCCTGAATGCACTCACAGACCTCCGGA-GGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAACCAGGAG----AGAAACAGCATGGAGAAACAGATGGCAGCTTGCGGTGAGCACAGGCCGCCTGCCTGGGAAGCAGGTGCCGCAAGGATGCTGGGCTGGGGCTTGGCTAGCACGGCCAGTTCCCACCAGCGGCC-GGGCTGGCTGCGGAG--TTTGGGAGTCCCCGATGATCCTGACCTTCCGTAAGCCTGTGAGGCCCAGACTGAGGAAGAATCTCCTAGTT--GGAAGACCCCAGTGGGCTG--CTGGTCACC-TCCAGGATAAGTGGGTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 219632 474 - 81552678 GAC---CAACACACTGAGGAAGTATGACCGTCCGGGTCCCCCAGGGATGCCATGACAGCAGCCCAGAGTGAGCCAGGCACAGATGGTGGGGTGCTCAGGCAGCCGCCCGCC--------CCAGCACCAGCCACCCACTCCTGAATGCACTCACAGACCTCCGGAGGGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAACCAGGAG----AGAAACGGCACGGAGAAACAGATGGCAGCTTGCGGTGAGCACAGGCCGCCTGCCCAGGAAGCAGGTGCCGCAAGGATGTTGGGTTCGGGCTTGGTTAGCACGGCCAGTTCCCACCAGCGGCT-GGGCTGGCTGTGGAG--TTTGGGAGTCCCCGATGATATTGAGCTTCCATAAGCCTGTGAGGCCCAGACTGAGGAAGATTTTCTTATATTGGGAAGACCCCAGTGGGTTG--CTGGTCACC-TCCAGGATAAGTGCGTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 131505 476 + 80904711 GAC---CAGCACACTGAGGAAGTGTGACCATCCGGGTGCCCCAGGGATGCCGTGACAGTAGCCCAGAGTGAGCCGGGCACAGACGGACGGGTGCTCAGGCAGCCGCCCACC--------GCAGCACCAGCCACCCACTCCTGAACGCACTCACAGGCCTCCGGA-GGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAACCAGGAGAGAAAGAAACAGCGTGGAGAAACAGATGGCAGCGCGCGGTGAGCACAGGCCGCCTGCCCGGGAAGCAGGTGCCACAAGGATGCCGGGCTCAGGCTTGGCGAGCACGGCCATTTCCCACCAGCGGCTGGGGCTGGCTGCGGAA--TTTGGGAGCCCCCGATGATCCTGACCTTCCATAGGCCTGTGAGGCCCAGACTGAGGAAGAGTCTCCTACTT--GGAAGACCTCAGTGTGCTG--CTTGTCACC-TCCAGGATAAGTGGGTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 136628 475 + 80997621 GAC---CAGCACACTGAGGAAGTGTGACCATCCGGGTCCCCCAGGGATGCCGTGACAGTAGCCCAGAGTGAGCCGGGCACAGACGGACGGGTGCTCAGGCAGCCGCCCACC--------GCAGCACCAGCCACCCACTCCTGAACGCACTCGCAGGCCTCCGGA-GGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAACCAGGAGAGAAAGAAACAGCGTGGAGAAACAGATGGCAGCGCGCGGTGAGCACAGGCCGCCTGCCCGGGAAGCAGGTGCCACAAGGATGCCGGGCTCAGGCTTGGCGAGCACGGCCAGTTCCCACCAGCGGCT-GGGCTGGCTGCGGAA--TTTGGGAGCCCCCGATGATCCTGACCTTCCATAGGCCTGTGAGGCTCAGACTGAGGGAGAGTCTCCTGCTT--GGAAGACCTCAGTGCACTG--CTTGTCACC-TCCAGGATAAGTGGGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 135254 475 + 74645514 GAC---CAGCACACTGAGGAAGTGTGACCGTCCGGGTCCCCCAGGGACGCCGTGACAGCAGCCCAGAGGGAGCCAGGCACAGACGGAGGGGTGCTCAGGCAGCCGCCCACC--------GCAGCACCAGCCACCCACTCCCGAACGCACTCACAGGCCTCCGGA-GGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAaccaggagagaaagaaacagcgTAGAGAAACAGATGGCAGCGCGCGGTGAGCACAGGCCGCCTGCCCGGGAAGCAGGTGCCACAAGGATGCCGGGCTCGGGCTTGGCGAGCACGGCCAGTTCCCACCAGCGGCT-GGGCTGGCTGCGGAA--TTTGGGAGCCCCCGATGATCCTGACCTTCCATAGGCCTGTGAGGCCCAGACTGAGGAAGAGTCTCCTACTT--GGAAGACCTCAGTGTGCTG--CTTGTCACC-TCCAGGATAAGTGGGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 123911 474 + 75148670 GAC---CAGCACACTGAGGAAGTGTGACCATCCGGGTCCCCCAGGGACGCCGTGACAGCAGCCCAGAGTGAGCCAGGCACAGACGGAGCGGTGCTCAGGCAGCCGCCCACC--------GCAGCACCAGCCACCCACTCCTGAATGCACTCACAGGCCTCCGGA-GGGGGCCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAACCAGGAGAGAAAGAAACAGCGTGGAGAAACAGATGGCCGCGCGCGGTGAGCACAGGCCGCCTGCCCGGGAAGCAGGTGCCACAGGGATGCCGGGCTCGGGCTTGGCGAGCACGGCCAGTTCCCACCAGTGGCT-GGGCTGGCTGCGGAA---TTGGGGGCCCCCGATGATCCTGACCTTCCGTAGGCCTGTGAGGCCCAGACTGAGGAAGAGTCTCCCACTT--GGAAGACCTCAGTGTGCTG--CTTGTCACC-TCCAGGATAAGTGGGTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 938004 470 - 1291538 GAC---CAACACACTGAGGAAGTGTGACCATCCGGGTCCCCCGGGGACGTTGTGACAGCAGCCCAGAATGAGCTGGGCACAGATGGAGGGGTGTTCAGGCAGCCACCTGCC--------CCGGCACCAGCCACCCACTCCTGAATGCACTCACAGACCTCCGGA-GGGGGCCC-CCGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGAAGCAGGAG----AGAGACCACATGGAGAAGCAGATGGCAGCTTGCAGTGAGCACAAGCTGCCTGCCCGGGGAGCAGGTGCCACAAGGATGAGGGGCTTGGGCTTGGCAAGCACGGCCAGTCCCCACCGGCTGCT-AAGCTGGCTGCGGAG--TCTGGGAGCCCCCAATGATCCTGATCTTCCAGAAGTCTGTGAGGCCCAGACTGAGGAGGAGTCTCCTCGTT--GGAAGACCCCAGCGGGCTC--CTGGTCACC-TCCAGGATATGAGAGTT i calJac3.chrUn_GL286409 I 4154 C 0 s mm10.chr11 75869934 437 + 122082543 GACCAACAACACACTGAGGAAGTGTGGCCACCCAGGTCCCCCAGGAATGTTGCTACAGCAGCTGAGAGCAAGCCAGGGACAGATGGTAGGGTACTCAGGCAGCCACCTGTC--------CCTGCA-AAGCCACCCACTCCTCAGTGCGCTCACGGGCCTGTGAA-AGGGGCCCTCAGGCAAAGCTGTTTGCAGCAAGAATCCAAACTGCAAGCAAT----------GGAG----ACATTCAGCATGGTGAGGCAGATGGCAGCCTGCAGTGA-CACAGGCCGCCAGCCAGGGAGGCAGGTGCTG---AGGTGCTGGGCTCA------GCAGTCACAGGCAATT--GGATGGGGATT-GGG--GGGTGGGGAGGGGGTGGGGGC------TGTCCCAGACTCTC-------CTGTGAAGCCCAGG-TGAGGGACAGCTCTGCCAGT--GTATGACCCTATTAGAGTA--CCACTCACC-TCCAGTCTGGGTGGGCT i mm10.chr11 C 0 I 154 s canFam3.chr9 15697715 444 - 61074082 GAC---CAACACAATGAGGAAGTCTGACCACCCGGGTCCCCCCGGGACGCTGTGACAGCAGTCCAG----AGCCAGACACAGATGGTGGGGCACTCAAGCAGCCGCTCGCCTGCCTGCTCCAGTGCCAGCCACCCACTCCTGAGTGCGCTTGTGGGCCTCCGGG-GGGGTTCCTCTGGCAAAGCTGTTTGCAGCAAAAATCCAAACTGCAAGTAACAGCAGGACCAGGAG----AGAACCAGCGTGGGGAAGCAGATGGCA-------GTGAGCACAGGCTGCCAGCCTGGAAGGCAGGCGCCATGAGGGTGCCGGGCT------TGGTTGGCACAGCTGCTCCCCACTGGTG--C-TGGCTTGCCGTTGAG-------GAGCTCTTGCTTCTCCTGGCTTCCTGCAAGCCTGTG---------CCAAGGTGGACCCTCC-------ACGGGGCCTACCCGGGCTGTACTGGTCACCATCCAGGCTGTGCAATTG i canFam3.chr9 C 0 C 0 a score=55962.000000 s hg38.chr17_GL383563v3_alt 239078 19 + 375691 GGAGAGGATTTAAAAACCA s panTro4.chr17 215010 19 + 82630442 GGAGAGTATTTTAAAACCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102624 19 + 73212453 GGAGATTATTTAAAAACCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 220106 18 - 81552678 GGAGATTA-TTAAAAACCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 131981 19 + 80904711 GCAGATTATTTAAAGACCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 137103 19 + 80997621 GCAGATTATTTAAAGACCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 135729 19 + 74645514 GGAGATCATTTAAAGACCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 124385 19 + 75148670 GGAGATCATTTAAAGACCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 938474 19 - 1291538 GGAGATTATTTAAAGACCA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15698159 19 - 61074082 AGAGATGAGTTAAAGACCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I a score=369976.000000 s hg38.chr17_GL383563v3_alt 239097 127 + 375691 ACCCTgccaggcatggcggctcatgcctgtaatcccagcacttagggcagcagaggcaggaggattggttgagctcaggagtttgaggccagccttggcaacatcgtgagatgccaact--ccacaaa---a s panTro4.chr17 215029 126 + 82630442 ACCCTgccaggcatggcggctcatgcctataatcccagcacttagggcagcagaggcaggaggactggttgagctcaggagtttgaggccagccttggcaacatagtgagatgccaact--ccacaaa---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102643 126 + 73212453 ACCCTgccaggcatggcggctcatgcctgtaatcccagcacttagggcagcagaggcaggaggattggttgagctcaggagtttgaggctagccttggcaacatcacgagatgcaaact--ccacaaa---- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 220124 130 - 81552678 ACCCTgccgggcatggcggctcgtgcctgtaatcccagcacttagggcagcagaggcgggaggactggttgggttcaggagtttgagaccagccttggcaacatcgcgagatgccaact--ccacaaaaaaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 132000 127 + 80904711 ACCCTgccgggcatggcggctcatgcctgtaatcccagcacttagggcagcagaggcaggaggactggttgagttcaggagtttgaggccagccttggcaacatcgtgagatgccagct--ccaccca---a i rheMac3.chr16 C 0 C 0 s macFas5.chr16 137122 127 + 80997621 ACCCTgccgggcatggcggctcatgcctgtaatcccagcacttagggcagcagaggcaggaggactggttgagttcaggagtttgaggccagccttggcaacatcgtgagatgccagct--ccaccaa---a i macFas5.chr16 C 0 C 0 s papAnu2.chr16 135748 127 + 74645514 ACCctgccgggcatggcggctcatgcctgtaatcccagcacttagggcagcagaggcaggagaactggttgagttcaggagtttgaggtcagccttgGCAACATCGTGAGAtgccatct--ccacaaa---a i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 124404 129 + 75148670 ACCCTgctgggcatggcggctcatgcctgtaatcccagcacttagggcagcagaggcaggaggactggttgagttcaggagtttgaggccagccttggcaacatcgtgagatgccatctaccccccaa---a i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 938493 124 - 1291538 ATCCTgccaggcatggtggctcatgcctgtaatcccagcccttagggcagcagaggcaggaggactggttaagctcaggagtttgagactagccatg---acttagcaagatgccatcC--ACACAAa---a i calJac3.chrUn_GL286409 C 0 I 155 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C a score=31811.000000 s hg38.chr17_GL383563v3_alt 239224 14 + 375691 gaaaaaaaaaaaaa s panTro4.chr17 215155 13 + 82630442 -aaaaaaaaaaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102769 13 + 73212453 -aaaaaaaaaaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 220254 14 - 81552678 aaaaaaaaaaaaaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 132127 14 + 80904711 aaaaaaaaaaaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 137249 14 + 80997621 aaaaaaaaaaaaAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 135875 14 + 74645514 aaaaaaaagaagaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 124533 14 + 75148670 aaaaaaaaaaaaaA i chlSab2.chr16 C 0 I 25 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=1911.000000 s hg38.chr17_GL383563v3_alt 239238 1 + 375691 a s panTro4.chr17 215168 1 + 82630442 a i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102782 1 + 73212453 a i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 220268 1 - 81552678 a i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 132141 1 + 80904711 a i rheMac3.chr16 C 0 I 1829 s macFas5.chr16 137263 1 + 80997621 A i macFas5.chr16 C 0 I 2 s papAnu2.chr16 135889 1 + 74645514 a i papAnu2.chr16 C 0 I 2 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 124547 25 + 75148670 I a score=132557.000000 s hg38.chr17_GL383563v3_alt 239239 114 + 375691 tttctcccattctgtaggttgcctgttcactttgatcatagtttcctttgctgtgtggaagctctttagtttaattagatcccatttgtctattttggcttttgttgccattgc s panTro4.chr17 215169 114 + 82630442 tttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgtggaagctctttagtttaattagatcccatttgtctattttggcttttgttgccattgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102783 114 + 73212453 attctcccattctgtaggttgcctgttcactctgatggtgatttcttttgctgtgcagaagctctttagtttaattagatcccatttgtctattttggcttttgtcgccattgc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 220269 114 - 81552678 aaaatcccattctgtaggttgcctgttcactctgatggtggtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 137266 99 + 80997621 Attctcccattctgtaggttgcttgttcactctgatggtagtttcttttgctgtgcagaagctcttta---------------atttgtctattgtggcttttgttgccattgt i macFas5.chr16 I 2 C 0 s papAnu2.chr16 135892 114 + 74645514 attctcctattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttgattagatcccatttgtctattttgacttttgttgccattgt i papAnu2.chr16 I 2 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 124547 25 + 75148670 I e rheMac3.chr16 132142 1829 + 80904711 I a score=1206498.000000 s hg38.chr17_GL383563v3_alt 239353 676 + 375691 ttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtaaagcctaggttttcttctagggtttttatggttttaggtctaacatttaagtctttaatccatcttgaattaatttttgtataaggtg-taaggaagggatccagtttcagctttccacgtatggctagcc--agttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtattatttctgaggcctctgttgtgttccattggtctatatctctgttttggtaccagtaccatgctgttttggttactatagccttgtagtatagtctgaaatcaggtagcgtgatgcctccagctttgttcttttggcttagaattgacttggcaatgcgggctcttttttggttccatatgaactttaaagtagttttttccaattctgtgaagaaagtcattggtagcctgatggggatggcaatgaatctacaaattaccttgggcagtatggccattttcacaatattgattcttcctatccatgagcatggaatgttcttccatttgtttgtgccctctcttattttgttgagcagtggtttgtagttctccttgaagaggtccttcacatcc s panTro4.chr17 215283 674 + 82630442 ttttggcgttttagtcatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctaaggtttttatggttttaggtctaacatttaagcctttaatccatcttgaattaatttttgtataaggtg-taaggaagggatccagtttcagctttctacatatggctagcc--agttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcagatttgtcaaagatcagatggttgtagatgtgtggtattatttctgaggcctctgttgtgttccattgatctacatctctgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtctgaagtcaggtagcgtgatgcctccagctttgttcttttggcttagaattgtcttggcaatgcgggcccttttttggttccatatgaactttaaagt--ttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcactgaatctacaaattaccttgggcagtatggccattttcacaatattgattcttcctatccatgagcatggaatgttcttccatttgtttgtgccctctcttattttgttgagcagtggtttgtagttcaccttgaagaggtccttcacatcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 102897 675 + 73212453 ttttggcattttagtcatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttttagggtttttatggttttaggtctaatgtttaagtctttaatccgccttgaattaatttttgtgtaaggtg-taaggaagggatccagtttcagctttctacgtatggctagcc--agttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgagggttctgttctgttccattggtctatatctctgttttggtaccagtaccatgctgttttgcttactgtagccttgtagtatagtttgaagtcaggtagcatgatgcttccag-tttgttcttttggcttaggattctcttggcaatgtgggctcttttttggttccaaatgaactttaaggtagttttttccaattctgtgaagaaagtcattggtagcttgatggagatggcattgaatccacaaattaccttgggcagtatggccattttcacgatattgattcttcctatccatgagcatggaacgttcttccatttgtttgtgtcctcttttattttgttgagcagtggtttgtagttctccttgaagaggtccttcacatcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 220383 674 - 81552678 ctttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctaacatgtaagtctttaatccatcttgaattaa-ttttgtataaggtgttaaggaagggatccagtttcagctttctacatatggctagcc--agttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcatgtttgtcaaagatcagatggttgtagatgtgtggtattatttccgggggctctgttctgttccattggtctatatctctgttttggtaccaataccatgctgttttgattactgcagccttgtagcatagtttgaagtcaggtagcgtgatgcctccag-tttgttcttttggcttaggattctcttggcaatgcaggctcttttttggttccacatgaactttaaagtag-tttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctacaaattaccttgggtagtatggccattttcacaatactgattcttcctatccatgagcatggaatgttcttccatttgtttgtgtcctcttttattttgttgagcagtggtttgtagttctccttgaagaggtccttcacgtcc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 137365 678 + 80997621 tgttggtgttttagtcatgaagtccttgcccatgtccatatcctgaatggtgttgcctaggttttctactagggtttttacggttttaggtctaacacttaagtctttaatccatcttgaattaatttttgtataaggcg-taaggaagggatccagtttcagctttctacatatggctagccagagttttcccagcaccatttattaaagagggaatcctttccctatttcttgtttttatcaagtttgtcaaagatcagatggctgtagatgtgtggtattatttctgagggctctgttctgttccgttggtctatatctctgttttggtaccagtaccatactgttttggttactgtaggcttgtagtatagtttgaagtcaggtagcatgatgcctccagctttgtccttttggtttaggattctcttggcaatgtgggctcttttttggtgccatatgaactttaaagtagttttttccaattccgtgaagaaagtcattggtagcttgatggggatggcattaaatctgtaaattaccttgggcagtatggccattttcacaatattgattcttcctatccatgagcatggtatgttcttccatttgtttgtgtcctcttttatttcactgagcagtggtttgtagttctccttgaagaggtccttcacatcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 136006 676 + 74645514 ttttggtgttttagtcatgaagtccttgcccatgcctatgtcctgaatggtgttgcctaggttttcttctagggtttttatggttttaggtctaacacttaagtctttaatccatcttgaattaatttttgtataaggcg-taaggaagggatccagtttcagctttctacatatggctagcc--agttttcccagcagcatttattaaagagggaatcctttccctatttcttgtttttgtcaggtttgtcaaagatcagatggctgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctgttttggttactgtaggcttgtagtatagtttgaagtcaggtagcatgatgcctccagctttgtccttttggtttaggattctcttggcaatgtgggctcttttttggtgccatatgaactttaaagtagttttttccaattccatgaagaaagtcattggtaggttgatggggatggcattaaatctgtaaattaccttgggcagtatggccattttcacaatattgattcttcctatccatgagcatggtatgttcttccatttgtttgtgtcctcttttatttcactgagcagtggtttctagtcctccttgaagaggtccttcacatcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 124572 675 + 75148670 ttttggtgttttagtcatgaagtccttgcccatgcctatgtcctgaacggtattgcctaggttttcttctagggattttatggttttaggtctaacatttaagtctttaatccatcttgaattaatttttgtataaggtg-taaggaagggatccagtttcagctttctacatatggctagcc--agttttcccagcagcatttattaaagagggaatcctttccctatttcttgtttttgtcaggtttatcaaagatcagatggctgtagatgtgtggta-tatttctgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctgttttgcttactgtaggcttgtagtatagtttgaagtcaggtagcgtgatgcctccagctttgttcttttgacttaggattgtcttggcaatgcaggctcttttttggtgccatatgaactttaaagtagttttttccaattctgtgaagaaactcattggtagcttgatggggatggcattgaatctgtaaattaccttgggcagtatggccattttcacaatattgatccttcctatccatgagcatggtatgttcttccatttgtttgtgtcctcttttatttcactgagcagtggtttgtagttctccttgaagaggtccttcacatcc i chlSab2.chr16 I 25 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 132142 1829 + 80904711 I a score=362848.000000 s hg38.chr17_GL383563v3_alt 240029 296 + 375691 tttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggtac--------tctgttattgatgtataggaatgcttgtgattattgcacattgattttgtaccctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagacaacagggttttctagatatacaatcatgtcatctgcaaatagggacaatttgacttcctcttttcctaattgaataccctttatttctttctcctgcctgattgccctggccagag s panTro4.chr17 215957 296 + 82630442 tttgtaagttggattcctaggtattttagtctctttgaagcaattgtgaatgggagttcactcatgatttggtac--------tctgttattgatgtataggaatgcttgtcattattgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagacaacggggttttctaaatataccatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaataccctttatttccttctcctgcctaattgccctggccagaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 221057 304 - 81552678 cttgtaagtcagattcctgggtattttattctctttgatgcagttgtgaatgggagttcactcatgatttggctctctgtctgtctgttattggtgtataggaattcttgtgatttttgcacactgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagacaatggggttttctaaatatacaatcatgtcatctgcaaagagggacaatttgacttcctcttttcctaattgaataccctttatttctttctcctgcctgactgccctggccagaa i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 138043 304 + 80997621 cttgtaagttggattcctaggtattttattctctttaaagcagttgtgaatgggagttcactcacgatttggctctctgtttgtctgttactggtgtataagaatgcttgtgatttttgcacattgattttatatccggagactttgctgaagttgcttatcagtttaaggagattttgagctgagacaatggggttttctaaatagacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaactgaataccctttatttctttttcctgcctgattgcgctggccagag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 136682 289 + 74645514 cttgtaagttggattcctaggtattttattctctttaaagcagttgtgaatggaagttcattcatgatttggctctctgtttgtctgttactggtgtataagaatgcttgtgatttttgcacattgattttatatcctgagactttgctgaagttgcttatcagcttaaggagattttgagctgagacaatggggttttctaaatag---------------gcaaacagggacaatttgacttcctcttttcctaactgaataccctttatttctttctcctgcctgattgtgctggccagag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 125247 304 + 75148670 cttgtaagttggattcctagctattttattctctttgaagcagttgtgaatggaagttcattcatgatttggctttctgtttgtctgttactggtgtataagaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaagagattttgggctgagacaatggggttttctaaatagacaatcatgtcatctgcaaacagggacaatttgacttcttcttttcctaactgaatccccttgatttctttctcctgcctgactgcactggccagag i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 132142 1829 + 80904711 I e ponAbe2.chr17 103572 0 + 73212453 C a score=1426742.000000 s hg38.chr17_GL383563v3_alt 240325 830 + 375691 cttccaacagtatgttgaataggagtggcgagagagggcatccctgtcttgtgccagttttcaaagggaatgtttccagtatccagaatctacaaagaacttaaaacaaatttacaag-aaaaaatcaaacaaccccatcaaaaagtgggcaaaggataagaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaagtcaaaaccacaatgagataccatctcacaccagttagaatggcgatgattaaaaagtcagaaaacaacaggtgctggagaggatgtggagaaataggaacaattttacactgttgg-gggaatgtaaactagttcaaccattgtggaggacagtgtggtgattcctcagggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggactataaatcatgctgctataaagacacatgcacacgtatgtttattgcagcactattcacaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactggattaagaaaatgtggcacatatacaccatggagtactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacatggacacaggaaagggaacatcacactccagggactgttgtggggtggggggagggg s panTro4.chr17 216253 831 + 82630442 cttccaacactatgttgaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgtttccagtatccagaatctacaaagaacttaaaacaaatttacaag-aaaaaatcaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaaatcacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaaccgttgtggaagtcagtgtggcgattcctcagggatctagaactagaaataccatttgacccagccaccccattactgggtatatacccaaaggattataaatcatgctgctataaagacacatgcacacgtatgtttattgcggcattattcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactgcattaagaaaacgtggcacatatacaccatggagtactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacagaaaaccaaacaccgcatgttctcactcataggtgggaattgaacaatgagaacacatggacgcagggaggggaagaccacactccggggaccgttgtggggtggggggaggga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 103572 830 + 73212453 cttccaacaccatgttgaataggagtggcaagagagggcatccttgtcttgtgccagttttcaaagggaatgtttccagtatccagaatctacaaagaactt-aaacaaatttacaag-aaaaaatcaaacaaccccatcaaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaacgctcatcatcactggtcatcaaagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcagaaaacaacaggtgctagagaggatgtggagaaataggaacacttttacactgttgatgggactgtaaactagttcaactattgtggaggacagtgtggtgattcctcaaggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggattataaatcatgctgctgtaaagacacatgcgctcgtatgtttattgcggcactattcacaatagcaaagacttggaaccaatccaaatgtccatcaatgatagagcggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcacaaggacgaaaaaccaaacaccgcatgttctcactcataggtgggaactgaacaatgagaacacttggacgcagggtggggaacatcacacaccagagcctgtcgtggagtgagcggagggg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 221361 829 - 81552678 cttccaacattatgttgaataggagtggtgagagagggcatccttgtcttgtgccagttttcaaagggaatgtttcaagtatccagaatctacaaagaactt-aaactaatttacaag-aaaaaatcaaacaaccccatcaaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatactcaccatcactggtcaccagagaaatgcaaatcaaaaccacagtgagataccatctcataccagttagaatggcgatcgttaaaaagtcagaaaacaacaggtgctggagaggatgtggagaaatacgaaca-ttttacactgttggtgggactgtaaactagttcaaccactgtggaagacagtgtggtgattcctcaagggtctagaactagaaataccatttgacccagccatcccattactgggtgtatacccaaaggactataaatcatgctgctataaagacaaatgcacacatatgtttattgcggcactattgacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggataaagaaaatgtggcacatacacaccatgaaatactatgcagcaataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccattattctgagcaaactatcacaaggacagaaaaccaaacaccgcatgttctcactcacaggtgggaattgaacaatgagaacacttggacacaggaaggggaacatcacacactggggactgttgtggggaggggggagggg i nomLeu3.chr19 C 0 I 227 s macFas5.chr16 138347 823 + 80997621 cttccaacactgtgttgaacaggagtggtgagagagggcacccctgtcttgtgcccgttttcaaagggaatgctcccagtatccagaatccacaaataactt-aaacaaatttacaag-aaaaaatcagacaaccccatcaaaacatgggcgaaggaaatgaacagacacttctccaaagaagacatttatgcagccaacagacacacgaaaaaatgctcatcatcactcgccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttaggatgatgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacactttcacactgtaggtgggagtgcaaattaattgaaacattgtggaagacagtgtggcaattcttcaaggatctagaattagaaataccatttgacccagccatcccattaccaggtatatacccaaaggattataagtcatgctgctataaagacacatgcacacgtatgtttattgtggcactattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgacagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagtttgtgtcctttgtagggacatggatgcagctggaaaccatcattctcagcaaactatcacaaggacagaaaaccaaacaccacatgttctcactcataggtgggaactgaacaatgagaatacatggacaaagggtggggaacctcacacaccggggcctgttgtggggagggc------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 136971 823 + 74645514 cttccaacactgtgttgaacaggagtggtgagagagggcatccctgtcttgtgcccgttttcaaagggaatgctcccagtatccagaatccacaaataactt-aaacaaatttacaag-aaaaaatcagacaaccccatcaaaacatgggcaaaggaaatgaacagacacttctccaaagaagacatttatgcagccaacagacacacgaaaaaatgctcatcatcactcaccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatgatgatcattaaaaagtcaggaaacaacagatgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaacgagttcaaccattgtggaagacaatgtggcgattcctcaaggatctagaaccagaaataccatttgacccagccatcccattaccaggtatatacccgaaggattataaatcatgctgctataaagacacatgcatacgtatgtttattgcagcactattcacaacagcaaagacttggaaccaacccaaatgtccatcaatgacagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacacggatgaagctggaaaccatcattctcagcaaactatcgcaaggacagaaaaccaaacaccccatgttctcactcataggtgggaactgaacaatgagaatacatggacaaagggtggggaacatcacacaccagggcctgttgtggggagggc------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 125551 822 + 75148670 cttccaacactgtgttgaacaggagtggtgagagagggcgtccctgtcttgtaccagttttcaaagagaatgctcccagtatccagaa-atacaaataactt-aaacaaatttacaagaaaaaaacccaacaaccccatcaaaacgtgggtgaaggaaatgaacagacacttctccaaagaagacatttatgcagccaacagacacacgaaaaaatgctcatcatcactcaccatcagagaaatgcaaatcaaaaccacaatgagataccatctcacacctgttagaatgatgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactggtggtgggattgtaaactagttcaaccattatggaaaagagtatggcgattcctcaaggatctagaactagaaataccatttgacccagccatcccactactggggatatacccaaaggattataagtcatgttgctataaagacacatgcacacgtatgtttattgcagcactattcacaatagcaaagacttggaatcaacccaaatgtccatcaatgacagactaggttaagaaaatgtggcacatattcaccatggaatacgatgcagccat-aaaaaggatgagttcgtgtcctttgtagggacacggatgaagctggaaaccatcattctcagcaaactatcacaagaacagaaaaccaaacaccgcatgttctcactcataggtgggaaatgaacagtgagaatacatggacaaagggtggggaacatcacacactggggcctgctgtggggaggtg------- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 132142 1829 + 80904711 I a score=28172.000000 s hg38.chr17_GL383563v3_alt 241155 24 + 375691 ggagggatagcattaggagatata s panTro4.chr17 217084 24 + 82630442 ggagagatagcattaggagatata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104402 24 + 73212453 ggagggatagcattagaagatata i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 139170 24 + 80997621 ggagggagagcattgggagaaata i macFas5.chr16 C 0 C 0 s papAnu2.chr16 137794 24 + 74645514 ggagggagagcattgggagaaata i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126373 24 + 75148670 ggagggatagcattgggagaaata i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 132142 1829 + 80904711 I e nomLeu3.chr19 222190 227 - 81552678 I a score=179712.000000 s hg38.chr17_GL383563v3_alt 241179 112 + 375691 cctaatgctaaaatgaccagttaatgggtgcagcacaccaacatggcacaggtatacag-atgtaacgaacctgcacattgagcacatgtaccctagaacttaaagtatt-atT s panTro4.chr17 217108 111 + 82630442 cctaatgct-aaatgaccagttaatgggtgcagcacaccagcatggcacacgtatacag-atgtaacgaacctgcacgttgtgcacatgtaccctagaacttaaagtatT-CTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104426 110 + 73212453 cctaatgt--aaatgaccagttaacggatgcagcacaccaacatggcacgtgtatacag-atgtaacaaacctgcacattgtgcacacgtaccctagaacttaaagtatt-aaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222417 110 - 81552678 cctaatgt--aaatgatgagttaacgggtgcagcacaccagcatggcacatggatacat-atgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagcatt-aaa i nomLeu3.chr19 I 227 C 0 s macFas5.chr16 139194 110 + 80997621 cctaatgt--aaatgacgagttaatgggtgcagcacaccaacatggcacacgtatacat-acgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtatt-aaa i macFas5.chr16 C 0 I 8 s papAnu2.chr16 137818 111 + 74645514 cctaatgt--aaatgacgagttaatgggtgcagcacaccaacatggcacacgtatacat-acgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtattaaaa i papAnu2.chr16 C 0 I 8 s chlSab2.chr16 126397 111 + 75148670 cctaatgt--aaatgatgagttaatgggtgcagcacacctacatggcacatgtatacataacgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtatt-aaa i chlSab2.chr16 C 0 I 28 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 132142 1829 + 80904711 I a score=-5236.000000 s hg38.chr17_GL383563v3_alt 241291 19 + 375691 TAAGT------------cacacacacacaca s panTro4.chr17 217219 31 + 82630442 TAAGTcacactcacacacacacacacacaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104536 21 + 73212453 aaaaa----------aaaaGCCAAACACACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222527 14 - 81552678 aaaaa-----------------aCACCCCCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139312 17 + 80997621 -aaaG-----------CCCCCCCCACCCC-- i macFas5.chr16 I 8 C 0 s papAnu2.chr16 137937 18 + 74645514 -aaag----------cccccccccacccc-- i papAnu2.chr16 I 8 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 126508 28 + 75148670 I e rheMac3.chr16 132142 1829 + 80904711 I a score=6111.000000 s hg38.chr17_GL383563v3_alt 241310 3 + 375691 cac s panTro4.chr17 217250 3 + 82630442 cac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104557 3 + 73212453 CAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222541 3 - 81552678 CAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 133971 3 + 80904711 CAC i rheMac3.chr16 I 1829 C 0 s macFas5.chr16 139329 3 + 80997621 CAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 137955 3 + 74645514 cac i papAnu2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 126508 28 + 75148670 I a score=59152.000000 s hg38.chr17_GL383563v3_alt 241313 27 + 375691 acacacCAAAAAACCATGTAAGACCAA s panTro4.chr17 217253 27 + 82630442 acacacCAAAAAACCATGTAAGACCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104560 27 + 73212453 ACACACCAAAAAACCATGTAAGACCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222544 27 - 81552678 ACACACCAAAAAACCAGGTAAGACCAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 133974 27 + 80904711 ACACACCAAAAAAACACGTAAAACCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 139332 27 + 80997621 ACACACCAAAAAAACACGTAAAACCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 137958 27 + 74645514 acacaccaaaaaaacacgtaaaaCCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126536 26 + 75148670 ACACACC-AAAAAACACGTAAAACCAA i chlSab2.chr16 I 28 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698178 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=250718.000000 s hg38.chr17_GL383563v3_alt 241340 88 + 375691 CCCTGTGAAGCCACTTTTCT--------------TTTTTTAGTCAATCAACAAGCAGGAGAGAGGGGCCAGAAGGAAGAAATAAAGACCCAGCCTCAGTGGG s panTro4.chr17 217280 88 + 82630442 CCCTGTGAAGCCACTTTTCT--------------TTTTTTAGTCAATCAACAAGCAGGAGAGAGGGGCCAGAAGGAAGAAATAAAGACCCAGCCTCAGTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104587 88 + 73212453 CCCTGTGAAGCCACTTTTCT--------------TTTTTTAGTCAATCAACAAGCAGGAGAGAGGGGCCAGTAGAAAGAAATAAAGACCCAGCATCAGTGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222571 88 - 81552678 CTCTGTGAAGCCGCTTTTCT--------------TTTTTTAGTCAATCAACAAGCAGGAGAGAGGGGCCAGTAGGAAGAAATAAAGACCCAGCATCAGCGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 134001 88 + 80904711 CCCTGCGAAGCCACTTTTCT--------------TTCTTTAGTCAATCAACAAGCAGGAGAGAGGGGCCAGGAGGAAGAAATACAGACCCAGCGTCAGTGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 139359 88 + 80997621 CCCTGCGAAGCCACTTTTCT--------------TTCTTTAGTCAATCAACAAGCAGGAGAGAGGGGCCAGGAGGAAGAAATACAGACCCAGCGTCAGTGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 137985 88 + 74645514 CCCTGTGaagccacttttct--------------ttctttagtcaATCAACAAGCAGGAGAGAGGGGCAAGGAGGAAGAAATACAGACCCAGCGTCAGCGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126562 88 + 75148670 CCCTGTGAAGCCACTTTTCT--------------TTTTTTAGTCAATCAACAAGCAGGAGAGAGGGGCCAGGGGGAAGAAATACAGACCCAGCATCAGGGGG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15698178 102 - 61074082 CCATGTGAAGCCACTTTCCTACTTCAGAAGCCCCTCTTTCAGTCAATCAACAAACAGAAGAGAGGGGCCAGGAGATGAGAATACAGACTCGGCACCAATGGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=25746.000000 s hg38.chr17_GL383563v3_alt 241428 10 + 375691 CCAGTGGCGA s panTro4.chr17 217368 10 + 82630442 CCAGTGGCGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104675 10 + 73212453 CCAGTGGCGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222659 10 - 81552678 CCAGTGGCGA i nomLeu3.chr19 C 0 T 3 s rheMac3.chr16 134089 10 + 80904711 CCAGTGGCGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 139447 10 + 80997621 CCAGTGGCGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138073 10 + 74645514 CCAGTGGCGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126650 10 + 75148670 CCAGTGGCTA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=-308.000000 s hg38.chr17_GL383563v3_alt 241438 1 + 375691 C s panTro4.chr17 217378 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104685 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 134099 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s macFas5.chr16 139457 1 + 80997621 T i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138083 1 + 74645514 T i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126660 1 + 75148670 T i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e nomLeu3.chr19 222669 3 - 81552678 T a score=1500.000000 s hg38.chr17_GL383563v3_alt 241439 1 + 375691 G s panTro4.chr17 217379 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104686 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 134100 1 + 80904711 G i rheMac3.chr16 C 0 I 1 s papAnu2.chr16 138084 1 + 74645514 G i papAnu2.chr16 C 0 T 1 s chlSab2.chr16 126661 1 + 75148670 G i chlSab2.chr16 C 0 I 1 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e macFas5.chr16 139458 0 + 80997621 C e nomLeu3.chr19 222669 3 - 81552678 T a score=273.000000 s hg38.chr17_GL383563v3_alt 241440 1 + 375691 T s panTro4.chr17 217380 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104687 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 126662 1 + 75148670 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139458 0 + 80997621 C e nomLeu3.chr19 222669 3 - 81552678 T a score=10079.000000 s hg38.chr17_GL383563v3_alt 241441 22 + 375691 GAGATCCCAGCAAGGGCGACAT s panTro4.chr17 217381 22 + 82630442 GAGATCCCAGCAAGGGCAACAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104688 22 + 73212453 GAGACCCCAGCAAGGGCGACGT i ponAbe2.chr17 C 0 C 0 s chlSab2.chr16 126663 22 + 75148670 GAGAACCCAGCGAGGGCTACGT i chlSab2.chr16 I 1 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139458 0 + 80997621 C e nomLeu3.chr19 222669 3 - 81552678 T a score=2898.000000 s hg38.chr17_GL383563v3_alt 241463 4 + 375691 CAGG s panTro4.chr17 217403 4 + 82630442 CAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104710 4 + 73212453 CAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222666 4 - 81552678 CGAG i nomLeu3.chr19 T 3 C 0 s chlSab2.chr16 126685 4 + 75148670 CAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139458 0 + 80997621 C a score=15921.000000 s hg38.chr17_GL383563v3_alt 241467 14 + 375691 GAGAGACCCCAGCA s panTro4.chr17 217407 14 + 82630442 GTGAGACCCCAGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104714 14 + 73212453 GAGAGTCTCCAGCA i ponAbe2.chr17 C 0 T 28 s nomLeu3.chr19 222670 14 - 81552678 GTGAGACCCCAGCG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 14 + 80997621 GAGAGACCCCAGCA i macFas5.chr16 C 0 C 0 s chlSab2.chr16 126689 14 + 75148670 GAGAGACCCCAGCG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I a score=11817.000000 s hg38.chr17_GL383563v3_alt 241481 10 + 375691 AGGGCTACGT s panTro4.chr17 217421 10 + 82630442 AGGGCTACGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104700 10 + 73212453 AGGGCGACGT i ponAbe2.chr17 T 28 C 0 s nomLeu3.chr19 222684 10 - 81552678 AGGGTGACGT i nomLeu3.chr19 C 0 T 28 s macFas5.chr16 139472 10 + 80997621 AGGGCGACGT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 126703 10 + 75148670 AGGGTGACGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I a score=5539.000000 s hg38.chr17_GL383563v3_alt 241491 6 + 375691 CAGGGT s panTro4.chr17 217431 6 + 82630442 CAGGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104710 6 + 73212453 CAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222666 6 - 81552678 CGAGGT i nomLeu3.chr19 T 28 C 0 s macFas5.chr16 139482 6 + 80997621 CAGGGA i macFas5.chr16 C 0 T 30 s chlSab2.chr16 126713 6 + 75148670 CAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I a score=19665.000000 s hg38.chr17_GL383563v3_alt 241497 26 + 375691 GAGACCCCAGCGAGGGTGACGTCAGG s panTro4.chr17 217437 26 + 82630442 GAGACCCCAGCAAGGGTGACTTCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104716 26 + 73212453 GAGTCTCCAGCAAAGGCGACTTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222672 26 - 81552678 GAGACCCCAGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 126719 26 + 75148670 CAGACCCCAGCGAGGGCGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139488 30 + 80997621 T a score=27341.000000 s hg38.chr17_GL383563v3_alt 241523 24 + 375691 GAGAGACCCCAGCGAGGGTGACTT s panTro4.chr17 217463 24 + 82630442 GTGAGACCCCAGCGAGGGCGACGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104742 24 + 73212453 GAGAGTCTCCAGCAAGGGCGACGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222698 24 - 81552678 GAGAGACCCCGGCGAGGGTGACGT i nomLeu3.chr19 C 0 T 56 s macFas5.chr16 139458 24 + 80997621 GAGAGACCCCAGCAAGGGCGACGT i macFas5.chr16 T 30 C 0 s chlSab2.chr16 126745 24 + 75148670 GACAGACCCCAGCGAGGGCGACGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I a score=4600.000000 s hg38.chr17_GL383563v3_alt 241547 4 + 375691 CAGG s panTro4.chr17 217487 4 + 82630442 CAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104766 4 + 73212453 CAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222666 4 - 81552678 CGAG i nomLeu3.chr19 T 56 C 0 s macFas5.chr16 139482 4 + 80997621 CAGG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 126769 4 + 75148670 CAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e papAnu2.chr16 138085 1 + 74645514 T e rheMac3.chr16 134101 1 + 80904711 I a score=42758.000000 s hg38.chr17_GL383563v3_alt 241551 28 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGG s panTro4.chr17 217491 28 + 82630442 AAGAGACCCCAGGAAGGATGACTTCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104770 28 + 73212453 GAGAGTCCCCAGCAAGGGCGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222670 28 - 81552678 GTGAGACCCCAGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139486 28 + 80997621 GACAGACCCCGGCGAGGGCGGCGTCAGG i macFas5.chr16 C 0 T 56 s papAnu2.chr16 138084 28 + 74645514 GAGAGACTCCGGCGAGGGCGACGTCAGG i papAnu2.chr16 T 1 C 0 s chlSab2.chr16 126773 28 + 75148670 GAGAGACCCCAGCGAGGGTGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=17713.000000 s hg38.chr17_GL383563v3_alt 241579 11 + 375691 GAGAGACCCCA s panTro4.chr17 217519 11 + 82630442 GAGAGACCTCA i panTro4.chr17 C 0 T 28 s ponAbe2.chr17 104798 11 + 73212453 GAGAGTCCCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222698 11 - 81552678 GAGAGACCCCG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 11 + 80997621 GAGAGACCCCA i macFas5.chr16 T 56 C 0 s papAnu2.chr16 138112 11 + 74645514 GAGAGACCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126801 11 + 75148670 GACAGACCCCA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=26835.000000 s hg38.chr17_GL383563v3_alt 241590 17 + 375691 GCGAGGGTGACGTCAGG s panTro4.chr17 217502 17 + 82630442 GGAAGGATGACTTCGGG i panTro4.chr17 T 28 C 0 s ponAbe2.chr17 104809 17 + 73212453 GCAAGGGCGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222709 17 - 81552678 GCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139469 17 + 80997621 GCAAGGGCGACGTCAGG i macFas5.chr16 C 0 T 28 s papAnu2.chr16 138123 17 + 74645514 GCGAGGGCGGCGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126812 17 + 75148670 GCGAGGGTGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=44395.000000 s hg38.chr17_GL383563v3_alt 241607 28 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGG s panTro4.chr17 217519 28 + 82630442 GAGAGACCTCAGCAAGGGCGACGTCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104826 28 + 73212453 GAGAGTCCCCAGCAAGGGTGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222726 28 - 81552678 GAGAGACCCCGGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 28 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGG i macFas5.chr16 T 28 T 28 s papAnu2.chr16 138140 28 + 74645514 GACACACCCCGGGGAGGGCGGCGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126829 28 + 75148670 GACAGACCCCAGCGAGGGCGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=47931.000000 s hg38.chr17_GL383563v3_alt 241635 31 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGGGAG s panTro4.chr17 217547 31 + 82630442 GAGAGACCCCAGCAAGTGTGACTTCAGGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104854 31 + 73212453 GAGAGTCCCCAGCAAGGGTGACGTCAGGGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222754 31 - 81552678 GAGAGACCCCAGCGAGGGCGACGTCAGGGAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 31 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGGAC i macFas5.chr16 T 28 C 0 s papAnu2.chr16 138168 31 + 74645514 GACAGACCCCGGCGAGGGCGGCGTCAGGGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126857 31 + 75148670 GAGAGACCCCAGCGAGGGCTATGTCAGGGAG i chlSab2.chr16 C 0 T 168 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=41717.000000 s hg38.chr17_GL383563v3_alt 241666 27 + 375691 AGACCCCAGCGAGGGTGACATCAGGAA s panTro4.chr17 217578 27 + 82630442 AGACCCCAGCGAGGGCGACATCGGGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104885 27 + 73212453 AGTTCCCAGCAAGGGCGACGTCAGGGA i ponAbe2.chr17 C 0 T 224 s nomLeu3.chr19 222785 27 - 81552678 AGACCCCGGGGAGGGCGATATCAGGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139489 27 + 80997621 AGACCCCGGCGAGGGCGGCGTCAGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138199 27 + 74645514 AGACCCCGTTGAGGGCGGCGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126720 27 + 75148670 AGACCCCAGCGAGGGCGACGTCAGGGA i chlSab2.chr16 T 168 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=840.000000 s hg38.chr17_GL383563v3_alt 241693 2 + 375691 GA s panTro4.chr17 217605 2 + 82630442 GA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 222812 2 - 81552678 GA i nomLeu3.chr19 C 0 T 56 s macFas5.chr16 139516 2 + 80997621 CA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138226 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126747 2 + 75148670 CA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e ponAbe2.chr17 104912 224 + 73212453 T a score=33131.000000 s hg38.chr17_GL383563v3_alt 241695 26 + 375691 GACCCCAGCGAGGGCGACGTCAGGGA s panTro4.chr17 217607 26 + 82630442 GACCCCAGCGAGGGCGACGTCGGGGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 222758 26 - 81552678 GACCCCAGCGAGGGCGACGTCAGGGA i nomLeu3.chr19 T 56 C 0 s macFas5.chr16 139518 26 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138228 26 + 74645514 GACCCCGTTGAGGGTGGCGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126749 26 + 75148670 GACCCCAGCGAGGGCGACGTCAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e ponAbe2.chr17 104912 224 + 73212453 T a score=45994.000000 s hg38.chr17_GL383563v3_alt 241721 30 + 375691 GAGACCCCAGCGAGGGTGACGTCAGGGAGA s panTro4.chr17 217633 30 + 82630442 GAGACCCCAACGAGGGCGACTTCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104688 30 + 73212453 GAGACCCCAGCAAGGGCGACGTCAGGGAGA i ponAbe2.chr17 T 224 C 0 s nomLeu3.chr19 222784 30 - 81552678 GAGACCCCGGGGAGGGCGATATCAGGGAGA i nomLeu3.chr19 C 0 T 28 s macFas5.chr16 139544 30 + 80997621 CAGACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138254 30 + 74645514 CAGACCCCGGCGAGGGCGGCGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126775 30 + 75148670 GAGACCCCAGCGAGGGTGACGTCAGGGACA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=34205.000000 s hg38.chr17_GL383563v3_alt 241751 25 + 375691 GACCCCAGCGAGGGCGACGTCAGGG s panTro4.chr17 217663 25 + 82630442 GACTCCAGTGAGGGCGACGTCGGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104718 25 + 73212453 GTCTCCAGCAAAGGCGACTTCAGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222786 25 - 81552678 GACCCCGGGGAGGGCGATATCAGGG i nomLeu3.chr19 T 28 T 172 s macFas5.chr16 139574 25 + 80997621 GACCCCGGCGAGGGCGACGTCACGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138284 25 + 74645514 CACCCCGGCGAGGGCATTGTCAGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126805 25 + 75148670 GACCCCAGCGAGGGTGACGTCAGGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=1911.000000 s hg38.chr17_GL383563v3_alt 241776 1 + 375691 A s panTro4.chr17 217688 1 + 82630442 A i panTro4.chr17 C 0 T 308 s ponAbe2.chr17 104743 1 + 73212453 A i ponAbe2.chr17 C 0 T 56 s nomLeu3.chr19 222639 1 - 81552678 A i nomLeu3.chr19 T 172 C 0 s macFas5.chr16 139599 1 + 80997621 A i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138309 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126830 1 + 75148670 A i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=865.000000 s hg38.chr17_GL383563v3_alt 241777 2 + 375691 GA s ponAbe2.chr17 104688 2 + 73212453 GA i ponAbe2.chr17 T 56 C 0 s nomLeu3.chr19 222640 1 - 81552678 -A i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139600 2 + 80997621 GA i macFas5.chr16 C 0 T 28 s papAnu2.chr16 138310 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126831 2 + 75148670 CA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e panTro4.chr17 217689 308 + 82630442 T a score=21729.000000 s hg38.chr17_GL383563v3_alt 241779 26 + 375691 GACCCCAGCGAGAGTGACGTCAGGGA s ponAbe2.chr17 104690 26 + 73212453 GACCCCAGCAAGGGCGACGTCAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222641 25 - 81552678 AGACCCAGCATCAGCGG-GCCAGTGG i nomLeu3.chr19 C 0 I 2 s macFas5.chr16 139574 26 + 80997621 GACCCCGGCGAGGGCGACGTCACGGA i macFas5.chr16 T 28 C 0 s papAnu2.chr16 138312 26 + 74645514 CACCCCGGCGAGGGTGACGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126833 26 + 75148670 GACCCCAGCGAGGGCGACGTCAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e panTro4.chr17 217689 308 + 82630442 T a score=1740.000000 s hg38.chr17_GL383563v3_alt 241805 2 + 375691 GA s panTro4.chr17 217381 2 + 82630442 GA i panTro4.chr17 T 308 C 0 s ponAbe2.chr17 104716 2 + 73212453 GA i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 139600 2 + 80997621 GA i macFas5.chr16 C 0 T 144 s papAnu2.chr16 138338 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126859 2 + 75148670 GA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e nomLeu3.chr19 222666 2 - 81552678 I a score=12135.000000 s hg38.chr17_GL383563v3_alt 241807 25 + 375691 GACCCCAGCGAGGGCTACGTCAGGG s panTro4.chr17 217383 25 + 82630442 GATCCCAGCAAGGGCAACATCAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104718 25 + 73212453 GTCTCCAGCAAAGGCGACTTCAGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222668 3 - 81552678 ----------------------AGG i nomLeu3.chr19 I 2 C 0 s papAnu2.chr16 138340 25 + 74645514 CACCCCATTGAGGGTGGCGTCAGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126861 25 + 75148670 GACCCCAGCGAGGGCTATGTCAGGG i chlSab2.chr16 C 0 T 140 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 144 + 80997621 T a score=29312.000000 s hg38.chr17_GL383563v3_alt 241832 27 + 375691 TGAGACCCCAGCGAGGGCGACGTCAGG s panTro4.chr17 217408 27 + 82630442 TGAGACCCCAGCAAGGGCTACGTCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104743 27 + 73212453 AGAGTCTCCAGCAAGGGCGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222671 27 - 81552678 TGAGACCCCAGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 138365 27 + 74645514 ACAGACCCTGGCGAGGGCGGCGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126746 27 + 75148670 ACAGACCCCAGCGAGGGCGACGTCAGG i chlSab2.chr16 T 140 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 144 + 80997621 T a score=176478.000000 s hg38.chr17_GL383563v3_alt 241859 116 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGGGAGAGACCCCAGCGAGAGTGACGTCAGGGAGAGACCCCAGCGAGAGTGACGTCAGGGAGAGACCCCAGCGAGGGCGACGTCAGGGAGA s panTro4.chr17 217435 116 + 82630442 GTGAGACCCCAGCAAGGGTGACTTCAGGGTGAGACCCCAGCGAGGGCGACGTCAGGAAGAGACCCCAGGAAGGATGACTTCGGGGAGAGACCTCAGCAAGGGCGACGTCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104770 116 + 73212453 GAGAGTCCCCAGCAAGGGCGACGTCAGGGAGAGTCCCCAGCAAGGGCGACGTCAGGGAGAGTCCCCAGCAAGGGTGACGTCAGGGAGAGTCCCCAGCAAGGGTGACGTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222698 116 - 81552678 GAGAGACCCCGGCGAGGGTGACGTCAGGGAGAGACCCCGGCGAGGGTGACGTCAGGGAGAGACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCGGGGAGGGCGATATCAGGGAGA i nomLeu3.chr19 C 0 T 28 s macFas5.chr16 139458 116 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 T 144 C 0 s papAnu2.chr16 138392 116 + 74645514 GACACACCCCGTTGAGGGTGGCGTCAGGGACACACCCCGGCGAGGGTGACGTCAGGGACACACCCCGTTGAGGGTGGCGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126773 116 + 75148670 GAGAGACCCCAGCGAGGGTGACGTCAGGGACAGACCCCAGCGAGGGTGACGTCAGGGACAGACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCAGCGAGGGCTATGTCAGGGAGA i chlSab2.chr16 C 0 T 112 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=41484.000000 s hg38.chr17_GL383563v3_alt 241975 28 + 375691 GACCCCAGCGAGGGTGACGTCAGGGAGA s panTro4.chr17 217551 28 + 82630442 GACCCCAGCAAGTGTGACTTCAGGGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104886 28 + 73212453 GTTCCCAGCAAGGGCGACGTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222786 28 - 81552678 GACCCCGGGGAGGGCGATATCAGGGAGA i nomLeu3.chr19 T 28 T 84 s macFas5.chr16 139574 28 + 80997621 GACCCCGGCGAGGGCGACGTCACGGAGA i macFas5.chr16 C 0 T 84 s papAnu2.chr16 138508 28 + 74645514 GACCCCGGCGAGGGTGACGTCAGGGAGA i papAnu2.chr16 C 0 T 308 s chlSab2.chr16 126777 28 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGACA i chlSab2.chr16 T 112 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=84313.000000 s hg38.chr17_GL383563v3_alt 242003 52 + 375691 GACCCCAGCGAGGGTGACTTCAGGAAGAGACCCCAGCGAGGGCTACGTCAGG s panTro4.chr17 217579 52 + 82630442 GACCCCAGCGAGGGCGACATCGGGGAGAGACCCCAGCGAGGGCGACGTCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104914 52 + 73212453 GACCCCAGCAAGGGCGACGTCAGGGAGAGTCTCCAGCAAGGGCTACATCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222730 52 - 81552678 GACCCCGGCGAGGGTGACGTCAGGGAGAGACCCCAGCGAGGGCGACGTCAGG i nomLeu3.chr19 T 84 C 0 s macFas5.chr16 139518 52 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGG i macFas5.chr16 T 84 T 112 s papAnu2.chr16 138228 52 + 74645514 GACCCCGTTGAGGGTGGCGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGG i papAnu2.chr16 T 308 C 0 s chlSab2.chr16 126805 52 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGACAGACCCCAGCGAGGGCGACGTCAGG i chlSab2.chr16 C 0 T 196 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=4011.000000 s hg38.chr17_GL383563v3_alt 242055 2 + 375691 GA s panTro4.chr17 217631 2 + 82630442 GA i panTro4.chr17 C 0 T 252 s ponAbe2.chr17 104966 2 + 73212453 GA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222782 2 - 81552678 GA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 2 + 80997621 GA i macFas5.chr16 T 112 C 0 s papAnu2.chr16 138280 2 + 74645514 GA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126661 2 + 75148670 GA i chlSab2.chr16 T 196 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=28567.000000 s hg38.chr17_GL383563v3_alt 242057 28 + 375691 GAGACCCCAGCGAGGGCGACGTCAGGGA s ponAbe2.chr17 104968 28 + 73212453 GAGTCCCCAGCAAGGGCAATGTCAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222784 28 - 81552678 GAGACCCCGGGGAGGGCGATATCAGGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139460 28 + 80997621 GAGACCCCAGCAAGGGCGACGTCAGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138282 28 + 74645514 CACACCCCGGCGAGGGCATTGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126663 28 + 75148670 GAGAACCCAGCGAGGGCTACGTCAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e panTro4.chr17 217633 252 + 82630442 T a score=1761.000000 s hg38.chr17_GL383563v3_alt 242085 2 + 375691 GA s panTro4.chr17 217381 2 + 82630442 GA i panTro4.chr17 T 252 C 0 s ponAbe2.chr17 104996 2 + 73212453 GA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222812 2 - 81552678 GA i nomLeu3.chr19 C 0 T 28 s macFas5.chr16 139488 2 + 80997621 CA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138310 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126691 2 + 75148670 GA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=40556.000000 s hg38.chr17_GL383563v3_alt 242087 28 + 375691 GACCCCAGCGAGGGTGACGTCAGGGAGA s panTro4.chr17 217383 28 + 82630442 GATCCCAGCAAGGGCAACATCAGGGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104998 28 + 73212453 GTCCCCAGCAAGGGCGACGTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222786 28 - 81552678 GACCCCGGGGAGGGCGATATCAGGGAGA i nomLeu3.chr19 T 28 T 148 s macFas5.chr16 139490 28 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138312 28 + 74645514 CACCCCGGCGAGGGTGACGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126693 28 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGACA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=21084.000000 s hg38.chr17_GL383563v3_alt 242115 20 + 375691 GACCCCAGCAAGGGCTACGT s panTro4.chr17 217411 20 + 82630442 GACCCCAGCAAGGGCTACGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105026 20 + 73212453 GACCCCAGCAAGGGCTACGT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 139518 20 + 80997621 GACCCCGGCGAGGGCGGCGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138340 20 + 74645514 CACCCCATTGAGGGTGGCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126721 20 + 75148670 GACCCCAGCGAGGGCGACGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e nomLeu3.chr19 222814 148 - 81552678 T a score=8136.000000 s hg38.chr17_GL383563v3_alt 242135 6 + 375691 CAGGGT s panTro4.chr17 217431 6 + 82630442 CAGGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105046 6 + 73212453 CAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222666 6 - 81552678 CGAGGT i nomLeu3.chr19 T 148 C 0 s macFas5.chr16 139538 6 + 80997621 CAGGGA i macFas5.chr16 C 0 T 86 s papAnu2.chr16 138360 6 + 74645514 CAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126741 6 + 75148670 CAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=24261.000000 s hg38.chr17_GL383563v3_alt 242141 22 + 375691 GAGACCCCAGCGAGGGCGACGT s panTro4.chr17 217437 22 + 82630442 GAGACCCCAGCAAGGGTGACTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105052 22 + 73212453 GAGTCCCCAGCAAGGGCGACGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222672 22 - 81552678 GAGACCCCAGCGAGGGTGACGT i nomLeu3.chr19 C 0 T 28 s papAnu2.chr16 138366 22 + 74645514 CAGACCCTGGCGAGGGCGGCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126747 22 + 75148670 CAGACCCCAGCGAGGGCGACGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139544 86 + 80997621 T a score=4600.000000 s hg38.chr17_GL383563v3_alt 242163 4 + 375691 CAGG s panTro4.chr17 217459 4 + 82630442 CAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105074 4 + 73212453 CAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222666 4 - 81552678 CGAG i nomLeu3.chr19 T 28 C 0 s papAnu2.chr16 138388 4 + 74645514 CAGG i papAnu2.chr16 C 0 T 308 s chlSab2.chr16 126769 4 + 75148670 CAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139544 86 + 80997621 T a score=48144.000000 s hg38.chr17_GL383563v3_alt 242167 28 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGG s panTro4.chr17 217463 28 + 82630442 GTGAGACCCCAGCGAGGGCGACGTCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105078 28 + 73212453 GAGAGTCCCCAGCAAGGGCGACTTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222670 28 - 81552678 GTGAGACCCCAGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 28 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGG i macFas5.chr16 T 86 T 28 s papAnu2.chr16 138084 28 + 74645514 GAGAGACTCCGGCGAGGGCGACGTCAGG i papAnu2.chr16 T 308 C 0 s chlSab2.chr16 126773 28 + 75148670 GAGAGACCCCAGCGAGGGTGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=85125.000000 s hg38.chr17_GL383563v3_alt 242195 56 + 375691 GAGAGACCCCAGCGAGAGTGACGTCAGGGAGAGACCCCAGCGAGAGTGACGTCAGG s panTro4.chr17 217491 56 + 82630442 AAGAGACCCCAGGAAGGATGACTTCGGGGAGAGACCTCAGCAAGGGCGACGTCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105106 56 + 73212453 GAGAGTCCCCAGCAAGGGCGACTTCAGGGAGAGTCTCCAGCAAGGGCGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222698 56 - 81552678 GAGAGACCCCGGCGAGGGTGACGTCAGGGAGAGACCCCGGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 56 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGG i macFas5.chr16 T 28 T 56 s papAnu2.chr16 138112 56 + 74645514 GAGAGACCCCGGCGAGGGCGGCGTCAGGGACACACCCCGGGGAGGGCGGCGTCAGG i papAnu2.chr16 C 0 T 84 s chlSab2.chr16 126801 56 + 75148670 GACAGACCCCAGCGAGGGTGACGTCAGGGACAGACCCCAGCGAGGGCGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=52851.000000 s hg38.chr17_GL383563v3_alt 242251 32 + 375691 GAGAGACCCCAGCGAGGGCGACGTCAGGGAGA s panTro4.chr17 217547 32 + 82630442 GAGAGACCCCAGCAAGTGTGACTTCAGGGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105162 32 + 73212453 GAGAGTCCCCAGCAAGGGCGACGTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222754 32 - 81552678 GAGAGACCCCAGCGAGGGCGACGTCAGGGAGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 32 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGGACA i macFas5.chr16 T 56 C 0 s papAnu2.chr16 138084 32 + 74645514 GAGAGACTCCGGCGAGGGCGACGTCAGGGAGA i papAnu2.chr16 T 84 C 0 s chlSab2.chr16 126857 32 + 75148670 GAGAGACCCCAGCGAGGGCTATGTCAGGGAGA i chlSab2.chr16 C 0 T 140 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=43809.000000 s hg38.chr17_GL383563v3_alt 242283 28 + 375691 GACCCCAGCGAGGGCGACGTCAGGGAGA s panTro4.chr17 217579 28 + 82630442 GACCCCAGCGAGGGCGACATCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105194 28 + 73212453 GTCCCCAGCAAGGGAGACTTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222786 28 - 81552678 GACCCCGGGGAGGGCGATATCAGGGAGA i nomLeu3.chr19 C 0 T 28 s macFas5.chr16 139490 28 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138116 28 + 74645514 GACCCCGGCGAGGGCGGCGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126749 28 + 75148670 GACCCCAGCGAGGGCGACGTCAGGGAGA i chlSab2.chr16 T 140 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=41328.000000 s hg38.chr17_GL383563v3_alt 242311 28 + 375691 GACCCCAGCGAGGGTGACGTCAGGGAGA s panTro4.chr17 217607 28 + 82630442 GACCCCAGCGAGGGCGACGTCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105222 28 + 73212453 GTCCCCAGCAAGGGCAACATCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222786 28 - 81552678 GACCCCGGGGAGGGCGATATCAGGGAGA i nomLeu3.chr19 T 28 T 56 s macFas5.chr16 139518 28 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138144 28 + 74645514 CACCCCGGGGAGGGCGGCGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126777 28 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGACA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=55498.000000 s hg38.chr17_GL383563v3_alt 242339 38 + 375691 GACCCCAGCGAGGGTGACTTCAGGAAGAGACCCCAGCG s panTro4.chr17 217635 38 + 82630442 GACCCCAACGAGGGCGACTTCGGGGAGAGACTCCAGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105250 38 + 73212453 GTCCCCAGCAAGGGAGACTTCAGGGAGAGTCCCCAGCA i ponAbe2.chr17 C 0 T 560 s nomLeu3.chr19 222758 38 - 81552678 GACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCGGGG i nomLeu3.chr19 T 56 C 0 s macFas5.chr16 139546 38 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCGGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138172 38 + 74645514 GACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCGTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126805 38 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGACAGACCCCAGCG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=24410.000000 s hg38.chr17_GL383563v3_alt 242377 15 + 375691 AGGGCGACGTCAGGG s panTro4.chr17 217673 15 + 82630442 AGGGCGACGTCGGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104728 15 + 73212453 AAGGCGACTTCAGGG i ponAbe2.chr17 T 560 C 0 s nomLeu3.chr19 222796 15 - 81552678 AGGGCGATATCAGGG i nomLeu3.chr19 C 0 T 172 s macFas5.chr16 139584 15 + 80997621 AGGGCGACGTCACGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138210 15 + 74645514 AGGGCGGCGTCAGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126843 15 + 75148670 AGGGCGACGTCAGGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=1911.000000 s hg38.chr17_GL383563v3_alt 242392 1 + 375691 A s panTro4.chr17 217688 1 + 82630442 A i panTro4.chr17 C 0 T 308 s ponAbe2.chr17 104743 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222639 1 - 81552678 A i nomLeu3.chr19 T 172 C 0 s macFas5.chr16 139599 1 + 80997621 A i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138225 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126858 1 + 75148670 A i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=1315.000000 s hg38.chr17_GL383563v3_alt 242393 2 + 375691 GA s ponAbe2.chr17 104744 2 + 73212453 GA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222640 1 - 81552678 -A i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139600 2 + 80997621 GA i macFas5.chr16 C 0 T 144 s papAnu2.chr16 138226 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126859 2 + 75148670 GA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e panTro4.chr17 217689 308 + 82630442 T a score=10320.000000 s hg38.chr17_GL383563v3_alt 242395 26 + 375691 GACCCCAGCGAGAGTGACGTCAGGGA s ponAbe2.chr17 104746 26 + 73212453 GTCTCCAGCAAGGGCGACGTCAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222641 25 - 81552678 AGACCCAGCATCAGCGG-GCCAGTGG i nomLeu3.chr19 C 0 I 2 s papAnu2.chr16 138228 26 + 74645514 GACCCCGTTGAGGGTGGCGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126861 26 + 75148670 GACCCCAGCGAGGGCTATGTCAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 144 + 80997621 T e panTro4.chr17 217689 308 + 82630442 T a score=1010.000000 s hg38.chr17_GL383563v3_alt 242421 2 + 375691 GA s panTro4.chr17 217381 2 + 82630442 GA i panTro4.chr17 T 308 C 0 s ponAbe2.chr17 104772 2 + 73212453 GA i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 138254 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126887 2 + 75148670 GA i chlSab2.chr16 C 0 T 226 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 144 + 80997621 T e nomLeu3.chr19 222666 2 - 81552678 I a score=8845.000000 s hg38.chr17_GL383563v3_alt 242423 26 + 375691 GACCCCAGCAAGGGCTACGTCAGGGT s panTro4.chr17 217383 26 + 82630442 GATCCCAGCAAGGGCAACATCAGGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104774 26 + 73212453 GTCCCCAGCAAGGGCGACGTCAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222668 4 - 81552678 ----------------------AGGT i nomLeu3.chr19 I 2 C 0 s papAnu2.chr16 138256 26 + 74645514 GACCCCGGCGAGGGCGGCGTCAGGGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 126889 226 + 75148670 T e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 144 + 80997621 T a score=27486.000000 s hg38.chr17_GL383563v3_alt 242449 26 + 375691 GAGACCCCAGCGAGGGCGACGTCAGG s panTro4.chr17 217409 26 + 82630442 GAGACCCCAGCAAGGGCTACGTCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104800 26 + 73212453 GAGTCCCCAGCAAGGGCGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222672 26 - 81552678 GAGACCCCAGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 138282 26 + 74645514 CACACCCCGGCGAGGGCATTGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126663 26 + 75148670 GAGAACCCAGCGAGGGCTACGTCAGG i chlSab2.chr16 T 226 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 144 + 80997621 T a score=49105.000000 s hg38.chr17_GL383563v3_alt 242475 29 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGGG s panTro4.chr17 217435 29 + 82630442 GTGAGACCCCAGCAAGGGTGACTTCAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104826 29 + 73212453 GAGAGTCCCCAGCAAGGGTGACGTCAGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222698 29 - 81552678 GAGAGACCCCGGCGAGGGTGACGTCAGGG i nomLeu3.chr19 C 0 T 88 s macFas5.chr16 139458 29 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGG i macFas5.chr16 T 144 C 0 s papAnu2.chr16 138308 29 + 74645514 GACACACCCCGGCGAGGGTGACGTCAGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126689 29 + 75148670 GAGAGACCCCAGCGAGGGTGACGTCAGGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=28312.000000 s hg38.chr17_GL383563v3_alt 242504 27 + 375691 AGAGACCCCAGCGAGAGTGACGTCAGG s panTro4.chr17 217464 27 + 82630442 TGAGACCCCAGCGAGGGCGACGTCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104855 27 + 73212453 AGAGTCCCCAGCAAGGGTGACGTCAGG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 139487 27 + 80997621 ACAGACCCCGGCGAGGGCGGCGTCAGG i macFas5.chr16 C 0 T 56 s papAnu2.chr16 138337 27 + 74645514 ACACACCCCATTGAGGGTGGCGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126718 27 + 75148670 ACAGACCCCAGCGAGGGCGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e nomLeu3.chr19 222727 88 - 81552678 T a score=845.000000 s hg38.chr17_GL383563v3_alt 242531 1 + 375691 G s panTro4.chr17 217491 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104882 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 139458 1 + 80997621 G i macFas5.chr16 T 56 C 0 s papAnu2.chr16 138364 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126745 1 + 75148670 G i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e nomLeu3.chr19 222727 88 - 81552678 T a score=28080.000000 s hg38.chr17_GL383563v3_alt 242532 27 + 375691 AGAGACCC-----CAGCGAGAGTGACGTCAGG s panTro4.chr17 217492 27 + 82630442 AGAGACCC-----CAGGAAGGATGACTTCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104883 27 + 73212453 AGAGTTCC-----CAGCAAGGGCGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222639 31 - 81552678 AAAGACCCAGCATCAGCG-GGCCAGTGGCGAG i nomLeu3.chr19 T 88 C 0 s macFas5.chr16 139459 27 + 80997621 AGAGACCC-----CAGCAAGGGCGACGTCAGG i macFas5.chr16 C 0 T 28 s papAnu2.chr16 138365 27 + 74645514 ACAGACCC-----TGGCGAGGGCGGCGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126746 27 + 75148670 ACAGACCC-----CAGCGAGGGCGACGTCAGG i chlSab2.chr16 C 0 T 112 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=42486.000000 s hg38.chr17_GL383563v3_alt 242559 28 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGG s panTro4.chr17 217519 28 + 82630442 GAGAGACCTCAGCAAGGGCGACGTCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104910 28 + 73212453 GAGAGACCCCAGCAAGGGCGACGTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222670 28 - 81552678 GTGAGACCCCAGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 28 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGG i macFas5.chr16 T 28 T 28 s papAnu2.chr16 138392 28 + 74645514 GACACACCCCGTTGAGGGTGGCGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126661 28 + 75148670 GAGAGAACCCAGCGAGGGCTACGTCAGG i chlSab2.chr16 T 112 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=43792.000000 s hg38.chr17_GL383563v3_alt 242587 28 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGG s panTro4.chr17 217547 28 + 82630442 GAGAGACCCCAGCAAGTGTGACTTCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104938 28 + 73212453 GAGAGTCTCCAGCAAGGGCTACATCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222698 28 - 81552678 GAGAGACCCCGGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 28 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGG i macFas5.chr16 T 28 T 28 s papAnu2.chr16 138420 28 + 74645514 GACACACCCCGGCGAGGGTGACGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126689 28 + 75148670 GAGAGACCCCAGCGAGGGTGACGTCAGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=42413.000000 s hg38.chr17_GL383563v3_alt 242615 29 + 375691 GAGAGACCCCAGCGAGGGTGACGTCAGGA s panTro4.chr17 217575 29 + 82630442 GTGAGACCCCAGCGAGGGCGACATCGGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104966 29 + 73212453 GAGAGTCCCCAGCAAGGGCAATGTCAGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222726 29 - 81552678 GAGAGACCCCGGCGAGGGTGACGTCAGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 29 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGG i macFas5.chr16 T 28 C 0 s papAnu2.chr16 138448 29 + 74645514 GACACACCCCGTTGAGGGTGGCGTCAGGG i papAnu2.chr16 C 0 T 392 s chlSab2.chr16 126717 29 + 75148670 GACAGACCCCAGCGAGGGCGACGTCAGGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=97028.000000 s hg38.chr17_GL383563v3_alt 242644 59 + 375691 AGAGACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCAGCGAGGGTGACGTCAGGGAGA s panTro4.chr17 217604 59 + 82630442 AGAGACCCCAGCGAGGGCGACGTCGGGGAGAGACCCCAACGAGGGCGACTTCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 104995 59 + 73212453 AGAGTCCCCAGCAAGGGCGACGTCAGGGAGAGACCCCAGCAAGGGCTACGTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222755 59 - 81552678 AGAGACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCGGGGAGGGCGATATCAGGGAGA i nomLeu3.chr19 C 0 T 84 s macFas5.chr16 139487 59 + 80997621 ACAGACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138085 59 + 74645514 AGAGACTCCGGCGAGGGCGACGTCAGGGAGAGACCCCGGCGAGGGCGGCGTCAGGGACA i papAnu2.chr16 T 392 C 0 s chlSab2.chr16 126746 59 + 75148670 ACAGACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCAGCGAGGGTGACGTCAGGGACA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=42098.000000 s hg38.chr17_GL383563v3_alt 242703 26 + 375691 GACCCCAGCGAGGGTGACGTCAGGGA s panTro4.chr17 217663 26 + 82630442 GACTCCAGTGAGGGCGACGTCGGGGA i panTro4.chr17 C 0 T 308 s ponAbe2.chr17 105054 26 + 73212453 GTCCCCAGCAAGGGCGACGTCAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222730 26 - 81552678 GACCCCGGCGAGGGTGACGTCAGGGA i nomLeu3.chr19 T 84 C 0 s macFas5.chr16 139546 26 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138144 26 + 74645514 CACCCCGGGGAGGGCGGCGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126805 26 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=32743.000000 s hg38.chr17_GL383563v3_alt 242729 28 + 375691 GAGACCCCAGCGAGGGCGACGTCAGGAA s ponAbe2.chr17 105080 28 + 73212453 GAGTCCCCAGCAAGGGCGACTTCAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222756 28 - 81552678 GAGACCCCAGCGAGGGCGACGTCAGGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139572 28 + 80997621 CAGACCCCGGCGAGGGCGACGTCACGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138170 28 + 74645514 CAGACCCCGGCGAGGGCGGCGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126831 28 + 75148670 CAGACCCCAGCGAGGGCGACGTCAGGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e panTro4.chr17 217689 308 + 82630442 T a score=2661.000000 s hg38.chr17_GL383563v3_alt 242757 2 + 375691 GA s panTro4.chr17 217381 2 + 82630442 GA i panTro4.chr17 T 308 C 0 s ponAbe2.chr17 105108 2 + 73212453 GA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222784 2 - 81552678 GA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139600 2 + 80997621 GA i macFas5.chr16 C 0 T 143 s papAnu2.chr16 138198 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126859 2 + 75148670 GA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=15638.000000 s hg38.chr17_GL383563v3_alt 242759 15 + 375691 GACCCCAGCGAGGGC s panTro4.chr17 217383 15 + 82630442 GATCCCAGCAAGGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105110 15 + 73212453 GTCCCCAGCAAGGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222786 15 - 81552678 GACCCCGGGGAGGGC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 138200 15 + 74645514 GACCCCGTTGAGGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126861 15 + 75148670 GACCCCAGCGAGGGC i chlSab2.chr16 C 0 T 28 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 143 + 80997621 T a score=9708.000000 s hg38.chr17_GL383563v3_alt 242774 10 + 375691 AACATCAGGA s panTro4.chr17 217398 10 + 82630442 AACATCAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105125 10 + 73212453 GACTTCAGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222801 10 - 81552678 GATATCAGGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 138215 10 + 74645514 GGCGTCAGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126848 10 + 75148670 GACGTCAGGG i chlSab2.chr16 T 28 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e macFas5.chr16 139602 143 + 80997621 T a score=3288.000000 s hg38.chr17_GL383563v3_alt 242784 3 + 375691 AGA s panTro4.chr17 217408 3 + 82630442 TGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105135 3 + 73212453 AGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222811 3 - 81552678 AGA i nomLeu3.chr19 C 0 T 148 s macFas5.chr16 139459 3 + 80997621 AGA i macFas5.chr16 T 143 C 0 s papAnu2.chr16 138225 3 + 74645514 ACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126858 3 + 75148670 AGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=20418.000000 s hg38.chr17_GL383563v3_alt 242787 20 + 375691 GACCCCAGCGAGGGCGACGT s panTro4.chr17 217411 20 + 82630442 GACCCCAGCAAGGGCTACGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105138 20 + 73212453 GTCTCCAGCAAGGGCGACGT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 139462 20 + 80997621 GACCCCAGCAAGGGCGACGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138228 20 + 74645514 GACCCCGTTGAGGGTGGCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126861 20 + 75148670 GACCCCAGCGAGGGCTATGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I e nomLeu3.chr19 222814 148 - 81552678 T a score=10325.000000 s hg38.chr17_GL383563v3_alt 242807 8 + 375691 CAGGGAGA s panTro4.chr17 217431 8 + 82630442 CAGGGTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105158 8 + 73212453 CAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222666 8 - 81552678 CGAGGTGA i nomLeu3.chr19 T 148 C 0 s macFas5.chr16 139482 8 + 80997621 CAGGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138248 8 + 74645514 CAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126881 8 + 75148670 CAGGGAGA i chlSab2.chr16 C 0 T 84 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=82678.000000 s hg38.chr17_GL383563v3_alt 242815 52 + 375691 GACCCCAGCGAGGGTGACGTCAGGGAGAGACCCCAGCGAGGGTGACGTCAGG s panTro4.chr17 217439 52 + 82630442 GACCCCAGCAAGGGTGACTTCAGGGTGAGACCCCAGCGAGGGCGACGTCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105166 52 + 73212453 GTCCCCAGCAAGGGCGACGTCAGGGAGAGTCCCCAGCAAGGGAGACTTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222674 52 - 81552678 GACCCCAGCGAGGGTGACGTCAGGGAGAGACCCCGGCGAGGGTGACGTCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139490 52 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGG i macFas5.chr16 C 0 T 84 s papAnu2.chr16 138256 52 + 74645514 GACCCCGGCGAGGGCGGCGTCAGGGACACACCCCGGCGAGGGCATTGTCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126805 52 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGACAGACCCCAGCGAGGGCGACGTCAGG i chlSab2.chr16 T 84 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=45744.000000 s hg38.chr17_GL383563v3_alt 242867 32 + 375691 GAGAGACCCCAGCAAGGGTGATGTCAGGGAGA s panTro4.chr17 217491 32 + 82630442 AAGAGACCCCAGGAAGGATGACTTCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105218 32 + 73212453 GAGAGTCCCCAGCAAGGGCAACATCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222726 32 - 81552678 GAGAGACCCCGGCGAGGGTGACGTCAGGGAGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 32 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGGACA i macFas5.chr16 T 84 C 0 s papAnu2.chr16 138308 32 + 74645514 GACACACCCCGGCGAGGGTGACGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126857 32 + 75148670 GAGAGACCCCAGCGAGGGCTATGTCAGGGAGA i chlSab2.chr16 C 0 T 112 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=51385.000000 s hg38.chr17_GL383563v3_alt 242899 35 + 375691 GACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCT s panTro4.chr17 217523 35 + 82630442 GACCTCAGCAAGGGCGACGTCGGGGAGAGACCCCA i panTro4.chr17 C 0 T 28 s ponAbe2.chr17 105250 35 + 73212453 GTCCCCAGCAAGGGAGACTTCAGGGAGAGTCCCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222758 35 - 81552678 GACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139490 35 + 80997621 GACCCCGGCGAGGGCGGCGTCAGGGACAGACCCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138340 35 + 74645514 CACCCCATTGAGGGTGGCGTCAGGGACAGACCCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126777 35 + 75148670 GACCCCAGCGAGGGTGACGTCAGGGACAGACCCCA i chlSab2.chr16 T 112 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=25341.000000 s hg38.chr17_GL383563v3_alt 242934 16 + 375691 GCGAGGGTGACGTCAG s panTro4.chr17 217530 16 + 82630442 GCAAGGGCGACGTCGG i panTro4.chr17 T 28 C 0 s ponAbe2.chr17 105285 16 + 73212453 GCAAGGGCGACGTCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222793 16 - 81552678 GGGAGGGCGATATCAG i nomLeu3.chr19 C 0 T 140 s macFas5.chr16 139525 16 + 80997621 GCGAGGGCGGCGTCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138375 16 + 74645514 GCGAGGGCGGCGTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126812 16 + 75148670 GCGAGGGTGACGTCAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=2100.000000 s hg38.chr17_GL383563v3_alt 242950 1 + 375691 G s panTro4.chr17 217546 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105301 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222669 1 - 81552678 G i nomLeu3.chr19 T 140 C 0 s macFas5.chr16 139541 1 + 80997621 G i macFas5.chr16 C 0 T 84 s papAnu2.chr16 138391 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126828 1 + 75148670 G i chlSab2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=89790.000000 s hg38.chr17_GL383563v3_alt 242951 60 + 375691 GAGAGACCCCAGCAAGGGTGACGTCAGGGAGAGACCCCAGCGAGGGCGACGTCAGGGAGA s panTro4.chr17 217547 60 + 82630442 GAGAGACCCCAGCAAGTGTGACTTCAGGGTGAGACCCCAGCGAGGGCGACATCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105302 60 + 73212453 GAGAGACCCCAGCAAGGGTGACTTCAGGGAGAGTCTCCAGCAAGGGCTACGTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222670 60 - 81552678 GTGAGACCCCAGCGAGGGTGACGTCAGGGAGAGACCCCGGCGAGGGTGACGTCAGGGAGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139458 60 + 80997621 GAGAGACCCCAGCAAGGGCGACGTCAGGGACAGACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 T 84 C 0 s papAnu2.chr16 138392 60 + 74645514 GACACACCCCGTTGAGGGTGGCGTCAGGGACACACCCCGGCGAGGGTGACGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126829 60 + 75148670 GACAGACCCCAGCGAGGGCGACGTCAGGGAGAGACCCCAGCGAGGGCTATGTCAGGGAGA i chlSab2.chr16 C 0 T 42 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=13892.000000 s hg38.chr17_GL383563v3_alt 243011 14 + 375691 GACCCCAGCAAGGG s panTro4.chr17 217607 14 + 82630442 GACCCCAGCGAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105362 14 + 73212453 GTCTCCAGCAAGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222730 14 - 81552678 GACCCCGGCGAGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139518 14 + 80997621 GACCCCGGCGAGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138452 14 + 74645514 CACCCCGTTGAGGG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 126889 42 + 75148670 T e rheMac3.chr16 134101 1 + 80904711 I a score=2515.000000 s hg38.chr17_GL383563v3_alt 243025 3 + 375691 TGA s panTro4.chr17 217621 3 + 82630442 CGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105376 3 + 73212453 CAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222744 3 - 81552678 TGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139532 3 + 80997621 CGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138466 3 + 74645514 TGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126847 3 + 75148670 CGA i chlSab2.chr16 T 42 C 0 e mm10.chr11 75870371 154 + 122082543 I e canFam3.chr9 15698280 0 - 61074082 C e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=17231.000000 s hg38.chr17_GL383563v3_alt 243028 9 + 375691 CTTCAGGGT s panTro4.chr17 217624 9 + 82630442 CGTCGGGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105379 9 + 73212453 CGTCAGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222747 9 - 81552678 CGTCAGGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 139535 9 + 80997621 CGTCAGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138469 9 + 74645514 CGTCAGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126850 9 + 75148670 CGTCAGGGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15698280 9 - 61074082 CATCAGTGT i canFam3.chr9 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I e rheMac3.chr16 134101 1 + 80904711 I a score=66286.000000 s hg38.chr17_GL383563v3_alt 243037 30 + 375691 GAGACCCCAGCGAGGGCGACGTCGGGGAGA s panTro4.chr17 217633 30 + 82630442 GAGACCCCAACGAGGGCGACTTCGGGGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105388 30 + 73212453 GAGACCCCAGCAAGGGCTACGTCAGGGAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222756 30 - 81552678 GAGACCCCAGCGAGGGCGACGTCAGGGAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 134102 30 + 80904711 GAGACCCCGGCGAGGGCGGCGTCAGGGACA i rheMac3.chr16 I 1 C 0 s macFas5.chr16 139544 30 + 80997621 CAGACCCCGGCGAGGGCGGCGTCAGGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138478 30 + 74645514 CAGACCCCGGCGAGGGCGGCGTCAGGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126859 30 + 75148670 GAGACCCCAGCGAGGGCTATGTCAGGGAGA i chlSab2.chr16 C 0 T 1 s canFam3.chr9 15698289 17 - 61074082 AGGACCCCAGCCAGGGC------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=35416.000000 s hg38.chr17_GL383563v3_alt 243067 27 + 375691 GACCCCTGCGAGGGCGACGTCGGGGAT------- s panTro4.chr17 217663 27 + 82630442 GACTCCAGTGAGGGCGACGTCGGGGAT------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105418 27 + 73212453 GTCCCCAGCAAGGGCTACGTCAGGGAT------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222786 27 - 81552678 GACCCCGGGGAGGGCGATATCAGGGAG------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 134132 27 + 80904711 GACCCCGGCGAGGGCGACGTCAGGGAG------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 139574 27 + 80997621 GACCCCGGCGAGGGCGACGTCACGGAG------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138508 27 + 74645514 GACCCCGGCGAGGGTGACGTCAGGGAG------- i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15698306 31 - 61074082 --CAGCTGCGATGA-GACTTTGGGGGAAAATCAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 126889 1 + 75148670 T a score=46297.000000 s hg38.chr17_GL383563v3_alt 243094 15 + 375691 ATCCAAAGTGCCCCA s panTro4.chr17 217690 15 + 82630442 ATCCAAAGTGCCCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105445 15 + 73212453 ATCCAAAGTGCCCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222813 15 - 81552678 ATCCAAAGTGCCCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 134159 15 + 80904711 ATCCAAAGTGCCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 139601 15 + 80997621 ATCCAAAGTGCCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138535 15 + 74645514 ATCCAAAGTGCCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126888 15 + 75148670 ATCCAAAGTGCCCCG i chlSab2.chr16 T 1 C 0 s canFam3.chr9 15698337 15 - 61074082 ATCAAAAGCGCCCTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75870371 154 + 122082543 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=1205907.000000 s hg38.chr17_GL383563v3_alt 243109 482 + 375691 CAGGGAAAAGATTCTGAAGAGATCGGAACACGAAA---------TT-TCTTTGCAAATTTCTCTTTCAATCCACAAACTTTTCCCGAGCACCTTT-ATATACAACACACTGCAGGAG---ACACTGAGTGCTGGCTGTGGCCCGT------------GGCTGCC----------------------------------------------------------------GGGTTATAATCAGGA---TGTGGCGGGAAATTGAGGAGGCAAAGCCAATGCTGAACAGAGAAGAACACGCTAATTGTCTTAACCAGCTTTCAGCTCCTTAAAAATTGGTCTTCTTCACCCCTTTCTAGGCCACCCCCCCTCAGATAACA---TCTGTGTCCTCCAAG----------------------------------------AAGCTTTCTTATGGCCCAGGTACGTT----------------------------------------------TGAGACGC--------------------------------TGCAGGAA---------TGGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTAGATTCCAGTGAACTTTTCTACTGATTACAGCATCACTTTGAGTGAGT--CA-------------TTCTTCGTTTTCG---TTTAGTGGATAGGGATTCGAGGCTAAACAGTAAATGAAATGAATTTCTGGTTT s panTro4.chr17 217705 482 + 82630442 CAGGGAAAAGATTCTGAAGAGATCAGAACACGAAA---------TT-TCTTTGCAAATTTCTCTTTCAATCCACAAACTTTTCCCGAGCACCTTT-GTATACAACACACTGCAGGAG---ACACTGAGTGCTGGCTGTGGCCCGT------------GGCTGCC----------------------------------------------------------------GGGTTATAATCAGGA---TGTGGCGGGAAATTGAGGAGGCAAAGCCAATGCTGAACAGAGAAGAACACGCTAATTGTCTTAACCAGCTTTCAGCTCCTTAAAAATTGGTCTTCTTCACCCCTTTCTAGGCCACCCCCCCTCAGATAACA---CCTGTGTCCTCCAAG----------------------------------------AAGCTTTCTTATGGCCCAGGTACGTT----------------------------------------------TGAGACGC--------------------------------TGCAGGAA---------TGGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTAGATTCCGGTGAACTTTTCTACTGATTACAGCGTCACTTTGAGTGAGT--CA-------------TTCTTTGTTTTTG---TTTAGTGGATAGGGATTCAAGGCTAAACAGTAAATGAAATGAATTTCTGGTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105460 527 + 73212453 CAGGTAAAAGATTCTGAAGAGATCGGAACACGAAA---------TT-TCTTTGCAAATTTCTCTTTCAATCCAGAAACGTTTCCCGAGCACCTTT-GTATACAACACATTGCAGGAGA-CACACTGAGTGCTGGCTGAGGCCCGC------------GGCTGCCGGGTTCTAATCAGGATGCAGCGGGAAATTGAGGAGGTGAGTGCTGGCTGAGGCCTGCGGCTGCTGGGTTATAATCAGGA---TGCGGCAGGAAATTGAGGAGGCAAAGCCAATGCTGAACAG---AGAACACGCTAATTGTCTTAACCAGCTTTCAGCTCCTTAAAAATTGGTCTTCTT--CCCCTTTCTAGGCCA-CCCCCCTCAGATGACC---CCTGTGTCCTCCAAG----------------------------------------AAGCTTTGTTATAGCCAAGG---------------------------------------------------------------------------------------------GAATGAA---------TAGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTAGATTCCAGTGAACTTTTCTACTGATTACAGCATCACTTTGAGTGAGT--CA-------------TTCTTTGTTTTCG---TTTAATGGATAGGGATTCAAGGCTAAACAGTAAACGAAATGaatttctggttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 222828 480 - 81552678 CGGAGAAAAGATTCTTAAGAGATCGGAACACGAAA---------TT-TCTTTGCAAATTTCTCTCTCAATCCACAAACGTTTCCTGAACACCTTT-GTATACAACACACTGCAGGAGA-CACAGTGAGTGCTGGCTGCTGCCCAC------------GGCTGCC----------------------------------------------------------------GGGTTATAATCAGGA---TGCAGCGGGAAATTGAGGAGGCAAAGCCATTGCTGAACAG---AGAACACGCTAATTGTCTGAACCAGCTTTCAGCTCCTTAAAAATTGGTCTTCTTCACCCCTTTCTAGGCCA-TCCCCCTCAGATGACC---CCCGTGTCCTCCAAG----------------------------------------AAGCTTTCTTATGGCCAAGGTATGTT----------------------------------------------TGAGACGC--------------------------------TGCAGGAA---------TGGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTAGATTCCAGTGAACTTTTCTACTGATTACAGCATCACTTTGAGTGAGT--CA-------------TTCTTTGTTTTCG---TTTAGTGGATAGGGATTCAAGGCTAAACAGTAAATGAAATGAATTTCTGGTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 134174 472 + 80904711 CAGGGAAAAGATT-----------AGAACATGAAA---------TT-TCTTTGCAAATTTCtctttcaatccacaaacatttcccgagtaccttt-gtatacgacacactgcaggaga-cacagtgACTGCCGGCTGCTGCCCGT------------GGCTGCT----------------------------------------------------------------GGGTTCCAACCAGGA---TGCGGCGGGAAACTGAGGAGGCAAAGCCAACACTGAACAGAGAAGAACACGCTAATTGTCTTAACCAGCCTCCAGCTCCTTAAAAATGGGTCTTCTTCACCCCTTTCTAGGCCG-CCCCCCTCAGATGACA---CCCGTGTCCTCCAAG----------------------------------------AAGCTCTCTTATGGCCGAGGTACATT----------------------------------------------TGAGAGGC--------------------------------TGCAGGGA---------TGGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTCGATTCCAACGAACTTCTCTACTGACTGCAGCATAACTTGGAGTGAGT--CA-------------TTCTTTGTTTTCT---TTTAGTGGATAGGGATTCAAGGCTAAACAGTAAACGAAATGAATTTCTGGTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 139616 472 + 80997621 CAGGGAAAAGATT-----------AGAACATGAAA---------TT-TCTTTGCAAATTTCTCTTTCAATCCACAAACATTTCCCGAGTACCTTT-GTATACGACACACTGCAGGAGA-CACAGTGACTGCCGGCTGCTGCCCGC------------GGCTGCT----------------------------------------------------------------GGGTTCCAACCAGGA---TGCGGCGGGAAACTGAGGAGGCAAAGCCAACACCGAACAGAGAAGAACACGCTAATTGTCTTAACCAGCCTCCAGCTCCTTAAAAATGGGTCTTCTTCACCCCTTTCTAGGCCG-CCCCCCTCAGATGACA---CCCGTGTCCTCCAAG----------------------------------------AAGCTCTCTTATGGCCGAGGTACATT----------------------------------------------TGAGAGGC--------------------------------TGCAGGGA---------TGGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTCGATTCCAACGAACTTCTCTACTGATTGCAGCATAACTTGGAGTGAGT--CA-------------TTCTTTGTTTTCT---TTTAGTGGATAGGGATTCAAGGCTAAACAGTAAACGAAATGAATTTCTGGTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 138550 493 + 74645514 CAGGGAAAAGATTCTGAAGAGATCAGAACACGAAA---------TT-TCTTTGCAAATTTCTCTTTCAATCCACAAACATTTCCCGAGTGCCTTT-GTATACGACACACTGCAGGAGA-CACAGTGACTGCCGGCTGCTGCCCGC------------GGCTGCT----------------------------------------------------------------GGGTTCCAACCAGGA---TGCGGCGGGAAACTGAGGAGGCAAAGCCAACACTGAACAGAGAAGAACACGCTAATTGTCTTAACCAGCCTCCAGCTCCTTAAAAATTGGTCTTCTTCACCCCTTTCTAGGCCG-CCCCCCTCAGATGACA---CCCGTGTCCTCCAAGGTACATTT------------------------------GAGAGGTACATCATGGCCGAGGTACATT----------------------------------------------TGAGAGGC--------------------------------TGCAGGGA---------TGGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTCGATTCCAACGAACTTCTCTACTGATTGCAGCATAACTTGGAGTGAgt--ca-------------ttctttgttttct---tttagtggaTAGGGATTCAAGGCTAAACAGTAAACGAAATGAATTTCTGGTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 126903 479 + 75148670 CAGGGAAAAGATTCTGAAGAGATCAGAACACGAAA---------TT-TCTTTGCAAATTTCTCTTTCAATCCACACACATTTCCCGAGTGCCTTT-GTATACGACACACTGCAGGAGA-CACAGTGACTGCC-GCTGCTGCCCGC------------GGCTGCT----------------------------------------------------------------GGGTTACAACCAGGA---TGCGGCGGGAAATTGAGGAGGCAAAGCCAGCACTGAACAGAGAACAACACGCTAATTGTCTTAACCAGCCTCCAGCTCCTTAAAAATTGG---TCTTCACCCCTTTCTAGGCCG-CCCCCCTCAGATGGCA---CCTGTGTCCTCCAAG----------------------------------------AAGCTTTCTTATGGCCGAGGTACATT----------------------------------------------TGAGAGGC--------------------------------TGCAGGGA---------TGGTTTGCAG---------------------------------------------------------AATCCTGGGGAATCTCGATTCCAACGAACTTCTCTACTGATTACAGCATAACTTGGAGTGAGT--CA-------------TTCTTTGTTTTCT---TTTAGTGGATAGGGATTCAAGGCTAAACAGTAAACGAAATGAATTTCTGGTTT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75870525 471 + 122082543 CGGGCAAGAGGTTATGAAATGGTCAGAGCAGGCAC---------TTCTCTTTGCCAATTCCCCTTTGGATCAAAAAGCATTACTTAAACACCTTT-CTGTGCAAACTGCTGCGGGAAGCCGCAGT-ACTGTCAGCGGGTGCAGGC-------------TCTGCC----------------------------------------------------------------TGGGTCTAATCAGGATTGTGTGTGTGAAAGCACAGGAGAC--TGCCA-----GGGTAAAGAAGAGCGCTCTAATTGTATTAATCAGCTTTCAATTACTTACAAATTGC---TGTTCACCCCTTCTTAGCTCA--TCCCCTTGGATAACAAAGCCTGCAGCTT---------------------------------------------TAGCTTC-------------TACCTG----------------------------------------------TTAGAGGC--------------------------------TGGGGGAA---------TGGTTTCAAG---------------------------------------------------------AATGCAGGGGGATCTAGATTCTAATTAACCTTTCCACTGATTGCAGGACAGCTTTGGGTGAAT--CATGGCTTTTGATTTTTTTTTGCTTTTGCTTTTTAATAGATGGGGAAGAAAGGCTACACAGT-----ACATTAATTTTCAGTTT i mm10.chr11 I 154 C 0 s canFam3.chr9 15698352 669 - 61074082 CTGGGAAAAGGTTCTAAAGTGATCTGAACAAGGAACCGGCTTTCCT-TTTTTGCAAATGTCtctttcaatcagcaaatgtttcctgagcacctttcatgtgcagagcactgcaggaaa-cagagTAAGTGTCCATGGCCCCCCTCCCCCTTCCCGGACTCTGCT----------------------------------------------------------------GAGTTATAATCAGGA---TGTGGAATGAAACTGGGAAGGCAGAGCATGTGCT-----------------CTAATTGTATTAATCAGCTTTCAATTGCTT--AAATTGG---TCTTCTCCCCTCTCCAGCTCA-GCTGCCTTGGAGAATG---CCTGCATCCTCAAAGACTTACTCCAGAGCTACAGGCCCTAAAAAGAGCTAGAGGAAAGGTTTCTAGAATCCTGGGGAATTTAtttttttaaagattttatttatttattcatgagaaacagagagactgagaggcagagacacaggcagagggtgaagcagactccatgcagggacccgatccctggtctccaggggtcacgccctgggccaaaggcaggcgctgaacaactgagccatccaggGATCCCCAATCCTGGGGAATTTAGAATCTAATTAACTTCTCCATGGGTTACAGTGTAACTTTGAGTGTGTGCCA-------------CTCTATTTTTTTT---TTTAATGAATCGAGATTAAAGGCTAATATATATATAAAACATGTCCATAGCTT i canFam3.chr9 C 0 I 429 e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=944855.000000 s hg38.chr17_GL383563v3_alt 243591 433 + 375691 GCAACATCCTGTGCTTAG----AAGCCGCCAGGGCCGTTCCTCCCAGCCCCAACTAACGCACCCATGAAAGCACGTGGAAAAGGCACCGCGAAACCCCAGCCCGGGGCCTCTGACAGCTCAGCACCAGGCTCCACATCAGGTGAGGGGATGAGGCGGGAGACGGGAGGCGTGCCATGGA--------------------------------------CCACCTGGgcctcgcctgcccacctgggcctcgcctgcctggcTGGAGTAGG--GGCAGCAGCTGAAGCCGCCTGGGCAGCCTT---CCTGGCACTTCAGGGCTGCCAGTTCCTGGGGCCACAGGGGCTGTCCTCCCTCCGCCAACCCTCCTGTCATCCCTGGGAGATACAGCTTCCAGAATCTAGCCAGTCCGGCAATGTGAGTTGCATTGGGGAAGGAGTATTTCCTGAAGCAAGGCTGCATCTGGGAGAGCAGGGAGA-GC s panTro4.chr17 218187 452 + 82630442 GCAACAACCTGTGCTTAG----AAGCCGCCAGGGCCGTTCCTCCCAGCCCCAACTAACGCACCCATGAAAGCACGTGGAAAAGGCACTGCGAAACCCCAGCCCGGGGCCTCTGACAGCTCAGCGCCAGGCTGCACATCAGGTGAGGGGATGAGGCGGGAGACGGGAGGTGTGGTATGGA-------------------CCATCTCGGCCTCGCCTGCCCACCTGGGCCTCGCCTGCCCACCTGGGCCTCGCCTGCCTGGCTGGAGTAGG--GGCAGCAGCTGAAGCCGCctgggcagcctt---cctggcacttcagggctgccagttcctggggccacagaggctgtcctccctccgccaaccctcctgtcatccctgggagatacagcttccagaatctagccaggccggcaatgtgagttgcattggggaaggagtatttcctgaagcaaggctgcatctgggagagtagggaga-gc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 105987 415 + 73212453 gcaacatcctgtgctcag----aagccgccagtgccgttcctcccagccccaattaaggcacccatgaaagcacatgaaaaagGCACCGCGAAACCCCAGCACGGGGCCTCTGACAGCTCAGCGCCAGGCTCCACATCAGGTGGGGGGATGAGGCGGGAGGCGGGAGGCGTGCTATGGA---------------------------------------------------------CCACCTGGGCCTCGCCTGCCTGGCTGGGGTAGG--GGCAGCAGCTGAAGCCACctgggcagcctt---cctggcaccgcagggctgtcagttcctggggccacaggggctgtcctccctccgccaaccttcttgtcatccctgggagatacagcttccagaatctagccaggccggcaatgtgagctgcattggggaaggggtatttcctgaagcaaggctccgtctgggagagaagggagaggc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 223308 402 - 81552678 GCAACATTATGTGCTTAG----AAGCCGCCAGTGCCGTTCCTCCCAGCCCCAACTCACGCACCCATGAAAGCACGTGGAAAAGGCACCGCGAAACCCCAGCACGGAGCCTCTGACAGCTCAGCGCCAGGCTCCACATCAGGTGAGGGGATGAGGCGGGAGGCAGGAGGCGTGCTATGGA---------------------------------------------------------CCACCTGGGCCTCGCCTGCCTGGCTGGGGTAGG--GGCAGGAGCTGAAGCCGCCTGGGCAGCCTT---CCTAGCACTGCAGGGCTGCCAGTTCCTGGGGCCACAGGGGCTGTCCTCCCTCTGC------------CATCCCTGGGATATACAGCTTCCAGAATCGAGCCAGGCCGGCAGTGTGAGCTGCACTGGGGAAGGAGTACTTCCTGAAGCAAGGATGCGTCTGGGAGAGCAGGGAGA-GC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 134646 419 + 80904711 GCAACATCGTGTGCTTAG----AAGCTGCCAGTGCAGTTCCTCCCAGTCCCAACTGTCTCACCCATGAAAGCACGTGAAAAAGGCACCGCGAAACCCCAGCACGGGGCCTCTGACAGCTCAGTGCCAGGCTGCACATCAGGTGAGGGG--------------AGGAGGCGTGCTATGGA--------------------------------------CCACCTGAGCCTCGCCTGCCCACCTGGGCCTCGCCTGCCTGGCTGGGATGGG--GGCAGGAGCTGAAGCTGCCTGGGCAGCCTT---CCTGGCACAGCAGGGCTGCCAGTTCCTGGGGCCACAGGGGCTGTCCTCCCTCCTCCAACCCTCTTGTCAGCCCTGGGAGATACAGCTTCCAGAATC-AGCCAGGCCGGCGATGTGAGCTGCACTGTGGAAGGAGTATTTCATGAAGCAAGGCTCCATCTGGGAGAGCAGGGAGAGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 140088 419 + 80997621 GCAACATCGTGTGCTTAG----AAGCTGCCAGTGCAGTTCCTCCCAGTCCCAACTGTCTCACCCACGAAAGCACGTGAAAAAGGCACCGCGAAACCCCAGCACGGGGCCTCTGACAGCTCAGTGCCAGGCTGCACATCAGGTGAGGGG--------------AGGAGGCGTGCTATGGA--------------------------------------CCACCTGAGCCTCGCCTGCCCACCTGGGCCTCACCTGCCTGGCTGGGATGGG--GGCAGGAGCTGCAGCTGCCTGGGCAGCCTT---CCTGGCACAGCAGGGCTGCCAGTTCCTGGGGCCACAGGGGCTGTCCTCCCTCCTCCAACCCTCTTGTCAGCCCTGGGAGATACAGCTTCCAGAATC-AGCCAGGCCGGCGATGTGAGCTGCGCTGCGGAAGGAGTATTTCATGAAGCAAGGCTCCATCTGGGAGAGCAGGGAGAGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 139043 419 + 74645514 GCAACATCGTGTGCTTAG----AAGCTGCCAGTGCAGTTCCTCCCAGTCCCAACTGTCGCACCCATGAAAGCACGTGAAAAAGGCACCGCGAAACCCCAGCACGGGGCCTCTGACAGCTCAGTGCCGGGCTCCACATCAGGTGAGGGG--------------AGGAGGCGTGCTATGGA--------------------------------------CCACCTGAGCCTCacctgcccacctgggcctcgcCTGCCTGGCTGGGATGGG--GGCAGGAGCTGAAGCTGCCTGGGCAGCCTT---CCTGGCACAGCAGGGCTGTCAGTTCCTGGGGCCACAGGGGCTGtcctccctcctccaaccctctTGTCAGCCCTGGGAGATACAGCTTCCAGAATC-AGCCAGGCCGGCGATGTGAGCTGCACTGCGGAAGGAGTATTTCATGAAGCAAGGCTCCATCTGGGAGAacaggaagaggc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 127382 471 + 75148670 GCAACATCGTGTGCTTGG----AAGCTGCCAGTGCAGTTCCTCCCAGTCCCAACTGTCGCACCCATGAAAGCACGTGAAAAAGGCACTGCAAAACCCCAGCACGGGGCCTCTGACAGCTCAGTGCCGGGCTCCACATCAGGTGAGGGGTGAGGGGATGAGGTGGGAGGCGTGCTATGGACCACCTGGGCCTCGCCTGCCCACCTGGGCCTCGCCTGCCCACCTGAGCCTCGCCTGCCCACCTGGGCCTCGCCTGCCTGGCTGGGATGGG--GGCAGGAGCTGAAGCTGCCTGGACAGCCTT---CCTGGCACAGCAGGGCTGCCAGTTCCTGGGGCCACAGGGGCTGTCCTCCCTCCTCCAACCCTCTTGTCAGCCCTGGGAGATACAGCTTCCAGAATC-AGCCAGGCCGGCGATGTGAGCTGCACTGCGGAAGGAGTATTTCCTGAAGCAAGGCTCCATCTGGGAGAGCAGGGAGAGGC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75870996 336 + 122082543 GCTACCTTTAGTGCCAAGTTTAGAGCCTCCAGGGGGGTCTCCTCCAACCCCAAGTGACATACCGGTGGAGACCTGTGAGAGGTGGAACTAAAGACTGCAA------------------------------------------GCAGGG--------------ATGAGGC------TGTA-----------------------------------------------------------------GCCAGGCCTGCCTGCCTAGCATGTGATGGAGGGGATTAAGTGTGTGATGTCACACTCAGGCCTGGCCTAGCAGAGTGGTCTGT-----GGCACACAGA-GCCATCCTTTGTCTTTCATCCCTGCTACCATCCTCAAGAGATGAGATTCCCAGACAC-AGCCGGGCTGGCAATGTAAATTGCATCTGGGA------TTTACCTCAGTCGGGCTCCCACCCAGGGGAGCAGAGC----- i mm10.chr11 C 0 C 0 e canFam3.chr9 15699021 429 - 61074082 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I a score=1141215.000000 s hg38.chr17_GL383563v3_alt 244024 669 + 375691 AGGAAGAGCGGAGGAGACAGCATAAGCCAGGGGCTGCGGTCCCT-CGTCCTCCCTGGTTCCGACGGGCCAGGTCGCAGGAGAGTCAAAGGTGCCTCCTGCATGGGGCAGGGT--CACAGGCACAATCCCAGACCAAGGGAGGGGCTATGAGGAG--------ACGCCTTGGAGTCAATCCTGGGTCTGCGGGGCTT--------------------------------------------AGGCTGCTGCAGAAGCGGGGAGG---GG-AAAACCTCCAAAG----------------TGTTTAG----TGCAGGTGAATGTGGCATGCTAGGGCTCAGGAACATAATTAGACAATTGTTTGGTGTCTAGGAAACATAAAGACGGGCCTTACTAATAAA------------------------------------ATAGAAAACCAAAAGAAGAAAAGGAGCAAAATAAAGGAAATAATGGAGGACTG------CCGGGAAACC---------AGAGTGGAGAACAGAATCGAAACTTACACCGGA-GG---------GGAAAGAGCAGACGTG-GTCACGgagaaaacag---agtagctggaatg----ctgttct--aggctcataggagcatgagctggtattaatacaggcactctggaaaatgatcaggaattacccaatagagttgaatgtggacacaccccataatccaagagaaaccctcaggcctaaaatctgcagaaactcttgtacatgaacatgtactccaggagacatgaatgtttacagcacaattattcataacagcaaaa-----aa-- s panTro4.chr17 218639 710 + 82630442 aggaagagcgcaggagacagcataagccaggggctgcggtccct-cgtcctccctggttccgaCGGGCCAGGTCGCAGGAGAGTCAAAGGTGCCTCCTGCATGGGGCAGGGT--CACAGGCACAATCCCAGACCAAGGGAGGGGCTATGGGGAG--------ATGCCTTGGAGTCAATCCTGGGTCTGCGGGGCTTGCCGCATCGGAGGGTGGACAAACAGGGAGACGGGGGCCTGGGAAAGGCTGCTGCAGAAGCGGGGAGG---GG-AAAACCTCTAAAG----------------GGTTTAG----TGCAGGTGAATGTGGCATGCTAGGGCTCAGGAAAATAATTAGACAAGTGTTTGGTGTCTAGGAAACATAAAGACGGGCCTTACTAATAAA------------------------------------ATAGAAAACCAAAAGAAGAAAATGAGCAAAATAAAGGAAATAACGGAGGACCG------CCGGGAAACC---------ATAGTGGAGAACAGAATTGAAACTTACACCGGA-GG---------GGAAAGAACAGACGTG-GTCGCGGAGAAAACAG---AGTGGCCGGAATG----CTGTTCT--AGGCTCATAAGAGCATGAGCTGGTattaatacaagcactctggaaaatgatctggaattacccaatagagttgaatgtggacacaccccataatccaagagaaaccctcaggcctaaaatctgcagaaactcttgtacatgtacaggtactccaggagacatgaatgtttacagcacaattattcataacagc---a-----aa-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 106402 712 + 73212453 aggaagagctgaggagacagcacaagccaagggctgcagtccct-cgtcctccctggttcCCACCGGCCAGGTTGCAGGAGAGTCAAAGGTGCCTCCTGCGTGGGGCAGCGT--CACAGGCACAATCTCGGACCAAGGGAGGGGCTATGAGGGG--------ATGCCTCGGAGTCAATCCTGGGTCTGCAGGGCTTGCCGCATCAGAGGGTGGACAAAGAGGGAGACGGGGGCCTGGGAAAGGCTGCTGCAGAAGCGGGGAGG---GG-AAAACCTCTAAAG----------------CGTTCAG----TGCAGGTGGATGTGGCATGCTAGGGCTCAGGAAAATAATTAGACAATTGTTTGGTGTCTAGGAAACATAAAGACGGGCCTTACTAATAAA------------------------------------ACAGAAAACCAAAAGAAGAAAACGAGCAAAATAAAGGAAATAATGGAGGACCG------CAGGGAAACCA-------GAGAGTGGAGAGCAGAATCGAAACTTACACCGGA-GG---------GGAAAGAGCAGACGTG-GCCGCGGAGAAAACAG---AGTTCCTTGAACG----CTGTTCT--AGGCTCATAAGAGCATCAGTTGGGattaatacaagtactctggaaaatgatcaggaattacccaacagagctgaatgtggacacaccccgtaatccaagagaaaccctcaggcctaaaatctgcagaaactcttgtacatgtacatgtactccaggagacatgaatgtttacagcacaattattcataacagg---a-----aa-- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 135065 705 + 80904711 AGGAAGAGCCGAGGACACAGCACAAGCCAGGGGCTGCGGTCCCT-CGTCCTCCCTGGTTCTGAGGGGCCAGGTCACAGGAGAGTCAAAGGTGCCTCCTGCGTGGGGCAGCGT--CACAGGCACAATCCCAGGCCCAGGGAAGGGCCACGAGAAG--------ATGCCTCGGAGCCAGTCATGGGCCTGCAGGGCTCGCCGCATCGGAGGGTGGACAAACAGGGAGACGGGGGCCTGGGACAGGCTGCGGTAGACGCAGGGAGG---GG-AAAACCTCTAAAG----------------CATTTCG----TGCAGGTGAATGTGGCTTGCTGGGGCTCGGGAAAATAATTAGACAATTGTTTGGTGTCTAGGAAACATAAAGACTGACCTTACTAATAAA------------------------------------ATAGAAAACCGCAAGAAGAAAACGAGTAAAATAAAGGAAATAGTGGAGGACTG------CAGGGAAACCA-------GAGAGTGGAGAGCAGAACCAAAACTTACACTGGATGG---------GGAAAGAGCAGACACG-GCTGCGAGGAAAACGG--AAGTGGCTGGGATG----CTCTTCT--AGGCGCATAAGAGCATCAGCTGGTattaacacaagtactttggaaaagggtcaggaatcacccagtagagttgaatgtggacacaccccgtaatccaagagaaaccctt-ggcctaaaatccacagaaactcttgcacag------gtgctccaggagccatgaacgttcacagcaggattatttataatagc---a--------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 140507 705 + 80997621 AGGAAGAGCCGAGGACACAGCACAAGCCAGGGGCTGCGGTCCCT-CGTCCTCCCTGGTTCTGAGGGGCCAGGTCACAGGAGAGTCAAAGGTGCCTCCTGCGTGGGGCAGCGT--CACAGGCACAATCCCAGGCCCAGGGAAGGGCCACAAGAAG--------ATGCCTCGGAGCCAGTCCTGGGCCTGTAGGGCTCGCCGCATCGGAGGGTGGACAAACAGGGAGACGGGGGCCTGGGACAGGCTGCGGTAGACGCAGGGAGG---GG-AAAACCTCTAAAG----------------CATTTCG----TGCAGGTGAATGTGGCTTGCTGGGGCTCGGGAAAATAATTAGACAATTGTTTGGTGTCTAGGAAACATAAAGACTGACCTTACTAATAAA------------------------------------ATAGAAAACCGCAAGAAGAAATCGAGTAAAATAAAGGAAATAGTGGAGGACTG------CAGGGAAACCA-------GAGAGTGGAGAGCAGAACCAAAACTTACACTGGAGGG---------GGAAAGAGCAGACACG-GCTGCAAGGAAAACGG--AAGTGGCTGGGATG----CTCTTCT--AGGCGCATAAGAGCATCAGCTGGTattaacacaagtactttggaaaagggtcagcaatcacccagtagagttgaatgtggacacaccccgtaatccaagagaaatcctt-ggcctaaaatccacagaaactcttgcacag------gtgctccaggagccatgaacattcacagcaggattatttataatagc---a--------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 139462 699 + 74645514 aggaagagcCGAGGACACAGCACAAGCCAGGGGCTGCGGTCCCT-CgtcttccctggttctgaggggCCAGGTCACAGGAGAGTCAAAGGTGCCTCCTGCGTGGGGCAGCGT--CACAGGCACAATCCCGGGCCAAGGGAAGGGCCATGAGAAG--------ATGCCTTGGAGCCGGTCCTGGGCCTGCAGGGCTCGCCGCATCGGA-GGTGGACAAACAGGGAGACAGGGGCCTGGGACAGGCTGCGGTAGAAGCAGGGAGG---GGAAAAACCTCTAAAG----------------CATTTCG----TGCAGGTGAATGTGGCTTGCTGGGGCTCGGGAAAATAATTAGACAATTGTTTGGTGTCTAGGAAACATAAAGACTGGCCttactaataaa------------------------------------atagaaaaccgCAAGAAGAAAACgagcaaaataaaggaaatagt------------------gGAAACCA-------GAGAGTGGAGAGCAGAACCAAAACTTACACTGGAGGG---------GGAAAGAGCAGACATG-GCTGCGAGGAAAACGG--AAGTGGCTGGGATG----CTCTTCT--AGGCGCATAAGAGCATCAGCTGGTATTAACACAAGTACTTTGGAAAAGGATCAAGAATCACCCAGTAGAGTTGAATGTGGACACACCCTGTAATCCAAGAGAAACCCTT-GGCCTAAAATCCACAGAAACTCTTGCACAGGTACATGTGCTCCAGGAgccatgaatgttcacagcaagattatttataatagc---a--------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 127853 714 + 75148670 AGGAAGAGCCGAGGAGACAGCACAAGCCAGGGGCTGCGGTCCCT-CGTCCTCCCTGGTTCTGAGGGGCCAGGTCACAGGAGAGTCAAAGGTGCCTCCTGCATGGGGCAGCGT--CACAGGCACAATCCCAGGCCCAGGGAAGGGCCATGAGAAG--------ATGCCTCGGAGCCAGTCCCGGGCCTGCAGGGCTCGCCACTTCAGAGGGTGGACGCACAGGGAGACGGGGGCCTGGGACAGGCTGCTGTAGAAGCAGGGAGG---GG-AAAACCTCTAAAG----------------CATTTCG----TGCAGGTGAATGTGACGTGCTGGGGCTCGGGAAAATAATCAGACAATTGTTTGGTGTCCAGGAAACATAAAGACTGGCCTTACTAATAAA------------------------------------ACAGAAAACCACAAGAAGAAAACGAGCAAAATAAAGGAAATAGTGGAGGACTG------CAGGGGAACCA-------GAGAGTGGAGAGAAGAACCAAAACTTACACTGGAGGG---------GGAAAGAGCAGACACG-GCTGTGAGGAAAACGG--AAGTGGCTGGAATG----CTCTTCT--AGGCGCATAAGAGTGTCAGCTGGTattaacacaagtactttggaaaagggtcaggaatcacccaacagagttgaatgtggacacagcccgtaatccaagaggaaccggt-ggcctaaaatccacagaaactcttgcacaggtacatgtgctcc--gagccatgaatgttcacagcacgattatttatactagc---aaaaaa---- i chlSab2.chr16 C 0 I 363 s mm10.chr11 75871332 757 + 122082543 CGGGGGTGCAGAGGAGATGGCACAAA-GAGGGGCTAATGTCCTTGGGGCCTGACCCCTTTCTAATGGCCA------CAGAGAATCACAGGCGCTGCTTCTGAGACGTAGAATGACACAGGTAAAAGTTCCTAGCAGAGAAGGGGATGTGAGAAGTTTTCCTACTGTTTCCAGGTCAG-CCTTGGTCTACTGGGCTCCATGCATCAGAAGACTAACGACCAGGGGAACCTTGAACCTGGGAAAACTGACATAGACGCGGACAGGGTAGG-GACAACTCTAGAGACACCAACTCACAGGACACATGGGAACTGCA--TGAATGTG-CTTGCCA-GGTTCAG--AGGGAAATGGAGAGTCATTCAGCGTCTTGAAAAGATGAATGCTGGTCTAGGAAACAGAGCCTGGAGAACAGATTGAGTGTTTTGAGGCAGGAGGATTGAAAATTAGAGGCAAACAAATAGTAACCCAAAAGGAAGGCTGTAGACCTGGGCAGAAAGGGAAGAAATGAAAATGGGAGGAAATAGCAGCAGCTGAGCCTGCACTgga-ggcaggagccaggagccaggagccaggagccaggagAGTGACAGCTGAGTGGCTGGAGGGGGACCTGTGCCTAATGCTCATAAGAGCATCAGTTGGCTT-----------CTCTGACATATAACTGGGAGTCAC---ATGAAGTCAAAGATGAGCATGTATTATGGCCTAAGAGAAACTCTC------------------TTCTCT-------------GTTCCCAGGGATAACTGAGTGGCTAGTGGAGGATCGTTCCTAACAGC---A-----AAGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15699021 429 - 61074082 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I e nomLeu3.chr19 223710 0 - 81552678 C a score=46472.000000 s hg38.chr17_GL383563v3_alt 244693 59 + 375691 aacaaaaaacaaaaaaaggagagtaaccaaaatgatcaccaatggtagaatggataaat- s panTro4.chr17 219349 55 + 82630442 aacaaa----gaaaaaacgagagtaaccaaaatggtcgccaatggtagaatggataaat- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 107114 51 + 73212453 aa--------aaaaaactgagagtaaccaaaatgatcaccaatggtagaacggacaaat- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 135770 48 + 80904711 ----------aaaaagcggagagtaaccaaaatgatcaccaa-ggtagaatggataaac- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 141212 48 + 80997621 ----------aaaaagcggagagtaaccaaaatgatcaccaa-ggtagaatggataaac- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 140161 48 + 74645514 ----------aaaaagcGGAGAGTGACTAAAATGATCACCAA-GGTAGAACGGATAAAC- i papAnu2.chr16 C 0 I 321 s mm10.chr11 75872089 39 + 122082543 --------------AACAGAGACC--CTGAAA---TCACCAATGGGAGAA--AAAGGACT i mm10.chr11 C 0 C 0 e canFam3.chr9 15699021 429 - 61074082 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I e chlSab2.chr16 128567 363 + 75148670 I e nomLeu3.chr19 223710 0 - 81552678 C a score=364649.000000 s hg38.chr17_GL383563v3_alt 244752 229 + 375691 --aggtacgt----------attttttacaatgggatatagaccacagtgatgg---gaatgaatacagctacacacatcaacatgggtgaatttcaagatcacaatgtcg----aataaagaagaaatgcacagaaaaatacacacagatccaccttgtttatgtcacattcaaacacaagcagaactaagcatggggaCGTCTGCAGTGGGGTAACGA------------CTCCAGTGGTAATTAGTGGGTACCTCTT s panTro4.chr17 219404 229 + 82630442 --aggtacgt----------attttttaaaatgggatataggccacagtgatgg---gaatgaatacagctacacgcatcaacatgggtgaatttcaagatcacaatgttg----aataaagaagaaatgcacagaaaaatacacacagatccaccttgtttctgtcacattcaaacacaagcagaactaagcaTGGGGACGTCTGCAGTGGGGTCACGA------------CTCCAGTGGTTATTAGTGGGTACCTCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 107165 229 + 73212453 --aggtatgt----------attttttacaatgggatatagaccacggtgatag---gaatgaatacagctacacgtatcaacgtgggtgaatttcaagatcacaatgttg----aataaagaagaaatgcacagaaaaatacacacagatccaccttgtttatgtcacattcaaacaccagcagaactaagcATGGGGACTTTTACAGTGTGGTAACAA------------CTGCAAtggtaattagtgggtacctctt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 135818 245 + 80904711 --aggtatgt----------attttttacagtgggatatagactgcagtgatgg---gaacgaatccagctgcatgtgtcaacatgggtgaatttcaggatcacaaagttgaatgaataaagaagaaacatacagaaaaatacacacagacccaccttgtttatgtcacatgcaaacacaagcagaactaagcaTGGGGACTTTGGCAGTGTGGTAATGACCTGTTTCTCAGCTCCTGTGGTAATTAGTGGGTACCTCTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 141260 245 + 80997621 --aggtatgt----------attttttacagtgggatatagactgcagtgatgg---gaacgaatccagctgcatgtgtcaacatgggtgaatttcaggatcacaaagttgaatgaataaagaagaaacatacagaaaaatacacacagacccaccttgtttatgtcacatgcaaacacaagcagaactaagcaTGGGGACTTTGGCAGTGTGGTAATGACCTGTTTCTGAGCTCCTGTGGTAATTAGTGCGTACCTCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 140530 233 + 74645514 --aggtatGT----------ATTTTTTACAGTGGGATATAGACCGCAGTGATGG---GAACGAATCCAGCTGCACGTGTCAACATGGGTGAATTTCAGGATCACaaaattgaatgaataaagaagaaacatacagaaaaatacacacagaCCCACCTTGTTTATGTCACACGCAAACACAAGCAGAACTAAGCATT------------GTGTGGTAACGACCTGTTTCTCAGCTCCCGTGGTAATTAGTAGGTACCTCTT i papAnu2.chr16 I 321 C 0 s chlSab2.chr16 128930 244 + 75148670 --aggtatgt----------attttttacagtgggatatagaccgcagtgatgg---gaacgaatccagctgcacgtgtcaatgt-ggtgaatttcaggatcacaaagttgaataaataaagaagaaacatacagaaaaatacacacagacccaccttgtttatgtcacatgcaaacacaagcagaactaagcaTGGGGACCTTGGCAGTGTGGTAATGACCTGTTTCTCAGCTCCCAGGGTAATTAGTGGGTACCTCTT i chlSab2.chr16 I 363 C 0 s mm10.chr11 75872128 202 + 122082543 AGAGGGAGATTGCAGGGGAGAGGGTCCACAGCAGGAAATAGA-------GACAGGCAGGACAAATGCATATGCATGCATTGACAT-GCTCAGTTTCAGAATCACAACATTA----------GAGCAGCCAGCTCAGAAAATGAAGGCAGG------------ACGCTGCACTCAAA----GGCAGAT---------------------GTGTCCTGACCACACGCTTGA---CTTGGGTACTGGCTAGTTCCTATCAGTT i mm10.chr11 C 0 C 0 e canFam3.chr9 15699021 429 - 61074082 I e calJac3.chrUn_GL286409 938617 155 - 1291538 I e nomLeu3.chr19 223710 0 - 81552678 C a score=152588.000000 s hg38.chr17_GL383563v3_alt 244981 82 + 375691 TTATTATG--------------------------------------------------------------ATTCTTCA---------AACTGCACACAAGTGTTTCTGA-GTACAGTTT-------------GGAACCATAAGCT-cccaggctggagtacattggtg s panTro4.chr17 219633 82 + 82630442 TTATTATG--------------------------------------------------------------ATTCTTCA---------AACTGCACACAAGTGTTTCTGA-GTACAGTTT-------------GGAACCGTAAGCT-cccaggctggagtacattggtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 107394 81 + 73212453 ttattatg--------------------------------------------------------------attcttta---------aactgtacacaagtgttt-tga-gtacagttt-------------agaactgtAAGCT-cccaggctggagtacattggtg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 136063 145 + 80904711 TTATTATGATTCTTTAAACTGCCCTGTTTCTCAGCTCCTGTGGTAATTAGCGCGTACCTCTTTTATTATAATTCTTTA---------AACTGTACACGAGTTTTTTTGA-GTCCAGTTT-------------AGAACTGTAAGCTgcccaggctggagtacgtcagta i rheMac3.chr16 C 0 C 0 s macFas5.chr16 141505 83 + 80997621 TTATTATG--------------------------------------------------------------ATTCTTTA---------AACTGTACACGAGTTTTTTTGA-GTCCAGTTT-------------AGAACTGTAAGCTgcccaggctggagtacgtcggta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 140763 83 + 74645514 TTATTATG--------------------------------------------------------------ATTCTTTA---------AACTGTACACGAGtttttttGA-GTCCAGTTT-------------AGAACTGtaagctgcccaggctggagtacgtcGGTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 129174 83 + 75148670 TTATTATG--------------------------------------------------------------ATTCTTTA---------AACTGTACACGAGTTTTTTTGA-GTCCAGTTT-------------AGAACTGTAAGCTgcccaggccggagtatgtcggta i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 938772 83 - 1291538 TTATTACG--------------------------------------------------------------ATCCCCAA---------CACTGTGCAGAACTGTTTTTGA-GCACAGTTT-------------AGAATTGTAAACTgcccaggcttgagtgcactggtg i calJac3.chrUn_GL286409 I 155 C 0 s mm10.chr11 75872330 104 + 122082543 CTATTATG--------------------------------------------------------------ACCCTTCAGGCACACATGGCTGTAGA-AATTGTTTTTGACATGGAGTCTTGCTATGCTCAGGAAAGACTTTAGCT-TCCAGACTTAAGCGCCTCAGTG i mm10.chr11 C 0 I 3195 e canFam3.chr9 15699021 429 - 61074082 I e nomLeu3.chr19 223710 0 - 81552678 C a score=529216.000000 s hg38.chr17_GL383563v3_alt 245063 234 + 375691 caattacggttcaccgcagcctcgacctctggggcttaagcagtcctcccacctcagcctcctga-tagctgaggctacaggcgtgtgccactatacctggc---taatgtgggga-ttttttgtagagagggtgtttcaccatgttgcccaggctggtctcaagctcctgggctcaagcaatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccatgccca s panTro4.chr17 219715 235 + 82630442 caattacggttcactgcagcctcgacctctggggcttaagcagtcctcccacctcagcctcctga-tagctgaggctacaggcgtgtgccactatacctggc---taatttggggatttttttgtagagagggggtttcaccatgttgcccaggctggtctcaagctcctgggctcaagcaatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgtgccca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 107475 234 + 73212453 caattatggttcactgcagcctcaacctccagggcttaagcaaccctcccacctcagcctcctga-tagctgagactacaggcgcctgccactatacctggc---taatttgggga-ttttttgtagagagggggtttcaccatgttgcccaggctggtctcaaactcctgggctcaagcaatctgcccaccttggcttcccaaagtgctgggattgcaggtgcgagccaccatgcccg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 136208 237 + 80904711 caattatggttcactgcagcctcaacctccgcggcttacgcaatcctcccacctcagcctcctgactagctgagactacaggtgcgtgccactatacctggttaataatttaggga-ttttttgtagagagggggtttcaccatgttgcccaggctggtctcaaactcctgggctcaagcaatccacccaccttggcctcccaaagtgttgggattacaggtatgagcca-cATGTCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 141588 237 + 80997621 caattatggttcactgcagcctcaacctccggggcttacgcaatcctcccacctcagcctcctgactagctgagactacaggtgcgtgccactatacctggttaataatttaggga-ttttttgtagagagggggtttcaccatgttgcccaggctggtctcaaactcctgggctcaagcaatccacccaccttggcctcccaaagtgttgggattacaggtatgagcca-cATGTCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 140846 238 + 74645514 CaattatggttcactgcagcctcaacctccggggcttacgcaatcctcccacctcagcctcctgactagctgagactacaggtgcgtgccactataCCTGGTTAATAATTTaggga-ttttttgtagagagggggtttcaccatgttgctcaggctggtctcaaactcctgggctcaagcaatccacccaccttggcctcccaaagtgctgggattacaggtatgagccaccatgtcca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 129257 239 + 75148670 caattatggttcactgcagccttaacctccggggcttatgcaatcctcccacctcagcctcctgactagctgagactacaggcgcgtgccaccatacctggttaataatttagggatttttttgtagagagggggtttcactgtgttgtccaggctggtctcaaactcctgggctcaagccatccacccaccttggcctcccaaagtgctgggattacaggtatgagccaccatgtcca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 938855 235 - 1291538 caattacagctcactgcagtctcgacctccagggcttaagcaatcctcccacctctgcctcctgactagctgggactacaggcatgtgccactatacctagc---taattttggta-ttttttgtagagacagggttttaccatgttccccaggctggtgtcaaacttctgggctcaagcaatctacccacccttgcctcctgaattgctgggattacaggtgtgagccaccacaccca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75872434 3195 + 122082543 I e canFam3.chr9 15699021 429 - 61074082 I e nomLeu3.chr19 223710 0 - 81552678 C a score=436579.000000 s hg38.chr17_GL383563v3_alt 245297 187 + 375691 gGCTTATTCCCTTTTTTGTTTATTTAAATCTTGAACACACATCACAGTTTATTAATCCACCAGCAAGAAAACCAGGCGAGGGAC--TAGAGTGTGCCAGTCCACAGCGGGAATGGAATGGAAAGTCCAGAGCTGGGAAATGGAGCTCTGAG------------CTAAGCAGCCAGTTTACAAAGGCAAGCAGCTCATTAGG s panTro4.chr17 219950 187 + 82630442 gGCTTATTCCCTTTTTTGTTTATTTAAATCTTGAACACACATCACAGTTTATTAATCCACCAGCAAGAAAACCAGGCGAGGGAC--TAGAGTGTGCCAGTCCACAGCGGGAGTGGAATGCAGAGTCCAGAGCTGGGAAATGGAGCTCCGAG------------CTAAGCAGCCAGTTTACAAAGGCAAGCAGCTCATTAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 107709 187 + 73212453 gGCTTATTCCCCTTTTTGTTTATCTAAATCTTGAACACACGTCACAGTTTATTAATCCACCAGCAAGAAAACCAGGCGAGGGAC--TACAGTGTGCCAGTCCACAGCGGGAATGGAATGGAGAGTCCAGAGCTGGGAAATGGAGCACTGAG------------CTAAGCAGCCAGTTTACAAAGGCAAGCAGCTCATTAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 136445 175 + 80904711 GGCTTATTCCCTTTTTTGTTTATTTAAATCTTGAACACACGTCACAGT---TTAATCCTCCAGCAGGAAAACCAGGCGAGGGAC--TAGAGTGTGCCAGTCCGCGGCGGGAATGG-----AGAGTCCAGAGCTGGGAAACGGAGCACTGAG------------CTAAGCAGCCAGTTTACAAAG----GCAGCTCATTAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 141825 175 + 80997621 GGCTTATTCCCTTTTTTGTTTATTTAAATCTTGAACACACGTCACAGT---TTAATCCTCCAGCAGGAAAACCAGGCGAGGGAC--TAGAGTGTGCCAGTCCGCGGCGGGAATGG-----AGAGTCCAGAGCTGGGAAACGGAGCACTGAG------------CTAAGCAGCCAGTTTACAAAG----GCAGCTCATTAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 141084 174 + 74645514 ggcttattcccttt----tttatttaaatcttgaACACACGTCACAGTTTATTAATCCACCAGCAGGAAAACCAGGCGAGGGAC--TAGAGTGTGCCAGTCCATGGCAGGAATGG-----AGAGTCCAGAGCTGGGAAACGGAGCACTGAG------------CTAAGCAGCCAGTTTACAAAG----GCAGCTCATTAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 129496 183 + 75148670 gGCTTATTCCCTTTTTTGTTTATTTAAATCTTGAACACACGTCACAGTTTATTAATCCTCCAGCAGGAAAACCAGGCGAGGGAC--CAGAGTGTGCCAGTCCACGGCGGGAATGGAATGCAGAGTCCAGAGCTGGGAAACGGAGCACGGAG------------CTAAGCAGCCGGTTTACAAAG----GCAGCTCATTAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 939090 187 - 1291538 gGCTTCTTCCCTTTTTTGTTTCTTTAAATCTTGAACACATGTCAGAATTTACTAATTCACCAGCAAGAAAACCAGGCAATGGAC--TAGAGTGTAGCAGTCCACAGCGGGAATGGAGCGGAGAGTCAAGAGGTGTGGAATGGAGCGCTGAG------------CTAAGCAGCTAGTTTACAAAGGCAAGCAGCTCATCAGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15699450 185 - 61074082 ggcttgtccc---ttctggttatttAAATCTTGAACACATGTCTGAGTTTATTCATTTGACCACAAAGAAGTCAGGAAAGTGACCACAAAGTGTGCCTGTTCAGGGAGGGAATGG-------AGATGGGGGTGGGGGGAAGGAGTTCAGAGATCGAAAGCTTACCTAGAAGCAAATTGAAAAAA------GGCTAATTGGG i canFam3.chr9 I 429 C 0 e mm10.chr11 75872434 3195 + 122082543 I e nomLeu3.chr19 223710 0 - 81552678 C a score=549988.000000 s hg38.chr17_GL383563v3_alt 245484 185 + 375691 AGGATGTCACGGTTCTGTGTGGTCTCAAGAACCTCGTCTCCAGGACAGTTGGTACAGAGGAAATCG------GGGA--CGAGACAGTTGGGAGCACCAATCAGGAATCAAACATTTAAAATAACCAATGAGAAGCAAATGATAAGGAAACATCTGTGGCTGTTAATAGGAATGACAAGGTTCACCGTGCTAAG s panTro4.chr17 220137 185 + 82630442 AGGATGTCACAGTTCTGTGTGGCCTCAAGAACCCCGTCTCCAGGACAGTTGGTACAGAGGAAATCG------GGGA--CGAGACAGTTGGGAGCACCAATCAGGAATCAAACATTTAAAATAACCAATGAGAAGCAAATGATAAGGAAACATCTGCGGCTGTTAATAAGAATGACAAGGTTCACCATGCTAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 107896 161 + 73212453 AGAATGTCACGGTTCTGTGTGTTCTCAAGAACCTCGTCTCCAGGACAGTTGGTATAGAGGAAATCG------GGGA--TGAGATAGTTGGGAGCACCAATCAGGAATCAAATATTTAAAATAACCAATGAGAAGCAAATAATAAGGAAACATCTGTGGCTGTTAATAGG------------------------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 223710 185 - 81552678 AGGATGTCACGGTTCTGTGTGGTCTCAAGAACCTCATCTCCAGGACAGCTGGTATAGAGGACATCG------GGGA--CGAGATAGTTGGGAGTACCAATCAGGAATCAAAAATTTAAAATAACCAATGAGAAGCAAATGATAAGGAAACATCTGTGGCTGTTAATAGGAATGACAAGGTTCACCGTGCTAAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 136620 182 + 80904711 AGAAGGTCATGGTTCTGTGTGGTCTCAGGAACCTCGACTCCAGGAC--TTGGTAGAGAGGAAATCG------GGGA--CAAGACAATTGGCAGCACCAATCAGGAATCAAAAATTTAAAATAACCAACGAGAAGCAAATGATAAGAAAACATCTGTGGCTGTT-ACAGGAATGACAAGGTTCACTGTGCTAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 142000 182 + 80997621 AGAAGGTCATGGTTCTGTGTGGTCTCAGGAACCTCGACTCCAGGAC--TTGGTAGAGAGGAAATCG------GGGA--CAAGACAATTGGCAGCACCAATCAGGAATCAAAAATTAAAAATAACCAACGAGAAGCAAATGATAAGAAAACATCTGTGGCTGTT-ACAGGAATGACAAGGTTCACTGTGCTAAG i macFas5.chr16 C 0 I 980 s papAnu2.chr16 141258 182 + 74645514 AGAATGTCATGGTTCTGTGTGGTCTCAAGAACCTCGTCTCCAGGAC--TTGGTAGAGAGGAAATCA------GGGA--CGAGACAATTGGGAGCACCGATCaggaatcaaaaattaaaaataaccaatGAGAAGCAAATGATAAGGAAACATCTGTGGCTGTT-TCAGGAATGACAAGGTTCACCGCACTAAG i papAnu2.chr16 C 0 I 980 s chlSab2.chr16 129679 182 + 75148670 AGAATGTCATGGTTCTCTGTGGTCTCAAGAACCTCGTCTCCAGGAC--TTGGTAGAGAGGAAATCG------GGGA--CGAGACAATTGGGAGCACCAATCAGGAATCAAAAATTAAAAATAACCAACGAGAAGCAAATGATAAGGAAACATCTGTGGCTGTT-ACAGGAATGACAAGGTTCACCACGCTAAG i chlSab2.chr16 C 0 I 978 s calJac3.chrUn_GL286409 939277 184 - 1291538 AAAATGTCCTGGTTCTGTATGGTCTCCGGAACCTCGTCTCCATGACA-GTGGTATAGAGGAAATTG------GGGA--CCAGACAGTTGGGAGCACCAATCAGGAATCGAAAATAAAAAACAATCAATGAGAAGCAAACGATAAGGAAACATATGTGGCTGTTAAGAGGAATGACAAGGTTTGTCGCACTAAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15699635 189 - 61074082 TAAGGATTGTAGTTTTGTGTGGTCACAAAGACTTCATATTCACGACAGTTGGTATAGCAGAAATAAAGACTCGGGACTCCAGGCTGTTGGGTGTGCCAACCAGAGATCAAAAATCAAAAA----CAGTAAGAAGCAAATGGTAAGGAAACGTGTGTGGCTGCTAATGGGAATGACAAGGTTTATTGCTTTACA i canFam3.chr9 C 0 C 0 e mm10.chr11 75872434 3195 + 122082543 I a score=25403.000000 s hg38.chr17_GL383563v3_alt 245669 7 + 375691 AAATGAC s panTro4.chr17 220322 7 + 82630442 AAATGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 108057 6 + 73212453 -AATGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 223895 7 - 81552678 AAATGAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 136802 7 + 80904711 AAATGAC i rheMac3.chr16 C 0 I 945 s macFas5.chr16 143162 7 + 80997621 AAATGAC i macFas5.chr16 I 980 C 0 s papAnu2.chr16 142420 7 + 74645514 aaatgac i papAnu2.chr16 I 980 C 0 s chlSab2.chr16 130839 7 + 75148670 AAATGAC i chlSab2.chr16 I 978 C 0 s calJac3.chrUn_GL286409 939461 7 - 1291538 AAATAAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15699824 7 - 61074082 AAATTAC i canFam3.chr9 C 0 C 0 e mm10.chr11 75872434 3195 + 122082543 I a score=41145.000000 s hg38.chr17_GL383563v3_alt 245676 21 + 375691 TAAAATATAGTtcaaccgagt s panTro4.chr17 220329 21 + 82630442 CAAAATATAGTtcaaccgagt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 108063 7 + 73212453 TAAAATA-------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 223902 21 - 81552678 TAAAATATAGTtcaactgagt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 143169 21 + 80997621 TAAAATACAGTTCAGttgagt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 142427 21 + 74645514 taaaatacaGTTCAGCTGAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 130846 21 + 75148670 TAAAATACAGTTCAGttgagt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 939468 21 - 1291538 TAAAATACAGTTCAATTGAGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15699831 21 - 61074082 TGAAGCATGGTTCAGttgagt i canFam3.chr9 C 0 C 0 e mm10.chr11 75872434 3195 + 122082543 I e rheMac3.chr16 136809 945 + 80904711 I a score=467587.000000 s hg38.chr17_GL383563v3_alt 245697 143 + 375691 tttaaaattcattcgtgagatctctcatttttagggatgaaaatggttcctggggttcttttccaaatttgcttgtacttttctcaaaggtctggtttgttcaac-ctggtttctattccttctcttagatcttttgttttatt s panTro4.chr17 220350 143 + 82630442 tttaaaattcattagtgagatctctcatttttagggacgaaaacggttcctggggttcttttccaaatttgcttgtacttttctcaaaggtctggttggttcaac-ctggtttctattccttctcttagatcttttgttctatt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 108070 141 + 73212453 --TAAAATTCATTAGTGAGATCTCTCATTTTTAGGAATGAAAACGGTTCCTGGGGTTCTTTTTCAAATTTGCTTGTACTTTTCTCAAAGGTCTGGTTTGTTCAAC-CTGGTTTCTATTCCTTGTCTTAGAtcttttgttttatt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 223923 143 - 81552678 tttaaaattcattagtgggatctctcatttttagggatgaaaacggttcctggggttctttttccaatttgcttgcacttttctcaaaggcctggtttgttcaac-ctggtttcgattccttctcttagatcttttgttttatt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 137754 142 + 80904711 tttaaaattcattag-gagatctctcatttttaggaacgaaaatggttcctggggttctttttcaaatttgtttgtacttttctcaaaggtctggtttgttcaaa-ctggtttctattccttctcttagatcttttgttttatt i rheMac3.chr16 I 945 C 0 s macFas5.chr16 143190 141 + 80997621 -ttaaaattcattag-gagatctctcatttttaggaacgaaaatggttcctggggttctttttcaaatttgtttgtacttttctcaaaggtctggtttgttcaaa-ctggtttttattccttctcttagatcttttgttttatt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 142448 141 + 74645514 -TTAAAATTCATTAG-GAGATCTCTCATTTTTAGGAATGAAAATGGTTCCTGGggttctttttcaaatttgtttgtaCTTTTCTCAAAGGTCTGGTTTGTTCAAA-CTGGTTTCTATTCCTTCTCTTagatcttttgttttatt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 130867 142 + 75148670 -ttaaaattcattag-gagatctttcattttcaggaatgaaaatggttcctggggttctttttcaaatttttttgtacttttctcaaaggtctggtttgttcaaacctggtttctattccttctcttagctctttcgttttatt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 939489 142 - 1291538 TTTAAAATTCATTAGTGAGATCTTTCATTTTTAGGAATGAGAATGGTTCC-GGGGTTCTTTTTCAAATTTGCTTGTACTTTTCTCAGAGGACTAGTTTGTTCAAC-TTGGTTTCTATTCTTTCTCTTAGATAttttgttttatt i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15699852 138 - 61074082 ttttaaatttat----aacatttctcatttttagaaatgaaaacgtttcaatggg-tatttttcaaatttgctgattccctttttaaaggtcctatttgttcagt-gtggtttctcctctgtctcttatctcttttatttcact i canFam3.chr9 C 0 I 324 e mm10.chr11 75872434 3195 + 122082543 I a score=1097097.000000 s hg38.chr17_GL383563v3_alt 245840 416 + 375691 ttagagacagggccttgctctaaagacctcagtgagc----ctttctcactaaggctggagtgcagtggcacgatctcagcccactgccacctccac------cccccgggcagaagtgatcctcccgcctcaacctcccaggaagctgggactgcaggcgctcaccacgatgcccagctaattt------ttgtattt----ttttgcagagaaaaagtcttgccatatctccca----ggctggtctcaaactcctaggctcaagcaatcctcctgcctcagcttcccaaaatgtcgggattacaggtgtgagccactgtacctggcctctcttatatcttttaattaattaattttTAAAAAACACA-TTATCATCTCTTTCACCATTTCACTATTCGCTCTCATTTTCTGGGTACCAATTCTCCAAGCTGTTATATT s panTro4.chr17 220493 416 + 82630442 ttagagacagggccttgctctaaagacctcagtgagc----ctttctcactaaggctggagtgcagtggcacgatctcagcccactgccacctccac------ctcccgggcaaaagcaatcctcccgcctcaacctcccaggaagctgggactgcaggcacgcaccacgatgcccagctaattt------ttgtattt----ttttgcagagaaaaagtcttgccatgtttccca----ggctggtctcaaactcgtaggctcaagcaatcctcctgcctcagcttcccaaaatgttgggattacaggtgtgagccactatacctggcctctctaatatcttttaattaattaattttTAAAAAACACA-TTATCATCTCTTTCACCATTTCACTATTCGCTCTCATTTTCTGGGTACCAATTCTCCAAGCTGCTATATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 108211 417 + 73212453 ttagagacagggtcttgctctaaagaccccagtgagc----ctttctcactaaggctggagtacagtggcacgatctcagcccactgccatctctac------ctcccgggcaaaagtgatcctcccacctcaacctcccaagaagctggaactacaggcgcgcaccacgatgcccagctaattt------ttgtattt----ttttgcagagaaaaagtcttgccatgtttccca----ggctggtctcaaactcctaggctcaagcaatcctcctgtctcagctgcccaaaatgttgggattacaggtgtgagccactatacctggccTGTCTTGTATCTTTTAATTAATTAATTGTTAAAAAACACATTTATCATCTCTTTCACCATTTCACTATTCGCTCTCATTTTCTGGGTACCAATTCTCCAAGCTGTTATATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 224066 413 - 81552678 tta-aggcagggtcttgctctaaagacctcagtgagc----ctttgtcactaaggctcgagtgcaggggcacgatctcagcccactggcacctccac------ctcccgggcaaaagtgatccccccacctcaacctcccaagtagctgggactacaggtgggcaccacgatgcccagctaattt------ttgtattt---gttttgcagagaaaaagtcttaccatgtttccca----ggctggtctcaaactcctaggctcaagcaatcctcctgcctcagcttcccaaaatgttgggattacaggtgtgagccactatacccggcctctcttatatctt----ttaattaattttttaaaaacacatttatcatctctttcaccatttcactattcgctctcattttctgggcaccaattctgcaagctgttatatt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 137896 416 + 80904711 ttagagacagggtcttgctctaaagaccttcgtgagc----cttgttcactaaagctggagtgcagtggcgtgatctcagctcactgccatctccac------cttccgggcaaacgtagtcctcccacctcggcctcccaaggagctgggactacaggcgtgcaccacgacgtccagctaatgttggtattttttttt----tttttcagagaaaatgtcttgccgtgtttccca----ggctggtctcaaactcctaggctcaagagatcctcctg-ctcagcttcccaaagtgttcggattagaggtgtgagctgccatacccagcctctcttacacctt----ttaattaattttt-aaaaacacatttatcatctctttcaccatttcactattctctctcattttctgggtacc-attctcctagctgttatatt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 143331 415 + 80997621 ttagagacagggtcttgctctaaagaccttcgtgagc----cttgttcactaaagctggagtgcagtggcgtgatctcagctcactgccatctccac------cttccgggcaaacgtagtcctcccacctcggcctcccaaggagctgggactacaggcgtgcaccacgacgtccagctaatgtttgta-tttttttt----tttttcagagaaaatgtcttgccgtgtttccca----ggctggtctcaaactcctaggctcaagagatcctcctg-ctcagcttcccaaagtgttcggattagaggtgtgagctgccatacccagcctctcttacacctt----ttaattaattttt-aaaaacacatttatcatctctttcaccatttcactattctctctcattttctgggtacc-attctcctagctgttatatt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 142589 406 + 74645514 ttagagacagggtcttgctctaaaGACCTTCATGAGC----CTTGttcactaaggctggagtgcagtggcacgatctcagctcactgccacctccac------ctcccgggcaaacgtggtcctcccacctcggcctcccaaggagctgggactacaggtgtgcaccacgacgcccagctaa----------ttttttt----ttttccagagaaaaaaTCTTGCcgtttttccca----ggctggtctcaaactcctaggctcaagagatcctcctg-ctcagcttcccaaagtgttgggattagaggtgtgagccgcCGTACCCAGCCTCTCTTACacctt----ttaagtaattttt-aaaaacacgttTATCATCTCTTTCACCATTTCActattctctctcattttctgggTACC-ATTGTCCTAGCTgttgtatt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 131009 411 + 75148670 ttagagacagggtcttgctctaaagaccttcgtgagc----cttgttcactaaggctggagtgcactggcgcgatctcagctcactgccacctccac------ctcccgggcaaaagtggtcctcccacctcagactcccaaggagctgggactacaggcatgcaccatgatgcccagataatttt-----tttttttt----tttttcagagaaaaaatcttgccgtgtttccca----ggctggtctcaaactcctaggcgcaagagatcctcctg-ctcagcttcccaaagtgttgggattagaggtgtgagccgccatacccagcctctcttacacctt----ttaattaattttt-taaaacacatttaccgtctctttcaccatttcactattctctctcattttctgggtacc-attctcctagctgttgtatt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 939631 431 - 1291538 ttagagacagggtcttgctctaaagacctcagtgagccttgcttgctcacaaaggctggagtgcagtgacacgatctcagctcacctccacctccacctccatctcccagaaaaaagcaatcctcccacctcaacctcccaagtagcagggactacaggcatgcaccacaatgcccagctaagtt------ttatattttttattttgcagagacaacgcctcaccatgtttcccaggctggctggtctcaaactcctaggctcaaatgatcttcccacctcagcttcccaaagtgttgggattacaggtgtgagccaccatacccagccTCTCTTATATCTTTGAATTAGTTAATTTTTAAAAAACACACGTATCAGCTCTTTCACAGTTTCACTATTCTCTCTCATTTTCTGGGTACCAATTCTC----CTGTTACATT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75872434 3195 + 122082543 I e canFam3.chr9 15699990 324 - 61074082 I a score=1806038.000000 s hg38.chr17_GL383563v3_alt 246256 613 + 375691 TTCCATTTCTCCCTCTTTTCTTAATGTGGCTGGTGgacaacaggggtagaatccacagaattttgagtgggaaagatcaggattaattgcattatctgtaaagtggtc-ttttttgtataaaggcaaaa---attctcagagagccaaggactcagaaaatgtatcatccatgcacccttatttttttaattacataaaattacagaccagctaattattagaaaaataaaa----taactcaagagtCTACAAGAAA---------ATAATCATTGATTTT--------CCTCCTAGAAATCCATTCTAAGGATAGAATCTAAAATGTAGACAGAGAGCTATGCACA------------------CAGTAATAAGAGAAAGAAATGAAAACAATTTAAATGTCCTCAATTAGGAG-AATATCTATATGACAGAAT------------GTTTACAAAGAGTTCTTGATTACACCGGAAAAGACTTAAGATA-----TTCATTTTAAAACACAGGTTCAATAATATAAAGAAAAAAGAcacagaaaaatggttgg-----aatatactaa-atattaacagtggttgtctct---------gattctggatttttggaaggtgtttatttatttatgcttgtctataattgtaaatgttcctcaatgatccatattaattttataatcag s panTro4.chr17 220909 613 + 82630442 TTCCATTTCTCCCTCTTTTCTTAATGTGGCTGGTGgacaacaggggtaaaatccacagaattttgagtgggaaagatcaggattaattgcattatctgtaaagtggtc-ttttttgtataaaggcaaaa---attctcagagagccaaggactcagaaaatgtatcatccatgcacccttatttttttaattacataaaattacagaccagctaattattagaaaaataaaa----taactcaagagtCTACAAGAAA---------ATAATcattgatttt--------cctcctagaaatccattctaaggatagaatctaaaatgtagacagagagctatgcaca------------------cagtaataagagaaagaaatgaaaacaatttaaatgtcctcaattagggg-aatatctatatgaCAGAAT------------GTTTACAAAGAGTTCTTGATTACACCGGAAAAGACTTAAGATA-----TTCATTTTAAAACACACGTTCAATAatataaagaaaaaagacacaggaaaatggttgg-----aatatactaa-atattaacagtggttgtctct---------gattctggatttttggaaggtgtttatttatttatgcttgtctataattgtaaatgttcatcaatgatccatattaattttataatcag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 108628 607 + 73212453 TTCCATTTCTCCCTCTTTTCTTAATGTGGCTGGTGgacaacaggagtaaaacccacagaattttgagtgggaaa------gattaattgcattatcagtaaagtggtc-ttttttgtataaaggcaaaa---attctcagatagccaaggactcagaaagtgtatcatccatgcacccttatttttttaattacataaaattacagaccagctaattattagaaaaacaaaa----taactcaagagtCTACAAGAAA---------ATAATCATCGatttt--------cctcctagaaatccagtctaaggatagagtctaaaatgtagacagagagctatgcaca------------------cagtaataagagaaagaaatgaaaacaatttaaatgtcctcaattaggag-aatagctatatgaCAGAAT------------GTTTACAAAGAGTTCTTGATTACACCGGAAAAGACTTAAGATA-----TTCATTTTAAAACATAGGTTCAATAATATAAAGAAAAAAGgcacagaaagatggttgg-----aatatactaa-atattaacagtggttgtctct---------ggttctggatttttagaaggtgtatatttctttatgcttgtctataattgtaaatgttcctcaatgatccatattaattttataatcag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 224479 614 - 81552678 ttccatttctccctcTTTTCTTAATGTGGCTGGTGgacaacaggggtaaaatccacagaattttgagcgggaaagatcaggattaattgcattatctgtaaagtggtctttttttgtataaaggcaaaa---attatcagatagccaaggactcagaaaatgtatcatccatgcacccttatttttttaattaaataaaattacagaccagctaattattagaaaaataaaa----taactcaagaGGCTACAAGAAA---------ATAATcattgatttt--------cctcctagaaatccattctaaggatagaatctaaaatatagacagagagttatgcaca------------------caataataagagaaataaatgaaaacaatttaaatgtcctcaattaggag-aatATCTGTATGACAGAAC------------GTTTACAAAGAGTTCTTGATCACACTGGAAAAGACTTAAGATA-----TTCATTttaaaacataggttcaataatataaagaaaaaaggcacagaaaaatggttgg-----aatacactaa-atattaacagtggttgtctct---------gattctggatttttggaaggtgtgtatttctttatgcttgtctataattgtaaatgttcctcaatgatccatattaattttataatcag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 138312 626 + 80904711 ttccatttctcCCACTTTTCTTCATGTGGCTGGTGgacaacaggggtaaaatccacagaattttgagtgggaaaaattaggattaattgcattaccagtgaagtggtc-ttttttgtataaaggcaaaa---attatcagatagccctggactcagaaaacgtatcatccatgcgcccttattttttaaattacataaaattatagaccagctaattcttagataaataaaaatagtaactcaagagtCTACAAGAAA---------ATAATcattgatttt--------ccttctagaaatccattcttaaggaagaatctaaagtggagacaaagagctatgcaca------------------cagtaataagag-aagaaatgaaaacaatttaaatgtcctcaattaggaa-aatATCTGTATGACAGAATATCAGCGAGAAAGTTTACAAAGAGTTCTTGATTACACCGGAAAAGACTTCAGATA-----TCCATTCtaaaacataggttcaataatataaagaaaaaaggcagagaacaatgattgg-----aatacactaa-at--ttccaatggttatctct---------gattctggatttttggaaggcgtgtacttctttatgcttgtctataattgtaaatgttcctcaatgatccatattaattttatcatcag i rheMac3.chr16 C 0 I 315 s macFas5.chr16 143746 626 + 80997621 ttccatttctcCCACTTTTCTTCATGTGGCTGGTGgacaacaggggtaaaatccacagaattttgagtgggaaagattaggattaattgcattaccagtgaagtggtc-ttttttgtataaaggcaaaa---attatcagattgccctggactcagaaaacgtatcatccatgcgcccttattttttaaattacataaaattatagaccagctaattcttagataaataaaaataataactcaagagtCTACAAGAAA---------ATAATcattgatttt--------ccttctagaaatccattctaaggatagaatctaaagtggagacaaagagctatgcaca------------------cagtaataagag-aagaaatgaaaacaatttaaatgtcctcaattaggaa-aatatctgtatgacagaatatcagcgagaaagtttacaaagagttcttgattacaccggaaaagacttcagata-----tccattctaaaacataggttcaataatataaagaaaaaaggcagagaacaatgattgg-----aatacactaa-at--taccaatggttatctct---------gattctggatttttggaaggcatgtacttctttatgcttgtctataattgtaaatgttcctcaatgatccatattaattttatcatcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 142995 626 + 74645514 ttccatttctcctgcTTTTCTTCATGTGGCTGGTGGACAACAGGGGTAAAATCCACAGAATTTTAAGTGGGAAAGACTAGGATTAATTGCATTACCAGTGAAGTGGTC-TTTTTTGTATAAAGGCAAAA---AGTATCAGATACCCCTGGACTCAGAAAACGTACCATCCATGCacccttattttttaaattacataaaattatagacCAGCTAATtcttagataaataaaaataataactcaaGGGTCTACAAGAAA---------ATAATCATTGATTTT--------CCTTCTAGAAATCCATTCTAAGGATAGAATCTAAAATGGAGACAAAGAGCTATGCACA------------------CAGTaataagag-aagaaatgaaaacaatttaaatgtcctCAATTAGGAA-AATATCTGTATGACAGAATATCAGCGAGAAAGTTTACAAAGAGTTATTGATTACACCAGAAAAGACTTGAGATA-----TCCATTCTAAAACACAGGttcaataatataaagaaaaaaggcagagaacAATGATTGG-----AATACACTAA-AT--TTCCAACGGTTATCTCT---------GATTCTGGATTTTTGGAAGGTGTGTACTTCTTTATGCTTATCTGTAATTGTAAATGTTCCTCAATGATCCGTATTAATTTTATCATCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 131420 627 + 75148670 ttccatttctcCCGCTTTTCTTCATGTGGCTGGTGgacaacaggggtaaaatccacagaattttgagtgggaaagattaggattaattgcattaccagtgaagtggtc-ttttttgtataaaggcaaaa---attatcagatagccctggactcagaaaacgtaccatccacgcgcccttattttttaaattacataaaattatagaccagctaattcttagataaataaaaataataactcaagagtCTACAAGAAA---------ATAATcattgatttt--------ctttctagaaatccattctaaggatagaatctaaaatggagacaaagagctatgcaca------------------cagtgataagag-aagaaatgaaaacaatttaaatgtcctcaattaggaa-aatatctgtaggacagaatatcaacgagaaagtttacaaagagttcttgattacaccagaaaagacttaagata-----tccattctaaaacataggttcaataatacaaagaaaaaaggcagagaacaatgattgg-----aatatactaa-ata-ttccaatggtggtctct---------gattctggatttttggaaggtgtatacttctttatgcttgtctataattgtaaatgttcctcaatgatccatattaattttatcatcag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 940062 523 - 1291538 TTCCATTTCTCCCA------------------------------------------------------------------GATTAACTACATTATcagtaaagtggtc-tttcttatataaaggcaaaa---tttatcagataaccaaggactcagaaaatgtatcatctgtgcgca-----ttttttaattacataaaattatacaccagctaattattaaataaataaaaataataactcaagagtCTCCAAGAAA---------ATaatc----atttt--------ccttctagaaatccattctgaggatacaatctaaaatgcagacaaagagctatgcaca------------------cagtaaaaagag-aaaaaatggaaacaatttaaatgtccTCAATTAG----AATATCTA----ATGAGGT------------GTTTACAAAGAGTTCTTCATTACACTGGGAAAGACttaaaata-----tgcatttaagaacgtaggttcaataacataaagaa------catagaaaaa----tgg-----aatacatgaa-atattaacagtggttgttttg---------gattccagatttttagaaggtgtgtatttctttatgcttgtctataattgtaaatgttcctcaatga-ccatattaattttataaccag i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15700314 588 - 61074082 ctcccctgctctctctttatcaaat-----------------------------aaatatttttga------------aaaaTTAAA----------------------------GAATaaaagcaagagttattattagatagcaaaagactcagaaaac--accatccatgtgcccttatttac--aattacataaaattatataccagctaattattggatgaatcaaaatagtaacttgagaGCCTATAAGAAAAGAGGGAATATAAATGCTGGTGTTTATTttccccttctaagaacccattctgaggatataatttaaaatttaggcaaagagttgtgtacagatgtatactgcggttgttaaaaagaaggg-aaaaaaaggaagtaacttagatatccTAAATTAAAAGAAATAGCCATATGGCAGAAT------------ATTTACAAAGAGTTACTGATTATTTTGG-AACTACTTACGATATAATGTTAATTTTAAAACACAGGTTCAATAATATAAagaaaaaaagt-cagaaaaaaagtcagaagtaaacatgccaagatgttagcagtgattgtctctgaatcataagattttcgatttgggggatatttctgttttttaatac---------actgtaaatg----tcaatgattcatattaatttcataatcag i canFam3.chr9 I 324 C 0 e mm10.chr11 75872434 3195 + 122082543 I a score=124084.000000 s hg38.chr17_GL383563v3_alt 246869 43 + 375691 aaaagaGTAAAATGTAGAGAGTAGATGTT----AAAAAATGAAAACT s panTro4.chr17 221522 43 + 82630442 aaaagaGTAAAATGTATAGAATATATGTT----AAAAAATGAAAACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 109235 41 + 73212453 aaaagaGTAAAATGTATAGAAT--ATGTT----AAAAAATGAAAACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 225093 43 - 81552678 aaaagaGTAAAATGTATAGAATATATGTT----AAAAAATGAAAAGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 139253 45 + 80904711 AAAAGAGTAACATGTATAGAATATATGTT--AAAAAAAATGAAAACT i rheMac3.chr16 I 315 C 0 s macFas5.chr16 144372 44 + 80997621 aaaagaGTAACATGTATAGAATATATGTT---AAAAAAATGAAAACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 143621 44 + 74645514 AAAAGAgtaaaatgtatagaaaatatgtt---aaaaaaatgaaaact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 132047 47 + 75148670 aaaagaGTAAAATGTATAGAATATATATTAAAAAAAAAATGAAAACT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 940585 38 - 1291538 aaaagagaaAAGTGTATA-----TATGTT----AAAAAATGAAAACT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15700902 43 - 61074082 aaaagaGTAAAATGTATATA----ATGTTTCAAAAAAAAGGAAAACT i canFam3.chr9 C 0 I 341 e mm10.chr11 75872434 3195 + 122082543 I a score=420619.000000 s hg38.chr17_GL383563v3_alt 246912 140 + 375691 TCCAAAGGTAACAACAGATAAGAACTTAAATATCTGGGCAATATTAAATAAGAAAAATAAAATACTATGCTACTGGCTTTGAGATAGTctacagtttatcctcagcaca--gcagacagagtacccttt-aaaagagggggag s panTro4.chr17 221565 140 + 82630442 TCCAAAGGTAACAACAGATAAGAACTTAAATATCTGGGCAATATTAAATAAGAAAAATAAAATACTATGCTACTGGCTTTGAGATAGTctacagtttatcctcagcaca--gcagacagagtacccttt-aaaagagggggag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 109276 140 + 73212453 TCCAAAGGTAACAACAGACAAGAACTTAAATATCTGGGCAATATTAAATAAGAAAAATAAAATACTATGCTACTGGCTTTGAGATAGTctacaatttatcctcagcaca--gcagccagagtacccttt-aaaagagggggag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 225136 139 - 81552678 TCCAAAGGTAACAACAGATAAGAACTTAAATATCTGGGCAATATTAAATAAG-AAAATAAAATACTATGCTACTGGCTGTGAGAGAGTccacagtttatcctcagcaca--gcagccagagcacccttt-aaaagagggggag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 139298 139 + 80904711 TCCAAAGATTATAACAGACAAGAACTTATGTATCTGGGCGATATTAAATAAGAAAAAT-AAATACTGTGCTACTGGCTTTGAGATAGTctgcaatttattctcaacaaa--gcagccagagcacccttt-aaaagagggggag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 144416 139 + 80997621 TCCAAAGATTATAACAGACAAGAACTTATGTATCTGGGCGATATTAAATAAGAAAAAT-AAATACTGTGCTACTGGCTTTGAGATAGTctgcaatttattctcaacaaa--gcagccagagcacccttt-aaaagagggggag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 143665 139 + 74645514 tccaaAGATTATAACAGACAAGAACTTACGTATCTGGGcgatattaaataagaaaaat-aaatactgtgcTACTGACTTTGAGATAGTCTGCAGtttattctcaacaca--gcagccagagcacCCTTT-AAAAGAGGGGGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 132094 140 + 75148670 TCCAAAGGTAACAACAGACAAGAACTTATGTATCTGGGCGATATTAAATAAGAAAAATAAAATACTGTGCTACTGGCTTTGAGATAGTctgcagtttattctcaacaca--gcagccagagtacccttt-aaaagagggggag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 940623 137 - 1291538 TCCAAAGGTAACAACAGAGAAGAACTTATATATCAAGACAATATTAAATAAGAAAAGTAAAATACTGTGTTGCTGGCCTTGAGATAGTctgcgaattactctcagcaca--gcagtcagagtaccctt----agaagaggggg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15701286 123 - 61074082 TCTGAGAGTAACAACAGCTAAGAACTTAAATAACA---------TGATTAGGAGAGATGAAACA--------CTGACATT---ATAGTACATGAtttattctcaaaacaatatagccagagcatcctttaaaaagagggagag i canFam3.chr9 I 341 I 300 e mm10.chr11 75872434 3195 + 122082543 I a score=647870.000000 s hg38.chr17_GL383563v3_alt 247052 229 + 375691 atcggattctgtctccgctttactcaagaccctccaagggcgcctcattttactgaatataaaaccaaagtcttggccaggtgtagtggctcacgcctgtaatctcagcacgttgggagactggggcaggtggatttgcttgagctcaggagtttgagaccagcctgggcaacatggcaaaaccccgtctctacaaaaatgcaaaaaattagctgggcgtggtggtaca s panTro4.chr17 221705 228 + 82630442 atcggattctgtctccgctttactcaagaccctccaagggcacctcattttactgaatataaaaccaaagtcttggccaggtgtagtggctcacgcctgtaatcccagcactttgggagactggggcaggtgga-ttgcttgagctcaggagtttgagaccagcctgggcaacatggcaaaaccccgtctctacaaaaatgcaaaaaattagctgggcgtggtggtaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 109416 228 + 73212453 atcggattctgtctctgctttactcaagaccctccaagggcgcctcattttactgagtataaaaccaaagtcttggccaggtgtaatggctcacgcctgtaatcccagcactttgggagactggggcaggtgga-ttgcttgagctcaggagtttgagaccagcctgggcaacatggcaaaaccccatctctacaaaaatgcaaaaaattagctgggtgtggtggtata i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 225275 228 - 81552678 gtcggattctgtctccgctttactcaagaccctccaagggcacctcattttactaagtataaaaccaaagtcttggccgggtgtagtggctcacgccttccattccagcactttgggagactggggcgggtgga-ttgctcgagctcaggagtttgagaccagcctgggcaacatggcaaaaccccgcctctacaaaaatgcaaaaaattagctgggtgtggtggtaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 139437 228 + 80904711 atgggagtctgtctccgctttcctcaagaccctccaagggcacctcattctcctgagtgtaaaaccaaagtcttggccaggtgcagtggctcacgcctgaaatcccagcacttcgggagactggggcaggcaga-ttgcctgagctcaggagtttgagaccagcctgggaaacatggcaaaaccccatctctacaaaaatacaaaaaattagctggacgtggtggtaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 144555 228 + 80997621 atgggattctgtctccgctttcctcaagaccctccaagggcacctcattctcctgagtgtaaaaccaaagtcttggccaggtgcagtggctcacgcctgaaatcccagcacttcgggagactggggcaggcaga-ttgcctgagctcaggagtttgagaccagcctgagaaacatggcaaaaccccgtctctacaaaaatacaaaaaattagctggacgtggtggtaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 143804 228 + 74645514 ATGGGATTCTGTCTCTACCTTACTCAAGACCCTCCAAGGGCGCCTCATTTTCCTGAGTGTAAAACCAaagtcttggccaggtgcagcggctcacgcctgaaatcccagcacttcgggagactggggcaggcaga-ttgcctgagctcaggagtttgagaccagcctgggcaacatggcaaaaccccatctctacaaaaatacaaaaaattagctggacgtggtggcaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 132234 227 + 75148670 atgggatt-tgtctctgctttcctcaagaccctccaagggcgcctcattttactgagtgtaaaaccaaagtcttggccaggtgcagtggctcacgcctgaaatcccagcacttcgggagactggggcaggcaga-tctcttgagctcaggagtttgagaccagcctgggcaacatggcaaaaccccgtctctacaaaaatacaaaaacttagctggacgtggtggtaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 940760 198 - 1291538 gtcagattctgt-----------------------------gcctcattttactgagtataaaaccagagtcttggccaagtgtggtggctcatgcctgtaaccccagcacttttggtgactgggacaggtgga-ttgcttgagctcaggagtttgagacctgcctgagcaacatggcaaaaccccgtctctac-aaaatacaaaaaatcagctgggtgtggtggtaca i calJac3.chrUn_GL286409 C 0 I 304 e mm10.chr11 75872434 3195 + 122082543 I e canFam3.chr9 15701409 300 - 61074082 I a score=1121412.000000 s hg38.chr17_GL383563v3_alt 247281 447 + 375691 gcctgtagtcccagctattcgggaggctgaggggggagggttgtttgagccctgaaggcagaggttgcagtgagctgagatcgtggcactgccctacagcctgggtgacacagtgagatcctgtctc-aaaaaaacaaaacaaataaaaaaaaccccgaaaccc-taagtccttacaaaggtctctaagcacc-aacatgg----------------------------------tctgacccactctatcgtaactctgatgatacagtttggctgtgtccccacccaaatctcatcttgaactgcagctcccataattcccaagtgttgtgggagggacccagtgggaggtaattgaatcatgggggcggttccctccatactgttctcgtgatagtgaatgagtctcacgagatctgatggttttataagaagaaactcctttcacttggtctcattctttctttgcctgccgccatgtaa s panTro4.chr17 221933 446 + 82630442 gcctgtagtcccagctattcgggaggctgaggggggagggttgtttgagccctgaaggcagaggttgcagtgagctgagatcgtggcactgccctacagcctgggtgacacagtgacatcctgtctc-aaaaaaacaaaacaaac-aaaaaaaccccgaaaccc-taagtccttacaaaggtttctaagcacc-aacatgg----------------------------------tctgacccactctatcatatctctgatgatacagtttggctgtgtccccacccaaatctcatcttgaactgcagctcccataattcccaagtgttgtgggagggacccagtgggaggtaattgaatcatgggggcggttccctccatactgttctcgtgatagtgaatgagtctcacgggatttgatggttttataagaagaaactcctttcacttggtcccattctttctttgcctgccgccatgtaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 109644 447 + 73212453 gcctgtagtcccagctattcaggaggctgaggtgggagggttgtttgagccctgaaggcagaggttgcagtgagctgagatcgtggcactgccctacagcctgggtgacacagtgagatcctgtctcaaaaaaaacaaaacaaac-aaaaaaaccccaaaaccc-aaagtccttacaaaggtctctaagcacc-aacatgg----------------------------------tctgacccactctatcatatctctgatgatacagtttggctgtgtccccacccaaatctcatcctgaactgtagctcccataattcccaagtgttgtgggagggaccaagtgggaggtaattgaatcatgggggcggttccccccatactgttctcgtgatagtgaataagtctcaggagatctgatggttttataagaagaaactcctttcacttggtctcattctttctttgcctgccgccatgtaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 225503 395 - 81552678 gcctgtagtcccagctattcgggaggctgagatgggagggttgtttgagccctgaaggcagaggttgcagtgagctgagatcgtggcactgccctacagcctgggtgacacagtgagatcctgtctc-aaagaaacaaaac-----aaaaaaaccccaaaacccaaaagtccttacagaggtctctacgcaccaaacatgg----------------------------------tctgaccccctctatcctatctctgacgatacagttgggtggtgtccccaccccaatctcatcttgaac------------------------------------------------taattgaatcatgggggcggttccc-ccatactgttctcgtgatagtgagtaagtcccatgagatccgatggttttataagaagaaactcctttcacttggtctcattctttctttgcctgccgccatgtaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 139665 443 + 80904711 gcctgcagtcccagctatttgggaggctgaggtgggagggttgtctgagccctgaaggcagaggttgcagtgagctgagattgtggcactgccctacagcctgggtgacccagtgagatcctgtctc-agaaaaacaaagtaaac-aaacaactttcaaaaccc-aaagtccttacaaaggtctctaagcact-gacacga----------------------------------tctgacccaccctatcatgtctctgacgatatggtctggctgtgtccccacccaaatctcatcatgaactgtagctcccataattcccacgtgctgtgggagcgaccgagtgggaggtaactgaactgagggggcggtttcccgcagaccattctcgtggtagtgactaagtgtcacgagatctgatgtttttat---aagaaactcctttcacttggtctcattgtttctttgtctgccgccgtgtaa i rheMac3.chr16 C 0 I 584 s macFas5.chr16 144783 443 + 80997621 gcctgcagtcccagctatttgggaggctgaggtgggagggttgtctgagccctgaaggcagaggttgcagtgagctgagattgtggcactgccctacagcctgggtgacccagtgagatcctgtctc-agaaaaacaaagtaaac-aaacaactttcaaaaccc-aaagtccttacaaaggtctctaagcact-gacacga----------------------------------tctgacccaccctatcatgtctctgacgatatggtctggctgtgtccccacccaaatctcatcatgaactgtagctcccataattcccacgtgctgtgggagcgaccgagtgggaggtaactgaactgagggggcggtttcccgcagaccattctcgtggtagtgactaagtgtcacgagatctgatgtttttat---aagaaactcctttcacttggtctcattgtttctttgtctgccgccgtgtaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 144032 480 + 74645514 gcctgcagtcccagctatttgggaggctgaggtgggagggttgtctgagccctgaaggcagaggttgccgtgagctgagatcgtggcactgccctacagcctgggtgacccagtgagatcctgtctc-agaaaaacaaagtaaac-aaacGACTTTCAAAACCC-AAAGTCCTTACAAAGGTCTCTAAGCACC-GACACGATCTGACCCACAAAGGTCTCTAAGCACCGACACGCTCTGACCCACCCTATCATGTCTCTGacgatatggtctggctgtgtccccacccatatctcatcatgaactgtagctcccataattcccacgtgctgTGGGAGCGACcgagtgggaggtaattgaactgAGGGGGCGGTTTCCCGCAGAGCGTTCTCGTGGTAGTGACTAAGTGtcacgagatctgatgtttttataagaagAAACTCCTTTCACTTggtctcattctttctttgcctgcCGCCGTGTAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 132461 446 + 75148670 gcctgcagtctcagctatttgggaggctgaggtgggagggttgtctgagccctgaaggcagaggttgcagtgagctgagatcgtggcactgccctacagcctgggtgacccagtgagatcctgtctc-agaaaaacaaagcaaac-aaacaactttcaaaaccc-aaagtcctcacaaaggtctctaagcacc-gacacga----------------------------------tctgacccaccctatcacgtctctgaccatatggtctggctgtgtccccacccacatctcatcttgaactgtagctcccgtaattcccacgtgttgtgggagcgaccgagtgggaggtaattgaactgaggggccggtttcccccagaccgttctcgtggtagtgactaagtgtcacgagatctgatgtttttataagaagaaactcctttcacttggtctcattctttctttgcctgccgccgtgtaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 941262 387 - 1291538 acctgtagccccagctatttgggaggctgaagtgggagggttgtttgagccctgaaggcagaggttgcagtgagctgagatcgtgtcattgcactacagcctgagtgac--------------------------------------------------------atagtccttccaaaggtctcgaagcacc-agcatgg----------------------------------tcaga-gcaccctgtcatatctctgctgatacagcttggctgtgtcctaacccaaatcttatcttaaattgt-tctcccataattcccaggtgttgtcggaggaacctggtgggagacaattgaatcacaggggtgggtgcccccagactattctcatgataatgggtaagtctc-tgaggtctgctggtttcataaggagaaa---ctttcacttggtcacattctttctttgcctgccaccatggaa i calJac3.chrUn_GL286409 I 304 C 0 e mm10.chr11 75872434 3195 + 122082543 I e canFam3.chr9 15701409 300 - 61074082 I a score=291720.000000 s hg38.chr17_GL383563v3_alt 247728 134 + 375691 gacgtgcctttcgccttccgccgtgattgtgaggcctccccagccatgtggaaccgtgagtccatcaagcctcttcccttt---agtacccagtctcaggtatgtgtttattagcagcatgagaacagactaataca s panTro4.chr17 222379 137 + 82630442 gacgtgcctttcgccttccgccgtgattgtgaggcctccccagccacgtggaaccatgagttcatcaagcctcttccctttataattacccagtctcaggtatgtgtttattagcagcatgagaacagactaataca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 110091 136 + 73212453 gatgtgcctttcgccttctg-catgattgtgaggcctccccagccacgtggaactgtgagtccatcaaacctcttccctttataattacccagtctccggtatgtgtttattagcagcatgagaacagactaataca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 225898 137 - 81552678 gacgtgcctttcaccttcagccatgattgtgaggcctccccagccacgtggaagtgtgagtccatcaaacctcttccctttatgattacccagtctcaggtatgtgtttattagctgcatgagaacagactaataca i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 145226 137 + 80997621 aacgtgccttctgccttccgccatggttgggaggcctccccgggcatgtggaactgtgagtccatcaaatctcctccctttataattacccagtctcaggtacgtctttatcagcagcgagagaacagactaataca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 144512 137 + 74645514 AACGTGCCTTCTGCCTTCCGCCATGGTTGGGAGGCCTCCCcgggcatgtggaactgtgagtccatcaaaTCTCCTccctttataattacccagtctcaggtacgtctttatcagccgcgtgagaacagactaataca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 132907 137 + 75148670 gacgtgccttccgccttccgccatggttgggaggcctccccgggcatgtggaactgtgagtccatcaaatctcctccctttataattacccagtctcaggtacatctttatcagcagcgtgagaacagactaatata i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 941649 137 - 1291538 gacatgcctttcacattctgccatgattgtgaagcctccccagccatgtggaactgtgagtccattaaacctttgccctttataatcacccagtcacaggtatgtcttgattagcagcctaagaacagactaataca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75872434 3195 + 122082543 I e canFam3.chr9 15701409 300 - 61074082 I e rheMac3.chr16 140108 584 + 80904711 I a score=35833.000000 s hg38.chr17_GL383563v3_alt 247862 13 + 375691 tctgacaacctct s panTro4.chr17 222516 13 + 82630442 tctgacaacctct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 110227 13 + 73212453 tctgacaacctct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226035 13 - 81552678 tctgacaacccct i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 145363 13 + 80997621 tctgacgacccct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 144649 13 + 74645514 tctgACAACCCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 133044 13 + 75148670 tctgacaacccct i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 941786 13 - 1291538 tctgacaacctct i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75875629 13 + 122082543 tttaacctcctct i mm10.chr11 I 3195 C 0 e canFam3.chr9 15701409 300 - 61074082 I e rheMac3.chr16 140108 584 + 80904711 I a score=612081.000000 s hg38.chr17_GL383563v3_alt 247875 251 + 375691 ccccagccccaacttaac-------tcaagtcacactggtctcctcgctgtgcctcagatctaccaagcacacacatctg-cctcggggcctttgcacct--gctgctttgcaccc-ctac---ttggaatgctttccctccacatagccacagaagatgcttcagatctccattcaaaagtcattttgtcggtgggcccctctcttatccccatataaa--ccagcaactgccccagtgtccccagcaccccttct-ccctttgccc s panTro4.chr17 222529 252 + 82630442 ccccagccccaacttaac-------tccagtcacactggtctcctcgctgtgcctcagatctaccaagcacacacatctg-cctcggggcctttgcacct--gctgctttgcaccc-ctac---ttggaatgctttccctccacatagccacagaagatgcttcagaccttcactcaaaagtcattttgtcggtgggcccctcttttatccccatataaa--ccagcaactaccccagtgtccccagcaccccttctcccctttgccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 110240 247 + 73212453 ccccagccccaacttaac-------tccagtcacactggtctcctagctgtgcctcaaatctaccaagcacacacatctg-cctcggggcctttgcacct--gc-----tgtaccc-ctac---ttggaatgctttccctccacatagccacagaagatgcttcagatctccactcaaaagtcattttgtcagtgggcccctctcttatccccatataag--ccagcaactaccccagtgtccccagcaccccttctcccctttgccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226048 246 - 81552678 ccccag-cccaacttaac-------tccagtcacactggtctcctagctgtgcctcaaatctaccaagcacacacatctg-cctcggggcctttgcacct--gc-----tgcaccc-ctac---ttggaatgctttccctccacatagccacagaagatgcttcagatctccactcaaaagtcgttttgttagtgggcccctctcttatccccatataaa--ccagcaactaccccagtgtccccagcaccccttctcccctttgccc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 145376 246 + 80997621 ccctagccccaacctaac-------tccagccacgctggtctccgcgctgcgcctccaatctgccgagcacacacgtctg-cctcggggcccttgcaccc--gt-----tgcaccc-ctac---ttggaatgcttcccctccacatagccacagaagatgcttcagatctctgctcaaacgtcgttttgtcagtgggcccctccctggtccccatgtaag--ccagcagccacgccagtgtccccagcacctcttctcccctttgcc- i macFas5.chr16 C 0 I 1 s papAnu2.chr16 144662 225 + 74645514 CCCTAGCCCCAACCTAAC-------TCCTGCCACGCTGGTCTCTGCGCTGTGCCTCCAATCTGCCGAGCACACACGTCTG-CCTCGGGGCCCTTGCACCT--GT-----TGCACCC-CTAC---TTGGAATGCTTCCCCTCCACATAGCCACAGAAGATGCTTCAGATCTCTGCTCAAACGTCGTTTTGTCAGTGGGCCCCTCCCTGGTCC-----------------------CCAGTGTCCCCAGCACCTCttctcccaccaccc- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 133057 246 + 75148670 cccgagccccaacctaac-------tccagccacgctggtctccgtgctgtgcctccaatctgcggagctcacacgtctg-ccttggggcctttgcacct--gt-----tacaccc-ctac---ttggaatgcttcccctccacacagccacagaagatgcttcagatctctgctcaaacgtcgttttgtcagtgggcccctccccgatccccatgtaag--ccagcagccacgccagtgtccccagcacctcttctcccctttgcc- i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 941799 236 - 1291538 ccccagccacaactaaac-------cccagtcacactggtctcctcgctgtgcctcaaacctaccaagcgcacacatctg-cctcagggtctttgcacct--gc-----tctaccc-ctgc---ttggaatgctttctctccacacagccacagaaggtgcttcagatctccactcagaagtca-tttgtcagtgagcccctccctgatccccatataaa--atagcaa---------tgtccct-gcatcccttctcccctttgccc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75875642 227 + 122082543 cttcaaccttgacccagc-------tcctggtcccttggtctccccact------------------caacacacatccaccctcagggcctttgcacacaagc-----atctccc-cgacactctgcaacatttcccctc--catggccacagagtattcctcagttctttgtgcaaatgtcattttatcagtggtcccctccctggactctgtagtga--ataggag-----ccactgtttccagtatctctttccccatttcct- i mm10.chr11 C 0 I 30 s canFam3.chr9 15701709 235 - 61074082 ccctggccttactctgacctcctcatccagtcacactggtctccttgctgctcctcaaacccaccaaggacacac--cta-cttcagggcctttgcactc--ac-----tgtaccctccac---ttggaatatgttccgatcacatagccacatagtgt--------------ctccaacgtcatcttgtcagtaagcccttccctgactcccatgtaaaatatagcagcta--ccaatgttttcagcacc----ctgctctttgtcc i canFam3.chr9 I 300 C 0 e rheMac3.chr16 140108 584 + 80904711 I a score=303517.000000 s hg38.chr17_GL383563v3_alt 248126 139 + 375691 taaggacttgatcaccgtctgtg---acactgcagaatttact-----gggtttgtggtctcc----------------------ctctcccattggaagagctattttgcctggcacataggaggtgctcaataaat--gt--gtcagctgcctacatgaatAAACGCATTT s panTro4.chr17 222781 139 + 82630442 tgaggacttgatcaccgtctgtg---acactgcagaatttgct-----gggtttgtggtctcc----------------------ctctcccattggaagagctattttgcctggcacataggaggtgctcaataaat--gt--gtcggctgcctacatgaatAAACGCGTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 110487 139 + 73212453 taaggacttgatcactgtctgtg---acactgcagaatttact-----gggtttgtggtctcc----------------------ctctcccactggaagagctattttgcctggcacataggagatgctcaataaat--gt--gtcggctgcctacatgaatAAATGCATTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226294 139 - 81552678 tgaggactcgatcaccgtctgtg---acactgcagaacttact-----gggtttgtggtctcc----------------------ctctcccactggaagagccattttgcctggcacataggagatgctcagtaaat--gt--gtcggctgcctacataaatAAACGCATTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 145623 139 + 80997621 caaggccttgaccaccgtctgtg---actctgcagaatttatg-----gggtttgtggtctcc----------------------ctctcccactggaagaactgttttgcctggcacataggagatgctcaataaac--gt--gtcagctgcctgtgtgaatAAATGCATTT i macFas5.chr16 I 1 I 295 s chlSab2.chr16 133304 139 + 75148670 caaggccttgatcaccgtctgtg---actctgcagaattgacg-----gggtttgtggtctcc----------------------ctctcccactggaagaactgttttgcctggcacataggagatgctcaataaac--gt--gtcagctgcctatgtgaatAAATGCATTT i chlSab2.chr16 I 1 I 294 s calJac3.chrUn_GL286409 942035 139 - 1291538 taaggacttgctcaccacttgtg---acattgcagaatttact-----gggtttgtggtctcc----------------------ctctcccactggaaGAGCTACTTtgcctggcatataggagatgctcaataaat--tt--gtCACCTGCCTATGTGAATAAATGCATTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75875899 166 + 122082543 ggatcacattatccccatctgagggtacaagatatacctttct-----gtgtttatggctcccccacactGCCCCCCCCCATCCACTTTTTCAGTATAAGAGCTGTCTAACCTGGCCCATAGAAGATGCTTAATAAAT--ATACACCAAATGCCCAAACAAATGAATGGATTA i mm10.chr11 I 30 C 0 s canFam3.chr9 15701944 145 - 61074082 tgagcattttgtcaccatctgta---acatgccagaatttactttagggtgtctgtgatctcc----------------------tttccccacaag-agagttattttgcctggcacatagaagatgctcaataaatacgt--gttgaatgcttgaatAAATATATGCATTA i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C e rheMac3.chr16 140108 584 + 80904711 I a score=-9414.000000 s hg38.chr17_GL383563v3_alt 248265 6 + 375691 -------GACTGC----------------------------------------------------------------------------------- s panTro4.chr17 222920 6 + 82630442 -------GACCGC----------------------------------------------------------------------------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 110626 6 + 73212453 -------GACTGC----------------------------------------------------------------------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226433 6 - 81552678 -------GACTGC----------------------------------------------------------------------------------- i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 942174 6 - 1291538 -------GACTGC----------------------------------------------------------------------------------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75876065 6 + 122082543 -------GGTTGT----------------------------------------------------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15702089 96 - 61074082 GATTAGGGACTGCATggcagcccgggtggctcagcagtttagcgccgccttcagcccagggcctgatcttggagacctgggatcgagtcccatgtc i canFam3.chr9 C 0 C 0 e chlSab2.chr16 133443 294 + 75148670 I e papAnu2.chr16 144887 0 + 74645514 C e rheMac3.chr16 140108 584 + 80904711 I e macFas5.chr16 145762 295 + 80997621 I a score=3767.000000 s hg38.chr17_GL383563v3_alt 248271 2 + 375691 AG s panTro4.chr17 222926 2 + 82630442 AG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 110632 2 + 73212453 AG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226439 2 - 81552678 AG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 146057 2 + 80997621 AA i macFas5.chr16 I 295 C 0 s calJac3.chrUn_GL286409 942180 2 - 1291538 AG i calJac3.chrUn_GL286409 C 0 I 2 s mm10.chr11 75876071 2 + 122082543 AA i mm10.chr11 C 0 C 0 s canFam3.chr9 15702185 2 - 61074082 ag i canFam3.chr9 C 0 C 0 e chlSab2.chr16 133443 294 + 75148670 I e papAnu2.chr16 144887 0 + 74645514 C e rheMac3.chr16 140108 584 + 80904711 I a score=43739.000000 s hg38.chr17_GL383563v3_alt 248273 51 + 375691 GCTCCC-----------------------------------------------------------------------------------------AAAGCAGATGGGCTGAGGCTCACACTGCCGCCTGGTGAAAGGGCA s panTro4.chr17 222928 51 + 82630442 CCTCCC-----------------------------------------------------------------------------------------CAAGCAGACAGGCCGAGGCTCACACTGCCGCCTGGTGAAAGGGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 110634 51 + 73212453 GCTCCC-----------------------------------------------------------------------------------------AAAGCAGATGGGCTGAGGCTGACACTGCTGCCTGGTGAAAATGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226441 51 - 81552678 GCTCCC-----------------------------------------------------------------------------------------AGAGCAGACGGGCCGAGGCTCACATTGCTGCCTGGTGAAAGTGCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 146059 42 + 80997621 GCTCCC-----------------------------------------------------------------------------------------AAAGCAGAGGGGCCCGGGCTCAGATTCCCACCTGGT--------- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 133737 41 + 75148670 GCTCCC-----------------------------------------------------------------------------------------AAAGCAGAGGGGCCCAGGCTCAGATTGCCGCCTGG---------- i chlSab2.chr16 I 294 C 0 s calJac3.chrUn_GL286409 942184 51 - 1291538 TCCCCC-----------------------------------------------------------------------------------------AGAGCAGAGGGGCTGAGACTCACATTGCCACTCGGTGAAAGTGTA i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75876073 44 + 122082543 -ACTCA-----------------------------------------------------------------------------------------AAATCTGACAGCCTGAGACTCACATTGCCACTCACTACG------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15702187 140 - 61074082 gctccctgcagggagccggcttctccctctgcctgtgtctctgcctctctctctgtgtctctcatgaataaataaataaaatcttaaaaaaaaaAAAAGATTAGGGGCTGCAGTTCGCACTGCTGTACCACTGAGGTACA i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C e rheMac3.chr16 140108 584 + 80904711 I a score=253513.000000 s hg38.chr17_GL383563v3_alt 248324 95 + 375691 TAACACAGGCAGCAACACC-----ACCCTGACAGCCCCAGGAACATCTCACCAGCACTCAACTCGCTCCAGAAAAAAT-ACTT-ACAATTACAGCCAGAGAT s panTro4.chr17 222979 95 + 82630442 TAACACAGGCAGCAACACC-----ACCCTGACAGCCCCAGGAACATCTCACCAGCACTCAACTCGCTCCAGAAAAAAT-ACTT-ACAATTACAGCCAGAGAT i panTro4.chr17 C 0 I 208 s ponAbe2.chr17 110685 95 + 73212453 TAACACAGGCAGCAACACC-----ACCCTGACAGCCCCAGGAACATCTCACCAGCACTCGACTCGCTCCAGCAAAAAT-ACTT-ACAATTACAGCCAGAGAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226492 95 - 81552678 TAACACAGGCAGCAACACC-----ACCCTGACAGCCCCAGGAACATCTCACCAGCACTCGACTCGCTCCAGAAAAAAT-ACTC-ACAATTACAGCCAGAGAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 140692 95 + 80904711 TAACACAGGGAGCAACCCC-----ACCCTGACAGCCCCCGGAACATCTCACCAGCACTCAACTCACTCCAGAAAAAGT-ACGT-ACCATTCTGGCCAGAGAT i rheMac3.chr16 I 584 C 0 s macFas5.chr16 146101 94 + 80997621 -AACACAGGGAGCAACCCC-----ACCCTGACGGCCCCCGGAACATCTCACCAGCACTCAACTCACTCCAGAAAAAGT-ACGT-ACCATTCTGGCCAGAGAT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 133778 95 + 75148670 TAACACAGGGAGCAACCCC-----ACACTGACGGCTCCCGGAACATCTCACCAGCACTCAACTCACTCCAGAAAAAGT-ACGT-ACCATTCTGGCCAGAGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 942235 96 - 1291538 TACAACAGGCAGCAACATC-----CCCCTGACAGCCCCAAAAATGTCTCACCAGCACTTGACTCACTCCAGAAAAAGT-ACTTAACAATTACAGCCAGAGAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75876117 99 + 122082543 TCAGACAGACAGTAACACCGAGCTGCTCTGCTCACTCTAGG-ACATTCAGCCCACATTCGACCCACTTGAGAGAAATG-ACTT-GCAATTACAGCCAGGGCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15702327 85 - 61074082 TAAGGTGGGCAGCAA-ACC-----AACGTGACAGCCCCAGGGACATTTAACCAGTA----------TCCAGAAAAAATAACAT-ACAATTACAGTCAGAGAG i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=1158928.000000 s hg38.chr17_GL383563v3_alt 248419 467 + 375691 GATGGAAGTGAAGCAC-GAAAGGAAAGGAAGATAAGAGGCCTTGGGCAG-------------------------AATGCTCCAAGAGTTTTCATCAGAAAACCCAAGTTCTTCCATTAGGATTTGGCTTTTGCGGGGAGACATAACTCCAAATTTTCATCACAGACTCAGAACCA------------GCTTAAAATCTGACATTTTAAACGGCCTTTCTAGTTAGTTATCTCTTCATTATGATTAGACATTTTTCTAAGA---AGAAAGGGCATTAGGAAACCAATTACGCCAGCCTTCCCACACCCCACAAGCAGGCAGAAAAATCCAGCACATGGTTCTGGTACCCACAGGTACCCAGGCTCATATACCATGAACATGTTCCCAGCC---CCATCCA-------------TT---CCTGCTAACCGTGCACCATATGCCTGGTGCTGCAGAGAGGGAA-----TATCCTTGATCTTTTAGAGGCTAAGTTTTATCAGCCTCTAAAAATTCAAGGGCAAAGTAATAGCGTA s panTro4.chr17 223282 467 + 82630442 gatggaagtgaagcac-gaaaggaaaggaagaTAAGAGGCCTTGGGCAG-------------------------AATGCTCCAAAAGTTTATATCAGAAAACCCAAGTTCTTCCATTAGGATTTGGCTTTTGCGGGGAGACATAACTCCAAATTTTCATCACAGACTCAGAACCA------------GCTTGAAATCTGACATTTTAAATGGCCTTTCTAGTTAGTTATCTCTTCATTATGATTAGACATTTTTCTAAGA---AGAAAGGGCATTAGGAAACCAATTACGCCAGCCTTCCCACACCCCACAAGCAGGCAGAAAAATCCAGCACATGGTTCTGGTACCCCCAGGTACCCAGGCTCATATACCATGAACATGTTCCCAGCC---CCATCCA-------------TT---CCTACTAACCGTGCACCATATGCCTGGTGCTGCAGAGAGGGAA-----TATCCTTGATCTTTTAGAGGCTAAGTTTTATCAGCCTCTAAAAATTCAAGGGCAAAGTGATAGTGTA i panTro4.chr17 I 208 C 0 s ponAbe2.chr17 110780 462 + 73212453 GATGGAAGTGAAGCAC------AAAAGGAAGATAAGAGGCTTTGGGCAG-------------------------AATGCTCCAAGAGTTTTCATCAGAAAATCCAAGTTCTCCCATTAGGATTTGGCTTTTGCGGGGAGACAGAACTCCAAATTTTTATCACAGACTCAGAACCA------------GCTTAAAATCTGACATTTTAAATGGCCTTTCTAGTTAGTTATCTCTTCATTATGATTAGACATTTTTCTAAGA---AGAAAGGGCATTAGGAAACCAATTACACCAGCCTTCCCACACCCCATAAGCAGGCAGAAAAATCCAGCACCTGGGTCTGGTACCCACAGGTACCCAGGCTCATATACCATGAACATGTTCCCAGCC---CCATCCA-------------TT---CCTACTAACTGTGCACCATATGCCTGGTGCTGCAGAAAGGGAA-----CATCCTTGATCTTTTAGAGGCTAAGTTTTATCAGCCTCTAAAAATTCAAGGACAAAGTGATAGCGTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 226587 449 - 81552678 GATGGAAGTGAAGCAT-GAAAGGAAAGGAAGATAAGAGGCCTTGGGCAG-------------------------AATGCTCCAAGAGTTTTCATCAGAAAACCCAGGTTCTTCCATTAGGGTTTGGCTTTTGCAGGGAGACAGAACTCCAAATTTTTATCACAAACTCAGAACCA------------GCTTAAAATCTGACATTTTAAATGGCCTTTCTAGTTAGTTATCTCTTCATTATTATTAGACATTTTTCTAAGA---AGAAAGGGCATTAGGAAACCAATTATGCCAGCCTTCCCACACCCCACAGGCAGACAGAAAAATCCA-----------------CCACAGGTGCCCAGGCTCATATTCCATGAACATGTTCTCAGCC---CCGTCCA-------------TT---CCTACTAACTGTGCACCACGTGCCTGGTGCTGCAGAGAGGGGG-----CAT-CTTGATCTTTTGGAGGCTAAGTTTTATCAGCCTCTAAAAATTCAAGGACAAAGTGATAGCGTA i nomLeu3.chr19 C 0 I 270 s rheMac3.chr16 140787 436 + 80904711 GACAGAAGTGAAGCAC-GAAAGGACAGGAAGATAAGAGGCCTTGGGCAG-------------------------AGTGCTCCAAGAGTTTCCATCAGAAAACCCAAGTTCCTCCATTAGGATTTGGCTTTTGCGCGGAGACAGAACTCCACGTTTTTAT--CAGACTCAGAACCA------------GTTTAAAATCTGACATTTTAAATGGCCTTTCTAGTTCGTTATCTCTTCATTATGATTAGACATTCTTCTAAGA---AGAAAGGGCGTTAGGAAACCAATGACGCCGGCCTTCCCACACCCCAAAAGCAGACAGAAAAATCCAGCACGTGTCT--GGTACCCACAGGTACCCAGGCTCATATACCACGAACATGCTCCCGGCC---CCATCCG-------------TT---CCCGCTAACTGTGCAC--------------------------------CACCCTTGATCTTCTAGAGGCTGAGTTTTATCAGCTTCTAAAAATTCAAGGACAAAGTGATAGGGCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 146195 428 + 80997621 GACAGAAGTGAAGCAC-GAAAGGACAGGAAGATAAGAGGCCTTGGGCAG-------------------------AGTGCTCCAAGAGTTTCCATCAGAAAACCCAAGTTCCTCCATTAGGATTTGGCTTTTGCGGGGAGACAGAACTCCACGTTTTTAT--CAGACTCAGAACCA------------GTTTAAAATCTGACATTTTAAATGGCCTTTCTAGTTCGTTATCTCTTCATTATGATTAGACATTCTTCTAAGA---AGAAAGGGCGTTAGGAAACCAATGACGCCGGCCTTCCCACACCCCAAAAGCAGACAGAAAAATCCAGCACGTGTGT----------CTGGTACCCAGGCTCATATACCACGAACATGCTCCCGGCC---CCATCCG-------------TT---CCCGCTAACTGTGCAC--------------------------------CACCCTTGATCTTCTAGAGGCTGAGTTTTATCAGCTTCTAAAAATTCAAGGACAAAGTGATAGGGCA i macFas5.chr16 C 0 C 0 s chlSab2.chr16 133873 465 + 75148670 GACAGAAGTAAAGCAC-GAAGGGAAAGGAAGATAAGAGGACTTGGGCAG-------------------------AGTGCTCCAAGAGTTTTCATCAGAAAACCCAAGTTCTTCCATCAGGATTTGGCTTCTGCGGGGAGACAGAACTCCACATTTTTAT--CAGACTCAGAACCA------------GTTTAAAATCTGACATTTTAAATGGCCTTTCTAGTTCATTATCTCTTCATTATGATTAGACATTTTTCTAAGA---AGAAAGGGCGTTAGGAAACCAATGACGCCAGCCTTCCCACACCCCAAAAGCAGACAGAAAAATCCAGCACGTGTGTCTGGTACCCACAGGTACCCCGGCTCATATACCATGAACATGCTCCCGGCC---CCATCCG-------------TT---CCCGCTAACTGTGCACCACATGCCTGGTGCTGCAGAGAGGGAA-----CACCCTTGATCTTTTAGAGGCTAAGTTTTATCAGCTTCTAAAAATTCAGGGACAAAGTGATAGCGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 942331 421 - 1291538 GATGGAAGTGAAGCACCAAAGGGAAAGGAAGATAAGAGGGCTTGGGCAG-------------------------AGTGCTACAAGAGCTTTCATCAGAAAACCCAAGTTCTCCCATTAGGATCTGGCTTTTGCGGGGAGACAGAACTTTGAACTTTCATCACAGACTCAGAACCA------------GCTTAAAATCTGACATTTTAAATAGCC----------------------TTATGATTAGACACTTTTCTAAGA---AGAAAGGGCACTAGGAAACC-----CGCCAGTCTTTTTACATCCCAAACGCAGACAGAAAGATCCAGCACAT----------------AGTACCCAGGCTCAGATACCATGACTGTGCTCCCGGCC---CCATCCG-------------TT---CCTAACAAATGGCCACTGTTACACTGGTGCTGCAGAG-GGGAA-----CATTCTTGATCCTTTAGAGGTTGAGTTTT---AGCCTCTAAAAATTCAAGGACAAGGTGATAGTGTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75876216 500 + 122082543 GATGGAAGCTAGCCAG-GAGGAGATAG--AGATGAGTgccccgggggggggggggggggAGGTTAGGGGGAGGTAGCGGCACAAGAGTGTCCATCAG-CAACCCAAGTTCTTCTGTCACAATCTGCTCTCCGACGTGAGACACAACTCCAAATTCCCCTCAGAATCTCCAAATCAGCTATGCTCAGTGCTTAAAACACAGCACGTTAAATGTCCCTTCTCCCTCACTATCTCTTTGTTATGATTAGATATTTCTTGAAGAGAGAAAAAGGGCATTAGGAAACCAGTTGC-CCTGCCCCCACTCCCTGCCCAAGCAGACAGCAGACTCCAGCTTATGGGCGTGGCACCCACAGATG---------GTGAACCACGTTCATGTTCAGGACC---CTGTCTGAGTGCAGCAAGCCGG---CCGGGCAGCCTTGCAATCGCTTCCTGGAGCCACAGAG-GGGGA-----CCTTTTTGATCTT------GCTAAGCTTTATCGGCTCCTAAAGATTCAAGGACAAGTTGATAGCATA i mm10.chr11 C 0 C 0 s canFam3.chr9 15702412 464 - 61074082 GACAGAAGGGAAGCATCAAAAGGAAAGATAGACAGGAGTGTCTGGGCAT-------------------------AGCAGT--AAGAGTTTCCATTGGAAAATTCAAGTTCTCCCATT-GGATGTGGCTTCTGCTGCAGGACAGAACACCACATTTTTATCACAGACTCAGAATCA------------GCT--ATGTGCGGCACTTAAAATGACATTCTAAATGCTCTATCTTC---TTGTGATTAGATAATTTTTTAAGA---CAAAAAGGCATGAGAAAACCAATTACCCTGTCACTCTCTCACCCCAAAAGCAGGCAGGGAAATGCAGCATCCAGGTATGGTCCCCACAGGCACCCAGATGCCTAGA-CACATGCACTTTCACAGCCTGTCTACACA-------------CTCACCCTCCCAGCTGTCCACTGTGTGCCCAGTGCTGCAGAGAGGAAATGGGCCATTCCTGGTCCT------GCTAAGTTATATCAACCTCTAGAAATTCAAGGACAAACTGATAGCATA i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=883641.000000 s hg38.chr17_GL383563v3_alt 248886 332 + 375691 ATGCACAGCCTCATATTCTCTGCCTTAGGAAAGATAAGAAAATTCATCCTAAGCTATTTCGGACTTTTCTGGGCACTGGAGCCCTCTGGAGATTAAGACAGGCTGGT-------------------GGTAGCTCAAGACTGTTACGGAGTGTGAGGGTGACTCATGAGGGG--GAT--GGGGAAACC------------CTCAACTAAATTATTAAACTTGCTAAATTTGTCTTTCCTTCCATTCACTTTCTTTTCCTTCAAAGATCCCTCACTTCTgccctcccacagctcagc---------tgtgaccatcttttcatcccacaaagtgtctc-------------------cccac-agacgatgttttaaggaa----------------------------------------------------------------tttcctcttccatgga-c------ s panTro4.chr17 223749 332 + 82630442 ACGCACAGCCTCATAGTCTCTGCCTTAGGAAAGATAAGAAAATTCATCCTGAGCTATTTTGGACTTTTCTGGGCACCGGAGCCCTCTGGAGATTAAGACAGGCTGGT-------------------GGTAGCTCAAGACTGTTACGGAGTGTGAGGGTGACTCATGAGGGG--GAC--GGGGCAGCC------------CTCAACTAAATGATTAAACTTGCTAAATTTGTCTTTCCTTCCATTCACTTTCTTTTCCTTCAAAGGTCCTTCACTTCTgccctcccccagctcagc---------tgtgaccatcttttcatcccacaaagcgtctc-------------------cccac-agacgatgttttaaggaa----------------------------------------------------------------tttcctcttccgtgga-c------ i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 111242 333 + 73212453 ACACACAGCCTCATATTCTCTGCCTTAGGAAAGATAAGAAAATTCATCCTAAGCTATTTCGGACTTTTCTGGGCACTGGCGTGCTCTGGAGATTAAGACAGGCTGGT-------------------GGTAGCTCAAGACTGTTACAGAGTGTGAGGGTGACTCAGGAGGGG--GAT--GGGGCAGCC------------CTCGACTAAAGTATTAAATTTGCTAAATTTGTCTTTCCTTCCATTCACTTTCTTTTCCTTCAAAGATCCTTCACTTCTGCCCTGCCACAGCTCAGC---------TGTGACCATCTTTTCATCCCACAAAGTGGCTC-------------------CCCACAAGATGATGTTTTAAGGAA----------------------------------------------------------------TTTCCTCTTCCATGGA-C------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 227306 333 - 81552678 ACACACAGCCTCATATTCTCTGCCTTAGGAAAGATAAGAAAATTCATCCTAAGCTATTTCGGACTTTTCTGGGCACTGGAGTGCTCTAGAGATTAGGGCAGGCTGGT-------------------GATAGCTCAAGACTGTTACAGAGTGTGAGGGTGACTCATGAGGGG--GAC--GGGGCAGCC------------CTCGACTAAATTATTAAATTTGCCAAATTTGTCTTTCCTTCCATTCGCCTTCTTTTCCTTCAAAGATCCTTCACGTCTGCCCTCCCACAGCTCAGC---------TGTGACCATCTTTTCATCCCACGAAGTGTCTC-------------------CCCACAGgatgatgttttaaggaa----------------------------------------------------------------tttcctcttccatgga-c------ i nomLeu3.chr19 I 270 C 0 s rheMac3.chr16 141223 351 + 80904711 ACACACAGCCTCGTATTCTCTGCCTTAGGAAAGATAAGAAAATTCATCCTAAGCTATTTCGGACTTTTCTGGGCACTGGAGCGCTCTGGAGATTAGGACAGGCTGGT-------------------GGTAGCTCAGGACTGTTATGGAGTGTGAGGGTGACTCATGAGGGG--GAC---GGGCAGCC------------CTCGACTAAATTATTAAATTTGCGAAATTTGTCTTTCCTTCCATTCACCTTCTTTTCCTTCAAAGATCCTTCACTTCTGCCCTCCCGCAGCTCAGC---------CGTGACCATCATTTCATCCCACGAAGTGGCTCCCTGTGACCATCATTTCATCCCACAAgatgatgtttt-aggaa----------------------------------------------------------------tttcttcttccatggacc------ i rheMac3.chr16 C 0 C 0 s macFas5.chr16 146623 351 + 80997621 ACACACAGCCTCGTATTCTCTGCCTTAGGAAAGATAAGAAAATTCATTCTAAGCTATTTTGGACTTTTCTGGGCACTGGAGCGCTCTGGAGATTAGGACAGGCTGGT-------------------GGTAGCTCAGGACTGTTATGGAGTGTGAGGGTGACTCATGAGGGG--GAC---GGGCAGCC------------CTCGACTAAATTATTAAATTTGCGAAATTTGTCTTTCCTTCCATTCACCTTCTTTTCCTTCAAAGATCCTTCACTTCTGCCCTCCCGCAGCTCAGC---------CGTGACCATCATTTCATCCCACGAAGTGGCTCCCTGTGACCATCATTTCATCCCACAAGATGATGTTTT-AGGAA----------------------------------------------------------------TTTCTTCTTCCATGGACC------ i macFas5.chr16 C 0 C 0 s chlSab2.chr16 134338 352 + 75148670 ACACACAGCCTCGTATTCTCTGCCTTAGGAAAGATAAGAAAATTCATCCTAAGCTATTTTGGACTTTTCTGGGCACTGGAGCACTCTGGAGATTAGGACAGGCTGGT-------------------GGTAGCTCAGGACTGTTACGGAGTGTGAGGGTGACTCATGAGGGG--GAC---GGGCAGCC------------CTCGACTAAATTATTACATTTGCGAAATTTGTCTTTCCTTCCATTCATCTTCTTTTCCTTCAAAAATCCCTCACTTCTGCCCTCCGGCAGCTGAGC---------TGTGACCATCATTTCATGCCACGAAGTAGCTCCCCATGACCATCATTTCATCCCACAAgatgatgttttaaggaa----------------------------------------------------------------tttcttcttccatggacc------ i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 942752 326 - 1291538 ACGCACAGCCTCATATTCTCTGCCTTAGGAAAGATAAGAAAATTCATCCTAAGCCATTTCGGTCTTTTCTGGGCACTGCAGTGCGCTGGAGATTAGGACAGGCTGGT-------------------GGTGTCTCGAGACTGCTAAGGAGTGTGAGGGTGACTCATAGG-----------GAGCAGCC------------CTTGACTAAATCATTAAGTTTGCTGAATTTGTCTTTCCTTCCATTCACCTTTTTTTCCTTCAAAGCTCCTTCACTTCTGCCCTCCCACAGCTCAGC---------TATGACCATCATTTCATCCCACTAAGTGTCTG-------------------CCCACAAGATAATGTTCTAAGGAA----------------------------------------------------------------TTTCCTTTTCCATGGA-C------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75876716 366 + 122082543 ATGCACAGCCTCGCATTCTTTGCCTTAGGAAAGATAAGAAAATTCATCTGAAGCTATTTCAGACTTTTCTGGA-AATGGGACACTCTAGAGATTAGAATGGGCTGGTAGAGGCCCTCCCTAAGTCCGGGAGCTCCTGACTTTTAAGGCATGTGC---TGATCCAGGTGGTG--GGA---------------------------------------------------TCTTCCTTTCTTCCATCCACTTTCTTTCCTTTTTCTTTCCCTTGACCTCTAACATCCCG--GTTCACA---------TGTGAGCAGTATTTCATCCTGAGAAGT---TC-------------------TTCATCAGACTATGT----AGAAAAATGTCCTCCTTGCTTATATCTGAGTGCtctcgctccctctttctgtctttgtccctctgtctgtctctttctccaaggt-c------ i mm10.chr11 C 0 I 124 s canFam3.chr9 15702876 370 - 61074082 ATGCACAGCCTCATATTCTTTGCCTTAGAAGAGATAAGAAAATTCACCCTAAGTTATTTTGGACTTTTCTGGGCACCAGAGCACTCTGAAGATTAGGATGGGCCAGT---GGTGGGCCCTGTGCGTGGCAGCTCAGGAAGGTGAGGGGGTGTGAGGGCACCCTGTGGGGGGCTGGTCAGGGGCAGCTGCCTCCTCAATGCTCCACTAAAGTGTTCTGTTTGCTAAATTTGTCT---------TCCACCTCCTTTTCCCGGATAGCTCCTTCCTCTCTGTCCTCCCACAGCTTGGCAGGTGGAGGGGTGACCGGCACTTCATCCTGCTCAGTGTCTG--------------------CCACAGgataatctctggaggga----------------------------------------------------------------tttcctttctcctgac-agttggt i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=940027.000000 s hg38.chr17_GL383563v3_alt 249218 378 + 375691 atgtgcattgtcaaaggg--gtcccctg-----aagattagaaggacctcaggttcaaaggggagatttctGGCTGAAGAGGAAGGGAGGCCTCTGATAGTTATGGAATATctat-----gctggaggttttgcccactt---------caacagtcttactgaattctcgcagcaa--ctgtggagcagaca---------------------------ttattaactccatctggggatgaggagtcagggactTCC-AGCAAGACAGAATGCTAGCACACACTGTGAGGCCCTGCCTGCAGCTTTTCctgt--tccaaag---acacggaagtgatagaggaaaatactttcacaacaacagcagcaag--gaaatgtgcgcaaaaacaagatctatatctccat-----ggatcataaattcaaagtatttgccatt s panTro4.chr17 224081 380 + 82630442 atgtgcattgtcaaaggg--ctcccctg-----aagattagaagaacctcaggttcaaaggggagatttctGGCTGAGGAGGAAGGGAGGCCTCTGATAGTTATGGAATATctat-----gctggaggttttgcccactt---------caacagtcctactgaattctcacagcaactctgtggagcgggca---------------------------ttattaactccatctggggatgaggagtcagggactTCC-AGCAAGACAGAATGCTAGCACACACTGTGAGGCCCTGCCTGCAGCTTTTCctgt--tccaaag---acacggaagtgatagaggaaaatattttcacaataacagcagcaag--gaaatgtgcgcaaaaacaagatctgtatctccat-----ggatcataaattcaaagtatttgccatt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 111575 380 + 73212453 ATCTGCATCGTCAAAGGG--GTCCCCTG-----AAGATTAGAAGGATCTCAGGTTCAAAGGGGAGATTTCTGGCTGAGGAGGAAGGGAGGCCTCTAACAGTTATGGAATATctat-----gctggaggttttgcccactt---------caacagtcttactgaattctcgcagcaactctgtgcagcgggca---------------------------ttattaactccatctggggatgaggagtcagggactTCC-AACAAGACGGAATGCCAGCACACACTGTGAGGCCCTGCCTGCAGCTTTTCCTGT--TCCAAAG---ACACAGCAGTGATAGAGGAAAATATTTTCACAACAACAGCAGCAAG--TAAATGTGCGCAAAAACAAGATCTATATCTCCAT-----GGATCAGAAATTCGAAGTATTTGCCATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 227639 378 - 81552678 atctgcatcgtcaaaggg--gtcccctg-----aagattagaaggacctcaggttcaaaggGGAGACTTCTGGCTGAAGAGGAAGGGAGGCCTCTAATAGTTATGGAATATCTAC-----GCTGGAGGTTTTG-CCACTT---------TAACAGtcttactgaattctcgcagcaactctgtggagtgggca---------------------------ttatcaactccat-tgcggatgaggagtcagggactTCC-AGCAAGACAGAATGCTAGCACACACTGTGAGGCCCTGCCTGCAGCTTTTCctgt--tccaaag---acacagcaataatagcggaaaatattttcacaacaacagcagcaag--taaatgtgcgcaaaaacaagatctatatctccat-----ggatcagaaattcgaagtatttgccatt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 141574 382 + 80904711 acatgcaccgtcaaaggg--gtctcccg-----aagattagaaggacctcaagttcaaaggggagatttctGGCCGAGGAGGAAGGGAGGCCTCTAATAGTTGTGGAATATCCACGCTAAGCTGGAGGTTTCGCCCGCTG----------GACAatctgactgaattctcacagcagctctgcggagcgggcg---------------------------ttattaactccatctggggatgaggactcagggacttcc-agcaagacagaacgacAGCACACCCTGTGAGGCCCTGCCTGCAGCTTTTCctgc--tccaaag---acacagcaataatagaggaatatattttcacaacagcagcagcaag--taaatgtgtgcaaaa--aagatctgtatctccat-----ggatcagaaattcaaagtatttaccatt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 146974 382 + 80997621 ACATGCACCGTCAAAGGG--GTCTCCCG-----AAGATTAGAAGGACCTCAAGTTCAAAGGGGAGATTTCTGGCCGAGGAGGAAGGGAGGCCTCTAATAGTTGTGGAATATCCACGCTAAGCTGGAGGTTTCGCCCGCTG----------GACAatctgactgaattctcacagcagctctgcagagcgggca---------------------------ttattaactccatctggggatgaggactcagggacttcc-agcaagacagaacgacAGCACACCCTGTGAGGCCCTGCCTGCAGCTTTTCctgc--tccaaag---acacagcaataatagaggaatatattttcacaacagcagcagcaag--taaatgtgcgcaaaa--aagatctgtatctccat-----ggatcagaaattcaaagtattcaccatt i macFas5.chr16 C 0 C 0 s chlSab2.chr16 134690 409 + 75148670 acatgcaccgtcaaaagg--gtctcctg-----aagattagaaggacctcaagctcaaaggggagatttctGGCCAAGGAGGAAGGGAGGCCTCTAATAGTTGTGGAATATCCACTCTAAGCTGGAGGTTTCGCCCACTG----------GACAacctggctgaattctcacagcagctctgcggagcgggcgttattaactccatccggggatgaggCATTATTAACTCCATCCGGGGATGAGGAGTCAGGGACTTCC-AGCAAGACAGAATGACAGCACACCCTGTGAGGCCCTGCCTGCAGCTTTTCccgc--tccaaag---acacagcaataatagaggaaaatattttcacaacagcagcagcaag--taaatgtgcgcaaaa--aagatctgtatctccgc-----ggatcagaaattcaaagtagttgccatt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 943078 385 - 1291538 ATCTGCAACTTCGAAGAG--GTCACCTG-----GAGATAAGAAGGACCCCAAGTTCAAAGGGGAGATGTCTGGCTGAGGAGGAAGGGAAGCCTctaacagttatggaacatctactcttcactggacattctgcccactt---------tagcaatcatactgaattctcacagcaactctgtgaagtgggta---------------------------ttactaactccatctggagaagaggaGTCAGGTACTCCC-AGCAAGACAGAATGCTAGCAGACACTTTGAGGCCCTACCTGCAGCTTTCCCTAT--TCCAAAG---ATAAAGCTGTAATAGAGGAAAATATTTTAACAACAACGGCAGCAAG--TAAACGTGTGCAAAAACAAGATCTATATCTCAAT-----GGATCAGAAATTTAAAGTATTTGCCATT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75877206 339 + 122082543 ATCTGTACCTTAAAAGGG--GTCCCTTG-----GTGACAAGAGAGACCTCAGCTAAAGAGTG---------GGCTGTGAGGAAGGGGCAGCCTCTAACACTTATGTAGTGT---------GAGGCAG---TCGTATGCTT----------GCCACCCCC-----AACCTCCCAGCCAGTCTATGAAG-GGCCA---------------------------TCATTATCACCGTGTGGGGACAAG------GGCCCTCCA-GGCAGGTCTAAATG-------ACACTTCAAGGCCTTGCCT----------CTGTCATCTAAATGACACACAGCAATGACAGATGGAAATATTTTAAAAACAACAT--GTAAGCTTGACTGCACTCAAAACCAAGATGTATACCTCAGT-----AGATCAGAGGTTCAAACTACTTACTCTT i mm10.chr11 I 124 I 152 s canFam3.chr9 15703246 390 - 61074082 atctgcatcttaaaaagggagccccccacctccaagaccagaaggacctcaggttcaaggtgg-gatttctggctg-ggtgagaggGAGGCCTCTGATA-ttacgaagtacctatcctaggccagacattctgtgcattttatacgcttcagtgaccttgctg-atttccatgacacctctaggaaattggtg---------------------------ctttcatctccatttcagggagagaaaTCAGGTacctctgggcaagacaaagtgttgatccatactcttaagacct-----------tctctgt--tccaaaa---acacagcagtgacagataaaaatattctaaaaaca--aacagaaaacttatctgtgtttaaaaataagatctatctacctatccaacagatcagaaactccaa--agttactatt i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=38091.000000 s hg38.chr17_GL383563v3_alt 249596 25 + 375691 ttgagggg-t-----------------------------------------------------gaaggcacagccgctt s panTro4.chr17 224461 25 + 82630442 ttgagggg-t-----------------------------------------------------gaaggcacagccgctt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 111955 25 + 73212453 TTGAGGGG-T-----------------------------------------------------GAAGGCACAGCCGCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 228017 22 - 81552678 ttgagggg-t-----------------------------------------------------gaaggcacagcct--- i nomLeu3.chr19 C 0 I 2691 s rheMac3.chr16 141956 22 + 80904711 ttgagggg-t-----------------------------------------------------gaaggcagagcct--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 147356 22 + 80997621 ttgagggg-t-----------------------------------------------------gaaggcacagcct--- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 135099 22 + 75148670 ttgagggg-t-----------------------------------------------------gaaggcacagcct--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 943463 22 - 1291538 TAGAGTGG-T-----------------------------------------------------GAAGCCACAGCCT--- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75877697 75 + 122082543 ctgagtgt-taggatcacaggtgtgtgtcaatgtgcctagctacttaactattttgagcatccaaaTGCGCTGCCG--- i mm10.chr11 I 152 C 0 s canFam3.chr9 15703636 23 - 61074082 ttgaggggct-----------------------------------------------------gaagacagagcct--- i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=1373422.000000 s hg38.chr17_GL383563v3_alt 249621 632 + 375691 gctgagctctgggctccgaagcagacagaggcagctgggagattggtcttccagggttcagggactaaaagtgacccttgggaggtgggggacc-------------------agag-cagagtcactaaaa-tcagg--ctgttgaggggattttccacctgggaaaggaggctgaaaacagcagggacctgccccgggactat-aacatacataaggaaatgagctcagaggaaagcaagcccagcagcag------------cagggcctggccaagctgtcacggctgggatga-----gggtctgggaataa----------------------------------------------tcccagtatcaccatggatgagcagctcgccacaaacccaggatgcctggctcagcactg-----------------ggcaaccccagacccagcgggaggcagctgcaaaactattcagctagaagagccgggtg--------ggaaacagagagaaacggactattatcacacaggatgagcgcacaaaccaaaattcc-aaaacttccaaggaaaactaaccctaagaaagacaacccacgaaaccaatg---gggaattgatctcaaggaaagacttagtgacttggaaggcagtactgaagaattcacccagaaaggaccacagaaagataaagaaataaacaagaa--agagcagttgggagctgt-gggggatgg-ttgagg s panTro4.chr17 224486 633 + 82630442 gctgagctctgggctccgaagcagacagaggcagctgggagattggtcttccagggttcagggactaaaagtgacccttgggaggtgggggacc-------------------agag-cagagtcactaaaa-tcagg--ctgttgaggggattttccacctgggaaaggaggctgaaaacagcagggccctgccccgggactataaacatacataaggaaatgagctcagaggaaagcaagcccagcagcag------------aagggcctggccaagctttcacggctgggatga-----gggtctgggaataa----------------------------------------------tcccagtatcaccatggatgagcagctcgccacaaacccaggatgcctggctcagcactg-----------------ggcaaccccagacccagagggatgcagctgcaaaactattcagctagaagagccgggtg--------ggaaacagagagaaacagactattatcacacaggatgagcgcacaaaccaaaattcc-aaaacttccaaggaaaactaaccctaagaaagacaacccatgaaaccaaTG---GGGAATTGATCtcaaggaaagacttagtgacttggaaggcagtaccaaagaattcacccagaaaggatcacagaaagataaagaaataagcaagaa--agagcagttgggagctgt-gggggatgg-ttgagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 111980 631 + 73212453 GCTGAGCTCTGGGCTCAGAAGAAGACAGAGGCAGCTGGGAGATTGGTCTTCCAGGGTTCAGGGACTAAAAGTGACCTTTGGGAGGTGGGGGACC-------------------AGAG-CAGGGTCACTAAAA-TCAGG--CTGGTGAGGGGATTTTCCACCTGGGAAAGGAGGCTGAAAACAGCAGGGCCCTGCCCCGAGACTAT-AGCATACATAAGGAAATGAGCTCAGAGGAAAGCAAA-CCGGCAGCAG------------CAGGGCCTGGCCAAGCTGTCACGGCTGGGATGA-----GGGTCTGGGAATAA----------------------------------------------TCCCAGTATCACCACGGATGAGCAGCTCGCCACAAACCCAGGATGCCTGGCTCAGCACTG-----------------GGCAACGTCAGACCCAGGTGGAGGCAGCTGCAAAACTATTCAGCTAGAAGAGCTGGGTG--------GGAAAGAGAGAGAAACGGACTATTATCACACAGGATGAGCGCACAAACCAAAATTCC-AAAACATCCAAGGAAAACTAACCCTAAGAAAGACAACCCATGAAACCAACG---GGGAAGTGATCTCAaggaaagacttagtgacttggaaggcagtaccgaagaactcacccagaaagtatcacagaaagctaaagaaataaacaagaa--agagcagttgggagctgt-gagggatgg-ttgagg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 230730 629 - 81552678 gctgagctctgggctcagaagcagacagagacagctgggagattggtcttccagggttcaggaactaaaagtgacccttgggaggtgggggacc-------------------agag-cagagtcactaaaa-tcagg--ctggtgaggggattttccacctaggaaaggaagctgaaaacagcagggccctgccccgggactat-agcatacataaggaaacgagctcagaggaaagcaag-ccggcagcag------------cagggcctggccaagctgtcacagctgggatga-----gggtctgggaataa----------------------------------------------tcccagtatcaccatggatgagcagctcaccacaaacccaggatgcctggctcagcactg-----------------ggcaaccctggacccaggtggaggcagctgcaaaactattcagcgagaagagctgggtg--------ggaaagagagagaaacggactattatcacacaggatgagtgcacgaaccaaaattcc-aaaacatcccaggaaaactaaccctaagaaag--aacccacgaaaccaacG---GGGAAGTGATCtcagggaaagacttagggacttggaaggcagtactgaagaattcacccaggaaggatctcagaaagataaagagatcaacaagaa--agagcagttgggagctgt-gggggatgg-ctgagg i nomLeu3.chr19 I 2691 C 0 s rheMac3.chr16 141978 609 + 80904711 gctgagctctgggctcagaagcagacacaggcagctgggagatgggtcttccagggtgcagggactaaaagtgtcccttgggagg-gggggacg-------------------agag-cagagtcgctaaaa-tcagg--ctggcgaggggattttccacctgggaaaggaggctgaaatcagcagggtcctgccccgggactac-agcgtatacaaggaaatgagctccgaggcaagcaag-ccgacagcag------------cagggccgggccaagctgtcgcggctggggtga-----ggctctgggaataa----------------------------------------------tcccagtatcaccatggataagcagctcgccacaaacccaggacgcctggctcagcaccg-----------------ggcaaccccggacccaggtgggagcagctgcaaagctatccggctagaagagctgggtg--------ggaaagagagagaaagggaccattatcacacaagatgagtgcgcaaaccaaaattcc-aaaacacccgaggaaaactaaccctaagaaagac----------accaaGG---GGGAGGTGATCTCgaggaaagacttagcgacttggaaggcggtaccgaggaactca-ccggaaagtatcgcagaaagataaagaaataaacaagaa--a----------gagccgt-gggggatgg-ttgagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 147378 599 + 80997621 gctgagctctgggctcagaagcagacacaggcagctgggagatgggtcttccagggtgcagggactaaaagtgtcccttgggagg-gggggacc-------------------agag-cagagtcgctaaaa-tcagg--ctggcgaggggattttccacctgggaaaggaggctgaaatcagcagggtcctgccccgggactac-agcgtatacaaggaaatgagctccgaggcaagcaag-ccgacagcag------------cagggccgggccaagctgtcgcggctggggtga-----ggctctgggaataa----------------------------------------------tcccggtatcaccatggataagcagctcgccacaaacccaggacgcctggctcagca---------------------------ccggacccaggtgggagcagctgcaaagctatccagctagaagagctgggtg--------ggaaagagagagaaagggaccattatcacacaagatgagtgcgcaaaccaaaattcc-aaaacacccgaggaaaactaaccctaagaaagac----------accaaGC---GGGAGGTGATCtcgaggaaagacttagcgactcggaaggcggtaccgaggaactca-ccggaaagtatcgcagaaagataaagaaataaacaagaa--a----------gagccgt-gggggatgg-ttgagg i macFas5.chr16 C 0 C 0 s chlSab2.chr16 135121 609 + 75148670 gctgagctctgggctcagaagcagacagaggcagctgggagatgggtcttccagggtgcagggactaaaagtgtcccttgggagg-tggggacc-------------------agag-cagagtcactaaaa-tcagg--ctggtgaggggattttccacctgggaaaggaggctgaaatcagcagggtcctgccccgggactac-agcacatacaaggaaataagctcagaggaaaggaag-ccgacagcag------------cagggctgggccaagctgtcgcggctggggtga-----ggctctgggaataa----------------------------------------------tcccggtatcaccatggataagcagctcgccacaaacccaggacgcctggctcagcaccg-----------------cacaatcccggacccaggtgggagcagctgcaaagctatccagctagaagagctgggtg--------ggaaagagagagaaagggaccattatcacacaagatgagcccgcaaaccaaaattcc-aaaacacctgaggaaaactaaccctaagaaagac----------accaaGG---GGGAGGTGATCtcgaggaaagacttagcgacttggaaggcggtaccgaggaactca-ccgggaagtatcgcagaaagataaagaaataaacaagaa--a----------gagccgt-gggggatgg-ttgagg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 943485 658 - 1291538 GCAAAGCTCTGGGTCCAGAAGTAGAGAGAGGCAGCTGGGAGACTGGTCTTCCAGGGTTCGGGGACTAAAAGTGTCCCTTGGGAGGTGGGGGACC-------------------AGAG-CAGAGTCACTAAGA-TCAGG--CTGGTGAGGGGATTTTCCATCGGGGAAA-------GAAAACGGCAGGCTCCCGCTCCAAGACTAG-AGCACGTACAAGGACATGAGCTCAGAGGAAAGCAAG-GCAGCAGCCA------------CAGGGCCTGGCCCAGCTGTCACAGCTGGGACGA-----GGATCTGGGAATAACCAGATCCAGTTCGCACCTCCATGGCAGACCTCCGCGACGCTCGTGCCCTGTTATCAGCATGAATGGGCAGCTCACCACAAACCCAGGATGCCTGGCTCCACGCTG------------------GTGGCCCAGGGCCCAGATGGAGGCAGTTACAAAACCATCTGGCCAGAAGAGTTGGGTG--------GGAAGGAGAGAGAAATGGACC---ATCACACAGGATGAGCGCACAAACCAAAATTCC-AAAACATCCGAGGAAAACTAACCCTAAGAAAGATGACCCACA--ACCCCGG---GGGAGGGGACCTCAAGGAAAGACTGAGTGACGTGGAAGGCAGTACCTAGGTATTCACCCAGAAAGCATTGCGGGACG-TGAAGA------CAAGAATGAGAGCAGCTG-GGGCTGC-AGAGGTTGG-TTAAGG i calJac3.chrUn_GL286409 C 0 I 872 s mm10.chr11 75877772 377 + 122082543 GGGGAGCTCAGCGCCCAGTAGTAGGTGGAGACAGCTGGGAGATTAGTCTTTCTATATATGAGAACTTAAAGCATCCCACAGGAGGTAGAGGACCACAGACTAGTCTAGACCAGACAG-CCAAATCACTAAAACTGAAA--CTAGAGAGAGGGTTTCTCACCTGGGAGAGGGGGGTGCGCACAGCAGGACGCGGTCCCAAGGCAGG-AACATGTGAGAGAGAGAGTGTTTGAGGG-----GAG-TGGACAGCTG------------CACA---------------CACAGCAGGACTG------------GGGTGTGT----------------------------------------------TCCCA------------------AGCTCACTACACA-CCAGGATGCCTGGCTCTGCCCTG-----------------AGGAACTCGGGACCCAGTG-----------------------------------------------------------------------------ACAGG--------------------------AACTCCCAAAGAA-------CCTACGAGTG--------------CAACA---GAGGA----------------------TGGCCTGGGGG----------------------------------------------------------------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15703659 625 - 61074082 gctggggtctgggtacagaagcagatggaggaagccaaaag---------ccagggaacaggggttaaaagtggtgcctggggggtggggccca-------------------agagccagagtcactgaaa-atgggaactggtgaagggatttcccaccttgagaaggaggctgaaaaaagcagagactgcctcctggcccaa-gac-----caagaatgtgaccgctgagg-----cag-ctggaagtagcacacacacatccagggcctggctaagctgc--ctgacgtagtgatgctcagctctgggcactg------------------------------------------------------tcactatggacacaaagcccatcgctaacccaagacacccggctctgcactgacatgggaggtgagaagagggacccaggacctgggtggaggaaa-tgcaagatcttttcgcaaggacagctgggtggagatggtgggaagggagacagatggact---cccactca-----agtgtacaaacgcaaattccaaaaacacctgaggaaagcagacgctaagaatggcatccgacaaaaccaacagttgggaGTTAACCTCT----AAGGTTTAGTGAACT--------------AAAGACTCT-ccagaaagtatcccagcaagataaagaaagaaacaggaa--agagctgttgggagctccaggaggatggactgagg i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=255797.000000 s hg38.chr17_GL383563v3_alt 250253 122 + 375691 agctctgaaatgtatccagcgggatttccag-agaggagagaaggaatggcagaggagcaatattcaaagacatcatggctgagaattttccagaattgaagGTGTTTTGTGGA----TCCTCGGAT s panTro4.chr17 225119 122 + 82630442 ggctctgaaatgtatccagcgggatttcctg-agaggagagaaggaatggcagaggagcaatattcaaagacatcatggctgagaattttccagaattgaagGTGTTTTGTGGA----TCCTTGGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 112611 122 + 73212453 ggctctgaaatgtagccagcgggatttccag-agaggagagaaggaatggcagaggaacaatattcaaagacatcatggctgagaattttccagaactgaAGGTATTTTGTGGA----TCCTTGGAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 231359 122 - 81552678 ggctctgaagtgtacccagtggggtctccag-agaggagagaaggaatggcagaggagcaatattcaaagacatcatggctgagaattttccagaactgaaggcgttttgtgga----tcctcggat i nomLeu3.chr19 C 0 I 16 s rheMac3.chr16 142587 122 + 80904711 ggctctaaaatgtatccagcaggacttccag-agaggagagaaggaatggcagaggagccatattcaaagacatcacggctgagaaatttccagaactgaaggtgttttgtgga----ccctcagat i rheMac3.chr16 C 0 I 16 s macFas5.chr16 147977 122 + 80997621 ggctctaaaatgtatccagcaggacttccag-agaggagagaaggaatggcagaggagccatattcaaagacatcacggctgagaaatttccagaactgaaggtgttttgtgga----ccctcagat i macFas5.chr16 C 0 I 16 s chlSab2.chr16 135730 114 + 75148670 ggctctaaaatgtatccagtgggatttccag-agaggagaaacggaatggcagaggagccacattcaaaga--------ctgagaaatttccagaactgaaggtgttttgtgga----ccctcagat i chlSab2.chr16 C 0 I 16 s mm10.chr11 75878149 98 + 122082543 AGTTTTAAAACATAT-------GATGCCCAG--GAGGAg-gatgggatgggatggga-------------------tgggatgAAATTTTCCAGAATAGAAAGCATTCTATGAAAAACACATGAGAA i mm10.chr11 C 0 C 0 s canFam3.chr9 15704284 121 - 61074082 --ctctacaaagtatccaacgggacttccagaagaggagacatgcattagcaggagagcaacatgtaaggacagcatggctgaaaatctcccataactgaagaccttttatgga----tcctcagat i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 944143 872 - 1291538 I e papAnu2.chr16 144887 0 + 74645514 C a score=78417.000000 s hg38.chr17_GL383563v3_alt 250375 54 + 375691 -----------------GTGACAAGCAAGATTTAA---AAAG-TAATAAATCCTGATCTGGAAG--ACCAG-----CTGCA---C s panTro4.chr17 225241 54 + 82630442 -----------------GTGACAAGCGAGATTTAA---AAAG-TAATAAATCCCGATCTGGAAG--ACCAG-----CTGCA---C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 112733 54 + 73212453 -----------------GTGACAAGCGAGATTTAA---AAAG-TAATAAATCCCGATCTGGAAG--ACCAG-----CTGCA---C i ponAbe2.chr17 C 0 I 830 s nomLeu3.chr19 231497 54 - 81552678 -----------------gtgacaagcgagatttaa---aaag-taataaatcccgatctggaAG--ACCAG-----CTGCA---C i nomLeu3.chr19 I 16 C 0 s rheMac3.chr16 142725 53 + 80904711 -----------------gtgacaagcgagatttaa---aacg-taatgaatccccatctggaAG--ACCAG-----CTGCA---- i rheMac3.chr16 I 16 C 0 s macFas5.chr16 148115 53 + 80997621 -----------------gtgacaagcgagatttaa---aacg-taatgaatccccatctggaAG--ACCAG-----CTGCA---- i macFas5.chr16 I 16 C 0 s chlSab2.chr16 135860 56 + 75148670 -----------------gtgacaagtgagatttaa---aaag-taacgaatccccatctggaAG--TCCAG-----CTGCACAC- i chlSab2.chr16 I 16 C 0 s calJac3.chrUn_GL286409 945015 51 - 1291538 -----------------GTGCCAGGCGAGATGTAA---AAAGTTAATAAATGCCTGGTCGAAGA--GCAGG-----AC------- i calJac3.chrUn_GL286409 I 872 C 0 s mm10.chr11 75878247 51 + 122082543 -----------------ATACCAGGCAGAA--TAA---CTAA-AAGCAAGACCGTCTCTGTAAGCTAATGG-----CTC------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15704405 72 - 61074082 taaaagcccattattggttgccaagcgag--ttaagtgaaaa-aaataactccacatctggaAA--AGCAGGGGATC-------- i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=-1906.000000 s hg38.chr17_GL383563v3_alt 250429 1 + 375691 -G s panTro4.chr17 225295 1 + 82630442 -G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 231551 1 - 81552678 -G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 142778 1 + 80904711 -G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 148168 1 + 80997621 -G i macFas5.chr16 C 0 C 0 s chlSab2.chr16 135916 1 + 75148670 -A i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 945066 1 - 1291538 -G i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15704477 1 - 61074082 T- i canFam3.chr9 C 0 C 0 e mm10.chr11 75878298 0 + 122082543 C e papAnu2.chr16 144887 0 + 74645514 C e ponAbe2.chr17 112787 830 + 73212453 I a score=106196.000000 s hg38.chr17_GL383563v3_alt 250430 59 + 375691 CCTCCTCGCCCCTCA---CATTCTGTCCCAGCCCTGCCT-CCCCAGGGCACTTCCC----AGAAGCT s panTro4.chr17 225296 59 + 82630442 CCTCCTCGCCCCTCA---CATTCTGTCCCAGCCCTGCCT-CCCCAGGGCACTTCCC----AGAAGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 113617 59 + 73212453 CCTCCTTGCCCCTCA---CATTCTGTCCCAGCCCTGCCT-CCCCAGGGCACTTCCC----AGAAGCT i ponAbe2.chr17 I 830 C 0 s nomLeu3.chr19 231552 59 - 81552678 CCTCCTCGCCCCTCA---CGCTCTGTCCCAGCCCTGCCT-CCCCAGGGCACTTCTC----AGAAGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 142779 58 + 80904711 CCTCCTCGCCCCTCA---CATGCTGTCCCCGCCCTGCC--CCCCAGGACACTTCCC----ACGAGCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 148169 58 + 80997621 CCTCCTCGCCCCTCA---CATGCTGTCCCCGCCCTGCC--CCCCAGGACACTTCCC----ACGAGCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 135917 58 + 75148670 CCTCCTCGCCCCTCA---CGTGCTGTCCCCGCCCTGCC--CCCCAGGACACTTCCC----AGGAGCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 945067 41 - 1291538 --------------------CGGCGTCCCCACCC-GCCT-CCCCAGAGCACTTCCC----GCAAGCT i calJac3.chrUn_GL286409 C 0 I 27 s mm10.chr11 75878298 46 + 122082543 --------CCTCTGT---CCTGCTGCCCCTG--TTGCCT-ACCCTGG---CTCCCC----CGATGCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15704478 67 - 61074082 ACTCCCTGGTGCTGGGATTGTTCTGTTACCACACTCCCCATCTCATGACCCTCTCCAGAGAGAAGCT i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=434505.000000 s hg38.chr17_GL383563v3_alt 250489 238 + 375691 ACCTGCC-ACGTCCTG--CTGTTTTGGCTCCAATCCGACCTGGCACAG----GGAGGTTCTGACT------------------------G------TCCCTGCCCAT--CTGCT-ACTCCCCAGAGTCCTTGCTGAGCCTC------GACTTCCTTCCCTCAAATGGGGTTGGAACTAGAACCATAGAACTGTAgcagcagaaggggcgttgggtggcatcgtgacagcagacaacggctgagtttggtttccagctc-ccccactaac---tggctctgtgcttgca s panTro4.chr17 225355 238 + 82630442 ACCTGCC-AGGTCCTG--CTGTTTTGGCTCCAATCCGACCTGGCACAG----GGAGGTTCTGACT------------------------G------TCTCTGCCCAT--CTGCT-ACTCCCCAGAGTCCTTGCTGAGCCTC------GACTTCCTTCCCTCAAATGGGGTTGGAACTAGAACCATAGAACCGTAgcagcagaaggggcgctgggtggcatcgtgacagcagacaacggctgagtttggtttccggctc-ccccactaac---tggctctgtgcttgCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 113676 238 + 73212453 ACCTGCC-ACGTCCTG--CTGTTTTGGCTCCAATCCGACCTGGCACAG----GGAGGTTCTGACT------------------------G------TCCCTGCCCAT--CTGCT-ACTCCCCAGAGTCCTTGCTGAGCCTC------AACTTCCTTCCCTTAAATGGGGTTGGAACTAGAACcatagaactgtagcagcagaaggggctttgggtggcatcgtgacagcagacgacggctgagtttggtttccagctc-ccctactaac---tggctctgcactcgca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 231611 237 - 81552678 ACCTGCC-ACGTCCTG--CTGTTTTGGCTCCAATCCGACCTGGCACAG----GGAGGTTCTGACT------------------------G------TCCCTGCCCAT--CTGCT-ACTCCCCAGAGTCCTTGCTGAGCCTC------GACCTCCTTCCCTCAAACGGGGTTGGAACCGGAACCACAGAACCgcagcagcagaaggggctttgggtggcatcgcgacagcagacgacggctgagtttgg-gtccagctg-ccccactaac---tggctctgtgctcgca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 142837 229 + 80904711 ACCTGCC-ACGTCCTG--CCGTGTTGGCTCCATTCCAACCTGGCACAG----GGAGATTCTGACC------------------------A------TCCCTGCCCAT--CTGCC-ACTCCCCAGAGTCCTCGCTGAGCCTC------GACTTCCTTCCCTCAAATGGAGCTGGAACTAGAACCGT-GAACCgtagaagcagacggggcttcgggcggcatcgt-------gacgaccgctgagtctggtttccggct--cccgacgaac---tggctcggtgctcacg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 148227 229 + 80997621 ACCTGCC-ACGTCCTG--CCGTGTTGGCTCCATTCCAACCTGGCACAG----GGAGATTCTGACC------------------------A------TCCCTGCCCGT--CTGCC-ACTCCCCAGAGTCCTCGCTGAGCCTC------GACTTCCTTCCCTCAAATGGAGCTGGAACTAGAACCGT-GAACCGTAGAAGCAGACGGGGCTTCGGGCGGCATCGT-------GACCACCGctgagtctggtttccggct--cccgacgaac---tggctcggtgctcacg i macFas5.chr16 C 0 C 0 s chlSab2.chr16 135975 229 + 75148670 ACCTGCC-ACGTCCTG--CCGTGTTGGCTCCATTCCGACCTGGCACAG----GGAGATTCTGACC------------------------A------TCCCTGCCCGT--CCGCC-ACTCCCCAGAGTCCTCGCCGAGCCTC------GACTTCCTTCCCTCAAATGGGGCTGGAACTAGAACCGC-AAACCGTAgcagcagacggggcttcggacggcatcgt-------gaccatggctgagtctggtttccggct--cccgacgaac---tggctcggtgctcaca i chlSab2.chr16 C 0 C 0 s mm10.chr11 75878344 235 + 122082543 GCCTGCC----------------TTGG-------CCGGCTTGGGGTGA----GGAGAAGCAGTTC------------------------AAGGGTCTGCCTACAAAT--CTGCTGGCACCCCACGGGCTTTATCAACCCCCAAGCATGAGTTATTTCCCCCAGAAAGGGGCCAAACTGGACCCACAGAACATTGGCACTAGGAAGGACGCTGGGTGGCAGCATCATGGCAGGCTCTGGCTTCACTTGGTTGCCAGCCCACCTCCTTCACCCTTAGCTCAGTACGCACA i mm10.chr11 C 0 C 0 s canFam3.chr9 15704545 255 - 61074082 GCCTGCCAATGTCCTGCTCTGTTTTAGCCCTGATCC----tggtgcagtgaagggggctctgggtttggggttaggagacctactttgag------tccctgatcatgattgcc------tcagagaactcactgagcctt------gatttcttctcctaaaatggggTCAGAACTAGAATTATGGAAACATCGCATCagaagggactttggtc-------ccacagcagaccacggctatgtttggtttctagctc-ttccattaac---tagcactgtgccccta i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 945108 27 - 1291538 I e papAnu2.chr16 144887 0 + 74645514 C a score=10737.000000 s hg38.chr17_GL383563v3_alt 250727 3 + 375691 ggt s panTro4.chr17 225593 3 + 82630442 GGT i panTro4.chr17 C 0 I 3318 s ponAbe2.chr17 113914 3 + 73212453 ggt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 231848 3 - 81552678 ggt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 143066 3 + 80904711 ggt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 148456 3 + 80997621 ggt i macFas5.chr16 C 0 C 0 s chlSab2.chr16 136204 3 + 75148670 ggt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 945135 3 - 1291538 GAt i calJac3.chrUn_GL286409 I 27 C 0 s mm10.chr11 75878579 3 + 122082543 GGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15704800 3 - 61074082 agt i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C a score=474986.000000 s hg38.chr17_GL383563v3_alt 250730 351 + 375691 tatttaacctcttgtgt-ctttatttccccatcaggaaaaggggataagaatagcaccact----ggggttgtgcagggatgaaa-tgaattcatacatgcaaggaacttatggcagtgccag-gcacacagtcagcgttcaccctggg-tagctactactgttACCATAATAACAGCCC--CCACAAACACCACATGCTCTCACACTCACAGTGCGAGGGGCTTCCCACCGAAACCTCGGACTCTCCCA--CGT---GTAGAACC--------TGCCACCCCTGCATAGGGGAAGTGGCC---------------ACAGGCTGTCCCTCCGTGCTTTTCTCCGCCG----AGTGGTCAGTTCTTCCTTG-------ACTTCTGGAGAAACCCCTCCCAG s ponAbe2.chr17 113917 352 + 73212453 tatttaacctcttgtgt-ctttatttccccatcaggaaaaggggataagaatagcaccact----ggggttgtgcagggatgaaa-tgaattcatacatgcaaggaacttatggcagtgccag-gcacacagtcagcgttcaccctggggtagctactactgttCCCATAATAACAGCCC--CCACAAACACCACATGCTCTCACACTCACAGTGCGAGGGGCTTCCCACCGAAACCTCAGACTCTCCCA--GGT---GTAGAACC--------TGCCACCCCTGCATGGGGGAAGTGGCC---------------ACAGGCTGTCCCTCCGTGCTTTTCTCCGCCG----GGTGGTCAGTTCTTCCTTG-------ACCTCTGGAGAAAGCCCTCCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 231851 305 - 81552678 tatttaacctcttgtgt-ctttatttccccatcgggaaaaggggataagaatagcaccact---gggggtcgtgcagggatgaaa-tgaattcacacatgcgaggaacttatggcactgccag-gcacagagtcagcgttcaCCCTGGG-TAGCTA------------------------------------------CTCTCACACTCACAGTGCGAGGGGCCTCCCACCGAAACCTCAGACTTTCCCA--GGT---GTAGA---------------ACCCCTGCATGGGGGAAGTGGCC---------------ACAGGCTGTCCCTCCGTGCTTTTCTCTGCCA----GGTGGTCAGTTCTTCCTTG-------ACCACTGGAGAAACCCCTCCCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 143069 354 + 80904711 tatttaacctcttgcgt-ctttatttccccatcaggaaaaggggataagaatcgcaccact----ggggttgtgtacggatgaaa-tgaattcatacatgcaaggaacttacagcagttccag-gcacacagtcaacgttcaCCCTGGGGTAGCTACAACTGTTCCCGTAACACCAGCCC--CCACAAACACCACACGCTCTCACACTCACAGTGT--GGGGCTTCCCGCTGAAACCTTGGACCCTCCCA--GCT---GTAGAACC--------TGCCACCCCTGCGTGGGGGAGGTGGCCGGCC----------AGCAGGCTGTCCCTCCGCGGTTTTCT-CCCTG----GGTGGTCAGTTCTTCCTTG-------ACCTCCAGAGAAACCCCTCCCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 148459 354 + 80997621 tatttaacctcttgcgt-ctttatttccccatcaggaaaaggggataagaatcgcaccact----ggggttgtgtacggatgaaa-tgaattcatacatgcaaggaacttacagcagttccag-gcacacagtcaacgttcaCCCTGGGGTAGCTACAACCGTTCCCGTAACACCAGCCC--CCACAAACACCACACGCTCTCACACTCACAGTGT--GGGGCTTCCCGCTGAAACCTTGGACCCTCCCA--GCT---GTAGAACC--------TGCCACCCCTGCGTGGGGGAGGTGGCCGGCC----------AGCAGGCTGTCCCTCCGCGCTTTTCT-CCCTG----GGTGGTCAGTTCTTCCTTG-------ACCTCCAGAGAAACCCCTCCCAG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 136207 357 + 75148670 tatttaacctcttgcgt-ctttatttccccatcaggaaaaggggataagaatcgcaccact----ggggttgtgtagggatgaaa-tgaatccatacatgcaaggaacttacggcagttccag-gcacacagtcaacgttcaCCCTGGGGTAGCTACAACCATTCCCGTAACACCAGCCC--CCACAAACACCACACACTCTCACCCTCACAGTGC--GGGGCTTCCCACTGAAACCTCAGACGCTGCCACCCCT---GTAGAACC--------TGCCACCCCTGCGTGGGGGAGGTGGCCGGCC----------AGCAGGCTGTCCCTCCCGGCTTTTCTCCCCTG----GGTGGTCAGTTCTTCCTTG-------ACCTCCGGAGAAACCCCTCCCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 945138 323 - 1291538 tattcaacct-ttgtgtgttttatctccccatcagggaaaggagg-aggagtagcaccacc---aggggccatgtagggatgaaaccggattcacata-gcagggaacttaccgcagggtgag-gcacagggccagcactcaCCCTGGG-TAGCTGCAACTTTGACTGTGTAAACCACCC----------------------CACACACTCCGTGCCAGGCGCTTCCCACTGAAGCCTCTGCCTCTCCCA--GC-----TAGAA-C--------GGCCACCCCTGCAT---GGAGGCGGCTGGCC----------AGCAGGCTGTGGCTGTG---TTTCCTCCCC------AGTACTCAACTCTT-CGTG-------CCCTCCA-AGACACCCCTCCCAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75878582 285 + 122082543 TATCTAGCCTTAGGTGT-------TTCCCCATCAGGTGAA-------------ACGTCAAA----GGG-------------GAAA-TGGATGGGCAGAGGTGAGCAGTTTGTCGTAGTGTCAC-ATGCTCAGAAGACACTTGACTCAGG--GGTTACTATTACTCACGGGGAGGCTACCC----ATGGAAACCACAGGCCCCTA-AAGCACAAAACCAGAGCTTACTCTGCAAAGCTCACCTCTATACCA--GC-----------------------------------AAGGGACCAGCAGGCC----------GGGAGGTT------------TTCTTTTCCCTG----CGTAG-----TCCTCCTTGTGACCTTCCCTCCG-AGAAGTTCCTGTCAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15704803 380 - 61074082 ----taatctcttgtgt-ctccatttttccatcaataaaagagggtaataatagcacccacctatggggttgtgtcaggatgaaa-caaatttatttatgtaaagaatttagtgcagtggcactaaatttagtaaaccctcaaCCTGGGATAGCCGTTACTATTACAATAATAATAACCTTGCCCAAAATGCTGCATGTACCTACA--CACAGTGTGAGGGGCTTCCCACTGAGACCACAGAA---CCCA--GGCAAAGCAGAACCAAGGCGCATGCCAGCTCTCCACTATGGAACAGGCAAGCACTCACTATAGCTCAGGCTAGCCCTCCCCACCCTGCTCCTTGGCCATGCTTGGTAGGTCCTCCTTG-------GCCTTTAAAGAAGGCCCTTTCAG i canFam3.chr9 C 0 C 0 e papAnu2.chr16 144887 0 + 74645514 C e panTro4.chr17 225596 3318 + 82630442 I a score=155355.000000 s hg38.chr17_GL383563v3_alt 251081 121 + 375691 TGACTGTCCACCCA------TCCC---------------------------------------------------------------CATCTGAGAGCG------------------------------------------------------------------TATCCAGCCCGCCCAGCCCTCCCCACCGTCACCCTGA-CCGTCCACCCATCCCCATCTGAGGGCATATCCAGCCCACTCAGCCCTCCCCACC s panTro4.chr17 228914 121 + 82630442 TGACCGTCCACCCA------TCCC---------------------------------------------------------------CATCTGAGAGTG------------------------------------------------------------------TATCCAGCCCACTCAGCCCTCCCCAACGTCACCCTGA-CCGTCCACCCATCCCCATCTTGGGGTGTATGCAGCCCTCCCAGCCCTCCCCACT i panTro4.chr17 I 3318 C 0 s ponAbe2.chr17 114269 187 + 73212453 TGACTGCCCACCCA------TCCT---------------------------------------------------------------CATCTGAGAGCGCATCCAGCCCGCCCAGCCCTCCCCACCGTCACCCAGTGACCGTCCACCCATCCCCATCTGAGGGCATATCCGGCCCGCCCAGCCCTCCCCACCGTCACCCTGA-CCATCCACCCATCCCCATCTGAGAGCACATCCGGCCCGCCCAGCCCTCCCCACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 232156 121 - 81552678 TGACCATCCACCCA------TCCC---------------------------------------------------------------CATCTGAGAGCA------------------------------------------------------------------CATCCGGCCCGCCCAGCCCTCCCcaccatcaccctga-ccatccacccatccccatcTGAGAGCACATCCGGCCCGCCCAGCCCTCCCCACC i nomLeu3.chr19 C 0 I 392 s rheMac3.chr16 143423 120 + 80904711 TGAACGTTCACCCA------CCCT---------------------------------------------------------------CATCTGAGAGCA------------------------------------------------------------------CATCTGTCCCGCTCACCCCTTTCC-CCGTCACCCTGA-CCGTCCACCCATCCCCATCTGAGAGCACATCTGCCCCGCCCAGCCCTGCCCACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 148813 183 + 80997621 TGACCGTTCACCCA------CCCTCATTTGAGAGCACATCTGTCCCGCTCACCCCTTTCCCCGTCACCCTGACCGTCCACCCATCCCCATCTGAGAGCA------------------------------------------------------------------CATCCGCCCCGCCCAGCCCTGCCCACTGCCACCCTGA-CCGTCCACCCATCCCCGTCTGAGAGCACATCCA-CCCGCCCAGCCCTCCCCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 144887 119 + 74645514 tgaccGTCCACCTG------TCCC---------------------------------------------------------------CATCTGAGAACA------------------------------------------------------------------CATCCG-CCCACCCAGTCCTGCCCACCGCCACCCTGA-CCGTCCACCCATCCTCGTCTGAGAGCACATCCA-CCCGCCCAGCCCTGCCCACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 136564 119 + 75148670 TGACCGTCCACCCA------ACCT---------------------------------------------------------------CATCTGAAAGCA------------------------------------------------------------------CATCTTCCCCGTCCACCCCTTTCC-CCGTCACCCTGA-CCGTCCACCCGTCCCCGTCTGAGAGCAAATCCG-TCCACCCAGCCCTCCCCACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 945461 58 - 1291538 TGACCGTCTGCCCA------TCCC---------------------------------------------------------------C-TCTGGGAGCG------------------------------------------------------------------C------CCCGCCCCAC--------CCATCACCCCTC-CTGTCC------------------------------------------------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75878867 62 + 122082543 --------CACCCA------ATGC---------------------------------------------------------------T-------AGTG------------------------------------------------------------------GACCTGGCTC-------------------CACCCTGGTCCATCCACCCTGCCCCACCCAAGCCCAA-------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15705183 62 - 61074082 ----CGACCACCCATGAATTTCCC---------------------------------------------------------------CAAGTGCAAGTG------------------------------------------------------------------TGCTCGG---ACCTGCCCCAGCCCACCTCCACC----------------------------------------------------------- i canFam3.chr9 C 0 I 1 a score=13931.000000 s hg38.chr17_GL383563v3_alt 251202 5 + 375691 GTCAC s panTro4.chr17 229035 5 + 82630442 GTCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 114456 5 + 73212453 GTCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 232669 5 - 81552678 GTCAC i nomLeu3.chr19 I 392 C 0 s rheMac3.chr16 143543 5 + 80904711 GCCAC i rheMac3.chr16 C 0 I 884 s macFas5.chr16 148996 5 + 80997621 GTCAC i macFas5.chr16 C 0 I 1577 s papAnu2.chr16 145006 5 + 74645514 GCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 136683 5 + 75148670 GCCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 945519 4 - 1291538 GCCA- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75878929 5 + 122082543 GCCAC i mm10.chr11 C 0 C 0 s canFam3.chr9 15705246 5 - 61074082 GTTGT i canFam3.chr9 I 1 C 0 a score=3321.000000 s hg38.chr17_GL383563v3_alt 251207 1 + 375691 C s panTro4.chr17 229040 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 114461 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 232674 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 144432 1 + 80904711 c i rheMac3.chr16 I 884 C 0 s macFas5.chr16 150578 1 + 80997621 c i macFas5.chr16 I 1577 C 0 s papAnu2.chr16 145011 1 + 74645514 C i papAnu2.chr16 C 0 I 107 s chlSab2.chr16 136688 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s mm10.chr11 75878934 1 + 122082543 T i mm10.chr11 C 0 I 1 s canFam3.chr9 15705251 1 - 61074082 C i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 945523 0 - 1291538 C a score=6269.000000 s hg38.chr17_GL383563v3_alt 251208 3 + 375691 CTG s panTro4.chr17 229041 3 + 82630442 CTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 114462 3 + 73212453 CTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 232675 3 - 81552678 CTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 144433 3 + 80904711 cTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 150579 3 + 80997621 cTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 145119 3 + 74645514 ctG i papAnu2.chr16 I 107 C 0 s chlSab2.chr16 136689 3 + 75148670 CTG i chlSab2.chr16 C 0 I 7044 s calJac3.chrUn_GL286409 945523 1 - 1291538 --G i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75878936 2 + 122082543 CA- i mm10.chr11 I 1 C 0 s canFam3.chr9 15705252 3 - 61074082 CTG i canFam3.chr9 C 0 C 0 a score=1464050.000000 s hg38.chr17_GL383563v3_alt 251211 593 + 375691 GACGCCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTTGGTGCAGACTTTCTACAAGAGAGAG----GACATGGGGTTGTAAAGAT-TGCAGCCGCTTCCTCCTCC-----------GCCGAGGGGCTCAGACAACTGTAACGAAGGGACACT-TAGCATCTTCCAAG-GAG-CGTCTCTTGCTTC------AGG--ATAGAAGGAATCAATCACCCCAGAGGCACAGCTCATCTAAAAATCCTTAGTTGGCTTTG-GACGTA-----ATGGATGGCCCCAT-CCACGG----------AACCC-------------CCACCCCA--GAGTTAGGTTCTGTTGGAACCACAGCA-------------------------AAGCTTGCTGACAttcacagctgcgtcacgtttgatagcaaagaactggaaacaacacagacgcccaatgccaggggaGGGTCCAGGCAAACACGACAGCACGTGATCTGGCCTTCACACAGCCGACGGCGGTGCTGCCTGGA-------------AATAATGCGATTCAACAAAGAAA-CATACGTTTGCGTATA-----ACCCGAAACTGGCC--TGCGTGTCCGAC-AGGTCAGAAGACACAATCGTGAGAAATGCTGGTAACAACGTGA s panTro4.chr17 229044 593 + 82630442 GACGCCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTTGGTGCAGACTTTCTACAAGAGAGAG----GACATGGGGTTGTAAAGAC-TGCAGCCGCTTCCTCCTCC-----------GCCGAGGGGCTCGGACAACTGTAACGAAGGGACACT-TAGCACCTTCCAAG-GAG-CGTCTCGTGCTTC------AGG--ATAGAAGGAATCAATCACCGCAGAGGCACAGCTCATCTAAAAATCCTTAGTTGGCTTTG-GACGTA-----ATGGATGGCCCCAT-CCACAG----------AACCC-------------CCACCCCA--GAGTTAGGTTCTGTTGGAACCACAGCA-------------------------AAGCTTGCTGACAttcacagctgcgtcgcgtttgatagcaaagaactggaaacaacacagacgcccaatgccaggggaGGGTCCAGGCAAACACGACAGCACGTGATCTGGCCTTCACACAGCCGATGGCGGTGCTGCCTGGA-------------AATAATGCAATTCAACAAAGAAA-CATACATTTGCGTATA-----ACCCGAAACTCGCC--TGCGTGTCCGAC-AGGTCAGAAGACACAGTCGTGAGAAATGCTGGTAACAACGAGA i panTro4.chr17 C 0 I 43 s ponAbe2.chr17 114465 617 + 73212453 GACGCCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCAGGGGAAGCCTCAATCCCACACTTGGTGCAGACTTTCTACAAGAGAGAG----GACATAGGGTTGTAAAGAC-CGCAGCCACTTTCTCCTCT-----------GCCGAGGGGCTCAGACAACCGTAACGAAGGGACACT-TGGCATCTTCCAAG-GAG-CGTCTCATGCTTC------AGG--ATAGAAGGACTCAATCACTCCAAAGGCACAGATCATCTAAAAATCCTTAGTTGGCTTTG-GACATA-----ATGGATGGCCCCAT-CCATGG----------AACCCC---------CCACCGCCCCC--GAGTTAGGTTCTGTTACAATCACAGCA-----------------AAGAAACTAAGCTTGCTgacattcacagctgcatcgtgtttgatagcaaagaactggaaacaacccagacgcccaatgccaggggaGGGTCCAGGCAAACACGACAGCACGTGATCTGGCCTTCACACAGCAGATCACGGTGCTACCTGGAAACA-GGGCAGGCAATAATGCAATTCAACAAAGAAA-CATACATTTGCGTATA-----ACCCGAAACTCGCC--TGCGTGTCTGAC-AGGTCAGAAGACACAATTGTGAGAAATGCTGGTAACAACGTGA i ponAbe2.chr17 C 0 I 45 s nomLeu3.chr19 232678 624 - 81552678 GACGCCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACACTTGGTGCAGACTTTCTACAAGAGAGAG----GACATGGGGTTGTAAAGAC-TGCAGCCGCTTCCTCCTCC-----------GCCAAGGGGCTGGGACGACTGTAACGAAGGGACACT-TGGCATCTTCCAAG-GAG-CGTCTCGTGCTTC------AGG--ATAGAAGGAATCAATCACCCCAAAGGCACAGATCTTCTAAAAATCCTTAGTTGGTTTTG-GACATA-----ATGGACGGCCCCAT-CCACGG----------ACCTCCACGATACAGACGCCCCCCCA--GAGTTAGGTTCTGTTAGAATCACAGCA-----------------AGGACACTAAGCTTGCTGACAttcacagctacatcgtgtttg--agcaaagaactggaaacaacccagatgcccaatgccaggggaGGGTCCAGGCAAACACGACAGCACGTCATCTGGCCTTCACACAGCAGATCACGGTGCTGCCTGGAAATG-GGGCAGGAAATAATGCGATTCAACAAAGAAA-CATACATTTGCGTATA-----ACCCGAAACTGGCC--CGCGTGCCTGAC-AGGTCAGAAGACACAATCGTGAGAAATGCTGGTAACAGCGTGA i nomLeu3.chr19 C 0 I 41 s rheMac3.chr16 144436 614 + 80904711 GACGCCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCGGGGGAGGCCTCGATCCCACACTTGGTGCAGACTTTCTACGAGAGAGAG----GACATGGGGTTGTAAAGAC-GGCAGCCACTTCCTCCTCC-----------ACCAAGGGACTCGGACAACTGTAACGAAGGGACACT-TGGCATCTGCCAAG-GAG-TGTCTCGTGCTTC------AGG--ACAGAAGGAATCAATCACCCC-AAGGCACAGATCATCTAAAAATCCTTAGCTGGCTTTG-GACATA-----ATGGATGGCCCCAT-CCACGG----------TACCG-------------ACTCCCCC--GAGTTCGGTTCTGTTAG--TCACAGCG-----------------AGGAAACTGAGCTTGCTGACGTTCACAGCTGCACCGTGTTTGACAGCAAAGAACTGGATAAAACCGAGACGCCCAGCACC-GGGGAGGGTCCAGGCAAACACGACAGCAGGTGATCTGGGCTTCACACAGCGGGTCACGGTGCTACCTGGAAATG-GAGCAGGAAACAATGTGCTTCACCAAAGAAA-CAGACATTGGCGTAAAATCGTACCCAAAACTCGCC--TGCGGGCCTGAC-ACGTTGGAAGACGCAATCGCGAGAAACACTTATAAGAACGTAA i rheMac3.chr16 C 0 I 43 s macFas5.chr16 150582 614 + 80997621 GACGCCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACACTTGGTGCAGACTTTCTACGAGAGAGAG----GACATGGGGTTGTAAAGAC-GGCAGCCACTTCCTCCTCC-----------ACCAAGGGACTCGGACAACTGTAACGAAGGGACACT-TGGCATCTGCCAAG-GAG-TGTCTCGTGCTTC------AGG--ACAGAAGGAATCAATCACCCC-AAGGCACAGATCATCTAAAAATCCTTAGCTGGCTTTG-GACATA-----ATGGATGGCCCCAT-CCACGG----------TACCA-------------ACTCCCCC--GAGTTCGGTTCTGTTAG--TCACAGCG-----------------AGGAAACTGAGCTTGCTGACGTTCACAGCTGCACCGTGTTTGACAGCAAAGAACTGGATAAAACCGAGACGCCCAGCACC-GGGGAGGGTCCAGGCAAACACGACAGCAGGTGATCTGGGCTTCACACAGCGGGTCACGGTGCTACCTGGAAATG-GGGCAGGAAACAATGTGCTTCACCAAAGAAA-CAGACATTGGCGTAAAATCGTACCCAAAACTCGCC--TGCGGGCCTGAC-ACGTCGGAAGACGCAATCGCGAGAAACACTTATAAGAACGTGA i macFas5.chr16 C 0 I 43 s papAnu2.chr16 145122 627 + 74645514 GATGCCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACACTTGGTGCAGACTTTCTACGAGAGAGAG----GACATGGGGTTGTCAAGAC-GGCAGCCGCTTCCTCCTCC-----------ACCAAGGGACTCGGACGACTGTAACGAAGGGACACT-TGGCATCTGCCAAG-GAG-TGTCTCGTGCTTC------AGG--ATAGAAGGAATCAATCACCTCAAAGGCACAGATCATCTAAAAATCCTTAGCTGGCTTTG-GACATA-----ATGGATGGCCCCAT-CCACGGACCTCCACGATACCG-------------ACTCCCCCCAGAGTTCGGTTCTGTTAG--TCACAGCG-----------------AGGAAACTGAGCTTGCTGACGTTCACGGCTGCACCGTGTTTGACAGCAAAGAACTGGATAAAACCGAGACGCCCAGCACC-GGGGAGGGTCCGGGCAAACACGACAGCAGGTGATCTGGGCTTCACACAGCGGGTCGCGTTGCTACCTGGAAATG-GGGCAGGAAACAATGTGCTTCACCAAAGAAA-CAGACATTCGCGTAAAATCGTACCCAAAACTCGTC--TGCGGGCCTGAC-ACGTCGGAAGACGCAATCGCGAGAAACACTCGTAAGAACGTGA i papAnu2.chr16 C 0 I 43 s calJac3.chrUn_GL286409 945524 613 - 1291538 GACACCCTACCTCTCTTTGCTCACTGCAGATCTTACACAGCCACAGTGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACACTTGGTGCAGACTTTCTACAAGAGAGAG----GACACAGGGTTGTAAAGACTTGCAGCCGCCTCCTCCTCCAGCTGCAGCGGACAGAGGGGCTTCGTCCACTACAACTGAGGGACACT-TGGCATCTCCCAAG-GAG-TGGCTCGTGCTTC------AGG--ACAGAAGGAACCAATCACCCCAAAGGCACAGATAATCCCAAAACCCTTAGTTGGCTGTG-GACATA-----ATGGCTGGCCCCAT-CCACAG----------AT----------------TCTCTCCA--CAGTTAGGTTCTGTTAGAATTGT-GCA------------------GAAAACTAAGCTTGCTGACAttgacaacggcatcattttcaacagcaaagaactggaaataacccaaacgcccagtgccaggggaGGGTCCAGGCAAACACAGCAGCCTGTGATCTGGTCTCCACG-AGCAGATCATGGTGCTACCTGGAAAGG-GGGCAGGAAATGGTGTGATTCAACAAAGAGA-CACACATTTACACATGAGCATACCCAGAGCCCGCC--TGTGCGTCCGAC------------TTCAGACTCGTGAGATGCTGCTAGCAACCTGA i calJac3.chrUn_GL286409 C 0 I 3397 s mm10.chr11 75878938 622 + 122082543 GGATCCCTACCTCTCTCTGCTCACTGCAGATCTTACACAGCCACAGGGGCCGCTTCTGGCCGGGGGAAGCCTCGATCCCACACTTGGTGCAGACTTTCTACGAGAGAGAGGACAGACACGTGAGTGTCAGTAT-TTCGGTTGCTTTCTCCTAG-----------GCTGCGGAGGCAAGGCAGTGAGCCACAAGAGCTACTCTGGCACCTTCTAAGAGGA-CAGGTTCTGCTTTGAGTTAAGG--ACAGG-----------GCTCccagaacacagctaatctaggaatctttggatggctttgcaatctagttgcatggat--ctccatgttacag----------attgc-------------acatccca--taattctgtcctgtaaggaccacatcaaaatcagctAACGGGGGAAAAATATCAGCTAGTCAGC-TCCACAGCACCAGCATGTTCAGCAGCAAAGAACTGGAAATCACCCAAATGCCTAATACCTGGGGAGAATCCAAGCCAACATCAAAG------ACGCTGCCTTCCAGCAGAGGACTGCG--GCTACCTGCAGATGTGGGTGGGAAATGCGATCCTCTCCCAAAGAAAGTACACACTTGCTTAGGAGCAGGCCAGAAACACTCCCACGCGTGCCTGAC-AGGTTAGGGGCCATG-----GAGAGACACATGAA--------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15705255 536 - 61074082 GGCATCCTACCTCTCTCTGCTCACTGCAGATCTTACATAGCCACAGAGGCCGCTTCTGGCCAGGGGAGGCCTCAATTCCACATTTGGTGCAGACTTTCTACAAGAGAGAG----GACATGGGAATGTAAGCAC-TTCAGCTAATTCCTCCTCA-----------GCTTAGGGGCTGAGAAATCTA-ATCAAGGAGCCCTT-TGGCATCTTCCAAG-GGGATGGTGTTAGCTTT------AGGCTGTCAGAGTACCCA---ACTCAGAGGGCACAGATCATCTG--------TAGCTGGCTTTGGGGCACA-----ATGGATGTACCCAT-CCATGC----------ATTCA-------------CCACGATA----------------TAAAGTCATCACT-----------------------------------ACTATCCCCATTACGTTCTGTTTGG-ATCA------------------------------------------CCAGGCAAACA--ACAGAATATGATGTGGCCTTGACTTAGCAGATTGTGTCAATACTTGGTAATGCAGCCAGGAAATGATATTATTCAACACAGAAAACACACTTTTGTATATAACTGCACAAAAACCTCACA--CCTGTGCCTGACAAGGTAAGAAGGTGATTGAGTGAGAAACACCAGTGACAGCTTTA i canFam3.chr9 C 0 I 33 e chlSab2.chr16 136692 7044 + 75148670 I a score=4948.000000 s hg38.chr17_GL383563v3_alt 251804 3 + 375691 -CAG s panTro4.chr17 229680 3 + 82630442 -CAG i panTro4.chr17 I 43 C 0 s ponAbe2.chr17 115127 3 + 73212453 -cag i ponAbe2.chr17 I 45 C 0 s nomLeu3.chr19 233343 3 - 81552678 -CAG i nomLeu3.chr19 I 41 C 0 s rheMac3.chr16 145093 3 + 80904711 -CAG i rheMac3.chr16 I 43 C 0 s macFas5.chr16 151239 3 + 80997621 -CAG i macFas5.chr16 I 43 C 0 s papAnu2.chr16 145792 3 + 74645514 -CAG i papAnu2.chr16 I 43 C 0 s mm10.chr11 75879560 3 + 122082543 -CAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15705824 3 - 61074082 cta- i canFam3.chr9 I 33 C 0 e calJac3.chrUn_GL286409 946137 3397 - 1291538 I e chlSab2.chr16 136692 7044 + 75148670 I a score=98025.000000 s hg38.chr17_GL383563v3_alt 251807 46 + 375691 TTACGTAAACT-----TTGGGcccacgtt--ataggtgaggaacccggggctt s panTro4.chr17 229683 46 + 82630442 TTATGTAAACT-----TCAGGcccacgtt--ataggtgagtaacccggggctt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 115130 46 + 73212453 ttatgtaaact-----tcaggcccatgtt--ataggtgaggaacctggggctt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 233346 46 - 81552678 TTGTGTAAACT-----GCAGGcccatgtt--atcggtgaggaacctgggcctt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 145096 46 + 80904711 TTACGCCAACG-----TCGGGcccacgtt--ataggtgaggaacccggtgctt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 151242 46 + 80997621 TTACGCCAACG-----TCGGGCCCACGTT--CTAGGTGAGGAACCCGGTGCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 145795 46 + 74645514 TTACGCCAACG-----TCGGGCCCACGTT--ATAGGTGAGGAACCCGGTGCTT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 949534 45 - 1291538 ttccataaact-----tgaggcccatttt--ataggtg-ggaacctggggctt i calJac3.chrUn_GL286409 I 3397 C 0 s mm10.chr11 75879563 53 + 122082543 CCGCCTAAGCTCGTGCTTGGTACCACATTTCTCAAGCAAGGATTCCAGGACCT i mm10.chr11 C 0 I 219 s canFam3.chr9 15705827 45 - 61074082 ttatgtaaata-----ttaggcccatttc--acaggtgagcaatctggggtc- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 136692 7044 + 75148670 I a score=247024.000000 s hg38.chr17_GL383563v3_alt 251853 117 + 375691 ggcagagtctgaggatatgctcagg-ttcacatggcAGCCAC-----GGATTCCGGTCGGACTCCAGAGACAGTTTATCATGTTCTCT----GGACGCAGAAATAACCAGAATCTAGAACCTACAGT s panTro4.chr17 229729 117 + 82630442 ggcagagtctgaggatatgctcagg-ttcacatggcagccac-----agattccggtcggactctagagacagtttATCATGTTCTCT----GGACGCGGGAATAGCCACAATCTAGAACCTACAGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 115176 117 + 73212453 ggcagagtctgaggatctgctcagg-ttcacatggcAACCAT-----GGATTCAGGTCAGACTCTAGAGACATTTTATCATGTTCTCT----GGACACAGAAATAGCCAGAATCTAGAATCTACAGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 233392 74 - 81552678 ggcagagtttgaggatttgctcagg-ttca------------------------------------------------caTGTTCTCT----GGACACAGAAATAGCCGGAATCTAGACTCTACAGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 145142 117 + 80904711 ggcagagtctgagggtttgctcaga-tccacatggcAACCAT-----GGATTCAGGTCGCACTCTAGAGACATTTTATCATGTTCTCT----GGACACAGAAATAGCCAGAATCTAGAATCTACAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 151288 117 + 80997621 GGCAGAGTCTGAGGGTTTGCTCAGA-TCCACATGGCAACCAT-----GGATTCAGGTCACACTCTAGAGACATTTTATCATGTTCTCT----GGACACAGAAATAGCCAGAATCTAGAATCTACAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 145841 117 + 74645514 GGCAGAGTCTGAGGGTTTGCTCAGG-TCCACATGGCAACCAC-----GGATTCAGGTTGCACTCTGGAGACATTTTATCATGTTCTCT----GCACACAGAAATAGCCAGAATCTAGAATCTACAGT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 949579 123 - 1291538 ggcagagtttgaggatttgctcaggtttcacgtggcaagcacgtactggattcaggtctgattctagagACATTTTATCATATTCTCT----GGACACAGAAATAGCCAAAAACTGGATTCTACAGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15705872 126 - 61074082 agagtagtttgaaaatttgccccag-ttcacatagcaggtaaatAATGCACTTAGGTATGACTCTAGAGCCATTATATTATTTTCTTTAGACAGACACACAAGTAACCAGAACCTAATTTCTGCAGT i canFam3.chr9 C 0 I 45 e mm10.chr11 75879616 219 + 122082543 I e chlSab2.chr16 136692 7044 + 75148670 I a score=113387.000000 s hg38.chr17_GL383563v3_alt 251970 55 + 375691 CTGCTGATGTGCTGGGCCATCGAAGACCCCACGCCTGGGAGCTTCATGAGAACTG s panTro4.chr17 229846 55 + 82630442 CTGCTGAAGTGCTGGGCCATCAAAGACCCCACACCTGGGAGCTTCATGAGAACTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 115293 55 + 73212453 CTGCTGATGTGCTGGGCCATCAAAGACCCCACGCCTAGGAGCTTCATGAGAACTG i ponAbe2.chr17 C 0 I 323 s nomLeu3.chr19 233466 54 - 81552678 C-GCTGATGTGCTGGGCCATCAAAGACCCCAAGCCTAGGAGCTTCATGAGAACTG i nomLeu3.chr19 C 0 I 323 s rheMac3.chr16 145259 55 + 80904711 CTGCTGACGTGCTGGGCCCTCAAAGACCCCAAGCCCAGGCACTTCATGAGAACTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 151405 55 + 80997621 CTGCTGACGTGCTGGGCCCTCAAAGACCCCAAGCCCAGGCACTTCATGAGAACTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 145958 55 + 74645514 CTGCTGACGTGCTGGGCCCTCAAAGACCCCAAGCCCAGGCACTTCATGAGAACTG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 949702 52 - 1291538 CTGCTGGTGTGCTGGGCCATC--AGATCCCAAGCCCAGGAGCTTC-TGGGAGCTG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75879616 219 + 122082543 I e canFam3.chr9 15705998 45 - 61074082 I e chlSab2.chr16 136692 7044 + 75148670 I a score=132148.000000 s hg38.chr17_GL383563v3_alt 252025 66 + 375691 GAAAGGGGCTTTGCTTTAAGCAAGGTTGATTAAGCTCATAACTTATAAATACAATTACTgttgctt s panTro4.chr17 229901 66 + 82630442 GAAAGGGGCTTTGCTTTAAGCAAGGTTGATTAAGCTCATAACTTATAAATACAATTACTgttgctt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 115671 66 + 73212453 GAAAGGGGCTTTGCTTTAAGCAAGGTTGATTAAGCTCATAACTTATAAATACAATTACTgttgctt i ponAbe2.chr17 I 323 C 0 s nomLeu3.chr19 233843 66 - 81552678 GAAAGGGGCTTTGCTTTAAGCGAGGTTGATTAAGCTCATAACTTATAAATACAATTAgtgttgctt i nomLeu3.chr19 I 323 C 0 s rheMac3.chr16 145314 66 + 80904711 TAAAGGGGCTTTGCTTTAAGCAAGGTTGATTAAGCTCATAATTTATAAATACAGTTAGTGTTACTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 151460 66 + 80997621 TAAAGGGGCTTTGCTTTAAGCAAGGTTGATTAAGCTCATAATTTATAAATACAGTTAGTGTTACTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 146013 66 + 74645514 TAAAGGGGCTTTGCTTTAAGCAAGGTTGATTAAGCTCATAATTTAGAAATACAGTTAGTGTTACTT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 949754 46 - 1291538 GAAAGGAGCTTTGCT--------------TTAAACTCATAACT------TACCATTACTgtcgctt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75879616 219 + 122082543 I e canFam3.chr9 15705998 45 - 61074082 I e chlSab2.chr16 136692 7044 + 75148670 I a score=42940.000000 s hg38.chr17_GL383563v3_alt 252091 15 + 375691 aaaaacaagaatatg s panTro4.chr17 229967 15 + 82630442 aaaaacaagaatatg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 115737 15 + 73212453 aaaaacaagaatatg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 233909 15 - 81552678 aaaaacaagaaaatg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 145380 15 + 80904711 AAAAACAAGATTATG i rheMac3.chr16 C 0 I 546 s macFas5.chr16 151526 15 + 80997621 AAAAACAAGACTATG i macFas5.chr16 C 0 I 127 s papAnu2.chr16 146079 15 + 74645514 AAAAACAAGACTatg i papAnu2.chr16 C 0 I 127 s chlSab2.chr16 143736 15 + 75148670 aaaaacaagaCtacg i chlSab2.chr16 I 7044 C 0 s calJac3.chrUn_GL286409 949800 15 - 1291538 aaaaacaagaatatg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75879616 219 + 122082543 I e canFam3.chr9 15705998 45 - 61074082 I a score=8830.000000 s hg38.chr17_GL383563v3_alt 252106 7 + 375691 tcctgag s panTro4.chr17 229982 7 + 82630442 tcctgag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 115752 7 + 73212453 tcctgag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 233924 7 - 81552678 tcctgag i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 143751 7 + 75148670 tcctgag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 949815 7 - 1291538 tctcgag i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75879616 219 + 122082543 I e canFam3.chr9 15705998 45 - 61074082 I e papAnu2.chr16 146094 127 + 74645514 I e rheMac3.chr16 145395 546 + 80904711 I e macFas5.chr16 151541 127 + 80997621 I a score=544054.000000 s hg38.chr17_GL383563v3_alt 252113 281 + 375691 aaaaggcacagtgaggtgattgcatcattgtgcaaacagcacatagagca----cacttacgcaaaccaagatggtatagccggctgcacacccaggctagctgctgtattctgtggctgctaggccacaaacctgaacgacatgttactgtaccgaaggctgcaggcaactgtgacacagcggaaagtattcctgtatctaaatatatcatagaaatggtacagtaagaatgtggtattataatggtgtggg---acatttgctggccgaaacgtcattatgtgatg s panTro4.chr17 229989 280 + 82630442 aaaaggcacagtgaggtgactgcaccattgtgcaagcagcacatagagca----cgcttacgcaaaccaagatggtatagccggctgcacacccaggctagctgctgtattctctggctgctaggctac-aacctgaacgacatgttaccgtaccgaaggctgcaggcaactgtgacacagcggaaagtattcctgtatctaaatatatcatagaaatggtacagtaagaatgtggtattataacagtgtggg---acatttgctggccgaaacgtcatcatgtgatg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 115759 279 + 73212453 aaaaggcacagttaggtgattgcaccattgtgcaaataccacatagagca----cacttacacaaaccgagatggtatagccggctgcacacccaggctagctggtgtattc--tggctcctaggctacaaacctgcacaacatgtttctgtaccgaatgctgcaggcaactgtgacacagcggaaagtatttctgtatctaaatatatcatagaaatggtacagtaagaatgtggtattataatggtgtggg---acatttgttggccgaaacgtcattaggtgatg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 233931 269 - 81552678 caaaggcacagttaggtgattgcaccattgtgcaaataccacatagagca----ca------------gaggtggtatggccggctgcacacctaggctagctggtgtattctatggctcctaggctacaaaccggtacaacatgttactataccgaatgctgcaggcaactgtgacacagcggaaagtatttctgtatctaaatatatcatagaaatggtacagtaagaatgcggtattataatggtgtggg---acatttgttggccgaaacgtcattgtgtgatg i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 151668 281 + 80997621 aaaaGgcactgttaggtgatcgcaccattttgcaaataccacatagagca----cacagacacacaccgagatggtgcagccggctgcacaccgaggctcgctggtgtattctggggcccccagggtgcgaacctgtacaacgtgctactgtaccgaatgccgcaggcaactgtgacacagcggaaggcatttctgtatctaaatatatcgtagaaatgggacagtaagaatgtggtatgataacggggtggg---acatttgttggccgaaacgtcattatgggatg i macFas5.chr16 I 127 C 0 s papAnu2.chr16 146221 281 + 74645514 aaaaggcacTGTTAGGTGATCGCACCATTTTGCAAATACCACATAGAGCA----CACAGACACACGCCGAGATGGTGCAGCCGGCTGCACACCCAGGCTCGCTGGTGTATTCTGGGGCCcccaggctgcaaacctgtacgaTGTGCTACTGTACCGAATGCCGCAGGCAACTGTGACACAGCAGAAGGCATTTCTGTATCTAAATATATCGTAGAAATGGTACAGTAAGAATGTGGTATGATAACGGGGTGGG---ACATTTGTTGGCCGAAACGTCACTATGGGATG i papAnu2.chr16 I 127 C 0 s chlSab2.chr16 143758 281 + 75148670 aaaaggcactgttaggtgattgcaccattttgcaaataccacatagagca----cacagacacacaccgagatggtgcagccggctgcacacccaggctcgctggtgtattctagggcccccaggctgcaaacctgtacgacgtgctactgtaccgaatgccgcaggcaactgtgacacggcggaaggtatttctgtatctaaatatgtcgtagaaacggtacagtaagaacgtggtatgataacggggtggg---acatttgttggccgaaacgtcattatgtgatg i chlSab2.chr16 C 0 I 73 s calJac3.chrUn_GL286409 949822 281 - 1291538 aaaatgccttgtgaggtgactgcatcgctgtgcaaacaccatataaagtatttgcacttacacaaacctcagtggggtagctggctgca---ctaggctagctggtatactc--tgcttcccaggctacaaccctgtatgacatgttactgtaccgaatgctgaaggcaactgtaaca--acacaaagtatttctgtctctaaatatatcatagaaatagtacagtaaaaacccagtgttagaatggcaggggaccacattagctgagtgcaatgttgttacgtgatg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75879616 219 + 122082543 I e canFam3.chr9 15705998 45 - 61074082 I e rheMac3.chr16 145395 546 + 80904711 I a score=9817.000000 s hg38.chr17_GL383563v3_alt 252394 8 + 375691 caggacAG s panTro4.chr17 230269 8 + 82630442 caggacAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 116038 8 + 73212453 caggaccg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 234200 8 - 81552678 caggactg i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 151949 8 + 80997621 cgtgactg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 146502 8 + 74645514 CGTGACTG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 950103 8 - 1291538 catgactg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75879616 219 + 122082543 I e canFam3.chr9 15705998 45 - 61074082 I e chlSab2.chr16 144039 73 + 75148670 I e rheMac3.chr16 145395 546 + 80904711 I a score=151.000000 s hg38.chr17_GL383563v3_alt 252402 4 + 375691 -TTCT s panTro4.chr17 230277 4 + 82630442 -TTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 116046 4 + 73212453 -GACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 234208 4 - 81552678 -GACT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 151957 4 + 80997621 -GACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 146510 4 + 74645514 -GACT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 950111 4 - 1291538 -TACT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15706043 4 - 61074082 TTTC- i canFam3.chr9 I 45 C 0 e mm10.chr11 75879616 219 + 122082543 I e chlSab2.chr16 144039 73 + 75148670 I e rheMac3.chr16 145395 546 + 80904711 I a score=63267.000000 s hg38.chr17_GL383563v3_alt 252406 46 + 375691 TACGTTGCTTCCCCTGAAGGCACAGCAACA--------------AGGCCAGAAGAAGCAA s panTro4.chr17 230281 46 + 82630442 TACGTTGCTTCCCCTGAAGGCACAGCAACA--------------AGGCCAGAAGAAGCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 116050 43 + 73212453 TAGGTTGCTTTCCCTGAACGCACAG---CA--------------AGGCCAGAAGCAGCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 234212 46 - 81552678 TGTGTTGCTTTCCCTGAATGCACAGCAACA--------------AGGTCAGAAGAAGCAA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 151961 60 + 80997621 TCTGTTGCTTCCCCTGAATGCGCGGCCACAAGCAGAGGTGGGACAGGCCAGAGGCCGCAT i macFas5.chr16 C 0 I 66 s papAnu2.chr16 146514 60 + 74645514 TCTGTTGCTTCCCCTGAACGCGCGGCCACAAGCAGAGGTGGGACAGGCCAGAGGCCACat i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 950115 52 - 1291538 TACCTTCCTTCCCCTAAATGCACAGCAACAAGCAGA--------GGTATGAAAGCAGCAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75879835 51 + 122082543 TACTTTGCTTTCCCTAGAGGCCCAGCAACAAGCAATGGCAAGAAAGGCCAG--------- i mm10.chr11 I 219 I 7 s canFam3.chr9 15706047 60 - 61074082 CATCTTGCTTCTCTGAAACACATAGCAACAAGCGGGGGTGGGCAAGGTCAAATGAAATCC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 144039 73 + 75148670 I e rheMac3.chr16 145395 546 + 80904711 I a score=955565.000000 s hg38.chr17_GL383563v3_alt 252452 279 + 375691 GCTGGGAGGCAGAGGTGGATGTGTTGGGGCTGAGACCGGCTCCAGGCTAACCCAGGCAGAGTCTGATTCAGCGATCGCTGGCGACTCCTC--AGGACTGTTGCCCCAGCTCATCCATCTTTCTGCCACACGGAAGCCACCCGGTCCCTGCGTGGGT-GGGGGCTCTCTGCAGCCCCCCGCCG---AGGGAAGGTTGCATCTGTTGCTTGGCCTTTTCTGCAGGCTGCCAACTCAGCAAGGAGCACGTCTCTCCATGGAGAGGGAAAATGTCACCAACTTGGCTTC s panTro4.chr17 230327 279 + 82630442 GCTGGGAGGCAGAGGTGGATGTGTTGGGGCTGAGACCGGCTCCAGGCTAACCCAGGCAGAGTCTGATTCAGCGATCGCTGGCGACTCCTC--AGGACTGTTGCCCCAGCTCATCCATCTTTCTGCCACACGGAAGCCACCTGGTCCCTGCGTGGGT-GGGGGTTCTCTGCAGCCCCCCGCCG---AGGGAAGTCTGCATCTGTTGCTTGGCCTTTTCTGCAGGCTGCCAACTCAGCAAGGAGCACGTCTCTCCGTGGAGAGGGAAAATGTCACCAACTTGGCTTC i panTro4.chr17 C 0 I 1153 s ponAbe2.chr17 116093 279 + 73212453 GCTGGGAGGCAGAGGTGGATTTGTTGGGGCTGAGACCGGCTCCAGGCTAACCCAGGTAGAGTCTGATTCAGCAATAGCTGGCGACTCCTC--GGGACTGTTGCCCCAGCTCATCAATCTTTCTGCCACACGGAAGCCACCCGGTCCCTGCGTGGGT-GGGTGCTCTCTGCAGCCCCCCGCCG---AGGGAAGGCTGCATCTGTTGCTTGGCCTTTTCTGCAGGCTGCCAACTCAGCAAGGAGCACCTCTCTCCATGGAGAGGAAAAATGTCACCAACTTGGCTTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 234258 278 - 81552678 GCTGGGAGGCAGAGGTGGATTTGTTGGGGCTGAGACCGGCTCCAGGCTAACCCAGGCAGAGTCTGATTCAGCGATAGCTGGCGACTCCTC--AGGACTGTTGCCCCAGCTCATCAATCTTTCTGCCACGCGGAAGCCACCGGGTCCCTGCATGGGT-GGGGGCTCTCGGCAG-CCCCCGACG---AGGGAAGGCTGCATCTGTCGCTTGGCCTTTTCCGCAGGCTGCCAGCTCAGCAAGGAGCACGTCTCTCCACGGAGAGGAAAAATGTCACCAACTTGGCTTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 145941 269 + 80904711 GCTGGGAGGCCGAGGTGGATCTGCTGGGGCTGAGGCCGGTTCCAGGCTGACGCCGGCGGAGTCTGACTCAGCGATAGCTGGCGACGCCTC--AGGACTGGTGCCCCAGCTCATCCATCTTTCTGCCACACG---------CGGTCCCTGCGTGGGT-GGGGGCTCTCTGCAG-CCCCCGCCG---AGGGAAGGCGGCATCTGCTGCTTGGCCTTTTCTGCAGGCTGCCAACTCAGCAAGGAGCTCACCTCTCCACGGAGAGGAAAAAGGTCACCAACTTGGCTTC i rheMac3.chr16 I 546 C 0 s macFas5.chr16 152087 269 + 80997621 GCTGGGAGGCCGAGGTGGATCTGCTGGGGCTGAGGCCGGTTCCAGGCTGACGCCGGCGGAGTCTGATTCAGCGATAGCTGGCGACGCCTC--AGGACTGGTGCCCCAGCTCATCCATCTTTCTGCCACACG---------CGGTCCCTGCGTGGGT-GGGGGCTCTCTGCAG-CCCCCGCCG---AGGGAAGGCGGCATCTGTTGCTTGGCCTTTTCTGCAGGCTGCCAACTCAGCAAGGAGCTCACCTCTCCACGGAGAGGAAAAAGGTCACCAACTTGGCTTC i macFas5.chr16 I 66 C 0 s papAnu2.chr16 146574 269 + 74645514 gctgggaggccgaggtggatctGCTGGGGCTGAGGCCGGCTCCAGGCTGACCCCGGCGGAGTCTGATTCAGCGATAGCTGGCGACGCCTC--AGGACTGGTGCCCCAGCTCATCCATCTTTCTGCCACACG---------CGGTCCCTGCGTGGGT-GGGGGCCCTCTGCAGCCCCCCGCCG---AGGGAAGGCGGCATCTGTTGCTTGGCCTTTTCTGCAGGCTGCCAACTCAGCAAGGAGCACACCTCTCCACGGAGAGG-AAAAGGTCACCAACTTGGCTTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 144112 268 + 75148670 GCTGG--GGCTGAGGTGGATCTGCTGGGGCCGAGGCCGGCTCCAGGCTGACGCCGGCGGAGTCTGATTCAGCGATAGCTGGCGACGCCTC--AGGACTGGTGCCGCAGCTCATCCATCTTCCTGCCACACA---------CGGTCCCTGCGTGGGT-GGGGGCTCTCTGCAGCCCCCCGCCG---AGGGAAGGCGGCATCTGTTGCTTGGCCTTTTCTGCAGGCTGCCAACTCAGCAAGGAGCACACCTCTCCACGGAGAGGAAAAAGGTCACCAACTTGGCTTC i chlSab2.chr16 I 73 C 0 s calJac3.chrUn_GL286409 950167 275 - 1291538 GCTGCGAGGCAGAGGCAGA-CTGCTGGGGCTGAGACTGGCTGCAGGCAAACCTGGG-AGAGTCTGATTCAGCGATAGCTGGCGACTCCTC--AGGACCCATGCCCCAGCTCATCCATCTTTCTGCCACATGGAAGCCACCTGGTCCCTGCATGAGT-GGGGGCTCTCTGCAGCCCCCCGCCA---AGGAAAGGCTGGATCTGTGGCTTGGCCTTTTC-ACAGGCTGCCAACTGAGGAAGGAGCACACCTCTCCATGGAGAGG-AAAATGTCACCAACTTGGCTTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75879893 222 + 122082543 CCTGGGAGGCAGAGGTGGATTTGTTGAGGCTGAGACTGGTTCTCAGCCTACCAGGG--GCATGTGATTGAAAAATGG-TGGCTTTTCCTG--AGGGAT-TTACAGAGGCTC-----------------------------CTGTCCCTACAGGG------------------------ACCG---AGGGAAGGGTGGATCTGTTGTTTGGCCTTTGCTGCAGACTGCCAACTGAGCAAGAGACACATCTCTCCGTGGAGAGA-GAAATGTCACCAACTTGGCTTT i mm10.chr11 I 7 C 0 s canFam3.chr9 15706107 282 - 61074082 ACAGGGAAGCAAAGGGAGACTTCGTGAGGCTGAGATGAGTTTCCAGCAAACCCAGGCAGAGGATGATTCAGTGACAG-TGCGTCCTCCTCAGAGAGCTGTCCCACCGGCTAATCAATCTTCCTACCGCAGGGCAGCTGCCCGGTCTCTGCCAGGCTGGGGGGCTCTCTCCTGTCTCCCGCCACCCAGGGAAGTCCAGAGCTGTAGCTTGGCCTTTTCTGCAGGCTGCCAACTGAGCAAGAAGCACA-CTCTCCTCCGAGAGG-AAAATGTCACCAACTTGGCTTC i canFam3.chr9 C 0 C 0 a score=321288.000000 s hg38.chr17_GL383563v3_alt 252731 145 + 375691 CACGTCGAGCGTGTCGAGCGTGTGGAGGTCACTGGCCTGATCGGGTGGCCGAGCTCAGTGCCC--CTGGGGTG--G-GGGAGCAAACTCACGG-GGGACGGAAGCTATGATACATTCCTGCG-----GGGGACGGATTTGCTACCATCCAATGctc s ponAbe2.chr17 116372 145 + 73212453 CATGTCGAGCGTGTCAAGCGTGTCGAGGTCACTGGCCTGATTGGGTGGCTGAGCTCAGTGCCC--CCGGGGTG--G-AGGAGCAAACTCACAG-GGGACGGAAGCTATGATACATTCCTGCG-----GGGGACAGATTTGCTACCATCCAATGctc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 234536 145 - 81552678 CATGTCGAGCGTGTCGAGCGTGTGGAGGTCACTGGCCTGATTGGGTGGCTGAGCTCAGTGCCC--CCGGGGTG--G-GGGAACAAACTCACAG-GGGACGGAAGCTATGATACATTCCTGTG-----GGGGACGGATTTGCTACCATCCAATGCTC i nomLeu3.chr19 C 0 M 100 s rheMac3.chr16 146210 136 + 80904711 ---------CGTGTCGAGCGTGTGGAGGTCACTGGCCCGATCGGGCGGCTGAGCTCAGTGCCC--CGGGGAGG--G-GGGAGCAAGCTCACGG-GGGACGGAAGCTACGGTACGTTCCTGCG-----GGGGACGGATTTGCTACCCTCCAACGGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 152356 136 + 80997621 ---------CGTGTCGAGCGTGTGGAGGTCACTGGCCCGATCGGGCGGCTGAGCTCAGTGCCC--CGGGGAGG--G-GGGAGCAAGCTCACGG-GGGACGGAAGCTACGGTACGTTCCTGCG-----GGGGACGGATTTGCTACCATCCAACGGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 146843 136 + 74645514 ---------CGTGTCGAGTGTGTGGAGGCCACTGGCCCGATCGGGCGGCTGAGCTCAGTGCCC--CGGGGAGC--G-GGGAGCAAGCTCACGC-GGGACAGAAGCTACGGTACGTTCCTGCG-----GGGGACGGATTTGCTACCATCCAACAGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 144380 136 + 75148670 ---------CGTGTCGAGCGTGTGGAGGTCACTGGCCCGATCGGGCGGCTGAGCTCAGTGCCC--CGGGGAGG--G-GGGAGCAAGCTCACGG-GGGACGGAAGCTCCGGTACGTTCCTGCG-----GGGGACGGATTTGCTACCATCCAATGGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 950442 137 - 1291538 ---CCAAAGCATGTC------------GTCACTGGCCTGATTTGGTGACTGAACTCAGTGCTC--CTGGGGTGGCG-GGGGGCAAGCTCACAG-GGGAGGGAAGCTATGATACATTCCGGGGGATGAGGGGATGGATTTGCTACCATCCAATCCTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75880115 124 + 122082543 ------------CCCAGGCGTGT----ATTACCAGCCTGGTTGGGCGGCCAAGC-CTGTGCTCTGCAGGAATG--GCGGGAGCCGGCACACTC-AGAAGGGAAGCAATGATGCATGTGTGT------GGGCAGGGGTTGGCCACCATCCA------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15706389 127 - 61074082 ---CCAGAACATGTC------------GTCAC---CCGGCTCAGGTGGCTGAGCCCAGCGCTG--C-AGGAGG--T-GGGACTCAGCTCTCAGCAGAAGGAAAGCTGTGATACATTTGTGGG-----GGGTAGACATTTTCTATCATTTGACactc i canFam3.chr9 C 0 C 0 e panTro4.chr17 230606 1153 + 82630442 I a score=283475.000000 s hg38.chr17_GL383563v3_alt 252876 142 + 375691 aggtacgagaaatgtcac----cttttatttatccaaagaaaatgcaatctgctccaagctcctgtccctctggattggcaggaaaat--ctgcccaagcctcagcca-cacttggggcccctttcca-gctctcatgaaggtcctaggc s ponAbe2.chr17 116517 146 + 73212453 aggtacgagaaatgtcacctctcttttatttctccaaataaaatgcaatctgctccaagctcctgtccctctgggttggcaggaaaat--ctgcccaagcctcagcca-cacttggggcccctttcca-gctctcatgaaggtgctaggc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 146346 146 + 80904711 AGgttcgagaaatgtcacctctcttttaattctccaaataaaacgcaatctgctgcaagctcctgtccctctggg-tggcaggaaaat--ctgcccaagcctcggcca-cacttagggcccctttccaagctctcacagaggtcccaggc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 152492 146 + 80997621 AGgttcgagaaatgtcacctctcttttaattctccaaataaaacgcaatctgctccaagcttctgtccctctggg-tggcaggaaaat--ctgcccaagcctcggcca-cacttagggcccctttccaagctctcacagaggtcccaggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 146979 146 + 74645514 AGGTTCGAGAAATGTCACCTCTCTTTTAATTCTCCAAATAAAACGCAATCTGCTCCAAGCTCCTGTCCCTCTGGG-TGGCAGGAAAAT--CTGCCCAAGCCTCGGCCA-CACTTAGGGCCCCTTTCCAAGCTCTCATGAAGGTCCCAGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 144516 146 + 75148670 AGgttcgagaaatgtcacctctcttttatttctccaaataaaacacaatctgctccaagctcctgtccctctggg-tggcaggaaaat--ctgcccaagcctcggcca-cacttagggcccctttccaggctctcacgaaggtcccaggc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 950579 134 - 1291538 CAATATGagaaatgttgcctcgcttttatttctccgaataaaatgcaatctgctccaagctcctgtccctctgggttggaaggaaaa--------------tcagcca-taattggggcccctttccg-gctcttaagaaggtcctaggc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75880239 136 + 122082543 -----------AAGTCACTTCTCTGGT--TTTTCTAAACAAAGTGGAATCTGCTCTAAGGCCCTGTTTCTCGGAGCTGGCAGCAAGGTCCCTTCTCAGGTTCCAGGCAGCACAGGGGGTTCCTTACTG-GCTCTCAGGAAAGTCCTAGCT i mm10.chr11 C 0 I 4 s canFam3.chr9 15706516 111 - 61074082 aggtatgagaagtgtca-----cttttatttctccaaataaaatggaatctgcttcaagctcttgtctgtcggggctagaagagacat--ctaccca--------------------------------gctcttgtgaaggtcctatgc i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 234681 100 - 81552678 M e panTro4.chr17 230606 1153 + 82630442 I a score=465607.000000 s hg38.chr17_GL383563v3_alt 253018 219 + 375691 ttggggtgtttgatggcccag------atctgcagagggtcccctgagc----------------------------------------------------------------------------g--ccgtcca-cactcctcactgctggcc--------ttct---------tgcttcccaa----gctctca------tgaccccatgagagggagtgggagcatgtggtcatatctgtgccagtcctgggtttgggatcat-tgctaggctgggc---ttcagcccttccaaggaccagtagcctgtctccctggaaccctaggccacca s ponAbe2.chr17 116663 222 + 73212453 ttggggtgttcgacggcccag---cacatctgcagagggtcccctgact----------------------------------------------------------------------------g--ctgtcca-cactcctcactgctggcc--------tgct---------tgcttcccaa----gctctca------cgggcccttgagagggagtgggagcatgtggccgtatctgtgccagtcttgggtttgggatcat-tgctaggctgggc---ttcagcccctccaaggaccagtagcctgtccccctggaaccctaggccacca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 234781 213 - 81552678 TTGGGGTGTTTGATGGCCCAG---CACATCTGCAGAGGGTCCCCTGAGT----------------------------------------------------------------------------GTTCTGTCCA-CACTCCTCA-------------------CC---------TGCTTCCCAA----GATCTTG------TGGCCCCTTCAGAGGGAGTGGGAGCATGTGGCCATATCTGTGCCAGTCTTGGGTTTGGGATGGT-TGCTAGGCTGGGC---TTCAGCCCCTCCCAGGACCAGTAGCCTGTCCCCCTGGAACCCTAGGCCACCA i nomLeu3.chr19 M 100 C 0 s rheMac3.chr16 146492 221 + 80904711 ttggggtgtttgacggcccag---cccatctgcagagggtcccctgagc----------------------------------------------------------------------------g--ccatcca-tac-cctcactgctggcc--------tgct---------tgctgcccag----gctcttg------tggcccctggagagggaaggggagcacgtggccacgtctgtgccagtcttgggtctcggactgt-tgctaggctgggc---ttcagccccTCCAAGGACCGGTAACCTGTCCCCCTGGAACTCTAGGCCTCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 152638 221 + 80997621 ttggggtgtttgacggcccag---cccatctgcagagggtcccctgagt----------------------------------------------------------------------------g--ccatcca-tac-cctcactgctggcc--------tgct---------tgctgcccag----gctcttg------tggcccctggagagggaaggggagcacgtggccacgtctgtgccagtcttgggtctcggactgt-tgctaggctgggc---ttcagccccTCCAAGGACCGGTAACCTGTCCCCCTGGAACTCTAGGCCTCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 147125 222 + 74645514 TTGGGGTGTTTGACGGCCCAG---CCCATCTGCAGAGGGTCCTCTGAGC----------------------------------------------------------------------------G--CTGTCCA-TACACCTCACTGCTGGCC--------TGCT---------TGCTGCCCAG----GCTCTCG------TGGCCcctggagagggagggggagcACGTGGCCACGTCTGTGCCAGTCTTGGGTCTCGGACTGT-TGCTAGGCTGGGC---TTCAGCCCCTCCAAGGACCGGTAACCTGTCCCCCTGGAACTCTAGGCCACCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 144662 222 + 75148670 ttggggtgtttgacggcccag---cccatctgcagagggtcccctgggc----------------------------------------------------------------------------g--ccgtcca-cacacctcactgctggcc--------tgct---------tgcttcccaa----gctctcg------tggcccctggagagggagggggagcacgtggccacatctgtgccagtcttgggtctgggactgt-tgctaggctgggc---ttcagccccTCCAAGGACTGGTAGCCTGTCCCACTGGAACCCTAGGCCACGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 950713 295 - 1291538 ttggggtctctgatggcccag---cacatctgcagagggtaccgtgagccatccacactcctcactgctggcctgctgcttcccaagctcTCTGAGGCCCAACacatctgcagagggtccactgag--tcgtcca-cactcctcactgctggcc--------tgc----------tgcttcccaa----gctctca------tggaccctcgaaaggcagtgggagcacttgaccatccttgtgtctgtcttgggttt-ggatcgt-tgctagactggct---tccagcctctccagagaccagtagcctgtccc-ctggagccctaggccacta i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75880379 241 + 122082543 TCTTGGTGTTTG-TGGCCAAG---CACGTAAG-GGAGTGTCCTCTCAGA----------------------------------------------------------------------------G--CTGCCCATTGCTCCTCGGAGATGCTCCTTGGAGATGCTCCCTGGGAGTGCTCCCTGGGTGTGCTCTCAGCTCTCTGGGCCTTTTGAAGGAAGAGGCAGC----TACCAAAC---TGTTAGCCCTGCCTTT-GGACCAT-TTACAGGTAGGGCATAGTAAGCCTTCCCAGGAATTAGCAGCTCATCTCCTAG--ACTATAGGCCACCA i mm10.chr11 I 4 C 0 s canFam3.chr9 15706627 208 - 61074082 ttggggtcttgggtggtgtggttccccatctgggaaggggtcagtgagt----------------------------------------------------------------------------g--ctgtctg-ggctgctcactgctgtgc--------ttctc--------tccctcctgg----gctccca------cagtccctc-agagggggaagaggccc--agccacttctgtaccaggcctgggcttggaaatctgtgacaggctgggG---CTT-GTGTCACCAGGGGCCAAAAGCC---------------CTGGGCTGACC i canFam3.chr9 C 0 C 0 e panTro4.chr17 230606 1153 + 82630442 I a score=214881.000000 s hg38.chr17_GL383563v3_alt 253237 110 + 375691 tccctcacagagACTGGTGACTCTCCCCTTCCCCAAGAGAGCAGCCTCTCTCCACCTCTTCCACCCTTCGCTCCTAATGTTCCCACC-TCTACAACAGGGTCCCCCATCAG s ponAbe2.chr17 116885 110 + 73212453 tccctcagacagtctggtgactctccccTTCCCCTAGAGAGCAGCCTCTCTCCACCTCTTCCACCCTTCGCTCCCAATGTTTCTACC-TCTACAACAGGGTCCCCCATCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 234994 110 - 81552678 TCGCTCACACAATCTGGTGACTCTCCCCTTCCCCAAGAGAGCAGCCTCTCTCCACCTCTTGCTCCCTTCGCTCCCGACATTCCTGCC-TCTACAACAGGGTCCCCCATCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 146713 101 + 80904711 TCCCTCACACAGTCCGGTGACTCTCCCCTTCCCCAAGAGAGCAGCCTCTCTCCA--CCTCCCACCTTTTGCTCCCAATCTT-------TCTACAACAGGG-ACCCCATCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 152859 101 + 80997621 TCCCTCACACAGTCCGGTGACTCTCCCCTTCCCCAAGAGAGCAGCCTCTCTCCA--CCTCCCACCTTTTGCTCCCAATCTT-------TCTACAACAGGG-ACCCCATCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 147347 109 + 74645514 TCCCTCACACAGTCCGGTGACTCTCCCCTTCCCGAAGAGAGCAGCCTCTCtccacccctcccacccttcGCTCCCAATCTTTCTACC-TCTACAATAGGG-ACCCCATCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 144884 107 + 75148670 TCCCTCAAACAGTCCGGTGACTCTCCCCTTCCCCAAAAGAGCAGCCTCTCTCCA--CCTCCCACCCTTCACTCCCAATCTTTCTACC-TCTACAGCAGGG-ACCCCATCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 951008 109 - 1291538 tcccTCACATAGTCTGGTGACCCTCCCCTTCTCCAAGAGAGCTGCCTCTCTCCACCCCTCCCACCATTTGCTTCCAATTCTTCTACC-TCAACAACAGGG-TCCCCGTCTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15706835 76 - 61074082 TCTCTGACCTAGTCTGGGGATT----------------------------------CCTCCTACCCCAC-CTGACAACTGTTCTACCACCTAGGACAGGGGCTCCCATAAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75880620 0 + 122082543 C e panTro4.chr17 230606 1153 + 82630442 I a score=271370.000000 s hg38.chr17_GL383563v3_alt 253347 132 + 375691 CCTATGAGGTGGGCTCC--AGAACCACAACGTGGGCCTCTCCTCTCTGGGTAAAGGGGAGA----GGAAGCACTGATGCTACTTAGCTCTGTTTTCCTTGCGAATTCCCACCATCCCTGTGTACACTG-TAACAGGTGG s ponAbe2.chr17 116995 132 + 73212453 CCCATGAGGTGGGCTCC--AGAACCACAACGTGGGCCTCTCCTCTCTGGGTAAAGGAGCAA----GGAAGCACTGATGCTAGTTAGCTCTGTTTTCCTTGCAAATTCCCAGCATCCCTGTGTACACGG-TAACAGGTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 235104 131 - 81552678 CCCACGAGGTGGGCTCC--AGTTCCACAACCTGAGCCTCTCTTCTCTGGGTAAAGGAGAAA----GGAAGCACTGATGCCAGTCAGCTCTG-TTTCCTTGCAGATTCCCACCATCCCTGTATACACGG-TAATAGGTGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 146814 136 + 80904711 CCTGTGAGGTGGGTTCC--AGAACCACAGCGTGGGCCTCTCCTCTCTGGGTAAAGGAGAAAGAAGGGAGGCACTGATGCTCGTTAGCTCCGTTTTCCTTGCAGATTCCCAGCATCGCTGTGTACACGG-GAACAGGTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 152960 136 + 80997621 CCTGTGAGGTGGGTTCC--AGAACCACAGCGTGGGCCTCTCCTCTCTGGGTAAAGGAGAAAGAAGGGAGGCACTGATGCTCGTTAGCTCCGTTTTCCTTGCAGATTCCCAGCATCGCTGTGTACACGG-GAACAGGTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 147456 136 + 74645514 CCTGTGAGGTGGGTCCC--AGAACCACAGCGTGGGCCTCTCCTCTCTGggtaaaggagaaagaagggaggcaCTGATGCTCCTTAGCTGCGTTTTCCTTGCAGATTCCCAGCATCGCCGTGTACACGG-GAACAGGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 144991 136 + 75148670 CCCATGAGGTGGGTCCC--AGAACCACAGCGTCGGCCTCTCCTCTCCGGGTAAAGGAGAAAGAAGGGAGGCGCTGACGCTCGTTAGCTCCATTTTCCTTGCAGATTCCCAGCATCGCTGTGTACACGG-GAACAGGTGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 951117 122 - 1291538 CCCATGAGGCAGGCTCC--AGAAACACAATGTGGGC---------------AAAGGAGAGAGAAAGGAAGTGCCGGTGCTGGTTAGCTCTGGTTTCCTCGCAAATCCCCACCATTCCTGTGGACATGGCGCACAGGTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75880620 57 + 122082543 CCTCTGGTGTAGGCCTC--AG------------------------------AGAGGCCAGA-----------------------------------------GGTTTCTACTGCCTTTTTTTACACTT-TG-------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15706911 135 - 61074082 CCCATCAGGTGGGCCTCCAAAAAACCTAATGTGGACCTTTCTTGCTGGGGGGAAAGAGAGAGGTAGGAAGCACTGAAGCCAGTTGGCT--GTTTTCCTTGCTAATTCCCACCATC-CTGTATAAAATG-GGACATGTGg i canFam3.chr9 C 0 I 198 e panTro4.chr17 230606 1153 + 82630442 I a score=309912.000000 s hg38.chr17_GL383563v3_alt 253479 162 + 375691 AAACAAGTGTGGCCCT--CAGAGACGTGAGCTCTCCC------TTCTGCACTC--TACACACGCATCGGTT--GAGGGCAGCTCACCTTATAAACATGCAGAGTGCCC----TGCCCTGCATAGGCTGCTGAACGAGGCGATGCTGCGGGAA--CAGGAGGGAATCAA------ACACCCACAGCG s ponAbe2.chr17 117127 163 + 73212453 AAACGAGTGTGGCCCT--CAGAGACGTGAGCTCTCCC------TTCTGCACTCTTTACACACGCATCGGTT--GAAGGCAGCTCACCTTATAAACACCCAGAGTGCCC----TGCCCCGCGC-GGCTGCTGAACGAGATGATGGTGCGGGAA--CAGGAGGGAATCAA------ACACCCACAGCT i ponAbe2.chr17 C 0 I 27 s nomLeu3.chr19 235235 162 - 81552678 AAACGAGTGTGGCCCT--CAGAGACCTGAGCTCTCCC------TTCTGCACTCTTCACAC-CGCATTGGTT--GAAGGCAGCTCACCTTATAAACACACAGAGTGCCC----TGCCCCGTGCAGGCTGCTGAACGAGACGACGA-ATGGGAA--CAGGAGGGAATCAA------ACACCCACAGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 146950 167 + 80904711 AAACGAGTGTGGCCCT--CAGACACGTGAGCTCTCC-------CTCTGCACTCTTTACACATGCACAGGCT--GAGGGCCGCTCACCTTACAAACACCCAGAGTGCCCTGAGTGCCCTGCGCAGGCTGCTGAACGAGACGATGGTGCGGGAA--CAGGAGGGAATCAC------ACACCCACGGCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 153096 167 + 80997621 AAACGAGTGTGGCCCT--CAGACACATGAGCTCTCC-------CTCTGCACTCTTTACACATGCACAGGCT--GAGGGCCGCTCACCTTACAAACACCCAGAGTGCCCTGAGTGCCCTGCGCAGGCTGCTGAACGAGACGATGGTGCGGGAA--CAGGAGGGAATCAC------ACACCCACGGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 147592 167 + 74645514 AAACGAGTGTGGCCCT--CAGACACGTGAGCTCTCC-------CTCTGCACTCTTTACACATGCACAGGCT--GAGGGCCGCTCACCTTACAAACACCCAGAGTGCCCTGAGTGCCCTGCGCAGGCTGCTGAACGAGACGATGGTGCGGGAA--CAGGAGGGAATCAC------ACACCCACAGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 145127 170 + 75148670 AAACGAGTGTGGCCCT--CAGACACGTGAGctctccctctgcactctgcactctttacacatgcacAGGTG--GAGGGCCGCTCGCCTTACAAACACCCAGAGTGCCC----TGCCCTGCACAGGCTGCTGAACGAGACGATGGCGCGGGAA--CAGGAGGGAATCAC------ACACCCACGGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 951239 169 - 1291538 AAACCAGTGTGGCCC---CAGAGACGTGAGCTTTTCC------TTCTGCACCCTCCACACACATGTAGGTT--GAGGGCAGCTCACCTTATAAACACCCAGAGCGCTC----TGCCCCATGCAAGCTGCTGAGGGAGAGAAGGATGCCGGAA--CAGGAGGGAATCAATTCCCGCCCCCTCCGGCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75880677 88 + 122082543 -------------------------------------------CCCTGTA---------------------------------------------ACACAGAGCACTC----TGCCCTCCCAAGGCTGTTGAATGAGACCATGCTCTTGAAAATCAAGTGTGATAAAa------ataccagtggcc i mm10.chr11 C 0 I 2 s canFam3.chr9 15707244 141 - 61074082 AAGTAAGTGTGGTCCTCCCAGAGAAGCAAGATTTTCC------TACTG-------------TTTAGAGGGTAGGATGACAGCTCGCCCT-------CCCAGCATGCTC----TCCTCCTCCCAG---------TGAAATGAAGGTGCGAGGAATAACGAGAGAGTAGG------GGACCAGTTgct i canFam3.chr9 I 198 I 2 e panTro4.chr17 230606 1153 + 82630442 I a score=33180.000000 s hg38.chr17_GL383563v3_alt 253641 13 + 375691 CAGTTAGTGAGCA s nomLeu3.chr19 235397 13 - 81552678 CAGTTAATGAGCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 147117 13 + 80904711 CAGTTAGTGAGCA i rheMac3.chr16 C 0 I 67 s macFas5.chr16 153263 13 + 80997621 CAGTTAGTGAGCa i macFas5.chr16 C 0 I 36 s papAnu2.chr16 147759 13 + 74645514 CAGTTAGTGAGCA i papAnu2.chr16 C 0 I 36 s chlSab2.chr16 145297 13 + 75148670 CAGTTAGTGAGCa i chlSab2.chr16 C 0 I 128 s calJac3.chrUn_GL286409 951408 13 - 1291538 CATTTGGTGAACA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75880767 13 + 122082543 catttatggagca i mm10.chr11 I 2 C 0 s canFam3.chr9 15707387 13 - 61074082 catttattgagca i canFam3.chr9 I 2 C 0 e ponAbe2.chr17 117290 27 + 73212453 I e panTro4.chr17 230606 1153 + 82630442 I a score=2398.000000 s hg38.chr17_GL383563v3_alt 253654 15 + 375691 --GTTATCGG------ACCGGGC--------- s nomLeu3.chr19 235410 15 - 81552678 --ATTATCGG------ACCGGGC--------- i nomLeu3.chr19 C 0 I 16 s macFas5.chr16 153312 15 + 80997621 --ggtgtcag------accaggg--------- i macFas5.chr16 I 36 I 16 s papAnu2.chr16 147808 15 + 74645514 --GGTATCAG------ACCAGGG--------- i papAnu2.chr16 I 36 I 16 s calJac3.chrUn_GL286409 951421 15 - 1291538 --GTTATGTG------ACCAGGT--------- i calJac3.chrUn_GL286409 C 0 I 14 s mm10.chr11 75880780 16 + 122082543 --atcatgtg-----tgccaggt--------- i mm10.chr11 C 0 I 16 s canFam3.chr9 15707400 32 - 61074082 atggcatgtgccatgcactgggaccctgacga i canFam3.chr9 C 0 C 0 e chlSab2.chr16 145310 128 + 75148670 I e rheMac3.chr16 147130 67 + 80904711 I e ponAbe2.chr17 117290 27 + 73212453 I e panTro4.chr17 230606 1153 + 82630442 I a score=5900.000000 s hg38.chr17_GL383563v3_alt 253669 2 + 375691 CA s ponAbe2.chr17 117317 2 + 73212453 CA i ponAbe2.chr17 I 27 C 0 s nomLeu3.chr19 235441 2 - 81552678 CA i nomLeu3.chr19 I 16 C 0 s rheMac3.chr16 147197 2 + 80904711 CA i rheMac3.chr16 I 67 C 0 s macFas5.chr16 153343 2 + 80997621 CA i macFas5.chr16 I 16 C 0 s papAnu2.chr16 147839 2 + 74645514 CG i papAnu2.chr16 I 16 C 0 s calJac3.chrUn_GL286409 951450 2 - 1291538 CA i calJac3.chrUn_GL286409 I 14 I 2 s mm10.chr11 75880812 2 + 122082543 CA i mm10.chr11 I 16 C 0 s canFam3.chr9 15707432 2 - 61074082 ca i canFam3.chr9 C 0 C 0 e chlSab2.chr16 145310 128 + 75148670 I e panTro4.chr17 230606 1153 + 82630442 I a score=339563.000000 s hg38.chr17_GL383563v3_alt 253671 153 + 375691 GAGTATGAAGgag---gcaggtgtt---------atgatccccactatatagatgaaggaacaaaggctcagagatgactcgggctgcccgaggtcacacagctcgttcacggtaaagcagaat------------ttttgttcagacctC-----------------AGGAGGGTCGG-TCACACCCTCCCCTG s ponAbe2.chr17 117319 153 + 73212453 GAGTGTGAGGgag---gcaggtgtt---------acgatccccactatatagatgaagaaacaaaggctcagagatgattcgggctgcctgaggtcacacagctcgttagtggtaaagcaggat------------ttttgttcagacctc-----------------aggagagtcag-tcacaccctcccctg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 235443 151 - 81552678 GAGTATGAGGgag---gcaggtgtt---------atgatccccgctatgtagatgaagaaacaaaggctcagagatgattccggctgcccgaggt--cacagctcgttcgtggtaaagcaggat------------ttttgttcagacctC-----------------AGGAGAGTTGT-TCACACCCTCCCCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 147199 153 + 80904711 GAGTAAGAGGgag---gcgggtgtt---------ctgatccccactacacagatgaggaaacaaaggctcagggatggctccggctgcccgaggtcacacagctcgttgggggtaaagcgggat------------ctctgctcagatctC-----------------AGGAGAGCTGG-TCACACCCTCCCCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 153345 146 + 80997621 GAGtaagagggag---gcgggtgtt---------ctgatc-------cacagatgaggaaacaaaggctcagggatggctccggctgcccgaggtcacacagctcgttgggggtaaagcgggat------------ctctgctcagatctc-----------------aggagagctgg-tcACACCCTCCCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 147841 153 + 74645514 GAGTAAGAGGGAG---GCGGGTGTT---------CTGATCCCCActacacagatgaagaaacaaaggctCAGGGATGGCTCTGGCTGCCCGAGGTCACATGGCTCGTTGGGGGTAAAGCGGGAT------------CTCTGCTCAGATCTC-----------------AGGAGAGCTGG-TCACACCCTCCCCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 145438 153 + 75148670 GAGtaagagggag---gcgggcgtt---------ctgatccccactacacagatgaggaaacaaaagctcagggatggctccggctgcccgaggtcacacggctcgttgggggtaaagcgggat------------ctctgctcagatctc-----------------aggagagctgg-tcACACCCTCCCCTG i chlSab2.chr16 I 128 C 0 s calJac3.chrUn_GL286409 951454 151 - 1291538 GAGTGTGAAAGAg---gcgggtgtt---------atgatccccactatacagacaaagaaaccaaggctcagagacggctctggctacctga-gtcgcacagctcattagtggtaaagcagggc------------cttggtccagaccgc-----------------aggagactcgg-tcacaccctccctg- i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75880814 147 + 122082543 GTGTGTGGAGGAG---GTGGGTGATGTGTGTCACGTGATCTCTGTGA-AGACATGGAGTGATTGAGACTCCGAGATCCTGCAGACTGCT----------CAGCTTGAGAGCCACCAAATGGGGT------------CACCTTCCAGAGTTC-----------------AGAAGAAC-AA-TCGAGCCCTTTC--- i mm10.chr11 C 0 C 0 s canFam3.chr9 15707434 184 - 61074082 aagtatgaatgagggcggggatatc---------accatctccattataaagatgaggaaactgaggctcggaagtgttcgcgattgcccaagaaccc-cagcttgctgggggc-agtcaggatttaggaggctcccttcttccagatctcttccaccatttcttccaGGAAGAGTTGGATAACTCCCTCCCCTG i canFam3.chr9 C 0 C 0 e panTro4.chr17 230606 1153 + 82630442 I a score=558878.000000 s hg38.chr17_GL383563v3_alt 253824 186 + 375691 CCCTGGTGCCAGGCTGGTGCGCAC-GGCTCTCTAGAGAGC-TGCTTCTGCTCAGGCGGGTCCCTGGGGACGTGGCTGATGGCTCTCAAAACAATGGGCAGAGAAGGTGCCAGGGGCCGACCCTGGGACAAAGCTTTGCTGGGGTCGTGAGTGTGG-C---------C-------------------TGATGCTGACTCTAGGAGCAACGGCCCAGGC s panTro4.chr17 231759 188 + 82630442 CCCTGGTGCCAGGCTGGTGAGCACTAGCTCTCTAGAGAGGAGGCTAGTATTCAGGTGGGTCCCTGGGCACGTGGCTGATGGCTCTCAAAACAATGGGCAGAGAAGGTGCCAGGGGCCGACCCTGGGACAAAGCTTTGCTGGGGTCGTGAGTGTGG-C---------C-------------------TGATGCTGACTCTAGGAGCAACGGCCCAGGC i panTro4.chr17 I 1153 C 0 s ponAbe2.chr17 117472 186 + 73212453 cccTGGTGCCAGGCTGGTGCGCAC-GGCTCTCTAGAGAGC-TGCTTCTGCTCAGGTGGGTCCCTGGGGACATGGCTGATGGCTCTCAAAACAATGGGCAGAGAAGGTGCCAGGGGCCGACCCTGGGACAAAGCTTTGCTGGGGTCGTGGGTGTGG-C---------C-------------------TGATGCTGGCTCTAGGAGCAATGGCCCAGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 235594 186 - 81552678 CCCTAGTGCCAGGCCGGTGCGCAC-GGCTCTCTAGAGAAC-TGCTTCTGCTCAGGCGCGTCGCTGGGGACGTGGCTGATGGCTCTCAAAACAATGGGCAGAGAAGGTGCCAGGGGCCAACCCTGGGACAAAGCTTTGCTGGGGTCGTGGGTGTGG-C---------C-------------------TGATGCTGGCTCTAGGAGCAATGGCCCAGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 147352 182 + 80904711 CCCTGGTGCCAGGCTGGTGC-CA--GGCTCTCCAGAGAAC-TGC-TCTGCTCAGGCGGGTCCCCGGGGACGT-GCTGGTGGTTCTCAAAACAAGGGGCAGAGAAGGTGCCAGGGGCTGAGCCTGGGACGAAGCTTTGCTGGGACCATGGGTGTGG-C---------C-------------------TGATGCTGACTCCAGGAGCAACGGCCCAGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 153491 182 + 80997621 CCCTGGTGCCAGGCTGGTGC-CA--GGCTCTCCAGAGAAC-TGC-TCTGCTCAGGCGGGTCCCCGGGGACGT-GCTGGTGGTTCTCAAAACAAGGGGCAGAGAAGGTGCCAGGGGCTGAGCCTGGGACGAAGCTTTGCTGGGGCCATGGGTGTGG-C---------C-------------------TGATGCTGACTCCAGGAGCAACGGCCCAGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 147994 182 + 74645514 CCCTGGTGCCAGGCTGGTGC-CA--GGCTCTCCAGAGAAC-TGC-TCTGCTCAGGCGGGTCCCCGGGCACGT-GCTGGTGGTTCTCAAAACAAGGGGCAGAGAAGGTGCCAGGGGCTGAGCCTGGGACGAAGCTTTGCTGGGGCCGTGGGTGTGG-C---------C-------------------TGATGCTGGCTCCAGGAGCAGCGGCCCAGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 145591 183 + 75148670 CCCTGGTGCCAGGCTGGTGG-CA--GGATCTCCAGAGAAC-TGCTTCTGCTCAGGCGGGTCCCCGGGGACGT-GCTAGTGGTTCTCAAAACAAGGGGCAGAGAAGGTGCCAGGGGCTGAGCCTGGGACGAAGCTTTGCTGGGGCCGTGGGTGTGG-C---------C-------------------TGATGCTGACTCCAGGAGCAACAGCCCAGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 951605 186 - 1291538 cCATGGTGCCAGGCTGGTGCGCAC-GGCTCTCCAGAGAGC-TGCTTCTGCTCAGGCGGGTCCCTGGGGATGTGGCTGATGGCTCTCATAGGAATAGGCAGAGAAGGTGCT-GGGGCTGGCCACGGGACAAAGCTTTGCTGGGGTCGTGGGTGTGGCC---------C-------------------TGAACCTGACTCTAGGAGCATCGGCCCAGGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75880961 183 + 122082543 CCCAGGTGCCCCA-TGCTACCCAC-AG--CAACAGAGGGC-TGGTTCTGTTCCGGCAGGGACCTAGG-ACATGGCTGAAGGCTCT--AAGTAATTGGCCAGTGACATAGCACAGACTGATTCTAAGAGCAGGGTCCCCTGAGGATGGGGGTATAG-CTGGGACAAAC-------------------TTATACATGCTCC---AACACTGATTC---T i mm10.chr11 C 0 C 0 s canFam3.chr9 15707618 192 - 61074082 CCCAGGTGCCCAGCTGATGCCCAT-GGCTCTCCAGGGAGC-TGGTTC---------ATGTCCCTGGGAGTGGGGCTGATGCCTCTCG----AATAGGCAGAGAGGGCAACGCAGGATGACCCTGAGACAAGGCTTTGCTGGGGATGGGGGAGCAG-C---------CACACTGCTTACCAGCTGCATGACACAGGTTCTAGGAGCCAACACCTGGAC i canFam3.chr9 C 0 I 9 a score=1805310.000000 s hg38.chr17_GL383563v3_alt 254010 720 + 375691 TGGACAGTCTGGCCCTGC--CCTCCATGC--TCTCCCAGTGGGGAGGGGAGAGGTTTCCAGCT--GTCAGCAGGAGGCCCGGCAGCCTCTCCATTGCACCCCACAGGTGCCCTCGCAGCC---TGGCCTCTCCCCCGGGGG-CCGCCTTCCCCTATGCACACAGCCAAGGGGGAGAGGA-----CAGCCTCTG-CCCCAtcgtagtcagcttaggctgctgtaacaaaaataccatagactgagtggctg-----aaacaacagaagcatgtttatcacagctgcagaggcctga-------------------------------------------cggccccggtcggggtgcccacacggtcaggttctggggagggctcttcctggcgtacagacggcagcttcttgctgtaccctcccacagt---agagtgaggtctggcctcct---cc---tctgataaggacgccaatcccatccccagggtcccaccctcaggacctcatctga------tc-cctcccaaagcccccatctccaaatatcacatctgcgtgacggcttcaacgtaggtatttt-ggggtgatataaacattcagtccacagcaGCGCCC-GACCAGGACTGGGATCCTCTCTCTGCTTTTGTAC--TCGGGAGCCCTAGAAATGGGAGCATCGTCGTGTCTCTCAGCCCTGGAGTCGTCTAGAGCCCTCGGTCCCCCTGAGCCTGCACCTCACGCCATCCTGCGCT--ATCACCAG-ATCCTGTTCCTGAGACGTGACTCTCGGCTCCT----TCAGAG s panTro4.chr17 231947 724 + 82630442 TGGAGAGTCTGGCCCTGC--CCTCCATGC--TCTCCCAGTGGGGAGGGGAGAGGTTTCCAGCT--GTCAGCAGGAGGCCCAGCAGCCTCCCCATTGCACCCCACAGGTGCCCTCGCAGCC---TGGCCTCTCCCCTGGGGG-CCGCCTTCCCCTATGCACACAGCCTAGGGGGAGAGGA-----CAGCCTCTA-CCCCAtcatagtcagcttaggctgctgtaacaaaaacaccatagactgagtggctg-----aaacaacagaagcatgtttatcacagctgcagaggcctga-------------------------------------------tggccccagtcggggtgcccccacggtcaggttctggggagggctcttcctggcgtacagacggcagcttcttgctgtaccctcccacagt---agagtgaggtctggcctccttctcc---tctgatgaggacgccaatcccatccccggggtcccaccctcaggacctcatctga------tc-cctcccaaagcccccatctccaaatatcacatctgcgtgacggcttcaacgtaggtatttt-ggggtgatataaacattcagtccacagcaGCCCCCCGACCAGGACTGGGATCCTCTCTCTGCTTTTGTAC--TCGGGAGCCCTAGAAATGGGAGCATCGTCGTGTCTCTCAGCCCTGGAGTCGTCTAGAGCCCTCGGTCCCCCTGAGCCCGCACCTCACGCCATCCTGCGCT--ATCACCAG-ATCCTGTTCCTGAGACGTGGCTCTCAGCTCCT----TCAGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 117658 767 + 73212453 TGGGGAGTCTGGCCCTGT--CCTCTATGC--TCTCCCAGTGGGGAGGGGAGAGGTTTCCAGCTAGGTCAGCAGGAGGCCCAGCAGCCTCCCCATTGCACCCCACAGGTGCCCTCACAGCC---TGGCCTCTCCCCC-GGGG-TCACCCTCCCCTACGCACACAGCCAACGGGGAGGGGA-----CAGCCTCTG-CCCCAtcatagtcagctcaggctgctgtaacaaaaataccatagactgagtggctg-----aaacaacagaagcgtgtttatcactgctgcagaggcctgacggccgatcatggtccgtctttatcacagctgcagaggcccgccggccccggtcggggtgccgacacggtcaggttctggtgagggctcttcctggagtgcagacggcagcttcttgctgtttcctcccacagt---agagtgaggtctggcctcctcctcc---tctgataaggacgccgatcccatcacgggggccccaccctcaggacctcgtctaa------tc-cctcccaaagtccccatctccaaatatcacatctgggtaac-gcttcaatgtaggtattttgggggtgacataaacattcagtccacagcaGCCCCC-GACCAGGACTGGGATCTTCTCTCTGCTCTTGTAC--TCGGGAGCCCTAGAAATGGGGGTGTCACCGTCTCTCTCAGCCCTGGAGTCGTCTAGAGCCCTCAGTCCCCCTGAGCCTGCACCTCACGCCATCCTGCGCT--ATCACCAA-GTCCTGTTCCTGAAACATGGCTCTCAGCTCCT----TCAGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 235780 729 - 81552678 TGGGGAGTCTGGCCCTGC--CCTCCATGC--CCTCCCAGTGGGGAAGGGAGAGGTTTCCAGCT--GTCAGCGGGAGGCGCAGCAGCCTCCCCATTGCACCCCATAGGTGCCCTCACAGCC---TGGCCTCTCCCCCGGGGGCCCACCCTCCCCTATGCATACAGCCAAGGGGGAGGGGA-----CGGCCTCTG-CCCCAtcgtagtcagctcaggctgctgtcacaaaaacaccatagactgagtggctgacacaacacaacagacgtgtgttaatcacagctgcagaggcctga-------------------------------------------cggccccggtcggggtgccgacacggtcaggttccggggagggctcttcctggcgcacagacggcagcttcttgctgtatcctgccacagt---ag-gtgaggtctggcctcctcctcc---tctgataaggacgccaatcccagcacgggggtcccaccctcaggaccccatctaa------tcacctcccaaagtccccatctccaaacatcacatctgggtaacggcttcaacgtgggtatttt-ggggcgatataaacattcagtccacagcaGCCCCC-GACCAGGACTGGGACCCTCTCTCTGCTCTTGTAC--TCGGGAGCCCTAGGAATGGGAGCATCATCGTCTCTCTCAGCCCTGGAGTCGTCTAGAGCCCTCGGTCCTCCTGTGCCTGCACCTCATGCCATCCTGCGGT--GTCACCAA-TTCCTGTTCCTGAAACGTGGCTGTCAGCTCCT----TCAGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 147534 701 + 80904711 TGGGGAGTCTGGCCCTGC--CCTCCGTGCTGTCTCCCAGTGTG-GGGGGAGAGGTTTCCAGCT--GTCAGCAGGAAGCCCCGCGGCCTC-CCATTGCACCCCACAGGCGCCCTCACAGCC---GGGCCTCT---------G---------CCCTATGCACACAGCCAAGGGGGAGGGGA-----CAGCCTCTG-CCCCCtctcagtcagttcacgctgctgtgac--agacaccacagactgagtggctg-----aaacaacagaagcgtgtgtgtcacatccgcagaggcccaa-------------------------------------------c-gccccggtt--ggtgctggcacggt-aggttctggggggggcgcttcctggcgtacgcatggcagcttcttgctgtgccctcccatggt-ggagactgaggtctggcctcctcctcc---tccgataaggacgccagtcccatcac-agggacccaccctcaggacctcctctac------tcacctcccaaagtccccatctccaaataccacgtcaga-caagggcttcaacgtaggtatctt-ggggggatacaaacattcagtccacagcaGCCCCC-GACCAGGACTGGGATCCTCTCTCTGCTTTCGTAC--TCGGGAGCCCCAGAAACGGGAGCATCATCGTCTCCCCCAGCCCCGGAGCCGTCTCGAGCCCTCCGAACTCCTGAGTCTGCACCTCACGCCGTCCTGCACT--AGAACCAA-GTCCGGTTCCTGAAACGTGGCTCTCAGCTCCT----TCCGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 153673 702 + 80997621 TGGGGAGTCTGGCCCTGC--CCTCCGTGCTGTCTCCCAGTGTG-GGGGGAGAGGTTTCCAGCT--GTCAGCAGGAAGCCCCGCGGCCTC-CCATTGCACCCCACAGGCGCCCTCACAGCC---GGGCCTCT---------G---------CCCTATGCACACAGCCAAGGGGGAGGGGA-----CAGCCTCTG-CCCCCtctcagtcagttcacgctgctgtaac--agacaccacagactgagtggctg-----aaacaacagaagcgtgtgtgtcacatctgcagaggcccga-------------------------------------------c-gccccggtt--ggtgctggcacggt-aggttctggggggggcgcttcctggcgtacgcatggcagcttcttgctgtgccctcccatggt-ggagactgaggtctggcctcctcctcc---tccgataaggacgccagtcccatcac-agggacccaccctcaggacctcctctac------tcacctcccaaagtccccatctccaaataccacgtcagagcaagggcttcaacgtaggtatctt-ggggggatacaaacattcagtccacagcaGCCCCC-GACCAGGACTGGGATCCTCTCTCTGCTTTTGTAC--TCGGGAGCCCCAGAAACGGGAGCATCATCGTCTCTCCCAGCCCCGGAGCCGTCTCGAGCCCTCCGAACTCCTGAGTCTGCACCTCACGCCGTCCTGCACT--AGAACCAA-ATCCGGTTCCTGAAACGTGGCTCTCAGCTCCT----TCCGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 148176 702 + 74645514 TGGGGAGTCTGGCCCTGC--CCTCCGTGCTGTCTCCCAGTGTG-GGGGGAGAGGTTTCCAGCT--GTCAGCAGGAAGCCCCGCGGCCTG-CCATTGCACCCCACAGGCGCCCTCACAGCC---GGGCCTCT---------G---------CCCTATGCACACAGCCAAGGGGGAGGGGA-----CAGCCTCTG-CCCCCTCTCAGTCAGTTCACGCTGCTGTCAC--AAacaccacagactgagtggctg-----aaacaacagaagCGTGTGTGTCACATCTGCAGAGGCCTGA-------------------------------------------C-GCCCCGGTT--GGTGCCGGCACGGT-AGGTTCTggggggggCGCTTCCTGGCGTGCGCATGGCAGCTTCTTGCTGTGCCCTCCCAGGGT-GGAGAGTGAGGtctggcctcctcctcc---tccgatAAGGACGCCAGTCCCATCAC-AGGGACCCACCCTCAGGACCTCCTCtac------tcacctcccaaagtccccatctccaaataccacgTCAGAGCAAGGGCTTCAACGTAGGTATCTT-GGGGtgatacaaacattcagtccacagcTGCCCCC-AACCAGGACTGGGATCCTCTCTCTGCTTTTGTAC--TCGGGAGCCCCAGAAACGGGAGCATCATCGTCTCTCCCAGCCCCGGAGCCATCTCGAGCCGTCCGAACTCCTGAGTCTGCACCTCACGCCGTCCTGCACT--AGAACCAA-GTCCGGTTCCTGAAACGTGGCTCTCAGCTCCT----TCCGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 145774 702 + 75148670 TGGGGAGTCTGGCCCTGC--CCTCCGTGCTGTCTCCCAGTGGGTGGGGGAGAGGTTTCCAGCT--GTCAGCATGAAGCCCCACGGCCTC-CCACTGCACCCCACAGGCGCCCTCACAGCC---GGGCCTCT---------G---------CCCTATGCACACAGCCAAGGGGGAGCGGA-----CAGCCTCTG-CCCCAtctcagtcagttcaggctgctgtaac--aaacaccacagactgactggctg-----aaacaacagaagcgtgtgtgtcacatccgcagaggcctga-------------------------------------------c-gccccggtt--ggtgctggcacggt-aggttctggggagggctcttcctggcgtacgcatggcagcttcttgctgtgccctcccatggt-ggagagtgaggtctggcctcctcctcc---tccgataaggacaccagtcccatcac-agggacccaccctcaggacctcctctac------tcacctcccaaagtccccatctccaaataccacgtcagagcaagggcttcaacgtaggtatctt-ggggtgatacaaacattcagtccacagcaGCCCCC-GACCAGGACTGGGATCCTCTCTCTGCTTTTGTAC--TCGGGAGCCCCAGAAACGGGAGCATCATCGTCTCTCCCAGCCCTGGAGCC-TCTCGAGCCCTCCGTTCTCCTAAGTCTGCACCTCACGCCGTCCTGCACT--AGAACCAA-GTCTGGTTCCTGAAACGTGGCTCTCAGCTCCT----TCCGAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 951791 684 - 1291538 TGGGGAGTCTGGCCCGGCAGCCCCCGTGCTGTCTCCCAGGAGGGAGGAGAGAGGTGTTCAGCT--GTGAGCAGGAAGCCCAGCAGCCTC----------------------CCCACAGCC---TGGCCTCT--CCCTGGGG-CTGCCCTCCCTTACAGACACAGCCAAGGGGGAGGGGA-----CAGCCTCTG--CCCAtc----ttagctcaggttgctgtgacaaaaatgccatagac-aagtggctg-----aaaccacaca-gcttgtttatcatagctacagaggcctga-------------------------------------------aggccctggtg-----------------gggttctggggagggctcttcctggtgtgcagatggcagcttcttgctgtatcctcccacggt---agagtgaggcctggccgccacctccttgtcctataaggatgccaatcccatcacaaggcttccatcgctaggacctcatctaa------ttgcctcccaacatccccacctccaaatatcacatcggggtaagggcttcaacattgggatttttggggcgatataaacattcagtccacagcCGCCCCC-AGGCAGGACTGGGACCCTCTCTCTGCTTTTGTGC--TCGGGAGCCCAAGAAGTGGGGGC-TCATCATCTCTCTCGGCCCTGGAGTCGTCTGGAGCCCTCGGTCCTCCCTAGCCTGCACCTCACACCATCCTGCTCT--GTCACTGACTTCCTGTTCCTGAAACATTGCTCTCAGCTCAT----CCAGAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75881144 581 + 122082543 TGGCCAGTCTGGTTCTGT--CCTGAGTTC--TCTCTCA--------------------------------------GCCTAGCAGCCTC-CACTAGCACCCTGCAAACCACCCAGCAGCCCAATGGTCACT---------G---------TC------------CCTAGGGGGAGGGGACAGTGCAGCATCAGGCCCTATCTAGGTTGGATCAGTTTGATATGATGAAAAGACCATAG--TTCTTGATTG-----AAGCTACAGAAGC-TGTTTTCCATAGTGCTGGAGGCCTGA-------------------------------------------A---------------------------AGGCCA----------------------ACGgatggcagccttctagaatattcccatgtgacagatgacagagctctggccacttcctct---tcttatgacgtttccggtcccattgt-atgggcccaaccctgtgactgcttctaactcaagtcactttccaaagaccatacctccaagtatcctat-tgggtgtgggcatcagaatataggttta-ggg--gacacaaatatttggtccatagTGGCTTCC-CACCA----TGGG--TCTCTCTCTGCTGTTGCATGGTGAGGACCCTTGGAATT-----------------------TCTGGGAGTCATCTA----------------TGTGC---CATCCTATACCACCCAGCACTCAGCCACCAACTTGATGTCCATATAACCCTGACCCTGTTTCCTGCTGTCAGTG i mm10.chr11 C 0 C 0 e canFam3.chr9 15707810 9 - 61074082 I a score=591686.000000 s hg38.chr17_GL383563v3_alt 254730 301 + 375691 GCCGCACGGCACGGCGCACAGGTTT-GGGGATGGCAGACCTGGgtgggctcccgggcaagtcacccaaagcctctctaaacctcagacgttctcagctgtaaagtgggataatacttacacccttgggttgttttgaggatcaac-tgaga--cacaggaaaagcaaccagcacgtaatagcgactcgataaatgccagctGCGG-----TTA---GTGCAGCCCCTCGTACCGTGTTCTGCAGCCCGGCGTGGTTTTCCTCTAGTCCCACACGAtctaatacggtagccaccagctgcaggtggctatttaa s panTro4.chr17 232671 302 + 82630442 GCCGCACGGCACGGCCCACAGGTTTAGGGGGCGGCAGACCTGGgtgggctcccgggcaagccacccaaagcctctctaaacctcagacgttctcagctgtaaagtgggataatacttacacccttgggttgttttgaggatcaac-tgaga--cacgggaaaagcaaccagcacgtaatagcgactcaataaatgccagctGCGG-----TTA---CTGCAGCCCCTCGTACCATGTTCTACGACCCGGTGTGGTTTTCCTCTAGTCctgcacgatctaatacggtagccaccagctgcaggtggctatttaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 118425 305 + 73212453 GCCGCACGGCACGGCGCACAGGTTTAGAGGGCGGCAGACCTGGgtgggctctcgggcaagctacccaaagcctctctaaacctcagacgttctcatctgtaaagtgggataatacttacacccttgggttgttttgaggatcaac-tgaga--cacacgaaaagcaaccagcacgtaatagcaactcgataaatgccagctgcgg--ttattA---GTGCAGCCCCTCGCGCCGTGTTCTACAGCCTGGCGTGATTTTCCTCTAGTCccgcactatctaatacattagccacctgctgcaggtggctatttaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 236509 304 - 81552678 GCCGCACGGCACAATGCACAGGTTTAGGGGGCGGCAGACGTGGgtgggctctcgggcaagctaccc-aagcctctctaaacctcagacgttctcatctgtaaagtgggatcatacttacacccttgggttgttttgaggatcaac-tgaga--cacacgaaaagcaaccagcacgtaatagcaactcgataaatgccaggcacgc--ttattA---GTGCAGCCCCTCGCACCTCGTTCTGCAGCCTGGCGTGATTTTCCTCTAGTCCCCcaccatctaatacattagccaccagctgcaggtggctatttaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 148235 280 + 80904711 GCCGCACGGCACCGTGCACAGGTTTAGGGGGCGGCAGACCTGGgtgggccccggggcaagctacccaaagcctctctaaacctcagacgttctcgtctgcgaagtgggataacacttacacccttgagttgctttgaggatca-----------------------------acgtaagaGCCGCTCGATGAAC-GCAGCTGCGG--TTATCACGAGTGCAG-CCCTCGCACCGTGTTCTGCAGCCCGGCACGATTTTCCTCTAGTCccgcacgatcgaacacgctagccgccagctgccggtggctatttaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 154375 280 + 80997621 GCCGCACGGCACCGTGCACAGGTTTAGGGGGCGGCAGACCTGGgtgggccccggggcaagctacccaaagcctctctaaacctcagacgttctcgtctgcgaagtgggataacacttacacccttgagttgctttgaggatca-----------------------------acgtaagaGCCGCTCGATGAAC-GCAGCTGCGG--TTATCACGAGTGCAG-CCCTCGCACCGTGTTCTGCAGCCTGGCACGATTTTCCTCTAGTCccgcacgatcgaacacgctagccgccagctgccggtggctatttaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 148878 280 + 74645514 GCCGCACGGCACCGTGCACAGGTTTAGGGGGCGGCAGACCTGGGTGGGCCCCGGGGCAAGCTA-CCAAAGCCTGTCTAAACCTCAGAcgttctcatctgtgaagtggggaaaCACTTACACCCTTGAGTTGTTCTGAGGATCA-----------------------------ACATAAGAGCCACTCGATGAACGGCAGCTGCGG--TTATCACAAGTGCAG-CCCTCGCACCGCCTTCTGCGGCCTGGCACGACTTTCCTCCAGTCCCGCACCATCGAACACGCTAGCCGCCAGCTGCCGGTGGCTATTTAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 146476 280 + 75148670 GCCGCACGGCACCGTGCACAGGTTTAGGGGGCGGCAGACctgggtgagccccggggcaagcta-ccaaaacctctctaaacctcagatgttctcgtctgtgaagtgggataacacttacacccttgagttgttttgaggatca-----------------------------acgcaagagccactcgatgaacagcAGCCGTGG--TTATCACGCGTGCAG-CCCTCGCACCGCGTTCTCCAGCCTGGCACGATTTTCCTCTAGTCCCACACGAtcaaatacgttggccgccagctgccggtggctatttaa i chlSab2.chr16 C 0 C 0 s mm10.chr11 75881725 294 + 122082543 -ATGCTCGG------ACATAGGCTTTGATTGGGGCAAATTGGGGTAAGCCCTTGGATGGGGCTACCCGATCTGGTCCAAACCTCAGATGTTCTTATGTCTAAGATGAGTTCAC-CATCCATCCT--------TTTGAAGATTAACTTGAGATTCACATGAAAAGCAAGCAGTATATAAAAGGCACTCAGCCGACGCCCAGCACTGTTTTATTA---GCGGCACCTGTTGCATCCTGCTCTAAAAGCCTATGAGAGTCTCCTCAAGCTCTGCATCATTTGGTGTAGTATCTAGCAGTCATGGATGATAATTTAA i mm10.chr11 C 0 I 1002 e canFam3.chr9 15707810 9 - 61074082 I e calJac3.chrUn_GL286409 952475 0 - 1291538 C a score=967386.000000 s hg38.chr17_GL383563v3_alt 255031 464 + 375691 gtgcaaactgattgtgatggaataaaatgaaaaacagctctgaggtcacactgaccccatttcaggtactccgtggcctcacgtggccggtggctaccgcaagggacagcagagaaatacattttcatcctcaccgtgaggttctgcaggacggcgctCGGCCAGAGGACCCTGCCCTCAGTCTCCCCACTCAACCTGCCAACAGCCTGCTCCCC-TGCTCCCCTACAGCTTCCAATCAACCCGACTGATGCACTCATGTGCCTGCCCCTCAGCGCGGCTCTATCTCCACCCCCATCCCGTCTAGCGCTCACCTCCCCTGCGATTCACTAATCCACGTTACCATCACCCGCTGAGCACCCGTGAGGGGCACAGGCCTGGCGTGACAGGACACGGATGAACAGGGTGGGGCCCAGGCCCCACTGTGCACCCCGGGATGCCCTCAACACTTGCTCCGATGTCCCCCC s panTro4.chr17 232973 464 + 82630442 gtgcaaactgattgtgatggaataaaatgaaaaacagctctgaggtcacactgaccccatttcaggtactccgtggcctcacgtggccggtggctaccgcatgggacagcagagaaatacattttcatcctcgc-gtgagggtctgcaggacggcgctgGGCCAGAGGACCCTGCCCTCAGTCTCCCCACTCAACCTGCCAACAGCCTGCTCCCCCTGCTCCCCTACAGCTTCCAATCAACCCGACTGATGCACTCATGTGCCTGCCCCTCAGCGTGGCTCTATCTCCACCCCTACCCCGTCTAGCGCTCACCTCCCCTGCAATTTACTAATCCACGTTACCATCACCCGCTGAGCACCCGTGAGGGGCACAGGCCTGGCGTGACGGGACACGGATGAACAGGGTGGGGCCCAGGCCCCACTGTGCACCCCGGGATGCCCTCAACACTTGCTCTGATGTCCCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 118730 464 + 73212453 gtgcaaactgattgtgattaaataaaatgaaaaacagctctgaggtcacactaaccccatttcaggcactccgttgcctcacgtggccggtggctactgcatgggacatcagagaaatacattttcatcctcactgtgaggttctgcaggatggcgctgGGCCAGAGAACCCTGCTCTCAGTCTCCCCACTCAACCTGCCAACAGCCTGCTCGCCCTGCTGCCCCACAGCTTCCAATCAATCCGACTAATGCACTCATGTGCCTGCCCCTCAGCGTGGCTCTATCTCCACCCCTACCCCGTCTAGCACTCACCTCCCCTCCGATTTACTAATCCACGTTACCATCACCTGCTGAGCAGCCGTGAGGGGCACAGGCCTGGCTTGACAGGACACGGATGAACAGGGT-GGGCCCAGGCCCCACCGTGCACCCGGGGATGCCCTAAACACTTGCTCCGATGTCCCCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 236813 464 - 81552678 gtgcaaactgattatgattaaataaaatgaaaaacagctctgaggtcacactggccccatttcaggcactccgttgcctcacgtggccggtggctactgcatgggacaacagagaaatacattttcatcctcaccgagaggttctgcaggacggcgctgGGCCAGAGGACCCTGCCCTCAGTCTTCCCACTCAACCTGCCAACAGCCTGCTCCCC-TGCTCCCCTACAGCTTCCAATCAATCCGACTAATGCACTCATGTGCCTGCCCCTCAGCGTGGCTCTATCTCCACCCCCACCCCGTCTCGCGCTCACCTCCCCTCCAATTTATTAATCCACGTTACCATCACCTGCTGAGCAGCCGTGAGGGGCACAGGCCTGGCTTGACAGGACACGGATGAACAGGGTGGGGCCCAGGCCCCACTGTGCACCCGGGGGTGCCCTAAACACTTGCTCCGATGTCCCCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 148515 435 + 80904711 atgcaaactgattacaattaaataaaatgaaaaagagcgctgaggccacactgaccccattgcaggtactccgttgcctcacgtggccggcagctactgcgtgggacaggacagaaatacattttcatcctcaccatgaggttctgcaggacagcgctgGGCTG--AGACCCTGCCCTCAGTCTCGCCACTCAACCTGCCACCAGCCTGCTCTCCCTGCCCCCCTACAGCTTCCAATCA----GACTAATGCACTCATGTG-TTGCCCGTCAGCATGGCTCTGTCTCCACCCCCACCCCATCTAGCGCTCACCGCCATTCCGATCCACTGATCCACGTTACCATCACCTGCTGAGCACCCGTGAGGGGCACAGGCCTGGCTTGACA-GACACGGACAAACAGGGTGGGGGCCAG----------------------GCCCTAAACGCTTGCTCCAATGTCCCCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 154655 437 + 80997621 atgcaaactgattacaattaaataaaatgaaaaacagcgctgaggccacactgaccccattgcaggtactccgttgcctcacgtggccggcggctactgcgtgggacaggacagaaatacattttcatcctcaccatgaggttctgcaggacagcgctgGGCCGGAGGACCCTGCCCTCAGTCTCGCCACTCAACCTGCCACCAGCCTGCTCCCCCTGCCCCCCTACAGCTTCCAATCA----GACTAATGCACTCATGTG-TTGCCCGTCAGCATGGCTCTGTCTCCACCCCCACCCCATCTAGCGCTCACCGCCATTCCGATCCACTGATCCACGTTACCATCACCTGCTGAGCACCCGTGAGGGGCACAGGCCTGGCTTGACA-GACACGGACAAACAGGGTGGGGGCCAG----------------------GCCCTAAACGCTTGCTCCAATGTCCCCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 149158 436 + 74645514 ATGCAAACtgattacaattaaataaaatgaaaaacagcacTGAGGCCACACTGACCCCATTGCAGGTACTCCGTTGCCTCACGTGGCTGGCGGCTACTGCGTGGGACAGGACAGAAATACATTTTCATCCTCACCGTGAGGTTCTGCAGGACAGCGCTGGGCCGGAGGACCCTGCCCTCAGACTCGCCACTCAACCTGCCACCAGCCTGCTccccc-gccccccTACAGCTTCCAATCA----GACTAATGCGCTCATGTG-CTGCCCGTCAGCATGGCTCtgtctccacccccaccccatctagCGCTCACCGCC-CCCCGATCCACTGATCCACGTTACCATCACCTGCTGAGCACCCGTGAGGGGCACAGGCCTGGCTTGACAGGACACGGACGAACAGGGTGGGGCCCAG----------------------GCCCTAAACGCTTGCTCCGATGTCCCCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 146756 427 + 75148670 atgcaaactgattacaattaaataacatgaaaaacagcactgaggccacactgaccccatcgcaggtactccgttgcctcacgtggccggcggctattgcgtgggataggacagaaatacattttcatcctcaccatgaggttctgcaggacggcgctgGGCCGGAGGACCCTGCCCTCAGACTCGCCACTCAACCTGCCACCAGCCTGCTCCCCCTGCCCCCCTACAGCTTCCAATCA----GACTAATGC-----------TGCCCGTCAGCGTGGCTCTGTCTCCACCCCCACCCCATCTAGCACTCACCGCC-CCCCGATCCACTGATCCACGTTACCATCACCTGCTGAGCACCCGTGAGGGGCACAGGCCTGGCTTGACGGGACACGGATGAACAGGGTGGTGCCCAG----------------------GCCCTAAACGCTTGCTCCGACGTCCCCCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75882019 1002 + 122082543 I e canFam3.chr9 15707810 9 - 61074082 I e calJac3.chrUn_GL286409 952475 0 - 1291538 C a score=60884.000000 s hg38.chr17_GL383563v3_alt 255495 25 + 375691 GCCACTGCTGGGGGGGTGCTCGGCT s panTro4.chr17 233437 25 + 82630442 GCCACTGCTGGGGGGGTGCTCGGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 119194 24 + 73212453 GCCACTGCTGGGGGGA-GCTCGGCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 237277 24 - 81552678 GCCGCTGTTGGGGGGA-GCTCGGCT i nomLeu3.chr19 C 0 M 3029 s rheMac3.chr16 148950 24 + 80904711 GCCACTGCCGCGGGGA-GCTCGGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155092 24 + 80997621 GCCACTGCCGCGGGGA-GCTCGGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 149594 24 + 74645514 GCCGCTGCCGGGGGGA-GCTCGGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147183 24 + 75148670 GCCGCTGCCGGGGGGA-GCTCGGCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 952475 23 - 1291538 GCCCCTGCTGGGGGT--GCTCAGCT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75882019 1002 + 122082543 I e canFam3.chr9 15707810 9 - 61074082 I a score=18571.000000 s hg38.chr17_GL383563v3_alt 255520 9 + 375691 GCCCTGTGG s panTro4.chr17 233462 9 + 82630442 GCCCTGTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 119218 8 + 73212453 GCCCTAT-G i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 148974 9 + 80904711 GCCCTGTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155116 9 + 80997621 GCCCTGTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 149618 9 + 74645514 GCCCTGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147207 9 + 75148670 GCCCTGTGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 952498 9 - 1291538 GCCCAGTGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75882019 1002 + 122082543 I e canFam3.chr9 15707810 9 - 61074082 I e nomLeu3.chr19 237301 3029 - 81552678 M a score=674474.000000 s hg38.chr17_GL383563v3_alt 255529 353 + 375691 GGGGGTTTGAGGGACAAATG-----TGCACG-------------TGTCTCACTGATGAAACA---GTGCCGTGG-GGGCAGGGAGAGAAGCCAGGAGAGTGTCCACGG-AACTGAGTCCTGTCCTCTACTCACAGACCACGAGGAC----------------------------------------------------------------GCGGAGCCAACGGATCTGGGGACAGGAGCAGCGTGGACCAGTCGCCCTCCAGAGGTTGGGTGAAGGGCTGTCCCTGCT--------------GGGCCCACGAACC-------TCTGCCTTCCCCTTAGGGTCTGGTGCTTCCTGCTCCCCAG------------------------------------------------------ATCGCGCCTCG-GGC---AGCCTGTTT-----------------------------------------------TCCC--------------------------GCTACCAACCAACGCTGGCGGCACCTGGGGTCAGTTCT--CCAC--CTCAGCCATCCCCCTGCTGCTTCAGTGTCT s panTro4.chr17 233471 353 + 82630442 GGGGGTTTGAGGGACAAATG-----CGCACG-------------TGTCTCACTGATGAAACA---GTGCCGTGG-GGGCAGGGAGAGAAGCCAGGAGAGTGTCCACGG-AACTGAGTCCTGTCCTCTACTCACAGACCACGAGGAC----------------------------------------------------------------ACGGAGCCAACGGATCTGGGGACAGGAGCAGCGTGGACCAGTCGCCCTCCAGAGGTTGGGTGAAGGGCTGTCCCTGCT--------------GGGCCCACGAACC-------TCTGCCTTCCCCTTAGGGTCTGGTGCTTCCTGCTCCCCAG------------------------------------------------------ATCGCGCCTCG-GGC---AGCCTGTTT-----------------------------------------------TCCC--------------------------GCTACCAACCAACGCTGGCGGCACCAGGGGTCAGTTCT--CCAC--CTCAGCCATCCCCCTGCTGCTTCAGTGTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 119226 403 + 73212453 GGGGGTTTGAGGGACAAATG-----TGCACG-------------TGTCTCACTGATGAAACA---GTGCTGTGG-GGGCAGAGAGCGAAACCAGGAGAGCGTCCACGG-AACTGAGTCCCGTCCTCTACTCACGGACCACGAGGAC----------------------------------------------------------------GCGGAGCCAACGGATCTGGGGACAGGAGCAGCGTGGACCAGTCGCCCTCCAGAGGTTGGGTGAAGGGCTGTCCCTGCT--------------GGGCCCAGGAACC-------TCTGCCTTCCCCATGGGGTCTGGTGCTGCCTGCTCCCCAGGCCCCAACAGGAGCTT--GTGGTTGGGCAGGTGG----AGAGAACAACAGTCCCATCCCGCCTTG-GGC---AGCCTGTTT-----------------------------------------------TCCC--------------------------GCCACCAACCATCACTGGTGGCACCTACGGTCAGTTCT--CCACCTCTCAGTCATCCCCATGTTGCTTCAGTGTCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 148983 387 + 80904711 GGGGTTTTGAGGGACAAGTG-----TACACG-------------TGTCTCACTGATGAAACAG-GGTGCTGTGGGGGGCAGGGAGAGAAAGCAGGAGGGTGTCCAAGG-AACTGAGTCCTAT-CTCTACTCACAGACCACGAGGAC----------------------------------------------------------------ACGGAGCCAGCGGATCTGGGGACAGGAGCAGCGTGGACCCGTCGGCCTCCAGAGGTTCGGTGAA----------------------------GGGCCCAGGCACC-------TCCGCCTTCCCCGTAGGGTCTGGTGCTGCCGGCTCCCCGGGCCCCAACAGGAGCTT--GTGGTTGGCCAGGTGG----AGAGAACAATCCC---GTCCCACCTCG-GGC---AGCCTG-TT-----------------------------------------------TCCC--------------------------ACTACCAACCATTGCTGGCGGCACCTACAGTCAGTTCT--CCACGTCTCAGTCATCCCCAGCTTCCTTCAGTGTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155125 387 + 80997621 GGGGTTTTGAGGGACAAGTG-----TACACG-------------TGTCTCACTGATGAAACAG-GGTGCTGTGGGGGGCAGGGAGAGAAAGCAGGAGGGTGTCCAAGG-AACTGAGTCCTAT-CTCTACTCACAGACCACGAGGAC----------------------------------------------------------------ACGGAGCCAGCGGATCTGGGGACAGGAGCAGCGTGGACCCGTCGGCCTCCAGAGGTTCGGTGAA----------------------------GGGCCCAGGCACC-------TCCGCCTTCCCCGTAGGGTCTGGTGCTGCCGGCTCCCCGGGCCCCAACAGGAGCTT--GTGGTTGGCCAGGTGG----AGAGAACAATCCC---GTCCCACCTCG-GGC---AGCCTG-TT-----------------------------------------------TCCC--------------------------GCTACCAACCATCGCTGGCGGCACCTACAGTCAGTTCT--CCACGTCTCAGTCATCCCCAGCTTCCTTCAGTGTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 149627 384 + 74645514 GGGGTTTTGAGGGTCAAGTG-----TACACG-------------TGTCTCACTGATGAAACAG-GGTGCTGTGGAGGGCAGG--GAGAAAGCAGGAGGGTGTCCACGG-GACTGAGTCCTGT-CTCTACTCATAGACCACGAGGAC----------------------------------------------------------------GCGGAGCCAGCAGATCTGGGGACAGGAGCAGCGTGGGCCAGTCGGCCTCCAGAGGTTCGGTGAA----------------------------GGGCCCAGGAACC-------TCCACCTTCCCCGTAGGGTCTGGTGCTGCCCGCTCCCCGGGCCCCAACGGGAGCTT--GTGGTTGGCCAGGTGG----AGAGGACAATCCC---GTCTCACCTCG-GGC---AGCCTG-TT-----------------------------------------------TCCC--------------------------GCTACCAACCAACGCTGGCGGCACCTACGGTCAGTTCT--CCACGTCTCAGTCAT-CCCAGCTTCCTTCAGTGTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147216 388 + 75148670 GGGGTTTTGAGGGACAAGTG-----TACACG-------------TGTCTCACTGATGAAACAG-GGTGCTGTGGGGGGCAGGGAGAGAAAGCAGGAGGGTGTCCACGG-AACTGAGTCCTGT-CTCTACTCACAGACCACGAGGAC----------------------------------------------------------------GTGGAGCCAGCGGATCTGGGGACAGGAGCAGCGTGGACCAGTCGGCCTCCAGAGGTTAAGTGAA----------------------------GGGCCCAGGAACC-------TCCACCTTCCCCGTAGGGTCTGGTGCTGCCGGCTCCCCGGGCCCCAACGGGAGCTT--GTGGTTGGCCAGGTGG----AGAGAACAATCCC---ATCCCACCTCG-GGC---AGCCTGTTT-----------------------------------------------TCCC--------------------------GCTAACAACCATCACTGGTGGCACCTACGGTCAGTTCT--CCACGTCTCAGTCATCCCCAGCTTCCTTCAGTGTCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 952507 558 - 1291538 GAGGTTTTGAAGGACGTGTG-----GGCACACGCCCATGGGCACTGTCTCACTGATAAAACCA-TGTGCTGCTGGGGGCCAGGAGAGAAACCAGAAGAGTGTCCATGG-AACTGAGTCCTGTCCTCTGCTCACAGGCCACGAGGGCAGGGAGACAAACCAGGAGGGTATCCATGGAACCCAGCCGTGTCCCCTGCTCATGGACCATGAAAACAGAGCCCACCAATCT-GGGACAGGAGCAGAAGGGACTGGTCACCCTCCAGAGGTCAGGTCGAGGCCTGTCCCCACT--------------GAGCTTAGGAACC-------TCCGCCTTCACCACAGGGTCCAGTGCTGCCTGTTCCCCAGACTCCAGCAAGAGCTC--GTGGCTGGCCAGGTGG----AGAGAAAAATGCTCCCACCCTACCTTGCGAC---CACCTGTTTCAGGCTACCAGCCATCACTGGTGGGTGGNNNNNNNNNNAAAATATGCTCCCCCCCTACCTTGGGCCACCTGTTTCAGGCTACCAGCCATCACTGGTGGTGGCCACAGTCAGTTCTTGCCATCTCTCAGACGTCTCTATGTTCCTTCAGTGCCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15707819 418 - 61074082 GGAGGGTGGGTGGGCACATGCCCTCTATAAA-------------TATCTGGCTGAATGAACATCTGTGCTACCAGGGGCAATGCAAGAAACTAGAACAGAGTGCATAACAGCT--GTATTGTCTTCTACCCACAGAC-------------------------------------------------------------------------------CCATCCAGTCTGGGGACAGGAGTGGCATGGACCAGTGGCACTC--GAGGCTGGGTTAAAGGCTGTTGTTGGTCAACTCCCAGTCTGGAGGGCAGGAAGAGGGATGGGATGCATGTCCCAAATGTCCCCCTGCCTCTTGTCCTGTGGAGTGCTGTGGGGGGTTCAGAGGTGGCACAGGTGGCACAACAGGACACATCT---GCTCCAGCCCA-TGCACAAGCCTGTTT-----------------------------------------------TCAG--------------------------GTGACCAGCCATCGCTGGTTGAGCCACAGGTC---TCG--CTATTGCGCTGTTGTCTTCACATGCCTGCAGCATCT i canFam3.chr9 I 9 C 0 e mm10.chr11 75882019 1002 + 122082543 I e nomLeu3.chr19 237301 3029 - 81552678 M a score=356160.000000 s hg38.chr17_GL383563v3_alt 255882 130 + 375691 CTGGCTGGCAGGGGGCAGGGGGCGTTCCTAAGAGGCGAGGGCTACGGAAAGA----CGACACGCTCCCACTCAAATAACACATAATTGCTGCTTTCGTAAATCTCAGATCAATAAGGCAGTCATGGGCCTCTTC s panTro4.chr17 233824 130 + 82630442 CTGGCTGGCAGGGGGCAGGGGGCGCTCCTAAGAGGCGAGGGCTACGAAAAGA----TGACACGCTCCCACTCAAATAACACATAATTGCTGCTTTCGTAAATCTCACATCAATAAGGCAGTAATGGGCCTCTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 119629 130 + 73212453 CTGGCTGGCAGGGGGCAGGGGGTGCTCCTAAGAGGCGAGGGCTGCGAAAAGA----TGACACACTCCCATTCAAATAACACATAATTGCTGCTCTAGTAAATCTCAGATCAATAAGACAGTAATGAGCCTCTTC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 149370 130 + 80904711 CCGGCTGGCAGGGGGCACGGGGCGCTCCTAAGAGGCGAAGGCTACGGAAAGA----TGATGTGCTCCCATTCAAATAACACGTCATTGCTGCTCCAGTAAATCTCAGGTCAGTAAGACGGTAATGAGCCGCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155512 130 + 80997621 CCGGCTGGCAGGGGGCACGGGGCGCTCCTAAGAGGCGAAGGCTACGGAAAGA----TGATGTGCTCCCATTCAAATAACACGTCATTGCTGCTCCAGTAAATCTCAGGTCAGTAAGACGGTAATGAGCCGCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150011 130 + 74645514 CCGGCTGGCAGGGGGCACGGGGCGCTCCCAGGAGGCGAAGGCTATGGAAAGA----TGACGTGCTCCCATTCAAATAACACGTCATTGCTGCTCCAGTAAATCTCAGGTCAGTAAGACAGTAATGAGCTGCCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147604 130 + 75148670 CCGGCTGGCAGGGGGCACGGGGCGCTCCCAGGAGGCGAAGGCTACGGAAGGA----TGACGTGCTCCCATTCAAATAACACGTCATTGCTGCTCCAGTAAATCTCAGGTCAGTAAGACAGTAATGAGCTGCCTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953065 134 - 1291538 CTGGCTGGCAGGGGGCCTGGGGGTCTCCTAAGAGGCTGGGGCCACGAAAAGATGACTGACATGCTCCCATTGAAATGACACACAATTGCTGTTCTAGCAAATCTCAGAACAGTAAGACAGTCATGAGCCTCCtc i calJac3.chrUn_GL286409 C 0 I 327 s mm10.chr11 75883021 128 + 122082543 CTGGCTGTCAGGGAGCC--AGGTATTCTCTAGAGCCTGGGGCTACGGAAAGA----TAAGATGCTCCACTTCAAATAGTACAGAATTGCTGCTCTATTAAATCTCAGATCAAGAGGGAAATAATGAGACATTTC i mm10.chr11 I 1002 I 9 s canFam3.chr9 15708237 108 - 61074082 CTGGCTGG----------------------GGAATCCAAGCCAGCAAAAAGA----TATCATGCTCCAGTTCAAATAATACACAATTGCTGCTCTATTAAATCTTGGATCAATATGTGAATAATGAGACCTTTC i canFam3.chr9 C 0 I 3 e nomLeu3.chr19 237301 3029 - 81552678 M a score=27724.000000 s hg38.chr17_GL383563v3_alt 256012 12 + 375691 CAATGGGCTCGG s panTro4.chr17 233954 12 + 82630442 CAATGGGCTCGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 119759 12 + 73212453 TAATGGGCTTGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 149500 12 + 80904711 TTACGGGCTTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155642 12 + 80997621 TTACGGGCTTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150141 12 + 74645514 TTACGGGCTTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147734 12 + 75148670 TTACGGGCTTGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75883158 12 + 122082543 TTATGAGTTTGG i mm10.chr11 I 9 C 0 s canFam3.chr9 15708348 12 - 61074082 TTATGGGCTTGG i canFam3.chr9 I 3 C 0 e calJac3.chrUn_GL286409 953199 327 - 1291538 I e nomLeu3.chr19 237301 3029 - 81552678 M a score=236328.000000 s hg38.chr17_GL383563v3_alt 256024 121 + 375691 TCTTTGTTCCCAGGTTCCAATAAAGAAAACGAAACAGGTGGTATTTTTGAAAACCCATGCGACAGCGAG---CA-----AGCCAGCCTCTACATCACCTTGGTGCAAACACAGCCCTTCACGATCTGTG s panTro4.chr17 233966 129 + 82630442 TCTTTGTTCCCAGGTTCCAATAAAGAAAACGAAACAGGTGGTATATTTGAAAACCTATGCGAGAGCGAAACCCATGTAGAGCCAGACTGTACATCAACTTCGTGCAAACACAGCCCTTCACGATCTGTG i panTro4.chr17 C 0 M 246 s ponAbe2.chr17 119771 121 + 73212453 TCTTTGTTCCCAGGTTCCAACAAAGAAAACGAAACAGGTGGTATTTTTTAAAACCCATGAGAGAGCGAG---CA-----AGCCAGCCTCTACATCAATGTGGTGCAAACACAAGACTTCACGATCTGTG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 149512 111 + 80904711 TCTTTGTTCCCAGGTTCCAAT----------AAACAGGTGATAATTTTTAAAACCCACGAGAGCGCGTG---CG-----AGCCAGCCTCTGCATCAGCTTGGTGCAAACACGGCACCACACAACCTCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155654 111 + 80997621 TCTTTGTTCCCAGGTTCCAAT----------AAACAGGTGATAATTTTTAAAACCCACGAGAGCGCGTG---CG-----AGCCAGCCTCTGCATCAGCTTGGTGCAAACACGGCACCTCACAACCTCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150153 111 + 74645514 TCTTTGTTCCCAGGTTCCAAT----------AAACAggtgataatttttaaaacccacGAGAGCGCGCG---CA-----AGCCAGCCTCTGCATCAGCTTGGTGCAAACACGGCACCTCACAACCTCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147746 111 + 75148670 TCTTTGTTCCCAGGTTCCAAA----------AAACAGGTAATAATTTTTAAAACCCACGAAAGCGTGCG---CA-----AGCCAGCCTCTGCATCAGCTTGGTGCAAACATGGCACTTCACAACCTCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953526 121 - 1291538 TCTTTGTTCCTAGGTTCTGATAAAGAAAACTAAACTGGTGGTGTTTTTAGAAACCCATGAGCAAGAGGG---CA-----AGCTGGCTTCTACATCACCTTGGTGCAAACACGGCCCTTCACCCTCTGTG i calJac3.chrUn_GL286409 I 327 C 0 s mm10.chr11 75883170 103 + 122082543 TCTTTGTTTTCGGATTCCAATACAGAAAATTAAGCAGCCAGTA---TTTAAAA-------GGAAGAACG---AA-----GGAAAGGTTGTGCATGAA---AGAGCAAGC-CGG--CCTCTCCACCTG-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15708360 120 - 61074082 TCTTTGTTCCTAGGTTCCAATAAAGAAAATTAGGCAGGTGGCATTTTAAAAAGCCAGGGACAGAGAGGG---CA-----AGCCAGCCACAATATCGACTCGGTGGAAAGGGAACACCGCGCCAT-TATG i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 237301 3029 - 81552678 M a score=207398.000000 s hg38.chr17_GL383563v3_alt 256145 115 + 375691 TCTAGGACAGTCCCGGGGCCCAGGGGTGGCCACTCACTTCCCTGCCTGAGA---TGGGCTTCCTCGGAGTGGATTTGCCC-AGGGCAAGCGAGTCCTGGCTTCCCGGG-CTTGGCTGCCT s ponAbe2.chr17 119892 115 + 73212453 TCAAGGACAGTCCCGGGGCCCAGGGGCGGCCACTCACTTCCCTGCCTGAGA---CGGGCTTCCTCGGAGTGGATTTGCCC-AGGGCAAGCGAGTCCTGGCTTCCTGGG-CTTGGCTGCCT i ponAbe2.chr17 C 0 M 1579 s rheMac3.chr16 149623 112 + 80904711 TTAAGGCCAGTCCGGGAGCCCGGGGG-G--CCCCCACTTCCCTGCCTGAGA---CAGGCTTCCTCGGAGTAGATTTGCCC-AGGGCAAAGGAGTCCTGGCTTCCCGGG-CTCGGCTGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155765 112 + 80997621 TTAAGGCCAGTCCGGGGGCCCGGGGG-G--CCCCCACTTCCCTGCCTGAGA---CGGGCTTCCTCGGAGTGGATTTGCCC-AGGGCAAAGGAGTCCTGGCTTCCCGGG-CTCGGCTGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150264 114 + 74645514 TTAAGGCCAGTCCGGGGGCCCggggg-ggCCACTCACTTCCCTGCCTGAGA---TGGGCTTCCTCGGAGTGGATTTGCCC-AGGGCAAGGGAGTCCTGGCTTCCCGGG-CTTGGCTGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147857 114 + 75148670 TTAAGGCCAGTCCGGGGGCCCGGGGG-GGCCCCTCACTTCCCTGCCTGAGA---CAGGCTTCCTCGGAGTGGATTTGCCC-AGGGCAGGGGAGTCCTGGCTTCCCAGG-CTCGGCTGCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953647 114 - 1291538 TCAAGGACAGTCCTGGGGTGCAGGGACGCCCACTCACTTCCTTGCCTGAGC---TGGGCTTCCTTGGAGTGGAACTGCCC-TGGGCAAGGGAGTCCTGGCTTCC-GGG-CTTGGCTGCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75883273 94 + 122082543 GCAAGA--AGGCCTTAGGCCTGGGGGAAGCCATT----------------------GGCTTTCCATGAGTAGGATCGCCT-TCTGCAATGGGACACTGGCTCCTGGGGTCCCCGCTGCT- i mm10.chr11 C 0 C 0 s canFam3.chr9 15708480 117 - 61074082 -TCGGGATGGTCTCCGGGCCTGAGGT-GCTCACTGACTTCTCTGCCTGGGGAATTGAGCTTCCACTGAGCAGAATTGCCCTAGGGGGAGCTGGTACCAGCTTCCCGGG-CGTGGCTGTCT i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 237301 3029 - 81552678 M e panTro4.chr17 234095 246 + 82630442 M a score=54111.000000 s hg38.chr17_GL383563v3_alt 256260 38 + 375691 CATGCACCCTGCAGCCTGGAACTGCGTCCGGGTGTTAA s rheMac3.chr16 149735 34 + 80904711 CACGCACCCTGCAGCCTGGAACTG----TGAGTGTTAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155877 34 + 80997621 CACGCACCCTGCAGCCTGGAACTG----TGAGTGTTAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150378 33 + 74645514 CATGCATCCTGCAGCCT-GAACTG----TGAGTGTTAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 147971 34 + 75148670 CATGCATCCTGCAGCCTGGAACTG----TGAGTGTTAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953761 38 - 1291538 CACGCACCCTGCAGCCTGGAGCTATGTCCGAGGGTTAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75883367 38 + 122082543 CGTGTACCTGGCAGCCTGAAAATACATCTGAGCACTAA i mm10.chr11 C 0 I 2885 s canFam3.chr9 15708597 38 - 61074082 CTTGCTTCCTGCAGCCTAGAACTGTGTCCAAGAGTGAA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234095 246 + 82630442 M a score=64943.000000 s hg38.chr17_GL383563v3_alt 256298 53 + 375691 -----A-CGATGAA-----GCTTCTGGGCCTAACCCAGGGCAGAAGCCACACAACTCCAGGCTT s rheMac3.chr16 149769 54 + 80904711 -----ACCAACAAA-----GCTTCTGGTCCTAACCCAGGGTAGAAGCCACACGGCTCCAGGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155911 54 + 80997621 -----ACCAACAAA-----GCTTCTGGTCCTAACCCAGGGTAGAAGCCACACGGCTCCAGGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150411 54 + 74645514 -----ACCAACAAA-----GCTTCTGGGCCTAACCCAGGGTAGAAGCCACACGGCTCCAGGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 148005 54 + 75148670 -----ACCAACAAA-----GCTTCTGGGCCTAACCCAGGGCAGAAGTCACACAGCTCCAGGCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953799 59 - 1291538 -----ACTGGTGAAGACTTGCTCAGGCACCTAACCCCGGGCAGAAGCGACACAACTCCAGGCCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15708635 59 - 61074082 ATAACACGAGTCTA-----GCTCCTGTGCCTGCCTCCAAGCAGAAGTGACAAAGTCTCAGGCCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234095 246 + 82630442 M a score=-7.000000 s hg38.chr17_GL383563v3_alt 256351 10 + 375691 TCAGACCTCG s canFam3.chr9 15708694 10 - 61074082 GCAGCCTGCC i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234095 246 + 82630442 M a score=1447.000000 s hg38.chr17_GL383563v3_alt 256361 14 + 375691 CACCCTCTCTCTCC-- s panTro4.chr17 234346 14 + 82630442 CACCCTCTCTCTCC-- i panTro4.chr17 M 246 T 14 s canFam3.chr9 15708704 14 - 61074082 --CTTGTTCTCTCCTT i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=452.000000 s hg38.chr17_GL383563v3_alt 256375 12 + 375691 ACCGTCAGACCT s canFam3.chr9 15708718 12 - 61074082 GCCCTTACACCT i canFam3.chr9 C 0 I 30 e mm10.chr11 75883405 2885 + 122082543 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234360 14 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 256387 2 + 375691 CG e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234360 14 + 82630442 T a score=5281.000000 s hg38.chr17_GL383563v3_alt 256389 134 + 375691 CACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACTCCCTCTCTCTCCACCGTCAGACCTCA s panTro4.chr17 234346 81 + 82630442 CACCCTCTCTCTCC-----------------------------------------------------CCGTCAGACCTCACACCCTCTCCCCACCGTCTGACCTCACACCCTCTCTCTCCACCGTCAGACCTCA i panTro4.chr17 T 14 I 28 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=5235.000000 s hg38.chr17_GL383563v3_alt 256523 65 + 375691 CTCCCTCTCTCCACCGTCAGACCTCGCACCCTCTCTC--CACCGTCAGACCTCACACCCTCTCTCCA s panTro4.chr17 234455 67 + 82630442 CACCCTCTCCCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCCCCA i panTro4.chr17 I 28 T 162 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=15537.000000 s hg38.chr17_GL383563v3_alt 256588 181 + 375691 CCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGACAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACACC s panTro4.chr17 234360 179 + 82630442 CCGTCAGACCTCACACCCTCTCCCCACCGTCTGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACC--CTCTCCCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCCCCACCGTCAGACCTCACACC i panTro4.chr17 T 162 T 54 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=9099.000000 s hg38.chr17_GL383563v3_alt 256769 106 + 375691 CTCTCTC--CACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACTCCCTCTCTCTCCACCGTCAGACCTCACTCCCTCTCTCCACCGTCAGACCTCGCACC s panTro4.chr17 234485 108 + 82630442 CTCTCTCTCCACCGTCAGACCTCACACCCTCTCCCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACACC i panTro4.chr17 T 54 T 52 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=8913.000000 s hg38.chr17_GL383563v3_alt 256875 102 + 375691 CTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACACCCTCTCT--CCACCGTCAGACCTCACTCCCTCTCTCTCCACCGTCAGACCTCA s panTro4.chr17 234541 104 + 82630442 CTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCCCACCATCGGACCTCACACCCTCTCTCTCCACCGTCAGACCTCA i panTro4.chr17 T 52 I 140 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=2764.000000 s hg38.chr17_GL383563v3_alt 256977 52 + 375691 CTCCCTCTCT--CCACCGTCAGACCTCGCACC--CTCTCTCCACCGTCAGACCTCG s panTro4.chr17 234785 56 + 82630442 CACCCTCTCTCCCCACCGACAGAACTCACACCCTCTCTCTCCACCGTGAGAGCTCA i panTro4.chr17 I 140 T 196 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=13655.000000 s hg38.chr17_GL383563v3_alt 257029 168 + 375691 CACCCTCTCTCC--ACCGTCAGACCTCACACCCTCTCTCC--ACCGTCAGACCTCACACCCTCTCTC--CACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGAGCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGACAGACCTCGCACCCT s panTro4.chr17 234645 174 + 82630442 CACCCTCTCTCCCCACCGTCAGACCTCACACCCTCTCTCCCCACCGTCAGATCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCCCACCGACAGAACTCACACCCT i panTro4.chr17 T 196 T 280 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 257197 52 + 375691 CTCTCTCCACCGACAGACCTCGCACTCTCTCTCCACCGACAGACCTCGCACG e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234819 280 + 82630442 T a score=864.000000 s hg38.chr17_GL383563v3_alt 257249 9 + 375691 CTCTCTCTC s panTro4.chr17 234539 9 + 82630442 CTCTCTCTC i panTro4.chr17 T 280 I 54 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=1193.000000 s hg38.chr17_GL383563v3_alt 257258 15 + 375691 CACCGTCAGACCTCA s panTro4.chr17 234602 15 + 82630442 CACCATCGGACCTCA i panTro4.chr17 I 54 T 213 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 257273 81 + 375691 CACTCTCTCTCCACCGTCAGACCTCACTCCCTCTCTCCACCGACAGACCTCACACTCTCTCTCCACCGACAGAGCTCACAC e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234617 213 + 82630442 T a score=2210.000000 s hg38.chr17_GL383563v3_alt 257354 23 + 375691 TCTCTCTCCACCGTCAGACCTCA s panTro4.chr17 234404 23 + 82630442 TCTCTCTCCACCGTCAGACCTCA i panTro4.chr17 T 213 I 111 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 257377 1 + 375691 C e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234427 111 + 82630442 I a score=3720.000000 s hg38.chr17_GL383563v3_alt 257378 42 + 375691 TCTCTCTCTCCACCGTCAGACCTCCCACCCTCTCTCCACCGT s panTro4.chr17 234538 42 + 82630442 CCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGT i panTro4.chr17 I 111 T 153 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 257420 9 + 375691 CAGACCTCG e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234580 153 + 82630442 T a score=8218.000000 s hg38.chr17_GL383563v3_alt 257429 160 + 375691 CACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACTCCCTCTCTCCACCGTCAGACCTCACTCCGTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCA s panTro4.chr17 234427 108 + 82630442 CACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCCCCACCGTCAGACCTCA----------------------------------------------------CACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCCCCACCGTCAGACCTCA i panTro4.chr17 T 153 I 28 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=3046.000000 s hg38.chr17_GL383563v3_alt 257589 36 + 375691 CTCCCTCTCTCCACCGTCAGACCTCACTCCCTCTCT s panTro4.chr17 234563 36 + 82630442 CACCCTCTCTCCACCGTCAGACCTCACACCCTCTCT i panTro4.chr17 I 28 T 51 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 257625 1 + 375691 C e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234599 51 + 82630442 T a score=3712.000000 s hg38.chr17_GL383563v3_alt 257626 41 + 375691 CACCGTCAGACCTCGCACCCTCTCTCCACCGTCAGACCTCG s panTro4.chr17 234548 41 + 82630442 CACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCA i panTro4.chr17 T 51 T 54 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=13275.000000 s hg38.chr17_GL383563v3_alt 257667 164 + 375691 CACCCTCTCTCTCCACCGTCAGGCCTCACACCCTCTCTCCACCGTCAGACCTCACACCCTCTCT--CCACCGTCAGACCTCACACC--CTCTCTCCACCGTCAGACCTCACTCCCTCTCTCTCCACCGTCAGACCTCACTCCCTCTCT--CCACCGTCAGACCTCGCACC s panTro4.chr17 234535 170 + 82630442 CACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCCCACCATCGGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCCCACCGTCAGACCTCACACCCTCTCTCCCCACCGTCAGATCTCACACC i panTro4.chr17 T 54 T 157 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 257831 7 + 375691 CTCTCTC e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234705 157 + 82630442 T a score=3834.000000 s hg38.chr17_GL383563v3_alt 257838 41 + 375691 CACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCG s panTro4.chr17 234548 41 + 82630442 CACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCA i panTro4.chr17 T 157 I 28 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=3643.000000 s hg38.chr17_GL383563v3_alt 257879 39 + 375691 CACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTC s panTro4.chr17 234617 39 + 82630442 CACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTC i panTro4.chr17 I 28 T 108 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=23341.000000 s hg38.chr17_GL383563v3_alt 257918 269 + 375691 CACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCC--ACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCGCACCCT s panTro4.chr17 234548 271 + 82630442 CACCGTCAGACCTCACACCCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCCCACCATCGGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCCCACCGTCAGACCTCACACCCTCTCTCCCCACCGTCAGATCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCTCCACCGTCAGACCTCACACCCTCTCTCCCCACCGACAGAACTCACACCCT i panTro4.chr17 T 108 I 34 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 258187 8 + 375691 CTCTCTCC e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234819 34 + 82630442 I a score=3646.000000 s hg38.chr17_GL383563v3_alt 258195 51 + 375691 ACCGTCAGACCTCGCACC--CTCTCTCCACCGTCAGACCTCGCACCCTCTCTC s panTro4.chr17 234853 53 + 82630442 ACCGTCAGAGATCACACCCTCTCTCTCCACCGTCAGACCTCACACTCTCTCTC i panTro4.chr17 I 34 T 87 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 258246 19 + 375691 CACCGTCAGACCTCGCACC e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234906 87 + 82630442 T a score=7207.000000 s hg38.chr17_GL383563v3_alt 258265 90 + 375691 CTCTCTCCACCGTCAGACCTCGCACCCTCTCTCCACCGTCAGACCTCGCACCCTCTCTCTCCACCGTCAGACCTCACTCCCTCTCTCTCC s panTro4.chr17 234819 90 + 82630442 CTCTCTCCACCGTGAGAGCTCACACCCTCTCTCCACCGTCAGAGATCACACCCTCTCTCTCCACCGTCAGACCTCACACTCTCTCTCTCC i panTro4.chr17 T 87 T 278 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=2540.000000 s hg38.chr17_GL383563v3_alt 258355 32 + 375691 ACCGTCAGACCTCACTCCCTCTCTCCCGGCCG s panTro4.chr17 234631 32 + 82630442 ACCGTCAGACCTCACACCCTCTCTCCCCACCG i panTro4.chr17 T 278 C 0 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e calJac3.chrUn_GL286409 953858 0 - 1291538 C e chlSab2.chr16 148059 0 + 75148670 C e papAnu2.chr16 150465 0 + 74645514 C e rheMac3.chr16 149823 0 + 80904711 C e macFas5.chr16 155965 0 + 80997621 C e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=44406.000000 s hg38.chr17_GL383563v3_alt 258387 26 + 375691 TCAGACCTCGCACCCTCTCTCCCCAC s panTro4.chr17 234663 26 + 82630442 TCAGACCTCACACCCTCTCTCCCCAC i panTro4.chr17 C 0 I 1936 s rheMac3.chr16 149823 26 + 80904711 TCAGACCGTGCACCCTCTCTCCCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155965 26 + 80997621 TCAGACCGTGCACCCTCTCTCCCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150465 26 + 74645514 TCAGACCGTGCACCCTCACTCCCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 148059 26 + 75148670 TCAGACCGTGCACCCTCTCTCCCCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953858 26 - 1291538 TCAGACTGCACACCCTCTCTCCCTGC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M a score=74580.000000 s hg38.chr17_GL383563v3_alt 258413 75 + 375691 TCCTGTCTCAGTCCCTCCATGTGCTTCTTTTGCAAAGAAATGTATATTCTCTCTACCCCCAAGAACACAGGGGAG s rheMac3.chr16 149849 75 + 80904711 TCCTGTCTCAGTCGCTCCACGAGCTTCTTTTGCAAAGAAACGTATATTCTCTCTACCCCCAAGAACACCGGAAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 155991 75 + 80997621 TCCTGTCTCAGTCGCTCCACGAGCTTCTTTTGCAAAGAAACGTATATTCTCTCTACCCCCAAGAACACCGGAAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 150491 75 + 74645514 TCCTGTCTCAGTCGCTCCACGAGCTTCTTTTGCAAAGAAACGTATATTCTCTCTACCCCCAAGAACACCGGAAAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 148085 75 + 75148670 TCCTGTCTCAGTTGCTCCACGAGCTTGTTTTGCAAAGAAACGTATATTCTCTCTACCCCCAAGAACACCGGAAAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953884 48 - 1291538 TCCTGTCTCAGACTCACCAC---------------------------CCTTCCTACGCCCAAGAACACAGGGAAG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15708730 30 - 61074082 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234689 1936 + 82630442 I a score=260806.000000 s hg38.chr17_GL383563v3_alt 258488 243 + 375691 GGGGTTCCCCAG----------------------------------------------------------------------------------GGACCTGCCCACGggacacaggctttggggcaggagagagcagggtgtgccgtttagaggtgaacttggactcggtactcgcct--tctgagcctcac---------------ttcctcatctgtaagttggtggtaacaggc----ccccccacaccc-caggttgcagatgaggggatcaagggagacgg-tcatgaaagtgctcagcacCATAAAAGGTTAGGTA-GGCGGCAAcctcagacctttatagcc s rheMac3.chr16 149924 346 + 80904711 GGGGTTCCCTAGGGACTGCCCATGGGACACAGGCTTCTGCAAAGAAACGTATATTCTCTCTACCCTTAAGAACACCGGAAAGGGGGTTCCCTACGGA-CTGCCCATGggacacaggctttggggcaggacagagcagggtgtgccgttgagaggcaatcttggacttggaactcaccttctctgagcctcatctgtaggctcagaggttcctcatctgtaggccgctggtaataggcgcatccccccacccccgcaggctgcagatgaggcaatcgagggaagtgg-ccatgaaagtgcttagcaTCACAAAAGGTTAGGCA-GGCAGCAACCTCAGGCTTCTATATTC i rheMac3.chr16 C 0 I 32 s macFas5.chr16 156066 264 + 80997621 GGGGTTCCCTAG----------------------------------------------------------------------------------GGA-CTGCCCATGGGACACAGGCTTTGGGGCAGGACAGAGCAGGGTGTGCCGTTGAGAGgcaatcttggacttggaactcaccttctctgagcctcatctgtaggctcagaggttcctcatctgtaggccgctggtaataggcgcatccccccacccccgcaggctgcagatgaggcaatcgagggaagtgg-ccatgaaagtgcttagcaTCACAAAAGGTTAGGCA-GGCAGCAACCTCAGGCTTCTATATTC i macFas5.chr16 C 0 I 30 s papAnu2.chr16 150566 264 + 74645514 GGGGTTCCCCAG----------------------------------------------------------------------------------GGA-CTGCCCATGGGACACAGGCTTTGGGGCAGGACAGAGCAGGGTGTGCCGTTGAGAGGCAACCTTGGACTTGGAACtcaccttctctgagcctcatctgtAGGCTCAGAGGTTCCTCATCTGTAGGTCGCTGGTAACAGgcgcctccccccacccccgcagGCTGCAGATGAGGCGATCGAGGGAGATGG-CCAAGAAAGTGCTTAGCATCACAAAAGGTTAGGCA-GGCAGCAACCTCAGGCTTCTATATTC i papAnu2.chr16 C 0 I 10 s chlSab2.chr16 148160 221 + 75148670 GGGGTTCCCCAG----------------------------------------------------------------------------------GGA-CTGCCCATGggacacaggctttggagcaggacagagcagggtgtgccgttgagaggcaaccttggacttggaactcaccttctctgagcctcgt---------------ttcctcatctgtaggtcggtggtaacaggc----cccctcccccccgcaggcggcagatgaggcgatggagggaggtgg-tcgtgaaagtgctt-------------------------agcaacctCAGGCTTTTATAGCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 953932 237 - 1291538 GGGGTTCCCCAG----------------------------------------------------------------------------------GAACCTGCCCACAGGACACAGGTTTTGGGGCAGGAGGGAACAGGGTGTGGCATTCAGAGgtgacctcagacttggtacctaccttctctgagcctcat---------------ttcctcatctgccagttggtggtaacag------ccctcca-------aggttgcagaagaggagatcaagggagatgt-tcatgaacgtgcttagcacaatAAAAGTTCAGGCG-GGCGGCAATCTCAGACCTTTATCGCC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15708760 237 - 61074082 ggggtggctcag----------------------------------------------------------------------------------gacacagtccacggaacacaggctttggggcaaga--aagcacagtccaccatttagatgcaaccttgggattgtttctaagtttccctgagcctcat---------------ttccttgctcataaaatggtggtaataggcagactcct------------gccactgttggaaggatcaagggagatgattcatgaaagtgcttagcacactgcgtggtaaagagcaGCAACAAGCACCGTTCTTTCCTGC- i canFam3.chr9 I 30 C 0 e mm10.chr11 75883405 2885 + 122082543 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234689 1936 + 82630442 I a score=4654.000000 s hg38.chr17_GL383563v3_alt 258731 7 + 375691 atgcctg s macFas5.chr16 156360 7 + 80997621 ATTCTCG i macFas5.chr16 I 30 I 15 s papAnu2.chr16 150840 7 + 74645514 ATTCTCG i papAnu2.chr16 I 10 I 15 s chlSab2.chr16 148381 7 + 75148670 ACGCCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 954169 7 - 1291538 ACTCCTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15708997 7 - 61074082 ACAcctg i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e rheMac3.chr16 150270 32 + 80904711 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234689 1936 + 82630442 I a score=1143685.000000 s hg38.chr17_GL383563v3_alt 258738 935 + 375691 tctcagtgaaggcagccagcatccatcagtcacacaagccacaacccagcactcatcctgggcccccatcgtccctccttcctgcccagataatccatctccaagaact-caaatctctctccaacct-ctcaattccccttcagccccgtccctgatctctgctg---------ccaccgcccacgcccacaccaaggccgcccagcagatctct-ctaccccaccgc-gctgtcctccagctggttcccgacatggcagccaggccgattttctcaagaggcaaatctaatcatgtcacctctcccatccctcccaacttaaaagccatcagaggcttcccgctgctct-ggggtgaccaccgcctcacttcatacggc------------attcgggccggccctgcct-----------------------------cctgctctacttcctcagccccgaccctctgagctccagccgtgtgggccgtttgtcagcccctggtcct-----------tctgccacaggacctttgcacgtgttgccccctctgtgtgg-----------ccacgctgtctcttcattaacctacacacccctcggacctcagcaaaagcaccacatcttcaaggaagacttccgcaacactccttccacaatgagagcctccagaatgggctcctgcctctt---ctccgctgtcaaggt-tgtga-ttttaccctccgctgtgtggctgcagggctcctgtgacttcccctgctgggccgtcatcttcccaagggcagaggccacgtctatttctgttcaccctcctgctccctgtgcccggcacagtgactATTTGCAGAAGAACGGATTGAAC----AAATGGAAGCTACTTAAGATATTACAGTTGAAAAAGCAAGACAGGCTCCCTCCCGGAACATGCCGACCTGCCGGGAAGACAAGCTGCACGGAGGCGTGAAGGCACTCGCTCAGCGACACGAGGCAGG--GTCCAATCACGTCCACATT s rheMac3.chr16 150302 912 + 80904711 TCTCGGTGAAGGTGGCCAGCATCTGTCAGTCACGCAAGCCACAGCCCAGAGCTCATCCTGGGCCCCCATCGTCCCTCCCTCCTGCCCAGATAATCCATCTCCAAGAATT-CAAATCTCTCTCCAACCT-GTGAATTCCCCTGCGGCCCCGTCCCTGATGTCTGCTG---------CCAGTGCTCATACCCACACCAAGGCCG-CCGGCAGATCTCC---CCCCGACCGCGGCTGTCCTCCAACTGGTTCCCAACATGGCAGCCAGGCCAGTCTCC-----------------TCGTGTCACTTCTCCCATCCCTCCCAACGTAAAAGCCATCAGAGGCTCCCCGCTGCTCT-GGGGTGACCATCACC-CACTTCGGAAGGC------------GTTCGGGCTGGT------------------------------------CCTGCTctacttccccgtcctccaccctc--agctccagccgtgtgggccttttgtcagcccctggtcct-----------tctgccacagggcctttgcacgtgttgccccctcagtctgggatgcacttgaccacactgtctcctcattaacctacacagccctcagacctcagc--aagcaccacgtcttcaaggaagccttccgcg--actccttccacggtaacagcctccagaatgggctcctggctctt---ctccgctgtccaggg-tgtgg-ttttaccctccgctatgt-gctgtagggctcctgtcacttcccccgctgggctgtcagctccccgagggcagacgccacgtctatttctgttcacctttctgctccctgtgcctggcacaATGGCTATTTACAGAAGAACGGAATGAAC----AAACGGAAGCTACTTAAGATATTACAGTTGAAAAGGTGAGACGGGGTCCCTCCTGGAATATGCCAATCTGCTTGGAAGACAAGCTGCACGGAGGCGTGAAGGCGCTCGCTCCACGGCACGAGGCAGG--GCCCAATCGCGTCCACACG i rheMac3.chr16 I 32 C 0 s macFas5.chr16 156382 914 + 80997621 TCTCGGTGAAGGTGGCCAGCATCTGTCAGTCACGCAAGCCACAGCCCAGAGCTCATCCTGGGCCCCCATCGTCCCTCCCTCCTGCCCAGATAATCCGTCTCCAAGAATT-CAAATCTCTCTCCAACCT-GTGAATTCCCCTGCAGCCCCGTCCCTGATGTCTGCTG---------CCAGCGCTCATACCCGCACCAAGGCCG-CCGGCAGATCTCC-CTCCCCGACCGCGGCTGTCCTCCAACTGGTTCCCAACATGGCAGCCAGGCCAGTCTCC-----------------TCGTGTCACTTCTCCCATCCCTCCCAACGTAAAAGCCATCAGAGGCTCCCCGCTGCTCT-GGGGTGACCATCACC-CACTTCGGAAGGC------------ATTCGGGCTGGT------------------------------------CCTGCTctacttccccgtcctccaccctc--agctccagccgtgtgggccttttgtcagcccctggtcct-----------tctgccacagggcctttgcacgtgttgccccctcagtctgggatgcacttgaccacactgtctcctcattaacctacacagccctcagacctcagc--aagcaccacgtcttcaaggaagccttccgcg--actccttccacggtaacagcctccagaatgggctcctggctctt---ctccgctgtccaggt-tgtga-ttttaccctccgctatgt-gctgtagggctcctgtcacttcccccgctgggctgtcagctccccgagggcagacgccacgtctatttctgttcacctttctgctccctgtgcctggcacaACGGCTATTTACAGAAGAACGGAATGAAC----AAACGGAAGCTACTTAAGATATTACAGTTGAAAAGGTGAGACGGGGTCCCTCCTGGAATATGCCAATCTGCTTGGAAGACAAGCTGCACGGAGGCGTGAAGGCGCTCGCTCCACGGCACGAGGCAGG--GCCCAATCGCGTCCACACG i macFas5.chr16 I 15 C 0 s papAnu2.chr16 150862 914 + 74645514 TCTCGGTGAAGGTGGCCAGCATCTGTCAGTCACGCAAGCCACAGCCCAGAGCTCATCCTGGGCCCCCATcgtccctccctcctgcccagaTAATCCGTCTCCAAGAATT-CAAATCTGTCTCCAACCT-GTGAATTTCCCTGCAGCCCCGTCCCTGATCTCTGCTG---------CCAGCGCTCATACCCACACCAAGGCCG-CCGGCAGATCTCC-CTACCCGACCGCCGCTGTCCTCCAACTGGTTCCCAACGTGGCAGCCAGCCCAGTCTCC-----------------TCGTGTCACTTCTCCCATCCCTCCCAACGTAAAAGCCATCAGAGGCTCCCCGCTGCTCT-GGGGTGATCACCACC-CACTTCGGAAGGC------------GTTCGGGCTGGC------------------------------------CCTGCTCCACttccccatcctccaccctc--agctcCAGCCGTGTGGGCCTTTTGTCAGCCCCTGGTCCt-----------tctgccacagggcctttgcacgtgtTGCCCCCTCTGTCTCGGATGCACTTGACCACACTGTCTCCTCATTAACCTATGCAGCCCTCAGACCTCAGC--AAGCACCACGTCTTCAACGAAGCCTTCCTCG--ACTCCTTCCACGGTAAGAGCCTCCAGAATGGGCTCCTGGCTCTT---CTCCGCTGTCCAGGT-TGTGA-TTTTACCCTCCACTGTGT-GCTGTAGGGCTCCTGTCACTTCCCCCGCTGGGCTgtcagctccctgagggcagaggccACGTCTATTTCTGTTCACCTTCCTGCTCCCCGTGCCTGGCACAATGGCTATTTACAGAAGAACGGAATGAAC----AAACAGAAGCTACTTAAGATATTACAGTTGAGAAGGTGAGACGGGGTCCCTCCTGGAACATGCCAATCTGCTGGGAAGACAACCTGCATGGAGGTGTGAAGGCGCTCGCTCCACGGCACGAGGCAGG--GCCCGATCGCGTCCACAAG i papAnu2.chr16 I 15 C 0 s chlSab2.chr16 148388 887 + 75148670 TCTCGGTGAAGGCG-----------------------GCCACAGCCCAGAGCTCATCCTGGGCCCCCATCGTGCCTCCCTCCTGCCCAGATAATCCGTCTCCAAGAATT-CAAATCTCTCTCCAACCT-GTGAATTCCCCTGCAGCCCCGTCCCTGATGTCTGCTG---------CCCGCGCTCATACCCACACCAAGGCCG-CCGGCAGATCTCC-CTACCCGACCGCGGCTGTCCTCCAACTGGTTCCCAACATGGCAGCCAGGCCAGTCTCC-----------------TCGTGTCACTTCTCCCATCCCTCCCAACGTAAAAGCCATCAGAGGCTCCCCGCTGCTCT-GGGGTGACCACCACC-CACTTCAGAAGGC------------GTTCGGGCTGGC------------------------------------CCTGCTctacttccccgtcctccaccctc--agctccagccgtgtgggccttttgtcagcccctggtcct-----------tctaccacagggcctttgcacgtgttgccccc---gtctgggatgcacttgaccacactgtctcctcattaacctacgcagccctcagacctcagc--aagcaccacgtcttcaaggaagccttccgcg--actccttccacggtaagagcctccagaatgggctcctgtctctt---ctccgctgtccagct-tgtga-ttttaccctccgctgtgt-gctgtagggctcctgtcacttcccccgctgggctgtcagctccctgagggcagacgccacatctatttctgttcaccttcctgctccccttgcccggcacaatggctgTTTACAGAAGAACGGAATGAAC----AAACGGAAGCTACTTAAGATATTACAGTTGAAAAGGTGAGAC-AGGTCCCTCCTGGAACATGCCAATCTGCTTGGAAGACAAGCTGCACGGAGGCGTGAAGGCGCTCGCTCCACGGCACGGGGCAGG--GCCCGATCGCGTCCACCCG i chlSab2.chr16 C 0 I 152 s calJac3.chrUn_GL286409 954176 895 - 1291538 TTTCAGGGAAGGCAGCCAGCATCCATCAGTCACAAAAGCTGCAACCCAGCACACATCCTGGGCCCCCATCATTCCTCCCTCCTGCCCAAATAATCTGTCTCCAAGAACTCCAGCTCTCTCTCCAGCCTGGTCAGTTCCCCTCTAGCCCCGTCCCTGATCTCTGCTG---------CCACTGCCCATGCCCACACCAAGGCTGCCCGGCAAAtctcc-ctgccccactgtgaccgtcttctaactggttcccaacactgcagccaggctgatcttttcaagatgcaaatctaatcacatcacttctcccatccctcccaacttaaaagccaacagaggcttcctgctctgct-gggacgaccaccgccccacttgataaggc------------actcgggctggccttgcctcctctggacctcagctcacacctaccttccctgttccatttcctcgtcctccacctcc-gagctccagctgtgtgga-gtttcatcagcccctggtcct-----------tctgccacaaaacctttgcatgtgttgccctctctgtctgg---------ggctacaccatctcctcattaacctatgtagccctcagacctcagcagaagcaccacgtcttcaaggaagccttctgaa--accacttccaccataagagcttccagaatgggctcttgcctcat---c-------tcaagatctgtga-ttttaccttgcactggtg-gctgtggggctcctgtcacatccctggctgggctggccgctcctgaggggcagaggccacgtctgtttctgttcaccttcctgttcccagtgcccagcacaatggccATTTGC---AGAACTGAATGAAC-----AATGGAAGCTACTTAAGATATCACAATTGAAAAGGCAAGAC-----------------------------------------------------------ATGCTTGCTCCACAGCATGAGGCAGG--GTCCGATCACATCCACACT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15709004 985 - 61074082 tttcagtgaagggtgccaacactcatcagtcacacaagc--aaacccagaa-tcatccttggtccccatgctccctccttccca-ccaaacaacccactactaagaactctacatctcacctgacact-gtcacctcccctcta-ccgtgcccctactccaccctgtggtcacctccagtgcccg-gcctgcactgcggcctcccagtagatctcctcacccctatcttggccagcttccagttggttcccggcatagcagcaggagtgatcttttcaagatgcaaatctaatcatgtcatttctcctgtccctgccagcttaaaaggctccagagtcttcccactgttttctggatgaagaccacc-tgcttttacatgctgtgcaacacctgctcaggctgggctttcctcatctgcctcagtttacatccctctcc--cctgttttactaccttgctctccacgtgctgagacctagccttgctggtttgcctttagtccctggtcctcacttgctgcctctgccacaagacctttgcatatgctgctccctctgtcagggatatactaggccatactctctcattgttaacctatgcatccttcagacctcagcaaaagcaccacttcatcaaggaagtgttccctg--acttcttaccccattggagcttccataacaggctcttgcctcttttcctccattgtcacggt-caagatttttgccctcca-------------------ctgtcactgcctctactaggctgtcatatccccaactgtggaggccatgtccatttctgttcactttcctgtttcc-aTGACTGTCACAATGAATATCTGCGAAATGAATAAATGAACAAATAAATAGGAGATACTTTTAGTATTATAATTGAGGAGGCAAGACATAGTCCTTCCTAGAATGTGCCAATTTGTTGGGGAGATGAGACACCCAGAGGCAGGAAA-----CAGTATACACCACAAGCCAGGGTGTGCACTCCTGTCCACACC i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234689 1936 + 82630442 I a score=33795.000000 s hg38.chr17_GL383563v3_alt 259673 21 + 375691 GAGTGATGCTGACCAGCAGGA s rheMac3.chr16 151214 21 + 80904711 GAGTGATGCTGACCAGCAGGA i rheMac3.chr16 C 0 I 532 s macFas5.chr16 157296 21 + 80997621 GAGTGATGCTGACCAGCAGGA i macFas5.chr16 C 0 I 301 s papAnu2.chr16 151776 21 + 74645514 GAGTGACGCTGACCAGCAGGA i papAnu2.chr16 C 0 I 38 s chlSab2.chr16 149427 21 + 75148670 GAGTGATGCTGACCAGCAGGA i chlSab2.chr16 I 152 C 0 s calJac3.chrUn_GL286409 955071 21 - 1291538 GAATGATGCTGACCAGGAGCA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15709989 21 - 61074082 AAGCGATGTTCACCAGCAGGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234689 1936 + 82630442 I a score=184127.000000 s hg38.chr17_GL383563v3_alt 259694 148 + 375691 TTGTGGGAGGCCAAACCAGGGAGAGCCACACAGCGGGCAAGTGTCCGAGGAGGT-GGGGTGGTGGCCAGGTGGGCCTCAGTCTCAGGG--TATGGAGCATAAACCCAGGCTGGCCCGGCCACAGGGGAAATGACTCCGGGAATCCTTCACT s rheMac3.chr16 151767 147 + 80904711 TTGTGAGAGGCCATGCCAGAGACGGCCGCACACGGGGTGAGTGTCCGAGGAGGT-GGGGTGGTGGCC-GGGGGGCCTCATTCTCAGGG--TGTGGAGCATAAACCCAGGCTGGCCCGGCCACAGCGGAAATGACACCAGAAGTTCTTCACT i rheMac3.chr16 I 532 C 0 s macFas5.chr16 157618 147 + 80997621 TTGTGAGAGGCCATGCCAGAGACAGCCGCACACGGGGTGAGTGTCCGAGGAGGT-GGGGTGGTGGCT-GGGGGGCCTCATTCTCAGGG--TGTGGAGCATAAACCCAGGCTGGCCCGGCCACAGCGGAAATGACACCAGAAGTTCTTCACT i macFas5.chr16 I 301 C 0 s papAnu2.chr16 151835 146 + 74645514 TTGTGAGAGGCCACGCCAGAGACAGCCGCACAC-GGGTGAGTGTCCGAGGAGAT-GGGGTGCTGGCC-GGGGGGCCTCATTCTCAGGG--TGTGGAGCATAAACTCAGGCTGGCCCGGCCACAGCGGAAATGACACCAGAAGTTCTTCACT i papAnu2.chr16 I 38 C 0 s chlSab2.chr16 149448 148 + 75148670 CTGTGAGAGGCCACGCCAGAGACAGCCGCGCACGGGGTGAGTGTCCGAGGAGGT-GGGGCGGTGGCCAGGGGGGCCTCATTCTCAGGG--TGTGGAGCATAAACCCAGGCTGGCCCGGCCACAGGGGAAATGATGCCGGGAGTTCTTCACT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 955092 145 - 1291538 CTGTGGGAGCCCAAACCAGGGAGAGCCGCACACAGGACAAGTGTCCAGGGGGGT-GGGGGGGTGGCCAGGTGGGCCTCATTCTCAGGA--TATGGAGCATGAACCCA-GCTGGCTCGGCCAGAA-AGAAATGAC-CCAAGAATCCTTCACT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15710010 136 - 61074082 -------------CAACAGGAGAGCCCATATGTAGGGC-AGTGTCCAAGGTGGTAGGGATGCTGGCCAGGTGGGCCTCACTGTTAGGGTATATGGGGCATGAATCGAGGCAGCCCCAGTCACAGAAGAAATGACACTGGG-GTCCTTTGTT i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e nomLeu3.chr19 237301 3029 - 81552678 M e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234689 1936 + 82630442 I a score=515997.000000 s hg38.chr17_GL383563v3_alt 259842 354 + 375691 GAGGGTG----GGAAGCGGGGATGTTTACCAGACCATTCCCATGACGGCTCCTGCCTGCCTCCCCCGGGGTGCGTGCCGC-GGCCGCCTATGTGTGCAGACCCGTCCCAAGGCCTGATCAGGCACCTTCCTCAATGTCCTTCTTATCCAGGGCCACTTCAGTGACATTTCTGCTTCCTGCGACTCCCCGTCCCACCC------CTTCTCCTTCCCAGATGGCACCCAAGAGTCACAA-TGCGACAGAAGGTTCTGCTGGGC----CACTCCAAAGTTCAGGTACTTCATGCCCAGGCT-GGCCTTTGAGTCCTCA----------CCGATCCATTTCATGATGAGGAATTCCACCACGCTCC--------------------------------------------------CGC--------AGATCAGAAGACGGGA s nomLeu3.chr19 240330 356 - 81552678 GAGGGTG----GGAAGCAGG-ACGTTTACCCGACCCTTCC-ATGACGGCTCCTGCCTGCCTCCCCCGGG-CGCGTGCTGC-G-CCGCCTGTGTGTGCAGACCCGTCCCAGAGCCTGATCAGGCAC-TTCCTCAACGTCCTTCTTATCCAGG-CCACGTCAGCGACGCTTCTGCTTCCTGCAACTCCCCATCCCAACC------CTTCTCCTTCCCAGATGGCACCCAAGAGTCACAA-CACGACAGCAAGGTCTGCCGAGC----CACTGCAGAGTTCAGGTACTTCATGCCCAGGCT-GGCCTTTGAGTCCTCA----------CCGATCCATTTCATGGTGCGGAATTCCACCACGCTCC--------------------------------------------------CACCTTCCCACAGGTCAGAAGATGGGA i nomLeu3.chr19 M 3029 C 0 s rheMac3.chr16 151914 371 + 80904711 AAGGGTG----GGGAGTGCGGATGTTTACCTGACCCTTCCCGTGACGGCTCCTGCCTGCCTCCCGCGGG-CTCATGCTGC-GGCCGCCTACGTGTGCAGACCCGTTCCAAGGCCTGATCAGGCACCTTCCTCAACGTCCTTCTTATCCAGG-TCACTTCAGTGATGCTTCTGCTTCCCGCAATTCCCCATCCCACCC------CTTCTCCTT-CCAGACGGCACCCAGGAGTCAAAA-CGCAACAGAACAGCCTGCCGGGC----TGCCCCGAAGTTC-GGTGCATCACGCCCAAGCT-GGCCTTCGAGTCCTCA----------CCGATCCATTTCACGATGCGGAATTCCAGCACGCTCCGTGGTGCGGT-------------------------------------TCCCACGCGCCCACAGATCAGAAGATGGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 157765 371 + 80997621 AAGGGTG----GGGAGTGCGGATGTTTACCTGACCCTTCCCGTGACGGCTCCTGCCTGCCTCCCGCGGG-CTCATGCTGC-GGCCGCCTACGTGTGCAGACCCATTCCAAGGCCTGATCAGGCACCTTCCTCAACGTCCTTCTTATCCAGG-TCACTTCAGTGATGCTTCTGCTTCCTGCAATTCCCCATCCCACCC------CTTCTCCTT-CCAGACGGCACCCAGGAGTCAAAA-CACAACAGAACAGCCTGCCGGGC----TGCCCCGAAGTTC-GGTGCATCACGCCCAAGCT-GGCCTTCGAGTCCTCA----------CCGATCCATTTCACGATGCGGAATTCCAGCACGCTCCGTGGTGCGGT-------------------------------------TCCCACGCGCCCACAGATCAGAAGATGGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 151981 370 + 74645514 AAGGGTG----AGGAGTGCGGATGTTTACCTGACCCTTCCCGTGACggctcctgcctgcctcccccGGG-CTCATGCTGC-AGCCGCCTACGTGTGCAGACCCGTTCCAAGGCCTGATCAGGCACCTTCCTCAACGTCCTTCTTATCCAGG-TCACTTCAGTGATGCTTCTGCTTCCTGCAATTTCCCATCCCACCC------CTTCTCCTT-CCAGACGGCACCCAGGAGTCAAAA-CACAACAGAACGGTCTCCTGGGC----CGCCCTGAAGTTC-GGT-CGTCACGCCCAAGCT-GGCCTTTGAGTCCTCA----------CCGATCCATTTCACGATGCGGAATTCCAGCACGTTCCGTGGCGCGGT-------------------------------------TCTCACGCGCCCACAGATCAGAAGATGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 149596 370 + 75148670 AAGGGTG----GAGAGTGCAGATGTTTACCTGACCCTTCCCGTGACGGCTCCTGCCTGCCTCCCCGGGG-CTTGTGCTGC-GGCCGCCTACATGTGCAGACCCGTTCCAAGGCCTGATCAGGCACCTTCCTCAACGTCCTTCTTATCCAGG-TCACTTCAGTGATGCTTCTGCTTCCTGCAATTCCCCATCCCACCC------ATTCTCCTT-CCAGACGGCACCCAGGAGTCAAAA-CACAGCAGAACGGTCTCCTGGGC----TGCCCCGAAGTTT-GGT-CGTCACGCCCAAGCT-GGCCTTCGAGTCCTCA----------CCGATCCATCTCGCGATGCAGAATTCCAGCATGTTCCATGGCGCGGT-------------------------------------TCCCACGCTCCCACAGATCAGAAGATGGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 955237 337 - 1291538 AAGGGTG----GGGAGCGGGCATGTTTAACC-CCCCTTCCCACAATGGCTCCTGCCTGCTTCCC-CGGG-TGCGTG----------------------------------------------------------------------------CCACTTCAGTGATGCTTCTGCTTCCTGGAACTCCCCACCCCACCC------CTTTGCCTTCCCAGACAGCTCCTAAGAGTCAAAG-TATGACAGAAAGGTCTGCCAGGCCACACACTCCAAAGTTTAGGTGCTTCACACCCAGGCT-GGCCTGTGAGTCCTAA----------CCGATCCATTTCACAATGCAGAA-TCCACGAGGCTCTGTGGTGCGGTGGATTCTGTGGGAGCTCTCTTTAATCTGTGGGAGCTCTCCCAAGCTCCCACAGATTAGAAGATGGGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15710146 384 - 61074082 AAGGATGGTGTGGTGGGAGGGATGTGTCCCCCACCCTTTGTTTGACTGCTTCTGCCTGCTGCCCCAGGG-TACACCCTACAGGCCACCTGTGTGTGCAGACTCAGCCCAAGATCTCATTGGGTGCTCTCTTCAACATCCTCATAATCCTGG-CCACTTCAGTTACCCCTCTACTCCCTGAAAATGCGCATTGCAATCCAACAGCATCACCTTCCCACACCACAGCCAAGAAGCAAAAGTACAA------GGTCTATGAGTC-ACATGCACCAGAGCTCACGCACTTTACTCCCAGGCCAGGCTTTCTCATCCTCAGTGTGAGCCCCTGACCTGTTTCAGG-----GAGATCC--CATGCTCTCTGGG--GGT-------------------------------------TCCCAACCTACTGCCAATTAGGAGAAGGGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e ponAbe2.chr17 120007 1579 + 73212453 M e panTro4.chr17 234689 1936 + 82630442 I a score=194237.000000 s hg38.chr17_GL383563v3_alt 260196 87 + 375691 AGGGGCTTAGTGCCAATGTAGGGGGAGGGAAGGAAACTGCTCTGAAAGCAGACGCCGCCATCTCACAGCACCCGCGGTCTGGAG----TCA---- s panTro4.chr17 236625 86 + 82630442 AGGGGCTTAGTGCCA-TGTGGGGGGAGGGAAGGACACTGCTCTGAAAGCAGATGCCGCCGTCTCACAGCACCCGCGGTCTGGAG----TCA---- i panTro4.chr17 I 1936 C 0 s nomLeu3.chr19 240686 91 - 81552678 AGGGGCTTAGTGCCAATGTCGGGGGAGGGAACGAAACTGCTCTGAAAGCAGACGCCGCCGTCTCACAGCACCCGCGGTCTGGAGTCACTCA---- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 152285 87 + 80904711 AGGGGCTTAGTGCCAACACGGGGGGAGGGAACGAAACTGCTCTGAAAGCAGATGTGGCCGTCTCACAGCAGCCGTGGTCTGGAG----TCA---- i rheMac3.chr16 C 0 I 70 s macFas5.chr16 158136 87 + 80997621 AGGGGCTTAGTGCCAACACGGGGGGAGGGAACGAAACTGCTCTGAAAGCAGATGTGGCCATCTCACAGCAGCCGTGGTCTGGAG----TCA---- i macFas5.chr16 C 0 I 4 s papAnu2.chr16 152351 87 + 74645514 AGCGGCTTAGTGCCAACACGGGGGGAGGGAACGAAACTGCTCTGAAAGCAGATGCCGCCGTCTCACAGCAGCCGCGGTCTGGAG----TCA---- i papAnu2.chr16 C 0 I 4 s chlSab2.chr16 149966 87 + 75148670 AGGGGCTTAGTGCCAACACGGGGGGAGGGAACGAAACTGCTCTGAAACCAGATGCCGCCGTCTCACAGCAGCCGCGGTCTGGAG----TCA---- i chlSab2.chr16 C 0 I 70 s calJac3.chrUn_GL286409 955574 85 - 1291538 -GGGGCTTAGTGCCAGTGTCGGGGGAGGGAATGAAACTGCTCTGAAAGCAGACGTCACCATCTTACAGTGTCCGTGG-CTGCGA----CCA---- i calJac3.chrUn_GL286409 C 0 I 4 s canFam3.chr9 15710530 89 - 61074082 GGGGGCGCAGCACCAGCACT--GGGCAGGAATGACGCTGCAGGGCATGCAGACTCCAACACCTCCCAGGAacagaggtctgaga----gcattta i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e ponAbe2.chr17 120007 1579 + 73212453 M a score=34166.000000 s hg38.chr17_GL383563v3_alt 260283 53 + 375691 GTCACTGG----CAGCCTCACACTCCTGGACGGGCCGGGACAGCTTCACAGCGTCAC s panTro4.chr17 236711 53 + 82630442 GTCACTGG----CAGCCTCACACTCCTGGACGGGCTGGGACAGCTTCACAGCATCAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 240777 53 - 81552678 GTCACCGG----CAGCCTCACACTCCTGGACGGGCCAGGACAGCTTCACAGTGTCAC i nomLeu3.chr19 C 0 I 3 s macFas5.chr16 158227 43 + 80997621 GTCACCGGCCAACAGCCTCACGCTCCTG--------------GCTCCACAGTGTCAC i macFas5.chr16 I 4 C 0 s papAnu2.chr16 152442 43 + 74645514 GTCACCGGCCAACAGCCTCATGCTCCTG--------------GCTCCACAGTGTCAC i papAnu2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 955663 23 - 1291538 GTCACTGG------------------------------GCAAACTTCACAGCG---- i calJac3.chrUn_GL286409 I 4 C 0 s canFam3.chr9 15710619 57 - 61074082 gcaagtgggaaacagccatacacccctcaacgggtcctgagagcttcacagcattat i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e chlSab2.chr16 150053 70 + 75148670 I e rheMac3.chr16 152372 70 + 80904711 I e ponAbe2.chr17 120007 1579 + 73212453 M a score=2000.000000 s hg38.chr17_GL383563v3_alt 260336 3 + 375691 CAT s panTro4.chr17 236764 3 + 82630442 CAT i panTro4.chr17 C 0 C 0 s macFas5.chr16 158270 3 + 80997621 CAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 152485 3 + 74645514 CAT i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15710676 3 - 61074082 cag i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e calJac3.chrUn_GL286409 955686 0 - 1291538 C e chlSab2.chr16 150053 70 + 75148670 I e rheMac3.chr16 152372 70 + 80904711 I e nomLeu3.chr19 240830 3 - 81552678 I e ponAbe2.chr17 120007 1579 + 73212453 M a score=19435.000000 s hg38.chr17_GL383563v3_alt 260339 87 + 375691 CCATGGCACAGAGAGGGCTGTTCATGAGCCTCACTCGACCGAAAAG-GGTGAAACTGCGCTCAAACGTCCTGTACAAGGAGGCCTGGA s panTro4.chr17 236767 87 + 82630442 CCATCGCACGGAGAGGGCTGTTCACGAGCCTCACTCGACCGAAAAG-GGTGAAACTGCGCTCAAACGTCCTGTACAAGGAGGCCTGGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 240833 87 - 81552678 CCATCGCACGGAGAGGGCTGTTCACGAGGCTCACTCGACCGAAAAG-GGTGAAACTGCGCTCAAACGTTGCGTACAAGGAGGCCTGGA i nomLeu3.chr19 I 3 T 90 s macFas5.chr16 158273 60 + 80997621 CCATCACACGGAGAGGGCTA-------------------------G-GGTGAAACTGCACCCAAACGTTCTGTCCAAGGAGGCCTG-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 152488 20 + 74645514 CCACCACACggagagggcta-------------------------------------------------------------------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 955686 4 - 1291538 ---------------------------------------------------------------------CTGT--------------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15710679 84 - 61074082 ttatcacacagaaagccacacttgtgatgctcagtcaagcaaaaagagatgaaaatgtgctcaaatgttccatgcaaggagacc---- i canFam3.chr9 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e chlSab2.chr16 150053 70 + 75148670 I e rheMac3.chr16 152372 70 + 80904711 I e ponAbe2.chr17 120007 1579 + 73212453 M a score=100.000000 s hg38.chr17_GL383563v3_alt 260426 1 + 375691 C s panTro4.chr17 236854 1 + 82630442 C i panTro4.chr17 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15710763 0 - 61074082 C e calJac3.chrUn_GL286409 955690 0 - 1291538 C e chlSab2.chr16 150053 70 + 75148670 I e papAnu2.chr16 152508 0 + 74645514 C e rheMac3.chr16 152372 70 + 80904711 I e macFas5.chr16 158333 0 + 80997621 C e nomLeu3.chr19 240920 90 - 81552678 T e ponAbe2.chr17 120007 1579 + 73212453 M a score=17104.000000 s hg38.chr17_GL383563v3_alt 260427 48 + 375691 CATCCATGGCACAGAGAGGGCTGTTCATGAG-CCTCACTCGACCGAAAC s panTro4.chr17 236855 49 + 82630442 CATCCATGGCACAGAGAGGGCTGTTCACCAGGCCTCACTCGACCGAAAA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 240830 48 - 81552678 CATCCATCGCACGGAGAGGGCTGTTCACGAG-GCTCACTCGACCGAAAA i nomLeu3.chr19 T 90 C 0 s calJac3.chrUn_GL286409 955690 47 - 1291538 CACCCATCGCACCAAGAGTGCTGCTCACGAG-GTTCCCTCAACCAAAA- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15710763 0 - 61074082 C e chlSab2.chr16 150053 70 + 75148670 I e papAnu2.chr16 152508 0 + 74645514 C e rheMac3.chr16 152372 70 + 80904711 I e macFas5.chr16 158333 0 + 80997621 C e ponAbe2.chr17 120007 1579 + 73212453 M a score=240616.000000 s hg38.chr17_GL383563v3_alt 260475 116 + 375691 GGGTGAAACTGCCCTCAAACGTTGCGTACAAGGAGGCCTGGAAAACGTACGCTGTGCTGTGGAGATGAACACTGAAGATGGCTGGTTT--AAACGTGTGGAGCttcaattc-acaaaca s panTro4.chr17 236904 116 + 82630442 GGGTGAAACTGCCCTCAAACGTTGCGTACAAGGAGGCCTGGAAAACGTACCCTGTGCTGTGGAGATGAACACTGAAGATGGCTGGTTT--AAACGTGTGGAGCTTCAATTC-ACAAACA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 240878 116 - 81552678 GGGTGAAACTGCGCTCAAACGTTGCGTACAAGGAGGCCTGGAAAACGTACGCTCTGCTGTGGAAATGAACACTGAAGATGGCTGGTTT--AAACGTGTGGAGCTTCAATTC-ACAAACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 152442 116 + 80904711 GGGTGAAACTGCACCCAAACGTTCTGTCCAAGGAGGCCTGGAAAACGTACGCTGTGCCATGGAAATGAACGCTGAAGATGGCTGGTTT--AAACATCTGGAGCTTCGATTC-ACAAACG i rheMac3.chr16 I 70 C 0 s macFas5.chr16 158333 76 + 80997621 ----------------------------------------GAAAACGTACGCTGTGCCATGGAAATGAACGCTGAAGATGGCTGGTTT--AAACATCTGGAGCTTCGATTC-ACAAACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 152508 116 + 74645514 gggtgaaactGCGCCCAAACGTTCTGTCCAAGGAGGCCTGGAAAACGTACGCTGTGCCGTGGAAATGAACGCTGAAGATGGCTGGTTT--AAACGTCTGGAGCTTCAATTC-ACAAACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 150123 116 + 75148670 GGGTGAAACTGCGCCCAAACGTTCTGTCCAAGGAGGCCTGGAAAACGTACGCTGTGCCGTGGAAATGAACACTGAAGATGGCTGGTTT--AAACGTCTGGAGCTTCAATTC-ACAAACG i chlSab2.chr16 I 70 C 0 s calJac3.chrUn_GL286409 955737 116 - 1291538 GGGTGCAATTGTGCTCAGGGGTTCTGTATAAGGAGGCCAGAAAAACACACACCATGCTGCAGAAATGAACCCTGAAGATGGTTAGTTC--CAGTGTTTAGAGCTACAGTTC-ATAAACG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15710763 80 - 61074082 ---------------------------------------agaagatgtccgctgtgctgtagaaatgaatattgaagatggctaattttaagatatttgatgcttcaaTTCAACAAACA i canFam3.chr9 C 0 I 264 e mm10.chr11 75883405 2885 + 122082543 I e ponAbe2.chr17 120007 1579 + 73212453 M a score=293778.000000 s hg38.chr17_GL383563v3_alt 260591 139 + 375691 tgttttctatactgtagggaaggcattattctaagaatgccgaaaacaaacaagacacggccctttgtcctcaaagagtgtcccattgaacggagtagTTTATCCATTAGCAAAACTCAGggccaggtgcggtggatcc s panTro4.chr17 237020 139 + 82630442 TGTTTTCTATACTGTAGGGAAGGCATTATTCTAAGAATGCCGAAAACAAACAAGACGCAGCCCTTTGTCCCCAAAGAGTGTCCCGTTCAACGGGGCAGTTTATCCACTAGCAAAACCCAGggccgggtgcggtggatcc i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 240994 138 - 81552678 TGTTTTCTATACTGTA-GGCAGGCATTATTCTAAGAATGCTGAAAACAAACAAAACACGGCCCTTTGTCCTCAAAGAGCGTCCCACTGAACGGAGTAGTTTATCAACTAGTGAAACTTAGggccaggtgcagtgggtca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 152558 139 + 80904711 TGTTTACTATACTGTAGGGAAGGCGTTATTCTAAGAACGCTGAGGACAAACGAGACACGGCCCTTGGTCCTCAAAGAGTGTCCCATGGAACGGAGTAGTTTATCAACTAGCAAAACTTAGggccaggtgcagtggacca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 158409 139 + 80997621 TGTTTACTATACTGTAGGGAAGGCGTTATTCTAAGAACGCTGAGGACAAACGAGACACGGCCCTTGGTCCTCAAAGAGTGTCCCATGGAACGGAGTAGTTTATCAACTAGCAAAACTTAGggccaggtgcagtggacca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 152624 139 + 74645514 TGTTTACTATACTGTAGGGAAGGCATTATTCTAAGAACGCTGAGGACAAACAAGACACGGCCCTTGGTCCTCAAAGAGTGTCCCATGGAACGGAGTCGTTTATCAACTAGCAAAacttagggccaggtgcagtggacca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 150239 139 + 75148670 TGTTTACTATACTGTCGGGAAGGCATTATTCTAAGAATGCTGAGGACAAACAAGACACGGCCCTTTGTCCTCAAAGAGTGTCCCATGGAACGGAGTAGTTTATCAACTAGCAAAACTTAGggccaggtgcagtggatca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 955853 137 - 1291538 TGTATTCCACACTGCATATAAGGCATTATTCTAGGAATTCTGAAAATGAACAAGCCACAGCCCTTTGTCCTC--AGAGTGTCCCATAGAAGGGAGTAGTTTATCAACCAGCAAAACTTAGggccaggcacggtggatca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15710843 264 - 61074082 I e ponAbe2.chr17 120007 1579 + 73212453 M a score=215472.000000 s hg38.chr17_GL383563v3_alt 260730 77 + 375691 tgcctgcaatcccagtgctttgggaggccgaggtggggggatttcttgaggccagaagttcaagaccagcctgggca s panTro4.chr17 237159 77 + 82630442 tgcctgcaatcccagtgctttgggaggccgaggtggggggatttcttgaggccagaagttcaagaccagcctgggca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 121609 76 + 73212453 Tgcctgtaatcccagtgctttgggaggccgggctgggaggattgcttgaggccagaagttcaagactagcct-ggca i ponAbe2.chr17 M 1579 C 0 s nomLeu3.chr19 241132 76 - 81552678 tgcctgtaatcccagtgctttgggaggccgaggtgggaggactgcttgaggccagaagttcaagaccagcct-ggca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 152697 77 + 80904711 cgcctgtaatcccagcgctttgggaggccgaggtgggaggattgcttgaggccagaagttcaagaccagcctgggca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 158548 77 + 80997621 cgcctgtaatcccagcgctttgggaggccgaggtgggaggattgcttgaggccagaagttcaagaccagcctgggca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 152763 77 + 74645514 cgcctgtgatcccagcactttgggaggccgaggtgggaggattgcttgaggccagaagttcaagaccagcctcggca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 150378 69 + 75148670 cgactgtaatcccagcgctttgggaggccgaggtgggaggactgcttgaggc--------caagaccagcctgggca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 955990 76 - 1291538 tgcct-taatcccagtgctttgggaggccaaggtgggaagattgcttgatgccagaagttcaagaccagcctgcaca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75883405 2885 + 122082543 I e canFam3.chr9 15710843 264 - 61074082 I a score=124155.000000 s hg38.chr17_GL383563v3_alt 260807 80 + 375691 acacaatgagactcccccacccc---ccatctcattttaaaaaataataaaaTAAAATAGCAATCTTTTATCTGGAAAATTAC s panTro4.chr17 237236 80 + 82630442 acacagtgagactcccccacccc---ccatctcattttaaaaaataataaaaTAAAATAGCAATCTTTTATCTGGAAAATTAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 121685 72 + 73212453 acacggtgagact--------cc---ctatgtcattttaaaaaataataaaataaaaTAGCAATCTTTTATCTGGAAAATTAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241208 72 - 81552678 acatagtgagact--------cc---gtctgtcatcttaaaaaataataaaaTAAAATAGCAATCTTTTATCTGGAAAATTAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 152774 69 + 80904711 acatagtgagcccccgccccGCCCGACCATCTCATGT--------------AAAAAATAACCATCTTCTGTCTGGAAAATTAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 158625 69 + 80997621 acatagtgagcccccgccccGCCCGACCATCTCATGT--------------AAAAAATAACCATCTTCTGTCTGGAAAATTAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 152840 69 + 74645514 acatagtgagcccccgCCCCGCCCGACCATCTCATGT--------------AAAAAATAGCCATCTTCTGTCTGGAAAATTAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 150447 69 + 75148670 acatagtgaggccccaccccGCCCGACCATCTCATGT--------------AAAAAATAGCAATCTTTTATCTGGAAAATTAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 956066 70 - 1291538 acatagtgagac---------cc---ccatcttattt-caaaagtaataaaaTAAAATGGCAAACTTTCATCTGGAAAATGAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15711107 63 - 61074082 ACTCAGTGAGGTCCCA-----CTGAACGGAGGAGTTT--------------ATGAACTGACAAAACTC-ATCGAGGAAAGGAC i canFam3.chr9 I 264 C 0 e mm10.chr11 75883405 2885 + 122082543 I a score=174901.000000 s hg38.chr17_GL383563v3_alt 260887 50 + 375691 TTTCCTGAGAGTTCCAGTGAGTTGA----AATCGGCAGGTGAGCTGGTTTCTCA s panTro4.chr17 237316 50 + 82630442 TTTCCTGAGAGTTCCAGTGAGTTGA----AATCGGCAGGTGAGCTGGTTTCTCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 121757 50 + 73212453 TTTCCTGAGAGTTCCAGTGAGTTCA----AATTGGCAGGTGAGCTGGTTTCTCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241280 50 - 81552678 TTTCCTGAGAGTTCCAGTGACTTGA----AATTGGCAGGTGAGCTGGTTTCTCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 152843 50 + 80904711 TTTCCTGAGAGTTCCAGTGAATTGA----AATTGGCAGGTGAGCTGGTTTCTCA i rheMac3.chr16 C 0 I 266 s macFas5.chr16 158694 50 + 80997621 TTTCCTGAGAGTTCCAGTGAATTGA----AATTGGCAGGTGAGCTGGTTTCTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 152909 50 + 74645514 TTTCCTGAGAGTTCCAGTGAATTGA----AATTGGCAGGTGAGCTGGTTTCTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 150516 50 + 75148670 TTTCCTGAGAGTTCCAGTGAATTGA----AATTGGCAGGTGAGCTGGTTTCTCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 956136 50 - 1291538 TTTCCTGAGCGTTCCAGTGCATTGG----AATTGACAGGCGAGCCGGCTTCTCG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75886290 48 + 122082543 TTTCCTAAAAGGTCCAATGCATTGA----AGCTGATGGGTGAGACTTTTTCC-- i mm10.chr11 I 2885 C 0 s canFam3.chr9 15711170 52 - 61074082 TTTCCTAAGAGTTCCCATCATCTCAGGGTAATCTGGAGGAGAGATGCCATCG-- i canFam3.chr9 C 0 C 0 a score=44977.000000 s hg38.chr17_GL383563v3_alt 260937 22 + 375691 TTGGGAACCGCGCTGCAGACGG s panTro4.chr17 237366 22 + 82630442 CTGGGAACCGCGCTGCAGACGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 121807 22 + 73212453 TTAGGAACCGTGCTGCAGACGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241330 22 - 81552678 TTAGGAACCGAGCTGCAGACGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 158744 22 + 80997621 GGAGGAACCCTGCCGCAGACGA i macFas5.chr16 C 0 I 262 s papAnu2.chr16 152959 22 + 74645514 GGAAGAACCCTGCCGCGGACGA i papAnu2.chr16 C 0 I 52 s chlSab2.chr16 150566 22 + 75148670 GGAGGAACCCTGCTGCGGATGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 956186 22 - 1291538 TCGGGAACCGTGCTACAGATGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75886338 22 + 122082543 ATAGGAGCTATGCTACAGGTGA i mm10.chr11 C 0 C 0 s canFam3.chr9 15711222 21 - 61074082 TGAGGACCAATGCTGCTG-TGA i canFam3.chr9 C 0 C 0 e rheMac3.chr16 152893 266 + 80904711 I a score=1269287.000000 s hg38.chr17_GL383563v3_alt 260959 442 + 375691 TGCTTACAGAGGGGTCATCCCCCT---------------------------------------------------------------------------------------------------GCCCCGATAAAATAGGATAA-GAAATAGCTACGTCTGAATGG------CCTCGGTGCATGCACAAAGCAGCATAATGA----GAGCCTCCACGTGTGTGTTTCATGCCACACAATGTGCTCCTGATGCCAGAAACCAAATCTTCAAAAGGGAAAATCTTACTAGGT--TTA--GGGGAGAGCTTTG-CAGCAACAAAGACGATGATGATGTAAATAG-AAAAGTGACG-AAATGACAACGAAGCTGTGT------------GGGGCAATATTCACCATAAGCTGTTAAGTTAAAAAAAGCACGTTGGAAACAGTCTGCATA----GCAG--GGCGCTCCACCACGTAAATATGTAGATGTGCCTACATCTATGGAGGAGTCTATATATACACAGAGGACAATCTAGAAAGATATCAGCCCAAATGGAAATCAAACTGTGCAAAGTCAAAATCTA s panTro4.chr17 237388 442 + 82630442 TGCTTACAGAGGGGTCATCCCCCT---------------------------------------------------------------------------------------------------GCCCCGATAAAATAGGATAA-GAAATAGCTACGTCTGAATGG------CCTCGGTGCATGCACAAAGCAGCATAATGA----GAGCCTCCACGTGTGTGTTTCATGCCACACAATGTGCTCCTGATGCCAGAAACCAAATCTTCAAAAGGGAAAATCTTACTAGGT--TTA--GGGGAGAGCTTTG-CAGCAACAAAGACAATGATGATGTAAATAG-AAAAGTGACG-AAATGACGAAGAAGCTGTGT------------GGGGCAATATTCACCATAAGCTGTTAAGTTAAAAAAAGCACGTTGGAAACAGTCTGCGTA----GCAG--GGCGCTCCACCACGTAAATATGTAGATGTGCCTACATCTATGGAGGAGTCTATATATACACAGAGAACGATCTAGAAAGATATCAACCCAAATGGAAATCAAACTGTGCAAAGTCAAAATCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 121829 439 + 73212453 TGCTTACAGAGGGGTCATCCCCCT---------------------------------------------------------------------------------------------------GCCCGGATAAAATAGGATAA-GAAATAGCTACGTCTGAATGG------CCTTGGTG--TGCACAAAGCAGCATGATGA----GAGCCTCCACGTGTGTGTTTCATGCCACACAATGTTCTCCTGATGCTAGAAATCAAATCTTCAAAAGGGAAAAT-TTACTAGGT--TTA--GGGGAAAGCTTTG-CAGCGACAAAGACGATGATGATGTAAATAG-AAAAGTGTCG-AAATGACGACGAAGCTGTGT------------GGGGCAATATTCACCATAAGTTGTTAAGTTAAAAAAAGCACGTTGGAAACAGTCTGCATA----GCAG--GGCGCTCCACCACGTAGATATGTAGATGTGCCTATATCTATGGAGGAGTCTATATATACACAGAGAACTATCTAGAAAGATATCAGCCCAAATGGAAATCAAACTGTGCAAAGTCAAAATCTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241352 441 - 81552678 TGCTTACAAAGCGGTCATGCCCCT---------------------------------------------------------------------------------------------------GCCCCAGTGAAACAGGATAA-GAAATAGCTACGTCTGAATGG------CCTCGGTGCACACACAAAGCAGCACAATGA----GAGCCTCCACATGTGTGTTTCATGCCACACAATGTGCTCCTGATGCTAGAAATCAAATCTTCAAAAGGCAAAATCTTACTAGGT--TTA--GGGGAAAGCTTTG-CAGCAACAAAGACGATGATGATGTAAATAG-AAAAGTGACG-AAATGACGACGAAGCTCTGT------------GGGGCAATATTCACCATAAGTTGTTAAGTTAAAAAAAGCACGTTGGAAACAGTCTGCATA----GCAG--GGCGCTCCACCACATAAATATGTAGATGTGCCTGTATCTGTGGAGGAGTCTATATATACACAGAGAACTCTCTAGAAAGATATCAGCCCAAATGGAAATCAAACTGTGCAAAGTC-AAATCTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 153159 443 + 80904711 TGCTTCCAGAGGGGTCATCCCCCT---------------------------------------------------------------------------------------------------GCCGCGATAAAACAGGGAAA-GAAATAGCTACGTCTGAACGG------CCTCGGTGCACGCACAAAGCAACATGACGAGG--GAGCCTCCACGGGTGTGGTTCACACCACACAATGTCCTCCTGACGCTAGAAATCAAACCTTCAAAAGGGAAAATCTTACTAGGT--TTA--GGGGAAGGCTATG-CAGCGATAAAGACAATGATGATGTAAATAGAAAAAGTGGCGAAAATGATGACGAAGCTGTAT------------GGGGCAATATTCACCAGAA---ATTAAGTTAAAAAAAGCACGTTGGAAACAGTCTGCATG----GCAG--GGCCATCCACCACATAAATATGTAGATACGTCCATATCTACAGAGGCGTCTATATATACACAGGGAACTATCTAGAAGGATATCAGCCCAAATGGAAATCCAACTGTGCAAAGTCAAAATCTA i rheMac3.chr16 I 266 C 0 s macFas5.chr16 159028 443 + 80997621 TGCTTCCAGAGGGGTCATCCCCCT---------------------------------------------------------------------------------------------------GCCGCGATAAAACAGGGAAA-GAAATAGCTACGTCTGAACGG------CCTCGGTGCACGCACAAAGCAGCATGACGAGG--GAGCCTCCACGGGTGTGGTTCACACCACACAATGTCCTCCTGACGCTAGAAATCAAACCTTCAAAAGGGAAAATCTTACTGGGT--TTA--GGGGAAGGCTATG-CAGCGATAAAGACAATGATGATGTAAATAGAAAAAGTGGCGAAAATGATGACGAAGCTGTAT------------GGGGCAATATTCACCAGAA---ATTAAGTTAAAAAAAGCACGTTGGAAACAGTCTGCATG----GCAG--GGCCATCCACCACATAAATATGTAGATACGTCCATATCTACAGAGGCGTCTATATATACACAGGGAACTATCTAGAAGGATATCAGCCCAAATGGAAATCCAACTGTGCAAAGTCAAAATCTA i macFas5.chr16 I 262 C 0 s papAnu2.chr16 153033 494 + 74645514 TGCTTCCAGAGGGGTCATCCCCCTGCCCCGATAAAACAGGGAAA------------------------------------------------GAAATAGCTGCTTCCAGAGGGGTCAGCCCCTGCCGCGATAAAACAGGGAAA-GAAATAGCTACGTTTGAACGA------CCTCGGTGCACGCACAAAGCAGCATGACGAGG--GAGCCGCCACGTGTGTGGTTCACACCACACAATGTCCTCCTGATGCTAGAAATCAAACCTTCAAAAGGGAAAATCTTACTGGGT--TTA--GGGGAAGGCTATG-AAGCGATAAAGACAATGATGATGTAAATAGAAAAAGTGGCGAAAATGATGACGAAGCTGTAT------------GGGGCAATATTCACcagaa---attaagttaaaaaaagcaCGTTGGAAACAGTCTGCATG----GCAG--GGCCATCCACCACATAAATATGTAGATACGTCCGTATCTACAGAGGCgtctatatatacacagagaACTATCTAGAAGGATATCAGCCCAAATGGAAATCCAACTGTGCAAAgtcaaaatcta i papAnu2.chr16 I 52 C 0 s chlSab2.chr16 150588 540 + 75148670 CGCTTCCAGAGGGGTTATCCCCCTGCCACGATAAAGCAGGGAAAGAAATAGCTGCTTCCAGACAGGTCATCCCCCTGCCGCGATAAAACAGGGAAATAGCTGCTTCTAGAGGGGTTATCCCCTGCCGCGATAAAACAGGGAAA-GAAATAGCTACGTTTGAACGG------CCTCGGTGCACGCACAAAACAGCATTACGAGG--GAGCCTCCATGTGTGTGGTTCACACCACACAATGTCCTCCTGATGCTAGAAATCAAACCTTCAAAAGGGAAAATCTTACTGGGT--TTA--GGGGAAGGCTATG-CAGCGAT--AGACAATGATGATGTAAATAGAAAAAGTGGCGAAAATGATGATGAAGCTCTAT------------GGGGCAATAGTCACCAGAA---ATTAAGTTTAAAAAAGCACGTTGGAAACAGTCTGCATG----GCAG--GGCCATCCACCACATAAACATGTGGATACGTCCATATCTACAGAGGCGTCTATATATACACAGAGAACTATCTAGAAGGAGATCAGCCCAAATGGAAATCCAACTGTGCAAAGTCAAAACCTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 956208 438 - 1291538 TGTTTACAGAGAGATCGTCCCCAG---------------------------------------------------------------------------------------------------ACCCCGATAACACAGGGAAA-GACACAGCGATGTCTGAGTGGCCACAACCGCGGTGCATG---ACAGCTGCACCAAGGGA--GAGCCTCCAAGCATGT--TCTGTGCCCCAAAATATGCTCCTGATGCTAGAAATCAAACCTGCGAGAGGGAAAACCTTACTGGGC--TTA--GGGGAAAGCTATG-CAGC-ATAGAAACCAGGATGAC-CCAACAGAAAAAGTGACA-ACATAATGATGGAGC--GAA------------CAGGCAATACTCACTGTAAACTGTCACAATAAAAACAGCATGATGG-GACAGGCTGCCCA-----TAG--GGCACCCCACCACATAAACACACAGATATGCCTGTATCTACG--AGCATCTATATATACACAGAAAACAAACTAGAAGGATATCAGCCCAAACTGAAATCAAACTGGGCAAAGTCAAAATCTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75886360 444 + 122082543 CACCGATAGAGGGGCTGTCTGTCC---------------------------------------------------------------------------------------------------TCTGCAATGAAGCAGGGAAATGCAGAGGCTACA-CAGCACAG------TCTCAGCACATGCACAGGCC-----TATGAGGCAGGACCCCTGAGTGTCTGCTT-ATCCCACATGCTGGG--CCTGAGGCTTGGAAGCAAAGCCAC----GGCGAAATCACATCGTGCTGTGA--GGAAAAAGCTATACCAGCAATAAAAATGATGACAGCGTAAAGGGAAAAGGTGACAAAGATACCGGCGAAGCTGTACAGGTAACAAGA-GGGGGGATGGACACAATGC---GT----ATAAAAGCAATAGCTCGTAAACAGTCTGCATAATCTGAAGTCGGCAAGCTACCGTATAAATATGTATGTGCACGTA-ATGGATTCAGAAGTCTATCTACACATGGAGGATT-TCTGGGAAGGTATCAGCCAAAATGTAAATCAAA---TACTAAGTCAAAATCTA i mm10.chr11 C 0 I 296 s canFam3.chr9 15711243 449 - 61074082 TACTCACGGAGTGGCCTT---CCT---------------------------------------------------------------------------------------------------ATCCCCATGGAATGGGGGAA-GAAACGGCCCCACCCGAATCA------CTGTAGCACCTGTATGAAGCCACGTGAAGACC--AAGCCTGCAAGCATGCCCCTCAGATCACACAATGTGCTCCCAGGGCTAGAGATCAAATCCTCAACAACGAACAACCTGCT---T--TTGCTGGAGAAAGCTATG-CAGCAATAAAAATGCTGACAATGGAAACCAAAAGAGTGAAAACAATCACAGTGAAGCTGTATTTGTACTGAAATGGAGCAATACTCACAATAA---ATTAAATTTAAA--AGCATGTTATAAACAGCATGCATG----GTGT--GATTCTCCACCATATAAATATGTATAAGTGCCTGTATCTATTTAGAAATCAATACATGTACAGGAAAATATATGGAAGGATAGTGCCCCAAATGTAAATCACATTGTGCTAAGTCAAAATCTA i canFam3.chr9 C 0 C 0 a score=71800.000000 s hg38.chr17_GL383563v3_alt 261401 15 + 375691 TTTTAAATGGATAAG s panTro4.chr17 237830 15 + 82630442 TTTTAAATGGATAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 122268 15 + 73212453 TTTTAAATGGATAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241793 15 - 81552678 TTTTAAATGGATAAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 153602 15 + 80904711 TTTTAAATGGATAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 159471 15 + 80997621 TTTTAAATGGATAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 153527 15 + 74645514 ttttaaatggaTAAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 151128 15 + 75148670 TTTTAAATGGATAAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 956646 15 - 1291538 TTTTAAATGGATAAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75887100 15 + 122082543 TTTTAAATAAATAAG i mm10.chr11 I 296 I 218 s canFam3.chr9 15711692 15 - 61074082 TTTTAAATGGTTAAG i canFam3.chr9 C 0 C 0 a score=439120.000000 s hg38.chr17_GL383563v3_alt 261416 105 + 375691 CA-GAATTCCTATTTAAAGGAAGCTTATGCTAAATGCTTTGGAAAGTCACTTGCCCCAACTTCATTTTTTGACCAGGTCTGGATTTTTGCAGGTCAGGATGGATTA s panTro4.chr17 237845 105 + 82630442 CA-GAATTCCTATTTAAAGGAAGCTTATGCTAAATGCTTTGGAAAGTCATTTGCCCCAACTTCATTTTTTGACCAGGTCTGGATTTTTGCAGGTCAGGATGGATTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 122283 105 + 73212453 CA-GAATTCCTATTTAAAGGAAGCTTATGCTAAAAGCTTTGGAAAGTCACTTGCCCCGACTTCATTTTTTGACCAGGTCTGGATTTTTGCAGGTCAGGATGGATTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241808 105 - 81552678 CA-GAATTCCTATTTAAAGGAAGCTTATGCTAAATGCTTTGGAAAGTCACTTGCCCCAACTTCATTTTTTGACCAGGTCTGGATTTTTGCAGGTCAGGATGGATTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 153617 105 + 80904711 CA-GAATTCCTATTTAAAGGACGCTTATGCTAAATGCTTTGGAAAGTCACTTGCCCCAACTTCATTTTTTGACCAGGTCTGGATTTTTGCAGGTCAGGATGGATTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 159486 105 + 80997621 CA-GAATTCCTATTTAAAGGACGCTTATGCTAAATGCTTTGGAAAGTCACTTGCCCCAACTTCATTTTTTGACCAGGTCTGGATTTCTGCAGGTCAGGATGGATTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 153542 105 + 74645514 CA-GAATTCCTATTTAAAGGAAGCTTATGCTAAATGCTTTGGAGAGTCACTTGCCCCAACTTCATTTTTTGACCAGGTCTGGATTTTTGCAggtcaggatggatta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 151143 106 + 75148670 CAGGAATTCCTATTTAAAGGACGCTTATGCTAAATGCCTTGGAAAGTCACTTGCCCCAACTTCATTTTTTGACCAGGTCTGGATTTTTGCAGGTCAGGATGGATTA i chlSab2.chr16 C 0 T 14291 s calJac3.chrUn_GL286409 956661 105 - 1291538 CA-GAATTCCTATTTAAAGGACGCTTATGCTAACCACTTTGGGAAGTCACTTGCCCCAACTTCATTTTTTGACCAGGTTTGGATTTTTGCAGGTCGGGATGGATTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75887333 89 + 122082543 cA-GAATCCATATTTAAAAGAAGTCTACGCTGAACACTTTGGGAAAG-ACTTACCCT-------TTACTGGATTAGATCTGGACTTCTGCAGGCCAGG-------- i mm10.chr11 I 218 C 0 s canFam3.chr9 15711707 105 - 61074082 CA-GAATTCCTATTTAAAAGAAGCCTATGCTAAATGCTTTGGGAAATCACTCGCCCCAAGTTCATTTTCTGGCTGGATCTGGATTTTTGTGGGTCAGGAAGGATTA i canFam3.chr9 C 0 C 0 a score=83036.000000 s hg38.chr17_GL383563v3_alt 261521 55 + 375691 AAGCAGCTGAAAGTGTCCACGCAGACAGGCAGGAG--A-CAGCCACAGTGGCTGACTG s panTro4.chr17 237950 54 + 82630442 AAGCAGC-GAAAGTGTCCACGCAGACAGGCAGGAG--A-CAGCCACAGCGGCTGACTG i panTro4.chr17 C 0 M 1197 s ponAbe2.chr17 122388 32 + 73212453 AAGCAGCTGAAAGTGT--------------------------CCACAGTGGCTGCCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241913 55 - 81552678 AAGCAGCTGAAAGTGTCCATGCAGACAGGCAGGAG--A-CAGCCTCCATGGCTGACTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 153722 55 + 80904711 AAGAAGCTGAAAGTGTCCACGCAGACAGACAGGAG--A-CAGTCGCAGTGGCTGACCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 159591 55 + 80997621 AAGAAGCTGAAAGTGTCCACGCAGACAGACAGCAG--A-CAGTCGCAGTGGCTGACCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 153647 55 + 74645514 aagaagCTGAAAGTGTCCACGCAGACAGACAGGAG--A-CAGTCACAGTGGCTGACCG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 956766 57 - 1291538 AAGAAGCTGACGGTGCCCAGGCAGATGGGCAGGAGACA-CATACACCGTGGGTGACTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75887422 38 + 122082543 -------TGAAACTGACAGCACAT---GGCAGTGG--------GACACTGGTTTAC-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15711812 56 - 61074082 AAGAAACTGAAAGCACATGCATGAATAGGCAGGAG--ACCGGGCTTTTTGGCTGACTA i canFam3.chr9 C 0 C 0 e chlSab2.chr16 151249 14291 + 75148670 T a score=1547717.000000 s hg38.chr17_GL383563v3_alt 261576 874 + 375691 TGGCTCAATTGT----AATCAGGCCTGTGCACCCCCACAGCGGGTCCCAGATGGTGTCCCCGGGTCACCGG------CCCCTCCGATCATAAGCTCAGCCCTGCTCAGCCCCTGAAGTGCCATCCGCCAGGCTTGGAGAAGCATCACCTGCCCCAGTGGGCCAGCAGCGGAAAGGCTGGATACAGCTCTGTTGCTATAGACGCTGT--CTGGAA-CCCAGGCCCTGCTGCCAAATGACTTTAAACGTATAGACAGTTCAGATATTG------------------------------------------------------------------------------------------ATGTATATAATTACAAATATTTATATACtttctcgggtacttatgcttacactaggcaccaagct--agctgttttatgca---gaatctcatttaattttcaaaacagccctatggggtgggtatgactgttcctgttttac--acaagggatctgagacttgaggttaagcagctcgac-gtggggacctgggatgcgaaccctgttcagtctgagcctcggtcccgggctcctgctgccccaGCCGGGCCTGGCTGCCTGGCTAGCACACTCTTGCAGGCCCTCATCCTCCC--GCCTGGACCCAACTTCACCCTCCCCACCCCGAGGTAAGGCAAGGCTGGATCCCTGGGCCCT--CTCCTCTTCCAGAACGACAGATGAGGTCAAGCTTCAAGTGGGAG-GGGCACAGCCAGGCCCC----TCTTCCCATTCGTTAGGACACAGCCCGGG-GGCCAGCAGCGCTGGGAGCACGCCGAGCCCTGGACCTTACCCCGACTACCCACAAATACCAAGTCACAGA-AGGCCCCAAGGAGGCACAGCCTT---AATGCCAGCCACCTGCTGCCGGGTCTGAGACAGAAGCCAGAGG-CAAGTGGAGAAACATTTCAGGAGGAAGGCAAGTCTCCCTGGACTTCC s ponAbe2.chr17 122420 871 + 73212453 TGGCTCAAGTGT----AATCCGGTCTGCGCACCCCCAGAGCGGGTCCCAGATGGTGTCCCCGGGTCACCAG------CCCCTCCGATCATAAGCTCAGCCCTGCTCAGCCCCTGAAGTGCCATCCGCCAGGCTTGGAGAAGCATCACCTGCCCCAGTGGGCCAGCAGCAGAAAGGCTGGATACAGCTCTGTTGCTATAGACGCTGT--CTGGAA-CCCAGGCCCTGCTGCCAAATGACTTTAAACATATATACAGTTCAGATATTG------------------------------------------------------------------------------------------ACGtatataattataaatatttatataCtttctcgggtacttatgcttacaccaggcaccaagct--agctgttttatgta---gaatctcatttaattttc-acacagccctatggggtgggtatgactgttcctgttttac--ac-agggatctgaggcttgagg-taagcaact-gac-gcgggga-ctaggatgcgaaccttgttctgtctgagcctcggacctgggctcctgctgccccaGCCGGGCCTGGCTGCCTGGCTAGCACACTCTGGCAGGCCCTCATCCTCCC--GCCTGGACCCAACTTCACACTCCCCACCCCGAGGTAAGGCAGGGCTGGCTCCCTGGGCCCTGGCTCCTCTTCCAGAACAACAGATGAGGTCAAGCCTCAAGTGGGAG-GGGCACAGCCAGGCCCC----TCTTCCCATTCGTTAGGACACAGCCCGGG-GGCTAGCAGTGCTGGGAGCACGCAGAGCCCTGGACCTTACCCTAACTACCCACAAATACCAAGTCACAGA-AGGCCCCAACGAGGCACAGCCTT---AACGCCAGCCACCTGCTACTGGGTCTGAGACAGAAGCCAGAGG-CAAATGGAGAAGCATTTCAGGAGGAAGGCAAGTCTCCCTGGACTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 241968 787 - 81552678 TGGCTCAAGTGT----AATCAGGCCTGTGCA-CCCCACAGCAGGTCCCAGATGGTGTCCCCGGGTCACCGG------CCCCTCCGATCATAAGCTCAGCCCTGCTCAGCCCCTGAAGTGGCATCTGCCAGGCTTGGAGAAACATCACCTGCCCCAGTGGGCCAGCAGTGGAAAGGCTGGATACAGCTCTGTTGCTACAGACGCTGT--CTGGAA-CCCAGGCCCTGCTGCCAAATGACTTTAAACGTATACACAGTTCAGATATTG------------------------------------------------------------------------------------------ATGTATataattataaatatttatatactgtctcgggtacttatgcttacaccaggcaccaagct--agctgtttcatgca---gaatctcatttaattttcacaacagcccta-ggggtgggtatgactgttcctgttttac--acaagggatctgaggcttgaggttaagcaactcgac-acggggacctgggatgcgaacgctgttctgtctgagcctcggacctgggctcctgctgccctagctgggcctGGC-----------------------------------------------------------------------------------------TCCCTGGGCCCTGGCTCCTCTTCCAGAACGACAGATGAGGTCAAGCTTCAAGTGGGAG-GGGCGCAGCCAGGCCCC----TCTTCCCATTCGTTAGGACACAGCCCGGG-GGCCGGCAGCACTGGGGACATGCCGAGCCCTGGACCTTACCCTGACTACCCACAAATACCGAGTCACAGA-AGGCCCCAACGAGGCACAGCCTT---AATGCCAGCCACCTGCTGCTGGGTCTGAGACAGAAGCCAGAGG-CAAGTGGAGAAACATTTCAGGAAGATGGCAAGTCTCCCTGGACTTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 153777 837 + 80904711 TGGCCCAAGTGC----AATCAGGCCTGTGCACCCCCATGGCGGGTCCCAGATGCTG-CCCTGGCTCACTGG------CCCCTCCGATCATAAGCTCAGCCCTGCTCAGCCCCTGAAGCGCCATCCACCAGGCTTGGAGAAGCATCACCTGCCCCAGTGGGCCGGCCGTGGAAAGGCTGGATACGGCTCTGTTGCTGTAGATGCTGT--CTGGAA-CCCAGGCCCTGCTGCCAAATGACTTTAAATGTATATACAGTTCAGATATTG------------------------------------------------------------------------------------------ATGtatataattataaatatttatataCtttcttgggtacttatgcttacaccaggcaccaagct--cgctgtttgacgca---gaatctcatttaattttcaccacagccctccgaggtgggtgtgactgttcctgtgtgac--acaagggatctgaggcttgaggttaagcaactggac-gtggggacctgggatgtgaaccctgttctgtctgagcctccaaactgggctcctgctaTCCCAGCCGGGCCTGGTTGCATGGCTAG------------------CATCCTCCT--GCCTGGACCCCACTTCACCGTCCCCACCCTGAGGGAAGGCAGGGCTGGCTCCCTGGGCCCTGGCTCCTCTTCCAGAATGACAGATGAGGTCAAGCCTCAAGTGGGAG-GGGCACAGCCAGGCCCC----TCTTCCCATTCCTCAGGACACAGCCGGGG-GGC---------------CACGCCCAGCTCTCGACCTTGCCCTGACCACCCACAAATACCAAGTCACAGA-AGGCCCCAAAGAG-----GCCTT---AATGGCAGCCACCTGCTGCTTGGTCTGAGACAGAAGCCAGAGG-CAAGTGGAGAAACATTTGAGGAGGAAGGCGAGTCTCTCTGGGTTTCC i rheMac3.chr16 C 0 I 83 s macFas5.chr16 159646 837 + 80997621 TGGCCCAAGTGC----AGTCAGGCCTGTGCACCCCCATGGCGGGTCCCAGATGCTG-CCCTGGCTCACCGG------CCCCTCCGATCATAAGCTCAGCCCTGCTCAGCCCCTGAAGCGCCATCCACCAGGCTTGGAGAAGCATCACCTGCCCCAGTGGGCCGGCCGTGGAAAGGCTGGATACGGCTCTGTTGCTGTAGATGCTGT--CTGGAA-CCCAGGCCCTGCTGCCAAATGACTTTAAATGTATATACAGTTCAGATATTG------------------------------------------------------------------------------------------ATGTATataattataaatatttatatactttcttgggtacttatgcttacaccaggcaccaagct--cgctgtttgacgca---gaatctcatttaattttcaccacagccctccgaggtgggtgtgactgttcctgtgtgac--acaagggatctgaggcttgaggttaagcaactggac-gcggggacctgggatgtgaaccctgttctgtctgagcctccaaactgggctcctgctaccccaGCCGGGCCTGGTTGCCTGGCTAG------------------CATCCTCCT--GCCTGGACCCCACTTCACCGTCCCCACCCTGAGGGAAGGCAGGGCTGGCTCCCTGGGCCCTGGCTCCTCTTCCAGAATGACAGATGAGGTCAAGCCTCAAGTGGGAG-GGGCACAGCCAGGCCCC----TCTTCCCATTCCTCAGGACACAGCCGGGG-GGC---------------CACGCCCAGCTCTCGACCTTGCCCTGACCACCCACAAATACCAAGTCACAGA-AGGCCCCAAAGAG-----GCCTT---AATGGCAGCCACCTGCTGCTTGGTCTGAGACAGAAGCCAGAGG-CAAGTGGAGAAACATTTGAGGAGGAAGGCGAGTCTCTCTGGGTTTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 153702 842 + 74645514 TGGCCCAAGTGT----AATCAGGCCTGTGCACCCCCACAGCGGGTCCCAGATGCTG-CCCTGGCTCACCGG------CCCCTCCGATCATAAGCTCAGCCCTGCTCAGCCCCTGAAGCACCATCCACCAGGCTTGGAGAAGCATCACCTGCCCCAGTGGGCCGGCCGTGGAAAGGCTGGATATGGCTCTGTTGCTGTAGACGCTGT--CTGGAA-CCCAGGCCCTGCTGCCAAATGACTTTAAATGTATATACAGTTCAGATATTg------------------------------------------------------------------------------------------atgtatataattataaatatttatacacttTCTTGGGTACTTATGCTTACACCAGGCACCAAGCT--CGCTGTTTGACGCA---GAATCTCAGTtaattttcaccacagccctccgaGGTGGGTGTGACTGTTCCTGTGTGAC--ACAAGGGATCTGAGGCTTGAGGTTAAGCAACTGGAC-GCGGGGACCTGGGATGCGAACCCTGTTCTGTCTGAGCCTCAGACCTGGGCTCCTGCTACCCCAGCCGGGCCTGGTTGCCTGGCTAG------------------CATCCTCCT--GCCTGGACCCCACTTCACTGTCCCCACCCTGAGGGAAGGCAGGGCTGGCTCCCTGGGCCCTGGCTCCTCTTCCAGAATGACAGATGAGGTCAAGCCTCAAGTGGGAG-GGGCACAGCCAGGCCCC----TCTTCCCATTCCTCAGGACACAGCCGGGG-GGC---------------CACGCCGAGCTCTCGATCTTGCCCTGACCACCCACAAATACCAAGTCACAGA-AGGCCCCAAAGAGGCACAGCCTT---AATGGCAGCCACCTGCTGCTTGGTCCGAGACAGAAGCCAGAGG-CAAGCGGAGAAACATTTGAGGAGGAAGACGAGTCTCTCTGGGTTACC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 956823 912 - 1291538 TGGCTCAGCTGT----CATCAGGCCTTTGCA-CCCCTCAGTGGGTCCCAGACGGTCCACCTGGGTCACCAG------CCCCTCCGATCGTAAGCTCAGCCCTGCTTGG-CACTGAAGCGCCACCAGCCAGCCTTAGAGAAGCATTACCTGCCCCAGTGGGCCAGCAGCAGAAAGGCTGGATACAACTCTGTTGCCATAGAC-CCGT--CTGGAA-CCCAGGCCCTGCGGCCAAATGACTTTAAATGTATATACAATTCAGATATTGCtatatatatgtgtatatatatatatatatatatgtatatatatgtgtatatatgtgtatatatatatacatatatgtatgtgtgtatatatatatataattataaatatgtatataCTTTCTCAGGTatttatgcttacaccaggcaccaagct--agctgctttatgca---gaatttcatttaattttcacagtggccctataaggtgggtatgactgtccctgttttacgagcaagggctctgaggcttgagtttaagtaacctgAC-GCGGGGACCGGGGATGTGAATCCTGTTCAGTCTGAGCTTCGGACCTGGGCTCCTGCTGCCCCAACCAAGCCTAGTTGCCTGGCCAGCACAATCTCGCAAACCT-CATCCTCCT--GCCTGGACCCAACTTCACCCTCCCCACCC-ACGGTAAGGCAGGGCTGGCTCCCTGGGCCCTGGCTCTGCTTTCAGAACAACAGATGAGGTCAAGCCTCAAGTGGGAGAAGGCACAGCCAGTCCCC----TCTTCCCGTACATTAGGACACAG-----------------------------------------------CTTGACCACCTGCAAACACCCAATCACAGA-AGGCCCC------CCACAGCCTT---CATGCCAGCCACCTGCTGCTTGGGATGACGCAGAAGCCAGAGG-CAACGGGAGAAGCATTTCAGGAGGAAGGCACGTCTCTCTGTGCTTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75887460 765 + 122082543 -AGATCAACTG-------------------------------GGTGAGATGAGGAGTCACTGGGTCACCAA------ACCCACTGACCACAGGCTCAGCCTTGCTTGATCCCTAAGACATTACCAGCTGTGCCTGCAGCTGTGCCACCTGCCCTGTTAGGC-------AGAAGAACCGAGAACAGTCTTGTTGCCATAGATTCAGTA-CTGGGACCCCAGGCTCCACTGCCAAGCAAATTAA----TACATACAGTTCAGATATTG------------------------------------------------------------------------------------------ATGTACGT-GTTATAAATATTTAAACAGTTTATGTGGTGCTAATAC-TGTACCAGGCACCAAAGG--CACTGCTTTATGGAGACGAATCTCGGT---------------------GAAGTAGGGATTTGGGATCCTATCTTATGAATAAGAGATCTG-------------GATAACTTGGC-CATGGGAGCTAGAGTGTGAGCCTTGTTCTGTCAGAAACACAGACGTTGGTTTTGGCTGCAGCTGACAGAACTATT----TGGGAAAAGCACT------------TATTTTTTTTAACATGGACCCAATTTCACCCTCTCCACCCAGTGTGATGGCAGGGATGGGTCCCTGGACCCT-ACACTTCATCCAGAGGTCCAAACAAGGTGGAGCCTCACAAGGGAGAGGGCACAGCCTAGCCCTG---CCTTCCCAAGCATTAGGACATAGCCCAGGCAGCCAGCAAGCCCAAAGAACCCTTAGGTTCTAGTTGTTATCCTGACCACATTCAAATACT--GTCACAAACAGGCTCCCAAAGGACACAGTCAT---CA-------------CTGCTTGGCCTAAGACAGAAGCTAGGAG-GCAGCTGAGCTGCCCTACAGAAGGA-----------------CTTCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15711868 797 - 61074082 TGGCTCAAATGTCAACAGTCAGCCTTG-----TCCCCCAGCCTCTCCCAGATGGTGTCACTGAGTCACTGACCACCCCCCTCCCCATCACAGGCTCAGCACTGCTCAACCCTGGAGG----------CAGGTTAGGAGGTGCTTCACCTGCCCCAG-GGGCCAGGAATGCAGGGGCTGGGGATGGACTTGTGGCCACACATTCAGTATCTGGAA-CCCAGGTCCTGCTGTCAAAGGACCTCAGAT--------AGCTGAGATACTG------------------------------------------------------------------------------------------AGGTACAT-ATTATAAATATTTAtacactttactgagcacttatgc-tacaccagacaccaaactacaagtgttttatgta---gaatcttact-aatttttataataa-cctagaaggtgggcattactttccctgtttcatatatgagggatctgaggcttgagggttagtaacttgacaaaggggagctgggatgtgaacctcaagctatttgggccccagg----------------------------tagctgcttaaGCAGA-----------------TACTCACCCAAGCCTTCACCCCAC--CCTCGCCCCCACAC-------AAGCAGAGCTGGCCCCTC----------------TCCGGGGCTGCAGACTAGGTCAAGCCTAAAGTGGGAGAGGACACAGCCTGGCGCTGTGTCCTTCCCATTCAGTGGGACACAGCCTGGG-GGCCAGTGGGGCTGAAGGCACACTGACTT-------TAGCTCTGACCACCTACAAACATGGAGTCACTGG-GG--CCCAAAGACATGCAGCCTTGACAATGCCAGCCTTCTGCTGCTCCTTCAGAGACAGAAGCCAGAAGACAACAGGAGAAGAATTTCGGAGGGAAGTCAACTCTCTCCGTGCTCCC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 151249 14291 + 75148670 T e panTro4.chr17 238004 1197 + 82630442 M a score=-5689.000000 s hg38.chr17_GL383563v3_alt 262450 5 + 375691 ----------------------CACCC s ponAbe2.chr17 123291 5 + 73212453 ----------------------CACCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 242755 5 - 81552678 ----------------------CACCT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 160483 5 + 80997621 ----------------------TACGC i macFas5.chr16 C 0 I 66 s papAnu2.chr16 154544 5 + 74645514 ----------------------TACCC i papAnu2.chr16 C 0 I 189 s calJac3.chrUn_GL286409 957735 3 - 1291538 -----------------------ACC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75888225 5 + 122082543 ----------------------CTCCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15712665 26 - 61074082 CCCATATGCCCAGCCCAGGAAACACC- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 151249 14291 + 75148670 T e rheMac3.chr16 154614 83 + 80904711 I e panTro4.chr17 238004 1197 + 82630442 M a score=598.000000 s hg38.chr17_GL383563v3_alt 262455 4 + 375691 CACG-- s ponAbe2.chr17 123296 4 + 73212453 CACG-- i ponAbe2.chr17 C 0 I 23 s nomLeu3.chr19 242760 4 - 81552678 CACG-- i nomLeu3.chr19 C 0 I 23 s macFas5.chr16 160554 4 + 80997621 CACA-- i macFas5.chr16 I 66 I 8 s calJac3.chrUn_GL286409 957738 4 - 1291538 CATG-- i calJac3.chrUn_GL286409 C 0 I 22 s canFam3.chr9 15712691 4 - 61074082 --TGCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75888230 0 + 122082543 C e chlSab2.chr16 151249 14291 + 75148670 T e papAnu2.chr16 154549 189 + 74645514 I e rheMac3.chr16 154614 83 + 80904711 I e panTro4.chr17 238004 1197 + 82630442 M a score=1694.000000 s hg38.chr17_GL383563v3_alt 262459 1 + 375691 T s ponAbe2.chr17 123323 1 + 73212453 T i ponAbe2.chr17 I 23 C 0 s nomLeu3.chr19 242787 1 - 81552678 T i nomLeu3.chr19 I 23 C 0 s rheMac3.chr16 154697 1 + 80904711 T i rheMac3.chr16 I 83 C 0 s macFas5.chr16 160566 1 + 80997621 T i macFas5.chr16 I 8 C 0 s papAnu2.chr16 154738 1 + 74645514 T i papAnu2.chr16 I 189 C 0 s calJac3.chrUn_GL286409 957764 1 - 1291538 T i calJac3.chrUn_GL286409 I 22 C 0 s canFam3.chr9 15712695 1 - 61074082 C i canFam3.chr9 C 0 C 0 e mm10.chr11 75888230 0 + 122082543 C e chlSab2.chr16 151249 14291 + 75148670 T e panTro4.chr17 238004 1197 + 82630442 M a score=827466.000000 s hg38.chr17_GL383563v3_alt 262460 347 + 375691 CCTCCATCCTGGCTGCTGGCGGCTCCCAGGGGAACCAGCCACTCAGGGCCGAGCCGCCTCTCTTTACCAAGGCTTCCG-----------------------GCAGGCCCTTCCCCTCCATCGGAAGAGCCTCTGACATGGCCTGGGGACCACCTGCGAGCCTCAGGCCTGTGCCAGCCCCCAGCCACCTC----TCCCAGTTGAAAGCAAGCACCATCATTTCCTGTGGCTTTCAAGCTCGGCTTCCAAAACACCAAACACCTCCT-----CCCTCCGCCTGCCACTCATGC--AGTTACCACTGCGTCCCGAGTGGAGAGGAGGG-TTAAAAAAGGCAACAGCATCAGCTGTTGACTATTAACATTCACAGAGCACATAAT s ponAbe2.chr17 123324 370 + 73212453 CCTCCATCCTGGCTGCTGGCAGCTCCCAGGGGAACCGGCCACACAGGGCCGAGCCGCCTCTCTTTACCAAGGCTTCCGGCAGGCTGCAGCACCACCACCGAGCAGGCCCTTCCGCTCCATCAGAAGAGCCTCTGACATGGCCTGGGGACCACCTGCAAGCCCCAGGCCTGTGCCAGCCCCCAGCCACCTC----TCCCAGTTGAAAGCAAGCACCATCATTTCCTGTCGCTTTCAAGCTCAGCTTCCAAGACACCAAACACCTCCT-----CCCTCTGCCTGCCACTCATGC--AGTTACCACTGCGTCCGGAGTGGAGAGGAGGG-TTAAAAAAGGCAACAGCATCAGCTGTTGACTATTAACATTCACAGAGCACATAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 242788 337 - 81552678 CCTCCATC-------CTGGCGGCTCCCAGGGGAACCGGCCACACAGGGCCGAGCCGCCTCTCTTTACCAAGGCTTCCA-----------------------GCAGG--CTTCCCCTCCATCGGAAGAGCCTCTGACATGGCCTGGGGACCACCTGCAAGCCCCAGGCCTGTGCCAGCCCCCAGCCACCTC----TCCCAGTTGAAAGTGAGCACCATCATTTCCTGTCGCTTTGAAGCTCGCCTTCCGAAACACCAAACACCTCCT-----CCCTCCGCCTGCCGCTCATGC--AGTCACCACTGCA-CCCGAGTGGAGAGGAGGG-TTAAAAAAGGCAACAGCCTCAGCTGTCAACTATTAACATTCACAGAGCACATAAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 154698 372 + 80904711 CCTCCATCCTGGCTGCTGGTGGCTCCCAGGAGAACCAGCCACACAGGGCAGAGCCAC--CCCTTTACCAAGGCTGCCGGCAGGCTGCAGCACCACCACCCAGCAGGCCCTTCCCCTCCGTCGGAAGAGCCTCTGACATGGCCTGGGGACCACCTGCAAACCCCAGGCCTGTGCCAGCCCCCAGCCACCCC----TCCCAGTCGAAAGCAAGCACCATCATTTCCTGTCGCTTTCAAGCTCCGCTTCCAAAACGCCAAACACCTCCTCCCCCCCCCCCCCCTGCCACTCCCGC--GGTCACCGCCACGTCCCGAGTGCAGAGGAGGG--TAAAAAAGGCAACAGCATCAGCTGTCAGCTATTAACATTCACGGAGCGCATAAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 160567 367 + 80997621 CCTCCATCCTGGCTGCTGGTGGCTCCCAGGAGAACCAGCCACACAGGGCAGAGCCAC--CCCTTTACCAAGGCTGCCGGCAGGCTGCAGCACCACCACCCAGCAGGCCCTTCCCCTCCATCGGAAGAGCCTCTGACACGGCCTGGGGACCACCTGCAAACCCCAGGCCTGTGCCAGCCCCCAGCCACCCC----TCCCAGTCGAAAGCAAGCACCATCATTTCCTGTCGCTTTCAAGCTCCGCTTCCAAAACGCCAAACACCTCCT-----CCCCCCGCCTGCCACTCACGC--GGTCACCGCCACGTCCCGAGTGCAGAGGAGGG--TAAAAAAGGCAACAGCATCAGCTGTCGGCTATTAACATTCACGGAGCGCATAAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 154739 365 + 74645514 CCTCCATCCTGGCTGCTGGTGGCTCCCAGGGGAACCAGC--CACAGGGCAGAGCCAC--CCCTTTACCAAGGCTGCCGGCAGGCTGCAGCACCACTACCCAGCAGGCCCTTCCCCTCCATCGGAAGAGCCTCTGACACAGCCTGGGGACCACCTGCAAACCCCAGGCCTGTGCCAGCCCCCAGCCACCCC----TCCCAGTCGAAAGCAAGCACCATCATTTCCTGTCGCTTTCAAGCTCCGCTTCCAAAACGCCAAACACCTCCT-----CCCCCCGCCTGCCACTCACGC--GGTCACCGCCACGTCCCGAGTGCAGAGGAGGG--TAAAAAAGGCAACAGCATCAGCTGTCGGCTATTAACATTCACAGAGCGCATAAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 136958 360 + 75148670 CCTCCATCCTGGCTGCTGGTGGCTCCCAGGGGAACCAGCCACACAGGGCAGAACCAC--CCCTTTACCAAGGCTGCCGGCAGGCTGCAGCACC---ACCCAGCAGGCCCTTCCCCTCCATCGGAAGAGCCTCTGACACGGCCTGGGGACCACCTGCAAACCCCAGCCCTGTGCCAGCCCCCGGCCACCCC----TCCCACTTGA----AAGAACCATCATTTCCTGTCGCTTTCAAGCTCCACGTCCAAAACGCCAAACGCCTCCT-----CCCCCCGCCTGCCACTCATGC--GGTCACCGCCGCGTCCCGAGTGCAGAGGAGGG--TAAAAAAGGCAACAGCATCAGCTGTCGGCTATTACCATTCACGGAGCGCATAAT i chlSab2.chr16 T 14291 C 0 s calJac3.chrUn_GL286409 957765 347 - 1291538 CCTCCATCCTGGCTGCGGGCGGCTC---AGGGGACCAGCCACACAGGGCCATGCCACCTCTCTATACCAGGGCTT-CGGCAGGCTGCAGCACC---ACCGGGCAGGCCCTTGCCCTCCATCAGAAGAGCGTCTGACACGG-----------CCTGCACGCTCCAGGCCTGCACCCA-CCCCAGCCACCTC----TCCCAGCCGAAAGCAGCCACCATCACGCCCTACTGATTCCAAGCTCAGCTTCCA-------AAACACCTCCT-----CCCTCCACCTGCCACTCAAGCAGAGTTACCACCGCATCCTGAGTGGAGAGGAGGGTTAAAAAAAGGCAACAGCACCAGCTGTTGGTTATTAACATTCACAGAGCACATAAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75888230 284 + 122082543 ----------------TGATGTCTTACCAGGGAACTTGC-----AGTCCCAACCCAT----CTTCAGCCAGG---------------AGCATCTCTGCCTGGC--------TCCCTCCATCT---GAGCCACTGGTAT--CATAGGGACCACGAGCAAGCCTCAGACCTGTGCCAGCCCTC--CCTCCTCACCACCCCCGTTAAATGACACCACCTTCATATCCA------------------------------AAACACCTCCT--------TCCACCTGCCACTCACAC--AGTCACCAACGTGTCCC-AGCAGAGGGGAGGG-TTAAAGAAGGCAAAGGCAGCAGCTCTTGATTACCAACACTCACACGGCCTGTAT- i mm10.chr11 C 0 C 0 s canFam3.chr9 15712696 308 - 61074082 TCTCCAACCTGGCTGTGGGTGGC-----AGGTGCAGGGCCATGCAGGGCCAGGTCTCCCCTCTTCACCCAAGATTCCGGGAGGCTTCACAGTCAGCTTTGAGCAGGCC---CACCTCCACCAGATGAGCCACCGACGTCT------GCCCATCAGCCAGCCCCAGGCC----CCAGCCCCCAGCTGCCTC----TCCCATTTGAAAGAAACCA----------CGGCAGATTTCAGG-------------------AACACCTCAC-----CC--------------CAGCC--AGTCAGCACTGAGCCCTGAGTGGACAGGGGGG-TTCAAAAAAGCAACAGAATCATCTCTGGATTGTTAACATTCATA-AGCGCATGAT i canFam3.chr9 C 0 C 0 e panTro4.chr17 238004 1197 + 82630442 M a score=396885.000000 s hg38.chr17_GL383563v3_alt 262807 123 + 375691 AAGAAATCATGACTTGGACGGGGCTTCGGATCATTTCTGCACT--CGTGCCTCTGCGAGTGTCAGTCTCAGGGAAATCGGGGTATTCAGACGAGATGAAGCCGCCAGGATggctgggggccgggg s panTro4.chr17 239214 123 + 82630442 AAGAAATCATGACTTGGACGGGCTTTCGGATCATTTCTGCACT--CGTGCCTCTGCGAGTGTCAGTCTCAGGGAAATCGGGGTATTCAGACGAGATGAAGCCGCCAGGATGGCTGGGGGCCGGGG i panTro4.chr17 M 1197 C 0 s ponAbe2.chr17 123694 123 + 73212453 AAGAAATCATGACTTGGACGGGGCTTCGGATCATTTCTGCACT--CGTGCCTCTGCGAGTGTCAGTCGCAGGGAAATCGGGATATTCAGACAAGATGAAGCCGCCAGGCTGGCTGGAGGCCGGGG i ponAbe2.chr17 C 0 I 324 s nomLeu3.chr19 243125 123 - 81552678 AAGAAATCATGACTTGGACGGGACTTCGGATCATTTCTGCACT--CATGCCTCTGCTAGTGTCAGTCGCAGGGAAATTGGGGTATTCAGACAAGATGAAGCCGCCAGGCTGGCTGGGGGCCGGAG i nomLeu3.chr19 C 0 I 88 s rheMac3.chr16 155070 123 + 80904711 AAGAAATCATGGCTTGGACGGGGCTTCGGATCGTTTCTGCACT--CGTGCCTCGGCGAGTGTCAGTCGCGGGGAAATCGGTTTATTCTGACAAGATGAAGCCGCCAGGCTGGCTGGGGGCAGGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 160934 123 + 80997621 AAGAAATCATGGCTTGGACGGGGCTTCGGATCGTTTCTGCACT--CGTGCCTCGGCGAGTGTCAGTCGCGGGGAAATCGGTTTATTCTGACGAGATGAAGCCGCCAGGCTGGCTGGGGGCAGGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 155104 123 + 74645514 AAGAAATCATGGCTTGGACGGGGCTTCGGATCGTCTCTGCACT--CGTGCCTCGGCGAGTGTCAGTCGCAGGGAAATCGGTTTATTCTGACGAGATGAAGCCGCCAGgctggctgggggcagggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 137318 123 + 75148670 AAGAAATCATGGCTTGGACCGGGCTTCGGATCGTCTCTGCACT--CGTGCCTCTGCGAGTGTCAGTCGCAGGGAAATCGGTTTATTCTGATGAGATGAAGCTGCCAGGCTGGCTGGGGGCCGGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 958112 123 - 1291538 AAGAAATCATGACTTGGACAGGGCTTCAGATCCTCTCTGCACT--CGTGCCTCTGCGCGTGTCAGACACAGGGAAATCGGGGTGTTCAGACAAGATGAAGCTGCCGGGCTGGCTGGGAGCAGGAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75888514 91 + 122082543 AGGAAACCATGGCCAGAATGTGGCTTCACATCATTTCTGTGTTGCTGTACATCTG--------------------ATCAGGACATT-----GAGGTGAGGC--CCTGCCTGATTTGGG------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15713004 119 - 61074082 AAGAAGTTGTG-CTTACATGCGGCTTTGGGTCATCTCTGGGCT--CAAGCCCCATAGTGCATGTCTGACGGGGATATAGCTAC-TTTGGGTAAGATGAAGCTGCCAGGCTGTCAGGGG--TGGGG i canFam3.chr9 C 0 C 0 a score=6427.000000 s hg38.chr17_GL383563v3_alt 262930 10 + 375691 ctccgggggt s panTro4.chr17 239337 10 + 82630442 GGCCGGGGGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 243336 10 - 81552678 ggACCGGGGT i nomLeu3.chr19 I 88 C 0 s rheMac3.chr16 155193 10 + 80904711 CTCTTGGGGG i rheMac3.chr16 C 0 I 34 s macFas5.chr16 161057 10 + 80997621 GTCCGGGGGG i macFas5.chr16 C 0 I 6 s papAnu2.chr16 155227 10 + 74645514 gtccgggggg i papAnu2.chr16 C 0 I 6 s chlSab2.chr16 137441 10 + 75148670 GTCCAGGGGG i chlSab2.chr16 C 0 I 34 s calJac3.chrUn_GL286409 958235 7 - 1291538 GTCTGGG--- i calJac3.chrUn_GL286409 C 0 I 9 s mm10.chr11 75888605 10 + 122082543 CACCAAGGAC i mm10.chr11 C 0 C 0 s canFam3.chr9 15713123 10 - 61074082 GTATGGATGC i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 123817 324 + 73212453 I a score=4921.000000 s hg38.chr17_GL383563v3_alt 262940 16 + 375691 ggggcagcg------gggtcca- s panTro4.chr17 239347 16 + 82630442 GGGGCAGCG------GGGTCCA- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 243346 16 - 81552678 GGGGCAGCA------GGGTCCA- i nomLeu3.chr19 C 0 I 38 s macFas5.chr16 161073 22 + 80997621 GAGACAGCGCCTCACCTGCCCA- i macFas5.chr16 I 6 I 6 s papAnu2.chr16 155243 22 + 74645514 gAGACAGCGCCTCACCTGCCCA- i papAnu2.chr16 I 6 I 6 s calJac3.chrUn_GL286409 958251 22 - 1291538 GGGCCAGCACCTCACCTGTCTA- i calJac3.chrUn_GL286409 I 9 I 5 s mm10.chr11 75888615 8 + 122082543 --------------AGTGCCCA- i mm10.chr11 C 0 I 6 s canFam3.chr9 15713133 16 - 61074082 -------TGCCCCACCTGCCCCC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 137451 34 + 75148670 I e rheMac3.chr16 155203 34 + 80904711 I e ponAbe2.chr17 123817 324 + 73212453 I a score=235123.000000 s hg38.chr17_GL383563v3_alt 262956 97 + 375691 ggggccTCAGTTAACCCCTTCCCGGTCCTGGTTAACCTCTGCAT--CCCCTCAGTCCCAGAGA------------GGTTTCTGCATCTTTTCCGGCAGGACACGGGAAAC--A s panTro4.chr17 239363 97 + 82630442 GGGGCCTCAGTTAACCCCTTCCCGGTCCTGGTTAACCTCTGCAT--CCCCTCAGTCCCAGAGA------------GGTTTCTGCATCTTTTCCGGCAGGACACGGGAAAC--A i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 243400 97 - 81552678 GGGGCCTCAGTTAACCCCTTCCCCGTCCTGGTTAACCTCGGCAT--CCCCTCAGTCCCAGAGA------------GGTTTCTGCATCTTTTCCGGCAGGACACGGGAAAC--A i nomLeu3.chr19 I 38 C 0 s rheMac3.chr16 155237 101 + 80904711 GGGGCCTCGGTGAACCCCTTCCCGGTCCTGGTTAACCTCTGCATCCCCTCTCAGTCCCACAGA------------GCTTTCTGCATCTTTTCCGGCCAGACACGGGGAACAAA i rheMac3.chr16 I 34 C 0 s macFas5.chr16 161101 101 + 80997621 GGGGCCTCGGTGAACCCCTTCCCGGTCCTGGTTAACCTCTGCATCCCCTCTCAGTCCCACAGA------------GCTTTCTGCATCTTTTCCGGCCAGACACGGGGAACAAA i macFas5.chr16 I 6 C 0 s papAnu2.chr16 155271 101 + 74645514 GGGGCCTCGGTGAACCCCTTCCCGGTCCTGGTTAACCTCTGCGTCCCCTCTCAGTCCCACAGA------------GGTTTCTACATCTTTTCCGGCCGGACACGGGGAACAAA i papAnu2.chr16 I 6 C 0 s chlSab2.chr16 137485 100 + 75148670 GGGGCCTCGGTGAACCCCTTCCCAGTCCTGGTTAACCTCGGCAT-CCCTCTCAGTCCCAGAGA------------GGTTTCTGCATCTTTTCCAGCAGGACACGGGGAACAAA i chlSab2.chr16 I 34 C 0 s calJac3.chrUn_GL286409 958278 100 - 1291538 CAGGCCTCAGTTAACCCCTTCCTGGTCCTGGTTAACTTCTGCAT-CCCCCTCAGTCCCAGAGA------------GTTTTCTGCATCTTTCCCAGCAGGACACAGGAAACAAA i calJac3.chrUn_GL286409 I 5 C 0 s mm10.chr11 75888629 108 + 122082543 ----CCTCTTTTTAACCCTTTCTAGTCCTAATGAACCTCCTCATCCCACTCCAGACTGTGAGATTGAATTTGG-GAGTTTCTGTCTTCTTTCCGATGGGCCATAGAAATGGGT i mm10.chr11 I 6 C 0 s canFam3.chr9 15713149 106 - 61074082 TCAACCCCACT--AACTCTTTCAGGTTCTGCTTATCCTCAGCATCACCTTTCAGACC---AGACCCCGTGTGTCCGACTTTTGCCTCTTTTCCAGACAAACATGGGAAACA-- i canFam3.chr9 C 0 I 1616 e ponAbe2.chr17 123817 324 + 73212453 I a score=167873.000000 s hg38.chr17_GL383563v3_alt 263053 77 + 375691 GGAGGTTTGAGCCATCGAGAACTGGGCT----GAGGGC------------CGTGCAGCACCGGTGATGGGAGCACGGTGCA------------CTCAACAGGAGC s panTro4.chr17 239460 77 + 82630442 GGAGGTTTGAGCCATCGAGAACTGGGCT----GAGGGC------------TGTGCAGCATGGGTGACGGGAGCACGGTGCA------------CCCAACAGGAGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 243497 77 - 81552678 GGAGGTTTGAGCCGTCTAGAACTGGGCT----GAGGGC------------TGTGCAGCACGGGTGATGGGAGCACGGTGCA------------TCCAACAGGAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 155338 77 + 80904711 GGAGGTTTGAGCCGTCTGGAACCGGACC----GAGGGC------------TGTGCAGCATGAGTGACGCGGGTACGGTGCA------------TTCAACAGGAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 161202 77 + 80997621 GGAGGTTTGAGCCATCTGGAACTGGACC----GAGGGC------------TGTGCAGCATGAGTGACGGGGGTACGGTGCA------------TTCAACAGGAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 155372 77 + 74645514 GGAGGTCTGAGCCGTCTGGAACTGGACC----GAGGGC------------TGTGCAGCATGAGTGACGGGGGCACGCTGCA------------TTCAACAGGAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 137585 77 + 75148670 GGAGGTTTGAGCCGCCTGGAACTGGACC----GAGGGC------------TGTGCAGCATGAGTGACGGGGACACGGTGCA------------TTCAACAGGAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 958378 77 - 1291538 GGAGGCCTGAGCCATCCTGAACTGGGCC----AAGGAT------------TGTGCAGCATGGGGGATGCAGGTACAGTGCA------------TTCCACATGAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75888737 104 + 122082543 GTGTGTGTGTGCAGTGAGGGGCAGGGACACAGGAGGGCAGGGGACAGAGGTGTGTAGTGTGGGT-CTAGGAGCACAGTGCAGGCAGAGCCGATTTCAACAAGAAC i mm10.chr11 C 0 C 0 e canFam3.chr9 15713255 1616 - 61074082 I e ponAbe2.chr17 123817 324 + 73212453 I a score=225858.000000 s hg38.chr17_GL383563v3_alt 263130 83 + 375691 TTCGGCCAAGGG--GTGGATGGGATGGCTAAATCAGAAGGTGGGAGGAGGGTTTTTAAAAACCAGCAAATCTggtcgggcgcggt s panTro4.chr17 239537 83 + 82630442 TGCGGCCAAGGG--GTGGATGGGGTGGCTAAATCAGAAGGTGGGAGGAGGGTTTTTAAAACCCAGCAAATCTggtcaggtgcggt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 124141 83 + 73212453 TTCGGCCAAGGGGAGCGGATGGGGTGGCT-AATCAGAAGGTGGGGAGGAGGGTTTTCAAATCCAACAAATCT-GTCACgcgcagt i ponAbe2.chr17 I 324 C 0 s nomLeu3.chr19 243574 83 - 81552678 TTCAGCCAAGGG--GTGGATGGGGTGGCTAAATCAGAAGGTGGGAGGAGGGTTTTTAAAAACCAGCAAATCTggccagtcgcggt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 155415 83 + 80904711 TTGGGCCAAGGG--GTGGATGGGGTGGCTAAACCAGAAGGTGAGAGGGGGGTTTTCAAAAACCAGCAAATCTggccgggcgcggt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 161279 83 + 80997621 TTGGGCCAAGGG--GTGGGTGGGGTGGCTAAACCAGAAGGTGAGAGGGGGGTTTTCAAAAACCAGCAAATCTggccgggcgcggt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 155449 83 + 74645514 TTGGGCCAAGGG--GTGGATGGGGTGGCTAAACCAGAAGGTGAGAGGGGGGTTTTCAAAACCCAgcaaatctggccgggcgcggt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 137662 83 + 75148670 TTGGGCCAAGGG--GTGGATGGGGTGGCTAAACCAGAAGGTGAGAGGGGGGTTTTCAAAAACCAGCAAATCTGTccgggcgcggt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 958455 83 - 1291538 TTGGGCCAAGGG--GTGGATGGGGTGGCTCAACTGGAAAGTGAGAGGTTGGTTTTTAAAAACCAGCAAATCTgactgagcatggt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75888841 74 + 122082543 TTGGGCAAAGAG----GGACGTGTCATCC-AGTCAGAAGCTGGAAGA------CTGAAACAACAGAAAACCTAATTCTGGGCAGT i mm10.chr11 C 0 I 3180 e canFam3.chr9 15713255 1616 - 61074082 I a score=791486.000000 s hg38.chr17_GL383563v3_alt 263213 286 + 375691 ggctcacgcctgtaatcccagcaatttgggaggctgaggtgggcggatcgcctgaggtcaggagttcaacaccaacctggccaacaaggcgaaaccccgtctctact-aaaaatacaaaaattagccgggcgcggtggtactcacccggaatcccagctacttggt-ggctgaggtaggagaactgcttgaaaccagaagtcggaagttgcagtgagctgagattgcaccactgcattacagcctgggtgac-agagcaagactcggtctcaaaa-aaata---aaataaaaa s panTro4.chr17 239620 286 + 82630442 ggctcacgcctgtaatcccagcaatttgggaggctgaggtgggcggatcgcctgaggtcaggagttcaacaccaacctggccaacaaggcgaaaccccgtctctact-aaaaatacaaaaattagccaggcgtggtggtgcgcacctggaatcccagctacttggt-ggctgaggtaggagaactgcttgaaaccagaagtcggaagttgcagtgagctgagattgcaccactgcattacagcctgggtgac-agagcaagactcggtctcaaaa-aaata---aaataaaaa i panTro4.chr17 C 0 I 2767 s ponAbe2.chr17 124224 283 + 73212453 ggctcacgcctgtaatcccagcactt--gggggccgaggtgggcggatcatctgaggtcaggagttcaacaccaacctggccaacacggcgaaaccctgtctctact-aaaaatacaaaaa-tagccaggcgtggtggtaagcacctggaatcccagctatgtggt-ggctgaggtaggagaattgcttgaaaccaggaggcagaagttgcagtgagctgagattgcaccactgcattgcagcctgggtgac-agagcaagactcggtctcaaaa-aaata---aaataaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 243657 287 - 81552678 ggctcacacctgtaatcccagcactttggggggccaaggtgggcggatcacctgaggtcaggagttcaagaccaacctggccaacatggtgaaaccctgtctctactaaaaaatacaaaaattagccgggcatggtggtgggcacctggaatcccagctacttggt-ggctgaggtaggagaactgcttgaaaccagaaggcggaagtttcagtgagctgagattgcaccactgcattatagcccaggtgac-agagcaagactctgtctcaaaa-aaata---aaaaataaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 155498 283 + 80904711 ggctcatggctgtgatcccagcactttgggggaccaaggt-ggcgaatca--tgaggtcaggagttcaagaccaacctggccaacacagtgaaaccccgtctttact-aaaaatacaaaaattagctgggcgtggtggtatgcacctggaatcccagctacttggt-ggctgaggcaggagaactgcttgaaaccagaaggcggaggttgcagtgagctgagatcatgccaccgcactccagcctgggtgac-agagcaagactctgtctcaaaa-aaata---aaataaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 161362 283 + 80997621 ggctcatggctgtgatcccagcactttgggggaccaaggt-ggcgaatca--tgaggtcaggagttcaagaccaacctggccaacacagtgaaaccccgtctttact-aaaaatacaaaaattagctgggcgtggtggtacgcacctggaatcccagctacttggt-ggctgaggcaggagaactgcttgaaaccagaaggcggaggttgcagtgagctgagatcatgccaccgcactccagcctgggtgac-agagcaagactctgtctcaaaa-aaata---aaataaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 155532 284 + 74645514 ggctcatggctgtgatcccagcactttgggggaccaaggtgggcgaatca--tgaggtcaggagttcaagaccaacctggccaacatagtgaaaccccgtcttcact-aaaaatacaaaaattagctgggcatggtggtacgcacctggaatcccagctacttggt-ggctgaggcaggagaattgcttgaaaccagaaggcggaagttgcagtgagctgagatggcaccactgcactccagcctgggtgac-agagcaagactctgtctcaaaa-aaata---aaataaaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 137745 284 + 75148670 ggctcatggctgtgatcccagcactttgggggaccaaggtgggcgaatca--tgaggtcaggagttcgagaccaacctggccaacacagtgaaaccccatctttact-aaaaatacaaaaattagctgggcgtggtggtacgcacctggaatcccagctacttggt-ggctgaggcaggagaattgcttgaaaccagaaggcggaagttgcagtgagctgagatggcaccactacactccagcctgggtaac-agagcaagactctgtctcaaaa-caata---aaataaaaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 958538 290 - 1291538 agctcacacctgtaatcccagcacttggggaggccaaggtggccgaatca--tgaggtcaagagatcaagaccatcctggtcaacatggtgaaaccccgtctctact-aaaaatacaaaaattagctgggcgtggtggtgcacgcctgtggtcccagctactcgggaggctgaggcaggagaattgcttgaatccaggaggcagaggttgcagtgagctgagattgcgccattgcactcaaacctgggtaacaagagtgaaactctgtctcaaaataaataaataaataaaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I a score=235416.000000 s hg38.chr17_GL383563v3_alt 263499 131 + 375691 taaaaCCCAGCAAATCTAATAATGTTCAATCA-AAGGGGAAAGCACAGGACGTGGGGCTTGGTCTCCAGGGGTTCCTGAGTTCATTCAGCATCTGTGGAGGACACAGTG--GTGCCAGGTACGAGCCCAGTGTG-- s ponAbe2.chr17 124507 127 + 73212453 taaaaCCCAGCAAATCTAATAATGTTCAATCA-AAGGGGGAAGCACAGGACGTGGGGCTTGGTCTCCAGGGGTTCATGAGTTCATTCGGCATCTGTGGAGGACACAGTG-CGTGCCAGGTACGAGCCCA------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 243944 133 - 81552678 taaaaCGCAGCAAATCTAATAATGTTCAATCACAGGGGGGAAGCAGAGGACGTGGGGCTTGGTCTCCA-GGGTTCATGAGTTCATTCAGCATCTATGGAGGACACAGTGGGGTGCCAGGTACGAGCCCAGTGTG-- i nomLeu3.chr19 C 0 M 810 s rheMac3.chr16 155781 115 + 80904711 taaaaCCCAGCAAATCTAATAACGT----TCA-AAGGGGGAAGCACAGGACGTGGGGCTTGGTCTCCAG--------GAGTTCATTCAGCATCTGTGGAGGACACGGTG-GGTGCCAGGTCTGAGCCCA------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 161645 115 + 80997621 taaaaCCCAGCAAATCTAATAACGT----TCA-AAGGGGGAAGCACAGGACGTGGGGCTTGGTCTCCAG--------GAGTTCATTCAGCATCTGTGGAGGACACGGTG-GGTGCCAGGTCTGAGCCCA------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 155816 119 + 74645514 taaaacccagcaaATCTAATAACGTTCAATCA-AAGGGGGAAGCACAGGACGTGGGGCTTGGTCTCCAG--------GAGTTCATTCAGCACCTGTGGAGGACACGGTG-GGTGCCAGGTCTGAGCCCA------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 138029 119 + 75148670 taaaaCCCAGCAAATCTAATAATGTTCAATCA-AAGGGGGAAGCACAGGACGTGGGGCTTGGTCTCCAG--------GAGTTCATTCAGCATCTGTGGAGAACACAGTG-GGGGCCAGGTCTGAGCCCA------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 958828 127 - 1291538 taaaaCACAGCAAACCTAATAGCATACAATC--ACGGGGGAAGCACAGGACATGGTGC-TGGTCTCCAGGAGTGAGCTTGTTCATTCAGCATCTGTGGAGGACACAGAG-GGTGCCAGGTATAAGCCCA-----GT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e panTro4.chr17 239906 2767 + 82630442 I a score=529795.000000 s hg38.chr17_GL383563v3_alt 263630 349 + 375691 AGGTGTGAGGTGTGAGGAGTGCTGATGGGATGAAGAGACGTACAAACGCCAGCATgggatggaccacttgagcccaggtgatcaagaccagcctgggcaacatagcaagaccccgtctctacaaaaaaaaaaatacaaaaattagccgagcatgctggtgcacacctgcagtcacagctacttggaagaatcgtttgagctcagaaggtcgaggctgcagtgagttgtgattgcaccacagcactgcagcctgggtgacagagtgagacccagactcgaaTTTTAAAAAGGCCAACCTGAGTGGACACAGCATTAAGTCTGACCAGGACTGAAGAACACCTGTGCAGAA s ponAbe2.chr17 124634 338 + 73212453 --GTGCGAGCTGTGAGGAGTGCTAATGGGATGAAGAGACGTACAAACGCCAGCATgggatggatcacttgagcccaggaggtcaagaccagcctgggcaacatagcaagaccccgtctctac--aaaaaaaaatacaaaaattagccgagcatggtggtgcacacctgtagtcccagctacttggaagaatcgtttgagcccagaaggtcgaggctgcagtgagttgtgattgcgccacggcactccagcctgggtgacagagtgagacccagtctcaaaTTTTATAAAGGCCAACCTGAGTGGACAGAGCAACAAGTCTGACCAGGACTGAAGAACACCTG------- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 155896 340 + 80904711 --GCGTGGGGTGTGGGGACTGCTGATGTGGTGAAGAGATGTACAAATGCCAGCAcgggacggatcacttgagcccaggaggtcaagaccagcctgggcaacatagcaagaccccatctctac---aagaaaaatacaaaagttagccgggcctgggggtgcacacctgtagtcccagctactcgtaacaatcgtttgagctcagaaggtcgaggctacagtgggttgtgattggaccacagcactccagcctgggtg--agagtgagacccA--CTCAGATTTTAAAAAGGCCAACCTGAGTGGACAGAGTATTAAGTCTGACCGGGACTGAAGAACACCTGTGCAGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 161760 340 + 80997621 --GCGTGGGGTGTGGGGACTGCTGATGTGGTGAAGAGATGTACAAATGCCAGCAcgggacggatcacttgagcccaggaggtcaagaccagcctgggcaacatagcaagaccccatctctac---aagaaaaatacaaaagttagccgggcctggtggtgcacacctgtagtcccagctactcgtaacaatcgtttgagctcagaaggtcgaggctacagtgggttgtgattggaccacagcactccagcctgggtg--agagtgagacccA--CTCAGATTTTAAAAAGGCCAACCTGAGTAGACAGAGTATTAAGTCTGACCGGGACTGAAGAACACCTGTGCAGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 155935 340 + 74645514 --GCGTGAGGTGTGGGGACTGCTGATGTGGTGAAGAGATGTACAAATGCCAGCAGgggacggatcacttgagctcaggaggtcaagaccagcctgggcaacatagcaagaccccgtctctac---aagaaaaatacaaaagttagccgggcctggtggtgcacacctgtagtcccagctactcggaacaatcatttgagctcagaaggtcgaggctacagtgggTTGTGATTGGACCacagcgctccagcctgggtg--agagtgagaccca--ctcaaatttttaaaaggccaacCTGAGTGGACAGAGTATTAAGTCTGACCGGGACTGAAACACACCTGTGCAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 138148 340 + 75148670 --GCATGAGGTGTGGGGGCTGCTGATGTGGTGAAGAGATCTACAAATGCCAGCAGGggagggatcacttgagcccaggaggtcgagaccagcctgggcaacatagcaagaccctgtctctac---aagaaaaatacaaaagttagccgggcctgggggtgcacacctgtagtcccagctactcggaacaatcgtttgagctcagaaggtcgaggctacagtgggttgtgactggaccacagcactccagcctgggtg--agagtgagacccA--CTCAAATTTTTAAAAGGCCAACCTGAGCGGACAGAGCATTAAGTCTGACCAGGACTGAAGAACACCTGTGCAGAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 958955 315 - 1291538 CAGTGGAAGGTGTGAGGAGTACTGGTGGGGTAAAGAGACGTACAGATGCCAGCATGAGATgggtcacttgagcccaggagttcgagactagcctgggcagcacagcaagaccccgtctct-----gggaaaattacaaaaattagccgggcatggtggtgcacacctgtagtcccagctacttggaagaatcatttgagcccagaaggtcgaggctgcagtgagctatgactgt------gcactccagcctgggtggtagagcgaggccGA-----------------------CCTGAGTGGACACAGTATGACATCTGAGCAGGACTGAAGAGCAGCTGTGTAGAA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e nomLeu3.chr19 244077 810 - 81552678 M e panTro4.chr17 239906 2767 + 82630442 I a score=3822.000000 s hg38.chr17_GL383563v3_alt 263979 2 + 375691 AT s nomLeu3.chr19 244889 2 - 81552678 AT i nomLeu3.chr19 M 810 C 0 s rheMac3.chr16 156236 2 + 80904711 AT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 162100 2 + 80997621 AT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 156275 2 + 74645514 AT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 138488 2 + 75148670 AT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 959270 2 - 1291538 AT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e ponAbe2.chr17 124972 0 + 73212453 C e panTro4.chr17 239906 2767 + 82630442 I a score=6919.000000 s hg38.chr17_GL383563v3_alt 263981 7 + 375691 GGACGGC s nomLeu3.chr19 244891 7 - 81552678 GGCCGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 156238 7 + 80904711 GGACGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 162102 7 + 80997621 GGACGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 156277 7 + 74645514 GGACATC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 138490 7 + 75148670 GGACGTC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e ponAbe2.chr17 124972 0 + 73212453 C e panTro4.chr17 239906 2767 + 82630442 I a score=27649.000000 s hg38.chr17_GL383563v3_alt 263988 37 + 375691 AGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAG s nomLeu3.chr19 244898 36 - 81552678 AGA-GGAATGCACATCAGTGTGGGAGGGACAGAGGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 156245 37 + 80904711 AGGGGGAACGCACCTCAGTGTGGGACGGACAGAGGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 162109 37 + 80997621 AGGGGGAACGCACCTCAGTGTGGGACGGACAGAGGAG i macFas5.chr16 C 0 T 53 s chlSab2.chr16 138497 36 + 75148670 -GGGGGAACACACCTCAGTGTGGGACGGACCGAGGAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e papAnu2.chr16 156284 0 + 74645514 C e ponAbe2.chr17 124972 0 + 73212453 C e panTro4.chr17 239906 2767 + 82630442 I a score=3260.000000 s hg38.chr17_GL383563v3_alt 264025 16 + 375691 CTGCAGAAATGGATGG s ponAbe2.chr17 124972 15 + 73212453 -TGCAGAAATGGATGG i ponAbe2.chr17 C 0 I 1431 s nomLeu3.chr19 244934 16 - 81552678 CTGCAGACATGGCCGG i nomLeu3.chr19 C 0 I 59 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 264041 1 + 375691 A e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e nomLeu3.chr19 244950 59 - 81552678 I e ponAbe2.chr17 124987 1431 + 73212453 I e panTro4.chr17 239906 2767 + 82630442 I a score=582.000000 s hg38.chr17_GL383563v3_alt 264042 6 + 375691 CAGAGG s ponAbe2.chr17 126418 6 + 73212453 CAGAGG i ponAbe2.chr17 I 1431 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e nomLeu3.chr19 244950 59 - 81552678 I e panTro4.chr17 239906 2767 + 82630442 I a score=8016.000000 s hg38.chr17_GL383563v3_alt 264048 33 + 375691 GAATGCACATCAGTGTGGGAGGGACACAGATGC s ponAbe2.chr17 126424 33 + 73212453 GAATGCACATCAGTGTGGGAGGGACAGAGACGC i ponAbe2.chr17 C 0 T 1453 s nomLeu3.chr19 245009 33 - 81552678 GAATGCACATCAGTGTGGGAGGGACAGGGGAGC i nomLeu3.chr19 I 59 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=1678.000000 s hg38.chr17_GL383563v3_alt 264081 30 + 375691 TGCAGAAATGGACAGCAGAGGGAATGCACA- s nomLeu3.chr19 245042 31 - 81552678 TGCACACATGGCCGGCAGAGGGAATGCACAT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e ponAbe2.chr17 126457 1453 + 73212453 T e panTro4.chr17 239906 2767 + 82630442 I a score=8669.000000 s hg38.chr17_GL383563v3_alt 264111 38 + 375691 CAGTGTGGGAGGGACAGAGATGCTGCAGAAATGGACGG s ponAbe2.chr17 125004 38 + 73212453 CAGTGTGGGAGGGACAGAGACGCTGCAGAAATGGACGG i ponAbe2.chr17 T 1453 C 0 s nomLeu3.chr19 245073 38 - 81552678 CAGTGTGGGAGGGACAGGGGAGCTGCACACATGGCCGG i nomLeu3.chr19 C 0 T 161 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=100.000000 s hg38.chr17_GL383563v3_alt 264149 1 + 375691 G s ponAbe2.chr17 125042 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e nomLeu3.chr19 245111 161 - 81552678 T e panTro4.chr17 239906 2767 + 82630442 I a score=7732.000000 s hg38.chr17_GL383563v3_alt 264150 34 + 375691 CAGAGGGAATGCACATCAGTGTGGGAAGGACAGA s ponAbe2.chr17 125043 34 + 73212453 CAGAGGGAATGCACATCGGTGTGGGAGGGACAGA i ponAbe2.chr17 C 0 I 1430 s nomLeu3.chr19 244950 33 - 81552678 CAGA-GGAATGCACATTGGTGTGGGAGGGACAGG i nomLeu3.chr19 T 161 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=3300.000000 s hg38.chr17_GL383563v3_alt 264184 20 + 375691 AGAGCTGCAGAAATGGACGG s ponAbe2.chr17 126507 20 + 73212453 GATGCTGCAGAAATGGACAG i ponAbe2.chr17 I 1430 C 0 s nomLeu3.chr19 244983 20 - 81552678 GGAGCTGCACACATGGCCGG i nomLeu3.chr19 C 0 T 53 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=2730.000000 s hg38.chr17_GL383563v3_alt 264204 31 + 375691 GCAGAGGGAATGCACATCAGTGTGGGAGGGA s ponAbe2.chr17 126527 31 + 73212453 GCAGAAGGAATGCACATCGGTGTGGGAGGGA i ponAbe2.chr17 C 0 T 140 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e nomLeu3.chr19 245003 53 - 81552678 T e panTro4.chr17 239906 2767 + 82630442 I a score=8786.000000 s hg38.chr17_GL383563v3_alt 264235 39 + 375691 CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGC s ponAbe2.chr17 126418 39 + 73212453 CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGACGC i ponAbe2.chr17 T 140 T 54 s nomLeu3.chr19 244950 38 - 81552678 CAGA-GGAATGCACATTGGTGTGGGAGGGACAGGGGAGC i nomLeu3.chr19 T 53 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=12122.000000 s hg38.chr17_GL383563v3_alt 264274 55 + 375691 TGCAGAAATGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGATGC s ponAbe2.chr17 126403 54 + 73212453 TGCAGAAATGGATGG-CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGACGC i ponAbe2.chr17 T 54 C 0 s nomLeu3.chr19 244988 54 - 81552678 TGCACACATGGCCGG-CAGAGGGAATGCACATCAGTGTGGGAGGGACAGGGGAGC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162146 53 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=5486.000000 s hg38.chr17_GL383563v3_alt 264329 15 + 375691 TGCAGAAATGGACAG s ponAbe2.chr17 126457 15 + 73212453 TGCAGACATGGACGG i ponAbe2.chr17 C 0 I 56 s nomLeu3.chr19 245042 15 - 81552678 TGCACACATGGCCGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 162093 15 + 80997621 TGCAGAAATGGACGT i macFas5.chr16 T 53 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=19500.000000 s hg38.chr17_GL383563v3_alt 264344 41 + 375691 CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGATGCTG s ponAbe2.chr17 126528 41 + 73212453 CAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTG i ponAbe2.chr17 I 56 C 0 s nomLeu3.chr19 245057 41 - 81552678 CAGAGGGAATGCACATCAGTGTGGGAGGGACAGGGGAGCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 162108 41 + 80997621 CAGGGGGAACGCACCTCAGTGTGGGACGGACAGAGGAGCTG i macFas5.chr16 C 0 T 56 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=2206.000000 s hg38.chr17_GL383563v3_alt 264385 13 + 375691 CAGAAATGGATGG s ponAbe2.chr17 126569 13 + 73212453 CAGAAATGGACGG i ponAbe2.chr17 C 0 I 164 s nomLeu3.chr19 245098 13 - 81552678 CACACATGGCCGG i nomLeu3.chr19 C 0 I 54 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=-31.000000 s hg38.chr17_GL383563v3_alt 264398 1 + 375691 A s ponAbe2.chr17 126746 1 + 73212453 G i ponAbe2.chr17 I 164 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e nomLeu3.chr19 245111 54 - 81552678 I e panTro4.chr17 239906 2767 + 82630442 I a score=10094.000000 s hg38.chr17_GL383563v3_alt 264399 53 + 375691 CAGAGGGAATGCACATCAGTGTGGGAGGGACACAGATGCTGTAGAAATGGA-AA s ponAbe2.chr17 126747 54 + 73212453 CAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGACGCTGCAGACATGGACGG i ponAbe2.chr17 C 0 T 1814 s nomLeu3.chr19 245165 53 - 81552678 CAGAGGGAATGAACATCAGTGTGGGAGGGACAGGGGAGCTGCAGACATGGATG- i nomLeu3.chr19 I 54 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=2346.000000 s hg38.chr17_GL383563v3_alt 264452 8 + 375691 GCAGAGGG s ponAbe2.chr17 124987 8 + 73212453 GCAGAGGG i ponAbe2.chr17 T 1814 C 0 s nomLeu3.chr19 245218 8 - 81552678 GCAGAGGG i nomLeu3.chr19 C 0 T 270 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=10701.000000 s hg38.chr17_GL383563v3_alt 264460 47 + 375691 AATGCACATCAGTGTGGGAGGGACAGAGATGCTGCAGAAATGGACGG s ponAbe2.chr17 124995 47 + 73212453 AATGCACATCAGTGTGGGAGGGACAGAGACGCTGCAGAAATGGACGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 244956 47 - 81552678 AATGCACATTGGTGTGGGAGGGACAGGGGAGCTGCACACATGGCCGG i nomLeu3.chr19 T 270 T 53 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=100.000000 s hg38.chr17_GL383563v3_alt 264507 1 + 375691 G s ponAbe2.chr17 125042 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e nomLeu3.chr19 245003 53 - 81552678 T e panTro4.chr17 239906 2767 + 82630442 I a score=8032.000000 s hg38.chr17_GL383563v3_alt 264508 35 + 375691 CAGAGGGAATGCACATCAGTGTGGGAAGGACAGAG s ponAbe2.chr17 125043 35 + 73212453 CAGAGGGAATGCACATCGGTGTGGGAGGGACAGAG i ponAbe2.chr17 C 0 I 1614 s nomLeu3.chr19 244950 34 - 81552678 CAGA-GGAATGCACATTGGTGTGGGAGGGACAGGG i nomLeu3.chr19 T 53 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=1193.000000 s hg38.chr17_GL383563v3_alt 264543 19 + 375691 GAGCTGCAGAAATGGACGG s nomLeu3.chr19 244984 19 - 81552678 GAGCTGCACACATGGCCGG i nomLeu3.chr19 C 0 T 53 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e ponAbe2.chr17 125078 1614 + 73212453 I e panTro4.chr17 239906 2767 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 264562 31 + 375691 GCAGAGGGAATGCACATCAGTGTGGGAGGGA e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e nomLeu3.chr19 245003 53 - 81552678 T e ponAbe2.chr17 125078 1614 + 73212453 I e panTro4.chr17 239906 2767 + 82630442 I a score=9467.000000 s hg38.chr17_GL383563v3_alt 264593 39 + 375691 CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGC s ponAbe2.chr17 126692 39 + 73212453 CAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGGAGC i ponAbe2.chr17 I 1614 T 328 s nomLeu3.chr19 244950 38 - 81552678 CAGA-GGAATGCACATTGGTGTGGGAGGGACAGGGGAGC i nomLeu3.chr19 T 53 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=11672.000000 s hg38.chr17_GL383563v3_alt 264632 55 + 375691 TGCAGAAATGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACACAGATGC s ponAbe2.chr17 126403 54 + 73212453 TGCAGAAATGGATGG-CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGACGC i ponAbe2.chr17 T 328 C 0 s nomLeu3.chr19 244988 54 - 81552678 TGCACACATGGCCGG-CAGAGGGAATGCACATCAGTGTGGGAGGGACAGGGGAGC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=2498.000000 s hg38.chr17_GL383563v3_alt 264687 7 + 375691 TGCAGAA s ponAbe2.chr17 126457 7 + 73212453 TGCAGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245042 7 - 81552678 TGCACAC i nomLeu3.chr19 C 0 T 160 s macFas5.chr16 162093 7 + 80997621 TGCAGAA i macFas5.chr16 T 56 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=20013.000000 s hg38.chr17_GL383563v3_alt 264694 49 + 375691 ATGGACAG-CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGATGCTG s ponAbe2.chr17 126464 50 + 73212453 ATGGACGGGCAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGATGCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 244889 48 - 81552678 ATGGCCGG-CAGA-GGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTG i nomLeu3.chr19 T 160 C 0 s macFas5.chr16 162100 49 + 80997621 ATGGACGT-CAGGGGGAACGCACCTCAGTGTGGGACGGACAGAGGAGCTG i macFas5.chr16 C 0 T 56 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=38610.000000 s hg38.chr17_GL383563v3_alt 264743 177 + 375691 CAGAAATGGACGGGCAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGACGGGCAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATG s ponAbe2.chr17 126514 177 + 73212453 CAGAAATGGACAGGCAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGACGGGCAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGATGCTGCAGAAATGGACGGGCAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATG i ponAbe2.chr17 C 0 T 55 s nomLeu3.chr19 244937 173 - 81552678 CAGACATGGCC-GGCAGA-GGAATGCACATTGGTGTGGGAGGGACAGGGGAGCTGCACACATGGCC-GGCAGAGGGAATGCACATCAGTGTGGGAGGGACAGGGGAGCTGCACACATGGCCGG-CAGAGGGAATGCACATCAGTGTGGGAGGGACAGGGGAGCTGCACACATGGCCG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=300.000000 s hg38.chr17_GL383563v3_alt 264920 1 + 375691 G s ponAbe2.chr17 126636 1 + 73212453 G i ponAbe2.chr17 T 55 C 0 s nomLeu3.chr19 245110 1 - 81552678 G i nomLeu3.chr19 C 0 I 162 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=-31.000000 s hg38.chr17_GL383563v3_alt 264921 1 + 375691 A s ponAbe2.chr17 126637 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e nomLeu3.chr19 245111 162 - 81552678 I e panTro4.chr17 239906 2767 + 82630442 I a score=1484.000000 s hg38.chr17_GL383563v3_alt 264922 6 + 375691 CAGAGG s ponAbe2.chr17 126638 6 + 73212453 CAGAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245273 6 - 81552678 CAGAGG i nomLeu3.chr19 I 162 I 53 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=7885.000000 s hg38.chr17_GL383563v3_alt 264928 33 + 375691 GAATGCACATCAGTGTGGGAGGGACACAGATGC s ponAbe2.chr17 126644 33 + 73212453 GAATGCACATCGGTGTGGGAGGGACAGAGGAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245332 33 - 81552678 GAATGCACATTGGTGTGGGAGGGACAGAGGAGC i nomLeu3.chr19 I 53 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=10400.000000 s hg38.chr17_GL383563v3_alt 264961 22 + 375691 TGCAGAAATGGAAAGCAGAGGG s ponAbe2.chr17 126677 22 + 73212453 TGCAGAAATGGATGGCAGAGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245365 22 - 81552678 TGCAGAAATGGACGGCAGAGGG i nomLeu3.chr19 C 0 T 108 s macFas5.chr16 162093 22 + 80997621 TGCAGAAATGGACGTCAGGGGG i macFas5.chr16 T 56 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=17089.000000 s hg38.chr17_GL383563v3_alt 264983 34 + 375691 AATGCACATCAGTGTGGGAGGGACAGAGGAGCTG s ponAbe2.chr17 126699 34 + 73212453 AATGCACATCGGTGTGGGAGGGACAGAGGAGCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245279 34 - 81552678 AATGCACATCGGTGTGGGAGGGACAGGGGAGCTG i nomLeu3.chr19 T 108 C 0 s macFas5.chr16 162115 34 + 80997621 AACGCACCTCAGTGTGGGACGGACAGAGGAGCTG i macFas5.chr16 C 0 T 74 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=9276.000000 s hg38.chr17_GL383563v3_alt 265017 40 + 375691 CAGAAATGGATGGGCAGAGGGAATGCACATCAGTGTGGGA s ponAbe2.chr17 126733 40 + 73212453 CAGAAATGGACGGGCAGAGGGAATGCACATCGGTGTGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245313 39 - 81552678 CAGACATGGAT-GGCAGAGGGAATGCACATTGGTGTGGGA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 74 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=10305.000000 s hg38.chr17_GL383563v3_alt 265057 26 + 375691 GGGACAGAGGAGC-----TGCAGAAATGGAC s ponAbe2.chr17 126773 26 + 73212453 GGGACAGAGACGC-----TGCAGACATGGAC i ponAbe2.chr17 C 0 T 107 s nomLeu3.chr19 245352 26 - 81552678 GGGACAGAGGAGC-----TGCAGAAATGGAC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 162075 31 + 80997621 GGGACTGAAGAACACCTGTGCAGAAATGGAC i macFas5.chr16 T 74 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=-651.000000 s hg38.chr17_GL383563v3_alt 265083 2 + 375691 AG- s nomLeu3.chr19 245378 2 - 81552678 GG- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 162106 2 + 80997621 -GT i macFas5.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e ponAbe2.chr17 126799 107 + 73212453 T e panTro4.chr17 239906 2767 + 82630442 I a score=17645.000000 s hg38.chr17_GL383563v3_alt 265085 41 + 375691 CAGAGGGAATGCACATCAGTGTGGGAGGGACACAGATGCTG s ponAbe2.chr17 126692 41 + 73212453 CAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTG i ponAbe2.chr17 T 107 C 0 s nomLeu3.chr19 245380 41 - 81552678 CAGAGGGAATGCACATCTGTGTAAGAGGGACAGAGGAGCTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 162108 41 + 80997621 CAGGGGGAACGCACCTCAGTGTGGGACGGACAGAGGAGCTG i macFas5.chr16 C 0 T 56 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=2757.000000 s hg38.chr17_GL383563v3_alt 265126 12 + 375691 CAGAAATGGATG s ponAbe2.chr17 126733 12 + 73212453 CAGAAATGGACG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245421 12 - 81552678 CAGACATGGATG i nomLeu3.chr19 C 0 T 108 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=9255.000000 s hg38.chr17_GL383563v3_alt 265138 38 + 375691 GACAGAGGGAATGCACATCAGTGTGGGAGGGACACAGA s ponAbe2.chr17 126745 38 + 73212453 GGCAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGA i ponAbe2.chr17 C 0 T 92 s nomLeu3.chr19 245325 37 - 81552678 -GCAGAGGGAATGCACATTGGTGTGGGAGGGACAGAGG i nomLeu3.chr19 T 108 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=77.000000 s hg38.chr17_GL383563v3_alt 265176 3 + 375691 TGC s nomLeu3.chr19 245362 3 - 81552678 AGC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e ponAbe2.chr17 126783 92 + 73212453 T e panTro4.chr17 239906 2767 + 82630442 I a score=3321.000000 s hg38.chr17_GL383563v3_alt 265179 14 + 375691 TGCAGAAATGGAAA s nomLeu3.chr19 245365 14 - 81552678 TGCAGAAATGGACG i nomLeu3.chr19 C 0 I 54 s macFas5.chr16 162093 14 + 80997621 TGCAGAAATGGACG i macFas5.chr16 T 56 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e ponAbe2.chr17 126783 92 + 73212453 T e panTro4.chr17 239906 2767 + 82630442 I a score=21252.000000 s hg38.chr17_GL383563v3_alt 265193 42 + 375691 GCAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTG s ponAbe2.chr17 126691 42 + 73212453 GCAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTG i ponAbe2.chr17 T 92 C 0 s nomLeu3.chr19 245433 42 - 81552678 GCAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTG i nomLeu3.chr19 I 54 C 0 s macFas5.chr16 162107 42 + 80997621 TCAGGGGGAACGCACCTCAGTGTGGGACGGACAGAGGAGCTG i macFas5.chr16 C 0 T 74 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=8940.000000 s hg38.chr17_GL383563v3_alt 265235 40 + 375691 CAGAAATGGACGGGCAGAGGGAATGCACATCAGTGTGGGA s ponAbe2.chr17 126733 40 + 73212453 CAGAAATGGACGGGCAGAGGGAATGCACATCGGTGTGGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245475 39 - 81552678 CAGACATGCAC-GGCAGAGGGAAGGCACATCAGTGTGGGA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 74 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=4644.000000 s hg38.chr17_GL383563v3_alt 265275 15 + 375691 GGGACAGAGGAGC-----TG s ponAbe2.chr17 126773 15 + 73212453 GGGACAGAGACGC-----TG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245514 15 - 81552678 GGGACAGAGGAGC-----TG i nomLeu3.chr19 C 0 T 539 s macFas5.chr16 162075 20 + 80997621 GGGACTGAAGAACACCTGTG i macFas5.chr16 T 74 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=4175.000000 s hg38.chr17_GL383563v3_alt 265290 11 + 375691 CAGAAATGGAC s ponAbe2.chr17 126788 11 + 73212453 CAGACATGGAC i ponAbe2.chr17 C 0 T 383 s nomLeu3.chr19 244990 11 - 81552678 CACACATGGCC i nomLeu3.chr19 T 539 C 0 s macFas5.chr16 162095 11 + 80997621 CAGAAATGGAC i macFas5.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=19966.000000 s hg38.chr17_GL383563v3_alt 265301 43 + 375691 AGCAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGATGCTG s ponAbe2.chr17 126416 43 + 73212453 GGCAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGACGCTG i ponAbe2.chr17 T 383 C 0 s nomLeu3.chr19 245001 43 - 81552678 GGCAGAGGGAATGCACATCAGTGTGGGAGGGACAGGGGAGCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 162106 43 + 80997621 GTCAGGGGGAACGCACCTCAGTGTGGGACGGACAGAGGAGCTG i macFas5.chr16 C 0 T 56 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=1915.000000 s hg38.chr17_GL383563v3_alt 265344 12 + 375691 CAGAAATGGATG s ponAbe2.chr17 126459 12 + 73212453 CAGACATGGACG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245044 12 - 81552678 CACACATGGCCG i nomLeu3.chr19 C 0 I 436 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=451.000000 s hg38.chr17_GL383563v3_alt 265356 6 + 375691 GACAGA s ponAbe2.chr17 126471 6 + 73212453 GGCAGA i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e nomLeu3.chr19 245056 436 - 81552678 I e panTro4.chr17 239906 2767 + 82630442 I a score=8319.000000 s hg38.chr17_GL383563v3_alt 265362 35 + 375691 GGGAATGCACATCAGTGTGGGAGGGACACAGATGC s ponAbe2.chr17 126477 35 + 73212453 GGGAATGCACATCGGTGTGGGAGGGACAGAGATGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245492 35 - 81552678 GGGAAGGCACATCAGTGTGGGAGGGACAGAGGAGC i nomLeu3.chr19 I 436 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 56 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=1146.000000 s hg38.chr17_GL383563v3_alt 265397 2 + 375691 TG s ponAbe2.chr17 126512 2 + 73212453 TG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245527 2 - 81552678 TG i nomLeu3.chr19 C 0 T 473 s macFas5.chr16 162093 2 + 80997621 TG i macFas5.chr16 T 56 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=1216.000000 s hg38.chr17_GL383563v3_alt 265399 12 + 375691 CAGAAATGGA-AA s ponAbe2.chr17 126514 13 + 73212453 CAGAAATGGACAG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 162095 12 + 80997621 CAGAAATGGACG- i macFas5.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e nomLeu3.chr19 245529 473 - 81552678 T e panTro4.chr17 239906 2767 + 82630442 I a score=3291.000000 s hg38.chr17_GL383563v3_alt 265411 8 + 375691 GCAGAGGG s ponAbe2.chr17 126527 8 + 73212453 GCAGAAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245056 8 - 81552678 GCAGAGGG i nomLeu3.chr19 T 473 T 161 s macFas5.chr16 162107 8 + 80997621 TCAGGGGG i macFas5.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=17568.000000 s hg38.chr17_GL383563v3_alt 265419 34 + 375691 AATGCACATCAGTGTGGGAGGGACAGAGGAGCTG s ponAbe2.chr17 126535 34 + 73212453 AATGCACATCGGTGTGGGAGGGACAGAGGAGCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 244903 34 - 81552678 AATGCACATCAGTGTGGGAGGGACAGAGGAGCTG i nomLeu3.chr19 T 161 C 0 s macFas5.chr16 162115 34 + 80997621 AACGCACCTCAGTGTGGGACGGACAGAGGAGCTG i macFas5.chr16 C 0 T 3 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e panTro4.chr17 239906 2767 + 82630442 I a score=13548.000000 s hg38.chr17_GL383563v3_alt 265453 68 + 375691 CAGAAATGGACGGGCAGAGGGAATGCACTTCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGACGG s ponAbe2.chr17 126569 68 + 73212453 CAGAAATGGACGGGCAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGATGCTGCAGAAATGGACGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 244937 66 - 81552678 CAGACATGGCC-GGCAGA-GGAATGCACATTGGTGTGGGAGGGACAGGGGAGCTGCACACATGGCCGG i nomLeu3.chr19 C 0 I 108 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 3 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=100.000000 s hg38.chr17_GL383563v3_alt 265521 1 + 375691 G s ponAbe2.chr17 126637 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 3 + 80997621 T e nomLeu3.chr19 245003 108 - 81552678 I e panTro4.chr17 239906 2767 + 82630442 I a score=64172.000000 s hg38.chr17_GL383563v3_alt 265522 272 + 375691 CAGAGGGAATACACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGACATGAACGGGCAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGAT s ponAbe2.chr17 126638 271 + 73212453 CAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATGG-CAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGACGGGCAGAGGGAATGCACATCGGTGTGGGAGGGACAGAGACGCTGCAGACATGGACGGGCAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGACAGGCAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGACGCTGCAGAAATGGAC i ponAbe2.chr17 C 0 T 110 s nomLeu3.chr19 245111 267 - 81552678 CAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGACGG-CAGAGGGAATGAACATCAGTGTGGGAGGGACAGGGGAGCTGCAGACATGGAT-GGCAGAGGGAATGCACATCCGTGTAAGAGGGACAGGGGAGCTGCAGAAATGGACGG-CAGA-GGAATGCACATCGGTGTGGGAGGGACAGGGGAGCTGCAGACATGGAT-GGCAGAGGGAATGCACATTGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGAC i nomLeu3.chr19 I 108 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 3 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=24895.000000 s hg38.chr17_GL383563v3_alt 265794 107 + 375691 GGACAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGATGGACAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGACATG s ponAbe2.chr17 126799 107 + 73212453 GGGCAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGGAGCTGCAGAAATGGACAGGCAGAAGGAATGCACATCGGTGTGGGAGGGACAGAGACGCTGCAGAAATG i ponAbe2.chr17 T 110 C 0 s nomLeu3.chr19 245378 105 - 81552678 -GGCAGAGGGAATGCACATCTGTGTAAGAGGGACAGAGGAGCTTCAGACATGGAT-GGCAGAGGGAATGCACATCAGTGTGGGAGGGACAGAGGAGCTGCAGACATG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959272 0 - 1291538 C e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 3 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=1085.000000 s hg38.chr17_GL383563v3_alt 265901 8 + 375691 AACGGGCA s ponAbe2.chr17 126906 8 + 73212453 GACGGGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245483 7 - 81552678 CAC-GGCA i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 959272 8 - 1291538 CATGGGCC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e chlSab2.chr16 138533 0 + 75148670 C e papAnu2.chr16 156284 0 + 74645514 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 3 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=26651.000000 s hg38.chr17_GL383563v3_alt 265909 36 + 375691 GAGGGAATGCACATCGGTGTGGGAGGGACAGAGGAA s ponAbe2.chr17 126914 36 + 73212453 GAGGAAATGCACATCGGTGTGGGAGGGACAGAGGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245490 36 - 81552678 GAGGGAAGGCACATCAGTGTGGGAGGGACAGAGGAG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 156284 36 + 74645514 GGGGAAACGCACCTCAGTGTGGGACGGACAGAGGAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 959280 36 - 1291538 AAGGGATCACATATCAGTGTGGGAGGGACAGAGGAG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e chlSab2.chr16 138533 0 + 75148670 C e rheMac3.chr16 156282 0 + 80904711 C e macFas5.chr16 162149 3 + 80997621 T e panTro4.chr17 239906 2767 + 82630442 I a score=403532.000000 s hg38.chr17_GL383563v3_alt 265945 197 + 375691 CTGTCCTCACGGGGCTGGAGGACACAGCCAGGAGCAGCTCCTGGACCAGCTCCACCTTGGTAATGAGATTCAGGATGTCAAGCCCAGAGGCCAGGCGAGTCCCTCACGAGCTCGTTTCCGCCGATGGCTCGCCATGGCCA-CCACCGGT-TGCACCTTCACCTCTGAGGGGCT---GTGGGGG-CAGTCAGAACCCGCAGGGC s ponAbe2.chr17 126950 199 + 73212453 CTGTCCTCACGGGGCTGGAGGGCACAGCCTGGAGCAGCTCCTGGACCAGCTCCACCTTGGTAATGAGACTGAGGATGGCAAGCCCAGAGGCCAAGCAAGTCCCTCACGTGCTCGTTTCCCCCGATGGCTTGCCATGGCCA-CCACCGGTCTGCACCTTCGCCTCTGAGGGGCT---GTGGGGGGCAGTCAGAACCTGCAGGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245526 198 - 81552678 CTGTCCTCACGGGGCTGGAGGACACAGCCAGGGGCAGCTCCTGGACCAGCTCCACCTTGGTAATGAGACTGAGGATGTCAAGCCCAGAGG-CAGGCGAGTCCCTCACGTGCTCGTTTCCACCGATGGCTCGCCATGGCCA-CCACCGGTCTGCACCTTCACCTCTGAGGGGCT---GTGGGGGGCAGTCAGAACCTCCAGGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 156282 199 + 80904711 CTGTCCTTACGGGGCCGGAGGACACAGCCAGGAGCAGCTCCTGGACCAGCCTCAGCTTGGTAACGAGACTGAGGATGTCAAGCCCAGAGGCCAGGCAAGTCCCCCGCGTGCTCGTTTCTGCCGATGGCTCGCCACGGCCACCCCCTGGTCCGCACCTTCGCCTCTGA-GGGCT---GTGGGGGGCAGTCGGAACCTGCAGGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 162146 199 + 80997621 CTGTCCTTACGGGGCCGGAGGACACAGCCAGGAGCAGCTCCTGGACCAGCCTCAGCTTGGTAACGAGACTGAGGATGTCAAGCCCAGAGGCCAGGCAAGTCCCCCACGTGCTCGTTTCTGCCGATGGCTCGCCACGGCCACCCGCTGGTCCGCACCTTCGCCTCTGA-GGGCT---GTGGGGGGCAGTCGGAACCTGCAGGGC i macFas5.chr16 T 3 C 0 s papAnu2.chr16 156320 199 + 74645514 CTGTCCTTACGGGGCCGGAGGACACAGCTAGGAGCAGCTCCTGGACCAGCCCCACGTTGGTAATGAGACCAAGGATGTTAAGCCTAGAGGCCAGGCAAGTCCCCCGTGTGCTCGTTTCTGCCGATGGGTCGCCACGGCCACCCCCTGGTCCGCACCTTCGCCTCTGA-GGGCT---GTCGGGGGCAGTCGGAACCTGCAGTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 138533 199 + 75148670 CTGTCCTTACGGGGCCGGAGGACACAGCCAGGAGCAGCTCCTGGACCAACCCCACGTTGGTAACGAGACTGAGGATGTCAAGCCCAGAGGCCAGGCAAGTCCCCCGCGTGCTCATTTCTGCCGATGGCTCGCCACGGCCACCCACTGGTCCGCACCTTCGCCCCTGA-GGGCT---GTGGGGGGCAGTCAGAACCTGCAGGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 959316 199 - 1291538 CCATCCCCAAGGGGCGGGAGGACGCCACCAGGAGCAGCTCCTGCACCAGCTCCACCTTGGGCACAAGGCCAAGGACATCAAGCCCAGAGGCCAGG-GAGTCCCTTGCATGCTCGTCCC--ACTGTGGCTCATCACGGCCA-CCACCGCTCAGCACCCTCTCCTCTGAGGGGCTCGGGGAGGGGGCGGTCAGAAGCTGCAGGGC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e panTro4.chr17 239906 2767 + 82630442 I a score=323326.000000 s hg38.chr17_GL383563v3_alt 266142 125 + 375691 CCAAAGACGGGCTGTTCAACGTCACGCCCGCTTTTTTCAAACACACAATATTGTTTTGAAACTTCAAGTCACATAT--GAAAAAAAGGGTGTGGAAGGGTT-CTACGTGTATCAAAAGGGAGCCTGGG s panTro4.chr17 242673 124 + 82630442 CCAAAGACGGGCTGTTCAACGTCACGCCCACCTTTT-CTAACACACAATATTGTTTTGAAACTTCAA-TCACATAT--GAAAAAAAGAGTGTGGAAGAGTTTCTACGTGTATCAAAAGAGAGCCTGGG i panTro4.chr17 I 2767 C 0 s ponAbe2.chr17 127149 124 + 73212453 CCAAAGACGGGCTATTCAATGTCATGCCCACTTTTTTCAAACACACAATATTGTTTTGAAACTTCAAATCACATAT---AAAAAAAGGGTGTGGAAGGGTT-CTACGTGTATCAAAAGGGAGCCTGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245724 127 - 81552678 CCAAAGACGGGCTATTCAATGTCATGCCCACTTTTTTCAAACACACAATATTGTTTTGAAACTTCAAATCACATGTGGGAAAAAAAGGGTGTGGAAGGGTT-CTACGTGTATCAAAAGGGGACCTGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 156481 125 + 80904711 CCAAAGACGGGCTACTAAATGTCATGCCCACTTTTTTCAAACACACAATACTGTTTTGAAACTTCAAATCACGTAT--GAAAAAAAGGATTTGGAAGGGTT-CCACGAGTATCCAAAGGGAGCCTGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 162345 125 + 80997621 CCAAAGACGGGCTACTCAATGTCATGCCCACTTTTTTCAAACACACAATACTGTTTTGAAACTTCAAATCACGTAT--GAAAAAAAGGATTTGGAAGGGTT-CCACGAGTATCCAAAGGGAGCCTGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 156519 125 + 74645514 CCAAAGACGGGCTACTCAATGTCATGCCCACTTTTTTCAAACACACAATACTGTTTTGAAACTTCAAATCACGTAT--GaaaaaaaGGATGTGGAAGGGTT-CCACGAGTATCCAAAGGGAGCCTGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 138732 124 + 75148670 CCAAAGACGGGCTACTCAATGTCATGCCCACTTTTTTCAAACACACAATACTGTTTTGAAACTTCAAATCACGTAT--G-AAAAGAGGATGTGGAAGGGTT-CCACAAGTATCCAAAGGGAGCCTGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 959515 124 - 1291538 CCAGAAGCCGGCTGTTCGGTTTCAGGCCCACTGTCTCCAAACACACAACATTGTTTCGAAATTTCAAATCACATCT--G-AAGCAATCATGTGGAAGGACT-CCACGTCTATCAGAAGGGAGGATGGG i calJac3.chrUn_GL286409 C 0 I 1703 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I a score=248827.000000 s hg38.chr17_GL383563v3_alt 266267 105 + 375691 TTTTGAAACGTGGATCAATGCTGCTCTAACGTCCTGCCGGAGAAGGAAAAGGAACCCACCAGCTCCGCTCAGGAGGCCTCTTGGGGGTCTCCAGAATCATCCCCT s panTro4.chr17 242797 105 + 82630442 TTTTGAAACGTGGATCAATGCTGCTCTAACGTCCTGCCGGAGAAAGAAAAAGAACCCACCAGCTCCGCTCAGGAGGCCTCTTGGGGGTCTCCAGAATCATCCCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 127273 105 + 73212453 TTTTGAAACGTGGATCAATGCTGCTCTAACGTCCTGCCGGAGAAGGAAAAGGAACCCACCAGCTCCGCTCAGGAGGCCTCTTGGGGGTCTCCAGAATCATCCCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 245851 104 - 81552678 TTTTGAAACGTGGATCAGTGCTGCTCTAACGTCCTGCTGGAGAAGGAAAAGGAACCCACCAGCTCTGCTCAGGAGGCCTCTTGGAGA-CTCCAGAATCATCCCCT i nomLeu3.chr19 C 0 I 196 s rheMac3.chr16 156606 105 + 80904711 TTTTGAAATGTGGATCAATGCCGCTCCAACGTCCCGCCGCAGAAGGAAAAGGAATCCACCAGCCCTGCTCGGGAGGCCTCTTGGAAGACTCCAGAATCATCCCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 162470 105 + 80997621 TTTTGAAATGTGGATCAATGCCGCTCCAACGTCCCGCCGCAGAAGGAAAAGGAATCCACCAGCCCTGCTCGGGAGGCCTCTTGGGAGACTCCAGAATCATCCCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 156644 105 + 74645514 TTTTGAAATGTGGATCGATGCCGCTCCAACGTCCTGccggagaaggaaaaggaatccACCAGCCCTGCTCGGGAGGCCTCTTGGGAGACTCCAGAATCATCCCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 138856 105 + 75148670 TTTTGAAATGTGGATCAATGCCGCTCCAACGTCCTGCCGGAGAAGGAAAAGGAATCCACCAGCTCTGCTCGGGAGGCCTCTTGGGAGACTCCAGAATCATCCCCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959639 1703 - 1291538 I a score=376551.000000 s hg38.chr17_GL383563v3_alt 266372 167 + 375691 TCAAGCATCCAAGGGGACAAGGCTGGGTCTCGTGGGGCATTGTGTGAGGACAAACCGTAACACCGATTTTCCCCAGGGGGTGAGTGAGGACTGGAAATCAACATGCATCCATAGCCACCCCTCTGCGGAGAGTTCCATCAGGAGCTCTGGAACACAACCCTCTCcaa s panTro4.chr17 242902 167 + 82630442 TCAAGCATCCAAGGGGACAAGGCTGAGTCTCGTGGGGCGTTGTGTGAGGACAAACCGTAACACCGATTTTCCCCCGGGGGTGAGTGAGGACTGGAAATCAACATGCATCCGTAGCCACCCCTCTGGGGAGAGTTCCATCAGGAGCTCTGGAACACAACCCTCTCcaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 127378 167 + 73212453 TCAAGCATCCAAGGGGACAAGGCTGGGTCTCGTGGGGCATTGTGTGAGGACAAACCGTAACACCGATTTTCCCCAGAGAGTGAGTGAGGACTGGAAATCAACATGCATCCGTAGCCACCCCTCTGAGGACAGTTCCATCAGGAGCTCTGGAACACAATCCTCTCCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 246151 167 - 81552678 TCAAGCATCCAAGGGGACAAGCCTGGGTCTCGCGGGGCGTTGTGTGAGGACAAACCGTAACACCGATTTTCCCCAGGGGGTAAGCGAGGACTGGAAATCAACGTGCATCCGTAGCCACCCCTCTGCGAACAGTTCCGTCAGGAGCTCTGGAACACAACCCTCTCcaa i nomLeu3.chr19 I 196 C 0 s rheMac3.chr16 156711 165 + 80904711 TCAAACATCCCAGGGGACAAGCCTGGGTCTCGTGGGGCGTTGTGTGAGGACAAACCGTGACACCGATTCTCCCC-GAGGGTGAGTGAGGACTGCAAATCCACGCGCATCCA-AGCCGTCCCTCTGCGGAGAGTTCCGTCAGGAGCTCTGGCACACAACCCTCTCCAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 162575 165 + 80997621 TCAAACATCCCAGGGGACAAGCCTGGGTCTCGTGGGGCGTTGTGTGAGGACAAACCGTGACACCGATTCTCCCC-GAGGGTGAGTGAGGACTGCAAATCCAAGCGCATCCA-AGCCGTCCCTCTGCGGAGAGTTCCGTCAGGAGCTCTGGCACACAACCCTCTCCAA i macFas5.chr16 C 0 I 861 s papAnu2.chr16 156749 165 + 74645514 TCAAACATCCAAGGGGACAAGCCTGGGTCTCGTGGGGCGTTGTGTGAGGACAAACCGTGACACCGATTCTCCCC-GAGGGTGAGTGAGGACTAGAAATCCACGCGCATCCA-AGCCGTCCCTCTGCGGAGAGTTCCATCAGGAGCTCTGGCACACAACCCTCTCCAA i papAnu2.chr16 C 0 I 859 s chlSab2.chr16 138961 165 + 75148670 TCAAACATCCAAGGGGACAAGCCTGGGTCTCGTGGGGCGTTGTGTGAGGACAAACCGTGACACCGATTCTCCCC-GAGGGTGAGTGAGGACTGGACATCCACGTGCATCCA-AGCCGTCCCCCTGCGGAGAGTCCCGTCAGGAGCTCTGGCACACAACCCTCTCCGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959639 1703 - 1291538 I a score=8400.000000 s hg38.chr17_GL383563v3_alt 266539 3 + 375691 gcc s panTro4.chr17 243069 3 + 82630442 gcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 127545 3 + 73212453 GCC i ponAbe2.chr17 C 0 I 1451 s nomLeu3.chr19 246318 3 - 81552678 gcc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 156876 3 + 80904711 GCC i rheMac3.chr16 C 0 I 3636 s macFas5.chr16 163601 3 + 80997621 gcc i macFas5.chr16 I 861 C 0 s papAnu2.chr16 157773 3 + 74645514 GCC i papAnu2.chr16 I 859 C 0 s chlSab2.chr16 139126 3 + 75148670 GCC i chlSab2.chr16 C 0 I 1027 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959639 1703 - 1291538 I a score=337.000000 s hg38.chr17_GL383563v3_alt 266542 2 + 375691 aa s panTro4.chr17 243072 2 + 82630442 aa i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 246321 2 - 81552678 ta i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 163604 2 + 80997621 ca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 157776 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e calJac3.chrUn_GL286409 959639 1703 - 1291538 I e chlSab2.chr16 139129 1027 + 75148670 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=2345.000000 s hg38.chr17_GL383563v3_alt 266544 2 + 375691 ca s panTro4.chr17 243074 2 + 82630442 cg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 246323 2 - 81552678 cg i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 163606 2 + 80997621 cg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 157778 2 + 74645514 CG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 961342 2 - 1291538 cg i calJac3.chrUn_GL286409 I 1703 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e chlSab2.chr16 139129 1027 + 75148670 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=774994.000000 s hg38.chr17_GL383563v3_alt 266546 550 + 375691 tgatgaagactccacaaaaacccaagacgtcggggcttggggcgattccagatatagc--tgaacacgtggaggttcttgaggggaggccccagaggggatccaacagcccctcgcctatccccacatgccccacccagggcacctctcccatctggcggctgccttgttcatctgtgcactttgtaatat--------------ccttcgtcataaaccagtcaacataagcaaagtgtttctctgcgagttctgtgagccactctagcaaatt-atcgaacccaaagtatgggttgtgggaaccccgattcacagccagctgctcagaagttccagaggtctggacgtgtgactggcatctgaggcgggggacag--tcctgggaccgagccctcgtcctgcgggatctgatgctacctccgggtagacagcgtctgaactga-gcacagcccactggagaatgtgctg-------cggatcgggcgtgggtgggagaaatccacacacatcttggtgaccagaggtcccaggagtgtgctgtgttgagtaactgtaagagaataggaaaaacca s panTro4.chr17 243076 550 + 82630442 tgatgaagactccacaaaaacccaagaggacggggcttggggcgattccagatatagc--tgaacacgtggaggttcctgagcggaggcctcagagggggtccaagagcccctcgcctgtccccacatgccccacccggggcacctctcccatctggcggctgccttgttcatctgtgcactttgtaatat--------------ccttcgtaataaaccagtcaacataagcaaagtgtttctctgcgcgttctgtgagccgctctagcaaatt-atcgaacccaaagtatgggttgtgggaaccccgattcacagccagctgctcagaagttccagaggcctggacgtgtgactggcatctgaggcgggggacag--tcctgggaccgagcgctcgtcctgcgggatctgatgctacctccgggtagacagcgtctgaactga-gcacagcccactggagaatgtgctg-------cggatcgggcgtgggtgggagaaatccacacacatcttggtgaccagaggtcccaggagtgtgctgtgttgagtaactgtaagagaataggaaaaacca i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 246325 551 - 81552678 tgaggaagactccacaaaaacccaagaggacggggctcggggcgattccagatatagc--tgaacacgtggaggttcctgtggggaggccccagagggggtccgagagcccctcgcctgtccccacatgccccacccggggcacctctcccatctggtggctgccttgttcatctgtgcactttgtaaaat--------------cctttgtaataaaccagtcaacataagcaaagtgtttctctgtgagttctgtgagccgctctagcaaatt-attgaacccaaagtatgggtaatgggaaccccgattcacagccagctgctcagaagttct-gaggcctggacgtgtgactggcatctgaggcgggggacggtctcccaggaccgagccctcgtcctgcaggatctgatgctacctccgggtagacagcatctgaattca-gcacagcccactggagaatctgctg-------cagaccgggagtgggtgggagaaatccgcacacatcttggtgaccagaggtcccaggagtgtgctgtgtggagtgactgtaagataataggaaaaacca i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 163608 554 + 80997621 tggcaaagactccacgaaaacccaagaggacggggcttggggagattccagatatatc--tgaacacgtggaggttcccgc-gggaggccccaga-ggggcccgagagcccctcgcccgtccccacgtgccccacccggggctcctctcccatctggaggccgccttgttcatccgtgtactttgtagttt--------------ccttcgtaacaaaccagtcaacacaagcaaagcgtttctctgc-agttctgtgagccgctctagcaaatt-attgaacccaaagtacgggttgtgggaaccccagttcacagccagctgctcagaagttccagaggcctggacgtgcgactggcatc-gaggcgggggacagtctcctggggctgagccctcgtcctgcgggatctgatgctgcctcggggtagacagcgtctgaactga-gcacagcccactggagaatctgctgcggaacacggatggcgagtgggtgggagaaatccgcacacacctcggtgaccggaggtcccaggagcgtgctgtgttgagtgactgtgagagaaga-gaaaaggca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 157780 534 + 74645514 TGGCAAAGACACCACGAAAACCCAAGAGGACGGGGCTTGGGGAGATTCCAGATACAGCTGTGAACACGTGGA-------------------------GGGCCCGAGAGCCCCTCACCCGTCCCCACGTGCCCCACCCGGGGCTCCTCTCCCATCTGGAGGCCGCCTTGTTCATCCGTGTACTTTGTAGTTT--------------CCTTCGTAACAAACCAGTCAACACCAGCAAAGGGTTTCCCTGCGAGTTCTGTGAGCCGCTCTGGCAAATT-ACTGAACCCAAAGTACGGGTTGTGGGAACCCCAGTTCGCAGCCAGCtgctcagaagttccagaggcctggACGTGCGACTGGCATC-GGGGCGGGGGACAGTCTCCTGGGGCCGAGCCCTCGTCCTGCGGGATCTGATGCTACCTCGGGGTAGACAGCGTCTGAACTGA-GCACAGCCCCCTGGAGAACCTGCTGCGGAACACGGATGGCGAGTGGGTGGGAGAAATCCGCACAAACCTCGGTGATCGGAGGTCCCAGGAGCGTGCTGTGTTGACTGACtgtgagagaaga-gaaaaggca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 140156 551 + 75148670 tgacgaagactccaggaaaacccaagaggacggggcttggggagattccagatacagc--tgaacacgtggaggttcccgcggggaggccccaga-ggggcccgagagcccctcacccgtccccacgtgccccacccgcggctcctctcccatctggaggccgccttgttcatctgtgtactttgtagttt--------------ccttcgtaacaaaccagtcaacaaaagcaaagggtttctccgcgagttctgtgagccgctgtagcaaatt-attgaaccaaaagtatgggttgtgggaaccccagttcacagccagctgctcagaagttccagaggcctggacgtgcgactggcatc-ggggcaggggacagtctcctggggccaagccctcgtcgtgcgggat------ctacctcggggtagacagcgtctgaactga-gcacagcccactggagaatctgctgtggaacacggatcacgagtgggtgggagaaatccgcacacatcttggtgaccggaggtcccaggagcgtgctgtgttgagtgactgtaagagaagaggaaaaggca i chlSab2.chr16 I 1027 C 0 s calJac3.chrUn_GL286409 961344 523 - 1291538 taatgaagactccacaaaag-ccaggagggcagaggtt-gggagattccag--acagc--tgaacgcatggaggttcctgc-gggaggcaccagagagggccc-agagcccctcacccgcccccacacgccgcacccg-----------------ggaggctgccttgttcatccacatactttctaatacgggaaggcttaaaacctacatcatacaccagtacacacaagcagagtgtttctctgagagttctgtgagttgctctagcaaattaactgaacacaaagaatggggtgtgggaaccctgatttacagaga-ctgctgagaagttccagaggcctggccgtgtgactggcatccgaggc-gaggacggtcgcctgggatcacaccctcgtc-tgcaggatctgaggccacctgtgggtggatggggtctgaactgGTGTGTGGCCCACTGGAGAATATGCCATGGAA--CGGATCAGGAGAGGGTAGGA------------------------CAGAGGTCGTGGAAGTGTGCTGTAGTGAGTGACTGCAGGGGAACAGGAAAAAACA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75888915 3180 + 122082543 I e canFam3.chr9 15713255 1616 - 61074082 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=46075.000000 s hg38.chr17_GL383563v3_alt 267096 28 + 375691 ctttgcttggtgttttcctCTATTTTCA s panTro4.chr17 243626 28 + 82630442 ctttgcttggtgttttcctCTATTGTTA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 246876 28 - 81552678 ctttgcttggcgttttcctCTATTTTTA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 164162 28 + 80997621 ctttCCCCGGCATTTTCCTCTATTTCTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 158314 28 + 74645514 cTTTCCCCGGTATTTTCCTCTATTTCTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 140707 28 + 75148670 ctttCCCCGGCATTTTCCTCTATTTCTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 961867 28 - 1291538 CTTTGGTTGGCGTTTTCCTCCATTTTTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75892095 26 + 122082543 CCTTGCTTGTTTTTCTCCTC--GTTTTA i mm10.chr11 I 3180 C 0 e canFam3.chr9 15713255 1616 - 61074082 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=791983.000000 s hg38.chr17_GL383563v3_alt 267124 468 + 375691 GAGCCTGATGCCC-AAGACACTGAAGTCCTG--TGCTTC---CGGA--AGGCTTAAAACCTCCCAG-G-AGGGTGAGGCAGCAGCCTCGGTCCTCTCTCCACCATCCCCTTCCCTAGAATCTGGTGAAGAGCA-AGGTTGGTCACAGGTCAGGGCTGATGT-TGCCAAGGGCATTCCGCAAACACTT-GTAAGTCCCCGTTACTCCCGGGCCCTGGACTAGCCAGC--GGACA-GGGAGGCTTCACGAGCTGATGGGGAGAGAGGCAAGAAA-----------------ATGACACACGGACGAACATGCAAA----CT-TCCCTCCCTGGCCCCCAC---CTCTCTCTAGTCCTGTC-CCC--ACCGGCCTTGCCAAGCCCACCACGCCAGCCCCACACTTTGCTGTCCTCTCCCAACCCTCTAGCCACCTCTCTGCCTCCG-------TGCC----CTGTGGCTCACACCTGGCAAACTTCTACACATCCTTCAGGAAC---CCTGAC----ATTTCCTCCTCCATGA s panTro4.chr17 243654 468 + 82630442 GGGCCTGATGCCC-AAGACACTGAAGTCCTG--TGCTTC---TGGA--AGGCTGAAAACCTCCCAG-G-AGGGTGAGGCAGCAGCCTCGGTCCTCTCTCCGCCATCCCCTTCCCTAGAATCTGGTGAAGAGCA-AGGTTGGTCACAGGTCAGGGCTGATGT-TGCCAAGGGCATTCCGCAAACACTT-GTAAGTCCCCGTTACTCCCGGGCCCTGGACTAGCCAGC--GGACA-GGGAGGCTTCACGAGCTGATGGGGAGAGAGGCAAGAAA-----------------ATGACACACGGACGAACATGCAAA----CT-TCCCTCCCTGGCCCCCAC---CTCTCTCTAGTCCTGTC-CCC--ACCGGCCTTGCCAAGCCCACCACGCCAGCCCCACACTTTGCTGTCTGCTCCCGACCCTCTAGCCACCTCTCTGCCTCCG-------TGCC----CTGTGGCTCACACCTGGCAAACTTCTACACATCCTTCAGGAAC---CCTGAC----GTTTCCTCCTCCATGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 246904 469 - 81552678 GGGCCTGATGCCC-AAGACACTGAAGTCCTG--TGCTTC---TGGAAGAGGCTTAAAACCTCCCAG-G-AGGGTGAGGCAGCAGCCTCGGTTCTCTCTGCACCATCCCATCTCCTAGAATTTGGTGAAGAGCA-AGGCTGGTCACAGATCAGGACCAACAT-TGCCAAGGGCATTCCGCAAACACTG-CTAAGTCCCTGTTACTCCCGGGCCCTGGACGAGCCAGA--GGACA-GGGAGGCTTCACGAGCTGATGGGGAGAGAAGCAAGAAA-----------------ATGACACACGGACGCACACACAAA----CT-TCCCTCCCGGGCCCCCAC---CTCTCTCTAGTCCCGTC-CCC--ACTGGCCTTGCCGAGCCCGCCGCACCAGCCTCAC-CTTTGCTGTCTGCTCCCAGCCCTCTAGCCACCTCTCTGCCTCCG-------TGCC----CTGTGGCTCACACCTGGCAAACTTCTACACATCCTTCAGGAAC---CCTGAC----GTCTCCTCCTCCATGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 164190 465 + 80997621 GGGCCTGATGCCC-AAGACGCTAAAGTCCGG--TGCTTC---CGGA--AGGCTGAAAA-CTCCCAG-G-AGGGTG-GGCCGCAGCCTCGGTTCTCTCTCCACCATCCCGTCCCCTGGAATTTGGTGAAGAGCA-GGGTTGGTCACAGGTCAGGGCCAATGT-TGCCAAGGGCATTCCGCAAACACGT-CTAAGTCCCTGTTACCAGCAAGCCCTGGACTAGCCAGA--GGAC--GGGGGGCTTCACGAGCTGATGGGGAGAGAGGCAAGAAA-----------------ACGACACAGGGACACACACGCCAA----CT-TCCCTCCCAGG-CCCCAC-CTCTCTCTCTAGTCCCATC-CCC--ACTGGCCTTGCCAAGCCCACCACGCCAGCCCCAC-ATTTGCTCTCTGCTCCCAACCCTCTAGCCACCTCCCTGCCTCCG-------TGCC----CTGTGGCTCCCACCTGGCAAACTTCTACGCATCCTTCAGGAAC---CCTGAC----GTCTCCTCCCCCATGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 158342 466 + 74645514 GGGCCTGATGCCC-AAGATGCTAAAGTCCGG--TGCTTC---CGGA--AGGCTTAAAA-CTCCCAG-G-AGGGTG-AGCCGCAGCCTCGGTTCTCTCTCCACCATCCCGTCCCCTGGAATTTGGTGAAGAGCA-GGGTTGGTCACAGGTCAGGGCCAATGT-TGCCAAGGGCATCCCGCAAACACGT-CTAAGTCCCTGTTACCAGCGGGCCCTGGACTAGCCAGA--GGAC--GGGGGGCTTCACGAGCTGATGGGGAGACAGGCGAGAAA-----------------ACGACACAGGGACACACACGCCAA----Ct-tccctccca-g-ccccac---ctctctcTAGTCCCACC-CCC--ACTGGCCTTGCCAAGCCCACCACGCCAGCCCCAC-ATTTGCTCTCTGCTCCCAACCCTCTAGCCACCTCCCTGCCTCCG-------TGCC----CTGTGGCTCCCACCTGGCAAACTTCTACGCATCCTTCAGGAAC---CCTGACGTCTGTCTCCTCCCCCGTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 140735 464 + 75148670 GGGCCTGATGCCC-AAGACGCTAAAGTCCGG--TGCTTC---CGGA--AGGCTGAAAA-CTCCCAG-G-AGGGTGAGGCCGCAGCCTCGGTTCTCTCTCCACCAACCCATCCCCTAGAATTTGGTGAAGAGCA-GGGTTGGTCACAGGTCAGGGCCAATGT-TGCCAAGGGCATTACGCAAACACGT-CTAAGTCCCTGTTACTAGCGGGCCCTGGACTAGCCAGA--GGAC--GGGGGGCTTCACGAGCTGATGGGGAGAGAGGCAAGAAA-----------------ACGACACAGGGACACACACGCCAA----CT-TCCCTCCCAGG-CCCCAC---CTCTCTCTAGTCCCATC-CCC--ACTGGCCTTGCCAAGCCCACCGCGCCAGCCCCAC-ATTTGCTCTCTGCTCCCAACCCTCTAACCACCCCCCTGTCTCCG-------TGCC----CTGTGGCTCCCACCTGGCAAACTTCTACGCATCCTTCAGGAAC---CCTGAC----ATCTCCTCCCCTATGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 961895 469 - 1291538 GGGCCTGATCCCC-AAGACACTTAAGTTCTG--TGCTCC---GGGA--AGGCTTAAAACCTCCCAG-T-AGGGTGAGGCAGCAGCTGAGGCTCTCCTGCCACCACCCCGGACCCTAGAATTTGGTGAAGAGCA-AAGGTGGTCACGGGTCAGGGCCAATGC-TGCCAGTAGCCTTCTACAGACACTT-CTAAGTGCCTGTGACTACCAAG--CTGAACTAGGCAGA--CGTCA-GGGAGGCTTCGTGAGCAGATGGGGAGAGGAG--AGAAA-----------------ATGACACACGGACACACACGCAAAccttcc-tccctccctggcccccac---ctctctctcatctcgtc-ccccgcccggccttgccaagctcagcacgccggccccacacttggctgtctgctcccaaccctctagctacttc-ctgtctcca-------tcct----ctgtgcctcatgcctggcaaacttctatacatcctgcaggaac---tccagc----atctcctcctccatga i calJac3.chrUn_GL286409 C 0 I 1272 s mm10.chr11 75892121 462 + 122082543 GGGCCTGATCCTC-AGAACAGGGACACCAAGCTTGCTTT---TGGC--GGCTTCATAGTCTTCGTGTG-AGGGTGGAATAGGAGCCTGTGCTAACTCT-CGCCATCT--ATACCCGGAATTTGGATAATGGTATCAGTTG-----AGCTCAGGGACAATG-----------------------------------------ACATTGAAGCTCCAGATTAAACAGAAGGGACACAATAAGGTCCATTGGCTGCTGGGGAGAGAGACAGTAGACTTCTAGACATGTAGACAGGGGACTGGGAGAAGGAGAGAGA----CTCTTCCTGTTTGG-TCCTGCTTTCTCTCCCCAGCCTTGTCTCTC--TCTCAGCTCACCAAGCCCGTCACACTAGCCTCATGGTTTATCATCTACTCCCATCTCTGTGGAGACTCTCCTGTCTCCAAGGGTTTTGTCCAGGCTGAGCCTCATGCCTGGCAAACATCTTCACACCCTTATGGCAC-ATCCGAAA----ATCTCCTCCTCCCTTG i mm10.chr11 C 0 C 0 s canFam3.chr9 15714871 426 - 61074082 GGGCCTAACCTCCAAAGACCCTGATGTCACA--ACCCCCAGTTGGA--AGGCTTGAAATCTTTATG-GTAAGGTGAGTG------TTCTGTTAAGCCTCCACCATCCCTTTCCTTAGAATTTGGTGGGCAGCG-ATCTTAGCTGCAGGCCAGAGATAATGCAGGTCAAGGGGGttcaataaacacttcccaaggccctgctactgccaggtcctgggccaggctacaagcaca-gtgAGGCTTCC----------GGCAGAGAGAAAAGAAA--------------------------------ACACGCACA----CA-CCCCTG--AGAATctggc---ccctccttaa--------ctc--ttcagcccctccaagcccaccc--cctgccccac-------tgtctgcttccaacactctagggacttacgtgc------------tttt----tcttgcttcatgcctagcaaacttttgtgtatccttcaggcacaatgcaagt----atctcctcctccaagg i canFam3.chr9 I 1616 C 0 e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=6819.000000 s hg38.chr17_GL383563v3_alt 267592 3 + 375691 CCC s panTro4.chr17 244122 3 + 82630442 CCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 247373 3 - 81552678 CCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 164655 3 + 80997621 CCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 158808 3 + 74645514 CCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 141199 3 + 75148670 CCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75892583 3 + 122082543 CTC i mm10.chr11 C 0 I 1491 s canFam3.chr9 15715297 3 - 61074082 ctc i canFam3.chr9 C 0 I 1066 e calJac3.chrUn_GL286409 962364 1272 - 1291538 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=1287.000000 s hg38.chr17_GL383563v3_alt 267595 3 + 375691 AGT s panTro4.chr17 244125 3 + 82630442 AGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 247376 3 - 81552678 AGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 164658 3 + 80997621 AGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 158811 3 + 74645514 AGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 141202 3 + 75148670 ACG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75892586 1491 + 122082543 I e canFam3.chr9 15715300 1066 - 61074082 I e calJac3.chrUn_GL286409 962364 1272 - 1291538 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=4200.000000 s hg38.chr17_GL383563v3_alt 267598 2 + 375691 GC s panTro4.chr17 244128 2 + 82630442 GC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 247379 2 - 81552678 GC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 164661 2 + 80997621 GC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 158814 2 + 74645514 GC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 141205 2 + 75148670 GC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 963636 2 - 1291538 GC i calJac3.chrUn_GL286409 I 1272 C 0 e mm10.chr11 75892586 1491 + 122082543 I e canFam3.chr9 15715300 1066 - 61074082 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=493919.000000 s hg38.chr17_GL383563v3_alt 267600 268 + 375691 CAGGGTCCACCAGAAACTGAGTCAGCA-CAG--ACCACCCAGCCAAAGTCAGGAGACCGTCCACGTCCTCCAGCTCTGCCCCCACCAGCTCAGTGTGGGGTGCTGGGGCCCCTCAGTAGCCCTCCCCCGA-CCCCAATCTCAGGGGTAGAGCACCGGCCTCTCTGATGTTCCAGGATTATCATAACTCTTAAAAGGTCAGTCC--GTAAAAATACCCTCTCCCTTCCCTGTGTTCGTTCCCATGCCTGGGATACAGTCAACAGTCTCCAAGCCA s panTro4.chr17 244130 266 + 82630442 CAGGGTCCACCAGAAACTGAGTCAGCA-CAG--ACCACCCAGCCAAAGTCAGGAGACCGTCCACATCCTCCAGCTCTGCCCCTACCAGCTCAGTGTGGGGTGCTGGGGCC--TCAGTAGCCTTCCCACGA-CCCCAATCTCAGGGGTAGAGCACCGGCCTCTCTGATGTTCCAGGATTATCATAACTCTTAAAAGGTCAGTCC--GTAAAAATACCCTCTCCCTTCCCTGTGTTCGTTCCCATGCCTGGGATACAGTCAACAGTCTCCAAGCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 247381 266 - 81552678 CAGGGTCCACCACAAACTGAGTCAGCA-CAG--ACCACCCAGCCAAAGTCAGGAGACCGTCCACGTCCTCCAGCTCTGCCCCCACCAGCTCAGCGTGGGATGCTGGGGCCCCTCGGTAGCCCTCCCC--A-CCCCAATCTCAGGGGTAGAGCACCGGCCTCTCTGATGTTCCAGGATTATCATAACTCTTAAAAGGTCAGTCC--GTAAAAATACCCTCTCCCTTCCCTGTGTTCGTTCCCATGCCTGGGATACAGTCAACAGTCTCCAAGCCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 164663 265 + 80997621 CAGGGTCCACCAGAAAACGAGTCAGCA-CAG--ACCACCCGGCCAAAGTCAGGAGACGGTCCACGTCCTCCAGCTCTGCCCCCACCAGCTCAGCGTGGCGGGC-GGGGCCCCTCGGTAGCCCTCCCC--ATCCCCAATCCC-GGGGTAGAGCACTGGCCTCTCTGATGTTCCAGGATTATCACAACTCTGAAAAGGTCAGTCT--GTAAAAATACGCTCTCCCTTCCCTGTGTTCGTTCCCACGCCTGGGAGACAGTCAACAGTCTCCAGGCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 158816 262 + 74645514 CAGGGTCCACCAGAAAACGAGTCAGCA-CAG--ACCACCCGGCCAAAGTCAGGAGACTGTCCACGTCCTCCAGCTCTGCCCCCACCAGCTCAGCGTGGCGGGC-GGGGCCCCTCGGTAGCCCTCCCT--A-CCCCAATCCC-GGGGTAGAGCACTGGC--CTCTGATGTTCCAGGATTATCACAACTCTGAAAAGGTCAGTCC--GTAAAAACACGCTCTCCCTTCCCTGTGTTCGTTCCCACGCCTGGGAGACAGTCAACAGTctccaggcca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 141207 248 + 75148670 -----------------CGAGTCAGCA-CAG--ACCACCCGGCCAAAGTCAGGAGACGGCCCACGTCCTCCAGCTCTGCCCCCACCAGCTCAGCGTGGCGGGC-GGGGCCCCTCGGCAGCCCTCCCC--A-CCCCAATCCCGGGGGTAGAGCACTGGCCTCTCTGATGTTCCAGGATTATCACAACTCTGAAAAGGTCAGTCC--GTAAAAATACGCTCTCCCTTCCCTGTGTTCGTTCCCACGCCTGGGATACAGTCAACAGTCTCCAAGCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 963638 266 - 1291538 CAGGATCCATCAGAAATGGAGTCAGCA-CAG--ACCACCTGGGCAAAGTTGGGAGACTCTCCACGTCCTCCAGCTTTGCCCTGACCAGCTCAGCGTGGGACACTGGGGCCGCTCAGCAGCCCTCCCC--A-CCCCACTCTCAGGGGTAGAGCACCAGCCTCTCTGACGTTGCAGAATTATCATAACTTTTAAAAGCTCAGTCT--GTAAAACTGCCCTCTCCCTTCCCTGTGTTCTTTCCCATGCCTAGGATACAGTCACTATTCTCCAAGCCA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15716366 253 - 61074082 CAGGGTCCGACAGAAGCCAAGCCAGCAGCAGCTGCTCCCTGGTGAAAGTCAGGAGACCCCAGCCGTCCCCCAGCCCTGCCCCCACCAACTCAGCATAAGACATTCTGGCCTCTCGGGAGCCCCCACC--T-TCC--ATCTGGGGGTTAGG--ACTGCCTTCTCTGACTTTGCAGGATTATCGTAGCTCTCCAAAGGTCAGTTTAAGTGAAAATACCCTTTCCC--------------TCCAGTGCCTGGGACACAGTAAACATCCTTGAAGCCA i canFam3.chr9 I 1066 I 4 e mm10.chr11 75892586 1491 + 122082543 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=514744.000000 s hg38.chr17_GL383563v3_alt 267868 321 + 375691 ggctgggcacggtggctcacgcctgtaatcctggcattttgggaggctgaagtgggcagatcacttgaggtcaggagtttgagaccagcctggtcaatacagcgaaaccccatctctactaaaaatac----aaaaa-aaaaaaaaattagccaggcatggaggcacactcctgtagccctagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagccgagatcaggccactgcgctccagcctgggtgacaaagggagacgttatctc-------aaaaaaaaacaaaaaaa--TTCCCAGCCAGCA s panTro4.chr17 244396 323 + 82630442 ggctgggcacggtggctcatgcctgtaatcctggcattttgggaggctgaagtcggcagatcacttgaggtcaggagtttgagaccagcctggtcaatacagcgaaaccccatctctactaaaaacac----acacacaaaaaaaaattagccaggcatggaggcacactcctgtagccctagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcggtgagccgagatcaggccactgcgctccagcctgggtgacaaagggagacgttatctc-------aaaaaaaaaaaaaaaaaa-CTCCCAGCCAGCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 247647 321 - 81552678 ggctgggcacggtggctcatgcctgtaatcccggcattttgggaggctgaggtaggcagatcacttgcggtcaggagtttgagactagcctcgtcaatacagcaaaaccccatctctactaaaaatac----aacaa-caaaaaaaattagccaggcatggaggcgtgctcctgtagtcccagctactcgggaagctga-gcaggagaatcactcgaacccgggaggcagaggttgtggtgagccgagatcacgccactgcacgccagcctgtatgacaaa-ggagaggctatctc-------aaaaaaaaaaaaaaaaaaCCTCCCAGCCAGCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 164928 319 + 80997621 ggctgggcacagtggctcatgcctgtaatcccggcattttgggaggctgaggtgggcagatcacttgaggtcaggagttggagaccagcctggtcaatacagcgaaaccccatctctactaaaaatac--caaaaaa-aaaaaaaaattagccaggcatggaggcacgctcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcagtgagcccagatcaggccactgcactccagccggggtgacaaagggagacgctgtttc------------aaaaaaacaaaaa-CTCCCAACCAGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 159078 321 + 74645514 ggctgggcacggtggctcatgcctgtaatcccggcattttgggaggctgaggtgggcagatcacttgaggtcaggagttggagaccagcctggtcaatacagcgaaaccccatctctactaaaaatacaaaaaaaaa-aaaaaaaaattagccaggcatggaggcacgctcctgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagcccagatcaggccactgcactccagccggggtgacaaagggagacgctgtttc------------aaaaaaacaaaaa-ctcccaaCCAGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 141455 327 + 75148670 ggctgggcacggtggctcatgcctgtaatcccggcattttgggaggctgaggtgggcagatcacttgaggtcaggagttggagaccagcctggtcaatacagcgaaaccccatctctactaaaaatac------caa-aaaaaaaaattagccaggcatggaggcacgctcctgtcatcccagctactcaggaggctgaggcaggagaatcacttgaaccggggaggcggaggttgcagtgagctcagatcaggccactgcactccagcctgggtgacaaagggagacgctgtctccaaaaaaaaaaaaaaaaaaaaaaaa-CTCCCAGCCAGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 963904 316 - 1291538 ggctgggcatggtggctcatgcctataatcacagcattttaggaggctgaggtgggccgatcacttgaggtcagaagtgtgagaccagcctggccaatatagcaaaaccccatctctactaaaaatac-------cc-aaaaaaaaattagccaggcatggtggcatgcacctgtagtcccagctattcgggaggctgagtcaggagaactgcttgaacccgggaggcagaggttgcagtaggctgatatcaggccactgcacgccaacctg-gtgacagagggagactccatctc-------aaaaacaaaaccaaaaaa---TCCAGCCAGCA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75892586 1491 + 122082543 I e canFam3.chr9 15716619 4 - 61074082 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=49840.000000 s hg38.chr17_GL383563v3_alt 268189 32 + 375691 AATACATGTTATTGGAACTTA--------TCTTTTATCTG- s panTro4.chr17 244719 32 + 82630442 AATACATGTTATTGGAACTTA--------TCTTTTATCTG- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 247968 32 - 81552678 AATACATATTATTTGAACTTA--------TCTTTTATTTG- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165247 33 + 80997621 AATACAAGTTATTGGGACTTA-------TTTTTTTATTTG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 159399 33 + 74645514 AATGCAAGTTATTGggactta-------tttttttatttg- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 141782 33 + 75148670 AATACAAGTTATTGGGACTTA-------TTTTTTTATTTG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964220 32 - 1291538 AATACCTGTCATTGGAACTTA--------TTTTTCCTTTG- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15716623 41 - 61074082 AATACCTGTTGTTGGAACCAATTTTTTTTTTTTTTACTTGA i canFam3.chr9 I 4 C 0 e mm10.chr11 75892586 1491 + 122082543 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=511910.000000 s hg38.chr17_GL383563v3_alt 268221 292 + 375691 AAAAATACAGCAGACTAGACAAACATTGTAGGATTTCTTAATATTCTAACAGCAACAGCACACTAGCGATCCCTTAGGGACCCTG--GTTATGCACAGAACGGAGCTCCAAGGAGGG----GGACGGCAGGTCGGGGCCGGG-GGAGCCAGGCCTGGCCCT-GGGCCTTAGAAATCCCAGCT--GGGGATTTCACTCACGCTGCTCAAGTCAGCAGG---------CTGCAGCTGGGGAATGAACTGAGGGCCTCGGATACCACGTGGGGGTGTTTTCGACTTTATGCTGC--TGGCAGTAGGGAGCCACTGA s panTro4.chr17 244751 290 + 82630442 AAAAATATAGCAGACTAGACAAACATTGTAGGATTTCTTAATATTCTAACAGCAACAGCAC--TAACGATCCCTTAGGGACCCTG--GTTATGCACAGAACGGAGCTCCAAGGAGGG----GGACGGCAGGTCGGGGCCGGG-GGAGCCAGGCCTGGCCCT-GGGCCTCAGAAATCCCAGCT--GGGGATTTCACTCACGCTGCTCAAGTCAGCAGG---------CTGCAGCCGGGGAATGAACTGAGGGCCTCGGATACCACGTGGGGGTGTTTTCGACTTGATGCTGC--TGGCAGTAGGGAGCCACTGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248000 289 - 81552678 AAAAATATAGCAGACTAGACAAAGATTGTAGGATTTCTTAATCTCCTAACAGCAACAGCAC--TAACGATCCCTTAGGGACCCTG--GGGATGCACAGAACGGAGCTCCAAGGAGGG----GGACGGCAGGTGGGGGCCGGG-GGAGCCAGGCCTGACCCT-GCGCCTTAAAACTCCCAGCT---GAGATTTCACTCTCGCTGCTCAAGTCAGCAGG---------CTGCAGCCAGGGAATGAACCGAGGGCCCCGGGTACCATGTGGGGGTGTTTCAGACTTTATGCTGC--AGGCAGTAGGGAGCCACTGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165280 289 + 80997621 AAAAATGCAGCAGACTAGATAAGAATTGCAGGATTTCTTAATATTCTAACAGCAACGGCAC--TAACGATCCCATAGGGACCT----GCTATGCACAGAACAGAGCTCCAAGGAGGC----GGACGGCAGGTCGGGGCTGGG-GGAGCCAGGCCTGGCCCT-GGGCCTCAGAACTCCCAGCA--GCGGACTTCACTCACACGGCTCGAGTCAGCAGG---------CTGCAGCCAGGGAAGGAGCTAAGGGCCTTGGG-ACCTCGTGGGGGTGTTTTAGAGTTGATGCTGCAGAGGCAGCAGGGAGCCACTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 159432 272 + 74645514 aaaaatgcagCAGACTAGACAAGAATTGCAGGATTTCTTAATATTCTAACAGCAACGGCAC--TAACGATCCCATAGGGACCT----GCTATGCACAGAACGGAGCTCCAAGGAGGC----GGACGGCAGGTCGGGGCCGGG-GGAGCCA-GCCTGGCCCT-GGGCCTCAGAACTCCCAGCA--GCAGATCTCACTCACGC--------------GG---------CTGCACCCAGGGAAGGAACTGAGGGCCTTGGG-ACCTTGTGGGGGTGTTTTAGAGTTGATGCTGC--AGGCAGCAGGGAGCCACTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 141815 278 + 75148670 AAAAATGCAGCAGACTAGACAAGA--------ATTTCTTAATATTCTAACAGCAACGGCAC--TAACGATCCCATAGGGACCT----GCTATGCACAGAACAGAGCTCCAAGGAGGC----GGACGGCAGGTTGGGGCCGGG-GGAGCCAGGCCTGGCCCT-GGGCCTCAGAACTCCCAGCA--GCGGATTTCACTCATGAGGCTCGAGTCAGCAGG---------CTGCAGCCAGGGAAGGAACTGA-GGCCTTGGG-ACCTGGTGGGGGTGTTTTAGGGCTGATGCTGC--AGGCAGCAGGGAGTCACTGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964252 289 - 1291538 AAAAATACAGCAGACTAGACAG--ATTGTAGGATTTCTTAACATTCCAACAGCAACAGCAC--TAACGCTCCCTTGTAGACCCTG--GAGATGCATGGA--GGAGCTCCAAGGAGGGAACAGGTCGGCAGGTCGGGGCTAGG-GGAATCAGGCCTGGCCCT-GGGCCTTAGAACTCCCAGCT--GGGAGTTTCACCTGTGCTGCT-AAGTCAGCAGG---------CTGCAGTCAGGGAATGAACTGagggccctggataccatgggggggtgttttagagtttacgctat--gggcagtagggagccactga i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75894077 277 + 122082543 AAAAATCCAGCAGACCAGACAAACATCCCAGAGCTTC-TAACAGTCTG--GGTAAT-GTGC--TAATGGCTAATTAGGGACCCTG--GTGATGGCAGGCCTGAAGCTCTGTGGGAAA----CAATGACAAGACAGGGTCAGGTGGAGACAGACC---CACT-GGGT-------------GGA--GTTAGTGCCAATTATGCTAGA-AAGTCAACAAGCAGCTCCCACTGCCCCCACAGAAGGAGGCAGAGGCCCTGGC-ACCATGTAGAGG-ATTTTAGACTTTGTTCTAC--ATACAGTAGGGAGTCACGGA i mm10.chr11 I 1491 C 0 s canFam3.chr9 15716664 271 - 61074082 AAAAATACAGCAGGCTAGACAAACACCCCAGGGCTTCAAAACATTCCAGGAGCAGCAGCAC--TAATAATTGAGAAGGGGCCCTGATGGGGTGCA-GGAACAGAGCACCAAGGGGAG----T---------------------GGAGCCAGGCCCAATCCTCAGGCCTCAGAACTCCCAGCACAGGGGGTTTGTCTC-TGTTGCTCAAGTCAGCAGT---------TTGTGCCCAGGGAACAAACTGA-GGCCCTGGATACCATACGGGGATGGTT-AGACTTTATTCTGT--AGGCAGTAGGGAGCCATCAA i canFam3.chr9 C 0 I 94 e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=124094.000000 s hg38.chr17_GL383563v3_alt 268513 70 + 375691 AGGCTTCGGGGGGAGGGAGGGGGACAGTGACCTAATCGGAGCTGCACTTGAACAAGC---AGAGGAGTAGAGG s panTro4.chr17 245041 70 + 82630442 AGGCTTCGGGGGGAGGGAGGGGGACAGCGACCTAATCGGAGCTGCACTTGAACAAGC---AGAGGAGTAGAGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248289 70 - 81552678 AGACTTCAGGGGGAGGGAGGGGGACAGTGACCTAATCAGAGCTGCACCTGAACAAGC---AGAGGAGTAGAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165569 73 + 80997621 AGACTTTGGGGGGAAGGAGGGAGACAGTGACCTGACCAGAGCTGCGTTTGAACAAGCAAGAGAGGAGCAGAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 159704 73 + 74645514 AGACTttggggggaaggagggagacagTGACCTGACCAGAGCTGCGTTTGAACAAGCAAGAGAGGAGCAGAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142093 73 + 75148670 AGACTTTGGGGGGAAGGAGGGAGACAGTGACCTGACCAGAGCTGCATTTGAACAAGCGAGAGAGGAGCAGAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964541 70 - 1291538 agacttcaggggagaggaaggagacagtgacctaatcagagctgcatttgaacaagC---AGAGGAGTGGAGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75894354 64 + 122082543 AGGCTTCAGGGAGACTCAGAG----AATGGTGTGAGCAGAGCAAGATGTAAGAGGGC-----AGGAGCAGAGA i mm10.chr11 C 0 C 0 e canFam3.chr9 15716935 94 - 61074082 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=228436.000000 s hg38.chr17_GL383563v3_alt 268583 175 + 375691 ATGCACTGGAAAGCGA----ATGAGACTCGTCCA----CAGTCTGGAACCCAGTGG---GGGCCCTGCAATGGCCC------AGCAGCCCCTCCCCT-G-------------ggttg-----------------------gcaacccagg-tactca------ggcctcactccctgcagggcccgaat--------------gccgctgc---------------------tgtctgagcctgtatgtggttcctgggcagaagggtctc s panTro4.chr17 245111 175 + 82630442 ATGCACTGGAAAGCGA----ATGAGACTCGTCCA----CAGTCTGGAACCCAGTGG---GGGCCCTGCAATGGCCC------AGCAGCCCCTCCCCT-G-------------GGTGG-----------------------GCaacccagg-tactca------ggcctcactccctgcggggcccgaac--------------gccgctgc---------------------tgtctgagcctgtatgtggttcctgggcagaagggtctc i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248359 175 - 81552678 ATGGACCGGAAAGCGA----ATGAGACTCATCCA----CAGTCTGGAACCCAGTGG---GGGCCCTGCAATGGCCC------AGCAGCCCCTCCCCT-G-------------ggttg-----------------------acaacccagg-tgctca------ggcctcactccctgcagggcccgaac--------------gccgctgc---------------------cgtctgagcctgtgtgtggttcctgggcagaagggtctc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165642 172 + 80997621 ACCGGCTGCAAAGCAA----AGGAGACTCATC------CAGTCTGGAACCCAGT-G---GGGCCCTGCAATGGCCC------AGCAGCCCCTCCCCT-G-------------GGTTG-----------------------GCAACCCGGG-TGCTCC------GGCCTCAATCCCTGCAGGgccccaac--------------gccgctgc---------------------tgtctgagtctgtatatggttcttggttagaacggtctc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 159777 172 + 74645514 ACTGGCTGGAAAGCAA----AGGAGATTCATC------CAGTCTGGAACCCAGT-G---GGGCCCTGCAATGGCCC------AGCAGCCCCTCCCCT-G-------------GGTTG-----------------------GCAACCCGGG-TGCTCC------GGCCTCACTCCCTGCAGGGCCCGAAC--------------GCCGCTGC---------------------TGTCTGAGTCTGTATATGGTTCTTGGTTAGAAGGGTCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142166 174 + 75148670 ACGGGCTGGAAAGCAA----AGGAGACTCATC------CAGTCTGGAACCCAGTGG---GGGCCCTGCAATGGCCC------AGCAGCCCCTCCCCTGG-------------GGTTG-----------------------GCAACCCAGG-TGCTCC------GGCCTCACTCCCTGCAGGGCCCGAAC--------------GCCGCTGC---------------------TGTCTGAGCCTGTATATGGTTCCTGGAGAGAAGGGTCTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964611 151 - 1291538 ATGGGCTGGAAAGCAA----ATGAGTCTCCTC------CA----------------------CCCAGCAACAGCCC------AGCAGCCCTCCCCCG----------------ATTG-----------------------GCAACTCAGG-TGCTCA------GGCCACACTCCCTGCA-GGCCTGAAT--------------ACCACTGC---------------------TGTCTGAGCCTCAACACCATTCCTGGGCAGAAGAGtctc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75894418 262 + 122082543 CTGAGCCGGGAAGTAGAGCCAGACAGCTCGGCCC----TTTCCCTGCACCCAGGGGCGTGGGTCTCATA----CCCTATAGGACCAACTTCACTCCT-GCCTACATGGTGGTGGTGGTGttcgagtcaggatttctctgtgcagccctggctgccccacaactggctctgttctctgctcgcctcaaactcagaggttcacctgcctctgccttcgagtactacccagctcttgcctgcgtctgaacATGGTTTCTAAGAAGGCATGTCTC i mm10.chr11 C 0 I 45 s canFam3.chr9 15717029 112 - 61074082 ATTTGCTGGAAAGCAA----ATGAGACTCTACTATAAGCAGGCAGGAACTGGGCGG---GGA---------GGCCC-----------------CACT-G-------------GG--------------------------GCAACCC----CACTCC------TG--------------------------------------GCCA-------------------------TGTCTGGA---------AACTCC----CAGAGGGGTCTC i canFam3.chr9 I 94 C 0 e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=70531.000000 s hg38.chr17_GL383563v3_alt 268758 34 + 375691 ----a--------------------cccttctcag---cctcagtttatccatctgtaacc s panTro4.chr17 245286 34 + 82630442 ----a--------------------cccttctcag---cctcagtttatccatctgtaacc i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248534 34 - 81552678 ----a--------------------cccttctcag---cctcagtttatccatctgtaacc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165814 34 + 80997621 ----a--------------------cccttctcag---cctcagtttatccatctgtaacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 159949 34 + 74645514 ----g--------------------cccttctcag---cctcagtttaTCCATCTGTAACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142340 34 + 75148670 ----a--------------------cccttctcag---cctcagtttatccatctgtaacc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964762 54 - 1291538 ----agccttctcagcccttctcaccccttctcag---ccTCAGTTTATCCATCTGTGACC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15717141 41 - 61074082 AGGAA--------------------CTCCTCTTGGCCTCCTCAGCTTCTCCATCTGTCACC i canFam3.chr9 C 0 C 0 e mm10.chr11 75894680 45 + 122082543 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=38248.000000 s hg38.chr17_GL383563v3_alt 268792 24 + 375691 tggggc---agacc----cctccctccctcc s panTro4.chr17 245320 24 + 82630442 tggggC---AGACc----cctccctccctcc i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248568 24 - 81552678 tggggc---agaat----cctccctccctcC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165848 24 + 80997621 tggggc---agaat----cctccctccctcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 159983 24 + 74645514 TGGGGC---Agaat----cctccctccctcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142374 28 + 75148670 tggggc---agaatcctccctccctccctcc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964816 18 - 1291538 TGGAGC---AGAAT----CCTCCCT------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75894725 27 + 122082543 TGGGGCTAGAGACC----CTCCCCTTCCACC i mm10.chr11 I 45 I 144 s canFam3.chr9 15717182 14 - 61074082 TGGG-----AGAGT----CATCC-------- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=112284.000000 s hg38.chr17_GL383563v3_alt 268816 72 + 375691 ct--------cccacggAAGGCAGG---ACAAGGGTAAGAGGAGAGTCTGGAAGGAGAG------GGCT--AAAGGGGCCTCCGGTGAGGG s panTro4.chr17 245344 76 + 82630442 ctt----cctcccACGGAAGGCAGG---ACAAGGGTAAGAGGAGAGTCTGGAAGGAGAG------GGCT--AAAGAGGCCTCCAGTAAAGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248592 80 - 81552678 GTTCCTCCCTCCCATGGAAGGCAGG---ACAAGGGTAAGAGGAGAGTCTGGAAGGAGAG------GGCT--AAAGAGGCCTCTGATAAAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165872 73 + 80997621 ct--------cccatggGAGGCAGGACAACAAGGGCAAGAGGAGAGTCTAGAAGGAGAG------GGCC----AGAGGCCTCCGACAAAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160007 73 + 74645514 ct--------cccatggGAGGCAGGACAACAAGGGTAAGAGGAGAGTCTGGGAGGAGAG------GGCT----AGAGGCCTCCGACAAAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142402 73 + 75148670 ct--------cccatggGAGGCAGGACAACAAGGGTAAGAGGAGAGTCTGGAAGGAGAG------GGCC----AGAGGCCTCCAACAAAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964834 73 - 1291538 ----------CCCATGGAAAGCAGGACAACAAGGGTAAGAAGAGAGCCTTGAAGGAGAG------AGCT--AAAGAGGCCTCTGATGAAGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15717196 83 - 61074082 --------CTCCCACGAAAGGTGGGGTGATAAGGGTGAGGAATGGGCTTGGAATGGAAGTTACGAAGCCCCCAAGCTGTCTCTGAGAAAGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75894752 144 + 122082543 I e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=362212.000000 s hg38.chr17_GL383563v3_alt 268888 224 + 375691 CCTGATTCT----CAGTGTTGAGGCCCAGGCTAAAAGGACCCTGGGGGAAATGAACCCGCTCCCTCTTTTCCA--------------CTCAGCTTCCCCATCAGCAGAAGAGCTGCCCCCCGTGTCCTCCCACAGGGAACAAG---ACGGGCCAAGTCCATCCCCAGTTAAGGTCCGTGAACAGCAAACAGCT-GCAGGGAAATGTCCCAG-CGGGAAGCACAGGGGCGACTGGAGGCCGGTG-AAGA s panTro4.chr17 245420 224 + 82630442 CCTGATTCT----CAGTGTTGAGGCCCAGGCTAAAAGGACCCTGGGGGAAATGAACCAGCTCCCTCTTTTCCA--------------CTCAGCTTCCCCATCAGCAGAAGAGCTGCCCCCCGTGTCCTCCCACAGGGAACAAG---ACGGTCCAAGTCCATCCCCAGTTAAGGTCCGTGAACAGCAAACAGCT-GCAGGGAAATGTCCCAG-CGGGAAGCACAGGGGCGACTGGAGGCCGGTG-AAGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248672 168 - 81552678 CCTGATTCT----CAGTTTTGAGGCCCAGGCTGAAAGGAGCCTGGGGGAAATGAACCAGCTCCCTCTTTTCCA--------------CTCAGCTCCCCCATCAGCAGAAGAGCTG-CCCCCGTGTCCTCCCACAGGGAACCAG---ATGGGCTAAGTCCATCCCGAGTTAAGGTCCGCGAACA---------------------------------------------------------GTG-AAGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 165945 221 + 80997621 CCTGATTCT----CAGTTTTGAGGCCCAGGCTACAAGGAGCCTGGGGTAAATGAACCAGCTCCCTCTTTTCCC--------------CTCAAATCCCCCGTCAGCAGAA---CTGCCCCCCGGGGCCTCCCACAGGGAACGAG---ACAGGCTAAGTCCATCCCGAGTTAAGGTCCTCGAACGGCAAACGGCT-GCAGGGAAATGTCACAG-CCAGCATCAGAGGGACGACTGGAGGCCAGTG-AAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160080 223 + 74645514 CCTGATTCT----CAGTTTTGAGGCCCAGGCTACAAGGATCCTGGGGGAAATGAACCAGCTCCCTCTTTTCCC--------------CTCAAATCCCCCGTCAGCAGAA---CTGCCCCCCGCGTCCTCCCACAGGGAACGAG---ACGGGCTAAGTCCATCCCGAGTTAAGGTCCTCGAACGGCAAACGGCT-GCAGGGAAATGTCACAGCCCAGCATCAGAGGGACGACTGGAGGCCAGTGAAAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142475 220 + 75148670 CCTGATTCT----CAGTTTTGAGGCCCAGGCTACAAGGAGCCTGGGGGAAATGAACCGGCTCCCTCTTTTCCC--------------CTCAAAT-CCCCATCGGCAGAA---CTGCCCCCCGCGCCCTCCCACAGGGAACGAG---ACGGGCTGAGTCCATCCCGAGTTAAGGTCCTCGAACGGCAAACGGCT-GCAGGGAAATGTCACAG-CCAGCGTCCGAGGGACGACTGGAGGCCAGTG-AAGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 964907 224 - 1291538 CCGGATTCG----CAGTTTTGAGGCCCAGGCTAAAAGGAGCTGCAGGGAAATGAACCTGCTCCCCCTTTTCCC--------------CTTGGCTCCCCCATCAGCAGAGGAGCTGCCCGCCATGTCCTCCCACAGGGAACTAG---ATGGGCTCAGTCCATCGTGAGTTAAGGTCCATGAACAGCAAAGAGCT-GTAGGGAAATGTCACAG-CAGAAATTACAGGGGCAACTAGAGAGTGGTG-AGGA i calJac3.chrUn_GL286409 C 0 I 550 s mm10.chr11 75894896 232 + 122082543 CCTGACCTTGTC-TGATTCTGAGGTTGGAGGTACTGGGAGCCTGGAGGAAGAGAGCCAGTTCTCCCCTCCCCCACCCGACCCTTGCTCTCTGCT-CTCCATCAGCAGAG---CTG--TCCTGATGCCCCCAGGATGGAGAAGG---ACTGACTACCCACACCCTGAGCTGTGGTCAGTGAGCAACTGACAGCC-CTGGGGAAAACTCT----CCAGCAATAAAGAGGCGATGTGAGAGCAAGG-AAGA i mm10.chr11 I 144 C 0 s canFam3.chr9 15717279 227 - 61074082 CCTGGTTCTTTCTTGGTTTGGAAGCTGGGCCTACTGGGAGCCACAAGAGGA-GAGTCAGCTCCCCCCAGCCCC----------------CAGACTCCCC-TCAGCAGGAGAGGTGCCCTGTGC-TCCCCCCATGGGGAAATGGAGAACTGGCTAAATCCACCTCCAGTTAAGGTCAGTGAACAGCAAACAGCTGGGAGGGAAATGTTGTGA-AAGGAAAAACAGAGGCCGTTTGAGAGCAATG-AAGA i canFam3.chr9 C 0 C 0 e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=164202.000000 s hg38.chr17_GL383563v3_alt 269112 79 + 375691 ATCGCAGGCCTCCCGAAGTGTGCCAGCTTGCAGGGCACGGCCGACGAGGTGTGCGGCACGGGGCCGCGC-------CA--GACTGCAA s panTro4.chr17 245644 79 + 82630442 ATCGCAGGCCTCCCGAAGTGTGCCGGCTTGCAGGGCACGGCCGGCGAGGTGTGCGGCACGGGGCCGCGC-------CG--GACTGCAA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248840 79 - 81552678 ATCGCAGGCCTCCCGAAGGGTGCCAGCTTGCTGGGCATGGCCGGCGAGGTGTGCGGCACGGGGCCGCAC-------CG--GACTGCAA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 166166 79 + 80997621 ATCGCAGGCCTCCCGGAGTGTGGCAGCGCGCAGGGCACGGCCGGTGAGGTGTGCGGCACGGGGCAGCGC-------TG--GACCGCAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160303 79 + 74645514 ATCGCAGGCCTCCCGGAGTGTGGCAGCGCGCAGGGCACGGCCGGCGAGGTGTGCGGCACGGGGCAGCGC-------TG--GACCGCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142695 79 + 75148670 ATCGCAGGCTTCCCGGAGTGTGGCAGCGCGCAGGGCACGGCCGGCGAGGTGTGCAGCACGGGGCAGCGC-------TG--GACCGCAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 965681 77 - 1291538 ACCACAGGCCTCCACAAGTGCAGCAGCTCG-AGGGCACAG-CGCTGAGGTGTATGGCATGGGGCTTCGC-------TG--GACTGCAA i calJac3.chrUn_GL286409 I 550 C 0 s mm10.chr11 75895128 84 + 122082543 GTCGCAGGCCTGCTGAAGTGTGGCAGCTGGCAGGGCA--GCCGGAGAGGGGTACCACGTGGCGCTGAGCCACACCGTG--GACTGGAA i mm10.chr11 C 0 C 0 s canFam3.chr9 15717506 73 - 61074082 ATCGCAGGCCCTCCAAAGCGTGGCGGCTTGCAGGGCACAGCCGGAGAGGCG--------AGGGCCACAC-------CACCAACTGGAA i canFam3.chr9 C 0 C 0 e rheMac3.chr16 156879 3636 + 80904711 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=395702.000000 s hg38.chr17_GL383563v3_alt 269191 151 + 375691 ATGTCATTATCTGTTATTTACCACAACAGAGGACGAGAGGCTGCACAAAATTACCGCGCTTGGCAACG-GCCGCTGAGTGGATTTGCCAACGATGCTTCTTCCTGCTGCCAG----------AGGCTACACTGACCAGACCCAGGGAAGACAGCC---ACTGAGC s panTro4.chr17 245723 151 + 82630442 ATGTCATTATCTGTTATTTACCACAACAGAGGACGAGAGGCTGCACAAAATTACCGCGCTCGGCAACG-GCCGCTGAGTGGATTTGCCAACGATGCTTCTTCCTGCTGCCAG----------AGGCTACACTGACCAGACCCAGGGAAGACGGCC---ACTGAGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 248919 161 - 81552678 ATGTCATTATCTGTTATTTATCACAACAAAGGACGAGAGGCTGCTCAAAATTATGGCGCCTGGCAACG-GCCACTAAGTGGATTTGCCAACGATGCTTCTTCCTGCTGCCAGAGCTCTCCCAAGGCTACGGTGACCAGACTCAGGGAAGACAGCC---ACGGAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160515 149 + 80904711 ATGTCATTATCTGTTATTTACCACAACCGAGGACGAGAGGCTGCACAAAATCACGGCGCCTGGTAACG-GCCCCTAAGTGGATTTGCCAGCGATCCTTCTTCCCGCTGCCG-----------AAGCTACACTGACCAGACCTGGGGAAGACAGCG----CTGAGC i rheMac3.chr16 I 3636 C 0 s macFas5.chr16 166245 149 + 80997621 ATGTCATTATCTGTTATTTACCACAACAGAGGACGAGAGGCTGCACAAAATCACGGCGCCTGGTAACG-GCCCCTAAGTGGATTTGCCAGCAATCCTTCTTCCCGCTGCCG-----------AAGCTACACTGACCAGACCCGGGGAAGACAGCG----CTGAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160382 139 + 74645514 ATGTCATTATCTGTTATTTACCACAACAGAGGACGAGAGGCTGCACAAAATCACGGCGCCTGGTAACG-GCCCCTAAGTGGATTTGCCAGCGATCCTTCTTCCTGCTGCCG-----------AGGCTACACTGACCAGACCCGGGGAAGAC-------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142774 149 + 75148670 ATGTCATTATCTGTTATTTACCACAACAGAGGACGAGAGGCTGCACAAAATCACGGCGCCTGGTAACG-GCCCCTAAGTGGATTTGCCAGCGATCCTTCTTCCTGCTGCCA-----------AAGCTACACTGACCAGACCCGGGGAAGACAGCC----CCGAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 965758 156 - 1291538 ATGTCA----CTGTTATTTACCTCAACAGA-GACAAGAGGCTGTGTGAAATTACTGCTCCTGGTAATG-GCTGCTAAATGGATTTGCCAACGATGCTTCTTCCTGGGGCCGAGGCTCTCCCAAGGTTGCACTGACGGGCCCCAGGGAAGATGGAC---ACTAAGC i calJac3.chrUn_GL286409 C 0 I 1010 s mm10.chr11 75895212 157 + 122082543 ATGTCATTATCTGCTATTTACCACCGCAGAGGACAAGTGAGTCCACAGGATTACCTCTGCTAAGAGCGAGCCACTAAACAGATTGCCCAGCGGCA---CTTCCTGCTGCCGGAGCCTGGCA-CAGCTCTACCCACCAGACCAGGAGGAAGGAGCTGCAACT---- i mm10.chr11 C 0 C 0 s canFam3.chr9 15717579 158 - 61074082 ATGTCATTATCTGCTATTTACCACAACAGAGGACAAGAGGCTGCACAAAATTACTGTTCTTGGTAACA-GCCACTAAACCGATTTGCCAACA---CTGCTTCCTGCTGTCGACGTGCTCTCAAAGCTACGCTGACCAGACCTGAGGAAAAGAGCC---ACTGAGC i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 127548 1451 + 73212453 I a score=104031.000000 s hg38.chr17_GL383563v3_alt 269342 66 + 375691 CTAGGGGGCAGGTGTCCCGGGGGAGA-------AGGAGTCCCTGCAGGACAGCCCTGACCA------------GTGTCCCAGGTA s panTro4.chr17 245874 66 + 82630442 CTAGGGGGCAGGTGTCCCGGGGGAGA-------AGGAGTCCCTGCAGGACAGCCCTGACCA------------GTGTCCCAGGTA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249080 66 - 81552678 CTAGGTGGCAGGTGTCCTGGGGGAGA-------AGGAGTCCCTGCAGGACAGCCCTGACCA------------GTGTCCCAGGTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160664 64 + 80904711 CGGGGGGGCAGGTGCCT--GGGGAGG-------AGGAGTCACTGCAGGACAGCCCTGACCA------------GTGTCCCAGCTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166394 64 + 80997621 CCGGGGGGCAGGTGCCT--GGGGAGG-------AGGAGTCACTGCAGGACAGCCCTGACCA------------GTGTCCCAGCTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160521 54 + 74645514 ----------GGTGCCT--GGGGAGG-------AGGAGTCACTGCAGGACAGCCCTGACCA------------GTGTCCCAGCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142923 64 + 75148670 CCGGGTGGCAGGTGTCT--GGGGAGA-------AGGAGTCACTGCAGGACAGCCCTGACCA------------GTGTCCCAGGTA i chlSab2.chr16 C 0 C 0 s mm10.chr11 75895369 73 + 122082543 GCAGTAGCCAGGGACCTTAGGGGAAG-------GTGGG----TGGTGGGCACACATGGTTAAGGCAGGGAAGTGTGTCACTGTG- i mm10.chr11 C 0 I 1 s canFam3.chr9 15717737 73 - 61074082 TCAGGTGGCAAGGGGCTCAAGGGGGTGCTGGACAGGTGTCCTCAGGGAAGAGGCCTGACCA------------GGGTCCCCAATA i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=2100.000000 s hg38.chr17_GL383563v3_alt 269408 1 + 375691 C s panTro4.chr17 245940 1 + 82630442 C i panTro4.chr17 C 0 C 0 s rheMac3.chr16 160728 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166458 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160575 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 142987 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15717810 1 - 61074082 C i canFam3.chr9 C 0 C 0 e mm10.chr11 75895442 1 + 122082543 I e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e nomLeu3.chr19 249146 0 - 81552678 C e ponAbe2.chr17 127548 1451 + 73212453 I a score=13485.000000 s hg38.chr17_GL383563v3_alt 269409 7 + 375691 -CCCAGCC s panTro4.chr17 245941 7 + 82630442 -CCCAGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249146 7 - 81552678 -CCCAGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160729 7 + 80904711 -CCCGGCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166459 7 + 80997621 -CCCGGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160576 7 + 74645514 -CCTGACC i papAnu2.chr16 C 0 I 42 s chlSab2.chr16 142988 7 + 75148670 -CCCGGCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75895443 7 + 122082543 -CCCAGCC i mm10.chr11 I 1 I 4 s canFam3.chr9 15717811 4 - 61074082 CCCC---- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=35575.000000 s hg38.chr17_GL383563v3_alt 269416 18 + 375691 TAGGCCCGCAGAATCTCT s panTro4.chr17 245948 18 + 82630442 TAGGCCCGCAGAAGCTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249153 18 - 81552678 TAGAACTGCAGAAGCTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160736 18 + 80904711 AAGGCCTGCAGAAGCTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166466 18 + 80997621 AAGGCCTGCAGAAGCTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160625 18 + 74645514 TAGGCCTGCAGAAGCTCT i papAnu2.chr16 I 42 C 0 s chlSab2.chr16 142995 18 + 75148670 TAGGCCTACAGAAGCTCT i chlSab2.chr16 C 0 I 15 s mm10.chr11 75895454 16 + 122082543 CAAGTCCACGGAGCCT-- i mm10.chr11 I 4 C 0 s canFam3.chr9 15717815 18 - 61074082 CAAGCCTGCAGAAGCGTT i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=6437.000000 s hg38.chr17_GL383563v3_alt 269434 6 + 375691 CACCCG s panTro4.chr17 245966 6 + 82630442 CACCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249171 6 - 81552678 TACCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160754 6 + 80904711 TACCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166484 6 + 80997621 TACCTG i macFas5.chr16 C 0 T 36 s papAnu2.chr16 160643 6 + 74645514 TACCGG i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15717833 6 - 61074082 TGCCTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75895470 0 + 122082543 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=10361.000000 s hg38.chr17_GL383563v3_alt 269440 17 + 375691 CTCTAGCAGGGGCTGGC s panTro4.chr17 245972 17 + 82630442 CTCTAGCAGGGGCTGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249177 17 - 81552678 CTCTAGCAGGGGCTGGC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 160649 17 + 74645514 CTCCAGCAGGGGCTGGC i papAnu2.chr16 C 0 C 0 s mm10.chr11 75895470 8 + 122082543 ---------GGGCAGGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15717839 17 - 61074082 CTCAGTGAGGATCTGTC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=-1964.000000 s hg38.chr17_GL383563v3_alt 269457 1 + 375691 C------- s panTro4.chr17 245989 1 + 82630442 C------- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249194 1 - 81552678 C------- i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 160666 1 + 74645514 C------- i papAnu2.chr16 C 0 T 47 s mm10.chr11 75895478 8 + 122082543 TTGCTTCC i mm10.chr11 C 0 C 0 e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=3522.000000 s hg38.chr17_GL383563v3_alt 269458 5 + 375691 CAGCC s panTro4.chr17 245990 5 + 82630442 CAGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249195 5 - 81552678 CAGCC i nomLeu3.chr19 C 0 I 47 s papAnu2.chr16 160620 5 + 74645514 CGGCC i papAnu2.chr16 T 47 C 0 s mm10.chr11 75895486 5 + 122082543 CACCC i mm10.chr11 C 0 C 0 e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=18369.000000 s hg38.chr17_GL383563v3_alt 269463 34 + 375691 TAGGCCTGCAGAATCTCTCACCCACTCTAGCAGG s panTro4.chr17 245995 34 + 82630442 TAGGCCTGCAGAATCTCTCACCCACTCTAGCAGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249247 34 - 81552678 TAGAACTGCAGAAGCTCTTACCCACTCTCGCAGG i nomLeu3.chr19 I 47 C 0 s papAnu2.chr16 160625 34 + 74645514 TAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGG i papAnu2.chr16 C 0 C 0 s mm10.chr11 75895491 34 + 122082543 TTGGGAGATAGGAGCTCTTAGTCACTCAATTAGG i mm10.chr11 C 0 I 10 e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=4746.000000 s hg38.chr17_GL383563v3_alt 269497 8 + 375691 GGCTGGCC s panTro4.chr17 246029 8 + 82630442 GGCTGGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249281 8 - 81552678 GGCTGGCC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 160659 8 + 74645514 GGCTGGCC i papAnu2.chr16 C 0 T 54 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=573.000000 s hg38.chr17_GL383563v3_alt 269505 2 + 375691 CA s panTro4.chr17 246037 2 + 82630442 CA i panTro4.chr17 C 0 I 3 s nomLeu3.chr19 249289 2 - 81552678 CA i nomLeu3.chr19 C 0 T 91 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=8596.000000 s hg38.chr17_GL383563v3_alt 269507 40 + 375691 TAGGCCTGCAGAATCTCTCACCCGCTCTAGCAGGGGCTGG s panTro4.chr17 246042 40 + 82630442 TAGACCTGCAGAAGCTCTCACCCACTCTAGCAGGGGCTAC i panTro4.chr17 I 3 C 0 s nomLeu3.chr19 249200 40 - 81552678 AAGGCCTACAGAAGCTCTTACCCGCTCTCGCAGGGGCTGG i nomLeu3.chr19 T 91 T 94 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=9919.000000 s hg38.chr17_GL383563v3_alt 269547 42 + 375691 CCCAGCCTAGGCCTGCAGAATCTCTCACCCACTCTAGAAGGG s panTro4.chr17 246082 42 + 82630442 CCCAGCCTACACCTGCAGAATCTCTCACCCACTCTAGCAGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249146 42 - 81552678 CCCAGCCTAGAACTGCAGAAGCTCTTACCCACTCTAGCAGGG i nomLeu3.chr19 T 94 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=1878.000000 s hg38.chr17_GL383563v3_alt 269589 5 + 375691 GCTGG s panTro4.chr17 246124 5 + 82630442 GCTGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249188 5 - 81552678 GCTGG i nomLeu3.chr19 C 0 T 47 s papAnu2.chr16 160613 5 + 74645514 GCTAC i papAnu2.chr16 T 54 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=19732.000000 s hg38.chr17_GL383563v3_alt 269594 42 + 375691 CCCAGCCTAGGCCTGCAGAATCTCTCACCCACTCTAGCAGGG s panTro4.chr17 246129 42 + 82630442 CCCAGCCTAGGCCTGCAGAAGGTCTCACCCACTCTAGCAGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249146 42 - 81552678 CCCAGCCTAGAACTGCAGAAGCTCTTACCCACTCTAGCAGGG i nomLeu3.chr19 T 47 C 0 s papAnu2.chr16 160618 42 + 74645514 CCCGGCCTAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGGG i papAnu2.chr16 C 0 T 47 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166490 36 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=43101.000000 s hg38.chr17_GL383563v3_alt 269636 54 + 375691 GCTGGCCCAGCCTAGGCCTGCAGAATCTCTTACCCGCTCTAGCAGGGGCTGGCC s panTro4.chr17 246171 54 + 82630442 GCTGGCCCAGCCTAGGCCTGCAGAAGCTCTCACCCACTCTAGCAGGGGCTGGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249188 54 - 81552678 GCTGGCCCAGCCAAGGCCTACAGAAGCTCTTACCCGCTCTCGCAGGGGCTGGCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 166454 54 + 80997621 GCTACCCCGGCCAAGGCCTGCAGAAGCTCTTACCTGCTCCAGCAGGGGCTGGCC i macFas5.chr16 T 36 T 54 s papAnu2.chr16 160613 54 + 74645514 GCTACCCCGGCCTAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGGGGCTGGCC i papAnu2.chr16 T 47 T 54 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e ponAbe2.chr17 127548 1451 + 73212453 I a score=1473.000000 s hg38.chr17_GL383563v3_alt 269690 5 + 375691 CAGCC s panTro4.chr17 246225 5 + 82630442 CAGCC i panTro4.chr17 C 0 T 188 s nomLeu3.chr19 249242 5 - 81552678 CAGCC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=5785.000000 s hg38.chr17_GL383563v3_alt 269695 24 + 375691 TAGACCTGCAGAATCTCTCACCCA s panTro4.chr17 246042 24 + 82630442 TAGACCTGCAGAAGCTCTCACCCA i panTro4.chr17 T 188 C 0 s nomLeu3.chr19 249247 24 - 81552678 TAGAACTGCAGAAGCTCTTACCCA i nomLeu3.chr19 C 0 I 47 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=12134.000000 s hg38.chr17_GL383563v3_alt 269719 58 + 375691 CTCTAGAAGGGGCTGGCCCAGCCTAGACCTGCAGAATCTCTCACCCACTCTAGAAGGG s panTro4.chr17 246066 58 + 82630442 CTCTAGCAGGGGCTACCCCAGCCTACACCTGCAGAATCTCTCACCCACTCTAGCAGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249318 58 - 81552678 CTCTAGCAGCGGCTGCCCCAGCCTAGAACTGCAGAAGCTCTTACCCGCTCTCGCAGCG i nomLeu3.chr19 I 47 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=41930.000000 s hg38.chr17_GL383563v3_alt 269777 54 + 375691 GCTGGCCCAGCCTAGGCCTGCAGAATCTCTTACCCGCTCTAGCAGGGGCTGGCC s panTro4.chr17 246124 54 + 82630442 GCTGGCCCAGCCTAGGCCTGCAGAAGGTCTCACCCACTCTAGCAGGGGCTGGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249376 54 - 81552678 GCTGGCCCAGCCAAGGCCTACAGAAGCTCTTACCCACTCTCGCAGGGGCTGGCC i nomLeu3.chr19 C 0 T 188 s macFas5.chr16 166454 54 + 80997621 GCTACCCCGGCCAAGGCCTGCAGAAGCTCTTACCTGCTCCAGCAGGGGCTGGCC i macFas5.chr16 T 54 T 54 s papAnu2.chr16 160613 54 + 74645514 GCTACCCCGGCCTAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGGGGCTGGCC i papAnu2.chr16 T 54 T 54 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e ponAbe2.chr17 127548 1451 + 73212453 I a score=1473.000000 s hg38.chr17_GL383563v3_alt 269831 5 + 375691 CAGCC s panTro4.chr17 246178 5 + 82630442 CAGCC i panTro4.chr17 C 0 I 94 s nomLeu3.chr19 249242 5 - 81552678 CAGCC i nomLeu3.chr19 T 188 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=875.000000 s hg38.chr17_GL383563v3_alt 269836 4 + 375691 TAGA s panTro4.chr17 246277 4 + 82630442 TAGG i panTro4.chr17 I 94 C 0 s nomLeu3.chr19 249247 4 - 81552678 TAGA i nomLeu3.chr19 C 0 I 47 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=8626.000000 s hg38.chr17_GL383563v3_alt 269840 40 + 375691 CCTGCAGAATCTCTCACCCGGTCTAGCAGGGGCTGGCCCA s panTro4.chr17 246281 40 + 82630442 CCTGCAGAAGGTCTCACCCACTCTAGCAGGGGCTGGCCCA i panTro4.chr17 C 0 T 138 s nomLeu3.chr19 249298 40 - 81552678 CCTACAGAAGCTCTTACCCACTCTAGCAGCGGCTGCCCCA i nomLeu3.chr19 I 47 T 87 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=382.000000 s hg38.chr17_GL383563v3_alt 269880 4 + 375691 TAGG s panTro4.chr17 246183 4 + 82630442 TAGG i panTro4.chr17 T 138 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e nomLeu3.chr19 249338 87 - 81552678 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=18343.000000 s hg38.chr17_GL383563v3_alt 269884 78 + 375691 CCTGCAGAATCTCTCACCCGCTCTAGCAGGGGCTGGCCCAGCCTAGACCTGCAGAATCTCTCACCCACTCTAGAAGGG s panTro4.chr17 246187 78 + 82630442 CCTGCAGAAGCTCTCACCCACTCTAGCAGGGGCTGGCCCAGCCTAGGCCTACAGAAGCTCTCACCCACTCTAGCAGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249251 78 - 81552678 ACTGCAGAAGCTCTTACCCACTCTCGCAGGGGCTGGCCCAGCCAAGGCCTACAGAAGCTCTTACCCACTCTAGCAGCG i nomLeu3.chr19 T 87 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=40367.000000 s hg38.chr17_GL383563v3_alt 269962 54 + 375691 GCTGGCCCAGCCTAGACCTGCAGAATCTCTCACCCGCTCTAGCAGGGGCTGGCC s panTro4.chr17 246265 54 + 82630442 GCTGGCCCAGCCTAGGCCTGCAGAAGGTCTCACCCACTCTAGCAGGGGCTGGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249329 54 - 81552678 GCTGCCCCAGCCTAGAACTGCAGAAGCTCTTACCCGCTCTCGCAGCGGCTGGCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 166454 54 + 80997621 GCTACCCCGGCCAAGGCCTGCAGAAGCTCTTACCTGCTCCAGCAGGGGCTGGCC i macFas5.chr16 T 54 T 54 s papAnu2.chr16 160613 54 + 74645514 GCTACCCCGGCCTAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGGGGCTGGCC i papAnu2.chr16 T 54 T 47 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e ponAbe2.chr17 127548 1451 + 73212453 I a score=20855.000000 s hg38.chr17_GL383563v3_alt 270016 47 + 375691 CAGCCTAGACCTGCAGAATCTCTCACCCACTCTAGCAGGGGCTGGCC s panTro4.chr17 246319 47 + 82630442 CAGCCTAGACCTGCAGAAGGTCTCACCCACTCTAGCAGGGGCTGCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249383 47 - 81552678 CAGCCAAGGCCTACAGAAGCTCTTACCCACTCTCGCAGGGGCTGGCC i nomLeu3.chr19 C 0 T 159 s papAnu2.chr16 160620 47 + 74645514 CGGCCTAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGGGGCTGGCC i papAnu2.chr16 T 47 T 54 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=191.000000 s hg38.chr17_GL383563v3_alt 270063 2 + 375691 CA s panTro4.chr17 246366 2 + 82630442 CA i panTro4.chr17 C 0 T 138 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e nomLeu3.chr19 249430 159 - 81552678 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=1843.000000 s hg38.chr17_GL383563v3_alt 270065 24 + 375691 TAGGCCTGCAGAATCTCTCACCCG s panTro4.chr17 246230 24 + 82630442 TAGGCCTACAGAAGCTCTCACCCA i panTro4.chr17 T 138 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e nomLeu3.chr19 249430 159 - 81552678 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=2782.000000 s hg38.chr17_GL383563v3_alt 270089 11 + 375691 CTCTAGCAGGG s panTro4.chr17 246254 11 + 82630442 CTCTAGCAGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249271 11 - 81552678 CTCTCGCAGGG i nomLeu3.chr19 T 159 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e papAnu2.chr16 160667 54 + 74645514 T e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 54 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=40715.000000 s hg38.chr17_GL383563v3_alt 270100 54 + 375691 GCTGGCCCAGCCTAGGCCTGCAGAATCTCTCACCCGCTCTAGCAGGGGCTGGCC s panTro4.chr17 246265 54 + 82630442 GCTGGCCCAGCCTAGGCCTGCAGAAGGTCTCACCCACTCTAGCAGGGGCTGGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249282 54 - 81552678 GCTGGCCCAGCCAAGGCCTACAGAAGCTCTTACCCACTCTAGCAGCGGCTGCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 166454 54 + 80997621 GCTACCCCGGCCAAGGCCTGCAGAAGCTCTTACCTGCTCCAGCAGGGGCTGGCC i macFas5.chr16 T 54 T 18 s papAnu2.chr16 160613 54 + 74645514 GCTACCCCGGCCTAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGGGGCTGGCC i papAnu2.chr16 T 54 T 47 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e ponAbe2.chr17 127548 1451 + 73212453 I a score=17744.000000 s hg38.chr17_GL383563v3_alt 270154 40 + 375691 CAGCCTAGACCTGCAGAAGCTCTCACCCACTCTAGCAGGG s panTro4.chr17 246319 40 + 82630442 CAGCCTAGACCTGCAGAAGGTCTCACCCACTCTAGCAGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249336 40 - 81552678 CAGCCTAGAACTGCAGAAGCTCTTACCCGCTCTCGCAGCG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 160620 40 + 74645514 CGGCCTAGGCCTGCAGAAGCTCTTACCGGCTCCAGCAGGG i papAnu2.chr16 T 47 T 47 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 18 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=14336.000000 s hg38.chr17_GL383563v3_alt 270194 36 + 375691 GCTGCCACAGCCTAGGCCTGCAGAATTTCTCACCCA s panTro4.chr17 246359 36 + 82630442 GCTGCCCCAGCTTAGACCTGCAGAATCTCTTACCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249376 36 - 81552678 GCTGGCCCAGCCAAGGCCTACAGAAGCTCTTACCCA i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 160613 36 + 74645514 GCTACCCCGGCCTAGGCCTGCAGAAGCTCTTACCGG i papAnu2.chr16 T 47 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e rheMac3.chr16 160760 0 + 80904711 C e macFas5.chr16 166508 18 + 80997621 T e ponAbe2.chr17 127548 1451 + 73212453 I a score=18229.000000 s hg38.chr17_GL383563v3_alt 270230 14 + 375691 CTCTAGCAGGGGCT s panTro4.chr17 246395 14 + 82630442 CTCTAGCAGGGGCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249412 14 - 81552678 CTCTCGCAGGGGCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160760 14 + 80904711 CTCCAGCAGGGGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166490 14 + 80997621 CTCCAGCAGGGGCT i macFas5.chr16 T 18 C 0 s papAnu2.chr16 160649 14 + 74645514 CTCCAGCAGGGGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e chlSab2.chr16 143013 15 + 75148670 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=6300.000000 s hg38.chr17_GL383563v3_alt 270244 3 + 375691 GGC s panTro4.chr17 246409 3 + 82630442 GGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249426 3 - 81552678 GGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160774 3 + 80904711 GGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166504 3 + 80997621 GGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160663 3 + 74645514 GGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 143028 3 + 75148670 GGC i chlSab2.chr16 I 15 C 0 e mm10.chr11 75895525 10 + 122082543 I e canFam3.chr9 15717856 0 - 61074082 C e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=10696.000000 s hg38.chr17_GL383563v3_alt 270247 4 + 375691 CTCA s panTro4.chr17 246412 4 + 82630442 CTCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249429 4 - 81552678 CTCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160777 4 + 80904711 CTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166507 4 + 80997621 CTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160666 4 + 74645514 CTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 143031 4 + 75148670 CTCA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15717856 4 - 61074082 CTCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75895525 10 + 122082543 I e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=229345.000000 s hg38.chr17_GL383563v3_alt 270251 117 + 375691 CAGTGAGGCTGGGCCGTGA---------------CCCCTCCACGTATCCAACTATTGTCTAGCCAATGCAAAGGTGGGACAGACCAGGGCAAGGCCTCAGGCCCACTCTGT-AGGGGCGCTGCCTCAGGGGGG s panTro4.chr17 246416 118 + 82630442 CAGTGAGGCTGGGCCGTGA---------------CTCCTCCACGTATCCAACTATTGTCCAGCCAATTCAAGGGTGGGACAGACCAGGGCAAGGCCTCAGGCCCACTCTGTGGGGGGCGCTGCCTCAGGGGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249433 118 - 81552678 CAGTGAGGCTGGGCCATGA---------------CTCCCCCCCGTATCCAACTATTGTCCAGCCAATTCAAGGGTGGGACAGACCAGGGCAAGGCCTCAGGCCCACTCTGTAGGGGGCACTGCCTCAGGGGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160781 112 + 80904711 CAGCGAGGCTGGGCCGTCA---------------CTCCTCCACGTATCCAACCATTGTCCAGCCAATTCAAGGGTGGGACAGACCAGGGCAAGGTCTCAGGCCCACTCTGTAGGGGGCCCTGCCTCA------ i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166511 118 + 80997621 CAGCGAGGCTGGGCCGTCA---------------CTCCTCCACGTATCCAACCATTGTCCAGCCAATTCAAGGGTGGGACAGACCAGGGCAAGGTCTCAGGCCCACTCTGTAGGGGGCCCTGCCTCAGGGGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 160670 117 + 74645514 CAGTGAGGCAGGGCCGTCA---------------CTCCTCCACGTATCCAACCATTGTCCAGCCAATTCAAGGGTGGGACAGACCAGGGCAAGGTTTCAGGCCCACTCTGTAGGGGGCCCTGCCTCG-GGGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 143035 118 + 75148670 CAGTGAGGCTGGGCCGTCA---------------CTCCTCCACGTACCCAACCATTGTCCAGCCAATTCAAGGGTGGGACAGACCAGGGCAAGGTCTCAGGTCCACTCTGCAGGGGGCCCTGCCTCAGGGGGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75895535 100 + 122082543 CAGGGAGACTCAAACCAGA---------------CCCCTACAAACTCCCCATGTCCGTCCAGACGTCTCCAGATCATGACAAACCAGG--------------CCAGACTGT---GACAACTGCCTCAGGGAG- i mm10.chr11 I 10 C 0 s canFam3.chr9 15717860 129 - 61074082 CAGTGACTCTGGTCCCTAACAACTCCCTGCAGATCTCCCCCGCACGTCTTGCCAC---CCAGATACCTCAGGGGTGTGATGAACTAGGCTAAGGCCCCAGGATCACTCTGTGATGAGT-CTGCTTCGAGGGGG i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 965914 1010 - 1291538 I e ponAbe2.chr17 127548 1451 + 73212453 I a score=142511.000000 s hg38.chr17_GL383563v3_alt 270368 84 + 375691 ----CCCAGGGCTGGGTGCTACCTCTCACTCTG-GATGCTCCG-------------------CCATAGGGGCTGCAATCCCTTCCCCAGCATCGTGGGCACGTAGCCG s panTro4.chr17 246534 84 + 82630442 ----CCCAGGGCTGGGTGCTACCTCTCACTCTG-GATGATCCG-------------------CCATAGGGGCTGCAATCCCTTCCCCAGCATCGTGGGCACGTAGCCG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249551 84 - 81552678 ----CCCAGGGCTGGGTGCTCCCTCTCACTCTG-GATGCTCCG-------------------CCATAGGGGCTGCAATCCCTTCCCCAGCATCGGGGGTGCGTAGCCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 160893 77 + 80904711 -----------CTGGCTGCTACCTCTCACCCCA-GATGCTCGG-------------------CCACAGGGGCTGCGATCCCTTCCCCAGCATTGGGGGTACGTAGCCG i rheMac3.chr16 C 0 I 68 s macFas5.chr16 166629 84 + 80997621 ----CCCAGGGCTGGGTGCTACCTCTCACCCCA-GACGCTCGG-------------------CCACAGGGGCTGCGATCCCTTCCCCGGCATTGGGGGTACGTAGCCG i macFas5.chr16 C 0 I 68 s papAnu2.chr16 160787 84 + 74645514 ----CCCAGGGCTGGGTGCTACCTCTCACCCCA-GACGCTCGG-------------------CCACAGGGGCTGCGATCCCTTCCCCGGCACTGGGGGTACTTAGCCG i papAnu2.chr16 C 0 I 221 s chlSab2.chr16 143153 82 + 75148670 ----CCCAGGGCTGGGTGCTACCTCTCACCCCA-GACGCTCCG-------------------CCACAGGGGCTGCGATCCCTTCCCCGGCACT--GGGCACGCAGCCG i chlSab2.chr16 C 0 I 17 s calJac3.chrUn_GL286409 966924 103 - 1291538 ----CCTAGAGCTGGATGCTCCCTCTGACTCTG-GATGCTCCTAGGCTGGATGCTCCCTCACCCTCTGGAGCTAAAATTCCTCCCCCAGTGTCAGGGGCATGAAGCCA i calJac3.chrUn_GL286409 I 1010 C 0 s mm10.chr11 75895635 67 + 122082543 -----CCAATGCTAGCGGCCGCTCCCGATTCTG---TAACCTG-------------------CCATGGGCGTGGAGTTGCTT---CTGGCATTGGGG----------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15717989 74 - 61074082 CAGTGTTAGGATTGAGGGCTGCAGC--ATTCTGTGATACTCGG-------------------CTCTAGGGGTTATG------CAGTCAACACCTTTGGTAC------- i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 127548 1451 + 73212453 I a score=77286.000000 s hg38.chr17_GL383563v3_alt 270452 66 + 375691 TCGGC-----------------CACCTCATTTCATCGGCCACCTTATTCGAAAG-TGGGACGAGACATCACCTTC---CTTTGGG------------------------GT s panTro4.chr17 246618 65 + 82630442 TCGGC-----------------CACCTCATTTCATCGGCCACCTTATT-GAAAG-TGGGACTAGACATCACCTTC---CTTTGGG------------------------GT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249635 53 - 81552678 -------------------------------TCATCGGCCACCTCATTTGCAAG-TGGGACTAGGCATCACCTTC--GCTTGGGA------------------------GT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 161038 67 + 80904711 CCGGC-----------------CACCTCATTCCACCGGCCACCTCATTCAGAAG-TGGGGCCAGACATCACCTTG---CTTTGGG-----------------------CGT i rheMac3.chr16 I 68 C 0 s macFas5.chr16 166781 67 + 80997621 CCGGC-----------------CACCTCATTCCACCGGCCACCTCATTCAGAAG-TGGGGCCAGACATCACCTTG---CTTTGGG-----------------------CGT i macFas5.chr16 I 68 C 0 s papAnu2.chr16 161092 67 + 74645514 TCGGC-----------------CACCTCGTTCCACCGGCCACCTCATTCAGAAG-TGGGGCCAGACATCACCTTG---CTTTGGG-----------------------CGT i papAnu2.chr16 I 221 C 0 s chlSab2.chr16 143252 84 + 75148670 TCGGCCACCTCATTCCATCGGCCACCTCATTCCACCGGCCGCCTCATTCTGAAG-TGGGGCCAGACATCACCTTG---CTTTGGG-----------------------AGT i chlSab2.chr16 I 17 C 0 s calJac3.chrUn_GL286409 967027 58 - 1291538 TCAGC-----------------------------CTTGCCACCTTGTTTGCAAG-TGTGACCAGATATCACCTTCTTTCTTTGGG-----------------------AGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75895702 48 + 122082543 ---------------------------------------CACCCCATCTATAAG-GTGACATCTGGGTCTCCTCC---TTTTAGGGGA--------------------GGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15718063 66 - 61074082 ------------------------------------------CCCATGGGCAAGCTGGCACTAGAGACCATCTTC---CTTTGGTGGGGGGGCGGCGGTGGCGGTGGTGGT i canFam3.chr9 C 0 I 231 e ponAbe2.chr17 127548 1451 + 73212453 I a score=121567.000000 s hg38.chr17_GL383563v3_alt 270518 40 + 375691 CTCCTGCTCATCTTTAGATCTCTTTACATCTTAAAAGGTA s panTro4.chr17 246683 40 + 82630442 CTCCTGCTCATCTTTAGATCTAATTACATCTTAAAAGGTA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249688 40 - 81552678 CTCCTGCTCGTCTTTAGATCTCTTTACATCTTCAAAGGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 161105 40 + 80904711 CTCCTGTGCATCTTTAGATCTCTTTACATCTTAAAAGGTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166848 40 + 80997621 CTCCTGTGCATCTTTAGATCTCTTTACATCTTAAATGGTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 161159 40 + 74645514 CTCCTGTGCATCTTTAGATCTCTTTACATCTTAAAAGGTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 143336 40 + 75148670 CTCCTGTGCATCTTTAGATCTCTTTACATCTTAAAAGGTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 967085 40 - 1291538 CTCCTGCACATCTTTAGATCTCTTTACATTTTAAAAGGTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75895750 40 + 122082543 CTCCTGAATATTTTCAGCTCTCTTCCTTTATCATAAGGTA i mm10.chr11 C 0 C 0 s canFam3.chr9 15718360 40 - 61074082 cTCCTGTATGTCTTTAGCTCTCTCTACTTCCCACAGGGTA i canFam3.chr9 I 231 C 0 e ponAbe2.chr17 127548 1451 + 73212453 I a score=16265.000000 s hg38.chr17_GL383563v3_alt 270558 9 + 375691 CATAGGCAA s panTro4.chr17 246723 9 + 82630442 CATAGGCAA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 249728 8 - 81552678 TGTAGGCA- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 161145 9 + 80904711 CATAGACAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 166888 9 + 80997621 CATAGACAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 161199 9 + 74645514 CATAGACAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 143376 9 + 75148670 CATAGACAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 967125 9 - 1291538 TACAGGCAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75895790 9 + 122082543 TGGAGATAA i mm10.chr11 C 0 I 427 e canFam3.chr9 15718400 0 - 61074082 C e ponAbe2.chr17 127548 1451 + 73212453 I a score=21330.000000 s hg38.chr17_GL383563v3_alt 270567 16 + 375691 AGTTCTCTGGG--Ctttt s panTro4.chr17 246732 16 + 82630442 AGTTCTCTGGG--CTTTT i panTro4.chr17 C 0 M 4334 s rheMac3.chr16 161154 18 + 80904711 AGttctttgcgttttttt i rheMac3.chr16 C 0 I 1 s macFas5.chr16 166897 16 + 80997621 AGttctttgcg--ttttt i macFas5.chr16 C 0 I 1 s papAnu2.chr16 161208 18 + 74645514 AGTTctctgcgttttttt i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 143385 16 + 75148670 AGCTCTCTGCG--ttttt i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 967134 16 - 1291538 AGTTCTCTGGG--ttttt i calJac3.chrUn_GL286409 C 0 I 4 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e nomLeu3.chr19 249736 0 - 81552678 C e ponAbe2.chr17 127548 1451 + 73212453 I a score=256899.000000 s hg38.chr17_GL383563v3_alt 270583 172 + 375691 ttttcttgagacagggtctcacgctgtcacccaggctagagtgcagtggcgggagc-acggctcactgtagctttaacctcccaggcttaagcaatcctccccacctcagcctccccagtagttgagattatgggt---------------------gcgcaccaccgtgcctggctaatttttgtat-------tttttt s nomLeu3.chr19 249736 161 - 81552678 ----------acagggtctcatgctgtcaaccaggctagagtgcagtggtgggacc-acggctcactgtagctttaacctcccaggcccaagcaatcct-cccacctcagcctccccagtagttgagattatgggt---------------------gtgcaccaccatgtctggctaatttttgtat-------tttttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 161173 178 + 80904711 ttttcttgagacggggtctcacgctgtcacccaggctagagtgcagtggtgggaca-acagctcattgtagccttaacctcccaggctcaagcaatcct-cccacctcagtctccccactagttaagattatgggt---------------------gcacactaccatttctggctaatttttgtatatatatatttttt i rheMac3.chr16 I 1 I 5 s macFas5.chr16 166914 178 + 80997621 ttttcttgagacggggtctcacgctgtcacccaggctagagtgcagtggtgggacc-acagctcattgtagccttaacctcccaggctcaagcaatcct-cccacctcagtctccccactagttaagattatgggt---------------------gcacactaccatttctggctaatttttgtatatatatatttttt i macFas5.chr16 I 1 I 5 s papAnu2.chr16 161227 178 + 74645514 ttttcttgagacagggtctcacgctgtcacccaggctagagtgcaatagtgggacc-acagctcattgtagccttaacctcccaggctcaagcaatcct-cccacctcagtctccccactaGTTAAGATTATGGGT---------------------GCACACTaccatttctggctaatttttgtatatatatttttttt i papAnu2.chr16 I 1 I 5 s chlSab2.chr16 143402 161 + 75148670 ttttcttgagacagg----------gtcacccaggctagagtgcagtggtgggacc-acggctcattgtagccttaacctcccaggctcaagcaatcct-cccacctcagtctccccactagttaagattatggat---------------------gcacaccaccatttctagctaattttcgtat-------tttttT i chlSab2.chr16 I 1 I 7734 s calJac3.chrUn_GL286409 967154 192 - 1291538 ttctcttgagataaggtctcactctgtcacccaggctggactgcagtgaccagaccaacggctcattgtagccttaacctccctggctcaagcaatcct-cccatgtcagcctacccagtagttgagactataggtatgtgccaccatgcctggctaatgcgccaccatgcctggctaatttttgtat-------tttgt- i calJac3.chrUn_GL286409 I 4 C 0 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e ponAbe2.chr17 127548 1451 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=2865.000000 s hg38.chr17_GL383563v3_alt 270755 2 + 375691 gt s nomLeu3.chr19 249897 2 - 81552678 gt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 161356 2 + 80904711 gt i rheMac3.chr16 I 5 C 0 s macFas5.chr16 167097 2 + 80997621 gt i macFas5.chr16 I 5 C 0 s papAnu2.chr16 161410 2 + 74645514 gt i papAnu2.chr16 I 5 C 0 s calJac3.chrUn_GL286409 967346 2 - 1291538 gt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e chlSab2.chr16 143563 7734 + 75148670 I e ponAbe2.chr17 127548 1451 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=189040.000000 s hg38.chr17_GL383563v3_alt 270757 135 + 375691 agagagggggttttgccttgttgcccgggctggtctcaaactcctgggctcaagggatcctcctgcctttgcctcccaagtagctgggactgcaggGgcaccaccaggcccacctaatttttttcattttttatt--- s nomLeu3.chr19 249899 135 - 81552678 agagatggggttttgccatgttgcccaggctggtctcgaactcctgggctcaagtgatcctcctgccttggcctcccacgtagctgggactacaggggcaccaccaggcccagcTAACTtttttcattttttgtt--- i nomLeu3.chr19 C 0 I 310 s rheMac3.chr16 161358 131 + 80904711 agagatggggttttgccatgttgcccaggctggtcttgaactcctcgactcaagtgat-ctcctgcctcagcctcccaagtagctgcgactacagggacaccaccatgcccagcTAGtttttttcatttgtt------ i rheMac3.chr16 C 0 C 0 s macFas5.chr16 167099 131 + 80997621 agagatggggttttgccatgttgcccaggctggtcttgaactcctcgactcaagtgat-ctcctgcctcagcctcccaagtagctgcgactacagggacaccaccatgcccagcTAGtttttttcatttgtt------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 161412 131 + 74645514 agagatggggttttgccatgttgcccaggctggtcttgaactcctcgactcaagtgat-ctcctgcctcagcctcccaagtagctgcaactacaggggcaccaccatgcccagctagtttttttcatttgtt------ i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 151297 130 + 75148670 agaaagggggttttggcatgttgcccaggctggtcttgaactcctcggctcaagtgat-ctcctgcctcagcctcctaagtagctgcgactacaggggcaccaccatgcccggctaattttttcc-tttgtt------ i chlSab2.chr16 I 7734 C 0 s calJac3.chrUn_GL286409 967348 113 - 1291538 agagatggggttttgccat-ttgcccaggctgatcttgaactcctggactcaagtgatcctcctgcctcagcctcccaagtagctgggacta---------------------cTTGAttttctcatttttt---gtt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e ponAbe2.chr17 127548 1451 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=127966.000000 s hg38.chr17_GL383563v3_alt 270892 81 + 375691 aaaacagggtctcgctttattgcctgggctgg---tctcaaactcctggcttccagtgatcctcctacctcggcctcccaaagt s nomLeu3.chr19 250344 81 - 81552678 aaaacagggtctcgctttgttgcccaggctgg---tctcaaactcctggcttccagtgatcctcctacctcagccccccacagt i nomLeu3.chr19 I 310 C 0 s rheMac3.chr16 161489 84 + 80904711 aaaacagggtctcgctttgttgcccaggctggtcgtctcaaaatcctggcttccagtgatcctcccaccttggcctcccaaagt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 167230 78 + 80997621 aaaacagggtctcgctttgttgcccaggctggtcgtctcaaactcctggcttccagtgatcctcccaccttggcctcc------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 161543 78 + 74645514 aaaacagggtctcgctttgttgcccaggctggtcgtctcaaactcctggcttccagtgatcctcctaccttggcctcc------ i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 151427 84 + 75148670 aaaacagggtcttgctttgttgcccaggctggtcatctcaaactccgggcttccagtgatcctcctacctcggcctcccaaagt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 967461 80 - 1291538 aaaacacggtcttgctttgttgctcaggctg----tatcaaactcctggcatccagggatcctcctacctcggcctcccaaagt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e ponAbe2.chr17 127548 1451 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=12816.000000 s hg38.chr17_GL383563v3_alt 270973 52 + 375691 cctggaattacaggtgtgacccaccgcgcccggccTGTAGGCAAAGTCCTGA s nomLeu3.chr19 250425 30 - 81552678 gctggaattacaggtgtgagccaccgcgcc---------------------- i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 151511 52 + 75148670 gtaggaattacaggcgtgacccactgcacctggccTGTAGGCAACGTTCTGA i chlSab2.chr16 C 0 I 6 s calJac3.chrUn_GL286409 967541 47 - 1291538 gctggaattacaggtgtgagccacctcacccagccTGTGGGCAAAGT----- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e papAnu2.chr16 161621 0 + 74645514 C e rheMac3.chr16 161573 0 + 80904711 C e macFas5.chr16 167308 0 + 80997621 C e ponAbe2.chr17 127548 1451 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=-500.000000 s hg38.chr17_GL383563v3_alt 271025 21 + 375691 GCCGAGCTGTGACCACGCCTG s nomLeu3.chr19 250455 1 - 81552678 --------------------g i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e calJac3.chrUn_GL286409 967588 0 - 1291538 C e chlSab2.chr16 151563 6 + 75148670 I e papAnu2.chr16 161621 0 + 74645514 C e rheMac3.chr16 161573 0 + 80904711 C e macFas5.chr16 167308 0 + 80997621 C e ponAbe2.chr17 127548 1451 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=900.000000 s hg38.chr17_GL383563v3_alt 271046 3 + 375691 GCC s ponAbe2.chr17 128999 3 + 73212453 gcc i ponAbe2.chr17 I 1451 C 0 s nomLeu3.chr19 250456 3 - 81552678 gcc i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e canFam3.chr9 15718400 0 - 61074082 C e calJac3.chrUn_GL286409 967588 0 - 1291538 C e chlSab2.chr16 151563 6 + 75148670 I e papAnu2.chr16 161621 0 + 74645514 C e rheMac3.chr16 161573 0 + 80904711 C e macFas5.chr16 167308 0 + 80997621 C e panTro4.chr17 246748 4334 + 82630442 M a score=4972.000000 s hg38.chr17_GL383563v3_alt 271049 23 + 375691 TGTAGGCAAAGTTCTGACCCGAG s ponAbe2.chr17 129002 23 + 73212453 TGTAGGCAAAGTCATGAGCCGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 250459 23 - 81552678 TGTAGGCAAAGTCCTGAGCCGAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 167308 6 + 80997621 ------caaagt----------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 161621 6 + 74645514 ------caaagt----------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 967588 11 - 1291538 TCTGAATAGAG------------ i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15718400 23 - 61074082 TGTGGGCAAAGTTTTGAACCAAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e chlSab2.chr16 151563 6 + 75148670 I e rheMac3.chr16 161573 0 + 80904711 C e panTro4.chr17 246748 4334 + 82630442 M a score=1316.000000 s hg38.chr17_GL383563v3_alt 271072 2 + 375691 CC s ponAbe2.chr17 129025 2 + 73212453 CT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 250482 2 - 81552678 CT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 151569 2 + 75148670 CT i chlSab2.chr16 I 6 C 0 s calJac3.chrUn_GL286409 967599 2 - 1291538 CT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15718423 2 - 61074082 CA i canFam3.chr9 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e papAnu2.chr16 161627 0 + 74645514 C e rheMac3.chr16 161573 0 + 80904711 C e macFas5.chr16 167314 0 + 80997621 C e panTro4.chr17 246748 4334 + 82630442 M a score=674502.000000 s hg38.chr17_GL383563v3_alt 271074 298 + 375691 GTAGGAGTCATTGCAAGGCactggctgtgtcatc--gagagggagt-----catccctctgagcgtcagtgtctccatctggaaaacgagtatgaacactgccttgccttttgcctgcccatctcct---gggggccatga-gggacacatgacatcatggaaatgTC--AGGCACAGCGGCTCTCAGAAGCAC-------CCCC-ACCCTGACTTCCTCCCGCTCAGAGGGCACAGACTCACT-ACGGCCTGAGCCAAAGCGAACTGGGCGGCAAACCTGCCACAGCTTTAAAATAACCA-CAATCGAGCTGTGTCCCAG s ponAbe2.chr17 129027 299 + 73212453 GTAGGAGTAATTGCAAGGCactggctgtgtcacc--gagagggagt-----catccctctgagcgtcagtgtctccatctggaaaatgagtaaaaacactaccttgccttttgcctgcccatctcct---gggggccatga-gggacacatgacatCGTAGAAATGTC--AGGCACAGCGACTCTCAGAAGCAC-------CCCCCACCCTGACTTCCTCCCGCTCAGAGGGCACAGACTCACT-ACGGCCTGAGCCAAAGCGAACTGGGCGGCAAACCTGCTACGGCTTTAAAATAACCA-CAATCGAGCTGTGTCCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 250484 301 - 81552678 GTAGGAGTAATTGCAAGGCactggctgtgtcaccgagagagagagt-----catccctctgagcgtcagtgtctccatctggaagatgagtacaaacactgccttgccttttgcctgcccatctcct---gggggccatga-gggacacatgacatCACAGAAATGTC--AGGCACAGCGGCTCTCGGAAGCAC-------CCCCCACCCTGACTTCCTCCCGCTCAGAGGGCACAGACTCACT-ACCGCCTGAGCCAAAGCGAACTGGGCGGCAAACCTGCCACAGCCGTAAAATAACCA-CCAATGAGCTGTGTCCCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 161573 289 + 80904711 gtaggagtaATTGCAAGGCactggctgtgtcacc--gagagggagt-----catccctctgaa-gtcagtgtctccatctggaaaatgagtataaacac-----tgccttttgcctgcccatctcct---gggggccacga-gggacacacgacatcatagacatgTC--AGGCACAGGGGCTCTC---GGTGC-------CCCCTACCCTGACCTCCTCCCGCTCAGAGGG--CAGACTCACT-ATGGCCTGAGCCAAAGCGAACTGGGCAGCAAATCTGCCACGGCTTTAAAATAACCACCCGTCGAGCTGTGTCCCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 167314 292 + 80997621 gtaggagtaATTGCAAGGCactggctgtgtcacc--gagagggagt-----catccctctgaa-gtcagtgtctccatctggaaaatgagtataaacac-----tgccttttgcctgcccatctcct---gggggccacga-gggacacacgacatcatagacatgTC--AGGCACAGGGGTTCTCGGAGGTAC-------CCCCTACCCTGACCTCCTCCCGCTCAGAGGG--CAGACTCACT-ACGGCCTGAGCCAAAGCGAACTGGGCAGCAAACCTGCCACGGCTTTAAAATAACCACCCGTCGAGCTGTGTCCCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 161627 293 + 74645514 gtaggagTAACTGCAAGGCACTGGCTGTGTCACC--GAGAGGGAGT-----CACCCCTCCGAG-GTCAGTGTCTCCATCTGGAAAATGAGTATAAACAC-----TGCCTTTTGCCTGCCCATCTCCT---GGGGGCCACGAGGGGACACACGACATCATAGACATGTC--AGGCACAGGGGTTCTCAGAGGTGC-------CCCCTACCCTCACCTCCTCCTGCTCAGAGGG--CAGACTCACT-ACGGCCTGAGCCAAAGTGAACCGGGCAGCAAACCTGCCACGGCTTTAAAATAACTACCCGTCAAGCTGTGTCCCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 151571 297 + 75148670 GTAGGAGTAATCGCAAGGCactggctgtgtcacc--gagagggggtcatcccatccctccaag-gtcagtgtctccatctggaaaacgagtataaacac-----tgcctcttgcctgcccatctcct---gggggccacga-gggacacacgacatcatagacgtgTC--AGGCACAGGGGTTTTCAGAGGTAC-------CCCCTTCCCTCACCTCCTCCCGCTCAGAGGG--CAGACTCACT-ACAGCCTGAGCCAAAGCGAACTGGGCAGCAAACCTGCCACGGCTTTAAAATAACCACCCATCCAGCTGTGTCCCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 967601 287 - 1291538 GTAAGAGTCGTtgcaatgcactggcagtgccacc--gagagggagt-----cattcctctgagcctcagtttctctatctggaaaatgagtatgaacac-----tgccttttccctgcccatctcct---gggggacatga-gtgacacatgacatCACAGGAACGTCAGAGGCACGGGGGTTCTCAGAAGCAC-------CCCC-ACACTGAC-TCCTCCTGCGCAGA--------ACTCACT-AGGGCCCGGGCCAAAGTGAACTGAGCAGCAAACCTGCCATGGCTTTAAAACCACCACCAACCAAGCTGTGCTCCAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15718425 268 - 61074082 GTGAGAGTAGT----------------Tctcact--tagc-----t-----tatc----------------tctccatctagaaaatgggtataatcat-----tgccttttgcctaccctacctctgaggggggatgtga-gggccacatgGCATCAGAGAAACATCGGAGGCAGAGCAGCTCCCAGAAGCACATGCCAACCCCCACACTGGCTTCCTCCTACTGAGAGGACACAGATGCAATCACAGCCTGAGCCAAAGCAGACTAGGAAATAAACTGATGATGGCTTTAAAAAAACAA---GCCCAACTGTGTTCTGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75895799 427 + 122082543 I e panTro4.chr17 246748 4334 + 82630442 M a score=1607280.000000 s hg38.chr17_GL383563v3_alt 271372 750 + 375691 AGGCACAGAGG------CGAGA-----GCTTCGGCTCCCAGCCCAGCTGCTGCC---------------ACTGCGGCATCTGCGGA------------CTGCGAGGCTGCAA---GGCCTGGACTGAGCCCGA-----------------GCTGCCTGGGAGGAAACCGC--AGGCA-ggcccgagagagtctctcgtccagcct---ttgcctgtcac-----------------tggaaggcca-------------gagagggaaacaga-----------ttttcatctgaggtca--------cgcaggaggttctgagcacagctgTCTC-----CCGACTCTCGCAGGT------------GTAGCAGGCCAGGCAGGTCCACGGAG----------------------------------------------TCAC---CCCGC---------CCCAC----CCACTACGTCCGTCCTTCGATTTACACAAGGTCCAAGGAGCCGTTGCAGGGAATGAACTTGAGCCACGCCTTCAGCTGGATTTCAGACGTGGGCAGGT-GTGTCTGTGTG--CGGTGGGGGGAGGAGA-----GAGGAAGCCATCGGAGCCACACTGCAGAGAGGGCCGTGTCCCCAGGAGAGATTCGGACCCCAGGACGAGGCTAAGCTCAACGGGAAACAGGATGGGAGGCGCCCGCCGTCGAGGGAGGGTGGATCCAGGCCCGGCCCTCCC--------------GGCTGCCACCCACACTCACCCCAGGCCTG--CCCAGCA---GGTGTGTGAGCCGCCTGGAAAA-GGGGAGCTACAGGGAAGGGTGAAAAAGCCCC--GAATACAACACAGCTCCTAAAACTGGAATTCGATT------TACATGTATAGTCAT---GGGACGATGTTTTTGATATCTTATTAAGTGGAAAAAGAAGATGAAAAAAG--------------------------------------GAGTGTACATAGGCATC s ponAbe2.chr17 129326 832 + 73212453 AGGCGCAGAGG------CAAGA-----GCTTCGGCTCCCAGCCCAGCTGCTGCC---------------ACTGCGGCATCTACAGA------------CAGCGAGGCTGCAA---GGCCTGGACTGAGCCCAA-----------------GCTGCCTGGGAGGAAACCGC--AGGCA-ggcccgagagattctctcgtccagcct---ttgcctgtcac-----------------tggaaggcca-------------gagaggggaacaga-----------ttttcatctgaggtca--------cgcaggaggttctgagcacagctgTCTC-----CCGACTCTTGCAGGTCTGGG------TGTAGCAGGCCAGGCAGGTACACGGAGGCTCAGATGTG-----TTTTACCTGTGAATTTAGGCAGCACGG-CCTCAC---CCTCC---------CCGAC----CCACTACGTCTGTCCTTCGATTTACACAACGTCCAAGGAGCGGTGGAAGGGAATGAACGTGAGCCACGCCTTCAGCTGGATTTCAGACGTGGGCAGGT-GTGTCCGTGTG--CGGTGGGGGGAGTACA-----GAGGAAGCCATCGGAGCCGCACTGCAGAGAGGGCCGTGGCCCCAGGAGAGATTCGGACCCCAGGACGAGGCTAAGCTCAGCGGGAAACAGGATGGGAGGCGCCCGCCGTCGAGGGAGGGTGGGTCCAGGCCCGGCCCTCCC--------------GGCTGCCGCCCACACTCACCCCAGGCCTG--CCCAGCA---GGTGTGCGAGCTGCCTGGAAAA-GGGGAGCTATAGGGAAGGGTGAAAAAGCCCC--GAATACAACACAGCTCCTAAAATTGGAATTCGATT------TATATTTATAGTCAT---GGGACAATGTTTTTGATATATTA--AAGTGGAAAAAGAAGATGAAAAAAGGGAATTCCAGAATAAGCAATGTATTTTGGTCCCATGAAGAGTGTACATACGCACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 250785 831 - 81552678 AGGCACAGAGG------CAAGA-----GCTTCGGCTCCCAGCCCAGCTGCTGCC---------------ACTGTGGCATCTACAGA------------CAGCGAGGCTACAA---GGCCTGGACTCAGCCCAA-----------------GCTGCCTGGGAGGAAACCAC--A-GCA-GGCCAGagagagtctctcgtccagcct---ttgcctatcac-----------------tggaaggcca-------------gagaggagaacaga-----------ttttcatctgaggtca--------cgcaggaggttctgagcacagctgTCTC-----CCGACTCTCGCAGGTCTGGG------TGTAGCAGGCCAGGCAGGTACACAGAGGCTCAGATGTG-----TTTTACCTGTGAA-TTAGGCAGCGCGG-GCTCAC---CCCGC---------CCCAC----CCACTACGTCTGTCCTTCGATTTACAAAAGGTCCAAGGAGCCGTTGCAGGGAATGAACTTGAGCCACGCCTTCAGCTGGATTTCAGACGTGGGCAGTT-GTGTCTGTGTG--CGGTGTGGGGAGTAGA-----GAGGAAGCCATCAGAGCGGCACTGCCGAGAGGGCCGTGGCCCCAGGAGAGATTCGGACCCCAGGACGAGGCTAAGCTCAACGGGAAACAGGATGGGAGGCGCCCGCCATCGAGAGAGGGTGGATCCAGGCCCGGCCCTCCC--------------GGCTGCCACC--CACTCACCCCAGGCCTG--CCCAGCA---GGTGTGTGAGCCGCCTGGAAAAGGGGGGGCTGCAGAGAAGGGTGAAAAAGCCCC--GAATACAACACAGCTCCTAAAACCGGAATTCGATT------TATATGTACAGTCAT---GGGACAATGTTTTTCATATCTTATTAAGTGGAAAAAGAAGATTAAAAAAGGGAATTCCAGAATAAGCAATGTATTTTGGTCCCATGAAGAGTGTACATATGCATC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 161862 825 + 80904711 CGGCAT-GAGG------CACGA-----GCTTCGCCTCCCAGCCCAGCGGCTGCC---------------ACTGTGGCATCTGAGGA------------CAGCAAGGCTGCAA---GGCCCGGACCGAGCCCCA-----------------GCCGCCTGGGAGGAAACCGC--AGGCA-ggcccaggagattctctcatccagcct---tcgcctgtcac-----------------tggaaggcca-------------gagaagggaaccga-----------ttttca--tgaggtca--------cgcaggaggttCTGAGCATCGCCGTCCT-----CCGACTCCCGCAGGTCTGGG------TGTAGCAGGCCAGGCACGTACACGAAGGCTCAGACGTG-----TTTTACCTGTGAATTTAGGCAGCACGG-CCCCAC--------------------------CCCCCACGTCTGTCCTTCGATTCACACAAGGTCCAAGGAGCCGTTGCAGGGAATGAACTTGAGCCTCGCCTTCAGCTGGATTT-GGACGTGGGCAGGT-GTGTCTGTGTG--CGGTGTGGGGAGTAGACAGCGGAGGAAGCCATGGGAGCCGCCCTGCAGAGAGGGCCACGGCCCCAGGAGAGATTCGGACCCCAGGAAGAGGCTAAACTCAGCGGGAAACAGGATGGGAGGCGTCTGCCGTCGAGGGAGGGTGGGTCCAGGCCCGGCCCTCCC--------------AGCTGCCCCCCACGCTCACCCCAGGCCTG--CCCTGCA---GGTGTGTGAGCTGCCTGGAAAA-GGGGGGCTAGTGGGAAGTGTGAAAAGGCCCC--GCGTACGACACAGCTCCTAAAACGGAAGTGTGATT------TATATGCATAGTCAT---GGGACGATGTTATTGGTATCTTATTAAGTAGGAAAAGAAGATGAACAAAGGGAATTCCAGAATAAGCAACATATTTCGGTCCCATGGAGAGTGTATATACGCGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 167606 825 + 80997621 CGGCAT-GAGG------CACGA-----GCTTCGCCTCCCAGCCCAGCGGCTGCC---------------GCTGTGGCATCTGAGGA------------CAGCGAGGCTGCGA---GGCCCGGACCGAGCCCCA-----------------GCCGCCTGGGAGGAAACCGC--AGGCA-ggcccaggagattctctcatccagcct---tcgcctgtcac-----------------tggaaggcca-------------gagaagggaaccga-----------ttttca--tgaggtca--------cgcaggaggttCTGAGCATCGCCGTCCT-----CCGACTCCCGCAGGTCCGGG------TGTAGCAGGCCAGGCACGTACACGGAGGCTCAGACGTG-----TTTTACCTGTGAATTTAGGCAGCACAG-CCCCAC--------------------------CCCCCACGTCTGTCCTTCGATTCACACAAGGTCCAAGGAGCCGTTGCAGGGAATGAACTTGAGCCTCGCCTTCAGCTGGATTT-GGACGTGGGCAGGT-GTGTCTGTGTG--CGGTGTGGGGAGTAGACAGCGGAGGAAGCCATGGGAGCCGCCCTGCAGAGAGGGCCATGGCCCCAGGAGAGATTCGGACCCCAGGAAGAGGCTAAACTCAGCATGAAACAGGATGGGAGGCGTCTGCCGTCGAGGGAGGGTGGGTCCAGGCCCGGCCCTCCC--------------AGCTGCCCCCCACGCTCACCCCAGGCCTG--CCCTGCA---GGTGTGTGAGCCGCCTGGAAAA-GGGGGGCTAGTGGGAAGTGTGAAAAGGCCCC--GCGTACGACACAGCTCCTAAAACGGAAGTGTGATT------TATATGCATAGTCAT---GGGACGATGTTATTGGTATCTTATTAAGTACGAAAAGAAGATGAACAAAGGGAATTCCAGAATAAGCAACATATTTCGGTCCCATGGAGAGTGTATATACGCATC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 161920 841 + 74645514 AGGCAT-GAGG------CACGA-----GCTTCGCCTCCCAGCCCAGCGGCTGCC---------------GCTGTGGCATCTGCGGA------------CAGCGAGGCTGCGA---GGCCCGGACCGAGCCCCA-----------------GCCGCCTGGGAGGAAACCGC--AGGCA-GGCCCAGGAGATTCTCTCGTCCAGCCT---TCGCCTGTCAC-----------------TGGAAGGCCA-------------GAGAAGGGAACAGA-----------TTTTCA--TGAGGTCA--------CGCAGGAGGTTCTGAGCATCGCCGTCTT-----CCGACTCCCGCAGGTCTGGG------TATAGCAGACCAGGCACGTACACGGAGGCTCAGATGTG-----TTTTACCTGTGAATTTAGGCAGCACGG-ccccacgccaccgc---------cccaccccacccccatgtcTGTCCTTCGATTCACACAAGGTCCAAGGAGCCGTTGGAGGGAATGAACTTGAGCCTCGCCTTCAGCTGGATTTCAGACGTGGGCAGGT-GTGTCTGTGCG--CGGTGTGGGGAGTAGACAGCGGAGGAAGCCATGGGAGCCGCCCTGCAGAGAGGGCCAGGGCCCCAGGAGAGATTCGGACCCCAGGAAGAGGCTAAACTCAGCGGGAAACAGGATGGGAGGCGTCTGCTGTCGAGGGAGGGTGGGTCCAGGCCCGGCCCTCCC--------------AGCTG-CCCCTACACTCaccccaggcctg--ccctgca---ggTGTGTGAGCCGCCTGGAAAA-GGGGGGCTAGAGGGAAGTGTGAAAAGGCCCC--ACTTACGACACAGCTCCTAAAACGGAAGTGTGATT------TATATGTATAGTCAT---GGGACGATGGTTTTGATATCTGATTAAGtaggaaaagaagatgaa-aaagggAATTCCAGAATAAGCAACAGATTTCGGTCCCAAGGAGAGTGTATATACGCGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 151868 828 + 75148670 CAGCAT-GAGG------CACGG-----GCTTCGGCTCCCAGCCCAGCTGCTGCC---------------GCTGTGGCATCTGCGGA------------GAGTGAGGCTGCGA---GGCCCGGACCGAGCCCCA-----------------GACGCCTGGGAGGAAACCGC--AGGCA-ggcccaggagattctcttgtccagcct---tcgcctgtcac-----------------tggaaggcca-------------gagaggggaaccga-----------ttttcatctgaggtca--------cacaggaggttCTGAGCATCGCCGTCTT-----CTGACTCCCGCAGGTCTGGG------TGTAGCAGGCCAGGCACGAACACGGAGGCTCACATGTG-----TTTTACCTGTGAATTTAGGCAGCACGG-CCCCAT--------------------------CCCCCACGTCTGTCCTTCGATTCACACAAGGTCCAAGGAGCCGTTGCAGGGAATGAACTTGAGCCTCGCCTTCAGCTGGATTTGAGACGTGAGCGGGT-GTGTCTGTGCG--CGGTGTGGGGAGTAGACGGCGGAGGAAGCCATGGGAGCCGCCCTGCAGAGAAGGCTGTGGCCCCAGGAGAGATTCGGACCCCAGGAAGAGGCTAAACTCAACGGGAAACAGGATGGGAGGCGTCTGCCGTCGAGGGAGGGTGGGTCAAGGCTTGGCCCTCCC--------------GGCTGCCCCCCACACTCACCCCAGGCCTG--CCCTGCA---GGTGTGTGAGCCGCCTGGAAAA-GGGGGGCTACAGGGAAGCGTGAAAAGGCCCC--GCGGACAACACAGCTCCTAAAACTGAAGTGTGATT------TATATGTATAGTCAT---GGGACGATGTTTTTGATATCTGATTAAGTAGGAAAAGAAGATGAAAAGAGGGAATTCCAGAATAAGCAATATATTTTGGTCCCATGGAGAGTGTATATACGCGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 967888 835 - 1291538 AGA----GAGA------CGGGA-----GCTTCAGCACCCAGCCCTGTAATTGCT---------------GCTCTGGCACCTGTGCA------------CAGTGAGGCTTCAC---GGCTGGGACAGAGCTGCACTGTGTGGGAGGAAACCGATAAATGGGAGGAAACCGC--AGGGA-GGCC-GAGAGATTCTCCCTTCCAGCCT---TTGCCTTTCAC-----------------TGGAAGGTCA-------------GAGAGAGGAACAGA-----------TTTTCACCTGAGGTCA--------TGCGGGAGGTTCAGAGCACGGCTGTCTC-----CCAGCCCTTCCAGGTGTGGG------TGCAGCAGGACAGGCAGGTA-ACTGAGGTTCAGATGGG-----TTCTGCCTGTGCATTTACACCGCAGTG-CCTCAC---CCCACCTGCCCCAGCCCAC----CCACCACATCTGTCCTTTCATTTACCCAAGATCCCAGGAGCCGTTGCAGGG-ATGAACTTGAACCATGCCTTCAACGAGAGTTCGGACGTGTGTGGGT-GTGTCTATGTG--CAGTGCAGGGAGTGGAGGGCAGAGGAAGGCA-------------GCAGACAGGGCCAGG--CGCAGGAGAGACTCGGACCCCAGAAAGAGGCTGAGCTTAAC-CGAAACAGGAT-GGAGGCATCTGCTGTC-AGTGAGGGTGGGTTCAGGCATGGCTCTCCCCTCTCCCCTGCCCTGGCTGCCATCCACACTCA-CCCAGGCCTG--ACCAACA---GGGATGT--------------A-AGGGGGCTGGAGGGGAGTGTGAAAACTCCCC---TATACAGCACCGCTCCTACAACTGGAATTAGATT------TACACGTATAGTCAT---GGGAGGATGTTTTTGGTATCTTATTAAGTGGGAA---AAGATGAAAAAAGGAAATTCCAGAATAAGTAATGTAGTTTGGTCCCATGAAGAGCATACATACACCTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75896226 753 + 122082543 AGGCACAGAGGTTACAACAGGGAGGCTGCTTCAGCTCC--------TTGCTGTA---------------CCTGCCTCAC--ACTGA------------CCCCCAGTCTGTGAATGGAAACTGGGTGTGCCTAA-----------------GC-ACACAAGATGAAACCGCTTGGAAG-AGCCTATGATACTGTCTAGTTCAACCC---TTTCCTCTCACATGGGCCTCGAGGGGAGTGGGGGATAAA-GTGTGTGTGTGGAGGAGGGAGGAGGAGGGGTGATTTTTTTCATTCAAGGTCACATCCATCCATCGGAGGGACAGGGCTGTGTGGCC-----------CTATTGTAG---TGGG------TATAGGAGGGCAGATAAGGA--------------------------------TGGCCTTAGACAACAGGATTCCCAC-----------------CCAAC----CC---------------------ACAGAAAGACCAAGGAACCTT--CTGGAAATAAGCTTGAACTGT---CACACCTAGATTTCAGACACGGGTAGGC-ATGGTTGTGGGGTCAGTGTGCAGAGGCAA-------------------------GTTGCAGG--------------------------GGATCTCAGAAGGAAGACAGACTAA----GGAACGGGATGGGAGATGTCTGCTGTCTAAGGGGG---------------------TA--------------GGCATCCATTCAC-CTCACTCCAGCTGTGGCCCCTGCA---GGC-TGTGAGTAACCTGGGA-A-GAAGGCCTGCAGGGAAGTGTGGAAATCCCCTTATATTATCACATAGTTCCTAAAAACAGAATTGGATTGTTTTGCGTGCGTGTGGGTGT---GGGATGTTGATTCTGATGTGATATGAAGTG-----AAAACATAAACAAAAGAAACTACAGAATAAGAAATATATTTAGGT-TCATCAAGAAAATACACAGACATT i mm10.chr11 I 427 I 256 s canFam3.chr9 15718693 806 - 61074082 AGGCTC-AAAA------AATGA-----GGTTTAGCTCTCAGCT--GTTGCTCCCTGATCTGCAAGGCGGGCACTGGCCCCTGGGGAGCAGGTCTGGGGCAGGAATGATGCTG---G---CTGACGCAGCCTAA-----------------GCGTCACAGGAGGAAGGTGC--TGGAAGGGCCCGAGAGACATGCTCACCTGGACCCTACTACCTTCTACAGG--------------GGGAGGACCAAGGCCTGGGAGTGGGGGATGGTAGGGA-----------TTCTGACTCAGAATCA--------CCTGGGGCCATCAGAACAGAGTTGCATCTGCAGCCGGCTCTCCTGATTATGGGTCCCCTTGCCACAGGT---GTGGGTAC-CACTGACACAGATGTGGCATCTGTCACCTACAGGGCCAGGCACCACTGCTCCCAC-----------------CACAC----CCACTGGCTGTGTCC---------------ACCATGGGATTCCCTTCTGAGAAAGAACCTGACCCATGCCC-CAACTGGATTTCAGGCATGGGGGGCTGGGGTTTGTGTG--TGG----GAAAGGCCTATGCAGAGGAAAGCAGCAGAGCTGAGCTGCAGGGTGGGCTGTGGCCCTGGGAGAG-----------GAGAAGAGTCCACACCTAATGG------GGATGGGGGACA-------------GAGGATGG----------------CCC--------------AGCATCC---------CACCTGTGTCCTG--ACCTCCAAAGGGTATGCAAGCAGCCTGAAG-A-GAAGGGCCTCAGGGAAGTGTGAAAGATCCCC---TTCATCATAGAGCTCCCACAGAAGGAAGTAGATT------C-CATGTACAGACCTGAAGGGGAGGGATCTTTGATGT--TAATAAGTGGGGG--------GGAAAAAGGAAACTACAGTATAAAGAGTATATTATGGCCCCATTTA-AGTGCATGTGGGTGGC i canFam3.chr9 C 0 C 0 e panTro4.chr17 246748 4334 + 82630442 M a score=43275.000000 s hg38.chr17_GL383563v3_alt 272122 34 + 375691 ------CACCCTGCGAACATTTGTGTGAGTGCGAAGAGAC s ponAbe2.chr17 130158 34 + 73212453 ------CACCCTGCGAACATTTGTATGAGTGTGAGGAGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 251616 34 - 81552678 ------CACCCTGCAAACATTTGTGTGCGTGTGAGGAGAC i nomLeu3.chr19 C 0 I 2 s rheMac3.chr16 162687 30 + 80904711 ------CACCCTGCAAGGATT--TGTGAGTGTG--GAGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 168431 30 + 80997621 ------CACCCTGCGAGGATT--TGTGAGTGTG--GAGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 162761 32 + 74645514 ------CATCCTGCGAACATTCATGTGAGGGTG--GAGac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 152696 30 + 75148670 ------CGCCCTGCGAGGATT--TGTGAGTGTG--GAGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 968723 34 - 1291538 ------GACCCTGTGTACACCCATGTGAGTGTGGGGAGAC i calJac3.chrUn_GL286409 C 0 I 2 s canFam3.chr9 15719499 36 - 61074082 TATTGGGTCACTGTGTCCACTTGTATGCATGCA--CAG-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75896979 256 + 122082543 I e panTro4.chr17 246748 4334 + 82630442 M a score=126287.000000 s hg38.chr17_GL383563v3_alt 272156 51 + 375691 AGAGAAGGTGGGAGAAGGACAAACACCCAGACCCCGAAGGTCAGGGGCGGG- s ponAbe2.chr17 130192 51 + 73212453 AGAGAAGGCGGGAGAAGGACAAACACCCAGACCCCTAAGGTCAGGGGTGGG- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 251652 51 - 81552678 AGAGAAGGCGGGAGAAGGGCAAACACCCAGGCCGCTAAGTTCAGGGGTGGG- i nomLeu3.chr19 I 2 C 0 s rheMac3.chr16 162717 51 + 80904711 AGGGAGGGTGGGAGAAGGACAAACACACAGACCGCCACGGCCAGGGGCGGG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 168461 51 + 80997621 AGGGAGGGTGGGAGAAGGACAAACACACAGACCGCCACGGCCAGGGGCGGG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 162793 51 + 74645514 agggagggtgggagaaggacaAACACACAGACCGCCACGGCCAGGGGCGGG- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 152726 51 + 75148670 AGGGAGGGAGGGAGAAGCACAAACACCCAGACCGCTACGGCCAGGGGCGGG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 968759 48 - 1291538 AGAGAAGGTGGG---AGGACACACACCCCGACTGCTAAGATCACGGGTAAG- i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75897235 51 + 122082543 AGAGAAGAGTTTAGAAGGAAAAACACCCAAACTCTTAGGGTTAGGGCTGGG- i mm10.chr11 I 256 I 1012 s canFam3.chr9 15719535 52 - 61074082 AGAGAAGGGTGCAGAAGGACAAACGCTCAGGCTGTGAAGGATGGGTGTGTGG i canFam3.chr9 C 0 C 0 e panTro4.chr17 246748 4334 + 82630442 M a score=72707.000000 s hg38.chr17_GL383563v3_alt 272207 37 + 375691 AGCTTCGCATTTCACACACA--CCTCTGGTGTTTGACTT s ponAbe2.chr17 130243 37 + 73212453 AGCTTAACATTTCACACACA--CCTGTGTTGTTTGACTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 251703 39 - 81552678 AGCTTAACATTCCACACACACCCCTGTGGTGTTTGACTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 162768 37 + 80904711 AGCGTCCTATTTCACACACA--CCTGCGGTGTTTGACTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 168512 37 + 80997621 AGCGTCCTATTTCACACACA--CCTGCGGTGTTTGACTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 162844 37 + 74645514 AGCGTCCTATTTCACACACA--CCTGCGGTGTTTGACTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 152777 37 + 75148670 AGCCTCCTATTTCACACACA--CCTGCGGTGTTTGATTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 968807 37 - 1291538 AGCTTAACATTTCACATACA--TCTGCAGCGTTTCACGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15719587 31 - 61074082 --AGTTGAATTTTATATACT--CT----GTATTTGACTT i canFam3.chr9 C 0 I 939 e mm10.chr11 75897286 1012 + 122082543 I e panTro4.chr17 246748 4334 + 82630442 M a score=12928.000000 s hg38.chr17_GL383563v3_alt 272244 7 + 375691 ATTTTTT- s ponAbe2.chr17 130280 7 + 73212453 ATTTTTT- i ponAbe2.chr17 C 0 M 431 s nomLeu3.chr19 251742 7 - 81552678 ATTTTTT- i nomLeu3.chr19 C 0 I 1 s rheMac3.chr16 162805 7 + 80904711 ATTTTCT- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 168549 7 + 80997621 ATTTTCT- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 162881 7 + 74645514 ATTTTCT- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 152814 7 + 75148670 ATTTTCT- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 968844 8 - 1291538 ATTTTTTT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e panTro4.chr17 246748 4334 + 82630442 M a score=589684.000000 s hg38.chr17_GL383563v3_alt 272251 411 + 375691 AGGGTTGGAATATCCTTGATATGTCATGTCTATGAGGCATCCAAGTCAGACAATAAACTTGGCAGTTCTCTATAAGGTTCGAG---GTGGAGATAAAGTCTGAGGTTTACAAAGTTAAGAACTAACAACGTAACTGTATCGTTAAGGTTggcggctcatgcctgcatcccagcagtttcagaggctgagcaggtggatcgcctgaggag-tctgagg-cagcctgggcaacataacaaggcccagtctccac-------aaaaaatgagaaattagccaggagtggtggcgcacacctgtagtcccagctgcccgggaggctgaggtgggaggatcactggagcccagaggggtgaggctgccgtgagctaagatcacac--cgctgcactccagccggggcagcacagcgagaccctgtctcaa- s nomLeu3.chr19 251750 407 - 81552678 AGGGTTGGATTATCCTCGATATGTAATGTCTACGACGCATCCCAGTCAGAAAATAAACTCGGCAGTTCTCTATAGGACTCTGG---GTGGAGATAAAACCTGAGGCTTATAAAGTTAAG----AACAACTTAACTTTATCATTAA-GTTggcagctcatgcctgtaccccagaagctggggaggctgagcaggagggtcg-ctgagggg-tttgagg-cagcctgggcaacataacaagacccagtctccacaa-----aaaaaaaaagaaatcagccaggagtggtggcgcacacccgtagtcccagcggctcgggaggctgaggtgggaggatcactcgagcccagaaggttgaggctgccgtgagctaggatcacac--cactgcactccagcctgggcagcagagcgagaccctgtctcaa- i nomLeu3.chr19 I 1 C 0 s rheMac3.chr16 162812 390 + 80904711 AGGGTTGGATTGTCCTTAATATGTAATGTCTACGAGGCATCCCAATCAGAAAACAACCTTGGCAGTTCTCCACAGGATTCCGG---GTGGAGATAAAATCTGAGGCTTT--------------AACGAC------TTATCGTTAATGTTggcggctcacgcctgtatcccggtactttgggaggctgcgcaggaggatcgcctgaggag-tttgaggccagcctgtccaacgtaacaagccccagtctctac-------aaaaaataagaacttagccaggagtggtggcg--cgccggtcgtcccagccgctcgggaggttgaggtgggaggatcgcccgagcccagaaggtcgaggctgccatgagctaggatcgcac--cacggcactccagcctgggcagcagagcgagaccctgtctgaa- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 168556 390 + 80997621 AGGGTTGGATTGTCCTTAATATGTAATGTCTACGAGGCATCCCAATCAGAAAACAACCTTGGCAGTTCTCCACAGGATTCCGG---GTGGAGATAAAATCTGAGGCTTT--------------AACGAC------TTATCGTTAACGTTggcggctcacgcctgtatcccggtactttgggaggctgcgcaggaggatcgcctgaggag-tttgaggccagcctggccaacgtaacaagacccagtctctac-------aaaaaataagaacttagccaggagtggtggcg--cgccggtcgtcccagccgctcgggaggctgaggcgggaggatcgcccgagcccagaaggtcgaggctgccatgagctaggatcgcac--cacggcactccagcctgggcagcagagcgagaccctgtctgaa- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 162888 390 + 74645514 AGGGTTGGATTGTCCTTAATATGTAATGTCTACGAGGCATCCCAATCAGAAAATAACCTTGGCAGTTCTCCACAGGATTCCGG---GTGGAGATAAAATCTGAGGCTTT--------------AACGAC------TTATCGTTAACgttggcggctcatgcctgtatcccggtactttgggaggctgcgcaggaggatcgcctgaggag-tttgaggccagcctggccaacgtaacaagacccagtctctac-------aaaaaataagaacttagccagaagtggtggcg--cacctgtcgtcccagccgctcgggaggctgaggtgggaggatcgcccgagcccagaaggtcgaggctgccgtgagctaggATCGCaa--cacggcactccagcctgggcagcggagcgagaccctgtctgaa- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 152821 392 + 75148670 AGGGTTGGATTGTCCTTAATACGTAATGTCTACGAGGCATCCCAGTCAGAAAATAACCTTGGCAGTTCTCCACAGGATTCCGG---GTGGAGAAAAAATCTGAGGCTTC--------------AATGAC------TTGTCGTTAAGGTTggcggctcacgcctgcatcccggtactttgggaggctgcgcaggaggatcgcctgaggag-tttgaggccagcctggccaacgtaacaagacccagtctctac-------agaaaataagaacttagccagcagtggtggcg--tgcctgtcgtcccagccgctcgggaggctgaggggggaggatcgcccgagcccagaaggtcaaggctgccgtgagctaggatcgcaccacacggcactccagcctgggctgcggagcgagaccctgtctgaa- i chlSab2.chr16 C 0 I 14 s calJac3.chrUn_GL286409 968852 417 - 1291538 AGGGTTGGATTATCCTTCATATGTCATGTCTACAAGGCATCCAAGTCAGAAAATAA-CTTGACAGTCCTCTGTAGGACTTTATCTCTTGGAGATAAAATCTGAGGCTTT------TAAGAACTAACGACTTAACTTTACCGTCAAGGTTggcggctcacacctgtttcccagtacttagggaagctgagcagggggatcacttgaggagttttgaggtcagcctgggcaacataacaagacccagtctctacaaaaaacagaaaataaaaatttatccaggagtggtggcatgcgcctctagtcccagccactcgggggactgagatgggaagatcacacgagcccagaaggttgaggctgccatgagctaagatcccac--cactgcactccagcctggacagcagagcgagatcccatctcaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e ponAbe2.chr17 130287 431 + 73212453 M e panTro4.chr17 246748 4334 + 82630442 M a score=3073.000000 s hg38.chr17_GL383563v3_alt 272662 4 + 375691 aaaa s nomLeu3.chr19 252157 4 - 81552678 aaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 163202 3 + 80904711 -aaa i rheMac3.chr16 C 0 I 32 s macFas5.chr16 168946 3 + 80997621 -aaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 163278 3 + 74645514 -aaa i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 969269 4 - 1291538 aaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153213 14 + 75148670 I e ponAbe2.chr17 130287 431 + 73212453 M e panTro4.chr17 246748 4334 + 82630442 M a score=3874.000000 s hg38.chr17_GL383563v3_alt 272666 6 + 375691 acaatc s nomLeu3.chr19 252161 6 - 81552678 acaaaa i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 168949 6 + 80997621 acaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 163281 6 + 74645514 acaaaa i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 969273 6 - 1291538 acaaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153213 14 + 75148670 I e rheMac3.chr16 163205 32 + 80904711 I e ponAbe2.chr17 130287 431 + 73212453 M e panTro4.chr17 246748 4334 + 82630442 M a score=4970.000000 s hg38.chr17_GL383563v3_alt 272672 10 + 375691 acg---aaaaaaa---- s nomLeu3.chr19 252167 13 - 81552678 acgaaaaaaaaaa---- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 168955 10 + 80997621 acg---aaacaaa---- i macFas5.chr16 C 0 I 5 s papAnu2.chr16 163287 10 + 74645514 acg---aaacaaa---- i papAnu2.chr16 C 0 I 5 s chlSab2.chr16 153227 10 + 75148670 aca---aaaaaac---- i chlSab2.chr16 I 14 C 0 s calJac3.chrUn_GL286409 969279 14 - 1291538 aca---aaacaaaacaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e rheMac3.chr16 163205 32 + 80904711 I e ponAbe2.chr17 130287 431 + 73212453 M e panTro4.chr17 246748 4334 + 82630442 M a score=141717.000000 s hg38.chr17_GL383563v3_alt 272682 64 + 375691 aaaagaTTTAACAACTTTGCAATGAATTAGATCACCCAGCAGTTATAAGAAAGAGGTTGGGGGG s ponAbe2.chr17 130725 64 + 73212453 AAAAGATTTAACAACTTAGCAACGAATTAGATCACCCAGCAGTTATAAGAAAGAGGTGGAGGGG i ponAbe2.chr17 M 431 C 0 s nomLeu3.chr19 252180 64 - 81552678 aaaaGATTTAACAACTTAGCAACGAATTAGATCACCCAGCAGTTATAAGAAAGAGGTGGAGGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 163237 64 + 80904711 AAAAGATTTGACAACTTAGGAATGAACTCGATCACCCAGCCGTTACAAGAAAGAGGTGGAGGGG i rheMac3.chr16 I 32 I 1 s macFas5.chr16 168970 64 + 80997621 aaaaGATTTGACAACTTAGGAATGAATTCGATCACCCAGCCGTTATAAGAAAGAGGTGGAGGGG i macFas5.chr16 I 5 I 1 s papAnu2.chr16 163302 64 + 74645514 aaaagatttgaCAACTTAGGAATGAATTTGATCACCCAGCAGTTATCAGAAAGaggtggagggg i papAnu2.chr16 I 5 I 1 s chlSab2.chr16 153237 64 + 75148670 aaaaGACTTGACAACTTAGGAATGAATTCGATCACCCAGCCGTTATCAGAAAGAGGTGGGGGGG i chlSab2.chr16 C 0 I 172 s calJac3.chrUn_GL286409 969293 64 - 1291538 aaAAGATTTAACAACTAAGGAATGAATTAGATCCCCCAGCAGTTATAAGAAACAGGTGGAGGGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e panTro4.chr17 246748 4334 + 82630442 M a score=12285.000000 s hg38.chr17_GL383563v3_alt 272746 9 + 375691 CAGGGAGGA s ponAbe2.chr17 130789 9 + 73212453 GAGGGAGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252244 9 - 81552678 CAGGGAGGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 163302 8 + 80904711 C-GGGAGGA i rheMac3.chr16 I 1 C 0 s macFas5.chr16 169035 9 + 80997621 CAGGGAGGA i macFas5.chr16 I 1 C 0 s papAnu2.chr16 163367 9 + 74645514 cagggagga i papAnu2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 969357 9 - 1291538 CAAGGAGAA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153301 172 + 75148670 I e panTro4.chr17 246748 4334 + 82630442 M a score=3240.000000 s hg38.chr17_GL383563v3_alt 272755 3 + 375691 AGG s ponAbe2.chr17 130798 3 + 73212453 ACG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252253 3 - 81552678 AGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 163310 3 + 80904711 AGG i rheMac3.chr16 C 0 I 1 s macFas5.chr16 169044 3 + 80997621 AGG i macFas5.chr16 C 0 I 1 s calJac3.chrUn_GL286409 969366 3 - 1291538 AGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e panTro4.chr17 246748 4334 + 82630442 M a score=14997.000000 s hg38.chr17_GL383563v3_alt 272758 24 + 375691 CTGTA----CTGAGGTTTTAATAATTAT s ponAbe2.chr17 130801 24 + 73212453 CTGTA----CTGACGTTTTAATAATTAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252256 24 - 81552678 CTGTA----TTGAGGTTTTAATAATTAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 163314 24 + 80904711 CTGTG----TCGACGTTTTaataattat i rheMac3.chr16 I 1 I 135 s calJac3.chrUn_GL286409 969369 28 - 1291538 CTGCATTGTTTGACTTTTTaataattag i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e macFas5.chr16 169047 1 + 80997621 I e panTro4.chr17 246748 4334 + 82630442 M a score=9582.000000 s hg38.chr17_GL383563v3_alt 272782 22 + 375691 TGAGCAGTGACCGTGTCTCAGG s ponAbe2.chr17 130825 22 + 73212453 TGAGCAGTGACCATATTTCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252280 22 - 81552678 TGAGCAGTGACCATGTTTCAGG i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 969397 22 - 1291538 tgagcagttcccatgattcagg i calJac3.chrUn_GL286409 C 0 I 7 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e panTro4.chr17 246748 4334 + 82630442 M a score=13470.000000 s hg38.chr17_GL383563v3_alt 272804 64 + 375691 AAAGAGAT----GGGGAGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTT s ponAbe2.chr17 130847 67 + 73212453 AAAGAGGTGG-GGGGGAGGGAGGAATGCTGTACTGACTTTTtaataattattcagcagtgaccatgtt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252302 68 - 81552678 AAAGAGGTGGAGGGGCAGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e panTro4.chr17 246748 4334 + 82630442 M a score=1375.000000 s hg38.chr17_GL383563v3_alt 272868 17 + 375691 TCAGGAAAGAGATGGGG s nomLeu3.chr19 252370 17 - 81552678 TCAGGAAAGAGGTGGAG i nomLeu3.chr19 C 0 T 142 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=5930.000000 s hg38.chr17_GL383563v3_alt 272885 69 + 375691 AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTCAGGAAAGAGGTGGGG s nomLeu3.chr19 252245 69 - 81552678 AGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTCAGGAAAGAGGTGGAG i nomLeu3.chr19 T 142 T 69 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=5470.000000 s hg38.chr17_GL383563v3_alt 272954 63 + 375691 AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTCAGGAAAGAG s nomLeu3.chr19 252245 63 - 81552678 AGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTCAGGAAAGAG i nomLeu3.chr19 T 69 I 4 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=10318.000000 s hg38.chr17_GL383563v3_alt 273017 132 + 375691 TGGGGCAGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTCAGGAAAGAGATGGGG----AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTCAGG s nomLeu3.chr19 252312 136 - 81552678 AGGGGCAGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTCAGGAAAGAGGTGGAGGGGCAGGGAGGAAGGCTGTATTGAGGTTTTaataattactgagcagtgaccacgtttcagg i nomLeu3.chr19 I 4 T 219 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=4988.000000 s hg38.chr17_GL383563v3_alt 273149 66 + 375691 AAAGAGATGGGG----AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTC s nomLeu3.chr19 252229 70 - 81552678 AAAGAGGTGGAGGGGCAGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTC i nomLeu3.chr19 T 219 T 73 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=5148.000000 s hg38.chr17_GL383563v3_alt 273215 69 + 375691 AGGAAAGAGATGGGG----AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTC s nomLeu3.chr19 252226 73 - 81552678 AAGAAAGAGGTGGAGGGGCAGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTC i nomLeu3.chr19 T 73 T 73 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=6332.000000 s hg38.chr17_GL383563v3_alt 273284 84 + 375691 AGGAAAGAGATGGGG----AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTCAGGAAAGAGATGGGG s nomLeu3.chr19 252226 88 - 81552678 AAGAAAGAGGTGGAGGGGCAGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTCAGGAAAGAGGTGGAG i nomLeu3.chr19 T 73 T 69 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=4493.000000 s hg38.chr17_GL383563v3_alt 273368 54 + 375691 AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGGGCAGTGACCGTGTCTC s nomLeu3.chr19 252245 54 - 81552678 AGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTC i nomLeu3.chr19 T 69 T 73 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=6332.000000 s hg38.chr17_GL383563v3_alt 273422 84 + 375691 AGGAAAGAGATGGGG----AGGGAGGGAGGCTGTACTGAGGTTTTAATAATTATTGAGCAGTGACCGTGTCTCAGGAAAGAGATGGGG s nomLeu3.chr19 252226 88 - 81552678 AAGAAAGAGGTGGAGGGGCAGGGAGGAAGGCTGTATTGAGGTTTTAATAATTATTGAGCAGTGACCATGTTTCAGGAAAGAGGTGGAG i nomLeu3.chr19 T 73 I 77 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=651.000000 s hg38.chr17_GL383563v3_alt 273506 8 + 375691 AGGGAGGG s nomLeu3.chr19 252391 8 - 81552678 AGGGAGGA i nomLeu3.chr19 I 77 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e papAnu2.chr16 163376 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=873.000000 s hg38.chr17_GL383563v3_alt 273514 3 + 375691 AGG s nomLeu3.chr19 252399 3 - 81552678 AGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 163376 3 + 74645514 agg i papAnu2.chr16 C 0 I 1 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169047 1 + 80997621 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=17638.000000 s hg38.chr17_GL383563v3_alt 273517 41 + 375691 CTGTACTGAGGTTTtaataattattgagcagtgaccgtgtc s nomLeu3.chr19 252402 41 - 81552678 CTGTATTGAGGTTTTaataattactgagcagtgaccacgtt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 169048 41 + 80997621 CTGTGTCGACGTTTTaataattatggagcagggaccacgtt i macFas5.chr16 I 1 C 0 s papAnu2.chr16 163380 41 + 74645514 ctgtattgacattttaataattatggAGCAGGGACCACGTT i papAnu2.chr16 I 1 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e rheMac3.chr16 163338 135 + 80904711 I e ponAbe2.chr17 130914 0 + 73212453 C e panTro4.chr17 246748 4334 + 82630442 M a score=7423.000000 s hg38.chr17_GL383563v3_alt 273558 11 + 375691 tcaggcaccgt s ponAbe2.chr17 130914 11 + 73212453 tcaggcaccgt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252443 11 - 81552678 tcaggcaccgt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 169089 10 + 80997621 tcaggcaccg- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 163421 10 + 74645514 TCAGGCACCG- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 969419 7 - 1291538 I e chlSab2.chr16 153301 172 + 75148670 I e rheMac3.chr16 163338 135 + 80904711 I e panTro4.chr17 246748 4334 + 82630442 M a score=109801.000000 s hg38.chr17_GL383563v3_alt 273569 125 + 375691 tttaagagtttatcacatactttcctcattgcaatccttgcaaccg-cccccgagataggtat---tattattcccgacttccaggtgagagacctgaagcagacagaggtgagggaatgagcccaggc s ponAbe2.chr17 130925 125 + 73212453 tttaagagcttatcacatgctttcctcattgcaatccttacaacca-cccccgagataggtac---tattattcccaacttccaggtgagagagctaaggcagacagaggtgagggaatgagcccaggc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252454 128 - 81552678 tttaagagcttaccacatacttgcctcattgtaatccttacagcca-cccccgagataggtactattattattccccacttccaggtgagagagctaaggcagacagaggcgagagaatgagtccaggc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 169099 109 + 80997621 tttaagagcttatcacgtactttcctcgttgcagtccttacaacca--ccccgaggcaggtactatgattattcccaacgt-caggtgagaaagccgaggcagagagaggtG----------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 163431 110 + 74645514 TTTAAGAGCTTATCGCATACTTTCCTCATTGCAATCCTTACAACCA--CCCCGAGGCAGGTACTATGATGACTCCCAACGTCCAGGTGAGAAAGCCGAGGCAGAGAGAGGTG----------------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 969426 129 - 1291538 tctaagagcatatcacatactttcctcaatgcaatccttacagccaccttccgagataggcacgattattattcccaacttccaggtgagaaagcagaggcagagaggagGAAGAGGATGAGCCTGAGC i calJac3.chrUn_GL286409 I 7 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153301 172 + 75148670 I e rheMac3.chr16 163338 135 + 80904711 I e panTro4.chr17 246748 4334 + 82630442 M a score=1000.000000 s hg38.chr17_GL383563v3_alt 273694 1 + 375691 c s ponAbe2.chr17 131050 1 + 73212453 c i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252582 1 - 81552678 c i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 153473 1 + 75148670 C i chlSab2.chr16 I 172 C 0 s calJac3.chrUn_GL286409 969555 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e papAnu2.chr16 163541 0 + 74645514 C e rheMac3.chr16 163338 135 + 80904711 I e macFas5.chr16 169208 0 + 80997621 C e panTro4.chr17 246748 4334 + 82630442 M a score=481150.000000 s hg38.chr17_GL383563v3_alt 273695 245 + 375691 gggaggacgcagggaggcagaatccagcgttctaaacctctgcacagtcctgtaAGTTACTTTTTAAAATTCCGTCAAGAGGAAACTAGTAAGACCAAGAGAAGCTAACTCATTAAAGTCTGTAATCTGCTGAGGCTCAAACAACTGAGGCACTGAGGCTGGTACCCCAGGCCACCCCCACCAACAACATAACCAGAGGGGAAGGAAGTCAGGCCCCTTCTCA-CTCTGAGCAGCT-GGTGCCTGGG----------------------- s ponAbe2.chr17 131051 246 + 73212453 cggagaatgcagggagccagagtccagcgttctaaacctctgcACAGTAGTGTAAGTTACTTTTTAAAATTCCGGGGAAAGAAAACTAGTAAGACCAAGAGAAGCTAGCTCATTAAATTCTGTAATCTGCTGAGGCTCAAACAACTGAGGCACTGAGGCTGGTACCCCAGGCCACCCCCATCACCAACATAACCAGAGGGGAAGGAAGTCAGGCCCCTTCTCA-CTCTGAGCAGCTGGGTGCCTGGG----------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252583 229 - 81552678 aggtgaacgcagggagccagagtccagtgttctaaacctctgcacggtactgtAAGTTACTTTTTAAAATTCCGCGAAAAGAAAACTAGTAAGACCAAGAGAAGCTAGCTCGTTAAATTCTGTAATCTGCTGAGGCTCAAACA--------ACTGAGGCTGGTACCCCAGGC---------CAACAACATAACCAGAGGGGAAGGAAGTCAGGCCCCTTCTCA-CTCTGAGCAGCTGGGTGCCCGGG----------------------- i nomLeu3.chr19 C 0 I 54 s rheMac3.chr16 163473 238 + 80904711 GGGAGAACCCAGGAAGCCAGAGTCCGGTGTTCCAAACCTCTGCACAGTAGTGGAAGTTACTTTTTAAAATTCCGAGGAAAGAAAACACGTAAGACCAAGAGAAGCTAAATCATTAAATTCTGGAATCTGCTGAGGCTCAGACC--------ACTGAGGCTGGTACCCCAGGCCGCCCCGACCAACGCCATAACCAGAGGGGAAGGAAGTCAGGCCCCTTCTCACCTCTGAGCGGCT-GGTGCCTGGG----------------------- i rheMac3.chr16 I 135 I 330 s macFas5.chr16 169208 237 + 80997621 -GGAGAACCCAGGAAGCCAGAGTCCGGTGTTCCAAACCTCTGCACAGTAGTGGAAGTTACTTTTTAAAATTCCGAGGAAAGAAAACGAGTAAGACCAAGAGAAGCGAAATCATTAAATTCTGGAATCTGCTGAGGCTCAGACC--------ACTGAGGCTGGTACCCCAGGCCGCCCCGACCAACGACATAACCAGAGGGGAAGGAAGTCAGGCCCCTTCTCACCTCTGAGCGGCT-GGTGCCTGGG----------------------- i macFas5.chr16 C 0 I 57 s papAnu2.chr16 163541 237 + 74645514 -GGAGAACCCGGGAAGCCAGAGTCCGGTGTTCCAAACCTCTGCACAGTACtataagttactttttaaaattccgaGGAAAGAAAACGAATAAGACCAAGAGAAGCTAAATCATTAAATTCTGGAATCTGCTGAGGCTCAGACC--------ACTGAGGCTGGTACCCCAGGCCGCCCCGACCAACGACATAACCAGAGGAGAAGGAAGTCAGGCCCCTTCTCACCTCTGAGCGGCT-GGTGCCTGCG----------------------- i papAnu2.chr16 C 0 I 54 s chlSab2.chr16 153474 238 + 75148670 GGGAGAACCCAGGAAGCCAGAGTCCGGAGTTCCAAACCTCTGCACAGTAGTGGAAGTTACTTTTTAAAATTCCGAGGAAAGAAAACGAGTAAGACCAAGAGAAGCTAAATCATTAAATTCTGGAATCTGCTGAGGCTCAGACC--------ACTGAGGCTGGTACCCCAGGCCGCCCCGACCAACGACATAACCAGAGGGGAAGGAAGTCAGGCCCCTTCTCACCTCTGAGCGGCT-GGTGCCTGGG----------------------- i chlSab2.chr16 C 0 I 352 s calJac3.chrUn_GL286409 969556 252 - 1291538 AGGAGAACCCAGGG-GCCAGAGTCCAGTGCTCT-AATGTCTGCACAGTAGTGTAAGTTACTTTTTAAAATTCTGGGAAAAGAAAACTAGTAAGACCAAGAGAAGCCAGCTCGTTAAATTCTGGAATCTGCAGAGGCTCAAATA--------GCTGAGGCTGGTACCCAACACTGCCCCCA-------CATAACTGGAGGGGAAGGAGGTCAGGCCCCTTCTCGATTCTGAGCAGCG-AGTGCCTGGCTGGGGCTCACGTCTGGGATGCTG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e panTro4.chr17 246748 4334 + 82630442 M a score=124906.000000 s hg38.chr17_GL383563v3_alt 273940 141 + 375691 -------------------------ATTTTAGG--ctgtcacgacgattccacccggccagggcaggcccgaaccggccggaggccacaggagaaccaat------gagcctggctggactcctgcaaaccttgagggacgccgagattcacattcactgaattttcatgccac s ponAbe2.chr17 131297 141 + 73212453 -------------------------ATTTTAGG--ctgtcacaaggatccaacccagccagggcagggccgaaccagccagaggctacaggagaaccagt------gagcgtggctgggctcctgtaaaccttgagggacgctgagatttacattcactgaattttcatgccac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 252866 141 - 81552678 -------------------------attttagg--ctgtcacaacgattcaacccagccagggcagggccgaaccagccggaggccacggcagaaccagt------gagcatggctgggctcctgtaaaccctgagggacgctgagatttacattcactgaatttgaattccaC i nomLeu3.chr19 I 54 I 135 s macFas5.chr16 169502 146 + 80997621 -------------------------gttttagg--ctgttataaggattctatccagccagggccgggctgaa-cggccgcaggccacaggagaacgagtgagcgagagcgtggctgggctccaggaaacctcgtaggacactgagatttacagtcactgaagtttcatgccac i macFas5.chr16 I 57 C 0 s papAnu2.chr16 163832 146 + 74645514 -------------------------GTTTTAGG--CTGTTATAAGGGTTCTATCCAGCCAGGGCCGGGCCGAA-CGGCCGCAGGCCACAGGAGAACGAGTGAGCGAGAGCGTGGCTGGGCTCCAGGAAACCTCGAAGGACACTGAGATTTACAGTCACTGAAGTTTCATGCCAC i papAnu2.chr16 I 54 C 0 s calJac3.chrUn_GL286409 969808 164 - 1291538 ATTGgtgaagggccagagagttagcatcttaggctctatcacaaccattcaacccggccagggcagcactgagccagctg-aggccacaggagaacaa--------gagtgtggctgtgct-cagcaaacctttagggacactgagatttacattcacatagtttttgggtcac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153712 352 + 75148670 I e rheMac3.chr16 163711 330 + 80904711 I e panTro4.chr17 246748 4334 + 82630442 M a score=31789.000000 s hg38.chr17_GL383563v3_alt 274081 65 + 375691 --gtgacactcttcttctttt-gttccctcccgccctgccccacggagccatttacaaacat-aaaacc s ponAbe2.chr17 131438 57 + 73212453 --gtgatac---tcttctttt-gttccctcccaccccgcc-----gagccatttacaaacgt-aaaacc i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 169648 57 + 80997621 --gtgatct---tcttctttt-gttccctcccacccc-cc-----gagctatttacaaatgtaaaaacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 163978 57 + 74645514 --ATGATCT---TCTTCTTTT-GTTCCCTCCCACCCC-CC-----GAGctatttacaaatgtaaaaacc i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 969972 58 - 1291538 agatattct---ccttcttttggttccctcccaccc--ct-----gagccatttacaaatgt-gaaacc i calJac3.chrUn_GL286409 C 0 I 2 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e chlSab2.chr16 153712 352 + 75148670 I e rheMac3.chr16 163711 330 + 80904711 I e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=-1083.000000 s hg38.chr17_GL383563v3_alt 274146 2 + 375691 at s ponAbe2.chr17 131495 2 + 73212453 at i ponAbe2.chr17 C 0 I 12 s macFas5.chr16 169705 1 + 80997621 a- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164035 1 + 74645514 A- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e rheMac3.chr16 163711 330 + 80904711 I e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=-642.000000 s hg38.chr17_GL383563v3_alt 274148 44 + 375691 ttttaaaccatttttaaaTGATTTAAAACCTGTTTCTGTACCAA s macFas5.chr16 169706 13 + 80997621 tcctagctca-------------------------------cag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164036 13 + 74645514 TCCTAGCTCA-------------------------------CAG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e rheMac3.chr16 163711 330 + 80904711 I e nomLeu3.chr19 253007 135 - 81552678 I e ponAbe2.chr17 131497 12 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=19643.000000 s hg38.chr17_GL383563v3_alt 274192 60 + 375691 GTGGTACAGAAATAGGGGCCAGCCCCCGGTCCAGTGCCACGAGCTCCTAGGGCCAGAGTG s ponAbe2.chr17 131509 59 + 73212453 gtggtatggaaacaggGGCC-GCCCCCGGTCCAGCACCACGAGCTCCAGGGGCCAGAGTG i ponAbe2.chr17 I 12 I 2 s macFas5.chr16 169719 57 + 80997621 gTGCTACCG-AATCGGGGCC-ACCCCC-GTCCAGCGCCACGAGCTCCTGGGGCCCGAGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164049 55 + 74645514 GTGCTACGG-AATCGGGGCC-GCCCCC-GTCCAGCGCCACGAGCTCC--AGGCCCGGGCG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e rheMac3.chr16 163711 330 + 80904711 I e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=1302.000000 s hg38.chr17_GL383563v3_alt 274252 7 + 375691 TAAGAGA s macFas5.chr16 169776 7 + 80997621 CATGAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164104 7 + 74645514 CAAGAGA i papAnu2.chr16 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e rheMac3.chr16 163711 330 + 80904711 I e nomLeu3.chr19 253007 135 - 81552678 I e ponAbe2.chr17 131568 2 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=0.000000 s hg38.chr17_GL383563v3_alt 274259 544 + 375691 GGCACAGGGCGGGAGGGGGACAGGGCGAGAGGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGAGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGGACAGGGCGGGAGGGGGACAGGGCGAGAGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGGGCGGGAGGGGGACAGG e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15719618 939 - 61074082 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e papAnu2.chr16 164111 0 + 74645514 C e rheMac3.chr16 163711 330 + 80904711 I e macFas5.chr16 169783 0 + 80997621 C e nomLeu3.chr19 253007 135 - 81552678 I e ponAbe2.chr17 131568 2 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=300.000000 s hg38.chr17_GL383563v3_alt 274803 3 + 375691 GCG s canFam3.chr9 15720557 3 - 61074082 GCG i canFam3.chr9 I 939 C 0 e mm10.chr11 75897286 1012 + 122082543 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e papAnu2.chr16 164111 0 + 74645514 C e rheMac3.chr16 163711 330 + 80904711 I e macFas5.chr16 169783 0 + 80997621 C e nomLeu3.chr19 253007 135 - 81552678 I e ponAbe2.chr17 131568 2 + 73212453 I e panTro4.chr17 246748 4334 + 82630442 M a score=3644.000000 s hg38.chr17_GL383563v3_alt 274806 16 + 375691 AGAGGGGGACAGGGCG s ponAbe2.chr17 131570 16 + 73212453 AGAGAGGAACAGGGCG i ponAbe2.chr17 I 2 C 0 s canFam3.chr9 15720560 16 - 61074082 GGAGAGGAACAGGGCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e papAnu2.chr16 164111 0 + 74645514 C e rheMac3.chr16 163711 330 + 80904711 I e macFas5.chr16 169783 0 + 80997621 C e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=1184.000000 s hg38.chr17_GL383563v3_alt 274822 5 + 375691 AGAGG s ponAbe2.chr17 131586 5 + 73212453 AGAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 164041 5 + 80904711 AGAGA i rheMac3.chr16 I 330 C 0 e mm10.chr11 75897286 1012 + 122082543 I e canFam3.chr9 15720576 0 - 61074082 C e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e papAnu2.chr16 164111 0 + 74645514 C e macFas5.chr16 169783 0 + 80997621 C e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=10608.000000 s hg38.chr17_GL383563v3_alt 274827 16 + 375691 GGGACAGGGTCATCAG s ponAbe2.chr17 131591 16 + 73212453 GGAACAGGGTCATCAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 164046 15 + 80904711 GGAACAGGGTCACCG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 169783 15 + 80997621 GGAACAGGGTCACCG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164111 14 + 74645514 GGAACAGGGTCACC-- i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15720576 16 - 61074082 TAGGCAGGGTCCCCAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e chlSab2.chr16 153712 352 + 75148670 I e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=241648.000000 s hg38.chr17_GL383563v3_alt 274843 212 + 375691 GGTGCTTAGGGTGGGCTCCGGGGCGTCTGCACCACCAGGCGCACAGCCCAGGAGGTGGCAGGAGTCATCCGTTCTGGAAAC--------AGCCAGAGGTACAACCTCGTGTCCAGGCACCGGCCGAGTTGGGACTCAGGGTCAAAGCC-AAGCTGAGGCAACGTCGAGATGGAGCGTAACAGCCCTCAG--CCTGCACCTGCCACACTGCGGAGGCCCCACAG- s ponAbe2.chr17 131607 205 + 73212453 GGTGCTTTGGGTGGGCTCTGGGGCGTCTGCACCACCAGGCGCACAGCCCAGGAGGTGGCAGGAGTCATCTGTTCTGGAAAC--------AGCCAGAGGTACAGCCTCGTGTCTAGGCACCGGCCGAGTTGGGGCTCA-------AGCC-AAGCTGAGGCAACGTCGAGATGGAGCGTAACAGCCCTCAG--CCTGCACCTGCCACACTGCGGAGGCCCCACGG- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 164061 211 + 80904711 GGTGCTTGGGGAGGGCTCCGGGGCGTCTGCACCAGCAGGCACACAGCCCGGGAGGTGGCCGGAGTCACCAGTTCTGGAAAC--------AGCCAGAGGTTCGGCCTCGTGTCTCAGCACTGGCCCAGGTGGGGCTCAGGGTCGAAGCCGGAGCCGAGGCGAAGTCGAGATGGAGCACAATAGCCCCGAG---CTGCGCCCGCCGCACTGCGGAGCCCCCAC-G- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 169798 212 + 80997621 GGTGCTTGGGGAGGGCTCCGGGGCGTCTGCACCAGCAGGCACACAGCCCGGGAGGTGGCCGGAGTCACCAGTTCTGGAAAC--------AGCCAGAGGTTCGGCCTCGTGTCTCAGCACTGGCCCAGGTGGGGCTCAGGGTCGAAGCCGGAGCCGAGGCGAAGTCGAGATGGAGCACAACAGCCCTGAA--CCTGCGCCCGCCGCACTGCGGAGCCCCCAC-G- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164125 211 + 74645514 GGTGCTTGGGGAGGGCTCCGGGGCGTCTGCACCAGCAGGCACACAGCCCGGGAGGTGGCCGGAGTCACCAGTTCTGGAAAC--------AGCCAAAGGTTCGGCCTCGTGTCTCAGCACTGGCCCAGGTGGGACTCAGGGTCAAAGCCTGAGCCGAGGCGAAGTTGAGGTGGAGCACAACAGCCCCGAG---CTGCGCCCGCCGCACTGCAGAGCTCCCAC-A- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154064 211 + 75148670 GGTGCTTGGGGAGGGCTCCAGGGCGTCTGCACCAGCAGGCACACAGCCCGGGAGGCGGCCAGAGTCACCAGTTCTGGAAAC--------AGCCAGAGGTTTGGCCTCGTGTCTCAGCACTGGCCGAGGAGGGGCTCAGGGTCAAAGCCCGAGCCGAGGCGAAGTCGAGATGGAGCACAACAGCCCTGAG---CTGCGCCCACCGCACTGCGGAGCCCCCAC-G- i chlSab2.chr16 I 352 C 0 s canFam3.chr9 15720592 152 - 61074082 GATGCTTGGTATAGGCTCCAGAGTG----------------CACAGCCT-GTAGGGGACAGGAGTTGTGAATTCTGGAAACACGTTCAGAGCTGGAAGTGCAG------------ACGCTGGCA-------------------------GAGTCAGGGCACGGTCAAG------------AACCCTGAGCTCTTGGTTCTG-----CTGAAGGGGCTCCAC-AA i canFam3.chr9 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e calJac3.chrUn_GL286409 970030 2 - 1291538 I e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=76002.000000 s hg38.chr17_GL383563v3_alt 275055 43 + 375691 GGACAATCCGGGAGGGTGGGGTGGTGCCTGCCTGGCAGCTGCG s ponAbe2.chr17 131812 43 + 73212453 GGACAATCCAGGAGGATGGGGTGGTGCCTGCCTTGCAGCTGAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 164272 42 + 80904711 GGACAGTCCAGGAGGGT-GGGTGGTGCCTGCCTCGCAGCCGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170010 42 + 80997621 GGACAGTCCAGGAGGGT-GGGTGGTGCCTGCCTCGCAGCCGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164336 42 + 74645514 GGACAGTCCAGGAGGGT-GGGTGGTGCCTGCCTTGCAGCTCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154275 42 + 75148670 GGACAGTCGAGGAGGGT-GGGTGGTGCCTGCCTCGCAGCTGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 970032 43 - 1291538 GGAGAGTCCAGGAGGACAGGGTGGTGCCTGCCTCACAGCTGAG i calJac3.chrUn_GL286409 I 2 C 0 s canFam3.chr9 15720744 42 - 61074082 GGGCCAATCAGGAGGAT-GGGTGGTGCATATCTCATGGCTGGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75897286 1012 + 122082543 I e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=149493.000000 s hg38.chr17_GL383563v3_alt 275098 97 + 375691 GGGGCTGGGTAGGGAAGGGCTACTCCACCCTGGAGGCCCAGCTCACACCAACCTCCTAGCCCCT----------------GACGTCCCACCAGGCAGCTTCACAA--GGTTACAG-- s ponAbe2.chr17 131855 97 + 73212453 GGGGCCGGGTAGGGAAGGGCTACTCCACCCTGGAGGCGCAGCTCACACCAACCTCCTAGCCCCT----------------GACGTCCCACCAGGGAGCTTCACGA--GGTTACAG-- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 164314 96 + 80904711 -AGGCTGGGTACGGAAGGACTAATCCATCCTGGAGGCCCAGCTCACACCAGCCTCCTCTGCCCC----------------GACGTCCCCCCCGGCAGCTTCACCA--GGTTACAC-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170052 96 + 80997621 -AGGCTGGGTACGGAAGGACTAATCCATCCTGGAGGCCCAGCTCACACCAGCCTCCTCTGCCCC----------------GACGTCCCCCCCGGCAGCTTCACCA--GGTTACAC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164378 96 + 74645514 -AGGCTGGGTAGGGAAGGACTAATCCATCCTGGAGGCCCAGGTCACACCAGCCTCTTCTGCCCC----------------GACGTCCCACCCGGCAGCTTCACCA--GGTTACAG-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154317 95 + 75148670 --GGCCGGGTACGGAAGGACTAATCCAGCCTGGAGGCCCGGCTCACACCCCCCTCCTCTGCCCC----------------AACGTCCCACCCGGCAGCTTCCCCA--GGTTACAG-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 970075 97 - 1291538 -GGGCTTGGCAGGGAAGGAACACTCCACCCTACAGGCCCAGCTCACACCAGCCTCCTCTGCCCC---------------TGACATCCCACGGGGCAGCTCCACCA--GGTTACAG-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75898298 98 + 122082543 GGAGTTAGGCAGGGAAGA---------------AGGCTTAGCTCATATTCTCTTCATATTCCTCTTATCCTTCTGTTCCTCATGCCCCACTGGACAGCATTGTGG--GGTCACAA-- i mm10.chr11 I 1012 C 0 s canFam3.chr9 15720786 82 - 61074082 -----------GAGAA----------ACCCCCCAGGCCTAGCTCTCTGCAATGTCCTCTGCCCC--------------CCAACACCCTACCAGGCAGCTTCTCTGACATTTATATGG i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 253007 135 - 81552678 I e panTro4.chr17 246748 4334 + 82630442 M a score=248909.000000 s hg38.chr17_GL383563v3_alt 275195 126 + 375691 GTCGGTTCCTTCTCCACTGG-----------ATTCCTCCCACATCGGGTGACCTGACCACACACACGGCAGGTGCCCAGCGGT-GGTCCC--------------AGCCC-----CAACATCTCAAGAGCAG--GACACCCGAGTGG--AGATACTAGGTCA s ponAbe2.chr17 131952 121 + 73212453 GTCGGTTCCTTCTCCATTGG-----------ATTCCTCCCAGATC-AGTAACCTGA-CACACACACGGCAGGTGCCCAGCGGT-GTTCCC--------------AGCCC-----CAACATCTC-ACAGCA---GACACCCGCATGG--AGATACTA-GTCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 253142 126 - 81552678 GTGGGTTCCTTCTCCACTGG-----------ATCCCTCCCACAACGGGTGACCTGACCACACACACGGCAGGTGCCCAGCGGT-GGTCCC--------------AGCCC-----CAACGTCTCAACAGCAG--GACACCCGTGTGG--AGATACTAGGTCA i nomLeu3.chr19 I 135 C 0 s rheMac3.chr16 164410 136 + 80904711 GTCGGTTCCTCCCCAGCTGGATCTCAGTTGCATTCCTCCCGCGTCGGGTGACCTGACCACACACGCGGCAGGTGCCCAGCGGC-GGTCCC--------------GGCCC-----CAGCATCCCAGCAGCAG--GACA-CCGCGTGG--AGACCCCAGGTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170148 136 + 80997621 GTGGGTTCCTCCCCAGCTGGATCTCAGTTGCATTCCTCCCGCGTCGGGTGACCTGACCACACACGCGGCAGGTGCCCAGCGGC-GGTCCC--------------GGCCC-----CAGCATCCCAGCAGCAG--GACA-CCGCGTGG--AGACCCCAGGTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164474 136 + 74645514 GCCGGTTCCTCCCCAACTGGATCTCAGTTGCATTCCTCCCGCGTCGGGTGACCTGACCACACACGCGGCAGGTGCCCAGCGGC-GGTCCC--------------AGCCC-----CAGCATCCCAGCAGCAG--GACA-CCGCGTGG--AGACCCCAGGTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154412 136 + 75148670 GCCGGTTCCTCCCCAGCTGGATCTCAGTTGCATTCCTCCAGCGTTGGGTGACCTGACCACACACGTGGCAGGTGCCCGGCAGC-GGTCCC--------------GGCCC-----CAGCATCTCAGCAGCAG--GACA-CCGCGTGG--AGACCCCAGGTCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 970172 122 - 1291538 GCCGGCTCCTCCTCACCTAG-----------ATTCCTCCCACGT-GGGTGACCTGACCACACACA--GCAGGTGCCCAGGGAT-G-CCCC--------------AGCTT-----CAGCATCTCAACAGCAG--AACACCCACGTAG--AAGTGCTAGGTCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75898396 128 + 122082543 GGTGGTTCCT-------TAG-----TTTTGTGCTACTCTCAGCCTGGATGACCTGGCCACACACA--ACAGGCACCCAGCATCTGGTCCT--------------GGCTCACTGACGGCAT----AGAGAAGCCGACA-CTGAACAGCAGGATGGTAGGCCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15720868 137 - 61074082 ATCAG-TACTTCTCAGTGTG-----------ACTCCTTTACACCTGGGTGATCTGACTATACCTA--GCAGGTACCCAGCCTG-GTTCACCTGCTGTACAGAGAGGCCC-----CAACACTTCAAAAGTAT--GACACCCACGTGG--TGACAAGAAGTCA i canFam3.chr9 C 0 C 0 e panTro4.chr17 246748 4334 + 82630442 M a score=38728.000000 s hg38.chr17_GL383563v3_alt 275321 21 + 375691 CAGGAATGTCTCCA-CACAGAC- s ponAbe2.chr17 132073 22 + 73212453 CAGGACTGTCTCCACCACAGAC- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 253268 21 - 81552678 CAGGAATGTCTCCA-CGCAGAC- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 164546 21 + 80904711 CAGGAGTGTCTCCA-CACAGAC- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170284 21 + 80997621 CAGGAGTGTCTCCA-CACAGAC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164610 21 + 74645514 CAGGAGTGTCTCCA-CACCAAC- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154548 21 + 75148670 CAGGAGTGTCTCCA-CACAGAC- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75898524 21 + 122082543 TGCAAACATCACCC-GACAGGC- i mm10.chr11 C 0 I 1154 s canFam3.chr9 15721005 22 - 61074082 CAGAAATATCTCCA-GGTAGGTC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 970294 0 - 1291538 C e panTro4.chr17 246748 4334 + 82630442 M a score=12075.000000 s hg38.chr17_GL383563v3_alt 275342 5 + 375691 ATTCA s ponAbe2.chr17 132095 5 + 73212453 ATTCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 253289 5 - 81552678 ATTCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 164567 5 + 80904711 ATTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170305 5 + 80997621 ATTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164631 5 + 74645514 ATTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154569 5 + 75148670 ATTCA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15721027 5 - 61074082 ATTTA i canFam3.chr9 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e calJac3.chrUn_GL286409 970294 0 - 1291538 C e panTro4.chr17 246748 4334 + 82630442 M a score=3600.000000 s hg38.chr17_GL383563v3_alt 275347 1 + 375691 G s panTro4.chr17 251086 1 + 82630442 G i panTro4.chr17 M 4334 C 0 s ponAbe2.chr17 132100 1 + 73212453 G i ponAbe2.chr17 C 0 M 566 s nomLeu3.chr19 253294 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 164572 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170310 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164636 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154574 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15721032 1 - 61074082 G i canFam3.chr9 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e calJac3.chrUn_GL286409 970294 0 - 1291538 C a score=306259.000000 s hg38.chr17_GL383563v3_alt 275348 191 + 375691 GCAGGTTCGAGGGAAGAAGACAGCTTCCCGGCCACTCTCCCACCACG-CCCACACCCGGTGGGC-TCCTCTCCTCAACCTGGG-CCCACATTCTCTCCCAGGTTactcacatcac-tcagtcatccctcacatcactcacATCGCCCCATGACATCC--GCCTCTGAGCTGCCAGcctccctccccagcccctt----tct s panTro4.chr17 251087 173 + 82630442 GCAGGTTCGAGGGAAGAAGACAGCTGCCCGGCCACTCTCCCACCACG-CCCACACCTGGTGGGC-TCCTCTCCTCAACCTGGG-CCCACATTCTCTCCCAGGTGACTCACATCAC-TCAGTCACCCC------------------CCCATGACATCC--ACCTCTGAGCTGCCAGcctccctccccagcccctt----tct i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 253295 172 - 81552678 GCAGGTTCGAGGGAAGAAGACAGCTGCCCGGCCACTCTCCCACCACACCCCACACCTGGTGAGC-TCCTCTCCTCAGCCTGGG-CCCACGTTCTCTCCCAGGTTACTCACATCAC-TCAGTCACC--------------------CCCAGGACATCC--GCCTCTGAGCTGCCAGcctccctccccagcccctt----tct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 164573 165 + 80904711 GCCGGCTCGAGGGGAGAAGACAGCCGCCCAGCCACTCTCCCACCACG-CCC-CACCTGGCGGGT-TCCTCTCCTCAACCTGGG-CCCCCATTCTCTCCCAGGTTGCTCACATCAC-TCAGTCACC--------------------CCCACGACATTT--GCCTCTGAGCTGCCAGCCTCCCTGCCCAGCCCC--------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170311 167 + 80997621 GCCGGCTCGAGGGGAGAAGACAGCCGCCCGGCCACTCTCCCACCACG-CCC-CACCCGGCAGGC-TCCTCTCCTCAACCTGGG-CCCCCGTTCTCTCCCAGGTTGCTCACATCAC-TCAGTCACC--------------------CCCACGACATCT--GCCTCTGAGCTGCTAGcctccctgcccagcccctc------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164637 168 + 74645514 GCCGGCTCGAGGGGAGAAGACAGCCGCCCGGCCACTCTCCCACCACG-CCC-CACCTGGCGGGC-TCCTCTCCTCAACCTGGGCCCCCCGTTCTCTCCCAGGTTGCTCACATCAC-TCAGTCAcc--------------------cccacgacatct--gcctctgagctgccagcctccctgcccagcccctc------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154575 174 + 75148670 GCCGGCTCGAGGGAAGAAGACAGCCGCCCGGCCACTGTCCCACCACG-CCC-CACCTGGCGGGC-TCCTCTCCTCAACCTGGG-CCCCCGTTCTCTCCCAGGCTGCTCACATCAC-TCAGTCACC--------------------CCCACAACGTCT--GCCTCTGAGCCGCCAGcctccctgcccggcccctccattcct i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15721033 182 - 61074082 GCAGGTTCAAAGGAAGAAGACAGCTGCCCC-CTACCTTTCCACCATG-CTG-CATGTGGTGGGAGTCTTCTATTCAACCCAGA-CCTTTACTTTCTCCCATGTCACTTCGGTCACATCTGCCCCCCCGCCCGTG-----------GCCCTGACATCCCAACGTCTGGGCTGCTCATCTCCCTCCAGGGTCCCTC----TTT i canFam3.chr9 C 0 I 62 e mm10.chr11 75898545 1154 + 122082543 I e calJac3.chrUn_GL286409 970294 0 - 1291538 C e ponAbe2.chr17 132101 566 + 73212453 M a score=104736.000000 s hg38.chr17_GL383563v3_alt 275539 66 + 375691 tccttccctccctccctccctcctttcttttttttgaaacaggtcacccaggctggagttcagtgg s panTro4.chr17 251260 66 + 82630442 tccttccttccctccctccctcctttcttttttttgaaacaggtcacccaggctggagttcagtgg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 253467 66 - 81552678 tccttccccccctccctccctcctttcttttttttgaaacaggtcacccaggctggagttcagtgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 164738 57 + 80904711 --------TCCCTCCCTCAAACCtttc-tttttttgaaacaggtcacccaggctggagttcagtgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 170478 64 + 80997621 -ccttccttccctccctccctcctttc-tttttttgaaacaggtcacccaggctggagttcagtgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 164805 59 + 74645514 -cct----tccctccctccctccttt--tttttttgaaacaggtcacccaggctggagttcagtgg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154749 65 + 75148670 tccttccttccctccctccctcttttc-ttttttcgaaacaggtcacccaggctggagttcagtgg i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721215 62 - 61074082 I e calJac3.chrUn_GL286409 970294 0 - 1291538 C e ponAbe2.chr17 132101 566 + 73212453 M a score=210401.000000 s hg38.chr17_GL383563v3_alt 275605 125 + 375691 cacaatcttgactcactgcagcctccgcctctggggctcaagccttccaggctcaagcaatcctcagcctcagcctcccaagtagttggaaacgtaactgggcaccaccatgcccagctattttt s panTro4.chr17 251326 125 + 82630442 cacaatcttgactcactgcagcctcctcctctggggctcaagccttccaggctcaagcaatccccagcctcagcctcccaagtagttggaaacgtaactgggcaccaccaggcccagctattttt i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 253533 125 - 81552678 cacaatcttgactcactgcagcctctgcctctggggctcaaggcttccaggctcaagcaatcctcagcctcagcttcccaagtagttggaaatgcaactgggcaccaccatgcccagctattttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 164795 110 + 80904711 cacaatcgtgacccaatgcagcctct---------------gccttccaggctcaagcagtcctcagcctcagcctcccaagtagtgggaaacataactgggcaccaccatgaccagctagtttt i rheMac3.chr16 C 0 I 360 s macFas5.chr16 170542 110 + 80997621 cacaatcatgacccaatgcagcctct---------------gccttccaggctcaagcagtcctcagcctcagcctcccaagtagtgggaaacataactgggcaccaccatgaccggctattgtt i macFas5.chr16 C 0 I 3 s papAnu2.chr16 164864 120 + 74645514 cacaatcgtgactcaatgcagcctccgcctctggggctcaagccttccaggctcaagcag-cctcagcctcagcctcctaagtagtggGAAACATAACTGagcaccaccatggccggctat---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154814 110 + 75148670 cacaatcgtgacccagtgcagcctcc---------------gcctctggggctcgagccgttctcggcctcagcctcccaagtagttggaaacataactgggcaccaccatgaccggctattttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 970294 118 - 1291538 CACAGTCTTGACTCACTTCGAGTCCCACCTCTGGGGCTCAAGccttccaggctca----tcctcccatctcagcctcccaagtagttggaaccgtaagtgcacaccaccatgcccagttttt--- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721215 62 - 61074082 I e ponAbe2.chr17 132101 566 + 73212453 M a score=54121.000000 s hg38.chr17_GL383563v3_alt 275730 35 + 375691 tttttttttttc-agtagagatgaggtctcactaca s panTro4.chr17 251451 36 + 82630442 tttttttttttttggtagagatgaggtctcactaca i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 253658 34 - 81552678 ttttttttctt--ggtagagatgaggtctcactaca i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 170655 35 + 80997621 ttttgttttttt-ggtagagatgaggtctcactaca i macFas5.chr16 I 3 C 0 s papAnu2.chr16 164984 35 + 74645514 tttttttttttc-ggtacagatgaggtctcactaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154924 31 + 75148670 ----tttttttc-ggtagagatgaggtctcactaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 970412 35 - 1291538 tttttttttttt-ggtagagacggggtctcactaca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721215 62 - 61074082 I e rheMac3.chr16 164905 360 + 80904711 I e ponAbe2.chr17 132101 566 + 73212453 M a score=204408.000000 s hg38.chr17_GL383563v3_alt 275765 99 + 375691 ttacccaggctggtctcagactcctggtctcaagcaatcttctcaccttggcctcccaaagtgctaggattacaggtgtgagccactgcgcccgacTTC s panTro4.chr17 251487 99 + 82630442 ttacccaggctggtctcagactcctggtctcaagcagtcttctcaccttggcctcccaaagtgctaggattacaggtgtgagccactgcgcccAACTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 132667 98 + 73212453 ttacccaggct-gtctcagactcctggtctcaagcgatcttctcaccttggcctcccaaaatgctgggattacaggtgtgagccactgcgcccaactTC i ponAbe2.chr17 M 566 C 0 s nomLeu3.chr19 253692 99 - 81552678 ttacccaggctggtctcagactcctggtctcaagcagtcttctcaccttggcctcccaaagtgctgggattacaggtgtgagccacggcgaccAACTTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 170690 86 + 80997621 ttgcccaggctggtctcagactcccgg-------------tctcacctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccgacTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 165019 86 + 74645514 ttgcccaggctggtctcagactcctgg-------------tctcaccttggcctcccaaagtgctgggattacagctgtgagccactgcgcccgacttc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 154955 86 + 75148670 ttgcccaggctggtctcagactcccgg-------------tctcacctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccgacTTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 970447 99 - 1291538 ttgcccaggctggtctcagactcctgggctcaggtaattctctcacctcaacttcccaaagtgctgggattataggtgtgagccactgcgcctgAATTC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721215 62 - 61074082 I e rheMac3.chr16 164905 360 + 80904711 I a score=386180.000000 s hg38.chr17_GL383563v3_alt 275864 195 + 375691 CCCAGCCCCTTTCTGACCCACAGCCTGGGATCCAGCCTGGACTACCTGGAACACATACCCAGCCCCCCTGGAACCCCAGCTCCACCGCCAACATGCCCCACGAGCCCCTTCCCCACATCTGCTCCCACCCCAGACCAGCCCTCCACG-CAGGCCCCACGCACGTGCGCAGCCTGGCCGGTAAGGCCATCAGACCCA s panTro4.chr17 251586 195 + 82630442 TCCAGCCCCTTTCTGACCCACAGGCTGGGATCCAGCCTGGACTACCTGGAACACATACACAGCCCCCCTGGAACGCCAGCCCCACCACCAACATGCCCCACGAGCCCCTTCCCCACATCTGCTCCCACCCCAGACCAGCGCTCCACG-CAGGCCCCACGCACGTGCGCAGCCTGGCCGGTAAGGCCATCAGACCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 132765 194 + 73212453 CCCAGCCCC-TTCTAACCCACAGCCTGGGATCCAGCCTGGACTACCTGGAACACATACACAGCCCCCCTGGAACCCCAGCCCCACCTCCAACATGCCCCACGAGCCCCCTCCCCACATCTGCTCCCACCCCAGACCAGCCCTCCACG-CAGGCCCCGTGCACGTGCGCAGCCCAGCCGGCAAGGCCATCAGACCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 253791 195 - 81552678 CCCGGCCCCTTTCTGACCCACAGCCTGGGATCCAGCCTGGACTACCTGGAACACATACACAGCCCCCCCGGAACCCCAGCCCCACCACCAACATGCCCCACGAGCCCCTTCCCCACATCTGCTCCCACCCCAGACCAGCCCTCCACG-CAGGCCCCGTGCACACGCGCAGCCTGGCCGGTAAGGCCATCAGACCCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 170776 181 + 80997621 CCCGGCCCCTTTCTAACCCACGGCCTGGGATCCAGCCTGGACTCACTGGA--ACATACACAGCCTCCCTGGACCCCCAGCCCCACCACCACCATGCCCCACGAGCCCCTTCCCCACATCTGCTCCCACCGCAGACCA-GCCTCCACG-CAGGCCCCGTGCCCACGTGCa-cctggccggtaaggcc---------- i macFas5.chr16 C 0 I 9 s papAnu2.chr16 165105 182 + 74645514 cctggcccctttCTAACCCACGGCCTGGGATCCAGCCTGGACTCACTGGA--AAATACACAGCCTCCCTGGacccccagccccaccaccaccacgccccacgagccccttccccacatctgctcccaccgcagacca-ccctccacG-CAGGCCCCGTGCCCACGCGCAGCCTGGCCGGTAAGGCC---------- i papAnu2.chr16 C 0 I 9 s chlSab2.chr16 155041 181 + 75148670 CCCGGCCCCTTTCTAACCCACGGCCTGGGATCCAGCCCGGACTCACTGGA--ACATACACAGCCTCCCTGGACCCCCAGCCCCACCACCACCATGCCCCACGAGCCCCTTCCCCACATCTGCTCCCACCGCAGACCA-CCCTCCACA-CAGGCCCCGTGCCCACGCGCA-CCTGGCCGGTAAGGCC---------- i chlSab2.chr16 C 0 I 9 s calJac3.chrUn_GL286409 970546 179 - 1291538 CCCAGCCCCTTTCTGACCCATGGCCTGGGAGCCAGCCTGGACCACCTGGTACACATACACAGCTCCCCTGGACCCCCAGCCCCACTACCAACATGCCCT-CAAG-CCCTTCCCCATGTCGGCTCCCACGCCAGACCAGCCCTCCATG-CAGTCCCTGTGCACACGCCCCGCCTGGCTGGTGA-------------- i calJac3.chrUn_GL286409 C 0 I 14 s canFam3.chr9 15721277 133 - 61074082 CTCAGTCCCATCCGCACCC---------------------------------ACAT----------------------GCCCCA-----AACA-GTCCCACCAG-CCCCTCCCCATGCCTGCCCCTGCC-CAGCCCAGCCCAGCAGGCCAGGCCCTGAGCACAAGCATAGCACAGAGGTCAAGGCTGCCAGACCTG i canFam3.chr9 I 62 C 0 e mm10.chr11 75898545 1154 + 122082543 I e rheMac3.chr16 164905 360 + 80904711 I a score=293283.000000 s hg38.chr17_GL383563v3_alt 276059 136 + 375691 -GCCGGTAAGGCCATCAGACCCAGcactggcccgccgtgtgacctggcaagggactaacctccacctcgcctccgtttcttcacctgcaacgaggagaccgtgacctccca-ggtggttttgctaatcagctgggt----gc s panTro4.chr17 251781 114 + 82630442 -Gc----------------------actggcccgccgtgtgacctggcaagggactaacctccacctcgcctccgtttcttcacctgcaacgtggagaccgtgacctccca-ggtggttttgctaatcagctgggt----gc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 132959 118 + 73212453 -Gc----------------------actggcccgccgtgtgacccggcaagggactaacctccacctcgcctccgtgtcttctcctgcaacgtggagaccgggacCTCCCA-GGTGGTTTTGCCAATCAGGCGGGTGCGGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 253986 119 - 81552678 -Gc----------------------actggcccgccgtgggacctggcaagggactaacctccacctcgcctccatttcttcacctgcagcgtggagaccgtgacctcccagggtggctttgctgatcaggtgggTGTGGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 165265 114 + 80904711 -gc----------------------actgg-ccgccgtgtgacctggcgagggactaacccccgcctcgcctccatttcttcacccgcaacgtggagaccgtgacctcgcagggtGGCCTTGCTCCTCAGGTGGGT----GC i rheMac3.chr16 I 360 I 16 s macFas5.chr16 170966 115 + 80997621 -gc----------------------actggcccgccatgtgacctggcgagggactaacccccgcctcgcctccatttcttcacctgcaacgtggagaccgtgacctcgcagggtGGCCTTGCTCCTCAGGTGGGT----GC i macFas5.chr16 I 9 I 4 s papAnu2.chr16 165296 114 + 74645514 -GC----------------------ACTGG-CCGCCGTGTGACCTGGCAAGGGACTAACCCCCGCCTCGCCTCCATTTCTTCACCTGCAACGTGGAGACCGTGACCTCGCAGGGTGGCCTTGCTCCTCAGGTGGGT----GC i papAnu2.chr16 I 9 I 4 s chlSab2.chr16 155231 115 + 75148670 -GC----------------------ACCAGCCCGCCGTGTGACCTGGCGAGGGACTAACCCCCGCCTCGCCTCCATTGCTTCACCTGCAACGTGGAGACCGTGACCTCGCAGGGTGGTCTTCCTCCTCAGGTGGGT----GC i chlSab2.chr16 I 9 I 4 s calJac3.chrUn_GL286409 970739 95 - 1291538 -GC----------------------ACTGG-CCGCCATGTGA-----------------CTCCACTTGGCCTCCATCTCTTCACCCACAACGCACTGACCAGGACCTC-CA-GGTGGCTTTGCTAATGAGGCAGGT----GC i calJac3.chrUn_GL286409 I 14 I 4 s canFam3.chr9 15721410 91 - 61074082 gcc----------------------actga-ccctcgtgtggccagatgagggattaactcccac---acacctgtttcttcacctgcaaagtagggatcatgacctcccagggtgg------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I a score=17990.000000 s hg38.chr17_GL383563v3_alt 276195 13 + 375691 ttggtacccctag s panTro4.chr17 251895 13 + 82630442 ttggtacccctag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 133077 13 + 73212453 TTGGTACCCCTAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 254105 13 - 81552678 TTGGTACCCCTAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 171085 12 + 80997621 CTGGGGCCTCTA- i macFas5.chr16 I 4 C 0 s papAnu2.chr16 165414 12 + 74645514 CTGGTGCCTCTA- i papAnu2.chr16 I 4 C 0 s chlSab2.chr16 155350 12 + 75148670 CTGGTGCCTCTA- i chlSab2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 970838 13 - 1291538 TTGGCACCTCTAG i calJac3.chrUn_GL286409 I 4 C 0 s canFam3.chr9 15721501 10 - 61074082 ctgGTAATTC--- i canFam3.chr9 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e rheMac3.chr16 165379 16 + 80904711 I a score=1467364.000000 s hg38.chr17_GL383563v3_alt 276208 548 + 375691 agtgagctctccaccgc-tggcagctt-t-atcgtGGCTAACTC----CTGTCTTCAGAGTCTCCATCTTGGCTGCTCCTGCCTTAATTCAGGCCTTCATTATGGCGAATTGGATAATT-AGTATCCA---------CGAATCC----------------------TCTGCATCTGGACTTAACCTCCCCACGGGCCCATGAGACTGTCGTTTCCCTGCTTAGT-CCCTTGGATGGCTCTGCTGCCTACAGGA-----------CACAAGCCCAGCCCCTGCGCCCGGCACACAGAGTCCTCCCGATCCTCACGTctctctcct----tccctccctccccacctgcttcttacccctcagggcctcttttcctcccccctctgacctcctcttcttcccttttcctctcttcctctccttctcATGCCCCAGCATAACCAGACTCCCAGCTGCGCCCGATGCCC-------------------------------------CCACACTTCCTGGGCACACTGCCTCTGCCGAGCTGTGCCTGCTCCTGAAGTGCCCTCTCCTGGCACCTGGTCACCCACCCT------CCAGGCCCGGCTGCCACATCTGCTCCACTCTGCAGCCCGGGGGCCTCCCCCACCTCC s panTro4.chr17 251908 547 + 82630442 agtgagctctccaccgc-tggcagctt-t-atcgtGGCTAACTC----CTGTCTTCAGAGTCTCCATCTTGGCTGCTCCTGCCTTAATTCAGGCCTTCATTACGGCGAATTGGATAATT-AGTATCCA---------CGAATCC----------------------TCTGCATCTGGACTTAACCTCCCCACGGGCCCATGAGACTGTCGTTTCCCTGCTTAGT-CCCTTCGATGGCTCTGCTGCCTACAGGA-----------CACAAGCCCAGCCCCTGCGCCCGGCACACAGAGTCCTCCCGATCCTCACGtctctctgct----tccctccctccccatctgcttcttacccctcacggcctcttttcct-ccccctctggactcctcttcttcccttttcctctcttcctctccttctcACGCCCCAGCATAACCAGACTCCCAGCTGCGCCCGATGCCC-------------------------------------CCACACTTCCTGGGCACCCTGCCTCTGCCGAGCTGTGCCTGCTCCTGAACTGCCCTCCCCTGGCACCTGGTCACCCACCCT------CCAGGCCCGGCTGCCACATCTGCTCCACTCTGCAGCCCGGGGGCCTCCCCCACCTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 133090 529 + 73212453 AGTGAGCTCTCCACCGC-CGGCAGCTT-T-AGCGTGGCTAACTC----CTGTCTTCAGAATCTCCATCTTGGCTGCTCCTGCCTTAATTCAGGCCTTCATTACGGCGAATTGGATAATT-AGTATCCA---------CGAATCC----------------------TCTGCATCTGGACTTAACCTCCCCACGGGCCCACGAGACTGTCATGTCCCTGCTTAGTGCCCTTCAATGGTTCTGCTGCCCACAGGA-----------CACAAGCCCAGCTCCTGTGCCCGGCACACAGAGCCCTCCCGATCCTCACGTCTCTCTCCT----TCTCTCCGTCCCCATCTGCTTCTTACCCCTCAAAGcctcttttcctctcccctctgccctcctcttcttccc-tttcctctcttcctctc---ctcACGCCCCAGCATAACCAGACTCCCAGCTGCGCCCGATG-CC-------------------------------------CCACACTTCCTGGGCACCCTGCCTCTGCCAAGCTG---------------TGCCCTCTCCTGGCACCTGGTCACCCACCCT------CCAGGACCGGCTGCCACATCTGCTCCACTCTGCAGCCCAGGGGCCTCCCCCACCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 254118 548 - 81552678 AGTGAGCTCTCCACCGCTTGGCAGCTT-T-ATCGTGGCTAACTC----CCGTCTTCAAAGCCTCCATCTTGGCTGCTCCTGCCTTAATTCAGGCCTTCGTTATGGCGAATTGGATAATT-AGTATCCA---------TGAATTC----------------------TCTACATCTGGAGTTAACCTCCCCACGGGCCCGTGAGACTGTCATTTCCCCGCTTAGCGCCCTCCGATGGCTCTGCTGCCCACAGGA------------ACAAGCCCAGCCACTGCGCCCGGCACACAGAGccctcccgaccctcacgtctctctcct----tccctccctcccCATCTGCTTCTTACCCCTCACGGCCTCTTTTCCTGTTCCCTCTGCCCtcctcttcttcccttttcctctcttcttctccttctCACGCCCCAGCATAACCAGACTCCCAGCTGTGCCCGACGCCC-------------------------------------CCACACTTCCTGGGCAC-CTGCCTCTGCAGACCTGTGTCTGCTCCTGAAGTGCCCTCTCCTGGCACCTGGTCACCCACCCT------CCAGGCCCGGCTGCCACATCCACTCCACTCTGCAGCCCGGGGGCCTCCCCCACCTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 165395 542 + 80904711 AGTGAGCTCTCCACGGC-TGGCAGCTT-T-GCCATTGCTAACTC----CTGTCCTCAGAGTCTCCATCTCGGCCGCTCCTGCCTT-ATTCAGGCCCTCATTATGGCAAACTGGATAATTCAATATCCA---------CGAATTC----------------------TCTGCCTCTGGACTTAACCGCCCCCCAGGCCC-CGAGAC--TCACTTCCCTGCTCAGTGCCCTTCGATGGCTCTGCTGCCCACAGGA-----------CACAAGCCCAGGCCCTGCGCCCGGCACACAGAGCCCTCCCGATCCTCACGTccctctcct----tccctccctccccatccgcttcttacccctcacggcctcttttcctctcccctctgccatcctcctcttcccttttcctcccttcctctccttctcactctccAGCATAACCAGACCCCCAGCTGCGCCCAGCGCCC-------------------------------------CCACACTTCCTCGGCACCCT-CCCCTGCAGAGCTGTGCCTGCTCCGGAAGTGCCCTTTCCTGGCACCTGGTCACCC--CCT------CCAGGCCCGGCTGCCACATC-GCTCCACCCGGCAGCCTGGGGTCCTCCCCCACCTCC i rheMac3.chr16 I 16 C 0 s macFas5.chr16 171097 544 + 80997621 AGTGAGCTCTCCATGGC-TGGCAGCTT-T-GCCATTGCTAACTC----CTGTCCTCAGAGTCTCCATCTCGGCCGCTCCTGCCTT-ATTCAGGCCCTCATTATGGCGAACTGGATAATTCAATATCCA---------CGAATTC----------------------TCTGCCTCTGGACTTAACCTCCCCCCAGGCCC-CGAGACTGTCACGTCCTTGCTCAGTGCCCTTCGATGGCTCTGCTGCCCACAGGA-----------CACAAGCCCAGCCCCTGCGCCCGGCACACAGAGCCCTCCCGATCCTCACGTCCCTCTCCT----TCCCTCCCTCCCCATCCGCTTCTTACCCCTCACGGCCTCTTTTCCTCTCCCCTCTGCCATCCTCCTCTTCCCTTTTCCTCCCTTCCTCTCCTTCTCACTCTCCAGCATAACCAGAGCCCCAGCTGCGCCCAGCGCCC-------------------------------------CCACACTTCCTCGGCACCCT-GCCCTGCAGAGCTGTGCCTGCTCCGGAAGTGCCCTTTCCTGGCACCTGGTCACCC--CCT------CCAGGCCCAGCTGCCACATC-GCTCCACCCGGTAGCCTGGGGTCCTCCCCCACCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 165426 549 + 74645514 AGTGAGCTCTCCACGGC-TGGCAGCTT-T-GCCATTGCTAACTC----CTGTCTTCAGAGTCTCCATCTCGGCCGCTCCTGCCTTAATTCAGGCCCTCATTATGGCGAACTGGATAATTCAATATCCA---------CGAATCC----------------------TCTGCCTCTGGACTTAACCTCCCCCCAGGCCC-CGAGAC--TCACTTCCCTGCTCAGTGCCCTTCGATGGCTCTGCTGCCCACAGGA-----------CACAAGCCCAGCCCCTGCGCCCGGCACACAGAGccctcccgatcctcacgtctctctccttccctccctccctccccatccgcttcttacccctcacggcctcttttcctctcccctctgccatcctcctcttcccttttcctcccttcctctccttctcactctccGGCATAACCAGACCCCCAGCTGCGCCCAGTGCCC-------------------------------------CCACACTTCCTCGGCACCCTGCCCCTGCAGAGCTGTGCCTGCTCCGGAAGTGCCCTTTCCTGGCACCTGGTCACCCG-CCT------CCAGGCTCAGCTGCCACATC-GCTCTACCCGGCAGCCTGGggtcctcccccacctcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 155362 519 + 75148670 AGTGAGCTCTCCACGGC-TGGCAGCTT-T-GCCATTGCTAACTC----CTGTCTTCAGAGTCTCCATCTTGGCCGCTCCTGCCTTAATTCAGGCCCTCGTTATGGCGAACTGGATAATTCAATATCCA---------CGAATTC----------------------TCTGCCTCTGGACTTAACCTCCCCCCAGGCCC-TGAGACTGTCACGTCCCTGCTCAGTGCCCTTCGGTGGCTCTGCTGCCCACAGGA-----------CACAAGCCCAGCCCCTGCGCCCGGCACACAGA--------------------------------GCCCTCCCTCCCCATCCGCTTCTTACCCCTCACGGCCTCTTTTCCTCTCCCCTCTGCCATCCTCCTCTTCCTTTTTCCTCCCTTCCTCTCCTTCTCACACTCCGGCATAACCAGAGCCCCAGCCGCGCCCAGTGCCC-------------------------------------CCACACTTCCCTGGCACCTTGCCCCTGCAGAGCTGTGCCTGCTCCTGAAGTGCCCTTTCCTGGCACCTGGTCACCCG-CCT------CCAGGCCCGGCTGCCACATT-GCTCCACCTGGCAGCCTAGGGTCCTCCCCCACCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 970851 589 - 1291538 AGTGAGCTCTCCATCGC-CGGCTGCTTCT-GTCACGGCTAACTC----TTGTCTTC--AGTCTCCATCCTGGCTGCTCCTGCCTTAACTCAGGCCCTCACTACAGCGAATTGG---ATTCAGTATCCA---------CGGAGTCTCTG--------------CAAATCTGCATCTAGATGTACCCTCCCCACAGGCCCATGTGACTGGCTTTTCCCTGCCTAGCACCCTTCGATGGGTCTGACGCCTGTAAGTTCTCCACCTGCCACAGAGCAAGCCCCG--GCCTGCCACCCAGAGCCCTACTGAtcctcctgtctctctcct-------------ccccacctgcttctttcccctcactggctcttttcctctccccaccgccctcttcttcttcccttttcctccctccctctccttctcactcccTGGCATAACCAGACCCTCAGCTACACCAAACGCCCCCATACTTACTTGGCACCACACTTGCGCTCCGCTGCACCACATTTCCCCGGCACCCT-CCTCTGCAGAGCTGCGGCTGCTCCTGAAGTGCCCTCTTCGGGAACCTGGTCACCCATCCT------CCCGGCCC-GCTGCAACACCCACCCCCCTCTGCAGCCCAGAGGCCTCCCCCACCTCC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15721511 477 - 61074082 AGTGGGCTCTCAATCCC-TGACAGCTT-TCGTTATTTATAACTCATAACTGTCTTTTGAGTCTCCATCCTG---GTTCCTCTCTGAATTCAGACCCTCATTATTGCTACTTGGATAATTCAGCATCCAACAGGCTCTCCAACCCACTAAGCATACCCTCCTCCAAATGTGCCTCTGGATGGAACCTCTGCAAAGACCCACCTGTTTGTCA--TCCCTGTTTAACACTCTTTGATGGCTTTGCTGCCTACAGGA-------TCCTCAGCAGCCCCGCCCCC---------------------------------------TTCCT----TCCCTCC--TCCAGCCTGCCTCTTACCCCTC-----------------------------------------------------CCTCCCCTGCTGACTCTCCCACACCCTCAA----CCACCAGCAACCAGTG--C-------------------------------------CAGCACTTCCAC-TCACCCTGCTTCTACACAGCTATGT---CTCCTGAAATGCCCTCCTCTGGCGCCTTGGTGCCCACCCTCCTGGGCCTGGCCCGGCTGAGA-ACCAGCTATACTCTGCAGCC---------CTCCCACTTCC i canFam3.chr9 C 0 I 71 e mm10.chr11 75898545 1154 + 122082543 I a score=69900.000000 s hg38.chr17_GL383563v3_alt 276756 26 + 375691 CCAGGTGCCGCAGCTCACCCATGGCA s panTro4.chr17 252455 22 + 82630442 CCAGGTGCCGCAGCTCACCCAT---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 133619 26 + 73212453 CCAGGTGCCACAGCTCACCCACGGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 254666 26 - 81552678 CCAGGTGCCGCAGCTCACCCACGGCA i nomLeu3.chr19 C 0 I 112 s rheMac3.chr16 165937 26 + 80904711 CCAGGTGCCACAGCTCGCCCATGGCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171641 26 + 80997621 CCAGGTGCCACAGCTCGCCCATGGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 165975 26 + 74645514 ccaggtGCCACAGCTCGCCCATGGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 155881 26 + 75148670 CCAGGTGCCACAGCTCGCCCACGGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 971440 26 - 1291538 CTGGGTGCCACCATTTGCCCATGGCA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I a score=12831.000000 s hg38.chr17_GL383563v3_alt 276782 5 + 375691 GGTCC s ponAbe2.chr17 133645 5 + 73212453 GGTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 254804 5 - 81552678 GGTCC i nomLeu3.chr19 I 112 C 0 s rheMac3.chr16 165963 5 + 80904711 GGTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171667 5 + 80997621 GGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166001 5 + 74645514 GGTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 155907 5 + 75148670 GGTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 971466 5 - 1291538 GGTCC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e panTro4.chr17 252477 0 + 82630442 C a score=20110.000000 s hg38.chr17_GL383563v3_alt 276787 12 + 375691 TCCCCACGGCAG s panTro4.chr17 252477 5 + 82630442 -------GGCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 133650 12 + 73212453 TCCCCGTGGCAG i ponAbe2.chr17 C 0 I 7 s nomLeu3.chr19 254809 12 - 81552678 TCCCCACGGCAG i nomLeu3.chr19 C 0 I 16 s rheMac3.chr16 165968 12 + 80904711 GCCCCACGGCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171672 12 + 80997621 GCCCCGCGGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166006 12 + 74645514 TCCCCGCGGCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 155912 12 + 75148670 GCCCCACAGCAA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C a score=37177.000000 s hg38.chr17_GL383563v3_alt 276799 43 + 375691 GCCCAT-CCCATGGCAGGCCTGTCCCACAGCAGATCCTCCCCAT s panTro4.chr17 252482 43 + 82630442 GCCCAT-CCCATGGCAGATCCTCCCCACGGCAGATCCTCCCCAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 254837 44 - 81552678 GTCCATCCCCACGGCAGGTCCTCCCCACGGCAGGTCCTCCCCAC i nomLeu3.chr19 I 16 C 0 s rheMac3.chr16 165980 22 + 80904711 GTCCTC-CCCACAACAAGCCCGT--------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171684 43 + 80997621 GTCCTC-CCCACAGCAAGCCCGTCCCAGGGCAGGTCCTCCCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166018 43 + 74645514 GTCCTC-CCCACAGCAAGCTCGTCCAGCAGCAGGTCTGTCCCAT i papAnu2.chr16 C 0 T 69 s chlSab2.chr16 155924 43 + 75148670 GTCCGT-CCAGCGGCAGGTCCGCCCCAGGGCAGGTCTTCCCCAT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e ponAbe2.chr17 133662 7 + 73212453 I a score=18399.000000 s hg38.chr17_GL383563v3_alt 276842 27 + 375691 GGCAGGTCC-TCCCCATGGCAGGCCCAT s panTro4.chr17 252525 27 + 82630442 GGCAGATCC-TCCCCACGGCAGGTCCAT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 254881 28 - 81552678 GGCAGGTCCATCCCCATGGCGGGTCCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166002 16 + 80904711 ------------CCCAGGGCAGGTCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171727 27 + 80997621 GGCAGGTCC-TCCCCATAGCAAGCTCGT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 155967 27 + 75148670 GGCAGGTCC-TCCCCACAGCAAGCCTGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e papAnu2.chr16 166061 69 + 74645514 T e ponAbe2.chr17 133662 7 + 73212453 I a score=100515.000000 s hg38.chr17_GL383563v3_alt 276869 80 + 375691 CCCACGGCAGATCCTCCCCGCGGCAGGTCCTCCCCACGGCAGGTCC-ATCCCACGGCAGGTCCATCCCGCGGCAGGTCC----------------------------------AT s panTro4.chr17 252552 80 + 82630442 CCCACGGCAGGTCCTCCCCACGGCAGGTCCTCCCCACGGCAGGTCC-TCCCCACGGCAGGTCCTCCCCACGGCAGATCC----------------------------------TC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 254909 115 - 81552678 CCCACGGCGGGTCCTCCCCACGGCGGGTCCTCCCCACGGCGGGTCCATCCCCACGGCGGGTCCTCCCCACGGCGGGTCCTCCCCACGGCAGGTCCATCCCCACGGCAAGTCCATC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166018 80 + 80904711 CCCGCGGCAGGTCCTCCCCATAGCAAGCTCATCCAGCAGCAGGTCC-GTCCCACAGCAAGCCCGTCCCAGGGCAGATCC----------------------------------TC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171754 80 + 80997621 CCAGCAGCAGGTCCATCCCACAGCAGGTCCTCCCCGCGGCAGGTCC-TCCCCACAGCAAGCCCGTCCCACGGCAGGTCC----------------------------------TC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 165992 80 + 74645514 CCCATGGCAGGTCCTCCCCGCGGCAGGTCCTCCCCACAGCAAGCTC-GTCCAGCAGCAGGTCTGTCCCATGGCAGGTTC----------------------------------TC i papAnu2.chr16 T 69 T 80 s chlSab2.chr16 155994 80 + 75148670 CCAGCGGCAGGTCCATCCCACGGCAGGTCCTCCCCCCGGCAGGTCC-TCCCCACGGCAGGTCCACCCCAGGGCAGGTCC----------------------------------AT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e ponAbe2.chr17 133662 7 + 73212453 I a score=57451.000000 s hg38.chr17_GL383563v3_alt 276949 39 + 375691 CCCACGGCAGGTCCTCCCCACGGCAGGTCCTCCCCGCGG s panTro4.chr17 252632 39 + 82630442 CCCACGGCGGGTCCATCCCACGGCGGGTCCATCCCACGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 255024 39 - 81552678 CCCACGGCGGGTCCTCCCCACGGCGGGTCCTCCCCACGG i nomLeu3.chr19 C 0 I 486 s rheMac3.chr16 166098 29 + 80904711 CCCACGGCAGGTTCTCCCCGCGGCAGGTC---------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171834 39 + 80997621 CCCACGGCAGGTCCTCCCCACGGCAGGTCCGCCCCATGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 165992 39 + 74645514 CCCATGGCAGGTCCTCCCCGCGGCAGGTCCTCCCCACAG i papAnu2.chr16 T 80 C 0 s chlSab2.chr16 156074 39 + 75148670 CCCACGGCAGGTCCTCCCCCCGGCAGGTCCTCCCCACGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e ponAbe2.chr17 133662 7 + 73212453 I a score=3322.000000 s hg38.chr17_GL383563v3_alt 276988 9 + 375691 CAGGTCCAT s panTro4.chr17 252671 9 + 82630442 CGGGTCCAT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 166127 3 + 80904711 ------CTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171873 9 + 80997621 CAGGTTCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166031 9 + 74645514 CAAGCTCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156113 9 + 75148670 CAAGCCCAT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e nomLeu3.chr19 255063 486 - 81552678 I e ponAbe2.chr17 133662 7 + 73212453 I a score=39960.000000 s hg38.chr17_GL383563v3_alt 276997 31 + 375691 CCTACGGCAGGTCCATCCCACGGCAGGTCCA s panTro4.chr17 252680 31 + 82630442 CCCACGGCGGGTCCATCCCACGGCGGGTCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 255549 31 - 81552678 CCCACAGCGGGTCCTCCCCACGGCGGGTCCT i nomLeu3.chr19 I 486 C 0 s rheMac3.chr16 166130 31 + 80904711 CCCGTGGCAGGTCCGCCCCATAGCAAGCTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171882 31 + 80997621 CCCACGGCAGGTCCGCCCCATGGCAGGTCCG i macFas5.chr16 C 0 T 57 s papAnu2.chr16 166040 31 + 74645514 CCAGCAGCAGGTCTGTCCCATGGCAGGTTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156122 31 + 75148670 CCGTCGGCAGGTCCTCCCCACGGCAAGCCCA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e ponAbe2.chr17 133662 7 + 73212453 I a score=4973.000000 s hg38.chr17_GL383563v3_alt 277028 7 + 375691 TCCCGCG s panTro4.chr17 252711 7 + 82630442 TCCCACG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 255580 7 - 81552678 CCCCACG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166161 7 + 80904711 TCCAGCA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 166071 7 + 74645514 CCCCGCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156153 7 + 75148670 TCCGTCG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e macFas5.chr16 171913 57 + 80997621 T e ponAbe2.chr17 133662 7 + 73212453 I a score=26363.000000 s hg38.chr17_GL383563v3_alt 277035 16 + 375691 GCAGGTCCTCCCCACG s panTro4.chr17 252718 16 + 82630442 GCGGGTCCTCCCCACG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 255587 16 - 81552678 GCGGGTCCTCCCCACG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166168 16 + 80904711 GCAGGTCCGCCCCATG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171856 16 + 80997621 GCAGGTCCGCCCCATG i macFas5.chr16 T 57 C 0 s papAnu2.chr16 166078 16 + 74645514 GCAGGTCTGCCCCACG i papAnu2.chr16 C 0 T 33 s chlSab2.chr16 156160 16 + 75148670 GCAGGTCCTCCCCGCG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e ponAbe2.chr17 133662 7 + 73212453 I a score=11529.000000 s hg38.chr17_GL383563v3_alt 277051 15 + 375691 GCAGATCCTCCCCAC s panTro4.chr17 252734 15 + 82630442 GCGGGTCCTCCCCAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 255603 15 - 81552678 GCAGATCCTCCCCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166184 15 + 80904711 GCAGGTTCTCCCCGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171872 15 + 80997621 GCAGGTTCTCCCCAC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 156176 8 + 75148670 GCAGACCC------- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e papAnu2.chr16 166094 33 + 74645514 T e ponAbe2.chr17 133662 7 + 73212453 I a score=9810.000000 s hg38.chr17_GL383563v3_alt 277066 8 + 375691 GGCAGGTC s panTro4.chr17 252749 8 + 82630442 GGCGGGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 255618 8 - 81552678 GGCAGATC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166199 8 + 80904711 GGCAGGTC i rheMac3.chr16 C 0 I 197 s macFas5.chr16 171887 8 + 80997621 GGCAGGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166061 8 + 74645514 GGCAGGTT i papAnu2.chr16 T 33 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e chlSab2.chr16 156184 0 + 75148670 C e ponAbe2.chr17 133662 7 + 73212453 I a score=1500.000000 s hg38.chr17_GL383563v3_alt 277074 1 + 375691 C s panTro4.chr17 252757 1 + 82630442 C i panTro4.chr17 C 0 M 1229 s nomLeu3.chr19 255626 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166404 1 + 80904711 C i rheMac3.chr16 I 197 C 0 s macFas5.chr16 171895 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166069 1 + 74645514 C i papAnu2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e chlSab2.chr16 156184 0 + 75148670 C e ponAbe2.chr17 133662 7 + 73212453 I a score=90.000000 s hg38.chr17_GL383563v3_alt 277075 1 + 375691 T s nomLeu3.chr19 255627 1 - 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166405 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171896 1 + 80997621 G i macFas5.chr16 C 0 I 16 s papAnu2.chr16 166070 1 + 74645514 T i papAnu2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e chlSab2.chr16 156184 0 + 75148670 C e ponAbe2.chr17 133662 7 + 73212453 I e panTro4.chr17 252758 1229 + 82630442 M a score=4187.000000 s hg38.chr17_GL383563v3_alt 277076 5 + 375691 CCCCA s nomLeu3.chr19 255628 5 - 81552678 CCCCA i nomLeu3.chr19 C 0 I 114 s rheMac3.chr16 166406 5 + 80904711 CCCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171913 5 + 80997621 CCCCA i macFas5.chr16 I 16 C 0 s papAnu2.chr16 166071 5 + 74645514 CCCCG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e chlSab2.chr16 156184 0 + 75148670 C e ponAbe2.chr17 133662 7 + 73212453 I e panTro4.chr17 252758 1229 + 82630442 M a score=476.000000 s hg38.chr17_GL383563v3_alt 277081 1 + 375691 C s nomLeu3.chr19 255747 1 - 81552678 C i nomLeu3.chr19 I 114 C 0 s rheMac3.chr16 166411 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171918 1 + 80997621 T i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166076 1 + 74645514 C i papAnu2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e chlSab2.chr16 156184 0 + 75148670 C e ponAbe2.chr17 133662 7 + 73212453 I e panTro4.chr17 252758 1229 + 82630442 M a score=11116.000000 s hg38.chr17_GL383563v3_alt 277082 9 + 375691 AGCAGGTCT s ponAbe2.chr17 133669 9 + 73212453 AGCAGGTCC i ponAbe2.chr17 I 7 C 0 s nomLeu3.chr19 255748 9 - 81552678 GGCAGGTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166412 9 + 80904711 GGCAGGTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171919 9 + 80997621 GGCAGGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166077 9 + 74645514 GGCAGGTCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e calJac3.chrUn_GL286409 971471 0 - 1291538 C e chlSab2.chr16 156184 0 + 75148670 C e panTro4.chr17 252758 1229 + 82630442 M a score=253961.000000 s hg38.chr17_GL383563v3_alt 277091 118 + 375691 GCCCCACGCTCATCCCTGCCTTCTACTTCTACAGCACTCCTCACACTGCACTGCAATAGCTGAcaccaactatgagctcctggagggcaggggctggcatctctacctcctcagcccc s ponAbe2.chr17 133678 117 + 73212453 GCCCCACACTCATCCCTGACTTCTACTTCTACAGCACTTCTCACACTGCACTGCAATAGCTGACACCAACTATGAGCTCCTGGAGGGCAGGGGCCG-CATCTCCACCTCCTCAGCCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 255757 118 - 81552678 GCCCCGCGCTCATCCCTGCCTTCTACTTCTACAGCACTTCTCACACTGCACTGCACTAGCTGAcaccaactatgagctcctggagggcaggggccggcatctccacctcctcaggcct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166421 115 + 80904711 GCCCCGCGCTCATCCCTGCCTTCTACTTCTGCAGCACTTCT--CACTGCACTGCCATATCTGACGCCAACCATGAGCTCCTGGAGGGC-GGGGCTGGCATCTCCACCTCCTCAGCCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 171928 115 + 80997621 GCCCCGCGCTCATCCCTGCCTTCTACTTCTGCAGCACTTCT--CACTGCACTGCCATATCTGACACCAACCATGAGCTCCTGGAGGGC-GGAGCTGGCATCTCCACCTCCTCAGCCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166086 115 + 74645514 GCCCCACGCTCATCCCTGCCTTCTACTTCTGCAGCACTTCT--CACTGCACTGCAATATCTGACACCAACCATGAGCTCCTGGAGGGC-GGGGCTGGCATCTCCACCTCCTCAGCCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156184 115 + 75148670 GCCCCGCGCTCATCCCTGCCTTCTACTTCTGCAGCACTTCT--CACTGCACTGCCATATCTGACACCAACCATGAGCTCCTGGAGGGC-AGGGCCGGCATCTCCACCTCCTCAGCCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 971471 117 - 1291538 GCCCCATGCTCCTGCCTGCCTTCTACTCCTACAGCACTTCTCACGCTGCACTGCCATATCTGACACCAACTGTGAGCTCCTGGAGGGCAGAGGCTGGC-TCTCCGCCTCCTAGGCCTT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75898545 1154 + 122082543 I e canFam3.chr9 15721988 71 - 61074082 I e panTro4.chr17 252758 1229 + 82630442 M a score=463856.000000 s hg38.chr17_GL383563v3_alt 277209 192 + 375691 ggggcctggcacgaagGTGAGCTGAGTG-------CACACAGGAACTGAC-CAGGGGACAGGTCATGCAAAGCTCCGTCC---------AGAAAGCTCTGGGCCTTG---CCAGGGATCCGTGTGGTTCCCCAAGCCCACCCTGGGTCTCTGCAGCCGATTGGCTGCCTTTGTGCTGATGACCCTGAGCTGAAGGTCAGCAGTGTGC----------TGGGG s ponAbe2.chr17 133795 192 + 73212453 GGGGCCTGGCACGAAGGTAAGCTGAATG-------CACACAGGAAATGAC-CAGGGGACAGGTCACACAAAGCTCTGTCC---------AGAAAGCTCTGGGCCTTG---CCAGGGATCCGTGTGGTTCCCCAAGCCCACCCTGGGTCTCTGCAGCCCCTTGGCTGCCTTTGTGCTAATGACCCTGAGCTGAAGGTCAGCAGTGTGC----------TGGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 255875 192 - 81552678 ggggcctggcacgaagGTGAGCTGAGTG-------CACACAGGAACTGAC-CAGGGGACAGGTCACGCGAAGCTCCGTCC---------AGAAAGCTCCGGGCCTTG---CCAGGGATCCGTGTGGTGCCCCAAGCCCACCCTGGGTCCCTGCAGCCCCTTGGCTGCCTTTGTGCTGAAGACCCCGAGCTGAAGGTCAGCAGTGTGC----------CGGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166536 192 + 80904711 GCGGCCTGGCACGAAGGTGAGCTGAGTG-------CGCACAGGAACTGAC-CAGGCGACAGGTCACGCAAAGCTCCGTCC---------AGAAAGCTCTGGGCCTCG---CCAGGGATCCGTGTGGTTGCCCAGGCCCACCCTGGGTCCCTGCAGCCCCTTGGCTGCCTCCCTGCTGATGACCCTGGGCTGAAGGTCGGCAGTGTGC----------TGGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 172043 192 + 80997621 GCGGCCTGGCACGAAGGTGAGCTGAGTG-------CGCACAGGAACTGAC-CAGGCGACAGGTCACGCAAAGCTCCGTCC---------AGAAAGCTCTTGGCCTCG---CCAGGGATCCGTGTGGTTGCCCAGGCCCACCCTGGGTCCCCGCAGCCCCTTGGCTGCCTCCCTGCTGATGACCCTGGGCTGAAGGTCGGCAGTGTGC----------TGGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166201 192 + 74645514 GCGGCCTGGCACGAAGGTGAGCTGAGTG-------CACATAGGAACTGAC-CAAGCGACAGGTCACGCAAAGCTCCATCC---------AGAAAGCTCTGGGCCTCG---CCAGGGATCCGTGTGGTTGCCCAGGCCCGCCCTGGGTCTCTGCAGCCCCTTGGCTGCCTCCATGCTGATGACCCTGGGCTGAAGGTCGGCAGTGTGC----------TGGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156299 192 + 75148670 GTGGCCTGGCACGAAGGTGAGCTGAGTG-------CGCACAGGAACCGAC-CGGGGGACAAGTCACGCAAAGCTCCGTCC---------AGAAAGCTCTGGGCCTCG---CCAGGGACCCGTGTGGTTGCCCAGGCCCCCCCTGGGTCCCCGCAGCCCCTTGGCTGCCTCCGTGTTGATGACCCTGAGCTGAAGGTCGGCAGTGTGC----------TGGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 971588 200 - 1291538 GGGGCCTGGCGTGAAGGTGA-CTGAGTG-------CACACAGGAACTGG--CGTGGGACACATCACACAAAGTTCCATCC---------AGAAAGCTCTGGGCCTTG---CCAGGGATCCGAGCAGTTCCCCAAGCCCACCCTGGGTCCCTGCAGCCCCCTGGCTGCCTTTGTGCTGATAGCCCTAAGCTGGAGGTCAGCAGCATGCTGGTGGCATGTGGTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15722059 210 - 61074082 GGGGCTTGGCACGAAGGTGATCTAAGTGGGAGGGTCTCCAAAGGGCTGCCGGAAGTGACCCAATAGCCACAACTCTGCCCTCTCTCCCTGGGAAGCTGTAGGGCTTGACCTCTGGAGGTTGCATGGTTCCCAGAGGCCACCCTTG--CTTGGCAGCTCCTCTGGGGCCTTTGTTCTGATGACCCTGAGTTGAAGGGTAGTGGCCTGA----------CAGGG i canFam3.chr9 I 71 C 0 e mm10.chr11 75898545 1154 + 122082543 I e panTro4.chr17 252758 1229 + 82630442 M a score=97150.000000 s hg38.chr17_GL383563v3_alt 277401 34 + 375691 TGAACGGAAGGGGCTCAGCACCGCACAAGATAGC s ponAbe2.chr17 133987 34 + 73212453 TGAACGGAAGGGGCTCAGCACTGCACAAAATAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 256067 34 - 81552678 TGAACGGAAGGGGCTCAGCACTGCACAAAGTAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166728 34 + 80904711 TGAACAGCAGGGGCTCAGCACCACACAAAGTAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 172235 34 + 80997621 TGAACAGCAGGGGCTCAGCAGCGCACAAAGTAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166393 34 + 74645514 TGAACGGCAGGGGCTCAGCAGCGCACAAAGTAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156491 34 + 75148670 TGAACAGCAGGGGCTCAGCACCGCACAAAGTAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 971788 34 - 1291538 TGAGAAGAATGGGCTCAGCACTGCACAAGGCAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75899699 34 + 122082543 TGAACAGGATGGACTGGCAACTGCGTGGAGTGGC i mm10.chr11 I 1154 C 0 s canFam3.chr9 15722269 34 - 61074082 TGAACAGAATGGGCTTGGAACTGCATACAATAGC i canFam3.chr9 C 0 I 18 e panTro4.chr17 252758 1229 + 82630442 M a score=23851.000000 s hg38.chr17_GL383563v3_alt 277435 17 + 375691 TGCTCCTTCTTTCTTTG s ponAbe2.chr17 134021 17 + 73212453 TGCTCTTTCTTTCTTTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 256101 17 - 81552678 TGCTCTTTCTTTCTTTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166762 13 + 80904711 TG----TTCTTTCTTTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 172269 13 + 80997621 TG----TTCTTTCTTTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166427 13 + 74645514 TG----TTCTTTCTTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156525 13 + 75148670 TG----TTCTCTCTTTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 971822 17 - 1291538 TGCTTGCTCTCCCTTCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75899733 14 + 122082543 AG---TTTCTTTATTTG i mm10.chr11 C 0 C 0 e canFam3.chr9 15722303 18 - 61074082 I e panTro4.chr17 252758 1229 + 82630442 M a score=477468.000000 s hg38.chr17_GL383563v3_alt 277452 171 + 375691 GAAGAAGAAAAGCCA------------CAC-GCAGGCCTCAAGACAGCAAGAGAAAAGGAGGCCTCAATGGAGATGTTCCGCTTGCCAGACTCT-GAGCAAGGCAGATGTTCCAAGATGCCGTGCGGTGTCTGGTCCAATCCTCCGATCCCAGCAACTGCAGCCAAGTCCATTCCTGCCAGACAG s ponAbe2.chr17 134038 171 + 73212453 GAAGAAGAAAAGCCA------------CAC-ACAGGCCTCAAGACAGCAAGAGAAAAGGAGGCCTCAGTGGAGATGTTCCGCTCGCCAGACTCC-GAGCAAGGCAGGTGTTCCAAGATGCCGTGCGGTGTCTGGTCCAATCCTCCGATCCCAGCGACTGGAGCCAAGTCCATTCCTGCCAGACAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 256118 170 - 81552678 GAAGAAGAAAAGCCA------------CAC-GCAGGCCTCAGGACGGCAAGAGAAAAGGAGGCCTCAATAGAGATGTTCCTCTCGTCAGACTCC-GGGCAAGGCAGGTGTTCCAAGACGCCGTGCGGTGTCCGG-CCAATGCTTCAATCCCAGCAAGTGGAGCCAAGTCCATTCCTGCCAAACAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166775 168 + 80904711 GAAGAAGAAAAGCCA------------CAT-GCAGGCCTCGAGACAGCAAGAGAAA---AGGCCTCAGTGGACACGTTCCACTCGTCAGACTCC-GAGCAAGGCCGATGTTCCAAGACGCCGTGTGGTGTCTGGTCCACTCCTCCGATCCCAGCAACTGGGGCCAAGTCCATTCCTGCCGAACAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 172282 171 + 80997621 GAAGAAGAAAAGCCA------------CAC-GCAGGCCTCGAGACAGCAAGAGAAAAGGAGGCCTCAGTGGACACGTTCCACTCGTCAGACTCC-GAGCAAGGCCGATGTTCCAAGACGCCGTGTGGTGTCTGGTCCACTCCTCCGATCCCAGCAACTGGGGCCAAGTCCATTCCTGCCGAACAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166440 170 + 74645514 GAAGAAGAAAAGCCA------------CAC-GCAGGCCTCGAGACAGCGAGAGAAAAGGAGGCCTCAGTGGACACGTTCCACTCGTCAGACTCC-GAGCAAGGCCAATGTTCCAAGACGCCGTGTGGTGTCTGGTCCACTCCTCCGATCCCAGCAACTGGGG-CAAGTCCATTCCTGCCGAACAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156538 171 + 75148670 GAAGAAGAAAAGCCA------------CAC-GCAGGCCTCGAGACAGCAAGAGAAAAGGAGGCCTCAGTGGACACGTTCCACTCGTCAGACTCC-GAGCAAGGCCGATGTTCTAAGACACCGTGTAGTGTCTGGTCCACTCCTCCGATCCCAGCAACTGGGGCCAAGTCCATTCCTGCCAAACAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 971839 162 - 1291538 GAAGCAGAAAAGTCA------------TGCTGCAGACCTCCCAACAGCAAGAGAAAAGCAGGCCGTAGTGGAGATGCTCTGC-CGTCAGACTCCAGAGCAAGGCGGATGTTCCGAGAGGCAGCGTGGTGTCTGGTCCAATCCTCCGATCC----------AGCCAAGCTGGTTCCTGCCAAGCAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75899747 167 + 122082543 GGGGAAGAAAGGCTG------------TCT-GTGGG-CTCTAGGCAGCA--GGGCTCGTGTGCCTTAATGGAGATGTTCTGCTTGCCA-ACCCC-AGGCGAGGTGGATGTTCCAAGATACAGCTTGGTGTCTGGTCCAATCCTCTGATCCTAACAACAGGAGCCAAGTCAATTCCTGCCAAACAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15722321 184 - 61074082 GGGGAAGGGGAGCCACGCCACAGGCACCAC-ATGGGCACCAGAGCAGCAACAGAGATGTGTGCCCGGATGGAGATATTCTGTCCCTTAGACTCCGGAGCAAGGCAGATGTTCCAAGATGCTGTGTGGTGTCTGGTCCAATCCTCCGATCTTGGCAAGAGCAGCCAAGTCAATTCCTGCCAAGTAG i canFam3.chr9 I 18 C 0 e panTro4.chr17 252758 1229 + 82630442 M a score=1826800.000000 s hg38.chr17_GL383563v3_alt 277623 594 + 375691 CCTTGGAGATGCAAGAG-AGCCGAAGC---------AGGCCCCTCGGGGCAGAAGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CGCTGAATG--AAAAAATCCATCTTTGTAATGAGGGGCAAACACTCGTCTTCCACGTCTGAATTAGGTCAA-GAGGAGAAAGGACATTGTGAGGCCAATTTGCAGGCGACTGAGATGAA------ATGGCTCAAGGAGGCTG----------------CTGCTTCTACAGCTCCA----GCAATGGACG-GGCACTGAGGATTAGCTTTGGAAAGGGAGTAGGGGACAGG-GCCGTGGAGGACTTTCACCGCACACCCATTTGGGAGGGAGGCTCTG---------C--AAAAAACTGACTTCTCCTAAGCCTT------Atg----cttgtggggatgt-gaaatggtgcagctgccacggaaagcagggtggaggctcctcaaacaggtaaacacagaactgccgtatgattcagcaattccactgctgggtatagac-ccaagagaatcgaaggcagggtt--gcagagaggtttgcac-gctcgtgcccactgcagcattgttcacaatagctgcaacatggaagcaacccaaatgtccatc-acaggtgagtggatacacaaa s panTro4.chr17 253995 594 + 82630442 CCTTGGAGACGCAAGAG-AGCCGAAGC---------AGGCCCCTCGGGGCACAAGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CGCTGAATG--AAAAAATCCATCTTTGTAATGAGGGGCAAACACACGTCTTCCACGTCTGAATTAGGTCAA-GAGGAGAAAGGACATTGTGAGGCCAATTTGCAGGCGACTGAGATGAA------ATGGCTCAAGGAGGCTG----------------CTGCTTCTACAGCTCCA----GCGATGGACG-GGCACTGAGGATTAGCTTTGGAAAGGGAGTAGGGGACAGG-GCCGCGGAGGACTTTCACCGCACCCCCATTTGGGAGGGAGGCTCTG---------C--AAAAAACTGACTTCTCCTAAGCCTT------Atg----cttgtggggatgt-gaaatggtgcagctgccatggaaagcagggtggaggctcctcaaacaggtaaacacagaattgccgtacgattcagcaattccgctgctgggtatagac-ccaagagaatcgaaggcaaggtc--gcagagaggtttgcac-gctcgtgctcactgcagcattgttcacaatagctgcaacatggaagcaacccaaatgtccatc-acaggtgagtggatacacaaa i panTro4.chr17 M 1229 C 0 s ponAbe2.chr17 134209 592 + 73212453 CCTCGGAGATGCAAGAGCAGCCGGAGC---------AGGCCCCTCGGGGCAGAAGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CGCTGAATG--AAAAAATCCATCTTTGTAATGAGGCGCAAACACACGTCTTCCACGTCTGAATTAGGTCGA-GAGGAGAAAGGACATCGTGAGGCCAATTTGCAGGCGACTCAGATGAA------ATGGCTCAAGGAGGGTG----------------CTGCTTCTACAGCTCCA----CCGATGGACG-GGCACTGAGGATTAGCTTTGGAAAGGCAGCAGGGGACGGG-GCTGCAGAGGACTTTCGCCGCACACCCATTTGGGAGGgaggctctg---------c--aaaaaactgacttctcctaagcctt------atg----cttgtggggatgt-gaaatggtgcagctgccatggaaagcagggtggaggctcctcaaacaagtaaacacagaactgccatatgattcagcaattccacttctgggtatagac-ccaagagaatcgaaggcagggtc--gcagagaggtgtgcac-gctcgtgctcact---gcattattcacaacagctgcaacatggaagcaacccaaatatccatc-aaaggtgagtggatacacaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 256288 585 - 81552678 CCTCAGAGATGCAAGAGCAGCCGGAGT---------AGGCCCCTGGGGGCAGAAGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CGCTGAATG--AAAAAATCCATCTTTGTAATGAGGCACAAACACACATCTTCCACGTCTGAATTAGGTTGA-GAGGAGAAAGGACATCGTGAGGCCAATTTGCAGGCGACTGGGATGAA------ATGGCTCAGGGAGGCTG----------------CTGCTTCTACAGCTCCA----CTGATGGACG-GGCTCTGGGGA------CTGGAAAGGGAGCAGGGGACGGG-GCCGTGGAGGACTTTCA-CACACACCCATTTGGGAGGGAGGCTCTG---------C--AAAAAACTGACTT---CTAGGCCTT------Atg----cttgtggggatgt-gaaatggtgcagctgccacggaaagcagcgtggaggctcctcaaacaagtaaacacagaaccgccgtatgattcagcaattccactgctgggtatagac-ccaagagaatcgaaggcagggcc--gcagagaggtgtgcac-tctcatgctcactgcagcatcattcacaatagctgaaacatggaagcaactcacatgtccatc-acaggtgagtggatacacaaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 166943 594 + 80904711 CCGCGGAGATGCCGGAGATGCCGGAGCCGCGGGAGCAGGCCCCTCGGGGCAGACGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CACTGAATG--AAAAAATCCATCTTTGTAATGAGTCACAAACGCATGTCTTCCACGTGGGAATTACGTCGA-GAAGAGAAAGGACATCGTGAGGCCAATTTGCAGGCGACTCGGATGAA------ATGGCTCAAGGA-----------------------GCTTCCACAGCTCCA----CCAAAGGACG-GGCACTGAGGGTCAGGTTTGGAAAGGGAGGAGGGGACGGG-GCCACGGAGGACTTTCACCGCACACCCATCTGGGAGGCAGGCTCTG---------C--AAAACACTGACTTCTCCTAAGCCTT------Atg----cttgtggggatgt-aaaacggtgcagttgtcacggaaagcaggatggaggctcctcagacaagcaagcacagaactgccatacgacccagcgattccactgctgggcatagac-gcaagagaatcgaaggca-ggtc--gcagacaggtgcgcac-gcccatgctcactgcggcat-gttcacaacagctgaaacgtgg-agcaacccaaatgtccatc-acaggtgagtggatacacgga i rheMac3.chr16 C 0 I 23 s macFas5.chr16 172453 594 + 80997621 CCGCGGAGATGCCGGAGATGCCGGAGCCGCCGGAGCAGGCCCCTCGGGGCAGACGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CGCTGAATG--AAAAAATCCATCTTTGTAATGAGTCACAAACGCACGTCTTCCACGTCGGAATTAGGTCAA-GAGGAGAAAGGACATCGTGAGGCCAGTTTGCAGGCGACTCGGATGAA------ATGGCTCAAGGA-----------------------GCTTCCACAGCTCCA----CCAAAGGACG-GGCACTGAGGGTCAGGTTTGGAAAGGGAGGAGGGGACGGG-GCCGCGGAGGACTTTCACCGCACACCCATCTGGGAGGCAGGCTCTG---------C--AAAACACTGACTTCTCCTAAGCCTT------Atg----cttgtggggatgt-aaaacggtgcggttgccacggaaagcaggatggaggctccttagacaagcaagcacagaactgccatacgacccagcgattccactgctgggcatagac-gcaagagaatcgaaggca-ggtc--gcagacaggtgcgcac-gcccatgctcactgcggcat-gttcacaacagctgaaacatgg-agcaacccaaatgtccatc-acaggtgagtggatacacgga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 166610 594 + 74645514 CCGCGGAGATGCCGGAGATGCCGGAGCCGCCGGAGCAGGCCCCTCGGGGCAGACGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CGCTGAATG--AAAAAATCCATCTTTGTCATGAGTCACAAACGCACGTCTTCCACGTCGGAATTAGGTCAA-GAGGAGAAAGGACATCGTGAGGCCAATTTGCAGGCGACTCGGATGAA------ATGGCTCAAGGA-----------------------GCTTCCACAGCTCCA----CCAAAGGACG-GGCACTGAGGGTCAGGTTTGGAAAGGGAGGAGGGGATGCG-GCCGCGGAGGACTTTCACCGCACACCCATCCGGGAGGCAGGCTCTG---------C--AAAACACTGACTTCTCCTAAGCCTT------ATG----CTtgtggggatgt-aaaatggtgcagttgccACGGAAAGCAGGATGGAGGCTCCTCAGACAAGCAAGCACAGAACTGCCATACGATCCAGcgattccactgctgggtatagaC-GCAAGAGAATCGAAGGCA-GGTC--GCAGACAGGTGCGCAC-GCCCATGCTCACTGCGGCAT-GTTCACAGTAGCTGAAACGTGG-AGCAACCCACACGTCCATC-ACAGGTGAGTGGATACACGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 156709 584 + 75148670 CCGCGGAGATGCCGGAGCCGCCGGAGC----------AGCCCCTCGGGGCAGACGAATTAAGTGACTTTTTCCGGGAATTTAGGAAGCTTCAGT-CGCTGAATG--AAAAAATCCATCTTTGTCATGAGTCACAAACGCACGTCTTCCACGTCGGAATTAGGTTGA-GAGGAGAAAGGACATTGTGAGGCCAATTTGCAGGCGACTTGGATGAA------ATGGCTCAAGGA-----------------------GCTTCCACAGCTCCA----CCAAAGGACG-GGCACTGAGGGTCAGGTTTGGAAAGGGAGGAGGGGACGGG-GCCGCGGAGGACTTTCACCGCACACCCATCTGGGAGGCAGGCTCTG---------C--AAAACACTGACTTCTCCTGAGCCTT------Atg----cttgtggggatgt-aaaacgctgcggttgccacggaaagcaggatggaggctcctcagacaagcaagcaccgaactgccacacgatccagcaattccactgctgggtatagac-gcaagagaatcgaaggca-ggtc--gcagacaggtgcgcac-gcccatgctcactgcggcac-gttcacaacagctgaaacgtgg-agcaacccaaatgtccatc-acaggtgagtggatacacgga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 972001 554 - 1291538 CCTCGGAGAGGTAGGAGCAGCTGGAGC---------AGGCCCCT-GGGGCAGACAAATTAAGTGACTGCTTCCGGGTATTTAGGAAACATCAGC-CACTGAATG--AAAAAATCCATCTCCGTAATGAGGCATAAACACACGTCTTCCACATACAAATTAGGTTGA-GAGGAGAAAGGA----------CCAATTTGCAGGCCACTGGGATGAA------ATGGCTCCGGGA-GCTG----------------CTGCTTCTCCA-CTCCA----CGGAGGGACA-GG--CTGAGGGTGAGGTTTGAAAAGGGAGTAGGGAACGGG-CTGACAGAGGACTTTCACCCCACACCCATCCAGGAGG-AGGCTCTG---------C--AAAAAGCTGACTTCTCCAaaccctt------aca----cttgtgggaacat-aaaatggtgcagctgccacggaaaacaggatggaagcttctcaattaa------acagaatcgccataggatccagcagttcc------------------cgagagactggaaggcaggatc--acagagaggt--gcac-acttgaggtcaccacaacgttactcacaacagctagaacacggaaggaacccagatggccgtc-acagatgagtggataaacaaa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75899914 622 + 122082543 CCTTGGTGACAGGCGAGCTGCCTGAGC---------GGGCCCCTCAGGGCAGAGGAATTAAGTGACTCTTTCCGGGAATTTAGGAAACATCAGT-AGCAGAACGAAAAAAAATCCATCTTTGTAATAAGGCACAAACACACGCCTTCCACATC-AAATTAGGCCGAGGAGGACAAAGGACACAGCGAGGCCAATTCAGAGGCAGCTAGGATAAATATGCTATCACTCAAGGTGGCTGGCGGCTATCTCTATGCTTTCTCTCCCCTCTCCC----CCAGGAGCTGAGGTGCTTAAGATCAGGCTTGGAAAGGGAGGTCAGGATGGGAGCCATTAAGGACTTCCGGCATATTCCAATT-----------CCCTGCCCCCCCCCC--AAAAAAAAGACTTTTTCCTGacttttgcacattg----gtggcggcaatgt-aaaattattcagcccctgtgcagaacagtatggcggctcctcacaaagtca--tgctgaactactgtgggatgcagctatgccactgctgggcatttactcccaggggattggaagcgggatc--tcagagagatcagcac-aaccacacatatagtcacacggtttacaagagctaaattgtgggagcgctcggggtgtccatc-acagatgagtggaccagca-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15722505 552 - 61074082 CCTGGGCAATGCACAAGCAGCAAGAGC---------AGG-CCTGCAGGGCAGGCGAATTAAGTGATTTTTCCCAGGAATTAAGGAAACATGAGTAAGCCGAATG--AAAAAATCCATCTTGGTAATGAGGCACCAATGCACGTCTTCTACATCTGAATTAGGTCATGGAGGAGTAAGGACAAGGTGAGG------------------AGATGAG------G--------------------------------CTGCCTC-----CCCCATGGGCCAGAGCAGA-GCCACTGGAGG-GAGGCTAAGAAGGGGGACAGGGC------GTCCCGAGTGACCTACA--GCTGTCTCATCCAAGGGGCAGGTTGTG---------CGGGGAAAACCATTCCCTCCTagccttc------ctgcaccctggtggcactgtgaaaatggggcggccgccacagagaccaggaggacagctcctcaga-aattagacacagaattaccacatgatccagcaattccacttctgg------------aaaggatggaaagcagagccctgaagagagatttgcacaactcattttcatcgaggcactattcacaacagctaaaatgtggaaacaacccatatttccatcaactgattcatgaatcaacaga i canFam3.chr9 C 0 C 0 a score=33929.000000 s hg38.chr17_GL383563v3_alt 278217 31 + 375691 gtggggtatgcacataca--g------tgaaattttcct s panTro4.chr17 254589 31 + 82630442 gtggggtatgcacataca--g------tgaaattttcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 134801 31 + 73212453 gtggggtatgcacataca--a------tgaaatgttcct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 256873 31 - 81552678 gtggggtatgcacataca--a------tgaactgttccc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 173047 22 + 80997621 ---------gcgcgtgca--a------cgaaacgttcct i macFas5.chr16 C 0 I 1 s papAnu2.chr16 167204 22 + 74645514 ---------GCGCGTGCA--A------CGAAATGTTCCT i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 157293 22 + 75148670 ---------gcgcgtgca--a------cgaaacgttcct i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 972555 28 - 1291538 -----acacggatgtgcaccg------tgaaatgccctc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75900536 35 + 122082543 --gaagtatggtcaaaga--gtcaccttgaaatgttagt i mm10.chr11 C 0 C 0 s canFam3.chr9 15723057 31 - 61074082 gtgtgttacatacaccca--g------tggaatattatt i canFam3.chr9 C 0 C 0 e rheMac3.chr16 167537 23 + 80904711 I a score=164104.000000 s hg38.chr17_GL383563v3_alt 278248 69 + 375691 c-gccttaaaaaggatggaaattcctacacatgctacatcatggatgaaccttgaaagcattatgcaaag s panTro4.chr17 254620 69 + 82630442 c-gcctcaaaaaggatggaaattcctacacatgctacatcatggatgaaccttgaaagcattatgcaaag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 134832 70 + 73212453 cagccttaaaaaggatggaaattcctacacatgctacaccgtggatgaaccttggaagcattacgcaaag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 256904 70 - 81552678 cagccttaaaaagggtggaaattcctacacatgctacatcgtggatgaaccttgaaagcattatgcaaag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 167560 55 + 80904711 -cgccttaaacaggatggaaattgcgac--------------ggatgaaccttgaaagcattacgcaaag i rheMac3.chr16 I 23 C 0 s macFas5.chr16 173070 55 + 80997621 -cgccttaaacaggatggaaattgcgac--------------ggatgaaccttgaaagcattacgcaaag i macFas5.chr16 I 1 C 0 s papAnu2.chr16 167227 55 + 74645514 -CGCCTTGAACAGGATGGAAATTCCgac--------------ggatgaaccttgaaagcattaCGCAAAG i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 157316 55 + 75148670 -cgccttaaacgggatggaaattccgac--------------agataaacctcgaaagcattacgcaaag i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 972583 68 - 1291538 -agccttagaaaggacggaaatcctgacgcctgcaatgtcacagatgaaccttgaaa-ccttatgcaaag i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75900571 44 + 122082543 -cccttcataaaggaga-------------------------ggaTGGCACTTGAAGACatcacgctaat i mm10.chr11 C 0 C 0 s canFam3.chr9 15723088 70 - 61074082 tggccttaaaaaggcaggaaattctgacaccagctaccacgtggacagaccttgaggacatcatgctaag i canFam3.chr9 C 0 I 3019 a score=846968.000000 s hg38.chr17_GL383563v3_alt 278317 284 + 375691 ggcacctggttaaactgcagcttctagtttgggaggtctgtgggggcctgagattctgcatttctaatgaacatccaggtga--------------ggtcctcggcccacactttgagtagcaGAGACCCCATCAGCACCTGAATTCTCTCCTAGCCCTAATGCCTCCACCTCCAGGAGCAGCTCTCTGTAAACTGGATGGGGCCAGGACCCCCACAGCTTCCCAAGGCAGA-AGGAGAATACTTCTCAGAGGTTAGCAGACTCTCTCTAGGCAGCTGCTGCAGGCAGGTCACAAATCG s panTro4.chr17 254689 284 + 82630442 ggcacctggttaaactgcagcttcgagtttgggaggtctgtgggggcctgagattctgcatttctaatgaacatccaggtga--------------ggtcctcggcccacactttgagtagcaGAGACCCCATCAGCACCTGAATTCTCTCCTAGCCCTAATGCCTCCACCTCCAGGAGCAGCTCTCTGTAAATTGGATGGGGCCAGGACCCCCACAGCTTCCCAAGGCAGA-AGGAGAATACTTCTCAGAGGTTAGCAGACTCTCTCAAGGCAGCTGCTGCAGGCAGGTCACAAATCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 134902 284 + 73212453 gggacctggttaaactgcagcttctagtttgggaggtctgtgggggcctgagattctgcatttgtaatgaacatccagggga--------------ggtcctcggcccacactttgagtagcaGAGACCCCATCAGCACTTGAACTCTCTCCTAGCCCTAAAGCCTCCACCTCCAGGAGGAGCTCTCTGTAAACTGGATGGGGCCAGGACCCCCACACCTTCCCAAGGCAGA-AGGAGAATACTTCTCAGAGGTTAGCAGACTCTCTCTAGGCAGCTGCTGCAGGCAGGTCACAAATCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 256974 284 - 81552678 gggacctggttaaactgcagcttctagtttgggagggctgtgggggcctgagattcggcatttgtaataaacatccaggtga--------------ggtcctcggcccacactttgagtagcaGAGACCCCATCAGCACCTGAACTCTCTCCTAGCCCTAATGCCTCCACCTCCAGGAGGAGCTCTCTGTAAAGTGGATGGGGCCAGGACCCCCACAGCTTCCCAAGGCAGA-AGGAGAATACTTCCCAGAAGTTAGTAGACTCTCTCTAGGCAGCTGCTGCAGGCAGGTCACAAATCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 167615 295 + 80904711 gggatctggttacactgaagcttccagtttgggaggtctgtgggggcctgatattctgcatttgtaatgaacatccaggggagggtccacatcactggtcctcggcccacactttgaatagcaGAGACCCCATCAGCACCGGAACTCTCCGCTAGCCCTAACGCCTCCACCTCCAGGAGGAGCTCTCTGTAAACTGGACGGTGCCGGGACCCCCACAGCTTCCCAAGGC----AGGAGAATACCCCTCAGGGGTGAGCAGACTCTCTCCAGGCAGCTGCTGCAGGCAGGTCACGAATCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 173125 295 + 80997621 gggatctggttacactgaagcttccagtttgggaggtctgtgggggtctgagattctgcatttgtaatgaacatccaggggagggtccacatcactggtcctcggcccacactttgggtagcaGAGACCCCATCAGCACCGGAACTCTCCGCTAGCCCTAACGCCTCCACCTCCAGGAGGAGCTCTCTGTAAACTGGACGGTGCCGGGACCCCCACAGCTTCCCAAGGC----AGGAGAATACCCCTCAGGGGTGAGCAGACTCTCTCCAGGCAGCTGCTGCAGGCAGGTCACGAATCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 167282 294 + 74645514 GGGGTCTGGTCAAACTGAAGCTTCCAGTCTGGGAGGTCTGT-GGggtctgagattctgcatttgtaATGAACATCCAGGGGAGGGTCCACATCACTGGTCCTCGgcccacactttgagtagcagaGACCCCATCAGCACCGGAACTCTCCGCTAGCCCTAACGCCTCCATCTCCAGGAGGAGCTCTCTGTAAACTGGATGGTGCCGTGACCCCCACAGCTTcccaaggc----aggagaataccCCTCAGGGGTGAGCAGACTCTCTCCAGGCAGCTGCTGCAGGCAGGTCACGAATCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 157371 294 + 75148670 gggatctggttacactgaagcttccagtttgggaggtctgtgggggcctgagattctgcatttgtaatgaacacccagggga-gatgcacatcactggtccttggcccacactttgagtagcaGAGACCCCATCAGCACCGGAGCTCTCCGCTAGCCCTAACGCCTCCACCTCCAGGAGGAGCTCTCTGTAAACCGGACGGGGCCGGGACCCCCACAGCTTCCCAAGGC----AGGAGAACACCCCTCAGGGGTGAGCAAACTCTCTCAAGGCAGCTGCTGCAGGCAGGTCACGAATCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 972651 289 - 1291538 ggg-cctggttaaactgcagcttctagcctgggaggtctg--gggggctgagattctgcatttttaatgaacacccaggcga-caaccacatcactggtcctcggcccacactttgagcagcaaggACCCGGGCAGCACCTGAATCCTCTCCTGGCCCTTATGCCTCCACCTCCAGGAGGAGCTCTCTGTAAACTGGATGGGGCCAGGACCCCCACAGCTTCCCCAGAC----AGGAAACGACTTCTCAG--GTGAGCAGACTCTCTCTCGAGTGCTGCTGCAGGCACGTCAGGGGTCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75900615 281 + 122082543 ga-atctgatgaaa-tgcagactctggctcaggaggttccaggggggctgagaatctgctcttccagccagcactgaaggac--gtctgtgcctctggtcctccgtctgtactttgcgtagcTG-----------GCACTTGAGTTCTTTGACTCCTCTGGTGTCTCCATCTGCAGGAGGTGGTCTCTGAGGACTAGCTGGGG--AGCACTCCCAGATCCTCACAAGGAGCACGTGAGATCTCTGTTCAGA-ATCAGCAGGCTTTCTAGGAAGTGCTGCAGCCAGCGGATCCCAAGCTG i mm10.chr11 C 0 I 154 e canFam3.chr9 15723158 3019 - 61074082 I a score=1230647.000000 s hg38.chr17_GL383563v3_alt 278601 445 + 375691 CCACCATCTCTAAGACTGGAGGACTGGCTGCTGGGAATAAAGCAGTGATGGAggctggctgtggtggctcaagcctgtaatcccagcactttgagaggccgaggcaggaggatcatttgagccaggagtttgagaccagcctgggcaacatagc-agaccctgtctctacaaaaaataaaaaattttccaggcgaggtggtgcatgactgtggtcctagctcctagggaggccgaggtgggaggatcgattgagcccaggagtttgaggctgcagtgagccctgtttgccactgcactccagcctgggcggcagagctagaccttgtctcttaaaaaaGGAG----------------------------------------------------------CACTCCTCCTGCTCTGTCCATGGCTTCCT-GGCCTCGAGTCCCAGATACCAAACAGAGAGGGAAGCTGAAGCCTTAGGAAAATGGCATGTACCCCGCCCTGCCC--A s panTro4.chr17 254973 445 + 82630442 CCACCATCTCTAAGACTGGAGGGCTGGCTGCTGGGAATAAAGCAGTGATGGAggctgcgtgtggtggctcacgcctgtaatcccagcactttgagaggccgagggaggaggatcatttgagccaggagtttgagaccagcctgggcaacatagc-agaccctgtctctacaaaaaataaaaaattttccaggcgaggtggtgcatgactgtggtcctagctcctagggaggctgaggtgggaggatcgattgagcccaggagtttgaggctgcagtgagctgtgtttgccactgcactccagcctgggcgacagagctagaccttgtctcttaaaaaaGGAG----------------------------------------------------------CACTCCTCCTGCTCCGTCCATGGCTTCCT-GGCCTTGAGTCCCAGATACCGAACAGAGAGGGAAGCTGAAGCCTTAGGAAAATGGCATGTCCCCCGCCCTGCCC--A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 135186 493 + 73212453 CCACCATCTCTAAGAGTGGAGGGCTGGCTGCTGGGAATAAAACAGTGATGGAggctgggtgtggtggctcacacctgtaatcccagcactttgagaggccgaggcaggaggatcatttgagccaggagtttgagaccagcctgagcaacatagc-agaccctgtctctacaaaaaacaaaaaattatccaggcgaggtggtgcatgactgtggttctagctactagggaggctgaggtgggaggatcgattgagcccaggagtttgaggctgcagtgagccgtgtttgccactacactccagcctgggaggcagagcaagaccttgtctcttaaaaaaGGAGCACACTGATGGAGAGGGTC-GGGCTCT-------GCAGGCAG--AAGAGCAACAAGGACACTCCTCCTGCTCCGTCCATGGCTTCCT-GGCCTCGAGTCCCAGATACTGAACAGAGAGGGAAGCTGAAGACTTAGGAAAATGGCATGTCCCCCGCCCAGCCC--A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 257258 492 - 81552678 CCACCATCCGTACGAGTGGAGGGCTGGCTGCTGGAAATAAAACAGTGATGGAggctgggtgtggtggctcacgcctgtaatcccagcactttgagaggccgaggaaggaggatcatttgagccaggagtttcagagcagcctgggcaacatagc-agaccctgtctctgcaaaaaacaaaaaattatccaggcgaggcagtgcatgactgtagtcctagctactagggaggctgaggtgggaggatcgactgagcccaggagtttgaggctgcagtgagccatgtttgccactgcactccagcctgggaggcagagctagaccttatctcttacaaaaGGGGCACACTGATGGAGTGGCTCTAGAGTCG-------ACCTGCAGGCATGAGTAACAAGGACA---CTCCTGCTCCTTCCATGGCTTCCTGGGCCTCGACTCCCAGATACTGAACAGAGAGGGAAGCAG-AGCCTTA-GAAAATGGCATGTCCCCTGCCCTGCCC--C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 167910 493 + 80904711 CGGCCATGTCTAAGAGCGGAGGGCTGGCTGCTGGGAATAAAGCAGTGATGGAggctgggtgcggtggctcacgcctataatcccagcactttgagaggccgaggcaggaagatcatttgagccaggagtttgagatcagcctgggcaacatagcaagaccctgtctctacaaaaaataaaaaattacccaggcgaggtggtgcacgcctgtagtccgagctacaagggaggctgaggtaggaggatcaattgagcctaggagtttgaggctgcagtgagctgtgtttgccgctgcactccagcctgggaggcagagcaagaccttgtctcttaaaaaaggaaCACACTGATGGAAAGAGTC-CGGCTCT-------GCAGGCAG--AAGAGCGACAAGGACACTCCCCCTGCTCCTTCCACAGCTTCAG-GGCCTCGAGTCCCAGATACTGAACAGAGAGGGAAGCTGAAACCTTAGGAAAATGGCATGTCCCCCACCCAGCCC--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 173420 493 + 80997621 CGGCCATGTCTAAGAGCGGAGGGCTGGCTGCTGGGAATAAAGCAGTGATGGAggctgggtgcggtggctcacgcctataatcccagcactttgagaggccgaggcaggaggatcatttgagccaggagtttgagatcagcctgggcaacatagcaagaccctgtctctacaaaaaacaaaaaattacccaggcgaggtggtgcacgcctgtagtctgagctatgagggaggctgaggtaggaggatcgattgagcctaggagtttgaggctgcagtgagctgtgtttgccgctgcactccagcctgggaggcagagcaagaccttgtctcttaaaaaaggaaCACACTGATGGAAAGAGTC-CGGCTCT-------GCAGGCAG--AAGAGCGACAAGGACACTCCCCCTGCTCCTTCCACAGCTTCAG-GGCCTCGAGTCCCAGATACTGAACAGAGAGGGAAGCTGAAACCTTAGGAAAATGGCATGTCCCCCACCCAGCCC--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 167576 494 + 74645514 CCGCCATGTCTAAGAGTGGAGGGCTGGCTGCTGGGAATAAAGCAGTgatggaggctgggtgcggtggctcacgcctataatcccagcactttgagaggccgaggcaggaggatcatttgagccaggagtttgagatcagcctgggcaacatagcaagaccctgtctctacaaaaactaaaaaattacccaggcgaggtggtgcatgcctgtagtccgagctatgagggaggctgaggtaggaggatcgattgagcctaggagtttgaggctgcagtgagctgtgtttgccgctgcgctccagcctgggaggcagagcaagaccttgtctcttaaaaaaggaaCACACTGATGGAAAGAGTC-GGGATCT-------GCAGGCAG--AAGAGCAACAAGGACACTCCCCCTGCTCCTTCCACAGCTTCAG-GGCCTCGAGTCCCAGATACTGAACAGAGAGGGAAGCAGAAACCTTAGGAAAATGGCATGTCCCCCATCCAGCCCC-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 157665 493 + 75148670 CTGCCATGTCTAAGAGTGGAGGGCTGGCTGCTGGGAATAAAGCAGTGATGGAggctgggtgcggtggctcacgcctataatcccagcactctgagaggccgaggcaggaggatcatttgagccaggagtttgagatccacctgggcaacatagcaagaccctgtctctacaaaaa-taaaaaattacccaggcgaggtggtgcacgcctgcagtccgagctacgacggaggctgaggcaggaggatcgatggagcctaggagtttgaggctgcagtgagctgtgtttgctgctgcactccagcctgggaggcagagcaagaccttgtctcttaaaaaaggaaCACACTGATGGAAAGAGTC-GGGTTCT-------GTAGGCAG--AAGAGCGACAAGGACACTCCCCCTGCTCCTTCCACAGCTTCAG-GGCCTCGAGTCCCAGATACTGAACAGAGAGGGAAGCTGAAACCTTAGGAAAATGGCACGTCCCCCACCCAGCCT-A- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 972940 481 - 1291538 CTGCCACCTCCACGAGCGGAGGGCAGG-TGCTGGGAATGAAACAGTGAC-GAggccggacaccggggctcacgcct-tcatcccagcactttgacagaccgaggcaggagggtcatctgagccaggagtttgagactagcctgggcaacagagcaagaccctgtctctacaaaaaataaaaaattatccaggcaaggcagtgcatgcctgtagacctagctcctagggagg-tgaggtaggaggatcgatggagctgaggagtttaaggttgcagtgagcca--tcaaccactgcactgcagcctgggtggcaggccaagacctcgtctcttaaaa--------TGCTGCCAGAGAGGGCA-GAGCTCTGCAGTGGGCAGGCAG--CAGAGTGA-ACAGACA---CTCCTGCTCCTCCCGTGGCTTCAC-GGCCTGGAGTCCCAGAAACTGAAC--AGAGGGAAACCGAAGCTTTAGGAAAACGGCGTGTCCCCCACCCAGCCC--A i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I a score=1883.000000 s hg38.chr17_GL383563v3_alt 279046 1 + 375691 G s panTro4.chr17 255418 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 135679 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 257750 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168403 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 173913 1 + 80997621 G i macFas5.chr16 C 0 C 0 s chlSab2.chr16 158158 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 973421 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e papAnu2.chr16 168070 0 + 74645514 C a score=29044.000000 s hg38.chr17_GL383563v3_alt 279047 18 + 375691 GGCTCCTGCCAG-CCCCCT s panTro4.chr17 255419 19 + 82630442 GGCTCCTGCCAGCCCCCCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 257751 18 - 81552678 GGCTCCTGCCAG-ACCCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168404 19 + 80904711 GGCTCCTACCAACGCCCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 173914 19 + 80997621 GGCTCCTACCAACGCCCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168070 19 + 74645514 AGCTCCTGCCAACGCCCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158159 18 + 75148670 -ACTCTTGCCAGCATCCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 973422 18 - 1291538 GGCTCCTGCCAGCCCCCT- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e ponAbe2.chr17 135680 0 + 73212453 C a score=9831.000000 s hg38.chr17_GL383563v3_alt 279065 17 + 375691 GCTGGGGGTCC----------------------------------------------------------GGGATA s panTro4.chr17 255438 17 + 82630442 GCCGGGGGTCC----------------------------------------------------------GGGATA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 257769 17 - 81552678 GCCGTGGGTCC----------------------------------------------------------AGGATA i nomLeu3.chr19 C 0 I 114 s rheMac3.chr16 168423 16 + 80904711 GCCG-GGGTCT----------------------------------------------------------GGGATA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 173933 74 + 80997621 GCCG-GGGTCTGGGATATGCCATGTCCCCCATCCAGCCCGGGCTCCTACCAACGCCCCTGCTGGGGTCCGGGATA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168089 16 + 74645514 GCCG-GGGTCC----------------------------------------------------------GGGATA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158177 16 + 75148670 GTGG-GGGTCC----------------------------------------------------------GGGATA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=16821.000000 s hg38.chr17_GL383563v3_alt 279082 19 + 375691 CGGCACGTCCCTT-----GTCCAG s panTro4.chr17 255455 19 + 82630442 CGGCACGTCCCTT-----GTCCAG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 168439 19 + 80904711 CGGCATGTCCCCC-----GCCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174007 19 + 80997621 CGGCATGTCCCCC-----GCCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168105 24 + 74645514 CAGCATGTCCCCCATCCAGCCCCG i papAnu2.chr16 C 0 T 59 s chlSab2.chr16 158193 19 + 75148670 CGGCATGTCCCCT-----ACCCCA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e nomLeu3.chr19 257786 114 - 81552678 I e ponAbe2.chr17 135680 0 + 73212453 C a score=67438.000000 s hg38.chr17_GL383563v3_alt 279101 46 + 375691 GGCTCCTGCCAGCCCCCCTGCTGGGG---------GTCCGGGATATGGCATGTCC s panTro4.chr17 255474 46 + 82630442 GGCTCCTGCCAGCCCCCCTGCTGGGG---------GTCCGGGATATGGCACATCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 257900 46 - 81552678 GGCTTCTGCCAGTCCCCCTGCCGGGG---------GTCCGGGATATGGCATGTCC i nomLeu3.chr19 I 114 T 60 s rheMac3.chr16 168458 55 + 80904711 GGCTCCTGCCAGCGTCCCTGCGGGGACTGCCGGGGGTCCGGGATATGGCATGCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174026 45 + 80997621 GGCTCCTGCCAGCGTCCCTGCGGGGA----------TCTGGGATGTGGCATGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168070 45 + 74645514 AGCTCCTGCCAACGCCCCTGCCGGGG----------TCCGGGATACAGCATGTCC i papAnu2.chr16 T 59 C 0 s chlSab2.chr16 158212 45 + 75148670 GGCTCCTGCCAGCGCCCCTGCGGGGG----------TCCGGGATACGGCATGTCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=29530.000000 s hg38.chr17_GL383563v3_alt 279147 26 + 375691 CCCGCCCTGCCCAGGGCTCCTGCCAG s panTro4.chr17 255520 26 + 82630442 CCTACCCTGCCCCAGGCTCCTGCCAG i panTro4.chr17 C 0 I 58 s nomLeu3.chr19 257886 26 - 81552678 CCTGCTCTGTCACAGGCTTCTGCCAG i nomLeu3.chr19 T 60 C 0 s rheMac3.chr16 168513 21 + 80904711 CCC-----GCCCCAGGCTCCTGCCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174071 26 + 80997621 CCCATCCAGCCCCGGGCTCCTGCCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168115 26 + 74645514 CCCATCCAGCCCCGGGCTCCTGCCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158257 20 + 75148670 CC------AGCCCAGGCTCCTGCCAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=845.000000 s hg38.chr17_GL383563v3_alt 279173 1 + 375691 C s nomLeu3.chr19 257912 1 - 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168534 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174097 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168141 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158277 1 + 75148670 C i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C e panTro4.chr17 255546 58 + 82630442 I a score=54607.000000 s hg38.chr17_GL383563v3_alt 279174 37 + 375691 CCCCCTGCTGGGGGTCCGGGATATGGCACGTCCCCTG s panTro4.chr17 255604 37 + 82630442 CCCCCTGCTGGGGGTCCGGGATATGGCACATCCCCTA i panTro4.chr17 I 58 C 0 s nomLeu3.chr19 257913 37 - 81552678 CCCCCTGCCGGGGGTCCGGGATATGGCATGTCCCCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168535 36 + 80904711 ACCCCTGCC-GGGGTCCGGGATATGGCATGTCCCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174098 37 + 80997621 GCTCCTGCTGGGGGTCCAGGATACGGCATGTCCCCCA i macFas5.chr16 C 0 I 228 s papAnu2.chr16 168142 36 + 74645514 GCCCCTGCC-GGGGTCCGGGATACGGCATGTCCCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158278 36 + 75148670 GCCCCTGCG-GGGGTCCGGGATACGGCATGTccccag i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=23331.000000 s hg38.chr17_GL383563v3_alt 279211 23 + 375691 CCCTGCCCCAGGCTCCTGCCAGC s panTro4.chr17 255641 23 + 82630442 CCCTGCCCCAGGCTCCTGCCAGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 257950 23 - 81552678 CCCTGCCCCAGGCTCCTGCCAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168571 22 + 80904711 -TCCAGCCCAGGCTCCTGCCAGC i rheMac3.chr16 C 0 I 1 s macFas5.chr16 174363 23 + 80997621 CCCCGCCCCAGGCTCCTGCCAGC i macFas5.chr16 I 228 I 117 s papAnu2.chr16 168178 23 + 74645514 TCCAGCCCCGGACTCCTGCCAGT i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 158314 7 + 75148670 -----ccccagc----------- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=629.000000 s hg38.chr17_GL383563v3_alt 279234 40 + 375691 CTCCTGCTGGGGGTCCAGGATATGGCACGTCCCCC-------------------------------------------------------------GTCCA s panTro4.chr17 255664 100 + 82630442 C-CCTGCTGGGGGTCCGGGATATGGCATGTCCCCCCGCCCAGCCCAGGGCTCCTGCCAGCCCCCCTGCCGGGGGTCTGCGATACAGCACGTCCCTTGTCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 257973 1 - 81552678 C---------------------------------------------------------------------------------------------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168594 39 + 80904711 -TCCCTGCCGGGGTCCGGGATATGGCATGTCCCCT-------------------------------------------------------------ATCCA i rheMac3.chr16 I 1 I 269 s macFas5.chr16 174503 39 + 80997621 -CCCCTGCTGGGGTCCAGGATATGGCATGTCCCCT-------------------------------------------------------------ATCCA i macFas5.chr16 I 117 I 4 s papAnu2.chr16 168202 39 + 74645514 -CCCCTGCCGGGGTCCGGGATACGGCATGTCCCCC-------------------------------------------------------------ATCCA i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 158321 16 + 75148670 -------------tcc-----------tgtcccca-------------------------------------------------------------gccca i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=47007.000000 s hg38.chr17_GL383563v3_alt 279274 69 + 375691 GGGCTCCTGCCA-GCCCCCTGCTGGGGGTCTGGGATATGGCACGTCCCCTGCCCTGCCCCAG------------------GCTCCTGC s panTro4.chr17 255764 70 + 82630442 GGGCTCCTGCCAAGCCCCCTGCTGGGGGTCCAGGATATGGCACGTCCCCTACCCTGCCCCAG------------------GCTCCTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 257974 55 - 81552678 ---------------CCCCTGCCGGGGGTCCGGGATATGGCATGTCCCCTGCCCTGCCCCAG------------------GCTCCTGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168902 65 + 80904711 ACGCTCCTGCCAGCGCTCCTGCCGGGGGTCCGGGATATGGCATGCC-----CCCCGCCCCAG------------------GCTCCTGC i rheMac3.chr16 I 269 C 0 s macFas5.chr16 174546 65 + 80997621 GGGCTCCTGCCAGCGCTCCTGCCGGGGGTTCGGGATATGGCATGCC-----CCCCGCCCCAG------------------GCTCCTGC i macFas5.chr16 I 4 C 0 s papAnu2.chr16 168241 14 + 74645514 --------GCCCGCGCCCCTGC------------------------------------------------------------------ i papAnu2.chr16 C 0 T 176 s chlSab2.chr16 158337 81 + 75148670 -ggctcctgccagcgcccctgc-gggggtccgggatacggcatgtc-----cccagccccagctcctgtccccagccccagctcctgc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=6358.000000 s hg38.chr17_GL383563v3_alt 279343 5 + 375691 CAGCC s panTro4.chr17 255834 5 + 82630442 CAGCC i panTro4.chr17 C 0 I 114 s nomLeu3.chr19 258029 5 - 81552678 CAGCC i nomLeu3.chr19 C 0 I 1 s rheMac3.chr16 168967 5 + 80904711 CAGCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174611 5 + 80997621 CAGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168079 5 + 74645514 CAACG i papAnu2.chr16 T 176 C 0 s chlSab2.chr16 158418 5 + 75148670 cagcg i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=3654.000000 s hg38.chr17_GL383563v3_alt 279348 2 + 375691 -TC s panTro4.chr17 255953 2 + 82630442 -CC i panTro4.chr17 I 114 C 0 s nomLeu3.chr19 258035 2 - 81552678 -CC i nomLeu3.chr19 I 1 C 0 s rheMac3.chr16 168972 3 + 80904711 CCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174616 3 + 80997621 CCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168084 3 + 74645514 CCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158423 3 + 75148670 ccc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75900896 154 + 122082543 I e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=40090.000000 s hg38.chr17_GL383563v3_alt 279350 37 + 375691 CTGCTGGGGGTCCA--------------------------------------------------------GGATACGGCATGTCCCCTGCCCT s panTro4.chr17 255955 93 + 82630442 CTGCTGGGGGTCCAGGATATGGCACATCCCCTACCCTGCGGCTCCTGCCAGCCCCCCTGCTGGGGGTCTGGGATATGGCACGTCCCCTGCCCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 258037 37 - 81552678 CTGCCAGGGATCCG--------------------------------------------------------GGATATGGCATGTCCCCTGCCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 168975 36 + 80904711 CTGCC-GGGGTCCG--------------------------------------------------------GGATATGGCATGTCCCCCGTCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174619 36 + 80997621 CTGCC-GGGGTCCG--------------------------------------------------------GGATATGGCATGTCCCCCATCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168087 36 + 74645514 CTGCC-GGGGTCCG--------------------------------------------------------GGATACAGCATGTCCCCCATCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158426 32 + 75148670 ctgcA-GGGGTCCG--------------------------------------------------------GGATACGGCATGTCCCCCA---- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75901050 40 + 122082543 CTGCTTAGGGTTCAGGG-----------------------------------------------------GGAAATGACATAGCCTCTTTCTA i mm10.chr11 I 154 C 0 e canFam3.chr9 15723158 3019 - 61074082 I e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=14089.000000 s hg38.chr17_GL383563v3_alt 279387 6 + 375691 GCCCCA s panTro4.chr17 256048 6 + 82630442 GCCCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 258074 6 - 81552678 GCCCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 169011 5 + 80904711 -CCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174655 5 + 80997621 -CCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168123 6 + 74645514 GCCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158458 5 + 75148670 -CCCCA i chlSab2.chr16 C 0 C 0 s mm10.chr11 75901090 6 + 122082543 GCCTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15726177 6 - 61074082 GCCCCA i canFam3.chr9 I 3019 C 0 e calJac3.chrUn_GL286409 973440 0 - 1291538 C e ponAbe2.chr17 135680 0 + 73212453 C a score=45018.000000 s hg38.chr17_GL383563v3_alt 279393 18 + 375691 GGCTCCTGCCA-GCCCCCC s panTro4.chr17 256054 19 + 82630442 GGCTCCTGCCAAGCCCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 135680 18 + 73212453 GGCTCCTGCCA-GGCCCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 258080 18 - 81552678 GGCTCCTGCCA-GCCCCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 169016 18 + 80904711 CGCTCCTGCCA-GCGCCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174660 18 + 80997621 CGCTCCTGCCA-GCGCCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168129 18 + 74645514 GGCTCCTGCCA-GCGCCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158463 18 + 75148670 GGCTCCTGCCA-GCGCCCC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75901096 16 + 122082543 GGTTACTGCCA-CTCTC-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15726183 18 - 61074082 GGTTCCTGGAG-GCTCCCC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 973440 0 - 1291538 C a score=-1713.000000 s hg38.chr17_GL383563v3_alt 279411 4 + 375691 -TGCC s panTro4.chr17 256073 4 + 82630442 -TGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 135698 4 + 73212453 -TGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 258098 4 - 81552678 -TGCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 169034 4 + 80904711 -TGCC i rheMac3.chr16 C 0 I 1 s macFas5.chr16 174678 3 + 80997621 -TG-C i macFas5.chr16 C 0 I 1 s papAnu2.chr16 168147 4 + 74645514 -TGCC i papAnu2.chr16 C 0 I 104 s chlSab2.chr16 158481 3 + 75148670 -TGC- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 973440 4 - 1291538 -GGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75901112 3 + 122082543 -TGC- i mm10.chr11 C 0 C 0 s canFam3.chr9 15726201 4 - 61074082 TGGC- i canFam3.chr9 C 0 C 0 a score=-2317.000000 s hg38.chr17_GL383563v3_alt 279415 1 + 375691 -A s panTro4.chr17 256077 1 + 82630442 -G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 135702 1 + 73212453 -G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 258102 1 - 81552678 -G i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 158484 1 + 75148670 -G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 973444 1 - 1291538 -A i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15726205 1 - 61074082 T- i canFam3.chr9 C 0 C 0 e mm10.chr11 75901115 0 + 122082543 C e papAnu2.chr16 168151 104 + 74645514 I e rheMac3.chr16 169038 1 + 80904711 I e macFas5.chr16 174681 1 + 80997621 I a score=826507.000000 s hg38.chr17_GL383563v3_alt 279416 277 + 375691 -GGGGTCCGGGATGACTCTCAGCAGGACACATCCCCTCCTCGGTGCAAAGTGGGCTCAAGCCAGGTTAGGGGAAAG---------GTCAGGTTCTGACCCAGCCCCTTCCCT-----------CCATGCTGGGCTGGGTAATACCTGCCCC----CA--------GCC---TGAGCTGGA-CCTCCTCTAAGGGACGTGGGCAAAATATAAGACTGCC-CAGTCTTCCTTCAT-GAAGACTC--------------AGGTCA-----------TCGTTTCATAGGCAGGCTCCCCTGCACCCACACTGTGGGACACC-TTTGGCTGAGACCAGAAAAAAAAA- s panTro4.chr17 256078 276 + 82630442 -GGGGTCCGGGATGACTCTCAGCAGGACACATCCCCCTCTCGGTGCAAAGTGGGCTCAAGCCAGGTTGGGGAAAAG---------GTCAGGTTCTGACCCAGCCCCTTCCCT-----------CCATGCTGGGCTGGGTGATACCTGCCCC----CA--------GCC---TGAGCTGGA-CCTCCTCTGAGGGATGTGGGCAAAATATAAGACTGCC-CAGTCTTCCTTCAT-GAAGACTC--------------AGGTCA-----------TCATTTCATAGGCAGGCTCCCCTGCACCCACACTGTGGGACACC-TTTGGC-GAGACCAGAAAAAAAAA- i panTro4.chr17 C 0 M 1679 s ponAbe2.chr17 135703 277 + 73212453 -GGGGTCCGGGATGACTCTCAGCAGGACACATCCCCTCCTCGGTGCAAAGTGGGCTCAAGCCAGGTTGGGGGAAAG---------GTCAGGTTCTGGCCCAGCCCCTTCCCT-----------CCACGCTGGGCTGGGTGATACCTGCCCC----CA--------GCC---TGAGCTGGA-CCTCCTCTAAGGGACTTGGGCAAAATAAAAGACTGCC-CAGTCTTCCTTCAT-TAAGATTC--------------AGGTCA-----------TCGTTTCATAGGCAGGCTCCCCTGCACCCACACTGTAGGACACC-TTCGGCTGAGACTAGAAAAAAAAA- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 258103 278 - 81552678 -GGGGTCCCGGATGACTCTCAGCAGGACACATCCCCTCCTCGGTGCAAAGTGGGCTCAAGCCAGGTTGGGGGAAAG---------GCCAGGTTCTGGCCCAGCCCCTTCCCT-----------CCACGCTGGGCTGGGTGATACCTGCCCC----CA--------ACC---TAAGCTGGACCCTCCTCTAAGGGACTTGGGCAAAATATAAGACTGCC-CAGTCTTCCTTCAT-TAAGACTC--------------AGGTCA-----------TCGTTTCACAGGCAGGCCCCCCTGCACCCACACTGTGGGACACC-TTTGGCTGAGACCAGAAAAAAAAA- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 169039 271 + 80904711 -GGGGTCCGGGATGACTCTCAGCAGGACACACCCCCTCCTCAGAGCAAAGTGGGCTCAAGCCAGGTTGGGGGAAAG---------GTCAGGTTCTGGCCCAGCCCCTTCTCT-----------CCATGCTGGGCCGGGTGGTACCTGCCCC--------------ACC---CGAGCTGGA-CCTCCTCTAAGCGACTCGGGC-AAGTATGAGACTGCC-CGGTCTTCCTCCAT-TAGGACTC--------------AGGCCA-----------TCGTTTCATA-GCAGGCTCCCCGGCACCCACACTGTGGGACACA-TTTGGCTGAGACCAGGAAAAAA--- i rheMac3.chr16 I 1 C 0 s macFas5.chr16 174682 271 + 80997621 -GGGGTCCGGGATGACTCTCAGCAGGACACACCCCCTCCTCAGAGCAAAGTGGGCTCAAGCCAGGTTGGGGGAAAG---------GTCAGGTTCTGGCCCAGCCCCTTCTCT-----------CCATGCTGGGCCGGGTGGTACCTGCCCC--------------ACC---CGAGCTGGA-CCTCCTCTAAGTGACTCGGGC-AAATATGAGACTGCC-CGGTCTTCCTCCAT-TAGGACTC--------------AGGGCA-----------TCGTTTCATA-GCAGGCTCCCCGGCACCCACACTGTGGGACACA-TTTGGCTGAGACCAGAAAAAAA--- i macFas5.chr16 I 1 C 0 s papAnu2.chr16 168255 271 + 74645514 -GGGGTCCGGGATGACTCTCAGCACGACACACCCCCTCCTCAGAGCAAAGTGGGCTCAAGCCAGGTTGGGGGAAAG---------GTCAGGTTCTGGCCCAGCCCCTTCTCT-----------CCATGCTGGGCCGGGTGGCACCTGCCCC--------------ACC---TGAGCTGGA-CCTCCTCTAAGTGACTCGGGT-AAATATGAGACTGCC-CAGTCTTCCTCCAT-TAGGACTC--------------AGGCCA-----------TCGTTTCATA-GCAGGCTCCCCGGCACCCACACTGTGGGACACA-TTTGGCTGAGACCAGaaaaaaa--- i papAnu2.chr16 I 104 C 0 s chlSab2.chr16 158485 271 + 75148670 -GGGGTCCGGGATGACTCTCAGCAGGACACACCCCCTCCTCAGAGCAAAGTGGGCTCAAGCCAGGTTGGGGTAAAG---------GTCAGGTTCTGGTCCAGCCCCTTCTCT-----------CCATGCTGGGCTGGGTGGCACCTGCCCC--------------ACC---TGAGCTGGA-CCTCCTCTAAGTGACTCGGGC-AAATATGAGACTGCC-CAGTCTTCCTCCAT-TAGAACTC--------------AGGCCA-----------TCGTTTCATA-GCAGGCTCCCCGGCACCCACAATGTGGGGCACA-TTTGGCTGAGACCAGAAAAAAA--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 973445 280 - 1291538 -GGGGCCCAAGATGA--CTCAGCAGGATACACACCCTCCTCAGAGCCAAGTGGGCTCAAGCCAGGCTGGAGGGAGG---------GTCAGGTTCTGGCCCAGCCCCTTCCCT-----------CCAAGCTGGGCTGGCTGACGCCCACCCC----CACCTGACCCACC---TGAGCTGGA-CTTCCTCTGAGGGATTTGGGCAAAACATGAGACTGTC-CCATCTTCCTTCAT-TAGGACCC--------------AGGTGA-----------TC-TTTCATGGGCAGGCTCCCCTGCACCCACATTGCGGGGCACA-TTTGGCCAAGACCAGAAAAAAA--- i calJac3.chrUn_GL286409 C 0 I 2 s mm10.chr11 75901115 266 + 122082543 --------------------AGCAAGAAACAGA---TCCTTAGAGCAAAATGGTCTGGAGCCC-GTGGCAGGAGAG---------ATCAGG-GATGGACCAGCCCCTGCCCTACAGTTTTCTCCAATGCTGGGCTGGGGCCATAATGCCCC----CA------------------CAGAA-CTTTTGCTAAGGGCCTGGAGAAAACTGTGGGCTAACCTCAGCCCCTCTGCTTCTAGGACTC--------------AGCACACAAGGTCTAAGTTATGTCAG--GCTGCCTCTCCTGGGCCTGCACTATGAGATCCA-TTTGGTTGAGACCAGGAAAAGC--- i mm10.chr11 C 0 I 2 s canFam3.chr9 15726206 285 - 61074082 GTGGGTCTGGGCTGACTTTT-GCAGGACATA---CCACCTCAGAGC--------------CTTGGTGGGGGGCAGGAATCAAGGAATCTGGTTCAGCCATGGTCCCTTCCCT-----------CCATGCTTCCCTAGACCAGGCTAGATCCCTGACA--------ACCCAATGAACTGGA-CTTCCTCTAAGGGCTTTGACCCAAATATAAAGAGTCC-C-----TTTTCCCC-AGGGACTCAGCATACATTATAGAGCCCA-----------CAGCTTCATGGGCAGGCCCCTCTGTGCCCAAACCATGGAACACATTTTGGCTAAGACCAGAAAAAAT--G i canFam3.chr9 C 0 C 0 a score=1267533.000000 s hg38.chr17_GL383563v3_alt 279693 454 + 375691 A--CGACTGCTTCCCTCAAATGGTGACAATG-CATCCC--AGGCTCAGGCGGGCTCTGCTGTGGCCCTGCCCAGCCTCCCCATGGCTAGCTGG---ACTCTCAGTGAGACTCAAAGCTGGCTGACTCAGATCCCAAGCAATTAGGAGCACCAGTCCTCTCTAATTAACCAGCCAGCCCCTCTCCCTTCCCACCAAGGCCCTCAGATAATGAGGGCAGGCAGTCG----------------AGGCATGCAGGCCCAATTACGGAGGG----GACGCAGCTCCGAGGACCGGCATCTCGGCTTCCACCCACAAGCTCATTAGCTTGTAGCTGCTGAACGCTGCCAGGGCTCCTGCTGGGGGCGCGTGTGTGTGCCCAGGAGCACCTGAGGCTCTGTCCTC--CCCAACCATGCCTGGGCCTGGATGCTTCCCACGGCAGGGATCTCCCCAGCATCCCTTCTC--CAGCCTGCCCAAGCCCACACACCT s ponAbe2.chr17 135980 454 + 73212453 AACCGATTGCTTCCCTCAAATGGTAACAATG-CATCCC--AGCCTCAGGCGGGCTCTGCTGTGGCCCTGCCCAGCCTCCCCATCGCTGGCTGG---ACTCTCAATGAGACTCAAAGCTGGCTGACTCAGATCCAAAGCAATTAGGAGCACCAGGCCTCTCTAATTAACCAGCCAGCCCCTCTCCCTCCCCACCATGGCCCTCAGATAATAAGGGCAGGCAGCCG----------------AGGCAAGCAGGCCCAATTACGGAGGG----GACGCAGCTCCGAGGACCAGCATCTCGGCTTCCACCCGCAAGCTCATTAGCTT--AGCTGCTGAATGCTGCCAGGGCTCTTGCTGGGGATGCCTGTGTGTGCCCAGGAGCACCTGAGGCTCTGTCCTC--CCCAACCATGCCTGGGCCTGGATGCTTCCCACGGTGGGGATCTCCCCAGCATCCCTTCTC--CAGCCTGCCCGAGCCCACACACCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 258381 454 - 81552678 AACCGATTGCTTCCCTCAAATGGTGACAATG-CATCCC--AGGCTCAGGCGGGCTCTGCTGTGGCCCTGCCCAGCCTCCCCATCGCTGGTTGG---ACTCTCAATGAGACTCAAAG-TGGCTGATTCAGATCCCAAGCAATTAGGAGCACCAGGCCTCTCTAATTAACCAGCCAGCCCCTCTCCCTTCCCACCACGGCCCTCAGATAATGAGGGCAGGCAGCCG----------------AGGCAAGCAGGCCCAATTACGGAGGG----GACGCAGCTCCGAGGACCCGCATCTCGGCTTCCACCCGCAAGCTCATTAGCTTGTAG-TGCTGAACGCTGCCAGGGCTCTTGCTGGGGACGCCTCTGTGTGCCCAGGACCACCTGAGGCTCTGTCCTC--CCCAACCATGCCTGGGCCTGGATGCTTCCCACGGCGGGGATCTCCCCAGCATCCCTTCCC--CAGCCTGCCGGAGCCCACACGCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 169310 453 + 80904711 --TCCATCGCTTCCCTCAAACAGTGACAAGG-CATCCC--AGGCTCGGGTGGGCTCTGCTGGGGCCCCGCCCAG-CTCGCCATCGCTGGCTGG---ACTCTCAATGAGACTCAAAGCTGGCTGACTCAGATCCCAAGCAATTAGGAGCACCAGGCCTCTCTAATTAACCAGCCAGCCCCTCTCCCTTCCCACCACGGCCCTCAGATAATGAGGGCAGGCAGCCG----------------AGACACGCAGGCCCCATTACGGAGGG----GACGCAGCGCCCAGGACCGGCATCTCGGCTTCCGCCCGCGAGCTCATTAGCTTGTAGCTGCTGAAAGCTGCCAGGGCTCTTGCTGGGGACGCCTCTGTGAGCCCAGGAGCACCTGAGGCTCTGTCCTC--CCCAACCACGCCTGGGCCTGGATGCTTCCCACGGCGGGGATCTCCCCAGCATCCCTTCTC--CAGCCTGCCTGAGCCCACACACCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 174953 453 + 80997621 --CCCATCGCTTCCCTCAAACAGTGACAAGG-CATCCC--AGGCTCGGGTGGGCTCTGCTGGGGCCCCGCCCAG-CTCGCCATCGCTGGCTGG---ACTCTCAATGAGACTCAAAGCTGGCTGACTCAGATCCCAAGCAATTAGGAGCACCAGGCCTCTCTAATTAACCAGCCAGCCCCTCTCCCTTCCCACCACGGCCCTCAGATAATGAGGGCAGGCAGCCG----------------AGACACGCAGGCCCCATTACGGAGGG----GACGCAGCGCCCAGGACCGGCATCTCGGCTTCCGCCCGCGAGCTCATTAGCTTGTAGCTGCTGAAAGCTGCCAGGGCTCTTGCTGGGGACGCCTCTGTGAGCCCAGGAGCACCTGAGGCTCTGTCCTC--CCCAACCACGCCTGGGCCTGGATGCTTCCCACGGCGGGGATCTCCCCAGCATCCCTTCTC--CAGCCTGCCTGAGCCCACACACCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168526 452 + 74645514 --CCCATCGCTTCCCTCAAACAGTGACAAGG-CATCCC--AGGCTCAGGTGGGCTCTGCTGTGGCCCCGCCCAG-CTCCCCATCGCTGGCTGG---ACTCTCAATGAGACTCAAAGCTGGCTGACTCAGATCCCAAGCAATTAGGAGCACCAGGCCTCTCTAATGAACCAGccagcccctctcccttcccaccaCGGCCCTCAGATAATGAGGGCAGGCAGCCA----------------AGACA-GGAGGCCCAATTACGGAGGG----GACGCAGCGCCCAGGACCGGCATCTCGGCTTCCGCCTGCGAGCTCATTAGCTTGTAGCTGCTGAACGCTGCCAGGGCTCTTGCTGGGGACGCCTCTGTGTGTCCAGGAGCACCTGAGGCTCTGTCCTC--CCCAACCATGCCTGGGCCTGGATGCTTCCCACGGCGGGGATCTCCCCAGCATCCCTTCTC--CAGCCTGCCTGAGCCCACACACCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 158756 453 + 75148670 --ACCATCGCTTCCCTCAAACAGTGACAAGG-CATCCC--AGGCTCAGGTGGGCTCTGCTGGGGCCCCACTCAG-CTCCCCATCGCTGGCTGG---ACTCTCAATGAGACTCAAAGCTGGCTGACTCAGATCCCAAGCAATTAGGAGCACCAGGCCTCTCTAATTAACCAGCCAGCCCCTCTCCCTTCCCACCACGGTCCTCAGATAATGAGGGCAGGCAGCCG----------------AGACACGCAGGCCCAATTACGGAGGG----GACGCAGCGCCCAGGACTGGCATCTCGGCTTCCGCCCGAGAGCTCATTAGCTTGTAGCTGCTGAACGCTGCCAGAGCTCTTGCTGGGGACGCCTCTGTGTGCCCAGGAGCACCTGAGGCTCTGTCCTC--CCCAACCACGCCTGGGCCTGGATGCTTCCCACGGCGGGGATCTCCCCAGCATCCCTTCTC--CAGCCTGCCTGAGCCCACACACCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 973727 423 - 1291538 ---CAACTGCTTCCCTCAAAGGGTGATGATT-CCTCCC--AGGCTCCGGCGGGCCTTGCT-----------CAG-CCTCCCAGTGCTGGCTGG---ACTCTGGATGATGCTGAAAGCGGGCTGACTCTGATCCCAAGCAATCAGAGGCACCAGGCCTCTCTAATTAAGCATGCAGCCCCTCTCCCTTCCCACCACAGCCCTCAGATAAAGAGGGCAGGCAGCCG----------------AGGCC-GCAGGCCCAATTACAGAGGG----GACACAGTGAGGAGCAACACAGCAGCGACTTCCACTCTCGAGCTCATTA----------GCTGACGGCTGCCAGGCCTCTCGCTGGGGACGCCTCTATACACCCAGGAGCACTGGAGGCTCTGTC--C--CCCGACCTTGCCTGGGCCTGGACACTTCCTATGGTGGGGATCTCCCCAGCACCCCTTCTC--CAGCCTGCCTGAGCCCTCA----- i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75901383 446 + 122082543 ---CAACTGCTTCCTTAGACTGGTGACAGTG-CTGTCCTGGGGCTCAGATGGTC-ATCCTGCAACCGGGCACAG-CCTCCCATGGCTG----------------CGAAGCT----GCTGGCTGACTTGGATCGGAGGCAATTAGAAGTACCAGGCCTCTTTAATTAACCAGTCAGCTCCTCTCCCTTTTCACTACTGCC--AGGGAAACGAGGCCAGGCAGCCGGAGTGTGTGTGTGTGTATGCACGCAGACCCAATTACAGA-GG----GCCACAGCTCC-AGGACTGCAGT---GCCTTCTACCTGCATGTTCATTAGCTTGTGGCTGACAGACACTGGCAGGGATCTTGCTGGAGGGACATTGGTGTCCCCAGGAGCACCTGAGGATTTGTCCACCACCCACACAGGTCT-GGCTTGGACCCTTCCAATGCCAAGGGTCTTCCCAGTATCCTCTCTCTGCAGCCTGTTTAAA--CATACACCT i mm10.chr11 I 2 C 0 s canFam3.chr9 15726491 436 - 61074082 ---CAATTGCTTCCCCTGCATAGTGACAGTGCCATCTG--GGGCTCAGGCTGGTTCTCCTGCAGCCTTGTCTGG-CTCCCCATGGTTGGTGGAAACACTCTCAATCAAACCAAAGGCTGGCTGACTCAGCTTCTAAGCAATCAGAAGCACCAGGCCTCTCTAATTAACCAGCCAGCCCCTTTCCCTTCCCACCACGGCCCTC-GATAATGAGGGCTGGCAGCCT----------------GGGCGTGCAGGCCCAATTACAGAGGGGACAGACGTGGCATCAAGGACTGGCATCACAGGCTCTACTGGCACACTCATTAGCTTATG---GCTAAATAC-ACCAAGGCTCTTGCTGGGGACAGCTCCATGTGGCCAAGAGCACCTGAG----------C--CTTA----------GATCTAGATGCATCCCATGTCAGAGATCT-CCCAGTATCCCCTCTCTGCAGCCTGCCCCTACATGCACACCT i canFam3.chr9 C 0 C 0 e panTro4.chr17 256354 1679 + 82630442 M a score=639165.000000 s hg38.chr17_GL383563v3_alt 280147 304 + 375691 CCCAGGGCCCCAGGCTGCAGCCATCCGCAGAAGGTGAGGAGGCGGAATGTGGAGATGGAGATAAACA-GGGAGGTGGCCCAGAAACCGGCAGTCCCAGAGTGGAGGGCCC----GATTCCTC-----------ACACCGTGTTAGAGCCCTTCCAGCCCCCCAGGGCTGCCGCCTTAACCCCATTCCCAGCTGTAATTAATTA--CCCTTAATGGTTTCACGCCTCCC----TCCGGAGCACTGGGATCCGCA---TGGCTCC------TGACACCAG------------TCGGTGTGCGATAAATATTTGTGGGATAA-GGAAGGGATGGCATCGTCTCTC--CTCCCA s ponAbe2.chr17 136434 307 + 73212453 CCCAGGGCCCTGGGCTGCAGCCGTCCACAGAAGGTGAGGAGGCGGAATGTGGAGATGGAGATAAACA-GGGAGGTGGCCCAGAAACCGGCAGTCCCAGAGGGGAGGGCCC----ATTTCCTC-----------ACACAGTGTTAGAACCCTTCCAGGCCTCCAGGGCTACCGCCTTAACCCCAACCCCAGCTGTAATTAATTA--CCTTTAATGGTCTCACACCTCCC----TCCCAAGCACTGGGATCCGCATGGTGGCTCC------TGACACCAG------------TCGGTGTGCGATAAATATTTGTGGGATAA-GGAAGGGATGGCGTCGTCTCTC--CTCCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 258835 304 - 81552678 CCCAGGACCCCGGGCTGCAGCCGTCCGCACAAGGTGAGGAGGCAGAATGTGGAGATGGAGACAAACA-GGGAGGTGGCCCAGAAACCGGCAGTCCCAGAGTGGAGGGCCC----GATTCCTC-----------ACACTGTGTTCGCGCCCTTCCAGTCCCCCAGGGCTGCCGCCTGAACCCCAACCCCAGCTGTAATTAAGTA--CCCTTAATGGTTTCACACCTCCC----TCCCGAGCACTGGGGTCCGCA---TGGCTCC------TGACACCAG------------TCGGTGTGCGACCAATACTTGTGGGATAA-GGAAAGGATGGCTTCGTCTCTC--CTCCCA i nomLeu3.chr19 C 0 M 516 s rheMac3.chr16 169763 306 + 80904711 CCCAGGGCCCCGGGCTGCAGCCGTCCGCAGAAGGTGCGGAGGCGGAATGTGGAGATGGAAATAAACA-GGGAGGTGCCCCAGAAGCCGGCAGGCCCAGAGTGCAGGGCCC----G-TTCCCT-----------GCACCGTGTT-GAGCCCTCCCAGCCCCCCAGGGCTGCCGGCTTAACCCCAACCCCAGCTGTAATTAATTA--CCCATGATGGTTTCACACCTCCCCCGCCCCCCAGCACTGGGATCTGCC---TGGCTCC------TAACACCAG------------CAGGTGTGCGATAAATATTCATGGGATGG-GGAACGGATGGCATTGTCTCTC--CTCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175406 306 + 80997621 CCCAGGGCCCCGGGCTGCAGCCGTCCGCAGAAGGTGCGGAGGCGGAATGTGGAGATGGAAATAAACA-GGGAGGTGCCCCAGAAGCCGGCAGGCCCAGAGTGCAGGGCCC----G-TTCCCT-----------GCACCGTGTT-GAGCCCTCCCAGCCCCCCAGGGCTGCCGGCTTAACCCCAACCCCAGCTGTAATTAATTA--CCCATGATGGTTTCACACCTCCCCCGCCCCCCAGCACTGGGATCTGCC---TGGCTCC------TGACACCAG------------CAGGTGTGCGATAAATATTCATGGGATGG-GGAACGGATGGCATTGTCTCTC--CTCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 168978 305 + 74645514 CCCAGGGCCCCGGGCTGCAGCCGTCCACAGAAGGTGCGGAGGCGGAATGTGGAGATGGAAATAAACA-GGGAGGTGCCCCAGAAGCCGGCAGGCCCAGAGTGGAGGG-CC----G-TTCCCT-----------GCACCGTGTT-GAGCCCTCCCAGCCCCCCAGGGCTGCCGGCTTAACCCCAACCCCAGCTGTAATTAATTA--CCCATGATGGTTTCACACCTCCCCCGGCCCCCAGCACTGGGATCTGCC---TGGCTCC------TGACACCAG------------CAGGTGTGTGATAAATATTCATGGGATGA-GGAACGGATGGCATTGTCTCTC--CTCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159209 306 + 75148670 CCCAGGGCCGCGGGCTGCAGCCATCCGCAGAAGGTGCGGAGGCGGAATGTGGAGATGGAGATAAACA-GGGAGGTGCCCCAGACACCGGCAGGCCCAGAATGGAGGGCCC----GATTCCCT-----------GCACCGTGTT-GAGCCCTCCCAGCCCCCCAGGGCTGTCGTCTTAACCCCAACCCCAGCTGTAATTAATTA--CCCATGATGGTTTCACACCtcccctg-cccccagcactgggatctgcc---tggctcc------tgacaccag------------taggtgtgcgataaatattcatggaatgG-GGAACGGATGGCATTGTCTCTC--CTCCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974150 273 - 1291538 --------------CTGCAGCCCCCTGCAGAGGGTGAGGAGGTGCAGCGTGGTGATGGAGATAAATA-GGGAGGTG-CCCTGAAGCTAGCAGGCCCCATGTGGAGGGCCCCT--GATGTCCC-----------ACACCATGTGAGAGCCCCCCTAG----------------------CCCCAACCCCAACTATAATGAACCACCCCCATCCTGGTTTAACACCTCTC----TCCGGAGCACTGGGATCTGCA---TGGCTCC------CGATGCCAGGTCC--------CCAGTGCCTGAT--ACCACAGTTGGACGA-GAAATGGATGGCATCGTCTCTC--CTCCCA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15726927 332 - 61074082 CCCAGCACCCAGGGCTCCAG------GCAAAAGGGAAGGAGGTGGAAGGTGGACATGGAGATAAACAGGGGAAGCTCCTCAGAAATTGGTGAGCCCAGAGTAGAGGGTTCCTGAGGTACCCCCACTAGGTCCAGTGCCCTGTT-AGACTCTCTCAG-CCCCCAGGGCTGCCTCAGTAACCCCAATTACAACTGTAATTAATTA--TCCACAACCATTTAACA-CTCCC----CTCTCagagcaggggtctgtg---tgtctttacgctgtattcccagggcttgcaaacacagacctacaataaatacttgctggatgactgaatGGAGGCCACTGTCCCTCCACTCCCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e panTro4.chr17 256354 1679 + 82630442 M a score=129050.000000 s hg38.chr17_GL383563v3_alt 280451 81 + 375691 GACACGAGAGAGCCCTGCAGGGGCAAGGGCTTCGCAGGGGCTATGTCTGGGCCT---CCCTGATTCTCCAGCGACTCGGGTTCT s ponAbe2.chr17 136741 81 + 73212453 GACATGAGAGAGCCCTGCAGGGCCAAGGGCTTCACAGGGGCTATGTCTGGGCCT---CCCTGATCCTCCAGCAACTCAGGTTCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 170069 81 + 80904711 GACATCAGAGAGCCCTGCAGGGACGAGGGCTTCGCAGGGGCTATGTGTGGGCCT---CCCTGCGTCTCCAGTGACTCGGGTTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175712 81 + 80997621 GACATCAGAGAGCCCTGCAGGGACGAGGGCTTCGCAGGGGCTGTGTGTGGGCCT---CCCTGCGTCTCCAGTGACTCGGGTTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 169283 81 + 74645514 GACATCAGAGAGCCCTGCAGGGACGAGGGCTTCGCAGGGGCTATGTCTGGGCCT---CCCTGCATCTCCAGTGACTCGGGTTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159515 81 + 75148670 GACATCAGAGAGCCCTGCAGGGACGAGGGCTTCACAGGGGCTATGTCTGGGCCT---CCCTGCATCTCCAGTGACTCAGGTTCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974423 64 - 1291538 GATGCCAGAGAGCCCTG-----------------CAGGGGTCATGTCTGGGCCT---CCCTGATTCTGCGGTGGCTCAGGTTCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15727259 66 - 61074082 GATGTTCTGAAGGGCTGTA------------------AGGTTAAGTCTGGGCCTTGCTCCTGACTCTTCTGGGACTTGGCTCCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e nomLeu3.chr19 259139 516 - 81552678 M e panTro4.chr17 256354 1679 + 82630442 M a score=153210.000000 s hg38.chr17_GL383563v3_alt 280532 72 + 375691 AGGCCACCA-CCCCCT-ACAGCAGGGCCCCCAGGGGGGCAGTGCCTCTGCGATCATCTCCCTGGAGTCCCAGGC s ponAbe2.chr17 136822 72 + 73212453 AGGCGACCA-CCCGCT-ACAGCAGGGCCCCCAGGGGGGCAGTGCCTCTGCGATCATCTCCCTGGAGTCCCAGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259655 71 - 81552678 AGGCCACCA-CTC-CT-ACAGCAGGGCCCCCGGGGGGGCAGTGCCTCTGGGATCATCTCCCTGGAGTCCCAGGC i nomLeu3.chr19 M 516 C 0 s rheMac3.chr16 170150 71 + 80904711 AGGCAACCA-CCC-CT-ACAGCAGGGCCCCCAGGGGGTCAGTGCCTCTGCGATCATCTCCCTGGGGTCCCAAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175793 71 + 80997621 AGGCAACCA-CCC-CT-ACAGCAGGGCCCCCAGGGGGTCAGTGCCTCTGCGATCATCTCCCTGGGGTCCCAAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 169364 71 + 74645514 AGGCAACCA-CCC-CT-ACAGCAGGGCCCCCAGGGGGTCAGTGTCTCTGCGATCATCTCCCTGGGGTCCCAAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159596 72 + 75148670 AGGCAACCACCCC-CT-ACAGCAGGGCCCCCAGGGGGTCAGTGCCTCTGCGATCATCTCCCTGGGGTCCCAAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974487 70 - 1291538 AGGTAACCA-CCC-CTCACAGCAGGGATCCCGGGGGGTCAGTGA--CTGCAATTCTCTCCCTGGAGTCCCAGGC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15727325 54 - 61074082 AAGTGACCA-CCATCT-GATAGAATGACCCCAGGGGATTTGT----CTG----CATCTCTTTGA---------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e panTro4.chr17 256354 1679 + 82630442 M a score=50675.000000 s hg38.chr17_GL383563v3_alt 280604 30 + 375691 CCTCCACACCTGCCCATTCACTGCTCAAAC s nomLeu3.chr19 259726 30 - 81552678 CCTCTGCACCTGCCCATTCACTGCTCAAAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170221 30 + 80904711 CTTCTGCACCTGCCCATTCACTGCTCAAAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175864 30 + 80997621 CTTCTGCACCTGCCCATTCACTGCTCAAAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 169435 30 + 74645514 CTTCTGCACCTGCCCATTCACTGCTCAAAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159668 30 + 75148670 CTTCTGCACCTGCCCATTCACTGCTCAAAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974557 30 - 1291538 CCAATACATCTGCCCGTTCACTGCTTAAAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e canFam3.chr9 15727379 0 - 61074082 C e ponAbe2.chr17 136894 0 + 73212453 C e panTro4.chr17 256354 1679 + 82630442 M a score=3910.000000 s hg38.chr17_GL383563v3_alt 280634 4 + 375691 GCAG s nomLeu3.chr19 259756 4 - 81552678 GCAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 175894 4 + 80997621 GCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 169465 4 + 74645514 GCAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974587 4 - 1291538 GCAG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e canFam3.chr9 15727379 0 - 61074082 C e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e ponAbe2.chr17 136894 0 + 73212453 C e panTro4.chr17 256354 1679 + 82630442 M a score=5311.000000 s hg38.chr17_GL383563v3_alt 280638 20 + 375691 TTCATCTCCCGAAAGACTCC s nomLeu3.chr19 259760 19 - 81552678 CTCATC-CCGGAAAGACCCC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 169469 20 + 74645514 CTGGTCCTCCGAAAGACTCC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974591 20 - 1291538 CTTGTCCCCTGAAAGACTCC i calJac3.chrUn_GL286409 C 0 T 50 s canFam3.chr9 15727379 16 - 61074082 -CTATTTCCTGGTGGAC--- i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e macFas5.chr16 175898 0 + 80997621 C e ponAbe2.chr17 136894 0 + 73212453 C e panTro4.chr17 256354 1679 + 82630442 M a score=329.000000 s hg38.chr17_GL383563v3_alt 280658 2 + 375691 CC s nomLeu3.chr19 259779 2 - 81552678 TC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 169489 2 + 74645514 TC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e canFam3.chr9 15727395 0 - 61074082 C e calJac3.chrUn_GL286409 974611 50 - 1291538 T e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e macFas5.chr16 175898 0 + 80997621 C e ponAbe2.chr17 136894 0 + 73212453 C e panTro4.chr17 256354 1679 + 82630442 M a score=12250.000000 s hg38.chr17_GL383563v3_alt 280660 30 + 375691 TGCACCTGCCCATTCACTGCTCAAATGCAG s nomLeu3.chr19 259781 30 - 81552678 TGCACCTGCCCATTCACTGCTCAAATGCAG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 169491 30 + 74645514 TGCACCTGCCCATTCACTGCTGAAATGCAG i papAnu2.chr16 C 0 T 52 s calJac3.chrUn_GL286409 974561 30 - 1291538 TACATCTGCCCGTTCACTGCTTAAATGCAG i calJac3.chrUn_GL286409 T 50 C 0 s canFam3.chr9 15727395 7 - 61074082 ---------------------CTAATGC-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e macFas5.chr16 175898 0 + 80997621 C e ponAbe2.chr17 136894 0 + 73212453 C e panTro4.chr17 256354 1679 + 82630442 M a score=8204.000000 s hg38.chr17_GL383563v3_alt 280690 18 + 375691 CTCGTCCCCTGAAAGACT s nomLeu3.chr19 259811 18 - 81552678 CTCGTCCCCCGAAGGACT i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 169469 18 + 74645514 CTGGTCCTCCGAAAGACT i papAnu2.chr16 T 52 C 0 s calJac3.chrUn_GL286409 974591 18 - 1291538 CTTGTCCCCTGAAAGACT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e canFam3.chr9 15727402 0 - 61074082 C e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e macFas5.chr16 175898 0 + 80997621 C e ponAbe2.chr17 136894 0 + 73212453 C e panTro4.chr17 256354 1679 + 82630442 M a score=3000.000000 s hg38.chr17_GL383563v3_alt 280708 2 + 375691 CC s ponAbe2.chr17 136894 2 + 73212453 CC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259829 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 169487 2 + 74645514 CC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974609 2 - 1291538 CC i calJac3.chrUn_GL286409 C 0 T 50 s canFam3.chr9 15727402 2 - 61074082 CC i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e macFas5.chr16 175898 0 + 80997621 C e panTro4.chr17 256354 1679 + 82630442 M a score=566.000000 s hg38.chr17_GL383563v3_alt 280710 2 + 375691 TC s ponAbe2.chr17 136896 2 + 73212453 TC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259831 2 - 81552678 CC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 169489 2 + 74645514 TC i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15727404 2 - 61074082 TA i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e calJac3.chrUn_GL286409 974611 50 - 1291538 T e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e macFas5.chr16 175898 0 + 80997621 C e panTro4.chr17 256354 1679 + 82630442 M a score=28250.000000 s hg38.chr17_GL383563v3_alt 280712 26 + 375691 TACACCTGCCCATTCACTGCTCAAAT s ponAbe2.chr17 136898 26 + 73212453 TACACCTGCCCATTCACTGCTCAAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259833 26 - 81552678 TGCACCTGCCCATTCACTGCTCAAAT i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 169491 26 + 74645514 TGCACCTGCCCATTCACTGCTGAAAT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974561 26 - 1291538 TACATCTGCCCGTTCACTGCTTAAAT i calJac3.chrUn_GL286409 T 50 C 0 s canFam3.chr9 15727406 24 - 61074082 TAGACCTGCCCACT--CTGCTCAAAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e chlSab2.chr16 159698 0 + 75148670 C e rheMac3.chr16 170251 0 + 80904711 C e macFas5.chr16 175898 0 + 80997621 C e panTro4.chr17 256354 1679 + 82630442 M a score=10948.000000 s hg38.chr17_GL383563v3_alt 280738 4 + 375691 GCAG s ponAbe2.chr17 136924 4 + 73212453 GCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259859 4 - 81552678 GCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170251 4 + 80904711 GCAG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 169517 4 + 74645514 GCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159698 4 + 75148670 GCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974587 4 - 1291538 GCAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15727430 4 - 61074082 GCAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e macFas5.chr16 175898 0 + 80997621 C e panTro4.chr17 256354 1679 + 82630442 M a score=41899.000000 s hg38.chr17_GL383563v3_alt 280742 20 + 375691 CTCGTCCCCTGAAAGACTCC s ponAbe2.chr17 136928 20 + 73212453 CTCATCCCCAGAAAGACTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259863 19 - 81552678 CTCGT-CCCAGAAAGACTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170255 20 + 80904711 CTGGTCCTCCGAAAGACTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175898 20 + 80997621 CTGGTCCTCCGAAAGACTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 169521 20 + 74645514 CTGGTCCTCCGAAAGACTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159702 20 + 75148670 CTGGTCCTCCGAAAGACTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974591 20 - 1291538 CTTGTCCCCTGAAAGACTCC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15727434 20 - 61074082 CTTGGTCCTCAAATAACTCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e panTro4.chr17 256354 1679 + 82630442 M a score=18653.000000 s hg38.chr17_GL383563v3_alt 280762 9 + 375691 ACCCTCTTA s ponAbe2.chr17 136948 9 + 73212453 ACCCTCTTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259882 9 - 81552678 ACCCTCTTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170275 9 + 80904711 ACCCTCTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175918 9 + 80997621 ACCCTCTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 169541 9 + 74645514 ACCCTCTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159722 9 + 75148670 ACCCTCTCA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15727454 9 - 61074082 TCCTTCTAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e calJac3.chrUn_GL286409 974611 0 - 1291538 C e panTro4.chr17 256354 1679 + 82630442 M a score=33082.000000 s hg38.chr17_GL383563v3_alt 280771 14 + 375691 CAAGTCCCCTACAG s ponAbe2.chr17 136957 14 + 73212453 CAAGTCCCCTACAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259891 14 - 81552678 CAAGTCCCCTACAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170284 14 + 80904711 CAAGTCACCTACAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175927 14 + 80997621 CAAGTCACCTACAG i macFas5.chr16 C 0 I 3 s papAnu2.chr16 169550 14 + 74645514 CAAGTCACCTACAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159731 14 + 75148670 CAAGTCACCTACAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974611 14 - 1291538 CAAGTCCCCTACAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15727463 10 - 61074082 CAACCCCCTT---- i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e panTro4.chr17 256354 1679 + 82630442 M a score=8148.000000 s hg38.chr17_GL383563v3_alt 280785 3 + 375691 CTC s ponAbe2.chr17 136971 3 + 73212453 CTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259905 3 - 81552678 CTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170298 3 + 80904711 CTC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 169564 3 + 74645514 CTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159745 3 + 75148670 CTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974625 3 - 1291538 CTC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15727473 3 - 61074082 CTC i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e macFas5.chr16 175941 3 + 80997621 I e panTro4.chr17 256354 1679 + 82630442 M a score=660731.000000 s hg38.chr17_GL383563v3_alt 280788 288 + 375691 AGCGTCCCAAAGATCTCAGCTCTGCCCTCTGTTTTCAGGTCCCCAGGATCTCAGCCTTGGAGGCAGCTGGAGCATGCCCCGTCCCTCCTCCTCGGTCCACTGTTCCTAAGTCGAATCTGCCATTGCATCCTGTGTTCCTTTTTCCTTCAGCACACGCCTCTGTGCT-CCCCAGGCAT-CATCCTCACAGTTGAGCACTTGCCCAGCCC-----GTTTCCAGCTTCCGGCCTCAGCCTGTGTGGTCTTCCCCTCCCCGGATGCCCTTCCCTCTGCCCTCAGCCTTTCAGAAACCTG s ponAbe2.chr17 136974 288 + 73212453 AGCGTCCCAAAGATCTCAGCTCTGCCCTGTGTTTTCAGGTCCCCAGGATCTCAGCCTTGGAGGCAGCTGGAGCATGCCCCGTCCCTCCTCCTCGGTCCACTGTTCCTAAGTCAAATCTGCCATTGCATCCTGCGTTCCTTTTTCCTTCAGCACACGCCTCTGTGCT-CCCCAGGCAT-CATCCTCACAGTTGAGCGCTTGCCCAGCCC-----GTTTCCAGCTTCCAGCCTCAGCCTGGATGCCCTTCCCCTCCCCGGATGCCCTTCCCTCTCCCCTCAGCCTTGCAGAAACCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 259908 288 - 81552678 AGCGTCCCAAAGATCTCAGCTCTGCCCTGTGTTTTCAGGTCCCCAGGATCTCAGCCTTGGAGGCAGCTGGAGCGTGCCCCGTCCCTCCTCCATGGTCCACTGTTCCTAAGTCGAATCTGCCAATGCATCCTGCGTTCCTTTTTCCTCCAGCACACGCCTCTGTGCT-CCCCAGGCAT-CATCCTCACAGCTGGGCGCTTGCCCAGCCC-----GTTTCCAGCTTCCAGCCTCAGCCTGTGTGGTCTTCCCCTCCCTGGATGCCCTTCCCTCTGCCCTCAGCCTTGCAGAAACCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170301 288 + 80904711 AGCGTCCCCAGGATCTCAGCTCTGCCCTGGGTTTGCAGGTCCCCAAGATCTCAGCCTCAGAGGCAGCGGGAGCAGGCCCCATCCCTCCTCCACCGTCCACTGTCCCTAAGTCGAATCTGCCATTGCATCCTGTGCTCCTTTTCCGTTCCGCACATGCCTCTGTGCTCCCCCAGGCAT-CATCCTCACAGCTGGACGCTCGCCCAGCCT-----GTTTCCAGCTTCGAGCCTCGGCCCGTGTGGTCTTCCCCTCCCC-GATGCCCTTCCCTCTGCCCTCAGCCTTGCAGAAGTCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 175944 288 + 80997621 AGCGTCCCCAGGATCTCAGCTCTGCCCTGGGTTTGCAGGTCCCCAAGATCTCAGCCTCAGAGGCAGCGGGAGCAGGCCCCATCCCTCCTCCACCGTCCACTGTCCCTAAGTCGAATCTGCCATTGCATCCTGTGCTCCTTTTCCCTTCCGCACACGCCTCTGTGCTCCCCCAGGCAT-CATCCTCACAGCTGGACGCTCGCCCAGCCT-----GTTTCCAGCTTCGAGCCTCGGCCCGTGTGGtcttcccctcccc-gatgcccttccctctgccctcagccTTGCAGAAGTCTG i macFas5.chr16 I 3 C 0 s papAnu2.chr16 169567 280 + 74645514 AGCGTCCCAAGGATCTCAGCTCTGCCCTGGGTTTGCAG--------GATCTCAGCCTCAGAGGCAGCGGGAGCAGGCCCCATCCCTCCTCCACCGTCCACTGTCCCTAAGTCGAATCTGCCATTGCGTCCTGTGCTCCTTTTCCCTTCCGCACACGCCTCTGTGCTCCCCCAGGCAT-CATCCTCACAGCTGGACGCTTGCCCAGCCT-----GTTTCCAGCTTCGAGCCTCGGCCTATGTGGTCTTCCCCTCCCC-GAtgcccttccctctgccctcaGCCTTGCAGAAGTCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 159748 289 + 75148670 AGTGTCCCGAAGATCTCAGCTCTGCCCTGGGTTTGCAGGTCCCCAGGATCTCAGCCTCAGAGGCAGCTGGAGCAGGCCCCATCCCTCCTCCACCGTCCACTGTCCCTAAGTCAAATCTGCCATTGCATCTTGTGCTCCTTTTCCCTTCAGCACACGCCTCTGTGCTCCCCCGGGCAT-CATCCTCACAGCTGGACGCTCGCCCAGCCT-----GTTTCCAGCTTTGAGCCTCGGCCTATGTGGTCTTCCCCTCCCCGGATGTCCTTCCCTCTGCCCTCAGTCTTGCAGAAGTCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 974628 277 - 1291538 AGCGTTCCAAAGATTCCAGTTCTGCCCTGCGTTTTCAGGACTGGGGGTGCTCAGCCTTGGAGGCAGCTGGAGCACGCCCC-TCCCTCCTCCAAGGT-CACTATTCCCCAGTCAGA------------TCCTGTGTTGCTTTTTCCTCCAGCACACGCCTCTGCC---TCGCGGGCAC-CTCCCTCGCAATCAGGCGCTTGCCCAGCTCAGCCAGtttccagcttccagccttggcctatgtgttcttcccctccgcagatgcccttccctctgccctcagccttgcagaagcctg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15727476 252 - 61074082 --CTTCCCAAAGATCTCAGCTCTGCCCCAGGCCTTCCAGTCCCCAGGATCT-----------------------TGCCCTGCCCCTCCCCCAAGGTTC-CTGTTCCCAAGTCAAATCTGATGCCTTCTCCTGGGTCCTTCCTTCTTTCAGCCCCCTTCTACTTGCC-CTCAGGGCCTACATCCTCACTGACAGGTCCCTGCCCAGCCT-----GTTTCCTGCTCTGTGC-----------TGTCCTTCCCTCCTCCAAACACCCTTTGTGCTACTCTCAGCCTCTCAGAAGCCCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75901829 0 + 122082543 C e panTro4.chr17 256354 1679 + 82630442 M a score=541557.000000 s hg38.chr17_GL383563v3_alt 281076 206 + 375691 CCCAGCCTCCAGGGGCCCACTCCTCCAGGCAGCCCTCCTGGCTGCTCTGAGTCCTGGGAACCCCAGTCCCAACCACAGTGCACTTCACACTAGAGAATA---CTGTCTGCCCATCTTGACGGTCAGGACGTGAGGGAAGCGATTATTCTGAAAACCTCTCTTTTTGGATCCCCCCAACCCAGGATTGGCTCACAATGGGCGAAGCGATC s ponAbe2.chr17 137262 202 + 73212453 CCCAGCCTCCAGAGGCCCACTCCTCCAGGCAGCCCTCCTGGCTGCTCTGAGTCCTGGGAACCCCAGTCCCAACCACGGTGCACGTCACACTAGAGAATA---CTGTCTGCCCATCTTGACCTTCAGGACGTGAGGGAAGCAACCATTCTGAACAC----CTTTTTGGATCCCCCTAACCCAGGATTGGCACACAATGGGCGAAGCGATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 260196 206 - 81552678 CCCAGCCTCCAGGGGCCCACTCCTCCAGGCAGCCCTCCTGGCTGCTCTGAGTCCTGGGAACCCCAGTCCCAACCACGGTGCATGTCACACTAGAGAATA---CTGTCCGCCCATCTTGACCGTCAGGACATGAGGGAAGCGACCATTCTGAACATCTCTCTTTTTGGATCCCTCTAACCCAGGATTGGCACACAATGGGCGAAGCGATT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170589 209 + 80904711 CCCAGCCTCCAGGGGTCCACTCCTCCAGGCAGCCCTCCTGGCTGCTTTGAGTCCTGGGAACCCCAGTCCCAGCCACAGTGCACGTCACACTAGAGAATACCGCCGTCGGCCCATCGTGACCGTCAGGACCTAAGGGAAGTGACCACCCTGAACACCTCTCTTTTTGGATCCCCCAAACCCAGGATTGGCACACAATAGGCTAAGCGACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 176232 209 + 80997621 CCCAGCCTCCAGGGGTCCACTCCTCCAGGCAGCCCTCCTGGCTGCTTTGAGTCCTGGGAACCCCAGTCCCAGCCACAGTGCACGTCACACTAGAGAATACCGCCGTCGGCCCATCGTGACCGTCAGGACCTGAGGGAAGCGACCACCCTGAACACCTCTCTTTTTGGATCCCCCAAACCCAGGATTGGCACACAATAGGCTAAGCGACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 169847 206 + 74645514 CCCAGCCTCCAGGGGCCCactcctccaggcagccctccTGGCTGCTTTGAGTCCTGGGAACCCCAGTCCCAGCCACA---CGCGTCACGCTAGAGAGTACCACCGTCGGCCCATCGTGACCGTCAGGACCTGAGGGAAGCGACCACCCTGAACACCTCTCTTTTTGGATCCCCCTAACCCAGGATTGGCACACAATACGCTAAGCGACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 160037 197 + 75148670 CCCGGCCTCCAA------------TCTGCCAGCCCTCCTGGCTGCTTTGAGTCCTGGGACCCCCGGTCCCAGCCACAGTGCACGTCACGCTAGAGAGTACCACCGTCGGCCCATCGTGACCGCCAGGACCTGAGGGAAGCAACCACCCTGAACACCTCTCTTTTTGGATCCCCCTAACCCAGGATTGGCACACAACAGGCTAAGCGACT i chlSab2.chr16 C 0 I 20 s calJac3.chrUn_GL286409 974905 206 - 1291538 cctggccttcaggggccccctcctccaggcagccctcctggctgctctgagtcCTGGAAACTCCAGTCCCAGCCATGGTGCACGTCACTCTAGAGAATC---CCATCTGCCCATCATGACCTTGAGGCCATGCGGGAAGAGATCGTTCTGAACACCTCTCTTTTTGGATACCCCTAACCCAGGACTGGCACACAGCAGGCTAAGCGACT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75901829 165 + 122082543 TCTGGTCTTGGGAGACTCGCTCTTCCACACAGCTCTCCGGGTTGC--TAAGTCCTGGGAACCTAGGCCCCTATAGCAGTGGGTGTCACTCTAGAGAATG---TTGCCCATCCACCTTGACAGTCAGGACCTAAGGGAAGAATTC----------CCTCTCTTCTAGATTCCCCTCACCCC----------------------------- i mm10.chr11 C 0 I 1 s canFam3.chr9 15727728 200 - 61074082 CCCAGCTTCCAGGAGCCAGCTCCTACAGGCAGATCTCTCAATTGCTCTCA-TCCTGGAA--CCTGGGTCCAGCCAGGTAGAGTACCACTCTAGAGAATA---CAGT--GCCCACCTTGACCATCCGGACCTGAGGGAAATGACTGTTCTAGACACTTCTCCTTTTGGATTCCCCTAACCCAGAATTAGCCCACAACA-GTTAAGTGACT i canFam3.chr9 C 0 C 0 e panTro4.chr17 256354 1679 + 82630442 M a score=23228.000000 s hg38.chr17_GL383563v3_alt 281282 24 + 375691 AAGAA-AGACAT---TTATACGAGTAAC s ponAbe2.chr17 137464 24 + 73212453 GAGAG-AGACAT---TTATACGAGGAAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 260402 22 - 81552678 GAGAG-AGACAT---TTATACAAGTA-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170798 22 + 80904711 GAGAG-AGACAT---TTACATGAATA-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 176441 24 + 80997621 GAGAG-AGACAT---TTACATGAATAAC i macFas5.chr16 C 0 I 2 s papAnu2.chr16 170053 24 + 74645514 GAGAG-AGACAT---TTACATGAATAAC i papAnu2.chr16 C 0 I 2 s calJac3.chrUn_GL286409 975111 18 - 1291538 GAGTG-AGACAT---TTACGTG------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75901995 21 + 122082543 GAAAG-ACACACAGACTGTGCC------ i mm10.chr11 I 1 C 0 s canFam3.chr9 15727928 25 - 61074082 GAGTGTTAACAT---TTATATGAGGTAC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 160234 20 + 75148670 I e panTro4.chr17 256354 1679 + 82630442 M a score=-4969.000000 s hg38.chr17_GL383563v3_alt 281306 25 + 375691 GAGACAATTATAACGAGACATTTAT s ponAbe2.chr17 137488 25 + 73212453 GAGACAATTATAACGAGACATTTAT i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 975129 4 - 1291538 --------------------CTTA- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902016 16 + 122082543 ---------TGGATGAACCATTGGC i mm10.chr11 C 0 C 0 s canFam3.chr9 15727953 1 - 61074082 ---------------------T--- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 160234 20 + 75148670 I e papAnu2.chr16 170077 2 + 74645514 I e rheMac3.chr16 170820 0 + 80904711 C e macFas5.chr16 176465 2 + 80997621 I e nomLeu3.chr19 260424 0 - 81552678 C e panTro4.chr17 256354 1679 + 82630442 M a score=1784.000000 s hg38.chr17_GL383563v3_alt 281331 4 + 375691 ACGA s ponAbe2.chr17 137513 4 + 73212453 ACGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 260424 4 - 81552678 ACTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170820 4 + 80904711 ACTC i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 160254 4 + 75148670 ACTC i chlSab2.chr16 I 20 C 0 s calJac3.chrUn_GL286409 975133 4 - 1291538 ACCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902032 4 + 122082543 ACCT i mm10.chr11 C 0 C 0 e canFam3.chr9 15727954 0 - 61074082 C e papAnu2.chr16 170077 2 + 74645514 I e macFas5.chr16 176465 2 + 80997621 I e panTro4.chr17 256354 1679 + 82630442 M a score=362195.000000 s hg38.chr17_GL383563v3_alt 281335 171 + 375691 GCACAAAGACTGAGGCGTTTCCCTGCCGGCTCAGGACATCCAGTGCTGGAGAGCTACAAAGGCTTCCAGAGGCTT-------TTATGTAAATTACAGAAAATATGGGACTAGCT---GT-GGGAGCTCCAAT------TTTAAG-----------------------------AAAACA---------------------------------------AGAATTCCAACGAGGAGAATGTGGGt-gctatggactga s ponAbe2.chr17 137517 171 + 73212453 GCACAAACACTGAGGGGTTTCCCTGCCGGCCCAGGACATCCAGTGCTGGAGAGCTACAAAGGCTTCCAGAGGCTT-------TGATGTAAATTACAGAAAATATGGGACGAGCT---GT-GGGAGCCCCAAT------TTTAAG-----------------------------AAAATA---------------------------------------AGAATTCCAACGAGGAGAATGTGGGt-gctatggactga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 260428 171 - 81552678 GTACAAACACTGAGGGGTTTCCCTGCTGGCTCAGGACATCCAGTGCTGCAGAGCTACAAAGGCTTCCAGACGCTT-------TTACGTAAATTACAGAAAATATGGGACTAGCT---GT-GGGAGCTCCAAC------TTTAAG-----------------------------AAAACA---------------------------------------AGAATTCCAACGAGGAGAATGTGGGt-gctatggactga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170824 165 + 80904711 GCACAAACACTGAGGGTTGTCCCTGCTGGCTCAGGACATCCAGT------GAGCTACAAAGGCTTCCTGAGGCTT-------CTATGTAAATTATAGAAAATATGGGACTAACT---GT-GGGAGCTCCAAT------TTTAAG-----------------------------AAAACA---------------------------------------AGAATTCCAGGGAGGAGAATGTGGGt-gctatgaactga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 176467 165 + 80997621 GCACAAACACTGAGGGTTGTCCCTGCTGGCTCAGGACATCCAGT------GAGCTACAAAGGCTTCCAGAGGCTT-------CTATGTAAATTATAGAAAATATGGGACTAACT---GT-GGGAGCTCCAAT------TTTAAG-----------------------------AAAACA---------------------------------------AGAATTCCAGGGAGGAGAATGTGGGt-gctatgaactga i macFas5.chr16 I 2 C 0 s papAnu2.chr16 170079 160 + 74645514 GCACAAACACTGAGGGTTGTCCCTGCTGGCTCAGGACGTCCAGT------GAGCTACAAAGGCTTCCAGAGGCTT-------CTATGTAAATTATAGAAAACATGGGACTAACT---GC-GGGAGCtccaat------tttaag-----------------------------aaaaca---------------------------------------agaattCCAGGGAGGAGAATGTGGGT-GCTA-----TGA i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 160258 165 + 75148670 GCACGAACGCTGAGGGTCGTCCCTGCTGGCTCAGGACATCCAGT------GAGCTACAAAGGCTTCCAGAGGCTT-------TTATGTAAATTCTAGAAAATATGGGACTAACT---GC-GGGAGCTCCAAT------TTTAAG-----------------------------AAAACA---------------------------------------AGAATTTCAGGGAGGAGAATGTGGGt-gctatgaactga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975137 146 - 1291538 GCACAGAAACTGAGGGCT-TCCCTGCCGGCTCAGGA-ATCCAGTGCTG--AAGCTACAAAGGCTTCTGG--GCTT-------TCATGTAAACTAC---------GGGACTA-TT---GT-GGGAGCTCTGTT------TCTAAGTTT--------------------------AAGACA---------------------------------------AAGAT------------AATTGCAGT-GCTGGGGACTGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902036 214 + 122082543 GCACATTCATGGGG------CCCTGCCAGCTCGACA---CCAATATTGA-GAACCGCAAAGGTATCCAAGTCCTTAATTTAGTTACATAACTCTTGGAAAAGAAAAGACTAATTATGGT-GGCAGCTTCAATATGAAGCTCAAG-----------------------------AAAGCACCAGTGCTTccaggcatggtggtacccatctgcaatcccggcattccagaggcagagacagaagc-gct--gaactgg i mm10.chr11 C 0 I 377 s canFam3.chr9 15727954 201 - 61074082 GTACAAAAGCCAAGGCATCTCTCTGTTGGCTCAGGACATCCAATGCTGGAGGGCTAAAAATATATCTGGGAGGTT--------TATATAAATTATCAGAAATATGAGACTAATT---GTGGGGAACTTCAAT------TTTAAGTTCAAGAAAACATGAGTTAAAAAAAAAAGAAAACA---------------------------------------TGAGTTAAAACAAGGAAAATGTGGGGAgttatggactga i canFam3.chr9 C 0 C 0 e panTro4.chr17 256354 1679 + 82630442 M a score=598209.000000 s hg38.chr17_GL383563v3_alt 281506 268 + 375691 actgtgtcccttcaaaattcctatgttgaagccctgacccccagagtgactgtatttggagagaaggtctttaggaggtaattaaggtaaaatgagggtgcaagggtgaggccctaatccgataggactagtgtctttataagaa-aagggagaggccgggtgctgtggctcacgtctgtaatcccagtgctttgggaagcggaggtgggaggattgcttgagggctagttagagaccagcccgggcaacaaagcgataccctgtctct s ponAbe2.chr17 137688 269 + 73212453 actgtgccccctcaaaattcctatgttgaagccctgacccccagagtgactgtatttggagacagggtctttaggaggtaattaaggtaaaatgagggtgcaagggtgaggccctaatccgataggactagtgtctttataagaataagggaGAggccgggtgctgtagctcacgtctgtaatcccagcgctttgggacgcggagctgggaggattgcttgagggctagtttgagaccagcctgggcaacaaagcgataccctgtctct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 260599 266 - 81552678 actgtgtcccctcaaaattcctatattgaagccctgacctccagagtgactgtatttggagagagggtctttaggaggtaattaaggagaaatgagggtgcaagggtgaggccctaacccgacaggactagtgtctttataagaa-aagggagaggccggatgctgtggctcatgtctgtaatcccagcgctttgggaagtggaggtgggaggattgcttgagggctagtttgagaccagcctgggcaacaaagcgatacc--gtctct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 170989 267 + 80904711 actgtgtcccctcaaaattcctatattgaagccgtgacccccagagtgactgtatttggagagagggtc-ttaggaggtaattaaggtaaaatgaggttgcaagggcgaggccctaatccaagaggactcgtgtctttatcagaa-aagtaagaggccgggagccgtggctcacacctgtaatcccagcactttgggaagcggaggtgggagggttgtttgagagctagtttgagaccagcctgggcaacaaagcaataccctgtctct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 176632 267 + 80997621 actgtgtcccctcaaaattcctatattgaagccgtgacccccagagtgactgtatttggagagagggtc-ttaggaggtaattaaggtaaaatgaggttgcaagggcgaggccctaatccaagaggactcgtgtctttatcagaa-aagtaagaggccgggtgctgtggctcacacctgtaatcccagcactttgggaagcggaggtgggagggttgtttgagagctagtttgagaccagcctgggcaacaaagcaataccctgtctct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 170239 268 + 74645514 actgtgtcccctcaaaattcctATATTGAAGCCGTGACCCCCAgagtgactgtatttggagagagggtctttaggaggtaattaaggtaaaatgaggttgCGAGGGtgaggccctaatccaataggactcgTGTCTTTATCAGAA-AAGTaagaggctgggtgctgtggctcacatctgtaatcccggcactttgggaagcggaggtgggagggttgcttgagagctagtttgagaccagcctgggcaacaaagcaataccctgtctct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 160423 251 + 75148670 actgtgtcccctcaaaattcctatattgaagccgtgacccccagagtgactgtatttggagagagggtctttaggaggtgattaaggtaaaatgaggttgcgagggtgaggccctaacccaacaggactcgtgtctttatcagaa-aagtaaga-------------ggctcacatctgtgatcccagcactttgggaagcagaggtgggaggg----ttgagagctagtctgagaccagcctgggcagcaaagcaataccctgtctct i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975283 234 - 1291538 ACTGTGTCCCC--------------------------------AAGGggctgtatttgaagagagggttgttaggaggtaatttaggtaaaatgaggtcacaagggtggggccctaatccaacagaactagtgtcttcataagaa-aaggaAGAGGTTGGGGG-Tgtggctcaggtctgtcatcccagcactgtgagaagctgaggt-ggaggattgcttgagggccagtttgagaccagcctgggcaaaagaccaatgctctatgtct i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15728155 248 - 61074082 attgtagcctctcaaaa-tcaaatattaaagccctaacccccattgtgactgt-cctggagacagtttctgtaggaggtaattaaggttaaatgaggtcataaggctggggccctgatccaggaggcctggtgtccttttataaa-aagagagaggccagagc---tggcttgctgccaca------------tgagaagactagccaggatgggggtttgctagaaagtc---gatcagccgacagtgagaaacaaatttctgttcct i canFam3.chr9 C 0 I 325 e mm10.chr11 75902250 377 + 122082543 I e panTro4.chr17 256354 1679 + 82630442 M a score=18560.000000 s hg38.chr17_GL383563v3_alt 281774 12 + 375691 acaaaaaattaa s ponAbe2.chr17 137957 12 + 73212453 ataaaaacttaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 260865 12 - 81552678 acaaaaagttaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 171256 12 + 80904711 acaaaagattaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 176899 12 + 80997621 acaaaagattaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 170507 12 + 74645514 acaaaagattac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 160674 12 + 75148670 acaaaagattac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975517 12 - 1291538 acaaaatacata i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75902250 377 + 122082543 I e canFam3.chr9 15728403 325 - 61074082 I e panTro4.chr17 256354 1679 + 82630442 M a score=361396.000000 s hg38.chr17_GL383563v3_alt 281786 134 + 375691 aaattagacaggcgtggtggcacacatctgtagtctcagctgcccgggaagctggggtgggaagattgcaggaccccagcagttgaaggctgcagtgaacaatgatcatgccactgcactccagcctgggtgac s panTro4.chr17 258044 131 + 82630442 AAATTAGACAg-cgtggtggcacacatctgta-tctcagct-cccgggaagctggggcgggaagattgcagacccccaggagttggaggctgcagtgaacaatgatcatgccactgcactccagcctgggtgac i panTro4.chr17 M 1679 C 0 s ponAbe2.chr17 137969 134 + 73212453 aaattagacaggcgtggcggcgcacatctgtagtctcagctaccggggaagctggggcgggaagattgctggaccccaggagttggaggctgcagtgagcaatgatcatgccactgcactgcagcctgggtgac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 260877 134 - 81552678 aaattagacaggcgtggtggcgcacatctgtagtctcagctacccgggaagctggggcgggaagattgctggaccccaggagttggaggctgcagtgagcaatgatcatgccactgccctccagcctgggtgac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 171268 134 + 80904711 acattagacaggcatggtggcgcacatctgtagtctccgctacccgggaagctgaggcaggaaggttgcttgaccccaggaggtggaggctgcagtgagcaatgatcacgtgacttcactccagcctgggtgac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 176911 133 + 80997621 acattagacaggcatggtggcacacatctgtagtctccgctacccgggaagctgaggca-gaacattgcttgaccccaggaggtggaggctgcagtgagcaatgatcacgtgacttcactccagcctgggtgac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 170519 134 + 74645514 ACATTacacaggcatggtggcgcacatctgtagtctccGCTAcccgggaaactgaggcaggaaggttgcttgaccccaggaggtggaggctgcagtgagcgatgatcacgtgacttcactccagcctgggtgac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 160686 134 + 75148670 acattagccaggcacggtggtgcacatctgtagtctcagcgacccgggaagctgaggcaggaagattgcttgaccccaggaggtggaggctgcagtgagcaacgatcacgtgacttcactccagcctgggtgac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975529 133 - 1291538 aaattaggcaggcgtggtggcacacatctgttgtctcagctacccgggaagctggggcgggaagattgcttgagcccaggagttggaggctgcagtgagcaatgaccacgccac-acacgccaggctgggtgac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75902250 377 + 122082543 I e canFam3.chr9 15728403 325 - 61074082 I a score=203750.000000 s hg38.chr17_GL383563v3_alt 281920 78 + 375691 agagtgagaccctgtc-aaaacacagaaaagcaagaggaggagga-gagactagagccctctcctcctgccacacgagga s panTro4.chr17 258175 78 + 82630442 agagtgagaccctgtc-aaaacacagaaaaGCAGAGGGAGGAGGa-gagactagagccctctcctcttgccacacgagga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138103 78 + 73212453 agagtgagaccctgtc-aaaacacagaaaaGCAAGAGGAGGAGGA-GAGACTAGAGCCCTCTCCTCTTGCCACACGAGGA i ponAbe2.chr17 C 0 M 30 s nomLeu3.chr19 261011 79 - 81552678 agagtgagatcctgtcaaaaaaaaagaaaagcaagaggaggagga-gagactagagccctctcctcccgccacacgagga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 171402 79 + 80904711 agcgtgagaacctgtcaaaaaaacaaaaaagcaacaggaagagga-gagacccgagccctctccccttgccacacgagga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 177044 79 + 80997621 agcgtgagaacctgtcaaataaacaaaaaagcaacaggaggagga-gagacccgagccctctccccttgccacgcgagga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 170653 80 + 74645514 agcgtgagaacctgtcaaaaaaacaaaaaagcaacaggaggaggaggagaccagAGCCCTCTCCCCTTGCCACGCGAGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 160820 79 + 75148670 agcgtgagaacctgtcaaaaaaacaaaaaagcaacaggaggagga-gagaccagagccctctccccttgccacgcgagga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975662 74 - 1291538 a--gtgagaccctgtc-aaaaaata-agaaGCAAGAGGAGGAGGA-CAGACTagagccctctcctctcgccacatgggc- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902627 78 + 122082543 agtgtgaggccatacc-tgatgtgattaatgtctgtaaaggaaga-ggCAGCAGGGCTCCTGCCTGATGCCGTATGAGGA i mm10.chr11 I 377 C 0 e canFam3.chr9 15728403 325 - 61074082 I a score=299895.000000 s hg38.chr17_GL383563v3_alt 281998 170 + 375691 cacacggagaaggcagctgt-ctgcaagccatgaacagggccctcaccagacacagaatcagccagcaccttgatctcagaatttcgtgcctccaaact--gaaaaataaatatctacggctgaaggtgcc-----cagtctgtggcactttattagggcgatctgagctgactatga s panTro4.chr17 258253 170 + 82630442 cacacagagaaggcagctgt-ctgcaagccatggacagggccctcaccagacacagaatcagccagcaccttgatctcagaatttcgtgcctccaaact--gaaaaataaatgtctacggctgaaggcgcc-----cagtctgtggcactttattagggcggtctgagctgactatga i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261090 170 - 81552678 cacacggagaaggcagctgt-ctgcaagccgtgaagagggccctcaccaggcacagaatcagccagcaccttgatctcagaatttcctgcctccaaact--gaaaaataaatgtctactgctgaaggcgcc-----cagtctgtggcattttgttacggcggcctgagctgactgtga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 171481 167 + 80904711 cacgaggagacggcagctgt-ctgcgtgccagggaaagggccctcaccagacacagaatcagccagcaccttgatctcagaatttcgtgcctccaaactctg-a----aaatgcctactgctgaaggcacc-----tagtctgcggcacgttgttacggcggcctgagccgactaTGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 177123 167 + 80997621 cacgaggagacggcagctgt-ctgcgtgccagggaaagggccctcaccagacacagaatcagccagcaccttgatctcagaatttcgtgcctccaaactctg-a----aaatgcctactgctgaaggcacc-----tagtctgcggcacgttgttacggcggcctgagccgactaTGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 170733 168 + 74645514 CACGAGGAGACAGCAGCTGT-CTGCGTGCCAGGgaaagggccctcaccagacacagaatcagccagcaccttgatctcagaatTTCGTGCCTCCAAACTCCGAA----AAATGCCTACTGCTGAAGGCGCC-----TAGTCTGCGGCGTGTTGTTACGGCGGCCTGAGCCGACTACGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 160899 166 + 75148670 cacgaggagaaggcagccgt-ctgcgtgcccgggaaagggccctcaccagacacaggatcagccagcaccttcatctcagaatttcgtgcctccaaact--gaa----aaacgcctacagctgaaggcgcc-----tagtctgtggcgtgttgttacgggggcctgagccgactatgc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975736 160 - 1291538 cacaagaagatg---gctgt-ctgcacaccaggaagagcaccctcaccagacacagaatctgccagcacctgggtctcag--tttcgtgcctccaa--t--gaa----acatgtccactgctgagggcgcccagttcagtccatggtgttttgttgtggtgacctgGGTC----ATGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902705 121 + 122082543 -------AAAAGCCATCCATGAGGCAGGCCAGGGAGACG-------------------TCGACTTGC--------CTTGGACTTCCCAGTCACAAACCACAGGG----AAATAAATA-----AAGGGTTGT-----TAG-----GGCATCTTGCCCCGGCTGGCTGATCT----GTGC i mm10.chr11 C 0 C 0 e canFam3.chr9 15728403 325 - 61074082 I e ponAbe2.chr17 138181 30 + 73212453 M a score=186539.000000 s hg38.chr17_GL383563v3_alt 282168 75 + 375691 caCGGGGAGTCACTCAGCCTCTTCTGAAATGTCTGGGGATCTGCTCCATCGTTGGTAACACGTGTGTGGCCTCAG s panTro4.chr17 258423 75 + 82630442 caCGGGGAGTCACTCAGCCTCTTCTGAAATGTCTGGGGATCTGCTCCATCGTTGGTAACACGTGTGTGGCCTCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138211 67 + 73212453 CACGGGGAGTCACTCAGCCTCTCT--GAATGTCT--GGATCTGCTCCATCGTGG----TACACGTGTGGGCTCAG i ponAbe2.chr17 M 30 C 0 s nomLeu3.chr19 261260 75 - 81552678 caCGGGGAGTCACTCGGCCTCTTCTGAAATGTCTGGGGATCTGCTCCATCCTTGGTAACACGTGTGCGGCCTCAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 171648 75 + 80904711 CACGGGGAGTCACTCAGCCTCTTCTGCAGTGTCTGGGGATCTGCTCCATCCTGGGTAACACGTGTGTGGCCTCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 177290 75 + 80997621 CACGGGGAGTCACTCAGCCTCTTCTGCAGTGTCTGGGGATCTGCTCCATCCTGGGTAACACGTGTGTGGCCTCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 170901 75 + 74645514 CACGGGGAGTCACTCAGCCTCTTCTGCAATGTCTGGGGATCTGCTCCATCCTTGGTAACACGTGTGTGGCCTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 161065 74 + 75148670 caCGGGGAGTCACTCAGCCTCTTCTGAAATGTCTGGGGATCTGCTCCATCCTTGGTAACACG-GTGTGGCCTCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975896 73 - 1291538 CCCAGGGAGTCACTCAGCCTCTTTGGAGACATCC-TGGACCTGCTCCATCCTCA-TAACACGCGTGCAGCCTCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902826 61 + 122082543 --------CTCGCTCTGTGTCTCCTGTGAT-CATGATGGTCGGGTCCATGCTCTGTGGCAAACCT-----CTGAG i mm10.chr11 C 0 C 0 e canFam3.chr9 15728403 325 - 61074082 I a score=22557.000000 s hg38.chr17_GL383563v3_alt 282243 11 + 375691 CAGGCAGGACC s panTro4.chr17 258498 11 + 82630442 CAGGCAGGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138278 10 + 73212453 CAGGCAGGA-C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 261335 11 - 81552678 CAAGCGGCACC i nomLeu3.chr19 C 0 I 103 s rheMac3.chr16 171723 11 + 80904711 CGGGCCGGACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 177365 11 + 80997621 TGGGCCGGACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 170976 11 + 74645514 CAGGCCGGACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 161139 11 + 75148670 CAGGCAGGACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975969 11 - 1291538 CAGGCAGGACC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902887 10 + 122082543 CAGGGAGCCC- i mm10.chr11 C 0 C 0 s canFam3.chr9 15728728 11 - 61074082 cagggatcccC i canFam3.chr9 I 325 C 0 a score=117280.000000 s hg38.chr17_GL383563v3_alt 282254 64 + 375691 CTGAAGAGGTTTC----ATaacaatcacaggcat------------cctttactgcacgctgccaatgggccaggcagtc s panTro4.chr17 258509 64 + 82630442 CTGAAGAGGATCC----CTaacaatcacaggcat------------cctttactgcacgctgccaatgggccaggcagtc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138288 63 + 73212453 CTGAAGCGGATTC----ATaacaatcacaggcat------------cctttactgcatgctgccaacgga-caggctgtc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 171734 64 + 80904711 CTGGAGTGGATTC----TCAACCGTCACAGGCAT------------CCTTTACTGCATGCTGCCCGCGGGCCAGGCAGTC i rheMac3.chr16 C 0 I 418 s macFas5.chr16 177376 64 + 80997621 CTGGAGTGGATTC----CCAACCGTCACAGGCAT------------CCTTTACTGCATGCTGCCCGCGGGCCAGGCAGTC i macFas5.chr16 C 0 I 38 s papAnu2.chr16 170987 64 + 74645514 CTGGAGTGGATTC----TTAACCACCACAGGCAC------------CCTTTACTGCAGGCTGCCCGCGGGCCAGGCGGTC i papAnu2.chr16 C 0 I 38 s chlSab2.chr16 161150 64 + 75148670 CTGGAGTGGATTC----TTAACCGTCACAGGCAC------------CCTTTACTGCATGCTGCCCGCGGGCCAGGCGGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 975980 59 - 1291538 -CTGAGAGGGTGA----GCAGCAGTCACAGGCG-------------CTTTCACTGCCGGCTGGTGATGGGCTGGGCA--- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902897 72 + 122082543 CTGGGGTGGCCCG----GTCACCATGACAGTGACAGGGTGCCCctgcctttgctaggagctagtgatggagcaggc---- i mm10.chr11 C 0 C 0 s canFam3.chr9 15728739 68 - 61074082 TTGGAGTGGATTTAATAATAACAGCAACAGGTAT------------CCCATACTGGGTGTTTGAAATGGACCCTACACTC i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 261346 103 - 81552678 I a score=4999.000000 s hg38.chr17_GL383563v3_alt 282318 10 + 375691 tgctaagggc s panTro4.chr17 258573 10 + 82630442 cgctaagggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138351 10 + 73212453 cactaagggc i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 177478 7 + 80997621 ---tactgga i macFas5.chr16 I 38 I 4 s papAnu2.chr16 171089 7 + 74645514 ---tactgga i papAnu2.chr16 I 38 I 4 s chlSab2.chr16 161214 9 + 75148670 -GGCGACgga i chlSab2.chr16 C 0 I 77 s mm10.chr11 75902969 10 + 122082543 tgtgaagggc i mm10.chr11 C 0 I 3 s canFam3.chr9 15728807 10 - 61074082 CGCTAAAGGC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 976039 0 - 1291538 C e rheMac3.chr16 171798 418 + 80904711 I e nomLeu3.chr19 261346 103 - 81552678 I a score=-6738.000000 s hg38.chr17_GL383563v3_alt 282328 15 + 375691 ttctcctgcac---------------------tatt-------- s panTro4.chr17 258583 15 + 82630442 ttctcctgcac---------------------tatt-------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138361 15 + 73212453 ttctcatgcac---------------------taat-------- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 177489 15 + 80997621 ctagcctgagc---------------------aatc-------- i macFas5.chr16 I 4 I 22 s papAnu2.chr16 171100 15 + 74645514 ctagcctgAGC---------------------AATT-------- i papAnu2.chr16 I 4 I 22 s calJac3.chrUn_GL286409 976039 11 - 1291538 TCACCACTCAC--------------------------------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75902982 15 + 122082543 cttgcatcagc---------------------taat-------- i mm10.chr11 I 3 I 9 s canFam3.chr9 15728817 44 - 61074082 TTCCTCTGAGCCTGAGATGAGCCCTCttagctcatctcctcctc i canFam3.chr9 C 0 C 0 e chlSab2.chr16 161223 77 + 75148670 I e rheMac3.chr16 171798 418 + 80904711 I e nomLeu3.chr19 261346 103 - 81552678 I a score=240831.000000 s hg38.chr17_GL383563v3_alt 282343 132 + 375691 gcatccatc-aacgatgac---agaagcttaat-----------------gaccccattttacagatgaaagaacagaggcccagagaggttaagtgacttgtacgagaccgcgccaccgtggccaagct-gggacctcaacccaagtctgtct s panTro4.chr17 258598 132 + 82630442 gcatccatc-aacgatgac---agaagcttaat-----------------gaccccattttacagatgaaagaacagaggcccagagaggttaagtgacttgtacgagaccgcgccaccgtggccaagct-gggacctcaacccaagtctgtct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138376 132 + 73212453 gcatccatc-agtgatgac---ggaagcttaat-----------------gaccccattttacagatgaaagaacagaggcccagagaggttcagtgacttgtacgagaccgcgccaccgtggccaagct-gggacctcgactcaagtctgtct i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 177526 133 + 80997621 GCATCCATC-AACAGAGAC---GGAAGCttagt-----------------gaccccattttacagatgaaagaacagaggcccagagaggttaagtgacctgtacgagaccgcaccacgttggccacgctggggacctcaacctgagtccgtct i macFas5.chr16 I 22 C 0 s papAnu2.chr16 171137 132 + 74645514 GCATCCATC-AACAGAGAC---CGAAGCTTAAt-----------------gaccccatttcacagatgaaagaaCAGAGGCCcggagaggttaagtgacctgtACGAGACCGCACCACCGTGGCCACACT-GGGACCTCAACCCGAGTCCGTCT i papAnu2.chr16 I 22 C 0 s chlSab2.chr16 161300 132 + 75148670 GTATCCATC-AACAGAGAC---GGAAGCTTAAC-----------------GAccccgttttacagctggaagaacagaggcccggagaggttaagtgacctgtatgagaccgcgccacggtggccacgct-gggacctcaacccgagtccgtct i chlSab2.chr16 I 77 C 0 s calJac3.chrUn_GL286409 976050 148 - 1291538 TCGTCCATC-AA-GATGAG---AGAAGCTTGATGATGCCATTTTACAGACGActccattttacagatggcaaaacagaggcccagagatgtgaagtgatttgaccatgactgctccaccagggccacgcg-gggacctcaacccaagtctgtcg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75903006 127 + 122082543 acatccacctggtgctgat---ggctgcctttc-----------------gaccttgtcttacagataaaggaatgaaggcggagagaggcggagtgagttTTACCAGAGCCCTCCACAGAAGCAATA-T-GGGAACGGGACCCAAGCC----- i mm10.chr11 I 9 C 0 s canFam3.chr9 15728861 126 - 61074082 acacccatccaatggtgatataagtagctttcc-----------------tatttcat-ttacagttaaagaaacagaagcccagagaggttaagtgactcgtatgaggacactgtgctgtagtccagct-ggggctgcaaccca--------- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 171798 418 + 80904711 I e nomLeu3.chr19 261346 103 - 81552678 I a score=24231.000000 s hg38.chr17_GL383563v3_alt 282475 9 + 375691 ggtcctgca s panTro4.chr17 258730 9 + 82630442 ggtcctgca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138508 9 + 73212453 ggtcctgca i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 172216 9 + 80904711 GGTCCCGCG i rheMac3.chr16 I 418 C 0 s macFas5.chr16 177659 9 + 80997621 ggtcccgca i macFas5.chr16 C 0 I 723 s papAnu2.chr16 171269 9 + 74645514 GGTCCTGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 161432 9 + 75148670 ggtcctgca i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 976198 9 - 1291538 ggctcagca i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75903133 9 + 122082543 GGTCCTACA i mm10.chr11 C 0 C 0 e canFam3.chr9 15728987 0 - 61074082 C e nomLeu3.chr19 261346 103 - 81552678 I a score=1132908.000000 s hg38.chr17_GL383563v3_alt 282484 597 + 375691 gctccgtgcacaaccacctcacaatcctgcAGCCAGGGAGGAGGGAAGCTAGCCGTGCCAGGTGCTTGCAGGAACACGGAGGCACTCCTGAAAGTACAGATGAGTCCCTCCCATCTGGGCAGGAGCCCCCAGCACTGCGTGGCATCTGCGTGGGGACAGTCCTCACTGGCAAGTCCAGGAGAACCGGCTGCCCTCTTGCTGCTCAGGGTGGACCAAGCGACCTCTCATTCCAGC---CC-CCTGAAGTCGAGAGCTC--TTTCCTTCCTAGAACCCTCCTTCACCCCCTCTAATTCCTCTCCATCTGCTTAGAATACACTGAAGAGGCTGACGCTCTGTCTCAGCAaatggcctcagtccctacgttgcc-tgtct-ccatccctatcatctc-ccagtgacggccatcaccacc----------------------------------------------------------------------------------------tgtctccagc-----------------------------------------actagggtcgtctcttaaaaacaca--------------------------gatcagatcac--------------------------------------------------------------ac----ccctgctcaaaa-------------------------------cactccac----------------------------------------------------------------------------------------------------------tggcatctcattaaact-ta-agtgaaatctcagctcctgaccttgactggcgaggct---gtgtga--tgggccat-ccggccgctca--ctctctgccccagatgccaccatgtgccccttgaacatgccc s panTro4.chr17 258739 597 + 82630442 gctccgtgcacaaccacctcacaatcctgcAGCCAGGGAGGAGGGAAGCTTGCCGTGCCGGGTGCTTGCAGGAACACAGAGGCACTCCTGAAAGTACAGATGAGTCCTTCCCATCTGGGCAGGAGCCCCCAGCACTGCGTGGCGTCTGCGTGGGGACAGTCCTCACCGGCAAGTCCAGGAGAACCAGCTGCCCTCTTGCTGCTCAGGGTGGACCAAGCGACCTCTCATCCCAGC---CC-CCAGAAGTCGAGAGCTC--TTTCCTTCCTAGACCCCTCCTTCACCCCCTCTAATTCCTCTCCATCTGCTTAGAATACACTGAAGAGGCTGACGCTCTGTCTCAGCAaatggcctcagtccctgcgttgcc-tgtcc-ccatccctaccatctc-ccagtgacggccatcaccacc----------------------------------------------------------------------------------------tgtctccagc-----------------------------------------actagggtcgtctcttaaaaacaca--------------------------gatcagatcac--------------------------------------------------------------ac----ccctgctcaaaa-------------------------------cactccac----------------------------------------------------------------------------------------------------------tggcatctcattaaact-ta-agtgaaatctcagctgctgaccttgactggcgaggct---gtgtga--tgggccat-ccggccgctca--ctctctgccccagatgccaccatgtgccccttgaacatgccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 138517 598 + 73212453 gctccgtgcACAACCACCTCACAATCCCG----CAGGGAGGAGGGAAGCTGGCCCTGCCCGGTGCTTGCGGGAACACGGAGGCACTCCTGAAAGTACAGATGAGTCCCTCCCATCTGGGCAGGAGCCCCCAGCACTGCGTGGCGTCTGCGTGGGGACAGTCCTCACCAGCAAGTCCAGGAGCACCGGCTGCCCCCTTGCTGCTCAGGGTGGACCAAGCGACCTCTCACCCCGGC---TC-CCTGAAGTCTAGGGCTC--TTTCCTTCCTGGAACCCTCCTTCACCCCCTCTAATTCCTCTCCATCTGCTTAGAATACACTGAAGAGGCTGACGCTCTGTCTTAGCAAATGGCCTCAGTCCCTATGTTGCC-TGTCC-CCAGCCCTATCGTCTC-CCAGTGAGAGCCATCAACGCC-----------------------------------------------------------------------------------TAACTTGTCTCcagc-----------------------------------------actagggtcatctcttaaaaacaca--------------------------gatcagatcac--------------------------------------------------------------ac----ccctgcttaaaa-------------------------------tactccac----------------------------------------------------------------------------------------------------------tggcatcccattaaact-ta-agcgaaatctcggctcctgacctggactggcgaggct---ccgtga--taggccat-cctgccgctca--ctctctgccccagatgccaccatgtgccccttgaacatgccc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 172225 588 + 80904711 GCTCCGTGCACGACCACCTCACGGTCCTGCAGCCAGGGAGGAGGGAAGCTGGCCCTGCC-GGTCCCTGCAGGAACACGGAGGCACCCCTGAAAGTACAGACGAGGCCCTCCCATCCGGGCCCGAG-CCCCAGCGCTGCGTGGCGTCTGCGTGGGGACAGTCCTCACTGGCAAGTCCAGGA-----------CCACCTGCTGCTCGGGGTGGACCAAGCGACCTCTCACCCCGGC---CC-CCGGCAGTCTAGGGCTC----TCCTTCCTAGAACCCTCGTTCACCCC----AATTCCTCCCCATCTGCTGAGAATACACTGAAGAGGCCGACGCTCTGTCTTAGCAAATGGCCTCAGTCCGTACGTGGCCTTGTCC-CCAACCCCGTCATCTC-CCGGTGACGGCCATCCCCACC-----------------------------------------------------------------------------------TAACTTGTCTCcagc-----------------------------------------actacggtcatctcttaaaaacaca--------------------------gatcacatcac--------------------------------------------------------------ac----ccctgcttcaga-------------------------------cactccgc----------------------------------------------------------------------------------------------------------tggcgtcccattaaacg-ca-ggtgaaatctcagctcctgaccctgaccggcgaggctc-cctgtga--tgggccat-cccgccgctcacgctcgctgccccagatgccaccatctgccccttcaacatgccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 178391 568 + 80997621 GCTCCGTGCACGACCACCTCACGGTCCTGCAGCCAGGGAGGAGGGAAGCTGGCCCTGCC-GGTCCCTGCAGGAACACGGAGGCACCCCTGAAAGTACAGACGAGGCCCTCCCATCCGGGCCCGAG-CCCCAGCGCTGCGTGGCGTCTGCGTGGGGACAGTCCTCACTGGCAAGTCCAGGA-----------CCACCTGCTGCTCGGGGTGGACCAAGCGACCTCTCACCCCGGC---CC-CCGGCAGTCTAGGGCTC----TCCTTCCTAGAACCCTCGTTCACCCC----AATTCCTCCCCATCTGCTGAGAATACACTGAAGAGGCCGACGCTCTGTCTTAGCAAATGGCCTCAGTCCGTACGtggtcttgtcc-ccaacc---------------------ccatccccacc-----------------------------------------------------------------------------------taacttgtctccagc-----------------------------------------actacggtcatctcttaaaaacaca--------------------------gatcacatcac--------------------------------------------------------------ac----ccctgcttcaga-------------------------------cactccgc----------------------------------------------------------------------------------------------------------tggcgtcccattaaacg-ca-ggtgaaatctcagctcctgaccctgaccggcgaggctc-cctgtga--tgggccat-cccgccgctcacgctccctgccccagacgccaccatctgccccttcaacatgccc i macFas5.chr16 I 723 C 0 s papAnu2.chr16 171278 588 + 74645514 GCTCC--GCGCGACCACTTCACAGTCCTGCAGCCAGGGAGGAGGGAAGCTGGCCCTGCC-GGTCCCTGCAGGAACACGGAGGCACCCCTGAAAGTACAGACGAGTTCCTCCCATCCGGGCACGAG-CCCCAGCACTGCGTGGCGTCTGCGTGGGGACAGTCCTCACCGGCAAGTCCAGGA-----------CCACCTGCTGCTCGGGGTGGACCAAGCGACCTCTCGCCCCGGC---CC-CCGGCAGTCTGGGGCTC--TTTCCTTCCCAGAACCCTCGTTCACCCC----AATTCCTCCCCATCTGCTGAGAATACACTGAAGAGGCCGACGCTCTGTCTTAGCAAATGGCCTCAGTCCTCACGTGGCCTTGTCC-CCAACCCTATCATCTC-CCGGTGACGGCCATCCCCACC-----------------------------------------------------------------------------------TAACTTGTCTCCAGC-----------------------------------------ACTACGGTCATCTCTTAAAAACACA--------------------------GATCACATCAC--------------------------------------------------------------AC----CCCTGCTTCAGA-------------------------------CACTCCGC----------------------------------------------------------------------------------------------------------TGGCGTCCCATTAAACG-CA-GGTGAAATCTCAGCTCCTGACCTTGACCGGCGAGGCTC-CCTGTGA--TGGGCCAT-CCCGCCGCTCACACTCCCTGCCCCAGACGCCACCATCTGCCCCTTGAACATGCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 161442 545 + 75148670 ggaccg-GCACGACCACCTCACAGT---------------------------------------CCTGCAGGAACACGGAGGCACCCCTCGAAGTACAGACGCGTCCCTCCCATCCGGGCCTGAG-CCCCAGCACTGCGTGGCGTCTGTGTGGGGACAGTCCTCACCGGCAAGTCCAGGA-----------CCACCTGCTGCTCAGGGTGGACCAAGCGACCTCTCGCCCCGGC---CC-CCGGCAGTCTGGGGCTC--TTTCCTTCCCAGAACCCTCGTTCACCCC----AATTCCTCCCCATCTGCTGAGAATACACTGAAGAGGCCGACGCTCTGTCTTAGCAGATGGCCTCAGTCCGTACGTGGCCTTGTCC-CCAACCTCGTCATCTC-CCGGTGACGGCCATCCCCACC-----------------------------------------------------------------------------------TAACTTGACCGTag-----------------------------------------------ggtcatctcttaaaaacaca--------------------------gatcacatcac--------------------------------------------------------------ac----ccctgcttcgga-------------------------------cactccgc----------------------------------------------------------------------------------------------------------tggcgtcccactaaact-ca-ggtgaaatctcagctcctgaccttgaccggcgaggctc-cgtgcga--tgggccat-cccgccgctcacactccctgccccagacgccaccatctgccccttgaacatgccc i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 976207 682 - 1291538 gctcAGGGCACAGCCACCTCACAATCTTGGGGCCAGGGAGGAGGGAAGCT-GCCCTGCCAGACCCTTGTGGGAACATGGAGTCACTTCTCAAAGTATGGATGAGCCCCTCCCATCCGGTCATGAGCCCTCAGCATCGTGTTGTGTCTGTGTGGGTACAGAACTCACCAGCCAGTTCAGTAGCACCTGCTGCCCCCTTG-TGCTCA-GGTAGACCAAGTGGCCTTTCACCCTGGCTGGCC-CCTACAGTCCAGGGCTC--TTTCCTTCCTATAACCCTTATTCACCCCCTCTAACTCCTCCCCATCTGCTCAGAATACGCCAAAGAGGCTGGCGCTGTGTCTCAGCAAATGGCCTCAGTCCCTTCGTGGCCTTGTC--CCGACCCTATCATCCC-CCAGGGacggccatcaccacctgacttgtctccagctcgtctcccagggatggccatcactacctgactttccagcttgtcccccagggacggccatcaccacctgacttgtctccagc-----------------------------------------accagggtcatctcttaaaa--tca--------------------------ggtcccatcac--------------------------------------------------------------ac----cccagcttaaaa-------------------------------ctctccac----------------------------------------------------------------------------------------------------------tgacatcccattaaactccc-ggtgaaatcccaactcctGGCCTTG-CTGGC-AAACTG-TGTGTGA--TGGGCCAA-CCCGCCGCTCA----CTCTGTCCCAGACGCCAGCATCTGTCCCTTGAACATGCCC i calJac3.chrUn_GL286409 C 0 I 42 s mm10.chr11 75903142 809 + 122082543 GCTGTGGGTACCTCTGTACCTCTGTTCCTGCTTCGAGGAAGAGAGAAAC--ACCCTTCAATTTGTGTCCAcaggcaggcaggca---------------------------------ggcaggAGTCACAGGAACTTCCCAGGGCTAGTGTGGGAACAGTA--TACTAGCCATTCTGAGA---------------------CGCAGTG-GGGCCAAGTG-CCTCTCACTTTGGC---TT-TCTCCTGGCCAGGGCTC----TTCATCA-GGGACTCTCACTTACAACCTTTAACTCTTCCCCATCTGATCAGAACACACAAAAGACACTGATGCTCTA--TTAGCATAGGGCTTCCATCCCCATGATGCCTTGTTCtccaggccttcattctt-ctaatggcagccatcactacc-----------------------------------------------------------------------------------aagcttgcctcccacttgcgtactgtttttcccaacagcctatttgacctgcaacagctagagccaccccttgaaaacacaccaggggctggagagctgactcagttggtaagagcactggctgctcttccacagggcagggttcaagtaatagcaactacgtggtggctcacaagggcaac----ttcagcttcagaggatatgctgccctcttctggctgatgcaggcactgcactcacagagtgcacagacatgcagaaaaggcaaaacacccaatatacaaccacaaaacaaactgtatcccgtcctttctcagtaccccatgccatgcccagtctccatggcatcctcctaaaca-cacaatgaaattccagtttctgacttggagttatgaggctc-tgtggaacctggcccaagctcatccctcgctccctctgttccagatacttctgctagctcttaga----gccc i mm10.chr11 C 0 C 0 s canFam3.chr9 15728987 476 - 61074082 ------------------------------------------------------------------------TACCCGTGGGCACT------------------------------------------------------------------GAAACGGCACTTACTGGCAAGCCCAGAAGGACCACAG--TCACCCATCACACGGGATGGACCAAGTGATCCCTTGCTCTGGC---CTGTCTGTAGTCTAGAACCCACTTTTCCTCCCGGGACCCTCAATCAC----------------CCACCTGCTCAG-ATACAGTGAAAAGATGGAC----TTTCTTAACATGTGACCCCCA-cactgtgctaccttgtct-ccagccccactgtctcacccctaatgacaggcagtgcc-----------------------------------------------------------------------------------taacttatctcccactgttactttatgtccctccgcaatccactcgccagatagcagctaggctcatccctcacaaagaca--------------------------aattagatcac--------------------------------------------------------------atcacaccctgcttaaaa-------------------------------cactccag----------------------------------------------------------------------------------------------------------tggcatcccatgaaggt-tagaatcaaatctcaactcctgaccttgacttacgaagctcttgtgtga--tggg-cat--------------------gtctccgatgccttcattagctccttgaacatgccc i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 261346 103 - 81552678 I a score=222171.000000 s hg38.chr17_GL383563v3_alt 283081 110 + 375691 agctcgttcctgcctcagggccttcaggactgttccaggggaagcttgccgttccctctgccgggaacactgttccacccagat-cttcccagggccagctgttgcttgtg s panTro4.chr17 259336 110 + 82630442 agctggttcctgcctcagggccttcaggactgttccaggggaagcttgccgttccctctgccgggaacacttttccacccagat-cttcccagggccagctgttgcttgtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 139115 109 + 73212453 agctggttcctgcctcagggccttcaggactgtt-caggggaagcttgccgttccctctgccgggaacacttttccacccagat-cttcccagggccagctgttgcttgtg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 172813 105 + 80904711 agctggttcctgcctcagggccttcgggactcatccgggggaagcctgccgttccctccgccgag---acggttccacccagat-cttcccagggctggctcctgct--tg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 178959 104 + 80997621 agctggttcctgcctcagggccttcgggactcat-cgggggaagcctgccgttccctccgccgag---acggttccacccagat-cttcccagggccggctcctgct--tg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 171866 105 + 74645514 AGCtggttcctgcctcagggccttcgGGACTCATCCGGGGGAAGCCTGCCGTTCCCTCCGCCGGG---ACAGTTCCACCCCGAT-CTTCCCAGGGCCAGCTCCTGCT--TG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 161987 105 + 75148670 agctggttcctgcctcagggtcttcaggactcatccaggggaagcctgccgttccctctgccggg---acagttccacccagat-cttcccagggccagctcctgct--tg i chlSab2.chr16 C 0 C 0 s mm10.chr11 75903951 92 + 122082543 agctggtt-ctacctcagagtcttcgt----------------gcctgcaggtgcctctgcccagaacatatttccacccggatcctccccaaggctgactgttgct--tg i mm10.chr11 C 0 I 2 s canFam3.chr9 15729463 94 - 61074082 agtgggtttccacctcaggaacttcat----------------gcttgctgcttcctctgcctggaacccttttccattcagat-cttcccagaactggcttctgcttatg i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 976889 42 - 1291538 I e nomLeu3.chr19 261346 103 - 81552678 I a score=193670.000000 s hg38.chr17_GL383563v3_alt 283191 126 + 375691 tttgggcctgagctcagagaggccccctaagcctctcccta--ggtgctctgcgttaattca--acagag----------------------------------------tcctcggtgtacctagtcttgcttcatgtttatt-----------------------------------------------------------------catttg----------------tcttctctatgccctgaccc- s panTro4.chr17 259446 126 + 82630442 tttgggcctgagctcagagaggccccctaagcctctccctA--GGTGCTCTGCGTTAATTCA--ACAGAG----------------------------------------TCCTCGGTGTACCTAGTCTTGCTTCATGTTTATT-----------------------------------------------------------------CATTTG----------------TCTTCTCTATGCCCCGACCC- i panTro4.chr17 C 0 I 272 s ponAbe2.chr17 139224 126 + 73212453 tttgggcctgagctcagagaggccccctaagcctctcccta--ggtgctctgtgttaattca--acagag----------------------------------------tcctcggtgtacctagtcttgcttcgtgtttact-----------------------------------------------------------------catttg----------------tcttctctatgccccgaccc- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 172918 124 + 80904711 tctgggcctgagccgggagaggccccc-aggccgcccgcta--ggagctccgcgttaattca--gcggtg----------------------------------------tcctc-gggtgcctagtgctgctccatgtttagt-----------------------------------------------------------------cgtttg----------------tcttctccatgccccgaccc- i rheMac3.chr16 C 0 I 1 s macFas5.chr16 179063 124 + 80997621 tctgggcctgagccgggagaggccccc-aggccgcccgcta--ggagctccgcgttaattca--gcggtg----------------------------------------tcctc-gggtgcctagtgctgctccatgtttagt-----------------------------------------------------------------cgtttg----------------tcttctccatgccccgaccc- i macFas5.chr16 C 0 I 1 s papAnu2.chr16 171971 125 + 74645514 TTTGGGCCTGAGCCGGGAGAGGCCCCC-AGGCCGCCCGCTA--GGAGCTCCGCGTTAATTCA--GCGGCG----------------------------------------TCCTCGGGGTGCCTAGTGCTGCTCCATGTTTAGT-----------------------------------------------------------------CATTTG----------------TCCTCTCCAGGCCCCGACCC- i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 162092 124 + 75148670 tttggtcctgagcccagagagaccccg-aggccgcacgcta--ggagctctgcattaattca--gtggcg----------------------------------------tcctc-gggtacctagtgctgctccatgtttatt-----------------------------------------------------------------cctttg----------------tcttctccatgccccgaccc- i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 976931 229 - 1291538 TGTGGGCGTGAGGTCAGAGAGGGCACCGAAGCCTCTCCC-A--TGCACTCCGCATTAATTC---TCGGTGTCCAACTGCTACTTCGTTTGTATTCATTTGTCTTCTCTGTTCCTCAGTGTACTGAGTGCTGCCTCATGAATGCTATAACATGAAGCAGAGCACGACACAGAGCACCTAGGGAGAGGCTCTGGGGACCCTCTCTGAGCtccatttg----------------tcttctctattaccccaccc- i calJac3.chrUn_GL286409 I 42 I 1 s mm10.chr11 75904045 130 + 122082543 -tccagagtcggttcagaGAGGCCT-----GCCTCCCTTTACCAAGACTCCACTTTGA------ACAAAG----------------------------------------TGCTAAGTCTTCctggcattattttgtgtttgct-----------------------------------------------------------------catttaaaatttgtttgctgttccttctctgctatccc----- i mm10.chr11 I 2 C 0 s canFam3.chr9 15729557 123 - 61074082 ctcaggtctgagctcagagaggcactcctggccatacccta--ccacactgccctcaatttactacagag----------------------------------------ccctcagtctacttgacagtatt------ttatt-----------------------------------------------------------------tgtctg----------------ttgtctcccttctctcactcc i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 261346 103 - 81552678 I a score=180222.000000 s hg38.chr17_GL383563v3_alt 283317 102 + 375691 tggaaagtcatctccacaacagggtggactgtgtccatctcgttcacggcgtcggca-ggacccagaacacggcttgcacacaatggg----ctattatttacagaa s ponAbe2.chr17 139350 102 + 73212453 tggaaagtcgtctccacgacagggtggactgtgtccatcttgttcacggcgtcgaca-gcagccagaacagggcttgcacacaatggg----ctattatttacagaa i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 173043 97 + 80904711 tggaaagtcgtctccaccacagggtggactttg----tctcgttcacggcgtcgcca--cacccggagcagggcttgcacacgatggg----ctattgtttaaagaa i rheMac3.chr16 I 1 C 0 s macFas5.chr16 179188 97 + 80997621 tggaaagtcatctccaccacagggtggactttg----tctcgttcgcggcgtcgcca--cacccggagcagggcttgcacacgatggg----ctattgtttaaagaa i macFas5.chr16 I 1 C 0 s papAnu2.chr16 172097 98 + 74645514 TGGAAAGTCGTCTCCACCACAGGGTGGACTTTG----TCTCGTTCGCGGCGTCGCCA-GCACCCGGAGCAGGGCTTGCACACGATGGG----CTATTGTTTAAAGAA i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 162217 98 + 75148670 tggaaagtcatctccaccacagggtggactttg----tctctttcacggcgtcgcca-gcacccggagcagggcttgcacacgatggg----ctattgtttaaagaa i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 977161 103 - 1291538 tggaaagtcatctccgtgagagtgaggactctgtccgtcttgttcacggcatcgccatgaacccagaacagggccttcacacagtggg----ctattaatcaaagaa i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75904175 88 + 122082543 tggaaaacagcgtcaatgagagcaaggattttt----tttt----------tcccta-tcccctggaac-cagcctgcacacagtggac---cttctatTTAAAGAA i mm10.chr11 C 0 I 216 s canFam3.chr9 15729680 106 - 61074082 tggaaaaaaatcaccatgagagcaagggttttgtctctctcattcatactattgcta-gtacctagaacaggccttgcacacagcaggccctctactatttgcagaa i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 261346 103 - 81552678 I e panTro4.chr17 259572 272 + 82630442 I a score=75164.000000 s hg38.chr17_GL383563v3_alt 283419 62 + 375691 tgaatgaaGATGAATGAACGAATGACACCACCTTCTCCAAGAAGGAAGAGTGAACCCTCCAA s ponAbe2.chr17 139452 62 + 73212453 tgaatgaatATGAACAAACGAATGACACCACCTTCTCCAAGAAGGAAGAGTGAACCCTCCAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 173140 61 + 80904711 cgagtgactacgaatgaacgaatGACACCACCTTCTCCAAGAAGTTAGAGTG-ACCCTCCGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179285 61 + 80997621 cgagtgactacgaatgaacgaaCGACACCACCTTCTCCAAGAAGTTAGAGTG-ACCCTCCGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172195 61 + 74645514 CAAGTGACTACGAATGAACGAACGACACCACCTTCTCCAAGAAGTTAGAGTG-ACCCTCCGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 162315 61 + 75148670 tgagtgactacgaatgaacgaaCGACACCACCTTCTCCGAGAAGTTAGAGTG-ACCCTCCAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977264 44 - 1291538 tgaatgC-----------------ACATAATCTCCTCCAAGAAGGAAGTGTGAACTCTTC-A i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15729786 57 - 61074082 tgaatga--atGAGCAAACAGGTGACATGCTTTTCTTGAGGATGGAGAAGAAAACGCAC--- i canFam3.chr9 C 0 C 0 e mm10.chr11 75904263 216 + 122082543 I e nomLeu3.chr19 261346 103 - 81552678 I e panTro4.chr17 259572 272 + 82630442 I a score=125651.000000 s hg38.chr17_GL383563v3_alt 283481 82 + 375691 AGCCCCCAAATGCCCACCATCCAGCTGTGCTCCC--CTAATACACTCCCCTCCCACCTCAATCCTGGAACAAGCCCCTCAGAAG- s ponAbe2.chr17 139514 73 + 73212453 AGCCCCTAAAAGCCCACCATCCAGCTGTGTTCCC--CTAATACCCTCCCCTCCCACCTCAGTCCTGGAACAAGCC---------- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 173201 66 + 80904711 AG-CCCCAAATGCCCACCATCCAGCAG------C--CCCACACCCTCTCCTCCCACCTCAATCCTGGAACAAGCC---------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179346 67 + 80997621 AGCCCCCAAATGCCCACCATCCAGCAG------C--CCCACACCCTCTCCTCCCACCTCAATCCTGGAACAAGCC---------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172256 73 + 74645514 AGCCCCCAAATGCCCACCATCCAGCGGTGTTCCC--CTCACACCCTCTCCTCTCACCTCAATCCTGGAACAAGCC---------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 162376 73 + 75148670 AGCCCCCAAATGCCCACCATCCAGCAGTGTTCCT--CCCATACCCTCTCCTCCCACCTCAATCCTGGAACAAGCC---------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977308 72 - 1291538 ACCCCCCAAATGCCCACCATCCAGCTGTGTTT-C--CTAACACCCTCTCCTCCCGCCTCCAACCTGGAACACGAC---------- i calJac3.chrUn_GL286409 C 0 I 9 s mm10.chr11 75904479 62 + 122082543 AGCCCCCCAATGCCCTCATCTAAACAGT-----------ACTCCCTCCCCTTCCACCTTTGTCCTG--ACAAGTT---------- i mm10.chr11 I 216 I 3 s canFam3.chr9 15729843 68 - 61074082 --------AATGCCCACTATTCAGCTGTGGCCCCAGCTAGCACCCTTTCCTCCCACTTCTACCCAGGAGCAACTC---------C i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 261346 103 - 81552678 I e panTro4.chr17 259572 272 + 82630442 I a score=68463.000000 s hg38.chr17_GL383563v3_alt 283563 31 + 375691 CCTCAGAAGCTCAAAGATTCCCCGGCCTCAT s panTro4.chr17 259844 31 + 82630442 CCTCAGAAGCTCAAAGTCTCCCCGGCCTCAT i panTro4.chr17 I 272 C 0 s ponAbe2.chr17 139587 31 + 73212453 CCTCAGAAGCTCAAAGTTTCCCCAGCCTCAT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 173267 31 + 80904711 CCTCAGAAGCTCAAAGCCTCCCCCGCCTCAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179413 31 + 80997621 CCTCAGAAGCTCAAAGCCTCCCCCGCCTCAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172329 31 + 74645514 CCTCAGAAGCTCAAAGGCTCCCCCGCCTCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 162449 31 + 75148670 CCTCAGAAGCTCAAAGGCTCCCCCACCTCAT i chlSab2.chr16 C 0 I 27 s calJac3.chrUn_GL286409 977389 21 - 1291538 ---------CTCAGAG-CTCCCCAGCCTCAC i calJac3.chrUn_GL286409 I 9 C 0 s canFam3.chr9 15729911 31 - 61074082 TCTTGGAAACTTAAAGGCCTCCTCACCTTGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75904541 3 + 122082543 I e nomLeu3.chr19 261346 103 - 81552678 I a score=753.000000 s hg38.chr17_GL383563v3_alt 283594 6 + 375691 CACCCA s panTro4.chr17 259875 6 + 82630442 GACCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 139618 6 + 73212453 CACCCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 173298 6 + 80904711 GGCAGG i rheMac3.chr16 C 0 I 21 s papAnu2.chr16 172360 6 + 74645514 AGCTCA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977410 6 - 1291538 CACCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904544 4 + 122082543 -GCCA- i mm10.chr11 I 3 C 0 s canFam3.chr9 15729942 6 - 61074082 TGCCCA i canFam3.chr9 C 0 C 0 e chlSab2.chr16 162480 27 + 75148670 I e macFas5.chr16 179444 0 + 80997621 C e nomLeu3.chr19 261346 103 - 81552678 I a score=12837.000000 s hg38.chr17_GL383563v3_alt 283600 8 + 375691 AGCCAGGA s panTro4.chr17 259881 8 + 82630442 AGCCAGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 139624 8 + 73212453 AGCCAGGA i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 179444 7 + 80997621 -GGCAGGA i macFas5.chr16 C 0 I 1 s papAnu2.chr16 172366 8 + 74645514 AGGCagga i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977416 8 - 1291538 CACCAGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904548 8 + 122082543 GGCCAGCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15729948 8 - 61074082 AGCCAAGA i canFam3.chr9 C 0 C 0 e chlSab2.chr16 162480 27 + 75148670 I e rheMac3.chr16 173304 21 + 80904711 I e nomLeu3.chr19 261346 103 - 81552678 I a score=1755.000000 s hg38.chr17_GL383563v3_alt 283608 4 + 375691 CTGA s panTro4.chr17 259889 4 + 82630442 CTGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 139632 4 + 73212453 CCAA i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 179452 4 + 80997621 CCGT i macFas5.chr16 I 1 I 15 s calJac3.chrUn_GL286409 977424 4 - 1291538 CTGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904556 4 + 122082543 TTCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15729956 4 - 61074082 CTAG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 162480 27 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173304 21 + 80904711 I e nomLeu3.chr19 261346 103 - 81552678 I a score=139378.000000 s hg38.chr17_GL383563v3_alt 283612 79 + 375691 GTCCTCAGTCTGCTCAACACCAAGAACCATCTGCAACAGAAACGC--------------CCGGACCAGCCCACAGCTCCAGAGTAGCGTGGGG s panTro4.chr17 259893 79 + 82630442 GTCCTCAGTCTGCTCAACACCAAGAACCATCTGCAACAGAAACGC--------------CCGGACCAGCCCAGAGCTCCAGAGTAGTGTGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 139636 79 + 73212453 GTCCTCAGCCTGCTGAACACCAAGAACCATTTGCAACAGAAACGC--------------CCAGACCAGCCCAGAGCTCCAGAGTAGCGTGGGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 173325 79 + 80904711 GGCCTTCGGCTGCTGAACACCAAGAACCATTTGCAATGGAAACAC--------------CCAGACCAGCCCAGAGCTCCAGGACAGCATGGGG i rheMac3.chr16 I 21 C 0 s macFas5.chr16 179471 79 + 80997621 GGCCTTCGGCTGCTGAACACCAAGAACCATTTGCAATGGAAACAC--------------CCAGACCAGCCCAGAGCTCCAGGACAGCATGGGG i macFas5.chr16 I 15 C 0 s chlSab2.chr16 162507 79 + 75148670 GGCCTTCGGCTGCTGAACACCAAGAACCATTTGCAACGGAAACGC--------------CCAGACCAGCCCAGAGCTCCAGGACAGCATGGGG i chlSab2.chr16 I 27 C 0 s calJac3.chrUn_GL286409 977428 78 - 1291538 GTCCTCAGCCTGCTGAACGATAAGAACCATTT-CAACGGAAATGC--------------CTGGAGCAGCCCAGAGCTTCAGAGTGGCCTGGGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904560 91 + 122082543 GTCTCCTTCCCCCTGGCCTAGAAAGAACACAT--CATAGAAATGTCCTCCAACCAGCCACCAGCCCAGCTCCAGGGCCCTGGGCAGTGGGGGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15729960 70 - 61074082 GTCCTCAGCCTGCTGCAAAATAAGAACAATTTCAAA-----------------------CTGCACCAGCCCAGTGTTCCAGGGTATCACGGGG i canFam3.chr9 C 0 I 73 e papAnu2.chr16 172374 0 + 74645514 C e nomLeu3.chr19 261346 103 - 81552678 I a score=84560.000000 s hg38.chr17_GL383563v3_alt 283691 55 + 375691 A-----------------------CCCA-------CATCCAGCTGAGGTCCTTCCCCAGGACAGCCACTGTTGCCTAAGACATGG-- s panTro4.chr17 259972 55 + 82630442 A-----------------------CCCA-------CATCCAGCTGAGGTCCTTCCCCAGGACGGCCACTGTTGCCTAAGACATGG-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 139715 55 + 73212453 A-----------------------CCCA-------CATCCAGCTGAGGTCCTTCCCCAGGACGGCCAGTGTTGCCTAAGACATGG-- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 173404 54 + 80904711 G------------------------CCA-------CCTCCAGCTGAGGCCCCTCCCCGGGACGGTCACTGCTGCCTCAGACATGG-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179550 54 + 80997621 G------------------------CCA-------CCTCCAGCTGAGGCCCCTCCCCGGGACGGTCACTGCTGCCTCAGACATGG-- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162586 54 + 75148670 G------------------------CCA-------CCTCCAGCTGAGGCCCCTCCCCGGGACGGCCACTGCTGCCGAAGACACGG-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977506 54 - 1291538 A-----------------------CCCA-------CTGCCAGCTGAGGTCC-TCCCCGGGACGGCCATTGTTGCCTAAGACGTGG-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904651 85 + 122082543 AGACAAGTCTAGAAGAACATCTCCCCCACAGTGGTCACCCAGCTGAGGCCCTCCCCTGGGCCAGTC--CGTTGCCTAGGCAATGGCT i mm10.chr11 C 0 C 0 e canFam3.chr9 15730030 73 - 61074082 I e papAnu2.chr16 172374 0 + 74645514 C e nomLeu3.chr19 261346 103 - 81552678 I a score=146045.000000 s hg38.chr17_GL383563v3_alt 283746 101 + 375691 CTCCAAGGAGCACCT----GTACTAACCGTTGCACAGCCA-CACCAGCAG-CGGCCTCTGCAG-CACAGGCCCTGGACTGTCCCAGGGGAAG-----TGGGCCAGGCTCTGTG s panTro4.chr17 260027 101 + 82630442 CTCCAAGGAGCAGCT----GTACTAACCGTTGCACAGCCA-CACCAGCAG-CGGCCTCTGCGG-CACAGGCCCTGGACTGTCACAGGGGAAG-----TAGGCCAGGCTCTGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 139770 105 + 73212453 CTCCAAGGAGCAGGTCCAAGTACTCACCGTTGCACAGCCA-GACCAGCAG-TGGCCGTTGTGG-CACAGGCCCTGGACTGTCCCAGGGGAAG-----TAGGCCAGGCTCTGTG i ponAbe2.chr17 C 0 M 6799 s rheMac3.chr16 173458 101 + 80904711 CTCCAAGGGGCAGCT----GGATTAACCG-TGAACAGCCA-GACCAGCAG-CAGCCTCTGTGGCCACAGGCCCTGGATGGTCGCAGGGAAAG-----CAGGCCGGGCTTCCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179604 101 + 80997621 CTCCAAGGGGCAGCT----GGATTAACCG-TGAACAGCCA-GACCAGCAG-CAGCCTCTGTGGCCACAGGCCCTGGATGGTCGCAGGGAAAG-----CAGGCCGGGCTTCCTG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162640 101 + 75148670 CTCCAAGGGGCAGCT----GGATTAACCG-TGAACAGCCA-GACCAGCAG-CAGCCTCTGTGGGCACAGGCCCCGGACGGTCGCAGGGAAAG-----CAGGCCGGGCTTCCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977560 100 - 1291538 CCCTAGGGAGCAGTT----GTGTTAGCTGCTGCACAGCCA-GGCCAGCAG-CTGCCTCTGTGG-CCCAGGCCCTGGACTGTCCCAGGGGAAG-----CAGGCC-GGCTCTGCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904736 98 + 122082543 CTCTGAGGAGCAGCT---GGTATTAACTCTTTGATAACCAGGGTCAGCAG-CTCGCCCTATGA-CAGGG-----GAAAGGTCCCGTGGGATGAGCTATGAGACAGCCT----- i mm10.chr11 C 0 C 0 s canFam3.chr9 15730103 88 - 61074082 CTCCAAGGACCCTTT----G-------------GCAGTCA-GGACAGCAGCCTGCCCCAATAG-TAGACGTCTTAGACTTTTCTAGAGGAAG------AGACAAGGCTCTGCT i canFam3.chr9 I 73 C 0 e papAnu2.chr16 172374 0 + 74645514 C e nomLeu3.chr19 261346 103 - 81552678 I a score=179831.000000 s hg38.chr17_GL383563v3_alt 283847 185 + 375691 CCTCTTCA--------------------------------TGGTCCCCTATAGCTGGAATATTTACCACAGGCCAGGCTCTGTGCCTCTCCACAGGCCCCTATACCTGGAATATTCACAGCA---GCTGTGGGGTTGAGAGACAGGAGGAGGAAGCACACTGCC--AGCTCCCGTTCTCCCAGGCAGGAG---------------TCA----------------CTGCCCGAGTCCTGCAAGTTGGCCATTCC s panTro4.chr17 260128 185 + 82630442 CCTCTTCA--------------------------------TGGTCCCCTATATCTGGAATATTTACCACAGGCCAGGCTCTGTGCCTCTCCACAGGCCCCTATAGCGGGAATATTCACAGCA---GCTGTGGGGTTGAGAGACAGGAGGAGGAAGTACACTGCC--AGCTCCCGTTCTCCCAGGCAGGAG---------------TCA----------------CTGCCCGAGTCCTGCAAGTTGGCCATTCC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 173559 184 + 80904711 GACCTTCA--------------------------------CGGTCCCCTCTATCTGGACTATCTACCGCAGGCCAGGCTCTGTGCCTCTCCACAGTCCCCTGTATCTGGAATATTCACAGCA---GCTGTGGGGTTGAGAGACA-GAGGAGGAAATAGACTGCC--AGGTCCCGTTCTGCCAGGCAGGAG---------------TCA----------------CTGCCCGAGTCCTGGAAGTCGGCCATTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179705 184 + 80997621 GACCTTCA--------------------------------CAGTCCCCTCTATCTGGACTATCTACCGCAGGCCAGGCTCTGTGCCTCTCCACAGTCCCCTGTATCTGGAATATTCACAGCA---GCTGTGGGGTTGAGAGACA-GAGGAGGAAATAGACTGCC--AGGTCCCGTTCTGCCAGGCGGGAG---------------TCA----------------CTGCCCGAGTCCTGGAAGTCGGCCATTCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162741 215 + 75148670 GACCTCCATATCTGGACTATCTACCGCAGGCCAGGCTTCCTGGACCTCTGTATCTGGACTATCTACCGCAGGCCGGGCTCCA-GCCCCTCCACAGTCCCCTGTAGCTGGAATATTCACAGCA---GCTGTGGGGTTGAGAGACA-GAGGAGGAAACAGACTGCC--AGGTCCCGTTCTGCCAGGCAGGAG---------------TCA----------------CTGCCCGAGTCCTGGAAGTCGGCCATTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977660 146 - 1291538 ------------------------------------------------------------------------------------CCTCTTTATGATCCCCTATATCTGGAATATTCACAGCA---GCTGTGAGGTTGAGAGGCA-GAGGAGGAAACAGGCTGCC--AGGTCCCGTTCTCCCA-GCAGGAGTCATAAAACATAACCTCA----------------CCACCAAAGCCCTGGAAGCTGGACCTTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904834 146 + 122082543 ----------------------------------------------------------------------------------------TTCGTGGTCCTACAATACTGAACTCTTTAGAGTA---GTGGTGAGCTGGAGAGGCAGGAGGAGCAAACGGGCTGCTGGAGTCACAGGGACAGAAAGTAGAAGGCACAAAACA-----TCA---------GCC--ACCTGCCCCATTCCTGGGAGCAAAGCATCCC i mm10.chr11 C 0 C 0 s canFam3.chr9 15730191 151 - 61074082 --CCTTCA---------------------------------------------------------------------------------TCATGGTCCTATAAACCTG-AACATTTACAGCATTTACAGTGGGGTTGAGGGGCAGAGAGTGGAAACAGGCTGCT--GGGCCCCATTCTCCCAGGCAGAAG---------------TCACAAAGTATAACCTAATCTACCCAAGGGCTGGGAGCAAGACATTC- i canFam3.chr9 C 0 C 0 e papAnu2.chr16 172374 0 + 74645514 C e nomLeu3.chr19 261346 103 - 81552678 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=3600.000000 s hg38.chr17_GL383563v3_alt 284032 1 + 375691 C s panTro4.chr17 260313 1 + 82630442 C i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261449 1 - 81552678 C i nomLeu3.chr19 I 103 C 0 s rheMac3.chr16 173743 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179889 1 + 80997621 C i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162956 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977806 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904980 1 + 122082543 C i mm10.chr11 C 0 C 0 s canFam3.chr9 15730342 1 - 61074082 C i canFam3.chr9 C 0 C 0 e papAnu2.chr16 172374 0 + 74645514 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=2548.000000 s hg38.chr17_GL383563v3_alt 284033 1 + 375691 A s panTro4.chr17 260314 1 + 82630442 A i panTro4.chr17 C 0 I 91 s nomLeu3.chr19 261450 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 173744 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179890 1 + 80997621 A i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162957 1 + 75148670 A i chlSab2.chr16 C 0 C 0 s mm10.chr11 75904981 1 + 122082543 A i mm10.chr11 C 0 C 0 s canFam3.chr9 15730343 1 - 61074082 A i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 977807 0 - 1291538 C e papAnu2.chr16 172374 0 + 74645514 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=12507.000000 s hg38.chr17_GL383563v3_alt 284034 11 + 375691 AGTCTCTGTAC s panTro4.chr17 260406 11 + 82630442 AGTCCCTGTGC i panTro4.chr17 I 91 C 0 s nomLeu3.chr19 261451 11 - 81552678 AGTCCCTTTAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 173745 11 + 80904711 AGCCTGTGTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179891 11 + 80997621 AGCCTGTGTCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162958 11 + 75148670 AGCCTCTGTGT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75904982 11 + 122082543 GGTTCCTACAC i mm10.chr11 C 0 C 0 s canFam3.chr9 15730344 11 - 61074082 AGTCCCTTTGC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 977807 0 - 1291538 C e papAnu2.chr16 172374 0 + 74645514 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=654.000000 s hg38.chr17_GL383563v3_alt 284045 2 + 375691 CC-- s panTro4.chr17 260417 2 + 82630442 CC-- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261462 2 - 81552678 CC-- i nomLeu3.chr19 C 0 T 13 s rheMac3.chr16 173756 2 + 80904711 CC-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179902 2 + 80997621 CC-- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162969 2 + 75148670 CC-- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15730355 4 - 61074082 CTGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e papAnu2.chr16 172374 0 + 74645514 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=14800.000000 s hg38.chr17_GL383563v3_alt 284047 17 + 375691 CACCTCCATTGACCTGT s panTro4.chr17 260419 17 + 82630442 CACCTCCACTGACCTGT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 173758 17 + 80904711 CACCTCCACTGACCTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179904 17 + 80997621 CACCTCCACTGACCTGT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162971 17 + 75148670 CACCTCCACTCACCTGT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15730359 17 - 61074082 TGCCTATGTTAGTATCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e papAnu2.chr16 172374 0 + 74645514 C e nomLeu3.chr19 261464 13 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=1911.000000 s hg38.chr17_GL383563v3_alt 284064 1 + 375691 A s panTro4.chr17 260436 1 + 82630442 A i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261451 1 - 81552678 A i nomLeu3.chr19 T 13 C 0 s rheMac3.chr16 173775 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 179921 1 + 80997621 A i macFas5.chr16 C 0 C 0 s chlSab2.chr16 162988 1 + 75148670 A i chlSab2.chr16 C 0 I 92 s canFam3.chr9 15730376 1 - 61074082 A i canFam3.chr9 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e papAnu2.chr16 172374 0 + 74645514 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=22005.000000 s hg38.chr17_GL383563v3_alt 284065 36 + 375691 GTCT-----CTAT-----GCCCCCACCTCCATTGACCTGTAGTCCC---- s panTro4.chr17 260437 36 + 82630442 GTCC-----CTGT-----GCCCCCACCTCCATTGACCTGTAGTCCC---- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261452 36 - 81552678 GTCC-----CTTT-----ACCCCCACCTCCACTGACCTGCAGTCCC---- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 173776 33 + 80904711 GTCC-----CCGT--------CCCACCTCCACCGACCTGTAGTCCC---- i rheMac3.chr16 C 0 I 1103 s macFas5.chr16 179922 33 + 80997621 GTCC-----CCGT--------CCCACCTCCACTGACCTGTAGTCCC---- i macFas5.chr16 C 0 C 0 s canFam3.chr9 15730377 47 - 61074082 GTTCAGGGACTATGGAAGGTGCCCACCCTTAT---CCTGTCATCCAGGCC i canFam3.chr9 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=-2755.000000 s hg38.chr17_GL383563v3_alt 284101 5 + 375691 TATAC---- s panTro4.chr17 260473 5 + 82630442 TGGGC---- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261488 5 - 81552678 TGTGC---- i nomLeu3.chr19 C 0 T 31 s macFas5.chr16 179955 4 + 80997621 CGTG----- i macFas5.chr16 C 0 C 0 s canFam3.chr9 15730424 5 - 61074082 ----CCTCC i canFam3.chr9 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=-2133.000000 s hg38.chr17_GL383563v3_alt 284106 3 + 375691 TCC-- s panTro4.chr17 260478 3 + 82630442 CCC-- i panTro4.chr17 C 0 T 121 s nomLeu3.chr19 261462 3 - 81552678 CCC-- i nomLeu3.chr19 T 31 I 1 s macFas5.chr16 179959 2 + 80997621 TC--- i macFas5.chr16 C 0 C 0 s canFam3.chr9 15730429 3 - 61074082 --CAC i canFam3.chr9 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=11790.000000 s hg38.chr17_GL383563v3_alt 284109 27 + 375691 ACGTCCATTGACCTGTAGTCCCTGTGC s panTro4.chr17 260360 27 + 82630442 ACCTCCATTGACCTATAGTCCCTGTGC i panTro4.chr17 T 121 C 0 s nomLeu3.chr19 261466 26 - 81552678 ACCTCCACTGACCTGCAGTCCCTGTG- i nomLeu3.chr19 I 1 C 0 s macFas5.chr16 179961 26 + 80997621 ACCTCCACTGTCCTGTAGTCCCCGTC- i macFas5.chr16 C 0 C 0 s canFam3.chr9 15730432 27 - 61074082 ATCTCCACTGTTCTTGGGACCCTTCAC i canFam3.chr9 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=20707.000000 s hg38.chr17_GL383563v3_alt 284136 60 + 375691 CCCACCTCCACTG-ACAGGCAGTCTCTGTGCCCCACCTCCACTGACAGGCAGTCTCTGTGC s panTro4.chr17 260387 60 + 82630442 CCCACCTCCACTG-ACCTGTAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCCCTGTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261492 58 - 81552678 -CCACCTCCACTGTACCTGCAGTCCCTGCG--CCACCTCCACTGACCTGCAGTCCCTGTGC i nomLeu3.chr19 C 0 T 86 s macFas5.chr16 179987 56 + 80997621 -CCACCTCCACCG-TCCTGTGGTCCCCGTG--TCACCTCCACTGTCCTGTAGTCCCCGTG- i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=-31.000000 s hg38.chr17_GL383563v3_alt 284196 1 + 375691 T s panTro4.chr17 260447 1 + 82630442 C i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180043 0 + 80997621 C e nomLeu3.chr19 261550 86 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=12783.000000 s hg38.chr17_GL383563v3_alt 284197 28 + 375691 CC-ACCTCCACTGACCTGTAGTCCCTGTG s panTro4.chr17 260448 29 + 82630442 CCCACCTCCATTGACCTGTAGTCCCTGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261464 28 - 81552678 CC-ACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 T 86 T 41 s macFas5.chr16 180043 28 + 80997621 TC-ACCTCCACTGACCTGTAGTCCCCGTG i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=3920.000000 s hg38.chr17_GL383563v3_alt 284225 20 + 375691 CCCCACCTCCCTTGACCTGT s panTro4.chr17 260477 20 + 82630442 CCCCACCTCCATTGACCTGT i panTro4.chr17 C 0 C 0 s macFas5.chr16 180071 18 + 80997621 --TCACCTCCACTGTCCTGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e nomLeu3.chr19 261492 41 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=23109.000000 s hg38.chr17_GL383563v3_alt 284245 73 + 375691 AGTCCCTGTAACTCCACCTCCATTGACCTGTAGTCTCTGTGACTCCACCTCCACTG-ACCTGTAGTCCCTGTG-C s panTro4.chr17 260497 73 + 82630442 AGTCCATGTG-CCCCACCTCCATTGACCTGTAGTCCCTGTGACCCCACCTCCACTG-ACCTGTAGTCCCTGTGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261451 71 - 81552678 AGTCCCTTTACCCCCACCTCCACTGACCTGCAGTCCCTGTG---CCACCTCCACTGTACCTGCAGTCCCTGCG-C i nomLeu3.chr19 T 41 I 28 s macFas5.chr16 180089 65 + 80997621 AGTCCCCG---TCCCACCTCCACTGTCCTGTAGTCCCCGTG---TCACCTCCACTG-TCCTGTAGTCCCCGT--- i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=46508.000000 s hg38.chr17_GL383563v3_alt 284318 118 + 375691 CCCACCTCCATTGACCTGTAGTCTCTGTG-CCCCACCTCCATTGACCTGTAGTCTCTGTGCTCCACCTCCATTGACCTGTAGTCTCTGTG-CTCCACCTCCACTGACCTGTAGTCCCTGT s panTro4.chr17 260570 120 + 82630442 CCCACCTCCATTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCATGTGCCCCACCTCCACTGACCTGTACTCCCTGTGCCCCCACCTGCATTGACCTGTAGTCCCTGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261550 110 - 81552678 --CACCTCCACTGACCTGCAGTCCCTGCG---CCACCTCCACTGACCTGCAGTCCCTGCG--CCACCTCCACTGACCTGCAGTCCCTGCG---CCACCTCCACTGACCTGTAGTCCCTGC i nomLeu3.chr19 I 28 C 0 s macFas5.chr16 180154 112 + 80997621 CCCACCTCCACTGACCTGTAGTCCCCGTG---TCACCTCCACTGACCTGTAGTCCCCGTG--TCACCTCCACTGACCTGTAGTCCCCGTG---TCACCTCCACTGTCCTGTAGTCCCCGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=-460.000000 s hg38.chr17_GL383563v3_alt 284436 2 + 375691 GC s panTro4.chr17 260690 2 + 82630442 GC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261660 1 - 81552678 G- i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180266 0 + 80997621 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=11978.000000 s hg38.chr17_GL383563v3_alt 284438 30 + 375691 CCCACCTCCATTGACCTGCAGTCTCTGTAC s panTro4.chr17 260692 30 + 82630442 CCCACCTCCATTGACCTGTAGTCCATGTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261661 29 - 81552678 -CCACCTCCACTGACCTGCAGTCCCTGTGC i nomLeu3.chr19 C 0 I 113 s macFas5.chr16 180266 29 + 80997621 CCCACCTCCACTGTCCTGTAGTCCCCGTG- i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=10249.000000 s hg38.chr17_GL383563v3_alt 284468 33 + 375691 TCCACGTCCATTGACCTGTAGTCCCTGTGACTT s panTro4.chr17 260722 32 + 82630442 CCCACCTCCACTGACCTGTAGTCCATGTG-CCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261803 32 - 81552678 GCCACCTCCACTGACCTGCAGTCCCTGCG-CCT i nomLeu3.chr19 I 113 T 145 s macFas5.chr16 180295 29 + 80997621 -TCACCTCCACTGACCTGTAGTCCCCGTG-T-- i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=11422.000000 s hg38.chr17_GL383563v3_alt 284501 22 + 375691 CACCTCCATTGACCTGTAGTCC s panTro4.chr17 260754 22 + 82630442 CACCTCCAGTGACCTGTAGTCC i panTro4.chr17 C 0 T 151 s nomLeu3.chr19 261690 22 - 81552678 CACCTCCACTGACCTGCAGTCC i nomLeu3.chr19 T 145 C 0 s macFas5.chr16 180324 22 + 80997621 CACCTCCACTGACCTGTAGTCC i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=11897.000000 s hg38.chr17_GL383563v3_alt 284523 31 + 375691 CTGTGCTCCACCTCCATTGACCTGTAGTCTC s panTro4.chr17 260625 31 + 82630442 ATGTGCCCCACCTCCACTGACCTGTACTCCC i panTro4.chr17 T 151 C 0 s nomLeu3.chr19 261712 29 - 81552678 CTGTG--CCACCTCCACTGACCTGTAGTCCC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180346 29 + 80997621 CTGTG--TCACCTCCACTGTCCTGTAGTCCC i macFas5.chr16 C 0 T 416 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=6078.000000 s hg38.chr17_GL383563v3_alt 284554 36 + 375691 TGTGACCCCACCTCCATTGACCTGTAGTCCCTGTGA s panTro4.chr17 260656 35 + 82630442 TGTGCCCCCACCTGCATTGACCTGTAGTCCCTG-GG i panTro4.chr17 C 0 T 275 s nomLeu3.chr19 261741 33 - 81552678 TGCG---CCACCTCCACTGACCTGTAGTCCCTGTGC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7953.000000 s hg38.chr17_GL383563v3_alt 284590 30 + 375691 CCCCACCTCCATTGACCTGTAGTCCCTGTG s panTro4.chr17 260416 30 + 82630442 CCCCACCTCCACTGACCTGTAGTCCCTGTG i panTro4.chr17 T 275 C 0 s nomLeu3.chr19 261774 30 - 81552678 CCCCACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 C 0 I 28 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7225.000000 s hg38.chr17_GL383563v3_alt 284620 29 + 375691 ACCCCACCTCCATTGACCTGTAGTCCCTG s panTro4.chr17 260446 29 + 82630442 CCCCCACCTCCATTGACCTGTAGTCCCTG i panTro4.chr17 C 0 I 180 s nomLeu3.chr19 261832 29 - 81552678 CCTCCACCTCCACTGACCTGCAGTCCCTG i nomLeu3.chr19 I 28 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=1892.000000 s hg38.chr17_GL383563v3_alt 284649 26 + 375691 TACTCCACGTCCATTGACCTGTAGTC s nomLeu3.chr19 261861 26 - 81552678 TGCCCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 C 0 T 61 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260475 180 + 82630442 I a score=4464.000000 s hg38.chr17_GL383563v3_alt 284675 60 + 375691 TCTGTG-CTCCACCTCCATTGACCTGTAGTCTCTGTGCTCCACCTCCATTGACCTGTAGTC s nomLeu3.chr19 261826 61 - 81552678 CCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 T 61 T 83 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260475 180 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 284735 9 + 375691 TCTGTGACC e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261887 83 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260475 180 + 82630442 I a score=1966.000000 s hg38.chr17_GL383563v3_alt 284744 23 + 375691 CCACCTCCATTGACCTGTAGTCC s nomLeu3.chr19 261804 23 - 81552678 CCACCTCCACTGACCTGCAGTCC i nomLeu3.chr19 T 83 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260475 180 + 82630442 I a score=13932.000000 s hg38.chr17_GL383563v3_alt 284767 59 + 375691 CTGTGCTCC-ACCTCCATTGACCTGTAGTCCCTGTGCCCCACCTCCATTGACCTGTAGTC s panTro4.chr17 260655 60 + 82630442 CTGTGCCCCCACCTGCATTGACCTGTAGTCCCTGGGCCCCACCTCCATTGACCTGTAGTC i panTro4.chr17 I 180 C 0 s nomLeu3.chr19 261827 60 - 81552678 CTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 C 0 T 30 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7361.000000 s hg38.chr17_GL383563v3_alt 284826 31 + 375691 TCTGTGCTCCACCTCCATTGACCAGTAGTCC s panTro4.chr17 260715 31 + 82630442 CATGTGCCCCACCTCCACTGACCTGTAGTCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261857 31 - 81552678 CCTGTGCCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 T 30 T 148 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6217.000000 s hg38.chr17_GL383563v3_alt 284857 29 + 375691 CTGTGCCCCACCTCCATTGACCTGTAGTC s panTro4.chr17 260746 29 + 82630442 ATGTGCCCCACCTCCAGTGACCTGTAGTC i panTro4.chr17 C 0 T 151 s nomLeu3.chr19 261740 27 - 81552678 --CTGCGCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 T 148 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7009.000000 s hg38.chr17_GL383563v3_alt 284886 36 + 375691 TCTGTG-CTCCACCTCCATTGACCAGTAGTCCCTGTG s panTro4.chr17 260624 36 + 82630442 CATGTG-CCCCACCTCCACTGACCTGTACTCCCTGTG i panTro4.chr17 T 151 T 300 s nomLeu3.chr19 261767 37 - 81552678 CCTGTGCCCCCACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=-260.000000 s hg38.chr17_GL383563v3_alt 284922 4 + 375691 CCCC s nomLeu3.chr19 261804 2 - 81552678 CC-- i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260660 300 + 82630442 T a score=6520.000000 s hg38.chr17_GL383563v3_alt 284926 27 + 375691 ACCTCCATTGACCTGTAGTCTCTGTGC s panTro4.chr17 260360 27 + 82630442 ACCTCCATTGACCTATAGTCCCTGTGC i panTro4.chr17 T 300 C 0 s nomLeu3.chr19 261806 27 - 81552678 ACCTCCACTGACCTGCAGTCCCTGCGC i nomLeu3.chr19 C 0 T 198 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=2725.000000 s hg38.chr17_GL383563v3_alt 284953 33 + 375691 TCCACCTCCATTGAACTGTAGTCCCTGTGCCCC s panTro4.chr17 260387 33 + 82630442 CCCACCTCCACTGACCTGTAGTCCCTGTGCCCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261833 198 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=25858.000000 s hg38.chr17_GL383563v3_alt 284986 128 + 375691 ACCTCCATTGACCTGTAGTCCCTGTGACTCCACCTCCATTGACCTGTAGTCTCTGTGCTCCACCTCCACTGACCTGTGGTCTCTGTACTCCACCTCCATTGACCTGTAGTCTCTGTGACCCCACCTTG s panTro4.chr17 260420 128 + 82630442 ACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGGGCCCCACCTCCATTGACCTGTAGTCCATGTGCCCCACCTCCATTGACCTGTAGTCCCTGTGACCCCACCTCC i panTro4.chr17 C 0 T 31 s nomLeu3.chr19 261635 118 - 81552678 ACCTCCACTGACCTGTAGTCCCTGCG---CCACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACCTGTAGTCCCTGCG---CCACCTCC i nomLeu3.chr19 T 198 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6558.000000 s hg38.chr17_GL383563v3_alt 285114 25 + 375691 ATTGACCTGTAGTCCCTGTGCCCCC s panTro4.chr17 260517 25 + 82630442 ATTGACCTGTAGTCCCTGTGACCCC i panTro4.chr17 T 31 C 0 s nomLeu3.chr19 261753 25 - 81552678 ACTGACCTGTAGTCCCTGTGCCCCC i nomLeu3.chr19 C 0 T 143 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=13559.000000 s hg38.chr17_GL383563v3_alt 285139 58 + 375691 ACCTCCACTGACCTGTAGTCTCTGTGTCCCCACCTCTACTGACCTGTAGTCTCTGTGC s panTro4.chr17 260542 58 + 82630442 ACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261635 55 - 81552678 ACCTCCACTGACCTGTAGTCCCTGCG---CCACCTCCACTGACCTGCAGTCCCTGTGC i nomLeu3.chr19 T 143 T 227 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=2302.000000 s hg38.chr17_GL383563v3_alt 285197 31 + 375691 TCCCACCTCCATTGACCTGTAGTCTCTGTGA s panTro4.chr17 260600 31 + 82630442 CCCCACCTCCATTGACCTGTAGTCCATGTGC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261690 227 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7447.000000 s hg38.chr17_GL383563v3_alt 285228 29 + 375691 CCCACCTCCATTGACCTGTAGTCCCTGTG s panTro4.chr17 260631 29 + 82630442 CCCACCTCCACTGACCTGTACTCCCTGTG i panTro4.chr17 C 0 T 153 s nomLeu3.chr19 261463 29 - 81552678 CCCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 T 227 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=12775.000000 s hg38.chr17_GL383563v3_alt 285257 61 + 375691 CTCCACCTCCATTG-ACCTGTAGTCCCTGTG-CTCCACCTCCACTGACCTGTAGCCTCTGTGC s panTro4.chr17 260507 62 + 82630442 CCCCACCTCCATTG-ACCTGTAGTCCCTGTGACCCCACCTCCACTGACCTGTAGTCCCTGTGC i panTro4.chr17 T 153 C 0 s nomLeu3.chr19 261492 58 - 81552678 --CCACCTCCACTGTACCTGCAGTCCCTGCG---CCACCTCCACTGACCTGCAGTCCCTGTGC i nomLeu3.chr19 C 0 T 28 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=69.000000 s hg38.chr17_GL383563v3_alt 285318 2 + 375691 TC s panTro4.chr17 260569 2 + 82630442 CC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261550 28 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=300.000000 s hg38.chr17_GL383563v3_alt 285320 1 + 375691 C s panTro4.chr17 260571 1 + 82630442 C i panTro4.chr17 C 0 T 212 s nomLeu3.chr19 261522 1 - 81552678 C i nomLeu3.chr19 T 28 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=10580.000000 s hg38.chr17_GL383563v3_alt 285321 46 + 375691 ACCTCCATTGACCTGTAGTCCCTGTGCTCCACCTCCATTGACCTGT s panTro4.chr17 260360 46 + 82630442 ACCTCCATTGACCTATAGTCCCTGTGCCCCACCTCCACTGACCTGT i panTro4.chr17 T 212 T 91 s nomLeu3.chr19 261523 44 - 81552678 ACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACCTGC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=29270.000000 s hg38.chr17_GL383563v3_alt 285367 132 + 375691 AGTCCCTGTGCTCCACCTCCACTAACCTGCAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCTCTGTGCCCCACCTCCATTGACCTGTAGTCCCTGTGATCCACCTCCACTGACCTGTAGTCCCTGTGC s panTro4.chr17 260315 132 + 82630442 AGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTATAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCCCTGTGC i panTro4.chr17 T 91 C 0 s nomLeu3.chr19 261567 123 - 81552678 AGTCCCTGCG--CCACCTCCACTGACCTGCAGTCCCTGCG---CCACCTCCACTGACCTGCAGTCCCTGCG--CCACCTCCACTGACCTGTAGTCCCTGCG--CCACCTCCACTGACCTGCAGTCCCTGTGC i nomLeu3.chr19 C 0 I 84 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=4694.000000 s hg38.chr17_GL383563v3_alt 285499 17 + 375691 CCCCACCTCCATTGACC s panTro4.chr17 260447 17 + 82630442 CCCCACCTCCATTGACC i panTro4.chr17 C 0 I 122 s nomLeu3.chr19 261774 17 - 81552678 CCCCACCTCCACTGACC i nomLeu3.chr19 I 84 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=2988.000000 s hg38.chr17_GL383563v3_alt 285516 13 + 375691 TGTAGTCTCTGTG s panTro4.chr17 260586 13 + 82630442 TGTAGTCCCTGTG i panTro4.chr17 I 122 C 0 s nomLeu3.chr19 261791 13 - 81552678 TGCAGTCCCTGCG i nomLeu3.chr19 C 0 I 28 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=300.000000 s hg38.chr17_GL383563v3_alt 285529 1 + 375691 C s panTro4.chr17 260599 1 + 82630442 C i panTro4.chr17 C 0 T 31 s nomLeu3.chr19 261832 1 - 81552678 C i nomLeu3.chr19 I 28 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=2294.000000 s hg38.chr17_GL383563v3_alt 285530 30 + 375691 TTCCACCTCCATTGACCTTTAGTCCCTGTG s nomLeu3.chr19 261833 30 - 81552678 CTCCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 C 0 T 59 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260600 31 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 285560 1 + 375691 A e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261863 59 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260600 31 + 82630442 T a score=69.000000 s hg38.chr17_GL383563v3_alt 285561 2 + 375691 CT s panTro4.chr17 260569 2 + 82630442 CC i panTro4.chr17 T 31 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261863 59 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=14714.000000 s hg38.chr17_GL383563v3_alt 285563 59 + 375691 CCACCTCCATTGACCTGTAGTCCCTGTGACCCCACCTCCATTGACCTGTAGTCCCTGTG s panTro4.chr17 260571 59 + 82630442 CCACCTCCATTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCATGTG i panTro4.chr17 C 0 T 30 s nomLeu3.chr19 261804 59 - 81552678 CCACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 T 59 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6986.000000 s hg38.chr17_GL383563v3_alt 285622 25 + 375691 CCCCACCTCCATTGACCTGTAGTCC s panTro4.chr17 260600 25 + 82630442 CCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 T 30 C 0 s nomLeu3.chr19 261863 25 - 81552678 CCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 C 0 T 232 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7457.000000 s hg38.chr17_GL383563v3_alt 285647 35 + 375691 CTGTGCTCCACCTCCATTGACCTGTACTCCCTGTG s panTro4.chr17 260625 35 + 82630442 ATGTGCCCCACCTCCACTGACCTGTACTCCCTGTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261656 33 - 81552678 --CTGCGCCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 T 232 I 56 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=-45.000000 s hg38.chr17_GL383563v3_alt 285682 3 + 375691 ACT s panTro4.chr17 260660 3 + 82630442 CCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261689 56 - 81552678 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=3344.000000 s hg38.chr17_GL383563v3_alt 285685 14 + 375691 CCACCTCCATTGAC s panTro4.chr17 260663 14 + 82630442 CCACCTGCATTGAC i panTro4.chr17 C 0 T 104 s nomLeu3.chr19 261745 14 - 81552678 CCACCTCCACTGAC i nomLeu3.chr19 I 56 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=1359.000000 s hg38.chr17_GL383563v3_alt 285699 19 + 375691 CTCTAATCCCTGTGTCCCC s nomLeu3.chr19 261759 19 - 81552678 CTGTAGTCCCTGTGCCCCC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260677 104 + 82630442 T a score=6482.000000 s hg38.chr17_GL383563v3_alt 285718 26 + 375691 ACCTCCATTGACCTGTAGTCTCTGTG s panTro4.chr17 260573 26 + 82630442 ACCTCCATTGACCTGTAGTCCCTGTG i panTro4.chr17 T 104 C 0 s nomLeu3.chr19 261778 26 - 81552678 ACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 C 0 I 1 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=2402.000000 s hg38.chr17_GL383563v3_alt 285744 32 + 375691 CTCCCACCTCCATTGACCTGTAGTCTCTTTGC s panTro4.chr17 260599 32 + 82630442 CCCCCACCTCCATTGACCTGTAGTCCATGTGC i panTro4.chr17 C 0 T 93 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 1 - 81552678 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 285776 3 + 375691 TCC e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 1 - 81552678 I e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260631 93 + 82630442 T a score=3967.000000 s hg38.chr17_GL383563v3_alt 285779 58 + 375691 CACCTCCATTGACCTCTAGTCCCTGTGACTCCACCTCCTTTTACCTGTAGTCTCTGTG s nomLeu3.chr19 261805 58 - 81552678 CACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 I 1 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260631 93 + 82630442 T a score=338.000000 s hg38.chr17_GL383563v3_alt 285837 2 + 375691 CT s panTro4.chr17 260538 2 + 82630442 CC i panTro4.chr17 T 93 C 0 s nomLeu3.chr19 261863 2 - 81552678 CC i nomLeu3.chr19 C 0 T 147 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=100.000000 s hg38.chr17_GL383563v3_alt 285839 1 + 375691 C s panTro4.chr17 260540 1 + 82630442 C i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261865 147 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=21086.000000 s hg38.chr17_GL383563v3_alt 285840 89 + 375691 CACCTCCATTGACCTGTAGTCCCTGTGTCCCCACCTCTATTGACCTGTAGTCTCTGTGCTCCCACCTCCATTGACCTGTAGTCTCTGTG s panTro4.chr17 260541 89 + 82630442 CACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCATGTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261718 86 - 81552678 CACCTCCACTGACCTGTAGTCCCTGCG---CCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 T 147 T 87 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=170.000000 s hg38.chr17_GL383563v3_alt 285929 3 + 375691 ACC s panTro4.chr17 260630 2 + 82630442 -CC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 87 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=12072.000000 s hg38.chr17_GL383563v3_alt 285932 60 + 375691 CCACCTCCATTGACCTGTAGTCCCTGTGACTCCACCTACATTGACCTGTAGTCCCTGTGT s panTro4.chr17 260632 59 + 82630442 CCACCTCCACTGACCTGTACTCCCTGTGCCCCCACCTGCATTGACCTGTAGTCCCTG-GG i panTro4.chr17 C 0 T 61 s nomLeu3.chr19 261717 57 - 81552678 CCACCTCCACTGACCTGTAGTCCCTGCG---CCACCTCCACTGACCTGTAGTCCCTGTGC i nomLeu3.chr19 T 87 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7279.000000 s hg38.chr17_GL383563v3_alt 285992 31 + 375691 CCCCACCTCTATTGACCTGTAGTCTCTGTGC s panTro4.chr17 260630 31 + 82630442 CCCCACCTCCACTGACCTGTACTCCCTGTGC i panTro4.chr17 T 61 C 0 s nomLeu3.chr19 261774 31 - 81552678 CCCCACCTCCACTGACCTGCAGTCCCTGCGC i nomLeu3.chr19 C 0 T 59 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=169.000000 s hg38.chr17_GL383563v3_alt 286023 3 + 375691 TCC s panTro4.chr17 260661 3 + 82630442 CCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261805 59 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6247.000000 s hg38.chr17_GL383563v3_alt 286026 25 + 375691 CACCTGCATTGACCTGTAGTCTCTG s panTro4.chr17 260664 25 + 82630442 CACCTGCATTGACCTGTAGTCCCTG i panTro4.chr17 C 0 T 151 s nomLeu3.chr19 261746 25 - 81552678 CACCTCCACTGACCTGTAGTCCCTG i nomLeu3.chr19 T 59 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=2472.000000 s hg38.chr17_GL383563v3_alt 286051 33 + 375691 TGACCCCACCTCTATTGACCTGTAGTCCCTGTG s nomLeu3.chr19 261771 33 - 81552678 TGCCCCCACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260689 151 + 82630442 T a score=20317.000000 s hg38.chr17_GL383563v3_alt 286084 87 + 375691 CTCCACCTCCATTGACCTGTAGTCTCTGTGCTTCCACCTCCATTGACCTGTAGTCCCTGTGACTCCACCTCCATTGACCTGTATTCC s panTro4.chr17 260538 87 + 82630442 CCCCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 T 151 C 0 s nomLeu3.chr19 261804 84 - 81552678 --CCACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTG-CCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 C 0 T 30 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7825.000000 s hg38.chr17_GL383563v3_alt 286171 30 + 375691 CTGTGCCCCACCTCCACTGACCTGTAGTCC s panTro4.chr17 260625 30 + 82630442 ATGTGCCCCACCTCCACTGACCTGTACTCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261858 30 - 81552678 CTGTGCCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 T 30 T 61 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=3632.000000 s hg38.chr17_GL383563v3_alt 286201 23 + 375691 TTCTGACTCCACTTCCACTGACG s panTro4.chr17 260655 23 + 82630442 CTGTGCCCCCACCTGCATTGACC i panTro4.chr17 C 0 T 214 s nomLeu3.chr19 261827 23 - 81552678 CTGCGCCTCCACCTCCACTGACC i nomLeu3.chr19 T 61 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=10070.000000 s hg38.chr17_GL383563v3_alt 286224 38 + 375691 TGTAGTCCCTGTGCCCCACCTCCATTGACCTGTAGTCC s panTro4.chr17 260464 38 + 82630442 TGTAGTCCCTGGGCCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 T 214 C 0 s nomLeu3.chr19 261850 38 - 81552678 TGCAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 C 0 T 30 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=1018.000000 s hg38.chr17_GL383563v3_alt 286262 5 + 375691 CTGTG s panTro4.chr17 260502 5 + 82630442 ATGTG i panTro4.chr17 C 0 T 105 s nomLeu3.chr19 261858 5 - 81552678 CTGTG i nomLeu3.chr19 T 30 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=1424.000000 s hg38.chr17_GL383563v3_alt 286267 16 + 375691 CTCCACCTCCACTGAC s nomLeu3.chr19 261863 16 - 81552678 CCCCACCTCCACTGAC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260507 105 + 82630442 T a score=1880.000000 s hg38.chr17_GL383563v3_alt 286283 9 + 375691 GTGTAATCC s panTro4.chr17 260402 9 + 82630442 CTGTAGTCC i panTro4.chr17 T 105 C 0 s nomLeu3.chr19 261879 9 - 81552678 CTGTAGTCC i nomLeu3.chr19 C 0 T 30 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7167.000000 s hg38.chr17_GL383563v3_alt 286292 29 + 375691 CTATGCTCCACCTGCATTGACCTGTAGTC s panTro4.chr17 260411 29 + 82630442 CTGTGCCCCACCTCCACTGACCTGTAGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261858 29 - 81552678 CTGTGCCCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 T 30 T 83 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=537.000000 s hg38.chr17_GL383563v3_alt 286321 9 + 375691 TCTGTGACC s panTro4.chr17 260440 9 + 82630442 CCTGTGCCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261887 83 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=12668.000000 s hg38.chr17_GL383563v3_alt 286330 60 + 375691 CCACCTCCATTGACCTGTAGCCCCTGTGCT-CCTCCTCCACTGACCAGTAGTCCCTGTGTT s panTro4.chr17 260449 60 + 82630442 CCACCTCCATTGACCTGTAGTCCCTGGGCC-CCACCTCCATTGACCTGTAGTCCATGTGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261804 61 - 81552678 CCACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTGCC i nomLeu3.chr19 T 83 T 61 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=600.000000 s hg38.chr17_GL383563v3_alt 286390 2 + 375691 CC s panTro4.chr17 260509 2 + 82630442 CC i panTro4.chr17 C 0 I 166 s nomLeu3.chr19 261804 2 - 81552678 CC i nomLeu3.chr19 T 61 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=941.000000 s hg38.chr17_GL383563v3_alt 286392 12 + 375691 ACCTCCACTGAA s nomLeu3.chr19 261806 12 - 81552678 ACCTCCACTGAC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260511 166 + 82630442 I a score=3067.000000 s hg38.chr17_GL383563v3_alt 286404 18 + 375691 CTGTAGTCCCTGTGCTCC- s panTro4.chr17 260677 18 + 82630442 CTGTAGTCCCTGGGCCCC- i panTro4.chr17 I 166 C 0 s nomLeu3.chr19 261818 19 - 81552678 CTGCAGTCCCTGCGCCTCC i nomLeu3.chr19 C 0 T 59 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=17131.000000 s hg38.chr17_GL383563v3_alt 286422 81 + 375691 ACCTCCATTGAACTGTAGTCCCTGTGCTCCACCTCCACTGACCTGTAGTCCCTGTGACCCCACCTCCATTGACCTGTAGTC s panTro4.chr17 260695 80 + 82630442 ACCTCCATTGACCTGTAGTCCATGTGCCCCACCTCCACTGACCTGTAGTCCATGTG-CCCCACCTCCAGTGACCTGTAGTC i panTro4.chr17 C 0 T 182 s nomLeu3.chr19 261778 79 - 81552678 ACCTCCACTGACCTGCAGTCCCTGCG--CCACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTC i nomLeu3.chr19 T 59 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7348.000000 s hg38.chr17_GL383563v3_alt 286503 31 + 375691 TCTGTGCTCC-ACCTCCATTGACCTGTAGTCC s panTro4.chr17 260593 32 + 82630442 CCTGTGCCCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 T 182 C 0 s nomLeu3.chr19 261857 31 - 81552678 CCTGTGCCCC-ACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 C 0 T 176 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=3790.000000 s hg38.chr17_GL383563v3_alt 286534 19 + 375691 CTGTGCCCCACCTCCACTG s panTro4.chr17 260625 19 + 82630442 ATGTGCCCCACCTCCACTG i panTro4.chr17 C 0 T 284 s nomLeu3.chr19 261712 17 - 81552678 CTGTG--CCACCTCCACTG i nomLeu3.chr19 T 176 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=956.000000 s hg38.chr17_GL383563v3_alt 286553 17 + 375691 ACCTGATGTCTCTGTGC s nomLeu3.chr19 261729 17 - 81552678 ACCTGTAGTCCCTGCGC i nomLeu3.chr19 C 0 T 56 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260644 284 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 286570 2 + 375691 TC e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261746 56 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260644 284 + 82630442 T a score=100.000000 s hg38.chr17_GL383563v3_alt 286572 1 + 375691 C s nomLeu3.chr19 261690 1 - 81552678 C i nomLeu3.chr19 T 56 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260644 284 + 82630442 T a score=27834.000000 s hg38.chr17_GL383563v3_alt 286573 118 + 375691 ACCTCCACTGACCTGTAGTCCCTGTGCCCCAACTCCACTGACCTGTAGTCCCTGTGCTCCACCTCCACTGACCTGTAGTCACTGTGCACCCACCTCCATTGACCTGCAGTCTCTGTGC s panTro4.chr17 260360 118 + 82630442 ACCTCCATTGACCTATAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGGGC i panTro4.chr17 T 284 C 0 s nomLeu3.chr19 261691 114 - 81552678 ACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACCTGTAGTCCCTGCG--CCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCACTGACCTGCAGTCCCTGCGC i nomLeu3.chr19 C 0 T 87 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=69.000000 s hg38.chr17_GL383563v3_alt 286691 2 + 375691 TC s panTro4.chr17 260478 2 + 82630442 CC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261805 87 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7160.000000 s hg38.chr17_GL383563v3_alt 286693 28 + 375691 CACCTCCATTGACCTGTAGTCCCTGTGC s panTro4.chr17 260480 28 + 82630442 CACCTCCATTGACCTGTAGTCCATGTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261718 28 - 81552678 CACCTCCACTGACCTGTAGTCCCTGCGC i nomLeu3.chr19 T 87 I 59 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=69.000000 s hg38.chr17_GL383563v3_alt 286721 2 + 375691 TC s panTro4.chr17 260508 2 + 82630442 CC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261746 59 - 81552678 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=6637.000000 s hg38.chr17_GL383563v3_alt 286723 28 + 375691 CACCTCCACTGACCTGCAGTCCCTGAGC s panTro4.chr17 260510 28 + 82630442 CACCTCCATTGACCTGTAGTCCCTGTGA i panTro4.chr17 C 0 T 213 s nomLeu3.chr19 261805 28 - 81552678 CACCTCCACTGACCTGCAGTCCCTGCGC i nomLeu3.chr19 I 59 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=12973.000000 s hg38.chr17_GL383563v3_alt 286751 56 + 375691 CCCCACCTCCATTGACCTGTAGTCCCTGTGACTCCACCTCCATTCACCTGTAGTCC s panTro4.chr17 260325 56 + 82630442 CCCCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTATAGTCC i panTro4.chr17 T 213 C 0 s nomLeu3.chr19 261833 55 - 81552678 CTCCACCTCCACTGACCTGCAGTCCCTGTG-CCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 C 0 T 198 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=651.000000 s hg38.chr17_GL383563v3_alt 286807 8 + 375691 CTGTGCTC s panTro4.chr17 260381 8 + 82630442 CTGTGCCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261888 198 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=14567.000000 s hg38.chr17_GL383563v3_alt 286815 57 + 375691 CACCTCCACTGACCTGTAGTCCCTGTGCTCCACCTCCACTGACCTGTAGTCCCTGTG s panTro4.chr17 260389 57 + 82630442 CACCTCCACTGACCTGTAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCCCTGTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261690 55 - 81552678 CACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACCTGTAGTCCCTGCG i nomLeu3.chr19 T 198 T 56 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=-45.000000 s hg38.chr17_GL383563v3_alt 286872 3 + 375691 ACT s panTro4.chr17 260446 3 + 82630442 CCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261745 56 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=10111.000000 s hg38.chr17_GL383563v3_alt 286875 45 + 375691 CCACCTCCACTGACGTGTAGTCCCTGTGCCCCACCTCCATTGACC s panTro4.chr17 260449 45 + 82630442 CCACCTCCATTGACCTGTAGTCCCTGGGCCCCACCTCCATTGACC i panTro4.chr17 C 0 I 17 s nomLeu3.chr19 261689 43 - 81552678 CCACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACC i nomLeu3.chr19 T 56 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=3217.000000 s hg38.chr17_GL383563v3_alt 286920 49 + 375691 TGTAGTCCCTGTATCCCCACCTTCATTCACCTGTAGTCCCTGTGCCCCC s nomLeu3.chr19 261732 46 - 81552678 TGTAGTCCCTGCG---CCACCTCCACTGACCTGTAGTCCCTGTGCCCCC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260494 17 + 82630442 I a score=6482.000000 s hg38.chr17_GL383563v3_alt 286969 26 + 375691 ACCTCCATTAACCTGTAGTCCCTGTG s panTro4.chr17 260511 26 + 82630442 ACCTCCATTGACCTGTAGTCCCTGTG i panTro4.chr17 I 17 C 0 s nomLeu3.chr19 261778 26 - 81552678 ACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 C 0 T 87 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=291.000000 s hg38.chr17_GL383563v3_alt 286995 3 + 375691 ACC s panTro4.chr17 260537 3 + 82630442 ACC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 87 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=32932.000000 s hg38.chr17_GL383563v3_alt 286998 152 + 375691 CCACCTCCACTGACCTGTAGTCCCTGTGACCCCACCTCCACTGACCTGTAGTCCCTGTGACTCCACCTCCACTGACCTGAAATCCCTGTGCCACACCTCCATTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCTCTGTGA s panTro4.chr17 260540 151 + 82630442 CCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCATGTGCCCCACCTCCACTGACCTGTACTCCCTGTGCCCCCACCTGCATTGACCTGTAGTCCCTG-GG i panTro4.chr17 C 0 T 184 s nomLeu3.chr19 261717 146 - 81552678 CCACCTCCACTGACCTGTAGTCCCTGCG---CCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCACTGACCTGCAGTCCCTGCGC--CACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTG- i nomLeu3.chr19 T 87 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6686.000000 s hg38.chr17_GL383563v3_alt 287150 24 + 375691 CCCCACCTCCATTGACCTGTAGTC s panTro4.chr17 260507 24 + 82630442 CCCCACCTCCATTGACCTGTAGTC i panTro4.chr17 T 184 I 99 s nomLeu3.chr19 261863 24 - 81552678 CCCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=100.000000 s hg38.chr17_GL383563v3_alt 287174 1 + 375691 C s nomLeu3.chr19 261887 1 - 81552678 C i nomLeu3.chr19 C 0 T 56 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260531 99 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 287175 5 + 375691 CTGTG e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261888 56 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260531 99 + 82630442 I a score=1955.000000 s hg38.chr17_GL383563v3_alt 287180 31 + 375691 ATTCCACCTACATTCACCTGTAGTCCCTGTG s nomLeu3.chr19 261832 31 - 81552678 CCTCCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 T 56 T 90 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260531 99 + 82630442 I a score=-31.000000 s hg38.chr17_GL383563v3_alt 287211 1 + 375691 T s nomLeu3.chr19 261773 1 - 81552678 C i nomLeu3.chr19 T 90 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260531 99 + 82630442 I a score=7241.000000 s hg38.chr17_GL383563v3_alt 287212 30 + 375691 CCCCACCTCTATTGACCTGTAGTCCCTGTG s panTro4.chr17 260630 30 + 82630442 CCCCACCTCCACTGACCTGTACTCCCTGTG i panTro4.chr17 I 99 C 0 s nomLeu3.chr19 261774 30 - 81552678 CCCCACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 C 0 T 58 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=2148.000000 s hg38.chr17_GL383563v3_alt 287242 25 + 375691 CTCCCACCTGCATTGACCTATAGTC s panTro4.chr17 260660 25 + 82630442 CCCCCACCTGCATTGACCTGTAGTC i panTro4.chr17 C 0 T 154 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 58 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 287267 1 + 375691 T e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 58 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260685 154 + 82630442 T a score=973.000000 s hg38.chr17_GL383563v3_alt 287268 10 + 375691 CCTGTGACCC s panTro4.chr17 260531 10 + 82630442 CCTGTGACCC i panTro4.chr17 T 154 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 58 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=15146.000000 s hg38.chr17_GL383563v3_alt 287278 63 + 375691 CACCTCCATTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGTGACTCC s panTro4.chr17 260541 63 + 82630442 CACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGTGCCCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261746 60 - 81552678 CACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCACTGACCTGCAGTCCCTGCGCC--- i nomLeu3.chr19 T 58 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=4518.000000 s hg38.chr17_GL383563v3_alt 287341 57 + 375691 ACCTCCACTGATGTGTAGTCCCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTGTG s nomLeu3.chr19 261806 57 - 81552678 ACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 C 0 T 31 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260604 0 + 82630442 C a score=2244.000000 s hg38.chr17_GL383563v3_alt 287398 34 + 375691 ACTCCACCTCCAGTGATGTGTAGTCCCTGTGCTC s nomLeu3.chr19 261832 34 - 81552678 CCTCCACCTCCACTGACCTGCAGTCCCTGTGCCC i nomLeu3.chr19 T 31 T 120 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260604 0 + 82630442 C a score=2300.000000 s hg38.chr17_GL383563v3_alt 287432 31 + 375691 CACCTCCATTGACCTGTAGTCTCTCTGCACC s nomLeu3.chr19 261746 31 - 81552678 CACCTCCACTGACCTGTAGTCCCTGTGCCCC i nomLeu3.chr19 T 120 T 87 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260604 0 + 82630442 C a score=4207.000000 s hg38.chr17_GL383563v3_alt 287463 61 + 375691 CACCTCCATTGACCTGCAGTCCCTGTGCTCCACCTCCATTGACCTGTAGTCCCTGTGCTCC s nomLeu3.chr19 261690 57 - 81552678 CACCTCCACTGACCTGCAGTCCCTGTGC--CACCTCCACTGACCTGTAGTCCCTGCGC--C i nomLeu3.chr19 T 87 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260604 0 + 82630442 C a score=13756.000000 s hg38.chr17_GL383563v3_alt 287524 57 + 375691 ACCTCCACTGACCTGTAGTCCCTGTG-CCCCACCTCCATTGACCTGTAGTCCCTGTGC s panTro4.chr17 260604 57 + 82630442 ACCTCCATTGACCTGTAGTCCATGTG-CCCCACCTCCACTGACCTGTACTCCCTGTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261747 58 - 81552678 ACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCACTGACCTGCAGTCCCTGCGC i nomLeu3.chr19 C 0 T 31 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=3908.000000 s hg38.chr17_GL383563v3_alt 287581 30 + 375691 CCCCACCTCCATTGACCTGTAGTCCCTGTG s panTro4.chr17 260661 18 + 82630442 CCCCACCTGCATTGACCT------------ i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261774 30 - 81552678 CCCCACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 T 31 T 142 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=549.000000 s hg38.chr17_GL383563v3_alt 287611 34 + 375691 AGTCCATCTCCAGTGGTGCGTAGTCCCTGTGCTC s panTro4.chr17 260679 15 + 82630442 -------------------GTAGTCCCTGGGCCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261804 142 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=13178.000000 s hg38.chr17_GL383563v3_alt 287645 57 + 375691 CACCTCCATTGACCTGTAGTCCCTGTGCTCCACCTCCACTGACCTGTAGTCTCTGTG s panTro4.chr17 260694 57 + 82630442 CACCTCCATTGACCTGTAGTCCATGTGCCCCACCTCCACTGACCTGTAGTCCATGTG i panTro4.chr17 C 0 T 244 s nomLeu3.chr19 261662 55 - 81552678 CACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACCTGCAGTCCCTGTG i nomLeu3.chr19 T 142 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6435.000000 s hg38.chr17_GL383563v3_alt 287702 31 + 375691 CTCCACCTCCATTGACCTGTAGTCTCTCTAC s panTro4.chr17 260507 31 + 82630442 CCCCACCTCCATTGACCTGTAGTCCCTGTGA i panTro4.chr17 T 244 C 0 s nomLeu3.chr19 261717 29 - 81552678 --CCACCTCCACTGACCTGTAGTCCCTGCGC i nomLeu3.chr19 C 0 I 59 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=86.000000 s hg38.chr17_GL383563v3_alt 287733 3 + 375691 ACC s panTro4.chr17 260538 3 + 82630442 CCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261746 59 - 81552678 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=6835.000000 s hg38.chr17_GL383563v3_alt 287736 30 + 375691 CACCTCCATTGTCCTGTAGTCCCTGTGACC s panTro4.chr17 260541 30 + 82630442 CACCTCCACTGACCTGTAGTCCCTGTGCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261805 30 - 81552678 CACCTCCACTGACCTGCAGTCCCTGCGCCT i nomLeu3.chr19 I 59 T 31 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7082.000000 s hg38.chr17_GL383563v3_alt 287766 28 + 375691 CCACCTCCATTGACCTGTAGTCTCTGTG s panTro4.chr17 260571 28 + 82630442 CCACCTCCATTGACCTGTAGTCCCTGTG i panTro4.chr17 C 0 I 26 s nomLeu3.chr19 261804 28 - 81552678 CCACCTCCACTGACCTGCAGTCCCTGCG i nomLeu3.chr19 T 31 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=-139.000000 s hg38.chr17_GL383563v3_alt 287794 3 + 375691 C-TC s nomLeu3.chr19 261832 4 - 81552678 CCTC i nomLeu3.chr19 C 0 T 118 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260599 26 + 82630442 I a score=1988.000000 s hg38.chr17_GL383563v3_alt 287797 22 + 375691 CACCTCCACTGACCTGTAGTCT s nomLeu3.chr19 261718 22 - 81552678 CACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 T 118 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260599 26 + 82630442 I a score=13545.000000 s hg38.chr17_GL383563v3_alt 287819 63 + 375691 CTGTGCCCCACCTCCACTGACCTGTATTCTCTGTG-CTCCACCTCCAGTGACCTGTAGTCCCTG s panTro4.chr17 260625 64 + 82630442 ATGTGCCCCACCTCCACTGACCTGTACTCCCTGTGCCCCCACCTGCATTGACCTGTAGTCCCTG i panTro4.chr17 I 26 T 245 s nomLeu3.chr19 261740 62 - 81552678 --CTGCGCCACCTCCACTGACCTGTAGTCCCTGTGCCCCCACCTCCACTGACCTGCAGTCCCTG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=329.000000 s hg38.chr17_GL383563v3_alt 287882 2 + 375691 TG s panTro4.chr17 260444 2 + 82630442 TG i panTro4.chr17 T 245 C 0 s nomLeu3.chr19 261802 2 - 81552678 CG i nomLeu3.chr19 C 0 I 28 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=13662.000000 s hg38.chr17_GL383563v3_alt 287884 56 + 375691 ACTCCACCTCCACTGACGTGTAGTCCCTGTGCCCCACCTCCATTGACCTGTAGTTC s panTro4.chr17 260446 56 + 82630442 CCCCCACCTCCATTGACCTGTAGTCCCTGGGCCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261832 56 - 81552678 CCTCCACCTCCACTGACCTGCAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 I 28 T 30 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7480.000000 s hg38.chr17_GL383563v3_alt 287940 30 + 375691 CTGTGCTCCACCTCCATTGACTTGTAGTCC s panTro4.chr17 260502 30 + 82630442 ATGTGCCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261858 30 - 81552678 CTGTGCCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 T 30 T 84 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=382.000000 s hg38.chr17_GL383563v3_alt 287970 4 + 375691 CTGT s panTro4.chr17 260532 4 + 82630442 CTGT i panTro4.chr17 C 0 T 66 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261888 84 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 287974 3 + 375691 ACT e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261888 84 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260536 66 + 82630442 T a score=1897.000000 s hg38.chr17_GL383563v3_alt 287977 21 + 375691 CCACCTCCATTGACCTGCAGT s nomLeu3.chr19 261804 21 - 81552678 CCACCTCCACTGACCTGCAGT i nomLeu3.chr19 T 84 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260536 66 + 82630442 T a score=8900.000000 s hg38.chr17_GL383563v3_alt 287998 41 + 375691 GCCTGTGCT-CCACCTCCATTGACCTGCAGTCCCTGTGCCCC s panTro4.chr17 260470 41 + 82630442 CCCTGGGCC-CCACCTCCATTGACCTGTAGTCCATGTGCCCC i panTro4.chr17 T 66 T 60 s nomLeu3.chr19 261825 42 - 81552678 CCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTGCCCC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=5486.000000 s hg38.chr17_GL383563v3_alt 288039 20 + 375691 ACCTCCATTGACCTGTAGTC s panTro4.chr17 260451 20 + 82630442 ACCTCCATTGACCTGTAGTC i panTro4.chr17 T 60 C 0 s nomLeu3.chr19 261867 20 - 81552678 ACCTCCACTGACCTGTAGTC i nomLeu3.chr19 C 0 T 30 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=8333.000000 s hg38.chr17_GL383563v3_alt 288059 32 + 375691 TCTGTGCCCCACCTCCATTGACCTGTAGTCCA s panTro4.chr17 260471 32 + 82630442 CCTGGGCCCCACCTCCATTGACCTGTAGTCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261857 32 - 81552678 CCTGTGCCCCACCTCCACTGACCTGTAGTCCA i nomLeu3.chr19 T 30 T 83 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=782.000000 s hg38.chr17_GL383563v3_alt 288091 8 + 375691 TGTGCCCC s panTro4.chr17 260503 8 + 82630442 TGTGCCCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261889 83 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=7257.000000 s hg38.chr17_GL383563v3_alt 288099 31 + 375691 ACCTCCATTGACCTGAAGTCCCTGTGCCCCC s panTro4.chr17 260511 31 + 82630442 ACCTCCATTGACCTGTAGTCCCTGTGACCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261806 31 - 81552678 ACCTCCACTGACCTGCAGTCCCTGCGCCTCC i nomLeu3.chr19 T 83 T 31 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6424.000000 s hg38.chr17_GL383563v3_alt 288130 24 + 375691 ACCTCCATTGACCTGTAGTCCCTG s panTro4.chr17 260542 24 + 82630442 ACCTCCACTGACCTGTAGTCCCTG i panTro4.chr17 C 0 I 92 s nomLeu3.chr19 261806 24 - 81552678 ACCTCCACTGACCTGCAGTCCCTG i nomLeu3.chr19 T 31 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=12971.000000 s hg38.chr17_GL383563v3_alt 288154 58 + 375691 TGACTCCACCTCCAGTGATGTGTAGTCCCTGTGCTCCACCTCCATTGACCTGTAGTCC s panTro4.chr17 260658 58 + 82630442 TGCCCCCACCTGCATTGACCTGTAGTCCCTGGGCCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 I 92 C 0 s nomLeu3.chr19 261830 58 - 81552678 CGCCTCCACCTCCACTGACCTGCAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 C 0 T 204 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=12272.000000 s hg38.chr17_GL383563v3_alt 288212 59 + 375691 CTGTGCTCCACCTCCACTGACCTGTAGTCTCTGTGCTCCACCTCCATTGACCTGTAGTC s panTro4.chr17 260716 59 + 82630442 ATGTGCCCCACCTCCACTGACCTGTAGTCCATGTGCCCCACCTCCAGTGACCTGTAGTC i panTro4.chr17 C 0 T 209 s nomLeu3.chr19 261684 55 - 81552678 CTGTG--CCACCTCCACTGACCTGCAGTCCCTGTG--CCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 T 204 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=35.000000 s hg38.chr17_GL383563v3_alt 288271 4 + 375691 TCTC s nomLeu3.chr19 261739 4 - 81552678 CCTG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260775 209 + 82630442 T a score=629.000000 s hg38.chr17_GL383563v3_alt 288275 3 + 375691 TGC s panTro4.chr17 260566 3 + 82630442 TGC i panTro4.chr17 T 209 C 0 s nomLeu3.chr19 261743 3 - 81552678 CGC i nomLeu3.chr19 C 0 I 59 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=86.000000 s hg38.chr17_GL383563v3_alt 288278 3 + 375691 ACC s panTro4.chr17 260569 3 + 82630442 CCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261746 59 - 81552678 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=7254.000000 s hg38.chr17_GL383563v3_alt 288281 30 + 375691 CACCTCCATTGACCTGTAGTCCCTGTGACC s panTro4.chr17 260572 30 + 82630442 CACCTCCATTGACCTGTAGTCCCTGTGCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261805 30 - 81552678 CACCTCCACTGACCTGCAGTCCCTGCGCCT i nomLeu3.chr19 I 59 T 31 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=4094.000000 s hg38.chr17_GL383563v3_alt 288311 15 + 375691 CCACCTCCATTGACC s panTro4.chr17 260602 15 + 82630442 CCACCTCCATTGACC i panTro4.chr17 C 0 T 257 s nomLeu3.chr19 261804 15 - 81552678 CCACCTCCACTGACC i nomLeu3.chr19 T 31 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=832.000000 s hg38.chr17_GL383563v3_alt 288326 17 + 375691 TGTAGTCTCTGTGC-TCC s nomLeu3.chr19 261819 18 - 81552678 TGCAGTCCCTGCGCCTCC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260617 257 + 82630442 T a score=13421.000000 s hg38.chr17_GL383563v3_alt 288343 50 + 375691 ACCTCCATTGACCTGTAGTCTCTGTGCCCCACCTCCACTGACCTGTAGTC s panTro4.chr17 260360 50 + 82630442 ACCTCCATTGACCTATAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTC i panTro4.chr17 T 257 C 0 s nomLeu3.chr19 261837 50 - 81552678 ACCTCCACTGACCTGCAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 C 0 T 82 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=620.000000 s hg38.chr17_GL383563v3_alt 288393 9 + 375691 TCTGTGCTC s panTro4.chr17 260410 9 + 82630442 CCTGTGCCC i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e nomLeu3.chr19 261887 82 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=6804.000000 s hg38.chr17_GL383563v3_alt 288402 30 + 375691 CACCTCCAGTGATCTGTAGTCCCTGTGACT s panTro4.chr17 260419 30 + 82630442 CACCTCCACTGACCTGTAGTCCCTGTGCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261805 30 - 81552678 CACCTCCACTGACCTGCAGTCCCTGCGCCT i nomLeu3.chr19 T 82 T 31 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180375 416 + 80997621 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=33667.000000 s hg38.chr17_GL383563v3_alt 288432 83 + 375691 CCATCTCCACTGACGTGTAGTCCCTGTGCC-CCACCTCCATTGACCTGTAGTCCCTGTGCTCCACCTCCATTGACCTGTAGTCC s panTro4.chr17 260449 83 + 82630442 CCACCTCCATTGACCTGTAGTCCCTGGGCC-CCACCTCCATTGACCTGTAGTCCATGTGCCCCACCTCCATTGACCTGTAGTCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261804 84 - 81552678 CCACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTGCCCCACCTCCACTGACCTGTAGTCC i nomLeu3.chr19 T 31 T 86 s macFas5.chr16 179959 79 + 80997621 TCACCTCCACTGTCCTGTAGTCCCCGT--C-CCACCTCCACCGTCCTGTGGTCCCCGTG--TCACCTCCACTGTCCTGTAGTCC i macFas5.chr16 T 416 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=902.000000 s hg38.chr17_GL383563v3_alt 288515 4 + 375691 CTGT s panTro4.chr17 260532 4 + 82630442 CTGT i panTro4.chr17 C 0 T 85 s macFas5.chr16 180038 4 + 80997621 CCGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e nomLeu3.chr19 261888 86 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=-31.000000 s hg38.chr17_GL383563v3_alt 288519 1 + 375691 A s macFas5.chr16 180042 1 + 80997621 G i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e nomLeu3.chr19 261888 86 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260536 85 + 82630442 T a score=11185.000000 s hg38.chr17_GL383563v3_alt 288520 64 + 375691 CTCCACCTCCATTGACCTGCAGTGCCTGTGC-TCCACCTCCATTGACCTGCAGTCCCTGTGCCCC s nomLeu3.chr19 261802 65 - 81552678 CGCCACCTCCACTGACCTGCAGTCCCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTGTGCCCC i nomLeu3.chr19 T 86 C 0 s macFas5.chr16 180043 58 + 80997621 --TCACCTCCACTGACCTGTAGTCCCCGTGT---CACCTCCACTGTCCTGTAGTCCCCGTCCC-- i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260536 85 + 82630442 T a score=10339.000000 s hg38.chr17_GL383563v3_alt 288584 20 + 375691 ACCTCCATTGACCTGTAGTC s panTro4.chr17 260451 20 + 82630442 ACCTCCATTGACCTGTAGTC i panTro4.chr17 T 85 C 0 s nomLeu3.chr19 261867 20 - 81552678 ACCTCCACTGACCTGTAGTC i nomLeu3.chr19 C 0 T 109 s macFas5.chr16 180101 20 + 80997621 ACCTCCACTGTCCTGTAGTC i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=-2.000000 s hg38.chr17_GL383563v3_alt 288604 10 + 375691 TCTCTGCCCC s panTro4.chr17 260471 10 + 82630442 CCTGGGCCCC i panTro4.chr17 C 0 C 0 s macFas5.chr16 180121 8 + 80997621 CCCGTGTC-- i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e nomLeu3.chr19 261887 109 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=5680.000000 s hg38.chr17_GL383563v3_alt 288614 13 + 375691 ACCTCCATTGACG s panTro4.chr17 260481 13 + 82630442 ACCTCCATTGACC i panTro4.chr17 C 0 I 123 s nomLeu3.chr19 261778 13 - 81552678 ACCTCCACTGACC i nomLeu3.chr19 T 109 C 0 s macFas5.chr16 180129 13 + 80997621 ACCTCCACTGTCC i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=13967.000000 s hg38.chr17_GL383563v3_alt 288627 37 + 375691 TGTAGTCCATGTGCCCCACCTCCATTGACCTGAAGTC s panTro4.chr17 260617 37 + 82630442 TGTAGTCCATGTGCCCCACCTCCACTGACCTGTACTC i panTro4.chr17 I 123 C 0 s nomLeu3.chr19 261791 35 - 81552678 TGCAGTCCCTGCG--CCACCTCCACTGACCTGCAGTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180142 35 + 80997621 TGTAGTCCCCGTC--CCACCTCCACTGACCTGTAGTC i macFas5.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172374 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=23061.000000 s hg38.chr17_GL383563v3_alt 288664 35 + 375691 CCTGTGCCCCCACCTCCATTGACCTGTAGTCCCTG s panTro4.chr17 260654 35 + 82630442 CCTGTGCCCCCACCTGCATTGACCTGTAGTCCCTG i panTro4.chr17 C 0 T 123 s nomLeu3.chr19 261826 35 - 81552678 CCTGCGCCTCCACCTCCACTGACCTGCAGTCCCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180177 32 + 80997621 CCCGTG---TCACCTCCACTGACCTGTAGTCCCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172374 35 + 74645514 cctgtagtcccacctcCGCGGACCTGTAGTCCCCG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=17513.000000 s hg38.chr17_GL383563v3_alt 288699 27 + 375691 TGGACCCACCTCCATTGACTTGTAGTC s panTro4.chr17 260566 27 + 82630442 TGCCCCCACCTCCATTGACCTGTAGTC i panTro4.chr17 T 123 C 0 s nomLeu3.chr19 261861 26 - 81552678 -TGCCCCACCTCCACTGACCTGTAGTC i nomLeu3.chr19 C 0 T 141 s macFas5.chr16 180209 24 + 80997621 ---TGTCACCTCCACTGACCTGTAGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172409 24 + 74645514 ---TCCCACCTCCACTGACCTGTAGTC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=361.000000 s hg38.chr17_GL383563v3_alt 288726 10 + 375691 TCTGTGCTCC s panTro4.chr17 260593 10 + 82630442 CCTGTGCCCC i panTro4.chr17 C 0 T 62 s macFas5.chr16 180233 7 + 80997621 CCCGTGT--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172433 7 + 74645514 CCCGTCC--- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e nomLeu3.chr19 261887 141 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M a score=0.000000 s hg38.chr17_GL383563v3_alt 288736 1 + 375691 A e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172440 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180240 0 + 80997621 C e nomLeu3.chr19 261887 141 - 81552678 T e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260603 62 + 82630442 T a score=21195.000000 s hg38.chr17_GL383563v3_alt 288737 26 + 375691 CACCTCCATTGACCTGTATTCCATGT s panTro4.chr17 260541 26 + 82630442 CACCTCCACTGACCTGTAGTCCCTGT i panTro4.chr17 T 62 C 0 s nomLeu3.chr19 261746 26 - 81552678 CACCTCCACTGACCTGTAGTCCCTGT i nomLeu3.chr19 T 141 C 0 s macFas5.chr16 180240 26 + 80997621 CACCTCCACTGTCCTGTAGTCCCCGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172440 26 + 74645514 CACCTCCACTGACCTGTAGTCCCCGT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=900.000000 s hg38.chr17_GL383563v3_alt 288763 3 + 375691 GCC s panTro4.chr17 260567 3 + 82630442 GCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261772 3 - 81552678 GCC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172466 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180266 0 + 80997621 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=22288.000000 s hg38.chr17_GL383563v3_alt 288766 30 + 375691 CCCACCTCCATTGACCTGTAGTTTCTGTGC s panTro4.chr17 260570 30 + 82630442 CCCACCTCCATTGACCTGTAGTCCCTGTGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261775 30 - 81552678 CCCACCTCCACTGACCTGCAGTCCCTGCGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180266 30 + 80997621 CCCACCTCCACTGTCCTGTAGTCCCCGTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172466 30 + 74645514 CCCACCTCCACTGACCTGTAGTCCCCCTCC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=-261.000000 s hg38.chr17_GL383563v3_alt 288796 4 + 375691 TCCA s panTro4.chr17 260600 3 + 82630442 CCC- i panTro4.chr17 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172496 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e macFas5.chr16 180296 0 + 80997621 C e nomLeu3.chr19 261805 0 - 81552678 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=20648.000000 s hg38.chr17_GL383563v3_alt 288800 26 + 375691 CACCTCCATTGACCTGTAGTCCCTGT s panTro4.chr17 260603 26 + 82630442 CACCTCCATTGACCTGTAGTCCATGT i panTro4.chr17 C 0 I 60 s nomLeu3.chr19 261805 26 - 81552678 CACCTCCACTGACCTGCAGTCCCTGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180296 26 + 80997621 CACCTCCACTGACCTGTAGTCCCCGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172496 26 + 74645514 CACTTCCACTGACCTGTAGCCCCCGT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=13425.000000 s hg38.chr17_GL383563v3_alt 288826 21 + 375691 GCCCCCACCTCCATTGACCTG s panTro4.chr17 260689 21 + 82630442 GGCCCCACCTCCATTGACCTG i panTro4.chr17 I 60 C 0 s nomLeu3.chr19 261831 21 - 81552678 GCCTCCACCTCCACTGACCTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180322 18 + 80997621 ---GTCACCTCCACTGACCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172522 18 + 74645514 ---CCCACCTCCACTGACTGG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e calJac3.chrUn_GL286409 977807 0 - 1291538 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=9436.000000 s hg38.chr17_GL383563v3_alt 288847 11 + 375691 AAGTCCCTGTG s panTro4.chr17 260710 11 + 82630442 TAGTCCATGTG i panTro4.chr17 C 0 I 30 s nomLeu3.chr19 261852 11 - 81552678 CAGTCCCTGTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180340 11 + 80997621 TAGTCCCTGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172540 11 + 74645514 TAGTCCCCGTC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977807 11 - 1291538 AAGTCCCGGCG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=476.000000 s hg38.chr17_GL383563v3_alt 288858 1 + 375691 C s nomLeu3.chr19 261863 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180351 1 + 80997621 T i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172551 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977818 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e chlSab2.chr16 162989 92 + 75148670 I e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260721 30 + 82630442 I a score=1200.000000 s hg38.chr17_GL383563v3_alt 288859 3 + 375691 CCC s panTro4.chr17 260751 3 + 82630442 CCC i panTro4.chr17 I 30 C 0 s nomLeu3.chr19 261864 2 - 81552678 -CC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 180352 1 + 80997621 --C i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977819 3 - 1291538 CCC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e chlSab2.chr16 162989 92 + 75148670 I e papAnu2.chr16 172552 0 + 74645514 C e rheMac3.chr16 173809 1103 + 80904711 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=3231.000000 s hg38.chr17_GL383563v3_alt 288862 2 + 375691 CA s panTro4.chr17 260754 2 + 82630442 CA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261866 2 - 81552678 CA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 174912 2 + 80904711 CA i rheMac3.chr16 I 1103 C 0 s macFas5.chr16 180353 1 + 80997621 -A i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172552 2 + 74645514 CA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977822 2 - 1291538 CA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e chlSab2.chr16 162989 92 + 75148670 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=8148.000000 s hg38.chr17_GL383563v3_alt 288864 3 + 375691 CCT s panTro4.chr17 260756 3 + 82630442 CCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 261868 3 - 81552678 CCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 174914 3 + 80904711 CCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 180354 3 + 80997621 CCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172554 3 + 74645514 CCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163081 3 + 75148670 CCT i chlSab2.chr16 I 92 C 0 s calJac3.chrUn_GL286409 977824 3 - 1291538 CCT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75904993 0 + 122082543 C e canFam3.chr9 15730459 0 - 61074082 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=34635.000000 s hg38.chr17_GL383563v3_alt 288867 18 + 375691 CCACTGACCT--GTAGTCCA s panTro4.chr17 260759 18 + 82630442 CCAGTGACCT--GTAGTCCA i panTro4.chr17 C 0 M 2013 s nomLeu3.chr19 261871 18 - 81552678 CCACTGACCT--GTAGTCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 174917 18 + 80904711 CCACTGTCCT--GTAGTCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 180357 18 + 80997621 CCACTGTCCT--GTAGTCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172557 18 + 74645514 CCGCGGACCT--GTAGTCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163084 18 + 75148670 CCACTGACCT--GTAGTCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977827 18 - 1291538 ACATTGACCC--ATAGTCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75904993 19 + 122082543 CCACC-ACCTAGGTAGGCTC i mm10.chr11 C 0 C 0 e canFam3.chr9 15730459 0 - 61074082 C e ponAbe2.chr17 139875 6799 + 73212453 M a score=111723.000000 s hg38.chr17_GL383563v3_alt 288885 77 + 375691 -GGGCCTTGGCAAGGCTGAAGGAGGAGCCCG--CACAGTCTAACACCCAGGCCCCCATCTCCCCTCCAGTATTTTTGGGC s nomLeu3.chr19 261889 79 - 81552678 -GGGCCTCGGCAGGGCCAAAGGAGGAGCCAGTACACAGCCTGACACCCAGGCCCCCATCTCCCCTCCAGTATTTCTGGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 174935 77 + 80904711 -GGCCCTTTGCAGGGCTGAAGAAGGAGCCAG--CAAAGCCTGACACCTATGTCCCCATCATCCCTCCAGTATTCTTGGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 180375 77 + 80997621 -GGCCCTACGCAGGGCTGAAGAAGGAGCCAG--CAAAGCCTGACACCTATGTCCCCATCATCCCTCCAGTATTCTTGGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172575 76 + 74645514 -GGCCCTTCACAGGGCTT-AGAAGGAGCCAG--CAAAGCCTGACACCGACGTCCCCATCATCCCTCCAGTATTCTTGGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163102 76 + 75148670 -GGCCCTTCGCAGGGCTG-AGAAGGAGCCAG--CAAAGCCTGACACCTACGTCCCCATCATCCCTCCAGTATTCTTGGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977845 75 - 1291538 -AGGCCTTTGCAGGGCTGGAGGAGGAGCCAG--CACAGCCCGACAGC--AGCCTCCACCTCCCCTCCAGTATTCTTGGAC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75905012 70 + 122082543 TAGTTCT-----GGGCTGAAAGAGGAACCAG--C-CAGCAGGCCCTACAGGCCCCCATTG-CCCTCTGCTGTGCTTGGA- i mm10.chr11 C 0 C 0 e canFam3.chr9 15730459 0 - 61074082 C e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260777 2013 + 82630442 M a score=650277.000000 s hg38.chr17_GL383563v3_alt 288962 375 + 375691 CAGTTAATCCACCTTCCTCAGCCCAGTTTTCCCTTACCACATATGACAAAAGCAGGAAAAGAAA--TGA-GGTAGCTGAagtcctggctttcctgcttactaattgggcaggttaacttcactgtacctttggttttctcatcCAGCTTTTGAATGCCCCTGAAAATGCCCT---CAAGTTTGCCAGTGGCCTGCATGT-TCCACGTCCACATTTATTTCTTTTGACTTCTCCATCTTTCCCGGTTCTCTCAACAGTTCAcaccccaccccaccccaccccatcctccatcctccaccctccaccctcTGTTGTTTCTTCCCAGGGTTTA----TTATTTCCTGACATCATCTTGTTTATTTGATCATTACTTGTTTTTTAGTTCC s nomLeu3.chr19 261968 354 - 81552678 CGGTTAATCCACCTTCCTCCGCCCAGTTT------ACCACATATGACAAAAGCAGGAAAAAAAAAATGA-GATAGCTGAAATCCTGGCTTTCCTCCTTATTAATTGG-CAGATTAACCTCACTGCACCTTTGGTTTTCTCATCCAGCTTTTGAATGCCCCTAAAAATGCCCT---CAAGGTTGCCAATGGCCTCCATGT-TCCACGTCCACATTTACTTCTTTTAACTTCTCCATCTTTCCCGGTCCTCTCAACACTTC----------CCACCCCTCCCCATCCCCCATCCTCCATCTTCCAC--TCTGTTATTTCTTCCCAGGGTT--------ATTTCCTGACATCATCTTGTTTATTTGATCATTACTTGTTTTTTAGTTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 175012 360 + 80904711 CAGTTAATCCACATTCCTCAGCCCAATTT------ACCACATATGACAGAA-CAGGAGAAAAAAATTGACCACAGCTGTGATCCTGGCTTCCCTACTTATTACCGGG-CAGATTAACCTCACTGCACCTCTGGTTTTCTCATCCCGCTCTTGAGTGCTCCTGAAAATGCCCT---CCAGGTTGCCAACAGCCTCCATGA-TCCACGTCCATGTTCATTTATTTTGACTTCTCCATCTTTCCCGGTCCTCTCAGCACTTC----------CCACCCCACCCCATCCTCCATCCTCCATCTTCCGTCCTCTGTTATTTCTTCCCAGGATTTA----TTATTTCCTGAAATCATCTTGTTTATTTGATCATTACTTGTTTTTTAGTTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 180452 360 + 80997621 CAGTTAATCCACATTCCTCAGCCCAATTT------ACCACATATGACAGAA-CAGGAGAAAAAAATTGACCACAGCTGTGATCCTGGCTTCCCTACTTATTACTGGG-CAGATTAACCTCACTGCACCTCTGGTTTTCTCATCCCGCTTTTGAGTGCTCCTGAAAATGCCCT---CCAGGTTGCCAACAGCCTCCATGA-TCCACGTCCATGTTCATTTATTTTGACTTCTCCATCTTTCCCGGTCCTCTCAGCACTTC----------CCACCCCACCCCATCCTCCATCCTCCATCTTCCGTCCTCTGTTATTTCTTCCCAGGATTTA----TTATTTCCTGAAATCATCTTGTTTATTTGATCATTACTTGTTTTTTAGTTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 172651 359 + 74645514 CAGTTAATCCACATTCCTCAGCCCAGTTT------ACCACATATgacagaa-caggag-aaaagacTGACCACAGCTGTGATCCTGGCTTCCCTACTTATTACCGGG-CAGATTAACCTCACTGCACCCTTGGTTTTCTCATCCCGCTTTTGAGTGCTCCTGAAAATGCCCT---CCAGGTTGCCAACGGCCTCCATGA-TCCACGTccatgttcatttattttgactTCTCCATCTTTCCCGGTCCTCTCAGcacttc----------ccaccccaccccatcctccatcctccatctTCTGTCCTCTGTTATTTCTTCCTAGGGTTTA----TTATTTCCTGAAATCATCTTGTTTATTTGATCATTACTTGTTTTTTAGTTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163178 359 + 75148670 CAGTTAATCCACATTCCTCAGCCCAGTTT------ACCACATATGACAGAA-CAGGAA-AAAAGATTGACCACAGCTGTGATCCTGGCTTCCCTACTTATTACCGGG-CAGATTAACCTCACTGCACCCTCGGTTTTCCCATCCCGCTTTTGGGTGCTCctgaaaatgccct---ccaggttgccaacggcctccatga-tccacgtccatgttcatttattttgacttctccatctttcccggtcctctcagcaCTTC----------CCACCCCACGCCATCCTCCATCCTCCATCTTCTGAACTCTGTTATTTCTTCCCAGGATTTA----TTATTTCCTGAAATCATCTTGTTTATTTGATCATTACTTGTTTTTTAGTTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 977920 337 - 1291538 CAATTAATCCACATTCCTCAGCCCAGTTT------ACCACATATGACAGAG-CAGGAAAACAAA--TGACCGCAGCTGAAATCCTGCCTTTCCCATTTGTTAATTGGGCACATTAACCTCACTGTACCTTTGATTTTCTCATCGACCTTTTGAATGccactgaaaatgccctta-ccaagttgccaatggccgccatct-tccacgtccatgtttatttatcctgacttctccatctctcctggtcctctcagcaCTTC----------CCAGCCC------------------------CCAGCCCCCGTTATTTCTTCCCAGAGCTTA----CTGTGTCCTGAAACCGTCTTGTTCACTTGATCGTTACTTGTTTTTAAGTTCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75905082 302 + 122082543 TGATCAGTTCATAGCCTTTAGAGTAGAAT-----GACCTCATGCGATAGAA--AGGAGAAAAGG-----CTGTGCCTCGGATCCTGGTTTTCCTGCTTATTCGTC---TTGGTTAA-----------------------TGTTTAGCTTTGGATTTCCTCACATGATGTCCTTGCCAAGGCTGCAAA-AGCCT-CAGGT-TTCAAGCCCACATGTAC-TGCTCCAGCAGGTCCACCTCT-ATGGCCCTCTCGGTGCAGA----------TCG-CCCACCCCATC----------------CGAGGCTCTGTTATTTCTTCTCAGAATTGG----TAAATCTCTGAAAACATCTT----AGTTGATTATGGCTTGTC------ATCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15730459 358 - 61074082 CAGCAAATCCACATTCCTTAGCCCAGTTC------ACCACATGTTACAAAA-CAGGGAAAAA----Tgaccttagccg-aatcctggcttttccacttactagtttggtatattgacctttttgcatc-tggattctctcatcCAGCTTTTAATTGccactcaaaatgatcttaataaggttgccaatgacttccatgtggctaagtccatgtttactt-ctttgtcttctctatattccatggtcctcttagcTCTAA----------CCACCCA---CCATGCCCCATCACCAATCTTCTATTTCCTGTTATTTCTTCCTAGAATGTACTATTTATTTCCTGAAATATTCTTATTTATTTGATCATTATTTGTT-TTTGGTTCC i canFam3.chr9 C 0 I 1 e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260777 2013 + 82630442 M a score=138793.000000 s hg38.chr17_GL383563v3_alt 289337 87 + 375691 CTTGCCCAATATCATCTCAAGAAAA-------TTCCTTCTCTG-TCTTCTTCAGTATAATAACTCGAGTCTTAAAACC------ATGACT-AGCAgccaggc-- s nomLeu3.chr19 262322 87 - 81552678 CTCGCCCAATATCATCCCAAGAAAA-------TTCCTTCTCTG-TCTTCTTCAGTACAATAACTCCAGTCTTAAAACC------ATGACT-AGCAgccgggc-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 175372 85 + 80904711 CTTGCCCAATATCATCTCAAAAAAG-------TCCCTTCTCTG-TCTTCTTCAGTATAGTAACTCAAGTCCCAAAGCC------ACGACT-Ag--gccgggc-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 180812 86 + 80997621 CTTGCCCAATATCATCTCAAAAAAG-------TTCCTTCTCTGTTCTTCTTCAGTATAGTAACTCAAGTCCTAAAGCC------ACGACT-Ag--gccgggc-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 173010 85 + 74645514 CTTGCCCAATATAATCTCAAAAAAg-------ttccttctctg-tcttcttcagtATAGTAACTCAAGTCCTAAAACC------Acgact-ag--gctgggc-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163537 85 + 75148670 CTTGCCCAATATCATCTCAAAAAAG-------TTCCTTCTCCG-TCTTCTTCAGTATAGTAACTCAAGTCTTAAAACC------ACGACT-Ag--gcccggc-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 978257 87 - 1291538 CTTGCCCACTATTATCTCAAGAAAT-------TTCCTCCTCTG-TCTTCTTCAGTATAATAACTCCAGTCTTAAAACC------ATGACC-AGCAGCCAGgc-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75905384 96 + 122082543 CTTG-------TTATCTTAAGAGAGGAGATGTTTTTCTTTCTG-TCTTGTTCACTTTAAGAGCTCCAAGCTTggggctagagagatggctcagcagttaagagc i mm10.chr11 C 0 C 0 e canFam3.chr9 15730817 1 - 61074082 I e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 260777 2013 + 82630442 M a score=198250.000000 s hg38.chr17_GL383563v3_alt 289424 97 + 375691 acggtggctcacgcctgtaatcccagcagtttgggaggccgaggcgggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggtga s panTro4.chr17 262793 97 + 82630442 Acggtggcttacgcctgtaatcccagcagtttgggaggccgaggtgggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggtga i panTro4.chr17 M 2013 C 0 s nomLeu3.chr19 262409 87 - 81552678 acagtggctcacacctgtaatccc-gcactttgggaggccaaggtgggcagatcacctgaggtcaggagttcaagaccagcc---------tggtga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 175457 97 + 80904711 gcggtggctcgaacctgtcatcccagcactttgggaggccgaggcaggcggatcacctgaggtcagcagatcgagaccagcctggccaacatggcga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 180898 97 + 80997621 gcggtggctcaaacctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaggagatcgagaccagcctggccaacatggcga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 173095 97 + 74645514 gcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggagatcgagaccggcctggccaacatggcga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163622 97 + 75148670 gcggtggctcaagcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggagatcgagaccagcctggccaacatggcga i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 978344 95 - 1291538 --agtggctcacgcctgtaatcctagcactttggaaggctgaggccagtggatcagctgaggttaggagttgaagaccatcctggtcaacatggcga i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75905480 53 + 122082543 atggt---------ctgtgcttccagaagttccag---------------------------------gttcaattcccagc--accaacatggcag i mm10.chr11 C 0 I 163 e canFam3.chr9 15730817 1 - 61074082 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=369584.000000 s hg38.chr17_GL383563v3_alt 289521 185 + 375691 aaccctgtctctactaaag-ttcaaaaattagccggcagtggtggcatgcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgg-aggcagaggttgcagtgagccaagactgca--ccatttgcactccagcctgggtgacagagcaagactccgtctcTGGGGGGAG------- s panTro4.chr17 262890 187 + 82630442 aaccctgtctctactaaaa-ttcaaaaattagccggcagtggtggcatgcacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaatctgg-aggcagaggttgcagtgagccaagactgca--ctatttgtactccagcctgggtgacagagcaagactacgtctcTGGGGGGGG-----GG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 262496 184 - 81552678 aaccctgtctctactgaaa-tac-aaaattagctgggcatggtggcacacacttgtaatcccagctactcgggaggctgaggcaggaggatcgcttgaaactgg-aggcagaggttgcagtgagccaagattgcg--ccatttgcactccagcctgggtgacagagcgagactctgcctcTGGGGGGCG------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 175554 194 + 80904711 aacctcatctctactaaaactataaaaattagctgggtgtggtggcgcacgcctgtgatcccaactactcgggaggctgaggcaggaaaatcacttgaacccggaaggcggagcttgcagtgagccgagattgca--ccatttgcactccagcctgggtgacagagcgagactctgtctccagaaagcaaaaacaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 180995 194 + 80997621 aacctcatctctactaaaactataaaaattagccgggtgtggtggcgcacgcctgtgatcccaactactcgggaggctgaggcaggagaatcacttgaacccggaaggcggagcttgcagtgagccgagattgca--ccatttgcactccagcctgggtgacagagcaagactctgtctccagaaagcaaaaacaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 173192 191 + 74645514 aacctcatctctactaaaa-tacaaaaattagccgggcgtggtggtgcacgcctgtaatcccagctactcggaaggcttaggcaggagaattgcttgaacccggaaggtggaggttgcagtgagccgagattgcg--ccatttgcactccagcctgggtgacagagcaaga--ctgtctccagaaagcaaaaacaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163719 193 + 75148670 aacctcatctctactaaaa-tacaaaaattagctgggtgtggtggcgcgcgcctgtaatcccaactactcggaaggcttaggcaggagaatcgcttgaacccagaaggcggaggttgcagtgagccgagattgcg--ccatttgcactccagcctgggtgacagagcaagactctgtctccagaaagcaaaaacaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 978439 191 - 1291538 aaccccttctctactaaaa-tacaaaaattagctgcgtgtggtggtgcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgggctgagatcacatgccatttgcactccagcctgggcgacagagtgagactctgtct-taaaaaaca---acaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75905533 163 + 122082543 I e canFam3.chr9 15730817 1 - 61074082 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=100026.000000 s hg38.chr17_GL383563v3_alt 289706 43 + 375691 AAAAAAGCATGACTAGCACATggaagttacttgaggatgggtt s panTro4.chr17 263077 43 + 82630442 AAAAAAGCATGACTAGCACATggaagttacttgaggatgggtt i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 262680 43 - 81552678 GGGGAAACATGACTAGCACATggaagttacttgaggatgggtt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 175748 43 + 80904711 aaaaaaaCTTGAGTAGTACATggaagttacttgaggatgggtt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 181189 43 + 80997621 aaaaaaaCTTGAGTAGTACATggaagttacttgaggatgggtt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 173383 42 + 74645514 aagaaaacttgagtAGCACATGGAAGTGACTTGAGGAT-GGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163912 43 + 75148670 aaaaaaaCTTGAGTAGCACATggaagttacttgaggatgggtt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 978630 43 - 1291538 caaaaaCCATGACTAGCACATGGAAGTTACTTGAGGATGAGTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75905696 36 + 122082543 AAAACGGCAGG-------CCTGGAAGCTGTTTGAGGATAGGTT i mm10.chr11 I 163 C 0 e canFam3.chr9 15730817 1 - 61074082 I e ponAbe2.chr17 139875 6799 + 73212453 M a score=1396314.000000 s hg38.chr17_GL383563v3_alt 289749 589 + 375691 ccagcaaaactaaggtgaaaac---aaaaaagaggaagacatggtgtcttgagatcagtgtttctcacctaggagggcagcaaagggaaatcccgttataatagctgtgcagctaccagcctagga-ggagcaggagtaagaatctagaagggtttatgccagg----aaaaaaaa------aatagcctccatatgat--agtataattaagatgctaact-atcttgaggattagaaggcatattattctcccagaaataagaaaacgaaaggcaagtcgaaactccag-aaaaactaaaagctataTTTAAAAAGTCCTAGACTCAATGCGAAACAATTTAATATGTGGCACAATTTAGTAT-------------------AAGAAGAAA-ATCAATTTGATCTCCCTGCAAAGATCATTCTTCTTTGAGTAACCAGGGATCAAGAG--AAGC--AGGACCAATGGAACAGAA------AGTGTAATCCCAGCATACTGCTTGGACTTCAGGAAGATAGGATTTAACTAATAACAACTAAAAACATTTTTTCCTTGTTGCCTTCATATATTCTGGAGATGATaacatttattgagtgcctatgtaccaggcaaggttttaagagttttgcgttg s panTro4.chr17 263120 589 + 82630442 ctagcaaaactaaggtgaaaac---aaaaaagaggaagacatggtgtcttgagaccagtgtttctcacctaggagggcagcaaagggaaatcctgttataatagCTGTGCAGCTACCAGCCTAGGA-GGAGCAGGAGTAAGAATCTAGAAGGGTTTATGCCAGG----AAAAAAAA------AATAGCCTCCATATGAT--AGTATAATTAAGATGCTAACT-ATCTTGAGGATTAGAAGGCATATTATTCTCCCAGAAATAAGAAAACGAAAGGCAAGTCAAAACTCCAG-AAAAACTAAAAGCTATATTTAAAAAGTCCTAGACTCAATGCGAAACAATTTAATATGTGGCACAATTTAGTAT-------------------AAGGAGAAA-ATCAATTTGATCTCCCTGCAAAGATCATTCTTCTTTGAGTAACCAGGGATCAAGAG--AAGC--AGGACCAATGGAAAAGAA------AGTGTAATCCCAGCATACTGCCTGGACTTCAGGAAGATAGGATTTAACTAATAACAACTAAAAACATTTTTTCCTTGTTGCCTTCATATATTCTGGAGATGATaacatttattgagtgcctatgtaccaggcaaggttttaagagttttgcgttg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 262723 580 - 81552678 ccagcaaaactaaggtgaaaac--aaaaaaaaaggaagacatggtctcttgagatcagtgtttctcacctaggagggcagcaaagggaa------ttATAATAGCTGTGCAGCTACCAGCCTAGGA-GGAGCAGGAATAAGAATCTAGAAGGGTTTATGCCAGG-----AAAAAAA------AATAGCCTCCATATGAT--AGTAAAATTAAGATGCTAACT-ATGTTGAGGATTAGAAGGCACATTATTCTCTCAGCAATAAGGAAAAGAAAGGCAAGTCAAAACTCCAGAAAAAACTAAAAGTTATATTTAAAAAGTCCTAGACTCAATATGAAACAATTTAATACGTGGCACAATTTAGTAT-------------------AAGGAGAAA-ATCAATTTGATCTCCCTGCAAAGATC---CTTCTTCGAGTAACCAGGGATCAACAG--AAAC--A-GATCAATGGAACAGAA------AGTGTAATCCCAGCATACTGCTTGGCCTTGAGGAAAATAGGATTTATCTAATAACAACTAAAAACATTTTTTTCTTATTGCCTTAATATATTCTGGAGATGATaacatttattgactgcctacgtgccaggcaaggttttaagagttttgcattt i nomLeu3.chr19 C 0 I 295 s rheMac3.chr16 175791 582 + 80904711 ccagaaaaactaaggtgagcac---aaaaaagaggaagacgtggtctcctgagaacagtgtgtctaacctggga-ggcagcaaagggaactcccaTTATAACAGCCGTGCAGCTCCCAGCCTAGGA-GGAGCAGGAGTGAGAATCCAGAAGGGTTTATGCCAGG----AAAAAAAA------AACAGCCTCCATGTAAT--TGTAAAATCGAGATGTTAACTAATCTTGAGGATTAGAAGGCACATTATTCTCTCAACAATAAGAA----AAAGGCAAGTCGAAACTCCAGGAAAAACTAAAAGTTATATTTAAAAAGTCCTAGATTCAATATGAAACCATTTAATATGTGGCACAATTCAGTAT-------------------AAGGAGAAA-ATCAGTTTGATCTCCCTGCAAAGATCGTTCTTCTTTGAGTAACCGGGGATCAACAG--AAGC--A-GGCCAGCAGGACGGAA------AGTGCCATCCTGGCACACTGTTTGGCCTTGAGGAAAATAGGATGTATCTAATAACAACTGAAAACATGTTTTTCTTGTTGACTTAATATATTCTGGA---GATGacatttattgagtgcctatgtgccaggcaaggtttgaagagttttgcattt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 181232 582 + 80997621 ccagaaaaactaaggtgagcac---aaaaaagaggaagacgtggtctcctgagaacagtgtttctaacctggga-ggcagcaaagggaactcccaTTATAACAGCCGTGCAGCTCCCAGCCTAGGA-GGAGCAGGAGTGAGAATCCAGAAGGGTTTATGCCAGG----AAAAAAAA------ACCAGCCTCCATGTAAT--TGTAAAATCGAGATGTTAACTAATCTTGAGGATTAGAAGGCACATTATTCTCTCAACAATAAGAA----AAAGGCAAGTCGAAACTCCAGGAAAAACTAAAAGTTATATTTAAAAAGTCCTAGATTCAATATGAAACCATTTAATATGTGGCACAATTCAGTAT-------------------AAGGAGAAA-ATCAGTTTGATCTCCCTGCAAAGATCGTTCTTCTTTGAGTAACCGGGGATCAACAG--AAGC--A-AGCCAGTAGGACGGAA------AGTGCCATCCTGGCACACTGTTTGGCCTTGAGGAAAATAGGATGTATCTAATAACAACTGAAAACATGTTTTTCTTGTTGACTTAATATATTCTGGA---GATaacatttattgagtgcctatgtgccaggcaaggtttgaagagttttgcattt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 173425 582 + 74645514 CCAGAAAAACTAAGGTGAGCAC---AAAAAAGAGGAAGACGTGGTCTCCTGAGAACAGTGTTTCTAACCTGGGAGGGCAGCAAAGGGAAC-CCCATTGTAACAGCCGTGCAGCTCCCAGCCTAGGA-GGAGCAGGAGTGAGAATCCAGAAGGGTttatgccagg----aaaaaaaa------aacagcctccATGTAAT--TGTAAAATCGAGATGTTAACTAATCTTGAGGATTAGAAGGCACATTATTCTCTCAGCAATAAGAA----AAAGGCAAGTCGAAACTCCAGGAAAAactaaaagttatatttaaaaagtccTAGATTCAATATGAAACCATTTAATATGTGGCACAATTCAGTAT-------------------AAGGAGAAA-ATCAGTTTGACCTCCCTGCAAAGATCGTTCTTCTTTGAGTAACTGGGGATCAACAG--AAGT--A-AGCCAGTAGAACAGAA------AGTGCCATCCTGGCACACTGTGTGGCCTTGAAGAAAATAGGATGTATCTAATAACAactgaaaacatgtttttcttgttGACTTAATATATTCTGGA---GATAACACTTACTGAGTGCCTATGTGCCAGGCAAGGTTTGAAGAGTTTTGCATTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 163955 583 + 75148670 ccagaaaaactaaagtgaacac--aaaaaaagaggaagacatggtctctggagaacagtgtttctaacctgggagggcagcaaagggaactcccattataatagCCGTGCAGCTCCCGGCCTAGGA-GGAGCAGGAGTGAGAATCCAGAAGGGTTTATGCCGGG------GAAAAA------ACCAGCCTCCATGTAAT--TGTAAAATTGAGATGTTAACTAATCTTGAGGATTAGAAGACAGATTGTTCTCTCAGCAATAAGAA----AAAGGCAAGTCGAAACTCCAGGAAAAACTAAAAGTTATATTTAAAAAGTCCTGGATTCAATATGAAACCATTTAATATGTGGCACAATTCAGTAT-------------------AAGGAGAAA-ATCAGTTTGATCTCCCTGCAAAGATCGTTCTTCTTTGAGTAACCAGGGATCACCAG--AAGCAGA-GGCCAGTAGAACAGAA------AGTGCCATCCCAGCACACTGTTTGGCCTTGAGGAAAATAGGATGCATCTAATAACAACT-AAAACATGTTGTTCTTGTTGACTTAATATATTCTGGA---GATaacatttattgagtgcctatgtgccaagcaaggtttgaagagttttgcgttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 978673 573 - 1291538 CCAGCAAAACTAAGATGAAAAT---AAAAAA-------------------GAGAACAGTGTGTCTAAccgaggagggtagcaaaggggagtcccattataacagctgtgcagttaccagcctagaagggagcaggagggagaatctagaagggtttattccaggaaaaaaaaaaaa------aagaggctccatatgat--agtaaacttgagatgctgactaatcgtgaggattggaaggtgcattattctctcagcaataagaaaaagaaaggcaagttgaaactccagaagaaactaaaagtcatacttaaaaagtcccagaatcattataaaacaatttaacatgtggcacagtttagtat-------------------aaGGAGAAA-ATCGATTTGCTCT-CCTGCAAAGATCATTCTCCTTTGAGTAACCAGGGATGAAGAGCACAGC--A-GACCAACAGAATACAC------AGT-CCCTCCCAGCACACAACCTGGCCTTGAGGAAAACAGGATTTATCCAATAACAACTAAAAACATGTTTTTCTTGTTGCCTTAATATATTCTAAAGACGAtaccatt---tgagtgcctatatgccaggcaaggttgtaagagcttcgccttt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75905732 480 + 122082543 CCGGCAAAACTAGGGTGAAACC---AAAAAAGATGTTGGGGTG-----------ACAGTGTCTCTGACCACGGGAGGCCGCAAAGGGGAGTTTCATGCTGATTGCTGCACAGCACATAGTCATGGCTGGAAGTGGAAT---AATCTAGAAGAGTTTCTTCTAGG----AAGAAAAATAACACCACAGGCTCCATATGAT-GAGCAAGACTGAGATCCTGAATAAACGCAAACCTTGCCAGGCACATTATTCTCTGGGAAATAGTAA----A---------CTAAAC------AAAGTCAACGAGTAAGGTCTG--------------------GAAATGCTTTAACACAGGG--CAGTTTAGTAT-------------------AAGAAAAGACACCCATTTGGTCT---TGCAAAGGCCATTCTCCCT----------GGCGTCAAGAG---AGC--A-GA-CAGCAGAACAGAAGAACCCAGCACAGGCCTAGCACACTGCTTGGCCCTCAGGAA-ACAGTGCTTGCCTAA------------------------------------------------------CAGTTACTGAGCACCTGTGTGCTGGATAAGGCTCTGTGAGCTCTGCACTC i mm10.chr11 C 0 C 0 s canFam3.chr9 15730818 548 - 61074082 CCAGGAAAACTAGAGTGAAAAACAAAGGAAAGAGGAAGATACAGTATCTTGGAAACAGC-TCTCTAAcctaggagggcagtaaagggaag-accatgataacagctatgcagcaattagtctatgctggagtagaactaaaagtctaaaagg----------ga----gaaaaaaa------tgtaggctccacgcaatagagtaaaattgagatgctaaataatcctgaggattagaaggcatattatacttgagtcaacaaga-----aaagacaattagaaactccagaaaaaaaaaaaagttatTTTAAAGAAGTCTTGGACTCAACATGTAACAATTTAATATGGGGCATAATTTAGAGTAATCAGTGGAGTATAAGAAAAGGGAAAA-ATCCATTTGACTTTGCAGCAAAGATCATTCTCATTTGAGGGGTCAGGGGTCAAGAG-----C--A-GATCAAGAGAATAAGG------AGCATAATCCTAGTACAATGATTGGTCCTGAGGAGAATTTTATTCCTTT-ATaatgatt-----------------------------------------aataaaattcactgagtacttatgtgcca---aagtttttaaggcctatgcat-- i canFam3.chr9 I 1 C 0 e ponAbe2.chr17 139875 6799 + 73212453 M a score=1464237.000000 s hg38.chr17_GL383563v3_alt 290338 540 + 375691 aagaatatttaatcctcatagcatggtgaggtacatggtatcac-gacc-acatattacaga-caaggaacatcaggtgtgagatattaaacaagttttctgaggtca------tagcagaagagctagattcacagcctgacttctaacaccagctctgggtcTCGTGGCTCGGGTGTGAATCTACCAGAAGGGCTAGAAGATGCCTCCAAGC--TGAGACGCAGAGCTGGCCCTAGACATCAGTCCATTTGGTTTTTAAGTCTTAGTGCTTCTTGCCAAGATGCAGAGGATACCACATGC-------------------CCAACGCAGACATACACA-------CTCCTGGGAGCCAGGATGCAAAGCCACAGCGCAGCGGGGCTGGTCCAG-------GCTGGGAAGCCAGAATGACAGG-----GCCAGAGCAGGGTCTTACCTTCCTGCAGTCTTTGCAGAACACCGACGAGCTGCCCAGGAAGCCCAGCACCTCCCCGCAGAGCAGACACTGGGACAGGCCGTTCCCCATCACATTCCGCCTCATGGTCTCCAGCCGCTCCACCAGCCGCCTGCAGCACAGGA-- s panTro4.chr17 263709 540 + 82630442 aagaatatttaatcctcatagcatggtgaagtacatggtatcac-gacc-acatattacaga-caaggaacatcaggtgtgagatattaaacaagttttctgaggtca------tagcagaagagctagattcacaccctgacttctaacaccagCTCTGGGTCTCGTGGCTCGGGTGTGAATCTACCAGAAGGGCTAGAAGATGCATCCAAGC--TGAGACGCAGAGCTGGCCCTAGACATCAGTCCATTTGATTTTTAAGTCTTAGTGCTTCTTGCCAAGAGGCAGAGGATACCACATGC-------------------CCAACGCAGACATACACA-------CTCCTGGGAGCCAGGATGCAAAGCCACAGTGCAGCGGGGCTGGTCCAG-------GCTGGGAAGCCAGAATGACAGG-----GCCAGAGCAGGGTCTTACCTTCCTGCAGTCTTTGCAGAACACCGACGAGCTGCCCAGGAAGCCCAGCACCTCCCCGCAGAGCAGACACTGGGACAGGCCGTTCCCCATCACATTCCGCCTCATGGTCTCCAGCCGCTCCACCAGCCGCCTGCAGCACAGGA-- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 263598 541 - 81552678 aagaatatttaatcctcatatcatggtgaggtacatggtatcat-gacc-atattttacagattgaggaacatcaggtgtgagatattaaacaagttttctgaggtca------tagcagaagagctagattcgcaccctgacttctaacaccagCTCTGGGTGTCATGGCTGGGGTGTGAATCTACCAGAAGGGCCAGAAGATACATCCCAGC--TGAGACCCAGAGCTGGCCCTAGACGCCAGGCCATTTGATTTTTAAGTCTTAGTGCTTCTTGCCAAGAGGCAGAGGATACCACATGC-------------------CCAGTGCAGACATACACA-------CTCCTGGGAGCCAGGATGCAAAGCCACAGAGCAGCAGGGCTGGTCCAG-------GTTGGGAAGCCAGAATGGCAGG-----GCCAGAGTAGGGTCTTACCTTCCTACAGTCTTTGCAGAACACCGACGAGCTGCCCAGGAAGCCCAGCACCTCCCCGCAGAGCAGACACTGGGACAGGCCATTCCCCATCACGTTCCGCCTCATGGTCTCCAGCCGCTCCACCAGCCGCCTGCAGCACAGGA-- i nomLeu3.chr19 I 295 M 981 s rheMac3.chr16 176373 542 + 80904711 aggaatatttaatcctctgagcatggtgaggtgcatggcatcat-gacc-acattttacaga-tgaggaacatcaggtgtgagatactaaacgagttttctgaggtct------tagcagaagagctagattcacaccctgacttctaacgccagCTCTGGGTCTTGTGGCCTGGGCGTGAATCTAGCAGAAGGGCTGGAAGGTACATCCACGCGATGAGACCCAGAGCTGGCCCTAGACGTCAGGCCATTTGATTTTTAAGTCTTAGTCCTTCTGGCCAAGAGGCAGAGGACACCACACGC-------------------CCAATGCAGACGCACACA-------CTCCTGGGAGCCAGGACGCAAAGCCACAGAGCACCAGGGCGGGTCCAG-------GCTGGGATGCCGGAACGGCAGG-----GCCAGAGCAGGGTCTTACCTTCCTGCAGTCTTTGCAGAACACCGACGAGCTGCCCAGGAAGCCCAGCACCTCCCCACAGAGCAGGCACTGGGACAGGCCATTCCCCATCACGTTCCGCCTCATGGTCTCCAGCCGCTCCACCAGCCGCCTGTGGCACAGGA-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 181814 542 + 80997621 aggaatatttaatcctctgagcatggtgaggtacatggcatcat-gacc-acattttacaga-tgaggaacatcaggtgtgagatactaaacgagttttctgaggtct------tagcagaagagctagattcgcaccctgacttctaacgccagCTCTGGGTCTCGTGGCCTGGGCGTGAATCTAGCAGAAGGGCTGGAAGGTACATCCACGCGATGAGACCCAGAGCTGGCCCTAGACGTCAGGCCATTTGATTTTTAAGTCTTAGTCCTTCTGGCCAAGAGGCAGAGGACACCACACGC-------------------CCAACGCAGACGCACACA-------CTCCTGGGAGCCAGGATGCAAAGCCACAGAGCACCAGGGCGGGTCCAG-------GCTGGGATGCCGGAACGGCAGG-----GCCAGAGCAGGGTCTTACCTTCCTGCAGTCTTTGCAGAACACCGACGAGCTGCCCAGGAAGCCCAGCACCTCCCCACAGAGCAGGCACTGGGACAGGCCATTCCCCATCACGTTCCGCCTCATGGTCTCCAGCCGCTCCACCAGCCGCCTGCGGCACAGGA-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 174007 530 + 74645514 AGGAATATTTAATCCTCTGAGCATGGTGAGGTGCATGGCATCAT-gacc-acattttacaga-tgaggaacatCAGGTGTGAGATACTAAACGAGTTTTCTGAGGTCT------TAGCAGAAGGGCTAGATTCGCACCCTGACTTCTAACGCCAGCTCTGGGTCTCGTGGCTTGGGCGTGAATCTAGCAGAAGGGCTGGAAGGTACATCCACGCGACGAGACCCAGAGCTGGCCCTAGACGTCAGGCCATTTGATTTTTAAGTCTTAGTCCTTCTGGCCAAGAGGCAGAGGACACCACACGC-------------------CCAACGCAGACGCACACA-------GTCCTGGGAGCCAGGATGCAAAGCCACAGAGCACCAGGGCGGGTCCAG-------GCTGGGAT------------GG-----GCCAGAGCAGGGTCTTACCTTCCTGCAGTCTTTGCAGAACACCGACGAGCTGCCCAGGAAGCCCAGCACCTCCCCACAGAGCAGGCACTGGGACAGGCCATTCCCCATCACGTTCCGCCTCATGGTCTCCAGCCGCTCCACCAGCCGCCTGCGGCACAGGA-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 164538 542 + 75148670 aggaatatttaatcctctgagcatggtgagctgcatggcatcat-gacc-atattttacaga-tgaggaacatcaggtgtgagatactcaacaagttttctgaggtct------tagcagaagagctagattcgcaccctgacttctaacaccaggtctgggtctcgtggcttgggcatgactctagcagAAGGGCTAGAAGGTACATCCACGCGACGAGACCCAGAGCTGGCCCTAGACGTCAAGCCATTTGATTTTTAAGTCTTAGTCCTTCTTGCCAAGAGGCAGAGGATACCACATGC-------------------CCAGCGCAGACGCACACA-------CTCCTGGGAGCCAGGATGCAAAGCCACAGAGCACCAGGGCGGGTCCAG-------GCTGGGATGCCAGAACGGCAGG-----GCCAGAGCAGGGTCTTACCTTCCTGCAGTCTTTGCAGAACACGGACGAGCTGCCCAGGAAGCCCAGCACCTCCCCACAAAGCAGGCACTGGGACAGGCCATTCCCCATCACGTTCCGCCTCATGGTCTCCAGCCGCTCTACCAGCCGCCTGCAGCACAGGA-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 979246 515 - 1291538 aatgatatgtaaccctcagagcacagtgaggtgcatggtatcat-gacc-atattttacaga-tgaggaacctcaggtctgagatagtcattaggttttctgaggtca------cagaagaagagctagattcacacccTGACTTCTAACAGCAGCGCTGGGTCTTGAAGCTC-GGTGTGAATCCAGTGGGAGAGCCAGAAGATACACCCAAGCTATGCGACCCAGAGCCAGCCCTAGACATCAGGACGTTTGGTTTT----CCTTCATCCTT---GCCAAGAGGCTGAGGGTATGACA-AC-------------------CCAGCACA------------------------------------CAAGCCACAGAGCAGCAGGGCTTGTCCAGAATCGCAGCTGGGAAGGCGGAAGGACAGGACGGAGCAGGAGCAGGGTCTTACCTTCCTGCAGTCTTTGCAGAACACCGAGGAGCTGCCCAGGAAGCCCAGCACCTCCCCGCAGAGCAGACACTGGGACAGGCCGTTCCCCATCACGTTCCCCCGCAGGGTCTCCAGCCGCTCCACCAGTCGCCTGCGGC-CAGGA-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75906212 448 + 122082543 -------------------AATGTGTCTGAGTACATGTGATAGTCGCTC-CCATTTTTCAGA-CCGCGAAAGTGAGGCATAATATACTAGACCAGTTTTCTGAGGTC--------AGTATAAGAGCTGGATTCACACCCAGGTTCGCAA-------------TCTCCTTGC----------------------------------------------------CAGGGCTAGCTCTAGAAGCCACACCATCC-ATCTTCAGGGC------CTTCTTGCCAAAGAGCAGACGCTAGCA----C-------------------CACATACATATGTGCACGAC---CTGTCCTGGAAACTGGGCTGCAAAGCCACAGGGCTGCAGTTCTGACCCAT-------TCCGGGGAGCT-GAACGGTGAG-----GCCAGAGCAGGG-CTTACCTTCCTGCAGTCTTTGCAGAATACGGAGGAGCTGCCCAGGAATCCCAGCACCTCCCCGCAGAGCAGACACTGGGAGAGACCGTTGCCCATCACGTTCCTCTGCATTGTCTCCAGCCGCTCCACCAGCCGCCTGCAGCACAGGA-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15731366 495 - 61074082 ----ataattaatctttatgattttctaaggtacatgttatcat-tatctatatcttacaga-tgcggaagatagggctcaatatattagacaagttttctgaggtcatccagctagtgaaatagctagacttatacccaggtctgtgg-------------------------------------------gatccagagg-----tccACTC-------CCCAGGGTTGGCCCTAGAAGCCAGGCCATTCAACCTT-AGGCCCTAATTCTTCTTGCCGAGCAGCACAGGATACCATGTGcatacacatgcatacatggacacacacagacacatacaacatacactcaTGGAAGCCAGGGTGCAAAGCCACAGAACA--------GGTCCAG-------ACTGGGTA-------------------GCCAGAGAAGGGCCTTACCTTCCTGCAGTCTTTGCAGAACACTGATGAGCTGCCCAGGAAGCCCAGTACCTCCCCACAGAGCAGACACTGGGAAAGGCCATTCCCCATCACATTCTGCCTCATGGTCTCCAGCCGCTCCACCAGGCGTCTGCAACACAGGACA i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 139875 6799 + 73212453 M a score=251319.000000 s hg38.chr17_GL383563v3_alt 290878 186 + 375691 CACAGAGTCAGAGGGACTG-----TGCTTCCTGC----------------CTGGGCACAGTTG-CACCGAGGCCCGAAAccgtaccatgcc---acatgtgctgtcccctcacctgggatattgttccttgccccgccctt-cccctggataacagcgaatccttcaTTCACTCACCAACTATTCAGTGAGCACCT-ATGAT---TCATCAGACAC-- s panTro4.chr17 264249 185 + 82630442 CACAGAGTAAGAGGGACTG-----TGCTTCCTGC----------------CTGGGCACAGTTG-CACCGAGGCCCGAAACCGTACCATGCC---ACATGTGCTGTCCTCTCACCTGGGATATTGTTCCTTGCCCCGCCCTT-CCCCTAGATAACAGCGAATCCTTCATT-ACTGCCCAACTATTCAGTGAGCACCT-ATGAT---TCATCAGACAC-- i panTro4.chr17 C 0 M 1545 s rheMac3.chr16 176915 178 + 80904711 CACAGAGTCAGAGGGAACG-----TGCTTCCCGC----------------CTGGGCGCAGCTGCCACCGAGGCCCAAAACCGTACCGCGCC---ACATGTGCTGTCCCC-CACCCGGGAGGTTGTTCCT-----CGCACTT--CCCTGGCTCACTGCGAATCCTTCGTTCACTCACCAACTATTCACTGAGCACC---TGAG---TCATCAGACAT-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 182356 178 + 80997621 CACAGAGTCAGAGGGAACG-----TGCTTCCCGC----------------CGGGGCGCAGCTGCCACCGAGGCCCAAAACCGTACCGCGCC---ACATGTGCTGTCCCC-CACCCGGGAGGTTGTTCCT-----CGCACTT--CCCTGGCTCACTGCGAATCCttcgttcactcaccaactattcactgagcacc---tgag---tcatcagacat-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 174537 178 + 74645514 CACAGAGTCAGAGGGAACG-----TGCTTCCCGC----------------CTGGGCGCAGCTGCCACCGAGGCCCAAAACCGTACCGCGCC---ACATGTGCTGTTCCC-CACCCAGGTGGTTGTTCCT-----CGCACTT--CCCTGGCTCACTGCGAATCCTTCGTTCACTCACCAACTATTCACTGAGCACC---TGAG---TCATCAGACAC-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165080 182 + 75148670 CACAGAGTCAGAGGGAACC-----TGCTTCCTGC----------------CTGGGCGCAGCGGCCACCGAGGCCCAAAACCGTACCGCGCCGCTACATGTGCTGTCCCC-CACCCGGGAGGTTGTTCCT-----CGCACTT-CCCCTGGCTCACTGCGAATCCttcgttcacccaccaactattcactgagcacc---ggag---tcatcagacac-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 979761 202 - 1291538 CACAGAGTCAGAGGAAATG-----CGCCTCCCACTCCAGCCCAACCACTGCCTGGCACAGCTGCCACCGAGGCCCAGAGCTGAACCATGCC---ATGCA-GCTGTTCCC-TCACGAGGGTGTCTTTCTTCGCCCTGCCCTT-CCCCAGGCTAACTGTGAATCTttcattcacttgccaactattcacctagcacc---taagatctcatcagatgc-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75906660 144 + 122082543 CAGGGCGTCAGAGGGAAGG-----TGCTT---------------------CAGAGGACTG----CAGTGGGAGTCTAAGC--------------ATACACGCTCACCTC----------------ACCT-----CGCCCCTTCCCCTGGCTGACTCCCAGTCACTGGTTAACTTG----CTGTTAACAGAGCAGCTCGGGTG---TTGCTGCACAC-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15731861 182 - 61074082 CACAGAGTCAGATGGAATGTTTCCTATCTTCAAC----------------CTGACCAC------TGCccaggtatggctccctacatggcc----catgtgctgttccctcacctggggtactgttccctgccccacttcttttccaggctacctcctaatcattcattcactcaccaactatt----gagtacc---aaca---acgtgccacaccc i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M a score=171655.000000 s hg38.chr17_GL383563v3_alt 291064 102 + 375691 TGGGAATACTGTAGCAAACAAGCCAG----AGACAGACATGGTCCCTGTTCTC-ATGGAACTTACCTTCAATAAGGAAGAAAATTCATAAGCAAGAAAACAAGCAAA s rheMac3.chr16 177093 102 + 80904711 GGGGAATATCGTAGCAAACACGCGAG----AGACACACATGGTCCCTGCTCTC-ATGGAACTTGCCTTCAATAAGGAAGGAAATTCATAAGCAAGAAAACAAGCAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 182534 102 + 80997621 ggggaatatcgtagcaaacacgcgag----agacacacatggtccctgctctc-atggaacttgccttcaataaggaaggaaattcataagcaAGAAAACAAGCAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 174715 102 + 74645514 GGGGAATATCGTAGCAAACACGCGAG----AGACAGACAtggtccctgctctc-atggaactTACCTTCAATAAGGAAGGAAAttcataaacaagaaaacaagcaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165262 102 + 75148670 ggggaatatcgtagcaaacacgcgag----agacagacatggtccctgctctc-atggaacttaccttcaataaggaaggaaattcataagcaagaaaacaagcaaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 979963 102 - 1291538 tggggaaatggcagcaaactca-gtc----agacaaacaaggtctctgttctctctggaatgtatcttcagtaaggaagaaaattcatgagcaagtcaaaaagaaga i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75906804 102 + 122082543 TGGAAATAGTGTAACTAATAGGCCGG----ATACACACATGGCCCCGGCTCTC-TTGGAATTTAGGTTCAACAAAGAGGAAGATTCATGAACAAGAAAACAAGCCAA i mm10.chr11 C 0 I 1422 s canFam3.chr9 15732043 99 - 61074082 taggaatattgcagcaagcaagccagagatagacagacatgatccctgctctc-acagaacttacgtttaataaag-------tccataaacaagtcaacaagcaaa i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=44004.000000 s hg38.chr17_GL383563v3_alt 291166 42 + 375691 CTGG-TTTCAGATAGAGAGCAGCGCTATGAAATGGAAATAGTG s rheMac3.chr16 177195 35 + 80904711 CTGA-TTTCAGATAGGGAG-------ATGAAATGGAAATAGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 182636 35 + 80997621 CTGA-TTTCAGATAGGGAG-------ATGAAATGGAAATAGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 174817 35 + 74645514 ctgA-TTTCAGATAGGGAG-------ATGAAATGGAAATAGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165364 35 + 75148670 ctga-tttcagatagggag-------acgaaatggagatagtg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 980065 43 - 1291538 ctgattttcagagagagagcagcgctgtgaaatggaataggtg i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15732142 41 - 61074082 ctga-cttcagacaaggga-agtgctatgaaatcaaataaGTG i canFam3.chr9 C 0 I 1161 e mm10.chr11 75906906 1422 + 122082543 I e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=14661.000000 s hg38.chr17_GL383563v3_alt 291208 9 + 375691 GGGGGAGGG s rheMac3.chr16 177230 9 + 80904711 GCGGGAGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 182671 9 + 80997621 GCGGGAGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 174852 9 + 74645514 GCgggaggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165399 9 + 75148670 gggggaggg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 980108 9 - 1291538 ggggcaggg i calJac3.chrUn_GL286409 C 0 M 663 s canFam3.chr9 15733344 9 - 61074082 GGGGGAGGG i canFam3.chr9 I 1161 C 0 e mm10.chr11 75906906 1422 + 122082543 I e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=79479.000000 s hg38.chr17_GL383563v3_alt 291217 153 + 375691 AGGG----------GGAGGGAGGGGGAGGGAGATTGAGGGGA-GGGAGGGGGAGGGAGACTGAGGGGAGG------GGGGG-------------------GAGGGAGATTGAGGGGAGGGAGGGGGAGGGAGACTGAGGGGAGGG------GGGGGAGGGAGA---TTGAGGGGAGGGAG-------------------------GGGGAGGGAGACTGAGGA s rheMac3.chr16 177239 161 + 80904711 AGAGGGATT-----GCAGGGAGGGCAAGAGAGACTgaggggaggggagggggagggagactgaggggagggagattgaggg-------------------gagggagattgaggg----------gagggagactgaggggaaaga-----gggtgagggaga---ctgaggggagggaga---------ttg-----------aggggagggagactgcggg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 182680 175 + 80997621 AGAGGGATT-----GCAGGGAGGGCAAGAGAGACTGAGGGGAGGGGAGGGGGAGGGAGACTGAGGGGAGAGAGGGTGAGGGAGACTGAGGGTGGGGGGTTGAGGAAGATTGAGGG----GGGTGTGAGGAAGATTGAGGGCAGGGA-----AGGCAAGGGAGA---TTGAGGGGAGAGAGA---------TTG-----------AGGGGA-----------AA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 174861 165 + 74645514 agggggaattggggggatggagggcaagagagactgagggga-gggagggcaagggagactgaggggaggaagactgaggg-------------------gagggagactgaggg----------gagggagactgagggagactg-----aggggagggaga---ctgaggcgagggaga---------ctg-----------aggcgagggagactgaggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165408 160 + 75148670 agagggatt-----gcagggagggcaagagagattgagggga-gggagggcgagggAGACTGAGGGGAGGGAGACTGAGGG-------------------GAGGGAGACTGAGGG----------GAGGGAGACTGAGAGGAGGGAGACTGAGGGGAGGGAGA---CTGAGGGGAGGGAG-------------------------GGCGAAGGAGACTGAGGG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15733353 167 - 61074082 --------------------CAGGTGAGGAAGCCAGC------AGGAGGTGGTAGGAGGCCCAGTGAATGGGCACTGAGT--------------------CTGGGAGACAGAGGC----AACATCCATGGAGATAGGGGGCGAGG------AGGTAAGAGAGAGATCTGGGGTGATACAGAGGTTTTGGTTTGAGCAAGTGGGTAGAGGAAGCAGCTAGAGGA i canFam3.chr9 C 0 I 1119 e mm10.chr11 75906906 1422 + 122082543 I e calJac3.chrUn_GL286409 980117 663 - 1291538 M e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=9315.000000 s hg38.chr17_GL383563v3_alt 291370 44 + 375691 GAGGGAGGGGGAGGGAGACTGAGGGGATGGAGGGGGAGGGAGAC s rheMac3.chr16 177400 30 + 80904711 gagggc----aaaggagattgaggggagggagac---------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 182855 28 + 80997621 GAGGGT----GAGGGAGACTGAGGGGAGGGAG------------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 175026 24 + 74645514 gag----------ggagattgaggggagggagac---------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165568 34 + 75148670 GAG----------GGAGACTGAGGGGAGGGAGGGCGAGGGAGAC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e calJac3.chrUn_GL286409 980117 663 - 1291538 M e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=13014.000000 s hg38.chr17_GL383563v3_alt 291414 38 + 375691 TGAGGGGAGGGAGGGGGAGGGAGACTGAGGGGAGGGAG s rheMac3.chr16 177430 34 + 80904711 tgaggggaggg----caaaggagattgaggggagggag i rheMac3.chr16 C 0 I 26 s macFas5.chr16 182883 33 + 80997621 -GGCGGGGGGG----CGAGGGAGATTGAGGGGAGGGAG i macFas5.chr16 C 0 I 5 s papAnu2.chr16 175050 38 + 74645514 tgaggggagggagactgagggagactgaagggaaggag i papAnu2.chr16 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e calJac3.chrUn_GL286409 980117 663 - 1291538 M e chlSab2.chr16 165602 0 + 75148670 C e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=2234.000000 s hg38.chr17_GL383563v3_alt 291452 10 + 375691 GGGGAGGGAG s macFas5.chr16 182921 10 + 80997621 GGGGAGGGAG i macFas5.chr16 I 5 C 0 s papAnu2.chr16 175088 10 + 74645514 ggcaagggag i papAnu2.chr16 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e calJac3.chrUn_GL286409 980117 663 - 1291538 M e chlSab2.chr16 165602 0 + 75148670 C e rheMac3.chr16 177464 26 + 80904711 I e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=905.000000 s hg38.chr17_GL383563v3_alt 291462 15 + 375691 ACTGAGGGGAGGGAG----- s macFas5.chr16 182931 20 + 80997621 ACTGAGGGGAGGGAGACTGA i macFas5.chr16 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e calJac3.chrUn_GL286409 980117 663 - 1291538 M e chlSab2.chr16 165602 0 + 75148670 C e papAnu2.chr16 175098 0 + 74645514 C e rheMac3.chr16 177464 26 + 80904711 I e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=14897.000000 s hg38.chr17_GL383563v3_alt 291477 65 + 375691 GGGGAGGGAGACTGAGGGGAGGGAG-----GGGGAGGGAGACTGAGGGGAGGGAGGGGGAGGGACATTGA s rheMac3.chr16 177490 66 + 80904711 ggggagggagactgaggggagggagattgaggggagggagactgaggggagggcaaaggag----attga i rheMac3.chr16 I 26 C 0 s macFas5.chr16 182951 66 + 80997621 GGGGAGGGAGACTGAGGGGAGGGAGATTGAGGGGAGGGAGACTGAGGGGAGGGCAAAGGAG----ATTGA i macFas5.chr16 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e calJac3.chrUn_GL286409 980117 663 - 1291538 M e chlSab2.chr16 165602 0 + 75148670 C e papAnu2.chr16 175098 0 + 74645514 C e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=6925.000000 s hg38.chr17_GL383563v3_alt 291542 33 + 375691 GGGGAGGGAGGGGGAGGGACATTGAGGGGAGAG s rheMac3.chr16 177556 23 + 80904711 ggggagggag----------attgaggggaggg i rheMac3.chr16 C 0 I 14 s macFas5.chr16 183017 23 + 80997621 GGGGAGGGAG----------ATTGAGGGGAGAG i macFas5.chr16 C 0 M 9361 s calJac3.chrUn_GL286409 980782 31 - 1291538 GGGGAGGTCgggagagggtgac--aggggaggg i calJac3.chrUn_GL286409 M 663 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e chlSab2.chr16 165602 0 + 75148670 C e papAnu2.chr16 175098 0 + 74645514 C e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=13490.000000 s hg38.chr17_GL383563v3_alt 291575 87 + 375691 AG-----GGGGAGGGACATTGA-GGGGAGGGAGGGGGAGGGACATTGAGGGGAGGGAGGGGGAGGGACATTGAGGGGAGGGAGGGGGAGGGAC s rheMac3.chr16 177593 92 + 80904711 agattgaggggagggagattga-ggggagagagggcaaaggagactgaggggagggagggcgagggagactgaggggaaggagggcgagggag i rheMac3.chr16 I 14 C 0 s calJac3.chrUn_GL286409 980813 86 - 1291538 ag-----ggagagggagatggagggggagggagggagagggagaagaaggg--tggaagagaagggagatggaggggagggagggagatggag i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e chlSab2.chr16 165602 0 + 75148670 C e papAnu2.chr16 175098 0 + 74645514 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=726.000000 s hg38.chr17_GL383563v3_alt 291662 2 + 375691 AT s rheMac3.chr16 177685 2 + 80904711 aC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 175098 2 + 74645514 at i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 980899 2 - 1291538 aT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e chlSab2.chr16 165602 0 + 75148670 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=910.000000 s hg38.chr17_GL383563v3_alt 291664 1 + 375691 T s rheMac3.chr16 177687 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 175100 1 + 74645514 t i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165602 1 + 75148670 T i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 980901 1 - 1291538 T i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 264139 981 - 81552678 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=319019.000000 s hg38.chr17_GL383563v3_alt 291665 312 + 375691 GAGGGACAGGGGCATGTTCCATGGG-ACCAGCGAAGGCTCT----------GTGGACTCACAGCTGAAGAATGAGCCATGCCATCTGGCCTGTCTTTCCCACTGTAAAGATAAgg---ccgggcagggtggct-catgcctgacatcccagccctttgtgaggctgaggcaggcggatcgcttgagcccagaagttcgagagcagcctgggtaaca-------------tagtgagaccccatctct-------acaaaaaaaataaaataaaaaatagctgggtgtggtggtg--------cccacgcacggtcctagctacttaaggctgaggtggggaggtcgcttgagccc s nomLeu3.chr19 265120 329 - 81552678 GAGGGTCAGCGGCATGTTCCATGGGGACCAGCAAAGGCTCTCGGAGATCATTTGGATTCGCAGCTGAAGAATGAGCCATGCCATCAGGCCTGTTTTTCCCACCATAAAGATAAGGAggccgggcagggtggcttcacgtctgaaatcccagcccttggtgaggctgaggcaggcggatcacttgagcccaggagttcgagaccagcctgggtaacaggctggtatttttttgtgagaccccatctct-------acaaaaataa--aaataaaaaatagctgggtgtggtg-----------------cacggtcctagctacttaaggctgaggtggggagatcgcttgagccc i nomLeu3.chr19 M 981 C 0 s rheMac3.chr16 177688 328 + 80904711 GAGGGACAGTGGCATGTTCCATGGGGACCAGCGATGGCTCTCGGAGAACAGGTGGACTCACAGCTGAAGAATGAGCCATGCCATCTGGTCTGTTTTTCCCACTGTAAAGACAGGAAggccagacacggtggct-cacgcctggaatcccagccctctgtgaggctgaggcaggcggatcgcttgagcccaggagttcaagaccagcctgggtagca-------------tagtgagaccccatctct-------acaaaaaaca------aaaaaaaagctgggtgtggtggtgccctggtacccacccgcggttctagctacttaaggctgaggttgggggatcgcttgagccc i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 175101 326 + 74645514 gagggacAATGGCATGTTCCATGGGGACCAGCGATGGCTCTCAGAGAACAGGTGGACTCACAGCTGAAGAACGAGCCATGCCATCTGGCCTGTTTTTCCCACTGTAAAGACAGgaaggccagacacggtggct-cacgcctgaaatcccagccctttgtgaggctgaggcaggcggatcgcttgagcccaggagttcaagaccagcctgggtaaca-------------tagtgagagcccgtctct---------aaaaaaaa------aaaaaaaagctgggtgtggtggtgccctgGTACCCACCCGCGGTTCTAGCTACTtaaggctgaggttgggggatcgcttgagccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165603 335 + 75148670 GAGGGACAGTGGCATGTTCTGTGGGGACCAGCGATGGCTCTCGGGGAACAGGTGGACTCACAGCTGAAGAATAAGCCACACCATCTGGCCTGTTTTTCCCACTGTAAAGACAGGAAggccggacacggtggct-cacgcctgaaatcccagccctttgtgaggctgaggcaggcggatcacttgagcccaggagttcaagaccagcctgggtaaca-------------tagtgagaccccgtctctaaaaaaaaaaaaaaaaa------aaaaaaaagctgggtgcggtggtgccctggtacccacccacggttctagctacttaaggctgtggttgggggatggcttgagccc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 980902 314 - 1291538 GAAGGGCAGGGAAATGCCCCATAGGGACCAGTGAATGCTCTGGGAGAACTCGTGGACTCACAGCTGAAGAATGAGCCACTCCAAGAGGCCTGTTTCTCCCATGGCAAAGATAAGAAggctgggcggggtggct-cttgcctgttatcccagctctttgtga-gttgaggcaggtggattgtgtgagcccaggagttagagaccagccctggtaaca-------------tagtgagaacccgtgtct-------tacaaaaaaa------aaaaaagagctgtatgtggt------------cacat-catagtcctggctacttgaggctgaggtaaggggatggctggagccc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75906906 1422 + 122082543 I e canFam3.chr9 15733520 1119 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=67528.000000 s hg38.chr17_GL383563v3_alt 291977 84 + 375691 aggaagttgaggctgcagtgatct-----gtgatagcaccactgcattctaatctaca---ctgcagagtgagaccctgtcccccccaaaaa s nomLeu3.chr19 265449 78 - 81552678 aggaagttgaggctgcagtgatct-----gtgattgcaccactgcactctaatctaca---cgacagagtgagaccttgtctc------aaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 178016 77 + 80904711 aggaagttgaggctgcagcgatcc-----gtgatcgcacccctgcactccaatctaca---cgacagagtgagaccctgtct-------aaa i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 175427 74 + 74645514 aggaagttgaggctgcagcgatcc-----gtgatcacacccctgcactccaatCTAca---cgaca----gagaccctgtctc------aaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 165938 77 + 75148670 aggaagttgaggctgcagcgatcc-----gtgatcacacccctgcactccaatctaca---cgacagagtgagaccctgtct-------caa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 981216 73 - 1291538 aggaagctgaggctgccaagatct-----gtgatcg--tcactgctctccggcctaga---cgacagagttagacc-tgtctc--------a i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75908328 79 + 122082543 AGGCCGTTGACGCAGCAGTCATCTTTCTAGTGGGGGCATCGC--CTCCTAAAGCTGCCTTTCTGCTGTGTCTGACTTT-----------TAA i mm10.chr11 I 1422 C 0 e canFam3.chr9 15733520 1119 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=273879.000000 s hg38.chr17_GL383563v3_alt 292061 357 + 375691 aaaaagaaaaggaaaagaaa-------------------------------------------gaTCAAAGATACATAGGAGGC---CAGAATGAAATCAATTCCT---------------GCCCAG----TGCATTTGTGTCTTCCTACTTGTGCTTTTCTGTGTTTTTCAGATT-TTCTAGGAAATATGAATTGCTTTCGTAATT----AAACACTGGACACGATGGAAGTGCTGGAAGACTGAGCTGTGGTCGGCGCTGGA-GGCGGAGGCCAGGAGAGGCACGTAGAGCCA--GGCGGGGAGCGGCTC--CTGCTGGAGCCTTTCAGGGGCGACCTG-----TGGC---TTGGCCTCCACCTGAAC------CCCTCCCTTGGCTGAACCACAGCTGAC----------------CTGCAGGTGTGCACAGCCGAACAGCTCCTGGGAGGCTTCACCA s nomLeu3.chr19 265527 351 - 81552678 aaaaaaaaaaagaaaagata-----------------------------------------------aaagaTACGTAGGAGGC---CAGAATGAAATCAATTCCT---------------GCCCAG----TGCATTTGTGTCTTCCTACTTGTGCTTTTCTGTGTTTTTCAGATT-TTCTAGGAAGTATGAATTGCTTTCGTAATT----AAACCCAGGACACGATGAAAGTGCAGGAAGAGTGAGCTGTGGTGGGCGCTGGA-GTCGGAGGCCAGGAGAGGTAGGTAGAGCCA--GCCGGG-AGCGGCTC--CTGCTGGAGCGTTTGAGGGGTGACCTG-----TGGC---TCAGCCTCCACCTGAAC------CCCTCCCTTGGCTGAACCACAGCTGAC----------------CTGCAGGTGTGCACAGCCCAACAGCCCCTGGGAG-CTTCACCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 178093 340 + 80904711 aaaaaaaaaaaagaaagaaa-----------------agagaaagaaaaag---aaaagaaaagaTG-AAGATACGTAGGAGG-CAGCAGAATGAAATCGATTCCC---------------GCCCAG----CGCATTT-TTTCTTCCTACTTGTGCTTTTCTGTGGTTTTCAGATT-TTCCAGGAAATACGAATTTCTTTTGTAATTAAACAAACACAGGACACGATGAAAGTGCTGGAAGACTGAGCTGTGGTGGGCGCTGGA-GTCGGAGGCCGGG--------------------------AGCGGCTC--CTGCGGGAGCTTTCGAGGG---------------------------CGACCCGAA-------ACCTCCCTTGGCTGAACCACAGCTGAC----------------CCGCAGGTGCACAGAGCCGAACAGCCCCCGGGGCGCTTCACCA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 175501 342 + 74645514 aaaaaaaagaaagaaagaaa-----------------agagaaagaaaaag---aaaagaaaagatgaaagatacGTAGGAGGCCAGCAGAATGAAATCGATTCCT---------------GCCCAG----TGCATTT-TTTCTTCCTACTCGTGCTTTTCTGTGGTTTTCAGATT-TTCTAGGAAATACgaatttcttttgtaattaaaCAAACACAGGACACGATGAAAGTGCTGGAAGACTGAGCTGTGGTGGGCGCTGGA-GTCAGAGGCCGGG--------------------------AGCGGCTC--CTGCGGGAGCTTTTGAGGG---------------------------CGACCCGAA-------CCCTCCCTTGGCTGAACCACAGCTGAC----------------CCGCAGGTGCACAGAGCCAAACAGCCCCCGGGGCGCTTCACCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166015 379 + 75148670 aaaagaaagaaagaaagaaagagagaaagagagaaagagagaaagagagagagaaaaagaaaagatgaaagaTATGTAGGAGGCCAGCAGAATGAAATCAATTCCT---------------GCCCAG----TGCATTTGTGTTTTCCTACTTGTGCTTTTCTGTGTTTTTCAGATT-TTCTAGGAAATACGAATTTCTTTTGTAATTAAACAAACACAGGACACAATGAAAGTGCTGGAAGACTGAGCTGTGGTGGGCGCTGGA-GTGGGAGGCCAGG--------------------------AGAGGCTC--CTGCGGGAGCTTTCGAGGG---------------------------CGACCCAAA-------CCCTCCCTTGGCTGAACCACAGCTGACCCGCAGGTGCGCAGAGCCGCAGGTGCACAGAGCCGAACAGCCCCTGGGGCGCTTCACCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 981289 332 - 1291538 aaagtaaaaaaagaaagaTA-----------------------------------------------CAAGCCATGCAGGAGAC---CAGAATGAAATCGATTCCA---------------ATCAAGGCCCTGCATCTGTAT-TCCCTACTCCTGCTTTTCTGTG-TTTCCAGAGT-TTCTAGGAAACAGGCATTGCTTT-GTCACT----AAACACAGGTCACAGTGAAAGTGCTGGAAGAG-GAGCTGTGGTTGGGGCTGGA-CGCTGTAGGCTGG--------------------------AGAAGTGC--ACGCAGATGGCCAGGAGGGGCGACCC------TGGC---TCAGCCTGCAGCTGAACCTCCCTCCCTCCCTTGGCTG-ACCCTGGCACAG----------------CTGCAGGTGTGCAGAGCTCAACAGCT-CTGGGGCACTTTGCCA i calJac3.chrUn_GL286409 C 0 I 2 s mm10.chr11 75908407 348 + 122082543 AAAATGATCATGAAACTAAT-------------------------------GGGAAAAGATGAGCAGAAAAATA---ACGAGAT---CAGAACGAGCTGAGTTCCTACGCAAAGCAGCCGAACCCAG----TACAGCCAAGCTCCCCTATCTGAGCTTGTC---------CAAATCAACCTACGACAGGAAAA------------------AGGCACACGCCATCA------TGTTGGATGGCCCAGCC----------CTGGATGTGAGAGACCAGGAGAGAAGCTGAAAACCC--ACTGGAGGGCGCCTC--CTGTTGGGGCCTCAGGTGGGGGGCCAATTCACTGACCAGTCAGTCTCCTCTTGAGT------CCATTCCTTGCCTGAGCTGCAGGAGGA----------------TACTCAGAGCCCAAATCCAAAATGCTCCTGGG----CTCACTA i mm10.chr11 C 0 C 0 s canFam3.chr9 15734639 359 - 61074082 AAACAAAATACTAAAAGACG--------------------------------------------ACTAAAAGAACA-AGGAGAG---CAAAATCAAATGAATTCCT---------------GCCCAG----TGTAGTGAACT----GCATTTGTGCTTTTCTGTGTTTTTCCAATT-TTCTAGGAGGTATGAACTGCTTTTGTAATT----AAACAATGGACACAAC-AAACTGTCTGCAGGCTGTACAGAAGTCAGCTCTGGGTGCAGGGGGCCAGGAGAAGAGCTTAGAACACATGCTGGAGAGCAGCTCTTCTCTTGGAACCCTCACTGGGACACGGAGGTCTAGGT---TCAATTCCAACTTGAAT------CCCTCCTCTGGCTGAACCACAGCCAAC----------------CTTCCTGTATGTGAAG-TGAAGAGCCCCTGATGCATGTCACCA i canFam3.chr9 I 1119 C 0 e macFas5.chr16 183040 9361 + 80997621 M e ponAbe2.chr17 139875 6799 + 73212453 M e panTro4.chr17 264434 1545 + 82630442 M a score=67668.000000 s hg38.chr17_GL383563v3_alt 292418 110 + 375691 GGCTCATTCA---CGCCCTCAGCATGGGGCGCACAGCTCAGCTA-------GCAGCCCCG---------TCTCACAGAGGGGTGTCCTGAGGCCTCAGCGGGCTGGG--TTACACTCC-CAGAGTTCAGACA s ponAbe2.chr17 146674 121 + 73212453 GGCTCATTCA---CGCCCTCAGCATGGGGTGCACACCTCAGCTA-------GCAGCTACGGTACAAGGGTCTGACAGAGGGGTATGCTGAGGCCTCAGCGGCCTGAGAATTACACTCC-CAGTGTTCAGGCA i ponAbe2.chr17 M 6799 C 0 s nomLeu3.chr19 265878 98 - 81552678 GGCTCATTCA---CGCCCTCAGCCTGGGACGCGCACCTCCGCTAGCAGCTTGCAGCCCCG---------TCTCACAG-------------------AGCGGGCTGGG--TTACACTCC-CGGTGTTCAGGCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 178433 108 + 80904711 CGCTCATTCG---CGCCCACAGC-CGGGGCGCACACCCCAGCTG-------CTAGCGCCG---------TCTGAC--AGACCTATCCTGAGGCCTCAGCAGGCTGAG--TTACACTCCGGGGTGTTGAGGCA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 175843 108 + 74645514 CGCTCATTCG---CGCCCACAGC-CGGGGCGCACACCTCAGCTG-------CTAGCGTGC---------TCTGAC--AGGCCTATCCTGAGGCCTCAGCAGGCTGAG--TTACACTCCGGGGTGTTGAGGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166394 110 + 75148670 CGCTCATTCG---CGCCCACAGC-CGGGGCGCACACCTCAGCTG-------CTAGCGCCG---------TCTGACAGAGGCCGATCTCGAGGCCTCAGCAGGCTGAG--TTACACTCCGGGGTATTGAGGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 981623 87 - 1291538 TGAGCATTCC---TGCCCACACC--CAGGCGCACATC-CAGCCT-------CTGGCCTCA---------TCCGAC--AGGGGTATCCTGAGGCTCCGG--GGCTGTG-------------------CAGGAA i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75908755 71 + 122082543 ---TTCCCTG---CACACCTGTCTGGGGTCTTGAATC---AATG-------CCATCCCCA---------GCTCACAGCTGCCTAC------ATCCCAGAGGG------------------------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15734998 111 - 61074082 TGCTCATTCATCCCCCCCATGGCCTGGGGCCCACACAGGAGCCA-------CTATCCACT---------TCTTACAGAGGAGTGTATTAAGGCTTTGTGGGGCTGGG--TTACACATC-TACACCTCAGA-- i canFam3.chr9 C 0 C 0 e macFas5.chr16 183040 9361 + 80997621 M e panTro4.chr17 264434 1545 + 82630442 M a score=1017251.000000 s hg38.chr17_GL383563v3_alt 292528 380 + 375691 GAGCACCCTTCAGCAAGGGC----TGGAGTCAGGGACCTCCTCACCCACTCCCAGAGGTAAATAGCAA-AACCAGGACCCGGAGTGCCGGCCTCCCAGTCCCCTGCGCTTGCGCCAAA-GCCCTTGCTGTCCTCCCACTGAGCTGGCCCCGGCCCCG-------------CCTCACCCGATTCTCTGCTGCTCCAGGACGTCGAGCCGCTCTGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCCGCCGGGCTGAGGTGCTGCTTCCTCCTCTGCTTCTCCGTCTGGTAGGTGTGCACGGACCAGCCCGTCTGCAGCCTCGAGAGGGAACAGCACAGACGGCGTGGAGGCCTCCCCGGTGCAAACTCCGGCAGCC----CC----TACCACATCCACCAAG-CCC s panTro4.chr17 265983 379 + 82630442 GAGCACCCTTC-GCAAGGGC----TGGAGTCAGGGACCTCCTCACCCACTCCCAGAGGTAAATAGCAA-AACCAGGACCCGGAGTGCCGGCCTCCCAGTCCCCTGCACTTGCGCCAAA-GCCCTTGCTGTCCTCCCACTGAGCTGGCCCCAGCCCCG-------------CCTCACCCGATTCTCTGCTGCTCCAGGACGTCGAGCCGCTCGGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCCGCCGGGCTGAGGTGCTGCTTCCTCCTCTGCTTCTCCGTCTGGTAGGTGTGCACAGACCAGCCCGTCTGCAGCCTCGAGAGGGAACAGCACAGACGACGTGGAGGCCTCCCCGGTGCAAACTCCGGCAGCC----CC----TACCACATCCACCAAG-CCC i panTro4.chr17 M 1545 C 0 s ponAbe2.chr17 146795 381 + 73212453 GAACACCCTTCGGCAAGGGC----TGGAGTCAGTGACCTCCTGACCCACTCCCGGAGGTGAATAGCAA-AACCAGGACCCGGAGTGCCGGCCTCCCAGTCCCCTGCGCTTGCGCCAAA-GCCCTTGCTGTCCTCCCACTGAGCTGGGCCCAGCCCCG-------------CCTCACCCGATTCTCTGCTGCTCCAGGATGTCGAGCCGCTCGGCCCTCTGGATGACCTGCAGGATGATCTCCACCTCCGCGGGGCTGAGGTGCTGGCTCCTCCTCTGCTTCTCCGTCTGGTAGGTGTGCACAGACCAGCCCGTCTGCAGCCTCGAGAGAGAATAACACAGACGGCGTTGAGGTCTCCCGGGTGCAAACTCCGGCAGCC----CC----TACCACATCCACCAAGCCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 265976 380 - 81552678 GAGCACCCCTCAGCAAGGGC----TGGAGTCAGTGACCTCCTGACCCACTCCCAGAGGTGAAAAGCAG-CACCAGGACCCGGAGTGCCGGCCTCCCGGTCCCCTGCGCTTGTGCCAAA-GCCCTTGGTGTCCTCCCACTGAGCTGGCTCCGGCCCCG-------------CCTCACCCGATTCTCTGCTGCTCCAGGACGTCCAGCCGCTCGGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCTGCAGGGCTGAGGTGCTGGTTCCTCCTCTGCTTCTCCGTCTGGTAGGTGTGCACGGACCAGCCCGTCTGCAGCCTCGAGAGGGAATAACCCAGACGGCGTTGAGGCCTCCCCGGTGCAAACTCCGGCAGCC----CC----TACCACATCCACCAAG-GCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 178541 355 + 80904711 --------------------------GAGCCAGTGACCTCCTGACCC-CTCCCAGAGGTGAAATGCAG-CACCAGGACGCAGCGTGCCGGCCTCCCAGTGCCCTGTGCTTGCACCAAA-GCCCTTGCTGTCCTCCCACTGAGCTGGCTCCGGCCCCG-------------CCTCACCCAATTCTCTGCTGCTCCAGGACGTCCAGCCGCTCGGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCCGCCGGGCTGAGGTGCTGGTTCCTTCTCTGCTTCTCCGTCTGGTAGGTGTGCACAGACCAGCCTGTCTGCAGCCTCGAGAGGGAGTA--ACAGACGGCGTTGAGGCCTCCCCGGTGCAAACTCCCGCAGCC----CC----TACCACATCCACCAAG-CCC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 175951 357 + 74645514 --------------------------GAGCCAGTGACCTCCTGACCC-CTCCCAGAGGTGAAATGCAG-CACCAGGACGCAGCGTGCCGGCCTCCCAGTCCCCTGTGCTTGCACCAAA-GCCCTTGCTGTCCTCCCACTGAGCTGGCTCCGGCCCCG-------------CCTCACCCAATTCTCTGCTGCTCCAGGACGTCCAGCCGCTCGGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCCGCCGGGCTGAGGTGCTGGttccttctctgcttctctgtctgGTAGGTGTGCACAGACCAGCCTGTCTGCAGCCTCGAGAGGGAGCAACACAGACCGCGTTGAGGCCTCCCCAGTGCAAACTCCTGCAGCC----CC----TACCACATCCACCAAG-CCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166504 357 + 75148670 --------------------------GAGCCAGTGACCTCCTGACCC-CTCCCAGAGGTGAAATGCAG-CACCAGGACCCAGCGTGCCGGCCTCCCAGTCCCCTGGGCTTGCACCAAA-GCCCTTGCCGTCCTCCCACTGAGCTGGCTCCAGCCCCG-------------CCTCACCCAATTCTCTGCTGCTCCAGGACGTCCAGCCGCTCGGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCCGCCGGGCTGAGGTGCTGGTTCCTTCTCTGCTTCTCCGTCTGGTAGGTGTGCACGGACCAGCCCGTCTGCAGCCTCGAGAGGGTGTAACACAGACGGCGTTGAGGCCTCCCCGGTGCAAACTCCCGCAGCC----CC----TACCACATCCACCAAG-CCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 981710 377 - 1291538 GAGCACCCTTCAGGACAGGC----TGGAGTCCGTGACATTCAGACTCACTCCCAGAGATGAAAAGCAG-CAGCAGGAGCCAGAGGGCCAGCCTCCCAGTCCCCGGGATTGGCACCAGA-GCCCCTGCTGCCCTCCGGCTGAGCTGGCTC---CCATG-------------GCTCACCCGATTCTCTGTTGCTCCAGGACGTCCAGCCGCTCGGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCTGCGGGGCTGAGGTGCTGGTCCCTCCTCTGCTTCTCCGTCTGGTAGGTGTGCACAGACCAGCCCGTGTGCAGCCTGGAGAGGGAACAGCACAGATGACGCTGAGGCTGAGGCAGCGCAAACCCCAGCAGCC----CC----TGCCACATCCATCAGG-CCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75908826 303 + 122082543 ----------------GGGCAATGAGAAGCTGGGGCCAGCCTGACTC-TTTGCAGA--------------------------------------CCAGCCCCCTG---------CAGA-CTCCCTGCT--------------CAGTGCCCGGACTCT-------------GCTTACCCAATTCTCTGCTGCTCCAGGATGTCTAGCCTCTCTGCTCTCTGGATGACCTGAAGGATGATCTCCAGCTCTCCGGGGCTCAGGCACTGGCTCCTCCTCTGCTTCTCCGTCTGGTACGTGTGCACAGACCAGCCCGTCTGCAGCCTTGGGAGAGAATAGTATGGTTGGAGGTAAGAC--------GACAGCCCACGACAGCCGTAACC----CAGTGTACCCACAAAG-CCC i mm10.chr11 C 0 I 48 s canFam3.chr9 15735109 368 - 61074082 -------------------------AGTGTTCGGGCAGAGCAGACTCACTCCCAGGGGT----AGCAGTCACTAGGACTCAGGGCGCCA--TTCTCAGCCCATGGATCTGACACAAAAGGACTTTGCTTCCCTCTCCAGGATCTTGCTTCTACCCCAGCTCAGAAGCAGCCCTTACCCAATTCTCTGCTGCTCCATGACATCCAGCCGCTCTGCCCTCTGGATGACCTGCAGGATGGCCTCCACCTCGGCTGGGCTGAGGCATTGGCTCTTCCTCTGCTTCTCTGTCTGGTAGGTGTGCACAGACCAGCCTGTCTGCAGCCTGGAGAGAGAACA---CAGCCAGCCTTGAGGCCACCACAGTGCAAACTCAGGCCTCC----CCATAGTGCCAC-TTCACAAAG-CCC i canFam3.chr9 C 0 C 0 e macFas5.chr16 183040 9361 + 80997621 M a score=54278.000000 s hg38.chr17_GL383563v3_alt 292908 26 + 375691 -CCCCG-----------AGAACAGTCAGTGGACGGCCC s panTro4.chr17 266362 26 + 82630442 -CCCCG-----------AGAACAGTCAGTGGACGGCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147176 26 + 73212453 -CCCCG-----------AGAAGAGTCAGTGGACAGCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 266356 37 - 81552678 -CCCCGCCTCCCCACCCAGAACAGTCAGTGGACGGCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 178896 26 + 80904711 -TCCTG-----------AGCACAGTCAGTGGATGGCCC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176308 26 + 74645514 -TCCTG-----------AGAACAGTCAGTGGACAGCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166861 26 + 75148670 -TCCTG-----------AGAACTGTCAGTGGACAGCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 982087 21 - 1291538 -----------------AAGACAGCCAGTGGGCAGCCC i calJac3.chrUn_GL286409 C 0 I 1013 s canFam3.chr9 15735477 27 - 61074082 CTGCTG-----------AGAACAGTCTGGGAACAGCCC i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e macFas5.chr16 183040 9361 + 80997621 M a score=16296.000000 s hg38.chr17_GL383563v3_alt 292934 6 + 375691 AGGTGC s panTro4.chr17 266388 6 + 82630442 AGGTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147202 6 + 73212453 AGGTGC i ponAbe2.chr17 C 0 I 24 s nomLeu3.chr19 266393 6 - 81552678 AGGTGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 178922 6 + 80904711 AGGTGC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176334 6 + 74645514 AGGTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166887 6 + 75148670 AGGTGC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15735504 6 - 61074082 AGGTGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e macFas5.chr16 183040 9361 + 80997621 M a score=10390.000000 s hg38.chr17_GL383563v3_alt 292940 8 + 375691 CGCGTGCC s panTro4.chr17 266394 8 + 82630442 CGCGTGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 266399 8 - 81552678 CGTGTGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 178928 8 + 80904711 TACGTGCC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176340 8 + 74645514 TACGTGCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166893 8 + 75148670 TACGTGCC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15735510 8 - 61074082 AGTGTGTC i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e macFas5.chr16 183040 9361 + 80997621 M e ponAbe2.chr17 147208 24 + 73212453 I a score=2476.000000 s hg38.chr17_GL383563v3_alt 292948 3 + 375691 GGG s panTro4.chr17 266402 3 + 82630442 GGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 266407 3 - 81552678 GGG i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 166901 3 + 75148670 GGG i chlSab2.chr16 C 0 I 71 s canFam3.chr9 15735518 3 - 61074082 AGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e ponAbe2.chr17 147208 24 + 73212453 I a score=504.000000 s hg38.chr17_GL383563v3_alt 292951 5 + 375691 ACGAC s panTro4.chr17 266405 5 + 82630442 ACGAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 266410 5 - 81552678 GGGAG i nomLeu3.chr19 C 0 C 0 s canFam3.chr9 15735521 5 - 61074082 GAGAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e ponAbe2.chr17 147208 24 + 73212453 I a score=1376.000000 s hg38.chr17_GL383563v3_alt 292956 12 + 375691 GAGCGCGGGCAG s panTro4.chr17 266410 12 + 82630442 AAGCGCGGGCAG i panTro4.chr17 C 0 T 5 s canFam3.chr9 15735526 12 - 61074082 GGGTTCAGGGAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C e ponAbe2.chr17 147208 24 + 73212453 I a score=360.000000 s hg38.chr17_GL383563v3_alt 292968 5 + 375691 CAGAG s canFam3.chr9 15735538 5 - 61074082 CAGGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C e ponAbe2.chr17 147208 24 + 73212453 I e panTro4.chr17 266422 5 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 292973 11 + 375691 ATGGCCCAGGT e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15735543 0 - 61074082 C e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C e ponAbe2.chr17 147208 24 + 73212453 I e panTro4.chr17 266422 5 + 82630442 T a score=2266.000000 s hg38.chr17_GL383563v3_alt 292984 26 + 375691 GGCAACAGAGATGGCCCAGGTGGCAA s panTro4.chr17 266417 26 + 82630442 GGCAGCAGAGACGGCCCAGGTGGCAA i panTro4.chr17 T 5 T 21 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15735543 0 - 61074082 C e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C e ponAbe2.chr17 147208 24 + 73212453 I a score=602.000000 s hg38.chr17_GL383563v3_alt 293010 132 + 375691 CAGAGACGGCCCAGGTGGCAACAGAGACGGCCCAGGTGGCAACAGAGACGGCCCAGGTTCCGTGTGCCGGGGTTGGGATTGCGGGCAACAGAGACGGGGCAGGTGCTGTGTGCCGGGGACAAGGCACATGGG s panTro4.chr17 266422 39 + 82630442 CAGAGACGGCCCAGGTGGCAACAGAGACGGCCCAGGT---------------------------------------------------------------------------------------------GG i panTro4.chr17 T 21 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15735543 0 - 61074082 C e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C e ponAbe2.chr17 147208 24 + 73212453 I a score=1719.000000 s hg38.chr17_GL383563v3_alt 293142 6 + 375691 CAACAG s panTro4.chr17 266461 6 + 82630442 CAACAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147232 6 + 73212453 CAACAG i ponAbe2.chr17 I 24 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15735543 0 - 61074082 C e calJac3.chrUn_GL286409 982108 1013 - 1291538 I e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=9235.000000 s hg38.chr17_GL383563v3_alt 293148 23 + 375691 AGACGGCCCAGGTGCCGTGTGCA s panTro4.chr17 266467 23 + 82630442 AGACGGCCCAGGTGCCGTGTGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147238 23 + 73212453 AGAAGGGGCAGGTGCCGTGTGCC i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 983121 23 - 1291538 AGGCAGTGCAGGTGCCGTGTGCT i calJac3.chrUn_GL286409 I 1013 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15735543 0 - 61074082 C e chlSab2.chr16 166904 71 + 75148670 I e papAnu2.chr16 176348 0 + 74645514 C e rheMac3.chr16 178936 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=11700.000000 s hg38.chr17_GL383563v3_alt 293171 13 + 375691 GGGGGCAAGGCAC s panTro4.chr17 266490 13 + 82630442 GGGGGCAAGGCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147261 13 + 73212453 GGGGGCAAGGCAC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 178936 13 + 80904711 GGGGGCGAGGAGT i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176348 13 + 74645514 GGGGGCGAGGAGT i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 983144 12 - 1291538 -GGGCTGAGGCAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15735543 0 - 61074082 C e chlSab2.chr16 166904 71 + 75148670 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=33530.000000 s hg38.chr17_GL383563v3_alt 293184 23 + 375691 GCGGGCAACAGAGACGGGGCAGA s panTro4.chr17 266503 23 + 82630442 GCGGGCAACAGAGACGGGGCAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147274 23 + 73212453 GCGGGCAACAGAGACGGGGCAGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 178949 23 + 80904711 GCGGGCAACAGAGATGGGGCAGA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176361 23 + 74645514 GTGGGCAACAGAGACGGGGCAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166975 23 + 75148670 GCGGGCAACAGAGACGGGGCAGA i chlSab2.chr16 I 71 C 0 s calJac3.chrUn_GL286409 983156 10 - 1291538 -------------GCGGGCCAGA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15735543 0 - 61074082 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=306233.000000 s hg38.chr17_GL383563v3_alt 293207 169 + 375691 CACAGGCTCCAAGCGCCAGCCCTG-CCATCCGCCAGCTCCTGGGCCTTGGCAAAGACGGCAGCACCACCTTAG---CCCGGGAGGCAGAAACACAGAATGTGACGCTC--ACGTACACAGAGAAGGCCAAGGTCACAGCACGAGAGGTGTCAAGGGAGGAGCATGAGAGATTATC s panTro4.chr17 266526 171 + 82630442 CACAGGCTCCAAGCGCCAGCCCTG-CCATCCGCCAGCTCCTGGGCCTTAGCAAAGACGGCAGCACTACCTTAG---CCCGGGAGGCAGAAACACAGAATGTGACCCTCTCACGTACACAGAGAAGGCCAAGGTCACAGCACGAGAGGTGTCAAGGGAGGAGCATGAGAGATTATC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147297 169 + 73212453 CACAGGCTCCAAGCGCCAGCCCTG-CCATCTGCCAGCTCCTGGGCCTTGGCAAAGAGGGCGGCACCACCTTAG---CCCGGGAGGCAGAAACACGGAATACGACCCTC--AAGCACACAGAGAAGGCCAAGGTCACAGCACATGAGGTGTCCAGGGAGCAGCAGGAGAGATTATC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 178972 168 + 80904711 CACAGGCTCCAAGCACCAGCCCTG-CCATCCGCCGGCTCCTGGGCCCTGGCAAAGACGGCAGCACCATCTTAG---CCCAGGAGGCAGAAACACGGAATATGACCCTC--AGGGACACACGGAAGGCCAAGGTCACGGCACGTGAGG-GTCAAGGGAGGAGCAGGAGAGATGACC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176384 168 + 74645514 CACAGGCTCCAGGCACCAGCCCTG-CCATCCGCCGGCTCCTGGGCCTTGGCAAAGACGGCAGCACCATCttag---cccaggaggcagaaacaCGGAATATGACCCTC--AGGGACACACAGAAGGCCAAGGTCACGGCACATGAGG-GTCAAGGGAGGAGCAGGAGAGATTAcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 166998 168 + 75148670 CAAAGGCTCCAGGCACCAGCCCTG-CCATCCGCCGGCTCCCGGGCCTTGGCAAAGACGGCAGCACCATCTCAG---CCCAGGAGGCAGAAACACGGACCATGACCCTC--AGGTACACACAGAAGGCCAAGGTCACGGCACATGAGG-GTCAAGGGAGGAGCAGGAGAGATTACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 983166 166 - 1291538 GAGGAGCTCCAAGCGCCGGCCCTG-CCATCTGCCCACTCCTCGGCCTTGGCAAAGACGGCAGCAA---CTTAG---CCGGGGAGGCTGAAGCCCAGAACATGACCCTC--ACACATACAGAGAAGGCCAACGTCATGGCACGTGAGGCATCAAGGGAGGAGCATGAAAGATGGTC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15735543 173 - 61074082 CAGAGGTTTCGAATGCTGGCTCTGACCACCTGCCAGCCACTGGGCCTCA-CAAAGATGGCAGTGCCACCTTAGCACCACAAGAGACAGGAGCATGGGGTGTGACCCACT-GGACAAACAGAGAAGGCCACTGCCACAGCACGTGGGGCTTTGAAGGAAGAGCATAGAAGGTCATC i canFam3.chr9 C 0 I 208 e mm10.chr11 75909129 48 + 122082543 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=211824.000000 s hg38.chr17_GL383563v3_alt 293376 143 + 375691 AAGAGAAGAAAAAG--GGAGCTCGGAGCTCCGTAAGGTAGTGAGACGGAGTTCACCAGGGGACAGGAAAGCCATGTAATTAGGGTGAAGACACAGC-GTTGATAT---------------GAACACTTTGAAAACTAGCAGGTTCGA--GGCGGGGGGG--AAGC s panTro4.chr17 266697 143 + 82630442 AAGGGAAGAAAAAG--GGAGCTCGGAGCTCCGTAAGGTAGTGAGAGGGAGTTCACCAGGGGACAGGAAAACCATGTA-TTAGGGTGAAGACACAGC-GTTGATAT---------------GAACACTTTGAAAACTAGCAG-TTCGA--GGCAGGGGGGGAAAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147466 145 + 73212453 AAGAGGAGAAAAAG--GGAGCTCCGTGCTCCGTAAGGTAGTGAGACGGAGTTCACCAGGGGACAGGAAAGCAATGTAATTAGGGTAAAGACACAGCTGTTGATAT---------------GAACACTTTGAAAACAAGCAGGTTCGA--GGCGGGGGGG-AAAGC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 179140 146 + 80904711 AAGAGAAGAAAAAG--GGAGCTCCCAGCTCCGTCAGGTGGTGACACGGAGTTTACCAGGGGACAGGAAAGGAATGTAATTAGGGTAAAGACACAGCTGTGGATAT---------------GAACACCCTGAAAACTGGCAGGTTCAA--GGCAGGAGGGGAAAGC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176552 146 + 74645514 aagagaaggaaaag--ggagcTCCCAGCTCCGTCAGGTGGTGAGACGGAGTTTACCAGGGGACAGGAAAGGAATGTAATCAGGGTCAAGACACAGCTGTTGATAT---------------GAACACCCTGAGAACTGGCAGGTTCAA--GGCAGGAGGGGAAAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 167166 146 + 75148670 AAGAGAAGAAAAAG--GGAGCTCCCAGCTCCGCCAGGTAGTGAGACGGAGTTTACCTGGGGACAGGAAAGGAAGGTAATTAGGGTAAAGTCACAGCTGTTGATAT---------------GAACACCCTGAAAACTGGCAGGTTCAA--GGCAGGAGGGGAAAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 983332 140 - 1291538 A---GGAGAAAAGG--TGAGCCCTGAG-GCCATGAGGGAGGAAGATAGAGCTTCCCAGGGGACAGGAAAGCAGTGTGATCAGGACAGACACACACCTGCCAATA-----------------GATGTTGTGAGAACTGGCAGGTTCAG--GGCAGGAGGGGAAAGC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15735924 158 - 61074082 aagaaaaAAAAAAGACAGAGATCTGAGGCATATAAGG----GAAATGGAACTTACTATGGAACAGGAAAGAATGGTAATTAGATTAAAAATGAACC-CTGAATATAAAAGGAGATGCACAGAGCAGTTTGAAAACTAGAGGGTTTGAAGGGCAGGAGGG--CAGC i canFam3.chr9 I 208 I 239 e mm10.chr11 75909129 48 + 122082543 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=310389.000000 s hg38.chr17_GL383563v3_alt 293519 240 + 375691 GAGTTACAGAAGAG---------------------GAGCCGTGGTGagggca----------------------ggtgagggcgggcaacggcgaggca--gggctgggACTGGGTCCGGAGGTTGAGCTGTCTCTGCTCCACTGGGCTGCGGGACTGACGCC-TCCTGAGGCTGCAAATGGGGCGGGGGAAGGACTCAAACTCCTTCTATTTTTCTGGACAGGGAGAGAGTGGCAGCAGCAGATCAAACCCCGGAGCCCCTGCCCT--GGGTGGGTGCCAGCTTCCC s panTro4.chr17 266840 240 + 82630442 GAGTTACAGAAGAG---------------------GAGCCGTGGTGAGGGCA----------------------GGTGAGGGCGGGCAACGGCGAGGCA--GGGCTGGGAGTGGGTCCGGAGGTTGAGCTGTCTCTGCTTCACTGGGCTGCGGGACTGACGCC-TCCTGAGGCTGCAACTGGGGCGGGGGAAGGACTCAAACTCCTTCTATTTTTCTGGACAGGGAGAGAGTGGCAGCAGCAGATCAAACCCCAAAGCCCCTGCCCT--GGGTGGGTGCCAGCTTCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147611 230 + 73212453 GTGTTTCATAAGAG---------------------GAGCCCTGGTGAGGAAA--------------------------------GGCAACGGCGAGGCA--GGGCTGGGAGTGGGTCCGGAGGTTGAGCTGTCTCTGCTCCACTGGGCTGCAGGACTGATGCC-TCCTGAGGCTGCACCTGGGGCGGGGGAAGGACTCAAACTCCTTCTATTTTTCTGGACAGGGAGAGAGTGGCGGCAGCAGATCAAACCCCAGAGCCCCTGCCCT--GGGTGGGTGCCAGCTTCCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 179286 228 + 80904711 GAGTTTCGCCAGAG---------------------GAGCTATGGTGAGGGCA--------------------------------GGCAACGGCGAGGCC--GGGCTGGGAGTGGGTCCGGAGGCTGAGCTG--TCCGCTCCACTGCGCTGCAGGGGTGGTGCC-TCCTGAGGCTGTAACTGGGGCGGGGGAAGGACTCAAACTCCTTCTATTTTTCTGGTCAGGGAGAGAGCGGCAGCAGCAGATCAAACCGCAGAGCCCCTGCCCT--GGGTGGGCACCAGCTTCCG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176698 228 + 74645514 GGGTTTCGCCAGAG---------------------GAGCTATGGTGAGGGCA--------------------------------GGCAACGGCgaggca--gggctgggagtgggTCCGGAGGCTGAGCTG--TCCGCTGCACTGGGCTGCAGGGGTGCTGCC-TCCTGAGGCTGTAACTGGGGCGGGGGAAGGACTCAAACTCCTTCTATTTTTCTGGGCAGGGAGAGAGCGGCAGCAGCAGATCAAACCGCAGAGCCCCTGCCCT--GGGTGGGCGCCAGCTTCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 167312 228 + 75148670 GAGTTTCGCCAGAT---------------------GGGCTATGGCGAGGGCA--------------------------------GGCAACGGCGAGGCA--GGGCTGCGAGTGGGTCCGGAGGCTGAGCTG--CCTGCTCCACTGGGCTGCAGGGGTGGTGCC-TCCTGAGGCTGTAACTGGGGCGGGGGAAGGACTCAAACTCCTTCTATTTTTCTGGGCAGGGAGAGAGCGGCAGCAGCAGATCAAACCGCAAAGCCCCTGCCCT--GGGTGGGCGCCAGCTTCCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 983472 270 - 1291538 AAGTTTCACAAGAGGCggcgtgtgagggcagtggtgaggcgtggtgagggccgtggtgaggcgtagtgaggtgtggtgagggcaggtaaCCTCGAGGCATGGGGCTGGGCAGGAGCTCGGAGGCTTAGCTGTCTCTGCT-CACTGCTCTCCAGGAGTGACCCCTTCCTGAGATCGTAACT---GCGGGG----------AACTGTCCTGTTTTTTCTGGAAACGGAGAGA-TGGC--CAGCAGATCAGTCC-CAAACCCCCTGGCCTGGGGGTGGGATCCAGCCTTCC i calJac3.chrUn_GL286409 C 0 I 767 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15736082 239 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=44039.000000 s hg38.chr17_GL383563v3_alt 293759 35 + 375691 TGAGACATTCCGTGCCTGTGACATtgctgtgtgca s panTro4.chr17 267080 35 + 82630442 TGAGACATTCCGTGCCTGTGACATTGCTGTGTGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147841 35 + 73212453 CGAGACATTCCGTGCCTGTGACATTACTGTGTGCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 179514 35 + 80904711 GGAGACACTCCGTGCCTGTGACATCGCCGTGtgca i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176926 35 + 74645514 GGACACACTCCGTGCCTGTGACATTGCTGTGTGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 167540 35 + 75148670 GGAGACACTCCGTGCCTGTGACATtgctgtgtgca i chlSab2.chr16 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15736082 239 - 61074082 I e calJac3.chrUn_GL286409 983742 767 - 1291538 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=225289.000000 s hg38.chr17_GL383563v3_alt 293794 161 + 375691 gagatgaacgagacgggaaaagccactgcaccctgaagaactacaatatggtgggggtggcagatgcc-aatcaatgacacagatacctatttaactaacaggtctaaggcgttttcattctacgcattaccaagtacccgctgggacgcctggcctcttag s panTro4.chr17 267115 161 + 82630442 GAGATGAACGAGCCGGGAAAAGCCACTGCACCCTGAAGAACTACAATACGGTGGGGGTGGCAGATGCC-AATCAATGACACAGATACCTATTTAACTAACAGGTCTAAGGCGTTTTCATTCTACGCATTATCAAGTACCCGCTGGGACGCCTGGCCTCTTAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 147876 162 + 73212453 GAGATGAACGAGACGGGAAAAGCCACTGCACCCTGAAGAACTACAATATGGTGGGGGAGGCAGATGCCAAATCAATGACACAGATACCTATTTAACTAACGGGTCTAAGGCGTTTTCATTCTACGCATTATCAAGTACCCGCTGGGACGCCTGGCCTCTTAG i ponAbe2.chr17 C 0 I 11 s rheMac3.chr16 179549 162 + 80904711 gagatgaatgagacgggaaacgccactgcaccctgaagaactgcagtacggtgggggaggcagatgccaaaccaatgactcagagacctatttaacgaacaggtgtgaggcgttttcattcaacgcattataaagcaccggctgggactcccggcctcttgg i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 176961 162 + 74645514 GAGATGAATGAGACGGGAAAAGCCTCTGCACCCTGAAGAACTGCAGTACGGTGGGGGAGGCAGATGCCAAACCAATGACTCAGACACCTATTTAACGAACAGGTGTGAGGCGTTTTCATTCAACGCATTATAAAGCACCGGCTGGGACGCCCGGCCTCTTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 167575 161 + 75148670 gagatgaatgagatgggaaaagcctctgcaccctgaagaactgcaatatggtgggggaggcagatgccaaaccaatgacacagagacctatttaacgaacaggtgtgaggcgttttcattcaacgcattataaagcaccggctgggacg-ccggcctcttgg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 984509 141 - 1291538 GGAATGAACAAGATGG--AAAGTCACTG-AACCTGAAAGAGTACACTATGGT-GGGGAGGCAGCTGTCAAGTCAATGA--CAAACACTCATTTAATGAACAGGTCTCAG--------------TGCATTAGCAGGTGCCCGCTGGGATGCCTGGCCTCCTG- i calJac3.chrUn_GL286409 I 767 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15736082 239 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=132.000000 s hg38.chr17_GL383563v3_alt 293955 6 + 375691 gtgccc s panTro4.chr17 267276 6 + 82630442 GTGCCA i panTro4.chr17 C 0 C 0 s rheMac3.chr16 179711 5 + 80904711 gcgca- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 177123 5 + 74645514 GCGCA- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 167736 5 + 75148670 gcgca- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 984650 5 - 1291538 GTACC- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15736082 239 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C e ponAbe2.chr17 148038 11 + 73212453 I a score=22773.000000 s hg38.chr17_GL383563v3_alt 293961 14 + 375691 gggacaggctgctt s panTro4.chr17 267282 14 + 82630442 GGGACAGGCTGCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 148049 14 + 73212453 GGGACAGGCTGCTT i ponAbe2.chr17 I 11 I 177 s rheMac3.chr16 179716 14 + 80904711 gggacgcgctgctt i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 177128 14 + 74645514 GGGACACGCTGCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 167741 14 + 75148670 gggacacgctgctt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 984655 14 - 1291538 GAGACAGGCCGCTC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15736082 239 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=128060.000000 s hg38.chr17_GL383563v3_alt 293975 94 + 375691 ggtgggacgtgcaggtggggtcaggaagtggataaataagagaattacccagcagggaggggAT--------------GAGGCTCTGGAAAGG------CTCGCTTTCTTTAGG s panTro4.chr17 267296 94 + 82630442 GGTGGGACGTGCAGGTGGCGTCAGGAAGTGGATAAATAAGAGAATTACCCAGCAGGGAGGGGAT--------------AAGGCTCTGGAAAGG------CTCGCTTTCTTTAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 148240 92 + 73212453 GGTGGGACGTGCAGGTGGCATCAGGAAGTGA--TAATAAGAGATTTACCCAGCAGGGAGGGCAT--------------GAGGCTCTGGAAAGG------CTCGCTTTCTTTAGG i ponAbe2.chr17 I 177 C 0 s rheMac3.chr16 179730 100 + 80904711 ggtgggacgtgtgggtggcggcaggaagtggacaaacaagagagttacccggcagggaggggat--------------gggGCTCTGGAAAGGCTGCTTCTTTCTTTCTTTAGG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 177142 98 + 74645514 GGTGGGACGTGCAGGTGGCGGCAGGAAGTGAACAAACAAGAGAGTT-CCCGGCAGGGAGGGGAT---------------GGGCTCTGGAAaggcttcttctttctttctttagg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 167755 114 + 75148670 ggtgggacgtgcaggtggcggcaggaagtggacaaacaagagagttacccggcagggaggggaggggaagggAGGGGAGGGGCTCTGGAAAGGCTGCTTCTTTCTTTCTTCAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 984669 93 - 1291538 GGTGGGATGTGCAGGCGACGTCAGGAAGCGGATACATGAGACAATGGCCCA-TAGGGAGGGGAT--------------GGGGCTCTTGCAAGG------CTTCCCTTCTTCAGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15736082 239 - 61074082 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=218822.000000 s hg38.chr17_GL383563v3_alt 294069 137 + 375691 GAAGTGTcagaaggcaggagtcctggaggcaggacctagggcagcaggctgagggaggcggACCCTTT---------------------------------------------------------------------------CCTGGGGGCCCCCTGACACAAGATGGGCCCCGGTGGTCTCATGTC-CTGCCTGGTCCCGGCTGTTGCAGC s panTro4.chr17 267390 137 + 82630442 GAAGTGTCAGAAGGCAAGAGTCCTGGAGGCTGGACCTAGGGCAGCAGGCTGAGGGAGGGGGACCCTTT---------------------------------------------------------------------------CCTGGGGGCTCCCTGACACAAGATGGGCCCCGGTGGTCTCATGTA-CTGCCTGGTCCCGGCTGTTGCAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 148332 137 + 73212453 GAAGTGTCAGAAGGCAAGAGTCCTGGAGGCAGGACCCAGGGCAGCAGGCTGAGGGAGGCAGACCCTTT---------------------------------------------------------------------------CCTGGGGGCTCCCTGACACAGGATGGGCCCTGGTGGTCTCATGTC-CTGCCTGGTCCCGGCTGTTGCAGC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 179830 203 + 80904711 GAAGTGTCAGAA-----GAGTCCTGGAGGCAGGACCTAGAGCAGC----TGAGGGAGGCGGACCCTCTCCTGGGGTCTCCCTGACATAAGACAGGCCCCCCGTGGTCTCATGACCTAGGGCAGCTGAGGGAGGCGGACCCTCTCCCGGGGTCTCCCTGACACAGGATGGGCCCCGGTGGTCTCATGTC-TTACCTGGTCCCGGCTGTTGCAGC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 177240 128 + 74645514 gAAGTGTCAGAA-----GAGTCCTGGAGGCAGGACCTAGGGCAGC----TGAGGGAGGCGGACCCTCT---------------------------------------------------------------------------CCCGGGGTCTCCCTGACACAGGATGGGCCCCGGTGGTCTCATGTC-TTGCCTGGTCCCGGCTGTTGCAGC i papAnu2.chr16 C 0 T 1 s chlSab2.chr16 167869 127 + 75148670 GAAGTGTCAGGA-----GAGTCCTGGAGGCAGGACCTAGGGCAGC-----GAGGGAGGCGCACCCTCT---------------------------------------------------------------------------CCTGGGGTCTCCCTGACACAGGATGGGCCCTGGTGGTCTCATGTC-TTGCGTGGTCCTGGCTGTTGCAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 984762 133 - 1291538 GACGCGTCAGAA-GCCGAAGTCCTGGAAGCAGGACCTAGGGCAGGCAGCTGAGGGAGGCGGAGACTTT---------------------------------------------------------------------------CCTGGGAA--CCCTGACACAAGACCGGCCCTGG-GGTCTCATGTC-CTGCCGGGTCCCGGCTATTGCAGC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15736321 136 - 61074082 GAAGTGACAGCATCCAAGGGTCCTCAATGCGGGACACAGGGCAGGAGGATGA-GGATGTGGATGCCTT---------------------------------------------------------------------------CCTGGCGGTTCCCTGTCATGAGCT-GACACTGGTGGTCTCATATCACTGCCTGATCCGAGCTACCGCAAC i canFam3.chr9 I 239 C 0 e mm10.chr11 75909129 48 + 122082543 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=256772.000000 s hg38.chr17_GL383563v3_alt 294206 493 + 375691 TAACGGTTC-TCTGTGGCCGACACAATAGGAGTTTGGAAAGCTAATACGCATATCCTTTCTCTGTCAGGGGGAGCTGGGGGCtgatgaatgtga-agatctagggtttggagtccactggacggtcttatcttctggtcccgtcccttcccagatgcgagacctcggatgaggctctcacccttggttttctgatctgtctctttaagggatgccatgagaatta-atgaggcagggtagataaggtgcttT-TACATAGCAAATTCCCAATTGCCT-GCAAATGGTCGTTAATGGTGATAACTGTAATTATCATGGGGAGGGCTGTCAGGCATGGCTTTACCA-------------TGTGtgagcttttgcaggatgaacaggtgctt-ccccatggaaggagggaggcgg-gttcaggcagaggagatcacacacg-aaaggc---aggg--ggcatgggtggtgtgtggtgtttcagggatccaTACTTCTACACTGCCGGTTTTTCCAATTTAAA s panTro4.chr17 267527 493 + 82630442 TAACGGTTC-TCTGTGGCTGACACCATAGGAGTTTGGAAAGCTAATACGCATATCCTTTCTCTGTCAGGGGGAGCTGGGGGCTGATAAACGTGa-agatctagggtttggagtccactggacggtcttatcttctggtcccatcccttcccagatgcaagacctcggatgagggtctcacccttggttttctgatctgtctctttaagggatgccatgagaatta-atgaggcagggtagataaggtgcttT-TACATAGCAAATTCCCAATTGCCT-GCAAATGGTTGTTAATGGTGATAACTGCAATTATCACGGGGAGGGCTGTCAGGCATGGCTTTACCA-------------TGTGtgagcttttgcaggatgaacaggtgctt-ccccgtggaaggagggaggcgg-gttcaggcggaggagatcacacacg-aaaggc---aggg--ggcatgggtggtgtgtggtgtttcagggatccaTACTTCTACACTGCCAGTTTTTCGAATTAAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 148469 493 + 73212453 TAATGGTTC-TCTGTGGCCAACACAAGAGGAGTTTGGAAAGCTAATAAGCATATCCTTTCTCTGTCAGGGGGAGCTGGGGGCtgatgaatgtga-agatgtagggtttggagtccactggacggtcttatcttctggtcccatcccttcccagatgcgagacctcggatgagggtctcacccttggttttctgatctgtctctttaaggggtgctgtgaggatta-atgaggcagggtagataaggtgcttt-tacatagcaaattcccaattgcct-acaaatgGTCGTTAATGGTGATAACTGTAATTATCATGGGGAGGGCTGTCAGGCATGGTTTAACCA-------------TGTGTGAGCTTTTACAGGATGAACAGGTGCTT-CCCCGTGGAAGTAGGGAGGCGG-ATTCAGGTGGAGGAGATCGCACAGG-AAAGGC---AGGG--GGCGTGGGTGGTGTGTGGTATTTCAGGGATCCATACTTCTACACTGCCTGTTTTTCCaatttaaa i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 984895 440 - 1291538 TATGGATTC-TCAGTGGCCCACACGGTAGGAGTTTGGAGAGTGAATAAGCATCTCCCTGCTCTGTAAGGAGGGGCTGGGGACTGATGACTGTGA-AGATGCAGGCTTTGGAGTCCG-----------------CTGCTCCCATCCCTGCCCAGATGGGACACCTAAGATGAGGTTCTCACCCTTGGTTTTCTGA----TCTCTTTAAGGGATGCCATGAGGATTACATGAGG-AGGGTAGACAAGGTGCTTT-CAC---TCAAATGCCCAATTGTCT-ACAAATGGCAGTTAATGGTGGTAACTACAATTATCATGGGTGGGGC-GTCAGGCATGGCTTCGCCA---------------------------AAGAGACAGCATGTGT------------GGGAAGGAGGCAG-GTTCAGGCAGAGGAGATCACACAC--AAAGGC---AGGGGTGTTGGGGGTAGGGTGCAGTGCCTTAGGG-TCCATACTTCTACACTGCCAGTTTTTCCAA---AAA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15736457 509 - 61074082 CAACAGTTCATGTACTGTCGACACTGTGTAAGTTAGGAGAGCTAAAGAACATGTCCTTTCTCTGTAaggaga----gcaggctgattaaggtgagaggctcaga--ctggagtctactggatggtcttatct-taggctctgtcccttcccagccgtgagaatgtgggc-agctgctcatcccagattacctgatctgtctctttaaaagaagccatgcagattaaatgaggcagggtatgcaaagtgctctgcatatagcaaatgcccaattgcttaatcagtggtggttAATGATGATTACTGTAATTCTCATGGGTAGAACCATCAGGAATGGCTAGACCAAAGAGGCAGTGCTCATGAAAGgttttgcaggatgaacaggaacttggccaatggaaagaaggagacggtgtgcaggcagagaaagccacatgtgcaaaggtgcaaaga--caTAATAGTCATGTGCTGCACCGAAGGTCTCCAGACTTCTAGACTGCTTATGTCTCCAATTTAAA i canFam3.chr9 C 0 I 190 e mm10.chr11 75909129 48 + 122082543 I e chlSab2.chr16 167996 0 + 75148670 C e papAnu2.chr16 177368 1 + 74645514 T e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=219396.000000 s hg38.chr17_GL383563v3_alt 294699 404 + 375691 AAAAAAAAAA---CTGCAATGCCCTAGACCAACGCTTTCCAAGCAGTGCTCACGGTGCTGGGGAAGGAAAATACCGGGGCAGCAGGGCAGGGCTGGAAG-----GGGGGCAAGGCCAG----TAGAGTGGGCAGCCTCTGCCTGGAC-TACCTGCCTTGCTCCTATGAACTGCACACATGCAG-GGGTTCAGGCCCCAAAAAGCAATATCCCCTCCACAACCCCTACCTACTGGTTTGTTCCATCTGAGCATTTCGGAGGCTCCAGGGGTCAGTGATGGGCCAGGACACACTTCGTGTGG---TTCCCGGGCCAGGGGAAGGGAGTTGGAAGCCAGGGCCCCCAGGTTCAGGGAATCACCACTCCCTCCACCCTCCAGCTAATGTAGAGAAAGGAAGGGTCCCAGGAACACACAGAAGGAG s panTro4.chr17 268020 405 + 82630442 AAAAAAAAAA--ACTGCAATGCCCTAGGCCAACGCTTTCCAAGCAGTGCTCACGGTGCTGGGGAAGGAAAATACCGGGGCAGCAGGGCAGGGCTGGAAG-----GGAGGCAAGGCCAG----TAGAGTGGGCAGCCTCTGCCTGGAC-CACCTGCCTTGCTCCTATGAACTGCACACATTCAG-GGGTTCAGGCCCCAAAAAGCAATATCCCCTCCACAACCCCTACCTACTGGTTTGTTCCATCTGAGCATTTCGGAGGCTCCAGGGGTCAGTGATGGGCGAGGACACACTTCGTGTGG---TTCCCGGGCCAGGGGAAGGGAGTTGGAAGCCAGGGCCCCCAGGTTCAGGGAATCACCACGCCCTCCGCCCTCCAGCTAATGTAGAGAGAGGAAGGGTCCCAGGAACACACAGAAGGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 148962 411 + 73212453 aaaaaaaaaaaaaCTGCAATGCCCTAGACCAACACTTTTCAAGCAGTGTTCACGGCGCTGGGGAAGGAAAATACCGGGGCAGCAGGGCAGGGCTGGAAG-----TGGGGCAAAGCCAGTCTCTGGAGTGGGCAGCCTCTGCCTGGAC-CACCTGCCTTGCTCCTATGAACTGGACACATTCAG-GGGTTCAGGCCCCAAAAAGCGATATCCCCTCCCCAACCCCTACCTACTGGGTTGTTCCATCTGAGCATTTCAGAGGCTCCAGGGGTCAGTGATGGGCCAGGACACACTTCGTGTGG---TTCCCGGGCCAGGGGAAGGGAGTTGGAAGTCAGGGCCCCCAGGTTCAGGGAATCACCACCCCCTCCGCCCTCCAGCTAATGGAGAGAAAGGAAGGGTCCCAGGAACACACAGAAGGAG i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 985335 387 - 1291538 AAAAAAAAAA----TACATTGCCCTAGACTGACACTATTGAAGCCGTCTTCAAGGGGCTGGGGAAGGCAAATGAT-GGGCAACAGGGCAGGGCTGGAAG-----GGAGGCAAGGCCTG----------------CCTCTGCCTGGAC-CACCTGCCTTGCTCCTATGAGCTGGACACATTCA--GGGTACAGGCCCCAAAAAGAAACATCCCCTCCCCCACCTC-ACCTATTGCTTTGCTCCATCTGAGCATCTCAGAAGCTCAAGGCATCAGTGGTGGGCCAGGACACA-GTCATGTGG---CCCCCAGGCCAGGGGAAAGGAGGTGGAAGCCAGGGCCCCCAAGTTCAGCGAATCCCCACTCCCTCCACCCTCCAACTAACAGACAGAAAGGAAGGGTCCCAGGAACACACAGAAGGCG i calJac3.chrUn_GL286409 C 0 I 1231 s canFam3.chr9 15737156 384 - 61074082 aaaAAAAAAG---CAGCACTGCCCTAGATGAATACTTTTGTAGCAGTCCTCATAGGGCTGGGGGATGCCAACAATGGGAAAG--GAGTGGGGCTGGGGGACAGAGGAGGGGAGGCCAGTCCTTGGAAAGGGCAG-----GAGAGCACACACCCACCTTTCCTCCATCTCCCGAGCAGACTCAATGGGTTTAGGCCCTGAAAAGGAACATGCTCCC----ATCCCAACCTGCATGTTTTCTCCACCTGAGCATTTGAGGGAC-CGGGCAGTTAGTGATTGGCCAGGATGCCCTCCATGTGTGACCCCCTGGGCCAGGGAAGGAGAACTGAGAAACAGGGTCCTCAAGCTCAGAGCTGCACCAC---------------------ATAGGGAAAAGGCAGA-CCAAGGAGCACAGAAATGGGA i canFam3.chr9 I 190 C 0 e mm10.chr11 75909129 48 + 122082543 I e chlSab2.chr16 167996 0 + 75148670 C e papAnu2.chr16 177368 1 + 74645514 T e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=46922.000000 s hg38.chr17_GL383563v3_alt 295103 125 + 375691 GGACAGAAGCATCAGCACCGCCACCACTGCCTGTCCTGATGGACACGGGTCCCA-CGAGCTTGTTCTGGGGCTGGTGATGGCACAGGACACTACAGATGTCTTCCATCGGACCCTCACAGTCACCC s panTro4.chr17 268425 125 + 82630442 GGACAGAAGCATCAGCACCGCCACCACTGCCTGTCCTGATGGACACGGGTCCCA-CGAGCTTGTTCTGGGGCTGGTGATGGCACAGGACACTACAGATGTCTTCCATCGGACCCTCACAGTCACCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 149373 125 + 73212453 GGACAGAAGCATCAGCACCGCCACCACTGCCTGTCCTGATGGACACGGGTCCCA-CGAGCTTGTTCTGGGGCCGGTAATGGCACAGGACACTACAGATGTCTTCCATCGGACTCTCACAGTCACCC i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 986953 118 - 1291538 GGGCATAGGCATCAGCTCCACC----CCACCTGTACTGAGGGGTGCAGGTCCCA-TGAGCTCATTCTAGCACT-GTGCTAGCACAGGTCAC--CAGATATCTTCCATTGAACCCTCACAGTCACTC i calJac3.chrUn_GL286409 I 1231 C 0 s canFam3.chr9 15737540 64 - 61074082 ------AGGCAT-GGCACCACC----CTG--TATCCTGG-GAGTACAGTTCTTACCCAGCTAGCTGTGGGCGTGGTGC------------------------------------------------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e chlSab2.chr16 167996 0 + 75148670 C e papAnu2.chr16 177368 1 + 74645514 T e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=476.000000 s hg38.chr17_GL383563v3_alt 295228 1 + 375691 C s panTro4.chr17 268550 1 + 82630442 T i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 149498 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 177367 1 + 74645514 C i papAnu2.chr16 T 1 C 0 s calJac3.chrUn_GL286409 987071 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 I 3 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15737604 0 - 61074082 C e chlSab2.chr16 167996 0 + 75148670 C e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=600.000000 s hg38.chr17_GL383563v3_alt 295229 1 + 375691 G s panTro4.chr17 268551 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 149499 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 177368 1 + 74645514 G i papAnu2.chr16 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15737604 0 - 61074082 C e calJac3.chrUn_GL286409 987072 3 - 1291538 I e chlSab2.chr16 167996 0 + 75148670 C e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=62710.000000 s hg38.chr17_GL383563v3_alt 295230 106 + 375691 AGGCAGGCCCGGACCCTCCATCACCCCGCGAGACAGTCC-AGACCCT--CAGTCACCTTGCGAGGCAGGCCTGGACCCTCAGTCACCCCCCAAGGCAGGCCCAGACCCT s panTro4.chr17 268552 106 + 82630442 AGGCAGGCCCGGACCCTCCATCACCCCGCGAGACAGTCC-AGACCCT--CAGTCACCTTGCAAGGCAGGCCTGGACCCTCAGTCACCCCCCAAGGCAGGCTCAGACCCT i panTro4.chr17 C 0 I 211 s ponAbe2.chr17 149500 106 + 73212453 AGGCAGGCCTGGACCCTCCATCACCCCGTGAGACAGTCC-AGACCCT--CAGTCACCTTGCAAGGCAGGCCTGGACCCTCAGTCACCCCCCAAGGCAGGCTCAGACCCT i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 177369 108 + 74645514 AGGTGGGCCCAGACCCTCCATCACCCCGAGAGGCAGGCCTGGACCCTCACAGTCACCCTGCAAGGCAGG-CTAGACCCTCAGCCACCCTGCGAGGCAGGCCCAGACCCT i papAnu2.chr16 C 0 I 3 s calJac3.chrUn_GL286409 987075 107 - 1291538 AGTCAGACCCAGTCCCTCAGTCACCCCACGAGGCAGGCCCGGACCCT--CAGTCAACTCATGAGGCAAGCCCAGATCCTCAGTCTCCCCACGAGGCAGGCCCAGACCCT i calJac3.chrUn_GL286409 I 3 C 0 s canFam3.chr9 15737604 27 - 61074082 ---------------------------------CAGTCC-AGGGCAT--GGGACACCT-----------------CCTTT----------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e chlSab2.chr16 167996 0 + 75148670 C e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=58.000000 s hg38.chr17_GL383563v3_alt 295336 2 + 375691 TA s ponAbe2.chr17 149606 2 + 73212453 CA i ponAbe2.chr17 C 0 C 0 s canFam3.chr9 15737631 2 - 61074082 TG i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 987182 0 - 1291538 C e chlSab2.chr16 167996 0 + 75148670 C e papAnu2.chr16 177477 3 + 74645514 I e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C e panTro4.chr17 268658 211 + 82630442 I a score=1000.000000 s hg38.chr17_GL383563v3_alt 295338 1 + 375691 C s panTro4.chr17 268869 1 + 82630442 C i panTro4.chr17 I 211 C 0 s ponAbe2.chr17 149608 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 987182 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15737633 1 - 61074082 C i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e chlSab2.chr16 167996 0 + 75148670 C e papAnu2.chr16 177477 3 + 74645514 I e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=3888.000000 s hg38.chr17_GL383563v3_alt 295339 11 + 375691 AGTCACCCGGT s panTro4.chr17 268870 11 + 82630442 AGTCACCCGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 149609 11 + 73212453 AGTCACCCGGC i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 177480 11 + 74645514 AGTTGCCCTGT i papAnu2.chr16 I 3 T 123 s calJac3.chrUn_GL286409 987183 11 - 1291538 AGTCACCCCAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15737634 1 - 61074082 A---------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e chlSab2.chr16 167996 0 + 75148670 C e rheMac3.chr16 180033 0 + 80904711 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=196093.000000 s hg38.chr17_GL383563v3_alt 295350 166 + 375691 GAGGTGGGCCCAGACCCTCAGTCACCCCGAGAGGCAGGCCTGGACCCTCACAGTCATCCCACAAGGCAGGCCTAGACCCTCAGTCACCCTGCAAGGCAGGCCCAGACCCTCAGAGTCGCCCTGTA----AGGCCCAGACCCTC--AGCCACACGGCGAGGCAGGCCCGGACC s panTro4.chr17 268881 166 + 82630442 GAGGTGGGCCCAGACCCTCAGTCACCCTGAGAGGCAGGCCTGGACCCTCACAGTCATCCCACGAGGCAGGCCTAGACCCTCAGTCACCCTGCAAGGCAGGCCCAGACCCTCAGAGTCGCCCTGTA----AGGCCCAGACCCTC--AGCCACGCGGCGAGGCAGGCCTGGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 149620 136 + 73212453 GAGGTGGGCCCAGACCCTTAGTCACCCCGAGAGGCAGGCCTGGACCCTCACAGTCATCCCATAAGGCAGGCCT------------------------------AGACCCTCAGAGTCGCCCTGTA----AGGCCCAGACCCTC--AGCCACCTGGCGAGGCAGGCCTGGACC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 180033 160 + 80904711 GAGGTGGGCCCAGACCCTCCATCACCCCAAGAGGCAGGCCTGGACCCTCACAGTCACCCTACAAGGCAGGCCTAGACCCTCAGTCACCCTTCGAGGCAGGCCCAGACCCTCAGAGTTGCCCTGTA----AGGCCCCGGCCCTC--AGCCACCCTGCGGGGCAGGCC------ i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 177368 159 + 74645514 GAGGTGGGCCCAGACCCTCCATCACCCCGAGAGGCAGGCCTGGACCCTCACAGTCACCCTGCAAGGCAGG-CTAGACCCTCAGCCACCCTGCGAGGCAGGCCCAGACCCTCAGAGTTGCCCTGTA----AGGCCCCAACCCTC--AGCCACCCTGCGAGGCAGGCC------ i papAnu2.chr16 T 123 C 0 s chlSab2.chr16 167996 158 + 75148670 GAGGTGGGCCCAGACCCTCCATCACCCCAAGAGGCAGGCCTGGACCCTCACAGTCACCCCACAAGGCAGGCCTGGACCCTCAGTCACCCTGCAAGGCAGGCCCAGACCCT--GAGTTGCCCTGTA----AGGCCCCGGCCCTC--AGCCACCCCGCGGGGCAGGCC------ i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 987194 168 - 1291538 AAGGCAGACCCAGACCCTTAGTCTCCCCACAAAGCCGATCCAGACC--CACAGTCACCCCATGAGTCCGACCTAGACCCACAGTTACCCCACAAGGTAGACCCAGATCCT--TAGTCACCCCACAAGGCAGGCCTGGATCCTCATAGTCACCCCACGAGGCAGGCCCCAACC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15737635 36 - 61074082 ---------CCAGACCCTC-------------------------------CTGTCATCCTATCAGGCAGGCCT---------------------------------CCC--------------------------------------------------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=120269.000000 s hg38.chr17_GL383563v3_alt 295516 125 + 375691 CTGAGGCACCCCG------------CCCCATTTCTCAGAGGAAACGAGGTGCGGAACGTAGCTAGCTAGC-------AGG--AATCTCGGGTTGG----CCTCCACCGCTGACTCAAGGCCTGAGCCCTGACCTGCCGAGTTCGTATCCA s panTro4.chr17 269047 125 + 82630442 CTGAGGCACCCCG------------CCCCATTTCTCAGAGGAAACGAGGTGCGGAACGTAGCTAGCTAGC-------AGG--AATCTGGGGTTGG----CCTCCACCGCTGACTCAAGGCCTGAGCCCTGACCTGCCGAGTTCGTATCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 149756 137 + 73212453 CTGAGGCACTCCGCGAGGCAGGCCTCCCCATTTCTCAGGGGAAATGAGCTGTGGAATGCAGCTAACTAGC-------AGG--AATCTGGGGTTGG----CCTCCACCACCGACTCAAGGCCTGAGCCCTGACCTGCCGAGTTCGTGTCCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 180193 115 + 80904711 -------------------------TCCCGTTTCTCAGAGGAGATGGGGGGTGGAAGGTAGCCGGCTAGC-------AGG--AATCTGGGGTTGGCC-GCCTCCACCGCTGACTCAAGGCCTGAACACTGACCTGCGGAGTTCACACCCA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 177527 115 + 74645514 -------------------------TCCCGTTTCTCAGAGGAGATGGGGGGTGGAAGGTAGCCGGCCAGC-------AGG--AATCGGGGGTTGGCC-GCCTCCACCGCTGACTCAAGGCCTGAACACTGACCTGCGGAGTTCACACCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 168154 114 + 75148670 -------------------------TCCCGTTTCTCGGAGGAGAT-GGGGGTGGAAGGTAGCCGACTAGC-------AGG--GATCTGGGGTTGGCC-ACCTCCACTGCTGACTCAAGGCCTGAGCCCCGACCTGCGGAGTTCACACGCA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15737671 110 - 61074082 CTTGGGCCT----------------CTCCTTTTCTCAGTGGGGTAAAGAGGCTGAGAGCAGTTACATGGCTCTGTGAAGGCAAGTCAGAGGTTGGCCAGCCTC-----CTGACCCAAG-------------------GAGTCCATGGCCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 987362 0 - 1291538 C e macFas5.chr16 183040 9361 + 80997621 M e nomLeu3.chr19 266415 0 - 81552678 C a score=292033.000000 s hg38.chr17_GL383563v3_alt 295641 163 + 375691 GCAGCTGCTGACAGCCCTGCTTGGGAGCATTTCAGTCTCCCCCAGGGccgcctccgcacccacgttcctgcctccacctgctccgcctccgGGCCCCAGTCATCCACGTCCTCTCAT-------------CTCACCCGCTG--CC------AGGCCAGGCCCTGATGCCCGCCTGCGGCCATAG s panTro4.chr17 269172 163 + 82630442 GCAGCTGCGAACAGCCCTGCTTGGGAGCATTTCGGTCTCCCCCAGGGCCGCCTCTGCACCCACGTTCCTGCCTCCATCTGCTCCGCCTCCAGGCCCCAACCATCCACGTCCTCTCAT-------------CTCACCTGCTG--CC------AGGCCAGGCCCTGACGCCCTCCTACGGCCATAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 149893 165 + 73212453 GCAGCTGCTGACAGCCCTGCTTGGGAGCATTTCAGTCTCCCCCAGGGCTGCCTCCGCACCCACGTTCCTGCCTCCATCTCCTCTGCCTCCAGGCCCCAGCCATCCACGTCCTCTCAT-------------CTGACCTGCTGCTCC------GGGCCAGGTCCTGACGCCCGCCTACGGCCATAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 180308 160 + 80904711 GCAGCTGCTGACAGTCCTGCCTGGCAGCATTTCGGGCTCCCCCAGGGCCTCCTCTGCGCCCAGGTTCCTACCTCCATCCGCTCCACCTCCTGGCCCCAGCCATCCGCGTCCTCTCAT-------------CTGACCTGCTG--CT---------CCAGGCCCTGACTCCCGCCTACGGCCACAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 192407 160 + 80997621 GCAGCCGCTGACAGTCCTGCCTGGCAGCATTTCGGGCTCCCCCAGGGCCTCCTCTGCGCCTAGGTTCCTACCTCCATCCGCTCCACCTCCTGGCCCCAGCCATCCGCGTCCTCTCAT-------------CCGACCTGCTG--CT---------CCAGGCCCTGACTCCCGCCTACGGCCACAG i macFas5.chr16 M 9361 C 0 s papAnu2.chr16 177642 160 + 74645514 GCAGCTGCTGACAGTCCTGCCTGGGAGCATTTCGGGCTCCCCCAGGGCCTCCTCTGCGCCCAGGTTCCTACCTCCATCCGCTCCGCCTCCTGGCCCCAGCCATCCACGTCCTCTCAT-------------CTGACCTGCTG--CT---------CCAGGCCCTGACTCCCGCCTACGGCCACAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 168268 160 + 75148670 GCAGCTGCTGACAGTCCTGCCTGGGAGCGTTTCGGGCTCCCCCAGGGCCTCCTCTGCGCCCCGGTTCCTGCCTCCATCCGCTCCGCCTCCTGGCCCCAGCCATCCACGTCCTCTCAT-------------CTGACCTGCTG--CT---------CCGGGCCCTGACTCCCGCCTACGGCCACAG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15737781 168 - 61074082 GTGGCTGCTGCCAGACC------------CTCCAGGCTTCCCTGGGGCATCCTCTCAGCCTCCTTTTCTGCCTCCATCTGGTCACCAACCAAGCCCTGACAATC--TGTCCTCTCATTCAACCTCTTCCCCTGGCCCACTG--CTCCTGTCCAGTCAGACTGCAATTCCCACATCTGGCCTTGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 987362 0 - 1291538 C e nomLeu3.chr19 266415 0 - 81552678 C a score=128373.000000 s hg38.chr17_GL383563v3_alt 295804 65 + 375691 -CTCCACTGAGCATGCTGCCCA-CCCCC--TTGCAATGTCCCCTCCATGCAGCTGACGGA------GGCCGACTT s panTro4.chr17 269335 65 + 82630442 -CTCCACTGAGCATGCTGCCCA-CCCCC--TTGCAATGTCCCCTCCATGCAGCCGACGGA------GGCCGACTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150058 65 + 73212453 -CTCCACTGAGCATGCTGCCCA-CCCCC--TCGCAATGTCCCCTCCACACAGCCGATGGA------GGCCGACTT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 180468 72 + 80904711 -CTCCACTGAGCATGCTGCCCACCCCCC--TCGCAATGCCCCTTCCACACGGCCGGAGGAGGAGGCGGCCAACCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 192567 72 + 80997621 -CTCCACTGAGCATGCTGCCCACCCCCC--TCGCAATGCCCCTTCCACACGGCCGGAGGAGGAGGCGGCCAACCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 177802 72 + 74645514 -CTCCACTGAGCGTGCTGCCCACCCCCC--TCGCAATGCCCCGTCCACACGGCCGTAGGAGGAGGCGGCCAACCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 168428 72 + 75148670 -CTCCACTGAGCGTGCTGCCCACCCCCC--TCGCAATGCCCCTTCCACACGGCCGGAGGAGAAGGAGGCCAACTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 987362 67 - 1291538 -CTCCACTGAGCACGATGCCCCCACCCCAGCTGCAACGCCCCCTTCACACAGCCCAAGGA------GGTGACCT- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15737949 60 - 61074082 TTGCCTCTGAGCATCCTGT----TCCCC--T---AAAGGCCCCACCATATTGCCAAAGGT------GGCCAACTC i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e nomLeu3.chr19 266415 0 - 81552678 C a score=160705.000000 s hg38.chr17_GL383563v3_alt 295869 54 + 375691 GAGGGCACCTGACATCGATG-GGCTGCAACCTCC-AGGAAGAA---------CCTGCACGTCTGG s panTro4.chr17 269400 54 + 82630442 GAGGGCACCTGACATCGATG-GGCTGCAACCTCC-AGGAAGAA---------CCTGCACATCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150123 54 + 73212453 GAGGGCACATGACATCGATG-GGCTGCAACCTCC-AGGAAGAA---------CCTGCACGTCTGG i ponAbe2.chr17 C 0 I 82 s nomLeu3.chr19 266415 54 - 81552678 GAGGGCACCTGACATCGATG-GGCTGCAACCTCC-AGGAAGAA---------CCTGCACGTCTGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 180540 54 + 80904711 GAGGGCACCTGACATCGATG-GGCAGCAACCTCC-AGGAAGAA---------CCTGCACGTCTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 192639 54 + 80997621 GAGGGCACCTGACATCGATG-GGCAGCAACCTCC-AGGAAGAA---------CCTGCACGTCTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 177874 54 + 74645514 GAGGGCACCTGACATCGATG-GGCAGCAACCTCC-AGGAAGAA---------CCCGCACGTCTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 168500 54 + 75148670 GAGGGCACCTGACATCGATG-GGCAGCAACCTCC-AGGAAGAA---------CCCACACGTCTGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 987429 63 - 1291538 GAGGCCGCCTGACATTGATG-AGCTGCAGCCTCC-AAGAAGAACTTGCAGTCCCTACACACCCAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15738009 50 - 61074082 CTGGCCAGCAAATGTAGCTGTGGTTGTAAGCTCCAAGGAAGAA---------TCTTCAG------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I a score=19252.000000 s hg38.chr17_GL383563v3_alt 295923 8 + 375691 GAGCCCCA s panTro4.chr17 269454 8 + 82630442 GAGCCCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 266469 8 - 81552678 GAGCCCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 180594 8 + 80904711 GAGCCCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 192693 8 + 80997621 GAGCCCCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 177928 8 + 74645514 GAGCCCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 168554 8 + 75148670 GAGCCCCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 987492 8 - 1291538 AAGCCCCA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15738059 8 - 61074082 TGGCACCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e ponAbe2.chr17 150177 82 + 73212453 I a score=235312.000000 s hg38.chr17_GL383563v3_alt 295931 102 + 375691 CCTGTCCTTC-----------CCCTGCAC-GTTCCCCGCACGGCGCCCTCGTCTCTCAGCTCA------------CCAGTGGC---------------TCCCTTGTGTTCTAGGCTTCGTGCAGTCCCCAGGCCTTTGCTC s panTro4.chr17 269462 102 + 82630442 CCTGTCCTTC-----------CCCTGCAC-GTTCCCCGCACAGTGccctcgtctctcagctca------------ccagtggc---------------tcccttgtgttctaggcttcatgcagtccccaggcctttgctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150259 102 + 73212453 CCTGTCCTTC-----------CCCCGCAC-GTTCCCCGCACGGCGCCCTCGTCTCTCAGCTCA------------CCAGTGAC---------------TCCCTTGTGTTCTAGGCTTCGTGCAGTCCCCAGACCTTTGCTC i ponAbe2.chr17 I 82 C 0 s nomLeu3.chr19 266477 113 - 81552678 CCTGTCCTTCccccgcacgtgccccgcac-gttccccgcacgGCGCCCTCGTCTCTCAGCTCA------------CCAGCGGC---------------TCCCTTGTGTTCTAGGCTTCGTGCAGTCCCCAGGCCTTGGCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 180602 111 + 80904711 CCTGTCGTTC-----------C-CCGAAC-GTTCCCCGCACAGCGCCCTCGTCTCTCGGCTCACCTGGCCT--CTCCAGTTGC---------------TCCCTCGTGTTCTAGGCTGCGTGCAGTCCCCAGGCCTTTGCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 192701 111 + 80997621 CCTGTCGTTC-----------C-CCGCAC-GTTCCCCGCACAGCGCCCTCGTCTCTCGGCTCACCTGGCCT--CTCCAGTTGC---------------TCCCTCGTGTTCTAGGCTGCGTGCAGTCCCCAGGCCTTTGCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 177936 102 + 74645514 CCTGTCATTT-----------C-----------CCCCGCACGGCGCCCTCGTCTCTCGGCTCACCTGGCCT--CTCCAGTTTC---------------TCCCTCGTGTTTTAGGCTGCCTGCAGTCCCCAGGCCTTTGCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 168562 111 + 75148670 CCTGTCGTTC-----------CCCCGCAT-GTTCCCCGCACGGCGCCCTCGTCTCTCGGCTCACCTGGCCT--CTCCAGTTGC---------------TCCCTCATGTTCTAGGCTGTGTGCAGT-CCCAGGCCTTTGCTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 987500 89 - 1291538 CCTGCCATTC-----------CCCGACAC-ATTCCCCATATGGAGCCCTCATCtccc----------------------tgac---------------tacctctctatcttgctttcatactgtccac---cctttactc i calJac3.chrUn_GL286409 C 0 I 156 s canFam3.chr9 15738067 123 - 61074082 GGTGCCCCCC-----------ATCTGTACGGCCCCCCATACAGTGCcctcatctctcagctgccctggcctcacacaggttgccaaagctgcccctagttccttgtgttctgggttgca-------gccaagcctttgctt i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I a score=200986.000000 s hg38.chr17_GL383563v3_alt 296033 70 + 375691 ATGCTGCACCCTTCACCTGGGGCCCCTGTCTCTCTCCCTAAACCTTCTGTCCACCTCTC-ACTCCTATtct s panTro4.chr17 269564 70 + 82630442 atgctgcacccttcacctggagcacctgtctctctccctaaacgctctgtccacctctt-actcCTATtct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150361 70 + 73212453 ATGCTGCACCCTTCACCTGGGGCCCCTGTCTCTCTCCCTAAACCCTCTGTCCACCTCTC-ACTCCTATTCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 266590 70 - 81552678 ATGCTGCACCCTTCACCTGGGGCACCTGTCTCTCTCCCTAAATCCTCTGTCCACCTCTC-ACTCCTATTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 180713 70 + 80904711 ATGCTGCCCCCTTCACCGGGGGCACCTGTCTCTCTCCCTAAACCCTCTGTCCACCTCTC-ACTCCTATTCT i rheMac3.chr16 C 0 I 238 s macFas5.chr16 192812 70 + 80997621 ATGCTGCCCCCTTCACCTGGGGCACCTGTCTCTCTCCCTAAACCCTCTGTCCACCTCTC-ACTCctattct i macFas5.chr16 C 0 I 24 s papAnu2.chr16 178038 70 + 74645514 ATGCTGCACCCTTCACCTGGGGCACCtgtctctctccctaaaccctctgtccacctctc-actcctattct i papAnu2.chr16 C 0 I 4 s chlSab2.chr16 168673 70 + 75148670 ATGCTGCACCCTTCACCTGGGGCACCTGTCTCTCTCCCTAAACCCTCTGTCCACCTCTC-ACTCctattct i chlSab2.chr16 C 0 I 237 s canFam3.chr9 15738190 70 - 61074082 atgctgcaccctccatctgcagtgcctgcccacctccc-aaacctcctgtccactaggctactcctgttct i canFam3.chr9 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I a score=111540.000000 s hg38.chr17_GL383563v3_alt 296103 182 + 375691 ttctttct---------------------------------------------------------------------atctttct-------------------atctagctagctag----cta---gctatctatctatct-atctatctatctatctat--------------gtctattttgagacagagtctcggtctgtcgcccaggctggagtgcaatggcacaatctcagctcactgcaacatccgcctcccaggtgcaagcgattctc---ctgcctcagcctcct s panTro4.chr17 269634 162 + 82630442 ttct-------------------------------------------------------------------------atctgtct-------------------atcta-----------------------tctatctatct-atccatccatccatctat--------------ATCTAttttgagacagagtctcggtctgtagcccaggctggagtgcaatggcacaatctcagctcactgcaacatccgcctcccaggtgcaagcgattctc---ctgcctcagcctccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150431 134 + 73212453 TTCT------------------------------------------------------------------------------------------------------------------------------------------------ATCTATCTATCTAT--------------GTCTAttttgagacagaatctcagtctgtcgcccagactggaatgcagtggcacgatctcagctcaatgcaacatccgcctcccaggtacaagcgattctc---ctgcctcggcctccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 266660 249 - 81552678 TTCTTtctatctatctatctctctctctctatctctctatccatctatctatctatctctctatctatctatc---catctatct-------------------atctatctatctaa---tcta---tccatctatctatct-atcaatctatctatctat--------------atctattttgagacagagtctcggtctgtcacccaggctggagtgcaatggcatgatctcagctcactgtaacatccgcctcccaggtacaagcgattctc---ctgcctcagctcccc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 192906 253 + 80997621 ----------------------------------atctatctatctgtttatctatccatctgtctatctatctatcatctgtctctctatctctccatctatcatctatccatctat-catcta---tctatctatctgtct-atctatctatccatccatccatccatccatccatctatcttgagacggagcttcagtctgtcgtccaggctggagtgcaatggcacaatctcagctcacagcaacctccaccttccgggtacaagcgattcgc---ctgcctcagcctccc i macFas5.chr16 I 24 C 0 s papAnu2.chr16 178112 241 + 74645514 ----------------------------------gtctatctatctgtctatctat-catctatctatctgtctgtcatctatct------------gtctatcgtctatctacttctccatcca---tctgtctatctatcc-atccatccatccatccatccatccatccatccatccatcttgaGACAGAActtcagtctgtcgcccaggctggagtgcaacggcacaatctcagctcacagcaacctccaccttccgggtacaagcgattcgc---ctgcctcagcctccc i papAnu2.chr16 I 4 C 0 s canFam3.chr9 15738260 157 - 61074082 -----------------------------------------------------------------------------------------------------------tttttaagactTCTTTTAGgggatgcctgggtggctcagtcagttacacgtccaa------------------ctcttgggtttgg--ctcaggtcatgatcttgaatggaggcccctgtcaggctttgtgctcagtgtggtatctactt-----------gagattctctctctccctctccctctt i canFam3.chr9 C 0 I 307 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I e chlSab2.chr16 168743 237 + 75148670 I e rheMac3.chr16 180783 238 + 80904711 I a score=30333.000000 s hg38.chr17_GL383563v3_alt 296285 29 + 375691 gagcagctgggatcacaggaatgtgccac s panTro4.chr17 269796 29 + 82630442 gagcagctgggatcacaggcatgtgccac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150565 29 + 73212453 gagcagctgggattacaggtgcccgccac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 266909 29 - 81552678 gagcagctgggatcataggcatgtgccac i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 193159 29 + 80997621 aagtagctgggattaccggcatgcaccac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 178353 29 + 74645514 aagtagctgggattaccggcatgcaccac i papAnu2.chr16 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15738417 307 - 61074082 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I e chlSab2.chr16 168743 237 + 75148670 I e rheMac3.chr16 180783 238 + 80904711 I a score=45164.000000 s hg38.chr17_GL383563v3_alt 296314 88 + 375691 tacacccggctaattttttgtatttttagtagagacagggtttcactatgttggccaggctggtctcaaatgcctgacct-atgatcca s panTro4.chr17 269825 88 + 82630442 tacgcccagctaattttttgtatttttagtagagatggggtttcactatgttggccaagctggtctcaaatgcctgacct-atgatcca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150594 89 + 73212453 cacacccagctaattttttgtatttttagtagagacagggtttcactatgttggccaggctggtctcaaatgcctgacctcatgatcca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 266938 89 - 81552678 tacgcctggctaattttttatatttttagtagagacagggtttcactatgttggccaggctggtctcaaatgcctgacctcatgatcca i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15738417 307 - 61074082 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I e chlSab2.chr16 168743 237 + 75148670 I e papAnu2.chr16 178382 0 + 74645514 C e rheMac3.chr16 180783 238 + 80904711 I e macFas5.chr16 193188 0 + 80997621 C a score=31230.000000 s hg38.chr17_GL383563v3_alt 296402 45 + 375691 cctgcctcagcctcccaaagtgctgggattacaggtgtgtgccaa s panTro4.chr17 269913 45 + 82630442 cctgcctcagcctcccaaagtgctgggattacaggtgtgtgccaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 267027 45 - 81552678 cccgcctcagcctcccaaagtactcggattacaggtgtgcaccac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 181021 45 + 80904711 cctgcctcagcctcccaagtagctgggattaccggcatgcaccac i rheMac3.chr16 I 238 C 0 s chlSab2.chr16 168980 45 + 75148670 cctgcctcagcctcccaagtagctgggattaccggcacccaccac i chlSab2.chr16 I 237 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15738417 307 - 61074082 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I e papAnu2.chr16 178382 0 + 74645514 C e macFas5.chr16 193188 0 + 80997621 C e ponAbe2.chr17 150683 0 + 73212453 C a score=151759.000000 s hg38.chr17_GL383563v3_alt 296447 92 + 375691 cacgaccggctaatttttgtatttttaggagagacagggtttcaccgcgttggtcaggctggtcttgagaactcctggcctcaggtgatccg s panTro4.chr17 269958 92 + 82630442 cacgaccggctaatttttgtatttttaggagagacagggtttcaccgcgttggtcaggctggtcttgagaactcctggcctcaggtgatccg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 267072 90 - 81552678 cacgcccggctaatttttgtatttttaggagagatggggtttcaccgtgttgtccaggctggtc--acgaactcctggcctcaggtgatctg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 181066 90 + 80904711 catgcccggctaatttttatatttttaggagaga--ggatttcaccatgttggtcaggctggtcttgagaactcctggcttcaggtgatcca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 193188 90 + 80997621 catgcccggctaatttttatatttttaggagaga--ggatttcaccatgttggtcaggctggtcttgagaactcctggcttcaggtgatcca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 178382 90 + 74645514 catgcctggctaatttttatatttttaggagaga--ggatttcaccatgttggtcaggctggtcttgagaactcctggcttcaggtgatcca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 169025 90 + 75148670 cacgcctggctaatttttgtatttttaggagaga--ggatttcaccatgttggtcaggctggtctcgagaactcctggcttcaggtgatcca i chlSab2.chr16 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15738417 307 - 61074082 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I e ponAbe2.chr17 150683 0 + 73212453 C a score=243359.000000 s hg38.chr17_GL383563v3_alt 296539 109 + 375691 cccgcctcagcctcccaaagtgctgggattacaggcgtgagcc--------------------------------------------accgcgaccggccTATTCTTTTTAAAGAC-----TTCTTTACACATGACCTTCACCTGGAGGCTTTTCCTT s panTro4.chr17 270050 152 + 82630442 cccgcctccgcctcccaaagtgctgggattacaggcgtgagccgccgcgcccggcctcccgaggtgctgagattacaggcgtgagccaccgcgaccggcctattctttt-aAAGAC-----TTCTTTACACGTGACCTTCACCTGGAGGCTTTTCCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150683 109 + 73212453 cccacctcagcctcccaaagtgctgggattacaggcgtgagcc--------------------------------------------accgcgaccagccTATTCTTTTTAAAGAC-----TTCTTTAAACATGACCTTCACCTGGAGGCTTTTCCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 267162 109 - 81552678 cccgcctcggcctcccaaagtgctgggattacaggcgtgagcc--------------------------------------------actgcacccggccTATTCTTTTTAAAGGC-----TTCTTTACACATGACCTTCACCTGGAGGCTTTTCCTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 181156 109 + 80904711 cccacctcagcctcccacagtcctgggattacaggcgtgagcc--------------------------------------------accgtgcccagccTATTCTTTCTAAAGAC-----TTCTTTACACATGACCTTCACCTGGAGGCTTTTCCTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 193278 109 + 80997621 cccacctcagcctcccacagtcctgggattacaggcgtgagcc--------------------------------------------accgtgcccagcctattctttctaAAGAC-----TTCTTTACACATGACCTTCACCTGGAGGCTTTTCCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 178472 109 + 74645514 cccacctcagcctcccaaagtcctgggattacaggcgtgagcc--------------------------------------------accatgcccagcctattctttCTAAAGAC-----TTCTTTACACATGACCTTCACCTGGAGGCTTTTCCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 169115 114 + 75148670 cccgcctcagcctcccgaagtcctgggattacaggtgtgagcc--------------------------------------------accgtgcccagACTATTCTTTTTAAAGACTTCTTTTCTTTACACACGACCTTCACCTGGAGGCTTTTCCTT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75909129 48 + 122082543 I e canFam3.chr9 15738417 307 - 61074082 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I a score=67497.000000 s hg38.chr17_GL383563v3_alt 296648 37 + 375691 GATCCCCTCCAAAACAGGTAAAGAATCTACTCTCAGA s panTro4.chr17 270202 32 + 82630442 GATCC-----AAAACAGGTAAAGAATCTACTCTCAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150792 37 + 73212453 GATCCCCTCCAAATCAGGTAAAGAATCTACTCTCAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 267271 37 - 81552678 GATCCCCTCCAAAACAGGTAAAGAATCCACTCTCAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 181265 30 + 80904711 GA-----TCCAAAACAGGTAAAGAATCCA--CTCAGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 193387 30 + 80997621 GA-----TCCAAAACAGGTAAAGAATCCA--CTCAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 178581 32 + 74645514 GA-----TCCAAAACAGGCAAAGAATCTACTCTCAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 169229 37 + 75148670 GATCCCCTCCAAATCAGGTAAAAAATCCACTCTCAGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15738724 35 - 61074082 GATCACCTTCAAGATGGGT--TGAGTTCATTCTCAGA i canFam3.chr9 I 307 C 0 e mm10.chr11 75909129 48 + 122082543 I e calJac3.chrUn_GL286409 987589 156 - 1291538 I a score=336346.000000 s hg38.chr17_GL383563v3_alt 296685 114 + 375691 GTTCCTGGAAGGCCTGGGTATACGTCCTTCATTGGGCTGACACATTATTACGAGACAACATGAAACCCTCCATCTC-CCC-TCCGGAACATGAGTCTCTGGAGGACCAGGCCCTGC- s panTro4.chr17 270234 114 + 82630442 GTTCCTGGAAGGCCTGGGTATACGTCCTTCATTGGGCTGACACATTATTGCGAGACAACATGAAACCCTCCATCTC-CCC-TCCGGAACGTGAGTCTCTGGAGGACCAGGCCCTGC- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 150829 114 + 73212453 GTTCCTGGAAGGCCTGGGTATATGTCCTTCATTGGGCTGATACGTTATTACGAGACAACGTGAAACCGTCCATCTC-CCC-TCCGGAACGTGAGTCTCTGGAGGACCAGGCCCTGC- i ponAbe2.chr17 C 0 I 155 s nomLeu3.chr19 267308 114 - 81552678 GTTCCTGGAAGGCCTGGGTGTACGACCTTCACTGGGCTGATACATTATTACGAGACAACATGAAACCCTCCATCTC-CCC-TCCGGAACGTGAGTCTCTGGAGGACCAGGCCCTGC- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 181295 114 + 80904711 GTTCCTGGAAGGCCTGGGTGCATGTCCTTCACTGGGCTGATACATTATTAGGAGACAACATGAAACCCCCCATCTC-CCC-TCCAGAACGTGAGTCTCTGGAGGACCAGGCCCTGC- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 193417 114 + 80997621 GTTCCTGGAAGGCCTGGGTGCATGTCCTTCATTGGGCTGATACATTATTAGGAGACAACATGAAACCCCCCATCTC-CCC-TCCAGAACGTGAGTCTCTGGAGGACCAGGCCCTGC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 178613 114 + 74645514 GTTCCTGGAAGGCCTGGGTGCACGTCCTTCATTGGGCTGATACATTATTAGGAGATAACATGAAACCCCCCATCTC-CCC-TCCAGAACGTGAGTCTCTGGAGGACCAGgccctgc- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 169266 114 + 75148670 GTTCCTGGAAGGCCTGGGTGTATGTCCTTCACTGGGCTGATACATTATTAGGAGACAACATGAAACCCTCCATCTC-CCC-TCCAGAACGTGAGTCTCTGGAGGACCAGGCCCTGC- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75909177 111 + 122082543 GTTTCTAGATGGTTTGTGTATGTATCCATCACTGAGTGT---CATTGCTAGAGGGCAATGTGGGACCCACAGTTTT-CCTGTCTAGAAGGAATGTCAC-GGAGAGCCaggccctac- i mm10.chr11 I 48 C 0 s canFam3.chr9 15738759 111 - 61074082 GCTCCCAGAAGGCCCAAGCATGGGTCCATCATGGGGATTAAACATTATTTCAAGGCCAGGTGGAATCCTCTGTCTCTTCC-TCTAGAATGTG----TCTGGAGGACCA-GTCCTAca i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 987589 156 - 1291538 I a score=246468.000000 s hg38.chr17_GL383563v3_alt 296799 85 + 375691 --CCctggcccctgcctacctctccatcttccttccacactgtccacccttcacattttgcactcacaacacactgacctccggcca s panTro4.chr17 270348 85 + 82630442 --CCctggcccctgcctacctctccatcttccttccacactgtccacccttcacattttgcactcacaacacactgacctccggcca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 151098 85 + 73212453 --CCctggcccctgcctacctctccatcttccttccacactgtccacccttcacactttgcactcacaacacactgacctccggcca i ponAbe2.chr17 I 155 C 0 s nomLeu3.chr19 267422 84 - 81552678 ---Cctggcccttgcctacctcgccatcttccttccacactgtccacccttcacactttccactcacaacgcactgacctccagcca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 181409 85 + 80904711 --CCctggcccctgcctatctctccgtcttccctccacactgtccagccttcacactgtgcactcgcaacacactgacctctggcca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 193531 85 + 80997621 --CCctggcccctgcctatctctccgtcttccctccacactgtccagccttcacactgtgcactcgcaacacactgacctctggcca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 178727 85 + 74645514 --ccctggcccctgcctATCTCTCCGTCTTCCTTCCACACTGTCCAGCCTTCACACTGTGCACTCGCAACACACTGACCTCCGGCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 169380 85 + 75148670 --CCctggcccctgcctatctctccatcttccttccacactgtccacccttcacactgtgcactcgcaacacactgacctctggcca i chlSab2.chr16 C 0 C 0 s mm10.chr11 75909288 77 + 122082543 ----------tctgactggtcctctcttggccttttacactgtgtacccttcacactctgcacttaaaccataccagccttttgtta i mm10.chr11 C 0 C 0 s canFam3.chr9 15738870 86 - 61074082 ccatctggcccctgcccacttcctcaacttccttttaccctgctta-ccacctcattctgcattcaagccacacaggcctcctgtca i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 987589 156 - 1291538 I a score=3160018.000000 s hg38.chr17_GL383563v3_alt 296884 980 + 375691 ggg-cctccacatgccctgttccttctacctcagggcctttgcacatgctgttccttctgcctggaagcgcttcccccctactcccatctaacattggcccatcttctgggtcccagtgtag----gcagcacactctc-----agcccctcctgatccccagagtaagtca-caccttcac-ccacgtccccaccgcctgttatcaccgtcaaagcaact-tacctgggtaactattcaaataatgctcacctctgcccacctgtgctttaagacca-gggactgtgttggtcctgttcactgctgtgcag-------tcagtgcctggcacatagta-gggggttagaaaacatctggtgGCAGCTGGAGGACTGAGGGGAGCCCCGAGCTGCAG-----------------CCCAGATATCCCTGAGGGTCCCACGGGACACAGCTCCCAGCTCTGCGGCTGGAG--TTTAGTACGCCTCTCCTTTCCAGAGACT-----------GTGCCAGGTACTACAAGGCAGTGCAC-CCCAGGGGAGGGGATAAAAGCATTCTCTCT-TCCAAAGGGGCTACGACAGCATTTGGCTGCTGCTGAGAGAGAGAGAAGGTCAGGGAGAGCTGAAGGGAACCCTGGAGG----GTCAGGAGTCCTGCTGGGC-CCTGT-CGAGAGCAC-AGTGGCGGAGCTCTCCTTGGAAACTCCTACCCTGCCCGGGAGGACACTTCATC-TGCCTGGCGTCAGAGGACAGAGAGGGAGACGGACCGACCTCACCCA------------CTGCGGGGGCCGCAT---GAAG--------GAGCCGAGCCCTCCTGGCGAAGGGGACCAGTTAACTGTGGTGC--AGATTCCTGCAAATCACGCATGACTCCGCTCTCCTGGGGCGTTTCGAATTAATCTTTCCATCCCCCTTTGATGTTTCAGCTCTGT-CCCCTGCAGGCTCATAACATCTAATTGCAATTTTTTTTAATTTGGTCCCACTTGGGAAATGCTTGCTCCCGTAATTGGCATGGGTTGAAGGATGAAGGGGCCCTTTTGGA s panTro4.chr17 270433 980 + 82630442 ggg-cctccacatgccctgttccttctacctcagggcctttgcacatgctgttccttctgcctggaagtgcttcccccctactcccatctaacattgacccatcttctgggtcccagtgtag----gcagcacactctc-----agcccctcctgatccccagagtaagtca-caccttcac-ccacgtgcccactgcctgttatcaccgtcaaagcaact-tacctgggtaactattcaaataatgctcacctctgcccacctgtgctttaagacca-gggactgtgttggtcctgttcactgctgtgcag-------tcagtgcctggcacatagta-gggggttagaaaacgtctggtgGCAGCTGGAGGACTGAGGGGAGCCCCGAGCTGCAG-----------------CCCAGATGTCCCTGAGGGTCCCACGGGACACAGCTCCCAGCTCTGCGGCTAGAG--TTTAGTACGCCTCTCCTTTCCAGAGACT-----------GTGCCAGGTACTACAAGGCAGTGCAC-CCCAGGGGAGGGGATAAAATCATTCTCTCT-TCCAAAGGGGCTATGACAGCATTTGGCTGCTGCTGAGTGAGAGAGAAGGTCAGGGAGAGCTGAAGGGAACCCTGGAGG----GTCAGGAGTCCTGCTGGGC-CCTGT-CGAGAGCAC-GGTGGCGGAGCTCTCCTTGGAAACTCCTACCCTGCCCGGGAGGACACTTCATC-TGCCTGGCGTCAGAGGACAGAGAGGGAGACGGACCGACCTCACCCA------------CTGCGGGGGCCACAT---GAAG--------GAGCCGAGCCCTCCTGGCGAAGGGGACCAGTTAACTGTGGTGC--AGATTCCTACAAATCACGCATGACTCCGCTCTCCTGGGGCGTTTCGAATTAATCTTTCCATCCCCCTTTGATGTTTCAGCTCTGT-CCCCTGCAGGCTCATAACATCTAATTGCAAATTTTTTTAATTTGGTCCCACTTGGGAAATGCTTGCTCCCGTAATTGGCATGGGTTGAAGGATGAAGAGGCCCTTTTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 151183 985 + 73212453 ggg-cctccacatgccctgttccttctacctcggggcctttgcacgtgctgttccttctgcctggaagtgcttcccgcctactcccatctaacattgatccatcttctgggtctcagtgcag----gcagcacactctcagggaagcccctcctgatccccagagtaagtta-caccttcac-ccacgtccccactgcctgttatcaccgtcaaagcaact-tacctgggtaactattcaaataatgctcacctctgcccacctgtgctttaagacca-aggaccgtgttggtcctgttcactgcggtgcag-------tcagtgcctggcacatagta-gggggttagaaaacatctggtgGCAGCTGGAGGACTGAGGGGAGCCCCGAGCTGCAG-----------------CCCAGATGTCCCTGAGGGTCCCACGGGACACAGCTCCCAGCTCCGCGGCTGGAG--ATTAGTATGCCTCTCCTTTCCAGAGACT-----------GTGCCAGGTACTACAAGGCAGTGCAC-CCCAGGGGAGGGGATAAAAGCATTCTCTCT-TCTAAAGGGGCTACAACAGCATTTGGCTGCTGCTGAGCGAGAGACAAGTTCAGGCAGAGCTGAAGGGAACCCTGGAGG----GTCAGGAGTCTTGCTGGGC-CCTGT-AGAGAGCAC-GGTGGCGGAGCTCTTCTTGGAAACTCCTACCCTGCCCGGGAGGACACTTCATC-TGCCTGGCATCAGAGGATAGAGAGGGAGAGGGACCGACCTCACCCA------------CTGCAGGGGCCGCGT---GAAG--------GAGCCGAGCCCTCCTGGCGAAGGGGACAACTTAACTGTGGTGC--AGATTCCTGCAAATCACGCATGACTCCACTCTTCTGGGGTGTTTCGAATTAATCTTTCCATCCCCCTTTGATGTTTCAGCTCTGT-CCCCTGCAGGCTCATAACATCTAATTGCAGATTTTTTTAATTTGGTCCCACTTGGGAAATGCTGGCTCCCGTAATTGGCATGGGTTGAAGGATGAAGGGGCCCTTTTGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 267506 979 - 81552678 gga-ccttcacacgccctgttccttctacctcagggcctttgcacatgccgttccttctgcctggaagcgcttccctcctactcccatctaacactgatccatcttctgggtctcagtgtag----gcagcacactctcagggaagcccctcctgatccccagagtaagtta-caccttcac-ccacgtccccactgcctgttatcaccatcaaagcaagt-tacctgggtaactattcaaataatgctcacctctgcccacctgtgctttaaga------gaccgtgttggtcctgttcactgctgtgcag-------ccagtgcctggcacataata-ggaggttagaaaacatctggtgGCAGCTGGAGGACTGAGGGGGGCCCCGAGCTGCAG-----------------CCCAGACGTCCCTGAGGGTCCCGCGGGACACAGCTCCCGGCCCTGCAGCTGGAGATATTAGTACGTGTCTCCTTTCCAGAGACT-----------GTGCCAGGCACGACAAGGCAGTGCAC-CCCAGGGGAGGGGATAAAAGCAT--TCTCT-TCTAAAGGGGCTACGACAGCATTTGGCAGCTGCTGAGCGACAGACAAGGTCAGGGAGAGCCGGAGGGAACCCTGGAGG----GTCAGGAGTCCCGCTGGGC-CCCGT-CGAGAGCAC-GGCGGTGGAGCTCTCCTTGGAAACTCCTACCCCGCCAGGGAGGACACTTCATC-TG-TGGGCATCAGAGGACAGAGAGGGAGAGGGACCGACCTCACCCA------------CTGCGGGGGCCGCAT---GAAG--------GAGCCGAGCCCTCCTGGCGAAGGGGACGAGTTAACTGTGGTGC--AGATTCCTGCAAATCACGCATGACTCCACTCTTCTGGGGCGTTTCCAATTAATCTTTCCACCCCCTTTTGATGTTTCAGCTCTGT-CCCCTGCAGGCTCATAACATCTAATTGCAAATTTTTTGAATTTGGTTCCATTTGGGACATGCTGGCTCCCATAATTGGCATGGGTTGAAGGATGAAGGGGCCCTTTTGGA i nomLeu3.chr19 C 0 I 529 s rheMac3.chr16 181494 978 + 80904711 ggg--ctccacttgccccgttccttctacctcggggccttcgcacgtgctgttccctctgcctggaagcgcgtccctcccactgccgtctaacgttgccccatcgtctgggtctcagtggag----gccgcacactctcagggaagcccctcctgatctc--gactaggcta-caccttcac-ccacgtccccgctgcctgttgtcaccatcaaagcaact-tacc----taactattcaaataatgcccgcctctgcccacctgtgctttaagacca-gggaccgtgttggtcctgttcactgctgtgcag-------tcagtgcctggcacgtagca-gggggttagaaaatgtctggtgGCGGCTGGAGGACTGAGGAGAGCCCCGAGCTGCAG-----------------CCCTGACGTCCCTGAGGGTCCCACGGGGCACAGCTCCCGGCTCTGCGGGTGGAA--ATCAGTATGCCTCTCCTTTCCGGAGACT-----------GTGCCAGGCTCGAGAAGGCA--GCAC-CCCAAGGGAGGGGATAAAGGCATTCTCTCT-TCTAAAGGTACTCCGGCAGCTTTTGGCTGCTGCTGAGCGAGACACAAGGTCAGGGAGCGCCGAAGGGAACCCTGGAGG----GTCACGAGTCCTGCTGGGC-CGTGT-CTAGAGCAC-AGTGGCAGCGCGCTCCTTGGAAACTCCTACCCTGCCTGGGAGGACACTTCATC-TGCCCGGCATCAGAGGACAGGGAGGGAGAGGGACCGACCTCACCCA------------CTGTGGGGGCCGCAC---GAAG--------GAGCTGAGCCCTCCCAGCGAAGGAGAGAAGTTAACTGTGGTGCCAAGATTCCTGCAAATCACGCAGGACTCCACTCTTCTCGGGCGTTTCAAATTAGTTTTTCTACTCCCCTTTGATGTTTCCGTTCTGT-CCCCTGCAGGTTCGTAACATCTCATTACAAAGTGTTTGAATTTGGTCCCATTTGGGAAACGCTGGCTCCCGTGATCGGCATGGGTTGAAGGACGAAGGGGCCTGTTTGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 193616 978 + 80997621 ggg--ctccacttgccccgttccttctacctcggggccttcgcacgtgctgttccctctgcctggaagcgcgtccctcccactgccgtctaacgttgccccatcgtctgggtctcagtggag----gccgcacactctcagggaagcccctcctgatctc--gactaggcta-caccttcac-ccacgtccccactgcctgttgtcaccatcaaagcaact-tacc----taactattcaaataatgcccgcctctgcccacctgtgctttaagacca-gggaccgtgttggtcctgttcactgctgtgcag-------tcagtgcctggcacgtagca-gggggttagaaaatgtctggtgGCGGCTGGAGGACTGAGGAGAGCCCCGAGCTGCAG-----------------CCCCGACGTCCCTGAGGGTCCCACGGGGCACAGCTCCCGGCTCTGCGGGTGGAA--ATCAGTATGCCTCTCCTTTCCGGAGACT-----------GTGCCAGGCTCGAGAAGGCA--GCAC-CCCAAGGGAGGGGATAAAGGCATTCTCTCT-TCTAAAGGTACTCCGGCAGCTTTTGGCTGCTGCTGAGCGAGACACAAGGTCAGGGAGCGCCGAAGGGAACCCTGGAGG----GTCACGAGTCCTGCTGGGC-CGTGT-CTAGAGCAC-AGTGGCAGCGCGCTCCTTGGAAACTCCTACCCTGCCTGGGAGGACACTTCATC-TGCCCGGCATCAGAGGACAGGGAGGGAGAGGGACCGACCTCACCCA------------CTGTGGGGGCCGCAC---GAAG--------GAGCTGAGCCCTCCCAGCGAAGGAGAGAAGTTAACTGTGGTGCCAAGATTCCTGCAAATCACGCAGGACTCCACTCTTCTCGGGCGTTTCAAATTAGTTTTTCTACTCCCCTTTGATGTTTCCATTCTGT-CCCCTGCAGGTTCGTAACATCTCATTACAAAGTGTTTGAATTTGGTCCCATTTGGGAAACGCTGGCTCCCGTGATCGGCATGGGTTGAAGGACGAAGGGGCCTGTTTGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 178812 978 + 74645514 GGG--CTCCACTTGCCCCGTTCCTTCTACCTCGGGGCCTtcgcacatgctgttccctctgcctggaagcgCGTCCCTCCCACTGCCGTCTAACGTTGCCCCATCGTCTGGGTCTCAGTGGAG----GCCGCACACTCTCAGGGAAGCCCCTCCTGATCTC--GACTAGGCTA-CACCTTCAC-CCACGTCCCCACTGCCTGTTGTCACCATCAAAGCAACT-TACC----TAACTATTCAAATAATGCCCGCCTCTGCCCACCTGTGCTTTAAGACCA-GGGACCGTGTTGGTCCTGTTCACTGCTGTGCAG-------TCAGTGTCTGGCACGTAACA-GGGGGTTAGAAAATGTCTGGTGGCAGCTGGAGGACTGAGGAGAGCCCCGAGCTGCAG-----------------CCCCGACGTCCCTGAGGGTCCCACGGGGCACAGCTCCCGGCTCTGCGGGTGGGA--GTTAGTACGCCTCTCCTTTCCGGAGACT-----------GTGCCAGGCTCGAGCAGGCA--GCAC-CCCAAGGGAGGGGATAAAGGCATTCTCTCT-TCCAAAGGTGCTCCGGCAGCTTTTGGCTGCTGCTGAGCGAGAGACAAGGTCAGGGAGTGCCGAAGGGAACCCTGGAGG----GTCACGAGTCCTGCTGGGC-CGTGT-CTAGAGCAC-AGTGGCAGCGCGCTCCTTGGAAACTCCTACCCTGCCTGGGAGGACACTTCATC-TGCCCGGCATCAGaggacagggaggcagagggaccaACCTCACCCA------------CTGTGGGGGCCGCAC---GAAG--------GAGCTGAGCCCTCCCGGCGAAGGAGAGAAGTTAACTGTGGTGCCAAGATTCCTGCAAATCACGCAGGACTCCACTCTTCTCGGGCGTTTCAAATTAGTTTTTCTACTCCCCTATGATGTTTCCGTTCTGT-CCCCTGCAGGTTCGTAACATCTCATTACAAAGTGTTTGAATTTGGTCCCATTTGGGAAACGCTGGCTCCCGTGATTGGCATGGGTTGAAGGACGAAGGGGCCCGTTTGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 169465 975 + 75148670 ggg--ctccacttgccgtgttccttctacctcggggccttcgcacgtgctgttccctctgtctggaagcgcgtccctcccactgccatctaacgttgccccatcgtctgggtctcagtggag----gccgcacactctcagggaagcccctcctgatctccagagtaggcta-caccttcac-ccacgtccccactgcctgttgtcaccatcaaagcaact-tac--------ctattcaaataatgcccgcctctgcccacctgtgctttaagacca-gggaccgtgttggtcctgttcactgctgtgcag-------tcagtgcctggcatgtagca-gggggttagaaaatgtgtggtggtggctgaaGGACTGAGGAGAGCCCCGAGCTGCAG-----------------CCCCGACGTCCCTGAGGGTCCCACAGGGCACGGCTCCCGGCTCTGCGGGTGGAA--ATCAGTATGCCTCTCCTTTCCGGAGACC-----------GTGCCAGGCTCGAGAAGGCA--GCAC-CCCAGGGGAGGGGATAAAAGCATTCTCTCT-TCTAAAGGTGCTATGGCAGCTTTTGGCTGCTGCTCAGCGAGAGACAAGGTCAGGGAGCACCGAAGGGAACCCTGGAGG----GTCACGAGTCCTGCTGGGC-CGTGT-CTAGAGCAC-AGTGGCAGTGCTCTCCTTGGAAACTCCTACCCTGCCTGGGAGGACACTTCATC-TG-CCGGCATCCGAGGACAGGGAGGGAGAGGGACTGACCTCACCCA------------CTGTGGGGGCCGCAT---GAAG--------GAGCTGAGCCCTCCCAGCGAAGCAGAGAAGTTAACTGTGGTGCCAAGATTCCTGCAAATCACGCAGGACTCCACTCTTCTCGGGCGTTTCAAATTAGTTTTTCTACTCCCCTTTGATGTTTCCGTTCTGT-CCCCTGCAGGTTCGTAACATCTAATTGCAAAGTGTTTGAATTTGGTCCCATTTGGGAAATGCTGGCTCCCGTGATCGGCATGGGTTGAAGGACGAAGGGGCCCGTTTGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 987745 964 - 1291538 ggg-cccttgcacgtgctgtttcttctgcctcggggcccttgcacgtgccactccttctgcctggaagtgcttccctcccactcccatctaacattcacccatcttctgggtctcagtgtag----gcagcacagtctcagggaagcccctcctgatccccagactaggttagcaccttcactctacatccccactgcctgttatcatcgtcaaagccacc-tacctgggtaactactgaaataacactcacctctgcccacctatgctttaaaactaggggactgtgttggtccttttcacttctgtgcag-------tcaatgcctggtacggagtg-gcgggtttgaaaatgtctgatgGCAGCTGGAGGACTGAGGGGAGCCCCGAGCCACAG-----------------CCCAGACTTCCACAAGGGCCCCACAGGGCACAGCTCCCAGCTCTGCAGCCAGAG--ATTCATACACTGCTCATGTCCAGAGAC-------------TGCCAGGCATTCTGAGGCAGTGCAC------------------------TCTCCCC-TCTAAAGGTGCTACAACAGCTTCTGGCTGCTGCTGAGCAAG--ACAAGGTCAGTGAGAGCTTAAGAAAACCCTGGAGG----GGTCAGGACCCTATTGGGC-CCTGGATGAGAACATGGGTAGTGGAGCTCTCCTTAGAAGCCCCAACCCGGCCCGGGGGGACGCTTCAGC-TGCCTGGCATCAGAGCACAGAGACGGAGAGGGGCCAACCTCATCCC------------CTGCA-GGGCTGCAC---GAAG--------GAGCTGAGCCCTCCTGGCAAAGGGGACAAATTAACTGTGGTGCAAAGCCTCCTGCAAATCACGCATCACTCCACTCTTCCTTGGCATTTTGAATTAAGTTCTCTATCCGTCTCTGATATCTCCACCCTGT-CCCCTGTAGGCTCATAACATCTAATTGCAAATTTTTTGAACCTGGTCCCATTTGGGAAATGCTGGCTCCCATCATTGGCATGGGCTGACGAATGAAGGGGCCCTTTTGGA i calJac3.chrUn_GL286409 I 156 C 0 s mm10.chr11 75909365 889 + 122082543 ggattctctgtatgctatgttccttctaccccagggcctttgcacatgctgttttgtatgcttagaa---ctttctccatatttccatgtaacATTTACC---TCTCTGAGTC-AAGAGAAGAATCATAGAAGAATCATGTAAAAGAAGGTCTTGGTCCCT-GACCCAGTTA-ATACCCCAC-C--CCTACCTACTGCCAATCATCATCAACAACAGAATT-CACATCTTTAAGTATCCATACAACTTTGACCTCTCCCCATCTCTGCTTTAATATGA-AAGACCA-ATTGA----GTTTAGGTATGTGGAGAGACACCTGGGTGCTTGGAAGGAAGAATGTGGGTTGGAAAACTCTCTGTG-----------------------------------------------------------TTTCCTAGGGGGTCTACTGGACTCGATGTCTAGCTCTGCAACGGGCA-------------TCTGTCTCTCAGACAC----------------------------------ACAC-CT---GGGAGGAGACA----CACTGGCTCT-TCT-GAGAGGCTAGGACAGC-TTCAGCAGCTGGTGAATGAGAGACAAAGTTGGGAA----TGAAGGGGATGCTGGAAG----GTCAAGGGACA-GCTGGGCTCTTGG-ACGAGGTCC-AAGAGCTGAGGTCTCCCAGCAATGTGC-ACCCTGCCAGAGAGGGCACCTAATT-GGCCTGGCATCAG-----AGATGGTGAGTGGGACCAATCTCATCCCTAGTCATTCTCTCTGCAGGGGTGAGGTGGGGGGG--------GGGCTGAGGCACCCAGATGGAGGAGA---------------GCAAGGATGCTCACACATCACATGCGACGCCATTCTTCCTGAGCGTTTCAGATGGATTTTTCTATCCACCTTTGATGTCTCAGCTCTGA-CTCCCACAGGCTTCTAACGTCTAATTGCGAATTTCTTAAGCTTGGTCCCAGTTGGGAAATGCTGGCTTCTGATGCCAACACAGTCTGATAGCTGCAGGGATGTTCTTGT- i mm10.chr11 C 0 C 0 s canFam3.chr9 15738956 1008 - 61074082 ggc-cctctattcattctgttccttctacctcagggcctttgcacatgttcttccttctgtttagaatcttcttccccctatgtccatctaatatttatccctcctccaggactcaa---------acatcacattctcaggcaagcctctatatacccccagattaagtcagcatctgtct-tcac---tccactgcctgtttccactgtagaagtagctacacatgggtaattacatgtataatgttcacgtctccccatcagtgccttaagatga-aggaccatgttcatcttgttcactgctgtgcaa-------tcagtgcctgggacatagta-ggggtttagaaaatgtctgatgGT-TCTGGAGGACAGA-------CCTGAGTTGAAGCCAGGGAACGTAACTTCCCCGGACCTCCCAGAGGAACCCTCAGGGCACAGCACCCAGATGC-------AAG--ATTTGTAGTACTCTTCTTTACGGAGCCTGGCATTACAAGGAGCCTGGCATTACAAGGCA--GCACACCCTGGGGAGGAGATCAAAGCATTTGCTCTATTCAAAGATGCTACAACAGCTTCTGGCTGCTGCTGAGTGCAAGACAAGGTCAGGGAGAACTGATGGAAATGCCAAAGGGGCTGCCAGGGGTCACACTAGGC-CCTGG-------TAC-AAGAGCACAGCTCTCCCCAGCTCCTTGTATCCTGCCAGGGAGGACACATCATCTTGCCTGGGATCAGAG--CAGAGAGGGAGAGGGGCTGGCTTCTTCCCTGGTCTCTCCC-CTATGGGGGCTGTGC---AGGGGCCAAACAGAGCTAAGCCATCCCAGAGAGAGGAACAAATTAACTGTTGCACAGAGATTCCTGCAAATGAGGCAGGACTCAACTCTT---GGGCATTTTGGATTAGTTTTTCTATCTGTCTTTGATGTTTCAGCTCTGTCCCCCTGCAGGCCTATAACATCTAATTGCAAATTTCTTGAACTTGGTCCCATTTGGGAAATGCTGGCTTCCATAATTGGCATGGTTTGACAGATAGAGAGGCATTCTTGGG i canFam3.chr9 C 0 C 0 a score=312769.000000 s hg38.chr17_GL383563v3_alt 297864 129 + 375691 CTTATCACATGCCAGAGA------CGCCCAGCCCCTCTGAGGGACAGCGAGGGACTGGAAGGCAGGCAAGGCATCTGAGAACTCCCA--TCTCCAGCCACAGT-G-----------------------------------CACAGTCGGTGGAGATGGCCTGACCTACCCAGA s panTro4.chr17 271413 129 + 82630442 CTTATCACATGCCAGAGA------CGCCCCGCCCCTCTGAGGGACAGGGAGGGACTGGAAGGCAGGCAAGGCATCTGAGAACCCCCA--TCTCCAGCCACAGT-G-----------------------------------CACAGTCGGTGGAGATGGCCTGACCTACCCAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 152168 129 + 73212453 CTTATCAGACGCCAGAGA------CACCCAGCCCCTCTGAGGGACAGGGAGGGACTGGAAGGCAGGCAAGGCATCTGAGAACCCCCA--TCTCCAGCCACAGT-G-----------------------------------CACAGTCAGTGGAGCTGGCCTGACCTACCCAGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 182472 128 + 80904711 CTTATCAGACGTCGGAGA------CCCCCAGCCCCTCGGAGGGACAGGGAGGGGCTGGAAGGCAGCCGAGGCACCTGAG-ACCCCCA--TCTGCAGCCACAGT-G-----------------------------------GACAGTCGGTGGAGATGGCCTGACCTACCCAGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 194594 128 + 80997621 CTTATCAGACGTCGGAGA------CCCCCAGCCCCTCGGAGGGACAGGGAGGGGCTGGAAGGCAGCCGAGGCACCTGAG-ACCCCCA--TCTGCAGCCACAGT-G-----------------------------------GACAGTCGGTGGAGATGGCCTGACCTACCCAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 179790 128 + 74645514 CTTATCAGACGTCGGAGA------CCCCCAGCCCCTCGGATGGACAGGGAGGGGCTGGAAGGCAGCCGAGGCACCTGAG-ACCCCCA--TCTGCAGCCACAGT-G-----------------------------------GACAGTCGGTGGAGATGGCCTGACCTACCCAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 170440 128 + 75148670 CTTATCAGACGTCAGAGA------CCCCCAGCCCCTCGGAGGGACAGGGAGGGGCTGGAAGGCAGCCGAGGCACCTGAG-ACCCCCA--TCTGCAGCCACAGT-G-----------------------------------GACAGTCGGTGGAGATGGCCTGACCTACCCAGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 988709 132 - 1291538 CTTACCAGACG-CAGAGACCCCCGCCCCCAGCCACTCAGAGGGACAGGGAGGGACTGGAAGGCAGGCGAGGC--CCGAGAGCCCCCA--TCTCCAGCCATGGT-G-----------------------------------GACAATCTTCGGAGATGACCTACCCTACCCGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75910254 159 + 122082543 CCTATCAGA-GCCAGGGA------TGGC---ACCCACCAGAGATCTGGAACAGACTAGAGGGCATGAGGGGCATCTGAG-AGGCTCA--GCCACAGGGACACt-gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCGGGGGGGGGGGCAGGCCAGGCCCAACCAAA i mm10.chr11 C 0 C 0 s canFam3.chr9 15739964 130 - 61074082 CTTACCAGACACCAGGGA------CCTCCAAATCCCTGGATAGATGGGGA-AGACTGAAAGGCAGGAAAGGCATCCAGG-AGGCCCAGGCCTCTGGCCATGGGAG-----------------------------------GAAAGTAGGTAGAGATGGCCTAACCTAACTGCA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 268485 529 - 81552678 I a score=95419.000000 s hg38.chr17_GL383563v3_alt 297993 23 + 375691 GCTGAGAGGTCACTAGGCTGAGG s panTro4.chr17 271542 23 + 82630442 GCTGAGAGGTCACTAGGCTGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 152297 23 + 73212453 GCTGAGAGGTCACTAGGACAAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 81283665 23 + 81552678 GCTGAGAGGTCACTAGGCTGAGG i nomLeu3.chr19 n 529 C 0 s rheMac3.chr16 182600 23 + 80904711 GCTGAGAGCTCACTAGGCTGAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 194722 23 + 80997621 GCTGAGAGCTCACTAGGCTGAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 179918 23 + 74645514 GCTGAGAGCTCACTAGGCTGAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 170568 23 + 75148670 GCTGAGAGCTCACTAGGCTGAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 988841 23 - 1291538 GCTGAGAGGTCACTAGGCTGAGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75910413 23 + 122082543 ATTGAAGGGTCACTAGTCTGAGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15740094 23 - 61074082 TCTGAGGGGCCACCAGGATGGGG i canFam3.chr9 C 0 C 0 a score=513443.000000 s hg38.chr17_GL383563v3_alt 298016 192 + 375691 GACAGCAGGAAAACCAGggccaggcgcggtggctcacgcctgtaatcccagcactttgggagac-caaggcgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtaaaacccccgtctctactaaaaatacaaaaattagcccattgtggtagtgggcacctgtaatcccagctact s panTro4.chr17 271565 192 + 82630442 GACAGCAGGAAAACCAGggccaggcgcggtggctcacgcctgtaatcccagcactttgggagac-caaggcgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtaaaacccccgtctctactaaaaatacaaaaattagcccattgtggtagtgggcacctgtaatcccagctact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 152320 192 + 73212453 GATAGCAGGGAAACCAGggccaggcgcagtggctcacgcctgtaatcccagcactttgggagac-caaggcgggtggctcacttgaggtcaggagttcgagaccagcctggccaacatggtaaaacccccgtatctactaaaaatacaaaaattagcccattgtgatagggggcacctgtaatcccagctact i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 81283688 192 + 81552678 GATAGCAGGAAAACCAGggccaggcgcagtggctcacgcctgtaatctcagcattttgggagac-caaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtaaaactcccgtctctactaaaaatacaaaaattagcccattgtggtagtgggcacctgtaatcccagctact i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 182623 189 + 80904711 GATTGCAGGAAAACCAGggccgggcacggtggctcatgtctgtaaccccagcgctttgggagac-caaggcgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaacccccgtctctaccaaaaatacaaaaattagcccatcgtggtgg---tcacctgtaatcccagctact i rheMac3.chr16 C 0 C 0 s macFas5.chr16 194745 189 + 80997621 GATTGCAGGAAAACCAGggccgggcacggtggctcatgtctgtaaccccagcactttgggagac-caaggcgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaacccccgtctctaccaaaaatacaaaaattagcccatcgtggtgg---gcacctgtaatcccagctact i macFas5.chr16 C 0 C 0 s papAnu2.chr16 179941 188 + 74645514 GATTGCAGGAAAaccagggccgggcacggtggctcatgtctgtaaccccagcactttgggagac-caaggcgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggcaaaacccccgtctctaccaaaaatacaaaaattagcccatcgtggtgg----cacctgtaatcccagctact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 170591 192 + 75148670 GATAGCAGGAAAACCAGggccgggcacggtggctcatgtctgtaatcccagcactttgggagac-caaggtgggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacccccgtctctaccaaaaatacaaaaattagcccatcgtggtggcaggtgcctgtaatcacagctact i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 988864 181 - 1291538 GACAGCAGGAAAACCAGggctgggcgcagtggctcacacctgtcatcccagcactttgggaggc-caagggaggcaga----ctgaagtcaatagatcaagaccagcctggccaacatggtgaaacccc---atgtacttaaaatacacaa--ta--ccactgtggtagcaggcgcctgtaatcccagctact i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75910436 65 + 122082543 GGTAATAGGAAAATGAAGACC-------------------------TCCAAAA-------AGACACAAGG-----GAATCACAGAAGGACA------------------------------CAGACCCC-------------------------------------------------------------ACT i mm10.chr11 C 0 C 0 e canFam3.chr9 15740117 0 - 61074082 C a score=133814.000000 s hg38.chr17_GL383563v3_alt 298208 52 + 375691 cgg------gaggcaggagaattgcttaaaccag-ggaggcagaggctgcagtgagcta s panTro4.chr17 271757 52 + 82630442 cag------gaggcaggagaattgcttaaaccag-ggaggcagaggctgcagtgagcta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 152512 49 + 73212453 cag------gaggc---agaattgcttaaaccag-ggaagcagaggctgccgtgagcta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 81283880 52 + 81552678 cgg------gaggcaggagaattgcttaaaccag-ggaggcagaggctgcagtgagcta i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 182812 52 + 80904711 cgg------gaggcaggagaatcgcttgaacctg-ggaggcagaggttacagtgagctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 194934 52 + 80997621 cgg------gaggcaggagaatcgcttgaacctg-ggaggcagaggttacagtgagctg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 180129 52 + 74645514 cgg------gaggcaggagaatcgcttgaacccg-ggaggcagaggctacagtgagctg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 170783 52 + 75148670 cgg------gaggcaggagaatcgcttgaaccca-ggaggcagaggctacagtgagctg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 989045 58 - 1291538 caggagactgaggcaggagaatcgcttgaaccca-ggaggcagaggttgctgtgagctg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75910501 53 + 122082543 AAG------GACGTAGGAAAGATGCTGTAGCCAGCGGTGGTCTCTACTGAAGTGAGCTG i mm10.chr11 C 0 I 49 s canFam3.chr9 15740117 7 - 61074082 CGG------GGGG---------------------------------------------- i canFam3.chr9 C 0 C 0 a score=726367.000000 s hg38.chr17_GL383563v3_alt 298260 263 + 375691 agatcgtgccattgcactccagcctgggcgac--------------------------------aAGAAAAAAGAAAGCCAGGACCCCCAAGGGAAGAAACTGGAAGCAAGGAACTAGCGAGATTCTCAGGAGAGCACAGAGAAGGCCCTGGGGCAGCTTGGGGCTGGTT---GTGCTTCAGCCTCAGGGGCAGCGCCTCGTCCACTGCAACAGACTTTTGTTCCC-CCGTCTGACAGTGCCAAGCACTGGGCTAT-GACTGGGCATCCAGAGATCAAAATCTC----CCTGTCTTAAGGGACT s panTro4.chr17 271809 263 + 82630442 agatcgggccattgcactccagcctgggcgac--------------------------------aAGAAAAAAGAAAGCCAGGACCCCCAAGGGAAGAAACTGGAAGCAAAGAACTAGCGAGATTCTCAGGAGAGCACAGAGAAGGCCCTGGGGCAGCTTGGGGCTGGTT---GTGCTTCAGCCTCAGGGGCAGCGCCTCGTCCACTGCAACAGACTTTTGTTCCC-CCGTCTGACAGTGCCAAGCACTGGGCTAT-GACTGGGCATCCAGACATCAAAGCCTC----CCTGTCTTAAGGGACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 152561 262 + 73212453 aaattgtgccattgcactccagcctgggcgac--------------------------------aagaAAAAAGAAAG-CAGGACCCCCAAGGGAAGAAACTGGAGGCAAAGAACTAGTGAGATTCTCAGGAGAGCACGGAGAAGGCCCTGGGGCAGCTTGGGGCTGGTT---GTGCTTCCGCCTGAGGGGCAGCTCCtcgtccattgcaacagacctttgttctc-ctgtctgacagtgccaagcactgggctat-gactggacatccagagatcaaaggctc----cctgtattaagggact i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 81283932 262 + 81552678 agattgtgccattgcactccagcctaggcgac--------------------------------aAGAAAAAAGAAAGCCAGGACCCCCAAGGGAAGAAACTGGAAGGAAGGAACTAGCGAGATTCTCAGGAGAGCACGGAGAAGGCCCTGGGACAGCTTGGGGCTGGTT---GTGCTTCAGCCTGAGGGGCAGCTCCTCCTCCATTGCAACAGACC-TTGTTCCC-CTGTCTGACAGTGCCAAGCACTTGGCTAT-GACTGGGCATCCAGAGATCAAAGGCTC----CCTGTCTTAAGGGACT i nomLeu3.chr19 C 0 n 0 s rheMac3.chr16 182864 292 + 80904711 agatcgcaccactgcactccagcctgggtgacacagtgagaatccgtct--aaaaaaaaaaaaaaaaaaaaaggaaaaCCAGGACCCCCAAGCGAAGAAACTGGAAGTGAGGAACTAGTGGGGTTCTCAGGAGAGCGCGGAGAAGGCCCTGGGACAGCTCTGGGCTGGTC---GCGCTTCGGCCTGAGGGGCAGCTCttcgtccatt-cgacagacctttgttccc-ccgtctcacagtgccaggcactcggctat-gactgggcatccagggaccaaaggctc----cctgtcttaagggact i rheMac3.chr16 C 0 C 0 s macFas5.chr16 194986 294 + 80997621 agatcgcaccactgcactccagcctgggtgacacagtgagactccgtctaaaaaaaaaaaaaaaaaaaaaaaggaaaaCCAGGACCCCCAAGGGAAGAAACTGGAAGTGAGGAACTAGTGAGGTTCTCAGGAGAGCGCGGAGAAGGCCCTGGGACAGCTCTGGGCTGGTC---GCGCTTCGGCCTGAGGGGCAGCTCTTCGTCCGTT-CGACAGACCTTTGTTCCC-CCGTCTCACAGTGCCAGGCACTCGGCTAT-GACTGGGCATCCAGGGACCAAAGGCTC----CCTGTCTTAAGGGACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 180181 293 + 74645514 agatcgcgccactgcactccagcctgggtgacacagtgagactcagtct-taaaaaaaaaaaaaaaaaaaaaggaaaaccaggaCCCCCAAGGGAAGAAACTGGAAGTGAGGAACTAGTGAGGTTCTCAGGAGAGCACGGAGAAGGCCCTGGGACAGCTCTGGGCTGGTC---GTGCTTCGGCCTGAGGGGCAGCTCTTCGTCCATT-CGACAGGCCTTTGTTCCC-CCGTCTCACAGTGCCAGGCACTCGGCTAT-GACTGGGCATCCAGGGACCAAAGGCTC----CCTGTCTTAAGGGACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 170835 284 + 75148670 agatcgcgccactgcacttcagcctgggtg--acagtgagactcagtct--------taaaaaaaaaaaaaaggaaaaCCAGGACCCCCAAGGGAAGAAACTGGAAGTGAGGAACTAGTGAGGTTCTCAGGAGAGCGCGGAGAAGGCCCTGGGACAGCTCTGGGCTGGTC---GCGCTTCGGCCTGAGGAGCAGGTCTTCGTCCATT-CGACAGACCTTTGTTCCC-CCGTCTCATGGTGCCAGGCACTCGGCTAT-GACTGGGCATCCAGGGATCAAAGGCTC----CCTGTCTTAAGGGACT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 989103 286 - 1291538 agatcacaccactgtactccagcctgggcaaaagagtgagactccatctca-------------aaaaaaaaaaaaaGCCAGGACCCCCAAGGGAAGAAGCCAGAAGCCAGGAACTAGTGAGATTCTCAGGAGCGTGTGGGGAAGACCCGGGAACA--TCGGAGCTGACT--GGTGCTTCAGCCTGAGGGGCAGCGCCtcattcgtt-caacagacctctgtccccaccatctgacagtgccaagtgtgtggctatggagtgggcatccagagatcaaaggctccttgcctgccttaagggact i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15740124 215 - 61074082 --------------------------------------------------------------------GACAGGAAAACTGGGA-TCCTAAGGGAAAAAAC--------AAGAACCAGAGAGACCCT---GACAGGGCACAAAAGAGACTGGGGATGCTTTGAGGTGGACTGTGTGTTTCAGCCCAGACGGCAACACTTCGTTCACT-TAACAAGCCTTTACTCTG-TC--CTGTAAGTGCCAGGCATTCACCATG-AAGTAGGTATCCAAGTATCCAAGGCTT----CCTACCTCCGGGGGTT i canFam3.chr9 C 0 C 0 e mm10.chr11 75910554 49 + 122082543 I a score=35952.000000 s hg38.chr17_GL383563v3_alt 298523 14 + 375691 TGCAGTCCTACAGC s panTro4.chr17 272072 14 + 82630442 TGCAGTCCTACAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 152823 14 + 73212453 cgcagtcctatggC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 183156 14 + 80904711 tgcagtcCTACGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 195280 14 + 80997621 TGCAGTCCTACGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 180474 14 + 74645514 TGCAGTCCTACGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 171119 14 + 75148670 TGCAGTCCTACGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 989389 14 - 1291538 tgcagtcctaaggc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15740339 14 - 61074082 TGGGGACCAAAGGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75910554 49 + 122082543 I e nomLeu3.chr19 81284194 0 + 81552678 I a score=766076.000000 s hg38.chr17_GL383563v3_alt 298537 287 + 375691 TCAGTGA----------------CAGGAGAGAAGGCACACGAGGTGGTGTGGGT----CCCTTAcagcctgt--tgatagaaaggacacacaggctaaggagtcagctggacccaggtgtgggttgcagccctgccacccacaagttaagtgatgtgggcaaggagctca-gcctcactttgctcatcagggaaatggggataaattctgcatggtagtt--aaatgagtga---atggctgt------------gtccagggcctggagtgtggcatgcaTCCGACAGGCACCTCTCTCCAAACATCTCT--TTCTGGGCCCCTGGGA s panTro4.chr17 272086 284 + 82630442 TCAGTGA----------------CAGGAGAGAAGGCACATGAGGTGGTGTGGGT----CCC-TGCCGCCTGT--TGAtagaaagg--acacaggctaaggagtcagctggacccaggtgtgggttgcagccctgccacccacaagttaagtgatgtgggcaaggagctca-gcctcactttgctcatcagggaaatggggataaattctgcatggtagtt--aaatgagtga---atggcttt------------gtccagggcctggAGTGTGGCGTGCATCTGACAGGCACCTCTCTCCAAACATCTCT--TTCTGGGCCCCTGGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 152837 286 + 73212453 TCAGTGA----------------CAAGAGAGAAGGCACATGAGGGGGTGTGGGT----CCC-Tgcagcctgt--tgatagaaagg--acacaggcttaggagtcagctggatccaggtgtgggtcgaagccctgccacccacaagttaagtgacgtgggcaaggagctca-gcctcacttttctcatctggaaaatggggataaattctgcatggcagtt--aaatgagtga---atggctgt------------GTCCAGGGCCTGGAGTGTGGTGTGCATCCGACAGGCACCTCTCTCCAAACATCTCTCCTTCTGGGCCCCTGGGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 183170 286 + 80904711 TCAGTGA----------------CAAGAGAGAAGGCACGTGAGGTGAGGTGGGT----CCC-Tgcggccttttgtgatagaaagg--acacaggcttaggagtcggctgcacccaggtgcgggtcgcagccctgccacccacaagttaagtgacgtaggcaaggagctca-gcctcacttttctcatctgggaaacggggataaATTCTGCACGGTAGTT--GAATGAGTGG---ATGGCTGT------------GTCCAGGGCCCGGAGTGTGGTGTGCATCCGACAGGCACTTCTCTGCAAACACCTCT--TTCAGGGCTCCTGGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 195294 286 + 80997621 TCAGTGA----------------CAAGAGAGAAGGCACGTGAGGTGAGGTGGGT----CCC-Tgcggccttttgtgatagaaagg--acacaggcttaggagtcggctgcacccaggtgcgggtcgcagccctgccacccacaagttaagtgacgtaggcaaggagctca-gcctcacttttctcatctgggaaacggggataaATTCTGCACGGTAGTT--GAATGAGTGG---ATGGCTGT------------GTCCAGGGCCCGGAGTGTGGTGTGCAGCCGACAGGCACTTCTCTGCAAACACCTCT--TTCAGGGCTCCTGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 180488 286 + 74645514 TCAGTGA----------------CAAGAGAGAAGGCACGTGAGGTGAGGTGGGT----CCC-TGCGGCCTTTTGTGATAGAAAGG--ACACAGGCTTAGGAGTCGGCTGGACCCAGGTGCGGGTCGCAGCCCTGCCACCCACAAGTTAAGTGACGTAGGCAAGGAGCtca-gcctcacttttctcatctgggAAATGGGGATAAATTCTGCACGGTAGTT--GAATGAGTGG---ATGGCTGT------------GTCCAGGGCCCGGAGTGTGGTGTGCATCCGACGGGCACTTCTCTGCAAACACCTCT--TTCAGGGCTCCTGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 171133 286 + 75148670 TCAGTGA----------------GAAGAGCGAAGGCACGTGAGGTGGGGTGGGT----CCC-Tgcagccttttgtgatacaaagg--acacaggcttaggagtgggctggacccaggtgcgggtcacagccctgccacccacaagttaagtgacgtgggcaatgagctca-gcctcacttttctcatctgggaaatggggataaATTCTGCATGGTAATT--GAATGAGTGA---ATGGCTGT------------GTCCAGGGCCCGGAGTGTGGTGTGCATCCGACAGGCACTTCTCTCCAAACACCTCT--TTCAGGGCTCCTGGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 989403 301 - 1291538 ttagtga----------------caagagagaaggca-atgaGGTGGTATGGGTTAGGCCC-Tgcagcctgatgtgagagaaaga--acacaggattaggagtcagctggaccgaggtgtgggtcgcagccctgccacgcacaagctaagtggcgtgggcagggagctca-gcctcaccttcctcatctgggaaatggggataaattctgcatggcagtt--gaatgagtga---atggccattataagtgtccagctcagggccaggACTGTGGTGTGTGTCCAGCAGGCACTTCTCTCCAAACCTGTCT--TTCTGAGCCCCTGGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75910603 256 + 122082543 TCAGGGA----------------CAAGAGCAGGCCCA-ATGGGGAAGTCTTGCT----CCC-TGTGGGCTGTTGTg----aaaga--gcacaggtgtgggagtcagctggacttggatgtaggttccagcccagccactgac-----aagggacacgggcaaggagtgaaggcctcattttccttatctgagaaatgggaa---------caTGTTAGTTCGTGGTGAGTAATACATAAGCAT-----------------GGGCC--GAGAGTGGTGTGCATTTGACATCCGCCTCTCTCCAAACTCCTCC------------CTGGGG i mm10.chr11 I 49 I 1 s canFam3.chr9 15740353 281 - 61074082 TCAGTGATGGGGATTTATACTCTCAGCAGAGAAGGCAGAGGAAGTGGTTTGATC----CCC-TGTAGCCTGCTGTA--------G--CCA------TGggagacaggtgggcctaagtgtgggtcccaaccctgccat-----------------tgggcaaggggctca-gcctccctttcttcctcgtaaaaatgagggtcaattccatatggcagtt--aaataagtga---atggctgt--taagtgctgaccgcggggcctggAGTGTGGTGTGCATTAGACATGCACTTGTCTCCAAATGCCTCT--TTCTGAGTCCCTGATA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 81284194 0 + 81552678 I a score=971752.000000 s hg38.chr17_GL383563v3_alt 298824 298 + 375691 ATGAATCTTG---CTGAAGAC-AGGAGAGGAGCAGGGAGGCAGAAGGAAGGGACGGCCTGG-GGGGCC-----------CCAGAGGTACTCACTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTGATCATTCCCGCTGCCGAAGATGGTGTCGGCCATGGCTCGGAGCACCCGGC-TGGGGGTTGGGAGTCACATCTGAGATGAAGGAGGGAAGACGAAAGAGTGTGCATCATTGGCTGGGGTACAGATGG------------------------------------------------------CAGACAGGTTCTCTGTGC-----------------------------------CCTCA--------------G--GCCCCTCCACACC--ATCTCCATGCACGAT s panTro4.chr17 272370 280 + 82630442 ATGAATCTTG---CTGAAGAC-AGGAGAGGAGCAGGGAGGCAGAAGGAAGGGACGGCCTGG-GGGGCC-----------CCAGAGGTACTCACTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTGATCATTCCCGCTGCCGAAGATGGTGTCGGCCATGGCTCGGAGCACCCGGC-TGGGGGTGGGGAGTCACATCTGAGATGAAGGAGGGAAGACGAAAGAGTGTGCATCATTGGCTGGGGTACAGATGG------------------------------------------------------CAGACAGGTT---------------------------------------------------------------------CTCCACACC--GTCTCCATGCACGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 153123 298 + 73212453 ATGAATCTTG---CTAAAGAC-AGGAGAGGAGCAGGGAGGCAGAAGGAAGGGAAGGCCTGG-GGGGCC-----------CCAGAGGTACTCACTTGGCTCGAAGGGCAAGGTGCCGGTCATTGGGGCAAACCCACTGATCATTCCCACTGCCGAAGATGGTGTCGGCCATGGCTCGGAGCACCCGGC-TGGGGGTGGGGAGTCACATCTGAGATGAAGGAGGGAAGACAAAAGAGTGTGCATCACTGGCTGGGGTACAGATGG------------------------------------------------------CAGACAGGGTCTCTATGC-----------------------------------CCTCG--------------G--GCCCCTCCACCCC--ATCTCCAGGCACGGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 269014 298 - 81552678 ATGAATCTTG---CTAAAGAC-AGGAGAGGAGCAGGGAGGCAGAAGGAAGGGAAGGCCGGG-GGGGCC-----------CCCGAGGTACTCACTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTGATCATTCCCGCTGCCGAAGATGGTGTCAGCCATGGCTGGGCGCACCCGGC-TGGGGGTGGGGAGTCACATCTGAGATGAAGGAGGGAAGAAGAAAGAGTGTGCATCATTGGCTGGGGTACAGATGG------------------------------------------------------CAGACAGGGTCTCTGTGC-----------------------------------CCTCA--------------G--GCCCCTCCACCCC--ATCTGCATGCGCTGT i nomLeu3.chr19 I 529 C 0 s rheMac3.chr16 183456 295 + 80904711 ATGAATCTTG---CTAAAGAC-AGGAGAAGAGCAGGGAGGCCGCAGGAAGCGAAGGCCTGG-GGGGCC-----------CCAGAGGTACTCACTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTGGTCATTCCCGCTGCCGAAGATGGTGTCGGCCATGGCTCGGAGCCCCCGGC-TGGGGGAGGGGAGTCACATCTGAGATGAAGGAGGGAAGAAGAAAGA--GTGCATCACTGGCTGGGGTACAGATGG------------------------------------------------------CAGACGGGGTCTCGATGC-----------------------------------AGTCA-----------------GCCCCTCCACCGC--ACCTCCATGCGTTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 195580 295 + 80997621 ATGAATCTTG---CTAAAGAC-AGGAGAAGAGCAGGGAGGCCGCAGGAAGCGAAGGCCTGG-GGGGCC-----------CCAGAGGTACTCACTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTGGTCATTCCCGCTGCCGAAGATGGTGTCGGCCATGGCTCGGAGCCCCCGGC-TGGGGGAGGGGAGTCACATCTGAGACGAAGGAGGGAAGAAGAAAGA--GTGCATCACTGGCTGGGGTACAGATGG------------------------------------------------------CAGACGGGGTCTCGATGC-----------------------------------AGTCA-----------------GCCCCTCCACCGC--ACCTCCATGCGTTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 180774 295 + 74645514 ATGAATCTTG---CTAAAGAC-AGGAGAAGAGCAGGGAGGCCGCAGGAAGCGAAGGCCTGG-GGGGCC-----------CCAGAGGTACTCACTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTGGTCATTCCCGCTGCCGAAGATGGTGTCGGCCATGGCTCGGAGCACccggc-tgggggaggggagtcaCATCTGAGatgaaggagggaagaagaaaga--gtgcATCACTGGCTGGGGTACAGATGG------------------------------------------------------CAGACGGGGTCTCTATGC-----------------------------------ACTCA-----------------GCCCCTCCACCGC--ACCTCCATGCGTTGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 171419 293 + 75148670 ATGAATCTTG---CTAAAGAC-AGGAGAGGAGCAGGGAGGCAGAAGAAAGCGAAGGCCTGG-GGGGCC-----------CCAGAGGTACTCACTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTGGTCATTCCCGCTGCCGAAGATGGTGTCGGCCATGGCTCGGAGCACCCGGC-TGGGGGAGGGGAGTCACATCTGAGATGAAGGAGGGAAGAAGAA--A--GTGCATCACTGGCTGGGGTACAGACAG------------------------------------------------------CAGACAGGGTCTCTATGC-----------------------------------ACTCA-----------------GCCCCTCCACCCC--ACCTCCATGCACCGT i chlSab2.chr16 C 0 I 115 s calJac3.chrUn_GL286409 989704 304 - 1291538 ATGCATCTTG---CTGCAGGC-AGGAGAGAAGCAGGGAGGCAGGATG-AGGGAAGCCCTGG-GG---------------CCCGAGGTACTCACTTGGCACGCAGGGCCAGCTGCCGATCGTTGGGGCAGACCCATTGGTCATTCCCACTGCTGAAGATGGTGTCAGCCAT-GCTCAGGGCACCCAGCGGGGGGGTGGGGAGTCACATCTGGGATGAGGAGAGGGAAAAGAAAGAGTGAGCATCACTGGCTGGGGTACGGACGG------------------------------------------------------CAGACAGGATCCCTGCAA-----------------------------------ACCCAGGCACGAGATGCTTG--GCCCTTCTACCC----GCTCCACACACTC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75910860 395 + 122082543 GCAAAACTTG---CAAAAGACTGGGAAGAGGGGAAGAGGGCAGCAGGTGGAGAGGGAGGGA-AGGGCCACTCCTGCAGGCCACAGATGCTTACTTGGCTCTCAGAGCAAGCTGCCGATCGTTGGGGCAAACCCACTGATCATTTCCACTGCTGAAGATGGTGTCAGCCATGACGGGGAGCA--CAGC-CCAGGGC-AGGAGTCACATCTGAG--GCAGGAGGACAAGGGAAGCA---CATGTTAGTGACTGGGGTGTTGACGGGAATCCCGATCCCTGCTGACCATTGATGCTACACTCTTTTTTTTAAGGtttttcgagacagggtttctctgtgtagccctggctgtagtagaccaggctgtccttgaactca--------------gaaatcctcctgcctctgcctcccaagtgctgg i mm10.chr11 I 1 I 13 s canFam3.chr9 15740634 295 - 61074082 TTGAGTCTTGCCCCTAAAAAA-GAAGGAATTGGGGAGAGGTAG--GGAAGGGAAGGCCGGGCAGTGCC-----------TTGGAGGTACTCACTTGGCTCGCAGGGCGAGCTGCCGATCGTTGGGGCAAACCCACTGGTCGTTCCCACTACCAAAGATGGTGTCAGCCATGGCTTGGAGTGCCCAGC-C-AGGACAGAGAGTCACATCTGAGGTG-AGAAGGGAAAAACAAAGA--GCACATCATCAGCTGGGGTGCAGATGG------------------------------------------------------CAGCCAGGGTCCCTCACG-----------------------------------CACCA-----------------GGCACTCCAGTGC--ATCCCCAAACCTGGC i canFam3.chr9 C 0 C 0 a score=476634.000000 s hg38.chr17_GL383563v3_alt 299122 151 + 375691 -CCCCACTGATGCCTGG-AATCTCACTGTGGGAACCATC-TCTCCAGCAAAACACTCTTCCCTCAAGGCTCCTC-TTCAGAAGGCT----CATGATTCTAGG-A-GGG-TGACCAGGTGGATCATGTGGCCGAGTGACAAGAGTGAAC-ATGACTGGC-----AGGGC s panTro4.chr17 272650 155 + 82630442 -CCCCACTGATGCCTGG-AATCTCACTGTGGGAACCACC-TCTCCAGCAAAACACTCTTCCCTCAAGGCTCCTC-TTCAGAAGGCTCATGCATGATTCTAGG-A-GGG-TGACCAGGTGGATCATGTGGCCGAGTGACAAGAGTGAAC-ATGACTGGC-----AGGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 153421 152 + 73212453 -CCCCACTGATGCCTGG-AATCTCACTGTGGGAACCATCTTCTCCAGCAAAACACTCTTCCCTCAAGTCTCCTC-TTCAGAAGGCT----CATGATTCTAGG-A-GGG-TGACCAGGTGGCTTGTGTGGCCGAGTGACAAGAGTGAAC-ATGACTGGC-----AGGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 269312 151 - 81552678 -CCCCACTGATGCCTGG-AACCTCACTGTGGGAACCATC-TCTCCAGCAAAACACTCTTCCCTCAAGGCTCCTC-TTCAGAAGGCT----CATGATTCTAGG-A-GGG-TGACCAGGTGGATCGTGTGGCCGAGTGACGAGAGTGAAC-ATGACTGGC-----AGGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 183751 145 + 80904711 -CCCCATGGATGCCTGG-AATCTCACTGTGGGAACCGTC-TCTCCAGCAAAAAACTGTT-CCTCAAGACTCCTC-TTCAGAAGGCT----CATGATTCTGGG-A-GGG-TGACCAGGTGGATCATGTGGCCGAGTGCCAAGAGTGAAC-GTGACTGGC---------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 195875 145 + 80997621 -CCCCATGGATGCCTGG-AATCTCACTGTGGGAACCGTC-TCTCCAGCAAAAAACTGTT-CCTCAAGACTCCTC-TTCAGAAGGCT----CATGATTCTGGG-A-GGG-TGACCAGGTGGATCATGTGGCCGAGTGCCAAGAGTGAAC-GTGACTGGC---------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 181069 150 + 74645514 -CCCCATGGATGCCTGG-AATCTCACTGTGCGAACCGTC-TCTCCAGCAAAACACTGTT-CCTCAAGACTCCTC-TTCAGAAGGCT----CATGATTCTGGG-A-GGG-TGACCAGGTGGATCATGTGGCCGAGTGCCAAGAGTGAAC-gtgactggccgggc----- i papAnu2.chr16 C 0 I 325 s chlSab2.chr16 171827 145 + 75148670 -CCCCACGGATGCCTGG-AATCTCACTGTGGGAACCGTC-TCTCCCGCAAAACACTGTC-CCCCAAGACTCCTC-TTCAGAAGGCT----CATGATTCTGGG-A-GGG-GGACCAGGTGGATCATGTGGCCGAGTGCCAAGAGTGAAC-GTGACTGGC---------- i chlSab2.chr16 I 115 I 1 s calJac3.chrUn_GL286409 990008 152 - 1291538 -TCCCACCAATGCCTGG-ACTCTCACTGTGAGAATCATC-TCTCGGGCAAACCACTGTTCCCTCAAGCCTCCTT-TTCAGAAATCT----CGTGGTTCTGGGAA-GGG-TGACCAGGTGGATCCTGTGGCTGAATGACCAGAGTGAAT-GTGACTGGC-----AGGAC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75911268 139 + 122082543 -caccaccactgcctggcGATGCTACACTCTTAACT----CCTCCAGCAAAAGCCTT---ACTCAGAGCTCCTT-TTCCAAAGGCT----CGGGATCTTGGG-ACAGG-TGGCTAGGTGCATCACATCGCTAAGTGACCAGAGTAGACAATGAC-------------- i mm10.chr11 I 13 C 0 s canFam3.chr9 15740929 143 - 61074082 CACCTGTGGATGCCTTG--------CCATCAGAAT-----CCTCCAACTAAATACTGTTCCCTCAAAGCTCCTCTTTCAAAAGGAT----CATAATTCTGGG-A-GGGTTAACTAGGTGGCTCACGTAGCTAAGTGACCAAATTGGAC-ATGACTGGC-----AGGAC i canFam3.chr9 C 0 C 0 a score=3276.000000 s hg38.chr17_GL383563v3_alt 299273 1 + 375691 A s panTro4.chr17 272805 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 153573 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 269463 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 183896 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 196020 1 + 80997621 A i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 990160 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75911407 1 + 122082543 A i mm10.chr11 C 0 C 0 s canFam3.chr9 15741072 1 - 61074082 A i canFam3.chr9 C 0 C 0 e chlSab2.chr16 171972 1 + 75148670 I e papAnu2.chr16 181219 325 + 74645514 I a score=1906391.000000 s hg38.chr17_GL383563v3_alt 299274 663 + 375691 TCAAAAGGTTAGAGTCAGAAA-GGAGAGAGGAGGCTCAC-CCTTAGCAGTTTTCAACTCAA--------CCCTGGAGGCCATCTGCTCCCTGCCCCCTCCCAGTACAGCAGGGGCCGAACTGAG--------------------------------------------------------------------------------------------CACGTCACCCAGCAGGAGGGGCTGGGCTGGGGGGTGATG--GCCAGACAG---GCT-GGGAAACCCTACTCCTTTCCC----------------------AAACCTGGGG-------------ACCT--------------------------------------G-GCTCTCCTTC------------CCAACAGACTCACACCGATGATCACAATGCCCTCGAGGGCAGGCAAGAGGGCAGGGGGTGGCAGCTACAGCCAGGATTGCCACCCAGCACCATGCCAAGG-------GGAGCCGTCCATAGACACTGCCATGAAAATGGCA-CC--TGGGGATCCCCCAGGGAGGTGGCCCTGCTCCAGGACCCCCTGAGGGCTTCACCTGTGCACTGTCTAGTGT-GCCGGCTTTCTCCCTGCCTCCCAGGACAGGATTG--TCTTTGGTGGTC-----TGAGGATGCCACGCGTGCATTCTGAAGGGAGTGTGGG-------------------------------ATGAGGCCGAGGGTAT----------------------CTGAATCCCAGagcaaggaggaggggctctcctgagcc---atccaca-----ctctcctggtctaatcccAGCTAGGCcagtggttctcaaacccagggcccctttacactcttaaaaaAGATCCAGGtt------------cgaaatccgtttga-------cacttcctca s panTro4.chr17 272806 669 + 82630442 TCAAAAGGTTACAGTCAGAAAGGGAGAGAGCAGGCTCAC-CCTTAGCAGTTTTCAACTCAG--------CCCCTGGAGCCATCTGCTCCCTGCCCCCTCTCAGTACAGCAGGGGCCGAACTGAG--------------------------------------------------------------------------------------------CACGTCACCCAGCAGGAGGGGCTGGGCCGGGGGGTGATG--GCCAGACAG---GCT-GGGAAACCCTACTCCTTTCCC----------------------AAACCTGGGG-------------ACCT--------------------------------------G-GCTCTCCTTC------------CCAACAGACTCACACCGATGATCACAATGCCCTCGAGGGCAGGCAAGAGGGCAGGGGGTGGCAGCTACAACCAGGATTGCCACCCAGCACCATGCCAAGG-------GGAGCCGTCCATAGACACCGCCATGAAAATGGCA-CC--TGGGGATCCCCCAGGGAGGTGGCCCTGCTCCAGGACCCCCTGAGGGCTTCACCTGTGCACTGTCTAGTGT-GCCGGCTTTCTCCTTGCCTCCCAGGACAGGATCA--TCTTTGGTGGTCTATTATGAGGATGCCACGCATGCATTCTGAAGGGAGTGTGGG-------------------------------ATGAGGCCGAGGGTAT----------------------CTCAATCCCAGAGCAAGGAGGAGGGGCTCTCCTGAGCC---ATCCACA-----CTCTGCTGGTCTAATCCCAGCTAGGCCAGTGGCTCTCAAACCCAAGACCCCTTTACACTCTTAAAAAAGATCCAGGtt------------cgaaatccgtttga-------cacttcctca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 153574 668 + 73212453 TCAAAGGGTTAGAGTCAGAAG-GGAGAGAGCAGGCACAC-CCTTAGCAGTTTTCAACTCAG--------CTCTGGAGGCCATCTGCCCCCTGCCCGCTCCCCGTACAGCAGGGGCCGAAGTGAG--------------------------------------------------------------------------------------------CACGTCACCCAGCAGGAGGGGCTGGGCCGGGGGGCGACG--GCCAGACAG---CCT-GGGAAACCCTACTCCTCTCCC----------------------AAACCTGGGG-------------ACCT--------------------------------------G-GCTCTCCTTC------------CCAACAGATTCACACCCATGATCACAATGCCCTCGAGGGCAGGCAAGAGGGCAGGGGGTGGCAGCTACAGCCAGGATTGCCACCCAGCACCATACCAAGG-------GGTGCCGTCCATAGACACCGCCATGAGCATGGCA-CC--TGGGGATCCCGCAGGGAGGTGACCCTGCTCCAGGACCCCCTGATGGCTTCACCTGTGCACTGTCTAGTGT-GCCGGCTTTCTCCTTGCCTCCAAGGACGGGATTG--TCTTTGGTGGTCTATTATGAGGATGCCACGTGTGCATTCTGAAGGGAGTGTGGG-------------------------------ATGAGGCCGAGGGTAT----------------------CTCAATCCCAGAGCAAGGAGGAGGGGCTCTCCGGAGCC---ATCCACA-----CTCTCCTGGTCTAATCCCAGCTAGGCcagtggttctcaaacccagggcccctttacactcttaaaaaAGATCCAGGtt------------cgaaatccgtttga-------cacttcctca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 269464 664 - 81552678 TCGAAGGGTTAGAGTCAGAAA-GGAGAGAGCAGGCACAC-CCTTAGCAGTTTTCAACTCAG--------CCCTGGAGGCCATCTGCTCCCTGCCCCCTCCCAGTACAGCAGGGG--------------------------------------------------------------------------------------------------------------CCAGCAGGAGGGGCTGGGCCAGAGGGTGATG--GCCAGACATCACCCT-GGGAAACCCTACTCCTCTCCC----------------------AAACCCAGGG-------------ACCT--------------------------------------G-GCTCTCCTTCCCGACAGATTCGCCAACAGATTCACACCGATGATCACAATGCCCTCGAGGGCAGGCAAGAGGGCA-GGGGTGGCAGCCACAGCCAGGACCGCCACCCAGCACCATGCCAAGG-------GGTGCCGTCCATAGACACCGCCACGAGCATGGCA-CC--GGGGGATCCCGCAGGGAGGCGACCCTGCTCCAGGACCCCC-GATGGCTTCACCTGTGCACTGTCGAGTGTGGCCGGCTTTCTCCTTGCCTCCAAGGACAGGATCG--TCTTTGGTGGTCTATTATGAGGATGCCACGCGTGCACTCTGAAGGGAGTGTGGG-------------------------------ATGAGGCTGAGGGTAT----------------------CTCAATCCCAGAGCAAGGCTGAGGGGTTCTCCTGAGCC---ATCCACA-----CGCTCCTGGTCTAATCCCAGCCAGGCCAGTGGTTCTCAAACCCAGGACCCCTTTACACTCTCAAAAAAGATCCAGGtt------------cgaaatccgtttga-------cacttcctca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 183897 732 + 80904711 TCAAAGGGTTAGACTCAGAAA-GGAGAGGGCAGGCACAC-CCTTAGCAGTTTTCACCTCAG--------CCCAGGAGGCCATCTGTTCCCTGCCCCCTCCCAGTACAGCAGGGGCCAAACTGAGCACGTCACCCAGCAGGAGGTACTGGGCTGGGGGGTGGTGGCCAGAGTAGAGCAGGGG-------------------------CTGACCCAACCACGTCACCCAGCAGGAGGGGCTGGGCTGAGGGGTGATG--GCCAGACAG---GCT---GAAACCCTACACCTCTCCC----------------------AAGCCTGGGG-------------ACCT--------------------------------------G-GCTCTCCTTC------------CCAACAGATTCACACCGATGGTCACAATGCCCTCGAGGGGAGGCAAGAGGGCAGGGGGTGGCAGCTACAGCCAGGATCGCCACCCGGCACCGTGCCAAGG-------GGTGCCGCCCATAGACACTGCCATGAGCATGGCA-TC--TGGGGATCCCGCAGGGAGGTGACCCTGCTCCAGGACCCCC-GATGG-GTCACCTGTGCACCGTCTAGTGTAGCCGGCTTCCTCCTTGCCTCCAAGGACAGGATTA--TCTTTGGTGATCTATCGTGAGGACGCCGCATGTGCATTCTGAAGGGAGAGTGGG-------------------------------ATGAGGCTGAGGGTAT----------------------CTCAATCCCAGAGCAAGAATGAGGGGCTCTCCTGAGTC---ATCCACA-----CTCCCCTGGTTGAATTCCAGCTGGGCcagcggttctcaaacccaggacccctttacacgcttaaaaaatatccaggtt------------tgaaatccatttgg-------cacttcctca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 196021 706 + 80997621 TCAAAGGGTTAGACTCAGAAA-GGAGAGGGCAGGCACAC-CCTTAGCAGTTTTCACCTCAG--------CCCAGGAGGCCATCTGTTCCCTGCCCCCTCCCAGTACAGCAGGGGCCAAACTGAGCACGTCACCCAGCAGGAGGTACTGGGCTGGGGGGTGATGGCCAGAGTAGAGCAGGGG-------------------------CTGACCCAACCACGTCACCCAGCAGGAGGGGCTGGGCTGAGGGGTGATG--GCCAGACAG---GCT---GAAACCCTACACCTCTCCC----------------------AAGCCTGGGG-------------ACCT--------------------------------------G-GCTCTCCTTC------------CCAACAGATTCACACCGATGGTCACAATGCCCTCGAGGGGAGGCAAGACGGCAGGGGGTGGCAGCTACAGCCAGGATCGCCACCCGGCACCGTGCCAAGG-------GGTGCCGCCCATAGACACTGCCATGAGCATGGCA-TC--TGGGGATCCCGCAGGGAGGTGACCCTGCTCCAGGACCCCC-GATGG-GTCACCTGTGCACCGTCTAGTGTAGCCGGCTTCCTCCTTGCCTCCAAGGACAGGATTA--TCTTTGGTGATCTATCGTGAGGACGCCGCACGTGCATTCTGAAGGGAGAGTGGG-------------------------------ATGAGGCTGAGGGTAT----------------------CTCAATCCCAGAGCAAGAATGAGGGGCTC----------------------------------TGAATTCCAGCTGGGCcagcggttctcaaacccaggacccctttacacgcttaaaaaatatccaggtt------------tgaaatccatttgg-------cacttcctca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 181544 732 + 74645514 TCAAAGGGTTAGACTCAGAAA-GGAGAGGGCAGGCACAC-CCTTAGCAGTTTTCAACTCAG--------CCCAGGAGGCCATCTgttccctgccccctcccagtACAGCAGGGGCCAAACTGAGCACGTCACCCAGCAGGAGGTACTGGGCT-------------------------GGGGGGTGATGGCCAGAGTAGAGCAGGGGCTGACCCGACCACGTCACCCagcaggaggggctgggctgAGGGGTGATG--GCCAGACAG---GCT---GAAACCCTACACCTCTCCC----------------------AAGCCTGGGG-------------ACCT--------------------------------------G-GCTCTCCTTC------------CCAACAGATTCACACCGATGGTCACAATGCCCTCGAGGGGAGGCAAGAGGGCAGGGGGTGGCAGCTACAGCCAGGATCGCCACCCGGCACCGTGCCAAGG-------GGTGCCGCCCATAGACACTGCCATGAGCATGGCA-TC--TGGGGATCCCGCAGGGAGGTGACCCTGCTCCAGGACCCCC-GATGG-GTCACCTGTGCACCGTCTAGTGTAGCCGGCTTCCTCCTTGCCTCCAAGGACAGGATTA--TCTTTGGTGATCTATCGTGAGGACGCCACACGTGCATTCTGAAGGGAGAGTGGG-------------------------------ATGAGGCTGAGGGTAT----------------------CTCAATCCCAGAGCAAGAATGAGGGGCTCTCCTGAGTC---ACCCACA-----CTCCCCTGGTCGAATTCCAGCTTGGCCAGCGGTTCTCAAACCCAGGACCCCTTTACGCTCTTAAAAACTATCCAGGTT------------TGAAATCCATTTGG-------Cccttcctca i papAnu2.chr16 I 325 C 0 s chlSab2.chr16 171973 665 + 75148670 TCAAAGGGTTAGAGTCAGAAA-GCAGAGGGCAGGCACAC-CCTTGGAAATTTTCAACCCAG--------CCCAGGAGGCCATCTGTTCCCTGCCCCCTCCCAGAACAGCAGGGGCCAAACTGAG--------------------------------------------------------------------------------------------CATGTCACCCAGCAGGAGGGGCCGGGCTGGGGGGTGATG--GCCAGACAG---GCT---GAAACCCTACACCTCTCCC----------------------AAGCCTGGGG-------------ACCT--------------------------------------G-GCTCTCCTTC------------CCAACAGATTCACACCGATGGTCACAATGCCCTCGAGGGGAGGCAAGAGGGCAGGGGGTGGCAGCTACAGCCAGGATCGCCACCCGGCACCGTGCCAAGG-------GGTGCCGCCCATAGACACTGCCATGAGCATGGCA-TC--TGGGGATCCCGCAGGGAGGTGACCCTGCTCCAGGACCCCC-GATGG-GTCATCTGTGCACTGTCTAGTGTAGCCGGCTTTCTCCTTGCCTCCAAGGACAGGATTA--TCTTTGGTGATCTATCATGAGGATGCCATGCGTGCATTCTGAAGGGAGAGTGGG-------------------------------ATGAGGCTGAGGGTAT----------------------CTCAACCCCAGAGCAAGAATGAGGGGCTCTCCTGAGTC---ATCCACA-----CTCCCCTGGTCGAATTCCAGCTGGGCcagcggttctcaaacccaggacccctttacactcttaaaaaatatccaggtt------------tgaaattcgtttgg-------cacttcctca i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 990161 645 - 1291538 CCAAAGCATCAGCATCAGAGA-TGAGAGAACAGACACAT-CCTTAGTAGTTTTCAACTCAGCTGGCCACCCCTGGAGGCCCCCTCCTCCCTGCCC-CTCCCAGTACAGCAGGGGCCACACCAAG--------------------------------------------------------------------------------------------CACATCACCCAGCAGGAGGG---------------------------CTA---CCT-GGGAAGCCCTACCCCACTCCC----------------------AAACCTGGGG-------------ACCC--------------------------------------G-GTGCTCCTTC------------CCAA-AGGTCCACACTGACAATCACAAAGCTCTCTAGGGCAGGGAAGATACTAGGTGTTGGCAGCTGCAGCCACAATCACCAGCCAGCACCGTGCCAAGT-------GGTGCTGTCCACAGACACTGTCATGAGCATGGCAGCC--TGAAGACCCCATAGGGAGGCAACCCTGCCCCAGAACCC---GACAGCTTCCCCCATGTACCGCCTGGCACAGCT-GCTTTCTCCTCGCCTCCAAGG-CAGGATCT--CCTTTGGTTCTCTGCTCTGAGGACACCACACATGCATTCCAGAGGGAGTGTGCG-------------------------------ATGGGGCTG-GGGTAT----------------------CTCAATGCCAGGGCAAGGATGAGGGGCTCTCCTGAGTC---ATCCACA-----CTCCCCGGGTCTAATCCCAGCTAGACcagtgcttctcaaactcaggacccctttacactcttaaaaagtatccaggtt------------caaaatccatttga-------cacttcctca i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75911408 672 + 122082543 TCAGAGGGTGAGAATCAGAAG-GGAGAGA--AGGCACCA-TCTCAGCAACTTTCAACTCAGCTGGCAAGCCCTGCAGAGCATCAGCT-TCTGCCCTTTCCCA-CACAGCC-CCACTGCCCTGAG--------------------------------------------------------------------------------------------AACATC--CCA--AAGAGAGAC--------------------ACAGGCAA---GCTCATGAGTCCCCTCAACCTCCCCAACCTTCATTGGACCAGAGTGGAAGCTTACAG-------------GCCT--------------------------------------GTGCTCTGCTCC------------GTAAGAGACCC-----------CAGGGTGTTCTCCAGAG--GGCAAG---GCATGGGGTGGCAG------CCAGTACCTCCACTAGGCACTTTA--AAAA-------GTCATCGTCCACA---------AGGGATAT-----CT--TGCAAACCCTGCAGGAAGG--AACCTTCTTTAGAACCT---GATGGCTCAACGTAAGTA--GTGCAGCTTAGCTGGCTTTCTGTGTGTTACTGAGCCAAGGGCTA--ACTCAGGCTGCCTATTACAAAGGCGCTGCTTGTGCCTCCtaaatggagtgcatgtgtgcgtgtgtgtgtgtgtgtgagtgtgtgcatgcgtgtgtgagtgt----------------------gtgcatgtgttgagaagaaaaagagact----tgggtcagtatgcaTAAGGATAGCCTTTGATTTCATCCAATCCAGTCCAGTGGATTGAAAATTCAGAGCCTCTTTATATTCTACAAAAGAATATTGATG------------GAGAAAgctggtgatgtggttcagtgattaa i mm10.chr11 C 0 C 0 s canFam3.chr9 15741073 778 - 61074082 TCACAA-GTCAGAAGCAGAAA-GAGGGGGGAAGAAGCACATCTCAGTAATCTTCAACTTGG----------CTGGTAGCCTCCTGACTTCTGCTCCTCCCAAGCACAGCCCCTACTGTACTGAG--------------------------------------------------------------------------------------------CACAGTGCTTAGCAGGAGGGGCTAGGTCCAGGGTGCACGCATCTAGACAA---CCCGGGGAACCCTTATACCACTCTC----------------------AAACCTGGGGGACCCATCGTGGCACCTCCAGGCCCATGGTGCAGCTAAAATTGGCCATCTTCATGG-GTTCTTCTCC------------CCAGCATGTTC-TGCTGGCCATCACAGTGCTCCCCAGAGCAGGAAGGAGGGTGGGGAGCAGCAGCTACAGCCAGGACTGCCACCCTGTACAACTGTAGGGGTACCCTGGCACAGTCCACCAAGACTACGATGAAGATGGTA-CCCTTGGGAATTCTGCAGGGAGCCAACCCTGCTTCAGAACTTCCTGTTGGTTTGACATGTACA--GTCTAGCTCAGCTGCCTTTCTCCTTGCTATCAAGGCTATGACCAGCTCTTGGATTATCTAGTATAAGGCTACTGCTCACGTATTCTGAAAGgagagagag----------------agagagagagagagagagagagagagagTGTTGGGGGGAGAAAAAAGGGGGAACTCAATCCCAGAGCAAAGATGAAAGCCTGCACTGAGTT---ATCCACA-----CTCCCCTGGTCCAATCCAATCTAGACCAATAGATCTCAAACACAGGAATCCTTCATACTCTTAAAAATTACTGAATTTATTTTAAATTACTGAAATTAGTCTGG-------CAGTGCCTTA i canFam3.chr9 C 0 I 201 a score=564949.000000 s hg38.chr17_GL383563v3_alt 299937 196 + 375691 aaatgttgaacacagacttaccatatgacccagaaactctactcctagttacacacccaagagtacccaaaacatacgtcctcaccaaaacctgta--------cacaaacgttcttagcagcactattcatgaccgcc-aaaagcagaaacaacgaaaatatccatcaactgatgaatgaggaaaatgtgctatatccatacga s panTro4.chr17 273475 197 + 82630442 aaatgttgaacacagacttaccatatgacccagaaactctactcctagttacacacccaagaataccaaaaccgtacgtcctcaccaaaagctgta--------cacaaacgttcttagcagcactattcatgaccgccaaaaagtagaaacaaccaaaatatccatcaactgatgaatgaggaaaatgtgctatatccatacaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 154242 197 + 73212453 aaatgttgaacacggacttaccatacgacccagaaactctactcctagttacacacccaagagtaccaaaaacatacgtcctcaccaaaaactgta--------cacaaacgttcttagcagcattattcataaccgccaaaaagtagaaacaaccaaaatacccatcaactgacgaatgagaaaaatgtactatatccatacaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 270128 197 - 81552678 aaatgttgaacacggacttaccatatgagccagaaactctactcctagttacacacccaagagtaccaaagacacgtgtcctcaccaaaacctgta--------cacaaacgttcttagcagcactattcacaacagccaaaaagcagaagcaaccaaaatatccatcaacggatgaatgaggaaaatgtgctatatccatacaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 184629 185 + 80904711 acatgttaaatacagatttaccatatgacccagaaactccgctcctggttacagacccaaga------------catgtcctcaccaaaacctgta--------cacaaatgttctcagcagcattattcacaacagccaaaaagtggaaacaaccaaaatatccaccgaccgatgaatgaggaaactgtgctatttccgtacaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 196727 185 + 80997621 acatgttaaatacagatttaccatatgacccagaaactccgctcctggttacagacccaaga------------catgtcctcaccgaaacctgta--------cacaaatgttctcagcagcattattcacaacagccaaaaagtggaaacaaccaaaatatccaccgaccgatgaatgaggaaactgtgctatttccgtacaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182276 185 + 74645514 aaatgttaaatacagatttaccatatgacccagaaactCTGCTCCTGGTTACAGACCCAAGA------------CATGTCCTCACCGAAACCTGTG--------CACAAATGTTctcagcagcattattcacaacagccaaaaagtggaaacaacgaAAATATCCACCGACCGATGAATGAGGAAAATGTGCTATTTCCGTACAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 172638 185 + 75148670 aaatgttaaatacggatttaccatatgacccagaaactctgctcctggttacagacccaaga------------catgtcctcaccgaaacctgta--------cacaaatgttctcagcagcattattcacaacagacaaaaagtagaaacaaccaaaatatccaccaaccgatgaatgaggaaaaggcgctatttccatacaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 990806 197 - 1291538 aaatgttgaacacagacttgtcatataacccagaaactctactcctaatcacatacacaagagtaccgaaaacacatgtcctcaccaaaacctgga--------cacagatgttcttaacagcatgattcataacagccaaaaagcagaaacaaccaaaatacccatcaactgatgaatgagaagaatgtgccgtatccatacaa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912080 171 + 122082543 aagcattggctgc---tcttccagaggacccag--gtttgattcccag---cacccacaagg------------tgg---tttacagacacctgtaattccagtcccaggggttct--ggtgccctcttc-tggtctcca-----tagggactgcataaatgcacatagatccac--ataagcaaaacacac-atatacatgaaa i mm10.chr11 C 0 I 197 s canFam3.chr9 15742052 188 - 61074082 aaatgttaaat--ggaattgccatatgacccagaaact--acttctaggtatatatgcaagagaagtaaaaa--catgcccacaccaaaacttgta--------tatggatgttcatagcagcattattcacaacaccc-aaaagtggaaataattcaaatgtctgccaactgataaatgggtatcatatggtgtatctatac-- i canFam3.chr9 I 201 C 0 a score=-9769.000000 s hg38.chr17_GL383563v3_alt 300133 29 + 375691 tgattattatttacaatgg---attatgattt s panTro4.chr17 273672 29 + 82630442 tgattattatttacaatgg---attattattt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 154439 32 + 73212453 tgattattattTACAATGGATTATTATTATTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 270325 15 - 81552678 ----tattctttacaatga------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 184814 3 + 80904711 ----------------tgg------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 196912 3 + 80997621 ----------------tgg------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182461 3 + 74645514 ----------------TGG------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 172823 3 + 75148670 ----------------tgg------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 991003 3 - 1291538 ----------------tgg------------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15742240 17 - 61074082 ------------acaatgg---aatattattt i canFam3.chr9 C 0 I 482 e mm10.chr11 75912251 197 + 122082543 I a score=14476.000000 s hg38.chr17_GL383563v3_alt 300162 71 + 375691 acaatgg---attattatttacaatggattattattatttacaatggagtatgatttacaatggattattattt s panTro4.chr17 273701 57 + 82630442 acaatggattattattatttacaatggattattatt-----------------atttacaatggattattattt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 154471 70 + 73212453 ATGACGATTAATTATTATTTACAATGGATTATTGTT---TACAATGGATTATTATTTACAAT-GATTATTATTT i ponAbe2.chr17 C 0 I 1703 s nomLeu3.chr19 270340 37 - 81552678 -----------------tttacactggattgttatt--------------------tacactggattattattt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 184817 24 + 80904711 ------------------------------attagt--------------------tacaagggattattattt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 196915 24 + 80997621 ------------------------------attagt--------------------tacaagggattattattt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182464 24 + 74645514 ------------------------------ATTATT--------------------TACAAGGGATTATTATTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 172826 24 + 75148670 ------------------------------gttatt--------------------tacaatggattattattt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 991006 10 - 1291538 ------------------------------aatatg--------------------aact-------------- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912251 197 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I a score=125501.000000 s hg38.chr17_GL383563v3_alt 300233 67 + 375691 ggccgtaaaaaggaatgaagtgctaataccagctacaacatggatgaatctttaaaacatcctaagt s panTro4.chr17 273758 67 + 82630442 ggccgtaaaaaggaatgaagtgctaataccagctacaacatggatgaatctttaaaacatcctaagt i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 270377 63 - 81552678 ggccataaaaaggaatgaagcgctaataccagctaaaacatggatgaatctttaaaacatcc----t i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 184841 67 + 80904711 ggccacaaaaaggaatgaggtactaacaccagctaaatcatggacgaacctttaaaacaacctaagt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 196939 67 + 80997621 ggccacaaaaaggaacgaggtactgacaccagctaaatcatggacgaacctttaaaacaacctaagt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182488 67 + 74645514 GGCCACAAAAAGGAATGGGGTACTAACACCAGCTAAATCATGGACAAACCTTTAAAACATCCGAAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 172850 67 + 75148670 ggccacaaaaaggaatgaggtgctaacaccagctaaatcatggacgaacctttaaaacatcctaagc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 991016 61 - 1291538 ggccataaaaaggaatgaagtgctcatatcagctgaaac-tggatgag-ctttaaaacatgc----t i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912251 197 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e ponAbe2.chr17 154541 1703 + 73212453 I a score=575638.000000 s hg38.chr17_GL383563v3_alt 300300 275 + 375691 aagaaaagccagtc----ataaaagaccacgtattgtatgattccgtt--tatacagtgtgtccagaataagcaaatctagagagacggaaggtgaggagtggttgtcaggggttgcaggaagaggggaacagactcccagtgggttcaggacttctttttggggtcgtaaaaatgttctg-gattagacagtggtgatggtcacac-atttcaagaatacactaaaaccactgaatcgcaccctttaaaagtgtgaattttatggcatgtgaattacaactT s panTro4.chr17 273825 275 + 82630442 aagaaaagccagtc----ataaaagaccacgtattgtatgattccgtt--tatacggtgtgtccagaataagcaaatctagagagacggaaggtgaggagtggttgtcaggggttgcaggaagagggaaacagactcccagtgggttcaggacttctttttggggtggtaaaaatgttctg-gattagacagtggtgatggtcacac-atttcgagaatacactaaaaccactgaatcgcaccctttaaaagtgtgaattttatggcatgtgaattacaactT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 270440 276 - 81552678 aagaaaagccagtc----ataaaagaccacgtcttgtatgattctgtc--tatatgatgtgtccagaataagcaaatctagagagatggaaggtgatgagtggttgtcagcggttgcgggaagaggggaacagactcccagtgggttcaggacttctttctggggtgataaaaatgttctgtaattagacagtggtgacggttacac-attttgtgaatacgctaaaaccactgaatcgcaccctttaaaagtgtgaatcttatggtatgtgaattacaactT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 184908 273 + 80904711 aagaaaagtcagtc----gtaaaagaccacgtactgtatgattccgtt--tatatgacgtgcccagaataagcgaatct---gagagggaaggtgatgaatggttatc-ggggctgcaggaaaaggggaacagactgccagtgggttcaggacttctttttggggtgataaaaatgttccgaaattagacagtggtgatggttacacaattttgtgaatatactaaaaccactgaactgcatcctttaaaagtgtgaattttatggtctatgaattacaactT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 197006 273 + 80997621 aagaaaagtcagtc----gtaaacgaccacgtactgtatgattccgtt--tatatgacgtgcccagaataagcgaatct---gagagggaaggtgatgaatggttatc-ggggctgcaggaaaaggggaacagactgccagtgggttcaggacttctttttggggtgataaaaatgttccggaattagacagtggtgatggttacacaattttgtgaatatactaaaaccactgaactgcatcctttaaaagtgtgaattttatggtctatgaattacaactT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182555 272 + 74645514 AAGAAAAGTCAGTC----GTAAAAGACCACGTACTGTATGATTCCGTT--TACATGATGTGCCCAGAATAAGCGAATCT---GAGAGGGAAGGTGATGAGTGGTTATC-GGGGCTGCAGGAAAA-GGGAACAGACTGCCAGTGGGTTCAGGacttctttttggggtgataaaaatgttccggaattagacagtggtgatggttacacaattttgtgaatatactaaaaccactgAACTGCATCCTTTAAAAGTGTGAATTTTATGGTCTATGAATTACAACTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 172917 272 + 75148670 aagaaaagtcagtc----gtaaaagaccacgtactgtatgattccgtt--tatatgatgcgcccagaacaagcgaacct---gagagggaaggtgatgagtggttatc-ggggctgcaggaaaa-gggaacagaatcccagtgggttcaggacttctttttggggtgataaaaatgttccggaattagacagtggtgatggttacacaattttgtgaatatactaaaaccacagaattgcatcctttaaaagtgtgaattttatggtctatgaattacaactT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 991077 270 - 1291538 aagaaaagccagtc----acaaaagaccatgaactgtgtgaatccatttatatatgacaggtccagaatca-caaatct--agaggcagaaagtgataagtggttgtt--ggattgccggaagagggaaagagaatgcccacgggctcaggacttctttttgggctgat-aaaatgtcctggcattagacagtggtga---ttacacaattctgtgaatatacaaaaaccactcaactgtacccttttaaagtgtgaatgttatggtctatgaattacaactT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912448 210 + 122082543 agaagaagccaagcttgtacagaagatcacgtatgatctggtgctgcc--tata-gagatgtccagaat-ggcaaagcc------acagaggtagactaatggccattaataggcacaggacgacagtgacag----ctaatggctttagggtttctttatgaactgatggaaatattctggaattagataggggtgatgCTAACAA-----------------------------------------------------------TATGTGGGTTCCAGCTC i mm10.chr11 I 197 I 175 e canFam3.chr9 15742257 482 - 61074082 I e ponAbe2.chr17 154541 1703 + 73212453 I a score=98686.000000 s hg38.chr17_GL383563v3_alt 300575 49 + 375691 CAGCACAAACACAGACCATGAAAAAAAAAATGAATTATAACTCATTCAC s panTro4.chr17 274100 49 + 82630442 CAGCACAAACACAGACCATGAAAAAAAAAATGAATTATAACTCATTCAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 270716 46 - 81552678 CAGCACAAATACAGACCATG---AAAAAAATGAATTATAAATCATTCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 185181 46 + 80904711 CAGCACCAATACAGACCACG---AAAAAAATGAATTATAACTCATTCAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 197279 46 + 80997621 CAGCACCAATACAGACCATG---AAAAAAATGAATTATAACTCATTCAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182827 46 + 74645514 CAGCACCAATACAGACCacg---aaaaaaatgaattataaccCATTcat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 173189 46 + 75148670 CAGCACCAACACAGACCACG---AAAAAAATGAATTATAACCCATTCAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 991347 49 - 1291538 CAGCATGAATACAGACCATGAAAATAAAAATGAATTACAACTCATTCAT i calJac3.chrUn_GL286409 C 0 I 620 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e ponAbe2.chr17 154541 1703 + 73212453 I a score=20396.000000 s hg38.chr17_GL383563v3_alt 300624 9 + 375691 Aggccagac s panTro4.chr17 274149 9 + 82630442 Aggccagac i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 270762 9 - 81552678 Aggccagac i nomLeu3.chr19 C 0 I 311 s rheMac3.chr16 185227 9 + 80904711 Aggctggac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 197325 9 + 80997621 Aggctggac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182873 9 + 74645514 aggctggac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 173235 9 + 75148670 Aggctggac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992016 9 - 1291538 Aggccagac i calJac3.chrUn_GL286409 I 620 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e ponAbe2.chr17 154541 1703 + 73212453 I a score=90863.000000 s hg38.chr17_GL383563v3_alt 300633 39 + 375691 atggtggctgaggcctgtaatcccagcactttgggaggc s panTro4.chr17 274158 39 + 82630442 atggtggctgaggcctgtaatcccagcactttgggaggc i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 271082 39 - 81552678 gtagtggctcaggcctgtaatcccagcactttgggaggc i nomLeu3.chr19 I 311 C 0 s rheMac3.chr16 185236 39 + 80904711 atggtggctcatacctgtaatcccagcactttgggaggc i rheMac3.chr16 C 0 I 1457 s macFas5.chr16 197334 39 + 80997621 atggtggctcatacctgtaatcccagcactttgggaggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182882 39 + 74645514 atggtggctcatacctgtaatcccagcactttgggaggc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 173244 39 + 75148670 atggtggctcatacctgtaatcccagcacttcgggaggc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992025 39 - 1291538 acagtggctcaggcctataatcccagcattttgggaggc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e ponAbe2.chr17 154541 1703 + 73212453 I a score=85543.000000 s hg38.chr17_GL383563v3_alt 300672 63 + 375691 caaggcaggaggattgcttgaggtcaggagttcaagaccagcctggccaatatggtgaaaccc s panTro4.chr17 274197 63 + 82630442 tgaagtaggcaggtcacttgagcccaggagttccagatcagcctgggcaacatggtgaaaccc i panTro4.chr17 C 0 I 1203 s nomLeu3.chr19 271121 63 - 81552678 caaggcgggaggattgcttgaggtcaggagatcaagaccagcctggccaatgtggtgaaaccc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 197373 63 + 80997621 tgaactgggcaggtcaccggagcccaggagttcgagatcagcctggggaacgtggtgaaaccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 182921 63 + 74645514 tgaactgggcaGGTCaccggagcccaggagttcgagatcagcctgggcaacgtggtgaaaccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 173283 63 + 75148670 tgaagtgggcaggtcacctgagcccaggagttcgagatcagcctgggcaacatggtgaaaccc i chlSab2.chr16 C 0 I 1476 s calJac3.chrUn_GL286409 992064 63 - 1291538 caaggtgggaggattgcttggggtcaggagttcaagaccagcctgaccaatgtggtcaaactc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e rheMac3.chr16 185275 1457 + 80904711 I e ponAbe2.chr17 154541 1703 + 73212453 I a score=31770.000000 s hg38.chr17_GL383563v3_alt 300735 65 + 375691 cgcctctactaaaaatacaaaaaaaattagctgggtgtggtggcgagtgcctgtaatcccagcta s nomLeu3.chr19 271184 64 - 81552678 cgcctctactaaaaatacaaaaaaa-ttagccgggcgtggtggcgcacgcctgtaatcccagcta i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 197436 59 + 80997621 tgtctcaacaaaaagaacaaaaa---ttagctgggcgtggt---gcatatctgtggtcccagcta i macFas5.chr16 C 0 I 15 s papAnu2.chr16 182984 59 + 74645514 tgtctcaacgaaaagaacaaaaa---ttagctgggcgtggt---gcatatctgtggtcccagcta i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992127 64 - 1291538 tgcctctattaaaaatagaaaagaa-ccagctgggcagggtgctgggcgcctgtaatcccagttg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e rheMac3.chr16 185275 1457 + 80904711 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=600.000000 s hg38.chr17_GL383563v3_alt 300800 1 + 375691 c s nomLeu3.chr19 271248 1 - 81552678 c i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 183043 1 + 74645514 c i papAnu2.chr16 C 0 I 18 s calJac3.chrUn_GL286409 992191 1 - 1291538 c i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e rheMac3.chr16 185275 1457 + 80904711 I e macFas5.chr16 197495 15 + 80997621 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=6558.000000 s hg38.chr17_GL383563v3_alt 300801 27 + 375691 tgaggaggctgaggcaggagaattgct s nomLeu3.chr19 271249 27 - 81552678 tcaggaagctgaggcaggagaattgct i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 992192 27 - 1291538 tcaggaggctgaggcaggagaatcact i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e papAnu2.chr16 183044 18 + 74645514 I e rheMac3.chr16 185275 1457 + 80904711 I e macFas5.chr16 197495 15 + 80997621 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=7400.000000 s hg38.chr17_GL383563v3_alt 300828 20 + 375691 tgaaccctggaggtggaggt s nomLeu3.chr19 271276 20 - 81552678 tgagcccaggaggcggaggt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 197510 20 + 80997621 taagcccaggaggtcgaggc i macFas5.chr16 I 15 C 0 s calJac3.chrUn_GL286409 992219 20 - 1291538 tgaacctgggaggcgaaggc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e papAnu2.chr16 183044 18 + 74645514 I e rheMac3.chr16 185275 1457 + 80904711 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=37526.000000 s hg38.chr17_GL383563v3_alt 300848 66 + 375691 tgcagtgagc--cgagatcaagccattgcactccagcctgggcaaaaagagcgaaactccgtctcaaa s nomLeu3.chr19 271296 66 - 81552678 tgcagtgaga--caagatcacgccattgcagtccagcctgggcaacaagagtgaaactctgtctcaaa i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 197530 67 + 80997621 tgcagggagccacacgactgcgccactgcactccagcctgggtgac-agagcgagactctctctcaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 183062 65 + 74645514 TGCAGGGAGC--CAcgacggcgccactgcactccagcctgggtgac-agagcgagactctctctcaaa i papAnu2.chr16 I 18 C 0 s calJac3.chrUn_GL286409 992239 66 - 1291538 tgcagtgagc--cgagatggaagcactgcactccagcctgggcaacaacagctagactcagtccaaaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75912658 175 + 122082543 I e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e rheMac3.chr16 185275 1457 + 80904711 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=910.000000 s hg38.chr17_GL383563v3_alt 300914 1 + 375691 a s nomLeu3.chr19 271362 1 - 81552678 a i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 197597 1 + 80997621 a i macFas5.chr16 C 0 I 1279 s papAnu2.chr16 183127 1 + 74645514 a i papAnu2.chr16 C 0 C 0 s mm10.chr11 75912833 1 + 122082543 A i mm10.chr11 I 175 C 0 e canFam3.chr9 15742257 482 - 61074082 I e calJac3.chrUn_GL286409 992305 0 - 1291538 C e chlSab2.chr16 173346 1476 + 75148670 I e rheMac3.chr16 185275 1457 + 80904711 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=-2648.000000 s hg38.chr17_GL383563v3_alt 300915 2 + 375691 a---------------a s nomLeu3.chr19 271363 17 - 81552678 acaaacaaacaaacaaa i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 183128 2 + 74645514 ---------------aa i papAnu2.chr16 C 0 I 2489 s calJac3.chrUn_GL286409 992305 2 - 1291538 ---------------aa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912834 2 + 122082543 ---------------CA i mm10.chr11 C 0 C 0 e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e rheMac3.chr16 185275 1457 + 80904711 I e macFas5.chr16 197598 1279 + 80997621 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=264.000000 s hg38.chr17_GL383563v3_alt 300917 7 + 375691 TATATAG s nomLeu3.chr19 271380 7 - 81552678 caaacaa i nomLeu3.chr19 C 0 I 3 s calJac3.chrUn_GL286409 992307 2 - 1291538 -----aa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912836 7 + 122082543 CATACGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e papAnu2.chr16 183130 2489 + 74645514 I e rheMac3.chr16 185275 1457 + 80904711 I e macFas5.chr16 197598 1279 + 80997621 I e ponAbe2.chr17 154541 1703 + 73212453 I e panTro4.chr17 274260 1203 + 82630442 I a score=30081.000000 s hg38.chr17_GL383563v3_alt 300924 58 + 375691 ATATACATATattcttgagaactccaaaatacatgggctatgaccattgctagttacc s ponAbe2.chr17 156244 58 + 73212453 atatatatatattCttgagaactccaaaatacatgggctatgaccattaatagttacc i ponAbe2.chr17 I 1703 C 0 s nomLeu3.chr19 271390 58 - 81552678 ATATAtatatattcttgagaactccaaaatacaggggctatgatcattgatagttacc i nomLeu3.chr19 I 3 C 0 s calJac3.chrUn_GL286409 992309 50 - 1291538 --------agattcttgaggactccaaaatacgtgggctatgaccattgatagtcatc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912843 55 + 122082543 TGAGAAAGACAATTGGGAGCATTCCAAAATATATGAGTTATAGCTATTGATATTT--- i mm10.chr11 C 0 C 0 e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e papAnu2.chr16 183130 2489 + 74645514 I e rheMac3.chr16 185275 1457 + 80904711 I e macFas5.chr16 197598 1279 + 80997621 I e panTro4.chr17 274260 1203 + 82630442 I a score=19237.000000 s hg38.chr17_GL383563v3_alt 300982 49 + 375691 acactagaaattaaaactgagaaaatctttaaaatgttgttaattcatt s ponAbe2.chr17 156302 49 + 73212453 atactagaaattaaaactgagaaaatctttaaaatgttgttaattcatt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 271448 49 - 81552678 gtactagaaattaaaactgagaaaatctttaaaatgctgttaattcatt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 198877 30 + 80997621 accctagaacttaaagt----ataatttttaaaa--------------- i macFas5.chr16 I 1279 C 0 s calJac3.chrUn_GL286409 992359 48 - 1291538 atact-gaaattaaaactgagaaaatctttaaaattttgttaattcact i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912898 26 + 122082543 --------------TGCTGAGA-AATCTAAAAACCCCCATT-------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15742257 482 - 61074082 I e chlSab2.chr16 173346 1476 + 75148670 I e papAnu2.chr16 183130 2489 + 74645514 I e rheMac3.chr16 185275 1457 + 80904711 I e panTro4.chr17 274260 1203 + 82630442 I a score=29021.000000 s hg38.chr17_GL383563v3_alt 301031 31 + 375691 aaaaataataaacccattagacgttcacata s ponAbe2.chr17 156351 30 + 73212453 aaaaa-aataaacccattagacattcacata i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 271497 31 - 81552678 aaaaataatatacccgttagacgttcacata i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 198907 20 + 80997621 ---------aaaccctttagacgtgcacg-- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 174822 31 + 75148670 aaaaataataaaccctttagatgttcacatg i chlSab2.chr16 I 1476 C 0 s calJac3.chrUn_GL286409 992407 31 - 1291538 aaaaatgatacacccattagaagatcacata i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912924 31 + 122082543 ACAGatactaggcctattaggtattcacata i mm10.chr11 C 0 C 0 e canFam3.chr9 15742257 482 - 61074082 I e papAnu2.chr16 183130 2489 + 74645514 I e rheMac3.chr16 185275 1457 + 80904711 I e panTro4.chr17 274260 1203 + 82630442 I a score=26890.000000 s hg38.chr17_GL383563v3_alt 301062 13 + 375691 atttacatatttt s ponAbe2.chr17 156381 13 + 73212453 atttacatatttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 271528 13 - 81552678 atttacatatttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 186732 13 + 80904711 atttacatatttt i rheMac3.chr16 I 1457 C 0 s macFas5.chr16 198927 13 + 80997621 atttacatatttt i macFas5.chr16 C 0 C 0 s chlSab2.chr16 174853 13 + 75148670 atttacatatttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992438 13 - 1291538 atttacagcttat i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912955 13 + 122082543 atttatatttttt i mm10.chr11 C 0 C 0 e canFam3.chr9 15742257 482 - 61074082 I e papAnu2.chr16 183130 2489 + 74645514 I e panTro4.chr17 274260 1203 + 82630442 I a score=431995.000000 s hg38.chr17_GL383563v3_alt 301075 235 + 375691 atgaaaaactacac----tta-------caaagcaattagacaaat--------gacactg-ttttacatttttacaactctttttaatgtttgacttcacaaaaaa-----cagctggaccttcatatctgatttttcattcacgcatttgtgg-caggttgtttcgctgaagtccttgaaggacatccagaccctcacaaatacgtatgatggctgaaaagaggaggact-tttt--tta----ctt-tcca-ga-aattgtaaatatt s ponAbe2.chr17 156394 235 + 73212453 atgaaaaactacac----tta-------aaaagcaattagacaaat--------gacactg-ttttacatttttagaactctttttaatgtttggcttcacaaaaaa-----cagctggaccttcatatctgatttttcattcacgcatttgtga-caggttgtttcgctgaagtccttgaaggacatccagaccctcacaaatatgtatgatggctgaaaagaggaggact-tttt--tta----ctt-tcca-ga-aattgtaaatatt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 271541 235 - 81552678 atgaaaaaccgcac----tta-------aaaagcaattagacaaat--------gagattg-ttttacatttttacaactctttttaatgtttggcttcacaaaaaa-----cagctggaccttcatatctgattcttccttcacgcatttgtga-caggttgtttcgctgaagtccttgaaggacacccagaccctcacaaatacgtatgacggctgagaagaggaggact-tttt--tta----ctt-tcca-ga-aattgtaaatatt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 186745 237 + 80904711 atgaaaaactacac----tta-------aaaagcaattagacaaat---------acattg-ttttacatttttacaactgtttttaatgtttggcttcacaaaaaaaa---cagcgggacattcatatctgattcttcactcacacatttgtga-caggtggtttcactgaagtccatgaaggacatccagaccctcacaaacgtgcacgatggctgaaaagagaagcactgtttt--tta----ctt-tcca-ga-aattgtaaatatt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 198940 237 + 80997621 atgaaaaactacac----tta-------aaaagcaattagacaaat---------acattg-ttttacatttttacaactgtttttaatgtttggcttcacaaaaaaaa---cagcgggacattcatatctgattcttcactcacacatttgtga-caggtggtttcactgaagtccatgaaggacatccagaccctcacaaacgtgcacgatggcttaaaagaggagcactgtttt--tta----ctt-tcca-ga-aattgtaaatatt i macFas5.chr16 C 0 C 0 s chlSab2.chr16 174866 240 + 75148670 acgaaaaactacac----tta-------aaaagcaattagacaaat---------acattg-ttttacatttttacaactgtttttaatgtttggcttcacaaaaaaaaaaccagcgggacattcatatctgattcttcactcacacatttgtga-caggtggtttcactgaagtccatgaagggcatccagaccctcacaaatgtgtgtgacggctgaaaagaggaggactggttt--tca----ctt-tcca-ga-aattgtaaatact i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992451 234 - 1291538 g-aaaaaactacac----tta-------aaaa-caattagacaaat--------gacattg-ttttacatttttacaactctttttaatgtttggcttcacaatagaa----cggctggatattcacatgtgactttgcattccagtgtttgcga-tgggttg-ttcgttgaag-caatccaggatatccagaccctcacaaacatgtatgatggctgaggaaaggaggcctttttt--tta----ctt-tccagga-aattgtaaatatt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75912968 242 + 122082543 atgagaaaa-acacgtgtttt-------caaaacaa--agacaatgtgaggcccgggattgtttttatgattttgcaatttgctttgg-----gagttaactgaaga-----cagctgggcgttcttgtctgacttttctttcg-acctttg-ga-gatgctgttccagtgaa-tacatggaaggggtccaggctctcacggatgtggaggatggatggaaggcggaggagtattctaatag----cttgccca-gataatggtgtgtgtt i mm10.chr11 C 0 C 0 s canFam3.chr9 15742739 249 - 61074082 ATaaaaagctatat----tttccagaacaaaagcaactaatgaaaa----taacagctatg-tatcacattttcaaaaatctgtgtaatgtttagtttaacaaaagt-----cagctggatgttcatatctgatttcttgttcaatcttttgtgattatgcggttttgttaaagtgcatgaaggacatctagactctcacaaatatgt---actcctggaaaaaggaggagt-attt--tcacagtctt-tcca-gttaattgtggatatt i canFam3.chr9 I 482 C 0 e papAnu2.chr16 183130 2489 + 74645514 I e panTro4.chr17 274260 1203 + 82630442 I a score=225718.000000 s hg38.chr17_GL383563v3_alt 301310 71 + 375691 tttctttgatattgcacccaaactcaacagatggtaatttcttaaagattagttcaaatgtggcatctgaa s panTro4.chr17 275463 71 + 82630442 tttctttgatattgcacccaaactcaacagatggtaatttcttaaagattagttcaaatgtggcatctgaa i panTro4.chr17 I 1203 C 0 s ponAbe2.chr17 156629 71 + 73212453 tttctttgatattgcacccaaactcaacagatggtaatttcttaaagattagttccaatgtggcatctgaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 271776 71 - 81552678 tttctttgatattgcacccaaactcaacagatggtaattttttaaagattagttcaaatgtggcatctgaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 186982 71 + 80904711 tttctttgatattgcacccaaactcaacaaatggtagtttcttaaagattagtttcaatgcggcatctgaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 199177 71 + 80997621 tttctttgatattgcacccaaactcaacaaatggtagtttcttaaagattagtttcaatgcggcatctgaa i macFas5.chr16 C 0 C 0 s chlSab2.chr16 175106 71 + 75148670 gttctttgacattgcacccaaactcaccaaatggtagcttcttaaagattagtttcaacgtggcacctgaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992685 71 - 1291538 tttctttgatattgtaccaaaactctatagatattaatttcttaaacattagttccagcatggcatctgaa i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75913210 63 + 122082543 tttc--------tgcaccaaaactcaacagatggcactatcttaaaaactagttccagcacagcttctgaa i mm10.chr11 C 0 C 0 s canFam3.chr9 15742988 71 - 61074082 cttctttcatactgtaccagaattcaacagatggtactttcttaaagattagttctaatgtggcatctgaa i canFam3.chr9 C 0 C 0 e papAnu2.chr16 183130 2489 + 74645514 I a score=564101.000000 s hg38.chr17_GL383563v3_alt 301381 232 + 375691 accacatcaatgaacttctccttttctgtacatttgtgacaggataaaacccagagtcctatgactattcttatggaaacacttttga-cctgtggatctccgga-gggtgttgggggac----------------ccccagagaggcctgggcccagcttggagaactgctTTTCTCGGCCAGTGCCACCCATTTCTATGATGACCAGCA-GAGGTAACATGCAGACCGCCTCCGCCTGA-CCACACA--GGG s panTro4.chr17 275534 233 + 82630442 accacatcagtgaacttctccttttctgtacatttgtgagaggataaaacccagagtcctattactattcttatggaaacacttttga-cctgtggatctccagaagggtgttgggggac----------------ccccagagaggccagggcccagcttggagaattgctTTTCTCGGCCAGTGCCACCCATTTCCATGATGACCAGCA-GAGGTAACATGCAGACCACCTCCACCTGA-CCACACA--GGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 156700 234 + 73212453 accacatcaatgaacttctccttttctgtacatttgtgagaggataaaacccagagtcccattactattcttatgaaaacatttttgaccctgtggatctctggaagggtgttgggggat----------------ccccagagaggcctgggcccagcttggagaactgctTTTCTCGGCCAGTGCCACCCATTTCCATAATGACCAGCA-GAGGTAACGTGCAGACCGCCACCACCTGA-CCACACA--GGG i ponAbe2.chr17 C 0 I 83 s nomLeu3.chr19 271847 229 - 81552678 accacatcagtgaactt---cttttctgtacatttgtgagaggat-aaacccagagtcccattactattcttatgaaaacacttctgaccctgtgggtctccgggagggtgttgggggac----------------ccccagagaggcctggg-ccagcttggagaactgctTTTCTAGGCCAGTGCCACCCATTTCCATGATGACCAGCA-GGGGCCACATGCAGACCGCCTCCACCTGA-CCACACA--GGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187053 211 + 80904711 accacatcaatgaacttctccttttctgtacatttgtgagaggataaaaccc--ggtcccattactcttcttatgaaaaaacttctgaccctgtggatctccggaagggagttgggggac----------------ccccagagaggc-----cccagctcagagaactgctTTTCTAGGCCAGGGCCACCGGTTGCCCTGACG--------------ATGCGCCGACCGCCACCACCTGA-CCACACG----- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 199248 211 + 80997621 accacatcaatgaacttctccttttctgtacatttgtgagaggataaaaccc--ggtcccattactcttcttatgaaaaaacttctgaccctgtggatctccggaagggagttgggggac----------------ccccagagaggc-----cccagctcagagaactgctTTTCTAGGCCAGGGCCACCGGTTGCCCTGACG--------------ACGCGCCGACCGCCACCACCTGA-CCACACG----- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 185619 211 + 74645514 accACATCAATGAACTTCTCCTTTTCTGTACATTTGTGAGAGGATAAAACCC--GGTCCCATTACTCTTCTTATGAAAACACTTCTGACCCTGTGGATCTCCGGAAGGGAGTTGGGGGAC----------------CCCCAGAGAGGC-----CCCAGCTCAGAGAACTGCTTTTCTAGGCCAGGGCCACCCGTTTCCCTGATG--------------ACGCGCCGACTGCCACCACCTGA-CCACACG----- i papAnu2.chr16 I 2489 C 0 s chlSab2.chr16 175177 216 + 75148670 accacatctatgaacttctcctttcttgtacattTGTGAAAGGATAAAACCC--GGTCCCATTACTCTTCTTACGAACACACTTCTGACCCTGTGGATCTCTGGAAGGCAGCTGGGGGA------------------CCCAGAGAGGCCTGGGCCCAGCTCGGAGAACTGCTTTTCTAGGCCGGGGCCACCCGTTTCCCTGAGG--------------ACGCGCCGACCGCCACCACCTGA-CCACACGGG--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992756 205 - 1291538 accacatcaatgaacttctcCTTTT------ATTTGTGAGAGGATGAAACAA-GAGTCCTATTCTTCTTCTTATGAAAACACTTTTGACCCTGTGG-TCTCTGGAGGGGCATTGAGG-------------------------------------CCAGCTTTGAGAACCGCCTTTCTAGGCCAGTGTTAGCCGTTTCCAACACAACCAGCA-GGCACAGTGGGCAGACCGCCAGTACCTGG-CCATAAG--GGG i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75913273 205 + 122082543 gccacatctgagtactttccAGTTTCCatgtgtgtgaaagaggccaagaggc------------ttagactgtggaaaacagttttgattttggagatctctgaggg-----------------------------tctcagggatcccTGAGTCATGCTTAAGAAA---CTCTTCCGGACCAATGTGGCCCATGTCCATGATGACCACCAGGGGGCAGTGTGTGGGCCGGAGCTAACTGG-CCATGCT--G-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15743059 245 - 61074082 accatactaatgaacttatccttttctgtatattTG--AGAGGATAGGATGCAGGAttttattatta---ttatgaaaatagttttgaccttgtggatttcctgaaaggtgttggagatacccccCCCTCCCCCCGCCCCAGGGATCCCTGGA-TCAGTTT-GAGACCTACTGTGCCAGACCAAGGTCACCGATTTTTATAATGACCAGCAGGGGGCAGCGTGTTGACAGTagccaactgatccacaca--gag i canFam3.chr9 C 0 C 0 a score=466244.000000 s hg38.chr17_GL383563v3_alt 301613 222 + 375691 -TCCAGGCCACAACCTTAACCACACTGGTCGCTCT---ACCCC-ATG---CACATGTCCAGGCACCTGCTCTTCCAGATCAGACCTGACCCTCCC-CAGTGAGCTGCC--TCAGCAAAGAGACCTGGGCAGCCCCAGACCCCAAACAGCCAAGCGTGGAAATCCCATGGCCGGGCCCAGATC------------------------ACCCAGGACCTCCTCAGAT--GGAGGCTCAATCTTCTCccagatgaggctaat s panTro4.chr17 275767 223 + 82630442 -TCCAGGCCACGACCTTAACCACACTGGTCCCTCT---ACCCCCATG---GACACGTCCAGGCACCTGCTCTTCCAGATCAGACCTGACCCTCCC-CAGTGGGCTGCC--TCAGCAAAGAGACCTGGGCAGCCCCAGACCCCAAACGGCCAAGCGTGGAAATCCCATGGCCAGGCCCAGATC------------------------ACCCAGGACCTcctcagat--gtaggctcaatcttctcccagatgaggctaat i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 272076 222 - 81552678 -TCCAGGCCACGACCTGAACCACACTGGTCCCTCT---ACGCC-ACG---GACACCTCCAGGCACCTGCTCTTCCAGATCAGACCTGACCCTCCC-CAGTGGGCTGCC--TCAGCAAAGAGACCTGGACAGGCCCAGACCCCAAATAGCCAAGTGTGGAAACCCCATGGCCAGGCCCAGATC------------------------GCCTGGGACCTcctcagat--gtaggttcaatcttctcccagacgaggctaat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187264 196 + 80904711 --------------------------GGTCCCTCT---ACCCC-AGG---GACACGTCCAGGCACCTGCTCTTCCAGATCAGACCTGACCCTCCC-CAGTGGGCTGCC--TCGGCAAAGAGACTTGGACAGCCCCAGGGCCCAAATAGCCAAATGTGGAAACCCCATGGCCAGGCCCAGATC------------------------ACCCGGGACC-ccccagat--gtaggctccatcttctccccgatgaggctaat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 199459 196 + 80997621 --------------------------GGTCCCTCT---ACCCC-AGG---GACACGTCCAGGCACCTGCTCTTCCAGATCAGACCTGACCCTCCC-CAGTGGGCTGCC--TCGGCAAAGAGACCTGGACAGCCCCAGGCCCCAAATAGCCAAATGTGGAAACCCCATGGCCAGGCCCAGATC------------------------ACCCGGGACC-CCCCAGAT--GTAGGCTCCATCTTCTCCCCGATGAGGCTAAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 185830 196 + 74645514 --------------------------GGTCCCTCT---ACCCC-AGG---GACACGTCCAGGCACCTGCTCTTCCAGATCAGACCTGACCCTCCC-CAGTGGGCTGCC--TCGGCAAAGAGACCTGGACAGCCCCAGGCCCCAAATAGCCAAATGTGGAAACCCCATGGCCAGGCCCAGATC------------------------ACCCGGGACC-CCCCAGAT--GTAGGCTCCATCTTCTCCCCGATGAGGCTAAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 175393 221 + 75148670 -TCCAGGCCACGACCTCAACCACACTGGTCCCTCT---ACCCC-AGG---GACACGTCCAGGCACCTGCTCTTCCAGATCAGACCTGACCCTCCC-CAGTGGGCTGCC--TCAGCAAAGAGACCTGGGCAGCCCCAGACCCCAAATAGCCAAATGTGGAAACCCCATGGCCAGGCCCAGGTC------------------------ACCCGGGACC-ccccagat--gtaggctccatcttctccccgatgaggctaac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 992962 227 - 1291538 -CTCAGGCCACCACCTCTACCACAC-GGTCCCTCC---ACCCA---------------------CCTGCTCTTCCAGATTAGACCCGACACTCCC-CAGGGGGCTGCC--TCGGGGATGGGACCCTGGCAGCCCCAGGCCCCAAATAGCCAAGTGTGTAAACCCCACGGCCAGGCCCAGACCTGGGGAGGCCTGAGGTGTC-CAATCACCAGGACCTCCTCAGAG--GCAGGCTCAATCTCCTCCTGAATGAGGCTGAT i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75913478 175 + 122082543 -TCCAAGCCCA---------------GACCCCACTGTCATCTC-ACA---GGTCCATCCAGGGAGCTGAGCTTCCCAGCTGAACTTGACATTCCCACCATGGTCCACACGTTGGTAAAGAACC----------------CCCAACCAGCCAGGCGCAGAGGCTCTGTTGGCAAGCCAGGAAC-------------------------CTCTGTACC-----------------------TTCTCCCAAAGGATGCTAAT i mm10.chr11 C 0 I 1250 s canFam3.chr9 15743304 221 - 61074082 accaaacccatgaccttgactgcaGTGGTCTCTCT---ATCCC-GTGTGTAGTACATCCAAGCACCTGCTC--------------------TCCT-CTGTGGGCCACC--TTGG-AGAGAGCCCTGGGCACATCCAGACCCTAAAGAGCCACGTGTGGAGACCCCATGGCCAGGCCTGGCAC----------TAGGATGCCACCATCCCAAAAGCCTcctcaaatcgaaagtcttgaccttctcccaagtaaggctaac i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 156934 83 + 73212453 I a score=459452.000000 s hg38.chr17_GL383563v3_alt 301835 190 + 375691 ggacaagcaaggaaag-acag-gtcaaaaatgataccgtcctcaaacaactttaaatcagtgcccca-tcccagccttt-agagcactatggtttgctttgc-----tttttaaaaacttcagttatcttg-------tgcagtcacactgctccacatgggtgtacaaagcattattcttttcaaagtaaacacta-a-aatatact s panTro4.chr17 275990 190 + 82630442 ggacaagcaaggaaag-acag-gtcaaaaatgacaccgtcctcaaacaactttaaatcagtgcccca-tcccagccttt-agagcactatggtttgctttgc-----tttttaaaaacttcagttatcttg-------tgcagtcacactgctccacatgggtgtgcaaagcattattctgttcaaagtaaacatta-a-aatatact i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 272298 191 - 81552678 ggacaagcaaggaaag-acagagtcaaaaatgacaccgtcctcaaacaactttaactcagtgcccca-tcccagccttt-agagcactatggtttgctttgc-----ttttcaaaaacttcagttatcttg-------tgcagtcacactgctccacgtgggtgtgcaaagcgttattctgttcaaagtaaacatta-a-aatatact i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187460 201 + 80904711 ggacaagcaaggaaag-acagggtcaaaagtgacacagtcctcagacaactttaaaccagtgcccca-tcccagccttt-agagcactacggtttgctttgctttgttttttaaaaacttcggttatcttgtactt--tgcagccacaccgccccacacgggtgtggaaagcactattctgttcagagtaaacattt-a-aaTACACT i rheMac3.chr16 C 0 I 2 s macFas5.chr16 199655 201 + 80997621 GGACAAGCAAGGAAAg-acagggtcaaaagtgacacagtcctcagacaactttaaaccagtgcccca-tcccagccttt-agagcactacggtttgctttgctttgttttttaaaaacttcggttatcttgtactt--tgcagccacaccgccccacacgggtgtggaaagcactattctgttcagagtaaacattt-a-aaTACACT i macFas5.chr16 C 0 I 2 s papAnu2.chr16 186026 201 + 74645514 GGACAAGCAAGGAAAG-ACAGGGTCAAAAGTGACACAGTCCTCAGACAACTTTAAACCAGTGCCCCA-TCCCAGCCTTT-AGAGCACTAcggtttgctttgctttgttttttaaaaacttcggTTATCTTGTACTT--TGCAGTCACACCACCCTACATGGGTGTGGAAAGCACTATTCTGTTCAGAGTAAACATTT-A-AATACACT i papAnu2.chr16 C 0 I 2 s chlSab2.chr16 175614 201 + 75148670 agacaagcaaggaaag-gcagggtcaaaagtgacacagtcctcagacaactttaaaccagtgcccca-tcccagccttt-agagcactacggtttgctttgctttattttctaaaaacttcagttatcttgtactt--tgcagccacaccaccccacacgggtgtggaaagcactattctgttcagagtaaacattt-a-aatacact i chlSab2.chr16 C 0 I 22 s calJac3.chrUn_GL286409 993189 200 - 1291538 GGGCGAGCAAGGAAAG-ACAAGGTCAGGCATGGCACACTCCTCAAACAACTTTAAGCAGG---CCTC-TCTCAGCCTTTCAGTGCACAATGCTTTGCTTTGCTTTGtttttttaaatcttcagttatcttgtgcat--agcagtcacaccattccatatgggtgtgaaaagcattattctgttcaaaataaacatttaa-aatatact i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15743525 198 - 61074082 atatgatccaggaaaacagagagtcaaaa-tgacacactcatcaaacaagtgcaaaccagcatctcacttccagccttc-agtgctctatggtttgttttgc--tgttttccagaatct---gttatcttgtgaatagcacaatcacactg--ccaggtgggtgtgaaaagcattactctattccaagtaaacgttt-agaacatact i canFam3.chr9 C 0 C 0 e mm10.chr11 75913653 1250 + 122082543 I e ponAbe2.chr17 156934 83 + 73212453 I a score=11479.000000 s hg38.chr17_GL383563v3_alt 302025 8 + 375691 acaGCCCA s panTro4.chr17 276180 8 + 82630442 acaggcca i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 272489 8 - 81552678 gcaggcca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187663 8 + 80904711 ACAggctg i rheMac3.chr16 I 2 C 0 s macFas5.chr16 199858 8 + 80997621 ACAggctg i macFas5.chr16 I 2 C 0 s papAnu2.chr16 186229 8 + 74645514 ACAGGCtg i papAnu2.chr16 I 2 C 0 s calJac3.chrUn_GL286409 993389 8 - 1291538 acaggcca i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15743723 8 - 61074082 ataattca i canFam3.chr9 C 0 I 1352 e mm10.chr11 75913653 1250 + 122082543 I e chlSab2.chr16 175815 22 + 75148670 I e ponAbe2.chr17 156934 83 + 73212453 I a score=5459.000000 s hg38.chr17_GL383563v3_alt 302033 5 + 375691 CAcgg s panTro4.chr17 276188 5 + 82630442 cacgg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 272497 5 - 81552678 cacgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187671 5 + 80904711 aacgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 199866 5 + 80997621 aacgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 186237 5 + 74645514 aacgt i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 993397 5 - 1291538 aacgt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75913653 1250 + 122082543 I e canFam3.chr9 15743731 1352 - 61074082 I e chlSab2.chr16 175815 22 + 75148670 I e ponAbe2.chr17 156934 83 + 73212453 I a score=21896.000000 s hg38.chr17_GL383563v3_alt 302038 8 + 375691 ggtggctc s panTro4.chr17 276193 8 + 82630442 ggtggctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 157017 8 + 73212453 ggtggctc i ponAbe2.chr17 I 83 C 0 s nomLeu3.chr19 272502 8 - 81552678 ggtggctc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187676 8 + 80904711 ggtggctc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 199871 8 + 80997621 ggtggctc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 186242 8 + 74645514 ggtggctc i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 993402 8 - 1291538 ggtggctc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75913653 1250 + 122082543 I e canFam3.chr9 15743731 1352 - 61074082 I e chlSab2.chr16 175815 22 + 75148670 I a score=731555.000000 s hg38.chr17_GL383563v3_alt 302046 263 + 375691 acgcctgtaatctcagcacttcgggagactcaggtgggtggatcccttgagctcaggagtttgagaccagcctgggcaacatggagaaaccccgtctccactaaaaatgcaaaaattagccaggcgtgatggcgcgcacctgtaatcccagctattcgggaggccgaggcaggataa----tcgcttgaacctggggggtggaggttgcagtgagctgagatcgcgccactacactccagcctgggtgacagagcgagacataatct s panTro4.chr17 276201 263 + 82630442 acgcctgtaatctcagcacttcgggagactcaggtgggtggatcccttgagctcaggagtttgagaccagcctgggcaacatggagaaaccccgtctccactaaaaatacaaaaattagccaggcgtgatggcgcgcacctgtaatcccagctattcgggaggccaaggcaggagaa----tcacttgaacctgggaggtggacgttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagagcaagactctatct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 157025 263 + 73212453 acgcctgtaatctcagcactttgggagactcaggtgggtggatcacttgagctcaggagtttcagaccagcctgggcaacatggagaaaccccatctccactaaaaatacaaaaattagccaggcgtgatggcgcgcacctgtaatcccagctattcgggaagctgaggcaggagaa----tcacttgaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcaagactctatct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 272510 267 - 81552678 atgcctgtaatctcagcactttgggagacttaggcaggcaggtcacttgagctcaggagtttgagaccagcctgggcaacacggagaaaccccatctccaataaaaatacaaaaattagccaggcgtgatggcacgcacctgtaataccagctattcgggaagctgaggcaggagaatcgctcgcttgaacgtgggaggtggaggttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagagcaagactctatct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187684 262 + 80904711 acgcctggaatcccagcactttgggagaccaaggtgggcaggtcacctgagctcaggagtttgagaccagcctgggcaacatggagaaacaccgtctccactaaaaatacaaaaattagccaggtgtggtggcaggtgcctgtaatcccagttattcaggaggctgaggcaggagaa----tcacttgaacctggaaggtggaggttgcagtgagccgagatcacgccactgcactccagcctgggcaacaaaacgagactccatc- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 199879 263 + 80997621 acgcctggaatcccagcactttgggagaccaaggtgggcaggtcacctgagctcaggagtttgagaccagcctgggcaacatggagaaacaccgtctccactaaaaatacaaaaattagccaggtgtggtggcaggtgcctgtaatcccagttattcaggaggctgaggcaggagaa----tcgcttgaacctggaaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaacaaagcgagactccatca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 186250 262 + 74645514 acgcctggaatcccagcactttgggagaccgaggtgggcaggtcacctgagctcaggagtttgagaccagcctgggcaacatggagaaaccccatctccactaaaaatacaaaaatcagccaggcgtggtggcgggcacctttaatcccagttattcaggaggctgaggcaggagaa----tcgcttgaacctggaaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaacaaagcgagactccatc- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 175837 262 + 75148670 acgcctggtatcccagcactttgggaggccgaggtgggcaggtcacctgagctcaggagtttgagaccagcctgggcaatgtggagaaaccccatctccactaaaaatacaaaaatcagccaggcgtggtggcgggcgcctgtaatcccagttattcaggaggctgaggcaggagaa----tcgcttgaaccgggaaggtggaggttgcagtgagctgacactgcgccactgcgttccagcctgggcaacaaagcgagactccatc- i chlSab2.chr16 I 22 C 0 s calJac3.chrUn_GL286409 993410 262 - 1291538 atgcctgtaatcccaacactttgggaggctgaggtgggtgcgtcacttgagctcaggagtttgagaccagcctgggcaacatggtgaatccccgtctccactaaaaatacaaaaattatctgggtgtggttgtgcatgcctgtagtcccagctacgtgggaggctgaggcaggagaa----ttgcttgaacccaggaggtggaagctgcagtgagccaagataatgctgctgcactccagcct-agcgacagactgagactccaaat i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75913653 1250 + 122082543 I e canFam3.chr9 15743731 1352 - 61074082 I a score=-2464.000000 s hg38.chr17_GL383563v3_alt 302309 2 + 375691 ca s panTro4.chr17 276464 1 + 82630442 c- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 157288 2 + 73212453 ca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 272777 2 - 81552678 ca i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 200142 2 + 80997621 aa i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 993672 1 - 1291538 c- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75913653 1250 + 122082543 I e canFam3.chr9 15743731 1352 - 61074082 I e chlSab2.chr16 176099 0 + 75148670 C e papAnu2.chr16 186512 0 + 74645514 C e rheMac3.chr16 187946 0 + 80904711 C a score=876889.000000 s hg38.chr17_GL383563v3_alt 302311 414 + 375691 aa-------------aaaaaaaaaaagaTCTGTGAaattt---------tggct-tttatgtaaacttactagaagtccaggaacaagtcaactgtcttcct-gagcctcagtttccccatcggcaCCCAACAGAGCT---TGA----GACAGGCCGGAGCAACCGCCTCCTGCAATTTCAATGCCTGATTTGGACCCTGCTGAGTTACATGagggaggcgagggaggcaagcgagggaggcaaggga---ggcaggcagccagcaggca-ggcTGCTGGCTGCTCCCACGTGGGAGGTGGGAACTGAG-CCCTCCCCAGCCCAGTCCACAGGACAGAGAGGAGGAGGCCGCG--AGAACTGCTTCCTACATGTCCCCACCCCTCTCACTGCTGTAGCTTCAGGGCAGAAGAGCCACAGAGCCAAATGCTGCAGAGATGAAGGGAGACGGAA s panTro4.chr17 276465 395 + 82630442 ---------------aaaaaaaaaaagatctgtgaaattt---------tggct-tttATGTAAacttactagaagtccaggaactagtcaactgtcttcct-gagcctcagtttccccatgggtaCCCAACAGAGCT---TGA----GACAGGCCGGAGCAACCGCCTCCTGCAATTTCAATGCCTGATTTGGACCCTGCTGAGTTACATGAGGGAGGCGAGGGAGGCAAGCGAGGGAGGCAAGGG------------------AGGCA-GGCTGCTGGCTGCTCCCACGTGGGAGGTGGGAACTGAGCCCCTCCCCAGCCCAGTCCACAGGACAGA---GAGGAGGCCGCG--ACAACTGCTTCCTCCATGTCCCCACCCCTCTCACTGCTATAGCTTCAGGTCAGAGGAGCTACAGAGCCAAATGCTGCAGAGATCAAGGGAGACGGAA i panTro4.chr17 C 0 M 897 s ponAbe2.chr17 157290 394 + 73212453 aa------aaaaaagaaagaaaaaaaaaTCTGTGAaattt---------tggct-tttatgtaaacttactagaagtccaggaacaagtcaactgtcttcct-gagcctcagtttccccactggtaCCCAACAGAGCT--GTGA----GACAGGCCGGAGCAACCGCCTCGTGCAATGTCAATGCCTGATTTGGACCCTGCTGAGTTACACGAGGGAGGCGAGGGAGCCAGGC--AGCAGGCAGCGG----------------GCAGGGA-GGCTGCTGGCTGCTCCCACCTGGGAGGTGGGAACTGAGCCCCTCCCCAGCCCAGTCGACAGGGCAGAGAGGAGGAGGCCACA--AGAACTGCATCCTCCATGTCCCCACCCTTCTCACTGCTGTAGCTTCAGGGTAGAGGAGCCACAGAGCCAAATGCTGCACAGAC-------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 272779 390 - 81552678 aaaa--aaaaaaaaaaaaaaaaaaaagatctgtgaaattt---------tggct-tttATGTAAacttactagaagtccaggaacaagtcaactgtcttcct-gagcctcagtttccccatcggtaCCCAACAGAGCT--GTGA----GACAGGCCGGAGCAACCGCCTCGTGCAATTTCAATGCCTGATTTGGACCCTGCTGAGTCACATgagggaggcaagggaggcaggc--agcaggc-----------------------aggga-ggCTGCTGGCTGCTCCCACGTGGAAGGTGGGAACTGAGCCCCTCCCCAGCCCAGTCCACAGGACAGGGAGGACGAGGCCACA--AGAACTGCGTCCTCCATGTCCCCACCCTTCTCACTGCTGTAGCTTCAGG-CAGAGGAGCCACAGAGCCAAGTGCTGCAGAGAT-------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 187946 338 + 80904711 ------aaaaaaaaaaaaaaaagagagaTCTGTGAAAATT---------TGGCT-TTTATGTGAACTTACTAGAAGTCCAGGAACAAGTCAGCTCTCTTCCC-GTGCCTCAGTT----------TACCCGGCAGAGCT--GTCG----GACA-----GAGCGACTGCCTCGGGTAATTTCAACGCCTGATTCTGACGCTGCTGAGTTACATgagggaggcgagggaggcga----gggaggcg----------------------aggga--------ggcTGCTCCCACATGGGAGGTGGGAACTGAGCCCCTCCCCAGCCCAGTCCGCAGGACAGA-----GGCGGCCACA--AGAACTGTATCCTCCATGTCTCCACCCTTCTCACTGCTGTAGCTTCTGGGCAAAGGAACCAC----------------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 200144 354 + 80997621 aaaaaaaaaaaaaaaaaaaaaagagaGATCTGTGAAAATT---------TGGCT-TTTATGTGAActtactagaagtccaggaacaagtcaactctcttcgg-gtgcctcagtttcctcgtcggtaCCCAACAGAGCT--GTCG----GACA-----GAGCGACCGCCTCGGGTAATTTCAACGCCTGATTCTGACGCTGCTGAGTTACATgagggaggcgagggaggcga----gggaggcg----------------------aggga--------ggcTGCTCCCACATGGGAGGTGGGAACTGAGCCCCTCCCCAGCCCAGTCCACAGGACAGA-----GGCGGCCACA--AGAACTGTATCCTCCATGTCTCCACCCTTCTCACTGCTGTAGCTTCTGGGCAAAGGAACCAC----------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 186512 355 + 74645514 ---------tcaaaaaaaaaaaaagagatctgtGAAAATT---------TGGCT-TTTATGTGAACTTACTAGAAGTCCAGGAACAAGTCAACTCTCttccc-gtgcctcagtttcctcgtcggTACCCAACAGAGCT--GTTG----GACA-----GAGCGACCGCCTCGGGTAATTTCAACGCCTGATTCTGACCCTGCTGAGTTACAcgagggaggcgagagaggcga----gggaggcg----------------------aggga-ggcTGCTGGCTGCTCCCACGTGGGAGGTGGGAACggagcccctccccagcccagtcCACAGGACAGA--GGCGGCGGCCACA--AGAACTGTATCCTCCGTGTCCCCACCCTTCTCACTGCTGTAGCTTCCGGGCAAAGGAACCAC----------------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 176099 350 + 75148670 -------tcaaaaaaaaaaaaaaagagaTCTGTGAAAATT---------TGGCT-TTTATGTAAacttactagaagtccaggaacaagtcaactgtcttccc-gagcctcagtttcctcgtcggtaCCCAACAGAGCT--GTCGGCCAGACA-----GAGCGACCGCCTCGGGTAATTTCAACGCCTGATTCTGACCCTGCTGAGTTACACAagggaggcgagggagacga----gggagtcg----------------------aggga--------ggcTGCT-CCACGTGGGAGGTGGGAACGGAGCCCCTCCCCAGCCCAGTCCACAGGACAGA-----GGCGGCCACA--ACAACTGTATCCTCCATGTCCCCACCCTTCTCACTGCTGTAGCTTCAGGGCAAAGGAACCAC----------------------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 993673 356 - 1291538 --------aaaacaacaacaaaaaaagaTCTGTGAAAATT---------TAGCT-CCTCCGTAAACTTACTAACAGTCCAAGAACAAGCCAACTGTC-TCCT-GGGCCTCAGGTTCCTCACTGGCACCCCACAGAGCT--GTCA----GACAGGTTGGATCGACTGCCTCGTGCAATTCCATAGCCTGGTTCTGACTCTGCTGAGTTATGTGAGGAC------------------------------------------------AGGGA-GGCTGCCGGCTGCTCTCACATGGGAGGCGGAAACTGAACCCCT-CCCAGCCCAGTCCACAGGACAGACAGGAAGAGGCCACA--GGAACTGCGTCCCCCATGTCCCCGCCTTTCTCACTGCTGTAGCTTCAGGACAGAGGTACCACAGAGCCACGAGCTGCAG------------------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75914903 288 + 122082543 ------------caaacaaaagaacaaaCCCCCTAAAACCCAAAACCAATGGTTGTTTGTGCAAatttactaaatgtccagg-acaagtcagcaacctccct-ggggctctgtttcgccacttgtaCCCGA-----------GG----GACA-----GA-----CGCCCTGTAT-----------CTTATTCC--CACTGCTGAGATGCATGGA---------------------AGGAGTTA----------------------TGACAGGGCTGCTGGCAGGGCCTGGGTGGAAGG------CTAAGGGTTTCTCCAGGCTA-----CAGGATGAAGAGATGGGACCCACGGCAGGACAG-------------------------ACATCTATAGT-------CAAATAAAATACTAGGGGGGA-------------------------- i mm10.chr11 I 1250 C 0 s canFam3.chr9 15745083 343 - 61074082 -------------AAGAGAGAAAAGAGATCCGAGAGAGTC---------TGGCT-TTTATGCAGACCTACTGGAAGGCCAGGAACCGGTCAGTTATCTTCCTCGGGCCTCAGTTTTCTCATAGGTCCCCAAAAAGGCTGAGATG----GACAGGCTGGAGATACTGCCCTGAGCAATCTGAGCTGTCAACCCT--CCCTGCCAATCTGCGC-AGGGAGGCAAGGGGGTGGAGGTGGGGAGACGGGAGACCGGACCTGGGG-----CAGGA-GGCTGGTGGCTGCTCCAACCTGGGAGGTGGGAAGTGAGCCCCACCCTAGCCTAGTCCCCTGGGCGGG-----------AGCA--AGAA-GGCATCCCTCTATCCCCCACCC--------------------AGACTGAGGAG--------------------------------------- i canFam3.chr9 I 1352 C 0 a score=1117352.000000 s hg38.chr17_GL383563v3_alt 302725 510 + 375691 AGAGCCAAATGCTGCAGAGATCAAGGGAGACGGAAGGATGTCGCCTCCAGAGCTGGGGCCACGGGCAGCGCCAGGGCAGGTTCATCACTGATGGCAAGTCTGTGGCTGACCACGTTCACAGGGGTGGCCCTGAGCAAAGGTCGGACATGAGGACCCAGGAGAATTCAGGCCCCGGCTCTGGGACGGCTGTG-CACCCCCACCCTGGCCGTGGCTGGCACCTCAGAAGGCACAGCTGTCCTTC--ACTCGCACGGAGCAACCTCGGGACAGATGGTGGGAGAGGAAGGGCAACTCGAGGAGGCACATTTTAGGAAACTGCCCACGGAGCCAGTTTCGATTCTCCAAACCTCGTCAGCATGCAGAGGCT------------------------------------------------CCCTGACTCGGCAGCAAG-GAGGGCCTCATCAGCCGACCCCCATG-------CCCGGC-------ACCCCCTTCACCAGTGGGTAAACTATGCTCGCCACCACTCAGCACTCACCTCTT---------GGGCTC------AGAGGGCAGAAAG----------TCTGACCC-TTCTCTCTTAAAAGC s ponAbe2.chr17 157684 509 + 73212453 ---------------------CAAGGGAGATGAAAGGATGTCGCCTCCAGAGCTGGGGCCACGGGCAGCGTCAGGGCAGGTTCATCACTGATGGCAAGTCTGTGACTGACCACGTTCACAGGGGTGGCCCCGAGCAAAGGTCGGACATGAGAACCCAGGAGAATTCAGGCCCTGGCTCTGGGACGGCTGTG-CACCCCCACCCTGGCTGTGGCTGGCACCTCAGAAGGCACAGCTGTCCTTC--ACTCACA----------------------------GAGGAAGGGCAACTCGAGGAGGCACATTTTAGGAAACTGCCCATGGAGCCAGCTTCGATTCTCCAAACCTCATCAGCCTGCACTGGCTGCCAGCTTCGATTCTCCAAACCTCGTCAGCCTGCGCTAGCTGCCAGCTCCCTGACTCGGCAGCAAG-GAGGGCCTCAGCAGCCGACCCCCATG-------CCCGGC-------ACCCCCTTCACCAGTGGGTAAACTATGCTCACCACCACTCAGCACTCACCTCTT---------GGGCTC------AGAGGGCAGGGAG----------TCTGACCC-TTCTCTCTTAAGAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273169 499 - 81552678 ---------------------CAAGGGAGACGGAAGGACGTCGCCTCCAGAGCTGTGGCCACGGGCAGCGTCAGGGCAGGTTCATCGTTGATGGCAAGTCTGTGGCTGACCACATTCAC-GGGGTGGCCCCGAGCAAAGGTT-GACATGAGAACCCAGGAGAATTCAGGCCCCGGCTCTGGGACGGCTGTG-CACCCCCACCCTGGCCATGGCTGGCACCTCAGAAGGCACAGCTGTCCTTC--ACTTGCAGGGAGCAACCTCGGGACAGATGGTGGGAGAGGAAGGGCAACTCGAGGAGGCACATTTTGGGAAACTGCCCATGGAGCCAGCTTCGATTCTCCAAACCTCGTCAGCCTGCACTGGCT-----------------------------------------GCCAGCTCCCTGACTCGGCAGCAAG-GA-GGCCTCACCAGCCGACCCCCAGGCCCGGCACCCGGC-------ACCCCCTTCACCAGTGGGTAAACCATACTCACCACCACTCAGCACTCACCTCTT---------GGGCTC------AGAGGGCAGGGAG----------TCTG-CCC-TTCTCTCTTAAGAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 188284 512 + 80904711 AGAGCCAAGCGCTGCAGAGGTCAAGGGAGACGGAAGGATGTTGCCTCCAGGGCTGGGGCCACGGGCAGTGGCAGGGCAGGTTCATCGTCGATGGCAGGTCTGTGGCTGACCACGCTCACAGGGGTGGCCCCGAGCAGAGGTCGGACATGAGAACCCAGGAGAATTCGGGCCCTGGCTCTGGGACGGCTGTG-CACCCCCACCCT-GCCGTGGCTGGCACCTCCGAAGGCACAGCTGTCCTTC--ACTCGTACAGAGCCACCTTGGGACAGATGGTGCGAGAAGAACGGCAACTCGAGGAGGCACATTTTGGGAAACTGCCCACGGAGCCAGCTTCGATTCTCCAAACCTCTTCAGCCTGCACTGGCT-----------------------------------------GCCAGCTCCCTGACTCG---GCACG-GAGGGCCTCACCAGCCAATCCCCATG-------CCCGGC-------ACCCCCTTCACCAGGGGGTAAACTGTACTCACCACCACCCAGCGCTCACCTCCC---------GGGCTC--GGATGGATGGCGGGGAG----------TCTGACCC-TTCTCTCGTA----- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 200498 512 + 80997621 AGAGCCAAGCGCTGCAGAGGTCAAGGGAGACGGAAGGATGTTGCCTCCAGGGCTGGGGCCACGGGCACTGGCAGGGCAAGTTCATCGTCGATGGCAAGTCTGTGGCTGACCACGCTCACAGGGGTGGCCCCGAGCAGAGGTCGGACATGAGAACCCAGGAGAATTCGGGCCCTGGCTCTGGGACGGCTGTG-CACCCCCACCCT-GCCGTGGCTGGCACCTCCGAAGGCACAGCTGTCCTTC--ACTCGTACAGAGCAACCTTGGGACAGATGGTGCGAGAAGAACGGCAACTCGAGGAGGCACATTTTGGGAAACTGCCCACGGAGCCAGCTTCGATTCTCCAAACCTCTTCAGCCTGCACTGGCT-----------------------------------------GCCAGCTCCCTGACTCG---GCACG-GAGGGCCTCACCAGCCAATCCCCATG-------CCCGGC-------ACCCCCTTCACCAGGGGGTAAACTGTACTCACCACCACCCAGCGCTCACCTCCC---------GGGCTC--GGATGGATGGCGGGGAG----------TCTGACCC-TTCTCTCTTA----- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 186867 520 + 74645514 AGAGCCAAATGCTGCAGAGGTCAAGGGAGACGGAAGGATGTCGCCTCCAGGGCTGGGGCCACGGGCAGTGGCAGGGCAGGTTCATCGTCGATGGCAAGTCTGTGGCTGACCACACTCACAGGGGTGGCCCCGAGCAGAGGTCGGACATGAGAACCCAGGAGAATTCAGGCCCCGGCTCCGGGACGGCTGTG-CACCCCCACCCTGGCCGTGGCTGGCACCTCCGAAGGCACAGCTGTCCTTC--ACTCGTACAGAGCAACCTTGGGACAGATGGCGCGAGAGGAACGGCAACTCGAGGAGGCACATTTTAGGAAACTGCCCACGGAGTCAGCTTCGATTCTCCAAACCTCTTCAGCCTGCACTGGCT-----------------------------------------GCCAGCTCCCTGACTCG---GCACG-GAGGGCCTCACCAGCCAATCCCCATGCCCAGCACCCGGC-------ACCCTCTTCACCAGGGGGTCAACTGTGCTCACCACCACCCAGCGCTCACCTCCC---------GGGCTC--GGATGGATGGCAGGGAG----------TCTGACCC-TTCTCTCTTA----- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 176449 517 + 75148670 AGAGCCAAGCGCTGCAGAGGTCAAGGGAGACGGAAGGATGTCGCCTCCAGGGCTGGGGCCACGGACAGTGGCAGGGCAGGTTCATCGTCGATGGCAAGTCTGTGGCTGACCACGCTCACAGGGGTGGCCCCGAGCAAAGTTCGGACATGAGAACCCAGGAGAATTCGGGCCCCGGCTCCGGGACGGCTGTG-CACCCCCACCCTGGCCGTGGCTGGCACCTCAGAAGGCACAGCTGTCCTTC--ACCCGTACAGAGCAACCTCGGGACAGACGGTGCGAGAGGAAGGGCAACTCGAGGAGGCACATTTTAGGAAACTGCCCACACAGCCAGCTTCGATTCTCCAAACCTCTTCAGCCTGCACTGGCT-----------------------------------------GCCAGCTCCCTGACTCG---GCACG-GAGGGCCTCACCAGCCGATCCCCATC-CCGGCACCCGGC-------ACCCCCTTCACC--GGGGTAAACTGTGCTCACCACCACCCAGCGCTCACCTCCC---------GGGCTC--GGATGGATGGCAGGGAG----------TCTGACCC-TTCTCTCTTG----- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994029 460 - 1291538 ---------------AGAGGTCAAGGGAGGTGGAAGGGTGTCGCCTCCGGGGCAGGGGCCGTGGGCAATGGCAGGGCAGGTTCATCACGAATGGCAAGTTTGTAGCTAA-------------------CCTGAGCAAAGGTCAGAGATGAGAACCT-GGATGATTCAAGCCCCGGCTCTGGGACGGCCATGATAACCTCACCCTGGCCGTGGCTGGCACCCCAGAAGGCACAGCTGTCCTTC--ACTCGCACAGAGCAA-CTCGGGACTGAGGGTG-GAGAGGAAGGGAGACTCGA-GAGGCATGTTTTAGGAACATG----------------CGGTTCTCCAAAACTCTTCAGCCTG-ACTGGCT-----------------------------------------ACCAGCTCCCCGACTCGGCAGCAGG-GAGGGCCTCCCCAGCTGACCCCCTGG-------CCCGGC-------ACCCCCTTTACCCATGGGTAAAATGTGCTC-CCACCACCCAGCACTCACCT------------GGGCTC------AGAGGGCAGGGAG----------TCTGGCCCATTCTCTCTTAAGAGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75915191 456 + 122082543 ------------------GATCAGGAGAGATGGAGGACTGTCATTTCCAGGGCTTGGAATCATGGCACCGACTGGGCAGGGACATT-TGGATGGTAAATCCACAGCTGA--GTATCCACAGAGAT-GCTCAGAATGAAGGTCAGAGCCAAGAACACAGG-------------------------GGTTGTG-GCTCCCAACAGAAGCTGTGGCTGGCACCTCTGAAAGCACAGCTGTCCATCCTCTCCACACAGAGCAGCCTCAGGACAGATGG------------GGGACATCAAGGAGACCCATTTTAGGAACCTG-CCACAGAGCCAGCTTGGGTTTGCCAAACCTCTTTGGGCTTAGCTGGCG-----------------------------------------GCCATCTCCCTGACTTGGCAGCTGGTTAGAGCCTCACCA--TGCCACTCATT-------TCC--C-------ACCTAAGTGTCCCTCAGTGAAATTGTATATA-CACCACCCAACATACCTGCCCT---------GGTCCC------CATTGAGGGAGAG---------CTACAGCCC-ACACATCTTAAgagt i mm10.chr11 C 0 I 287 s canFam3.chr9 15745426 448 - 61074082 -------------GCGGAGGTCAA-------------------CTCCCAGGCCTGGGGCTGTGAACACTGGCTGGCCGGGT-CTTCAATGATGCTAAGATCCCGGCTGAGCGTGTCCACAGGGGTAGCTCGGGG-----------------------AGAGAACTGGGGCTTCTGCCCAGGC-------TG-CACC-------------TAACACACGTCTCCTAAGGCACACTTGTCCTCC--ACCCACACAGAGCAGCCTCGGGACAGATGGTGAGAG-GGAAGGGCAGCTCCAGGAGCCACATTTTAAGAA-CTGCCAACAAAGGCAGCGTAGGTTCTCCAAATCTCTTCAGTCTGAACC---------------------------------------------ACCAGCTTCCGGACTCT-------------------CCAGCCAAGCCCCATT-------CCCGGCTTCCTTAACCCTCTTCATCCAGAACCACTGTGTGCTCAC--ACACCCTGGGCTGGGCCCCCCTCCATTGGGGACTCTGGGAAGAGGGCCAGGGAGGCCCCCTTCCCCAGACCTGTGCCCTCTTACGAGC i canFam3.chr9 C 0 C 0 e panTro4.chr17 276860 897 + 82630442 M a score=390725.000000 s hg38.chr17_GL383563v3_alt 303235 188 + 375691 AGGGTCCTGAAAAC-TCCAGAGAGCAGTGCCCTGTGCATTAAACACAGACTGCGCCCTTGTACTCAGGTATGACCATTTGTCCTGGACAAAAATTAAACTGATGAGGGAACAAAATAGGGCCTTATAGAAGGTGAGTGGAAAAGCAGGGAA--------GGCAAACCCCCAAATTCAGGA-GGGAGGATGGAATTGGC s ponAbe2.chr17 158193 188 + 73212453 AGGGTCCTGAAAAC-TCCAAAGAGCAGTGCCCTGTGCATTAAACACAGACTGCGCCCTTGTACTCAGGTACGACCATTTGTCCTGGACAAAAATTAAACTGATGAGGGAACAAAATAGGGCCTTATAGAAGGTGAGTGGAAAAGCAGGGAA--------GGCAAACCCCCAGATTTAGGA-GAGAGGATGGAAGTGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273668 188 - 81552678 AGGGTCCTGAAAAC-TCCAAAGAGCAGTGCCCTGTGCATTAAACACAGACTGCACCCTTGTACTCACGTAAGACCATTTGTCCTGGACAAAAATTAAACTGATGAGGGAACAAAATAGGGCCTTATAGAAGGTGAGTGGAAAAGCAGGGAA--------GGCAAAGCCCCAAATTCAGGA-GGGAGGATGGAATTGGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 188796 169 + 80904711 --------------------AGAGCAGTGCCTTGTGCGTTAAACAGGGACCGTGCCCTTGTACTGATACACGGCCGTTTGTCCTGAACAAAAATTAAACTGATGAGGGAACAAAATAGGGCCTTATAGAAGGTGAGTGGAAAAGCAGGGAG--------GGCAAAGCCCCAAATTCGGGA-GGGAGGATGGAATCGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201010 169 + 80997621 --------------------AGAGCAGTGCCTTGTGCGTTAAACAGGGACCGTGCCCTTGTACTGATACACGGCCGTTTGTCCTGAACAAAAATTAAACTGATGAGGGAACAAAATAGGGCCTTATAGAAGGTGAGTGGAAAAGCAGGGAG--------GGCAAAGCCCCAAATTCGGGA-GGGAGGATGGAATCGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187387 169 + 74645514 --------------------AGAGCAGTGCCTTGTGCGTTAAACAGGGACCGTGCCCTTGTACTGATATACGGCCATTTGTCCTGAACAAAAATTAAACTGATGAGGGAACAAAATAGGGCCTTATAGAAGGTGAGTGGAAAAGCAGGGAG--------GGCAAAGCCCCAGATTCGCGA-GGGAGGATGGAATCGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 176966 169 + 75148670 --------------------AGAGCAGCGCCTTGTGCGTCAAACAGGGACTGCGCCCTCGTACTGATACACGGCCATTTGTCCTGAACAAAAAATAAACTGATGGGGGAACAAAATAGGGCCTTATAGAAGGTGAGTGGAAAAGCAGGGAA--------GGCAAAGCCCCAAATTCGGGA-GGGAGGATGGAACTGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994489 186 - 1291538 AGAGTCCTGAAAAC-CCCAAAGAGCAGCGCCACGTGC--TGAAAACAGACTGCGCCCTTGTGCTCCTATGTGGCCACTTGTCCCGGGCAAAAATCAGACTGATGAGGGAACACAATAGGACCTTACAGAAGGTGAGAGGAACAGCAGGGTA---------GCAAACCCCCAAATTCAGGAGGGGAGGATGGAGTTGGC i calJac3.chrUn_GL286409 C 0 I 5 s canFam3.chr9 15745874 186 - 61074082 TGGGTCCTTCAAGCTTCCAAAGAGCAGTGCTAGGGGAGCTGAATGTGGGCCACACCCTTGTCTTAACCAATGCTAAT---GCCTGGCCAAAA--TCAACTGATGAGGGAACCACACAGGGGCTAGAAGGAGGCAAGTGAAAAGGCAGGAGATTCCCCCTGGCAATTCC------TCAGGG-GGAAAGAGGGACTCAGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e panTro4.chr17 276860 897 + 82630442 M a score=5733.000000 s hg38.chr17_GL383563v3_alt 303423 3 + 375691 CTG s ponAbe2.chr17 158381 3 + 73212453 CTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273856 3 - 81552678 CTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 188965 3 + 80904711 CTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201179 3 + 80997621 CTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187556 3 + 74645514 Ctg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177135 3 + 75148670 CTG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15746060 3 - 61074082 CAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e calJac3.chrUn_GL286409 994675 5 - 1291538 I e panTro4.chr17 276860 897 + 82630442 M a score=22074.000000 s hg38.chr17_GL383563v3_alt 303426 8 + 375691 GGGAGCAG s ponAbe2.chr17 158384 8 + 73212453 GGGAGCAG i ponAbe2.chr17 C 0 I 336 s nomLeu3.chr19 273859 8 - 81552678 GGGAGAAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 188968 8 + 80904711 GGGAGCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201182 8 + 80997621 GGGAGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187559 8 + 74645514 gggagcag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177138 8 + 75148670 GGGAGCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994680 8 - 1291538 GGGAGCAG i calJac3.chrUn_GL286409 I 5 C 0 s canFam3.chr9 15746063 8 - 61074082 GGGCCTAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e panTro4.chr17 276860 897 + 82630442 M a score=5940.000000 s hg38.chr17_GL383563v3_alt 303434 3 + 375691 AGG s ponAbe2.chr17 158728 3 + 73212453 AGG i ponAbe2.chr17 I 336 C 0 s nomLeu3.chr19 273867 3 - 81552678 AGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 188976 3 + 80904711 GGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201190 3 + 80997621 GGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187567 3 + 74645514 ggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177146 3 + 75148670 TGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994688 3 - 1291538 AGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15746071 3 - 61074082 AGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e panTro4.chr17 276860 897 + 82630442 M a score=1673.000000 s hg38.chr17_GL383563v3_alt 303437 3 + 375691 CAG-- s ponAbe2.chr17 158731 3 + 73212453 CAG-- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 188979 3 + 80904711 CAG-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201193 3 + 80997621 CAG-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187570 3 + 74645514 cag-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177149 3 + 75148670 CAT-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994691 3 - 1291538 CAG-- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15746074 3 - 61074082 --GAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e nomLeu3.chr19 273870 0 - 81552678 C e panTro4.chr17 276860 897 + 82630442 M a score=36221.000000 s hg38.chr17_GL383563v3_alt 303440 33 + 375691 GAGGTTCTGTGGACAGGGCTGGTGGAGCTCTGG s ponAbe2.chr17 158734 33 + 73212453 GAGGTTTTGTGGACAGGGCTGGTGGAGCTCTGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 188982 33 + 80904711 GGGGTTCTGTGGACAGGGCTGGTGGAGCTCTGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201196 33 + 80997621 GAGGTTCTGTGGACAGGGCTGGTGGAGCTCTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187573 33 + 74645514 gaggTTCTGTGGACACGGCTGGTGGAGCTCTGA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994694 33 - 1291538 GAGGTTGTGCGGACAGGGCTGGTGGAGCCCCAG i calJac3.chrUn_GL286409 C 0 T 52 s canFam3.chr9 15746077 8 - 61074082 ------------GCAAGGCC------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e chlSab2.chr16 177152 0 + 75148670 C e nomLeu3.chr19 273870 0 - 81552678 C e panTro4.chr17 276860 897 + 82630442 M a score=8452.000000 s hg38.chr17_GL383563v3_alt 303473 16 + 375691 GGGGAGCAGAGGCAGG s ponAbe2.chr17 158767 16 + 73212453 GGGGAGCACAGGCAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 189015 13 + 80904711 GGGGAGAAGAGGC--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201229 13 + 80997621 GGGGAGAAGAGGC--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187606 16 + 74645514 GGGGAGAAGAGGCAGG i papAnu2.chr16 C 0 T 64 e mm10.chr11 75915647 287 + 122082543 I e canFam3.chr9 15746085 0 - 61074082 C e calJac3.chrUn_GL286409 994727 52 - 1291538 T e chlSab2.chr16 177152 0 + 75148670 C e nomLeu3.chr19 273870 0 - 81552678 C e panTro4.chr17 276860 897 + 82630442 M a score=10533.000000 s hg38.chr17_GL383563v3_alt 303489 32 + 375691 AGGTTTTGTGGACATGGTTGATGGACCTCTGC s ponAbe2.chr17 158783 32 + 73212453 AGGTTTTGTGGAGAGGGTTGGTGGATCTCTGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 189028 32 + 80904711 AGGTTCTGTGGACAGGGCTGGTGGAGCTCTGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201242 32 + 80997621 AGGTTTTGTGGACAGGGCTGGTGGAGCTCTGA i macFas5.chr16 C 0 C 0 s canFam3.chr9 15746085 6 - 61074082 -----------ACACGG--------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e calJac3.chrUn_GL286409 994727 52 - 1291538 T e chlSab2.chr16 177152 0 + 75148670 C e papAnu2.chr16 187622 64 + 74645514 T e nomLeu3.chr19 273870 0 - 81552678 C e panTro4.chr17 276860 897 + 82630442 M a score=11586.000000 s hg38.chr17_GL383563v3_alt 303521 16 + 375691 GGGGAGAAGACGGAGG s ponAbe2.chr17 158815 16 + 73212453 GGTGAGAAGAGGCAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 189060 16 + 80904711 GGGGAGAAGAGGCAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201274 16 + 80997621 GGGGAGAAGAGGCAGG i macFas5.chr16 C 0 I 225 s papAnu2.chr16 187558 16 + 74645514 ggggagcaggggcagg i papAnu2.chr16 T 64 C 0 e mm10.chr11 75915647 287 + 122082543 I e canFam3.chr9 15746091 0 - 61074082 C e calJac3.chrUn_GL286409 994727 52 - 1291538 T e chlSab2.chr16 177152 0 + 75148670 C e nomLeu3.chr19 273870 0 - 81552678 C e panTro4.chr17 276860 897 + 82630442 M a score=611.000000 s hg38.chr17_GL383563v3_alt 303537 3 + 375691 AGA s ponAbe2.chr17 158831 3 + 73212453 AGG i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 187574 3 + 74645514 agg i papAnu2.chr16 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e canFam3.chr9 15746091 0 - 61074082 C e calJac3.chrUn_GL286409 994727 52 - 1291538 T e chlSab2.chr16 177152 0 + 75148670 C e rheMac3.chr16 189076 0 + 80904711 C e macFas5.chr16 201290 225 + 80997621 I e nomLeu3.chr19 273870 0 - 81552678 C e panTro4.chr17 276860 897 + 82630442 M a score=13184.000000 s hg38.chr17_GL383563v3_alt 303540 12 + 375691 TTTTGTGGACAG s ponAbe2.chr17 158834 12 + 73212453 TTTTGTGGACAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 189076 12 + 80904711 TTCTGTGGACAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201515 12 + 80997621 TTTTGTGGACAG i macFas5.chr16 I 225 C 0 s papAnu2.chr16 187577 12 + 74645514 TTCTGTGGACAC i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15746091 11 - 61074082 -TCTGTGGAAAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e calJac3.chrUn_GL286409 994727 52 - 1291538 T e chlSab2.chr16 177152 0 + 75148670 C e nomLeu3.chr19 273870 0 - 81552678 C e panTro4.chr17 276860 897 + 82630442 M a score=18960.000000 s hg38.chr17_GL383563v3_alt 303552 13 + 375691 GGCTGGTGGAGCT s panTro4.chr17 277760 13 + 82630442 GGCTGGTGGAGCT i panTro4.chr17 M 897 C 0 s ponAbe2.chr17 158846 13 + 73212453 GGCTGGTGGAGCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 189088 13 + 80904711 GGCTGGTGGAGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201527 13 + 80997621 GGCTGGTGGAGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187589 13 + 74645514 GGCTGGTGGAGCT i papAnu2.chr16 C 0 C 0 e mm10.chr11 75915647 287 + 122082543 I e canFam3.chr9 15746102 0 - 61074082 C e calJac3.chrUn_GL286409 994727 52 - 1291538 T e chlSab2.chr16 177152 0 + 75148670 C e nomLeu3.chr19 273870 0 - 81552678 C a score=18142.000000 s hg38.chr17_GL383563v3_alt 303565 14 + 375691 CTGCGGGGAGCAGA s panTro4.chr17 277773 13 + 82630442 CTGGGGGGAG-AGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 158859 14 + 73212453 CTGTGGGGATCAGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 189101 14 + 80904711 CTGAGGGGAGAAGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201540 14 + 80997621 CTGAGGGGAGAAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187602 14 + 74645514 CTGAGGGGAGAAGA i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994675 14 - 1291538 CTGCAGGGAGCAGA i calJac3.chrUn_GL286409 T 52 C 0 e mm10.chr11 75915647 287 + 122082543 I e canFam3.chr9 15746102 0 - 61074082 C e chlSab2.chr16 177152 0 + 75148670 C e nomLeu3.chr19 273870 0 - 81552678 C a score=233.000000 s hg38.chr17_GL383563v3_alt 303579 2 + 375691 CA s panTro4.chr17 277786 2 + 82630442 GG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 158873 2 + 73212453 CA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 189115 2 + 80904711 GG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201554 2 + 80997621 GG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187616 2 + 74645514 GG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994689 2 - 1291538 GG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75915934 2 + 122082543 CA i mm10.chr11 I 287 C 0 e canFam3.chr9 15746102 0 - 61074082 C e chlSab2.chr16 177152 0 + 75148670 C e nomLeu3.chr19 273870 0 - 81552678 C a score=-10265.000000 s hg38.chr17_GL383563v3_alt 303581 3 + 375691 C--AG s panTro4.chr17 277788 3 + 82630442 C--AG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 158875 3 + 73212453 C--AG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273870 3 - 81552678 C--AG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 189117 1 + 80904711 C---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201556 1 + 80997621 C---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187618 3 + 74645514 CAG-- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994691 3 - 1291538 --CAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75915936 3 + 122082543 --CAG i mm10.chr11 C 0 C 0 e canFam3.chr9 15746102 0 - 61074082 C e chlSab2.chr16 177152 0 + 75148670 C a score=1883.000000 s hg38.chr17_GL383563v3_alt 303584 1 + 375691 G s panTro4.chr17 277791 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 158878 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273873 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 187621 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177152 1 + 75148670 G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994694 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75915939 1 + 122082543 A i mm10.chr11 C 0 C 0 e canFam3.chr9 15746102 0 - 61074082 C e rheMac3.chr16 189118 0 + 80904711 C e macFas5.chr16 201557 0 + 80997621 C a score=6871.000000 s hg38.chr17_GL383563v3_alt 303585 3 + 375691 AGG s panTro4.chr17 277792 3 + 82630442 TGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 158879 3 + 73212453 AGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273874 3 - 81552678 GGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 189118 3 + 80904711 AGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 201557 3 + 80997621 AGG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 177153 3 + 75148670 AGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994695 3 - 1291538 AGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75915940 3 + 122082543 AAG i mm10.chr11 C 0 C 0 e canFam3.chr9 15746102 0 - 61074082 C e papAnu2.chr16 187622 0 + 74645514 C a score=6393.000000 s hg38.chr17_GL383563v3_alt 303588 3 + 375691 TTC s panTro4.chr17 277795 3 + 82630442 TTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 158882 3 + 73212453 TTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273877 3 - 81552678 TTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 189121 3 + 80904711 TTC i rheMac3.chr16 C 0 I 2035 s macFas5.chr16 201560 3 + 80997621 TTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187622 3 + 74645514 TTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177156 3 + 75148670 TTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994698 3 - 1291538 TTG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75915943 0 + 122082543 C e canFam3.chr9 15746102 0 - 61074082 C a score=386592.000000 s hg38.chr17_GL383563v3_alt 303591 125 + 375691 TGTGGACAGGGCTG-GTGGAGCTCTGGCCACTTCCTCCGTAAACT---AGAGACGTGATCCCCAGGGCCAGGTCTGTCTCTGAGGTCCTACCAGCTG-----GGACAGGTAAGAGGCTGGGGAAGGAGGAGCgt s panTro4.chr17 277798 125 + 82630442 TGTGGACAGGGCTG-GTGGAGCTCTGGCCACTTCCTCAGTAAACT---AGAGACGTGATCCCCAGGGCCAGGTCTGTCTCTGAGGTCCTACCAGCTG-----GGACAGGTAAGAGGCTGGAGAAGGAGGGGCgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 158885 125 + 73212453 TGTGGACAGGGCTG-GTGAAGCTCTGGCCACTTCCTCAGTAAACT---AGAGACGTGATCCCCAGGGCCAGGTCTGTCTCTGAGGTCCTACCAGCTG-----GGACAGGTAAGAGGCTGGAGGAGGAGAGACgt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 273880 125 - 81552678 TGTGGACGGGGCTG-GTGAAGCTCTGGCCACTTCCTCGGTAAACT---AGAGACGTCATCCCCAGGGTCAGGTCTGTCTCTGAGGTCCTAGCAGCTG-----GGACAGGTAAGAGGCTGGAGGAGGAGGGGCgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 191159 127 + 80904711 TGTGGACAGGGCTG-GTGGAGCTCTGGCCACTTCCTCAGTAAACT-GGAGAGACGCGATCCCCAGGGCCAGATCTGTCTCTGAGGTACTCCCAGCTG-----GGACAGGTAAGAGGCTGGAGGAGAAGGGGGgt i rheMac3.chr16 I 2035 C 0 s macFas5.chr16 201563 124 + 80997621 TGTGGACAGGGCTG-GTGGAGCTCTGGCCACTTCCTCAGTAAACT-GGAGAGACGCGATCCCCAGGGCCAGATCTGTCTCTGAGGTACTCCCAGCTG-----GGACAGGTAAGAGGCC---GGAGAAGGGGGgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187625 119 + 74645514 TGTGGACGGGGCTG-GTGGAGCTCTGGCCAATTCCTCAGTAAACT-AGAGAGACGTGATCCCCAGGGCCAGGTCTGTCTCTGAGGTACTCCCAGCTG-----GGACAGGTAAGAGgcc-----agaagtgt--- i papAnu2.chr16 C 0 I 163 s chlSab2.chr16 177159 124 + 75148670 TGTGGACAGGGCTG-GTGGAGCTCTGGTCACTTCCTCAGTAAACT-AGAGAGACGTGATCCCCAGGGCCAGGTCTGTCTCTGAGGTACTCCCGGCTG-----GGACAGGTAAGAGGCC---GGAGAAGGAgtat i chlSab2.chr16 C 0 I 4 s calJac3.chrUn_GL286409 994701 121 - 1291538 TGCGGACAGGGCTG-GTGGAGCCCCAGCCACTTCCTCAGTAAACT---AGAGAAGTGATCCCCAGGGCCATGTCTGTCTCTGAGGTTCT-CCAGCTG-----GGACAGGTAAGAGGTT---AGAGAAGGGTtgt i calJac3.chrUn_GL286409 C 0 I 2 s mm10.chr11 75915943 102 + 122082543 -------ATGACTGTATGGGGCTCTGGTCACTTTCTCTATTAACC---AGAGAGGTGGCACACAGG---------ATCTCTAAGGTCATCTTAGCTA-----TGACAGGCAAGAGGCT--------AGAGGCAC i mm10.chr11 C 0 C 0 s canFam3.chr9 15746102 115 - 61074082 -------AGGGCTGCATGGAGCTCTGGCC---TCCTCTGGAAACAAGGGGAGAACAGGCTGCTGGGGCCAGGCCTGTCCCTGAAGTCCTTCCAGCTGTAAGTGGGAAGGAGAGAGGTt-------atgtggt-- i canFam3.chr9 C 0 C 0 a score=28282.000000 s hg38.chr17_GL383563v3_alt 303716 10 + 375691 gtgtgtgtgc s panTro4.chr17 277923 10 + 82630442 gtgtgtgtgt i panTro4.chr17 C 0 I 30 s ponAbe2.chr17 159010 10 + 73212453 gtgtgcgtgt i ponAbe2.chr17 C 0 I 22 s nomLeu3.chr19 274005 10 - 81552678 gtgtgtgtgt i nomLeu3.chr19 C 0 I 2 s rheMac3.chr16 191286 10 + 80904711 gtgtgtgtgc i rheMac3.chr16 C 0 I 1893 s macFas5.chr16 201687 8 + 80997621 gtgtgtgt-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187907 10 + 74645514 gtgtgtgtgc i papAnu2.chr16 I 163 C 0 s chlSab2.chr16 177287 10 + 75148670 gtgtgtgtgc i chlSab2.chr16 I 4 C 0 s calJac3.chrUn_GL286409 994824 10 - 1291538 atgtgtgtgt i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75916045 10 + 122082543 GTTTCAGTGA i mm10.chr11 C 0 C 0 s canFam3.chr9 15746217 10 - 61074082 gtgcatttgt i canFam3.chr9 C 0 C 0 a score=6935.000000 s hg38.chr17_GL383563v3_alt 303726 2 + 375691 gc s panTro4.chr17 277963 2 + 82630442 gt i panTro4.chr17 I 30 C 0 s ponAbe2.chr17 159042 2 + 73212453 gt i ponAbe2.chr17 I 22 C 0 s nomLeu3.chr19 274017 2 - 81552678 gc i nomLeu3.chr19 I 2 C 0 s rheMac3.chr16 193189 2 + 80904711 gt i rheMac3.chr16 I 1893 C 0 s macFas5.chr16 201695 2 + 80997621 gc i macFas5.chr16 C 0 I 548 s papAnu2.chr16 187917 2 + 74645514 gc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177297 2 + 75148670 gt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 994834 2 - 1291538 gt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75916055 2 + 122082543 GT i mm10.chr11 C 0 C 0 s canFam3.chr9 15746227 2 - 61074082 gc i canFam3.chr9 C 0 C 0 a score=7975.000000 s hg38.chr17_GL383563v3_alt 303728 2 + 375691 gt s panTro4.chr17 277965 2 + 82630442 gt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 159044 2 + 73212453 gt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274019 2 - 81552678 gt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 193191 2 + 80904711 gt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 202245 2 + 80997621 gt i macFas5.chr16 I 548 C 0 s papAnu2.chr16 187919 2 + 74645514 gt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177299 2 + 75148670 gt i chlSab2.chr16 C 0 I 466 s calJac3.chrUn_GL286409 994836 2 - 1291538 gt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75916057 2 + 122082543 GT i mm10.chr11 C 0 C 0 s canFam3.chr9 15746229 2 - 61074082 ac i canFam3.chr9 C 0 C 0 a score=42632.000000 s hg38.chr17_GL383563v3_alt 303730 11 + 375691 gtgtgtgtACA s panTro4.chr17 277967 11 + 82630442 gtgtgtgtACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 159046 11 + 73212453 gtgtgtATACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274021 11 - 81552678 gtgtgtgtACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 193193 11 + 80904711 gtgtgtgtACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 202247 11 + 80997621 gtgtgtgtACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187921 11 + 74645514 gcgtgtgtaCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177767 11 + 75148670 gtgtgtgtACA i chlSab2.chr16 I 466 C 0 s calJac3.chrUn_GL286409 994838 11 - 1291538 gtgtgtATACA i calJac3.chrUn_GL286409 C 0 I 296 s mm10.chr11 75916059 10 + 122082543 -CATGCGCATA i mm10.chr11 C 0 I 9 s canFam3.chr9 15746231 11 - 61074082 gtgtgcgcacc i canFam3.chr9 C 0 C 0 a score=24977.000000 s hg38.chr17_GL383563v3_alt 303741 9 + 375691 GGAGCATAT s panTro4.chr17 277978 9 + 82630442 GGAGCATAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 159057 9 + 73212453 GGAGCATAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274032 9 - 81552678 GGACCATAT i nomLeu3.chr19 C 0 M 100 s rheMac3.chr16 193204 9 + 80904711 TGAGCATGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 202258 9 + 80997621 TGAGCATGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187932 9 + 74645514 TGAGCATGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177778 9 + 75148670 CGAGCATGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 995145 9 - 1291538 TGAGCATGT i calJac3.chrUn_GL286409 I 296 C 0 s mm10.chr11 75916078 9 + 122082543 AGTGTATGT i mm10.chr11 I 9 C 0 s canFam3.chr9 15746242 7 - 61074082 --tgtgtgt i canFam3.chr9 C 0 C 0 a score=320437.000000 s hg38.chr17_GL383563v3_alt 303750 167 + 375691 TCAATGAGCACATAGGTCAAGGC-TGCTGATGGGGAAGGCAAGCCCCTCGTGGAGAGGGTGGGCAT-CCACCCAGGAGCCC-GCCCAGAAGTGTTCAGTTCTATCGACA-TGAAATttccatttctccttccctgctggaccttgggtgccctaga-gggtccctacatcct s panTro4.chr17 277987 168 + 82630442 TCAATGAGCACACAGGTCAAGGC-TGCTGATGGGGAAGGCAGGCCCCTCGTGGGGAGGGTGGACGTTCCACCCAGGAGCCT-GCCCAGAAGTGTTCAGTTCTATCGACA-TGAAATttccatttctccttccctgctggactgtgggcgccctaga-gggtccctacatcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 159066 169 + 73212453 TCAATGAGCACACAGGTCAAGGC-TGCTGATGTGGAAGGCAGGCCCATCGTGGGGAGGGTGGGCATTCCACCCAGGAGCCC-GCCCAGAAGTCTTCAGTTCTATCGACA-TGAAATttccatttctccttccctgctggactgtgggcgccctagaggggtccctacatcct i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 193213 163 + 80904711 TCGACGAGCCCACAGGCCAAGGC-CGCGGCTGAGGAAGGCAGGCCCATCGAGGGGAGGGGGGACATCCCTCCCAGGAGCCC-GCCCCGAAGTCTTCAGT----TCGACA-TGAAATttccatttctccttccccgctggactgt-ggctccccaga-gggtccctatgtcgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 202267 163 + 80997621 TCGACGAGCCCACAGGCCAAGGC-CGCGGCTGGGGAAGGCAGGCCCATCGAGGGGAGGGGGGACATCCCTCCCAGGAGCCC-GCCCCGAAGTCTTCAGT----TCGACA-TGAAATttccatttctccttccccgctggactgt-ggctccccaga-gggtccctacgtcgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 187941 163 + 74645514 TCGATGAGCCCACAGGCCAAGGC-CGCGGCTGGGGAAGGCAGGCCCATCGAGGGGAGGGGGGACATCCCTCCCAGGAGCCC-GCCCCGAAGTCTTGAGT----TCGACA-TGAAatttccatttctccttccccGCTGGACTGT-GGCTCCCTAGA-GGGTCCCTacatcct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177787 166 + 75148670 TCAATGAGCCCACAGGCCAAGGC-CGCGGCTGGGGAAGGCAGGCCCATCAAGGGGA-GGAGGACATCTCTCCCAGGAGCCC-GTCCCAAAGTCTTCAGTTCTATCGACA-TGAAATttccatttctccttccccgctggactgt-ggctccctaga-gggtccctacgtcct i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 995154 148 - 1291538 TCAATGAGCACACA----------------CAGGAAAGGCAGGCCCCTTATGGGGAGAGCAGGCATTCCACCCAGGAA------CCAGAAGTCCTCAGTTCTGTCAACA-TGAAATttccatttcttcttccccgctggactgtgggctgcctgga-gattccctacatcct i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75916087 144 + 122082543 TAGATGAACCC--AAGCCAAGAG-TGCTG--GGGTGGGGCATACCCCTCA-------------------ACCCTGGAGATTAGCTCAGGGGTCCTTGCTGGACCTGACAGTGGTATTTCTATCCTGTCTCCCT--CTACACTGT-GGCTCCTGGGA-AGGGGCCTGTGTTCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15746249 152 - 61074082 ---gtgtgcacatgtgcttgtgtgtTCTGCTGAGGAAAGAAgact--tcctgggggaggtgggc-tcacacctggg------gacccagagtcct--gctctactgaca---gtctgctcctctctcctccccgacaggcctgt-gggctcctag--gggcctgtgtctcct i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 274041 100 - 81552678 M a score=1764123.000000 s hg38.chr17_GL383563v3_alt 303917 600 + 375691 cctccttccctccct-tcctgatgccca-cacagagcctgctgcaaagtaggtgctcagggaatatccatttaatTCAACTGTATTTCATCAGAGAGATGTGG-CTTTCCCAGACAAGGAAGAATTCAGAAAACAGCCCAGACATGCTCAGAGCAGACA-GCTGGACTCTAACCAGGCTCTGCGACTTGCTGACTCAC-AGGCCGTTTGTCCCTCAAGATTCCCCACGGGGTAGTCGGCCTCAAGGCAG-------CTCCAC---CTGACGGCTGAGCTCGCTCCTTGCTGAGGGGCTGGTGCCCCCAGGAGCCTCCTCT-GGGAAGCTGAGACCTCCTGGTGCCACCTCGACCCCGCCGGGCGACACACGCTG----AGCAGAGGCAGCACTCGGGCTGGCCGGCCCAGCAGGCAGATGTTCCGGAACCCTT-GTAAAACCCCGCAGTACAGGGACTAGGAGGA-CCCGAGGGGTACAGGGAA--CGGAACAGGAGTTGCC-GGTGATAATTTCCC-GAAAAATTCCTAGGG--------GACAG-AGGCTCATCAGCCCCAGGCAACTTCCTGAGACAGATCGGTAAAAA-CAACCCCTTCTTCCAGGAGGATGCAATT---CTCTCTCTAAAGTCG s panTro4.chr17 278155 601 + 82630442 cctccttccctccct-ccctgatgcccagcacacagcctgctgcaaagtaggtgctcagggaatatccatttaatTCAACTGCATTTCAGCAGAGAGATGTGG-CTTTCCCAGACAAGGAAGAATTTGGAAAACAACCCAGACATGCTCAGAGCAGACA-GCTGGGCTCTAACCAGGCTCTGCAACTTGCTGACTCAC-CAGCCGTTTGTTCCTCAAGATTCCCCACGGGGTAGTCGGCCTCAAGGCAG-------CTCCAC---CTGACAGCTGAGCTCGCTCCTCGCTGAGGGGCTGGTGCCCCCAGGAGCCTCCTCT-GGGAAGCTGATACCTCCGGGTGCCACCTCGACCCCGCCGGGCGACACACGCTG----AGCAGAGGCAGCACTCGGGCTGGCCGGCCCAGCAGGCAGATGTTCCCGAGCCCTT-GTAAAACCCCGCAGTACAGGGACTAGGAGGA-CCCGAGGGGAACAGGGAA--CGGAACAGGAGTTGCC-GGTGATAATTTCCC-GAAAAATTCCTAGGG--------GACAG-AGGCTCATCAGCCCAAGGCAACTTCCTGAGACAGATCTGTAAAAA-CAACCTCTTCATCCAGGAGGATGCAATT---CTCTCTCTAAAGTCG i panTro4.chr17 C 0 I 1661 s ponAbe2.chr17 159235 602 + 73212453 cctccttccgtccct-ccctgatacccaggacagggcctactgcaaagtaggtgctcagggaatatccatttaatTCAACTGTATTTCATCAGAGAGATGTGG--TTTCCCAGACAAGGAAGAATTCAGAAAACAACCCAGACATGCTCAGAGCAGACA-GCTGGGCTCTAACCAGGCTCTGTGACTTGCTGACTCAC-AGGCTGTTTGTTCCTCAAGATTCCCCACGGGGTAGTCAGCCTCAAGGCAG-------CTCCAC---CTGACAGCTGAGCTCGCTCCTCGCTGAGGGGCTGGTGCCCCCAGGAGCCTCCTCT-GGGAAGCTGAGACCTCCTGGTGCCACCTCGACCCCGCCAGGCGACACACGCTG----AGCAGAGGCTGCACTCGGGCTGGCCGGCCCAGCAGGCAGATGTTCCCAAGCCCTT-GTAAAACCCCGCAGTGCAGGGACTAGGAGGACCCCGAGGGGAACAGGGAA--GGGAACAGGAGTTGCCTGGTGATAATTTCCT-GAAAAATTCCTAGGG--------GACAG-AGGCTCATCAGCCCCAGGCAACTTCCTGAGACAGATCTGTAAAAA-CAACCCCTTCTTCCAGGAGGATGCAATT---CTCTCTCTAAAGTCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274142 599 - 81552678 CCTCCTTCCCTCCCt-ccctgatgccccgcacagggcctgctgcaaagtaggtgctcagggaatagccatttaatTCAACCGCATTTCATCAGAGACATGTGG-CTTTCCCAGACAA-GAAGAATTCAGAAAACAACGCAGACATGCTCAGAGCAGACA-GCTGGGCTCTAACCAGGCTCTGCGACTTGCTGACTCAC-AGGC-GTTTGTTCCTCAACATTCCCCATGGGGTAGTCGGCCTCACCACAG-------CTCCAC---CTGACAGCTGAGCTCGCTCCTCGCTGAGGGGCTGGTGCCCCCAGGAGCCTCCTCT-GGGAAGCTGAGATCTCCTGGTGCTACTTCGACCCCGCCGGGCAACACA--CTG----AGCAGAGGCTGCACTCGGGCTGGCCGACCCGGCAGGCAGATGTCCCCGAGCCCTT-GTAAAACCCTGCAGTACAGGGACTAGGAGGA-CCCGAGGGGAACAGGGAA--GGGGACAGGAGTTGCCTGGTGATAATTTCCCGGAAAAATTCCTAGGG--------GACAG-AGGCTCATCAGCCCCAGGCAACTTCCTGAGACAGATCTGTAAAAA-CAACCCCTTCTTCCAGAAGGGTGCAATT---CTCTCTCTAAAGTCG i nomLeu3.chr19 M 100 C 0 s rheMac3.chr16 193376 583 + 80904711 ----cctccctccct-ccctgatgcccagcaccgggcctgctgcaaagtaggtgttcagggaatatccatttaatTCAACTGCATTTCATCAGAGAGATGTGGCCTTCCCCAGACAAGGAAGAATTCAGAAAACCACCCAGACGCGCTCCGAGCAGACA-GTCGGGCTCTAACCAGGCTCTGCGACTGGCTGGCTCAT-AAGCCTCTTATTCCTC-AGATTCCCCACGGGGTCGTCAGCCTCACGGCAG-------CTCCAC---CTGACAGCTGGGCTTGCTCCTGGCTGC-GGGCTGGTGCCCCCC-GAGCCTCCTCT-GGGAAGCTGAGACCTCCTGGTGCCACCTCGACCCCGACGGGCGACAAG--CTG----AGCAGAGGCTGCACTCGGGCCGGCCGGCCCGGCAGGCAGATGCTCCTGAGCCCCTGGTAAAACCCCACAGTAC-GGGACTAGGAGGG-CCCAAGCGGAACAGGGAG--GGGAACACGAGTTGCCTGGTGATAATTTCCTGAGAAAATTCCTAGGG--------GACAG-AGGTTCATCAGC------------CCTGAGACAGATCCGTAAACA-CAACCCCTTCCTCCAGGGGGATGCAATT---CTCTCTCTAAAGTTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 202430 583 + 80997621 ----cctccctccct-ccctgatgcccagcaccgggcctgctgcaaagtaggtgttcagggaatatccatttaatTCAACTGCATTTCATCAGAGAGATGTGGCCTTCCCCAGACAAGGAAGAATTCAGAAAACCACCCAGACGTGCTCAGAGCAGACA-GTCGGGCTCTAACCAGGCTCTGCGACTGGCTGGCTCAT-AAGCCTCTTATTCCTC-AGATTCCCCACGGGGTCGTCAGCCTCACGGCAG-------CTCCAC---CTGACAGCTGGGCTTGCTCCTGGCTGC-GGGCTGGTGCCCCCC-GAGCCTCCTCT-GGGAAGCTGAGACCTCCTGGTGCCACCTCGACCCCGACGGGCGACAAG--CTG----AGCAGAGGCTGCACTCAGGCCGGCCGGCCCGGCAGGCAGATGCTCCTGAGCCCCTGGTAAAACCCCACAGTAC-GGGACTAGGAGGG-CCCAAGCGGAACAGGGAG--GGGAACACGAGTTGCCTGGTGATAATTTCCTGAGAAAATTCCTAGGG--------GACAG-AGGTTCATCAGC------------CCTGAGACAGATCCGTAAACA-CAACCCCTTCCTCCAGGGGGATGCAATT---CTCTCTCTAAAGTTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 188104 599 + 74645514 cctccctccctccct-ccctgatgCCCAGCACCGGGCCTGCTGCAAAGTAGGTGTTCAGGGAATATCCATTTAATTCAACTGCATTTCATCAGAGAGATGTGGCCTCCCCCAGACAAGGAAGAATTCAGAAAACCACCCAGACGTGCTCAGAGCAGACA-GCCGGGCTCTAACCAGGCTCTGCGACTGGCTGGCTCAT-AAGCCTTTTGTTCCTC-AGATTCCCCACGGGGTCGTCAGCCTCACGGCAG-------CTCCAC---CTGACAGCTGGGCTCGCTCCTGGCTGC-GGGCTGGTGCCCCCC-GAGcctcctct-gggaagctgagACCTCCAGGTGCCACCTCGACCCCGCCGGGCGACAAG--CTG----AGCAGAGGCTGCACTCAGGCCGGCCGGCCCGGCAGGCGGATGCTCCTGAGCCCCTGGTAAAACCCCACAGTAC-GGGACTAGGAGGG-CCCAAGGggaacagggag--gggaacaggaGTTGCCTGGTGATAATTTCCTCAGAAAATTCCTAGGG--------GACAG-AGGTTCATCAGCTCCAGGCAACTTCCTGAGACAGATCCGTAAACA-CAACCCCTTCCTCCAGGGGGATGCAATT---CTCTCTCTAAAGTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 177953 599 + 75148670 cctccctccctccct-ccctgatgcccagcaccgggcctgctgcaaagtaggtgttcagggaatatccatttaatTCAACTGCATTTCATCAGAGAGATGTGGCCTTCCCCAGACAAGGAAGAATTCAGAATACAACCCAGACACGCTCAGAGCAGACA-GTCCGGCTCTAACCAGGCTCTGAGACTTGTTGGCTCAT-AAGCCTTTTGCTCCTC-AGAATCCCCACGGGGTCGTCAGCCTCACGGCAG-------CTCCAC---CTGACAGCTGGGCTCACTCCTGGCTGT-GGGCTGGTGCCCCCA-GAGCCTCCTCT-GGGAAGCTGAGACCTCCTGGTGCCACCTCAACCCCGCCAGGCGACAAG--CTG----AGCAGAGGCTGCACTCAGGCCAGCCGGCCCGGCAGGCAGATGTTCCTGAGCCCCTTGTAAAACCCCACAGTAC-GGGACTAGGAGGA-CCCAAGGGGAACAGGGAG--GGGAACAGGAGTTGCCTGGTGATAATTTCCTGAGAAAATTCCTAGGG--------GAGAG-AGGTTCACCAACCCCAGGCAACTTCCTGAGACAGATCCGTAAACA-CAACCCCTTCTTCCAGGGGGATGCAATT---CTCTCTCTAAAGTCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 995302 596 - 1291538 cctcctgccctccct-ccctgatgcctagcacagggcctgctgcaaagcaggtgctc--ggaatatccatttaatTCAACTGCATTTCATCAGAGA----TGGCCCTTCCCAGACAAGGCAGAATTCAGAAGACAACGCAGATGTGCTCTGAACCAACA-GCAAGGCTCTAACCACGCTCTGCGACTTGTTGACTCAG-AGGCAGTTTGTTCCTTCAGGTTCCCCATGGGGTAGTCAGCCTGGCGGCAG-------CTCCACCATCTAAGAGCCAAGACCACTCTCTGCTGAGAGGCTGGTGCCCCCAGGAGCCTCCTCT-GGGAAGCCGAGACCTCCGGGAGCTGCCTGGA-CCCGCCAGGCGACACAAGCTG----AGCAGAGGCTGCACTCAGTTTGGCCG-CCTGGCAGGCAGATGCTCCC-AGCCCTTCCTAAAACCCCACAGTTCAGGGACCAGG-GGA-CCCCAGGAGAGTAGGGGA--GGGAAATGGAGTTGCCTGGTGATAATTTCCTGAGAAAATTCCTAAGG--------GCCAG-AGGTTCGTCAGCCCCAGACAACTTTCTGAGACAGATGTATAAAAG-CAGCCCCTTCTTCCAGGGG--TCCACTT---CTCTCTCTAAAGTCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75916231 516 + 122082543 ----CTCCTCTCTATACCTTGTTGCCCAGGG-------------------------CAGGGATTATCTGGTAAGCTGAGCTGTGTTTCATGGGACA------GCTCTTCCCAAATAA-AAGGCCTTTAACCAGAAAATCAGATGTGCCAAGAGCAGACAGGCCAGGCTCTAGCCAGGCTCGGTGACGGGTTGGTTCAT-AGGCAGTTTGTTCCTCAAGATCCCCCCATAGGTCATCTGTGT---GGCAGTGAGTGCCTCTGT---CTGACAGCTCAGCTGATTTCCCG--GAGGGGTTGGAGCACCCAGGGGCCCTTTGTGGGGAAGCAGCTGCCTCCTGGTGTCTCTCATCCCGTGCTGGGAGAGACAAGTTG----AGCAGAGGCTGC--------------GTCTAGTAGACACA--CTGAGGGGCCCTT-------------------CAGGCTGTGGGGT-GCTGAAGG---CAGGCAG--GGG--CAGGAGAGGCT-TATGCCAACTTCTTGAGAAGATTCCTAGAG--------GGCAGAAGGTTCATGAACCCCTGGCAA--TGCTGAG-CAAATG--------------CTTTGCTGCTGAGCTATTAGGT-----TCTCTCCAAAGTGA i mm10.chr11 C 0 I 1 s canFam3.chr9 15746401 564 - 61074082 ----cctctctccat--cctggagcccagcgcagggcctgctacaaagcaggtgctcagtgact--ctgttgggtggaACTG-ACTTCATCAGAGAGA--TGGCTGTTCCCAGATAAGGAGTAATTCAGACAA---------------CAGAGCAGA---GTTGGGTTCCAACCATGCTCTGTGACTTGTTCACTCACAAAACACTTTGTTCCTCAGGACTCCCCACAGGGTAGTCAGCACC-CAGTGG-------C--------TTGGCAGCTGAGCCACCTCCCCTCAAG-AGGCCAGCGTGCCCTAAGGTCTCCACT-AGGACGTTGAG-CCTCCAGGTGCCACCTTTATCTTGCTGAGTGAGACTAGCCAAGCTAGCAGAGGCTGTGCCCT-------------------CAGGAGCCCATGGGCTC---AGGGGGCCTCACGGTGTGTGTGGGGTGTGTG-TGTGGGTGGAACCAGGAACCAGGAACAGGAAATGCCTGCCTAGGATTTCCTGATACATTTC--AGGGTGGGGGAAGAAGG-AGGTTCTGGAGCCTCCAGCAACTTTCTGAGGCAGATCTGTGAAAGCCAACTCATTCTTGCAGGAG-ACCTAATTCTCCTCTCCCTCAAGTCC i canFam3.chr9 C 0 C 0 a score=77547.000000 s hg38.chr17_GL383563v3_alt 304517 23 + 375691 AGAGCTCACCACCCCGGGCGTTC s panTro4.chr17 280417 23 + 82630442 AGAGCTCACCACCCCAAGAGTTA i panTro4.chr17 I 1661 C 0 s ponAbe2.chr17 159837 23 + 73212453 AGAGCTCACCACCCTGGGCATCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274741 23 - 81552678 AGAGCTCACCACCCTGGGTGTTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 193959 23 + 80904711 AGAGCTCACCACCCCAGGCGTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 203013 23 + 80997621 AGAGCTCACCACCCCGGGCGTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 188703 23 + 74645514 AGAGCTCACCACCCCGGGCGTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178552 23 + 75148670 AGAGCTCACCACCCGGGGCGTCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 995898 20 - 1291538 AAAGCT---CACCCTGGGTGTTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75916748 23 + 122082543 AAAGCTGGCCCTCTCAGGTGCTC i mm10.chr11 I 1 I 276 s canFam3.chr9 15746965 23 - 61074082 AAAGCTCATCACCCTGGGTGTTA i canFam3.chr9 C 0 C 0 a score=40093.000000 s hg38.chr17_GL383563v3_alt 304540 13 + 375691 GTCACTGCAGACA s panTro4.chr17 280440 13 + 82630442 GTCACTGCAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 159860 13 + 73212453 Gtcactgcagaca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274764 13 - 81552678 Gtcactgcagaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 193982 13 + 80904711 GTCACTGCAGACA i rheMac3.chr16 C 0 I 16 s macFas5.chr16 203036 13 + 80997621 GTCACTGCAGACA i macFas5.chr16 C 0 T 36 s papAnu2.chr16 188726 13 + 74645514 GTcaccgcagaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178575 13 + 75148670 GTCACTgcagaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 995918 13 - 1291538 GTCACGGGAGACA i calJac3.chrUn_GL286409 C 0 I 1 s canFam3.chr9 15746988 8 - 61074082 GTCACCAC----- i canFam3.chr9 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I a score=13646.000000 s hg38.chr17_GL383563v3_alt 304553 11 + 375691 TCACTGCAGAC s panTro4.chr17 280453 11 + 82630442 TCACTGCAGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 159873 11 + 73212453 tcactgcagac i ponAbe2.chr17 C 0 I 196 s nomLeu3.chr19 274777 11 - 81552678 tcactgcagac i nomLeu3.chr19 C 0 I 12 s papAnu2.chr16 188739 11 + 74645514 tcaccacagac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178588 11 + 75148670 ccaccgcagac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 995932 11 - 1291538 ATGCCGCAGCC i calJac3.chrUn_GL286409 I 1 C 0 s canFam3.chr9 15746996 7 - 61074082 ---CAGCAAA- i canFam3.chr9 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=1911.000000 s hg38.chr17_GL383563v3_alt 304564 1 + 375691 A s panTro4.chr17 280464 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160080 1 + 73212453 a i ponAbe2.chr17 I 196 C 0 s nomLeu3.chr19 274800 1 - 81552678 a i nomLeu3.chr19 I 12 C 0 s papAnu2.chr16 188750 1 + 74645514 a i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178599 1 + 75148670 a i chlSab2.chr16 C 0 I 229 s calJac3.chrUn_GL286409 995943 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747003 0 - 61074082 C e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=1500.000000 s hg38.chr17_GL383563v3_alt 304565 1 + 375691 C s panTro4.chr17 280465 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160081 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274801 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 188751 1 + 74645514 c i papAnu2.chr16 C 0 I 33 s calJac3.chrUn_GL286409 995944 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747003 0 - 61074082 C e chlSab2.chr16 178600 229 + 75148670 I e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=1910.000000 s hg38.chr17_GL383563v3_alt 304566 2 + 375691 AG s panTro4.chr17 280466 2 + 82630442 AG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160082 2 + 73212453 AG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274802 2 - 81552678 AG i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 995945 2 - 1291538 AG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747003 0 - 61074082 C e chlSab2.chr16 178600 229 + 75148670 I e papAnu2.chr16 188752 33 + 74645514 I e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=8167.000000 s hg38.chr17_GL383563v3_alt 304568 17 + 375691 AGACGGCCATTAGAGCT s panTro4.chr17 280468 17 + 82630442 AGATGGCCATTAGAGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160084 17 + 73212453 AGACACCCATTAGAGCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274804 17 - 81552678 AGACAGCCATTAGAGCT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747003 0 - 61074082 C e calJac3.chrUn_GL286409 995947 0 - 1291538 C e chlSab2.chr16 178600 229 + 75148670 I e papAnu2.chr16 188752 33 + 74645514 I e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=10742.000000 s hg38.chr17_GL383563v3_alt 304585 13 + 375691 CACCACCCCGGGC s panTro4.chr17 280485 13 + 82630442 CACCACCCCGGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160101 13 + 73212453 CACCACCCTGGGC i ponAbe2.chr17 C 0 I 201 s nomLeu3.chr19 274821 13 - 81552678 CACCGCCCCGGGC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 188785 13 + 74645514 caccaccCTGGGT i papAnu2.chr16 I 33 C 0 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747003 0 - 61074082 C e calJac3.chrUn_GL286409 995947 0 - 1291538 C e chlSab2.chr16 178600 229 + 75148670 I e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=1857.000000 s hg38.chr17_GL383563v3_alt 304598 5 + 375691 GTTCG s panTro4.chr17 280498 5 + 82630442 GTTAG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 274834 5 - 81552678 GTTAG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 188798 5 + 74645514 GTCAG i papAnu2.chr16 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747003 0 - 61074082 C e calJac3.chrUn_GL286409 995947 0 - 1291538 C e chlSab2.chr16 178600 229 + 75148670 I e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T e ponAbe2.chr17 160114 201 + 73212453 I a score=7422.000000 s hg38.chr17_GL383563v3_alt 304603 13 + 375691 TCACTGCAGACAT s panTro4.chr17 280503 13 + 82630442 TCACTGCAGACAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160315 13 + 73212453 tcactacagacat i ponAbe2.chr17 I 201 C 0 s nomLeu3.chr19 274839 1 - 81552678 ------------T i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 188803 13 + 74645514 TCGCTgcagacac i papAnu2.chr16 C 0 I 12 s canFam3.chr9 15747003 12 - 61074082 -CACTACAGTCAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e calJac3.chrUn_GL286409 995947 0 - 1291538 C e chlSab2.chr16 178600 229 + 75148670 I e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=16541.000000 s hg38.chr17_GL383563v3_alt 304616 22 + 375691 CACTGCAGACACAGAGAAGGCC s panTro4.chr17 280516 22 + 82630442 CACTGCAGACACAGAGATGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160328 22 + 73212453 cactgcagacaCAGAGACACCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274840 17 - 81552678 CACTGCAGACA-----AAGGCC i nomLeu3.chr19 C 0 T 45 s papAnu2.chr16 188828 22 + 74645514 cactgcagacacAGAGACGCCC i papAnu2.chr16 I 12 C 0 s chlSab2.chr16 178829 22 + 75148670 caccgcagacacaGAGACGGCC i chlSab2.chr16 I 229 C 0 s canFam3.chr9 15747015 5 - 61074082 GGCTG----------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e calJac3.chrUn_GL286409 995947 0 - 1291538 C e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=2045.000000 s hg38.chr17_GL383563v3_alt 304638 3 + 375691 ATT s panTro4.chr17 280538 3 + 82630442 ATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160350 3 + 73212453 ATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274812 3 - 81552678 ATT i nomLeu3.chr19 T 45 C 0 s papAnu2.chr16 188850 3 + 74645514 ATG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178851 3 + 75148670 CTT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747020 0 - 61074082 C e calJac3.chrUn_GL286409 995947 0 - 1291538 C e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 36 + 80997621 T a score=52934.000000 s hg38.chr17_GL383563v3_alt 304641 36 + 375691 AGAGCTCACCACCCCGGGCGTTCG------------TCACTGCAGACA s panTro4.chr17 280541 36 + 82630442 AGAGCTCACCACCCCGGGCGTTAG------------TCACTGCAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160353 48 + 73212453 AGAGCTCACCACCCTGGGCATCAGtcactgcagacatcactgcagaca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274815 36 - 81552678 AGAGCTCACCGCCCCGGGCGTTAG------------TCACTGCAGACA i nomLeu3.chr19 C 0 I 6 s macFas5.chr16 203013 36 + 80997621 AGAGCTCACCACCCCGGGCGTCAG------------TCACTGCAGACA i macFas5.chr16 T 36 C 0 s papAnu2.chr16 188853 36 + 74645514 AGAGTTCACCACCCCGGGCGTCAG------------TCATTGCAGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178854 36 + 75148670 AGAGTTCACCACCCCGGGCATCAG------------TCACTGcagcca i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15747020 13 - 61074082 ---GCT-----------------G------------TCTCTGAGG--- i canFam3.chr9 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e calJac3.chrUn_GL286409 995947 0 - 1291538 C e rheMac3.chr16 193995 16 + 80904711 I a score=510.000000 s hg38.chr17_GL383563v3_alt 304677 5 + 375691 TCACT s panTro4.chr17 280577 5 + 82630442 TCACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160401 5 + 73212453 tcact i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 188889 4 + 74645514 -AAGG i papAnu2.chr16 C 0 I 2 s chlSab2.chr16 178890 4 + 75148670 -cagc i chlSab2.chr16 C 0 I 1 e mm10.chr11 75916771 276 + 122082543 I e canFam3.chr9 15747033 0 - 61074082 C e calJac3.chrUn_GL286409 995947 0 - 1291538 C e rheMac3.chr16 193995 16 + 80904711 I e macFas5.chr16 203049 0 + 80997621 C e nomLeu3.chr19 274851 6 - 81552678 I a score=17288.000000 s hg38.chr17_GL383563v3_alt 304682 16 + 375691 GCAGACACAGAGACGG s panTro4.chr17 280582 16 + 82630442 GCAGACACAGAGACGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160406 16 + 73212453 gcagacaCAGAGATGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274857 16 - 81552678 GCAGCCACAGCCACAG i nomLeu3.chr19 I 6 C 0 s macFas5.chr16 203049 16 + 80997621 AAGGCCACAGCCACAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 188895 16 + 74645514 GCAGCCGCAGCCACAG i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 178895 16 + 75148670 acagccacagccacag i chlSab2.chr16 I 1 C 0 s canFam3.chr9 15747033 8 - 61074082 --------GGCAATGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I e calJac3.chrUn_GL286409 995947 0 - 1291538 C e rheMac3.chr16 193995 16 + 80904711 I a score=137334.000000 s hg38.chr17_GL383563v3_alt 304698 51 + 375691 CCATTATGCAGCCTCACGTGGTCACTCCTGGGGGCGGTAGGATATTTTATC s panTro4.chr17 280598 51 + 82630442 CTATTATGCAGCCTGACGTGGTCACTCCTGGGGGCTGTAGGATATTTGATC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160422 51 + 73212453 CCATTATGCAGCCTCACGTGGTCGCTCCTGGGGGCTGTGGGATATTTGATC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 274873 51 - 81552678 CCGTTATGCAGCCTCGCGTAGCTGCTCCTGGGGGCTGTGGGATATTTGATC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 194011 50 + 80904711 CCATTATGCAGCCTCACGCGGTCGCTCCTGGGGGCTGTGGGATATTC-ATC i rheMac3.chr16 I 16 C 0 s macFas5.chr16 203065 50 + 80997621 CCATTATGCAGCCTCACGCGGTCGCTCCTGGGGGCTGTGGGATATTC-ATC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 188911 50 + 74645514 CCATTATGCAGCCTCACGCGGTCGCTCCTGGGGGCTGTGGGATAttc-atc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178911 50 + 75148670 ccaTTATGCAGCCTCACATGGTCGCTCCTGGGGGCTGTGGGACATTC-ATC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 995947 50 - 1291538 TCATTACGCACCCTCACGCAGTC-TTCCCAGGTGCTGTAGGATATTGCATC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15747041 45 - 61074082 CCATGACGCACCTGCACACAGCGTCTCCTAGGGTCTACGGGGTAT------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75916771 276 + 122082543 I a score=270373.000000 s hg38.chr17_GL383563v3_alt 304749 107 + 375691 CTaaagagaaa--------a-caccttaaattctcacatcagcc--a-cccccatggcgactcttaacaccttaatgtagcaccttccaacttttcctgggcatttatgtacaaattgt s panTro4.chr17 280649 107 + 82630442 CTaaagagaaa--------a-caccttaaattctcacatcagcc--a-cccccatggcgactcttaacaccttaatgtaacaccttccaacttttcctgggcatttatgtacaaattgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160473 107 + 73212453 CTaaagagaaa--------a-caccttaaattcccgtgtcatcc--a-cccccatggcgactcttaacactttaatgtagcaccttccaacttttcctgggcatttatgtacacgtttt i ponAbe2.chr17 C 0 I 1 s nomLeu3.chr19 274924 107 - 81552678 CTAAAGAGAAG--------A-CACCTTAAATTCACACGTCAGCC--A-CCCCCATGGCGACTCTTGACACCTTAATGTAGCACCTTCCAACTTTTCCTGGGCATTTATGTACACATTTT i nomLeu3.chr19 C 0 I 177 s rheMac3.chr16 194061 106 + 80904711 CCAAAAAGAAA--------A-CACCTTAAATTCAGGCGCCAGCC--A-CCCCCATGACGACTCTCAACACCTTAATGTAGCACCTTCCAACCTTTCCTAGGCA-TTACGTACAAATCCT i rheMac3.chr16 C 0 I 1 s macFas5.chr16 203115 104 + 80997621 CCaaaaagaaa--------a-caccttaaattcaggcgccagcc--a-cccccctgacgactctcaacaccttaatgtagcaccttccaacctttcctaggca-ttacgtacaaatc-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 188961 104 + 74645514 ccaaaaagaaa--------a-cacCTTAAATTCAGGCGCCAGCC--A-CCCCCATGGCGACTCTCAACACCTTAATGTGGCACCTTACAACCTTTCCTATGCA-TTACGTACAAATC-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 178961 106 + 75148670 CCaaaaagaaa--------a-caccttaaattcaggcgccaacc--a-cccccatggcgactcttaacaccttaatgtagcgccttccaacctttcctaggca-ttacgtacaaatctt i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 995997 112 - 1291538 ATAGAGAGAAAATGAAAACA-CACCTTACGTTCGC-TGCCAGCC--ACCCCCCATGGCGACTCTGAATGTCTTAACGCAGCACCTTCCAGTTTTTCC-AGGTATTTGTGTACACATT-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917047 104 + 122082543 CGAAAGTTAAA--------G-CATCACCAACTCCATCGTCACCCCTG-CCCCCAGGATGATGCTCG-CATCTGAACGGAG----TCAGGAGTTTCCCTAGAGACTTACACACGGGTGTT i mm10.chr11 I 276 C 0 s canFam3.chr9 15747086 102 - 61074082 -CACAGGGAAA--------ACCAGCCCACACACAT-CATCACCC--A-CCCAGAGGAAGACTCCTGACATCTCAGTAGGAGGCCTCCCAATTTTATCCAGGTATTTCTGTAGAGA---- i canFam3.chr9 C 0 C 0 a score=50766.000000 s hg38.chr17_GL383563v3_alt 304856 38 + 375691 aataaaattgggttcttactgcatacgctgcttgctgg s panTro4.chr17 280756 38 + 82630442 aataaaattgggttcttactgcatacactgcttgctgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160581 38 + 73212453 aataaaattaggttcttactgcatacactgcttgctgg i ponAbe2.chr17 I 1 C 0 s nomLeu3.chr19 275208 38 - 81552678 AATAAAATTGGGTTCTCACTGCATGCACTGCTTGCTGG i nomLeu3.chr19 I 177 C 0 s rheMac3.chr16 194168 38 + 80904711 aataaaactgggtttttactacatacacggcttgctgg i rheMac3.chr16 I 1 C 0 s chlSab2.chr16 179068 38 + 75148670 aataaaactggtttcttactacatacactgcttgctgg i chlSab2.chr16 I 1 I 146 s mm10.chr11 75917151 25 + 122082543 -----AACTGGGTCCTTACCGC--------CTTCCAGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15747188 0 - 61074082 C e calJac3.chrUn_GL286409 996109 0 - 1291538 C e papAnu2.chr16 189065 0 + 74645514 C e macFas5.chr16 203219 0 + 80997621 C a score=4397.000000 s hg38.chr17_GL383563v3_alt 304894 3 + 375691 ttt s panTro4.chr17 280794 3 + 82630442 ttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160619 3 + 73212453 ttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 275246 3 - 81552678 TTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 194206 3 + 80904711 ttt i rheMac3.chr16 C 0 I 143 s mm10.chr11 75917176 3 + 122082543 CTT i mm10.chr11 C 0 C 0 s canFam3.chr9 15747188 2 - 61074082 -TT i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 996109 0 - 1291538 C e chlSab2.chr16 179106 146 + 75148670 I e papAnu2.chr16 189065 0 + 74645514 C e macFas5.chr16 203219 0 + 80997621 C a score=297311.000000 s hg38.chr17_GL383563v3_alt 304897 190 + 375691 ctaaataaaattgggttcttactatatatgctgcttgctgg-ttttttaaaccaccttgtgc-tttcccacagtattaaagttctttaaaaatatgattttaaactataacttagtattctgaatacaatacgttttaccatcttcctgtttgggagcacatggattgtttccaattttgctcgattatatg s panTro4.chr17 280797 190 + 82630442 ttaaataaaattgggttcttactatatacgctgcttgctgg-ttttttaaaccaccttgtgc-tttcccacagtattaaagttctttaaaaacatgattttaaactataacttagtattctgaatacaatacgttttaccatcttcctgtttgggagcacatggattgtttccaattttgctcgattatatg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160622 190 + 73212453 ttaaataaaattgggttcttactgcatacactgcttgctgg-ttttttaaaccacattgtgc-tttcccacattattaaagttctttaaaaatatgattttaaactataacttagtattctgaatacaatacgttttaccatcttcctgtttgggagcacatggattgtctccaattttgctgtattatacg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 275249 190 - 81552678 TTAAATAAAATTGGGTTCTCACTGCATGCACTGCTTGCTGG-TTTTTTAAACCACAATGTAC-TTTCCCACATTATTAAAGGTCTTTGAAAATACGattttaaactataacttagtattctgaatacaatacgctttaccgtctccctgtttggaagcgcacggattgtttccagttttgttctattacaca i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 203219 181 + 80997621 ctaaataaaactgggtttttactacatacactgcttgctgg-tttttttaaccacattgtacttttcccacactatgaaagttctttaacaataggattttaaacggtaacttggtattctgaatacaacaggctttaccatcttcctg-tggggggcacacggcttgtttccaattttccTC--------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189065 182 + 74645514 CTAAATAAAACTGGGTTCTTACTACATACACTGCTTGCTGGttttttttAACCACATTGTACTTTTCCCACATTATGAAAGTTCTTTAACAATAGGATTTTAAACAGTAACTTGGTATTCTGAATACAATAGGCTTTACCATCTTCCTG-TGGGGGGCACACGGCTTGTTTCCAATTTTCCTC--------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 996109 189 - 1291538 TTAAATACAAGTGGGTTTGTACCACATACACTGCTTGCTGG-CTTCTT-AACCACATTGTAC-TTTTCCACATTATTCAAGTTATTTACAAATACAATTTTGAACTGTAACTTCGTATTCTGAATGtactatatgtcaccgttttcctgtttgggagcacagagactgtctccagttttgctctattatatg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917179 114 + 122082543 --------ATTCGGGCTACTACTA------------------TCC------------TGTGC-TTCCC---------AAAACCCCTTAGCGCTGTGACTTTATGATTGTACT--GTATTGTAGACATAGT-----TCATCG---------CTGGGA------------CTTCTGAGTTTTCTT--ACATACT i mm10.chr11 C 0 C 0 s canFam3.chr9 15747190 178 - 61074082 TCAAATAAAATC-GATTCTCACTACACGTCCTGTTTGCTGT-TTTCTT--CTCACGCTgtac-tttctcacagtattaaaatttctcaaaaacatgggttttaattgtaacttagcattctgtat---------tttatcattttccttcttgggagcacacagattgtttccaattttgttctattatata i canFam3.chr9 C 0 I 190 e chlSab2.chr16 179106 146 + 75148670 I e rheMac3.chr16 194209 143 + 80904711 I a score=37993.000000 s hg38.chr17_GL383563v3_alt 305087 81 + 375691 cagcac-tgaaatggacatcctggcagat------------aaatctctgacgactgccttaggataagttcccaaaagggaaatGAA--GTGCAT s panTro4.chr17 280987 81 + 82630442 cagcac-tgaaatggacatcctggcagat------------aaatctctgacgactgccttaggataagttcccaaaagggaaatGAA--GCGCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160812 81 + 73212453 cagcac-taaaatggacatcctgggagat------------aaatctctgatgactgctttaggataagttcccaaaagggaaatGAA--GTACAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 275439 81 - 81552678 cagcac-tacagcggacatcctgggagat------------aaatctctgatgactgccttaggacaagttcccaaaagggaaatGAA--GTACAT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 203400 6 + 80997621 ------------------------------------------------------------------------------------------GTACAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189247 6 + 74645514 ------------------------------------------------------------------------------------------GTACAC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 996298 73 - 1291538 caacac-taagaaggatatcctgggagat------------aaacctctgatgacttcctcaggatgaacccccaagagagaaatG---------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917293 96 + 122082543 CAACACAAAAAatggctatccttcgagatctctcttggtacccatttctggtaacttccttaggagaaattctcaaaagAGATGTAGAGTGTGCAT i mm10.chr11 C 0 C 0 s canFam3.chr9 15747558 88 - 61074082 caacac-aaaaataggtatca-gggagatgaacctctgtgcctatctctgatcatttccttagtacaaattcctcaaagGCAAA------GTATAC i canFam3.chr9 I 190 C 0 e chlSab2.chr16 179106 146 + 75148670 I e rheMac3.chr16 194209 143 + 80904711 I a score=499224.000000 s hg38.chr17_GL383563v3_alt 305168 155 + 375691 ---TTTTTCAGTGTATTTTTTGAGATACCTTTTCCATAGTC--AGGTTCACAGCCACTCAAAGCTGTCAGCTGCAGGCCTCATGCTTGCTGTCTCCAAAGTGCACGTACAAGTGTCCACTACACAAA----TTCTGCTGGAG--------GCAGCTGTGTCTTGGTAGCCTA s panTro4.chr17 281068 155 + 82630442 ---TTTTTCAGCGTATTTTTTGAGATACCTTTTCCATAGTC--AGGTTCACAGCCACTCAAAGCTGTCAGCTGCAGGCCTCATGCTTGCTCTCTCCAAAGTGCACCTAAAAGTGTCCACCACAGAAA----TTCTGCTGGAG--------GCAGCTGTGTCTTGGTAGCCTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 160893 155 + 73212453 ---TTTTTAAGTGTATTTTTTGAGATACCTTTTCCATAGTC--ATGTTCTCAGCCACTCAAAGCCGTCAGCTGCAGGCCTCACGCTTGCTCTCCCCAAAGTGCACCTAAAATTGTCCACTACATAAA----TTCTGCTAGAC--------GCAGCTGTGTCTTGGTAGCCTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 275520 155 - 81552678 ---TTTTTAAGTGTATTTTCTGAGATATCTTTTCCATAGTC--ACGTTCACAGCCACTCAAAGCTGTCAGCTGCAGGCCTCATGCTTGCTCTCTCCAAAGTGCACCTAAAATTGTCCACTACAAATA----TTCCGCTGGAG--------GCAGCTGTGTCTTGGTAGCCTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 194352 155 + 80904711 ---TTTTTAAGTGTATTCTTTGAGATACCTTTTCCACAGCC--ACGTTCACAGCCACTCAGAGCTGTCCGCGGCAGGCCTCATGCTTGCCCTCTCCAAAGTGCACCTAGAATTGTCCGCCACAAAAA----TTCTGCTGGCG--------GCAGCCGCGTCTTGGGAGCCTA i rheMac3.chr16 I 143 C 0 s macFas5.chr16 203406 155 + 80997621 ---TTTTTAAGTGTATTCTTTGAGATACCTTTTCCACAGCC--ACGTTCACAGCCACTCAGAGCTGTCCGCGGCAGGCCTCATGCTTGCCCTCTCCAAAGTGCACCTAGAATTGTCCGCCACAAAAA----TTCTGCTGGCG--------GCAGCCGCGTCTTGGGAGCCTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189253 155 + 74645514 ---TTTTTAAGTGTATTCTTTAAGTTACCTTTTCCACAGCC--ACGTTCACAGCCACTCAGAGCTGTCCGCGGCAGGCCTCATGCTTGCCCTCTCCAAAGTGCACCTAGAATTGTCCACCACAGAAA----TTCTGCTGGCG--------GCAGCCGCGTCTTGGGAGCCTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 179252 155 + 75148670 ---TTTTTAAGTGTATTTTTTGAGATACCTTTTCCACAGCC--ACGTTCACAGCCACTCAGAGCTGTCCGCGGCAGGCCTCGTGCTTGCCCTCTCCAAAGTGCACCTAGAATTGTCCGGCACAAAAA----TTCTGCTGGCG--------GCAGCCGCGTCTTGGGAGCCTA i chlSab2.chr16 I 146 C 0 s calJac3.chrUn_GL286409 996371 144 - 1291538 --------CAGTGCATTTTTTGGGGT-TCGTTTTCATAGTCATATGCTTACAGCCGCTCAGAGCTGTCAGATGCGTGTCTCACACCTGCTCCCTC-------CACCTAAAATTGTCCACCACAAAAA----TTCTGCCAGAG--------GCAGCTGTGTCTTGGCAGCCTA i calJac3.chrUn_GL286409 C 0 I 363 s mm10.chr11 75917389 159 + 122082543 ---TTTTGGGAAACACATTTTGAGTCAGCTCTTCTACGGGA--GTGTTCTCAGCCACTCAAAGCTGTGAGCTGTGGGCCTCTTGCCTGCTCTCTCTAAAGTGAGTCTAGAATTGTTCATCAGGAAAAAAATATCTGTTGGAG--------GCAGCTGGGTCCTGTCAGCCTA i mm10.chr11 C 0 I 7 s canFam3.chr9 15747646 160 - 61074082 TTTTTCTCTAATATATTGTTGAAGCAACTTTTACCACATTG--ACATTTATAGCCGCTCAAAGCCATCACTCACGGGCCTCA-GCCTACTCTCTTGAAGGTGCTTCTAGAATGGTCCACTTC---------TTCTTGTAGTGACAGAGTTGTAGCTCTGTCTTATTGGCCTC i canFam3.chr9 C 0 C 0 a score=53308.000000 s hg38.chr17_GL383563v3_alt 305323 17 + 375691 ATCTGCGGATCTCCAAT s panTro4.chr17 281223 17 + 82630442 ATCTGTGGATCTCCAAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161048 17 + 73212453 ATCTGTAGATCTCCAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 275675 17 - 81552678 ATCTGTAGATCTCCAAT i nomLeu3.chr19 C 0 I 306 s rheMac3.chr16 194507 17 + 80904711 ATCTGTGGCTCTCCGAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 203561 17 + 80997621 ATCTGTGGCTCTCCGAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189408 17 + 74645514 ATCTGTGGCTCTCCGAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 179407 17 + 75148670 ATCTGTGGCTCTCCAAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 996878 17 - 1291538 ATCTGTAGATCTCCAAT i calJac3.chrUn_GL286409 I 363 C 0 s mm10.chr11 75917555 17 + 122082543 TTTTGTGGTTTTTGAAA i mm10.chr11 I 7 I 10 s canFam3.chr9 15747806 15 - 61074082 --ATGCGGATTTTGTAT i canFam3.chr9 C 0 C 0 a score=98087.000000 s hg38.chr17_GL383563v3_alt 305340 42 + 375691 ------------------------------------------------TAGATGGTTTCAATAAGGCAG---ACGATCCTCTATTCGC-aaaaa s panTro4.chr17 281240 43 + 82630442 ------------------------------------------------TTGATGGTTTCAATAAGGTAG---ACGATCCTCTATTCCCCaaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161065 42 + 73212453 ------------------------------------------------TAGATGGTTTCAATAAGGTAG---ACGATCCTCTATTCGC-AAaaa i ponAbe2.chr17 C 0 I 2 s nomLeu3.chr19 275998 42 - 81552678 ------------------------------------------------TAGATGGTTTCAATAAGGTAG---GCGATCCTCTATTCAC-Aaaaa i nomLeu3.chr19 I 306 C 0 s rheMac3.chr16 194524 41 + 80904711 ------------------------------------------------TAGATGGTTTCAATAAGGTC----ACGACCCTCTAGTCac-aaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 203578 41 + 80997621 ------------------------------------------------TAGATGGTTTCAATAAGGTC----ACGATCCTCTAGTCac-aaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189425 41 + 74645514 ------------------------------------------------TAGATGGTTTCAATAAGGTC----ACGATCCTCTagtcac-aaaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 179424 41 + 75148670 ------------------------------------------------TAGATGGTTTCAATAAGGTC----ACGATCCTCTATTCAC-aaaaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 996895 42 - 1291538 ------------------------------------------------TAGACGGTTTCAATAATGTAG---ATGATCCTCTATCCGC-AAAAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917582 40 + 122082543 ------------------------------------------------TAGATAATTCCAATCACTTATCACACTACCCCCTGCCCCA------ i mm10.chr11 I 10 C 0 s canFam3.chr9 15747821 89 - 61074082 TTTCGATCCCAGGATTCCAAGATGGAAAAGCTTATCTGGAACACTCCCAAGTTGGTTTT-ATAATGCAC---ATAGTCCTGTAATCAC-TAAAA i canFam3.chr9 C 0 I 181 a score=296693.000000 s hg38.chr17_GL383563v3_alt 305382 132 + 375691 aataaataaat------aaaataaaat-aaaGGGCCTCTTCTTTGC-AAAC----AGTTGCATCTACTTAAAAGAAGGCTTCTATCTCCTTAACAGCATTTGTGGGCTCAGAAGCTGGTAAAGCCAGCACTGGCTTG-----AGAGCCC s panTro4.chr17 281283 131 + 82630442 aataaataaat------aaa-taaaat-aaaGGGCCTCTTCTTTGC-AAAC----AGTTGCATCTACTTAAAAGAAGGCTTCTATCTCCTTAACAGCATTTGTGGGCTCAGAAGCTGGTAAAGCCAGCACTGGCTTG-----AGACCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161109 131 + 73212453 aataaataaat------aaa-taaaAT-AAAGGGCCTCTTCTTTGC-AAAC----AGATGCATCTACTTAAAAGAAGGCTTCTATCTCCTTAACAGCATTTGTGGGCTCAGAAGCTGGTAAAGCCAGCACTGGCTTG-----AGAGCCC i ponAbe2.chr17 I 2 C 0 s nomLeu3.chr19 276040 117 - 81552678 ---aaataaat------aaa-taaaat-aaaGGGCCTCTTCTTTGC-AAAC----AGTT-----------AAAGAAGGCTTCTATCTCCTTAACAGCATTTGTGAGCTCATTAGCTGGTAAAGCCAACACTGGCTTG-----AGAGCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 194565 123 + 80904711 -acaaacaaac------aaa-caaac----aaaGTCTATTCTTCGC-AAAC----AGTTGCATCTACTGACAAGAAGCCTTCTATCTCCTCAGCAGCAGTTGTGGGCTCAGAGGCTGGTAA----AGCACCGGCTTG-----AGAGCCC i rheMac3.chr16 C 0 I 63 s macFas5.chr16 203619 127 + 80997621 -acaaacaaac------aaa-caaac----aaaGTCTATTCTTCGC-AAAC----AGTTGCATCTACTGACAAGAAGCCTTCTATCTCCTCAGCAGCAGTTGTGGGCTCAGAGGCTGGTAAAGCCAGCACCGGCTTG-----AGAGCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189466 128 + 74645514 -acaaacaaac------aaa-caaac---aaaagtctctTCTTTGC-AAAC----AGTTGCATCTACTGACAAGAAGCCTTCTATCTCCTCAGCAGCAGTTGTGGGCTCAGAGGCTGGTAAAGCCAGCACGGGCCTG-----AGAGCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 179465 130 + 75148670 -aaataaaaaca----aaaa-taaac---aaaaaTCTCTTCTTTGC-AAAC----AGTTGCATCTACTGACAAGAAGCCTTCTCTCTCCTCAGCAGCAGTTGTGGGCTCAGAGCCTGGTAAAGCCAGCACCGGCTTG-----AGAGCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 996937 125 - 1291538 -AAAAA-----------AAA-GGGGGG-GGGGTGCCTTTTCTTTGC-AAACAGATAGTTGCATCTCCTT----GAAGGCATCTAACTCCTTCACAGCCTTTGTGGGCTCAGAAGTGGGTAAAGTCAGCACTGGCTGT-----AGGGCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917622 90 + 122082543 -----------------AAG----------------TCCTCTCTGCAAAAT----CTTTGCATCTACTTT---AAAGGTTTCTGTCGGTTT-------------GACTCAGA-GTTGGTAGGACCAGTGCTGGCTTG-----AGCATCT i mm10.chr11 C 0 I 7 s canFam3.chr9 15748091 142 - 61074082 aaaaaataaataaaataaaa-taaaataaaaAGGTCTCCTCTCCAC-AAAC----ATTCATATCTACTTGAAAGAAACCTTCTGCC-CCTTAAAGGGTTTCATGCGCTCAGAATCCAGTAGAGTGAACACAGAGCTGAACACAGAGCCC i canFam3.chr9 I 181 C 0 a score=10125.000000 s hg38.chr17_GL383563v3_alt 305514 10 + 375691 TGAGTGA-CCA s panTro4.chr17 281414 10 + 82630442 TGAGTGA-CCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161240 11 + 73212453 TGAGCGACCCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276157 11 - 81552678 TGAGTGACCCA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 203746 10 + 80997621 CGAGTGACCC- i macFas5.chr16 C 0 I 1 s papAnu2.chr16 189594 10 + 74645514 CGAGTGACCC- i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 179595 10 + 75148670 CGAGTGACCC- i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 997062 10 - 1291538 TGAGTTACCC- i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75917719 6 + 122082543 TGAATG----- i mm10.chr11 I 7 C 0 s canFam3.chr9 15748233 10 - 61074082 CAAGTGACCC- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 194688 63 + 80904711 I a score=132511.000000 s hg38.chr17_GL383563v3_alt 305524 49 + 375691 GTGGCTGGGGCCGGTCACATGAC-ACCCCTCCAGCCGA---CTGTTCCCCGCC s panTro4.chr17 281424 49 + 82630442 GTGGCTGGGGCCGGTCACATGAC-ACCCCTCCAGCCGA---CTGTTCCCTGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161251 49 + 73212453 GTGGCTGGGACCGGTCACATGAC-ATCCCTCCAGCCGA---CTGTTCTCCACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276168 49 - 81552678 GTGGCTGGGGCTGGTCACATGAC-ACCCCTCCAGCCGA---CTGTTCCCCACC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 194751 48 + 80904711 GTGGCTGGGGCCGGTCACGTGAC-CCTCCTCCAG-CGA---CTCTTCTCCGCC i rheMac3.chr16 I 63 C 0 s macFas5.chr16 203757 48 + 80997621 GTGGCTGGGGCCGGTCACGTGAC-CCTCCTCCAG-CGA---CTCTTCTCCGCC i macFas5.chr16 I 1 C 0 s papAnu2.chr16 189605 48 + 74645514 GTGGCTGGGGCCGGTCACGTGAC-CCTCCTCCAG-CGA---CTGTTCTCCGCC i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 179606 48 + 75148670 GTGGCTGGGGCCGGTCACATGAC-CCTCCTCCAG-CGA---CTGTTCTCCGCC i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 997073 53 - 1291538 ATGGCTGGGGCTGGTCACATGGTGCCCCCTCCAGCAGAATGCTCTTCTCCGCC i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75917725 35 + 122082543 --GGCCTTGGCAGGTACTGTAAC-AGCTAGCCAGCAGG--------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15748243 40 - 61074082 --------AGGTGGTCACAGAAC-ACCCCTCCAG-CCA---ATGTTCTCCTCC i canFam3.chr9 C 0 I 639 a score=572640.000000 s hg38.chr17_GL383563v3_alt 305573 272 + 375691 CC------GACTACAGGGTCCCGTAAAC---GGGCCTTGGGAGCTCATCCCCGTACAGGCTAGGAAGCAGTGCGCATAGTCATCACTCCAGGAGAACCGCGGCTCGACCCTGACCTTCCAAAACTCTCAG------CAGCCACAGCACAGTG---AGAAAAACAACAGCCGCCCGCAGCTGTCTGTCTCTAACACGTATCAGACTTTGAAAAACATATCCGGAGGCAAAACAA--CCTG-CCTCAGAGAAGCCCGGCAAACACCCACGGAGTCTCTAGCCCGTCCACTGCGGG s panTro4.chr17 281473 272 + 82630442 CC------GACTACAGGGTCCCGTAAAC---GGGCCTTGGGAGCTCATCCCCGTACAGGCTAGGAAGCAGTGCGCATAGTCATCACTCCAGGAGAACCGCGGCTCGACCCTGACCTTCCAAAACTCTCAA------CAGCCACAGCACAGTG---AGAAAAACACCAGCCGCCCGCAGCTGTCTGTCTCTAACACGTATCAGACTTTGAAAAACATATCCGGAGGCAAAACAA--CCTG-CCTCAGAGAAGCCTGGCAAACACCCACGGAGTCTCCAGCCCATCCACTGTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161300 279 + 73212453 CCGACT--GACTGCCGGGTCCCGTAAAC---GGGCCCTGGGAGCTCATCCCCGTACCTGCTAGGAAGCAGCGCGCATAATCATCACTCCAGGAAAACTGCGGCTCGACTCTGACCTTCCAAAACTCACAA------CAGCCACAGCACAGTGAAAAAAAAAACACCAGCCGCCTGCAGCTGTCTGTCTCTAACGTGTATCAGACTTTGAAAAACATACCCGGAGGCAAAACAA--CCTG-CCTCAGAGAAGCCTGGCAAACACCCACGGAGTCTCCAGCCCGTCCACTGCGGG i ponAbe2.chr17 C 0 I 6 s nomLeu3.chr19 276217 271 - 81552678 C-------GACTACAGGGTCCCGTAAAC---AGGCCTTGGGAGCTCGTCCCTGTACATATTAGGAAGCAGTGAGCATAGTCATCGCTCCAGGAAAACTGCGGCTCGACCCTGACCTTCCAAAACTCACAG------CAGCCACAGCACACTG---AGAAAAACACCAGCCGCCTGCAGCTGTCTGTCTCCAACATGTATCAGACTTTGAAAAACATATCCGGAGGCAAAACAA--CCTG-CCTCAGAGAAGCCTGGCAAACACCCACGGAGTCTCCAGCCCGTCCACTGCGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 194799 264 + 80904711 C-------GCCTGC-GGGTCCCGAAAAC---GTGCCTCGGGAGCTCGTTCCCGTCCGCACTAGGAGGCAGCGTGAATAGTCATCACTCCAGGAAAACT--GGCTCAACCCTGACCTTCCAAATCCCGCCA------CAGCCACAGCACAGTA---AGGAAAGCACCAGCCGCCTGCTGCCGTCAGTCTCTGACACACATCAGAC--TGAAAGACACATCCGGGGGCAAAACCA--CCTG-CCTCCAAGAAGCCTGG-AAACACCC-CGGAGTCCCCCGCGCGTCCGCTGCGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 203805 264 + 80997621 C-------GCCTGC-GGGTCCCGAAAAC---GTGCCTCGGAAGCTCGTTCCCGTCCGCACTAGGAGGCAGCGTGAATAGTCATCACTCCAGGAAAACT--GGCTCAACCCTGACCTTCCAAATCCCGCCA------CAGCCACAGCACAGTA---AGGAAAGCACCAGCCGCCTGCTGCCGTCAGTCTCTGACACACATCAGAC--TGAAAGACACATCCGGGGGCAAAACCA--CCTG-CCTCCAAGAAGCCTGG-AAACACCC-CGGAGTCCCCCGCGCGTCCGCTGCGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189653 250 + 74645514 C-------GCCTGC-GGGTCCCGAAAAC---GTGCCTCGGGAGCTCGTTCCCGTCCGCACTAGGACGCAGCGTGAATAGTCATCACTCCAGGAAAACT--GGCTCAACCCTGACCTTCCAAATCCCACCA------CAGCCTCAGCACAGTG---AGGAAAACACCAGCCGCCTGCAGCCGTCAGTCGCTGACACACATCAGAC--TGAAAGACACATCCGGGGGCAAAACCA--CCTG-CCTCCAAGAAGCCTGG-AAACA---------------GCGCGTCCGCTGCGGc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 179654 267 + 75148670 C-------GCCTGC-GGGTCCCGTAAACTTAGTGCCTCGGGAGCTCGTTCCCGTACACACTAGGAAGCAGCGTGAATAGTCATCACTCCAGGAAAACT--GGCTCAACCCTGACCTTCCAAAACCCACCA------CAGCCACAGCACAGTG---AGGAAAACACCAGCCGCCTGCAGCCGTCAGTCTCTGACACACATCAGAC--TGAAAAACACATCCGGAGGCAAAACCA--CCTA-CCTCCAAGAAGCCTGC-AAACACCC-CGGAGTCCCCAGCGCGTCCACTGCGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 997126 270 - 1291538 CCAACTGCGAATGC-GGGTCCCAGAAAC---------TTGGAGCTCACTCCCATAAGTGCTAGAAAGCAGCACAGATAGTCGTCACTCCAGGAAAACTGCTGCTTGACCATGACCTTCCAAAACTCACAA------CGGCCACAGCACAGTA---TAAGAAACGGCAGCCGCCTGCC-CTGTCTGTCTCTACCACGTATCACACTTTGAAAATCACGTCTGAGAGCAAAACCA--CCTGCCCTTAGAGAAGCCGGGCAAACGCCCATGGAGTCTCCAACCCA-CCACCTCGGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917760 173 + 122082543 --------G------TGGTCTATAAAAA---GGAGTTTGG------------------ACTAGGGGTGTGGCTCAATGGTAA--AACACAGGAATAAG--------ACCCTTAACTCCCAGCACCATAAAAACAAGCAGGCAAACCA-AGAG---GGAAAAAC-----------------------------------TCAGA---TAAAA---------GGGGGGAGGGCTGACCCTG-TCTAAAAAAAGCCCTT---------------CCCACCACTGGTCC-------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I a score=5600.000000 s hg38.chr17_GL383563v3_alt 305845 2 + 375691 GG s panTro4.chr17 281745 2 + 82630442 GG i panTro4.chr17 C 0 I 83 s ponAbe2.chr17 161585 2 + 73212453 GG i ponAbe2.chr17 I 6 C 0 s nomLeu3.chr19 276488 2 - 81552678 GG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 204069 2 + 80997621 gg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189903 2 + 74645514 gg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 179921 2 + 75148670 gg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 997396 2 - 1291538 GG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75917933 0 + 122082543 C e canFam3.chr9 15748283 639 - 61074082 I e rheMac3.chr16 195063 0 + 80904711 C a score=25388.000000 s hg38.chr17_GL383563v3_alt 305847 9 + 375691 GACAGGGAC s panTro4.chr17 281830 9 + 82630442 GACAGGGAC i panTro4.chr17 I 83 C 0 s ponAbe2.chr17 161587 9 + 73212453 GACAGGGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276490 9 - 81552678 GACAGGGAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195063 5 + 80904711 ----GGGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 204071 9 + 80997621 gacagggac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189905 9 + 74645514 gacagggac i papAnu2.chr16 C 0 I 31 s chlSab2.chr16 179923 9 + 75148670 gacagggac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 997398 9 - 1291538 GACGAGGAC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917933 7 + 122082543 --TGGGGTT i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I a score=1352.000000 s hg38.chr17_GL383563v3_alt 305856 6 + 375691 --AAGGCA s panTro4.chr17 281839 6 + 82630442 --AAGGCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161596 6 + 73212453 --AAGGCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276499 6 - 81552678 --AAGGCA i nomLeu3.chr19 C 0 I 346 s calJac3.chrUn_GL286409 997407 6 - 1291538 --AAAACC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75917940 6 + 122082543 CTGATG-- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e chlSab2.chr16 179932 0 + 75148670 C e papAnu2.chr16 189914 31 + 74645514 I e rheMac3.chr16 195068 0 + 80904711 C e macFas5.chr16 204080 0 + 80997621 C a score=23367.000000 s hg38.chr17_GL383563v3_alt 305862 41 + 375691 ACCACCCCAGCAAGTGCAGCTCCTTCTCCCCACGCCTTCTC s panTro4.chr17 281845 41 + 82630442 ACCACCCCAGCAAGTGCAGCTCCTTCTCCCCACACCTTCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161602 41 + 73212453 ACCACCCCAGCAAGTGTGGCTCCTTCTCCCCATGCCTGCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276851 38 - 81552678 ACCACCC---CAAGTGCAGCTCCTTCTCCCCACACCTTCCC i nomLeu3.chr19 I 346 C 0 s calJac3.chrUn_GL286409 997413 38 - 1291538 ACTACCCCAGCAGGGGCAGCTCCTT---CCCACACCTTCTC i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75917946 20 + 122082543 ACCCCCCAA---------------TCTCCTAACTC------ i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e chlSab2.chr16 179932 0 + 75148670 C e papAnu2.chr16 189914 31 + 74645514 I e rheMac3.chr16 195068 0 + 80904711 C e macFas5.chr16 204080 0 + 80997621 C a score=1638.000000 s hg38.chr17_GL383563v3_alt 305903 6 + 375691 CGAGGG s panTro4.chr17 281886 6 + 82630442 CGAGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161643 6 + 73212453 CCAGGG i ponAbe2.chr17 C 0 T 89 s nomLeu3.chr19 276889 6 - 81552678 CCCGGG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75917966 0 + 122082543 C e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 179932 0 + 75148670 C e papAnu2.chr16 189914 31 + 74645514 I e rheMac3.chr16 195068 0 + 80904711 C e macFas5.chr16 204080 0 + 80997621 C a score=3557.000000 s hg38.chr17_GL383563v3_alt 305909 19 + 375691 CCAGCCCATCCACTGCGGA s panTro4.chr17 281892 19 + 82630442 CCAGCCCATCCACTGCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161560 19 + 73212453 CCAGCCCGTCCACTGCGGG i ponAbe2.chr17 T 89 C 0 s nomLeu3.chr19 276895 19 - 81552678 CCAGCCCGTCCACTGCGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195068 1 + 80904711 -----------A------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 204080 1 + 80997621 -----------a------- i macFas5.chr16 C 0 C 0 e mm10.chr11 75917966 0 + 122082543 C e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 179932 0 + 75148670 C e papAnu2.chr16 189914 31 + 74645514 I a score=11054.000000 s hg38.chr17_GL383563v3_alt 305928 14 + 375691 ----GGGACAGGAACAAG s panTro4.chr17 281911 14 + 82630442 ----GGGACAGGGACAAG i panTro4.chr17 C 0 T 178 s ponAbe2.chr17 161579 8 + 73212453 ----GGGACAGG------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276914 8 - 81552678 ----GGGACAGG------ i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195069 14 + 80904711 ----GGGACAGGGACAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 204081 14 + 80997621 ----gggacagggacagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 189945 14 + 74645514 ----gggacggggacggg i papAnu2.chr16 I 31 C 0 s mm10.chr11 75917966 11 + 122082543 ACCAGAAATAG------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 179932 0 + 75148670 C a score=88792.000000 s hg38.chr17_GL383563v3_alt 305942 61 + 375691 GACAGGGACAAGGCAACCACCCCACCCAGTGCAGCTCCTTCT-CCCCACGCCTTCCCCCAGG s panTro4.chr17 281747 61 + 82630442 GACAGGGACAAGGCAACCACCCCACTAAGTGCGGCTCCTTCT-CCCCACGCCTTCCCCCAGG i panTro4.chr17 T 178 C 0 s ponAbe2.chr17 161587 61 + 73212453 GACAGGGACAAGGCAACCACCCCAGCAAGTGTGGCTCCTTCT-CCCCATGCCTGCCTCCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276922 58 - 81552678 GACAGGGACAAGGCCACCACCCCA---AGTGCAGCTCCTTCT-CCCCACACCTTCCCCCCGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195083 61 + 80904711 GAGGGGGACGGGGCGACCATCCCACCACGTGCGGCTTCTTCT-CCCCACACCTTCCCCCAGG i rheMac3.chr16 C 0 I 5 s macFas5.chr16 204095 61 + 80997621 gaGGGGGACGGGGCGACCATCCCACCACGTGTGGCTTCTTCT-CCCCACACCTTCCCCCAGG i macFas5.chr16 C 0 T 106 s papAnu2.chr16 189959 61 + 74645514 gacggggacggggCGACCATCCCACCACGTGCGGCTTCTTCT-CCCCACACCTTCCCCCAGG i papAnu2.chr16 C 0 T 135 s mm10.chr11 75917977 50 + 122082543 GTCAGG---ATGGAAACCA-CCCATCA---GCAGCTGTCTCTGACACGTATCATACC----- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 179932 0 + 75148670 C a score=1200.000000 s hg38.chr17_GL383563v3_alt 306003 2 + 375691 GC s panTro4.chr17 281808 2 + 82630442 GC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161648 2 + 73212453 GC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276980 2 - 81552678 GC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75918027 0 + 122082543 C e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 179932 0 + 75148670 C e papAnu2.chr16 190020 135 + 74645514 T e rheMac3.chr16 195144 5 + 80904711 I e macFas5.chr16 204156 106 + 80997621 T a score=13383.000000 s hg38.chr17_GL383563v3_alt 306005 17 + 375691 CAGCCCGTCCACTGTGG s panTro4.chr17 281810 17 + 82630442 CAGCCCATCCACTGTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161650 17 + 73212453 CAGCCCGTCCACTGTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 276982 17 - 81552678 CAGCCCGTCCACTGTGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 189885 17 + 74645514 CAGCGCGTCCGCTGCGG i papAnu2.chr16 T 135 C 0 s mm10.chr11 75918027 3 + 122082543 --------------TGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 179932 0 + 75148670 C e rheMac3.chr16 195144 5 + 80904711 I e macFas5.chr16 204156 106 + 80997621 T a score=681.000000 s hg38.chr17_GL383563v3_alt 306022 1 + 375691 A s panTro4.chr17 281827 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161667 1 + 73212453 A i ponAbe2.chr17 C 0 T 89 s nomLeu3.chr19 276999 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 189902 1 + 74645514 c i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 179932 1 + 75148670 a i chlSab2.chr16 C 0 C 0 s mm10.chr11 75918030 1 + 122082543 A i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e rheMac3.chr16 195144 5 + 80904711 I e macFas5.chr16 204156 106 + 80997621 T a score=14327.000000 s hg38.chr17_GL383563v3_alt 306023 27 + 375691 Gggacagggacaaggacagggacaagg s panTro4.chr17 281828 15 + 82630442 GGGACAGGGACAAGG------------ i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161579 21 + 73212453 GGGACAGGGACAGGG------ACAAGG i ponAbe2.chr17 T 89 C 0 s nomLeu3.chr19 277000 21 - 81552678 GGGACAGGGACAGGG------ACGAGG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 189903 27 + 74645514 gggacagggacggggacggggacaggg i papAnu2.chr16 C 0 I 21 s chlSab2.chr16 179933 27 + 75148670 gggacatggacagagacagggacGGGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75918031 8 + 122082543 -------GAGCAAGA------------ i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e rheMac3.chr16 195144 5 + 80904711 I e macFas5.chr16 204156 106 + 80997621 T a score=32096.000000 s hg38.chr17_GL383563v3_alt 306050 49 + 375691 CAACCACCCCC------AGCAAGTGCGGCTCCTTCTCCCCACGCCTTCCCCCAGG s panTro4.chr17 281843 48 + 82630442 CAACCACCCC-------AGCAAGTGCAGCTCCTTCTCCCCACACCTTCTCCGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161600 48 + 73212453 CAACCACCCC-------AGCAAGTGTGGCTCCTTCTCCCCATGCCTGCCTCCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277021 48 - 81552678 CCACCACTCC-------AGCAAGTGTGGCTCCTTCTCCCCACGCCTTCCCCCCGG i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 179960 48 + 75148670 CGACCATCCC-------ACCACGTGCGGCTTCTTCTCCCCACACCTTCCCCCAGG i chlSab2.chr16 C 0 I 5 s mm10.chr11 75918039 38 + 122082543 CAGCCTGTCCTTCCAGAAGCAAG-----------------ACACACTCACCAAGG i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e papAnu2.chr16 189930 21 + 74645514 I e rheMac3.chr16 195144 5 + 80904711 I e macFas5.chr16 204156 106 + 80997621 T a score=-1240.000000 s hg38.chr17_GL383563v3_alt 306099 1 + 375691 -G s panTro4.chr17 281891 1 + 82630442 -G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161648 1 + 73212453 -G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277069 1 - 81552678 -G i nomLeu3.chr19 C 0 C 0 s mm10.chr11 75918077 1 + 122082543 C- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 180008 5 + 75148670 I e papAnu2.chr16 189930 21 + 74645514 I e rheMac3.chr16 195144 5 + 80904711 I e macFas5.chr16 204156 106 + 80997621 T a score=10133.000000 s hg38.chr17_GL383563v3_alt 306100 19 + 375691 CCAGCCCATCCACTGCGGA s panTro4.chr17 281892 19 + 82630442 CCAGCCCATCCACTGCGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161649 19 + 73212453 CCAGCCCGTCCACTGTGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277070 19 - 81552678 CCAGCCAGTCCACTGTGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 204050 19 + 80997621 CCCGCGCGTCCGCTGCGAC i macFas5.chr16 T 106 I 18 s mm10.chr11 75918078 12 + 122082543 CTGGCCCTATCA------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 180008 5 + 75148670 I e papAnu2.chr16 189930 21 + 74645514 I e rheMac3.chr16 195144 5 + 80904711 I a score=42985.000000 s hg38.chr17_GL383563v3_alt 306119 54 + 375691 GGGACAGGGACAGGGACAAGGCAACCACCCCAGCAAGTGCGGCTC----------CTCCTTCTT s panTro4.chr17 281911 48 + 82630442 GGGACAGGGACA------AGGCAAGCACCCCACCCAGTGCGGCTC----------CACCTTCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161668 54 + 73212453 GGGACAGGGACAGGGACAAGGCAACCACCCCACCAAGTGTGGCTC----------CACCTTCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277089 54 - 81552678 GGGACAGGGACAGGGACAAGGCCACCACCCCAGCAAGTGCGGCTC----------CACCTTCTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 204087 64 + 80997621 gggacagggaGGGGGACGGGGCGACCATCCCACCACGTGTGGCTTCTTCTCCCCACACCTTCCC i macFas5.chr16 I 18 C 0 s papAnu2.chr16 189951 64 + 74645514 gggacggggacggggacggggCGACCATCCCACCACGTGCGGCTTCTTCTCCCCACACCTTCCC i papAnu2.chr16 I 21 C 0 s mm10.chr11 75918090 33 + 122082543 --GGCCGGGAAGGTCACAGGACA--------AGCAGAGGCAGA--------------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e calJac3.chrUn_GL286409 997451 1 - 1291538 I e chlSab2.chr16 180008 5 + 75148670 I e rheMac3.chr16 195144 5 + 80904711 I a score=10311.000000 s hg38.chr17_GL383563v3_alt 306173 5 + 375691 CCAGG s panTro4.chr17 281959 5 + 82630442 CCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161722 5 + 73212453 CCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277143 5 - 81552678 CCAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 204151 5 + 80997621 CCAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 190015 5 + 74645514 CCAGG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 997452 5 - 1291538 CCAGG i calJac3.chrUn_GL286409 I 1 C 0 e mm10.chr11 75918123 0 + 122082543 C e canFam3.chr9 15748283 639 - 61074082 I e chlSab2.chr16 180008 5 + 75148670 I e rheMac3.chr16 195144 5 + 80904711 I a score=1000.000000 s hg38.chr17_GL383563v3_alt 306178 1 + 375691 G s panTro4.chr17 281964 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161727 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277148 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 997457 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75918123 0 + 122082543 C e canFam3.chr9 15748283 639 - 61074082 I e chlSab2.chr16 180008 5 + 75148670 I e papAnu2.chr16 190020 0 + 74645514 C e rheMac3.chr16 195144 5 + 80904711 I e macFas5.chr16 204156 0 + 80997621 C a score=6382.000000 s hg38.chr17_GL383563v3_alt 306179 5 + 375691 CTGTG s panTro4.chr17 281965 5 + 82630442 CTGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161728 5 + 73212453 CCGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277149 5 - 81552678 CCGTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 204156 5 + 80997621 CCGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 190020 5 + 74645514 CTGCG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 997458 5 - 1291538 CCGTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918123 3 + 122082543 --ATG i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I e chlSab2.chr16 180008 5 + 75148670 I e rheMac3.chr16 195144 5 + 80904711 I a score=742435.000000 s hg38.chr17_GL383563v3_alt 306184 300 + 375691 ATCGCTCCCCACCTTACACCCTGGCATT-TTCACCTCTTCGATCTTGTTTCAGGGACACGTTCACTGATATAACTGAGGCTTCAGACTCCT-AGGGTGTGGCACGAACGAGCGCGC-TTTCATCCAGCCACAGGGTCCGACCCACGGTGAGCGTGGGCAGCATACCCGAGCTCCTGAGACCAGCAGATATGCTTGGCTGGGG-----------------------------------------------ACGCATTCCCAAGAGCACAGCCACACTGTGACCCCC-GAGCGACTGTGACAAAGGGGG-CCCGGGTATGAGGGTGCAGGTGTCC-------GGGTGAGATTATCTCTATG s panTro4.chr17 281970 300 + 82630442 ATCGCTCCCCACCTTACACCCTGGCATT-TTCACCTCTTCGATCTTGTTTCAGGGACACGTTCACTGATATAACTGAGGCTTCAGACTCCT-AGGGTGTGGCACGAACGAGCGCGC-TTTCATCCAGCCACAGGGTCCGACCCAAGGTGAGCGTGGGCAGCAGACCCGAGCTCCTGAGACCAGCGGATATGCTTGGCTGGGG-----------------------------------------------ACACATTCCCAAGAGCACAGCCACACCGTGACCCCC-GAGCGACTGTGACAAAGGGGG-CCCGGGTATGAGGGTGCAGGTGTCC-------GGGTCAGACTATCTCTATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 161733 339 + 73212453 ATCGCTCCCCACCTTACACCCTGGCATT-TTCACCTCTTCGATCTTGTTTCAGGGACACGTTCACTGATATAACGGAGCCTTCAGACCCCCGAGGGTGTGGCACGAA--AGAGCGC-TTTCATCCAGCCACAAAGTCCGACCCACAGTGAGCATGGGCAGCAGATCCGAGCTCCTGAGACCAGCGGATTTGCTTGGCTGGGGTCTGCCTTGAAGTCGTGAG--------CATGAGACACCCCCAGAGAAACGCATTCCCAAGAGCGCGGCCACACCGTGACCCCC-GAGCGACTGTGACAAAGGAGGCCCCGGGTATGAGGGTGCGGGTGTCC-------AGGTCAGACCATCTCTACG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277154 329 - 81552678 ATCGCTCCCCACCTCACACCCTGGCATT-TTCACCTCTTCGATCTTGTTTCAGGGACACGTTCACTGATACAACGGAGCCTTCAGACTCCCTAGGGTGTGGCACGAATGAGCGCAC-TTTCACCCAGCCACAAAGTCCGACCCGTGGTGAGCGTCGGC----------AGCCCCTGAGACCAGCGGATCTGCTTGGCTGGGGTCTGCCTTGAAGTCGTGAG--------CATGAGACACCCCCAGAGAAACGCATTCCCAAGGGCACGGCCACACCGTGACCCCC-GAGCGACTGTGAC-AAGGAGG-CCCGGGGATGAGGGTGTGGGTGTCC-------AGGACAGACCATCTCCACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195149 338 + 80904711 ATCGCTCCCCACCTTACACCCTGGCATT-TTCACCGCCTCCATCTCGTTTCACGGACACGTTCG--GATGTAACTGAGCCTTCACACTCCCTCGGGTACGGCACGAACGAGCGCCC-TTTCGTCCAGCCACAGGGTCCCACCCGTGGGGAGAGTGGGCAGCAGATCCCAGCTCCTGAGACCCGCGGATCTGCTTGGCCGGGGTCTGCCTTGAAGTCACGCG--------CATGAGAGACCCCCAGAGAAAAGCATTCCCACGGGCACGGCCACGCTGTGACTCGG-GGGCGACGGTGGCAGAGGAGG-CCCGGGGATGAGGGCGCAGGTGTCC-------GGCACAGACCGTCTCCATG i rheMac3.chr16 I 5 C 0 s macFas5.chr16 204161 331 + 80997621 ATCGCTCCCCACCTTACACCCTGGCATT-TTCACCGCCTCCATCTCGTTTCACGGACACGTTCG--GATGTAACTGAGCCTTCACACTCCCTCGGGTACGGCACGAACGAGCGCGC-TTTCGTCCAGCCACAGGGTCCCA-CCGTGGGGAGAGTGGGCAGCAGATCCCAGCTCCTGAGACCCGCGGATCTGCTTGGCCGGGGTCTGCCTTGAAGTCACGCG--------CATGAGAGACCCCCAGAGAAACGCATTCC------CACGGCCACGCTGTGACTCGG-GGGCGACGGTGGCAGAGGAGG-CCCGGGGATGGGGGCGCAGGTGTCC-------GGCACAGACCGTCTCCATG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 190025 337 + 74645514 ATCGCTCCCCACCTTACACCCTGGCATT-TTCACCGCCTCGATCTCGTTTCACGGACACGTTCG--GATGTAACTGAGCCTTCACACTCCCTCGGGTGCGGCACCAACAAGCGCGCTTTTCGTCCAGCCACAGGGCCCCACCCGTGGGGAGA--GGGCAGCAGATCCCAGCCCCTGAGACCCGCGGATCTGCTTGGCCGGGGTCTGCCTTGAAGTCACGTG--------CATGAGAGACCCCCAGAGAAACGCATTCCCACGGGCACGGCCACGCTGTGACTCGG-GGGCGACGGTGGCAGAGGAGG-CCGGGGGATGAGGGCGCAGGTGTCC-------GGCACAGACCGTCTCCACG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 180013 338 + 75148670 ATCGCTCCCCACCTTACACCCTGGCATT-TTCACCGCCTCCATCTCGTTTCACGGACACGTTCA--GATGTAACTGAGCCTTCACACTCTCCCAGGTGTAGCACGAACGAGCGCGC-TTTCGTCCAGCCACAGAGTCCCACCCGTGGGGAGAGCGGGCAGCAGATCCCAGCTTCCGAGACCAGCGGATCTGCTTGGCCGGGGTCTGCCTTGAAGTCACGCG--------CATGAGAGACCCCCAGAGAAACGCATTCCCACGGGCATGGCCACGCTGTGACTCAG-GGGCGACGGTGGTGGAGGAGG-CCTGGGGATGAGGGCACAGGTGTCC-------GGCACAGACCGTCTCCACG i chlSab2.chr16 I 5 C 0 s calJac3.chrUn_GL286409 997463 347 - 1291538 ATGGCTCCCAACCTCATGCCCTGGCACT-TTTACCTCCTTGATCTTATTTCAAGGACACATTCA-TGATAGAACTGGGTCTTCAGACTCCCTAGGGTGTGGCGTGAATGAGCGTGC-TTTCATCCAGCC-CGGGGTTCGACCCATGGTGAGAGCGGCCAGCAGACCCCAGCTCCTGAGACCAGCAGATTTGCTTGGGTGGGGTCTGCCTTGAAGTCACGAGCGTGACCCCATGAGAGACCCCCAGAGAAACGCATTTGCAAGAGAATGACCACACTGTGACCCCCAGGGTGCCTGTGACAATGAAAG-CCCAGGTACAAGGGTGCAGGCGTCC-------AGAACAGACCAACTCTATG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918126 215 + 122082543 CTCACTCTCAACCT---------GCAGTACTCAGCTCCTTGGTTTCTTTCCAGGGGGTTTTCAGCTGACACAATCAAACTTACGTATTCCAGAATGTTCAGCAAA------------CTCTAGCAAGAGACAGACTCTGA-------------------------------GCCCAAGACCAGCTGATATGCTTGGCCAGGGT-----------------------------------------------------------------------CTGTGTCTCAG-ATGGCATCACAAGTGAAGAGA-C------------------GTATCCCCACATTGGGCCTTATCATCTCCAT- i mm10.chr11 C 0 C 0 e canFam3.chr9 15748283 639 - 61074082 I a score=88000.000000 s hg38.chr17_GL383563v3_alt 306484 37 + 375691 GTGAGAATAAAGG-AAATGATGCAGGGTGAAC------------------------------------------AGTGGG s panTro4.chr17 282270 37 + 82630442 GTGAGAATAAAGG-AAATGATGCAGGGTGAAC------------------------------------------AGTGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162072 58 + 73212453 GTGAGAATAAAGG-AAATGATGCAGGGCGAAC---------------------GGTGCGAAGGAGGTGGCGGATGGTGGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277483 79 - 81552678 GTGAGAATAAAGG-AAATGAGGCAGGGCGGACGGTGGGAAGGAGGCGGCAGACGGTGGGAAGGAGGCGGCGGATGGCGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195487 37 + 80904711 GTGAGAATGAAGG-AAATGATGCAGGGCGCAC------------------------------------------AGTGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 204492 37 + 80997621 GTGAGAATGAAGG-AAATGATGCAGGGCGCAC------------------------------------------AGTGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 190362 37 + 74645514 GTGAGAATGAAGG-AAATGATGCCCGGTGCAC------------------------------------------CGTGGG i papAnu2.chr16 C 0 I 550 s chlSab2.chr16 180351 37 + 75148670 GTGAGAATGAAGG-AAATGATGCCCGGCGCAC------------------------------------------AGCGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 997810 31 - 1291538 GGGAGAAT------AAATGAT-CAGGGAGAAC------------------------------------------GGTGGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918341 32 + 122082543 GTGAGAAGAAAGGAAAACTATACAGGGGAAAC------------------------------------------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15748922 37 - 61074082 GTGGAAAGAGAAG-AAATGATACAGAGAAAAC------------------------------------------AGTGGG i canFam3.chr9 I 639 C 0 a score=316110.000000 s hg38.chr17_GL383563v3_alt 306521 159 + 375691 AAGGAGGCGG--CGGATGGAGGGGCTGGGGGAAGTCG-CTGTGCCTA----GGACACCCACGTGCGAAGGCCAACACC-AGC--------GCTGCAGGACGC--CAGTTGGTGTCGGCCACAGAGAGAG---GGCTCAAGTGCAT-------TTTCCACACCAGGGGTGGCTGGTGCCCTCTGAGCC s panTro4.chr17 282307 159 + 82630442 AAGGAGGCGG--CGGATGGAGGGGCTGGGGGAAGTCG-CTGTGCCCA----GGACACCCACGTGCGAAGGCCAACACC-AGC--------GCTGCAGGACGC--CAGTTCATGTCGGCCACAGAGAGGG---GGCTCAAGTGCAT-------TTTCCACACCAGGGGTGGCTGGTGCCCTCTGAGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162130 171 + 73212453 AAGGAGGCGG--CGGATGGAGGGGCTGGGGGAAGTCA-CTGTGCCTAGGAGGGACACCCACGTGCAAAGGCCAACACG-GGCCACCAGCAGCTGCAGGACGC--CAGTTCGTGTCGGCCACAGAGAGAG---GGCTCCAGTGCAT-------TTTCCACACCGGGGGTGGCTGGTGCCCTCTGAGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277562 171 - 81552678 AAGGAGGCAG--CGGATGGAGGGGCTGGGGGAAGTCG-CTGTGCCTAGGGGGGACACCCTCATGCGAAGGCCAACACG-GGCCACCAGCAGCTGCAGGATGC--CAGTTCTTGTCGGCGACAGAAACAG---GGCTCAAGTGCAT-------TTTCCACACCAGGGGTGGCCGGTGCCCTCTGAGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195524 167 + 80904711 AAAGAGGCAG--CGGATGGAGGGGCTGAGGGAAGCCG-CTGTGCCTAGGAGGGACAGCCCCGTGCAAAGGCCAACACG-GGCCACCAGCCGCTGCAGGACGC--CAGTTCCTGTTGGCCACAGAAAGAG---GGTTCAGGTGTGT-----------CACACCAGGGGTGGCTGGTGCCCTCGGAGCC i rheMac3.chr16 C 0 I 208 s macFas5.chr16 204529 167 + 80997621 AAAGCGGCAG--CGGATGGAGGGGCTGAGGGAAGCCG-CTGTGCCTAGGAGGGACAGCCCCGTGCAAAGGCCAACACG-GGCCACCAGCCGCTGCAGGACGC--CAGTTCCTGTTGGCCACAGAAAGAG---GGCTCAGGTGTGT-----------CACACCAGGGGTGGCTGGTGCCCTCTGAGCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 180388 171 + 75148670 AAAGAGGCGG--CGGATGGAGGGGCTGAGGGAAGCCG-CTGTGCCTAGGAGGGACACCCCCGTGCAAAGGCCAACACG-GGCCACCAGCCGCTGCAGGACGC--CAGTTCCTGTTGGCCACAGAAGGAG---GGCTCAGGTGCGT-------CTTCCACACCAGGGGCGGCTGGTGCCCTCTGAGCC i chlSab2.chr16 C 0 I 138 s calJac3.chrUn_GL286409 997841 166 - 1291538 AAAGAGACGG--CGGACACA-GGGCTGGAGGAGGCTG-CTGTGCCCGAGAGGGATGCCCACACACAAA-GCCAATAT---GCCACCAGCAGCTGCAGGAAAC--CAGGTCCTGTCAGCCGCAGAGAGAG---GGCCCAGGTGTGT-------CTTCCACGAGAGGGGCAGTGGGTGTCCTCTGACC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918373 137 + 122082543 CAGAAAGAGG--CAGGCACAGGGGAAGAAGAAAGCAATCCTTGTTTGGTGGAAACACTCAAACAGAAAAGCTGGTAGGAAGTCACCATCCAGCACA-GACCC--AGGCTCCTAACAGCCGCACAAAGAGAGAAGTTTGAGTA--------------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15748959 175 - 61074082 AACAAAGCAGACCAAATGGACAGGCTCAAAGAGACCA-CAGGGTCTAGGAGGGGACACCACATGCAAAGGCAAATACA-AGTCAGCAGCAAGCACAGTACACGGCTGCTCCAAACAGCCAGTGAGAGGA-------TAAGTGAACACACATCCCTCCATGTGAGGCGCAGGAGGTTTTCTCACT--- i canFam3.chr9 C 0 C 0 e papAnu2.chr16 190399 550 + 74645514 I a score=48481.000000 s hg38.chr17_GL383563v3_alt 306680 47 + 375691 GCTGCATCACGATGCTTAGAATGAAATGCACGGCCCGGCCAAGAGTG s panTro4.chr17 282466 47 + 82630442 GCTGCATCACGATGCTTAGAATGAAATGCACGGCCCGGCCAAGAGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162301 47 + 73212453 GCTGCATCACGATGCTTAGAATGAAATGCACGGTGCGGGCAAGAGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277733 47 - 81552678 ACTGAATCACAATGCTTAGAATGAAACGCACGGCCCAGCCAAGAGTG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 204696 7 + 80997621 ----------------------------------------CAGAGCA i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998007 47 - 1291538 ACCGAACCACCATGCTGAAAATGAAACGCATCACCCAGCCAAGAGTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918510 47 + 122082543 ACTGAATTGTGATGCTTTAAATGAAACACGTGACCCGGCCAAGGGTG i mm10.chr11 C 0 C 0 s canFam3.chr9 15749134 42 - 61074082 GCCGAAGCACAATG-----AATGAAATGTGGGGTccagccaagagcc i canFam3.chr9 C 0 C 0 e chlSab2.chr16 180559 138 + 75148670 I e papAnu2.chr16 190399 550 + 74645514 I e rheMac3.chr16 195691 208 + 80904711 I a score=53512.000000 s hg38.chr17_GL383563v3_alt 306727 35 + 375691 GCAGAACCGCCCGGCCGGCCCGTAGACTGAGGAGG s panTro4.chr17 282513 35 + 82630442 GCAGAACCGCCCGGCCGGCCCGTAGACTGAGGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162348 35 + 73212453 TCAGAACTGCCCGGCCGGCCTGTAGACTGAGGAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277780 35 - 81552678 GCAGAACTGCCTGGCCGGCCCATAGACTGAGGAGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 195899 35 + 80904711 GCAGAACTGCCCGGCCAGCCCATAGACTGAGGAGG i rheMac3.chr16 I 208 I 94 s macFas5.chr16 204703 35 + 80997621 GCAGAACTGCCCGGCCAGCCCATAGACTGAGGAGG i macFas5.chr16 C 0 I 65 s calJac3.chrUn_GL286409 998054 34 - 1291538 GCAGAACATCCCAGCTGGCC-GTGAACTTGGGAGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918557 31 + 122082543 GTAGATCTAACCAGATGACAGGT---CCAGGGAA- i mm10.chr11 C 0 C 0 s canFam3.chr9 15749176 28 - 61074082 acaga------cagctgacccaccgacttaggaa- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 180559 138 + 75148670 I e papAnu2.chr16 190399 550 + 74645514 I a score=472034.000000 s hg38.chr17_GL383563v3_alt 306762 151 + 375691 GGTAATAAATGGTGGTCGTGAGCCCCCAAGTTTGGACAGGTATGCTTGTCATGCAGTGTTACCCCAGCAATA---TATAACGGAT-AAAAATGGCATCTGGCTGATAAAATC-CCAACCCTGACCTCAATG----------------TCCA---------------GAGCTATTC--AGTTTGATTTTC s panTro4.chr17 282548 151 + 82630442 GGTAATAAATGGTGGTCGTGAGCCCCCAAGTTTGGACAGGTATGCTTGTCATGCAGTGTTACCCCAGCAATA---TATAACGGAT-AAAAATGGCATCTGGCTGATAAAATC-CCAACCCTGACCTCAATG----------------TCCA---------------GAACTATTC--AGTTTGATTTTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162383 153 + 73212453 GGTAATAAATGGTGGTCGTAAACCCCCAAGTTTGGACAGGTGTGCTTGTCATGCGGTGTTACCGCAGCAATA---CATAACAGAT-AAAAATGGCATCTGGCAGATAAAACC-CCAACCCTGACCTCAATG----------------TCCA---------------GAACTATTCAGAGTTTGATTTTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277815 153 - 81552678 GGTAATAAATGGTGGTCGTAAACCCCCAAGTTTGGACAGGTATGCTTGTCATGCAGTGTTGCCACAGCAATG---TATAAAGGAT-AAAAATGGCATCTGGCAGATAAAATC-CCAACCCTGACCTCAATG----------------TCCA---------------GAACTATTCAGAGTTTGATTTTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 196028 153 + 80904711 GGTAATAAATGGAGGTCGCGAACTCCCAAGTTTGAGCAGGTATGCTTGTCACACAGTGTTACCACAGCAACA---CATAACGGAT-AAAAATGGCATCTGGCAGATAAAATC-CCAACCCTGACCTCAGTG----------------TCCA---------------GAACTATTCAGAGTTTGATTTTC i rheMac3.chr16 I 94 C 0 s macFas5.chr16 204803 153 + 80997621 GGTAATAAATGGAGGTCGCAAACCCCCAAGTTTGAGCAGGTATGCTTGTCACACAGTGTTACCACAGCAACA---CATAACGGAT-AAAAATGGCATCTGGCAGATAAAATC-CCAACCCTGACCTCAGTG----------------TCCA---------------GAACTATTCAGAGTTTGATTTTC i macFas5.chr16 I 65 C 0 s papAnu2.chr16 190949 153 + 74645514 GGTAATAAATGTAGGTCACAAAC-CCCAGGTTTGGACAGGTATGCTTGTCACGCAGTGTTACCACAGCAACA---CATAATAGATAAAAAATGGCATCTGGCAGATAAAATC-CCAACCCTGACCTCAGTG----------------TCCA---------------GAACTATTCAGAGTTTGATTTTC i papAnu2.chr16 I 550 C 0 s chlSab2.chr16 180697 153 + 75148670 GGTAATAAATGGAGGTTGCAAACCCCCAAGTTTGGGCAGGTGTGCTTGTCACGCGGTGTTACCACAGCAACA---TATAACGGAT-AAAAATGGCACCTGGCAGATAAAATC-CCAACCCTGACCTCAGTG----------------TCCA---------------GAACTATTCAGAGTTTGATTTTC i chlSab2.chr16 I 138 C 0 s calJac3.chrUn_GL286409 998088 168 - 1291538 GGTAATAAACGGTGGTCGTAAGCCCCCATGTTTGGGTAGGTGTGCCTGTCATGCA-TGTTATCATAGCAATA---TCTAACCCAC-ACAAATGGCAACTGGCAGATAAAATC-CGAAGCCTGACCTCAATGTCCAGACAAACCCCTTTCCA---------------GAATTATTCAGAGTTTGATTTTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918588 119 + 122082543 GGCTGT-GCTGGCTGTATTGAGCC------------TAGGAATGGTCATTTTGCAG-ATTAACGTGGCAACGCGTCATAACTCAC-GCAAGTAGCATTTGGCAAATAAAACCATTCACCTTGATCT---TG----------------ACCA------------------------------------TC i mm10.chr11 C 0 C 0 s canFam3.chr9 15749204 162 - 61074082 --caataaataagtgccgtacactgtcaagtttg----ggggtggttgtcatgcagcattatcacggaaaca---tataactgat-acaAATTATATCTGGTAAATAAAATC-CCGACCTGGACCTCAATA----------------TCCAGCCAAACCCCTCCTAGAGCTGTCTGGAGTTTGACTTTC i canFam3.chr9 C 0 I 212 a score=10931.000000 s hg38.chr17_GL383563v3_alt 306913 5 + 375691 CACTT s panTro4.chr17 282699 5 + 82630442 CACTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162536 5 + 73212453 CACTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 277968 4 - 81552678 CAC-T i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 196181 5 + 80904711 CACTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 204956 5 + 80997621 CACTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 191102 5 + 74645514 CACTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 180850 5 + 75148670 CACTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998256 5 - 1291538 CACTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918707 4 + 122082543 CACC- i mm10.chr11 C 0 C 0 e canFam3.chr9 15749366 212 - 61074082 I a score=294952.000000 s hg38.chr17_GL383563v3_alt 306918 104 + 375691 GTGGTGGAAAGGCCAAAAGACCAGACGAGGGAGGCAAACAGGAGACACAAGAG--------------------GCAAGCAAAACCCAC--------T---CCCCTCCCCTCCCAGGTGCCAGAGGAAGTACCCCG- s panTro4.chr17 282704 104 + 82630442 GTGGTGGAAAGGCCAAAAGACCAGACGAGGGAGGCAAACAGGAGACACAAGAG--------------------GCAAGCAAAACCCAC--------T---CCCCTCCCCTCCCAGGTGCCAGAGGAAGTACCCCG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162541 104 + 73212453 GTGGTGGAAAGGCCAAAAGACCAGACGAGGGAGGCAAACAGGAGACACAACAG--------------------GCAAGCAAAACCCAC--------T---CCCCTCCCCTCCCGGGTGCCAGAGGAAGTACCCCG- i ponAbe2.chr17 C 0 I 8 s nomLeu3.chr19 277972 124 - 81552678 GTGGTAGAAAGGCCAAAAGACCAGACGAGGGAGGCAAacaggagacacgagaggcaaacaggagacacaagaAGCAAGCAAAACCCAC--------T---CCCCTCCCCTCCCAGGTGCCAAAGGAAGTACCAGG- i nomLeu3.chr19 C 0 I 7 s rheMac3.chr16 196186 101 + 80904711 GTGGTACAAAGGCCAAAAGACCAGACAAGGGAGGCAAACAGGAGACGCGAGAG--------------------GCAAACAAAACGCAC--------T---CCCCACCCTCCC--GGTGCCACAGGAAGGACCCG-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 204961 101 + 80997621 GTGGTACAAAGGCCAAAAGACCAGACGAGGGAGGCAAACAGGAGACGCGAGAG--------------------GCAAACAAAACGCAC--------T---CCCCACCCTCCC--GGTGCCACAGGAAGGACCCG-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 191107 101 + 74645514 GTGGTACAAAGGCCAAAAGACCAGACGAGGGAGGCAAACAGGAGACGCGAGAG--------------------GCAAACAAAAcccac--------t---ccccaccctccc--cGTGCCAGAGGAAGTACCCG-- i papAnu2.chr16 C 0 I 359 s chlSab2.chr16 180855 100 + 75148670 GTGGTAGAAAGGCCAGAAGACCAGACGAGGGAGGCAAACAGGGGACGCGAGAG--------------------GCAAA-AAAACCCAC--------T---CCCCACCCTCCC--AGTGCCACAGGAAGTACCCG-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998261 111 - 1291538 GTGGTGGCAAGGCCAAAAGACCAGACAAGGGAGGCAAACAGGAGACAGGAGAG--------------------GCAAGCAAAACCCACCCCTCCCTT---CCCCTCCACTCCCAGGTGCCAGAGGAAGTACCTG-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918711 75 + 122082543 ---------AAACCAAAAGTCTGGGTGCAGGAAGTAAATGTGAGAC---AAAG--------------------GC---CCATACCCAT--------T---AC-------------ATGACAAAGGACTGACCTT-- i mm10.chr11 C 0 I 8 s canFam3.chr9 15749578 106 - 61074082 GTGGTGAGAAGGCCGACAGACCAGGTGAGGGAGGCAAACAGGAGACACGAGGG--------------------GCCAACAGAATCCAT--------TTACTCCCGCCCTCACTCTGT-CCAGAGTGAGGACAGA-G i canFam3.chr9 I 212 I 2 a score=56637.000000 s hg38.chr17_GL383563v3_alt 307022 16 + 375691 TGGAG--AGGGCCTGGAG s panTro4.chr17 282808 16 + 82630442 CGGAG--AGGGCCTGGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162653 16 + 73212453 TGGAG--AGGGCCTGGAG i ponAbe2.chr17 I 8 C 0 s nomLeu3.chr19 278103 16 - 81552678 TGGAG--AGGGCCTGGAA i nomLeu3.chr19 I 7 C 0 s rheMac3.chr16 196287 16 + 80904711 CGGAG--AGGGCCTGGAG i rheMac3.chr16 C 0 I 670 s macFas5.chr16 205062 16 + 80997621 CGGAG--AGGGCCTGGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 191567 16 + 74645514 CGGAG--AGGGCCTGGAG i papAnu2.chr16 I 359 C 0 s chlSab2.chr16 180955 15 + 75148670 CGGAG--A-GGCCTGGAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998372 16 - 1291538 CAGAG--AGGGCTGGGAG i calJac3.chrUn_GL286409 C 0 I 17 s mm10.chr11 75918794 16 + 122082543 GGTAG--GAGGGCTAGAG i mm10.chr11 I 8 C 0 s canFam3.chr9 15749686 18 - 61074082 TGGAGGAAGGGCCTGGAG i canFam3.chr9 I 2 C 0 a score=16663.000000 s hg38.chr17_GL383563v3_alt 307038 10 + 375691 GCTTCGCAGG s panTro4.chr17 282824 10 + 82630442 CATTCGCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162669 10 + 73212453 GGTTCGCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 278119 10 - 81552678 CCTTCACAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 205078 10 + 80997621 CCTCCCCAGG i macFas5.chr16 C 0 I 560 s papAnu2.chr16 191583 10 + 74645514 CCTTCCCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 180970 10 + 75148670 CCTTCGCAGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998405 10 - 1291538 GTGTTGCAGG i calJac3.chrUn_GL286409 I 17 C 0 s mm10.chr11 75918810 10 + 122082543 ACCAAACTGG i mm10.chr11 C 0 C 0 s canFam3.chr9 15749704 10 - 61074082 CCTTCTCAGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 196303 670 + 80904711 I a score=7506.000000 s hg38.chr17_GL383563v3_alt 307048 2 + 375691 TG s panTro4.chr17 282834 2 + 82630442 TG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 162679 2 + 73212453 TG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 278129 2 - 81552678 TG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 205648 2 + 80997621 TG i macFas5.chr16 I 560 C 0 s papAnu2.chr16 191593 2 + 74645514 TG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 180980 2 + 75148670 TG i chlSab2.chr16 C 0 I 10380 s calJac3.chrUn_GL286409 998415 2 - 1291538 TG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918820 1 + 122082543 -G i mm10.chr11 C 0 I 1 s canFam3.chr9 15749714 2 - 61074082 TG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 196303 670 + 80904711 I a score=72647.000000 s hg38.chr17_GL383563v3_alt 307050 28 + 375691 GCGCCTGcagggctggaagagaggcttc s panTro4.chr17 282836 27 + 82630442 GCCCCTGCAGGGCT-GAAGAGAGGCTTC i panTro4.chr17 C 0 M 1227 s ponAbe2.chr17 162681 28 + 73212453 GCCGCTGcagggctggaagagaggcttc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 278131 28 - 81552678 GCCCCTGCAGGGCTGGAAGAGAGGCTTC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 205650 28 + 80997621 GCCTCTGCAGGGCTGGAAGAGAGGCTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 191595 28 + 74645514 GCCTCTGCAGGGCTGGAAGAGAGGCTTC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998417 28 - 1291538 GCTTCTGcagggctggaagagaggcttc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918822 28 + 122082543 GCTTTTGAAAGACTGGGAAAGAGACTTC i mm10.chr11 I 1 C 0 s canFam3.chr9 15749716 28 - 61074082 GCCAGTGCCAggctggaaaagaggcttc i canFam3.chr9 C 0 C 0 e chlSab2.chr16 180982 10380 + 75148670 I e rheMac3.chr16 196303 670 + 80904711 I a score=172702.000000 s hg38.chr17_GL383563v3_alt 307078 126 + 375691 atcccaagtgctaaatctgagctggcgcccagagggctgggt--tgaaaaggggctggaggctgcctccagcctccgtaggaa-agcatgctgtgatctgttagtcacgtctgcccccggcgtggaggg s ponAbe2.chr17 162709 126 + 73212453 atccccagtgctaaatctgagctggcgcccagagggctgggt--tgaaaaggggttggaggctgcctccagcctccgtaggaa-agggtgctgtgatctgttagtcacgtctgccCCCAGCGTGGAGGG i ponAbe2.chr17 C 0 I 57 s nomLeu3.chr19 278159 125 - 81552678 ATCCC-AGTGCTAAATCTGAGCTGGCGCCCAGAAGGCTGGGT--TGAAAAGGGGTTGGAGGCTGCCTGCAGCCTCCGTAGGAA-AGGCTGCTGTGATCTGTTAGTCACGTCTGCCCCCCGCGTGAAGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 205678 121 + 80997621 GTCCCAAATGCTAAAT-----CTGGCACCCAGAGGGCTGGGT--TGAAGAGGGGTTGGAGGCGGCCTCCGGCCTCCGTGGGAA-AAGATGCTGTGATCTGTGAGTCACGTCTGCCCCCTGCGTGGAGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 191623 121 + 74645514 GTCCCAAATGCCAAAT-----CTGGCGCCCAGAGGGCCGGGT--TGAAGAGGGGTTGGAGGCGGCCTCCGGCCTCCGTGGGAA-AGGACGCTGTGATCTGTGAGTCACGTCTGCCCCTTGCATGGAGGG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998445 125 - 1291538 atcccaagtgccaaatctgagctggcgtccagagggctgggt--ggaaaaggggttggggcccacc-ccagcctccatagaaa-gggacgctgtgatccatctgtcggatctgtcccaggcgtggaagg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918850 119 + 122082543 ATCCTGAGTCCAAAAT------CAGAgcccagagagctgtgtggtgaagagttgttgtagaccccatccagccccc-taggaa--gaatgctgtgatccattagtcatgtctg-ccctggtgtgggagg i mm10.chr11 C 0 I 1 s canFam3.chr9 15749744 126 - 61074082 atcct-ggtgccaagtctgagccaacatccagagagctgccc--tgggaaggattcagagcctgtatccagcttctgggggaacatactgctgtgtgccttcaaccatgcctgcctggggcagcctggg i canFam3.chr9 C 0 C 0 e chlSab2.chr16 180982 10380 + 75148670 I e rheMac3.chr16 196303 670 + 80904711 I e panTro4.chr17 282863 1227 + 82630442 M a score=25119.000000 s hg38.chr17_GL383563v3_alt 307204 61 + 375691 agaacggctgcacatttgctgctgcagagtgtgccatcccA----CTG----GGCGCTGTGCCTAGGCC s nomLeu3.chr19 278284 61 - 81552678 AGAACGGCTGCACATTTGCTGCTGCTGAGTGTGCCGTCCCG----CAG----GGCACTGTGCCTAGGCC i nomLeu3.chr19 C 0 I 61 s macFas5.chr16 205799 39 + 80997621 -----------------------GGTGAGTCTGCCATCCCG---CCAG----GGCGCTGTGCCTCGGCC i macFas5.chr16 C 0 I 61 s papAnu2.chr16 191744 39 + 74645514 -----------------------GGTGAGTCTGCCATCCCG---CCAG----GGCGCTGTGCCTCGGCC i papAnu2.chr16 C 0 I 61 s calJac3.chrUn_GL286409 998570 49 - 1291538 agagcggctgcacatt---------------tgccatccc-----CAGATGTGGCACTGTGCCTAGGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75918970 64 + 122082543 agagtggtagcacatttgcTGTTATCAAGTCTGTCACCCCCAAGATAG----ATTGCTGTACATGGGC- i mm10.chr11 I 1 C 0 s canFam3.chr9 15749870 64 - 61074082 agaggggctatacatccgctactgtccagtttgccatcccAAGACAAG----CTAGCTGTGATTGGCC- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 180982 10380 + 75148670 I e rheMac3.chr16 196303 670 + 80904711 I e ponAbe2.chr17 162835 57 + 73212453 I e panTro4.chr17 282863 1227 + 82630442 M a score=135578.000000 s hg38.chr17_GL383563v3_alt 307265 89 + 375691 --------------------------------------------------------------------ATACTTGCCACCGAGCCGGTGCT----------------------------------------TCCCGAGGCCTCGAAGACACCGTGTGGGAGCCCTTCGTCCAACAC-AAGGTATTAATATCCGAGGGG s ponAbe2.chr17 162892 87 + 73212453 --------------------------------------------------------------------ATACTTGCCACCAAGCCGGTGCT----------------------------------------TCCTGAGGCCTCGAAGACACCGTGTGGGAGCCCTTCGTTCAACAC-AAGGTA-TAATATCT-AGGGG i ponAbe2.chr17 I 57 I 241 s nomLeu3.chr19 278406 88 - 81552678 --------------------------------------------------------------------ATACTTGCCACCAAGCCGGTGCC----------------------------------------TCCCAAGGCCTCGAAGACACCGTGTGGGAACCCTTCGTTCAACAC--AGGTATTAATATCCAAGGGA i nomLeu3.chr19 I 61 C 0 s rheMac3.chr16 196973 89 + 80904711 --------------------------------------------------------------------ATACTTGCCACCAAGCCGGTGTG----------------------------------------TCCCGAGGCCTCGAAGACACCGTGTGGGAG-CCTCCGTTCAACACCAAGGTATTAACATCCCAGGGA i rheMac3.chr16 I 670 C 0 s macFas5.chr16 205899 89 + 80997621 --------------------------------------------------------------------ATACTTGCCACCAAGCCGGTGTG----------------------------------------TCCCGAGGCCTCGAAGACACCGTGTGGGAG-CCTCCGTTCAACACCAAGGTATTAACATCCCAGGGA i macFas5.chr16 I 61 C 0 s papAnu2.chr16 191844 89 + 74645514 --------------------------------------------------------------------ATACTTGCCACCAAGCCGGTGTG----------------------------------------TCCCGAGGCCTTGAAGACACCGTGTGGGAG-CCTCCGTTCAACACCAAGGTATTAACATCCCAGGGA i papAnu2.chr16 I 61 C 0 s chlSab2.chr16 191362 89 + 75148670 --------------------------------------------------------------------ATACTTGCCACCAAGCCGGTGTG----------------------------------------TCCCGAGGCCTCGAAGACACCGTGTGGGAG-CCTCCGTTCAACACCCAGGTATTAACATCCCAGGGA i chlSab2.chr16 I 10380 C 0 s calJac3.chrUn_GL286409 998619 122 - 1291538 ----------------------------------------------------------------------------AGGGAGGCCGGGGTGGGGGGAGATGGGGTTTAAAGGAGGGAAAAGCAGCCGGAACTCCCCAGGCCTCGAGGACACCGTGCAGGGGCCCACCGCTCAACACCAGGGAATTAACATCCCAGGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75919034 4 + 122082543 -------------------------------------------------------------------------------------------------------------------------------------------------AGAA------------------------------------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15749934 157 - 61074082 AGGGTAGAGGGTGGGGAGCAGACAAGGTAGGGAAATGGAGGAAGAAAAAGCAGAGATGAATATAAAAAATACTTGCCCCCAAGCTGGTGCT----------------------------------------TCCCAAGGCCTCCGAGATGCC-TGTAAGAGCCCTCAGCTCTACGCCCAGGTATTAATATTCCAGGGA i canFam3.chr9 C 0 C 0 e panTro4.chr17 282863 1227 + 82630442 M a score=364957.000000 s hg38.chr17_GL383563v3_alt 307354 120 + 375691 ACCCTTAGCAAC-AGCTCTGACATCTGCTCTGTTACTATGACACGGGAAACACGAGGAGGGCAGCAAGATAAGGTGAGCCCAGACGTCAACATTTCCTCCACCTGTCAGG-CGGCGCTGGGA s ponAbe2.chr17 163220 120 + 73212453 ACTCTTAGCAAC-AGCCCTGACATCTGCTCTGTTACTATGATACGGGAAACACGAGGAGAGCAGCAAGATAAGGTGAGCCCAGACGTCAACATTTCCTCCACCTGTCAGG-CCGCGCTGGGA i ponAbe2.chr17 I 241 C 0 s nomLeu3.chr19 278494 121 - 81552678 ACCCTTAGCAAC-AGCCCTGACATCTGCTCTGTTACTATGATACAGGAAACACGAGGAGAGCAGCAAGATAAGGTGAGCCCAGACGTCAGCATTTCCTCCACCTGTCGGGCCCGCGCTGGGA i nomLeu3.chr19 C 0 M 681 s rheMac3.chr16 197062 120 + 80904711 ACCCTTAGCAAC-AGCCCTGACATCTGCTCTGTTACTACGATACGGGAAACACGAGGAGAGCAGCAAGATAAGGTGAACCCAGACGTCACCATTTCCTCCACCTGCCAGG-CCGCGTTGGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 205988 120 + 80997621 ACCCTTAGCAAC-AGCCCTGACATCTGCTCTGTTACTACGATACGGGAAACACGAGGAGAGCAGCAAGATAAGGTGAACCCAGACGTCACCATTTCCTCCACCTGCCAGG-CCGCGTTGGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 191933 119 + 74645514 ACCCTTAGCAAC-AGCCCTGACATCTGCTCTGTTACTACGATACGGG-AACACGAGGAGAGCAGCAAGATAAGGTGAACCCAGACGTCACCATTTCCCCCACCTGTCAGG-CCGCATTGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 191451 119 + 75148670 ACCCTTAGCAAC-AGCCCTGACATCTGCTCTGTTACTACGATACGGG-AACACGAGGAGAGCAGCAAGATAAGGTGAACCCAGACGTCACCATTTCCTCCAACTGCCAGG-CCGCGATGGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 998741 115 - 1291538 ACCCTTAGCAAC-GGCACTGACATCTGCTCTGTTACTATGATACCGGAAACACGAGGAGAACAACAAGATAAGGTGAG-CCAGACATCAACG--TCCTCCACCTGTCAGG-CTGC--CGGGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75919038 117 + 122082543 ATCCTTAGCAACTGGCCCTGACATCTGCTCTGTTACTATGATACCGG-GAAATGGGAATAGGTTTGAGATAAGGTGAGTCCAAACACCAGCAT---CCCCACCTGTCACG-CTACACTGCGT i mm10.chr11 C 0 C 0 s canFam3.chr9 15750091 118 - 61074082 ACCCTTAGCAACAGGCCCTGACATCTGTTCTGTTACCATGATACGGG---CACCATGCTAATAGCAAGATAAGGTGAGCTGAGACATCCACCTTTCCTCCACCTGTCACA-CCACACCAGGA i canFam3.chr9 C 0 C 0 e panTro4.chr17 282863 1227 + 82630442 M a score=274485.000000 s hg38.chr17_GL383563v3_alt 307474 151 + 375691 GGATTAAAGACTCAGAGAGGGAGCCTCAAAGGCCTGTCTAAACGCCCAAAGAACCACTCACTCGGAAGCGTTGCAGGCTGACTATGCACCAAGC-GGGCTCGAGTGGATTCCAGAGTTGAAGCAGGAGCCCCGGGGAAACCAGTGCC-TGACA s ponAbe2.chr17 163340 131 + 73212453 GGATTAAAGACTCAGAGAGGGAGCCTCAAAGGCCTGTCTAAACGCCAAAGGAACCACTCACTCGGAAGCATTGCAGGCT---------------------CGAGTGGATTCCGGAGTTGAAGCAGGAGCCCCGGGGAAACCAGTGCC-TGACA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 197182 151 + 80904711 GGATAAAAGACTCAGAGAGGGAGCCTCAAAGGCCTGTCTAAACCCCAAAGGTACCACTTACTCAGAGACATCACGGGCTGATTATGCACCGAGC-AGGTTCGAGAGGATTCTGGAGTTGAAACAGGAGCCCTGGGGAAACCAGTGTC-TGACA i rheMac3.chr16 C 0 I 2 s macFas5.chr16 206108 151 + 80997621 GGATAAAAGACTCAGAGAGGGAGCCTCAAAGGCCTGTCTAAACCCCAAAGGTACCACTTACTCGCAGACATCACGGGCTGATTATGCACCGAGC-AGGTTCGAGAGGATTCTGGAGTTGAAACAGGAGCCCTGGGGAAACCAGTGTC-TGACA i macFas5.chr16 C 0 M 3370 s papAnu2.chr16 192052 151 + 74645514 GGATAAAAGACTCAGAGAGGGAGCCTCAAAGGCCTGTCTAAACCCCAAAGCTACCACTTACTCGGAGACATCGCAGGCTGATTATGCACCGAGC-AGGTTCGAGTGGATTCTGGAGTTGAAACAGGAGCCCTGGGGAAACCAGTGTC-TGACA i papAnu2.chr16 C 0 I 2 s chlSab2.chr16 191570 151 + 75148670 GGATAAACGACTCCAAGAGGGAGCCTCAAAGGCCTGTCTAAACCCCAAAGGTACCACTTACTCGGAGACATCACAGGCTGATTATGCACCGAGC-AGGTTCGAGAGGATTCTGGAGTTGAAACAGGAGCCCTGGAGAAACCAGTGTC-TGACA i chlSab2.chr16 C 0 I 2 s calJac3.chrUn_GL286409 998856 149 - 1291538 GGATACAAGACTCAGAGAGGGAGCCTCAAAGGCCTGTCTGAAC-CCAAGGGAGCCACTTGCT-GGAAGCTTCGCAGGCTGATCACGCACCAAGA-GGGCGAGAGTGGATTCCAGAGTTGAAGCCAGAGCCC-AGGGAAGCCAGTGTCTTGACA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75919155 130 + 122082543 GGAAGGAAGATTCATGCAGGCAGCCTCCAAGGCTCATCCTGAATCCCAAAGCACTGCTCACTC--AAGCACCCTGGAATAAC------------------AGGAAAGATTCAAGA--TGAGGCAAAAGCCACAGGGAGGCCGATGTC-TGACC i mm10.chr11 C 0 I 5 s canFam3.chr9 15750209 146 - 61074082 GGATGAAAGATCCAGACCGGAAGCCTCAAAGGCCTGTCTGAAACCAGAAGGAATCTCTCTAT----GGTGTCTTGGGCTAATTATGCATGAGGCAAGGCTTGA--GGGCTTGGGAGACGAGACAGGAATCCCGAGGAAGCTAGTGCC-TGACA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 278615 681 - 81552678 M e panTro4.chr17 282863 1227 + 82630442 M a score=54740.000000 s hg38.chr17_GL383563v3_alt 307625 55 + 375691 AACCTCCCTCAAAC--TC-CACCGTCCCCGGGCACCCTGCCAGGTCTGCCTGCTCGGG s ponAbe2.chr17 163471 54 + 73212453 AACCTCCCTCAGAC--TC-CACCGTCCCCGGGCACCCTGCCAGGTCTGCCTGCT-GGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 197335 55 + 80904711 AACGTCCTTCAAAC--TC-CCCCATCCCCGGGCTCCCTGCCAGGCCTGCCTGCTGGCG i rheMac3.chr16 I 2 C 0 s papAnu2.chr16 192205 54 + 74645514 AACTTCCTTC-AAC--TC-CCCCATCCCCGGgctccctgccaggcctgcctgctcaca i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 191723 54 + 75148670 AACATCCTTC-AAC--TC-CCCCATCCCTGGGCTCCCTGCCAGGCCTGCCTGCTCGCG i chlSab2.chr16 I 2 C 0 s calJac3.chrUn_GL286409 999005 52 - 1291538 CACATCTCCCAAAC--GC-CA-TGTCCCTGA--CACCTACCAGGTGTGCCTGCTTGGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75919290 56 + 122082543 AATGTCCCTA-AACGGTG-CCCTGTCATTATGCTTCCGGCCAGATCTGCCTGCTCACT i mm10.chr11 I 5 C 0 s canFam3.chr9 15750355 55 - 61074082 AACGTCCCTAGAAC--CCACTCTGTCAGCAGGCGTCCTGACAGATCTGTTTCCTTGG- i canFam3.chr9 C 0 C 0 e macFas5.chr16 206259 3370 + 80997621 M e nomLeu3.chr19 278615 681 - 81552678 M e panTro4.chr17 282863 1227 + 82630442 M a score=2194.000000 s hg38.chr17_GL383563v3_alt 307680 2 + 375691 GC s ponAbe2.chr17 163525 2 + 73212453 GC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 197390 2 + 80904711 GC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 209693 2 + 80997621 GT i macFas5.chr16 M 3370 C 0 s papAnu2.chr16 192259 2 + 74645514 gc i papAnu2.chr16 C 0 I 150 s chlSab2.chr16 191777 2 + 75148670 GC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999057 2 - 1291538 AT i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75919346 1 + 122082543 -C i mm10.chr11 C 0 I 1 s canFam3.chr9 15750410 2 - 61074082 AT i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 278615 681 - 81552678 M e panTro4.chr17 282863 1227 + 82630442 M a score=1883.000000 s hg38.chr17_GL383563v3_alt 307682 1 + 375691 G s ponAbe2.chr17 163527 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 197392 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 209695 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192411 1 + 74645514 g i papAnu2.chr16 I 150 C 0 s chlSab2.chr16 191779 1 + 75148670 A i chlSab2.chr16 C 0 I 158 s mm10.chr11 75919348 1 + 122082543 G i mm10.chr11 I 1 I 6 s canFam3.chr9 15750412 1 - 61074082 G i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 999059 1 - 1291538 I e nomLeu3.chr19 278615 681 - 81552678 M e panTro4.chr17 282863 1227 + 82630442 M a score=35515.000000 s hg38.chr17_GL383563v3_alt 307683 15 + 375691 GCTCCCcctcctccc s ponAbe2.chr17 163528 15 + 73212453 GCTCCCcctcctccc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 197393 15 + 80904711 GCTCCCCCTCCTCCC i rheMac3.chr16 C 0 I 364 s macFas5.chr16 209696 15 + 80997621 GCTCCCCCTCCTCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192412 15 + 74645514 gctccccctcctccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 191938 15 + 75148670 GCTCCCCCTCCTCCC i chlSab2.chr16 I 158 C 0 s calJac3.chrUn_GL286409 999060 12 - 1291538 ---GCCCCTCCTCCC i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75919355 15 + 122082543 TCTCTTCTTCCTCCT i mm10.chr11 I 6 C 0 s canFam3.chr9 15750413 15 - 61074082 ACTCTTCACCCCTCC i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 278615 681 - 81552678 M e panTro4.chr17 282863 1227 + 82630442 M a score=161071.000000 s hg38.chr17_GL383563v3_alt 307698 139 + 375691 agc--tcc-gatgctcctcc-----tctcttgcccagaccgtggcaaatcttcctcatctgccttggaacctgctggggctccccgttgcccctcttcacgtacagccagagagaccatcctta-cagcccaggtcaggccgtgtgat s ponAbe2.chr17 163543 137 + 73212453 agc--tcc-gatgctcctcc-----tctgttgcccggacagtggcaaatcttcctcatctgccttggaacctgctggggctccccgttgcaggt--tcatgtgcagccagagaggtcatcctta-cagcctaggtcaggccgtgtgat i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 197772 118 + 80904711 AGC--TCC-GACGCTCCTCC-----TCTCTTGCCCAGACAGGGGCAAGTCTTCCTCATCTGCCTTGGAACCTGCTGGGGCTCCC-GGTGCCCCTCTTCACGTGCAGCcag---------------------aggtccggctgtgtgac i rheMac3.chr16 I 364 C 0 s macFas5.chr16 209711 118 + 80997621 AGC--TCC-GACGCTCCTCC-----TCTCTTGCCCAGACAGGGGCAAGTCTTCCTCATCTGCCTTGGAACCTGCTGGGGCTCCC-GGTGCCCCTCTTCACGTGCAGCcag---------------------aggtccggctgtgtgac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192427 119 + 74645514 agc--tcc-gacgctcctcc-----tctcTTGCCCAGACAGGGGCAAGTCTTCCTCATCTGCCTTGGAACCTGCTGGGGCTCCCGGGTGCCCCTCTTCACGTGCAGCCAG---------------------AGGTCCGGCTGTGTGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 191953 118 + 75148670 AGC--TCC-GACGCTCCTCC-----TCTCTTGCCCAGACAGGGGCAAGTCTTCCTCATCTGCCTTGGAACCTGCTGGGGCTCCC-GTTGCCCCTCTTCACGTGCAGCcag---------------------aggtccggctgcgtgac i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999072 92 - 1291538 AG---------------------------------------------------CTCACCTGCCTCAGAACCTGCTGGGGCTCCCTCTTGAGCCA--TCATGTgcagccag--aggtcaccctga-cagcctaggtcgggctgtgtgag i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75919370 140 + 122082543 AGC--TTCAGATGCACCACCCACCTCCTCTTGCTAAGACTGTAGCAATGCTTAGTCA---GACTTTAGGCCTCCTGAGGCTCAC-ATCCAGACCCTTCATGTTGTACCAGAAAGATCTTCCTTAGTAGCATAGGTCAGA--GTGTGAT i mm10.chr11 C 0 C 0 s canFam3.chr9 15750428 122 - 61074082 --CTGTTC-ACTTCTttatc-----tctcctgccctgattgtggcaaaa-----------gcctttggacctcctgaggcctca------cgccattcccttgcagccagagaggtcttcctta-aagctcaggtcaggacatgtgat i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 278615 681 - 81552678 M e panTro4.chr17 282863 1227 + 82630442 M a score=273260.000000 s hg38.chr17_GL383563v3_alt 307837 102 + 375691 tcccctgctcagaaaccttcggtggctccccactact--aaggaaacaagccc--tagctgccctcaaggccgtccatgatctggcacaaaccacccttgcattct s ponAbe2.chr17 163680 102 + 73212453 tcccctgctcacaaaccttcagtggctccccactact--aaggaaaaaagccc--aagctgccctcaaggtcgtccatgatctggCACAAACCACCCTTGCATTCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279299 101 - 81552678 tcccctgctcag-aaccttcagtgcctccccactact--aaggaaaaaagccc--tagctgccctcaaggccgtccacgatctggCACAAACCACCCTTCCACTCT i nomLeu3.chr19 M 681 C 0 s rheMac3.chr16 197890 101 + 80904711 tcccccactcaaacaccttcagtggctccccactacc--aaggaagaaagccc--aagctgccctcaaggccgtccatgatctggCACAAACCA-CCTTCCATTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 209829 101 + 80997621 tcccccactcaaacaccttcagtggctccccactacc--aaggaagaaagccc--aagctgccctcaaggccatccatgatctggCACAAACCA-CCTTCCATTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192546 101 + 74645514 TCCCTGACTCAAACACCTTCAGCAGCTCCCCACTACC--AAGGAAGAAAGCCC--AAGCTGCCCTCAAGGCCGTCCATGATCTGGCACAAACCA-CCTTCCATTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192071 101 + 75148670 tccctcactcaaacaccttcagtggctccccactacc--aaggaagaaagccc--aagctgccctcaaggccatccatgatctggCACAAACCA-CCTTCCATTCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999164 101 - 1291538 tctgctgctcaaaaaccttcagcagct-cccactact--aaggagaaaagccc--gagctgccctccaggccggggatgacctggcacagaccacccttccgctct i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75919510 93 + 122082543 -----------CAAAACTTCTGTGGCTCCACCCTACCATAGGGTAAAAAGCCC--AAGCTGCAAGAAAAAGTCTCCATGATCTAGGCCAGAATACGCCTGCAGTTT i mm10.chr11 C 0 I 1137 s canFam3.chr9 15750550 105 - 61074082 tcccttgttcaaaaaccttcgatggctccccactgcca-aaggaaaaaaacccagaagccacactcaaggtcatctatgatctggcccaagctacccttccagtct i canFam3.chr9 C 0 I 1 e panTro4.chr17 282863 1227 + 82630442 M a score=231150.000000 s hg38.chr17_GL383563v3_alt 307939 137 + 375691 gccagc-----cacccctctgcaaaactggtgctccagccaccagg-accttgaggcattgcagccgcccagccttgtctccggcaccctctcacctggaacgcctttggttcacgctgtctacctcctccacctggGGGTGG s ponAbe2.chr17 163782 137 + 73212453 GCCAGC-----CACCCCTCTGCAAAACTGGTGCTCCAGCCGCCAGG-ACCTTGAGGCATCGCAGCCGCCCAGCCTTGTCTCCGGCACCCTCTCACCTGGAACATCTTTGGTTCACGCTGTCTACCTCCTCCACCTGGGGGTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279400 137 - 81552678 ACCAGC-----CACCCCTCTGCAAAACTGGTGCTCCAGCCACCAGG-ACCTTGAGGCATCGCAGCCGCCCAGCCTTGTCTCTGGCACCCTCTCACTTGGAACGCCTTTGGTTCACGCCGTCTCCCTCCTCCACCTGGGGGTGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 197991 116 + 80904711 AGCAGCCACCTCACCCCTCTGCAAAACTGGCACT--------------------------CCAGCTGCCCAGCCTTGTCTCCGGCA-CCTCTCACCTGGAACGCCTTTGGTTCACGCTGTCCACCTCCCCCAGCTGCGGGTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 209930 116 + 80997621 AGCAGCCACCTCACCCCTCTGCAAAACTGGCGCT--------------------------CCAGCTGCCCAGCCTTGTCTCCGGCA-CCTCTCACCTGGAACGCCTTTGGTTCACGCTGTCCACCTCCCCCAGCTGCGGGTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192647 141 + 74645514 AGCAGCCACCTCACCCCTCTGCAAAACTGGCGCTCCAGCCGCCAGG-ACCTGGATGCGCCCCAGCTGCCCAGCCTTGTCTCCGGCA-CCTCTCACCTGGAACGCCTTTGGTTCACGCTGTCCACCTCCCCCAGCTGGGGGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192172 142 + 75148670 AGCAGCCACCTCACCCGTCTGCAAAACTGGCGCTCCAGCCGCCAGG-ACCTTGATGCGCCCCAGCTGCCCAGCCTTGTCTCCGGCACCCTCTCACCTGGAACGCCTTTGGTTCACGCTGCCCACCTCCCCCAGCTTGGGGTGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999265 106 - 1291538 g-cagccacctcatcc-tctgcACAACTGCGGCTCCGGCCACCAGG-ACCTTGGCGCATCCCAGCGGCCCAGCCTCGCCTCCTGCACCCTCTCACTCAGATGGCC----------------------------------AGAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15750656 132 - 61074082 accaattactgcatccctccacaaaactcacactccagccactgggcacctGGACACATTCTGACTGCTCAGCTCTTTCTCCAGAA-CTTCACATGTAAAGTGTCATTCCTGCACACTATCTACCT------GCAGAGG---- i canFam3.chr9 I 1 C 0 e mm10.chr11 75919603 1137 + 122082543 I e panTro4.chr17 282863 1227 + 82630442 M a score=114091.000000 s hg38.chr17_GL383563v3_alt 308076 39 + 375691 CCCAGCACCACCTCCCCTGGGAATTCTCCAGCTCCTCCC- s ponAbe2.chr17 163919 39 + 73212453 CCCAGCACCACCTCCCCTGGGAATTCTCCAGCTCCTCCC- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279537 39 - 81552678 CCCAGAACCACCTCCCCTGGGAATTCTCCAGCTCCTCCC- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198107 39 + 80904711 CCCAGCAGCACCTCCCCTGGGAACTCTCTGGCTCCCCCC- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210046 39 + 80997621 CCCAGCAGCACCTCCCCTGGGAACTCTCTGGCTCCCCCC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192788 39 + 74645514 GCCAGCACCACCTCCCCTGGGAACTCTCTGGCTCCCCCG- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192314 39 + 75148670 CCCAGCACCACCTCCCCTGCGAACCCTCTGGCTCCCCCG- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999371 39 - 1291538 CCCAGTATCACCTCCCTTGGGGATTCTCTGGCTCCTCCC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75920740 39 + 122082543 CCCAGCCCCACCTCTGGTGGGAATTCTGTAGCTTCTCTC- i mm10.chr11 I 1137 I 1400 s canFam3.chr9 15750788 40 - 61074082 CCTGGTACCACCTCCTCCGGGAATTCCCTCCCTCCTTCCC i canFam3.chr9 C 0 C 0 e panTro4.chr17 282863 1227 + 82630442 M a score=286518.000000 s hg38.chr17_GL383563v3_alt 308115 153 + 375691 ATCAGGCTCCCATTCGGCTTGAGCCCACCGC-CCTCCCGTCAGCATTTCATTCCGC-CCGCATCCTCGGGGGCATTTACCT----------------------------------------------------GTTACCCCGATGCCCAG-ACATGGTGG--GTCCAGTACCCCTTCAGGGGACTAAT-TTAACCGTC-AAGAGTTTGCCAC s ponAbe2.chr17 163958 132 + 73212453 ATC--------------------TCCACCGC-CCTCCCATCAGCATTTCATTCTGC-CTGCATCCTCGGGGGCCTTTAACT----------------------------------------------------GTTACCCCGAT-CCCAG-ACATGGTGG--GTCCAGTACTCCTTCAGGGGACTAAT-TTAACCATC-AAGAGTTTGCCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279576 155 - 81552678 ATCTGGCTCCCATTCAGATTGAGCCCACTGC-CCTCCTGTCAGCATTTCATTCTGC-CTGCATCCTAGGGGGCCTTCACCT----------------------------------------------------GTTACCCCGATGGCCAG-ACATGATGGGTGTCCAGCACTCCTTCAGGGGACTAAT-ATAACCATC-AAGAGTTTGCCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198146 152 + 80904711 ATCTGGCCCCCATTCCGATTGAGCCCACCTC-CCTCCCATCGGCACTTCATTCTGC-CCGCATCCC--AGGGTCTTCAACC----------------------------------------------------GTTACCCCGATGCCCAG-ACACGGTGGGTGTCCAGTACTCC-TCAGGGGACTAAT-TGAACCATC-AAGAGTTTGCCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210085 152 + 80997621 ATCTGGCCCCCGTTCCGATTGAGCCCACCTC-CCTCCCATCGGCACTTCATTCTGC-CCGCATCCC--GGGGTCTTCAACC----------------------------------------------------GTTACCCCGATGCCCAG-ACACGGTGGGTGTCCAGTACTCC-TCAGGGGACTAAC-TGAACCATC-AAGAGTTTGCCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192827 149 + 74645514 ATCTGGCCCCCGTTCCGATTGAGCCCACCTC-CCTCCCATTGGCACTTCATTCTGC-CCGCATCCC--GGGGTCTTCACCC----------------------------------------------------GTTACCCCGATGCCCAG-ACACGGGGGGTGTCCAGTACTCC-TCAGGGGACTA----TAACCATC-AAGAGTTTGCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192353 154 + 75148670 ATCTGGTCCCCGTTCCGATTGAGCCCACCTC-CCTCCCATCGGCATTTCATTCTGC-CCACATCCC-AGGGGTCTTCACCC----------------------------------------------------GTTACCCCGATGCCCAG-ACACGGTGGGTGTCCAGTAGTCCTTCAGGGGACTAAT-TTAACCATC-AAGAGTTTGCCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999410 156 - 1291538 ATCTGGCTGCCATTCAGATGGAACCCACCTC-CCTCCCATCAGCATTTCACTCTGC-CGGCCTCCCAGGGGTTCTTCCCCT----------------------------------------------------GTTACCCCAATGCCCAG-ATGTGGTGGGTGTCCAGTGCACCTTCA-GGAACTAATGTTAACCATTGAAGAGTCTGCCAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15750828 210 - 61074082 ATCCAGCTCCTGTTTGGATTCTACCTCCCTTGCCTTCCCACAGCATTTCATCCCCCTTTGTATCCTGGGGGGTCTTTACCTCCGTCACCTGTATGAAGACCACAGCTCCCAGGATACACCTCAGTGTCCCGGGGCTAGCACAGTGCTCAGAACTTAGCAGGTATGC-GTACACCTCTGTGGACCCAACACTAACTTTC-AAGAGTTTACCGC i canFam3.chr9 C 0 I 80 e mm10.chr11 75920779 1400 + 122082543 I e panTro4.chr17 282863 1227 + 82630442 M a score=173170.000000 s hg38.chr17_GL383563v3_alt 308268 90 + 375691 TCACTGGAACTACGTACATCGGTTACGCACCAATAAttt---tttttttttgagacagggtcttgctccgttgcccaggctggagtgcagtgg s ponAbe2.chr17 164090 86 + 73212453 TCACTGGAACTATGTACATTGGTTATGCACCAATAAttt---tttttttt-gagacagcgtcttgctccgttgcccaggctggagtgcag--- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279731 86 - 81552678 TCACTGGAACTATGTACATCAGCTGTGCACCAATAACtt---ttttt----gagacagggtcttgctctgttgcccaggctggagtgcagtgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198298 85 + 80904711 TCACCAGAACTGTGTA-ATCAGTCAGGCACCAATAAttc---tttct----gagacagggtcctgctctgtagcccaggctggagtgcagtgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210237 85 + 80997621 TCACCAGAACTGTGTA-ATCAGTCAGGCACCAATAAttc---tttct----gagacagggtcctgctctgttgcccaggctggagtgcagtgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 192976 85 + 74645514 TCACCGGAACTGTGTA-ATCGGTTAGGCACCAAtaattc---ttttt----gagacagggtcttgctctgttgcccaggctggagtgcagtgg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192507 88 + 75148670 TCACCAGAACTGCGTA-ATCGGTTAGGCACCAATAAttctttttttt----gagacagggtcctgctctgttgcccaggctggagtgcagtgg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999566 86 - 1291538 TCGCTGGAACTATGTACATCCATTATGCACCAATAATGt---ttttt----gagacagggtcttgctctgttgcccaggctggagtgcagtgg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75920779 1400 + 122082543 I e canFam3.chr9 15751038 80 - 61074082 I e panTro4.chr17 282863 1227 + 82630442 M a score=65961.000000 s hg38.chr17_GL383563v3_alt 308358 40 + 375691 cacagtcacagttcactgc---agcctccaac----tcctcggctcc s ponAbe2.chr17 164176 19 + 73212453 ------------------------cctccaac----tgctgggctcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279817 40 - 81552678 cacagtcagagctcactgc---aacctccaac----tcctgggctcc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198383 40 + 80904711 cacagccgtagctccctgc---ggcctccaac----tcctgggctca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210322 40 + 80997621 cacagccgtagctccctgc---ggcctccaac----tcctgggctca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 193061 40 + 74645514 cacagccgtAGCTCCCTgc---ggcctccaac----tcctgggctca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192595 40 + 75148670 cacagccgtagctccctgc---ggcctccaac----tcctgggctca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999652 44 - 1291538 cgctatcacagctcactgc---agcctccaactccttcctgggctca i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15751118 42 - 61074082 CACAGGCCCATC-CACTGCATGGGCCTCAAGC----ACCCTGCCTCT i canFam3.chr9 I 80 I 273 e mm10.chr11 75920779 1400 + 122082543 I e panTro4.chr17 282863 1227 + 82630442 M a score=98852.000000 s hg38.chr17_GL383563v3_alt 308398 49 + 375691 cgtgatcctcgcatcagcctcccaagtcgctagaactacacgcctg-gct------------- s ponAbe2.chr17 164195 49 + 73212453 agtgatccttgcatcagcctcccaagtcgctagaactacatgcctg-gct------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279857 49 - 81552678 agtgattcttgcatcagcctcctaagtcgctagaactaaatgcctg-gct------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198423 49 + 80904711 agtgatccttgtgtcagcctcccaagtcgctagaacgacacgcctg-gct------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210362 49 + 80997621 agtgatccttgtgtcagcctcccaagtcgctagaacgacacgcctg-gct------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 193101 49 + 74645514 agtgatccttgcgtcagcctcccaagtcgctggaacgacacgcctg-gct------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192635 49 + 75148670 agtgatcctggcgtcagcctcccaagtcgctagaacgacacacctg-gct------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999696 63 - 1291538 actgatccttgcatcagcctctcaggtcgctaggactacaggcttgtgccatcacatctggtg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75920779 1400 + 122082543 I e canFam3.chr9 15751160 273 - 61074082 I e panTro4.chr17 282863 1227 + 82630442 M a score=378056.000000 s hg38.chr17_GL383563v3_alt 308447 146 + 375691 aattttttaattttttggtaaagacagggtcttgctctgttgtccaggctggtctcaaactcctgggctcaaatgatcctcctgcctcagcctcccaggtagctgggactatgggagtacgccacgacacccagccTGCCAACAAA s panTro4.chr17 284090 146 + 82630442 AAttttttaatattttggtaaagacagggtcttgctctgttgtccaggctggtctcaaactcctgggctcaaatgatcctcctgcctcagcctcccaagtagctgggactatgggagtacgccacgacacccagcCTGCCAACAAA i panTro4.chr17 M 1227 C 0 s ponAbe2.chr17 164244 146 + 73212453 aagtatttaattttttggtaaagacagcgtcttgctccattgcccaggctggtctcaaacttctgggctcaaatgatcctcctgcctcagcctcccaagtagctgagactatgggagtacaccacgacacccagccTGCCAATAAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 279906 145 - 81552678 aattttttaattttttggtaaagacagggtctcgctctgttttccaggctggtctcgaactctt-ggctcaaatgatcctcctgcctcaaccttccaagtagctgggactatgggagtacgccgcgacacccagccTGCCAATAAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198472 132 + 80904711 aatttttaaattttttggtagagacagggtcttgctctgttgtccaggctggtctcaaac--------------gatcctcctgcctcagcctcccacgtagctgggactatgggagtacgccaccacgcccagccCGCCAATAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210411 132 + 80997621 aatttttaaattttttggtagagacagggtcttgctctgttgtccaggctggtctcaaac--------------gatcctcctgcctcagcctcccacgtagctgggactatgggagtacgccaccacgcccagccCGCCAATAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 193150 132 + 74645514 aatttttaaattttttggtagagacagggtcttgctctgttgtccaggctggtctcaaac--------------aatcctcctgcctcagcctcccacgtagctgggactatgggagtacgccaccacgcccagcctgccaATAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192684 132 + 75148670 aatttttaaactttttggtagagacagggtcttgctctgttgtccaggctggtctgaaac--------------gatcctcctgcctcagcctcccaagtagctgggactatgggagtacgccaccacgcccagccCGCCAATAAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999759 145 - 1291538 aatgttttaattttttggtagagacagggtctcactctgttgtccaggtaggtcttgaactcctgggctcaaatgatcctcctgcctcagcct-ccaagtagctaggactacaagagtgccccaccacacccagccTACCAGTAAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75920779 1400 + 122082543 I e canFam3.chr9 15751160 273 - 61074082 I a score=91905.000000 s hg38.chr17_GL383563v3_alt 308593 38 + 375691 ATTTTATCTTAAAAACCGCCTCACG------GCATAAGGCTCAG---- s panTro4.chr17 284236 38 + 82630442 ATTTTATCTTAAAAACCGCCTCACG------GCATAAGGCTCAG---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 164390 38 + 73212453 ATTTTATCTTAAAAACCACCTCACG------GCATAAGGCCCAG---- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 280051 38 - 81552678 ACTTTATCTTAAAAAGTGCCTCACG------GGGTAAGGCCCAG---- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198604 38 + 80904711 ATCTTGTCTTAAAAAGCGCCTCACG------GAATAAGGTCCAG---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210543 38 + 80997621 ATCTTGCCTTAAAAAGCGCCTCACG------GAATAAGGTCCAG---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 193282 38 + 74645514 ATCTTGTCTTAAAAAGCGCCTCACG------GAATAAGGTCCAG---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192816 44 + 75148670 ATCTTGTCTTAAAAACCGCCTCACGGAATAAGAATAAGGTCCAG---- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999904 38 - 1291538 ATTTTGTTTCAAAAAGCGCCTCACA------GAATAACGCCCTG---- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15751433 40 - 61074082 AATTTATTTCAGCAATATTTTCCAA------GGATAAG--TTAGGCAC i canFam3.chr9 I 273 C 0 e mm10.chr11 75920779 1400 + 122082543 I a score=604763.000000 s hg38.chr17_GL383563v3_alt 308631 256 + 375691 CCTCGCTG-----------------------------------GCCTCCTTAACCTGCCTCTTT-CCCTCTGCC---ACACACGGGCTCTCTACGGACCCTCCAGCCCCTGCTAAGAC---------------------TCCTGCAGCCTTTCTTGCCTGTGTGCTTTGAGGAGCAGCAA-TCCTGGA--CATGCCACCCAGGACCCCGTCCAGGAGGCACCCCAACTTGGTCACAGAGCTAAGCGTCTGCTCCTGTCCTC-------GGCAGGACCAACAGCGGCA----------------CCTCTCAGTTTCCTTGGCC------------------tcgttcattcaacacacaca s panTro4.chr17 284274 277 + 82630442 CCTCGCTG-----------------------------------GCCTCCTTAACCTGCCTCTTT-CCCTCTGCC---ACACACAGGCTCTCTATGGACCCTCCAGCCCCTGCTAAGACCCCTCCAGCCCCTGCTAAGACTCCTGCAGCCTTTCTTGCCTGTGTGCTTTGAGGAGCAGCAA-TCCTGGA--CATGCCACCCAGGACCCCGTCCAGGAGGCACCCCCACTTGGTCACAGAGCTAAGCGTCTGCTCCTGTCCTC-------GGCAGGACCAACAGCAGCA----------------CCTCTCAGTTTCCTTGGCC------------------TCGTTCATTCAACACACACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 164428 291 + 73212453 CCTCGCTGGCCTGGAATTTAAAGCCCAACAGTGTGAACCCCTCGCCTCCTTAACCTGCCGCTTT-CCCTCTGCC---ACACATGGGCTCTCTACGGACCCTCCAGCCCCTGCTAAGAC---------------------TCCTGCAGCTTTTCTTGCCTGTGTGCTTTGAGGAGCAGCAA-TCCTAGA--CATGCCACCCAGGACCCCGACCAGGAGGCACCCCAACTTGGTCACAGAGCTAAGTGTCTGCTCCTGTCCTC-------GGCAGGACCAACAGCAGCA----------------CCTTTCACTTTCCTTGGCC------------------tcgttcattcaacaaacaca i ponAbe2.chr17 C 0 I 252 s nomLeu3.chr19 280089 283 - 81552678 CCTCGCTGGCCTGGAATTTAAGGCCCAACAGTGTGAACCCCTCACCTCCTTAACCTGCCTCTGT-CCCTCTGCC---ACACACGGGCTCTGTACGGACCCTCCAGCCCCTGCTGAGAC---------------------TCCTGCAGCCTTCCTTGCCTGTGTGCTTTGAACAGCAGCAA-TCCAGGA--CA-ATCACCCAGGACCCCGTCCAGGAGGCACCCCCACTTGGTCACAGAGCTAAGCGTCTGCTCCTATCCTC-------GGCAGGACCAACAGCAGCA----------------CCC-----TTTCAGTGG--------------------TGGTTCATTCAACAAACACG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198642 286 + 80904711 CCTCGCTGGCCTGAAATTTAAGGCCCAGCAGTGTGAACCCGTCACCTCCTTCACCTGCCTCTTT-CCCCCTGCC---ACACCTGGGCTCTCTACGGACCCTCCAGCCCCTGCTGAGAC---------------------TCCCGCAGCCTTTCTTGTCTGTGCTCTTTGAGGAGCAGCGA-CCCCGGA--CATGCTGCCCAGGACCCCGTCCGGGGGCCGCCCC-ACTTGGTCACAGAGCTAAGCGTCTGCTACTGTCCTC-------AGCAGGACCAACAACAGCA----------------CCTTTCAGTTTCCTTGGCC------------------TCGTTCGTCAAACACG---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210581 286 + 80997621 CCTCGCTGGCCTGAAATTTAAGGCCCAGCAGTGTGAACCCGTCACTTCCTTCACCTGCCTCTTT-CCCCCTGCC---ACACCTGGGCTCTCTACGGACCCTCCAGCCCCTGCTGAGAC---------------------TCCCGCAGCCTTTCTTGTCTGTGCTCTTTGAGGAGCAGCGA-CCCCGGA--CATGATGCCCAGGACCCCGTCCGGGGGCCGCCCC-ACTTGGTCACAGAGCTAAGCGTCTGCTACTGTCCTC-------AGCAGGACCAACAACAGCA----------------CCTTTCAGTTTCCTTGGCC------------------TCGTTCGTCAAACACG---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 193320 290 + 74645514 CCTCGCTGGCCTGAAATTTAAGGCCCAACAGTGTGAACCCGTCACCTCCTTCACCTGCCTCTTTCCCCCCTGCCTCTACACCTGGGCTCTCTACGGACCCTCCAGCCCCTGCTGAGAC---------------------TCCCGCAGCCTTTCCTGTCTGTGCTCTTTGAGGAGCAGCGA-CCCCGGA--CATGCTACCCAGGATCCCGTCCGGGGGCCGCCCC-ACTTGGTCACAGAGCTAAGCGTCTGCTACTGTCCTC-------AGCAGGACCAACAACAGCA----------------CCTTTCAGTTTCCTTGGCC------------------TCGTTCGTCAAACACG---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 192860 290 + 75148670 CCTCGCTGGCCTGAAAGGTAAGGCCCAACAGTGTGAACCCGTCACCTCCTTCACCTGCCTCTTTCCCCGCTGCCTCTACACCCGGGCTCTCTACGGACCGTCCAGCCCCTGCTGAGAC---------------------TCCCGCAGCCTTTCCTGCCTGTGCTCTTTGAGGAGCAGCGA-CCCCGGA--CATGCTGCCCAGGACCCCGTCCGGGGGCCGCCCC-ACTTGGTCACAGAGCTAAGTGTCTGCTACTGTCCTC-------AGCAGGACCAACAACAGCA----------------CCTTTCGGTTTCCTTGGCC------------------TCGTTTGTCAAACACG---- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 999942 194 - 1291538 CCTCGCTGGTCTGGAATTCAAGGGCCAACAGTGTGAAGCCCTCACTTCCTGAAACTGCTCCTTTTTCCCCCGCC---ACACATGGACTCTCTGAGGACCC-CCAGTCCCTGCTAAGAC---------------------TCCTGCAGCCTCGCTTGTCTGTG-ACCTTGAGGAGCAGCAA-CCCTGGGCCCACGCCACCCAGGACCCC-TCCAAAGCACACG------------------------------------------------------------------------------------------------------------------------------------------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75922179 256 + 122082543 CCTACCTG-----------------------------------TCCTCAAGGGCCCTGCTCAGT-CTTTCAGGC---AGACA----CTCCCTACCTGCC--CCAGCCAGGGCTG-GGC---------------------TCCTGT-GCCTTTC-TGCCTGTGGCCTTTGGGGAGCAATAAGTGCTGGA-----------------CCCATCC--------------CTTAGTCAGAAAGCAAAGGGCCCATCACTGTCCTCTCACCCAAACAATAC--AGAGTTGCATGTAcccccccgttcccccccccgtccccctgccccccacccccacccccgcaccatccgccccaccGACT-- i mm10.chr11 I 1400 C 0 s canFam3.chr9 15751473 250 - 61074082 CCTACCTG----------------------------------TCCTTCTGGCTCCTGCCCACAT-TCCTCCTTC---TAGGTGGGGCTCTGTA-AGACCCAGCAGCCCCTGCTTGCAT---------------------TCCCACAGCCTTTCTTGTCTGTGGTCTTCCAGGCCAGCCAA-TCCTGGA--CAC----CCTGTGGCCTGTTCCGTGGCCTATCCCCACTGAATCACAGAGCTGA--GTCTGCTGTGGTCCTC-------AGAAAGGCAAGAAGCAGGT----------------ACTTTTGGCTCCATTGCCC------------------tcattcattcaacaagccag i canFam3.chr9 C 0 C 0 a score=1225245.000000 s hg38.chr17_GL383563v3_alt 308887 423 + 375691 cgctgggtgctgacgaggcaccaggcccgtgcCCAGC------------------------------------------------------------CGCTCAGTCTCGC-TGCTCGAGGGCTGGGCAGGG---GTTTTTTTTGTACCCCGGCAAGGCCCCTCATGGGGCACACGTAGGAGGTTTCACTTAATCCTGT-GGGTCTTTTTTAACCTTGGAAAGTAAATCCTTGGGCATCTTTAATGACTGGCAACTCCCGCTCCAGTGGACCCCAAATCCCTGCTCGTCTCTTCAT----CTG--ATGCTGT-------TCTCATTCCCAGGCAGAAACACTCTGCAAAGCCTCCAATGCAAATGAGATGTGAAATAACCTACTTCTCCCCCATC-----TCAAGTGCCAGCCCTCAGATTTTAACAGCCAC-AGCTCTGCCTACGTGTCCCC-----------AGAGGCATAGCTTGCTTTTGTCTTTTCTGAAAGGCCTG-AAACAGTGTAGGTGGAA s panTro4.chr17 284551 483 + 82630442 CGCTGGGTGCTGACCAGGCACCAGGCCCGTGCCCAGCTCAGTCCTCATTCAACACACACACGCTGGGTGCTGACCAGGCACCAGGCCCGTGCCCAGCCGCTCAGTCTCGC-TGCTCGAGGGCTGGGCAGGG---GTTTTTTTTGTACCCCCGCAAGGCCCCTCATGGGGTACACGTAGGAGGTTTCACTTAATCCTGT-GGGTCTTTTTTAACCTTGGAAAGTAAATCCTTGGGCATCTTTAATGACTGGCAACTCCCACGCCAGTGGACCCCAAATCCCTGCTCGTCTCTTCCT----CTG--ACGCTGT-------TCTCATTCCCAGGCAGAAACACTCTGCAAAGCCCCCAATGCAAATGAGATGTGAAATAACCTACTTCTCCCCCATC-----TCAAGTGTCAGCCCTCAGATTTTAACAGCCAC-AGCTCTGCCTACGTGTCCCC-----------AGAGGCATAGCTTGCTTTTGTCTTTTCTGAAAGGCCTG-AAACGGTGTAGGTGGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 164971 423 + 73212453 CGCTGGGTGCTGACGAGGCACCAGGCCCGTGCCCAGC------------------------------------------------------------CGCTCAGTCCCGC-TGCTCGAGGGCCGGGCAAGG---GTTTTCTCTGTACCCCCGCAAGGCCCCGCATGGGGCACACGTAGGAGGTTTCACTTAATCCTGT-GGGTCTTTTTTAACCTAGGAAAGTAAATCCTTGGGCATCTTTAATGACCGGCAACTCCCGCTCCAGTGGACCCCAAATCCCTGCTCGTCTCTTCAT----CTG--ACGCTGT-------TCTCATTCCCAGGCAGAAATGCTCTGCAAAGCCTCCAATGCAAATGAGATGTGAAATAACCTACTTCTCCCCCATC-----TCAAGTGCCAGCCCTCAGATTTTAACAGCCAC-AGCTCTGCCTACATGTCCCC-----------AGAGGCATAGCTTGCTTTTATCTTTTCTGAAAGGCATG-AAACAGTGTAGGTAGAA i ponAbe2.chr17 I 252 C 0 s nomLeu3.chr19 280372 424 - 81552678 CGCTGGATGCTGACGAGGGACCAGGCCCGTGCCCAGC------------------------------------------------------------CGCTCAGTCTCGCTTGCTCCAGGGCCAGGCGGGG---GTTTTCTTTGTACCCCTGCAAGGCCCTGCATGGGGCACATGTAAGAGGGTTCACTTAATCCTGT-GGGTCTTTTTTAACCTTGGAAAGTAAATCCTTGGGCATCTTTAATGACCGGCAACTCCCGCTCCAGTGGACCCCACATCCCTGCTCATCTCTTCAG----CTG--ATGCTGT-------CCTCATTCCCAGGCAGAAACGCTCTGCAAAGCCTCCAACCCAAATGAGACGTGAAATAACCTACTTCTCCCCCATC-----TCAAGTGCCAGCCCTCAGATTTTAACAGCCAC-AGCTCTGCCTACGTGTCCCC-----------AGAGGCACAGCTTGCTTTTGTCTTTTCTGAAAGGCCTG-AAATAGTGTAGGCAGAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 198928 436 + 80904711 CGCTGGGTGCTGACGAGGCACCAGGTCCTTGCCCAGC------------------------------------------------------------AGCTCAGTCTCGC-TGTTCGAAGGCTGGGCGGGGTTGTTCTCCTTTGTACCCC-GCAAGGCCTCGCATGGGGCACACGTAGGAGGTTTCACTGAATCCTGTGGGGTCTTTTTTCACCGAGGAAAGTAAATCCTTGGGCATCTTTAATGACAGGCAACTCCCCCTCCAGTGGACCCCAAATCCCTACTCGTCTCTTTGTCTAACTG--TTACTGT-------TCTCCTTCCCAGACAGAAACGCCCTGCAAAGCCTCCAACCCAAATGGTATGTGAAATAACCTACTTCTCCCCCATCTCGTTTCAAGTGCCAGCCCTCAGCTTTTAACAGCCAC-AGCTCTGCCTACGTGTCCCC-----------AGAGGCATAGCTTGCATTTGTCTCTTCTGAAAGGCCTGAAAACAGGGTAGGTAGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 210867 435 + 80997621 CGCTGGGTGCTGACGAGGCACCAGGTCCTTGCCCAGC------------------------------------------------------------AGCTCAGTCTCGC-TGTTCGAAGGCTGGGCGGGGTTGTTCTCCTTTGTACCCC-GCAAGGCCTTGCATGGGGCACACGTAGGAGGTTTCACTGAATCCTGTGGGGTCTTTTTTCACCGAGGAAAGTAAATCCTTGGGCATCTTTAATGACAGGCAACTCCCCCTCCAGTGGACCCCAAATCCCTACTCGTCTCTTTGTCTAACTG--TTACTGT-------TCTCCTTCCCAGACAGAAACGCCCTGCAAAGCCTCCAACCCAAATGGTATGTGAAATAACCTACTTCTCCCCCATCTCGTTTCAAGTGCCAGCCCTCAGCTTTTAACAGCCAC-AGCTCTGCCTACGTGTCCCC-----------AGAGGCATAGCTTGCATTTGTCTCTTCTGAAAGGCCTG-AAACAGGGTAGGTAGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 193610 426 + 74645514 CGCTGGGTGCTGACGAGGCACCAGGTCCTTGCCCAGC------------------------------------------------------------AGCTCGGTCTCGC-TGTTCGAGGGCTGGGCGGCGTT-TTCTCCTTGGTACCCC-GCAAGGCCTTGCGTGGGGCACACGTAGGAGGTTTCACTGAATCCTGT-GGGTCTTTCTTCACCTAGGAAAGTAGATCCTTGGGCATCTTTAATGACAGGCAACTCCCCCTCCGGTGGACCCCAAATCCCTACTCGTCTCTTCGT----CTG--TTACTG----------TCCTTCCCAGGCAGAAACGCCCTGCAAAGCCTCCAACCCAAAGGGTATCTGAAATAACCTACTTCTCCCCCATCTCGTTTCAAGTGCCAGCCCTCAGCTTTTAACAGCCAC-AGCCGTGCCTACGTGTCCCC-----------AGAGGCATAGCTTGCGTTTGTCTCTTCTGAAAGGCCTG-AAACAGGGTAGGTAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 193150 426 + 75148670 CGCTGGGTGCTGACGAGGCACCAGGTCCTTGCCCAGC------------------------------------------------------------AGCTCGGTCTCGC-TGCTCGAGGGCTGGGCGGGGTT-TTCTCTTTTGTACCCC-GCAAGGCCTCGCGTGGGGCACACGTAGGAGGTTTCACTGAATCCTGT-GGGTCTTTTTTCACCTAGGAAAGTAAATCCCTGGGCATCTTTAATGACAGGCAACT-CCCCTCCAGTGGACCCCAAATCCCTACTCATCTCTTCGT----CTG--TTACTGT---------TACTTCCCAGGCAGAAACGCCCTGCAAAGCCTCCAACCCAAATGGTATGTGAAATAACCTGCTTCTCCCCCATCTCGTTTCAAGTGCCAGCCCACAGCGTTCAACAGCCAC-AGCTCTGCCTACGTGTCCCC-----------AGAAGCATAGCTTGCATTTGTCTCTTCTGAAAGGCCTG-AAACAAGGTAGGCAGAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1000136 397 - 1291538 TGCTGGGTACTGACGAGGCACCAGGCCCACACCCAGC------------------------------------------------------------AGCTCCGTCTTAC-TGC-------CTGGGCAGGGGTGTTTTTCTTTGTACCCTCACATGGCCTCTCGTGGGGCCCATGTAGGAAGTGTCACTTACTCCTGT-GGATCTTTTTTAGCCTAGGAAAGTAAATCCTTGGACATCTTTAATGACCAAAACCTCCCACTCCAGTGGCCCCCAAATCCCTGCCCGTCTTTTCAT----CTAACATACTGTTC-----TCTCAGTCTCAGGCAGATATGCTCTGCAAAGCCTCCAATCCAAATGAGATGTGAAATTACCTACTTCTCCCCCAGC--ATCTCAAGTGCCAACCCTCGGA-TTTAACAGCCAC----------------------------------------AGCTTGCTTGTGTCTTTTCTGAAAGGCCTG-ACACAGGGCAGGCAGAA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75922435 383 + 122082543 CCCTGAG-GCTGAGTATGCAGCAGGCCTCAG--CAGC------------------------------------------------------------AGCTCAG-------TTCCTGGGGGCCTGGCAAAGGTGGCTTTTCTCGCACTCCTGCAA-GCCTCCCACAGTGTACTCACAAGACACCTTAAT----------ATGTTTTTTTTTATTT---------AATCCTTGGAT-TCTCTAAGGAGCTGGGATGCCCAGGCCAGT-GACCCTAAGTCCTAGCCTTCCTCTTTGT----CTA--ACTTGAAACAAACACTTTCTTCCCAGA----------GTGAAAAGCTTCCA--CTGAGTGAAATGTGAGAAAATTTCCTTCTTCCTTCTC-----------------------CTTTCA--AGCCACAAGCTCTGCCTGTGTGTCTCCCCCCACCCACAAGAGGTGCAGCTTACTTTTGTCATTTCTAAAAAGCCTG-ACATGGGGCAGGTAGGA i mm10.chr11 C 0 I 2748 s canFam3.chr9 15751723 385 - 61074082 ccctgagtgttga------------------ccgtat------------------------------------------------------------gtctgagtct-gc-tgct----gggtgagctggggCAGTTCTTTGTGCCCCCC-AGAAAGTCTCAGGTGG--------TAGGGGGCCTCCCTGATGTCGGC-AG---TGCCTCCCCCTATGGAAGTGAATCCT----CATCCACAATG----------CCCACTCTGTTGGGCCC-AAGCCCCTGCCCGTCTTTTTGTCTAACCG--AAACCGTTT-----TCTTATTCCCAGGATGAAATGCTATGGAAAGCCTCCAACCAAAATGAGATGCAAAGCATCCCACTTCTCCC---TCTCACTTCTAGAGCCAGCCCTCCAATTTTAACAGCCACAAGCTCTGCCTACATGTCCCT-----------AGAGGCACAGCTCGCTTTTGTCATTTCTGAAAGGTCTA-AAACAGGGCAGGGACAT i canFam3.chr9 C 0 C 0 a score=147057.000000 s hg38.chr17_GL383563v3_alt 309310 55 + 375691 CTGCTGTATCAAGGCAGTCACAGAGCTGAAGGTGG----TGACGGCAGGGAAACCAggc s panTro4.chr17 285034 55 + 82630442 CTGCTGTATCAAGGCAGTCACAGAGCTGAAGGTGG----TGACAGCAGGGAAACCAggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 165394 55 + 73212453 CTGCTCTATCAAGGCAGTCAAAGAGCTGAAGGTGG----TGACAGCAGGGAAATCAggc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 280796 55 - 81552678 CTGCCGTATCAAGGCAGTCACAGAGCTGGCGGTGG----TGACAGCAGGGTAACCAggc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 199364 55 + 80904711 CTTCTGTATCAAGGCAATCACGGAGCTGAAGGCAG----CAACAGCAAGGTAACCAggc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 211302 55 + 80997621 CTTCTGTATCAAGGCAATCACGGAGCTGAAGGCAG----CAACAGCAAGGTAACCAggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 194036 55 + 74645514 CTTCTGTATCAAGGCAATCACGGAGCTGAAGGCAG----CAACAGCAGGGtaaccaggc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 193576 55 + 75148670 CTTCTGTATCAAGGCAATCACGGAGCCGAAGGCAG----CAACAGCAGGGTCACCAggc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1000533 53 - 1291538 CTCTTGTATC--GGCAATCACAGAGCTGATGGCAG----CAACAGCACAGTAACCTggc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15752108 54 - 61074082 GTCCTAGATCAAAGCAGGCA-----CTGTTGGTGGGGCCCCACTACCGAGTAACCAGAC i canFam3.chr9 C 0 I 1295 e mm10.chr11 75922818 2748 + 122082543 I a score=730370.000000 s hg38.chr17_GL383563v3_alt 309365 280 + 375691 tgggcgtggtggctcacacctgtaaccccagcactttgggaagccaaggcaggaggatcgtttgagctcaggagttcgagaccagcctgggcaacagagcaagaccctgtctctaca-aaaaatttaaaacttagctgggcatggtggcacatacctgtagtctcagatactcaggaggctg----agaaggatcacttgagcccaggagacggaggctgcagtgagccatgattgcaccactgccctccagcctgggtaacagagcaagaccctgtctc-------aaaaa s panTro4.chr17 285089 280 + 82630442 tgggcgtggtggctcacacctgtaaccccagcactttgggaagccgaggcaggaggatcgtttgagctcaggagttcgagaccagcctgggcaacagagcaagaccccgtctctaca-aaaaatttaaaacttagccgggcatggtggcacatacctgtagtctcagatactcaggaggctg----agaaggatcccttgagcccaggagacagaggctgcagtgagccatgattgcaccactgcactccagcctgggtaagagagcaacaccctgtctc-------aaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 165449 283 + 73212453 tgggcgtggtggctcacacctgtaaccctagtactttgggaagccaaggcagaaggatcgtttgagctcaggagttcgagaccaacctgggcaacagagcaagaccacatctctaca-aaaaatttaaaaattagctgggcgtggtggcacgcacctgtagtctcagatactcaggaggctga-gcagaaggatcacttgagcccaggagacggaggctgcagtgagccatgatcgtaccactgcactccagcctgggtaacagagcaagaccctgcctc-------aaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 280851 282 - 81552678 tgggcgtggtggctgacacctgtaaccctagcac-ttgggaagccgaggcaggaggatcgtttgagctcaggagttcgagaccagcctgggcaacagagcaagaccctgcgtctaca-aaaaatttaaaaattagccgggagtggtggtatgcacctgtagtctcagatactcaggaggctgg-gcagaaggatcacttgagcccaggagacggaggctgcagtgagccatgatcgcaccactgcactccagcctcggtaacagagcaagaccctgtctc-------aaaaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 199419 242 + 80904711 tgggcgtggtggctcgcacctgtgatcctggcgctttgggaagccaagttgggaggactttttgagcccaggagttcaagaccagcctgggcaacagagcaaggctgcgtctctacagaaaaatgtagaaattagccgggcacgttggcatgcacc-------------------------------------------gggcccaggagatggaggctgcagtgagccatgatcgcgccactgcactccagcctgggtaacagagcaagactctgtctc-------aaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 211357 291 + 80997621 tgggcgtggtggctcgcacctgtgatcctggcgctttgggaagccaaggtgggaggactttttgagcccaggagttcaagaccagcctgggcaacagagcaaggctgcatctctacagaaaaatgtagaaattagccgggcacgttggcatgcacctgtagtctcagatactcaggaggctga-gcagaaggatcacttgggcccaggagatggaggctgcagtgagccatgatcgcgccactgcactccagcctgggtaacagagcaagactctgtctcaaaaaaaaaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 194091 284 + 74645514 tgggcgtggtggctcacacctgtgatcctggcactttgggaagccaaggtgggaggactttttgagcccaggagttcaagaccagcctgggcaacagagcaaggccgcgtctctacaaaaacatttagaaattagccgggcacggtggcatgcacctgtagtctcagatactcaggaggctga-gcagaaggatcacttgagcccaggagatggaggctgcagtgagccatgatcgtgccactgcattcctgcctgggtaacagagcaagaccctgtctc-------aaaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 193631 284 + 75148670 tgggcgtggtggctcacacctgtgatcctagcgctttgggaagccaaagtgcgaggactttttgagcccaggagttcaagaccagcctgggcaacagagcaaggc-gcatctctacaaaaaaatttagaaattagccaggcacagtggcatgcacctgtagtctcagatactcaggaggctga-gcagaaggatcacttgagcccaggagatggaggctgcagtgagccaccatcgcgccactgcactccagcctgggtaacagagcaagaccctgtctc------aaaaaa i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1000586 278 - 1291538 tgggcgcagaggctcacacctgt-atcctagcactttgggaagctgaggtgtgaggattgtttgagccc-ggagttcaagaccagcctgggcaacacagcaagaccccatctctacaaaaaaatttaaaatttagccaggtgtggtggcacgcaactgtagttccagctactcaggaggctgaggcagaagaatcacttgagcccaggagatggaggctgcagggagccatgatggcaccaccacactccagcctgggcaacagagcaagaccccgtctc------------ i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75922818 2748 + 122082543 I e canFam3.chr9 15752162 1295 - 61074082 I a score=122376.000000 s hg38.chr17_GL383563v3_alt 309645 70 + 375691 aaaaaaaa--------TTTACAGGGTA-AC--------CACACagagagagagag--------------aa----------agagagaagagaaaatgaaaTTCAAACTTA s panTro4.chr17 285369 74 + 82630442 aaaaaaaa----aaaaTTTACAGGGTA-AC--------CACACagagagagagag--------------ag----------agagagaagagaAAATGAAATTCAAACTTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 165732 78 + 73212453 aaaaaaaaaaaaaaaaTTTACAGGGTA-AC--------CACagagagagagagag--------------ag----------agagagaagagaAAATGAAATTCAAACTTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 281133 64 - 81552678 aaaaaaaa--aaaaaaTGTGCAGGGTA-AC--------CACACAG------------------------------------AGAGAGAAGAGAAAATGAAATTCAAACTTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 199661 59 + 80904711 aaaaaaaa-------aTGTACAGGCTA-AC--------------------AAGAG--------------AG----------AGAGAGAGAAGAAAATGAAATTCAAACTTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 211648 59 + 80997621 aaaaaaaa-------aTGTACAGGCTA-AC--------------------gagag--------------ag----------agagagagaagaAAATGAAATTCAAACTTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 194375 61 + 74645514 aaaaaaaa-------atgtacagggta-ac------------------gagagag--------------ag----------agagagagaagaaaatgaaattcaaactta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 193915 69 + 75148670 aaaaagaa-------aTGTACAGGGTA-AC--------------------gagag--------------agagagacaaacagagagaggagaAAATGAAATTCAAACTTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1000864 77 - 1291538 -aaaaaaa-------aTGTACAGGGTT-ACCCCCGCCACACACACGCACACACAG--------------GG----------A-AAAAAAGAGGAAATGGAATTCTAACTTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15753457 85 - 61074082 -agaaaga-------ttccacaggattcac--------cagactatcaaagaaaggtggtcgatggcacaa----------aaaaagAACAGGAGATAGAATTAGAGCTCG i canFam3.chr9 I 1295 C 0 e mm10.chr11 75922818 2748 + 122082543 I a score=312584.000000 s hg38.chr17_GL383563v3_alt 309715 134 + 375691 CTGCAAACGTGACCAGAATAATACG-----------------TAGGTACCTGTGGCCCCTGAGCACTCTCTGCCCAGAAAATGCCCAAGTGCTCCCAGG-CTGCCGGGCACCTGGCTTGGGACGGGCAGTATCGAGCATTCATGCTATTTGT s panTro4.chr17 285443 134 + 82630442 CTGCAAACGTGACCAGAATAATACG-----------------TAGGTACCTGTGGCCCCTGAGCACTCTCTGCCCAGAAAATGCCCAAGTGCTCCCAGG-CTGCCGGGCACCTGGCTTGGGATGGGCAGTGTCGAGCATTCATGCTATTTGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 165810 134 + 73212453 GTGCAAACGTGACCAGAATAATACG-----------------TAGGTACCTGTGGCCCCTGAGCGCTCCCTGCCCAGAAAATGCCCAAATCCTCCCGGG-CTGCTGAGCACCTGGCTTGGGATGGGCAGTGTCAAGCATTCATGCTATTTGT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 199720 133 + 80904711 GTGCAAAGGTGACCAGAATAATACG-----------------TAGGTACCCGTGGCCCCTGGGCTCTCTCTGCCCAGAACATGCCCAAGTCCTCCCGGG-CTGT-GGGCACCGGGCTTGGGACGGGCAGTGTCGAGTGTTCAAGCTCTTTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 211707 133 + 80997621 GTGCAAAGGTGACCAGAATAATACG-----------------TAGGTACCCGTGGCCCCTGGGCTCTCTCTGCCCAGAACACGCCCAAGTCCTCCCGGG-CTGC-GGGCACCGGGCTTGGGACGGGCAGTGTCGAGTGTTCAAGCTCTTTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 194436 134 + 74645514 GTGCAAAGGTGACCAGAATAACACG-----------------TAGGTACCCGTGGCCCCTGGGCTCTCTCTGCCCAGAACACGCCCAAGTCCTCCCGGG-CTGCGGGGCACCGGGCTTGGGACGGGCAGTGTCAAGTATTCAAGCTATTTGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 193984 134 + 75148670 GTGCAAAGGTGACCAGAATAATACG-----------------TAGGTACCCGTGGCCCCTGGACTCTGTCTGCCCAGAACACGCCCAAGTCCTCCCGGG-CTGCGGGGCACCGGGCTCGGGACGGGCAGCGTCGAGTACTCGTGCTATTTGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1000941 133 - 1291538 GCACAAAGGTGACCAGAATAACACA-----------------TAGGCGCCTGTGGCCCCTGGG--CTCTCTGCTCAGAAAACACCTCAGTCCTCCCAGGACTGCCAGGCACCTGGCTTGGGACGAGCCATGTCCAGCGTTAATACTATTTGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15753542 146 - 61074082 --ATTAACATTACCAGGAGAAAACAAGCTTTATCAGGATAATCAGGTATCTGTGGCCCCAGGG---ACTCTGCTCAGAAAATGCTCAAGTCCTCCAGGG-CCACCAGGCACCTGGCTTAGGGTACACAGTAAAGGGTGTTAGTGCTGCTTAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75922818 2748 + 122082543 I e nomLeu3.chr19 281197 0 - 81552678 C a score=311640.000000 s hg38.chr17_GL383563v3_alt 309849 100 + 375691 CTTTTAATGCAGAAACGCAGGCCTGCTTCCATTTACGTGATGTATGTGGGTCTGGAAA--GTCCCAGGCAGGCAGAATCTTTGCAGAGGAAACCTGATTTCG s panTro4.chr17 285577 100 + 82630442 CTTTTAATGCAGAAACGCAGGCCTGCTTCCATTTACCTGATTTATGTGGGTCTGGAAA--GTCCCAGGCAGGCAGAATCTTTGCAAAGGAAACCTGATTTCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 165944 100 + 73212453 CCTTTAATGCAGAAATACAGGCCTGCTTCCATTTATGTGATTTATGTGGGTCTGGAAA--GTCCCAGGGAGGCAGAATCTTTGCATAGGAAACCTGATTTCG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 199853 100 + 80904711 CTTTGAATGCAGAAATGCAGGCCTGCTTCCGTTTACGTGATTTATGTGGGTCTGGAAC--GTCCCAGGCAGGCGGAATCTTTGCAGAGGAAACCTGATTTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 211840 100 + 80997621 CTTTGAATGCAGAAATGCAGGCCTGCTTCCGTTTACGTGATTTATGTGGGTCTGGAAC--GTCCCAGGCAGGCGGAATCTTTGCAGAGGAAACCTGATTTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 194570 100 + 74645514 CTTTGAATGCAGAAATGCAGGCCTGCTTCCGTTTACGTGATTTATGTGGGTCTGGAAC--GTCCCAGGCAGGCGGAATCTTTGCAGAGGAAACCTGACTTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 194118 100 + 75148670 CTTTGAATGCAGAAATGCAGGCCTGCTTCCGTTTACGTGATTTATGTGGGTCTGGAAA--GTCCCAGGCAGGCGGAATCTTTGCAGAGGAAACCTGATTTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1001074 100 - 1291538 CTTATAATGCAGAGATGCAGGCCTGCTTCCATTTACACGAGTTATGTGGGTCTGGAAA--GTCCCAGGCAGGCAGAATCTTTGCAGAGGAAACCTGATTTCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75925566 100 + 122082543 ctcttcatgcagAAATATA-ACCTGCTTCCACGTATGGGACTTATG-GGACCTGGAAACCCCCCCAGGCCAACATAATTTCTGCAAAGGAAATCTGATTTTA i mm10.chr11 I 2748 C 0 s canFam3.chr9 15753688 98 - 61074082 CTTTCAGTACAGAAAGGCAAGCCTGCTTCCATGGATGTAATTTGTGTGTGTCTGAAAA--GTCGTAGACAAAC--AATTTTTGCAAAGGAAATCTGAGTTTA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 281197 0 - 81552678 C a score=2880848.000000 s hg38.chr17_GL383563v3_alt 309949 979 + 375691 GCTCCCACCTGGGAACTGCTTGTTGAAGGAGCCCAAGAGAAACCTCTCCATGAAGCAGAGAAGCTTCTAGGG-AAAAAGAAGCCTCAACCCTCCTCACCCGCTTGGAAAAGGCCCAGTCCTCAGGTGT----------------------------------GCTG---AG----------------------GGCGGTGCTCCAGGCCCCGGGGGGCAGCGTCCCACA-CCCCTGCCTCCGCCAGCAGCTTC----------TGCACGGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCGCGGGTCCTGCCAGGTACTTCTCCAACCTTCCTCCCCTCA----CCTCACCAGAGCCAGGG---------------------TTTGCTTACAGCCAGCAGCCAAGGCCATCCCCGGCTGACCTCGCCTGCTATCTGTGGGCCCAGCTGTCTCCTCTTGCTCACAGAAACACAAACAGGCG--TTTCTCTGTTGCAACTCCAGGGTTAGGCACTGCCCTGCCTGGGAACAA------GCTGTCCGGTTCTCTGCACACTACCCATTCTCCTGGCAGAGGCTAAGACCCCAAATAAGTGAGAA------------TGCCCATAA--------------------------------------------------------------------------------------GAGGGCCAGCGG---AGGGCTCAGG-CAACAGTGGGGGCCA-CCCCAGAACATGGCTTGCTACAGAGAAGACAGGCAGGGGGAAGGGT-CAGACAGAACCACTGGCACTTAGCTAGGAGTTTTCAGGGCCTCTAGGAGGGGCCCCCAAGTTAACAAACATCCCTACACGTGCCCAG-CCTGACCCTGCACTACCAAACTGGGAG-AG-GAAGAAGCCGCCTCCAT-GGGTGCTGCCCACCTGCCAGGTGCCCGCCACTGGCTGACCAACTGGaa-tcatcacaagccccagagg-acgacgtgatcatca-ctc-ctttcag-----aaaagaa----gaaaccag-ctc--gagaggggcagccacgtgcccaaggccccataagctggcaCCAGGTGCCCAGTTTGGCCCAACGGAGCTGGGCTGAGCCCAGGTGCTTTCTAT--CCCCCTCCTCCTCCCAAGGCG-TCGGGTTGCAG-GT--GCGGTGCCT-ACAGGTG s panTro4.chr17 285677 971 + 82630442 GCTCCCACCTGGGAGCTGCTTTTTGAAGGAGCCCAAGAGAAACCTCTCCATGAAGCAGAGAAGCTTCTAGGG-AAAAAGAAGCCTCAACCCTCCTCACCCGCTTGGAAAAGGCCCAGTCCTCAGGTGT----------------------------------GCTG---AG----------------------GACGGTGCTCCAGGCCCCGGGGGGCAGCGTCCCACA-CCCCTGCCTCCGCCAGCAGCCTC----------TGCACGGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCGTGGGTCCTGCCAGGTACTTCTCCAACCTTCCTCCCCCCA----CCTCACCAGAGCCAGGG---------------------TTTGCTTACAGCCAGCAGCCAAGGCCATCCCCGGCTGACCTCGCCTGCTATCTGTGGGAAGGGCTGTCTCCTCTTGCTCACAGAAACACAAACGGCCT--TAAATGTGTTGCAACTCCAGGGTTAGGCACTGCCCTGCC-GGGAACGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------NNNNNNNNN--------------------------------------------------------------------------------------NNNNNNNNNNNN---NNNNNNNNNN-NNNNNNNNGGGGCCA-CCCCAGAACAT-GCTTGCTACAGAGAAGACA-GCAGGGGGAAGGGT-CAGACAGAACCACTGGCACTTAGCTAGGAG-TTTCAGGGCCTCTAGGAGGGACCCCCAAGATAACAAACATCCCTACACGTGCCCAG-CCTGACCCTGCACTACCAAACTGGGAG-AG-GAAGAAGCCGCCTCCAT-GGGTGCTGCCCATCCGCCAGGTGCCCACCACTGACTGACCAACTGGAA-TCATCACAAGCCCCAGAGG-ACAACGCGATCATCA-CTC-CTTACAG-----AAAGGAA----GAAACCAG-CTC--AAGAGGGGCAGCCACTTGCCCAAGGCCCTGTAAGCCAGCACCAGGTGCCCAGTTTGGCCCAAAGGAGCTGGGCTGAGCCCAGGTGCTTTCTAT--CCCCCTCCTCCTCCCAAGGCG-TCGGGTTGCAG-GT--GT-----------GGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 166044 1060 + 73212453 GCTTCCACCTGGGAGCTGCTTGTTGAAGGAGCCC--GAGAAACCTCTCCATGAAGCAGAGAAGCTTCTGGGG-AAAAAGAAGGCTCACCCCTCCTCACCCGCTTGGAAAAGTCCCAGTCCTCAGGTGT----------------------------------GCTG---AG----------------------GGCGATGCTCCAGGCCCCGGGGGGCAGCGTCCCACA-CCC--GCCTCCGCCAGCAGCCTC----------TGCACAGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCATGGGTCCTGCCAGGTACTTCTCCAACCTTCCTCCCC-CA----CCTCACCAGAGCCAGGG---------------------TTTGCTTACAGCCAGCAGCCAAGGCCATCCCCGGCTGACCTCGCCTGCTATCTGTGGGCCCAGCTGTCTCCTCTTGCTCACGGAAACACAAACAGACG--TTTCTCTGTTGCAACTCCAGGGTTAGGCACTGCCCTGCCTGGGAACAA------GCTGTCTGGTTCTCTGCACACTCCCCATTCTCCTGCCAGAGGCTAAGACCCCAAATAAGTGACAG------------TGCCCGTAAGGGGCCAGCGGAGGGCTCAGGCGACAGTGGGGGCCAGCGGAGGGCTCAGGCGACAGTGGGGGCCAGCGGAGGGCTCAGGCAACAGTGGGGGCCAGCGG---AGGGCTCAGG-CGACAGTGGGGGCCA-CCCCAGAACATGGCTTGCTACAGAGAAGACAGACAGGGGGAAGGGT-CAGACAGAACCACTGGCACTTAGCTAGGAGTTTTCAGGGCCTCTAGGAGGGGCCCCCAAGTTAACAAACATCCCTACACGTGCTCAG-CCTGACCCTGCACTACCAAACTGGGAG-AG-GAAGAAGACGCCTCCAT-GGGTGCTGCCCACCTGCCAGGTGCCTGCCACTGGCTGACCAACTGGAA-TCATCACAAGCCCCAGAGG-ACGATGCGATCATCA-CTC-CTTCCAG-----AAAAGAA----GAAACCAG-CTC--AAGAGGGGCAGCCACTTGCCCAAGGCCCCGTAAGCCGGCACCAGGTGCCCAGTTTGGCCCAATGGAGCTGGGCTGAGCCCAGGTGCTTTCTAT--CCCCCTCCTCCTCCCAAGGCG-TCGGGTTGCAG-GT--GCGGTGCCT-ACAGGTG i ponAbe2.chr17 C 0 I 1477 s nomLeu3.chr19 281197 1010 - 81552678 GCTGCCACCTGGGAGCTGCTTGTTGAAGGAGCCCAAGAGAACCCTCTCCATGAAGCAGAAAAGCTTCTGGGGAAAAAAGAAGGCTCACTCCTCCTCACCTGCTTGGAAAAGGCCCAGTCCTCAGGTGTGCTGAGTCCTCAGGTGTGCTGAGTTCTCAGGTGCGCTG---AG----------------------GGTGGTGCTCCAGGTCCCGGCGGGCAGCATCCCACA-CCCCTGCCTCCGCCAGCGGCCTC----------TGCACGGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCAC-GGTCCTGCCAGGTACTTCTCCAACCTTCCTCCCCCCA----CCTCACCACAGCCAGGG---------------------TTTGCTTACAGCCAGCAGCCAAGGCCATCCCCGGCTGACCTCGCCTGCTATCTGTGGGCCCAGCTGTCTCCTCTTGCTCACAGAAACACAAACAGACG--TTTCTCTGTTGCAACTCCAGGGTTAGGCACTGCCCTGCCTGGGACCA-------GCTGTCCGGTTCTCTGCACACTCCCCACTCTCCTGGCAGAGGCTAAGACCCCAAATAAGTAAGAG------------TGCCCATAA---------------------------------------------------------------------------------------GGGCCCAGCAG---AGGGCTCAGG-CAACAGTGGGGGCCA-CACCAGAACATGGCTTGCTACAGAGAAGACGGGCAGGGGAAAGGGT-CAGACAGAACCACTGGCACTTAGCTAGGAGTTTTCAGGGCCTCTAGGAGGGGCCCCCAAGTTAACAAACATCCCTACACATGCCCAG-CCTGACCCTGCACTACCAAACTGGGAG-AG-GAAGAAGCCGCCTCCAT-GGGTGCTGCCCACCTGCCAGGTGCCCGCCACTGGCTGACCAACTGGAA-TCATCACAAGCCCCAGAGG-ATGACACGACCATCA-ctc-cttctag-----aaaagaa----gaaaccag-ctc--gagaggggcagctacttgcccaaggccccataAGCCGGCACCAAGTGCCCGGTTTGGCCCAGTGGAGCTGGGCTGAGCCCAGGTGCTTTCTA---CCCCCTCCTCCTCCCAAGGCA-TCAGGTTGCAG-GT--GCGGTGCCT-GCAGGTG i nomLeu3.chr19 C 0 I 815 s rheMac3.chr16 199953 959 + 80904711 GCTCCCACCCGGGAGCTGCTTGTTGCAGGAGCCCGAGAGAAACCTCTCCATGAAGCAGAGAAGCTTCTGGGGAAAAAAGAAGGCCCA-CCCTCCTCACCTGCCTGAAAAAGTCCCCGTCCTCGGGTGT----------------------------------GCGG---AGTCCTC-----------------GGGTGTGCTCCAGGTCCTGGGGAGCAGCGTCCCACA-CCCCTGCCTCCCCCAGCGGCCTC----------TGCACTGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCGCGGGCCCTGCCCGGTACTTCTCCAGCCTTCCTGGCCCCA----CCTCACCAGAGCCAGGG---------------------TTTACTTACAGCCAGCAGCCAAGGCCATTCCCGGCTGACCTCGCCGGCTATCTGTGGGCCCAGCTGTCTCCTCTTACTCACAGAAACACAAACAGACG--TTTCTCTGTTGCAACTCCAGGGTTAGGCACTGCCCTGCCTGGGAACCA------GCTGTCCGGTTCTCTGCACACTCCCCATTCTCCTGGCAGACGCTAAAGCTCCAAATAAGTAAGGG------------TGCCCATAA--------------------------------------------------------------------------------------GGAGGCCAGCTG---AGGGCTCAGG-CAATAGTGGGGGAC----CTAGAACACGGCTTGGGACTGAGAAGGCGGGCA-GGGAAAGGGT-CAGACACAACCACTGGCACTTAGCT---AGTTTTCAGGGCTTCTAGGAGGAGCCCTCAAGTTAACAAACGTCCCTACACATGCTCAA-CCTGACCCTGCGCTACCAAACTGGGAG--G-GGGGAAGCCACCTTCAT-GGGTGCTGCCCACCTGCCAGGTGCT-GCTACTGGCCGGCCAAGTGGAA-TCATCACAAGCCCAAG-------ACGCAACCATCA-CTC-CTTCCAG-----AAAAGAA----GAAACCAG-CTC--GAGAGGTGCAGCCACTTGCCCAAGACCCCGTAAGCCGGCACCAGGTGCCTGGTTTGGCCCAACGGAGCTGGGCTGAGCCCAAGTGCTTTCTAT--CCCCCTCCGCCTCCCAAGGCA-Ctgggttgcag-gt--gtggtg----------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 211940 959 + 80997621 GCTCCCACCCGGGAGCTGCTTGTTGCAGGAGCCCGAGAGAAACCTCTCCATGAAGCAGAGAAGCTTCTGGGGAAAAAAGAAGGCCCA-CCCTCCTCACCTGCCTGAAAAAGTCCCCGTCCTCGGGTGT----------------------------------GCGG---AGTCCTC-----------------GGGTGTGCTCCAGGTCCTGGGGAGCAGCGTCCCACA-CCCCTGCCTCCCCCAGCGGCCTC----------TGCACTGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCGCGGGCCCTGCCCGGTACTTCTCCAGCCTTCCTGGCCCCA----CCTCACCAGAGCCAGGG---------------------TTTACTTACAGCCAGCAGCCAAGGCCATTCCCGGCTGACCTCGCCGGCTATCTGTGGGCCCAGCTGTCTCCTCTTACTCACAGAAACACAAACAGACG--TTTCTCTGTTGCAACTCCAGGGTTAGGCACTGCCCTGCCTGGGAACCA------GCTGTCCGGTTCTCTGCACACTCCCCATTCTCCTGGCAGACGCTAAAGCTCCAAATAAGTAAGGG------------TGCCCATAA--------------------------------------------------------------------------------------GGAGGCCAGCTG---AGGGCTCAGG-CAATAGTGGGGGAC----CTAGAACACGGCTTGGGACTGAGAAGGCGGGCA-GGGAAAGGGT-CAGACACAACCACTGGCACTTAGCT---AGTTTTCAGGGCTTCTAGGAGGAGCCCTCAAGTTAACAAACGTCCCTACACATGCTCAA-CCTGACCCCGCGCTACCAAACTGGGAG--A-GGGGAAGCCACCTTCAT-GGGTGCTGCCCACCTGCCAGGTGCC-GCTACTGGCCGGCCAAGTGGAA-TCATCACAAGCCCAAG-------ACGCAACCATCA-CTC-CTTCCAG-----AAAAGAA----GAAACCAG-CTC--GAGAGGTGCAGCCACTTGCCCAAGACCCCGTAAGCCGGCACCAGGTGCCTGGTTTGGCCCAACGGAGCTGGGCTGAGCCCAAGTGCTTTCTAT--CCCCCTCCGCCTCCCAAGGCA-Ctgggttgcag-gt--gtggtg----------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 194670 975 + 74645514 GCTCCCACCCAGGAGCTGCTTGTTGCAGGAGCCCGAGAGAAACCTCTCCATGAAGCAGAGAagcttctggggaaaaaaaaaggccca-cCCTCCTCACCTGCCTGGAAGAGTCCCCGTCCTCGGGTGT----------------------------------GCGG---AGTCCTCGGGTGTGCAGAGTCCTTGGGTGTGCTCCAGGTCCTGGGGAGCAGCGTCCCACA-CCCCTGCCTCCCCCAGCGGCCTC----------TGCACAGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCGCGGGCCCTGCCCGGTACCTCTCCAGCCTTCCTGGCCCCA----CCTCACCAGAGCCAGGG---------------------TTTACTTACAGCCAGCAGCCAAGGCCATTCCCGGCTGACCTCGCCAGCTATCTGTGGGCCCAGCTGTCTCCTCTTactcacagaaacacaaacagaCG--TTTCTCTGTTGCAACTCCAGGGTTAGGCACTGCCCTGCCTGGGAACCA------GCTGTCCGGTTCTCTGCACACTCCCCATTCTCCTGGCAGATGCTAAAGCTCCAAATAAGTAAGGG------------TGCCCATAA--------------------------------------------------------------------------------------GGAGGCCAGCTG---AGGGCTCAGG-CAACAGTGGGGGAC----CTAGAACACGGCTTGGGACTGAGAAGGCGGGCA-GGGAAAGGGT-CAGACACAACCACTGGCACTTAGCT---AGTTTTCAGGGCTTCTAGGAGGAGCCCTCAAGTTAACAAACGTCCCTACACATGCTCAA-CCTGACCTTGCGCTACCAAACTGGGAG----GGGGAAGCCACCTTCAT-GGGTGCTGCCCACCTGCCAGGTGCC-GCCACTGGCCGGCCAAGTGGAA-TCATCACAAGCCCAAG-------ACGCGACCATCG-CTC-CTTCCAG-----AAAAGAA----GAAACCAG-CTC--GAGAGGTGCAGCCACTTGCCCAAGACCCCGTAAGCCGGCACCAGGTGCCTGGTTTGGCCCAACGGAGCTGGGCTGAGCCCAAGTGCTTTCTat--ccccctctgcctcccaaggca-CTGGGTTGCAG-GT--GTGGTG----------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 194218 963 + 75148670 GCTCCCACCCGGGAGCTGCTTGTTGCAGGAGCCCGAGAGAAACCTCTCCATGAAGCAGAGAAGCTTCTGGGGAAAAAAGAAGGCCCA-CCCTCCTCACCTGCCTGGAAAAGCCCCCGTCCTCGGGTGT----------------------------------GCGG---AGTCCTC-----------------GGGTGTGCTCCAGGTCCTGGGGAGCAGCGTCCCACACCCCCTGCCTCCCCCAGCGGCCTC----------TGCACAGCCCAGCCCAGACTCCAGCTCCCAGGTGGCTCTCCGCCAGCCCTGCCCGGTACTTCTCCAGCCTTCCTGGCCCCA----CCTCACCAGAGCCAGGG---------------------TTTACTTCCAGCCAGCAGCCAAGGCCATTCCCGGCTGACCTCGCCGGCTATCTGCGGGCCCAGCTGTCTCCTCTTACTCACAGAAACACAAACAGACGTTTTTCTCTGTTGCAACTCCAGGGTCAGGCACTGCCCTGCCTGGGAACCA------GCTGTCCAGTTCTCTGCACGCTCCCCATTCTCCTGGCAGACGCTAAGGCTCCAAATAAGTCAGGG------------TGCCCATCA--------------------------------------------------------------------------------------GGAGGCCAGCTG---AGGGCTCAGG-CAACAGTGGGGGGC----CCAGAACACGGCTTGGGACAGAGAAGACGGGCA-GGGAAAGGGT-CAGACACAACCACTGGCACTTAGCT---AGTTTTCAGGGCTTCTAGGAGGAGCCCTCCAGTTAACAAACGTTCCTACACGTGCTCAG-CCTGACCCTGCGCTACCAAACTGGGAG-AG-GGGGAAGCCGCCTTCAT-GGGTGCTGCCCACCTGCCAGGTGCC-GCCACCGGCCGGCCAAGTGGGA-TCATCACAAGCCCAAG-------ACGCGACCATCA-ctc-cttccag-----aaaagaa----gaaaccag-ctc--gagaggtgcagccacttgcccaaggccCCTTAAGCCGGCACCAGGTGCCTGGTTTGGCCCAACAAAGCTGGGCTGAGCCCAAGTGCTTTCTAT--CCCCCTCCGCCTCCCAACGCA-CTGGGTTGCAG-GT--GTGGTG----------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1001174 969 - 1291538 GCTCCCACCTGGGAGCTGCTTGTTGAAGGAACCCAGAAGAAACCTCTCCATGAGGTAGAGAAGCTTCTGGGG---AAAGAAGGCCCACCCCTCCTCACCTGCTGGGAAAAGTCCCAGGCCTCGGGTGT----------------------------------ACAG---AA----------------------GGTAGTGCTCCAGGTCTCGGGG-GCGGCCTCCCGCA-CCGCTGCCTCCCCCAGTGGCTTC----------CGTGCGGCCCAGACCAGGCTCCAGC-CCCAGGTGGCTCTCCACCGGCCCTGCCAGGCTCTTCTCCACCCTTTCTCCGCCCA----CCTCACCGGAGCCAGGG---------------------TTTGCTTACAGCTGGTAGCCAAGGCAATCCCCAGCTGACCTCACCTGCTATCTGTGGGCC-AGATGTCCCCTCTTGCTCACAGAAACACAAACAGACG--TTTCTCTGTTGCAACCCCAGGGTGAGGCACCAGCCTTCCTGGGAACCA------GCTGTCCAGGTCTCTGCACACTCCCCCTTCTCCTGGCAGAGGCTAAGACCCCAAACAAGTGGGGG------------TGCCCATAA--------------------------------------------------------------------------------------AGGGGTCACCTG---AGGGCTCAGC-CAACATGGGAGGCCA-CCCCAGAACACAGCCTGGTACAGAGAAGAGTGGCAGGGGAAAGGCT-CAGACAGAACCCCTGGCACTGAGCTGGGAGTTTTCAGAGCTTCTAGGAAGAGCTCACAAATTAACAAATGTCCCTGCACTTGCTCAG-CCTGACCCTGCACTCCCAAACCAGGAG-AG-GAAGAAGCCGCCTTCAT-GGGTGCTGCCCGCCTGCCAGGTGCCCACCACTGGCTGACCAACTGGAA-TCATCACAAGCCCAAGAGG-ATGAGGCGACCATCA-CTC-CTTCCAGAAGCAAAGAGAA----GAAACCAG-CTT--GAGAGGGGCAGCCACCTGCTCAAGGCCCCAAAAGCTGGCACCAGGTGCCCTGTTTGGCCCAGCCAAGCTGGGCTGAGCCCAGGTGCTTTCCAT--TCCCCTCTGCCTCCCAGGCAC-CCCAGCTGCAG-GC--ATGGTG----------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75925666 921 + 122082543 GTTCCCACCTGGGTACTGCTTATTGAAGGAGCCAAACAGAAA--TCACCAGGAGAC--AAAAACCCCTG------AAAGAAAGCCCC-CTCTCCTTACCTGCCAGGTGGAGGCCAGCAGCT----TGT----------------------------------T------------------------------GGGTGGTCCCCAGGTCCC--TGAGTAGCCT----CA-CCTACACCTTTCAGAGCAGCCTC----------TGAGCAGCCCAGGCTAGAAACTAACTCTCATGTTGTTCTC----AGTCCCACCAGGCACTTCTCCATCCTTCTTCCGCCCAAGCTCCTGGCTCTGGCT---G---------------------TTTGCTTAAAGCCAGCCGCCAAGGCAACCCTCAGCTGACCTAGCCTGCTATC--AGGGGCCAGCTGTCCCCTCTCGTTCCTGGAAACACAAACA--CG--TTTCTCTGTCCCAGATCCAAGGTTAAGTGCCATGCTGCTGAGGAGCCA------GCTGTCTACCTCTCTGCAGGTCAC------------------CTAGGACCCTAAATAAACAAAGG------------TGCCCACCA----------------------------------------------------------------------------CGGGCATCTTCAGGGTCAGCCGCCTCGGCTCCATG-CAACAGTGGGGACTA---CCAGAATAGGACTTG----------GATGGGTTAGAGGGAGGGTCCAGACAAAACCAGTGGCACATAGCCGGGAGTCTTTGAGGTTTTTAACAAGCTCCCACAAAGTAAAAACCA--CACGCACAGGTTCAA-TGCGACCCTGAGCTACCAAAGAGGGAA-GGCAAGGCGGCCAGCCTTAT-AGGTGCTGCCTGCCCGCTGGGCATTTGCCACAGGCTGA-TAGCTGGCA-CTCACATATGCCCATGGGG-ATGACAAGGTGACTG-TTCTCTTACAA-----------A----GAAACCAA-GTCCAGAGAGCTGCCTCCATCTGCTTGGTTCCCCAT-AGCTGCCA-CAGTGGTCTAATTTGATTT----GAACTAGGCTGAGCCTTGGGGCTTCCC----CACACCCCTGCTCCAGGAAGA-CCTGGCTGCTG-GCAGGTGGTTCCTAACAAGGG i mm10.chr11 C 0 I 3 s canFam3.chr9 15753786 977 - 61074082 GTTCGCACCTGGGAGCAGCTTGTTGGAGGAGCCCAGTAGAAACTTCTCTGTGAAGCAGAGAAACCTCTGGAA-GGAAAGCATGTTCACCCCTTCTCACCTGCTTGGTAAAGTCCCAATCTTCAGGTAT----------------------------------GCTGCCAGG----------------------GGCAGTCCTCCAGGTCCC-TGGATCAGC-TTCTGCA-CCGCTGCCACCCCCAGTGCCCACCCCCCCCCCGCCCCCAGTCCTGCTAGGACACCAGTTCTCAGGTGGTTCTTCTCAGGCTCTGCCAGGTACTTCTCCACTCTTCTTCCACCCA----CTTCACCAGAGCCTGGGTGGGAACCCTGGCCCTGGCTATTTGTTTAAAGCCAGCAGCCAAGGCAAGCCCCAGCTGACCTAGCCTGCTATCTGCCAGCC-AGCTGTCCCCTCTCGTTCATGGAAACACAAACAGACG--TTTCTCTGTTCCAACTTCAAGGTTAAGTACTGCGCTGCC-AGGTGCCA------GCTGTCAACTTCTCTGCAT-CTCCCTGTTCCCCTGGTAGAGGCTTAGACCCCAAACAAATAGGGGTGCCCTGATGAATGCCCATGG--------------------------------------------------------------------------------------TGAGGACTGCTA---AGGACTCCGGATGAGAGAGGGAATCATCCCCAGAGCATGGCATAGCACAGAGGAGATGAGCA-GGGAAAAAGC-CAAACAGGACCACCAGCATCTTGCCAT-AGTTTTTGAGGATTTTAGAAGCAGCCTACAAATTA--AAATGTATCTGCAAATGTTCATCCCTGGCCCTGAGCTATCTGATTGGAAAGGG-AAAGCAGTTGGCTTTACGGGGCATGGACAATCTGCCA-GTACTTGCCGTAGGCTGACCTACTGAAATTCATCACAATCCCTAAGGGAATGGCTTGACCATCATCCC-CTTCCAG-----AGAAGCAGCCTGAGACTGGACAC--AAGAGCTGCAGC------CTCAAGGCC-----------------------------ATCCA----------GCTGGCCCCTGGCCCTTTCTGTCACCCTCTCTGTCCCCCAAGGAGCCCTGGCTATGGCAT--GTGACA----------- i canFam3.chr9 C 0 C 0 a score=2552.000000 s hg38.chr17_GL383563v3_alt 310928 1 + 375691 C s panTro4.chr17 286648 1 + 82630442 C i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 283022 1 - 81552678 C i nomLeu3.chr19 I 815 C 0 s rheMac3.chr16 200912 1 + 80904711 c i rheMac3.chr16 C 0 C 0 s macFas5.chr16 212899 1 + 80997621 c i macFas5.chr16 C 0 C 0 s papAnu2.chr16 195645 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195181 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002143 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15754763 1 - 61074082 T i canFam3.chr9 C 0 C 0 e mm10.chr11 75926587 3 + 122082543 I e ponAbe2.chr17 167104 1477 + 73212453 I a score=489820.000000 s hg38.chr17_GL383563v3_alt 310929 192 + 375691 CTAA---CGAAAGCAATGAGCC--GGGTATTCTCCGAGCACCTGCCACACACCCAGCAGCGGGGAGCAC---------AGAGTTCCCAGAAACTGTAAGTCGCGCAGTAA--TTGGCCAAACGGGAGTTCTGAGAAGAACTGGGCCGGGGCAGCCTGAAGGGGATTGCAGAGGAGACGGGCTGGCT---GTTTCCCGGAGCAGGCAGGGGC s panTro4.chr17 286649 192 + 82630442 GTAA---CGAAAGCAATGACCC--GGGTATTCTCCGAGCAACTGCCACACACCCAGCAGTGGGGAGCAC---------AGAGTTCCCAGAAACTGTGAGTCGCGCCGTAA--TTGGCCAAACGGGAGTTCTGAGAAGAACTGGGCCGGGGCAGCCTGAAGGGGATTGCAGAGGAGACGGGCTGGCT---GTTTCCCGGAGCAGGCAGGGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 168581 194 + 73212453 CTAA---TGAAAGCAATAAGCC--GGGTATTCTCCGAGCACCTGCCATGCACCCAGCAGTGCGGAGCAC---------GGAGTTCCTGGAAACTGTGAGTCACGCAGTAATTTTGGCCAAACAGGAGTTCTGAGAAGAACTGGGCCAGGACAGCCTGAAGGGGATTGCAGAGGAGACAGGTTGGCT---GTTTCCCGGAGCAGGCAGGGGC i ponAbe2.chr17 I 1477 C 0 s nomLeu3.chr19 283023 192 - 81552678 CCAA---CAAAAGCAGAAAGCC--GGGTATTCTCCAAGCACCTGCCATGCACCCAGCAGCGGGGAGCAC---------GGAGTTCCCAGAAACTG--AGTCGCGCAGTAATTTTGGCCAAACAGGAGTTCGGAGAAGAACTGGGCCGGGGCAGCCTGAAGGGGACTGCAGAGGAGACGGGCTGGCT---GTTTCCCGGAGCAGGCAGGGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 200913 190 + 80904711 ccaa---cgaaagcaatacgcca-gggtattctccgagcacctgccctgcacccagcagctgggagcaa---------ggagttcccagaaactg--agttgtgcagtaa--ttggccaaagaggagttctgagaagaaCTGGGCCGGGGCAGCCTGAAGGGGACGGCAGAGGAGATGGGCTGGAT---GTTCCCCGGGGCAGGC-GGGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 212900 190 + 80997621 ccaa---cgaaagcaatacgcca-gggtattctccgagcacctgccctgcacccagcagctgggagcaa---------ggagttcccagaaactg--agttgtgcagtaa--ttggccaaagaggagctctgagaagaaCTGGGCCGGGGCAGCCTGAAGGGGACGGCAGAGGAGATGGGCTGGAT---GTTCCCCGGGGCAGGC-GGGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 195646 184 + 74645514 CCAA---CGAAAGCAATATGCCG-GGGTATTATCCGAGCACCTGCCCTGCACCCAGCAGCTGGGAGCAA---------GGAGTTCCCAGAAACTA--AGTTGTGCAGTAA--TTGGCCAAA---CAGTTCTG---AGAACTGGGCCGGGGCAGCCTGAAGGGGACGGCAGAGGAGATGGGCTGGCT---GTTCCCTGGGGCAGGC-GGGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195182 183 + 75148670 CCAA---------CAATAAGCCA-GGGTATTCTCCGAGCACCTGCCCTGCACCCAGCAGCTGGGAGCAA---------GGAGTTCCCAGAAACTG--AGCTGTGCAGTAA--TTGGCCAAACAGGAGTTCTGAGAAGAACTGGGCCAGGGCAGCCTG-AGGGGACTGCAGAGGACATAGGCTGGCT---GTTCCCTGGAGCAGGC-GGGGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002144 198 - 1291538 CTAA---TGACAGCAACAAGCCAGGGGTATTCTCCAAGCACCTGCCATGCACCCAGCAGCCGGGAACACAGCATCCAAGGAGTTCCCAGAAACTG--AGTCGTGCAGTGA--TTGGCCACACAGGAGTTCTGATAAGAACTGGGCCGGGGCAGCCTGTAAGGTGTTGCAGAGGAGACCGGCAGGA------TTCTGAGAGCAGGCAGGAGC i calJac3.chrUn_GL286409 C 0 I 221 s mm10.chr11 75926590 164 + 122082543 -TAAACCTGAGAGCTAGGAGGG--AGGGGCTTGACAAACACCGGCCAAACGCTCTGCCA-------------------GGGGTGCTCAGAACACA--AGTGGGGCAGGAA--GTGGCCAAA---------------------GGCCAGGGCAGACTGAAGGATGTTACTGAGGAGGTAGGCAGTCTCAACTTGCAAGTGGCTGAGAGGAGC i mm10.chr11 I 3 C 0 s canFam3.chr9 15754764 152 - 61074082 CTTA---TGAAAACAACAGACC------------CAACCATCTTCTGTGTTCCCAGCACAAGGGAGTATGCCA-----GGAGTTCAAAGAAACTG--AGACATGGAGAAA--CTGGCCAAA---CAGTTCTGAAAAG-----GCTCAGGGTTACCTG--GGTCATAGCAG----CACTTGCAGGCT---GCTC------------------ i canFam3.chr9 C 0 C 0 a score=7729.000000 s hg38.chr17_GL383563v3_alt 311121 3 + 375691 TGG s panTro4.chr17 286841 3 + 82630442 CGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 168775 3 + 73212453 TGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 283215 3 - 81552678 TGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 201103 3 + 80904711 TGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213090 3 + 80997621 TGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 195830 3 + 74645514 TGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195365 3 + 75148670 TGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75926754 3 + 122082543 CAG i mm10.chr11 C 0 I 3 e canFam3.chr9 15754916 0 - 61074082 C e calJac3.chrUn_GL286409 1002342 221 - 1291538 I a score=1155307.000000 s hg38.chr17_GL383563v3_alt 311124 393 + 375691 GA--------------CCTGTGGGACCTCAGTCACCAGCCCTCAGTGCCACTGTTGTCCCAGCCTA-GGCCCTCAGAGC--AGAGGCACAAAGGAGCTGGTGTCTGAGCCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCCACCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGACCTCCTCAGTCACCCCATAGTCCTAAGGGGTCCCCCTGGCTCCAGGCTCCCCAGCTCAGACCCGGCCAATCCTGCCATCAGACAGGCTCTCCAAAGGCCCCGCTCCA--CCCAAACACCTCAAAATCAAGCCCAGGGTCCTCAGCTGGGAGTTCATGGCCATCCACAGACTCCACCGTGCCTTGCCAAATTTGTCTCCAGACAAAC--ACACACCTGGTGTCATACCTCATGCCCA s panTro4.chr17 286844 392 + 82630442 GA--------------CCTGTGGGACCTCAGTCACCAGCCCCCAGTGCCACTGTTGT-CCACCCTA-GGCCCTCAGAGC--AGAGGCAAAAAGGAGCTGGTGTCTGAGCCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCCACCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGACCTCCTCAGTCACCCCATAGTCCTAAGGGGTCCCCCTGGCTCCAGGCTCCCCAGCTCAGACCCGGCCAATCCTGCCATCAGACAGGCTCTCCAAAGGCCCCGTTCCA--CCCAGACACCTCAAAATCAAGCCCAGGGTCCTCAGCTGGGAGTTCATGGCCATCCACAGACTCCACCCTGCCTTGCCAAATTTGTCTCCAGACAAAC--ACACACCTGGTGTCATACCTCATGCCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 168778 396 + 73212453 GATGAGAGATGCAAGGCCTGTGGGACCTCAGTCACCAGCCCCCAGTGCCACTATTGTCCCACCCTA-GGCCCTCAGAGC--AGAGGCACAAAGGAGCTGATGTCTGAGCCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCCACCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGACCTCCTCAGTCACCCCATAGTCCTAAGGGGTCCCCCTGGCTCCAGACTCCCAAGCTCAGACCCGACCAATCCTGCCATCAGACAGGCTCTCCAAAGGCCCCACTCCA--TCCAGACACCTCAAAATCAAGCCCAGGGTCCTCACCCGGGAGTTCATGGCCATCCATAGACTCCACCCTGCCTTGCCAAGTTTGTCT-------------CACACCTGGCATCATCCCTCAGGCCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 283218 360 - 81552678 GATGTAAGGTGCGACGCCTGTGGGACCTCAGTCACCAGCCCCCAGTGCCACTGTTGTCCCACCCTA-GGCCCTCAGAGC--AGAGGCACAAAGGAGCTGGTGTCTGAGCCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCCACCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGACCTCCTCAGTCAC-----------------------------------------------CCCGGCCAATCCTGCCATCAGACAGGCTCTCCAAAGGCCCTGCTCCA--CCCAGACACCTCAAAATCAAGCCCAGCGTCCTCGCCCGGGAGTTCATGGCCATCCACAGACTCCACCCTGCCTTGCCAAATTTGTCTCCAGACAAAC--ACACACCTGGTGTCATCCCTCATGCCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 201106 401 + 80904711 GATGAGAGGTGCGAGGCCTGTGGGACCTCGGTCAGCAGCCTCCAGCGCCGCTGTTATCCCACCCTA-GGCCCTCAGAGCAGAGAGGCACAAAGGAGCTGGTGTGGGAGGCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCCACCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGA---CCTCAGTCACCCCACAGTCCTAAGGGGTACCC-CGGCTCCAGGCTCCCCAACTCAGACCCGCCCAATCCTGCCATCAGACAGGCTCTCCAAAGGCCCTGCTCCA--CCCAGACACCTCAAAATCAAGCCCAGGGTCCTCATCCGGGAGTTCACGGCCATCCACAGGCTCCACCCTGCCGTGCCATATTTGTCTC----CAAAC--AAACACCAGGCATCATTCCTTATGCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213093 401 + 80997621 GATGAGAGGTGCGAGGCCTGTGGGACCTCGGTCAGCAGCCTCCAGCGCCGCTGTTATCCCACCCTA-GGCCCTCAGAGCAGAGAGGCACAAAGGAGCTGGTGTGGGAGGCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCCACCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGA---CCTCAGTCACCCCACAGTCCTAAGGGGTACCC-CGGCTCCAGGCTCCCCAGCTCAGACCTGCCCAATCCTGCCATCAGACAGGCTCTCCAAAGGCCCTGCTCCA--CCCAGACACCTCAAAATCAAGCCCAGGGTCCTCATCCGGGAGTTCACGGCCATCCACAGGCTCCACCCTGCCGTGCCATATTTGTCTC----CAAAC--AAACACCAGGCATCATTCCTTATGCCCA i macFas5.chr16 C 0 I 19 s papAnu2.chr16 195833 402 + 74645514 GATGAGAGGTGCGAGGCCTGTGGGACCTCGGTCAGCAGCCTCCAGCACCGCTGTTATCCCACCCTT-GGCCCTCAGAGCAGAGAGGCACAAAGGAGCTGGTGTGAGAGGCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCCAGCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGA---CCTCAGTCACCCCACAGTCCTAAGGGGTCCCCTTGGCTCCAGGCTCCCCAGCTCAGACCCGCCCAATCTTGCCATCAGACAGGCCCTCCAAAGGCCCTGCTCCA--CCCAGACACCTCAAAATCAAGCCCAGGGTCCTCATCCGGGAGTTCACGGCCATCCACAGGCTCCACCCTGCCATGCCAAATTTGTATC----CAAAC--AAACACCTGGCATCATTCCTTATGCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195368 409 + 75148670 GATGAGAGGTTCCAGGCCTGTGGGACCTCTGTCAGCAGCCTCCAGCACCACTGTTATCCCACCCTA-GGCCCTCAGAGCAGAGAGGCACAAAGGAGCTGGTGTGGGAGGCCTGGGGCATTTTCAAAGACAGCCCCTGCTCCCTACCAGACCCACTGCCTGAACCAGGT-G-TCACCCAGACCTCCTCAGTCACCCCACAATCCTAAGGGGACCCCCTGGCTCCAGGCTCCCCAGCTCAGACCCGCCCAATCCTGCCATCAGACAGGCCCTCCAAAGGCCCTGCTCTA--CCCAGACACCTCAAAATCAAGCCCAGGGTCCTCATCCGGGAGTTCACGGCCATCCACAGGCTCCACCCTGCCTTGCCAAATTTGTGTCCAGACAAAC--AAACACCTGGCATCATTCCTCATGCCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002563 392 - 1291538 --------------GGCCTGTGAGGCCTCGGTCACCAGCCTCCAGTGCCCCTTTGGCCCCTCCCTA-GGCCTGCAGAGCACAGAGGCACAAAGGAACTGCTGTCTGAGGCCTGGGGCATTCCCAAAGACAG-CCCTGCTGCCCACCATACCCACCGGCCGAACCAGGGAA-TCGCCCAGACCTCC-CAGTCACCCCACAGCCCTAAGGTGTCCCCCTGGCTCCAGGCTCCCCAGCTCAGACCCCGCCAATGCTGATACCAGACAGACACTCCAAAGGCCCCGTTCCG--CCCAGACACCTCCAAATCAAGCCCAGGGTCTCCACCTGGGAGTTGATGGCAAACTGCAGGCTCTGCGTTGCCTTCCAAAATCTGTCTTCAAACAAA----AACACTTGGCATCATAGCTTGTGCCCA i calJac3.chrUn_GL286409 I 221 C 0 s mm10.chr11 75926760 274 + 122082543 -----CACCAGTCAGGCAGCAGGGACCTTTGCGAGCTTGCTACAATGCTGTAGCTGTCCC-TCTTG-GGCCC---------AGAAATAA------------GTCTGAGC----------------AGACTACCGCTTCT-----------------------CTAGAC-G-T--------------CGGTCAACCAATTATCCT-----------------------------------------------TTGCTGCCAG------CCTCTGGAGGGCCTCCCCTATGCTCAGACAGTTTAGGATCAAGCCCAGTGTCCTCATCTGGGAGTTCACAGCCATCCCTAAGCCCCGCCCCCCCT--CTGTGCCTATCTCTACACAGG----AACAGCTGGCATCATGCCCTGTGCCCC i mm10.chr11 I 3 C 0 s canFam3.chr9 15754916 332 - 61074082 ------------------------------------------------------TGGCCCAGTCTATGGCCCACAGAGCAGTGTGGCACAAA---------GTCACAGGTCTGTGACA-------------CCCCTGCTCCTCACCATTCCCACTGCCTAGCCCAGGA-GCTCACCCAGA---CACCAATCACCCTCTGATCCTAAGTGGTTCACCTG--TCCAGGCTCCCCCGCCCAGATGTAACCTACCCTGCCACCAGATGGGCCCGACAAAGGCCAGGCTCTA--CTCAGACACTTCCAAATCAAGCCCAACATCTTCACCTAGAAGTTCATGGCCATCCACAGGCTCTACTCTACCTTGCCAAATTTGTCTCCAGACACACAGAAACACTTGGCATCATCCCCTGTGTCTA i canFam3.chr9 C 0 C 0 a score=19554.000000 s hg38.chr17_GL383563v3_alt 311517 18 + 375691 GGCCCAGGCCTCCCCACA-- s panTro4.chr17 287236 11 + 82630442 GGCc-------tcccaca-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 169174 18 + 73212453 GGCCCAGGCCTCCCCACA-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 283578 18 - 81552678 GGCCCAGGCCTCCCCACA-- i nomLeu3.chr19 C 0 I 1 s rheMac3.chr16 201507 18 + 80904711 GACTCAGGTCTCCCCACA-- i rheMac3.chr16 C 0 I 1 s papAnu2.chr16 196235 11 + 74645514 ------GGCCTctcc-ca-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195777 18 + 75148670 GGCCCAGGTCTCCCCACA-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002955 18 - 1291538 GACACAGGCGCCCCCATA-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75927034 18 + 122082543 AGACGGTGCCTCCCACTA-- i mm10.chr11 C 0 I 1 s canFam3.chr9 15755248 19 - 61074082 AGCCCACTCCTCCTC-CAGG i canFam3.chr9 C 0 C 0 e macFas5.chr16 213494 19 + 80997621 I a score=48604.000000 s hg38.chr17_GL383563v3_alt 311535 17 + 375691 TCCACACTCACTGCCCC s panTro4.chr17 287247 17 + 82630442 tccacactcactgcccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 169192 17 + 73212453 TCCACACTCACTGCCCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 201526 17 + 80904711 TCCATACTCACTGCCCC i rheMac3.chr16 I 1 C 0 s macFas5.chr16 213513 17 + 80997621 TCCATACTCACTGCCCC i macFas5.chr16 I 19 C 0 s papAnu2.chr16 196246 17 + 74645514 tccacactcactgttcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195795 17 + 75148670 TCCACACTCAGTGTCCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002973 17 - 1291538 TTCACACTCACAACCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75927053 17 + 122082543 CCCACACTCACTGCctc i mm10.chr11 I 1 I 531 s canFam3.chr9 15755267 16 - 61074082 CTCTCTCTCGCTGCCC- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 283596 1 - 81552678 I a score=-6565.000000 s hg38.chr17_GL383563v3_alt 311552 2 + 375691 GG s panTro4.chr17 287264 2 + 82630442 cc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 169209 2 + 73212453 CC i ponAbe2.chr17 C 0 T 41 s rheMac3.chr16 201543 1 + 80904711 C- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213530 1 + 80997621 C- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196263 1 + 74645514 c- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195812 1 + 75148670 C- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002990 1 - 1291538 A- i calJac3.chrUn_GL286409 C 0 I 1 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755283 0 - 61074082 C e nomLeu3.chr19 283596 1 - 81552678 I a score=22596.000000 s hg38.chr17_GL383563v3_alt 311554 14 + 375691 GCTCAGGCCTCCCC s panTro4.chr17 287266 14 + 82630442 acccaggcctcccc i panTro4.chr17 C 0 C 0 s rheMac3.chr16 201544 14 + 80904711 ACCCAGGCCTcccc i rheMac3.chr16 C 0 I 1 s macFas5.chr16 213531 14 + 80997621 ACCCAGGCCTCCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196264 14 + 74645514 acccaggcctcccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195813 14 + 75148670 ACCCAGACCTCTCC i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 1002992 14 - 1291538 ACCCCGACCTCCCC i calJac3.chrUn_GL286409 I 1 C 0 s canFam3.chr9 15755283 5 - 61074082 -------CCTCC-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169211 41 + 73212453 T a score=273.000000 s hg38.chr17_GL383563v3_alt 311568 1 + 375691 A s panTro4.chr17 287280 1 + 82630442 a i panTro4.chr17 C 0 C 0 s calJac3.chrUn_GL286409 1003006 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755288 0 - 61074082 C e chlSab2.chr16 195827 1 + 75148670 I e papAnu2.chr16 196278 0 + 74645514 C e rheMac3.chr16 201558 1 + 80904711 I e macFas5.chr16 213545 0 + 80997621 C e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169211 41 + 73212453 T a score=30155.000000 s hg38.chr17_GL383563v3_alt 311569 16 + 375691 CATCCACACTCACTGC s panTro4.chr17 287281 16 + 82630442 catccacactcactac i panTro4.chr17 C 0 C 0 s rheMac3.chr16 201559 16 + 80904711 catccacactcactgt i rheMac3.chr16 I 1 C 0 s macFas5.chr16 213545 16 + 80997621 CATCCACGCTCACTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196278 16 + 74645514 catccacactcactgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195828 16 + 75148670 CATCCTCACTCACTGT i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 1003007 16 - 1291538 AATCGACACTCACTAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15755288 14 - 61074082 --TCCATACCCACTAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169211 41 + 73212453 T a score=21425.000000 s hg38.chr17_GL383563v3_alt 311585 20 + 375691 CCCGGGCTCAGG----------CCTCCCCA- s panTro4.chr17 287297 20 + 82630442 cccccacccagg----------cctcccca- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 169170 20 + 73212453 CCCAGGCCCAGG----------CCTCCCCA- i ponAbe2.chr17 T 41 C 0 s rheMac3.chr16 201575 19 + 80904711 -ccccacccaga----------cctccccc- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213561 20 + 80997621 CCCCCACCCAGA----------CCTCCCCC- i macFas5.chr16 C 0 T 36 s papAnu2.chr16 196294 19 + 74645514 -ccccacccaga----------cctccaaa- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195844 19 + 75148670 -CCCCACCCAGA----------CCACCCCA- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15755302 30 - 61074082 -CCCAGCCTGAAGCAACTACTCCCTCCTTGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003023 0 - 1291538 C e nomLeu3.chr19 283596 1 - 81552678 I a score=37197.000000 s hg38.chr17_GL383563v3_alt 311605 27 + 375691 ------CATCCACACTCACTGC---CCCCCACCCAG s panTro4.chr17 287317 27 + 82630442 ------catccacactcactgc---cccccacccag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 169190 27 + 73212453 ------CATCCACACTCACTGC---CCCCCGCCCAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 201594 26 + 80904711 ------catcctcactcactgt----ccccacccag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213545 27 + 80997621 ------CATCCACGCTCACTGT---CCCCCACCCAG i macFas5.chr16 T 36 C 0 s papAnu2.chr16 196313 26 + 74645514 ------catccacactcactgc----ccccacccag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195863 23 + 75148670 ------CATCCACACTCAC-------CCCCACCCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003023 5 - 1291538 -------------------------------CCCAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15755332 36 - 61074082 CATCTTCATAAACACTTACTTTTTACCCCTTCCCAG i canFam3.chr9 C 0 I 7 e mm10.chr11 75927070 531 + 122082543 I e nomLeu3.chr19 283596 1 - 81552678 I a score=39672.000000 s hg38.chr17_GL383563v3_alt 311632 24 + 375691 GCCTCCCCACATCCACACTCACTG s panTro4.chr17 287344 24 + 82630442 gcctcgccacatccacactcactg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 169217 24 + 73212453 GCCTCCCCACATCCACACTTACTG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 201620 24 + 80904711 gcctccccatatcctcactcactg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213572 24 + 80997621 ACCTCCCCCCATCCACACTCACTG i macFas5.chr16 C 0 I 35 s papAnu2.chr16 196339 23 + 74645514 gcctcccc-catccacactcactg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195886 22 + 75148670 CCCTCCCCACATCTACACTCAC-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003028 23 - 1291538 ACGTc-ccacatccacactcacaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e nomLeu3.chr19 283596 1 - 81552678 I a score=7000.000000 s hg38.chr17_GL383563v3_alt 311656 9 + 375691 CCCCGGGCT s panTro4.chr17 287368 9 + 82630442 tcccccacc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 169241 9 + 73212453 CCCGGGGCT i ponAbe2.chr17 C 0 T 80 s rheMac3.chr16 201644 8 + 80904711 -cccccacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213631 8 + 80997621 -TCCCCACC i macFas5.chr16 I 35 C 0 s papAnu2.chr16 196362 8 + 74645514 -cccccacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195908 7 + 75148670 --CCCCACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003051 9 - 1291538 ccccagact i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e nomLeu3.chr19 283596 1 - 81552678 I a score=37270.000000 s hg38.chr17_GL383563v3_alt 311665 31 + 375691 CAGGCCT-CCCCACATCCACACTCACTGC-CCC- s panTro4.chr17 287377 31 + 82630442 caggcct-ccccacatccacactcactac-ccc- i panTro4.chr17 C 0 I 2749 s rheMac3.chr16 201652 30 + 80904711 caggcct-ccccacatcctcactcactgt-cc-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213639 31 + 80997621 CAGACCTCCCCCCCATCCTCACTCACTGT-CC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196370 31 + 74645514 cagacct-ccccacatcctcactcactgtccc-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195915 30 + 75148670 CAGCCCT-CCCCACATCCTCACTCACTGT-CC-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003060 31 - 1291538 cagacgt-ccccacatccacactcacaac-cc-c i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169250 80 + 73212453 T a score=9417.000000 s hg38.chr17_GL383563v3_alt 311696 11 + 375691 GGGCTCAGGCC s rheMac3.chr16 201682 11 + 80904711 ccacccaggcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213670 11 + 80997621 CCACCCAGACC i macFas5.chr16 C 0 T 85 s papAnu2.chr16 196401 11 + 74645514 ccacccaggcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195945 11 + 75148670 CCACCCAGACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003091 11 - 1291538 agatccagacc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169250 80 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=7089.000000 s hg38.chr17_GL383563v3_alt 311707 7 + 375691 TCCCCAC s rheMac3.chr16 201693 7 + 80904711 tcccccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213596 7 + 80997621 TCCCCAC i macFas5.chr16 T 85 T 109 s papAnu2.chr16 196412 7 + 74645514 tccccac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195956 7 + 75148670 ACCCCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003102 6 - 1291538 -tcccac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169250 80 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=4953.000000 s hg38.chr17_GL383563v3_alt 311714 11 + 375691 ATCCACACTCA s rheMac3.chr16 201700 11 + 80904711 atcctcactcc i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 196419 7 + 74645514 atcctca---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 195963 11 + 75148670 ATCCACACTCA i chlSab2.chr16 C 0 T 8293 s calJac3.chrUn_GL286409 1003108 11 - 1291538 atccacactca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e macFas5.chr16 213603 109 + 80997621 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169250 80 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=918.000000 s hg38.chr17_GL383563v3_alt 311725 4 + 375691 CTGC s rheMac3.chr16 201711 4 + 80904711 ctgt i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 196426 4 + 74645514 ctgc i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003119 4 - 1291538 caac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e chlSab2.chr16 195974 8293 + 75148670 T e macFas5.chr16 213603 109 + 80997621 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169250 80 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=449.000000 s hg38.chr17_GL383563v3_alt 311729 4 + 375691 CCCG s ponAbe2.chr17 169170 4 + 73212453 CCCA i ponAbe2.chr17 T 80 C 0 s rheMac3.chr16 201715 3 + 80904711 ccc- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 196430 3 + 74645514 ccc- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003123 4 - 1291538 ccca i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e chlSab2.chr16 195974 8293 + 75148670 T e macFas5.chr16 213603 109 + 80997621 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=44296.000000 s hg38.chr17_GL383563v3_alt 311733 47 + 375691 GGCTCAGGCCTCCCCACA-TCCACACTCACTGCCCCCCACCCAGGCCT s ponAbe2.chr17 169174 47 + 73212453 GGCCCAGGCCTCCCCACA-TCCACACTCACTGCCCCCCGCCCAGGCCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 201718 46 + 80904711 cacccagacctccccaca-tccacactcaCTG-TCCCCACACAGACCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213494 47 + 80997621 GGCTCAGGTCTCCCCACATTCCATACTCACTG-CCCCCACCCAGGCCT i macFas5.chr16 T 109 C 0 s papAnu2.chr16 196433 47 + 74645514 cacccagacctccccaca-tcctcactcactgtcccccacccaggcct i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003127 46 - 1291538 gacccagacct-cccaca-tccacactcacgaccccagacccagacct i calJac3.chrUn_GL286409 C 0 T 224 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=10603.000000 s hg38.chr17_GL383563v3_alt 311780 23 + 375691 CCCCACATCCACACTCACTGC-CC s ponAbe2.chr17 169221 23 + 73212453 CCCCACATCCACACTTACTGC-CC i ponAbe2.chr17 C 0 T 36 s rheMac3.chr16 201764 22 + 80904711 CCCCACATCCACACTCACTGT-C- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213541 22 + 80997621 CCCC-CATCCACGCTCACTGTCC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196480 22 + 74645514 ccaaacatcctcactcactgt-c- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003173 224 - 1291538 T e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=25653.000000 s hg38.chr17_GL383563v3_alt 311803 36 + 375691 CCCTCCCAGGCCTCCCCACATCCACACTCACTGCCC s ponAbe2.chr17 169208 36 + 73212453 CCCGCCCAGGCCTCCCCACATCCACACTTACTGCCC i ponAbe2.chr17 T 36 T 36 s rheMac3.chr16 201786 35 + 80904711 CCCACACAGACCTCCCCACATCCACACTCACTGTC- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213563 35 + 80997621 CCCACCCAGACCTCCCCCCATCCACACTCACTGTC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196502 35 + 74645514 cccacccaggcctccccacatcctcactcacTGTC- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003173 224 - 1291538 T e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=24757.000000 s hg38.chr17_GL383563v3_alt 311839 38 + 375691 CCCACCCAGGCCTCCCCACGTCCACACTCACTGCCCTG s ponAbe2.chr17 169208 38 + 73212453 CCCGCCCAGGCCTCCCCACATCCACACTTACTGCCCGG i ponAbe2.chr17 T 36 T 72 s rheMac3.chr16 201821 37 + 80904711 CCCACACAGACCTCCCCACATCCACACTCACTGTCCC- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213598 37 + 80997621 CCCACCCAGACCTCCCCCCATCCTCACTCACTGTCCC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196537 37 + 74645514 TCTACTCAGGCctccccccatccacactcactgtccc- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003173 224 - 1291538 T e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=49991.000000 s hg38.chr17_GL383563v3_alt 311877 69 + 375691 GGCCCAGGCCT-CCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACATCCACACTCACTGCC s ponAbe2.chr17 169174 69 + 73212453 GGCCCAGGCCT-CCCCACATCCACACTCACTGCCCCCCGCCCAGGCCTCCCCACATCCACACTTACTGCC i ponAbe2.chr17 T 72 T 67 s rheMac3.chr16 201858 68 + 80904711 CACACAGACCT-CCCCACATCCACACTCACTG-TCCCCACACAGACCTccccacatccacactcactgtc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213635 69 + 80997621 CACCCAGACCTCCCCCCCATCCTCACTCACTG-TCCCCACCCAGACCTCCAAACATCCACACTCACTGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196574 68 + 74645514 cacccaggcct-ccccacatcctcactcactg-tccccacccaggcctccccacatccacactcactgtc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003173 224 - 1291538 T e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=56112.000000 s hg38.chr17_GL383563v3_alt 311946 127 + 375691 TCCCACCCAGGCCTCCCCACATCCACACTCACTGCCTCCCACCCAGGCCTCCCCACGTCCACACTCACTGCCCCCCTCCCAGGCCTCCCCACATCCACACTCACTGCCTCCCACCCAGGCCTCCCCA s rheMac3.chr16 201926 123 + 80904711 -cccacacagacctccccacatccacactcactgtc-cccacacagacctccccacatccacactcactgtcccca-cccagacctccccccatcctcactcactgtc-cgcacccagacctcccca i rheMac3.chr16 C 0 I 2580 s macFas5.chr16 213704 123 + 80997621 -CCCACCCAGGCCTCCCCATATCCTCACTCACTGCC-CCCACCCAGGCCTCCCCACAGCCACACTCACTGTCCCCA-CACAGGCCTCCCCACATCCACACTCACTGTC-CCCACACAGACCTCCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196642 123 + 74645514 -cccacccaggcctccccacatccacactcgctgtc-cccacccaggcctccccacatcctcactcactgtcccca-cccagacctccccacatccacacTCGCtgtc-cccacccaggcctcccca i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003173 224 - 1291538 T e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169243 67 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=34636.000000 s hg38.chr17_GL383563v3_alt 312073 85 + 375691 CATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACGTCCACACTCACTGCCCCCCTCCCAGGCCTCCCCACATCCAATCTCAC s rheMac3.chr16 204629 83 + 80904711 catccacactcactg-tccccacccagacctccccacatcctcactcactg-tccccacccagacctccccacatcctcactcac i rheMac3.chr16 I 2580 C 0 s macFas5.chr16 213827 80 + 80997621 CATCCACACTCACTG-TCCCCACACAGGCCTCCCCACATCCACACTCAC----CCCCACCCAGACCTCCCCACATCCACACTCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196765 83 + 74645514 catcctcactcactg-tccccacccagacctccccacatcctcactcactg-tccccacccaggcctccaaacatcctcactcac i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003173 224 - 1291538 T e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169243 67 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=4399.000000 s hg38.chr17_GL383563v3_alt 312158 8 + 375691 TGCCCCGA s rheMac3.chr16 204712 8 + 80904711 tgtcccca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213907 8 + 80997621 TGTCCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196848 8 + 74645514 tgtcctca i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002949 8 - 1291538 TGCCCAGA i calJac3.chrUn_GL286409 T 224 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169243 67 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=68178.000000 s hg38.chr17_GL383563v3_alt 312166 65 + 375691 CCCAGGCCTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACATCCACACTCACTG s ponAbe2.chr17 169176 65 + 73212453 CCCAGGCCTCCCCACATCCACACTCACTGCCCCCCGCCCAGGCCTCCCCACATCCACACTTACTG i ponAbe2.chr17 T 67 T 65 s rheMac3.chr16 204720 64 + 80904711 cccagacctccccacatcctcactcactg-tccccacccagacctccccacatcctcactcactg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213915 64 + 80997621 CCCAGACCTCCCCACATCCTCACTCACTG-TCCCCACCCAGACCTCCCCACATCCTCACTCCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196856 64 + 74645514 cccaggcctccccacatcctcactcactg-tccccacccagacctccccacatcctcactcactg i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1002957 65 - 1291538 CACAGGCGCCCCCATATTCACACTCACAACCCCAGACCCCGACCTCCCCAAATCGACACTCACTA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=422.000000 s hg38.chr17_GL383563v3_alt 312231 1 + 375691 T s rheMac3.chr16 204784 1 + 80904711 t i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213979 1 + 80997621 T i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196920 1 + 74645514 t i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003022 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 I 150 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169241 65 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=2856.000000 s hg38.chr17_GL383563v3_alt 312232 6 + 375691 CCCCCA s rheMac3.chr16 204785 5 + 80904711 -cccca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213980 5 + 80997621 -CCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196921 5 + 74645514 -cccca i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003023 150 - 1291538 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169241 65 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=50995.000000 s hg38.chr17_GL383563v3_alt 312238 66 + 375691 CCCAGGCTTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACATCCACACTCACTGC s ponAbe2.chr17 169176 66 + 73212453 CCCAGGCCTCCCCACATCCACACTCACTGCCCCCCGCCCAGGCCTCCCCACATCCACACTTACTGC i ponAbe2.chr17 T 65 T 72 s rheMac3.chr16 204790 65 + 80904711 cccAGACCTCCCCACATCCTCACTCACTG-TCCCCACCCAGACCTCCCCACATCCTCACTCACTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 213985 65 + 80997621 CCCAGACCTCCAAACATCCTCACTCACTG-TCCCCACCCAGGCCTCCCCACATCCTCACTCACTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196926 65 + 74645514 cccaggcctccaaacatcctcactcactg-tccccacccaggcctccccacatcctcactcactgt i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003023 150 - 1291538 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=53267.000000 s hg38.chr17_GL383563v3_alt 312304 74 + 375691 CCCGGGCTCAGGCCTCCCCACATCCACACTCACTGCCCCCCACCCAGGCCTCCCCACATCCACACTCACTGCCC s ponAbe2.chr17 169170 74 + 73212453 CCCAGGCCCAGGCCTCCCCACATCCACACTCACTGCCCCCCGCCCAGGCCTCCCCACATCCACACTTACTGCCC i ponAbe2.chr17 T 72 T 68 s rheMac3.chr16 204855 72 + 80904711 -CCCCACCCAGACCTCcccacatcctcactcactg-cccccacccagacctccccacatccacactcactgtcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214050 72 + 80997621 -CCCCACCCAGACCTCCCCACATCCTCACTCCCTG-TCCCCACCCAGACCTCCCCCCATCCTCACTCACTGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 196991 72 + 74645514 -ccccacccagacctccccacatcctcactcactg-tccccacccaggcctccaaacatcctcactcactgtcc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003023 150 - 1291538 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=1104.000000 s hg38.chr17_GL383563v3_alt 312378 3 + 375691 CCT s rheMac3.chr16 204927 3 + 80904711 cca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214122 3 + 80997621 CCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 197063 3 + 74645514 cca i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003023 150 - 1291538 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169244 68 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=9296.000000 s hg38.chr17_GL383563v3_alt 312381 10 + 375691 CCCAGGCCTC s ponAbe2.chr17 169176 10 + 73212453 CCCAGGCCTC i ponAbe2.chr17 T 68 C 0 s rheMac3.chr16 204930 10 + 80904711 cccagacctc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214125 10 + 80997621 CCCAGGCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 197066 10 + 74645514 cccaggcctc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003023 150 - 1291538 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=38197.000000 s hg38.chr17_GL383563v3_alt 312391 38 + 375691 CCCACATCCACACTCACTG-CCCCCCACCCA------GGCCTCCC s ponAbe2.chr17 169186 38 + 73212453 CCCACATCCACACTCACTG-CCCCCCGCCCA------GGCCTCCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 204940 37 + 80904711 cccacatcctcactcactg--tccccaccca------ggcctccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214135 37 + 80997621 CCCACATCCTCACTCACTG--TCCCCACACA------GGCCTCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 197076 37 + 74645514 cccacatcctcactcactg--tccccaccca------gacctccc i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003173 45 - 1291538 cccatatccacactcactacctccatacccacctcATGGCCTCCC i calJac3.chrUn_GL286409 I 150 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=14659.000000 s hg38.chr17_GL383563v3_alt 312429 18 + 375691 CACATCCACACTCACTGC s ponAbe2.chr17 169224 18 + 73212453 CACATCCACACTTACTGC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 204977 18 + 80904711 cacatcctcactcactgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214172 18 + 80997621 CACATCCACACTCACTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 197113 18 + 74645514 cacatcctcactcactgt i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 195974 8293 + 75148670 T e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=3000.000000 s hg38.chr17_GL383563v3_alt 312447 2 + 375691 CC s ponAbe2.chr17 169242 2 + 73212453 CC i ponAbe2.chr17 C 0 T 33 s rheMac3.chr16 204995 2 + 80904711 cc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214190 2 + 80997621 CC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 197131 2 + 74645514 cc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 187681 2 + 75148670 cc i chlSab2.chr16 T 8293 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=56653.000000 s hg38.chr17_GL383563v3_alt 312449 67 + 375691 CCTCCCAGGCCTCCCCACATCCACACTCACTGCCCCTGCCCAGGTCTCCCCACATCCACACTCACTG s rheMac3.chr16 204997 67 + 80904711 ccacccaggcctccccacatcctcactcactgtccccacccagacctccccccatcctcactcACTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214192 67 + 80997621 CCACCCAGACCTCCCCACATCCTCACTCACTGTCCCCACCCAGACCTCCCCCCATCCTCACTCACTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 197133 67 + 74645514 ccacccaggcctccccacatcctcactcactgtccccacccaggcctccccacatccacactcactg i papAnu2.chr16 C 0 I 2117 s chlSab2.chr16 187683 67 + 75148670 ccacccagacctccccacatccacactcactgtccccacccagacctccccacatcctcactcactg i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169244 33 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=25672.000000 s hg38.chr17_GL383563v3_alt 312516 40 + 375691 CCCCCTCCCAGGCCTCCCCACATCCACACTCACTGCCCCT s rheMac3.chr16 205064 40 + 80904711 TCCCCACACAGGCCTCCCCACATCCACACTCACTGTCCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214259 40 + 80997621 TCCCCACCCAGACCTCCCCACATCCACACTCACTGTCCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 199317 40 + 74645514 cccccacccagacctccccacatcctcactcactgtcctc i papAnu2.chr16 I 2117 C 0 s chlSab2.chr16 187750 38 + 75148670 -tcccccaccggcct-ccaacatcggcactcactaccccc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 283596 1 - 81552678 I e ponAbe2.chr17 169244 33 + 73212453 T e panTro4.chr17 287408 2749 + 82630442 I a score=21997.000000 s hg38.chr17_GL383563v3_alt 312556 17 + 375691 GCCCAGGTCTCCCCACA s ponAbe2.chr17 169211 17 + 73212453 GCCCAGGCCTCCCCACA i ponAbe2.chr17 T 33 C 0 s rheMac3.chr16 205104 17 + 80904711 ACCCAGACCTCCCCACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214299 17 + 80997621 ACCCAGACCTCCCCACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 199357 17 + 74645514 acccagacctccccacA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 187788 17 + 75148670 acccaggcctccccaca i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 283596 1 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=132909.000000 s hg38.chr17_GL383563v3_alt 312573 81 + 375691 TCCACACTTACTGCCCAGGGCTGAAGCAATCGCTGCCTCGTCCTCATAAGCACACTGTTTTTACCTCTTCCCAGAACTTCG s ponAbe2.chr17 169228 81 + 73212453 TCCACACTTACTGCCCGGGGCTGAAGCAATCGCTGCCTCATCCTCATAAGCACACTGTTTTTACCTCTTCCCAGAACTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 283597 81 - 81552678 TCCACACTCACTGCCCCGAGCTGAAGCAAGCACTGCCTCGTCCTCATAAGCACACCGTTTTTACCTCTTCCCAGAACTTCC i nomLeu3.chr19 I 1 C 0 s rheMac3.chr16 205121 81 + 80904711 TCCTCACTTACTGCCCCGGGCTAAAGCAAGCGCGGCCTCATCCTCAGAAGCACATTGTTTTTACCTCTTCCCAGAACTTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214316 81 + 80997621 TCCACACTCACTGCCCCGGGCTAAAGCAAGCGCGGCCTCGTCCTCAGAAGCACATTGTTTTTACCTCTTCCCAGAACTTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 199374 80 + 74645514 TCGGCACTCACTGCCCCGGGCTAAAGCAAGCGCTGCCTTGTCCTCAGAAGCACACTGTTTTTCCCTCTTCCCAGAAC-TCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 187805 80 + 75148670 tcctcactcacTGCCCCGGGCTAAAGCAAGCGCTGCCTCGTCCTCATAAGCACACTGTTTTTACCTCTTCCCAGAAC-TCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755368 7 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=612077.000000 s hg38.chr17_GL383563v3_alt 312654 325 + 375691 CAGTTTCTG-------GTGAACGTGTCTGACCTCTCCTACTGGACCAAACACTCCCTCAGAGCAGG--ATGCCTCCTGCCCATATGGTACTGAAAAC-TGTG---------------------------Gcactggaatagaactgagagcccagaaataaacccatacatccgtggtcaactgactttcaacaaggatgccgagaccatacgacggagaaagaacagtctttccaacaacatctgctgggacaagtgcagagccacctgcagaaggatgacg-tggaccctgacatcacaccattgcaaaat-ttaact-caaacggatcaaaacctaatgcaagagctaaaactatgaaattc s ponAbe2.chr17 169309 326 + 73212453 CAGTTTCTG-------GTGAACGTGTCTGACCTCTCCTACTGGACCAAACACTCCCTCAGAGCAGG--GTGCCTCCTGCCCAGATGGTAGTGAaaacatgtg---------------------------gcactagaatagaactgagaccccagaaataaacccatacatcagtggtcaactgactttcaacaaggctgccgagaccatacaatggggaaagaacagtcttttcaacaacatctgctgggacaagtggagggccacgtgcagaaggacgacg-tggaccctgacatcacatcattgcaaaat-ttaact-caaacagatcaaaacctaatgcaagagctaaaactatgaaattc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 283678 323 - 81552678 CAGTGTCTG-------GTGAACGTGTCTGACATCTCCTACT-GACCAAACACTCCCTGAGAACAGG--GTGCCTCCTGCCCAGATGGTAGTGAaaacatgtg---------------------------gcactggaatagaactgacagcccagaaataaacccatacatcagtggtcaactgacattcaacaagggtgccgagaccatacaacagggaaaga--agtcttttcaacaacatctgctggaacaagtagagagccacctgcagaaggatgacg-tggaccctgacatcacaccattgcaaaat-ttaact-caaacagatcaaaacctaatacaagggctaaaactatgaaattc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 205202 320 + 80904711 CAGTTTCTG-------GTGAATGTGTCTGACCTCTCCTACTGGACCGAACACTCCCGGAGAGCAGG--GTGCCTCCTGCCCAGAtggtactgacaacatgtg---------------------------gcactagaacaggactgagagcccggaaataaacccatacatccgtgttcaactgactttccacaagggtgctgagaccataccacggggaacgaacagtctttt---caacatctgctgggacaagag--gagccacgtgcagaaggatgacg-tggaccccgaggtcacaccattgtcaaat-ttaact-caaacagatc-aaacctaaaacaagagctaaaactatgaaattc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214397 320 + 80997621 CAGTTTCTG-------GTGAATGTGTCTGACCTCTCCTACTGGACCGAACACTCCCGGAGAGCAGG--GTGCCTCCTGCCCAGAtggtactgacaacatgtg---------------------------gcactagaacaggactgagagcccggaaataaacccatacatccgtgttcaactgactttccacaagggtgctgagaccataccacggggaacgaacagtctttt---caacatctgctgggacaagag--gagccacgtgcagaaggatgacg-tggaccccgaggtcacaccattgtcaaat-ttaact-caaacagatc-aaacctaaaacaagagctaaaactatgaaattc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 199454 320 + 74645514 CAGTTTCTG-------GTGAACGTGTCTGACCTCTCCTACTGGAGCAAACACTCCGGGAGAGCAGG--GTGCCTCCTGCCCAGACGGTACTGACAACATGTG---------------------------GCACTAGAACAGGACTGAGAGCCcggaaataaacccatacatccGTGCTCAACTGACTTTCCACAAGGGTGCTGAGACCATACCacggggaaagaacagtctttt---caacatcTGCTGGGACAAGAG--GAGCCACGTGCAGAAGGATGACG-TAGACCCCGAGGTCACACCATTGTCAAAT-TTAACT-CAAACAGATC-AAACCTAAAACAAGAGCTAAAACTATGAAATTC i papAnu2.chr16 C 0 I 288 s chlSab2.chr16 187885 319 + 75148670 CCGTTTCTG-------GCGAACGTGTCTGACCTCTCCTACTGGAGCGAACACTCCCGGAGAGCA-G--GTGCCTCCTGCCCAGACGGTACTGACAacatgtg---------------------------gcactagaacagaactgagagcccggaaataaacccatacatccgtgctcaactgactttccacgagggtgctgagaccataccacggggaaagaacagtctttt---caacatctgctgggacaagag--gagccacgtgcagaaggatgacg-tggaccctgaggtcacaccattgtcaaat-ttaact-caaacagatc-aaacctaaaacgagagctaaaactatgaaattc i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15755375 354 - 61074082 CAATTTCTGATGGCTTATGAATGTGTCTGACTTTTCCTATCAGACCAAAAGCTCCCTGGGAGTGAGACGAGACTCATGCCTGGACGATGCTCAAAACACGTGCAATGGAAAAAAAAAAAAAAAACACGTGcaatggaatagaattaagagtctaggaataaacccatacatctatgaccaactgattttagacaaaggtgtcaagaccattcaatggggaaagaagactcctttcaacaaatgctgctgtgacaacagggtagccatatgcagaagtatgaagttggacccttacctcacaccatttaaaaatagtaactccaaatggatt-----------gaagaactaacacttcaaaactc i canFam3.chr9 I 7 C 0 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=6334.000000 s hg38.chr17_GL383563v3_alt 312979 7 + 375691 gtataag-- s ponAbe2.chr17 169635 7 + 73212453 ttacaag-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284001 7 - 81552678 ttacaag-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 205522 7 + 80904711 ttgcaag-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214717 7 + 80997621 ttgcaag-- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 188204 7 + 75148670 ttgcaag-- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15755729 9 - 61074082 ttagaagag i canFam3.chr9 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 199774 288 + 74645514 I e panTro4.chr17 287408 2749 + 82630442 I a score=24933.000000 s hg38.chr17_GL383563v3_alt 312986 13 + 375691 gaatgtcagggta s ponAbe2.chr17 169642 13 + 73212453 gaatgtcagggta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284008 13 - 81552678 gaatgtcagggta i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 205529 13 + 80904711 gaatgttggggta i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214724 13 + 80997621 gaatgttggggta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200062 13 + 74645514 GAATGTCGGGATA i papAnu2.chr16 I 288 C 0 s chlSab2.chr16 188211 13 + 75148670 gaatgtcggggta i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15755738 13 - 61074082 ggacacctgggtg i canFam3.chr9 C 0 I 146 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=83396.000000 s hg38.chr17_GL383563v3_alt 312999 76 + 375691 aattttcatgacttcagatttggcagtgatttcttagaggacaccaaaaaataggtgtcatctacattttggtgtc s ponAbe2.chr17 169655 51 + 73212453 aattttcatgatttcagatttggcagtgatttcttagatgacacaacacaa------------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284021 76 - 81552678 aattttcatgacttcagatttggcagtgatttcttagatgacaccaaaaaataggtgtcatctatattttggtgtc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 205542 62 + 80904711 aattttcatgacttcagatttggcaatgatttcttag-------------ataggtatcatc-atgttttggagtc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214737 62 + 80997621 aattttcatgacttcagatttggcaatgatttcttag-------------ataGGTATCATC-ATGTTTTGGTGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200075 63 + 74645514 AATTTTCATGACTTccgatttggcaatgatttcttag-------------ataggTGTCATCTATGTTTTGGTGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 188224 63 + 75148670 aattttcatgacttcagatttggcaatgatttcttag-------------ataGGTGTCATCTATATTTTGGTGTC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755751 146 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=151081.000000 s hg38.chr17_GL383563v3_alt 313075 100 + 375691 atctaagatttggcaatgatttcttagatgacaccatacacaccaaaagaaaaaagagacaaatt----------ggattttttatcataatttttttgagac-ggggtaa s ponAbe2.chr17 169706 84 + 73212453 -------------caa-gatttcttagatga---catacacaacaagagaaaaaagagacaaatt----------ggactttttatcataatttttttgagacaggggtct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284097 97 - 81552678 atctaagatttggcaatgatttcatagatgacaccatacacaacaaaagaaaaaagagacaaatt----------ggactttttatcataatttttttgagacacgg---- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 205604 101 + 80904711 atctaagatttgcttatgatttcttagatgacaccatacatgacaaaagaaaaaagagaccaatt----------ggactttttatcataatttttttgagacaggggtct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214799 101 + 80997621 ATCTAAGATTTGCTTATGATTTCTTAGATGACACCATACATGACAAAAGAAAAAAGAGACCAATT----------GGACTTTTTATCATAAtttttttgagacaggggtct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200138 101 + 74645514 ATCTAAGATTTGCTTATGATTTCTTAGATGACACCAtacatgacaaaagaaaaaagagaccaaTT----------GGactttttatcataatttttttgagacaggggtct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 188287 101 + 75148670 ATCTAAGATTTGCTTATGATTTCTTAGATGACACCATATATGACAAAATAAAAAAGAGACAAATT----------GGAATTTTTATCATAAtttttttgagacaggggtct i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15755897 93 - 61074082 ataaaatattttaaaaaaatctcttag-----------------aagaaaatataggggcaaatcttttttttaaagattttgtttatttatttatttgagagagagaga- i canFam3.chr9 I 146 I 235 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=184102.000000 s hg38.chr17_GL383563v3_alt 313175 120 + 375691 tgccgtgctgtttaggttcatctcaaactcctgggctcaagttgtcctcccacctcggccccccagatagctgagatgacaggcatacaccactgtgcctggctgactttatcgtaattt s ponAbe2.chr17 169790 120 + 73212453 tgccgtgttgtttaggttcatctcaaactcctgggctcaagtggtcctcccacctcggccccccaggtagctgagatgacaggcatacaccactgtgcctggctgactttatcataattt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284194 119 - 81552678 -gctgtgttgtttaggttcatctcaaactcctgggctcaagtggtcctcccacctcagccccccaggtagctgagatgacaggcatacaccactgtgactggccgactttatcataattt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 205705 110 + 80904711 tgccatgttgtttaggttcatctcaagctcccgggctcaagtggtcctcccaccttgg-cccccaggttactgagatgacaggcatacaccacggtgcctggctgacgtta--------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 214900 110 + 80997621 tgccatgttgtttaggttcatctcaagctcccgggctcaagtggtcctcccaccttgg-cccccaggttgctgagatgacaggcatacaccacggtgcctggcTgacgtta--------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200239 110 + 74645514 tgccatgttgtttAGGTtcatctcaagctcctgggctcatgtggtcctcccacctcgg-cccccaggctgctgagatgacaggcatacACCATGGTGCCTGGCTGACGTTA--------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 188388 110 + 75148670 tgccatgttgtttagattcatctcaaactcctgtgctcaagtggtcctcccacctcgg-cccccaggttgctgagatgacaggcataccccacggtgcctggcTGACGTTA--------- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15755990 235 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=170666.000000 s hg38.chr17_GL383563v3_alt 313295 95 + 375691 gtaaatctg-------tcataatttacaacttt-gtccatcaaaggacactatcgagaaggtgaaaagacagcccatagaatgggagaagatatttgcaaacc s ponAbe2.chr17 169910 95 + 73212453 gtaaatttg-------tcataatttacaacttt-gtccatcaaaggacactatcgagaaggtgaaaagacagcccatagaatgggagaagatatttgcaaacc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284313 95 - 81552678 gtaaattta-------tcataatttacaacttt-gtccatcaaaggacactatcgagaaggtgaaaagacagcccatagaatgggagaagatatttgcaaacc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 205815 86 + 80904711 ----------------ccataatttccagcttt-atgcatcaacagatactatcaacaaggtgaaaagacggcccagagaacgggagaagatatttgcaaacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 215010 86 + 80997621 ----------------ccataatttccagcttt-gtgcatcaacagatactatcaacaaggtgaaaagacggcccagagaacgggagaagatatttgcaaacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200349 86 + 74645514 ----------------CCATCATTTCCAGCTTT-GTGCATCAACAGATACTATCAACAAGGTGAAAAGATGgcccagagaatgggagaagatatttgcaaacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 188498 86 + 75148670 ----------------CCATCATTTCCAGCttt-gtgcatcaacaggtactatcaacaaggtgaaaagacggcccacagaatgggagaagatatttgcaaact i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15756225 103 - 61074082 gaaaatttggccatcatcaacattaaaaacttcagtgcaccaaagggcactctcgagaaggtgaaaagataacccatagaatgggataaaatatttgcaaatc i canFam3.chr9 I 235 I 425 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=268110.000000 s hg38.chr17_GL383563v3_alt 313390 161 + 375691 atatatctcataagggtctagtatctacactat-------------------------------------------------------------------ataaataattctcacaactcaacaacaaaatgacaattccatttaaacatgggcaaaggatttg-aaaagacatttccccaaagaagatacgcaaatgcccaaaaatcacat-gaaaaaagactcaatat s ponAbe2.chr17 170005 161 + 73212453 atgtatctcataagggtctagtatctacactat-------------------------------------------------------------------ataaataactctcacaactcaacaacaaaatgacaattccatttaaacacgggcaaaggatttg-aaaagacatttccccaaagaagatacgcaaatgcccaaaaatcacat-gaaaaaagactcaacat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284408 159 - 81552678 acgtctctcataagggtctagtatctacactat-------------------------------------------------------------------ataaataactctcacaactcaacaacaaaatgacaattccgtttaaacacgggcaaaggatttg---aagacatttccccaaagaagatacgcaaatgcccaaaaatcacat-gaaaaaagactcaacat i nomLeu3.chr19 C 0 I 129 s rheMac3.chr16 205901 228 + 80904711 acgtatctgataagggtctagtatctagactataaataactctcacaactcaacaacgaaatgacaattccatttaaacacaggcaaaggatttgaaaagataaataactctcacaactcaacaacaaaatgacaattccatttaaacacgggcaaaggatttg-aaaaggtatttccccaaagaagatacgcaaatgcccaaaaatcacct-gaaaaaagactcaacat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 215096 159 + 80997621 acgtatctgataagggtctagtatctagact---------------------------------------------------------------------ataaataactctcacaactcaacaacaaaatgacaattccatttaaacacgggcaaaggatttg-aaaagatatttccccaaagaagatacgcaaatgcccaaaaatcacct-gaaaaaagactcaacat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200435 162 + 74645514 acgtatctgataagggtctagtatctagactat-------------------------------------------------------------------ataaataactctcacaactcaacaacaaaatgacaattCCATTTAAagatgggcaaaggatttgaaaaagacatttccccaaagaagatacGCAAATGCCCAAAAATCACCT-GGAAAAAGactcaacat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 188584 162 + 75148670 atgtgtctgataagggtctagtatctagactat-------------------------------------------------------------------ataaaaaactctcacaactcaacaacaaaatgacaattctatttaaacttgggcaaaggatttg-aaaagacatttccccaaagaagatacgcaaatgcccaaaaatcacctggaaaaaagactcaacat i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15756328 425 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e panTro4.chr17 287408 2749 + 82630442 I a score=235969.000000 s hg38.chr17_GL383563v3_alt 313551 187 + 375691 tgttaaccatcaggaaaatacaaatcaaaaccaccatgagataccacttcacatccactaggatggctacactaaaaaatatgaaaaataacaagtgttcgtgaggatgtggagaaactggaacacttgtgccttgttggtgggaatggagatggtgcagccactatggaagacagtt---tagttcctc s ponAbe2.chr17 170166 187 + 73212453 cattaaccatcaggaaaacacaaatcaaaaccaccgtgagataccacttcacatccactaggatggctatactaaaaaatatgaaaaataacaagtgttcgtgaggatgtggagaaactggaacacgtgtgccttgttggtgggaatggagatggtgcagccactatggaagacagtt---tagttcctc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 206129 189 + 80904711 cattaaccatcaggaaaatacaaatcaaaaccaccatgagataccacttcacatccactaggatggctatatgaaaaaatatgaaaaataacaagtgttcgcgaggatgtggaggaactgccacacttgtgccttgttggtgggaatggaaaatg-gaagccactatggaagacagttgggcagttcctc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 215255 189 + 80997621 cattaaccatcaggaaaatacaaaccaaaaccaccatgagataccacttcacatccactaggatggctatatgaaaaaatatgaaaaataacaagtgttcgcgaggatgtggaggaactgccacacttgtgccttgttggtgggaatggaaaatg-gaagccactatggaagacagttgggcagttcctc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200597 189 + 74645514 cattaaccatcaggaaaatacaaatcaaaaccaccatgagataccacttcacatccactaggatggctatacgaaaaaatatgaaaaataacaagtttttgcgaggatgtggaggaactggcacacttgtgccttgttggtgggaatggaaaatg-gaagcCACTATGGAAGACAGTTGGGCAGTTCCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 188746 189 + 75148670 cattaaccatcaggaaaatacaaatcaaaaccaccatgagataccacttcacatccactaggatggctacacgaaaaaatatgaaaaataacaagtgttcgtgaggatgtggaggaactggcacacttgtgccttgttggcgggaatggaaaatg-gaagccactatggaagacagttgggcagttcctc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15756328 425 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=665452.000000 s hg38.chr17_GL383563v3_alt 313738 442 + 375691 aacaagtt-aacacacaattatcatctgacccaacaatttcgctcccaggtatagacccaaaagaattgaaagcaagtgttcaaattaaaacctgtacaccaatgctcatagcagcaccattcacaatagccaaaggg----ggaaacaactcaaatgtccatcaactgggaaaaggacaaacaaaatatggtgtatccacacaaaaggatattatttggctataaaaaggaatgaagtatcgattcatgctacaacacagacaaaccttgaaaat---ctgttaaaagaagccagtcacaaaaaaccaca---tatatgatcccatttatgtaaaatgttcagaatagacaaatttatagagacagaaagtagattagtggttgcctagggcttgttggggtcagggaagggggacagcaaaagggaatagggtttctgtatgtggtgatga s ponAbe2.chr17 170353 444 + 73212453 aacaagtt-aacatagaattatcatctgacccaacaattccgctcccaggtatagacccaaaagaattgaaagcaagtgttcaaataaaaacctgtacaccgatgttcatagcagcaccattcacaatagccaaaggg----ggaaacaactcaaatctccatcaactggaaaaaggacaaacaaaatatggtgtatccatacaaagggatattatttggctacaaaaaggaatgaa-tatcgattcatgctacaacacagacaaaccttgaaaat---ctgctaaaagaagccagtcacaaaaagccacatattatatgattccatttatgtagaatgttcagaatagacaaatttatagagacagaaagtagatcagtggttgcctagggcttgttggggtcggggaagggggacagcaaaagggaacagggtttctgtatgtggtgatga i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 206318 443 + 80904711 cacaagtt-aacacagaattatcatctgactcaacaattccgctcccaggcatagacccaaaagaattgaaagcagatgttcaaataaaaacctgtacaccagtgttcacagcagcaccattcacaatagccaaaacg----ggaaacaacacaaatgtccatcaactggaaaaaggacaaacaatatatgatgtatccatacaaaggaatattatttggctataaaaaagaatgagatatcgattcctgctacaacacagacaaaccttgaaaat---ctgctaaaagaagccagtcacaaaagaccacatattatatgattccatttatgtaaaatgttcagaacagacaaatttatagagacagaacgtagattagtggttgcctagggcttcttggggtcggggaagggtgacagcaaaagggaatggggtt--tgtttgtggtgatga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 215444 443 + 80997621 cacaagtt-aacacagaattatcatctgactcaacaattccgctcccaggcatagacccaaaagaattgaaagcagatgttcaaataaaaacctgtacaccagtgttcacagcagcaccattcacaatagccaaaacg----ggaaacaacacaaatgtccatcaactggaaaaaggacaaacaatatatgatgtatccatacaaaggaatattatttggctataaaaaagaatgagatatcgattcctgctacaacacagacaaaccttgaaaat---ctgctaaaagaagccagtcacaaaagaccacatattatatgattccatttatgtaaaatgttcagaacagacaaatttatagagacagaacgtagattagtggttgcctagggcttcttggggtcggggaagggtgacagcaaaagggaatggggtt--tgtttgtggtgatga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 200786 443 + 74645514 CACAAGTT-AACACAGAATTATCATCTGACTCAACAATTCCGCTCCCAGGCATagacccaaaagaattgaaagcagatgttcaaataaaaacctgtacaccagtgttcacagcagcaccattcacaatagccaaaacg----ggaaacaacacaaatgtccatcaactggaaAAGGGACAAACAATATATGATGTatccatacaaaggaatattatttggttataaaaaagaatgaaatatcgATTCCTGCTACAACACAGACAAACCTTGAAAAT---CTgctaaaagaagccagtcacaaaagaccacatattatatgattccatttacgtAAAATGTTCACAACagacaaatttatagagacagaacgtagattagtggttgcctagggcttcTTGGGGTCGGGGAAGGGTGACAGCAAAAGGGAATGGGGTT--TGTTTGTGGTGATGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 188935 443 + 75148670 gacaagtt-aacacagaattatcatctgactcaacaattccgctcccaggcatagacccaaaataattgaaagcagatgttcaaataaaaacctgtacaccagtgttcatagcagcaccattcacaataaccaaaatg----ggaaacaacacaaatgtccatcgactggaagaaggacaaacaatatatgatgtatccatacaaaggaatattatttggctataaaaaggaatgaagtatcaattcctactacgacacagacaaaccttgaaaat---ctgctaaaagaagccagtcaaaaaagaccacatattatatgattccatttatgtaaaatgttcagaacagacaaatttatagagacagaaagtagattcgtggttgcctagggcttcttggggtcggggaagggtgacagcaaaagggaatggggtt--tgtttgtggTGAGGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15756753 413 - 61074082 AAaaagttaaatacagaattaccatatgactcaacggctccactgctaggtgtgtcccccaaagaa-------------------------------------tgttcatagcagcactgtctacaatggccaaaaggctgtgggaacaaccc-aatgtccattagcaaatgagcagataaacaaaatatggtaaaaccattcagtggaatactgctcggccataaaaaggaacaaagtcccaattcatgctatgacatgggtgaaccttgaagacgtgatgccaaaagaagctggccacaaaagactgcatgccatatga--ctgtttatgtgaaatgtccaaaacaggcaaatctatagagatagaaagtaaattagtggttgcccagggcttatgggggaagagggcaagtaacagcgaaaggatactaggtttaccttcacagtgatga i canFam3.chr9 I 425 I 3357 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=5730.000000 s hg38.chr17_GL383563v3_alt 314180 4 + 375691 TTGG s ponAbe2.chr17 170797 4 + 73212453 TTGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 206761 4 + 80904711 TTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 215887 4 + 80997621 TTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 201229 4 + 74645514 TTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 189378 4 + 75148670 TTGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15757166 3357 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=185446.000000 s hg38.chr17_GL383563v3_alt 314184 123 + 375691 TGATGGTGATTAGAAGGTCATCCATGAC------ATCCCCCATTACTCTGGTGAATGAAGACCATCT-------ATCCCAAATTAATATGTTATTAATTTATTCTCCTCATAGAGAATTTATAGAGT-CTCATTGAC s ponAbe2.chr17 170801 123 + 73212453 TGATGGTGATTAGAAGGTCATCCATGAC------CTTCCCCATTACTCTGGTGAATGAAGACCATCT-------ATCCCAAATTAATATGTTATTAATTTATTCTCCTCATAGAGAATTTATAGTGT-CTCATTGAC i ponAbe2.chr17 C 0 I 3117 s rheMac3.chr16 206765 130 + 80904711 TGATGGTGATTAGAAGGTCATCCATGAC------CTCGCCCATTACTCTGGTGAATGAAGACCATCTTTGCCTCATGTCCACTGGGTATGTTATGCATTTCTTCTCCTCATAGAGAATTTATAGTGT-CTCATTGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 215891 130 + 80997621 TGATGGTGATTAGAAGGTCATCCATGAC------CTCGCCCATTACTCTGGTGAATGAAGACCATCTTTGCCTCATGTCCACTGGGTATGTTATGCATTTCTTCTCCTCATAGAGAATTTATAGTGT-CTCATTGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 201233 130 + 74645514 TGATGGTGATTAGAAGGTCATCCATGAC------CTCGCCCATTACTCTGGTGAATGAAGACCATCTTTGCCTCATGTCCACTGGGTATGTTATGAATTTCTTCTCCTCATAGAGAATTTATAGTGT-CTCATTGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 189382 130 + 75148670 TGATGGTGATTAGAAGGACATCCATGAC------CTCCCCCATTACTCTGGTGAATGAAGACCATCTTTGCCTCATGTCCACTGGGTATGTTATGAATTTCTTCTCCTCACAAAGAATTTATAGTGT-CTCATTGAC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15760523 135 - 61074082 TAACAGTGAGTAG--GGTGATCCATGGCCCTGAACTCCCCCAACAGCCTGGTTAATGAAGACCATCTCTGTCTCATTACCACTGTCTATGCTATTCATGTATTCTCCTCATGGAAAATTCATAGTGTGCTCACTGAC i canFam3.chr9 I 3357 C 0 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 287408 2749 + 82630442 I a score=243901.000000 s hg38.chr17_GL383563v3_alt 314307 233 + 375691 CAACCAGCCAGACATGATGCTAATCTGGGTTCCAGAAACAAGAAACACCACGACAGATCAaggaaattattagtgatggaatccaaatgtcaggcatgtaag-tttcactataacatttgttccactttgctgcatgtttttaattattcataataaattattat----------aaaagtaaAATTACAAGTAGGTATTTTGGGCATTCAACCTGTAGAAA-CCAGGTTCACAACATTAGGAGG s rheMac3.chr16 206895 234 + 80904711 CAACCAGCCAGACGTGATACTAATCTGGGTTCCAAAAACAAGAAACACCACAACAGATAAAGGAAATTGTCAGTGATGGAATCCGAAGGTCAGGCATGTAAG-TTTCACTATAACATTTGTTCCACTTTGCTGCATGTTTTTAATTATTCATAACAAATTATTAT----------AAAAGTAAAATTACAAGTAGATAGCTTGGGCATTCAACCCATAAAAACCCATGTTCACAACATTAGGAGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 216021 233 + 80997621 CAACCAGCCAGACGTGATACTAATCTGGGTTCCAAAAACAAGAAACACCACAACAGATAAAGGAAATTGTCAGTGATGGAATCCGAAGGTCAGGCATGTAAG-TTTCACTATAACATTTGTTCCACTTTGCTGCATGTTTTTAATTATTCATAACAAATTATTAT----------AAAAGTAAAATTACAAGTAGATAGCTTGGGCATTCAACCCATAAAAA-CCAGGTTCACAACATTAGGAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 201363 233 + 74645514 CAACCAGTCAGACGTGATACTAATCTGGGttccaaaaacaagaaacacCACAACAGATAAAGGAAATTGTCAGTGATGGAATCCGAAGGTCAGGCATGTAAG-TTTCACTATAACATTTGTTCCACTTTGCTGcatgtttttaattattcataacaaattattat----------aaaagtaaaattacaagTAGATAGCTTGGGCATTCAACCCATAAAAC-CCAGGTTCACAACATTAGGAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 189512 233 + 75148670 CAACCAGTCAGACATGATACTAATCTGGGTTCCAAAAACAAGAAACACCACAACAGATAAAGGAAATTGTCAGTGATGGAATCCGAAGGTCAGGCATGTAAG-TTTCACTATAATATTTGTTCCACTTTGCTGCATGTTTTTAATTATTCATAACAAATTATTAT----------AAAAGTAAAATTACAAGTAGATAGCTTGGGCATTCAACCCGTAAAAA-CCAGGTTCACAACATTAGGAGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15760658 237 - 61074082 ACACTAGGCAGAGATGACGCTGACCTGAGTTCCAGAAGAGGGAAACAGAAGAGC------agtaaaacattaaaaacagaatttaagtggtgggcatgtaggatttcactggaaaagtctttcaactttgctttacatttaaaatttttcataataaattattgtgtaaaaaaAAAAAGGAAAAATTACAAATGAGTATTCTGGGCACTCAACTCATAAAA--CCAGATTCACAGCCTCAGTGGG i canFam3.chr9 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 287408 2749 + 82630442 I a score=797747.000000 s hg38.chr17_GL383563v3_alt 314540 523 + 375691 ACACAGACAATGACCTTGCAAGGTCCCACTTGCAAAAAAA-CACATCCATGCCTGTTCCTGCTCCCCACAGGTGTCCACAGGCGACACACCAGGTGACATGGCTGCCTCAGGGAAGCAGAAGATGCA--GGACTTCCCTATCGTGGCACAGGACTGAGGGCTGTGGAGTCAGTCTCTACGTAAACACATTCAGCTCTCTGAGTTCAAACCAAGTCAGAAAATGGGCAGAG---CCACTGCTTTTATTAGCTCCAAATGAATCTGGCAAGGGATGCTGGGACTGACAAAGCAGGCGCTCAACCCTGTCACGCACTCCAGGTAGCCCTGCCAGCAGGCTGATGAATTCTCTTCTTCTgacaggtgacaaagggcagtggttacaggtctgggctcagggtcgcgtatctgaggtttgcattctgg--ctgcgaattatgagcttggtgaccttgggcaacttccttcatttctctaaggcttgggtgcatcatctat-aaatgagtagctgcctcctggggctattgggaagaa s panTro4.chr17 290157 524 + 82630442 ACACAGACAATGACCTTGCAAGGTCCCACTTGCAAAAAAAACACATCCATGCCTGTTCCTGCTCCCCACAGGTGTCCACAGGTGACACACCAGGTGACAAGGCTGCCTCAGGGAAGCAGAAGATGCA--GGACTTCCCTATCGTGGCACAGGACTGAGGGCTGTGGAGTCAGTCTCTACGTAAACACATTCAGCTCTCTGAGTTCAAACCAAGTCAGAAAATGGGCAGAG---CCACTGCTTTTATTAGCTCCAAATGAATCTGGCAAGGGATGCTGGGACTGACCAAGCAGGCGCTCAACCCTGTCACTCACTCCAGGTAGCCCTGCCAACAGGCTGATGAATTCTCTTCTTCTGACAGGTGACAAAGGgcagtggttacaggtctgggctcagggtcgcgtatctgaggtttgcattctgg--ttgcgaattatgagcttggtgaccttgggcaacttccttcatttctctaagccttaggtgcatcatctat-aaatgagtagctgcctcctggggctattgggaagaA i panTro4.chr17 I 2749 M 1973 s rheMac3.chr16 207129 519 + 80904711 ACACAGACAAAGACCTTGGGAGCTCCCACTCGCAATAAAA-CATATCCATGCCTGTTCCTGCTCCCCACAGGTGTCCACAGGTGACACACCAGGTGACACGGCTGCCTGAAG------GAAGATGCA--GGACTTCCCTATTGTGGCACAGGACTGGGGACTGTGGAGACAGTCTCTACTTTAACACATTCAGCTCTCTGAGTTCAAAGCGAGTCAGAAAATGGGCAGAG---CCACTATTTTTATTACCTCAAAATGAATCTGGCAAACGATGCTGGGGCTGACCAAGCAGGCGTTCAACCCGGTCACACACTCCAGGTAGCCCCGCTAGCAGGCTGACAAATTCTCTTCTTCTGCCAGGTGACAAAGGgcagtggttacaggtccgggctcagggtcacgtatctgaggtttgcattctggctctgtgaattatgagcttggtgacctcgggtaacttccttcatttctctaagccttaggtgcatcacccat-aaatgagtagctgcctcctggggctattgggaagaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 216254 519 + 80997621 ACACAGACAAAGACCTTGGGAGCTCCCACTCGCAATAAAA-CACATCCATGCCTGTTCCTGCTCCCCACAGGTGTCCACAGGTGACACACCAGGTGACACGGCTGCCTGAAG------GAAGATGCA--GGACTTCCCTATTGTGGCACAGGACTGGGGACTGTGGAGACAGTCTCTACTTTAACACATTCAGCTCTCTGAGTTCAAAGCGAGTCAGAAAATGGGCAGAG---CCACTATTTTTATTACCTCAAAATGAATCTGGCAAACGATGCTGGGGCTGACCAAGCAGGCGTTCAACCCGGTCACACACTCCAGGTAGCCCCGCTAGCGGGCTGACAAATTCTCTTCTTCTGCCAGGTGACAAAGGgcagtggttacaggtccgggctcagggtcacgtatctgaggtttgcattctggctctgtgaattatgagcttggtgacctcgggtaacttccttcatttctctaagccttaggtgcatcacccat-aaatgagtagctgcctcctggggctattgggaagaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 201596 515 + 74645514 ACACAGACAAAGACCTTGGGAGCTCCCACTCGCAATAAAA-CACATCCATGCCTGTTCCTGCTCCCCACAGGTGTCCACAGGTGACACACCAGGTGACACGGCTGCCTGAAG------GAAGATGCA--GGACTTCCCTATCGTGGCACAGGACTGGGGACTGTGGAGACAGTCTCTACTTTAACACATTCAGCTCTCTGAGTTCAAAGCGAGTCAGAAAATGGGCAGAG---CCACTATTTTTATTACCTCAAAATGAATCTGGCAAAGGATGCTGGGGCTGACCAAGCAGGCGTTCAACCCGGTCACACACTCCAGGTAGCCCCGCTAGCAGGCTGACAAATTCTCTTCTTCTGCCAGGTGACAAAGGGCAGTGGTTACAGGTCCGGGCTCAGGGTCACGTATCTGAGGTTTGCATTCTGGCTCTGTGAATTATGAGCTTGGTGACCTCGGGCAA----CTTCATTTCTCTAAGCCTTAGGTGCATCACCCAT-AAATGAGTAGCTGCCTCCTGGGGCTATTGGGAAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 189745 525 + 75148670 ACACAGACAAGGACCTTGGGAGCTCCCACTCGCAAAAAAT-CACATCCATGCCTGTTCCTGCTCCCCACAGGTGTCCACAGGTGACACACCAGGTGACACGGCTGCCTGAAGGAAGGAGAAGATGCA--GGACTTCCCTATCGTGGCACAGGACTGGGGACTGTGGAGACCGTCTCTACTTTAACACATTCAGCTCTCTGAGTTCAAAGCGAGTCAGAAAATGGGCAGAG---CCACTGTTTTTATTACCTCCAAATGAATCTGGCAAAGGATGCTGGGGCTGACCAAGCAGGCGTTCAACCCAGTCACACACTCCAGGTAGCCCCGCTAGCAGGCTGACAAATTATCTTCTTCTGCCAGGTGACAAAGGgcagtggttacaggtccgggttcagggtcgcgtatctgaggtttgcattctggctctgtgaattacgagcttggtgacctcgggcaacttccttcacttctctaagccttaggtgcatcatccat-aaatgagtagctgcctcctggggctactgggaagaa i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15760895 505 - 61074082 -AGGAAACAATGAGCATAGGCAGCCCCATTTGCAGGTAAC-TACCCTCACACGTGCTCCTTCTCCTCACAGGCATCTG------------CAGGTGACAGGGTGGCCTGGAA------TAAGGAGCAGTGAACTTCCCTGTCACGGCAGAGACCTGGGGTCTGTAGAGACAGTATCCAGATAAATACATTCAGCTCTTTGGGTTTAGACCAAGTCAGAAAATGGGCAGCAGCTCCACTGTTTTTATTAGTTCCAAATGAATTCGGCAATGGATGCCCAGGCTGACCACACAGTC-CCCAACCTGGTCCTGTATACCAGGTGGTCCTGCCAAGGGGCAGACAAATACACCTTTTCTGCC--GTaataaagggcaatggttacaagtctgttctctggatcaggtgtt--gggtttgccttct-gctctgtgaattattagctcagtgaccttggacagctt-cttgacttctctaaggcttaggtgcctcatctgtaaaatgaggagctgcctcctggggctgttaagaagaa i canFam3.chr9 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I a score=332550.000000 s hg38.chr17_GL383563v3_alt 315063 321 + 375691 taaattcaaccggtggttctgaatcggagtgattttgtcccccaagagacatttggaaatatctggagacatagttgcgggtgctgttgactactatccatccagtgggtagaggccaggaatgctgctaaacatccc-tgaggcacaaaacagcccccatgacagagttatccagcctaaacg-ccaaagcactggagttgagaaaacctgatagaggtggtgtagg-taacacaaccagcacaaagcctgtcacagtgtgcattctcagggtagggccatcatGGCcatcctcatcatcaccatcatcatcatcatcataat s rheMac3.chr16 207648 318 + 80904711 taaattcaatcggtggttctgaatcagagtgattttgtcccccaagagacttttgaaagtatctggagacacagtagggggtgctactaaccactatccatccagtgggtagaggtcaggaacgctgctaaacatccc-tgaggcacaaaccagcccccatgacagagttatccagcctaaacg-ccaaagcacttgagttgagaaaacctgatagaggtggtgcagg-taacacaaccagcacaaagcctgtcacagtgtgcactctcagggtagggccatcatGGCTGTCCTcatcatcac---catcgtcatcatcatgat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 216773 315 + 80997621 taaattcaatcggtggttctgaatcagagtgattttgtcccccaagagacttttggaagtatctggagacacagtagggggtgctactaaccactatccatccagtgggtagaggtcaggaacgctgctaaacatccc-tgaggcacaaaccagcccccatgacagagttatccagcctaaacg-ccaaagcacttgagttgagaaaacctgatagaggtggtgcagg-taacacaaccagcacaaagcctgtcacagtgtgcactttcagggtagggccatcatGGCTG---tcatcatcac---catcgtcatcatcatgat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202111 318 + 74645514 TAAATTCAATCGGTGGTTCTGAATCAGAGTGATTTTGTCCCCCAAGAGACTTTTGGAAATATCTGGAGACACAGTAGGGGGTGCTACTAACCACTATCCATCCAGTGGGTAGAGGTCAGGAACGCTGCTAAACATCCC-TGAGGCACAAACCAGCCCCCATGACAGAGTTATCCAGCCTACACG-CCAAAGCACTTGAGTTGAGAAAACCTGATAGAGGTGGTGCAGG-TAACACAACCAGCACAAAGCCTGTCACAGTGTGCACTCTCAGGGTAGGGccatcatggctgtcctcatcatcac---catcgtcatcatcatgat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 190270 318 + 75148670 taaattcaatcggtggttctgaatcagagtgattttgtcccccaagagacttttggaaatatctggagacatagtggggggtgctactaaccactatccatccagtgggtagaggccaggaatgctgctaaacatccc-tgaggcacaaaccagcccccgtaacagagttatccggcctaaatg-ccaaagcacttgagttgagaaaacctgatagaggtggtgcagg-caacacaaccagcacaaagcctgtcacagtgtgcactcTCAGGGTAGGGCCATCATGGCTGTCCtcatcatcac---catcgtcatcatcatgat i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15761400 297 - 61074082 taaattagatcagtggttctgaatcagggtgattttgtctcccaagggacatctggcaa-------------------gggggccactggcta----cagcccagcgagtagaagccaat-atgctgctaaacatcctacaaggcacagtccagccccctacattaaatcatccagctgaaaagatcaaagtgcaag-tttgagaaaccctgatttagacggtacaggttaagacatccagcacaggacctatgacacggtgcgctctca--CTGAGGCcaccatgaccttcaccaccatcgccctcaccatcactgccatcat i canFam3.chr9 C 0 I 715 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 290681 1973 + 82630442 M a score=64002.000000 s hg38.chr17_GL383563v3_alt 315384 83 + 375691 attcaccatcatcaccatcagtcatcatcattaccatcaccatcactgtcatctctgtcatcaccaccatcatcactatcatc--- s rheMac3.chr16 207966 83 + 80904711 atgcaccattatcaccatcagtcatcatcattaccatcaccatcactgtcatctctg---tcaccaccatcatcaccatcatcatc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 217088 83 + 80997621 atgcaccattatcaccatcagtcatcatcattaccatcaccatcactgtcatctctg---tcaccaccatcatcaccatcattgtc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202429 82 + 74645514 atgcaccattatcaccatcagtcatcatcattaccatcaccatcactgtcatctctg---tcaccaccatcatcaccatcatcgt- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 190588 79 + 75148670 atgcaccatcattaccatca-tcatcatcatcaccatcaccatcactgtcatctgtg---tcaccaccatcatcaccatcatc--- i chlSab2.chr16 C 0 T 8864 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 290681 1973 + 82630442 M a score=573.000000 s hg38.chr17_GL383563v3_alt 315467 2 + 375691 ac s rheMac3.chr16 208049 2 + 80904711 ac i rheMac3.chr16 C 0 I 1206 s macFas5.chr16 217171 2 + 80997621 ac i macFas5.chr16 C 0 I 18 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 190667 8864 + 75148670 T e papAnu2.chr16 202511 0 + 74645514 C e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 290681 1973 + 82630442 M a score=24332.000000 s hg38.chr17_GL383563v3_alt 315469 184 + 375691 ccccatcatcaccatcatcatcgtcaccactgtcatcatcgtca------tcactatcaccatcattgtcaccatcatattcacctcca--gtcatcatcaccatcagacattgtcatcatcaccatcat----catttttaccatcatgatcaccaacaccactataatcaccctcatcatcatcaccatcatca s macFas5.chr16 217191 190 + 80997621 cctcaccatcatcaccaccatcaccatcactgtcaccaacatcatcatattcaccaccattagcaccatcaccatca---tcaccatcactgtcatcattaccatcagtcatcatcaccatcgccaccatcagaca---ttatcatcatcatccacatcatcaccaccatcagtgtcatcatcatcaccaacacca i macFas5.chr16 I 18 C 0 s papAnu2.chr16 202511 173 + 74645514 ---caccaataccactatcatcaccctcaccatcaccaccacca------tcaccaccatcaccaccatcaccacca---tcaccacca---tcaccatcatcatcact-gtcatctctgtcaccaccat----ca---tcaccatcatcgtcaccaataccactatcatcaccctcaccatcatcacccccatca i papAnu2.chr16 C 0 I 105 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 190667 8864 + 75148670 T e rheMac3.chr16 208051 1206 + 80904711 I e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 290681 1973 + 82630442 M a score=15501.000000 s hg38.chr17_GL383563v3_alt 315653 346 + 375691 ctatc---atcaccatcactgtta-catcatcatcatattcacctccatcagtcaccatcaccaccatcactgtcatctcggttaccaccaccatcactataatcatcaccatcaccatcaccgtcatcattattaccatcatcatcaccaacaccactatcataaccatcaccaccatcagacatcatcaccatcatcacccacatcatcatcaccatcaccaccatcagacatcatcaccactatcatgaccatcacccacatcatcatcatcaccatcactgtcatctgtgtcaccaccaccatcatcactatcatcatcaccatcatcatgatcaccatcatcatc s macFas5.chr16 217381 297 + 80997621 tcatcgctatcaccatcagtgccaccatcatcatcatattcacctccatcagtcatcatcaccatcatcaccatca-----------------------gtcatcatcaccatcaccatcactgtcatctctgtcaccaccatcatcaccaataccactctcatcaccctcatcatcat----caccatcactgtcac------catcatcatcatattcacctccatcagtcatcatcacc---atcaccaccatca--gacattgtcatcatcac---------------tgtcatcaccatcatcattattaccatcatcaccaacaccactatcatcatcctcatc i macFas5.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 190667 8864 + 75148670 T e papAnu2.chr16 202684 105 + 74645514 I e rheMac3.chr16 208051 1206 + 80904711 I e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 290681 1973 + 82630442 M a score=0.000000 s hg38.chr17_GL383563v3_alt 315999 157 + 375691 accaacaccactatcatcgccctcatcatcaccatcattgtcaatcagcatcaccatcatcactatcatcacaatcactgttacatcatcaccatgttcacctccatcagtcatcatcaccaccatcactgtcatctcagttaccaccatcactata e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 190667 8864 + 75148670 T e papAnu2.chr16 202684 105 + 74645514 I e rheMac3.chr16 208051 1206 + 80904711 I e macFas5.chr16 217678 0 + 80997621 C e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 290681 1973 + 82630442 M a score=14642.000000 s hg38.chr17_GL383563v3_alt 316156 59 + 375691 atcatcaccatcattgtcaatcaccatcaccatcatcactatcatcacaatcactgtta- s rheMac3.chr16 209257 60 + 80904711 atcatcacaatcattgtcaatcaccatcaccgtcatcactatcatcaccatcactgtcac i rheMac3.chr16 I 1206 C 0 s macFas5.chr16 217678 60 + 80997621 atcatcaccatcattgtcaatcaccatcaccgtcatcactatcatcaccatcactgtcac i macFas5.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 190667 8864 + 75148670 T e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 170924 3117 + 73212453 I e panTro4.chr17 290681 1973 + 82630442 M a score=5357.000000 s hg38.chr17_GL383563v3_alt 316215 11 + 375691 catcatcatat s ponAbe2.chr17 174041 11 + 73212453 catcatcatat i ponAbe2.chr17 I 3117 C 0 s rheMac3.chr16 209317 11 + 80904711 catcatcctat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 217738 11 + 80997621 catcatcctat i macFas5.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 190667 8864 + 75148670 T e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 290681 1973 + 82630442 M a score=37597.000000 s hg38.chr17_GL383563v3_alt 316226 50 + 375691 tcacctccatcagacattgtcaccatcagtcatcactattctcatcatca s ponAbe2.chr17 174052 50 + 73212453 ttgcctCCATCAGACATTGTCACCATCAGTCATCACTATCCTCATGATCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 209328 49 + 80904711 tcaccaccatcaggc-ttgtcaccatcaatcatcactaccctcaccatca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 217749 49 + 80997621 tcaccaccatcaggc-ttgtcaccatcaatcatcactaccctcaccatca i macFas5.chr16 C 0 C 0 s chlSab2.chr16 181803 50 + 75148670 tcaccaccatcagacattgtcaccatcaatcatcactaccctcaccatca i chlSab2.chr16 T 8864 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15761697 715 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 290681 1973 + 82630442 M a score=171726.000000 s hg38.chr17_GL383563v3_alt 316276 166 + 375691 tcctcttcTGTATTGGGGGAAATGCCCAGAGGGGCTCATATCTGGGCAGG----AGACCTGATGAATAGAAAGTGTATATACTGGGAAGAGGAATCAGCATGAGGGGAAAGGCCACCTGGCCTTGCTGAGAGAGGCAGGAGGCCC-GTTGGTGAGGCCAAATCAAAAACCA s ponAbe2.chr17 174102 166 + 73212453 TCCTCTTCTGTATTGTGAGAAATGCCCAGAGGGGCTCATATCTGGGCAGT----AGGCCTGATGAATAGAAAGGGTATATACTGGGAAGAGGAATCAGCATGAGGCGAAAGGCCACGTGGCCTTGCTGAGAGAGGCAGGAGGCCT-GTTGGTGAGGCCATATCAAAAACCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 209377 165 + 80904711 tcCTCTTCTGTATTGTGGGAAATGCCCAGAGGGGCTAACATCTGGGCAGG----AGGCCTGATGAATAGAAAGTGTATCTACTGGGAAGAGGAATCAGCATGAGGGGAAAGGCCACGTGGCCTTGCTGAGACAGGCAGGAGGCCT--TTGGTGAGGCCATATCAAAAACCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 217798 165 + 80997621 tcctcttcTGTATTGTGGGAAATGCCCAGAGGGGCTCACATCTGGGCAGG----AGGCCTGATGAATAGAAAGTGTATCTACTGGGAAGAGGAATCAGCATGAGGGGAAAGGCCACGTGGCCTTGCTGAGACAGGCAGGAGGCCT--TTGGTGAGGCCATATCAAAAACCA i macFas5.chr16 C 0 C 0 s chlSab2.chr16 181853 163 + 75148670 TCCTCTTCTGTATTGTGGGAAATGCCCAGAGGGGCTCACATCGGGGCAGG----AGGCCTGATGAATAGAAAGTGTATCTACTGGGAAGAGGAATCAGCATGAGGGGAAAGGCCACATGGCCTTGCTGAG--AGGCAGGAGGCCT--TTGGTGAAGCCATATCAAAAACCA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15762412 170 - 61074082 TTCCATTTGGTTTTGTGGGAAATGCCCAAAGGGCATCATTTCTGGGCAGGGCACAGGCCTGGGGAGCAGAAATTCTAGCTCCTCGGAAAAGAAATCAGCATGAGG-GAAGGGCCATACTGCCTTCCCAATAGACCTATAGGGGCTCAATGGTGAGGCTGAATGAGAAACCA i canFam3.chr9 I 715 C 0 e mm10.chr11 75927070 531 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 290681 1973 + 82630442 M a score=96118.000000 s hg38.chr17_GL383563v3_alt 316442 107 + 375691 TCCTGgcctgtaatcccagcattttgggaggccaaggcgggaggatcgattgagcccaggagtttgaatccagcctgggcaacatggtgaaaccttgtctctgaaaa s ponAbe2.chr17 174268 107 + 73212453 TCCTAgcctgtaatcccagcattttgggaggccaaggcgggaggatcaattgagcccaggagtttgaatccagcctgggcaacatggtgaaaccttgtctctgaaaa i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 209542 107 + 80904711 TCCTAgtctgtagtcccagcattttgggaggccaaggcgggaggatccattgagcccaggagtttgaaaccagcctgggcaacatggtgaaaccttgtctctgaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 217963 107 + 80997621 TCCTAgtctgtagtcccagcattttgggaggccaaggcgggaggatccattgagcccaggagtttgaaaccagcctgggcaacatggtgaaaccttgtctctgaaaa i macFas5.chr16 C 0 C 0 s chlSab2.chr16 182016 107 + 75148670 TCCTAgcctgtagtcccagcattttgggaggccaagacgggaggatccattaagcccagaagtttgaaaccagcctgggcaacatggtgaaaccttgtctctgaaaa i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927070 531 + 122082543 I e canFam3.chr9 15762582 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 290681 1973 + 82630442 M a score=148653.000000 s hg38.chr17_GL383563v3_alt 316549 194 + 375691 cacacacacacaca----------------------------gaaaaaattagctgggctcagtgacacacacctgtaatcccagctacttgggaggctgaggtaggagggtcacctgagcctggggaggttaagcctgcagtgagccatgatcgtgccactgcactccagg------ctgggctacagagtgagaccctgtctcaaaggcaaacaaacaaacagaaC s ponAbe2.chr17 174375 222 + 73212453 cacacacacacacacacacacacacacacacacacacacacagaaaaaattagctgggctcagtgacacacacctgtaatcccagctacttgggaggctaagataggagggtcacctgagcctggggaggttaaggctgcagtgagccatgattgtgccactgcactccagg------ctgggccacagagtgagaccttgcctcaaaggcaaacaaacaaggagaaC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 209649 216 + 80904711 -acaaaaacaaaca-----aacaaaaaaaacacgcacacaaagaaaaaattagctgggctcagtgacatgcacctgtaatcccagctacttgggaggctgaggtaggagggtcacctgagcctggggaggttaaggctgcagagagccgtgatcgtacaactgcactccagg------ctgggcaacagagtgagtctctgtctcaaaggcaaacaaacaaGCACAAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 218070 216 + 80997621 -acaaaaacaaaca-----aacaaaaaaaacacgcacacaaagaaaaaattagctgggctcagtgacatgcacctgtaatcccagctacttgggaggctgaggtaggagggtcacctgagcctggggaggttaaggctgcagagagccgtgatcgtacaactgcactccagg------ctgggcaacagagtgagtctctgtctcaaaggcaaacaaacaaGCACAAC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 182123 195 + 75148670 -aaaaaaa--------------aaaaaaagcacac--------aaaaaattagctgggctcagtgacatgcacctgtaatcccagctacttgggaggctgaggtaggagggtcacctgagcctggggaggttaaggctgcagacagccgtgatcgtaccactgcactccagg------ctgggcaacagagtgagtctctgtctcaaagg----caaacaaGCACAAC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75927601 146 + 122082543 cacatatacacacagagttaaaaaataaaGT------------AAACCCCTGGGtggg--cagggggatacaggtataattcaagc-actcaggaggctgaggt-------------------------gatggggctgcaat----------------------ttctaggcaaaacctgggcc---tagtgagagcctatctcAAGCC-----------------T i mm10.chr11 I 531 C 0 e canFam3.chr9 15762582 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 290681 1973 + 82630442 M a score=162560.000000 s hg38.chr17_GL383563v3_alt 316743 132 + 375691 ACCCTAAATCCCATCTGCAAAGGTGGCAGTAGCTGGCAAGTCTACAGCCACTGCTGTGAGGACTCCATCTGCCTGGTCACTTTCCCACCTCTCT--AA----CTTCTCATTGCCATTAGCAGGAACTTCCTCAAACAA s ponAbe2.chr17 174597 132 + 73212453 ACCCTAAATCCCATCCGCAAAGGTGGCAGTAGCTGGCAAGTCTACAGCCACTGCTGTGAGGACTCCGTCTGCCTGGTCACTTTCCCACTGCTCT--AA----CTTCTCATTGCCATTAGCAGGAACTTCCTCAAACAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 209865 132 + 80904711 ACCGTAAATCCCATCCGCAAAGGTGCCAGTAGCTGGCAAGTCTACAGCCACTGCTGTGAGGACTCCGTCTGCATGGTCACTTTCCCACCTCTCT--AA----CTTCTCATTGCCATTAGCAGGAACTTCCTTGAACAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 218286 132 + 80997621 ACCGTAAATCCCATCCGCAAAGGTGCCAGTAGCTGGCAAGTCTACAGCCACTGCTGTGAGGACTCCGTCTGCATGGTCACTTTCCCACCTCTCT--AA----CTTCTCATTGCCATTAGCAGGAACTTCCTTGAACAA i macFas5.chr16 C 0 C 0 s chlSab2.chr16 182318 131 + 75148670 ACCGTAAATCCCATCCGCAAAGGTGCCAGTAGCTGGCAAGTCTACAGCCACTGCTGTGAGGACTCCGTCTGCCTGGTCACTTTCCCACCTCTCT--AA----CTTCTCATTGCCA-TAACAGGAACTTCCTCAAACAA i chlSab2.chr16 C 0 C 0 s mm10.chr11 75927747 131 + 122082543 ATCTCTAGGCTTGTCTCCAAAGGTTCCAGGAATTGGAACATCTAGAGCTATTTTGAAGAGGACTCTGTCTACCGAGTCACTTTCTGGCTTCTCTTGAG----TCTCTCACTACCCC---CAGAAGTTTTCTCAGAGAA i mm10.chr11 C 0 I 6620 s canFam3.chr9 15762582 135 - 61074082 ACCCCAATGCCCATGTCTAATGAAGCCAGGAGCCAGCCAGTCTGGATCCACTAATG-GAGGCCTCCACCAACCTGGTCACTTTCCCACCACCCC--AAAATTTTCCTCACTGCCAACAGCAGGAACTCACTCAAACAA i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 290681 1973 + 82630442 M a score=172988.000000 s hg38.chr17_GL383563v3_alt 316875 175 + 375691 -AACCACCGGGGGGTTCATCCTCAGAGAAGCTGGAAGGGGGAATCCCTGGGGTTTCTACGCCTGTATAGCCAGGCTTGGAGAAACAGAAACAGCCA---CCC-----AGGACT-----------GGCTAGAGAA------CTGAGTCCTGGGGCAA-----GTGAGAGGAGGCTAGGAGCAGTGCCCTGAGGCTGAGAAGTGGGTG s ponAbe2.chr17 174729 174 + 73212453 -AACCACCGGGGG-TTCATCTTCAGAGAAGCTGGAAGGGGGAATCACTGGGATTTCTACACCTGTATAGCCAGGCTTGGAGAAACAGAAACAGCCA---CCC-----AGGACT-----------GGCTAGAGAA------CTGAGTCCTGGGGCAA-----GTGAGAGGAGGCTAGGAGCCGTGCCCTGAGGCTGAGAAGTGGGTG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 209997 173 + 80904711 -ACCCACCAGGGG-TTCATGCTCAGAGAAGCCGGAAGGGGG-ATCGCTGGGGTTTCTACACCTGTGTAGCCAGACTTGGGGAAACAGAAACAGCCA---CCC-----AGGACT-----------GGCTAGAGAA------CTGAGTCCTGGGGCAA-----GTGAGAGGAGGCCAGGAGCAGTGCCCTGAGGCTGAGAAGTGGGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 218418 173 + 80997621 -ACCCACCAGGGG-TTCATGCTCAGAGAAGCCGGAAGGGGG-ATCGCTGGGGTTTCTACACCTGTGTAGCCAGACTTGGGGAAACAGAAACAGCCA---CCC-----AGGACT-----------GGCTAGAGAA------CTGAGTCCTGGGGCAA-----GTGAGAGGAGGCCAGGAGCAGTGCCCTGAGGCTGAGAAGTGGGTG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 182449 173 + 75148670 -ACCCACCGGGGG-TTCATGCTCAGAGAAGCTGGAAGGGGG-ATCGCTGGGGTTTCTACACCTGTGTAGCCAGACTTGGGGAAACAGAAACAGCCA---CCC-----AGGACT-----------GGCTAGAGAA------GTGAGTCCTGGAGCAA-----GTGAGAGGAGGCCAGGAGCAGTGTCCTGAGGCTGAGAAGTGGGTG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15762717 200 - 61074082 AACGGACCTGGGG-TTTATCCTCAGAGAAATCAGAATGAGGAGCAGCTGGGATGTCTACACT--TAGAGTCAGGCTTGGAGAAGCAGCAGGGGACAAGGCCCGTAGAAGGAGTAAACAACAGAGGGCGAGTGCAGCAAGTCTGAGGCTTGTAACAAGGGCGGTGAGAGGAGGCCAGGCAAGGG---CTAAGGCTGAGAAGTGAGTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202684 105 + 74645514 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 290681 1973 + 82630442 M a score=52069.000000 s hg38.chr17_GL383563v3_alt 317050 32 + 375691 CCTGCTGGGGCACGCGTGCTCCCCATCTG--CAC s panTro4.chr17 292678 31 + 82630442 CCTGCTGGGGCACGCCTGCTCCC-ATCTG--CGC i panTro4.chr17 M 1973 C 0 s ponAbe2.chr17 174903 32 + 73212453 CCTGCTGGGGCATGTGTGCTCCCCATCTG--CCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 210170 32 + 80904711 CCTGCTGGGGCATGCGTGCTCCCCGTCTG--CAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 218591 34 + 80997621 CCTGCTGGGGCATGCGTGCTCCCCGTCTGCACAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202789 32 + 74645514 CCTGCTGGGGCATGCGTGCTCCCCATCTG--CAC i papAnu2.chr16 I 105 T 37 s chlSab2.chr16 182622 32 + 75148670 CCTGCTGGGGCATGCGTGCTCCCCATCTG--CAC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15762917 14 - 61074082 CCTGCTGGGGCATG-------------------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I a score=443.000000 s hg38.chr17_GL383563v3_alt 317082 1 + 375691 G s panTro4.chr17 292709 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 174935 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 210202 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 218625 1 + 80997621 A i macFas5.chr16 C 0 C 0 s chlSab2.chr16 182654 1 + 75148670 A i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762931 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202821 37 + 74645514 T e nomLeu3.chr19 284567 129 - 81552678 I a score=78890.000000 s hg38.chr17_GL383563v3_alt 317083 44 + 375691 CACACCCTGCTGGGGCACGCGTGCTCCCCATCTGCGCGCACACC s panTro4.chr17 292710 44 + 82630442 CACACCCTGCTGGGGCACGCGTGCTCCCCATCTGCGCGCACACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 174936 44 + 73212453 CACACCCTGCTGGGGCATGTGTGCTCCCCATCTGCCCGCACACC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 210203 44 + 80904711 CACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGCACACACACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 218626 44 + 80997621 CACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGCATGCACACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202784 42 + 74645514 CACACCCTGCTGGGGCATGCGTGCTCCCCATCTGCACACACC-- i papAnu2.chr16 T 37 C 0 s chlSab2.chr16 182655 44 + 75148670 CACACCCTGCTGGGGCATGCGCGCTCCCCGTCTGCACACACACC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15762931 26 - 61074082 ------------------ACATGTGCCCCATATGAGCACACATC i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I a score=4011.000000 s hg38.chr17_GL383563v3_alt 317127 2 + 375691 CT s panTro4.chr17 292754 2 + 82630442 CT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 174980 2 + 73212453 CT i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218670 2 + 80997621 CT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202826 2 + 74645514 CT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 182699 2 + 75148670 CT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15762957 2 - 61074082 CT i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=34078.000000 s hg38.chr17_GL383563v3_alt 317129 27 + 375691 GCTGGGGCACGCGTGCTCCCCATCTGC s panTro4.chr17 292756 27 + 82630442 GCTGGGGCACGCCGGCTCCCCATCTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 174982 27 + 73212453 GCTGGGGCATGTGTGCTCCCCATCTGC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218672 27 + 80997621 GCTGGGGCATGCGTGCTCCCCGTCTGC i macFas5.chr16 C 0 T 38 s papAnu2.chr16 202828 27 + 74645514 GCTGGGGCATGCGTGCTCCCCGTCTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 182701 27 + 75148670 GCTGGGGCATGCGCGCTCCCCGTCTGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=-405.000000 s hg38.chr17_GL383563v3_alt 317156 1 + 375691 G s panTro4.chr17 292783 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175009 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218661 1 + 80997621 A i macFas5.chr16 T 38 C 0 s papAnu2.chr16 202855 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 182728 1 + 75148670 A i chlSab2.chr16 C 0 T 38 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=886.000000 s hg38.chr17_GL383563v3_alt 317157 2 + 375691 TG s panTro4.chr17 292784 2 + 82630442 CG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175010 2 + 73212453 CG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218662 2 + 80997621 TG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202856 2 + 74645514 CA i papAnu2.chr16 C 0 T 74 s chlSab2.chr16 182691 2 + 75148670 CA i chlSab2.chr16 T 38 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=46208.000000 s hg38.chr17_GL383563v3_alt 317159 35 + 375691 CATACCCTACTGGGGCACGCGTGCTCCCCATCTGC s panTro4.chr17 292786 35 + 82630442 CACACCCTGCTGGGGCATGCATGCTCCCCATCTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175012 35 + 73212453 CACACCCTGCTGGGGCATGTGTGCTCCCCATCTGC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218664 35 + 80997621 CACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGC i macFas5.chr16 C 0 T 38 s papAnu2.chr16 202784 35 + 74645514 CACACCCTGCTGGGGCATGCGTGCTCCCCATCTGC i papAnu2.chr16 T 74 C 0 s chlSab2.chr16 182693 35 + 75148670 CACACCCTGCTGGGGCATGCGCGCTCCCCGTCTGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=-405.000000 s hg38.chr17_GL383563v3_alt 317194 1 + 375691 G s panTro4.chr17 292821 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175047 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218661 1 + 80997621 A i macFas5.chr16 T 38 C 0 s papAnu2.chr16 202819 1 + 74645514 A i papAnu2.chr16 C 0 T 36 s chlSab2.chr16 182728 1 + 75148670 A i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=681.000000 s hg38.chr17_GL383563v3_alt 317195 2 + 375691 TG s panTro4.chr17 292822 2 + 82630442 CG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175048 2 + 73212453 CG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218662 2 + 80997621 TG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 182729 2 + 75148670 CA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202820 36 + 74645514 T e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=48375.000000 s hg38.chr17_GL383563v3_alt 317197 43 + 375691 CACACCCTGCTGGGGCACGCGTGCTCCCCATCTGCATGCACAC s panTro4.chr17 292824 43 + 82630442 CACACCCTGCTGGGGTATGCGTGCTCCCCATCTGCACGCACAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175050 43 + 73212453 CACACCCTGCTGGGGCATGTGTGCTCCCCATCTGCCCGCACAC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218664 41 + 80997621 CACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGCACACAC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202784 36 + 74645514 CACACCCTGCTGGGGCATGCGTGCTCCCCATCTGCA------- i papAnu2.chr16 T 36 C 0 s chlSab2.chr16 182731 43 + 75148670 CACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGCACACACAC i chlSab2.chr16 C 0 T 45 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=7179.000000 s hg38.chr17_GL383563v3_alt 317240 24 + 375691 CCTGCTGAGGCAAGCGTGCTCCCC s panTro4.chr17 292867 24 + 82630442 CCTGCTGAGGCAAGCGTGCTCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175093 20 + 73212453 CCTGCTGGGACATTTGTGCT---- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218705 20 + 80997621 CCTGCTGGGGCATGCGTGCT---- i macFas5.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762959 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 182774 45 + 75148670 T e papAnu2.chr16 202820 0 + 74645514 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=2618.000000 s hg38.chr17_GL383563v3_alt 317264 16 + 375691 AACTGCCCCATCTGCC-- s panTro4.chr17 292891 16 + 82630442 ATCTGCCCCATCTGCT-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175113 11 + 73212453 -----CCCCATCTGCC-- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218725 11 + 80997621 -----CCCCGTCTGCA-- i macFas5.chr16 C 0 T 37 s canFam3.chr9 15762959 9 - 61074082 ---------AACTGCTCA i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 182774 45 + 75148670 T e papAnu2.chr16 202820 0 + 74645514 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=600.000000 s hg38.chr17_GL383563v3_alt 317280 1 + 375691 C s panTro4.chr17 292907 1 + 82630442 C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175124 1 + 73212453 C i ponAbe2.chr17 C 0 C 0 s chlSab2.chr16 182729 1 + 75148670 C i chlSab2.chr16 T 45 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762968 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e papAnu2.chr16 202820 0 + 74645514 C e rheMac3.chr16 210247 0 + 80904711 C e macFas5.chr16 218736 37 + 80997621 T e nomLeu3.chr19 284567 129 - 81552678 I a score=55332.000000 s hg38.chr17_GL383563v3_alt 317281 47 + 375691 GCACACCCTGCTGGGGCATGCCTGCTCCCCACCTGCACACACACCCC s panTro4.chr17 292908 47 + 82630442 ACACACCCTGCTGGGGCATGCATGCTCCCCACCTGCACACACACCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175125 47 + 73212453 GCACACCCTGCTGGGGCATGTGTGCTCCCCATCTGCACTCACACCCC i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 218699 45 + 80997621 ACACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGCACACACACC-- i macFas5.chr16 T 37 C 0 s papAnu2.chr16 202820 46 + 74645514 -CACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGCACACACACACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 182730 47 + 75148670 ACACACCCTGCTGGGGCATGCGTGCTCCCCGTCTGCACACACACACA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15762968 0 - 61074082 C e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 210247 0 + 80904711 C e nomLeu3.chr19 284567 129 - 81552678 I a score=689688.000000 s hg38.chr17_GL383563v3_alt 317328 344 + 375691 GACTTTGCACTGTAAGGACAAATGGGATGCCAGTGGGCTCT-GAGTCTCGAAGACCGGGACATAAGGGAAACACAAAATGTCACATG--GGGGAGGTGAAAGGTTTGTCTGTCAATGATCAATtaggagaaccacc----attgagggc--ttac-catttgcaaggtttagttccaagtgc-ttatggaatcatctcctttatctttcaaagtaaccctatg---aggcaggttttaacaaccccatt---------------gtacaggtgagcaaac----tgaggctcagag-aggtaaatgaca-gctggtaagcgacaaaggcccaggatttgaactc-caagcataagctcttaaccacaagcatagtCCAAC s panTro4.chr17 292955 345 + 82630442 GACTTTGCACTGTAAGGACAAATGGGATGCCAGTGGGCTCT-GAGTCTCGAAGACCAGGACATAAGGGAAACACAAAATGTCACATG--GGGGAGGTGAAAGGTTTGTCTGTCAATGATCAGTtaggagaaccacc----attgtgggc--ttac-catttgcaaggtttagtgccaagtgctttatggaatcatctcctttatctttcaaagtaaccctatg---aggcaggttttaacaaccccatt---------------gtacaggtgagcaaac----tgaggctcagag-aggtaaatgaca-gctggtaagtgacaaaggcccaggatttgaactc-caagcataagctcttaaccacaagcatagtCCAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175172 345 + 73212453 AACTGTGCACCGTAAGGACAAATGGGATGCTAGTTGGCTCT-GAGTCTCAAAGACCAGGACATAAGCGAAACACAAAATGTCACACA--GGGGAGGTGAAAGGTTTGTCTGTCAATGATCAATtaggagaaccacc----attgagggc--ttac-catttgccaggtttagtgccaagtgctttatggaatcatctcctttatctttcaaagtaaccctatg---aggcaggttttaacaaccccatt---------------ctacaggtgagcgaac----tgaggctcagag-aggtgaatgaca-gctggtaagtgacaaaggcccaggatttgaaccc-caagcataagctcttcaccacaagcgcagtccaat i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 210247 345 + 80904711 GACTTTGCACTGTAAGGACAAATGGGATGCTAGTGGGCTCT-GAGTCTCAAAGACCAGGACATAAGGGAAACACAAAATGTCACGTG--GGGGAGGTGAAAGGTTTGTCTGTCAATGATCAATtaggagaaccacc----attgagggc--ttac-catttgccaggcttagtgccaagtgctttatggaatcatgtcctttatctttcaaagtaaccctgtg---aggcaggttttaacacccccatt---------------gtacaggtgagcaaac----tgaggctcagag-aggtgaatgaca-gctggtaagtgacaaaggtccaggatttgaactc-caagcataagctcttaaccacaagcgtagtccaac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 218744 345 + 80997621 GACTTTGCACTGTAAGGACAAATGGGATGCTAGTGGGCTCT-GAGTCTCAAAGACCAGGACATGAGGGAAACACAAAATGTCACGTG--GGGGAGGTGAAAGGTTTGTCTGTCAATGATCAATtaggagaaccacc----attgagggc--ttac-catttgccaggcttagtgccaagtgctttatggaatcatgtcctttatctttcaaagtaaccctgtg---aggcaggttttaacacccccatt---------------gtacaggtgagcaaac----tgaggctcagag-aggtgaatgaca-gctggtaagtgacaaaggtccaggatttgaactc-caagcataagctcttaaccacaagcgtagtccaac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 202866 349 + 74645514 GACTTTGCACTGTAAGGACAAATGGGATGCTAGTGGGCTCT-GAGTCTCAAAGACCAGGACATAAGGGAAACACAAAATGTCACATGGCGGGGAGGTGAAAGGTTTGTCTGTCAATGATCAATTAGGAGAACCACC----ATTGAGGGCTTTTAC-CATTTGCCAGGCTTAGTGCCAAGTGCTTTATGGAATCATGTCCTTTATCTTTCAGAGTAACCCTGTG---AGGCAGGTTTTAACACCCCCATT---------------GTACaggtgagcaaac----tgaggctcagag-aggtgaatgACA-GCTGGTAAGTGACAAAGGTCCAGGATTTGAACTC-CAAGCATAAGCTCTTAACCACAAGCGTAGTCCAAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 182777 345 + 75148670 GACTTTGCACTGTAAGGACAAATGGGATGCTAGTGGGCTCT-GAGTCTCAAAGACCAGGACATAAGGGAAACACAAAATGTCACATG--GAGGAGGTGAAAGGTTTGTCTGTCAATAATCAATtaggagaaccacc----attgagggc--ttgc-catttgccaggcttagtgccaagtgctttatggaatcatctcctttatctttccaagtaaccctatg---aggcaggttttaacacccccatt---------------gtacaggtgagcaaac----tgaggctccgag-aggtgaatgaca-gctggtaagtgacaaaggtccagcatgtgaactc-caagcataaactcttaaccacaagcgtagtccaac i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15762968 360 - 61074082 -----------GTAAAGAT-AATGGAATTCTAGTGTGTTCTGGGGTCTCAAAGACTAGGACACAAGAGAAATACAAAGTGTCACACA-----GAAGTAAAAGGTATGCATGTTAATTATCTATTAGAagaaccaccatttattgagtgt--ttacttatttgtcaagcttggtgccaagtgctttagagaatcgtttccttcatttttcaTtgtatgtatgtatgtatgtatgtatttatttatttatttatgaatgAAAGCAAGCATGTGTGTGCACACACATTGAGGGTAGGGGcaagcagattccatgctgagcacggagtctgacttggggctcgatcccacaaccctgagatcatgacc-tgagcctaaatcaac i canFam3.chr9 C 0 I 223 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I a score=684109.000000 s hg38.chr17_GL383563v3_alt 317672 421 + 375691 TTCTCAACACTTCATAGTACTCTTTGCTAGACAGAACTATGTGTGTTTGGGGCCTTTTCCCGTCCCAGTtgtgttagtccgttttcacgctgctgataaggcatacccaagactgggcaatttacaaaagaaagaggtttaatggactt-acagttccacgtggctggggaagcctcacaatcatggtggaaggcaaggaggagcaagtcacgtcttacataaacggcagcaggcaaagagagagcttgtgcaggaaaactcccccttacagaaccatcagctctcgtgagacttattcactctcatgagaacagcacgggaaagacccgcccccatgattcaatgacct-ccaccgggtctctcccacaacaggtgggaatgcaagatgagatttgggtggggacacagccaaaccatatca s panTro4.chr17 293300 421 + 82630442 TTCTCAACACTTCATAGTACTCTTTGCTAGACAGAACTATGTGTGTTTGGGGCCTTTTCCCGTCCCAGTtgtgttagtccgttttcacgctgctgataaggcatacccgagactgggcaatttacaaaagaaagaggtttaatggactt-acagttccacgtggctggggaagcctcacaatcatggtggaaggcaaggaggagcaagtcacgtcttacataaacagcagcaggcaaagaaagagcttgtgcaggaaaactcccccttacagaaccatcagctctcgtgagacttattcactatcatgagaacagcacgggaaagacccgcccccatgattcaatgacct-ccacggggtctctcccacaacaggtgggaatgcaagatgagatttgggtgggcacacagccaaaccatatca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175517 419 + 73212453 ttctcaatacttcatagtacTCTTTGCTAGACAGAACTATGTGTGTTTGGGGCCTTTTCCCATCCCAGTtgtgttagtccattttcatgctgctgataaggcatacctgagactgggcaatttacaaaagaaagaggtttaatggacttaacagttccacgtggctggggaagtctcacaatcatggtggaaggcaaggaggagcaagtcacgtcttacataaatagca----gcaaagagaaagcttgtgcaggaaaattccccctcatagaaccatcagctctcgtgagacttattcactgtcacgagaacagcacgggaaagacctgcccccatgattcaattacctcccacggggtctctcccacaacacgtgggaatgcaagatgaggtttgggtggggacacagccaaaccatatca i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 210592 404 + 80904711 ttctc-acacttcatggtactCTGTGCTGGACAGAACTATGTGTGTTTGGGGCCTTTCCCCATCGCAGTtgtattagtccgtt----------------ggcctacctgagactgggcaatttaccaaagaaagaggtttaatggactt-acagttccacgtggctggggaagcctcacaaccacggcggaagacaaggaggagcaagtcacatcttacgtggatggcggcaggaaaagagggagcttgtgcagggaaattcccccc-atagaaccattggctctcatgagacttactcactatcacgagaacagcacgggaaagacctgcccccgtgattcaatgacctcccaccgggttcctcccacaacaggtgggagtgcaagacaagatttgggtggggacacagccgcaccatttcG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 219089 404 + 80997621 ttctc-acacttcatggtactCTGTGCTGGACAGAACTATGTGTGTTTGGGGCCTTTCCCCATCGCAGTtgtattagtccgtt----------------ggcctacctgagactgggcaatttaccaaagaaagaggtttaatggactt-acagttccacgtggctggggaagcctcacaaccacggtggaagacaaggaggagcaagtcacatcttacgtggatggcggcaggaaaagagggagcttgtgcagggaaattcccccc-atagaaccattggctctcatgagacttactcactatcacgagaacagcacgggaaagacctgcccccgtgattcaatgacctcccaccgggttcctcccacaacaggtgggagtgcaagacgagatttgggtggggacacagccgcaccatttcG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 203215 401 + 74645514 TTCTC-ACACTTCATGGTACTCTGTGCTGGACAGAACTATGTGTGTTTGGGGCCTTTCCCCGTCGCAGTTGTATTAGTCCGTT----------------Ggcctacccgagactgggcaatttaccagagaaagaggtttaatggactt-acagttccacgtggctggggaagcctcacaaccACGGTGGAAgacaaggaagagcaagtcacatcttacgtggatggcggCAGGAAAAGagggagcttgtgcagggaaattcccccCTATAGAACCATCggctctcgtgagactt----actatcacgagaacagcacgggaaagacctgcccccgtgattcaatgacctcccaccgggtccctcccacaacaggtgggagtGCAAggcgagatttgggtggggacacagccgcACCATTTCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 183122 420 + 75148670 ttctc-acactccatggtactCTGTGCTGGACAGAACTATGTGTGTGGGGGGCCTTTCCCCGTCGCAGCtgtattagtccgtcttcacgctgctgctaaggcctacccgagactgggcaatttaccaaagaaagaggtttaatggactt-acagttccacgtggctggggaagcctcacaaccatggtgcaagacaaggaggagcaagtcacatctta-gtggatggcagcaggaaaagagggagctcgtgcagggaaattcccccctagagaaccatcagctctcgtgagacttactcactatcacgagaacagcacgggaaacgcctgcccccgtgattcaatgacctcccaccgggtccctcccacaacaggtgggagtgcaagatgagatttgggtggggacacagccgcaccatttca i chlSab2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15763328 223 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I a score=578605.000000 s hg38.chr17_GL383563v3_alt 318093 278 + 375691 TCAGTCA-TCCCATGTACGCACATAATCTTTTTTCCTTCTCCTTTCAGATAAGTCAGAGACAATAaataagattataaatagaaaaacactattttgtaaaatataagaaaacaaac----------------------aacagacacttcact---gaagatatacaaatggcaaaca--agccaatgaaaagatgtccaacatgatatgtaattagggaattgcaaattaa---aacaacaagatactactacacacctgttagaacagcccagatccaaaacactgacaacaccaaatgctagtga s panTro4.chr17 293721 278 + 82630442 TCAGTCA-TCCCGTGTACGCACATAATCTTTTTTCCTTCTCCTTTCAGATAAGTCAGAGACAATAaataagattataaatagaaaaacactcttttgtaaaaaataagaaaacaaac----------------------aacagacacttcact---gaagatatacaaatggcaacca--agccaatgaaaagatgtccaacatgatacgtaattagggaattgcaaattaa---aacaacaagatactactacacacctgttagaacagcccagatccaaaacactgacaacaccaaatgctagtga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 175936 278 + 73212453 TCAGTCA-TCCCGTGTACACACATCATCTTTTTTCCTTCTCCTTTCAGATAAGTCAGAGACAATAaataagattctaaatagaaaaacgctattttgtaaaaaataagaaaacaaac----------------------aacagacgcttcact---gaagatatacaaatggcaaaca--agccaatgaaaagatgtccaacatgatatgtaattagggaattgcaaattaa---aacaacaagatactactacacacctgttagaacagcccagatccgaaacactgacaacaccaaatgctggtga i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 210996 274 + 80904711 T-AGCCA-TCCCGTGTACACACATCATCTTTTTTCCTTCTCCTTTCAGATAAGTCAGAGAcaacagataagattctaaatagaaaaacactattttgtcaaaaataagaaaacaaac----------------------aacagatacttcact---gaagatatacaaatggcaaaca--agccaatgaaaagatgcccaacatgatatgtaattagggaattgcaaattaa------aacaagatactactacacacctattagaacagcccagattcgaaacactgacatcaccaaatgctggtga i rheMac3.chr16 C 0 I 1876 s macFas5.chr16 219493 274 + 80997621 T-AGCCA-TCCCGTGTACACACATCATCTTTTTTCCTTCTCCTTTCAGATAAGTCAGAGAcaacagataagattctaaatagaaaaacactattttgtcaaaaataagaaaacaaac----------------------aacagatacttcact---gaagatatacaaatggcaaaca--agccaatgaaaagatgcccaacatgatatgtaattagggaattgcaaattaa------aacaagatactactacacacctattagaacagcccagattcgaaacactgacatcaccaaatgctggtga i macFas5.chr16 C 0 I 25 s papAnu2.chr16 203616 274 + 74645514 T-AGCCA-TCCCATGTACACACatcatcttttttccttctcctttcagATAAGTCAGAGACAATAGCTAAGATTCTAAATAGAAAAACActattttgtcaaaaataagaaaacaaac----------------------aacagataCTTCact---gaagatatacaaatggcaaaca--agccaatgaaaagatgcccaacatgATATGTAATTAGGgaattggaaattaa------aacaagatactaCTACACATCTGTTAGAACAGCCCAGATTTGAAACACTGACATCACCAAATGCTGGTGA i papAnu2.chr16 C 0 I 50 s chlSab2.chr16 183542 274 + 75148670 T-AGCCA-TCCCGTGTACACACATAATCTTTTTTCCTTCTCCTTTCAGATAAGTCAGAGACAACAGAtaagattctacatagaaaaacactatttcgtcaaaaataagaaaacaaac----------------------aacagacacttccct---gaagatatacaaatggcaaaca--agccaatgaaaagatgcccaacatgatatgtaattaggtaattggaaattaa------aacaagatactactacacacctattagaacagcccagattcgaaacactgacatcaccaaatgctggtga i chlSab2.chr16 C 0 I 1233 s canFam3.chr9 15763551 307 - 61074082 TCAATCACCCCCACATACACACACAATCTTTTTTCTTTATCCTTTCAGATAAACCAGAGACAATGAGTAAGACTCCAAATGGGGGAACACTGTTTTTTCaaacataaacaacccagttaaagaatgggcaaaagatctgaacagacaccttatcaaagaagacacacaaatggcaaatattagcataaggaaagatactcaacat--catgtccttaaagaatcacaaattaaggtaacaatgagatactactacacacctattagaatggccaaaatccagaacactgacaacaccaaatgctgacaa i canFam3.chr9 I 223 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e nomLeu3.chr19 284567 129 - 81552678 I a score=20620.000000 s hg38.chr17_GL383563v3_alt 318371 18 + 375691 ggatgtgcggcaacagga s panTro4.chr17 293999 18 + 82630442 ggatgtgcggcaacagga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 176214 18 + 73212453 ggatctgcggcaacagga i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 219792 18 + 80997621 ggatgtgcggcaacagga i macFas5.chr16 I 25 C 0 s papAnu2.chr16 203940 18 + 74645514 ggatgtgcgGCAACAGGA i papAnu2.chr16 I 50 C 0 s canFam3.chr9 15763858 18 - 61074082 gggtgcagagcaacagaa i canFam3.chr9 C 0 I 209 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e nomLeu3.chr19 284567 129 - 81552678 I a score=64192.000000 s hg38.chr17_GL383563v3_alt 318389 111 + 375691 acctc--aaacactgtaaaatggcccagcc----------------------------------------------------ggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggaggat--cacgaggtcaggagatcgagac s panTro4.chr17 294017 111 + 82630442 acctc--aaacactgtaaaatggcccagcc----------------------------------------------------ggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggaggat--cacgaggtcaggagatcgagac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 176232 111 + 73212453 acctc--aaacactgtaaaacggcacagcc----------------------------------------------------ggctgcgagcggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggaggat--catgaggtcaggagatcgagac i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 219810 167 + 80997621 acccccaaaacactgcAAAACAGCACAGccaacccgggcagcacagtgggactctgtatctatgaaaaataaaaacatgtttagccaggcgtgagggcacatgcccacagtcccagctcctcgggaggctgagatgggaggatggcttgagccctggacctcgaggc i macFas5.chr16 C 0 I 36 s papAnu2.chr16 203958 167 + 74645514 ACCCCCAAAACATTGCAAAACAGCACAGCCAACTCGGGCAGCACAGTGGGACTCTGtatccatgaaaaataaaaacatgtttagcCAGGAGTGAGGGCACATGCCcacagtcccagctcctcgggaggctgagatgggaggacggcttgagccctgGAGCTCGAGGC i papAnu2.chr16 C 0 I 722 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15763876 209 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e nomLeu3.chr19 284567 129 - 81552678 I a score=20502.000000 s hg38.chr17_GL383563v3_alt 318500 57 + 375691 catcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccag s panTro4.chr17 294128 57 + 82630442 catcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaattagccag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 176343 57 + 73212453 catcccggctaacacagtgaaaccccatctctactaaaaatacaaaaaaatagccgg i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 220013 54 + 80997621 cagcctgggtgacagagcaagactccgt---tacaaaaaaaaaaaaaaaaaaaCCAg i macFas5.chr16 I 36 I 2387 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15763876 209 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e papAnu2.chr16 204125 722 + 74645514 I e rheMac3.chr16 211270 1876 + 80904711 I e nomLeu3.chr19 284567 129 - 81552678 I a score=34976.000000 s hg38.chr17_GL383563v3_alt 318557 136 + 375691 gcatggtggcaggcacctgtagtcccagctattcaggaggctgaggcaggagaatggcgtgaacccgggaggcagaggttgcagtgagccaggatcgtgccactgtgctccagcctaggcaacagagcgagactcc s panTro4.chr17 294185 136 + 82630442 gcatggtggcgggcacctgtagtcccagctattcaggaggctgaggcaggagaatggcgtgaacctgggaggcagaagttgcagtgagccaagatcgtgccactgcgctccagcctgggcaacagagcgagactcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 176400 136 + 73212453 gcgtggtggcgggcacctgaagtcccagctacttgggaggctgaggcagcagaatggcgtgaacccgggaagcagaggttgcagtgagccaagattatgccactgcactccagcctgggcaacagagcgagactcc i ponAbe2.chr17 C 0 I 595 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15763876 209 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e papAnu2.chr16 204125 722 + 74645514 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I a score=19036.000000 s hg38.chr17_GL383563v3_alt 318693 216 + 375691 gtcccagattttaaaa-aaataaataaataaataaaaaTAAAGccaacctgggcagcacagtgggactctgtatctatgaaaaataaaaaattTTCAACAGGGAACCCTCAAGCACTGCAAAACAGTACAGccaacctgggtagcacagtgggactttgtatctatgaaaaataaaaacatgtttagccaggcgtgagggcacatgcccacagtccc s panTro4.chr17 294321 217 + 82630442 gtctcagaTTTAAaaataaataaataaataaataaaAATAAAGccaacctgggcagcacagtgggactccgtatctatgaaaaataaaaaattTTCAACAGGGAACCCTCAAGCACTGCAAAACAGTACAGCCAACCTGGGTAGCACAGTGGGACTTTGTATCTGTGAAAAATAAAAACATGTTCAGCCAGGCGTGAGGGCACACGTCCACAGTCCC i panTro4.chr17 C 0 M 787 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15763876 209 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e papAnu2.chr16 204125 722 + 74645514 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 176536 595 + 73212453 I a score=0.000000 s hg38.chr17_GL383563v3_alt 318909 121 + 375691 agctcctcgagaggctgagatgggaggatggcttgagccccagagctcagggtggcagggagccgtgactgtacaaccacactccagcctgggtgacagagcaagactctgttcaaaaaaa e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15763876 209 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e papAnu2.chr16 204125 722 + 74645514 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 176536 595 + 73212453 I e panTro4.chr17 294538 787 + 82630442 M a score=1499.000000 s hg38.chr17_GL383563v3_alt 319030 36 + 375691 aaaCCAgcccagccactttggaaggtagtttgttac s canFam3.chr9 15764085 36 - 61074082 aaaactgttcagttactttggaaggctgtatttttc i canFam3.chr9 I 209 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e papAnu2.chr16 204125 722 + 74645514 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I e ponAbe2.chr17 176536 595 + 73212453 I e panTro4.chr17 294538 787 + 82630442 M a score=33546.000000 s hg38.chr17_GL383563v3_alt 319066 240 + 375691 -aaagttgactatactcttaccaaaggatccagcaatcacattccttggtatatgcaaatgaactgaacatttatgcaaataaactgaacagttatctctattcaagaaccggcacactcatgttgactaaatatttattcataattg-caaaaacttggacacaaccaagatgtccttcatcaggtga----ataaacaaaatatggtaccatatattcatacgatggaacagaattcagtgata s ponAbe2.chr17 177131 240 + 73212453 -aaagtggactatactgttaccaaaggatccagcaatcgcattccttggtatatgcaaatgaactgaacatttatgcaaataaactgaacagttttctttattcaagaaccggcacactcatgttgactaaatatttattcataattg-caaaaacttggaagcaacaaagatgtccttcatcaggtga----ataaacaaaatatggtaccatatattcatatgatggaacataactcagcgata i ponAbe2.chr17 I 595 C 0 s canFam3.chr9 15764121 215 - 61074082 aaaacttaaatatactcttaccacgtgatccagcaattatactcctttgt-------------------atttacccaaagaaa-tgaaaacttatatccacacacaaaatggcattctaatgtttatacccattttattcattattgccaaaaacctaggagcaaccaaga------tcaacaggtgaatggataaataaactgtggtac-----atccagacagtggaataaaattcattaata i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e papAnu2.chr16 204125 722 + 74645514 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 294538 787 + 82630442 M a score=2172.000000 s hg38.chr17_GL383563v3_alt 319306 13 + 375691 aaaaaaat-----gagct s ponAbe2.chr17 177371 12 + 73212453 aaaaaa-t-----gagct i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 204847 18 + 74645514 aaaaaaatacaaaaaact i papAnu2.chr16 I 722 C 0 s canFam3.chr9 15764336 10 - 61074082 ---aaaat-----gagct i canFam3.chr9 C 0 I 43 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 294538 787 + 82630442 M a score=-134.000000 s hg38.chr17_GL383563v3_alt 319319 5 + 375691 agtaa s ponAbe2.chr17 177383 5 + 73212453 agtaa i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 204865 2 + 74645514 ag--- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15764346 43 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I e panTro4.chr17 294538 787 + 82630442 M a score=11547.000000 s hg38.chr17_GL383563v3_alt 319324 28 + 375691 ggctgggcaggatggctcatgcctgtaa s panTro4.chr17 295325 28 + 82630442 ggctgggcaggatggctcatgcctgtaa i panTro4.chr17 M 787 C 0 s ponAbe2.chr17 177388 28 + 73212453 ggctgggcaggatggctcatgcctgtaa i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 204867 26 + 74645514 --ccgggcgaggtggcgggcgcctgtag i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15764346 43 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e nomLeu3.chr19 284567 129 - 81552678 I a score=34521.000000 s hg38.chr17_GL383563v3_alt 319352 49 + 375691 tcccagcattttaggagaccgaggtggaaggattacttgaggctaggag s panTro4.chr17 295353 49 + 82630442 tcccagcattttaggagaccgaggtggaaggattacttgaggctaggag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 177416 49 + 73212453 tcccagcattttaggagaccgaggtggaaggattacttgaggctaggag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284696 49 - 81552678 tccccgcattttaggaggccaaggtggaaggattacttgaggctagggg i nomLeu3.chr19 I 129 C 0 s papAnu2.chr16 204893 49 + 74645514 tcccagctactcgggaggctgaggcaggagaatggcgtgaacctgggag i papAnu2.chr16 C 0 I 39 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15764346 43 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I a score=3010.000000 s hg38.chr17_GL383563v3_alt 319401 8 + 375691 ttcaaggc s panTro4.chr17 295402 8 + 82630442 ttcaaggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 177465 8 + 73212453 ttcaagag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284745 8 - 81552678 tccaagac i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15764346 43 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e papAnu2.chr16 204942 39 + 74645514 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I a score=95059.000000 s hg38.chr17_GL383563v3_alt 319409 139 + 375691 cagcctgagcaaaatagtgaaatcccatctctaccaaaaaaaaaaaaa-------attaAATTAATTAAAAGAAAAatgaggctactctgggcaccctgcctatggggcaacccttctctgcaaggagcagttaAAAAAAAAAAAA--- s panTro4.chr17 295410 138 + 82630442 cagcctgagcaaaatagtgaaatcccatctctaccaaaaaaaaaaaaa--------ttaAATTAATTAAAAGAAAAAtgaggctactctgggcaccctgcctatggggtaacccttctctgcaaggagcagtTAAAaaaaaaaaag--- i panTro4.chr17 C 0 I 48 s ponAbe2.chr17 177473 140 + 73212453 cagcctgagcaaaatagcaaaatcccgtctttaccaaaaaaaaaaaaa------aattaaattaattaaaagaaaaatgaggctactctgggcaccctgcctatggggtaacccttttctgcaaggagcagttaaaaaaaaaaaaa--- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284753 146 - 81552678 cagcctgagcaacatagcgaaatcccaactctacaaaaaattaattaattaattaatttaattaattaaAAGAAAAAtgaggctactctgggcaccctgcctatgggataatccttctctgcaaggagcaatttaaaaaaaaaaAa--- i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 204981 131 + 74645514 cagcctgggcgacagagtgagactctatctcaaaaaaaaaaaaaaaag------------------aaaaagaaaaatgaggctactctgggcacactgtcTATAGGGTAACCCTTCTCTGCAAGaagcagttaaaaaagaaaaaaaaa i papAnu2.chr16 I 39 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15764346 43 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I a score=5481.000000 s hg38.chr17_GL383563v3_alt 319548 12 + 375691 AAACAGAGCTGg s ponAbe2.chr17 177613 12 + 73212453 aaaaagagctgg i ponAbe2.chr17 C 0 I 41 s nomLeu3.chr19 284899 10 - 81552678 --aaagagctgg i nomLeu3.chr19 C 0 I 39 s papAnu2.chr16 205112 12 + 74645514 aaaaagagctgg i papAnu2.chr16 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15764346 43 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I e panTro4.chr17 295548 48 + 82630442 I a score=626.000000 s hg38.chr17_GL383563v3_alt 319560 2 + 375691 ca s panTro4.chr17 295596 2 + 82630442 ct i panTro4.chr17 I 48 C 0 s ponAbe2.chr17 177666 2 + 73212453 ct i ponAbe2.chr17 I 41 C 0 s nomLeu3.chr19 284948 2 - 81552678 ct i nomLeu3.chr19 I 39 C 0 s papAnu2.chr16 205124 2 + 74645514 ca i papAnu2.chr16 C 0 I 41 e mm10.chr11 75927878 6620 + 122082543 I e canFam3.chr9 15764346 43 - 61074082 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e chlSab2.chr16 183816 1233 + 75148670 I e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I a score=461332.000000 s hg38.chr17_GL383563v3_alt 319562 341 + 375691 aagggaaggaaaccagtctgaaagggctacttactgcagggttccaactacgtctatgacattctggaaaa-ggccaaactatggagacagtaaaaagaccagggatttgggcgtggaacaggaaggatgaggacatggattgcaggggattttgaaggcagcaaagccattattc---------------------------tccccacatgtcctta-cacattggttgaagtccacactacctacacctccaagatccaaccctaagtgtacactacacgttt-cagttaataataatgtatcagtattaccacatttattgtaacaaatgtacctcaccaaagcaagatgttaatcatgggaaattg s panTro4.chr17 295598 342 + 82630442 aagggaaggaaaccagtctgaaaggactacttactgcagggttccaactacgtctatgacattctggaaaa-ggccaaactatggagacagtaaaaagaccagggatttgggggtggaacaggaaggatgaggacatggattgcaggggattttgaaggcagcgaagccattattc---------------------------tccccacatgtccttaacacattggttgaagcccacactacctacacctccaagatccaaccctaagtgtacactacacgttt-cagttaataataatgtatcagtattaccacatttattgtaacaaatgcaccgcaccaaagcaagatgttaatcatgggaaattg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 177668 342 + 73212453 aagggaaggaaaccagtctgaaagggctacttacagcagggttccaactacatctatgacattctgaaaaagggccaaactatggagacagtaaaaagaccagggatttgggggtggaacaggaagaacaaggaaatggattgcaggggattttgaaggcagcgaagctattattc---------------------------tctccacatgtcctta-cacatcggttgaagcccatagtacctacacctccaagatcaaaccctaagtgtacactacacattt-cagttaataataatgtatcagtattaccacatttatagtaacaaatgtaccacaccaaagcaagatgttaatcatgggaaattg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 284950 341 - 81552678 aagggaagggaaccggtctcaaagggctacttactgcagggttccaacgatatctatgacattctgaaaaa-ggccaaactatggagacagtaaaaagaccagggatttgggggtggaacaggaagaacgaggacacagatttcaggggattctgaaggcagtgaagctattattc---------------------------tctccacgtgtcctta-cacattggttgaagcccatagaacctacacctccaagatcgaaccctaagtgtacactacacattt-cagttaataataacgtatcagtattaccacatttattgtaacaaatgtaccacaccaaagcaagatgttaatcatgggaaattg i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 205167 339 + 74645514 AAGAGAAGGAAACCAGTCTGAAAGGGCTACTTACTGCACGGTTCCAACTACGTCTATTACATTCTGAAAAA-TGCCAAACTACGGAGACAACAAAAAGACCAGGGATTTGGGGGTGGAACGGGAAGAACGAGGAAATGGATTGCAGGGGATTTGGAAGGCAGTGAAGTTATTATTC---------------------------TCTACACATGTCTTTA-CACATTTTTTGAAG-CGATAGAACCTACACCTCCAAGATAGAACCCTAAGTGTACACTATACATCT-tggttaataacaatgtatcagT-TTACCACGtttattgtaacaaatgtaccacaccaaAGCAAGATGTTAATCATGGGAAATTG i papAnu2.chr16 I 41 C 0 s chlSab2.chr16 185049 339 + 75148670 aagagaaggaaaccagtctgtaagggctacttacagcacggttccaacaacgtctattacattctgaaaaa-agccaaactatggagacaagaaaaagaccagggatttgggggtggaacgggaagaacgaggaaatggattgcaggggatttggaaggcagtgaagttattattc---------------------------tctacac--gtcttta-cacattttttgaagcccattgaacctacacctgcaagatagaaccctaagtgtacactatacatct-tggttaataataatgtatcagtattaccacgtttattgtaaccaatgtaccacaccaaagcaagatgttaatcataggaaattg i chlSab2.chr16 I 1233 C 0 s canFam3.chr9 15764389 345 - 61074082 aagtgaaagcagccaatctgaaaaggctacatactatatgagcccaa----gtctatgacattctggaaaa-ggtaaaactatggagtcaggtaaaagatcagaggtcctgggggagagagaaaatgatgaacaca-----------ggatttttacagccgtgaaactatcattctataagacacttgtaatggtggatacattcacatttgtcatta-tacatttgtcaaaacccaagataca-------ataaaagtgacccctaa-tgtaaattatggacttatagttaataattatgtagcaataccaactcgtcaact-caacaaatttaccacatcaacacaagaggttaatattgggaaattg i canFam3.chr9 I 43 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 211270 1876 + 80904711 I e macFas5.chr16 220067 2387 + 80997621 I a score=16985.000000 s hg38.chr17_GL383563v3_alt 319903 11 + 375691 aaagaggtaag s panTro4.chr17 295940 11 + 82630442 aaagaggtaag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 178010 11 + 73212453 aaagaggtaag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 285291 11 - 81552678 aaagaggtaac i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 222454 11 + 80997621 aaaaaaaaaaa i macFas5.chr16 I 2387 C 0 s papAnu2.chr16 205506 11 + 74645514 AAAGAGGTAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 185388 11 + 75148670 aaagaggtaaa i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15764734 11 - 61074082 ggggcagtaag i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C e rheMac3.chr16 211270 1876 + 80904711 I a score=445828.000000 s hg38.chr17_GL383563v3_alt 319914 200 + 375691 aggttagatgggaa--ctctgtactttttgttcaa--ttttttctgtaaacctaacactgttc-aagaaaaaaaaAAAAAAAAGTAAAGTGCTACCA-AATGCAAT-GAAAAAAATTTTAATTTTCTTCTTCATAGAGAAAACAAAAATAGCACACTA--ATGGTCATCAATGGGGAAGAATCTTGCCACGCCACTAAT---------ATTACATTTG s panTro4.chr17 295951 196 + 82630442 aggttagacgggaa--ctctgtactttttgttcaa--ttttttctgtaaacctaacactgttc-aagaaaaaaaaAAAA----GTAAAGTGCTACCA-AATGCAAT-GAAAAAATTTTTAATTTTCTTCTTCATAGAGAAAAAAAAAATAGCACACCA--ATGGTCATCAATGGGGAAGAATCTTGCCACGCCACTAAT---------ATTACATTTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 178021 194 + 73212453 aggttagacgggaa--ctctgtactttttg-tcaa--ttttttctgtaaacctaacactgttc-aagaaaaaaaaAAA-----GTAAAGTGCTACCA-AATGCAAT-GAAAAAATTTTTAATTTTCTTCTTCATAGAGAAAAAAAAAATAGCACACCA--ATCGTCATCAATGGGGAAGAATCTTGCCACGCCACTAAT---------ATTACATTTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 285302 191 - 81552678 aggttagatgggaa--ctctgtactttttgttcat--ttttttctgtaaacctaacactgttc-aagaaaaaaaa--------gtAAAGTGCTACCA-AATGCGAT-GAAAAAA-TTTTAATTTTCTTCTTCATAGAGAAAAAGAAAATACCACACCA--ATCGTCATCAATGAGGAAGAATCTTGCCACGCCGCTAAT---------ATTACATTTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 213146 189 + 80904711 aggttagacgggaa--ctctgtacttcttgttcaa-tttttttctgtaatcctaacactgttc-aaaaaaacaaa----------AAAGTGCTACCA-AATGCAAT-GAAAAAAATTTAAATTTTCTTCTTCATAGAGAAAA--AAAACACCACATCC--ATCATCATCAATGGGGAAGAATCTTGCCATGCCACTAAT---------ATTACCTTTG i rheMac3.chr16 I 1876 C 0 s macFas5.chr16 222465 189 + 80997621 aggttagacgggaa--ctctgtacttcttgttcaa-tttttttctgtaatcctaacactgttc-aaaaaaccaaa----------AAAGTGCTACCA-AATGCAAT-GGAAAAAATTTAAATTTTCTTCTTCATAGAGAAAA--AAAACACCACATCC--ATCATCATCAATGGGGAAGAATCTTGCCATGCCACTAAT---------ATTACCTTTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 205517 190 + 74645514 AGGTTAGACGGGAA--CTCTGTACTtcttgttcaa-tttttttctgtaattctaacactgttcaaaaaaaacaaa----------aaagtgctacca-aatgcaat-gaaaaaaatttaaattttcttcttcatagagaaaa--aaaacacCACATCC--ATCATCACCAATGGGGAAGAATCTTGCCATGCCACTAAT---------ATTACCTTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 185399 189 + 75148670 aggttagacgggaa--ctctgtacttcctgtttaa-tttttttctgtaatcctaacactgttc-aaaaaaacaaa----------AAAGTGCTACCA-AATGCAAT-GAAAAAATTTTAAATTTTCTTCTTCATAGAGAAAA--AAAATACCACATCC--ATCATCATCAACGGGGAAGAATCTTGCCATGCCACTAAT---------ATTACCTTTG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15764745 198 - 61074082 -ggatatgtgtgaaccctccataagtttcactcagttttttttctacaaacttaaaactgTGT--------TGAA--------GTCAAACACTACTATAATGCAATGGAAAAAAATTTTCATTTTCTTCTACAGAG-GAAAA--AAAATACTACACCCCAGTTGTCATTAATGGGAAAGAATCTTGCGATACTGCTAGTAGGATTAAAATTAAATTTG i canFam3.chr9 C 0 I 217 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C a score=246072.000000 s hg38.chr17_GL383563v3_alt 320114 103 + 375691 AGTGTTATACCCTCCCGAATGCTTTTGTGTGGACTAATCACAGGCGCCCATCATCCCTGTTTGCTAAAGGAGGAAGGTACGTACTGTCCATG-CCTGTGTT-CCA--------------- s panTro4.chr17 296147 103 + 82630442 AGTGTCATACCCTCCCGAATGCTTTTGTGTGGATTAATCACAGGCGCCCATCATCCCTGTTTGCTAAAGGAGGAAGGTACGTACTGTCCATG-CCTGTGTT-CCA--------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 178215 103 + 73212453 AGTGTCATACCCTCCCGAATGTTTTTGTGTGGATTAATCACCGGCGCTCATCATCCCTGTCTGCTAAAGGAGGAAGGTACGTACTGTCCATG-CCTGTGTT-CCA--------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 285493 103 - 81552678 AGTGTCATACCCTCCCGAATACTTTTGTGTGGATTAATCACAGGTGCTCATCATCCCTGTCTGCTAAAGGAGGAAGGTACGTACTGTCCATG-CCTGTGTT-CCA--------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 213335 104 + 80904711 GGTGTCACACCGTCCCGAACACTTTTGTGTGGATTAACCACAGGAGCTCGTCATCCCTGTTTGCCAAAGGAGGAAGGCACAGTACGTCCATG-CCTGTGTTCCCA--------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 222654 104 + 80997621 GGTGTCACACCGTCCCGAACGCTTTTGTGTGGATTAACCACAGGAGCTCGTCATCCCTGTTTGCCAAAGGAGGAAGGCACGTACTGTCCATG-CCTGTGTTCCCA--------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 205707 103 + 74645514 GGTGTCACACCGTCCCGAACGCTTTTGTGTGGATTAACCACAGGAGCTCGTCATCCCTGTTTGCCAAAGGAGGAAGGTACGTACTGTCCATG-CCTGTGTT-CCA--------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 185588 103 + 75148670 GGTGTCACACCGTCCCGAACGCTTTTGTGTGGATTAACCACAGGAGCTCGTCATCCCTGTTTGCTAAAGGAGGAAGGTACGTACTGTCCACG-CCTGTGTT-CCA--------------- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15765160 115 - 61074082 CATGTCAGACTCTTCAAAATGTTTTTGTGTCGGTTAATGATTTGA---TATCATCCCGGATCAC-AAACACGGGAAGCGCATACTGTTCATGCCCTTTATT-CCCCGACCATCTTCTGTG i canFam3.chr9 I 217 C 0 e mm10.chr11 75927878 6620 + 122082543 I e calJac3.chrUn_GL286409 1003218 0 - 1291538 C a score=326741.000000 s hg38.chr17_GL383563v3_alt 320217 106 + 375691 TCCCCACCACGTGG---CCCTCCCTTGGGAGTGCAGAACACTGAAAGGTCAACAAATACTGGGCCCCAGTTCTTT--CTTCACCACATGCATCACAGTTGGAATCTGTGTT-- s panTro4.chr17 296250 108 + 82630442 TCCCCACCACGTGG---CCCTCCCTTGGGAGTGCAGAACACTGAAAGGTCAACAAATACTGGGCCCCAGTTCTTTTTCTTCATCACAGGCATCACAGTTGGAATCTGTGTT-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 178318 108 + 73212453 TCCCCACCACGCGG---CCCTCCCTTGGGAGTGCAGAACACTGAAAGGTCAGCAAATACTGAGACCCGATTCTTTTTCTTCATCACATGCATCACAGTTGGAATCTGTGTT-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 285596 107 - 81552678 TCCCCACCACGCGG---CCCTCCCTTGGGAGTGCAGAACACTG-GAGGTCAGCAAATACGGGGCCCCAGTTCTTTTTCTTCATCACATGCATCACAGTTGGAATCTGTGTT-- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 213439 108 + 80904711 TCCCCACCACGCAG---CCCTCCCTTGGGACTGCACAACGTTGAAAGGTCAACAAATACTGGGCCCCAATTCTTATTCTTCATCACAGGCATCACAGCTGGAATCTGTGTT-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 222758 108 + 80997621 TCCCCACCACGCAG---CCCTCCCTTGGGACTGCACAACGTTGAAAGGTCAACAAATACTGGGCCCCAATTCTTATTCTTCATCACAGGCATCACAGCTGGAATCTGTGTT-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 205810 108 + 74645514 TCCCCACCACGCAG---CCCTCCCTTGGGAGTGCAGAATACTGAAAGGTCGACAAATACTGGGCCCCAATTCTTATTCTTCATCACAGGCATCACAGCTGGAAtctgtgtt-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 185691 108 + 75148670 TCCCCACCACGCAG---CCCTCCCTTGGGAGTGCAGAACGTTGAAAGGTCAACAAATACTGGGCCCCAATTCTTATCCTTCATCACAGGCATCACAGCTGGAATCTGTGTT-- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003218 107 - 1291538 TCCCCACCATGTGG---CCCTCCCTTGGGAGTGTGGAAGAGTGAATGGTCCACAAAGACTGGG-TCCAAttctttttcttcatcacatgcatcacagctggaatctgtgcc-- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15765275 109 - 61074082 TCCCTGCCACATGGGGACACAGCCT----ATTGCAGAAGACTGCAAGGGTGACAGATGCCAGCTCCCAATTCTCTTCCTTTACCACTTGTATCACAATTTGAATGTGCACATT i canFam3.chr9 C 0 C 0 e mm10.chr11 75927878 6620 + 122082543 I a score=727350.000000 s hg38.chr17_GL383563v3_alt 320323 244 + 375691 TATTTCTTTGTTTACGTGTTAATCTCTGGAAGGTGCACGGGGAGAAGGGTCACCTCCATTGTGCTGGCTCTGAAGAGCCACTGCATATTGCACAGTGCACGAGATGAATCCAAAATGAATCAGACAGCGGCTCCAATAAATG-CTGAGGCCATGCA-AAGAACACTGGGAGTGAAGAGAAGGCGCAGT----GAAGATCTTGCTCTGTGGCAGTCCTGGAGGGCTTCAA-------AGAGAAGAATGTGGTGCAGGG s panTro4.chr17 296358 244 + 82630442 TATTTCTTTGTTTACATGTTAATCTCTGGAAGGTGCACGGGGAGAAGGGTCACCTCCATTGTGCTGGCTCTGAAGAGCCAGTGCATATTGCACAGTGCATGAGATGAATCCAAAATGAATCAGACAGTGGCTCCAATAAATG-CTGAGGCCATGCA-AAGAACACTGGGAGTGAAGAGAAGGCACAGT----GAAGACCTTGCTCTGTGGCAGTCCTGGAGGGCTTCAA-------AGAGAAGAAAGTGGTGCAGGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 178426 244 + 73212453 TATTTCTTTGTTTACGTGTTAATCTCTGCAAGGTGCACGGGGAGAAGGGTCACCTCCATTGTGCTGGCTCTGAAGAGCCAGTGCATATTGCACAGTGCACGAGATGAATCCAAAATGAATCAGACAGTGGCTCCAATAAATG-CTGAGGCCATGCA-AAGAACACTGGGAGTGAAGAGAAGGCACAGT----GAAGATTTTGCTCTGCGGCAGTCCTGGAGGGCTTCAA-------AGAGAAGAATGTGGTGCAGGG i ponAbe2.chr17 C 0 I 160 s nomLeu3.chr19 285703 166 - 81552678 TGTTTCTTTGTTTACGTGTTAATATCTGGCAGGTGCA-AGGGAGAAGGGTCACCTCCACTG---TGGCTCTGA----------CAT-----------------------------------------------------------------ATGCA-AAGAACACTGGGAGCGAAGAGAAGGCGCAGT----GAAGATCCTGCTCTATGGCAGTCCTGGAGGGCTTCAA-------AGAGAAGAATGTGGTGCAGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 213547 244 + 80904711 TATTTCTTGGTTTACGTGTCAGTCTCTGGAAGGTGCACGGGGAGAAGGGTCACCTCCATTGTGCTGCCTCCAAAGAACCAGAGCGTACTGCACGGTGCACGAGATGAATCCCGAATGACTTGGACAGTGGCTCCAATAAATG-CTGGGGCCATGCA-AAGAACACCGGGAGCAAAGAGAAGGCGCAGG----GAAGATCTTGCTCTGTGGCAGTCCCGGGGGGCTTCAA-------AGAGAAGAACGTGGTGCAGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 222866 244 + 80997621 TATTTCTTGGTTTACGTGTCAATCTCTGGAAGGTGCACGGGGAGAAGGGTCACCTCCATTGTGCTGCCTCCAAAGAACCAGAGCGTACTGCACGGTGCACGAGATGAATCCCAAATGACTCGGACAGTGGCTCCAATAAATG-CTGGGGCCATGCA-AAGAACACCGGGAGCAAAGAGAAGGCGCAGG----GAAGATCTTGCTCTGTGGCAGTCCCGGGGGGCTTCAA-------AGAGAAGAACGTGGTGCAGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 205918 244 + 74645514 tatttctttgtttacgTGTCAATCTCTGGAAGGTGCACGGGGAGAAGGGTCACCTCTATTGTGCTGCCACCGAAGAACCAGTTCGTACTGTACGGTGCACGAGATGAATCCCGAACGACTCGGACAGTGGCTCCAATAAATG-CTGGGGCCAAGCA-AAGAACACCGGGAGCAAAGAGAAGGCGCAGG----GaagatcttgctctgtggcaGTCCCGGAGGGCTTCAA-------AGAGAAGAACGAGGTGCAGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 185799 244 + 75148670 TATTTCTTTGTTTACGTGTCAATCTCTGGAAGGTGCACGGGGAGAAGGGTCACCTCCATTGTGCTGCCTCCGAAGAACCAGTGCATACTGCACGGTGCACAAGATGAATCCTGAAGGACTCGGACAGTGGCTCCAATAAATG-CTGGGGCCATGCA-AAGAACACCGGGAGCAAAGAGAAGGCGCAGG----GAAGATCTTGCTCTGTGGCAGTCCCGGAGGGCTTCAA-------AGAGAAGAACGTGGTGCAGCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003325 229 - 1291538 tatttcttcatttgcttattagtctctggaaggttcagtgggagaagggccacttctgttgtgctggctctgaagagccagtgcacactgcacagtgcatgAGATGAATCC-AAATGAATCAGACGGTGGCCCCAGTGAACG-CCGGGGCCATACG-AAGAGCACTGGGAGTAGAGAGAAGGCG-AGT----GGAGAT------------CAGT-CTGGACGGCTTCCA-------AGAGGAGAGTGTGGTGCAGGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75934498 247 + 122082543 TATTTCTTTGCTTACTTGCTAATTTCCACAAGGT-CTCCGAGAGAAGGGTCACCTCTATTGTGTCCGCTCTGAACA-TTAGTATGTGTGCCAAGGAGCACGGGATGAGTCTGGAATGAACTAGACAATAATGTGGATAAATGCCTGGGGCTGTGTG-------GCCTAGGGCACAGGGAAGGCACAGTGACAGAAGACCCCACCCCGCTGCAGTCCCAG-GATCTACAAGGGGTggggaggaggaaggggaggagga i mm10.chr11 I 6620 I 5 s canFam3.chr9 15765384 239 - 61074082 TATTTCTTTGTT----TGTTAATCTCTGTAAGACCCTCTGGGAGTGGGGCCACCTCTGTTTTATTTGCTCTGAATACCCAGTGCAGACTGCAT-GTGAGTAGTATGAGTCCTGAGTGCATCCGACAATGACTCCAATAAATG-CTAGGGCCATTTATTGGAACAGTGAGAGCAAAGAGCTGGCACAGT----TAGAATTCCTCTCTGTGGCAATCTTGGAGGGCCTCAA--------GGGAGGAGTCTGCTGGAGAG i canFam3.chr9 C 0 C 0 a score=674205.000000 s hg38.chr17_GL383563v3_alt 320567 217 + 375691 CTCAGAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-GGCATTCCAGGGAGAGAA--------------------------------------------------------------------TGGTCCTCCCAGAAGTGCCACAAAGGAAGAGGAAACTCACT-------------------CAGAGAACTAGGGTAATTGGGCAGGAGAGAAACTCGCCTGGGCAGGTTAGTGACT-----------GC-----CCTGAGGTCA--CAGCTCGCTGGCACCAACT-TGGGCAGAG------CTGGGAACTCC--GA-AG-CTGTAGAAACA s panTro4.chr17 296602 217 + 82630442 CTCAGAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-GGCATTCCAGGGAGAGAA--------------------------------------------------------------------CTGTCCTCCCAGAAGTGGCACAAAGGAAGAGGAAACTCACT-------------------CAGAGAACTAGGGTAATTGGGCAGGAGGGAAACTCGCCTGGGCAGGTTAGTGACT-----------GC-----CCTGAGGTCA--CAGCTCGCTGGCACCAACT-TGGGCAGAG------CTGGGAACTCC--GA-AG-CTGTAGAAACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 178830 215 + 73212453 CTCAGAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-AGCATTCCAGGGAGAGAA--------------------------------------------------------------------CTGTCCTCCCAGAAGTGCCACAAAGGAAGAGGAAATTCACT-------------------CAGAGAACTAGGGTAGCTGGG--GGAGGGAGACTGGCCTGGGCAGGTTAGTGACT-----------GC-----CCTGAGGTCA--CAGCTCGCTGGCACCAACT-TGGGCAGAG------CTGGGAACTCC--GA-AG-CTGTAGAAACA i ponAbe2.chr17 I 160 C 0 s nomLeu3.chr19 285869 213 - 81552678 CTCAGAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-GGCATTCCAGGGAGAGAA--------------------------------------------------------------------CTGTCCTCTCAGAAGTGCCACAAAAGAAGAGGAA----ACT-------------------CAGAGAACTAGGGTATTTGGGCAGGAGGGAAACTCGCCTGGGCAGGTCAGTGACT-----------GC-----CCCGAGGTCA--CAGCTTGCTGGCACGAACT-TGGGCAGAG------CTGGGAACTCC--AA-AG-CTGTAGAAACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 213791 217 + 80904711 CTCAGAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-GGCATTCCAGGGAGAGAA--------------------------------------------------------------------CTGTCCTCCCAGAAGTGCCAGAAAGGAAGAGGAAACTCACT-------------------CAGGGAACGAGGGTAGCTGGGCGGGAGGGAAACTGGTCTGGGCAGGTTAGTGACT-----------GC-----CCTGAGGTCA--CAGCTCGCTGGCACCCTCT-TGGGCAGAG------CTAGGAGTGCT--GA-AG-CCGTAGAAATA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 223110 217 + 80997621 CTCAGAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-GACATTCCAGGGAGAGAA--------------------------------------------------------------------CTGTCCTCCCAGAAGTGCCAGAAAGGAAGAGGAAACTCACT-------------------CAGGGAACGAGGGTAGCTGGGCGGGAGGGAAACTGGTCTGGGCAGGTTAGTGACT-----------GC-----CCTGAGGTCA--CAGCTCGCTGGCACCCTCT-TGGGCAGAG------CTAGGAGTGCT--GA-AG-CCGTAGAAATA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 206162 217 + 74645514 CTCAGAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-CACATTTCAGGGAAAGAA--------------------------------------------------------------------CTGTCCTCCCAGAAGTgccagaaaggaagaggaaactcACT-------------------CAGGGAACTAGGGTAGCTGGGCGGGAGGCAAACTGGTCTGGGCAGGTTAGTGACT-----------GC-----CCTGAGGTCA--CAGCTCGCTGGCACCCTCT-TGGGCAGAG------CTAGGAGTGCC--GA-AG-CCGTAGAAATA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 186043 217 + 75148670 CTCAAAGGGAAAAGGAGGGACTTGGCAGGCAGA-----------AGGC-TGCATTCCAGGGAGAGAA--------------------------------------------------------------------CTGTCCTCCCAGAAGTGCCAGAAAGGAAGAGGAAACTCACT-------------------CAGGGAACTAGGGTAGCTGGGCGGGAGGGAAACTGGTCTGGGCAGGTTAGTGACT-----------GC-----CCTGATGTCA--CAGCTCGCTGGCACCATCT-TGGGCAGAG------CTAGGAGGGCT--GA-AG-CCGTAGAAATA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1003554 217 - 1291538 CTTCAGTGGAAAAGGAGGGACTTGGCAAGCAGA-----------CAGC-GGCATTCCAGGGAGAGAA--------------------------------------------------------------------CTATCCTCCCAGAAGCACCCAAAAGGAAGAGGAAGCTCACT-------------------CCAAGAACTAGGGTAGCTGGGCAGAAGGGAAACTGGCCTGGGCAGGTTAGCGACT-----------GC-----CCCAAGGTCA--CAGCCTGCTGGCACCAACT-TGGGCAGAG------CTGGGAACTCT--GA-AG-CTGTAGAAATA i calJac3.chrUn_GL286409 C 0 I 1655 s mm10.chr11 75934750 320 + 122082543 aggaagaggaagaggaggaagggaggaggaagaagaggaggaggaggg-agaagaagggggggagaagggCTTCCTTGAAGTGGAGGAGCCTGCTAGACATCTGGCAGTGGGCTGGCCTTCTCAGGGTCAGGTAGCTAGCCTTCCAGGGGCTGGAGGATGGTGGTTGGAGCTTGCTTGTGAGCCAGAAAGGGATGCAGAGAACTAGACTGGC-GGGCATGAGGAAAACCTGTT--GGCAGGGGAGTGTCT-----------GCACCAGCCTGAGTTCAC-CAGGCTCTTGGCACCAACTCTGGGCAGAG------CAGGGGCTCCA--GAGAG-CCATGAAAACA i mm10.chr11 I 5 C 0 s canFam3.chr9 15765623 223 - 61074082 CTGAAAGGAACAAGTAGGGACTTGGCAGGCATG-----------AGGCAGGCATTCCAGGAAGAGAG--------------------------------------------------------------------TCATCCTGCTAGAACTGCCAGAAAGGAAGAGG----CCTCT-------------------CTGAATTTTA--------GAGCTGGAAAGTAATTCAG------AAGATAGCTACTTAAGATCACAGGC-----ATTTAGGACACACAGCTCCCGGGCACCAACTCAGAGCAGATGAGATCCTGGGACCTCCCAGA-AGCCCATGAAAACA i canFam3.chr9 C 0 C 0 a score=586760.000000 s hg38.chr17_GL383563v3_alt 320784 188 + 375691 GCCAAGTGCAC-------CTTGAGCTTTCACTGAAGTCAGGCTGAG---AAGAGAGGAAAGTGA--ACACACCC------TCCCCATTTCACCCACATCTCCCAACATCCAGGGGCC-AGGAGCGTGCCCAGAAATTACCAGCTCAAACTCAAAACGGCTCTAAGGTTAAATGCACGTTCTATCCCACCACATAT-TGATTATTTCAA s panTro4.chr17 296819 188 + 82630442 GCCAAGTGCGC-------CTTGAGCTTTCACTGAAGTCAGGCTGAG---AAGAGAGGAAAGTGA--ACACACCC------TCCCCATTTCACCCACATCTCCCAACATCCAGGGGCC-AGGAGCGTGCCCAGAAATCACCAGCTCAAACTCAAAACGGCTCTAAGGTTAAATGCACGTTCTATCCCACCACATAT-TGATTATTTCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 179045 188 + 73212453 GCCAAGTGCAC-------CTTGAGCTTTCACTGAAGTCAGGCTGAG---AAGAGAGGAAAGTGA--AGAGACCG------TCCCCATTTCACCCACATCTCCCAACATCCAGGGGCC-AGGAGCATGCCCAGAAATCACCAGCTCAAACTCGAAACGGCTCTAAGGTTAAATGCACTTTCTATCCCACCATATAT-TGATTATTTCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 286082 188 - 81552678 GCCAAGTGCAC-------CTTGAGCTTTCACTGAAGTCAGGCTGAG---AAGAGAGGAAAGGGA--ACAGACCC------TCCCCATTTCACCCACATCTCCCAACATCCAGGGGCC-AGGAGCATGCCCAGAAATCACCGGCTCAAACTCGAAACGGCTCTAAGGTTAAATGCTCGTTCTATCCCACCATGTAT-TGATTATTTCGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 214008 194 + 80904711 GCCAAGTGCAC-------TTTGAGCTTTCACTGAAGTCAGGCTGAA---AAGAGAGGACAGTGA--ACAGACCCTCCCCTTCCCCAAGTCACCCACATCTCCCAACATCCAGGGACC-AGGAGCGTGCCCAGAAATCACCAGCCCAAACTCAAAACGGCTTTAAGGTTAAATTCACGTTCTATCCCACCATATAT-TGATGATTTTTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 223327 194 + 80997621 GCCAAGTGCAC-------TTTGAGCTTTCACTGAAGTCAGGCTGAA---AAGAGAGGACAGTGA--ACAGACCCTCCCCTTCCCCACGTCACCCACATCTCCCAACATCCAGGGACC-AGGAGCGTGCCCAGAAATCACCAGCCCAAACTCAAAACGGCTTTAAGGTTAAATTCACGTTCTATCCCACCATATAT-TGATGATTTTTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 206379 194 + 74645514 GCCAAGTGCAC-------GTCGAGCTTTCACTGAAGTCAGGCTGAA---AAGAGAGGACAGTGA--ACAGACCCTCCCCTTCCCCATGTCACCCACATCTCCCAACATCCAGGGGCC-AGGAGCGTGCCAAGAAATCACCAGCCCAAACTCAAAACGGCTTTAAGGTTAAATTCACATTCTATCCCACCATAtat-tgatgattttta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 186260 194 + 75148670 GCCAAGTGCAC-------CTCGAGCTTTCACTAAAGTCAGGCTGAA---AAGAGAGGACAGTGA--ACAGACCCTCCCCTTCCCCATGTCACCCATatctcccaacatccaggggcc-aggagtgtgcccagaaatcgccagcccaaactcaaaacggctttaaggtgaaattCACATTCTATCCCACCATATAT-CGATGATTTTTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1005426 191 - 1291538 GCAAAGTGCAC-------CTCCAGCTTTCACTGAAGTAAGGCTGAG---AA---AGGAAAGTGA--ACAGACCCTGCCCTTCCGCATTTCACCCACACCTCCGAACATCCAGGGGCC-AGGAGTATGTGTAGAAATCACCAGCCCAAACTCAAAATGGCTCTAAGGTTAAATTCACATTCTATCCCCACATATAA-TGATTATCTTAA i calJac3.chrUn_GL286409 I 1655 C 0 s mm10.chr11 75935070 181 + 122082543 -GCAAGGCTACCCCAACTCTCAAGCTTCTCCAGAAGTCAGGCTGCACGTAAGAGAAGAT---------------------GCAGCCTACCGTGCACTCTTTTCAACATCCAAGT-CA-AGGAGGGCGGCC--AAGGCACCAGCTCCATCAC-AAGCATCACAAAAGGCAAATGTCTACACCAATCCCTTAGACCTGGGattattttaa i mm10.chr11 C 0 C 0 s canFam3.chr9 15765846 191 - 61074082 ACAAAGTGTACCCtgattctcaggcttccacctaagtaaagctaaa---gatagaggaaagtgaacacagaccc------atcccctgtggccc------cctgccatccagggacaggggagtatggccagaaacagccagcccaaaggtgaaatatatctgatgtcaaatctccatgctaggcca-tatatct-taattattttaa i canFam3.chr9 C 0 C 0 a score=539993.000000 s hg38.chr17_GL383563v3_alt 320972 183 + 375691 AAATTAAAATga-------ctgggcaca-----gtggaccatgcctgtaatcccaacactttgggaggccaaggtgggaggattgcttgaggccag----------gagttcgagaccaacctgggcaatgtagcaagaccccatctctataaaaaaA-CTTTTTAATAAAAATAAATGTTAAAAAT----TAACTAATTAATTCAATTT s panTro4.chr17 297007 184 + 82630442 AAATTAAAATga-------ctgggcaca-----gtggaccatgcctgtaatcccaacactttgggaggccaaggtgggaggattgcttgaggccag----------gagttcgagaccaacctgggcaacgtagcaagaccccatctctataaaaaaAACtttttaataaaaataaatgttaaaaat----taactaattaattcaattt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 179233 183 + 73212453 AAATTAAAATga-------ctgggcaca-----gtggaccacgcctgtaatcccaacactttgggaggccaaggtggggggattgcttgaggccag----------gagttcgagaccaacctgggcaatgtagcaagaccccatctgtataaaaaaaaCTGtttaataaaaataagtgttaaaaat----t-actaattaattcaattt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 286270 184 - 81552678 AAATTAATATga-------ctgggcaca-----gtggaccaggcctgtaatcccaacactttgggaggccaaggtgggaggatcgcttgaggccag----------gagtccgagaccaacctgggcaacgtagcaagatcccatctgtataaaaaaaactttttaataaaaataagtgttaaaaat----taactaattaattcaattt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 214202 186 + 80904711 AAATTAAAATga-------ctgggcaca-----gtggaccacgcctgtaatcccaaccctttaggaggccaaagtgggaggattgcttgaggccag----------gagttcgagaccaacctgggcaatgtagcaagaccccatctgtat--aaaaaaCTTTTTAATAGAAATAAATGTTAAAAATGTACTGATTAATTAATTCAATTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 223521 186 + 80997621 AAATTAAAATga-------ctgggcaca-----gtggaccacgcctgtaatcccaaccctttaggaggccaaagtgggaggattgcttgaggccag----------gagttcgagaccaacctgggcaatgtagcaagaccccatctgtat--aaaaaaCTTTTTAATAGAAATAAATGTTAAAAATGTACTGATTAATTAATTCAATTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 206573 188 + 74645514 aaattaaaatga-------ctgggcaca-----gtggaccacgcctgtaatcccaacactttaggaggccaaagtgggaggattgcttgaggccag----------gagttcgagaccaacctgggcaatgtagcaagaccccatctgtataaaaaaaactttttaatagaaataaatgtttaaaatgtactaattaattaattcaattt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 186454 187 + 75148670 AAATTAAAATga-------ctgggcaca-----gtggaccacgcctgtaatcccaaccctttaggaggccaaagtgggaggattgcttgaggccag----------gagttcgagaccaacctgggcaatgtagcaagaccccatctgtataaaaaaAACTTTTTAATAGAAATAAATGTTAAAAATGTACTAATTAG-TAATTCAATTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1005617 188 - 1291538 AAATTAAAGTga-------ctgggcaca-----gtggaccacgcctctaatcccaactctttgggaggccgaggtgagaagattgcttgaggccag----------gaatttgagaccaacctgggcaacatagcaagaccctatctatataataaaTTCTTTTAAATAAAACTAAATGTTAAAAATTAACAAATTCATTAATTCAGTTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75935251 168 + 122082543 aaattaaaataatGCTTTTCCagccaaatggagggggcacaggcctttaatcccatcactccagt-ggcagaggcaggtggatctc-tgagtctggtctacagagtgagttctaggacagccagaactacacaatgaaaccctatctt-----gaaaaacca------------aaaTGATGATAAT----------------------- i mm10.chr11 C 0 C 0 e canFam3.chr9 15766037 0 - 61074082 C a score=878726.000000 s hg38.chr17_GL383563v3_alt 321155 304 + 375691 AATTAAAATAATGCTTCTCCTCCACCTTAAGACATA-ACCTTCCAAAAATGTCTTCCAGTAA------AATCGA-GTCCAGGATTATGC-AACTCTAGTTTTATGTAGTAATAGCAGCAGCAGCTGACATTTCTGTAACACCTTATCTATATCATCACTCAC--AATCTCCACTGCAATCCCATCGAGGGCCATCAGCACCCTGATATTACTGCTGTGCCCAGCACACCACAGGGACAGCACACACCCACACAGAGGAGCACAGAGGCCAATTAGATTCCTCCAAGTTAAATAGTGTGTCCACAGTCTCACTACT s panTro4.chr17 297191 304 + 82630442 aattaaaataatGCTTCTCCTCCACCTTAAGACATA-ACCTTCCAAAAATGTCTTCCAGTAA------AATCGA-GTCCAGGATTATGC-AACTCTAGTTTTATGTAGTAATAGCAGCAGCAGCTGACATTTCTGTAACACCTTCTCTATATCATCACTCAC--AATCTCCACTGCAATCCCATCAAGGGCCATCAGCACCCTGATATTACTGCTGTGCCCAGCACACCACAGGGACAGCACACACCCACACAGAGGAGCACAGAGGCCAATTAGATTCCTCCAAGTTAAATAGTGTGTCCACAGTCTCACTACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 179416 302 + 73212453 aattaaaataatGCTTCTCCTCCACCTTAAGACATA-ACCTTCCAAAAATGTCTTCCAGTAA------AATTGA-GTCCAGGATTGTGC-AACTCTAGTTTTATGTAGTAATAACAGCAGCAGCTGACATTTCTATAATGTCTTATCTATATCATCACTCAC--AATCTCCACTGCGGTCCCATCGAGGGCCATCAGCACCCCGATATTACAGATGCGCCTGGCACACCGCAGGGACAGCCCACACCCCCACAGAGGAGCACAGAGGCCAATTAGCTTCCTCCAAGTTAAACAGTGTGTC--CAGTCTCACTACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 286454 287 - 81552678 aattaaAATAATGCTTCTCCTCCACCTTAAGATATA-ACCTTCCAAAAATGTTCTCCAGTAA------AATCGA-GTCCAGGATTGTGC-AACTCTAGTTTTATGTAGTAATAGCAGCAGTCGCTGACATTTCTGTAACACCTTATCTATATCATCA--CAC--AATCTCCACCGCGATGCCATCGAGTGCCATCAGCACCCTGATATTACAGATGTGCCCAGCACACCGCAGGGACAGCCCATACCCACACAGAGGAGCACAGACGTCAATTAGCTTCCTCCAAGTTAAACAGTGTGTC--------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 214388 305 + 80904711 AATGAGAATAATGCTTCTTCTCCACCCTAAGAGATATTCCTTCCAAAAACGTCTTCCAGTAA------AATCGA-GTCCAGGATTCTGC-AACTCTGGTTTTATATAGTAATAGCAGCAGTAGCTGACATTTCTATAACACCTTGCCTATATCATCACTCAC--AATCTCCCCTGCAATCCCAGCGAGTGCCCTCAGCACCCCGATATTACAGATGTGCCCAGCACACTGCAGGGACAGCCCACATCCACACACACGAGCACAGAGGCCAATTAGCTTCCTCCAAGTTAAACAGCGTGTCCACAGCCTCACTACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 223707 305 + 80997621 AATGAGAATAATGCTTCTTCTCCACCCTAAGAGATATTCCTTCCAAAAACGTCTTCCAGTAA------AATCGA-GTCCAGGATTCTGC-AACTCTGGTTTTATATAGTAATAGCAGCAGTAGCTGACATTTCTATAACACCTTACCTATATCATCACTCAC--AATCTCCCCTGCAATCCCAGCGAGTGCCCTCAGCACCCCGATATTACAGATGTGCCCAGCACACTGCAGGGACAGCCCACATCCACACACACGAGCACAGAGGCCAATTAGCTTCCTCCAAGTTAAACAGCGTGTCCACAGCCTCACTACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 206761 305 + 74645514 aatgagaataatgCTTCTTCTCCACCCTAAGAGATATTCCTTCCAAAAATGTCTTCCAGTAA------AATCGA-GTCCAGGATTCTGC-AACTCTGGTTTTATATAGTAATAGCAGCAGTAGCTGACATTTCTATAACACCTTACCTATATCATCACTCAC--AATctcccctgcaatcccagcgagTGCCCTCAGCACCCCAATATTACAGATGTGCCCAGCACACTGCAGGGACagcccacacccacacacaggagCGCAGAGGCCAATTAGCTTCCTCCAAGTTAAACGGCGTGTCCACAGCCTCACTACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 186641 305 + 75148670 AATGAGAATGATGCTTCTGCTCCACCCTAAGAGATATCCCTTCCAAAAATGTCTTCCAGTAA------AATCGA-GTCCAGGATTCTGC-AACTCTGGTTTTATACAGTAACAGCAGCAGTAGCTGGCATttctataacaccttacctatatcatcactcac--aatctcccctgcaatcccagcgggtgccctcagcaccccgatattacagatgtgcccagcacactgcagggacagCCCACACCCACACACAGGCCCACAGAGGCCAATTAGCTTCCTCCAAGTTAAACAGCGTGTCCACAGCCTCACTACT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1005805 263 - 1291538 AATTAAAATAATGCTTCTCCTCCACC-----------CCCTTCCAAGAATGTCTTCCAGTAA------AATCGA-GTCCAGGATTGTGC-AACCCTAATTTTATGTAATAACAGCAGCAGTAGCTGACATTTCTGTAACACCTTATCTGTATCACAAGTCCC--AATCCCCGCTGCAATGCCATCGAGTTCCAGCAGCACCCCCATGTT-CAGATG---------------------------CACCCATACAGAGGAGCACAAACGGGA---TACTTCCTCTAAGGTAAAAGTTCTGTCCACAGTCTCACTGCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75935419 239 + 122082543 ------GATGATGCTGTTTTCCCATCCTAAGGTCCA---CTCCCAGAAATATCTTCCAGTCAGGCCTGAGTCGA-GCCCAG-----------------------------------------GCTGGCACCACCCTTATATTTTACCTACAGCACCAGTCA---AGTCAGCCCTCCAA---------------ACAGTTTCCACCTGGGACGGACA-GCCCTGCATCCTGCAGCAGCGGCCCCCACTTTCACAGAAGAACAGAA----CAATTTA--TGTTCCCAGGTAGAAGATTTGCCCATGGTCTGGCTACT i mm10.chr11 C 0 I 83 s canFam3.chr9 15766037 270 - 61074082 aattaaaacaatgtttttccctcaccctaagtgata-ctgtccccaaaaagtctcccagcaa------aattgatgttcAGAATCGCATAAACTCCAGTTTTATGTAATCACAGCAGCAGCAGCTAATATCTATACATGACCTTTGCTTTATCATAACTCACATAATCCCCACTGCAG-----------------------CCCATTTTACAGATGCACCCAGCACGCAGCAGGGGCCGCCCC---------------ACACAGACAGTGACTGGATTCTCTCAAGTTACAGATCTTGTCCCCAGTCACACTTCC i canFam3.chr9 C 0 C 0 a score=562105.000000 s hg38.chr17_GL383563v3_alt 321459 189 + 375691 GCAGATGCGATCTCCCTTTCAGAGgcgtaggtttgcaattggactctacagctaaccagcggtttaatttggggcttgttacatttccctacactccatttcttcctctgtacaacagaggtaataagtaatgcattcctcaacaggttttttccagagtgaattgtggtaacagagtaaaAGTTCCAg s panTro4.chr17 297495 189 + 82630442 GCAGATGCGATCTCCCTTTCAGAGgcgtaggtttgcaattggactctacagttaaccagcggtttaatttggggcttgttacatttccctacactccatttcttcctctgtacaacagaggtaataagtaatgcattcctcaacaggttttttccagagtgaattgtggtaacagagtaaaAGTTCCAg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 179718 189 + 73212453 GCAGACACGGTCTCCCTTtcagaggcgtaggtttgcaattggactctaaagctaaccagcggtttaatttggggcttgttacatttccctacactccatctcttcctctggacaacagaggtaataagtaatgcattcctcaacaggttttgtccagagtgaattgtggtaacagagtaaaagTTCCAg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 286741 188 - 81552678 -CACACGCAGTCTCCCTTGCAGaggcgtaggttcgcaattggactctacagctaaccagcggtttaatttggggcttgttacatttccctacactccatttcttcctctgtacaacagaggtaataaataatgcattcctcaacgggttttgtccatagcgaatcgtggtaacagagtaaaagTTCCAg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 214693 189 + 80904711 GCAGACACGGCCTTCTTTTCAGAGgcgtaagtttgcaattggactctacagctcaccagcggtttactttggggcttgttacacgtccctccactccatttcttcctctgtacgacagcagtaataaataatgcatttctcaacaggttttgtCCATAGTGAATTGTGGTAACCGAGTAAAAGTTCCAg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 224012 189 + 80997621 GCAGACACGGCCTTCTTTTCAGAGgcgtaagtttgcaattggactctacggctcaccagcggtttactttggggcttgttacacgtccctccactccatttcttcctctgtacaacagcagtaataaataatgcatttctcaacaggattTGTCCATAGTGAATTGTGGTAACCGAGTAAAAGTTCCAg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 207066 189 + 74645514 ACAGACACGGCCTTCTTTTCAGAGGCGTAAGTTTGCAATTGGACTGTACAGCTCACCAGCAGTTTACTTTGGGGCTTGTTACATGTCCCTCCActccatttcttcctctgtaCGACAGCAGTaataaataatgcatttctcaACAGGTTTTGTCCATAGTAAATTGTGGTAACCGAGTAAAagttccag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 186946 189 + 75148670 GCACACACGGCCTTCTTTTCAGAGgcgtaagtttgcaattggactctacagctcaccagtggtttactgtggggcttgttacatgtccctccactccatttctccctctgtacgacagaggtaataaataatgcatttctcaacaggttttgtCCATAGTGAATTGTGGTAACCGAGCAAAAGTTCCAg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1006068 188 - 1291538 ACAGACACAGTCTCGCTTTCAGAGGGGtaagtttgcaactggactccaaagctaagcagtggtataatttggggcttgttaaatttccctatacttc-tttcttcctttgcacaacagaagtaatgaataatgcattcctcaacaggttttgtccatagtgaattgtgataacagagtaaaagttccag i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15766307 162 - 61074082 ACAGACAACACC-----------AGCATATGCATGGAA--------TGCAGTTAactggctataaaatctggggccagctcaaattccccactcttc----cctccttcgtacaaaggagatga----tagtactttctgcaaccgtttttgtccgggaggaactctgattccaaagtcaaagttccag i canFam3.chr9 C 0 C 0 e mm10.chr11 75935658 83 + 122082543 I a score=94095.000000 s hg38.chr17_GL383563v3_alt 321648 31 + 375691 gctgggcgcggtggctcacgcctgtaatcct s panTro4.chr17 297684 31 + 82630442 gctgggcagggtggctcacgcctgtaatcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 179907 31 + 73212453 gctgggtgtggtggctcacgcctgtaatcct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 286929 31 - 81552678 gctgggtgcggtggctcacgcctgtaatcct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 214882 31 + 80904711 gctgggtgcggtggctcacgcctgtaatcct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 224201 31 + 80997621 gctgggtgcggtggctcacgcctgtaatcct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 207255 31 + 74645514 gctgggcgcgggggcttacgcctgtaatcct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 187135 31 + 75148670 gctgggcgcagtggctcacgcctgtaatcct i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1006256 31 - 1291538 gctgggcaaggtggctcacacctgtaatccc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75935658 83 + 122082543 I e canFam3.chr9 15766469 0 - 61074082 C a score=287149.000000 s hg38.chr17_GL383563v3_alt 321679 125 + 375691 agcactttgggaggctgaggcagacggatcacaacattgagaccagcctggccaacatagttaaacctcatctctactaaaaatacaaaaattaTctggacgtggtggcacgcacttgtaatcca s panTro4.chr17 297715 125 + 82630442 agcactttgggaggctgaggcagacagatcacaacattgagaccagcctggccaacatagttaaacctcatctctactaaaaatacaaaaattaTctgggcatggtggcacgcacctgtaatccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 179938 125 + 73212453 agcactttaggaggctgaggcgggtggatgacaacattgagaccagcctggccaacatagtgaaacttcatctctactaaaaatacaaaaattaTctgagcatggtggcgcacacctgtaatccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 286960 125 - 81552678 agcactttgggaggctgaggcgggcggatcacaacattgagaccagcctggccaacatagtgaaacctcatctctactaaaaatacaaaaattaTctgggcgtggtggcacgcacctgtaatccc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 214913 125 + 80904711 agcgcttcaggaggctgaggcgggcggatcacaagattgagaacagcctggccaacataatgaaaccccatctctactaaaaatacaaaaattaTccaggcatggtggctcacgcctgtaatccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 224232 125 + 80997621 agcgcttcaggaggctgaggcgggcggatcacaagattgagaccagcctggccaacataatgaaaccccatctctactaaaaatacaaaaattaTccgggcatggtggctcacgcctgtaatccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 207286 125 + 74645514 agcgcttcaggaggctgaggcgggcggatcacgagattgagaccagcctggccaacataatgaaaccccatctctactaaaaatacaaaaattatccgggcgcggtggctcacgcctgtaatcgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 187166 125 + 75148670 agcacttcaggaggctgaggcgggcggatcacgagattgagaccagcctggccaacataatgaaaccccatctctactaaaaatgcaaaaattaTccgggcgcggtggctcacgcctgtaatccc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75935658 83 + 122082543 I e canFam3.chr9 15766469 0 - 61074082 C e calJac3.chrUn_GL286409 1006287 0 - 1291538 C a score=394238.000000 s hg38.chr17_GL383563v3_alt 321804 137 + 375691 agcactttgggaggccgaggtgggcagatcatgaggtcaagagatcaagaccagcctggccaacatgggtgaaacaccatctccactaaaaatacaaaaattagctgggcatggtggtgcatgcctgtaatcccagc s panTro4.chr17 297840 137 + 82630442 agcactttgggaggccgaggtgggcagatcatgaggtcaagagatcaagaccagcctggccaacatgggtgaaacaccatctcctctaaaaatacaaaaattagctgggcatggtggtgcatgcctgtaatcccagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 180063 136 + 73212453 agcactttgggaggccaaggcaggcggatcatgaggtcaagagatcgagaccagcctggccaacat-ggtgaaaccccatctccactaaaaatacaaaaattagctgggcatggtggtgcatgcctgtcattccagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 287085 136 - 81552678 agcactttgggaggccgaggcaggcggatcatgaggtcaagagatcgagaccatcctggccaactt-ggtgaaaccccatctccactaaaaatacaaaaattagccgggcgtggtggtgcacacctgtaatcccagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 215038 136 + 80904711 agcactttgggaggccgaggtgggcggatcatgaggtcaagggatcgagaccatcctggccaacat-ggtgaaaccccatgtctactaaaaatacaaaaattagctgggcgtggtgatgtgtgcctgtaatcccagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 224357 136 + 80997621 agcactttgggaggccgaggtgggcggatcatgaggtcaagggatcgagaccatcctggccaacat-ggtgaaaccccatgtctactaaaaatacaaaaattagctgggcgtggtgatgtgtgcctgtaatcccagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 207411 136 + 74645514 agcactttggggggccgaggcaggtggatcatgaggtcaagagatcgagaccgtcctggccaacat-ggtgaaaccccatgtctactaaaaatacaaaaattagctgggcgtggtggtacgtgcctgtaatcccagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 187291 136 + 75148670 agcactttggggggccgaggtgggcggatcatgaggtcaagagatcgagaccatcctggccaacat-ggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagc i chlSab2.chr16 C 0 I 8559 s calJac3.chrUn_GL286409 1006287 136 - 1291538 agtgcttcgggaggccaaagcgggaagatcaccaggtcaagagatcgagaccatcctggccaacat-ggtaaaagcacgtctctactacaaatacaaaaattagctgggcatggtggcacacacctgtagtcccagc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75935658 83 + 122082543 I e canFam3.chr9 15766469 0 - 61074082 C a score=234628.000000 s hg38.chr17_GL383563v3_alt 321941 118 + 375691 tactcaggaggctgaggcaggggaatcgcttgaaccgaggaggcggaggttgcagtgagccgagatcgcaccagtgcactctag-ct-ggtgacagagcaagaccccatctcaaaaaaag s panTro4.chr17 297977 118 + 82630442 tactcaggaggctgaggcaggggaatcgcttgaaccgaggaggcggaggttgcagtgagccgagatcgcaccaatgcactctag-ct-ggtgacagagcaagaccccatctcaaaaaaag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 180199 118 + 73212453 tactcaggaggctgaggcaagggaatcgcttgaacccaggaggcggaggttgcagtgagctgagatcgcgtcactgcactctag-ct-ggcgacagagcaagaccccatctcaaaaaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 287221 115 - 81552678 tactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagcgagctgagatcgcgtcactgcactccagcct-ggtgacagagcaagaccccatctcaaaa---- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 215174 119 + 80904711 tcctgaggaggctgaggcaggggaatcacttaaacccagaaggcggaggttgtagtgagctgagttcgcgtcaccgcactccagcct-ggtgacatagcgagacaccatctcaaaaaaac i rheMac3.chr16 C 0 I 7 s macFas5.chr16 224493 119 + 80997621 tcctgaggaggctgaggcaggggaatcacttaaacccagaaggcggaggttgtagtgagctgagttcgcgtcactgcactccagcct-ggtgacatagcgagaccccatctcaaaacaac i macFas5.chr16 C 0 I 7 s papAnu2.chr16 207547 116 + 74645514 tcctgaggaggctgaggcaggggaatcacttaaacccaggaggcggaggttgcagtgagctgagttcgcgccactgcactccagcct-ggtgacatagcgagaccccatctcaaaaa--- i papAnu2.chr16 C 0 I 4 s calJac3.chrUn_GL286409 1006423 115 - 1291538 tacttgggaggctgaggcaggagaactgcttgaacccaggaggtgggggttgcagtgagccgagactgcaccactacactccagcctgggcgaca----gagattccgtctcaaaaaaa- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75935658 83 + 122082543 I e canFam3.chr9 15766469 0 - 61074082 C e chlSab2.chr16 187427 8559 + 75148670 I a score=44204.000000 s hg38.chr17_GL383563v3_alt 322059 15 + 375691 aaaaaaaaGTTCCAA s panTro4.chr17 298095 15 + 82630442 aaaaaaaaGTTCCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 180317 15 + 73212453 aaaaagaaGTTCCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 287336 15 - 81552678 aaaaaaaaGTTCCAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 215300 15 + 80904711 aaaaaaaaGTTCCAA i rheMac3.chr16 I 7 C 0 s macFas5.chr16 224619 15 + 80997621 aaaaaaaaGTTCCAA i macFas5.chr16 I 7 C 0 s papAnu2.chr16 207667 15 + 74645514 aaaaaatagttccaa i papAnu2.chr16 I 4 C 0 s chlSab2.chr16 195986 15 + 75148670 AAAAAATAGTTCCAA i chlSab2.chr16 I 8559 C 0 s calJac3.chrUn_GL286409 1006538 13 - 1291538 --aaaaaagttccaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75935658 83 + 122082543 I e canFam3.chr9 15766469 0 - 61074082 C a score=25785.000000 s hg38.chr17_GL383563v3_alt 322074 6 + 375691 ACACAG s panTro4.chr17 298110 6 + 82630442 ACACAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 180332 6 + 73212453 ACACAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 287351 6 - 81552678 ACACAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 215315 6 + 80904711 ACACAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 224634 6 + 80997621 ACACAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 207682 6 + 74645514 ACACAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 196001 6 + 75148670 ACACAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1006551 6 - 1291538 acacag i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15766469 6 - 61074082 acacag i canFam3.chr9 C 0 C 0 e mm10.chr11 75935658 83 + 122082543 I a score=2286773.000000 s hg38.chr17_GL383563v3_alt 322080 783 + 375691 TATCTGGTACCTAGCAGGCCCTC----------ACAAAACA-----AAACAAAACAAACCCGTTTTTTAAACCAAGCTGGTCCCTGAATGCTGGTGAACTTCTCCGCACTAAAAGGATGAAATGGGA----ATT---AAAAAAAC----TGTGACCC----------------TCTGACCGCAGACCCTGATGATGGATGAAA---TCTTGGCCTG-GGCTGTCAGCCAAG-------GCCATCTGGGCCAAACCATAGGGCAGGAAACAGCAGGCTTCCTCCTCCTG----TCT------GAACTCTGGCCCAGAGAGGAGCTTCCTTCAGCTGGCCGCACCCACTTCCC----------CGACAACATTCCAGAACATTCCA----------TGATAGGCCAGGAGACTCCAGGAAGAGGTCACTGAGTAGCTCTTAGCATCTCC---TCCCAGC-CCAGCCAGGAGAAGATGCT-CCCCCCTTCTAGGACTCCATGTAC---AACTTCTGACCTGTACCCCTGCCCATC---------------------------------------------------------------------------------------ACCCACGGCCTCCCCACAGAGGG-CCAAGGCTCAGCTTGTCTACCTCCGACCTACCTCTCTCCAACGTCTCTAGGCTGCCCCCCA-AGCCAGTAAGAGATGTCCTGGGTGGCTGGGT-TGCTTGTCCTTGGCTATGGCCCTAGTTTGGCTTCTTAAA--CCCTCTTTACCTGGGCCCTTAACTGGTCAT-CT--GCCTCCAGTCCTGGTATCCACTACACATAAACGAGACTCTTCAAGGACTGTCAAGAAACACTCCCCTCCTCAAGCACCCTCAATAGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACTGACGGTCCTCCACAATATAGTCCCAC- s panTro4.chr17 298116 783 + 82630442 TATCTGGTACCTAGCAGGCCCTC----------acaaaaca-----aaacaaaacaaaCCCGTTTTTTAAACCAAGCTGGTCCCTGAATGCTGGTGAACTTCTCCACACTAAAAGGATGAAATGGGA----GTT---AAAAAAAC----TGTGACCC----------------TCTGACCGCAGACCCTGATGATGGATGAAA---TCTTGGCCTG-GGCTGTCAGCCAAG-------GCCATCTGGGCCAAACCATAGGGCAGGAAACAGCAGGCTTCCTCCTCCTG----TCT------GAACTCTGGCCCAGAGAGGAGCTTCCTTCAGCTGGCCGCACCCACTTCCC----------CGACAACATTCCAGAACATTCCA----------TGCTAGGCCAGGAGACTCCAGGAAGAGGTCACTGAGTAGCTCTTAGCATCTCC---TCCCAGC-CCAGCCAGGAGAAGATGCT-CCCCCCTTCTAGGACTCCATGTAT---AACTTCTGACCTGCACCCCTGCCCATC---------------------------------------------------------------------------------------ACCCACGGTCTCCCCACAGAGGG-CCAAGGCTCAGCTTGTCCACCTCCGACCTACCTCTCTCCAACGTCTCTAGGCTGCCCCCCA-AGCCAGTAAGAGATGTCCTGGGTGGCTGGGT-TGCTTGTCCTTGGCTATGGCCCTAGTTTGGCTTCTTAAA--CCCTCTTTACCTGGGCCCTTAACTGGTCAT-CT--GCCTCCAGTCCTGGCATCCACTACACATAAACGAGACTCTTCAAGGACTGTCAAGAAACACTCCCCTCCTCAAGCACCCTCAATAGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACTGACGGTCCTCCACAATATAGTCCCAC- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 180338 775 + 73212453 TATCTGGTACATAGCAGGCCCTC----------acaaaacaaaaccaaacaaaacaaaCCTGTTTTTTAAACCAGGCTGGTCCCTGAATGCTGGTGAACTTCTCCGCACTAAAACGATGAAATGGGA----GTT----AAAAAAC----CGTGACCC-----------------CTGACCACAGACCCTGA-GATGGATGAAA---TCTTGGCCTG-GGCTGTCAGCCAAG-------GCTATCTGGGCCAAGCCATAGGGCAGGAAACAGCAGGCTTCCTCCTCCCG----TCT------GAACTCTGGCCCAGAGAGGAGCTTCCTTCAGCTGACCGCACCCACTTCCC----------CGAGAACATTCCAGAACATTCCA----------TGCTAGGCCAGGAGACTCCAGGAAGAGGTCACTGAGTAGCTCTTA------------CTCAGTGCCGGCCAGGAGAAGATGCT-CCCCCCTTCTAGGACTCCATGCAC---AACTTCTGACCTGCACCCCTGCCTATC----------------------------------------------------------------------------------------CCCACGGCCTCCACACAGAGGG-CCAAGGCTCAGCTTGTCCACCCCCGA-CTGCCCCTCTCCAACGTCTCTAGGCTGCTCCCCA-AGCCAGTAAGAGATGTCCTGGGTGGCTGGGT-TGCTTGTCCTTGGCTATGGCCCTAGTTTGGCTTCTTCAA--CCCTCTTTACCTGGGCCCTTAACTGGTCAT-CT--GCCTCCAGTCCTGGTATCCACTACGTATAAACGAGACTCTTCAAGGACTGTCAAGAAACACTCCCCTCCTCAAGCACCCTCAATGGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACTGACGGTCCTCCACAATACAGTCCCAC- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 287357 859 - 81552678 TATCTGGTACATAGCAGGCCCTC----------ATAGAACA-----AAACAAAACAAACCTGTTTTTTAAACCAAGCTGGTCCCTGAATGCTGGTGAACTT---CACACTAAAAGGATGAAATGGGA----GTT--TAAAGAAAC----TGTGACCC---------------CCCTGACTGCAGACCCTGATGATGGATGAAA---TCTTGTCCTG----TCTGAAC---------------TCTGGGCCAAACCACAGGGCAGGAAACAGCAGGCTTCCTCCTCCTG----TCT------GAACTCTGGCCCAGAGAGGAGCTTCCTTCAGCTGACCGCACCCACTTCCC----------CAAGAACATTCCAGAACATTCCA----------TGCTAGGCCAGGAGACTCCAGGAAGAGGTCACTGAGTAGCTCTTACCATCTTC---TCCCAGC-CCAGCCAGGAGCAGATGCTCCCCCCCTTCTAGGACTCCATTCAC---AACTTCTGACCTGCACCCCTGCCCATCAACAGGACGGACCTGCACCCCTGCCCATCAACAGGACGGACCTGCACCCCTGCCCATCAACAGGACGGACCTGCACCCCTGCCCATCACCCACAGCCTCCCCACACACCG-CCAAGGCTCAGCTTGTCCACCTCCAACCTGCCTCTCTCCAACGTCTCCAGGCTGCCCCCCA-AGCCGGTGAGAGAtggcctgggtggctgggt-tgcttgtccttggctatggccctggtttggcttCTTAAA--CCCTCTTTACCTGGGCACTTAACGGGTCAT-CT--GCCTCCAGTCCTGGTGTCCACTACACATAAACGAGAGTCTTCAAGGACTGTCCAGAAACACTCCCCTCCTCAAGCATCCTCAATGGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACTGATGGTCCTCCACAACACAGTCCCAC- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 215321 779 + 80904711 TATCTGGTGTGTAGCAGGCCCTCacaaaacaaaacaaaaca-----aaacaaaacaaaCCTGTTTTTTAAACCAAGCTGGCCCCTGAATGCTGGTGAACTTCTCCACACTCAAAGGATGAAATGGGA----GCT---TAAAACA---------------------------------ACGGCAGACCCTGATGATGAATGAAA---TCCTGGCCTGGGGCCATCAGCCAAG-------GGCATCTGGGCCAAACCAGAGGGCAGGAAACAGCGGACTTCCTCCTCCCA----CAT------GAACTCTGGCCCAGAG-GGAGCTTCCTTCAGCCGACCGCACCCACTTCCCccagaacattccagaacattccagaacattccacaacaCTCCGTGCTAGGCCAGGAGGCTCCAGGAAGAGGTCACTGAGTAGCTCTTACCATCTCC---TCCCAGC-CCAGCCAGGAGAAGCTGCC-CCTCCCGTCCAGGACTCCATGCAC---AACTTCTGA--------CCTGCCCATC---------------------------------------------------------------------------------------ACCCACGGCCTCCCCACAGAGGG-CCAGGGCTCAGCTCGTCCACCTCCGACCCGCCTCACTCCAGCGCCTCTAGGCTGCCCTCCA-AGCCAGTACAGGATGGCCTGGGTGGCTGGGC-GGCTTGACTTTGGCTATGGCCCTAGTC-GGCTTCTGAAA--CCCTCTCTACTTGGGCCCCTGACTAGTTAT-CT--GCCTTCAGTCCTGGTA------------AAACGAGACTTTTCAAGGACCGTCAAGAAACACTCCCCTCCTCAAGCACCCTCAATGGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACTGATGGTCCTCCACAATACAGTCCCAC- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 224640 779 + 80997621 TATCTGGTGTGTAGCAGGCCCTCacaaaacaaaacaaaaca-----aaacaaaacaaaCCTGTTTTTTAAACCAAGCTGGCCCCTGAATGCTGGTGAACTTCTCCACACTCAAAGGATGAAATGGGA----GCT---TAAAACA---------------------------------ACGGCAGACCCTGATGATGAATGAAA---TCCTGGCCTGGGGCCATCAGCCAAG-------GGCATCTGGGCCAAACCAGAGGGCAGGAAACAGCGGACTTCCTCCTCCCA----CAT------GAACTCTGGCCCAGAG-GGAGCTTCCTTCAGCCGACCGCACCCACTTCCCccagaacattccagaacattccagaacattccacaacaCTCCGTGCTAGGCCAGGAGGCTCCAGGAAGAGGTCACTGAGTAGCTCTTACCATCTCC---TCCCAGC-CCAGCCAGGAGAAGCTGCC-CCTCCCGTCCAGGACTCCATGCAC---AACTTCTGA--------CCTGCCCATC---------------------------------------------------------------------------------------ACCCACGGCCTCCCCACAGAGGG-CCAGGGCTCAGCTCGTCCACCTCCGACCCGCCTCACTCCAGCGCCTCTAGGCTGCCCTCCA-AGCCAGTACGGGATGGCCTGGGTGGCTGGGC-GGCTTGACTTTGGCTATGGCCCTAGTC-GGCTTCTGAAA--CCCTCTCTACTTGGGCCCCTGACTAGTTAC-CT--GCCTTCAGTCCTGGTA------------AAACGAGACTCTTCAAGGACCGTCAAGAAACACTCCCCTCCTCAAGCACCCTCAATGGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACTGATGGTCCTCCACAATACAGTCCCAC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 207688 757 + 74645514 TATCTGGTATGTAGCAGGccctc----------acaaaaca-----aaacaaaacaaacctgttTTTTAAACCAAGCTGGCCCCTGAATGCTGATGAACTTCTCCACACTAAAAGGATGAAATGGGA----GTT---TAAAACA---------------------------------ACAGCAGACCCTGATGATGAATGAAA---TCCTGGCCTGGGGCCGTCAGCCAAG-------GGCATCTGGGCCAAACCAGAGGGCAGGAAACAGCCGGCTTCCTCCTCCCC----CAT------GAACTCTGGCCCAGAG-GGAGCTTCCTTCAGCCGACCGCACCCACTTCCC----------CCAGAACATTCCAGAACATTCCACAACACTCCGTGCTAGGCCAGGAGGCTCCAGGAAGAGGTCACTGAGTAGCTCTTACCATCTCC---TCCCAGC-CCAGCCAGGAGAAGATGCC-CCTCCCGTCCAGGACTCCATGCAC---AA---CTGA--------CCTGCCCATC---------------------------------------------------------------------------------------ACCCACGGCCTCCCCACAGAGGG-CCAGGGCTCAGCTCGTCCACCTCCGACCCGCCTCACTCCAGCGCCTCTAGGCTGCCCTCCA-AGCCAGTACGGGATGGCCTGGGTGGCTGGGT-GGCTTGTCTTTGGCTATGGCCCTAGTCTGGCTTCTGAAA--CCCTCACTACTTGGGCCCCTGACTAGTGAT-CT--GCCTTCAGTCCTGGTA------------AAACGAGACTCTTCAAGGACCGTCAAGAAACACTCCCCTCCTCAAGCAGCCTCAATGGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACTGATGGTCCTCCACAATACAGTCCCAC- i papAnu2.chr16 C 0 I 110 s chlSab2.chr16 196007 770 + 75148670 TATCTGGTATGTAGCAAGCCCTCacaaaacaaaacaaaaca-----aaacaaaacaaaCCTGTTTTTTAAACTAAGCTGGTCCCTGAATGCTGGTGAACTTCTCCACACTAAGAAGATGAAATGGGA----GTT---TAAAACA---------------------------------ACGGCAGACCCTGATGATGAATGAAA---TCCCGGCCTGGGGCCATCAGCCAAG-------GGCATCTGGGCCAAACCAGAGGGCAGGAAACAGCAGGCTTCCTCCTCCCA----AAT------GAACTCTGGCCCAGAG-GCAGCTTCCTTCAGCCGACCGCACCCACTTCCC----------ccagaacattccagaacattccagaacaCTCCGTGCTAGGCCAGGAGGCTCCAGGAAGAGGTCACTGAGTAGCTCTCACCATCTCC---TCCCAGC-CCAGCCAGGAGAAGATGCC-CCTCCCTTCCAGGACTCCACGCAC---AACTTCTGA--------CCTGCCCATC---------------------------------------------------------------------------------------ACCCACGGCCTCCCCACAGAGGG-CCAGGGCTCAGCTCGTCCACCTCCGAACCGCCTCTCTCCAGCGCCTCTAGGCTGCCCTCCA-AGCCAGTAAGGGATGGCCTGGGTGGCTGGGC-GGCTTGTCTTTGGCTATGGCCCTAGTCTGGCTTCTGAAA--CCCTCTCTACTTGGGCCCTTGACTGGTTAT-CT--GCCTTTAGTCCTGCTA------------AAACGAGACTCTTCAAGGACTGTCAAGAAACACTCCCCTCCTCAAGCACCCTCAATGGCTCCCACTGCCTCCTGAAAAGTTCAGAGGCCACACCCTGAGACCGATGGTCCTCTACAATACAGTCCCAC- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1006557 757 - 1291538 catgtggtacatagcaggccctt----------aaaaaaCA-----AAAC----CAAACTTCTTTTTTAAACCAAGCTGGTCCCTGAATGCTGGTGAACTTCTCCACACTAAAAGGATGAAATGGGG----GTT--TTAAAAAAC----TGTGCCCTCCCCTTCTCCCCTACCCCCACCCACAGACCCTGATGATGAATGAAA---TCTTGGCCTGGGGCTGTCAGCCAAG-------GCCATCTGGGCCAAACCACAGGGCAGGAAACAGCAGCCTTCTTCCTCCTG----CTCCTGCAAGAACTCTGGCCCAGAGAGGACATTCCTTCAGCTGACCACACCCATTTCCC----------TGAGAACATTTCAGAATATTCCA----------TGCTAGGCCATGAAACTCCAGGA-----------AGTAGCTCTTACCACCTCC---TCCCAGC---AGCCGGGAGAAGACACC-CCTCCCTTCCAGGACTCCATGCAC---ATCTTGTGA--------CCT-----TC---------------------------------------------------------------------------------------CCCCCTGCCCTCCCCACAGAGGG-CAAAGGGTCAGCTCGCCCACCTACAACCCGACTCTCTCCAGCATATCTAGGCTG-------------GAGAGAGATGTCCTGGGGGGCTGAGG-GGCTCGTCCTTGACTATGGCCCTAGTTTGGCTTCTTAAT--TTCTCTTTACTTGGGCCCTGGACTGGTCAT-CT--GCCCCCAGTCCTGGGATCCACTACAAATAAACAAGACTCGTCAAGGACTATCCAGAAACACTTCCCTCCTCAGCCATCCTCGATGGCTCCCACTGCCTCCTCAAAAGTTCAGAGGCCACAC-------CTGATGGTCCTCCACAACACAGTCCAA-- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75935741 745 + 122082543 TGCCTGGCACAGAGAAGACCCTC----------AAGGGGAA-----AGGGTGAACAACAGGGGATTTTAAGCAAAGCTGGTGCCTGAAT--TGAGGGACTCCT-CACATGGATAGGAAGAAATGGGACAGCGAT---GAACAAATAAAAGGTGACCG---------------TGGTGCACACAGGCCCTGCTGATGAATGACATCCTCCTGACCCTGGGCTCTGAGCCAGGCAGGGCTGTCGTCTAAACCAAACC--CAGGCAGGAAACTGCACACTTCCT--------------------GG--TCTAG-CCACAGAAAAGCTTCCTTCAGTTCACCCCACCCACTTCCC----------TCATAGCATTCCAGAACATTCTG----------TGGCAGGCCTGGAGGCACCAGGA-GCTGTCACTGGATCCCTCCTTACCTATCCTTTTCCTAGG-ACATTCAGAACAGG----C-CATCCCAGTCAGCGCCCCCCGGCCCCAGGCTTCTGGTCTGCCACCATGCTCAGC---------------------------------------------------------------------------------------ATGCTTTGTAACC-CACAGA----CCAAAGCTGGTCTCATCTGCCTCAGACCTGACTCTGTCCAATACTTCT-GGCTGCAAGCCAGAGTCAGCAGGAGATGAACTGAGG--------------------GAATATGGCCCTAGTTCGGCCTTATAAAAGTACTTTTTACATGAACCCCAGCCT-GTCAT-CTTGACTCCAAGTCCTCACA--------------ACGAGGCTCTTCAAGGATAATCATGAGCCAGTCTTCTCTTCAAACTCCTTCAGTGGCTCCTGATGCTGCCTGG-------AGAGGCTACACCCAGAGACTGGTAGCTCTTTATAATACAGGTCAAT- i mm10.chr11 I 83 I 1 s canFam3.chr9 15766475 734 - 61074082 ggactggaacacagtaggtcccc----------aaGGGAGA-----AAACAAAA-ATTCTTGTCTTTTATACCAAGCGGATCTCTGA--GCTGCTGAACTTACCTGCACTAGAAGGAAGAGATGGGACA--GTTAAATAAGACA-----ACTGGCCC---------------AGATGACTGCAGGCTCTGCTGACGAATGAAA---CCCTTGCCTGGGGCTGTCAGCCA-G-------GCTGCCTGGGCCAA-CTAGAGGGCAGGAAAATGCACGCTTCCTTCTGCAGGAACTCA------GCACCCTGGCCTGGAGAGGAGCTTCCTTCAGCTGCCCCCACCCATTTCCT--------------------CCAGAACATTCCA----------TGCTCAGCCAGGAGA---CAACAAGAGACCACTGGGT--------------CA---ACTGAGA-GGGGTGGGCAGAAG------CCT-CCTTCCCTGCCTCTGTGCAC---AG--TCTGACCTACACCTTTGCCTGGC---------------------------------------------------------------------------------------TCCCATGGTTTCCCCATACAGAGACCAAGGCTTGCCTTGTCCACCCTAGACTTGCCTCTGCCCACCTGCTCCCGGCTGCTGGCCAGAAACATTGGGAGACCAGCTAGGGTGCTGGGTCTGCTTGTCCTCAGCCACAGCCCTAGGTTGGCCTTTTACA--CTCTCTTTACTGAGGTCCCTGACAGGTCATCCT--ACCTCTAGTTCTGGTGCCTACTAC----AAGTGAGTCTCTTCAACAGCAGTCAGGAACCACTCCCCATCTCAAGCACTTTCAATGTCTCCCACTGCCCC--------TTCACAGG------------ATTCATAGTCCTCCCCAATATAATCCAAAC i canFam3.chr9 C 0 C 0 a score=1365.000000 s hg38.chr17_GL383563v3_alt 322863 1 + 375691 A s panTro4.chr17 298899 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 181113 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 288216 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1007314 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15767209 1 - 61074082 A i canFam3.chr9 C 0 C 0 e mm10.chr11 75936486 1 + 122082543 I e chlSab2.chr16 196777 0 + 75148670 C e papAnu2.chr16 208445 110 + 74645514 I e rheMac3.chr16 216100 0 + 80904711 C e macFas5.chr16 225419 0 + 80997621 C a score=1330038.000000 s hg38.chr17_GL383563v3_alt 322864 524 + 375691 CCTACCCTCTGTTCCCTACAGGACTCACCTGCTGCAACCAAAATAGATTACACCAAGAATCGTACCCACATGTCTGGACCTGTAAGTACAGACCCACCTC----CCATCTCCA-CCTAGCTGAGTCTCACTCCTCCTGCACCCCGCCTG---------------------------------------TCTCTTCCATG----------------------------------------------AGCCTCTC-TTTTTCTTGTCTCTGAA----TTCCTCCA-----GCACGCAAtttccaaagcacaggcctccacacgccaccagccatcccca--------------------cgtggctcccgtacga-------------------------------------------------------------------------------------------------------ttctttactt-----------------------aatatttccctttaaatcaacccactctttt---acttgaacaaattta--------tttt---------------------------------------------caaaggaaa-----------------------------------------------------------ctgtatatctccaccataaataga---------------aaaa-ccatgccatatgccacaaatagaaggcagatgaaaaaaaacaAGTTATGCTCTAATACACATGAAAATAAATCATCAGGAAAACATTTTTAAATGCTTGTCCATGTGCCTGACGAGGTAAACCTA---TATAC---AGGTTGTAAATG----GAACAGCACCTCGAGGGA--------CAAGGGTCCCGAAA-------- s panTro4.chr17 298900 493 + 82630442 CCTACCCTCTGTTCCCTACAGGACTCACCTGCTGCAAC-------------------------------ATGTCTGGACCTGTAAGTACAGACTCACCTC----CCATCTCCA-CCTAGCTGGGTCTCACTCCTCCTGCACCCCGCCTG---------------------------------------TCTCTTCCATG----------------------------------------------AGCCTCTC-TTTTTCTTGTCTCTGAA----TTCCTCCA-----GCATGCAAtttccaaagcacaggcctccacacgccaccagccatcccca--------------------cgtggctcccgtacga-------------------------------------------------------------------------------------------------------ttctttactt-----------------------aatatttccctttaaatcaacccactctttt---acttgaacaaattta--------tttt---------------------------------------------caaaggaaa-----------------------------------------------------------ctgtatatctccaccataaataga---------------aaaa-ccatgccatatgccacaaatagaaggcagatgaaaaaaaacaAGTTATGCTCTAATACACATGAAAATAAATCATCAGGAAAACATTTTTAAATGCTTGTCTATGTGCCTGACGAGGTAAACCTA---TATAC---AGGTTGTAAATG----GAACAGCACCTCGAGGGA--------TAAGGGTCCCGAAA-------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 181114 492 + 73212453 CCTACCCTCTGTTCCCTACA--------------------------------CCAAGAATCGTACCCACATGTCTGGACCTGTAAGTACAAACTCACCTC----CCATCTCCA-CCTAGCTGGGTCTCACTCCTCCCACACCCCGCCTG---------------------------------------TCTCTTCCATG----------------------------------------------AGCCTCTC-TTTTTCTCGTCTCTGAA----TTCCTCCA-----GCCTGCAAtttccaaagcacaggcatccacacgccacctgccatcccca--------------------cgtggctcccgtacga-------------------------------------------------------------------------------------------------------ttctttactt-----------------------aatatttccctttaaatcaacccactctttt---acttgaacaaattaa--------tttt---------------------------------------------caaaggaaa-----------------------------------------------------------ctgtatatctccaccataaataga---------------aaaacccatcccatatgccataaatagaaggcagctg-aaaaaaacaagttatgctctaatacacatgaaaataaaccaTCAGGAAAACATTTTTAAATGCTTGTCTGTGTGCCTGACGAGGTAAACCTA---TACAC---AGGTTGTAAACG----GAGCAGCACCTCAAGGGA--------CAAGGGTCCTGATA-------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 288217 519 - 81552678 CCTACCCTCTGTCCCCTACAGGCCTCACCTGCTGCAACCAAAATAGACTACACCAAGAATCGTACCCCCATGTCTGGACCTATAAGTACAGACTCACCTC----CCATCTCCA-CCTAGCTGGGTTGCACTCCTCCCGCACCCCGCCTG---------------------------------------TCTCTTCCATG----------------------------------------------AGCCTCTC-TCTTCCTCATCTCTGAA----TTCCTCca---------gcaatttccaaagcacaggcatccacacgccacctgccattccca--------------------catggctcccatacga-------------------------------------------------------------------------------------------------------ttctttactt-----------------------aatatttccctttaaatcaacccactctttt---acttgaacaaattta--------tttt---------------------------------------------caaaggaaa-----------------------------------------------------------ctttatatgtccaccataaataga---------------aaaa-ccatcccatatgccataaatagaaggcaactg-aagaaaacaagttatgctctaatacacatgaaaataaatcaTCAGGAAAACATTTTTAAATGCTGGTCTATGTGCCTGACGAGGTAAACCTA---TATAT---AGGCTGTAAACG----GAACAGCACCTCGAGGGA--------CAAGGGTCCCGAGA-------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 216100 522 + 80904711 CCTTCCCTCCGTTCCCTGCGGGACTCGCCCGCTGCAGCCAAAATAGACCACACCAAGAATCGTGCCCACATTTCTGGACCTGTAAGTACAGACTCACCCT----CCATCTCCA-CCTAGCTGGGTTTCACTCCTCCCGCACCCCACCCG---------------------------------------TCTCTTCCATG----------------------------------------------ATCCTTTC-TTTTTCTCATCTCTGAA----TTCCTCCA-----GCACACAAtttccaaagtgcgggcatccacgtgccacctgccatccccg--------------------tgcggctcccgtacta-------------------------------------------------------------------------------------------------------ttctttactt-----------------------aatatttccctttaaatcaacccactccttt---acttgaacaaattta--------tctt---------------------------------------------caaaggaaa-----------------------------------------------------------cttcgtatctccaccataaataga---------------aaaa-ccatcccatatgccataaatagaaggcaactgaaaaaaaacaagttatgttctaatacacatgaaaataaatcaaCAGGAAAACA--CTGAAATGCTTGTCTGTGTGCCTGACGAGGTAAACCTA---TATAT---AGGTTGTAAATG----GAACAGCACCTCGAGGGG--------CAAGGGTCCCGGAA-------- i rheMac3.chr16 C 0 I 36 s macFas5.chr16 225419 522 + 80997621 CCTACCCTCCGTTCCCTGCGGGACTCGCCCGCTGCAGCCAAAATAGACCACACCAAGAATCGTGCCCACATTTCTGGACCTGTAAGTACAGACTCACCCT----CCATCTCCA-CCTAGCTGGGTTTCACTCCTCCCGCACCCCACCCG---------------------------------------TCTCTTCCATG----------------------------------------------ATCCTTTC-TTTTTCTCATCTCTGAA----TTCCTCCA-----GCACGCAAtttccaaagcgcgggcatccacgtgccacctgccatccccg--------------------tgcggctcccgtacta-------------------------------------------------------------------------------------------------------ttctttactt-----------------------aatatttccctttaaatcaacccactccttt---actcgaacaaattta--------tttt---------------------------------------------caaaggaaa-----------------------------------------------------------cttcatatctccaccataaataga---------------aaaa-caatcccatatgccataaatagaaggcaactgaaaaaaaacaagttctgttctaatacacatgaaaataaatcaaCAGGAAAACA--CTGAAATGCTTGTCTGTGTGCCTGACGAGGGAAACCTA---TATAT---AGGTTGTAAATG----GAACAGCACCTCGAGGGG--------CAAGGGTCCTGGAA-------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 208555 522 + 74645514 CCTACCCTCTGTTTCCTGCAAGACTCGCCTGCCGCAGCCAAAATAGACCACACCAAGAATCGTGCCCACATTTCTGGACCTACAAGTACAGACTCACCCT----CCATCTCCC-CCTAGCTGGGTTTCACTCCTCCCGCACCCCACCTG---------------------------------------TCTCTTCCatg----------------------------------------------atcctttc-tttttctcatctctgaa----ttCCTCCA-----GCACGCAATTTCCAAAGCGCGGGCATCCACGTGCCACCTGCCATCCCCG--------------------TGCGGCTCCCGTACTA-------------------------------------------------------------------------------------------------------TTCTTTACTT-----------------------AATATTTCCCTTTAAATCAACCCACTCTTTT---ACttgaacaaattta--------tttt---------------------------------------------caaaggaaa-----------------------------------------------------------cttTGTATCTCCACCATAAATAGA---------------AAAA-CCATCCCATATGCCATAAATAGAAGGCAACTGAATAAAAACAAGTTATGCTCTAATacacatgaaaataaatcaaCAGGAAAACG--CTGAAATGCTTGTCTGTGTGCCTGACGAGGTAAACCTA---TATAT---AGGTTGTAAATG----GAACAGCACCTCGAGGGG--------CAAGGGTCCTGGAA-------- i papAnu2.chr16 I 110 C 0 s chlSab2.chr16 196777 522 + 75148670 CCTACCCTCTGTTCCCTGCGGGACTCGCCTGCTGCAGCCAAAATAGACCACACCAAGAATCGTGCCCACATTTCTGGACCTATAAGTACAGACTCACCCT----CCATCTCCA-CCTAGCTGGGTTTCACTCCTCCCGCACCCCAACTG---------------------------------------TCTCTTCCATG----------------------------------------------AGCCTTTC-TTTTTCTCATCTCTCAA----TTCCTGCA-----GCACGCAAtttccaaagcacgggcatccacgtgccacctgccatccccg--------------------tgcggcccctgtacta-------------------------------------------------------------------------------------------------------ttctttactt-----------------------aatatttccctttaaatcaacccactctttt---acttgaacaaattta--------tttt---------------------------------------------caaaggaaa-----------------------------------------------------------cttcgtatctccgccataaataga---------------aaaa-ccatcccatatgccataaatagaaggcaactgaaaaaaaacaagttatgctctaatacacatgaaaataaatcaaCAGGAAAACA--CTGAAATGCTTGTCTGTGTGCCTGATGAGGTAAACCTA---TATAT---AGGTTGTAAGTG----GAACAGCACCTCGAGGGG--------CAAGGGTCCTGGAA-------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1007315 516 - 1291538 CTCACCCTCTGTTCCATACAGGACTCACCTGCTGCA-CCAAAGTGAAATAAACCGGGAATCATACCCATGCTTCTGGACCTGTAAGCACAGACTCCCCTC----CTACCTCCA-CCCAGCAGGGTCCCA---CTCCCGCA-CCCGCCTG---------------------------------------ACTCTGCCATG----------------------------------------------AGCTTTTCATTTTTCTCATCTCTGAA----TTCCTCCA-----GCATGCTACTTCCAAA-CTCAGATATCCACATGCCACCTGCCAGCCCCA--------------------TGTGGCCCCCGGATGA---------------------------------------------------------------------------------------------------------Cttcactt-----------------------aatatctccctttgaatcaacctactctttt---atgtgaacaaagtta--------t-tc---------------------------------------------caacagaaa-----------------------------------------------------------ctttgtatctccaccataaataga---------------aaaa-ccatcccacgtgccataaatagaaggcaactgaaaaagacaaaGTTACTCTTCAATACACGTGAAAATAAGTAATAGTGAAAACATGTTTGAGTGCTAGTCTGTAT-CCCGATGAGGTAAACCTGTACTACAC---AGCTTGTAAATG----TA-CACCCTCTCGAGCGG---------GTGGGTCCTGAGA-------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75936487 462 + 122082543 --CACCCTCCAGTCCCTACCAGTCTTATCCATTACAATTCAAATGGACCACACC------TGTGGCCACTTCTCTGGACCTAGGAACCCAGTCTTTCTCCTGTTCCAGCTCCC-CTTCATT--GTCCTGCCCCTCTT-CAGGCCGCCTC---------------------------------------ACTATTCCACA----------------------------------------------GGCCCTTT-GCTTT----------------TTGCTTCG--------------TTCTAGAAGGCTG---------------CTGCTAAGCCTT--------------------GGAGGGTCCAATGCTATT----------------------------------------------------------------------------------------------------ATTCTTCATTT-----------------------CATATTTTCCTTTAAGTCAATTCATGGTTTT---ATTCAAATTTGTTTGAGTAAAACTTTT---------------------------------------------CAAAGGTAA-----------------------------------------------------------CTTTTCTTCTCCACCATAAGTAGA---------------AAA--CTACATCATTTG-CGTAAAGAAAAGTCTATCAGAAG------------GTTCTAATTC-CATTAAAATAcaaggtcctggg------tttaaat-------------ctcagaggggcaaaacaa---aatgcccacagtggcaaatgatcagtaaaacaccttaaaagc--------ccagg---cagaga-------- i mm10.chr11 I 1 I 4 s canFam3.chr9 15767210 879 - 61074082 CCAACCC---------CACAAGGCTCATC--------ATGAAATGAGTTTGAGCAAGATGTGCACACACATTTCTGGACCTGTGAGTACAGGTTCACC------CTATCTAGATCCTAGCTGGATCCTATTCCTCCCTGGCCCCACATAACTCTCCCAATAGCCCTTTCCCTTCCTGGTCTCTGAATTCCTCTAGCATGCTGttcccaaacctcaggcatctcaagccacctggtatcaccatgtggcccctg-tactattctttacttaatattttcctcaaaataaactcactctttcacttaagcttattttcaaaagaaaccttttatctccaccataaacagaaaactaTATTggggtgcctgggtgactgagtcagctgagtaactcttgattgcatctctgatcatgatctcagggtcgtgagatgaaaccctgggtcagtatgtgctgagcgtggagtctgtttgagattctctctctctctgcccctctccccactcacaaacatgtgcccacacatgtgctctctctctttaaaataaaaaaaaatca--------ttttttaaagattttattcgtttattcatgagtgatgaataaacataggcagaggaaaaggactcgatcctggaatcatgacctgagccaaaggcagacactcaaccactgagtcacccaggtgcctcTAAAATAAATAAATCTTAAAAAGAAAATAAAA-CTGTATCATTTGCCATAAACAGAAGGCAACTGAAATAAACAAGGCTATATTCCAACAGACATGAAAATACATAATTCATCAAGTGT-TTTAAATGCTCATCTGTATTACATACTTAATATTACTG---TATAA-------CATACTTA----AAATCACACCCTAAGAAATGCTGCTTTGgggatccctgggtggcgcag i canFam3.chr9 C 0 C 0 a score=24582.000000 s hg38.chr17_GL383563v3_alt 323388 47 + 375691 CGG----GCCCCTGCATGTGCGTACAGGCCGTGCTTACATCCTGACAACTT----------------- s panTro4.chr17 299393 47 + 82630442 CGG----GCCCCTGCATGTGCGTACAGGCCGTGCTTACGTCCTGACAACTT----------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 181606 47 + 73212453 CGG----GCCCCTGCGTGTGTGTACAGGCTGTGCTTACATCCTGACAACTG----------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 288736 47 - 81552678 CGG----GTCCCTGCATGTGCATACAGGCCATGCTTCCATCCTGACAACGG----------------- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 225941 36 + 80997621 --------CCCCTGCGTATGGGTTTGGGGAGTGCTCA-GTCCTGA----------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 209077 40 + 74645514 CGG----GCCCCTGCGTATGGGCTTGGGGAGTGCTCA-GTCCTGA----------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 197299 40 + 75148670 CGG----GCCCCTGCGTGTGGGTTTGGCGAGTGCTTA-GTCCCGA----------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1007831 28 - 1291538 -TG----GCCCCTGCCTGTAGGGA--------------GCCCTGACA--------------------- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75936953 40 + 122082543 cgg----atttctgagttcgagaccagtgtggtctat-atagtga----------------------- i mm10.chr11 I 4 C 0 s canFam3.chr9 15768089 62 - 61074082 cggtttagcacctgcctttg-gcccagggtgcg-----atcctggagacccgggatggaatcccacat i canFam3.chr9 C 0 C 0 e rheMac3.chr16 216622 36 + 80904711 I a score=1524480.000000 s hg38.chr17_GL383563v3_alt 323435 689 + 375691 CAACTGCTCCTG----ACCAAGTCAACTGGCCACGCGGCCTTCCAAAATC----TTCAAAAA------------TCCCCTCCTGCTC-----------------T-----------------------------------------AAGACGCGTGGCCTTGGCACTTTA---TGT---------TCTGCTTT----CTTTGTGGCCCCTGGGTTTTTCGGCCCCATCTCACAGTTATCT-GGGG---------------------------------------------ACTTGT--------------------CACCAAATGTGAGTATCCCAGGGTAGGGAGCACAGAGCCTGCTGCAGCCCCTGAGCCAGT-CTTGCACGCAGCATAACACGCAATACA--AACAGCTCTCCAACAGCACGCTCTGGTCTGCTCCGATGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCTGCT--------------AGCGCACAACCCCTCTGCCCCACTCCCCCAAATCCATCTCTGTCCACTGGGGTGTTTCAAAGGACCACACAGAAAG-----AGCAACGGAGGCACCAGCGGGGCATGAGG-CTGTTCTCCAGCCCCGGCTGCCTCTTCTTTAGAAGCAGCAGGACCTGCGGCACGAGGCTGTTCTCCAGCCCCGGCTGCCTCTTCTTTAGAAGC---------------------------------------------------------AGCAGGACCTGGGGCAGCC-----TGGAAAAGCAAGTTTCCAGTCAACGATTAACCAGACGCTCTCCCAGCAAAGACACAAAC-CTTTTCCCCGGAAGTTAGCAAAGTTCTGTGAAAACCCCTGCATGAACTGGGCCCCTGACTCCAGGAAAAC---AGAGGCATCTTCCAATGTC s panTro4.chr17 299440 689 + 82630442 CAACTGCTCCTG----ACCAAGTCAACTGGCCACGCGGCCTTCCAAAATC----TTCAAAAA------------TCCCCTCCTGCTC-----------------T-----------------------------------------AAGACACGTGGCCTTGGCACTTTA---TGT---------TCTGCTTT----CTTTGTGGCCCCTGGGTTTTTCGGCCCCATCTCACAGTTATCT-GGGG---------------------------------------------ACTTGT--------------------CACCAAATGTGAGTATCCCAGGGTAGGGAGCACAGAGCCTGCTGCAGCCCCTGAGCCAGT-CTTGCACGCAGCATAACACGCAATACA--AACAGCTCTCCAACAGCACACTCTGGTCTGCTCAGATGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCTGCT--------------AGCACACAACCCCTCTGCCCCACACCCTCAAATCCATCTCTGTCCACTGGGGTGTTTCAAAGGACCACACAGAAAG-----AGCAACGGAGGCACCAGCGGGGCATGAGG-CTGTTCTCCAGCCCCGGCTGCCTCTTCTTTAGAAGCAGCAGGACCTGCTGCACGAGGCTGTTCTCCAGCCCCGGCTGCCTCTTCTTTAGAAGC---------------------------------------------------------AGCAGGACCTGGGGCAGCC-----TGGAAAAGCAAGTTTCCAGTCAACGATTAACCAGACGCTCTCCCAGCAAAGACACAAAC-CTTTTCCCCGGAAGTTAGCAAAGTTCTGTGAAAGCCCCTGCATGAACTGGGCCCCTGACTCCAGGAAAAC---AGAGGCATCTTCCAATGTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 181653 746 + 73212453 CAACTGCTCCTG----ACCAAGTCAGCTGGCCATGAGGCCTTCTACAACC----TTCAAAAA------------TCCCCTCCTGCTC-----------------T-----------------------------------------AAGACACGTGGCCTTGGCACTTTA---TGT---------TTTGCTTT----CTTTGTGGCCCCTGGGTTTTTTGGCCCCATCTCACAGTTATCT-GGGG---------------------------------------------ACTTGT--------------------CACCAAATGTGAGTATCCCAGGGTAGGGAGCACAGAGCCTGCTGCAGCCCCTGAGCCAGT-CTTGCACGCAGCATAACACGCAATACA--AACAGCTCTCCAACAGCACGCTCCGGTCTGCTCAGATGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCTGCT--------------AGCACACAACCCCTCTGCCCCGCATCCCCAAATCCACCTCTGTCCACTGGGGTGTTTCAAAGGACCACGCAGAAAG-----AGCAACGGAGGTACCAGTGGGGCATGAGG-CTGTTCTCCGGCCCCGGCTGCCTCTTCTTTAGAAGCAGTAGGACCTGCTGCATGAGGCTGTTCTCCAGCCCCGGCTGCCACTTCTTTAGAAGCAGCAGGACCTGCTGCATGAGGCTGTTCTCCAGCCCCGGCTGCCACTTCTTTAGAAGTAGCAGGACCTGCAGCAGCC-----TGGAAAAGCAAGTTTCCAGTCAACGATTAACCAGACGCTCTCCCAGCAAAGACACAAAC-CTTTTCCCCGGAAGTTAGCAAAGTTCTGTGAAAACCCCTGCATGAACTGGGCCCCTGACTCCAGGAAAAC---AGAGGCATCTTCCAATGTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 288783 628 - 81552678 CCACTGCTCCTG----ACCACGTCAGCTGGCCACGCGGCCTTCTACAATC----TTCAAAAA------------TCCCCTCCTGCTC-----------------T-----------------------------------------GAGACACGTGGCCTTGGCACTTGC---GTT---------TTTG--------CTTTGTGGCCCCTGGGTTTTTTGGCCCCATCTCACAGTTATCT-GGGG---------------------------------------------ACTTGT--------------------CACCAAATGTGAGTATCCCAGGGTAGGGAGCACAGAGCCTGCTGCAGCCCCTGAGCCAGT-CTTGCACGCAGCATAACACGCAATACA--AACAGCTCTCCAACAGCACGCTCCGGTCGGCTCAGATGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCCGCT--------------AGCACACAACCCCTCTGCCCCGCACCCCCAAATCCATCTCTGTCCACTGTGGTGTTTCAAAGGACCATGCAGAAAG-----AGCAACGGAGGCACCAGCGGGGCACGAGG-CTGTTCTCCAGCCCTGGCTGCCTCTTCTTTAGAAGC------------------------------------------------------------------------------------------------------------------AGCAGGACCTGGGGCAGCC-----TGGAAAAGCAAGTTTCCAGTCAACGATTAACCAGACACTCTCCCAGCAAAGACACAAAC-CTCTTCCCCGGAAGTTAGCAAAGTTCTGTGAAAACCCCTGAATGAACTGGGCCCCTGACTCCAGGAAAAC---AGAGGCATCTTCCAATGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 216658 592 + 80904711 CAGTTGCTCCTG----ACCAAGTCCGCTGGCCACACGGCCTTCTAAAGTC----TTCAAAA--------------CCCCTCCTGCTC-----------------T-----------------------------------------AAGACACGTGGCCTTGGCATCTTA--TTTT---------TTTGCTTT----CTTTGGCGCCCTTAGGTGTTTTGGCCCCATCTCACAGTTATCT-GGGG---------------------------------------------ACTTGT--------------------CACCGAAGGTGAGTATCCCAGGGGAGGGAGCGCAGAGC---CTGCAGCCCCTGGGCCGGT-CCTGCCCACAGCATAACACGCAACACA-------------AGCAGTATGTTCCAGTCTGCTCAGCTGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCTGCT--------------AGCACACAACCCCGCCGCCCCGCA-CCCCAAATCCATCTCTGTCCACTGGGGTGTTTCAAAGGACCACA-GGAAAG-----AGCACTGGAGGCACCAGCGGGGCACGAAGCCTGTTCTCCAGCCCCGGCTGCCTCTC------------------------------------------------------------------------------------------------------------------------------GAGGACCTGGGACAGCC-----TAGAAAAGCGAGTTTCCAGTCAACGATTAACCAGACGCTCTCCCAGCGCAGACACAAAC-CTTTTCCCCGGAAGTTAGCAAAGTTCTGGGAGAATCCCTGCGTG------------CACCCCAGGAAAAC---GGAAGCGTCTTCTGATGTT i rheMac3.chr16 I 36 I 14 s macFas5.chr16 225977 592 + 80997621 CAGTTGCTCCTG----ACCAAGTCCGCTGGCCACACGGCCTTCTAAAGTC----TTCAAAA--------------CCCCTCCTGCTC-----------------T-----------------------------------------AAGACACTTGGCCTTGGCACCTCA--TTTT---------TTTGCTTT----CTTTGGGGCCCTTAGGTGTTTTGGCCCCATCTCACAGTTATCT-GGGG---------------------------------------------ACTTGT--------------------CACCGAAGGTGAGTATCCCAGGGGAGGGAGCGCAGAGC---CTGCAGCCCCTGGGCCGGT-CCTGCCCACAGCATAACACGCAACACA-------------AGCAGTATGTTCCAGTCTGCTCAGCTGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCTGCT--------------AGCACACAACCCCGCCGCCCCGCA-CCCCAAATCCATCTCTGTCCACTGGGGTGTTTCAAAGGACCACA-GGAAAG-----AGCACTGGAGGCACCAGCGGGGCACGAAGCCTGTTCTCCAGCCCCGGCTGCCTCTC------------------------------------------------------------------------------------------------------------------------------GAGGACCTGGGACAGCC-----TAGAAAAGCGAGTTTCCAGTCAACGATTAACCAGACGCTCTCCCAGCGCAGACACAAAC-CTTTTCCCCGGAAGTTAGCAAAGTTCTGGGAGAATCCCTGCGTG------------GACCCCAGGAAAAC---GGAGGCGTCTTCTGATGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 209117 590 + 74645514 CAGTTGCTCCTG----ACCAAGTCCGCTGGCCACACGGCCTTCTAAAGTC----TTCAAAAC------------TCTCCTCCTGCTC-----------------T-----------------------------------------AAGACACGTGGCCTTggcacttta--tttt---------tttgcttt----ctttggggCCCTTGGGTGTTTTGGCCCCATCTCACAGTTATCT-GGGC---------------------------------------------ACTTGT--------------------CACCGAAGGTGAGTATCCCAGGGGAGGGAGCGCAGAGC---CTGCAGCCCCTGGGCCGGT-CCTGCCCACAGCACAACACA-AACACA-------------AGCAGCATGTTCCGGTGTGCTCAGCTGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCTGCT--------------AGCACACAACCCCGCCGCCCCGCA-TCCCAAATCCA--TCTGTCCACTGGGGTGTTTCAAAGGACCACACGGAAAG-----AGCACTGGAGGCACCAGCGGGGCACGAGGCCTGTTCTCCAGCCCCGGCTGCCCCTT------------------------------------------------------------------------------------------------------------------------------GAGGACCTGGG------------------GCAAGTTTCCCGTTAATGATTAACCAGACACTCTCCCAGCGCAGACACAAAG-CTTTTCCCCGGAAGTTAGCAAAGTTCTGGGAGAATCCCTGCATGGACTGGGCCCC-GACTCCAGGAAAAC---GGAGGCGTCTTCTGATGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 197339 599 + 75148670 CAGTTGCTCCTG----ACCAAGTCCGCTGGCCACACGGCCTTCTAAAGTC----TTCAAAAC------------TCCCCTCCTGCTC-----------------T-----------------------------------------AAGACACGTGGCCTTGGCACTTTA--TTTT---------TTTGCTTT----CTTTGGGGCCCTTGGGTGTTTTGGCCCCATCTCACAGTTATCT-GGGG---------------------------------------------ACTTGT--------------------CACCGAAGGTGAGTATCCCAGGGGAGGGAGCGCAGAGC---CCGCAGCCCCTGGGCCGGT-CCTGCCCACAGCGTAACAGGCAATACA-------------AGCAGCATGTTCCGGTCTGCTCAGCCGC----GTGGCCCCCATTCTCTGCCTGACCCCAGGCCCATCTGCTGCT--------------AGCACACAACCCCGCACC--------CCCAAATCCATCTCTGTCCACTGGGGTGTTTCAAAGGACCACACGGAAAG-----AGCACTGGAGGCACCAGCGGGGCACGAGGCCTGTTCTCCAGCCCCGGCTGCCTCTT------------------------------------------------------------------------------------------------------------------------------GAGGACCTGGGGCAGCC-----TGGAAAAGCGAGTTTCCAGTCAACGATTAACCAGACGCTCTCCCAGCGCAGACACAAAC-CTTTTCCCCGGAAGTTAGCAAAGTTCTGGGAGAATCCCTGCATGAACTGGGCCCC-GACTCCAGGAAAAC---GGGGGCGTCTTCCCAGGTT i chlSab2.chr16 C 0 I 13 s calJac3.chrUn_GL286409 1007859 584 - 1291538 -------TCCTG----AGCGGATCAGCTGACCAC--GGCCTTC-AAAGCC----CTCACAAA------------TCCCATCCCGCTC-----------------T-----------------------------------------GAGACACGCAGCCTAAGCACTTTA----TT---------TTTGCCTT----CCTTGTGGCCCTTGGGC-CTTTGGCCCCGTCTAACAGTTATCTGGGGG---------------------------------------------ACTTGT--------------------CACCAAATGTGGG--ACCCCGGGGAGGGAGCAGAG------CCTCAGCCCC------------TGCACGCGGCATGACCCACAATACA--AAGGGCTCCCCAGCAGCAGGCTCCAGTCTGCTCAG----------GGCGCCCTGCCCCCACAGGACCCAGG--CCACCTGCTGCT--------------AGCACACAGCCCCTCTGCCCTGCACCCCCAAATCCATCTCCATCCACTGGGGTGTTTGAAAGGACAACGCAGAGC------AGCAGCTGAGGCACCCAC-GGGCCCATGG-CCGTCCTGCAACCCTGGC-ACCTCTGCTGTGGAAGC------------------------------------------------------------------------------------------------------------------TGCAGGACCCCTCGCAGCC-----CGGAAAAGCAGGCTTCCAGTCAACGATTAACCAGACTCCC------CAGACAGACCAAT-CCTTTCCCCAGAAGTGAGCAAAGTTCTGGAAAAACCCCTGCA-GAACCG---CCCGGACTCTGGAAAGACCGAGGAGGTATCTTCCAACGTC i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75936993 639 + 122082543 -----gttcccg----gaca-gccag--ggctacacaga-----gaaaccctgtttcaaaaacaaaCAGCTCATCTCCCTGGTGCTTCAAACTTAGCTGTATTGT-----------------------------------------AATAAACACGGCTTT--CCCTTGAATATTT---------CTTTTTGT----TTTTGTGACCC---------TTGGCCCTGTCTCACAGTTCTCT-GGGATTAGTTTTTTGTTGTTGTTTTTTTGTTTTTCTTCAGTTTTATGATAGCTGA--------------------CCTCAAAAGTGAACACC--------AGGCACACACA-----TTCTAACCCGTCTCTCACT-CCTACACAAGGCTCAGCTTGTCACACACAAACATGCATCCAAAGACGAGTCTGGAT--GGCCAGCTGC----ACATCCCCC-TTCTCCGCCTGGCCCTCGGTCTACCTGCTGTTCAACTTTCCACCAGAACTCAGAAGCCATCCACCCAGGA-CCTCACATCTGTC-CTGTCCACGGGCGTGT---AAAGGATGGGACAGATAGAATACAGCGTCTGAGGCG-----GAGGCTTCTGG-CTCTCCTCCAGCCC--ACAGCCTTTC----------------------------------------------------------------------------------------------------------------------------------------GACTGTC----------AGGCAAGTCTCT-GTGAACCATTTACCAAACACTTTCCCAGTCTGG---CACAC-CCCTTCCCCA-----CAGCAGAG-TCTGGAAAAGCCCCTGCAGGCACTAGACA---GGCAC--AGCACAC---AAAGATAGCTTC-AGGGTC i mm10.chr11 C 0 C 0 s canFam3.chr9 15768151 706 - 61074082 cag--gctcccggtgcatggagcctacttctccctctgcct----atgtc----tct-----------------gcctctctctctc-----------------tgtgtgtgactatcataaataaataaaaattaaaaaaaaaaaaAGAAATGCTACTTTGGCATTTTA--TTTTATTTGGCAGTTTATTTTTGCCTCTCGTGGTCCTTTGCTTTTCTGGCCCTGTCATATAGTTATCT-GGGG---------------------------------------------ACTTGTTCTAGGCCTGTCCTGGTTGACTCCCAAAGTGAGAACTTT------GGGGGTACAGATC---CTACCACCTCTTTCCTGGTGCCAACATACAGCATGATGTGCAATAAA-AAATATTTATCAAACCGGATGTTTCAGTTAGCTCAGTCATATTAATGGGTCCCATTCTCCACCTGGCCCCAGGCCCA-CTGCTGCTCAGTTTTCTACTGAAACATCTATCCTCTCTATCGACCGACCCCAAATCAATTCCTGTCCACTAG-GTCTCTCAGACGATGGCACAGACAGT----GACTGTCAAAGCAGCCCCGCTGGGGGAGG--------------------TCCCCTT-----------------------------------------------GCTGCCTCTTCCTCCAGAGC---------------------------------------------------------AGCAGGACCTGGGTCACCCAAATCCGGAAAAGCAAGTCTCCAATTAACCATTAACCC-ACACTCACACAGCTGAGACACACACACCCTGCCCTGGGCCTTAGCAAAGTTCTGGGAAAACCCCTGTATGAGCTGAGTCCCTGGCTCTGGGAAATA---CAAGTCATCTTCCTGTCCC i canFam3.chr9 C 0 C 0 a score=2261.000000 s hg38.chr17_GL383563v3_alt 324124 3 + 375691 CTT s panTro4.chr17 300129 3 + 82630442 CTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182399 3 + 73212453 CTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289411 3 - 81552678 CTT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 226569 2 + 80997621 -TC i macFas5.chr16 C 0 I 12 s papAnu2.chr16 209707 2 + 74645514 -TC i papAnu2.chr16 C 0 I 11 s calJac3.chrUn_GL286409 1008444 2 - 1291538 CT- i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75937632 3 + 122082543 CTT i mm10.chr11 C 0 C 0 s canFam3.chr9 15768857 3 - 61074082 CTC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 197938 13 + 75148670 I e rheMac3.chr16 217250 14 + 80904711 I a score=1039791.000000 s hg38.chr17_GL383563v3_alt 324127 354 + 375691 GGAGCCATGAGACCCCGAAACACCTACCGGGAACAGA-GGGGCTTCACCCAGAC-AGGCCCCACCAG------GGAGGAGGAGGCCGCTCTCCCTCCCACCAC-CGTTGTCGGGGGTGACCCGA-GGTGTTCCAGATGAGGAGCTGAATCACTGGGACTTAAGTCAATAAGTGGCAGCCACCAGGCAGGCCCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGAT----GTCTGG-TAAGGCCCCACCA-------CGTAC---------------------CCCAGTCACGTAGTC---TCTAAAACTGA---ACAGATTTGGGACGCTTCCTCTTAGAGG---------GCAGCCCTCTTTGGGACTGTT---AGTCTGGCCACTTTTACA--------CATTTCAAGCA---------TTTTT s panTro4.chr17 300132 352 + 82630442 GGAGCCATGAGACCCCAAAACACCTACCGGGAACGAA-GGGGCTTCACCCAGAC-AGGCCCCGCAAG------GGAGGAGGAGGCCGCTCTCCCTCCCACCAC-CGTTGTCGGGGGTGACCCGA-GGTGTTCCAGATGAGGAGCTGAATCACTGGGACTTAAGTCAATAAGTGGCAGCCACCAGGCAGGCCCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGAT----GTCTGG-TAAGGCCCCACCA-------TGTCC---------------------CCCGGTCACATAGTC---TCTAAAACTGA-----AGACTTGGGACGCTTCCTCTTAGAGG---------GCAGCCCTCTTTGGGACTGTT---AGTCTGGCCACTTTTACA--------CATTTCAAGCA---------TTTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182402 354 + 73212453 GGAGCCATGAGACCCCGAAACACCTACCGGGAATGGA-GGGGCTTCACCCAGAC-AGGCCCCGCGAG------GGAGGAGGAGGCCGCTCTCCCTCCCACCAC-CGTTGTCAGGGGTGACTCGA-GGTGTTCCAGATGAGGAGCTGAATCACTGGGACTTAAGTCAATAAGTGGCAGCCACCAGGCAGGCCCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGAT----GTCTGG-CAAGGCCCCACCA-------CGTCC---------------------CCCAGTCACGTAGTC---TCTAAAACTGA---ACAGACTTGGGACGCTTCCTCTTAGAGG---------GCAGCCCTCTTTCGGAATGTT---AGTCTGGCCACTTTTACA--------CATTTCAAGCA---------TTTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289414 356 - 81552678 GGAGCCATGAGACCCCGAAACACCTACCGGGAACAGA-GGGGCTTCACCCAGAC-AGGCCCCGCGTGGG---AGGAGGAGGAGGCCGCTCTGCCTCCCACCAC-CGTTGTCAGGGGTGACCCGA-GGTGTT-CAGATGAGGAGCTGAATCACTGGGACTTAAGTCAATAAGCGGCAGCCACCAGGCAGGCCCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGAT----GTCTGG-CAAGGCCCCACCA-------CGTCC---------------------CCCAGTCACGTGGTC---TCTAAAACCGA---ACAGACTTGGGACGCTTCCTCTTAGAGG---------GCGGCCCTCTTTGGGAAGGTT---GGTCTGGCCACTTTTACA--------CATTTCAAGCA---------TTTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 217264 361 + 80904711 GGAGCCATGAGACCC--AGACACCTACCGGGAATGGA-GGGGCTTCACCCAGACAAGGCCCCGCACAGG----GGAGGAGGAGGCCGCTCTCCCTCCCACCGC-TGCTGTCAGGGGAGACCCGC-GGCG-TCCAGATGAGGAGCTGAATCACTGGGACTTAAGTCAATAAGTGGCAGCCACCAGGCAGGCCCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGACGCAAGCCAGG-CAAGGCCCCACCA-------CGTCT---------------------CCCAGTCACAGAG-----TCCAAAACTGA---GCAGACTTGGGACGCTTCCTCTTAGACC---------GCAGCCCTCTGTGGGAATGTT---CGTCTGGCCACTTTTACA--------CATTTCAAGCA----TTTTTTTTTT i rheMac3.chr16 I 14 C 0 s macFas5.chr16 226583 359 + 80997621 GGAGCCATGAGACCC--AGACACCTACCGGGAATGCA-GGGGCTTCACCCAGACAAGGCCCCGCACAGG----GGAGGAGGAGGCCGCTCTCCCTCCCACCGC-CGCTGTCAGGGGAGACCCGC-GGCG-TCCAGATGAGGAGCTGAATCACTGGGACTTAAGTCAATAAGTGGCAGCCACCAGGCAGGCCCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGACACAAGCCAGG-CAAGGCCCCACCA-------CGTCT---------------------CCCAGTCACAGAG-----TCCAAAACTGA---GCAGACATGGGACGCTTCCTCTTAGACC---------GCAGCCCTCTGTGGGAATGTT---CGTCTGGCCACTTTTACA--------CACTTCAAGCA------TTTTTTTT i macFas5.chr16 I 12 C 0 s papAnu2.chr16 209720 365 + 74645514 GGAGCCATGAGACCC--AGACACCTACCGGGAACGGA-GGGGCTTCACCCAGACAAGGCCCCGcacagg----ggaggaggaggccGCTCTCCCTCCCACCGC-CGCTGTCAGGGGAGACCCGC-AGCG-TCCAGATGAGGAGCTGAATCACTGGGACTTAAGTCAATAAGTGGCAGCCACCAGGCAGGCTCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGACGCAAGCCAGG-CAAGGCCCCACCA-------CGTCC---------------------CCCAGTCACGGAG-----TCCAAAACTGA---GCAGACTTGGGACGCTTCCTCTTACACC---------GCAGCCCTCTGTGGGAATGTT---CGTCTGGCCACTTTTACA--------catttcaagcttttttttttttttt i papAnu2.chr16 I 11 C 0 s chlSab2.chr16 197951 362 + 75148670 GGAGCCATGAGACCC--AGACACCTACCGGGAACGGA-GGGGCTTCACCCAGACAAGGCCCCGCACAGG----GGAGGAGGAGGCCGCTCTCCCTCCCACCAG-CGCTGTCAGGGGAGACCCGCGGGCGTTCCAGATGAGGAGCTGAATCACCGGGACTTAAGTCAATAAGTGGCAG-CACCAGGCAGGCCCAGCTGGAGCCAAACCAAGGCCTGGATTCT-----CCTC-GTGGACGCAAGCCAGG-CAAGGCCCCACCA-------CGTCC---------------------CCCAGTCACGGAG-----TCCAAAACTGA---GCAGACTTGGGACGCTTCCTCTTAGACC---------GCAGCCCTCTGTGGGAATGCT---CGTCTGGCCACTTTTACA--------CATTTCAAGCA----TTTTTTTTTT i chlSab2.chr16 I 13 C 0 s calJac3.chrUn_GL286409 1008446 345 - 1291538 GGAGCCAGGAGGCCCAGAAACACCTACCAGGAACA-A-GGGGCTTCACCCAGAGGACGCTCCACCTGCG-----------GAGGCCACCCT-CCTCCCACCAG-CGGCGTCAGGAGACAC---A-GGTGTTCCCA--GAGGATCTGAATCACT-GGACTT--GTCAATAAGTGGCAGCCACCAGGCA-GCCCAGCTGGAGCCAAACCAAGGCCTGGACTCT-----CCTC-GTGGATGCGAGCCTGG-CAAGGTCC--CCA-------TGGCC---------------------CCTGGTGACACAGCC--TCCTGAAACTGA---G-GGATTCAGGACACTTTCTCTTAGAGG---------GCAGCCCTCTTACGGAATGTT---CGTCTGGCTGCTTTTACATAT---GTCACATCAAACA----------ATTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75937635 390 + 122082543 AGTACTAGGAGAATCAGAAGCACCTACCAGGAAGCAA-TGGGCCCAGCTGAGAGAGGGTTCCAGGGAGCCCCAGCCAAAGGAGGGC---CTCCCTTGTATGGT-GGTTGCCAAGGGTGACCC-A-GGTGCTGCATATCAACATTTGAGCCACTCTGACTTAACTCAATAAGTAACAGC--CCTGCAAGGCCCAGTTGGAGCCAAACCCAGGCCTGGATTCTCTCTCCCTA-GTGCAGGGAAGCCGGG-CCAAGCCACCCCAGCACTATTGTAC-------TGGAGA--------CCAAGTCCCACAGTG---GCAGCAGCTGACAGACAATTGTGGGGTATTTCCCACCCAAGGCAGAAGCTTACATCCCCTCGCGGATGTGTTTTCAGTCTGGACAC--ATACA--------AATTGGAAACA---------tttgt i mm10.chr11 C 0 I 192 s canFam3.chr9 15768860 391 - 61074082 AGAGCCA-AAGACCCCAAAACACCTACCAGGAACCGAGGGGGCTTCGTCGGGCC-TGACCCTGCTGGCACCCTAGATG-GGAGGTCACTCTCCCTCCCACCACATGTTGTCAGGGGCGACCCTG-AGC----------AAGATCTGAATCACTGAGACTTAAGTCAATAAGAGGCAGTCACTGGGAAGGCTCAGATGGAACCAAACCAAGGCCTGGATTTT-----CCTTGGTGGACTGAAGCCTGGATAAAACCAGCCCA-------TGGCCAGTTTGCTGGTGACCAACCTCCCTGACAACATAGTCTTTTCTAAAACTGA---ACAGACTCAGGACACTTCGTATTAGAGG---------GAGGTCTCCGTGGGGAATGTTTATAATCTTCTCAGTATTATTTTTGTAGTCTGGTCAAGGA---------TATTT i canFam3.chr9 C 0 C 0 a score=82407.000000 s hg38.chr17_GL383563v3_alt 324481 24 + 375691 TGGGTTAGAAAGGGCACATTTTCT s panTro4.chr17 300484 24 + 82630442 TGGGTTAGAAAGGGCACATCTTCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182756 24 + 73212453 TGGGTTAGAAAGGGCACATTTTCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289770 24 - 81552678 TGGGTTAGAAAGGGCACGTTTTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 217625 24 + 80904711 TTGGTTAGAAAGGGCACATTTTCT i rheMac3.chr16 C 0 I 46 s macFas5.chr16 226942 24 + 80997621 TTGGTTAGAAAGGGCACATTTTCT i macFas5.chr16 C 0 I 6 s papAnu2.chr16 210085 24 + 74645514 ttggttagaaaGGGCACATTTTCT i papAnu2.chr16 C 0 I 6 s chlSab2.chr16 198313 24 + 75148670 TTGGTTAGAAAGGGCACATTTTCT i chlSab2.chr16 C 0 I 6 s calJac3.chrUn_GL286409 1008791 24 - 1291538 TTGGTTAGAAAGAGCACATTTTCT i calJac3.chrUn_GL286409 C 0 I 6 s canFam3.chr9 15769251 24 - 61074082 TTTGTTACAAAGGCTACATTTCAC i canFam3.chr9 C 0 I 6 e mm10.chr11 75938025 192 + 122082543 I a score=31877.000000 s hg38.chr17_GL383563v3_alt 324505 21 + 375691 GTATCCAAAACAGCCCTTA--CA-- s panTro4.chr17 300508 21 + 82630442 GTATCCAAAACAGCCCTTA--CA-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182780 21 + 73212453 GTATCCAAAACAGTCCTTA--CA-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289794 21 - 81552678 GTATCCAAAACAGTCCTTG--CA-- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 226972 19 + 80997621 GCATCCAATACAGTCCTTA------ i macFas5.chr16 I 6 C 0 s papAnu2.chr16 210115 19 + 74645514 GCGTCCAATACAGTCCTTA------ i papAnu2.chr16 I 6 C 0 s chlSab2.chr16 198343 21 + 75148670 GCATCCAATATAGTCCTTACA---- i chlSab2.chr16 I 6 I 20 s calJac3.chrUn_GL286409 1008821 21 - 1291538 GTATCCAAAATATTCATTA--CG-- i calJac3.chrUn_GL286409 I 6 C 0 s canFam3.chr9 15769281 23 - 61074082 GTATCCAAAATACTCATTC--TATg i canFam3.chr9 I 6 C 0 e mm10.chr11 75938025 192 + 122082543 I e rheMac3.chr16 217649 46 + 80904711 I a score=-3754.000000 s hg38.chr17_GL383563v3_alt 324526 20 + 375691 ---------GGCAGCAGT-GGTGGTGCATG------------------------------------------------------------------- s panTro4.chr17 300529 20 + 82630442 ---------GGCAGCGGT-GGTGGTGCATG------------------------------------------------------------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182801 20 + 73212453 ---------GGCAGCGGT-GGTGGTGCATG------------------------------------------------------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289815 20 - 81552678 ---------GGCAGCGGT-GGTGGTGCATG------------------------------------------------------------------- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 226991 18 + 80997621 -----------CAGCCGT-GGGGTGGGGAC------------------------------------------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210134 18 + 74645514 -----------CAGCCGT-GGGGGTGGGAC------------------------------------------------------------------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1008842 21 - 1291538 ---------GTCAGTGGTGGGTGGTGCATG------------------------------------------------------------------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15769304 96 - 61074082 ggatgcctgggtggctta-ggggttgagcgtctgctttagactcaggatgtgatcctggagtccagggatcgagtcccacattgggcttcctgcatg i canFam3.chr9 C 0 C 0 e mm10.chr11 75938025 192 + 122082543 I e chlSab2.chr16 198364 20 + 75148670 I e rheMac3.chr16 217649 46 + 80904711 I a score=1047.000000 s hg38.chr17_GL383563v3_alt 324546 6 + 375691 GGGCCT s panTro4.chr17 300549 6 + 82630442 GGGCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182821 6 + 73212453 GGGCGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289835 6 - 81552678 GGGCGT i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 227009 3 + 80997621 GGG--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210152 3 + 74645514 GGG--- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1008863 2 - 1291538 GG---- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75938217 6 + 122082543 GGGCCC i mm10.chr11 I 192 I 3 s canFam3.chr9 15769400 6 - 61074082 gagcct i canFam3.chr9 C 0 C 0 e chlSab2.chr16 198364 20 + 75148670 I e rheMac3.chr16 217649 46 + 80904711 I a score=74445.000000 s hg38.chr17_GL383563v3_alt 324552 23 + 375691 GCGTCAGCATCT-----CATCGCTTCCT s panTro4.chr17 300555 23 + 82630442 GCGTCAGCATCT-----CATCGCTTCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182827 23 + 73212453 GCATCAGCATCT-----CATCGCTTCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289841 23 - 81552678 GCATCAGCATCT-----CATCGCTTCCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 217695 23 + 80904711 GCGTCAGCATCC-----CATCACTTCCC i rheMac3.chr16 I 46 C 0 s macFas5.chr16 227012 23 + 80997621 GCGTCAGCATCC-----CATCGCTTCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210155 23 + 74645514 GCGTCAGCATCC-----CATCGCTTCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198384 23 + 75148670 GCGTCAGCATCC-----CATCGCTTCCC i chlSab2.chr16 I 20 C 0 s calJac3.chrUn_GL286409 1008865 23 - 1291538 ACGTCAGCATCT-----CATAACTTCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75938226 23 + 122082543 TTGTGAGCATCA-----CAGAGCTTACC i mm10.chr11 I 3 C 0 s canFam3.chr9 15769406 28 - 61074082 gcttctccctctgcatatatctctgcct i canFam3.chr9 C 0 I 52 a score=33941.000000 s hg38.chr17_GL383563v3_alt 324575 13 + 375691 GAAGCCCCAGCTG s panTro4.chr17 300578 13 + 82630442 GAAGCCCCAGCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182850 13 + 73212453 GAAGCCCCAGCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289864 13 - 81552678 GCAGCCCCAGCGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 217718 13 + 80904711 GAAGCCCCGGCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 227035 13 + 80997621 GAAGCCCCGGCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210178 13 + 74645514 GAAGCCCCGGCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198407 13 + 75148670 GAAGCCCCGGCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1008888 13 - 1291538 GAAGTCCCAGCGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75938249 7 + 122082543 AGAGTC------G i mm10.chr11 C 0 C 0 e canFam3.chr9 15769434 52 - 61074082 I a score=252567.000000 s hg38.chr17_GL383563v3_alt 324588 105 + 375691 CCTGGAGTGGGGCCCC------------------------TTTTGGGTGTGGCTCTTCAGGAGCAAGGCAAATTGACGCACAGAGAACTTGACGGATG-TGTAAATGGAACAGC-TTCCCGGAGGTACCTC s panTro4.chr17 300591 105 + 82630442 CCTGGAGTGGGGCCCC------------------------TTTTGGGTGTGGCTCTTCAGGAGCAAGGCAAATTGACGCACAGAGAACTTGACGGATG-TGTAAATGGAACAGC-TTCCCGGAGGTACCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182863 105 + 73212453 CCTGGAGTGGGGCCCC------------------------TTTTGGGTGTGGCTCTTCAGGAGGAAGGCAAACTGAAGCACAGAGAACTTGAGGGATG-TGTAAACGGTACAGC-TTCCCGGAGGTACCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 289877 75 - 81552678 CCTGGAGTGGGCCCCT------------------------TTTTGGGTGTGGCTGTTCAGGA-------------------------------GGATG-TGTAAACGGAACACCTTTCCCGGAGGGACCTC i nomLeu3.chr19 C 0 M 1259 s rheMac3.chr16 217731 104 + 80904711 CCTGGACCGGG-CCCC------------------------TTCTGGGGGCGGCTGTTCGGGAGGAAGGCAAACTGAAGCACAGACAACCTGACAGACG-TGCAAACGGAGCAGC-TTCCCGGAGGTGCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 227048 104 + 80997621 CCTGGACCGGG-CCCC------------------------TTCTGGGGGCGGCTGTTCAGGAGGAAGACAAACTGAAGCACAGACAACCTGACAGACG-TGCAAACGGAGCAGC-TTCCCGGAGGTGCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210191 104 + 74645514 CCCAGACCGGG-CCCC------------------------TTCTGGGGGCGGCTGTTCGGGAGGAAGGCAAACTGAAGCACAGACAACCTGACAGACG-TGCAAACGGAGCAGC-TTCCCGGAGGTGCCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198420 104 + 75148670 CCTGGACCGGG-CCCC------------------------TTCTGGGGACGGCTGTTCGGGAGGAAGGCAAACTGAAGCACACATAACCTGACAGACG-TGCAAACGGAGCAGC-TTCCCGGAGGTGCCTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1008901 103 - 1291538 CCGGGAGCGGGGCCCC------------------------TTTGGGGTGTGGCTCTTCAGGAGGAAGGCAAACTCAAGCACAGATAA--TGACCGATGCTGTCAAC-GATCCTC-TTCCAAGAGGCACTTC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75938256 102 + 122082543 CCTGCAGTGGAGCC---------------------------TCTGGCTCTGGCTTCTTGGGAAGAAGGGAAACTGAGGCCCTGACCACTTGAGCAGTG-CAGTAGAAGAACAAA-TCCCCAAAGGCAGCTA i mm10.chr11 C 0 C 0 s canFam3.chr9 15769486 129 - 61074082 TCTAGATAGGGGTCACGCATGAGACACCAGCTTCACATAAGTATGGGTGTAGTTCC-CAGGAAAAAGATAAACTGAGGAACAGGTAACTTGCCCAATGCCATAAATGGAACAGC-CTCCCAAATGTAGCTC i canFam3.chr9 I 52 C 0 a score=30026.000000 s hg38.chr17_GL383563v3_alt 324693 16 + 375691 GAGGAGGGCAAGGGTA s panTro4.chr17 300696 16 + 82630442 GAGGAGGGCAAGGGTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182968 16 + 73212453 GAGGAGAGCAAGGGGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 217835 15 + 80904711 CAGGAGGACAAGGGT- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 227152 15 + 80997621 CAGGAGGACAAGGGT- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210295 15 + 74645514 CAGGAGGACAAGGGT- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198524 15 + 75148670 CAGGAGGACAAGGGT- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009004 14 - 1291538 -CGGAGGGCAAGGGC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75938358 15 + 122082543 GCCCAGCACAGGGGC- i mm10.chr11 C 0 I 59 s canFam3.chr9 15769615 15 - 61074082 AAAGAGGACAAGGAT- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 289952 1259 - 81552678 M a score=114465.000000 s hg38.chr17_GL383563v3_alt 324709 71 + 375691 ATGAAATGAATGAAATGAACCCCTGCACAGCGAGGGAGCACTTACACCCTGACACCCTCCTGC-----AGG-GAGAA s panTro4.chr17 300712 71 + 82630442 ATGAAATGAATGAAATGAACCCCTGCACAGCGAGGGAGCACTTACACCCTGACACCCTCCTGC-----AGG-GAGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 182984 70 + 73212453 ATGAAATGAATGAAATGAACCCTTGCACAGCGA-GGAGCACTTACACCCCGACACCCTCCTGC-----AGG-GAGAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 217850 63 + 80904711 --------AATGAAATGAACCCTGGCACAGCGAGGGAGCGTTTGCAGCCTGACGTCCTCCTGC-----AGA-GAGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 227167 63 + 80997621 --------AATGAAATGAACCCTGGCACAGCGAGGGAGCGTTTGCAGCCTGACGTCCTCCTGC-----AGA-GAGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210310 63 + 74645514 --------AACGAAATGAACCCCGGCACAGCGAGGGAGCGTTTGCAGCCTCACGTCCTcctgc-----aga-gagga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198539 64 + 75148670 --------AATGAAATGAACCCTGGCACAGCGAGGGAACGTTTGCAGCCTGACGTCCTCCTGC-----AGAGGAGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009018 60 - 1291538 --------AATGAAAC-AACCCTCACGT-GCCAGGGAGCGCTTATGCCCTGACAT-CTGCTGC-----AGA-GAGAA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15769630 57 - 61074082 --------AATGGAGTAAGCCCCCGTGTAGCCAGGGATTGTT---------ATATGCTACTGCTGCCTATG-GTG-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75938373 59 + 122082543 I e nomLeu3.chr19 289952 1259 - 81552678 M a score=11925.000000 s hg38.chr17_GL383563v3_alt 324780 3 + 375691 GGA s panTro4.chr17 300783 2 + 82630442 -GA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183054 3 + 73212453 GGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 217913 3 + 80904711 GGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 227230 3 + 80997621 GGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210373 3 + 74645514 gga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198603 3 + 75148670 GGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009078 3 - 1291538 GGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75938432 3 + 122082543 GGA i mm10.chr11 I 59 C 0 s canFam3.chr9 15769687 3 - 61074082 GGA i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 289952 1259 - 81552678 M a score=582835.000000 s hg38.chr17_GL383563v3_alt 324783 202 + 375691 AGATGACAAGGATCTCTCTGTTGACCTTTTCATAGTGCAAACAAGCTACTGATAG--AAAAAAGAAAATGTTTTCATGCTTAAAAAAAAAA----TAAACACCATCAGCAACC-TTTCCCCAT--GGGGAGCAGCAGCAGGTGCTACCACAAGAGAGA--------------------------CAGACAGATGGATATAACTGCCAAGAGGCTCTCAAACT-------GGGTTCCAAGGAGCC s panTro4.chr17 300785 201 + 82630442 AGATGACAAGGATCTCTCTGTTGACCTTTTCATAGTGCAAACAAGCTACTGATAG--AAAAAAGAAAATGTTTTCATGCTT-AAAATAAAA----TAAACACCATCAGCAATC-TTTCCCCAT--GGGGAGCAGCAGCAGGTGCTACCATGAGAGAGA--------------------------CAGACAGATGGATATAATCGCCAAGAGGCTCTCAAACT-------GGGTTCCAAGGAGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183057 203 + 73212453 AGATGACAAGGATCTCTCTGTTGACCTTTTCACAGTGCAAACAAGCTACTGATAGAAAAAAAAGAAAATGTTTTGATGCTT-AAAAAAAAA----TAAACACCATCAGCAACC-TTTCCCCAT--GGGGAGCAGCAGCAGGTGCTACTGCGAGAGAGA--------------------------CAGACCGATGGATATAATCGCCAagaggctctcaaact-------gggttccaaggagcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291211 201 - 81552678 AGATGACAAGGATCTCTCTG-TGACCTTTTCATAGTGCAGACAAGCTACTGATAG--AAAAAAGAAAATGTTTTGATGCTTAAAAAAAAAA----TAAACACCATCAGCAACC-TTTCCCCAT--GGGGAGCAGCAGCAGGTGCTACCGTGAGAGAGA--------------------------CAGACAGATGGATATAATCGCCAagaggctctcaaact-------gggttccaaggagcc i nomLeu3.chr19 M 1259 C 0 s rheMac3.chr16 217916 202 + 80904711 GGATGGCAAGGAGCTCTTTGTTGACCTTTTCATGGTGCCAACAAGCTACTGATGG--AAAAAAGAAAATGTTTTGATGCTTAAAAAAAACAAAACAAAA---CATCAGCAACG-TATCCCCAT---GGGAGCAGCAGCAGGTGCTGCCGAGAGACAGA--------------------------CAGACAGAGGGATATAATCGCCAagaggctctcaaact-------gggatccacggagcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 227233 205 + 80997621 GGATGGCAAGGAGCTCTTTGTTGACCTTTTCATGGTGCCAACAAGCTACTGATGG--AAAAAAGAAAATGTTTTGATGCTTAAAAAAAACAAAACAAAACATCATCAGCAACG-TATCCCCAT---GGGAGCAGCAGCAGGTGCTGCCGAGAGACAGA--------------------------CAGACAGAGGGATATAATCGCCAagaggctctcaaact-------gggatccacggagcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210376 198 + 74645514 ggatgacAAGGATCTCTTTGTTGACCTTTTCATGGTGCCAACAAGCTActgatgg--aaaaaagaaaatgttttgatgcttaaaaaaa-------aaaacatcatcaGCAACG-TATCCCCAT---GGGAGCAGCAGCAAGTGCTGccgagagacaga--------------------------cagacagagggaTATAATCGCCAAGAGGCTCTCAAACT-------GGGATCCACGGAGCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198606 204 + 75148670 GGATGACAAGGATCTCTTTGTTGACCTTTTCATGGTGCCAACAAGCTACTGATGG--AAAAAAGAAAATGTTTTGATGCTTTAAAAAAA-AAAACAAAACATCACCAGCAACG-TATCCCCAT---GGGAGTAGCAGCAGGTGCTGCCGAGAGACAGA--------------------------CAGACAGAGGGATATAATCGCCAagaggctgtcaaact-------gggttccaaggagcc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009081 219 - 1291538 AGATGACAAGGAGCTCCTCGCTGACCTTCTCATAGTGCAAACAAGCTACTG---G--AAAAAAT---GTGTTTTGGTGC--AAAAAAAAAA----AACCCACCATCCGTAACC-TATCCCCAT--GAGGAATAATGGCAGGTGCTagagagagagagaaagagagagaatgaatgagagagagGCAGACAGATGG-TATAATCACCAAGAGGCTCTCACACT-------GGCTTCCAATGAGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75938435 166 + 122082543 GGATGACAAGGAGATCACAAGTGACCTTTTCATA--ACAGACAATCTAGTG------AAGGAAGAAAATGTTTT------------------------------CCAGCAACCTTATCCCCAG---GGAGGTAAAAAACGATTCT-----------GA--------------------------GAGACCAATGAGCATAGCCACCCAACACTTCTCAATCCTCAATCGGGGTTCCAAGGAGCC i mm10.chr11 C 0 I 1598 s canFam3.chr9 15769690 189 - 61074082 AGATGACAAAGATCTCCTCTTTGACCTTTTCATAGTGCAAACAAGTTAATGACAG--AATAAAGATTGTAGT---------AATAAGAAAA----ACACCACAACTAGCAACC-TAATCCCACATGGGGAGCAAAAGCAGATGCCACTG------AAA--------------------------GGGATGGATGGACATAATGAGGAAGAGGTTTTCAAATG-------GGGTTTCAAGGAGCC i canFam3.chr9 C 0 C 0 a score=79415.000000 s hg38.chr17_GL383563v3_alt 324985 75 + 375691 GGGG-TGTGG-AGCCCC-TCTTCAGGACTGTGCAGGT-GAAGCAGGGGGCTGGGAACAA-GGGGGTTATTACAG-------------------------------------------------------------------------------------------------CCCAAc s panTro4.chr17 300986 172 + 82630442 AGGG-TGTGG-AGCCCC-TCTTCAGGACTGTGCAGGT-GAAGCAGGGGGCTGGGAACAA-GGGGGTTATTACAGCCCAATAAACTGGGTTCCAAGGAGCCGGGGGTGTGGAGCCCCTCTTCAGGACTGTACAGGCGAAGCAGGGGGCTGGGAACAAGGCCGGTTATTATAACCCAAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183260 35 + 73212453 agggatgtgg-agcccc-tcttcaggactgtgcaggt-------------------------------------------------------------------------------------------------------------------------------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291412 47 - 81552678 aggggtgtgg-agcacc-tcttcagaaccgtgcacgcagaagcaggggg-------------------------------------------------------------------------------------------------------------------------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 218118 77 + 80904711 aggggtgccg-ggtacc-tcttcaggactgtgcaggtagaagcagggggctgggaacaa-gggggctattacagctcaac------------------------------------------------------------------------------------------------- i rheMac3.chr16 C 0 I 1300 s macFas5.chr16 227438 77 + 80997621 aggggtgccg-ggtacc-tcttcaggactgtgcaggtagaagcagggggctgggaacaa-gggggctattacagctcaac------------------------------------------------------------------------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210574 78 + 74645514 AGGGGTGCCG-GGTACC-TCTTCAGGACTGTGCAGGTACAAGCAGGGGACTGGGAACAAGGGGGGCTATTACAGCTCAAC------------------------------------------------------------------------------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198810 78 + 75148670 aggggtgccg-ggtaccatcttcaggactgtgaaggtagaagcagggggctgggaacaaggagggttattacagctcaa-------------------------------------------------------------------------------------------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009300 77 - 1291538 AGGGGTGCCC-AGTGTC-TCCTTAGAACTGTGCAGGTAGAAGCAGGGG-CTGGGAACAAGGTGGGCTTTTCCAACCCAAC------------------------------------------------------------------------------------------------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15769879 68 - 61074082 ----CTGTCACACCACC-TCTTCAGAGCTGCTGATGT------AGGGTGAAGGGAATAC-AGAATATGTTCCACCCCAAC------------------------------------------------------------------------------------------------- i canFam3.chr9 C 0 I 115 e mm10.chr11 75938601 1598 + 122082543 I a score=4929.000000 s hg38.chr17_GL383563v3_alt 325060 51 + 375691 aaactgggttccaaggagccaggggtgtggagcccctcttcaggaccgtgc s panTro4.chr17 301158 51 + 82630442 aaactgggttccaaggagccaggggtgtggagcccctcttcaggaccgtgc i panTro4.chr17 C 0 C 0 e mm10.chr11 75938601 1598 + 122082543 I e canFam3.chr9 15769947 115 - 61074082 I e calJac3.chrUn_GL286409 1009377 0 - 1291538 C e chlSab2.chr16 198888 0 + 75148670 C e papAnu2.chr16 210652 0 + 74645514 C e rheMac3.chr16 218195 1300 + 80904711 I e macFas5.chr16 227515 0 + 80997621 C e nomLeu3.chr19 291459 0 - 81552678 C e ponAbe2.chr17 183295 0 + 73212453 C a score=142176.000000 s hg38.chr17_GL383563v3_alt 325111 123 + 375691 aagcagaagcagggggctgggaacaagggggtt-------------------------------------------attacagcccaaccca--------------------gagcaactcagctt-tttcctcgtcatctgtcaggcttccaggtaagatttcatttgaagaaaaggtcctgcagt- s panTro4.chr17 301209 123 + 82630442 aagcagaagcagggggctgggaacaagggggtt-------------------------------------------attacagcccaaccca--------------------gagcaactcagctt-tttcctcttcatctgtcaggcttccaggtaagatttcttttgaagaaaaggtcctgcagt- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183295 118 + 73212453 ----agaagca-ggggctgggaacaatggggtt-------------------------------------------attacagcccaacctg--------------------gagcaactcagctt-tttcctcttcatctatcaggcttctaggtaagatttcatttgaagaaaaggtcctgcAGT- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291459 107 - 81552678 ----------------ctgggaacaagggggtt-------------------------------------------attacagcccaaccca--------------------gagcaactcagctt-tttcctcttcatctatcaggcttccaggtaagatttcatttgaagaaaaggtcctgcagt- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 227515 77 + 80997621 -----------------------------------------------------------------------------------------tca--------------------gagcaactcagctt-tttcttcttcatctatcgggcttccaggtaggatttcatttgaagaaaagatcctgcagt- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 210652 77 + 74645514 -----------------------------------------------------------------------------------------TCA--------------------GAGCAACTcagctt-tttcttcttcatctatCAGGCTTCCAGGTAGgatttcatttgaagaaaagATCCTGCAGT- i papAnu2.chr16 C 0 I 311 s chlSab2.chr16 198888 78 + 75148670 ----------------------------------------------------------------------------------------ccca--------------------aagcaactctgctt-tttcgtcttcatctgtcaggcttccaggtaggatttcatttgaagaaaagatcctgcagt- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009377 70 - 1291538 -----------------------------------------------------------------------------------------cca--------------------aagcaactcagcttgtgtccccttcatctatc--------aggtaagatttgatttgaagaaaagatcctgccgt- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770062 180 - 61074082 aggcagagacatgggcagagggagaagcaggctccctgcaaggaacctgatgtgggactcaatcccagatcccaggatcatgccctgagccaaagacagacgctcaaccgctaagccacccaggtg-tcccC-------ATACTGGACTTTCAGGGGAGGTTTCATTTCAAGAAAAGCTTCCATAGCT i canFam3.chr9 I 115 C 0 e mm10.chr11 75938601 1598 + 122082543 I e rheMac3.chr16 218195 1300 + 80904711 I a score=41408.000000 s hg38.chr17_GL383563v3_alt 325234 16 + 375691 aaagatgttgagaagt s panTro4.chr17 301332 16 + 82630442 aaagatgttgagaagt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183413 16 + 73212453 AAAGATGTTGAGAAGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291566 16 - 81552678 aaagatgttgagaagt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 227592 16 + 80997621 aaaaaagttgagaagt i macFas5.chr16 C 0 I 312 s papAnu2.chr16 211040 16 + 74645514 aaaaaagttgagaagt i papAnu2.chr16 I 311 C 0 s chlSab2.chr16 198966 16 + 75148670 aaaaaCGCTGAGAAGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009447 16 - 1291538 aaaaaTGTTGAGAGGT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770242 16 - 61074082 CACAATGTTGAGGAGT i canFam3.chr9 C 0 C 0 e mm10.chr11 75938601 1598 + 122082543 I e rheMac3.chr16 218195 1300 + 80904711 I a score=87376.000000 s hg38.chr17_GL383563v3_alt 325250 35 + 375691 gctgATATGCGCTGCTGGTTATATGAAAGGGTGGA s panTro4.chr17 301348 35 + 82630442 gctgATATGCGCTGCTGGTTATATGAAAGGGTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183429 35 + 73212453 GCTGATATGCGCTGCTGGTTATATGAAAGGGTGGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291582 35 - 81552678 gctgATATGCACTGCTGGTTATATGAAAGGGTGGA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 227920 35 + 80997621 gctgATATGTGCTTCTGGTTATATGAAAGGGTGGA i macFas5.chr16 I 312 C 0 s papAnu2.chr16 211056 35 + 74645514 GCTGATATGTGTTTCTGGTTATATGAAAGGGTAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 198982 35 + 75148670 GCTGACATGTGCTGCTGGTTATATGAAAGGGTGGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009463 26 - 1291538 GCTGATAT---------GTTATATGAAAGTGTGGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770258 35 - 61074082 GCTGATGTGTGATACTGGTTGTATCAAATAGGGGA i canFam3.chr9 C 0 I 22 e mm10.chr11 75938601 1598 + 122082543 I e rheMac3.chr16 218195 1300 + 80904711 I a score=652359.000000 s hg38.chr17_GL383563v3_alt 325285 301 + 375691 AGGAGGACTggcacggtggctcactcctgtaaccccagctactccagaggccgaggcgggt-ggatcacctaaggtcaggagttcgagaccagcctggccaacatagtaaaaacccatctctactgaaaatacaaaaattagccaggtgtggtggcaaatgtctgtagccccagccattcaggaggctgaggtgggagggtggctggagtctaggagtttgaggctgctgtgagccatgatctagccaccgtactccagcctaggtgacagagtgagacctcgccttaaaatttgaaaaata s panTro4.chr17 301383 301 + 82630442 AGGAggctgggcacggtggctcactcctgtaaccccagctactccagaggccaaggcgggt-ggatcacctaaggtcaggagttcgagaccagcctggccaacatagtaaaaacccatctctactgaaaatacaaaaattagccaggtgtggtggcaaatgtctgtagccccagccattcaggaggctgaggtgggagggtggcttgagtctaggagtttgaggctgctgtgagccatgatctagccactgtactccagcctaggtgacaaagtgagacctcaccttaaaatttaaaaaata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183464 301 + 73212453 AGGAggccgggcgcggtggctcactcctgtaaccccagctactccggaggccaaggcgggt-ggatcacctgaggtcaggagtttgaaaccagcctggccaacatggtaaaaacccatctctactgaaaatacaaaaattagccaggtgtggtggcaaatgtctgtagccccagccattcaggaggctgaggtgggagggtggcttgaacccaggagtttgaggctgctgtgagctatgatccagccaccgtactccagcctaggtgacagagtgagacctcgccttaaaatttaaaaaata i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291617 301 - 81552678 AGGAggccgggagtggtggctcatgcctgtaactccagctactcaggaggccaaggtgggt-ggatcacctgagatcaggagtttgagacccgcctggccaacacggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgtggtggcaaaagtctgtagccccagccattcaggaggctgaggtgggagggtggcttgagtgtaggagtttgaggctgctgtgagccacgatctagccatcgtactccagcctaggtgacagagtgagacctcgccttaaaatttaaaaaatg i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 227955 298 + 80997621 AGGAggcc-ggtgcagtggctcacacctgtaaccccagctactcaggaggctgaggcgggc-ggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaacacacaaaaattagccgggcgtggtggcaatga--tgtagccccagccattcaggaggctgaggtgggagaggggcttgagcccaggagtttgaggctgctgtgagccatgatctagccaccgtactccagcctcggtgacagagtgagaccttgtcttaaattttaaaaaata i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211091 299 + 74645514 Aggaggcc-ggtgcagtggctcacgcctgtaaccccagctactcaggaggctgaggcgggcaggatcacctgaagtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaatacataaaaattagtcgggcttggtggcaatgg--tgtagtcccagccattcaggaggctgaggtgggaggggggcttgagcccaggagtttgaggctgttgTGAGCCATGATCTAACCTCcgtactccagcctcggtgacagagtgagaccttgtcttaaaatttaaaaaata i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 199017 298 + 75148670 AGGAggcc-ggtgcagtggctcacgcctgtaaccccagctactcaggaggctgaggcgggc-ggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctatctctactaaaaacacaaaaagtagccgggcttggtggcaatgg--tgtagccccagccattcaggaggctgaggtgggaggggggcttgagcccaggagtttgaggctgctgtgagccatgatctagccaccgtactccagcctcggtgacagagtgagaccttgtcttaaaatttaaaaaaTA i chlSab2.chr16 C 0 I 131 s calJac3.chrUn_GL286409 1009489 296 - 1291538 AGGAGGCCAGGCATG-----tcatgcctctaacctcagctacttgggaggccgaggcaggt-ggatcacctgaggccaggaatttgagaccagcctggccaacatggcaaaactccgtctctactaaaaatacaaaaattagccaggtgtggtggcaaacatctatagtcccagccattcaggaggctgaggtgggaggatggcttgagcccaggagtctgaggctgctgtaagtcatgatctagccaccatactccagctgaggtaagagagtgagaccttgtcttaaaattagaaaaata i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75938601 1598 + 122082543 I e canFam3.chr9 15770293 22 - 61074082 I e rheMac3.chr16 218195 1300 + 80904711 I a score=111182.000000 s hg38.chr17_GL383563v3_alt 325586 69 + 375691 aaataaaaTTCATGGGTAggccaggcatagtggctcacgcctgtaaccctagcacttgggaaggctgag s panTro4.chr17 301684 69 + 82630442 aaataaaaTTCATGGGTAggccaggcatagtggctcacgcctgtaaccctagcactttgggaggctgag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183765 69 + 73212453 aaataaaaTTCACAGGTAggccaggcacagtggttcacgcctgtatccctagcactttgggaggctgag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291918 69 - 81552678 aaaTACAATTCATAGGTAggccaggcacagcggctcacgcctctaaccctagcactttgggaggctgag i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 228253 69 + 80997621 aaataaaaTTCATAGGGAggccaggcacaatggctcacgcctgtaaccctagcaccttgggaggccgag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211390 69 + 74645514 aaataaaattcatagggaggccaggcacaatggctcacgcctgtcaccctagcaccttgggaggccaag i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1009785 69 - 1291538 aaataaaaTTCCTTGGTTgaccaggcatagtggctcacacctataaccccagtactttgggaggctgtg i calJac3.chrUn_GL286409 C 0 I 33 e mm10.chr11 75938601 1598 + 122082543 I e canFam3.chr9 15770293 22 - 61074082 I e chlSab2.chr16 199315 131 + 75148670 I e rheMac3.chr16 218195 1300 + 80904711 I a score=309207.000000 s hg38.chr17_GL383563v3_alt 325655 179 + 375691 gcttggcca-------------------------------------------gacatgg-tcgtgggcaactgtcgtcccaactactcgggaggc----tgaggcaggagaatcgcttgaacccggaaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggca--acagagcgagactccgactcaaa------aaaaaaagaaagaaagaAAGAAAGT- s panTro4.chr17 301753 179 + 82630442 gcttagcca-------------------------------------------gacatgggtggtgggcacctgtcgtcccaactactcgggaggc----tgaggcaggagaatggcatgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgtactccagcctgggcg--acagagcgagactccgactcaaa------aaaaaaaaaaa-aaagaaAGAAAGG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 183834 174 + 73212453 gcttagcca-------------------------------------------gacgtgg-tggtgggcacctgtcgtcccaactactcaggaggc----tgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccaagatcacgccattggactccagcctgggcg--acagagcgagactccgtctcaaa------aaaaaaa-----aaagaaagaaAGG- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 291987 178 - 81552678 gcttagcca-------------------------------------------gacgtgg-tggcgggcacctgtcatcccaactactcgggaggt----tgaggcaggagaattgcttgaacccgggaggcagaagttgcggagagccgagatcgtgccactgcactccagcctgggcg--acagagggagactctgtctcaaa------aaaaaaaaaaa-aagagaAGAAAGG- i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 228322 185 + 80997621 gcttagcca-------------------------------------------ggcatgg-tcctgggcccctgtcgtcccagctactcaggaggcttcatgaagcaggagaatctcttgaacccaggaggtggagcttgcagtgagccaagatcgtgccattgcactccagcctgggcgacacagagagagagtccgtatcaaa------aaaagagaaGGGAAGGGAAGGGAAG- i macFas5.chr16 C 0 I 7 s papAnu2.chr16 211459 186 + 74645514 gcttagcca-------------------------------------------ggcatgg-tcctGGGcccctgtcgtcccagctactcaggaggc----tgaagcaggagaatctcttgaacccaggaggtggagcttgcagtgagccaagatcgtgccattgcactccagcctggacgacacagagagagagtccgtatcaaa-aaaagaaaagagaagaggagagaagagaag- i papAnu2.chr16 C 0 I 7 s chlSab2.chr16 199446 187 + 75148670 gcttagcca-------------------------------------------ggcatgg-tcgtgggcccctgtcgtcccagctactcaggaggc----tgaagcaggagaatctcttgaacccaggaggtggagcttgcagtgagccaagatcgtgccattgcattccagcctgggcgacacagagagagactccgtatcaaaaaaaaaaaaagaaaagaaaagaaaaaaaaag- i chlSab2.chr16 I 131 I 9 s calJac3.chrUn_GL286409 1009887 218 - 1291538 gcctgtccaacacggcaaaacctgcctctaacaaaaatccaaaaatgactggggcatgg-ccatgggtgtctgcagtctcagctacctgggaggc----tgaggcaggagatttgcctgaacctgaaaggtggaggttgcagtgagccaatattgcaccaatacactccagcccacgca--aaagagcaagact--gtctcaaa------aaaaaaaga---aagaaaagaaaaGG i calJac3.chrUn_GL286409 I 33 C 0 e mm10.chr11 75938601 1598 + 122082543 I e canFam3.chr9 15770293 22 - 61074082 I e rheMac3.chr16 218195 1300 + 80904711 I a score=113315.000000 s hg38.chr17_GL383563v3_alt 325834 45 + 375691 GTGGAATGTGCTGGAAGCCATCTCTGAGTGTGCGGGACCACACAC s panTro4.chr17 301932 45 + 82630442 GTGGAATGTGCTGGAAGCCGTTTCTGAGTGTGCGGGACCACACGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184008 45 + 73212453 GTGGAATGTGCTGGAAGCCACCTCTGAGTGTGCGGGACCACACGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 292165 45 - 81552678 GTGGAACGTGCTGGAAGCCATCTCTGAGTGTGCGGGACCACACGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 219495 45 + 80904711 GTGGAATGTGCTAGCAGCCGTCTCTGAGTGAGCGGGACCCCACAC i rheMac3.chr16 I 1300 I 46 s macFas5.chr16 228514 40 + 80997621 GTGGAATGTGCTAGCAGCCGTCTCTGAGTGAGCGGGACCC----- i macFas5.chr16 I 7 I 2 s papAnu2.chr16 211652 40 + 74645514 gTGGAATGTGCTAGCAGCCATCTCTGAGTGAGCGggaccc----- i papAnu2.chr16 I 7 I 4 s chlSab2.chr16 199642 45 + 75148670 GTGGAATGTGCTAGCAGCCGTCTCTGAGTGAGCGGGACCCCACAC i chlSab2.chr16 I 9 I 56 s calJac3.chrUn_GL286409 1010105 45 - 1291538 GTGGAATGTGCTAGAAGCTGTCTCTGAATGTGCAGCACCACACAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75938601 1598 + 122082543 I e canFam3.chr9 15770293 22 - 61074082 I a score=3465.000000 s hg38.chr17_GL383563v3_alt 325879 18 + 375691 CACACACATACCAAGGCC s panTro4.chr17 301977 18 + 82630442 CACACACATACCCAGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184053 6 + 73212453 CACACA------------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 292210 6 - 81552678 CACACA------------ i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 228556 6 + 80997621 CACACA------------ i macFas5.chr16 I 2 C 0 s papAnu2.chr16 211696 6 + 74645514 cacaca------------ i papAnu2.chr16 I 4 C 0 e mm10.chr11 75938601 1598 + 122082543 I e canFam3.chr9 15770293 22 - 61074082 I e calJac3.chrUn_GL286409 1010150 0 - 1291538 C e chlSab2.chr16 199687 56 + 75148670 I e rheMac3.chr16 219540 46 + 80904711 I a score=58775.000000 s hg38.chr17_GL383563v3_alt 325897 83 + 375691 TGTGGGAGACCCGCACACCACAGCCCCAGGCCTGCAGG-AATCAGCTGGT-CTTTGTCCTGCTCATGCACTCCGTG--TAGAAGAAA s panTro4.chr17 301995 83 + 82630442 TGTGGGAGACCCGCGCACCACACCCCCAGGCCTGCAGG-AATCAGCTGGT-CTTTGTCCTGCTCATGCGCTCCGTG--TAGAAGAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184059 61 + 73212453 ------------------------CCCAGGCCTGCGAG-AATCAGCTGGT-CTTCGTCCTGCTCGTGTGCTCCATGTTTAGAAGAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 292216 61 - 81552678 ------------------------CCCAGGCCTGCAGG-AATCACCTGGT-CTTCGTCCTGCTCGTGCGCTCCGCGTTCAGAAGAAA i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 228562 43 + 80997621 ------------------------CC--------CAGGCAATCAGCTGGT-CTCCGTCCTGCACGTGTGCCGTGTG----------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211702 51 + 74645514 ------------------------cccaggcgTGCAGGCAATCAGCTGGT-CTCCGTCCTGCACATGTGCCGTGTG----------- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010150 61 - 1291538 -------------------------CCCAGTGTGCAGGAAATCAGCTGGT-ATTCATTCTGCTCATGTGCTCCATGTTGAAAAGCAA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770315 87 - 61074082 TGTGGGGGAAGCAGCTGCTACATACCCAGGTATGCTGGAAACTAGCTGGTCCTTCATCCTGAGGGTAGGCTCTGAGTTTAGGAAAAA i canFam3.chr9 I 22 C 0 e mm10.chr11 75938601 1598 + 122082543 I e chlSab2.chr16 199687 56 + 75148670 I e rheMac3.chr16 219540 46 + 80904711 I a score=28056.000000 s hg38.chr17_GL383563v3_alt 325980 12 + 375691 TGCAGAAGAGAA s panTro4.chr17 302078 12 + 82630442 TGCAGAAGAGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184120 12 + 73212453 TGCAGAAGAGAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 292277 12 - 81552678 TGCAGAAGAGAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 219586 12 + 80904711 TGCAGCAGAGAT i rheMac3.chr16 I 46 C 0 s macFas5.chr16 228605 12 + 80997621 TGCAGCAGAGAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211753 12 + 74645514 TGCAGAAGAGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 199743 12 + 75148670 TGCAGAACAGAC i chlSab2.chr16 I 56 C 0 s calJac3.chrUn_GL286409 1010211 12 - 1291538 TGCAGGGGAGAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770402 7 - 61074082 TGAAGAA----- i canFam3.chr9 C 0 C 0 e mm10.chr11 75938601 1598 + 122082543 I a score=296410.000000 s hg38.chr17_GL383563v3_alt 325992 82 + 375691 GCCTCCTTTGCCAGGGTCCAGCCAGGCCACGCTGCTCTTCCCCTGGCAGGACCACAGGTCGGGAGGACCAAGCTCAGAAACG s panTro4.chr17 302090 82 + 82630442 GCCTCCTTTGCCGGGGTCCAGCCAGGCCACGCTGCTCTTCCCCTGGCAGGACCACAGGTCGGGAGGACCAAGCTCAGAAACG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184132 82 + 73212453 GCCTCCTTTCCCGGGGTCCAGCCAGGCCACGCTGCTCTTCCCCTAGCAGGACCACAGGCCGGGAGGACCAAGCTCAGAAACG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 292289 82 - 81552678 GCCTCCTTTGCCGGGGTCCAGCCAGGCCACTCTGCTCTTCCCCTGGCAGGACCACAGGCCACGAAGACCAAGCTCAGAAATG i nomLeu3.chr19 C 0 M 1523 s rheMac3.chr16 219598 82 + 80904711 GCCTCCTTTGCCAGGGCCCGGCCTGGCCACTCTGCTCTTCCCCTGGCAGGACCACAGGCCGGGAGGACCAAGTTCAGAAACG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 228617 82 + 80997621 GCCTCCTTTGCCAGGGCCCGGCCTGGCCACTCTGCTCTTCCCCTGGCAGGACCACAGGCCGGGAGGACCAAGTTCAGAAACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211765 82 + 74645514 GCCTCCTTTGCCAGGGCCCAGCCTGGCCACTCTGCTCTTCCCCTGGCAGGACCACAGGCCAGGAGGACCAAGTTCAGAAACG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 199755 82 + 75148670 GCCTCCTTCGCCAGGGCCCAGCCTGGCCACTCTGCTCTTCCCCTGGCAGGACCACAGGCCGGGAGGACCAAGTTCAGAAACA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010223 82 - 1291538 GCGACCCTTCACAGGGTCCTGCCTGACCACTCTCCCCGTCCCCTGGCAGGACCACAGGCCAGGAGGACCAAGTCCACAAACA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75940199 80 + 122082543 GCCTCCTTTGTCGGGGCCCAGCCTGGCTGCTCTGTCCATTCCCT-GCAGCTCCACCTACCAGATGGACC-TGTCCACAAACT i mm10.chr11 I 1598 I 1 s canFam3.chr9 15770409 65 - 61074082 -CCTCCTTCGCCA-GGTCCAGCCTGGCCACT-TGCCCTTCCCCTGGCAGGACCACAGGCTGGA--------------AAATA i canFam3.chr9 C 0 C 0 a score=114414.000000 s hg38.chr17_GL383563v3_alt 326074 48 + 375691 CAAATGACACCAA-ATCAAGTGGAGCCTCGAGCCAAGTGAAGCTTCTGG s panTro4.chr17 302172 48 + 82630442 CAAATGACACCAA-ATCAAGCGGAGCCTCGAGCCAAGTGAAGCTTCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184214 48 + 73212453 CAAATGACACCAA-GTCAAGCAGAGCCTTGAGCCAAGTGAAGCTTCTGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 219680 48 + 80904711 CAAGTGACACCAA-ATCAAGCAGATGCTTGAGCCAAGTCAAGTATCTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 228699 48 + 80997621 CAAGTGACACCAA-ATCAAGCAGATGCCTGAGCCAAGTCAAGTTTCTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211847 48 + 74645514 CAAGTGACACCAA-ATCAAGCAGATGCTTGAGCCAAGTCAAGTTTCTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 199837 48 + 75148670 CAAGTGACACCAA-ATCAAGCAGATGCCTGAGCCAAGTCAAGCTTCTGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010305 48 - 1291538 CAGGGGACACCAA-CTGAAGCTGAGTCTTGAGCCAAGTCAAGCATTTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75940280 47 + 122082543 TAGGTAACACCAACATCTGGTTGTGATCTGAGCCAAGATGAGCATCT-- i mm10.chr11 I 1 C 0 s canFam3.chr9 15770474 48 - 61074082 CAGGTGACACCAAAATCAAGCCAAGCTTAGAGCTAAGTCTAGATCCAT- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 292371 1523 - 81552678 M a score=217372.000000 s hg38.chr17_GL383563v3_alt 326122 72 + 375691 AAAAGAGACT-TGAA-CCCAGcagggacaggggctcgatgcagacgtcagagccagaggtgtggatccagagac s panTro4.chr17 302220 72 + 82630442 AAAAGAGACT-TGAA-CCCAGCAGGGACAGGGGCTCGATGCAGACGTCAGAGCCAGAGGTATGGATCCAGAGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184262 72 + 73212453 AAAAGAGACT-TGAA-CCCAGCAGGGACAGGGGCTCAATGCAGACATCAGAGCCAGAGGCGTGGATCCAGTGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 293894 73 - 81552678 AAAAGAGACT-TGAACCCCAGCTGGGACAGGGGTTCCATGCAGACATCAGAGCCAGAGGTGTGGATCCAGAGAG i nomLeu3.chr19 M 1523 C 0 s rheMac3.chr16 219728 72 + 80904711 AAAAGAGACT-TGAA-CCCAGCAGGGACAGGGGCTCGATGCAGACGTCAGGGCCAGACGTGCAGATCCAGAGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 228747 72 + 80997621 AAAAGAGACT-TGAA-CCCAGcagggacaggggctcgatgcagacgtcagggccagacgtgcagatccagagac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211895 72 + 74645514 AAAAGAGAGT-TGAA-CCCAGCAGGGACAGGGGCTTGATGCAGACGTCAGGGCCAGACGTGCAGATCCAGAGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 199885 72 + 75148670 AAAAGAGACT-TGAA-CCCAGCAGGGACAGGGGCTCGATGCAGACGTCAGGGCCAGACGTGCGGATCCAGAGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010353 69 - 1291538 AAAAGAGACT-TGAGCCCCAGCAGGG-CAGGGGC-CGACGTTGGCATCAGAGCCAGATGTATGCA--CACAGCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75940327 70 + 122082543 CAAAGAGACCATGAG-CCTGGCAAGGAGAGGTGCAAAGAGCAAGTG---GTGCTAGGGGCCAGCATCCTGGGAC i mm10.chr11 C 0 I 643 s canFam3.chr9 15770522 71 - 61074082 AAAGGAGATT-CAAACCTCGACAGGAACAGG-GCCAAATGCAGACATCAGAGTCAGATTTGTGAATCCCAGGC- i canFam3.chr9 C 0 C 0 a score=502474.000000 s hg38.chr17_GL383563v3_alt 326194 189 + 375691 cagaggccaaagAGATGTGATAAACTATGTCAG-TGACTGGAGCCGACCCTGGTCAGTCCCTGGGGCAGGCATGGCAGCAAGAGGCTGGTTTCCACATGTGCCCAG-AGTTTGCTTCATGGA-AAGGCCAGCTCTGCGCAAAGGTCCAGGGGGGACCAGTCACGAAGGTGTGAAGAGGCCTGA-----------------------------------GTGTTTGTC s panTro4.chr17 302292 189 + 82630442 CAGAGGCCAAAGAGACGTGATAAACTATGTCAG-TGACTGGAGCCGACCCTGGTCAGTCCCTGGGGCAGGCATGGCAGCGAGAGGCTGGTTTCCACGTGTGCCCAG-AGTTTGCTTCATGGA-AAGGCCAGCTCTGCGCGAAGGTCCAGGGGGGACCAGTCACGAAGGTGTGAACAGGCCTGA-----------------------------------GTGTTTGTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184334 189 + 73212453 CAGAGGCCAAAGAGACGTGATAAACTATGTCAG-TGACTGGAGCCGACCTTGGTCAGTCCCTGGGGCAGGCATGGCAGCGAGAGGATGGTTTCCACGTGTGCCCAG-AGTTTGCTTCATGGA-AAGGCCAGCTCTGCGCGAAGGTCCAGGGGGGACCAGTCACGAAAGTGTGAAGAGGCCTGA-----------------------------------GTGTTTGTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 293967 188 - 81552678 CAGAGGCCAAAGAAACGTGATAAACTGTGTCCG-TGACTGGAGTCGACCCTGGTCAGTCCCTGGGGCTGGCATGGCAGCGAGAGGCTGGTTTCCACGTGTACCCAG-AGGTTGCTTCATGGA-AAGGCTAGCTCTGCGCGAAGGTCC-GGGGGGACCAGTCACGAAGGTGTGAAGAGACCTGA-----------------------------------GTGTTTGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 219800 187 + 80904711 CAGAGGCCAGAGACACGGGA-GGACTGTGTCGG-CGACCGGAGCTGATCTCGGTCGGTCCCTGGGGCGGGCACGGCCGCGAGAGGCTGGTTTCCACGTGTGTCCAG-AGGTTGCTTCATGGA-GAGGCCAGCTCTGC-TGAAGGTCCAGGGGGCACCAGTCACGAAGGTGTGACGAGCCCTGA-----------------------------------GTGTTTGTC i rheMac3.chr16 C 0 I 664 s macFas5.chr16 228819 187 + 80997621 cagaggccagagACACGGGA-GGACTGTGTCGG-CGACCGGAGCTGATCTCGGTCGGTCCCTGGGGCGGGCACGGCCGCGAGAGGCTGGTTTCCACGTGTGTCCAG-AGGTTGCTTCATGGA-AAGGCCAGCTCTGC-TGAAGGTCCAGGGGGCACCAGTCACGAAGGTGTGACGAGCCCTGA-----------------------------------GTGTTTGTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 211967 183 + 74645514 CAGAGGCCAGAGACACGGGA-GGACTGTGTCGG-CGACCAGAGCTGATCTCGGTCGGTCCCTGGGGCAGGCACGGCCGCGAGAGGCTGGTTTCCACGTGTGTCCAG-AGGTTGCTTCATGGA-AAGGCCAGCTCTGC-TGAAGGTCCAGGGGGCACCAGTCACGAAGGTGTGACGAGCCCTGA-----------------------------------GTGTC---- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 199957 188 + 75148670 CAGAGGCCGAACAGACGGGA-GGACCGTGTCGG-CGACCGGAGCTGATCTCAGTCGGTCCCTGGGGCAGGCACGGCCGCGAGGGGCTGGTTTCCACGTGTGTCCAG-AGGCTGCTTCATGGA-AAGGCCAGCTCTGTGTGAAGGTCCAGGGGGCACCAGTCACGAAGGTGTGATGAAGCCTGA-----------------------------------GTGTTTGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010422 186 - 1291538 CAGAGGCCAAAGGTATGTGAGAGACCCTGTCCA-TGACGGGAGCTGATCTGGGTCAGTCACTGGGGCAGGCATGGTGGCTACAGGCTAGTTT-CACCTGTGCCCAG-AGGTCACTTCACAGA-AAGGCCACGTCTGTGGGAAGGTCCAGGGTGGACCAGTCACCAAGCTATAAAGAGGC--GA-----------------------------------GTGTTCGCC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770593 201 - 61074082 CAGAAGCCAAAGAGCCACAAGAAGTGGGGTCAGTTGAGTGGAGACA------------CCCTAGGGCACACACAGTGGAGAAAGGTTGGTTTCCACATGCCCCTagcagcttgctgcctgcagaaggccag--------------cctggatgaaccagacctgaggatatgaagaggcctgacttcctgcatggagcctgcttctccctctgcctgtgtctctgcc i canFam3.chr9 C 0 C 0 e mm10.chr11 75940397 643 + 122082543 I a score=24198.000000 s hg38.chr17_GL383563v3_alt 326383 18 + 375691 --------------TTCCATTCAGCTGAGAAA------------ s panTro4.chr17 302481 18 + 82630442 --------------TTCCGTTCAGCTGAGGAC------------ i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184523 18 + 73212453 --------------CTCCGTACAGCTGAGAAC------------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294155 18 - 81552678 --------------CTCTGTACAGCTGAGAAC------------ i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 229006 18 + 80997621 --------------CTCTGCACAGCTGAGAAC------------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 212150 18 + 74645514 --------------CTCTGCACAGCTGAGAAC------------ i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 200145 18 + 75148670 --------------CTCTGCACAGCTGAGAAT------------ i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010608 18 - 1291538 --------------ATCCATACAGCTGAGAGC------------ i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770794 44 - 61074082 tctctcttcgctctctctgaatgaataaataatctttaaaaaaa i canFam3.chr9 C 0 C 0 e mm10.chr11 75940397 643 + 122082543 I e rheMac3.chr16 219987 664 + 80904711 I a score=728.000000 s hg38.chr17_GL383563v3_alt 326401 3 + 375691 -GGC s panTro4.chr17 302499 3 + 82630442 -GGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184541 3 + 73212453 -AGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294173 3 - 81552678 -GGC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 212168 3 + 74645514 -GGC i papAnu2.chr16 C 0 I 82 s chlSab2.chr16 200163 3 + 75148670 -GGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010626 3 - 1291538 -TGC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15770838 3 - 61074082 aAA- i canFam3.chr9 C 0 C 0 e mm10.chr11 75940397 643 + 122082543 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=31574.000000 s hg38.chr17_GL383563v3_alt 326404 44 + 375691 AGAACGCCGCCAC----------------------------------ACTGCTGCACAGACGGCACCTTCT-----ACACCTT- s panTro4.chr17 302502 44 + 82630442 AGAACGCCGCCAC----------------------------------ACTGCTGCGCAGACGGCACCTTCT-----ACACCTT- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184544 44 + 73212453 AGAACGCCGCCAC----------------------------------ACTGCTGCGCAGACAGCACCCTCT-----ACACCTT- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294176 44 - 81552678 AGAACGCCGCCAC----------------------------------ACTGCTGTGCAGACGACACCTTCT-----ACCCCTT- i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 200166 43 + 75148670 AGAACGCAGCCAC----------------------------------ACTGCCGTGCAGATGGCACCTTC------ACAACTT- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1010629 78 - 1291538 AGGAGGCTGCCACAGTGCTTTGCAGACAGCAGAGCCACAGAATCCAGACAGCTGTGTAGACAGCACCTTCT-----ACACCCT- i calJac3.chrUn_GL286409 C 0 I 1050 s canFam3.chr9 15770841 46 - 61074082 AAAATGAAGAGGC--------------------------------------CTGAGTGGGCATATTCCTCCCAAAAGCAACAGA i canFam3.chr9 C 0 C 0 e mm10.chr11 75940397 643 + 122082543 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=15741.000000 s hg38.chr17_GL383563v3_alt 326448 16 + 375691 TACACTCCTCACACTG s panTro4.chr17 302546 16 + 82630442 TACACTCCTCACACTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184588 16 + 73212453 TACACCCCTCACACTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294220 16 - 81552678 TACACCCCTCACACTC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 200209 14 + 75148670 TACACCCCTCACA--G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1011757 15 - 1291538 TACAC-CCTCACACTG i calJac3.chrUn_GL286409 I 1050 C 0 s canFam3.chr9 15770887 15 - 61074082 CATGCTCC-CATGCTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75940397 643 + 122082543 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=499065.000000 s hg38.chr17_GL383563v3_alt 326464 382 + 375691 AGCTCCAGGGTCCGGACAGCTGTGCACCTGCCA------------------CCTTTAGCAAAGCGAAGGCCAGGGGCCCCTGCTGGCCTTCTGCAATGGGCATATATTTTGTCTACCCAGCATTCCTTTCCTT--TTTGAGAATAACTCTT----CAGGTCAAAGTAGTCACGCCCAGTCTTCCTGGGCAAGAG------------------AAACAG-CCCCTCCTTCCCCTTCTTCCTGGGTGAATGTGA-TGAGGAtgaccaattagaatagcc-----------ccacccccaaggcagggtaattggctcagggctg----ggcatgtgacccagacccagccatactgagtcctcct------ggggtcttgccagagttcctgtgcaataaacccactgt----------------------------------------------ctggga-------------------------cggtaagc-----------acggcactagctcacgatggccagta s panTro4.chr17 302562 382 + 82630442 AGCTCCAGGGTCTGGACAGCTGTGCACCTGCCA------------------CTTTTAGCAAAGCGAAGGCCAGGGGCCCCTGCTGGCCTTCTGCAATGGGCATAAATTTTGTCTACCCAGCATTCCTTTCCTT--TTTGAGAATAACTCTT----CAGGTCAAAGTAGTCACGCCCAGTCCTCCTGGGCAAGAG------------------AAACAG-CCCCTCCTTCCCCTTCTTCCTgggtgaatgtga-tgaggatgaccaattagaatagcc-----------ccaccccctaggcagggtaattggctcagggctg----ggcatgtgacccagaaccagccatactgagtcctcct------ggggtcttgccagggttcctgtgaaataaaCCCACTGT----------------------------------------------CTGGGA-------------------------CGGTAAGC-----------AGGGCACTAGCTCACGATGGCCAGTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 184604 382 + 73212453 GGCTCCAGGATCCGGACAGCTGTGCACCTACCA------------------CCTTCAGCAAAGCGAAGGCCAGGGGCCCCTGCTGGCCTTCTGCAATGGGCATATATTTTGTCTACCCAGCGTTCCTTTCCTT--TTTGAGAATAACTCTT----CAGGTCAAAGTAGTCACGCCCAGTCCTCCCGGGCAAGAG------------------AAACAG-CCCCTCTTTCGCCTTCTTCCTGGGTGAATGTGA-TGAGGATGACCAATTAGAATAGCC-----------CCACCCCCTAGGCAGGGTAATTGGCTCAGGGCTG----GGCATGTGGCCCAGACCCAGCCATACTGAGTCCTCCT------GGGGTCTTGCCAGAGCTCCTGTGAAAAAAACCCACTGT----------------------------------------------CTGGGA-------------------------CAGTAAGC-----------ACAGCACTAGCTCAAGATGGCCAGTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294236 381 - 81552678 AGCTCCAGGGTCCGGACAGCTGTGCACCTACCA------------------CCTTCAGCAAAGCGAAGGCT-GGGGCCCCTGCTGGCCTTCTGCAATGGGCATATATTTTGTCTACCCAGCATTCCTTTCCTT--TTTGAGAATAACTCTT----CAGGTCAAAGTAGTCACGCCCAGTCCTCCTGGGCAAGAG------------------AAACAG-CCCCTCCTTCCCCTTCTTCCTgggtgaatgtga-tgaggatgaccaattagaatagcc-----------ccaccccctaggcagggtaattggctcagggctg----ggcatgtgacccagacacagccatactgagtcctcct------ggggtcttgccagagttcctgtgaaataaaccccctgt----------------------------------------------ctggga-------------------------cggtaagc-----------acagcactggctcgagatggccaata i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 200223 383 + 75148670 AGCTCCAGGGTCCAGACAGCTGTGCACCCACCA------------------CCTTTACCAAAGCCACGGCCGGGGGCCCCTGCTGGTGTTCTGCAATGGGCATATATTTTGTCTACCCAGCATTCCTTTCCTTTCTTTGATAATAACTCTT----CAGGTCCAAGTAGTCATGCCCAGTCCTCCTGGGCAAGAG------------------AAGAGG-CCCCTCCTTCCTCCTCTTCCT-TGTGAATGTGA-TGAGGACgaccaattagaatagcc-----------ccacccccccggcagggtaattggctccgggctg----ggcatgtgacccagacccagccatacagagtcctcct------ggggtcttgccagagttcctgcgaaataaaCCCACTGT----------------------------------------------CTGGGA-------------------------CAGGAAGC-----------ACGGCGCTGGCTTGAGATGGCCAGTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1011772 360 - 1291538 AGCCCCAGAGTCCAGACAGCTGTGCCCCTCCCA------------------CCTTTAGCAAAGCAAAGGCC-GGGGACTCTGCTGGCCTTATGCAATGGGCATATGTTTTGTCTACCCAGCATTCCTTTCCTTTCTTTGAGAATCAGTCTT----CAGGTCAAAGTAATCATGCCCAGTGCTTCTGGGAAAGAG------------------ACACAG-CCCCTCCTTGCTCCTCTTCCTGGGTGAATGTGA-TGAGGATAATAAATTAGAATATCC-----------CCGCCCCCTAGGCAGAGTAACTGGCTCA-----G----GGCATGTGACTTGGGCCAAGCCGTACATGTCCTCCCT------GGGGTCTCACCAGAGTTCCTGAGAAAGAAACCCAGTGT----------------------------------------------CTGGG------------------------------------------------------GCTTGAGATGGCCAGTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75941040 454 + 122082543 AGCACCAAGATCCAGACAACTGTGTGCATCTTAGGCTGGAAAGACAACTCTACTTTAGCAAAGCAAAGGCCAGAGGCCTCTGCTAGCTCTAGGTGATGGAGACCCATCTTGCCTGCCCAGC------TTCCTT---------------CTT----TAGGTTTAACTAACCATGTC--GACCTCCTGGAGAAAAG------------------AAACTGTTCCCTGCTTcctcctccttgggggtggacatgactgagg--gacctattaagatgtccatcaccctcctccacttcctgg--agagtggctggctcaaggctg----tatatgtgacctaggccaaggtgt----------------------gtcttccctgggttactggaaAGTGTACCTTTTGTGACAGTGAGCTGCGGTACAGACAGCATCTTGGTGTGTAGTGTCCACGTGGGAAGTGAGCAGTGGATAGGTGGCAGTGTGGGAAGCAAACAGTGTTGATGGTGCTGGTGTGGGAAATCCTgcg i mm10.chr11 I 643 C 0 s canFam3.chr9 15770902 389 - 61074082 CTACACAGACTCCAGAAAGCTGTGTGCC-----------------------CATGCACAAAGGCAGAGGCTGGCG---------------------TAGGGACACATTTCATCTGTCCAGCATTCCTGTC-----TTTGTGAATGGGTCTTCCTCCAACCTGAGGAAATAATGCCCAGTCCTTGAAGGGGGTAGGTGGTGGGCACAGACACAACACGG-CCACACCGTCCCCTTCCTCA-GGGTAAAAGTGAATGGGGTCAActaactagaatatcc-----------ccac-ccctgagcaaag--aatggctcaggacgggacaggcatgtggccaaagccttgctacaaagcccccccccaccccagggtgctcaccagagttactgagaaatacactctttcc----------------------------------------------ctatga-------------------------gagtaagc----tgtgaggacaatattggctaaggatggccagtg i canFam3.chr9 C 0 C 0 e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=13988.000000 s hg38.chr17_GL383563v3_alt 326846 9 + 375691 gccacctgg s ponAbe2.chr17 184986 9 + 73212453 GCCACCTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294617 9 - 81552678 gccacctgg i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 200606 9 + 75148670 GCCACCTGG i chlSab2.chr16 C 0 I 44 s calJac3.chrUn_GL286409 1012132 9 - 1291538 GCTATCTGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75941494 9 + 122082543 gccatcttg i mm10.chr11 C 0 C 0 s canFam3.chr9 15771291 9 - 61074082 gccatcttg i canFam3.chr9 C 0 C 0 e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e panTro4.chr17 302944 0 + 82630442 C a score=5131.000000 s hg38.chr17_GL383563v3_alt 326855 7 + 375691 ctccccc s ponAbe2.chr17 184995 7 + 73212453 CTCCCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294626 7 - 81552678 ctccccc i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012141 7 - 1291538 CTGCATC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75941503 7 + 122082543 ctgcctc i mm10.chr11 C 0 C 0 s canFam3.chr9 15771300 7 - 61074082 ctaccac i canFam3.chr9 C 0 I 231 e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e panTro4.chr17 302944 0 + 82630442 C a score=14614.000000 s hg38.chr17_GL383563v3_alt 326862 34 + 375691 t-tgaaacggcctgtctgccggtgcagctaaacag s ponAbe2.chr17 185002 34 + 73212453 T-AGAAACAGCCTGTCTGCAGGTGCAGCTaaacag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294633 34 - 81552678 t-agaaacggcctgtctgcaggtgcagctaaacag i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012148 33 - 1291538 T-AG-AACAGCCTGTCTGCAAGTGCAGCTAAACAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75941510 34 + 122082543 tcagaaactgccaggctgaaaccat-gcttagaga i mm10.chr11 C 0 C 0 e canFam3.chr9 15771307 231 - 61074082 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e panTro4.chr17 302944 0 + 82630442 C a score=128804.000000 s hg38.chr17_GL383563v3_alt 326896 173 + 375691 agctgaga-gatgaaggtgagtcacctcatacccatggtcaatggctggatccagccgtgcctgaacgactgttttgatccccagg-tgccaggcccacagagctgcctttttgcttatgctagtttgaattgg----gtccttgtcatttgccatccagagccctgagtaaGTCACCT s ponAbe2.chr17 185036 170 + 73212453 agctgaga-gatgaaggtgagtcatctcaaacccatggtcaacggctggatccagccatgcctgaaccactgttttgatccccaggttgccaggcccacagagctccctttttgcttatgctactttgaattgg----gtccttgtcatttgccatccagagccc----taaGTCACCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294667 157 - 81552678 agCTGAGA-GTCGAAGATGAGTCATCTCAAACCCATGGT-----------------CGTGCCTGAACCACTGTTTTGATCCCCAGATTGCCAGGTCCACAGAGCTccctttttgcttacactagtttgaattgg----gtccttgtcatttgccatccagagccctgagtaaGTCACCT i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012181 174 - 1291538 AGCTGAGA-GTTGACGGTGTATCATCCCACGCCCATTGTCAATGGctggatccagccatgcctgaaccgctattctgatccccagcttgccaggcccacagagcccccgttttgcttaagctagtttgaattgg----gtgcttgttgtttgccatcaggagccctgagtaaGTCACCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75941544 175 + 122082543 agtcgacg-gaaggaggcgaatacgcctgaagatattgtcagtcactgggtgcagccaagcctgacccacttttatggttcccagtttgccagactcgcagagtcccatttttgcttcaggtagtttgagctggagtcgtatttgtgattgatcat---gaactctgaGAAAATCACCT i mm10.chr11 C 0 I 49 s canFam3.chr9 15771538 175 - 61074082 agctgagctgatagaggtaaataacccagatggcactgtcaatcgctagatctagctatgcctgaaccactactttgattcccaagttgccaggagcacagaatctcctttttgctcaagctagtttaagttcg----gtctttgtcaggtgtaatcaagagtcctgagtaGAGCACTT i canFam3.chr9 I 231 C 0 e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e panTro4.chr17 302944 0 + 82630442 C a score=9004.000000 s hg38.chr17_GL383563v3_alt 327069 16 + 375691 -GCACTGTGTGGGAAGG s ponAbe2.chr17 185206 16 + 73212453 -GCACTGTGTGGGAAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294824 16 - 81552678 -GCACTGTGTGGGAAGG i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012355 16 - 1291538 -GCAGTGTGTAGGAGGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15771713 17 - 61074082 CTCCAGGAATGGGAAGG i canFam3.chr9 C 0 I 8 e mm10.chr11 75941719 49 + 122082543 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e panTro4.chr17 302944 0 + 82630442 C a score=3783.000000 s hg38.chr17_GL383563v3_alt 327085 9 + 375691 TGTGACCGT s ponAbe2.chr17 185222 9 + 73212453 TGTGACCGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294840 9 - 81552678 TGTGACCGT i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012371 9 - 1291538 AGTGACCAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e panTro4.chr17 302944 0 + 82630442 C a score=10991.000000 s hg38.chr17_GL383563v3_alt 327094 16 + 375691 GCACCACACTTACTAA s panTro4.chr17 302944 16 + 82630442 GCACCACACATACTAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185231 16 + 73212453 GCACCACACACACTAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 294849 16 - 81552678 GCACCACACATACGAA i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012380 16 - 1291538 GCAGCACACACAGTAA i calJac3.chrUn_GL286409 C 0 I 1 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=31822.000000 s hg38.chr17_GL383563v3_alt 327110 80 + 375691 CAGTC---------GTCTTCACAGGCGACCGTGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA s panTro4.chr17 302960 80 + 82630442 CAGTC---------GTCTTCACAGGCGACCGTAGACCACACACACTAACA---------GTCATCTTCACAGGCGACCGCACACCACACTTACTAACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185247 98 + 73212453 CGGACGTGCCCGATGTCTTCACAGGGGACCGCGCACCACACACACTAACGGACGTGCCTGACGTCTTCACAGGGGACCAAGCACCACACACACTAACG i ponAbe2.chr17 C 0 I 9 s nomLeu3.chr19 294865 98 - 81552678 CAGACGTGCCCGACGTCTTCACAGGTGACCGTGCACCACACATACGAACAGACGTGCCCGACGTCTTCACAGGTGACCGTGCACCACACATACTAACG i nomLeu3.chr19 C 0 I 9 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=65495.000000 s hg38.chr17_GL383563v3_alt 327190 156 + 375691 GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA s panTro4.chr17 303040 156 + 82630442 GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCACGCACCACAGTTACTAACA---------GTCGTCTTCACAGGCGACTGCGCACCACACACACTAACG---------GACGTCTTCACAGGCGACCGCGTGCCACACACACTAACA i panTro4.chr17 C 0 T 252 s ponAbe2.chr17 185354 183 + 73212453 GACGTCTTCACAGGGGACCAAGCACCACACACACTAACGGACGTGCCCGACGTCTTCACAGGGGACCAAGCACCACACACACTAACGGACGTGCGTGACGTCTTCACAGGGGACCAAGCACCACACACACTAACGGACGTGCCTGACGTCTTCACAGGGGACCAAGCACCACACACACTAACG i ponAbe2.chr17 I 9 I 9 s nomLeu3.chr19 294972 183 - 81552678 GACGTCTTCACAGGTGACCACACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCGTGCACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACG i nomLeu3.chr19 I 9 I 9 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=4283.000000 s hg38.chr17_GL383563v3_alt 327346 21 + 375691 GTCGTCTTCACAGGCGACCGC s ponAbe2.chr17 185546 21 + 73212453 GACGTCTTCACAGGGGACCAA i ponAbe2.chr17 I 9 C 0 s nomLeu3.chr19 295164 21 - 81552678 GACGTCTTCACAGGTGACCGT i nomLeu3.chr19 I 9 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e panTro4.chr17 303196 252 + 82630442 T a score=17691.000000 s hg38.chr17_GL383563v3_alt 327367 39 + 375691 GCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCGC s panTro4.chr17 302944 39 + 82630442 GCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGT i panTro4.chr17 T 252 T 39 s ponAbe2.chr17 185567 48 + 73212453 GCACCACACACACTAACGGACGTGCCCGACGTCTTCACAGGCGACCGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295185 48 - 81552678 GCACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCAC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=40269.000000 s hg38.chr17_GL383563v3_alt 327406 98 + 375691 GCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA---------GT s panTro4.chr17 302944 98 + 82630442 GCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGTAGACCACACACACTAACA---------GTCATCTTCACAGGCGACCGCACACCACACTTACTAACA---------GT i panTro4.chr17 T 39 C 0 s ponAbe2.chr17 185615 125 + 73212453 GCACCACACACACTAACGGACGTGCCTGACGTCTTCACAGGCGACCGCGCACCACACACACTAACGGACGTGCCCGACGTCTTCACAGGGGACCGCGCACCACACACACTAACGGACGTGCCCGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295233 125 - 81552678 ACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCGCACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACTGCACACCACACATACTAACGGACGTGCCCGA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200615 44 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=16988.000000 s hg38.chr17_GL383563v3_alt 327504 21 + 375691 CGTCTTCACAGGCGACCGCGC s panTro4.chr17 303042 21 + 82630442 CGTCTTCACAGGCGACCGCGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185740 21 + 73212453 CGTCTTCACAGGGGACCGCGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295358 21 - 81552678 CGTCTTCACGGGCGACCGTGC i nomLeu3.chr19 C 0 T 306 s chlSab2.chr16 200659 21 + 75148670 CGTCCTCACAGGAGACCGCAC i chlSab2.chr16 I 44 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C a score=8269.000000 s hg38.chr17_GL383563v3_alt 327525 16 + 375691 ACCACACACACTAACA s panTro4.chr17 303063 16 + 82630442 ACCACACACACTAACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185761 16 + 73212453 ACCACACACGCTAACG i ponAbe2.chr17 C 0 I 11 s chlSab2.chr16 200680 16 + 75148670 ACCACACACGCTAACA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 306 - 81552678 T a score=300.000000 s hg38.chr17_GL383563v3_alt 327541 1 + 375691 G s panTro4.chr17 303079 1 + 82630442 G i panTro4.chr17 C 0 C 0 s chlSab2.chr16 200696 1 + 75148670 G i chlSab2.chr16 C 0 I 54 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 306 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=9847.000000 s hg38.chr17_GL383563v3_alt 327542 117 + 375691 TCGTCTTCACAGGCGACCGCGCACCACACACACTAACAGTCGTCTTCACAGGCGACCGCGCACCACACACACTAACAGTCGTCTTCACAGGCGACCGCGCACCACACACACTAACAG s panTro4.chr17 303080 117 + 82630442 TCGTCTTCACAGGCGACCACGCACCACAGTTACTAACAGTCGTCTTCACAGGCGACTGCGCACCACACACACTAACGGACGTCTTCACAGGCGACCGCGTGCCACACACACTAACAG i panTro4.chr17 C 0 T 39 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 306 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=2850.000000 s hg38.chr17_GL383563v3_alt 327659 39 + 375691 TCGTCTTCACAGGCGACCGCGCACCACACTGACTAACAG s panTro4.chr17 303158 39 + 82630442 ACGTCTTCACAGGCGACCGCGTGCCACACACACTAACAG i panTro4.chr17 T 39 T 78 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 306 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=5914.000000 s hg38.chr17_GL383563v3_alt 327698 78 + 375691 TCGTCTTCACAGGCGACCGCGCACCACACTGACTAACAGTCGTCTTCACAGGCGACCGCGCACCACACTGACTAACAG s panTro4.chr17 303119 78 + 82630442 TCGTCTTCACAGGCGACTGCGCACCACACACACTAACGGACGTCTTCACAGGCGACCGCGTGCCACACACACTAACAG i panTro4.chr17 T 78 T 78 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 306 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=3232.000000 s hg38.chr17_GL383563v3_alt 327776 43 + 375691 TCGTCTTCACAGGCGACCGCGCACCACACTGACTAACAGTCGT s panTro4.chr17 303119 43 + 82630442 TCGTCTTCACAGGCGACTGCGCACCACACACACTAACGGACGT i panTro4.chr17 T 78 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 306 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=7850.000000 s hg38.chr17_GL383563v3_alt 327819 35 + 375691 CTTCACAGGCGACCGCGCACCACACTGACTAACAG s panTro4.chr17 303162 35 + 82630442 CTTCACAGGCGACCGCGTGCCACACACACTAACAG i panTro4.chr17 C 0 T 253 s nomLeu3.chr19 295073 35 - 81552678 CTTCACAGGTGACCGTGCACCACACATACTAACGG i nomLeu3.chr19 T 306 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=521.000000 s hg38.chr17_GL383563v3_alt 327854 55 + 375691 TCGTCTTCACAGGCGACCGCGCACCACACTGACAGTCGTCTTCACAGGCGACCGC s nomLeu3.chr19 295108 29 - 81552678 ACGT--------------------------GCCCGACGTCTTCACAGGTGACCAC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 303197 253 + 82630442 T a score=4804.000000 s hg38.chr17_GL383563v3_alt 327909 23 + 375691 GCACCACACTGACTAACAGTCGT s panTro4.chr17 302944 23 + 82630442 GCACCACACATACTAACAGTCGT i panTro4.chr17 T 253 C 0 s nomLeu3.chr19 295137 23 - 81552678 ACACCACACATACTAACGGACGT i nomLeu3.chr19 C 0 T 183 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=2699.000000 s hg38.chr17_GL383563v3_alt 327932 39 + 375691 CTTCACAGGCGACCGCGCACCACACTGACTAACAGTCGT s panTro4.chr17 302967 39 + 82630442 CTTCACAGGCGACCGTAGACCACACACACTAACAGTCAT i panTro4.chr17 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295160 183 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=4141.000000 s hg38.chr17_GL383563v3_alt 327971 16 + 375691 CTTCACAGGCGACCGC s panTro4.chr17 303006 16 + 82630442 CTTCACAGGCGACCGC i panTro4.chr17 C 0 T 78 s nomLeu3.chr19 294977 16 - 81552678 CTTCACAGGTGACCAC i nomLeu3.chr19 T 183 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=3931.000000 s hg38.chr17_GL383563v3_alt 327987 20 + 375691 GCACCACACTGACTAACAGT s panTro4.chr17 302944 20 + 82630442 GCACCACACATACTAACAGT i panTro4.chr17 T 78 C 0 s nomLeu3.chr19 294993 20 - 81552678 ACACCACACATACTAACGGA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200697 54 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=1746.000000 s hg38.chr17_GL383563v3_alt 328007 3 + 375691 CGT s panTro4.chr17 302964 3 + 82630442 CGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 295013 3 - 81552678 CGT i nomLeu3.chr19 C 0 T 44 s chlSab2.chr16 200751 3 + 75148670 CGT i chlSab2.chr16 I 54 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=300.000000 s hg38.chr17_GL383563v3_alt 328010 1 + 375691 C s panTro4.chr17 302967 1 + 82630442 C i panTro4.chr17 C 0 C 0 s chlSab2.chr16 200754 1 + 75148670 C i chlSab2.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 219987 664 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295016 44 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=6740.000000 s hg38.chr17_GL383563v3_alt 328011 15 + 375691 TTCACAGGCGACCGC s panTro4.chr17 302968 15 + 82630442 TTCACAGGCGACCGT i panTro4.chr17 C 0 T 39 s rheMac3.chr16 220651 15 + 80904711 TTCACAGGAGACCGC i rheMac3.chr16 I 664 C 0 s chlSab2.chr16 200755 15 + 75148670 CTCACGGGAGACCGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295016 44 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=9334.000000 s hg38.chr17_GL383563v3_alt 328026 18 + 375691 GCACCACACATACTAACA s panTro4.chr17 302944 18 + 82630442 GCACCACACATACTAACA i panTro4.chr17 T 39 C 0 s rheMac3.chr16 220666 18 + 80904711 CCACCACACATACTAACA i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 200770 18 + 75148670 ACACCACACATACTAACA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295016 44 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=1000.000000 s hg38.chr17_GL383563v3_alt 328044 1 + 375691 G s panTro4.chr17 302962 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 294972 1 - 81552678 G i nomLeu3.chr19 T 44 C 0 s rheMac3.chr16 220684 1 + 80904711 G i rheMac3.chr16 C 0 I 154 s chlSab2.chr16 200788 1 + 75148670 G i chlSab2.chr16 C 0 I 55 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=-155.000000 s hg38.chr17_GL383563v3_alt 328045 1 + 375691 T s panTro4.chr17 302963 1 + 82630442 T i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 294973 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200789 55 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 220685 154 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=2526.000000 s hg38.chr17_GL383563v3_alt 328046 5 + 375691 CGTCT s panTro4.chr17 302964 5 + 82630442 CGTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 294974 5 - 81552678 CGTCT i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 200844 5 + 75148670 CGTCC i chlSab2.chr16 I 55 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 220685 154 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=11019.000000 s hg38.chr17_GL383563v3_alt 328051 14 + 375691 TCACAGGCGACCGC s panTro4.chr17 302969 14 + 82630442 TCACAGGCGACCGT i panTro4.chr17 C 0 T 39 s nomLeu3.chr19 294979 14 - 81552678 TCACAGGTGACCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 220839 14 + 80904711 TCACAGGAGACCGC i rheMac3.chr16 I 154 C 0 s chlSab2.chr16 200849 14 + 75148670 TCACAGGAGACCGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=13143.000000 s hg38.chr17_GL383563v3_alt 328065 19 + 375691 GCACCACACATACTAACA---------G s panTro4.chr17 302944 19 + 82630442 GCACCACACATACTAACA---------G i panTro4.chr17 T 39 C 0 s nomLeu3.chr19 294993 28 - 81552678 ACACCACACATACTAACGGACGTGCCCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 220853 19 + 80904711 ACGCCACACATACTAACA---------G i rheMac3.chr16 C 0 I 434 s chlSab2.chr16 200863 19 + 75148670 ACACCACACATGCTAACA---------G i chlSab2.chr16 C 0 I 10 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=-155.000000 s hg38.chr17_GL383563v3_alt 328084 1 + 375691 T s panTro4.chr17 302963 1 + 82630442 T i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 295021 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200882 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 220872 434 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=2346.000000 s hg38.chr17_GL383563v3_alt 328085 4 + 375691 CGTC s panTro4.chr17 302964 4 + 82630442 CGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 295022 4 - 81552678 CGTC i nomLeu3.chr19 C 0 C 0 s chlSab2.chr16 200892 4 + 75148670 CGTC i chlSab2.chr16 I 10 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 220872 434 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=11441.000000 s hg38.chr17_GL383563v3_alt 328089 15 + 375691 TTCACAGGCGACCGC s panTro4.chr17 302968 15 + 82630442 TTCACAGGCGACCGT i panTro4.chr17 C 0 T 39 s nomLeu3.chr19 295026 15 - 81552678 TTCACAGGTGACCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221306 15 + 80904711 TTCACAGGAGACCGC i rheMac3.chr16 I 434 C 0 s chlSab2.chr16 200896 15 + 75148670 CTCACAGGAGACCGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=12811.000000 s hg38.chr17_GL383563v3_alt 328104 19 + 375691 GCACCACACATACTAACA---------G s panTro4.chr17 302944 19 + 82630442 GCACCACACATACTAACA---------G i panTro4.chr17 T 39 C 0 s nomLeu3.chr19 295041 28 - 81552678 ACACCACACATACTAACGGACGTGCCCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221321 19 + 80904711 ACCCCACACATACTAACA---------G i rheMac3.chr16 C 0 I 148 s chlSab2.chr16 200911 19 + 75148670 ACACCACACATGCTAACA---------G i chlSab2.chr16 C 0 I 10 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e papAnu2.chr16 212171 82 + 74645514 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=46721.000000 s hg38.chr17_GL383563v3_alt 328123 226 + 375691 TCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACAT s panTro4.chr17 302963 226 + 82630442 TCGTCTTCACAGGCGACCGTAGACCACACACACTAACA---------GTCATCTTCACAGGCGACCGCACACCACACTTACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCACGCACCACAGTTACTAACA---------GTCGTCTTCACAGGCGACTGCGCACCACACACACTAACG---------GACGTCTTCACAGGCGACCGCGTGCCACACAC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 295069 271 - 81552678 ACGTCTTCACAGGTGACCGTGCACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCGTGCACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCGCACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACTGCACACCACACAT i nomLeu3.chr19 C 0 T 96 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=681.000000 s hg38.chr17_GL383563v3_alt 328349 8 + 375691 ACTAACAG--------- s panTro4.chr17 303189 8 + 82630442 ACTAACAG--------- i panTro4.chr17 C 0 T 39 s nomLeu3.chr19 295244 17 - 81552678 ACTAACGGACGTGCCCG i nomLeu3.chr19 T 96 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=6972.000000 s hg38.chr17_GL383563v3_alt 328357 29 + 375691 TCGTCTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303158 29 + 82630442 ACGTCTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 T 39 T 156 s nomLeu3.chr19 295261 29 - 81552678 ACGTCTTCACAGGTGACCGCACACCACAC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=-556.000000 s hg38.chr17_GL383563v3_alt 328386 2 + 375691 -TT s panTro4.chr17 303031 2 + 82630442 -TT i panTro4.chr17 T 156 I 117 s nomLeu3.chr19 295290 2 - 81552678 AT- i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=7156.000000 s hg38.chr17_GL383563v3_alt 328388 37 + 375691 GCTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303150 37 + 82630442 ACTAACG---------GACGTCTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 I 117 T 78 s nomLeu3.chr19 295292 46 - 81552678 ACTAACGGACGTGCCCGACGTCTTCACAGGTGACTGCACACCACAC i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=5770.000000 s hg38.chr17_GL383563v3_alt 328425 32 + 375691 TTGCTAACA---------GTCGTCTTCACAGGCGACCGCGC s panTro4.chr17 303109 32 + 82630442 TTACTAACA---------GTCGTCTTCACAGGCGACTGCGC i panTro4.chr17 T 78 C 0 s nomLeu3.chr19 295338 41 - 81552678 ATACTAACGGACGTGCCCGACGTCTTCACGGGCGACCGTGC i nomLeu3.chr19 C 0 T 402 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=3373.000000 s hg38.chr17_GL383563v3_alt 328457 46 + 375691 ACCACACTTGCTAACAGTCGTCTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303141 46 + 82630442 ACCACACACACTAACGGACGTCTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 C 0 T 78 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 402 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=4019.000000 s hg38.chr17_GL383563v3_alt 328503 53 + 375691 TTGCTAACAGTCGTCTTCACAGGCGACCGCGCACCACACTTGCTAACAGTCGT s panTro4.chr17 303109 53 + 82630442 TTACTAACAGTCGTCTTCACAGGCGACTGCGCACCACACACACTAACGGACGT i panTro4.chr17 T 78 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295379 402 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=5992.000000 s hg38.chr17_GL383563v3_alt 328556 25 + 375691 CTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303162 25 + 82630442 CTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 C 0 T 39 s nomLeu3.chr19 294977 25 - 81552678 CTTCACAGGTGACCACACACCACAC i nomLeu3.chr19 T 402 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=9353.000000 s hg38.chr17_GL383563v3_alt 328581 49 + 375691 TTGCTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACAG s panTro4.chr17 303148 49 + 82630442 ACACTAACG---------GACGTCTTCACAGGCGACCGCGTGCCACACACACTAACAG i panTro4.chr17 T 39 T 97 s nomLeu3.chr19 295002 58 - 81552678 ATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACGG i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=331.000000 s hg38.chr17_GL383563v3_alt 328630 55 + 375691 TCGTCTTCACGGGCGACCTTGCACCACACTAACAGTCGCCTTCACAAGCGACCGT s nomLeu3.chr19 295060 29 - 81552678 ACGTGCCC--------------------------GACGTCTTCACAGGTGACCGT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 303197 97 + 82630442 T a score=5026.000000 s hg38.chr17_GL383563v3_alt 328685 23 + 375691 GCACCACACTTACTAACAGTCGT s panTro4.chr17 303100 23 + 82630442 GCACCACAGTTACTAACAGTCGT i panTro4.chr17 T 97 C 0 s nomLeu3.chr19 295089 23 - 81552678 GCACCACACATACTAACGGACGT i nomLeu3.chr19 C 0 T 183 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=1393.000000 s hg38.chr17_GL383563v3_alt 328708 17 + 375691 CTTCACAGGCGACCGTG s panTro4.chr17 303123 17 + 82630442 CTTCACAGGCGACTGCG i panTro4.chr17 C 0 T 192 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295112 183 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=1587.000000 s hg38.chr17_GL383563v3_alt 328725 19 + 375691 CACACTTACTAACAGTCGT s panTro4.chr17 302948 19 + 82630442 CACACATACTAACAGTCGT i panTro4.chr17 T 192 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e nomLeu3.chr19 295112 183 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=4132.000000 s hg38.chr17_GL383563v3_alt 328744 16 + 375691 CTTCACAGGCGACCGC s panTro4.chr17 302967 16 + 82630442 CTTCACAGGCGACCGT i panTro4.chr17 C 0 I 50 s nomLeu3.chr19 294929 16 - 81552678 CTTCACAGGTGACCGT i nomLeu3.chr19 T 183 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=636.000000 s hg38.chr17_GL383563v3_alt 328760 11 + 375691 GCACCACACTG s nomLeu3.chr19 294945 11 - 81552678 GCACCACACAT i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 302983 50 + 82630442 I a score=1721.000000 s hg38.chr17_GL383563v3_alt 328771 7 + 375691 ACTAACA s panTro4.chr17 303033 7 + 82630442 ACTAACA i panTro4.chr17 I 50 C 0 s nomLeu3.chr19 294956 7 - 81552678 ACTAACG i nomLeu3.chr19 C 0 I 153 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=5159.000000 s hg38.chr17_GL383563v3_alt 328778 21 + 375691 GTCGTCTTCACAGGCGACCGC s panTro4.chr17 303040 21 + 82630442 GTCGTCTTCACAGGCGACCGC i panTro4.chr17 C 0 T 117 s nomLeu3.chr19 295116 21 - 81552678 GACGTCTTCACAGGTGACCAC i nomLeu3.chr19 I 153 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=21778.000000 s hg38.chr17_GL383563v3_alt 328799 108 + 375691 GCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACA s panTro4.chr17 302944 108 + 82630442 GCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGTAGACCACACACACTAACA---------GTCATCTTCACAGGCGACCGCACACCACACTTACTAACA---------GTCGTCTTCACA i panTro4.chr17 T 117 C 0 s nomLeu3.chr19 295137 135 - 81552678 ACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCGTGCACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACGGACGTGCCCGACGTCTTCACA i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229024 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I a score=34839.000000 s hg38.chr17_GL383563v3_alt 328907 89 + 375691 GGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGC s panTro4.chr17 303052 89 + 82630442 GGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCACGCACCACAGTTACTAACA---------GTCGTCTTCACAGGCGACTGCGC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 295272 107 - 81552678 GGTGACCGCACACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACTGCACACCACACATACTAACGGACGTGCCCGACGTCTTCACGGGCGACCGTGC i nomLeu3.chr19 C 0 T 240 s macFas5.chr16 229024 105 + 80997621 GGCGACCACACCCCACACATGCTAGCA--GGTGCCCGACGTCCTCACAGGAGACCGCACACCACACATACTAACAGGTGCGCCCGACGTCCTCACAGGAGACCGCAC i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I a score=19655.000000 s hg38.chr17_GL383563v3_alt 328996 46 + 375691 ACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303141 46 + 82630442 ACCACACACACTAACG---------GACGTCTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 C 0 T 78 s nomLeu3.chr19 295139 55 - 81552678 ACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCGTGCACCACAC i nomLeu3.chr19 T 240 C 0 s macFas5.chr16 229129 53 + 80997621 ACCACACATACTAACA--GGTGCCCGACGTCCTCACAGGAGACCGCACACCACAC i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I a score=18323.000000 s hg38.chr17_GL383563v3_alt 329042 48 + 375691 TTGCTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACTTGCTAACA s panTro4.chr17 303109 48 + 82630442 TTACTAACA---------GTCGTCTTCACAGGCGACTGCGCACCACACACACTAACG i panTro4.chr17 T 78 C 0 s nomLeu3.chr19 295194 57 - 81552678 ATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACG i nomLeu3.chr19 C 0 T 226 s macFas5.chr16 229182 57 + 80997621 ATACTAACAGGTGCGCCCGACGTCCTCACAGGAGACCGCACACCACACATGCTAACA i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I a score=6442.000000 s hg38.chr17_GL383563v3_alt 329090 30 + 375691 -------GTCGTCTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303157 30 + 82630442 -------GACGTCTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 C 0 T 78 s macFas5.chr16 229239 37 + 80997621 GGTGCCCGACGTCCTCACAGGAGACCGCACACCACAC i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295251 226 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=14505.000000 s hg38.chr17_GL383563v3_alt 329120 78 + 375691 TTGCTAACAGT---------CGTCTTCACAGGCGACCGCGCACCACACTTGCTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303109 78 + 82630442 TTACTAACAGT---------CGTCTTCACAGGCGACTGCGCACCACACACACTAACG---------GACGTCTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 T 78 T 39 s macFas5.chr16 229276 96 + 80997621 ATGCTAACAGGTGCGCCCGACGTCCTCACAGGAGACCGCACACCACACATACTAACAGGTGCGCCCGACGTCCTCACAGGAGACCGCACACCACAC i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295251 226 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=530.000000 s hg38.chr17_GL383563v3_alt 329198 14 + 375691 TTGCTAACAGTCGT------- s panTro4.chr17 303148 14 + 82630442 ACACTAACGGACGT------- i panTro4.chr17 T 39 C 0 s macFas5.chr16 229372 21 + 80997621 ATACTAACAGGTGCCCGACGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295251 226 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=11100.000000 s hg38.chr17_GL383563v3_alt 329212 25 + 375691 CTTCACAGGCGACCGCGCACCACAC s panTro4.chr17 303162 25 + 82630442 CTTCACAGGCGACCGCGTGCCACAC i panTro4.chr17 C 0 T 39 s nomLeu3.chr19 295025 25 - 81552678 CTTCACAGGTGACCACACACCACAC i nomLeu3.chr19 T 226 C 0 s macFas5.chr16 229393 25 + 80997621 CCTCACAGGAGACCGCACCCCACAC i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I a score=19401.000000 s hg38.chr17_GL383563v3_alt 329237 49 + 375691 TTGCTAACA---------GTCGTCTTCACAGGCGACCGCGCACCACACATACTAACAG s panTro4.chr17 303148 49 + 82630442 ACACTAACG---------GACGTCTTCACAGGCGACCGCGTGCCACACACACTAACAG i panTro4.chr17 T 39 T 253 s nomLeu3.chr19 295050 58 - 81552678 ATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCGTGCACCACACATACTAACGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 229418 58 + 80997621 ATGCTAACAGGTGCGCCCGACGTCCTCACAGGAGACCGCACACCACACATGCTAACAG i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I a score=81.000000 s hg38.chr17_GL383563v3_alt 329286 8 + 375691 TCGTCTTC s nomLeu3.chr19 295108 8 - 81552678 ACGTGCCC i nomLeu3.chr19 C 0 I 192 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229476 0 + 80997621 C e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 303197 253 + 82630442 T a score=-568.000000 s hg38.chr17_GL383563v3_alt 329294 26 + 375691 ACGGGCGACCTTGCACCACACTAACA s macFas5.chr16 229476 8 + 80997621 --GTGCGCCC---------------- i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295116 192 - 81552678 I e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 303197 253 + 82630442 T a score=7784.000000 s hg38.chr17_GL383563v3_alt 329320 39 + 375691 GTCGCCTTCACAAGCGACCGTGCACCACACTTACTAACA s nomLeu3.chr19 295308 39 - 81552678 GACGTCTTCACAGGTGACTGCACACCACACATACTAACG i nomLeu3.chr19 I 192 T 418 s macFas5.chr16 229484 39 + 80997621 GACGTCCTCACAGGAGACCGCACACCACACATGCTAACA i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 303197 253 + 82630442 T a score=615.000000 s hg38.chr17_GL383563v3_alt 329359 41 + 375691 G---------TCGTCTTCACAGGCGACCGTGCAC---ACTTACTAACAG---------TCAT s macFas5.chr16 229523 62 + 80997621 GGTGCGCCCGACGTCCTCACAGGAGACCGCACACCACACATGCTAACAGGTGCGCCCGACGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295347 418 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 303197 253 + 82630442 T a score=3591.000000 s hg38.chr17_GL383563v3_alt 329400 16 + 375691 CTTCACAGGCGACCGC s nomLeu3.chr19 294929 16 - 81552678 CTTCACAGGTGACCGT i nomLeu3.chr19 T 418 C 0 s macFas5.chr16 229585 16 + 80997621 CCTCACAGGAGACCGC i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I e panTro4.chr17 303197 253 + 82630442 T a score=22085.000000 s hg38.chr17_GL383563v3_alt 329416 62 + 375691 GCACCACAGATACTAACA---------GTCGTCTTCACAGGCGACCATAGACCACACATACTAACAGTCGT------- s panTro4.chr17 302944 62 + 82630442 GCACCACACATACTAACA---------GTCGTCTTCACAGGCGACCGTAGACCACACACACTAACAGTCAT------- i panTro4.chr17 T 253 C 0 s nomLeu3.chr19 294945 71 - 81552678 GCACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACACATACTAACGGACGT------- i nomLeu3.chr19 C 0 T 87 s macFas5.chr16 229601 76 + 80997621 ACACCACACATGCTAACA--GGTGCCCGACGTCCTCACAGGAGACCGCACACCACACATGCTAACAGGTGCCCGACGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I a score=6902.000000 s hg38.chr17_GL383563v3_alt 329478 39 + 375691 CTTCACAGGCGACCGCGCACCACAGATACTAACAGTCAT--------- s panTro4.chr17 303006 39 + 82630442 CTTCACAGGCGACCGCACACCACACTTACTAACAGTCGT--------- i panTro4.chr17 C 0 C 0 s macFas5.chr16 229677 48 + 80997621 CCTCACAGGAGACCGCACACCACACATACTAACAGGTGCGCCCGACGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295016 87 - 81552678 T e ponAbe2.chr17 185777 11 + 73212453 I a score=26429.000000 s hg38.chr17_GL383563v3_alt 329517 65 + 375691 CTTCACAGGCGACCGTAGACCACACATACTAACA---------GTCGTCTTCACAGGCGACCACGCACCACA--CA s panTro4.chr17 303045 67 + 82630442 CTTCACAGGCGACCGCGCACCACACACACTAACA---------GTCGTCTTCACAGGCGACCACGCACCACAGTTA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 294929 74 - 81552678 CTTCACAGGTGACCGTGCACCACACATACTAACGGACGTGCCCGACGTCTTCACAGGTGACCACACACCACA--CA i nomLeu3.chr19 T 87 I 70 s macFas5.chr16 229725 72 + 80997621 CCTCACAGGAGACCGCACACCACACATACTAACA--GGTGCCCGACGTCCTCACAGGAGACCGCACACCACA--CA i macFas5.chr16 C 0 I 2 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e ponAbe2.chr17 185777 11 + 73212453 I a score=515.000000 s hg38.chr17_GL383563v3_alt 329582 8 + 375691 CTAACAGT--------- s panTro4.chr17 303112 8 + 82630442 CTAACAGT--------- i panTro4.chr17 C 0 C 0 s macFas5.chr16 229799 17 + 80997621 CTAACAGGTGCGCCCGA i macFas5.chr16 I 2 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295003 70 - 81552678 I e ponAbe2.chr17 185777 11 + 73212453 I a score=1746.000000 s hg38.chr17_GL383563v3_alt 329590 3 + 375691 CGT s panTro4.chr17 303120 3 + 82630442 CGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185788 3 + 73212453 CGT i ponAbe2.chr17 I 11 C 0 s macFas5.chr16 229816 3 + 80997621 CGT i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e nomLeu3.chr19 295003 70 - 81552678 I a score=15692.000000 s hg38.chr17_GL383563v3_alt 329593 20 + 375691 CTTCACAGGCGACCGCGCAC s panTro4.chr17 303123 20 + 82630442 CTTCACAGGCGACTGCGCAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185791 20 + 73212453 CTTCACAGGGGACCGCGCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295073 20 - 81552678 CTTCACAGGTGACCGTGCAC i nomLeu3.chr19 I 70 C 0 s macFas5.chr16 229819 20 + 80997621 CCTCACAGGAGACCGCACAC i macFas5.chr16 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e canFam3.chr9 15771730 8 - 61074082 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I a score=8234.000000 s hg38.chr17_GL383563v3_alt 329613 7 + 375691 CACACAC s panTro4.chr17 303143 7 + 82630442 CACACAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185811 7 + 73212453 CACACAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295093 7 - 81552678 CACACAT i nomLeu3.chr19 C 0 I 240 s macFas5.chr16 229839 7 + 80997621 CACACAT i macFas5.chr16 C 0 C 0 s canFam3.chr9 15771738 7 - 61074082 CACATAT i canFam3.chr9 I 8 C 0 e mm10.chr11 75941719 49 + 122082543 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I a score=6960.000000 s hg38.chr17_GL383563v3_alt 329620 5 + 375691 ACTAA s panTro4.chr17 303150 5 + 82630442 ACTAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185818 5 + 73212453 ACTAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295340 5 - 81552678 ACTAA i nomLeu3.chr19 I 240 C 0 s macFas5.chr16 229846 5 + 80997621 ACTAA i macFas5.chr16 C 0 C 0 s canFam3.chr9 15771745 5 - 61074082 ACTAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e calJac3.chrUn_GL286409 1012396 1 - 1291538 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I a score=1735.000000 s hg38.chr17_GL383563v3_alt 329625 2 + 375691 --CG s panTro4.chr17 303155 2 + 82630442 --CG i panTro4.chr17 C 0 I 39 s ponAbe2.chr17 185823 2 + 73212453 --CG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295345 2 - 81552678 --CG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 229851 2 + 80997621 --CA i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1012397 2 - 1291538 --CA i calJac3.chrUn_GL286409 I 1 C 0 s canFam3.chr9 15771750 4 - 61074082 CCTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I a score=23002.000000 s hg38.chr17_GL383563v3_alt 329627 23 + 375691 GACGTGCCCGACATCTTCACAGG s panTro4.chr17 303196 23 + 82630442 GACGTGCCTGACATCTTCATAGG i panTro4.chr17 I 39 C 0 s ponAbe2.chr17 185825 23 + 73212453 GACGTGCCCGACGTCTTCACAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295347 23 - 81552678 GACGTGCCCGACGTCTTCACGGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 229853 23 + 80997621 GGTGCGCCCGACGTCCTCACAGG i macFas5.chr16 C 0 I 82 s calJac3.chrUn_GL286409 1012399 22 - 1291538 GATGTGCC-GATGTCTTCCCAGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15771754 23 - 61074082 AATTAACTTGACATATTAACTAA i canFam3.chr9 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I a score=139.000000 s hg38.chr17_GL383563v3_alt 329650 9 + 375691 CACAGCATG s panTro4.chr17 303219 9 + 82630442 CACAGCATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185848 9 + 73212453 CACAGCATG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295370 1 - 81552678 C-------- i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012421 9 - 1291538 CACAGCAGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15771777 4 - 61074082 ---AATA-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75941719 49 + 122082543 I e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229876 82 + 80997621 I a score=323388.000000 s hg38.chr17_GL383563v3_alt 329659 453 + 375691 AGCCCTGATGTGCGCTTTCTGCTCCTGCTCCTGCTC----CTGCCCCTTCGGAGGCCTGTGCCAGTGGCAGCTGGGCCCGGAGACACCA-GGCCGGCACTGCTCTCTTTCGAGGCACCCGTGTTTGTGCCGACGCTGACTCCCGGTTGTCTGCAGCAGCCACGTGGCCGAAATGGAGCCTCTCCACGG-GGGCTCCTTCCCCAG-CCCCTGGATGGCACAGCAGCCTCTCCTGTCTGTCACCACGTGTGACCTGCTCCCTTAGTCTTCAGCCGCTCATCCACGTCTGCAGGGGCATCTAA---CTCTGTCCCAGGGT-ATCCCAG-ACCCTGGCTCACGCCCCAGGCTCTCCATTCAGGCTCCAT----CGTCCACCTCAGACCATCTCGGGTTTGCTGGTCTTCTGG--ACTAGCGCAGCCAGAAAGAACCCAGGAAGGAAGCCTCACGT-CTGACACAAGAACCTTCGGT s panTro4.chr17 303228 447 + 82630442 AGCCCAGATGTGAGCTTTCTGCTCCTGCTCCTGC----------CCCTTCGTAGGCCTGTGCCAGTGGCAGCTGGGCCCGGAGACACCA-GGCCGGCACTGCTCTCCTTCGAGGCACCCGTGTTTGTGCCGACGCTGACTCCGGGTCGTCTGCAGCAGCCACGTGGCCCAAAGGGAGCCTCTCCACGG-GGGCTCCTTCCACGG-CCCCTGGATGGCACAGCAGCCTCTCCTGTCTGTCACCACGTGTGACCTGCTCCCTTAGTCTTCAGCCGCTCATCCACGTCTGCAGGGGCATCTAA---CTCTGTCCCAGGGT-ATCCCAG-ACCCTGGCTCACGCCCCAGGCTCTCCATTCAGGCTCCAT----CGTCCACCTCGGACCATCTCGGGTTTGCTGGTCTTCTGG--ACTAGCACAGCCAGAAAGAACCCAGGAAGGAAGCCTCACGT-CTGACACGAGAACCTTCGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 185857 446 + 73212453 AGCCCTGATGTAAGCTTTCTGCTCCTGTTCCTGC----------CCCTTTGGAGGCCTGTGCCAGTGGCAGCTGGCCCCAGAGACACCA-GGCCGGCGCTGCTCTCCTTCGAGCCACCAGTGTTTGTGCTGATGCTGACTCTGGCTCCTCTGCAGCAGCCACGTGGCCCAAAGGCAGCCTCTCCACAG-GGGCTCCTTCCACAG-CCCCTGGACGGCACAGCAGCCTCTCCTGTCTGTCACCACGTGTGACCTG-TCCCTTAGTCTTCAGCCGCTCATCCATGTCTGCAGGGGCATCTAA---CTCTGTCCCAGGGT-ATCCCAG-ACCCTGGCTCATGCCCCAGGCTCTCCATTCAGGCTCCAT----CGTCCACCTTGGACCATCTTGGGTTTGCTGGTCTTCTGG--ACTAGCACAGCCAGAAAGAACCCAGGAAGGAAGCCTCACGT-CTGACACGAGAACCTTCGGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295371 313 - 81552678 --------------------------GACCGTGC-------------------------------------------------------------------CTCTCCTTTGAGGCACCAGTGTTCGTGCCGACGCCGA------------------------------------------------------CTCCTTCCACGG-CCCCTGGATGGCACAGCAGCCTCTCCTGTCTGTCACCATGTGTGACCTGCTCCCTTAGTCTTCACCCACTCATCCACGTCTGCAGGGGCATCTAA---CTCTGGCCCAGCGT-ATCCCAGAACCCTGGCTCACACCCCAGGCTCTCCATTCAGGTTCCAT----CATGCACCTCGGACCATCTCGGGTTTGCTGGTCTTCTGG--ACTAGCGCGGACAGAAAGAACACAGGAAGGAAGCCTCACGT-CTGACACGAGAACCTTCGGT i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1012430 443 - 1291538 AG-CCGGGCGTGAGCTTTCTGCCACCACTCCTGCTCCTGACTGCCCCTTGGGAGGCCTGTGCCAGCAGCAGTTGGGCCCAGAGACCCTA-GGCCAGCACTGCTCTCCCTCCAGGCAC-------------AGCGCTGACCCTGGCTCCTCTGCAGCAGCCACATGGCCCAAAGG-AGCCTCTCCATTG-GGGCTCCCTCCACGG-CCCCTGTATGGCAGGGCAGCCTCTC----CTGTCACCATGTGTGACCTGCTCCCTCGGTCTTCA-CCACTCATTCATGTCTGCCGGGACCTCTAA---CTCTGTCCCAGGGT-ATCCCAA-ACCCTGACTCATATCCCAGGCTCTCCATTCAGGCTCCATTAACCAACTACCTCTGAACACCTCAGGTCTGCTGGTCTTTGGGGTACCAATGCAACCAGAAAGAACACAGGAAGGAAGCCTCACGT-CTGACACGAGAACCTTGGGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75941768 365 + 122082543 AGCTTTGGGGAGAGCTGTCTGCTCCTGCAGCTAA------CTGTCCTCT--GAGGCCT----------------GACTCCGAGATGCCATGGCAGAGATCACCTTCCTTTCAACCTCCAGTGTTCATTCTTTGGCTAACTTT-GCGCTTCTGCTGTAGCTATGGGGCCCAAAGAGAG---------------------CTCCAG-CTCCTGGATA-----------------------------ATATGACCTGCTCTCTTCAAATTA-------CACCTATGTCTCCAATGATCCCCAA----GAGATCCCAGGCTCATCCCAC-ACCCTGGCCTATCTCCAAGGTTGTACGTGGAGACTCTGT----CATCCACTTCTGACCACCC--------CTCATCTTCCAG--AA-AGTGCGCCTAGAATGATCATGACAAAGAAGCAGGGTTG-CTGAC---AGGATTCTGAGT i mm10.chr11 I 49 C 0 s canFam3.chr9 15771781 431 - 61074082 -CCCTAGAAGGGAACTTCTTGCTCCAGAGCTTGC------TGGCCCCTGTGGAGGTCTGTACCAGGAGCAATCTGGCCCAGAGATGCCAGGGCAATGGCTGCTTCCCTTTGAATGCCCAGGGTTCATTCCCAGGCCTACTTGGGCTCCTCTGCAGCAGTCACATGCCCAGAGGGAGCCCCCTCCGCTGTAGGCTTCTTCCGTGGCCCCCCAGATGGTATGGCAGTCTC-CCTGTCTGTCACCATGAGTGAACTTTTTCCTCGGCATCCACCCAAACAACTA---CTAGAGGTTCATCCACTCTTCATGCTCCAAGGT---TCCAG-A-CCTGAGTCATCTGC-------------------CCAC----TGTCCACCCTCAACCACCCCAGGTTTGCTGGTCTTCCAG--ACTAGTGTGACCAGAATGAACAGGGCAAGGAAGCCTTGTATGCTGACCTGATAACTTTCCAC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 200930 10 + 75148670 I e papAnu2.chr16 212171 82 + 74645514 I e rheMac3.chr16 221340 148 + 80904711 I e macFas5.chr16 229876 82 + 80997621 I a score=3321.000000 s hg38.chr17_GL383563v3_alt 330112 1 + 375691 G s panTro4.chr17 303675 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186303 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295684 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221488 1 + 80904711 G i rheMac3.chr16 I 148 C 0 s macFas5.chr16 229958 1 + 80997621 G i macFas5.chr16 I 82 C 0 s chlSab2.chr16 200940 1 + 75148670 G i chlSab2.chr16 I 10 C 0 s calJac3.chrUn_GL286409 1012873 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75942133 1 + 122082543 G i mm10.chr11 C 0 I 8 s canFam3.chr9 15772212 1 - 61074082 A i canFam3.chr9 C 0 C 0 e papAnu2.chr16 212171 82 + 74645514 I a score=269995.000000 s hg38.chr17_GL383563v3_alt 330113 100 + 375691 CTAACCCGAGGGCGGTATGTGCATCCT-CAGCACCTGCCCATCC---------------------GGCACC-A--TCCTCTGATCCAGG--------------------------------------GAC-----------------------TGTGAGCAACAGGGCCC--CGTGGCCAGGACATCT s panTro4.chr17 303676 100 + 82630442 CTAACCCGAGGGCGGTGTGTGCATCCT-CAGCACCTGCCCATCC---------------------GGCACC-A--TCCTCTGATCCAGG--------------------------------------GAC-----------------------TGTGATCAACAGGGCCC--CGTGGCCAGGACATCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186304 100 + 73212453 CTAACGCGAGGGCGGTGTGTGCATCCT-CAGCACCTGCCCATCC---------------------GGCACC-A--TCCTCTGATCCAGG--------------------------------------GAC-----------------------TGTGAGCAACAGGGCCC--CGTGGCCGTGACATCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295685 101 - 81552678 CTAACCCGAGGGCGATGTGTGCATCCT-CAGCACCTGCCCATCC---------------------GGCACCAA--TCCTCTGATCCAGG--------------------------------------GAC-----------------------TGCGAGCAACAGGGCCC--CGTGGCCATGACATCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221489 100 + 80904711 CTAACCCGAGGGCGGTGTGTGCATCCG-TAGCACCTGCCCATCC---------------------GGCACC-A--TCCTCTGACCCAGG--------------------------------------GAC-----------------------TGCGAACAACAGGGCCC--CGTGGCCATGACATGT i rheMac3.chr16 C 0 I 1 s macFas5.chr16 229959 100 + 80997621 CTAACCCGAGGGCGGTGTGTGCATCCG-TAGCACCTGCCCATCC---------------------GGCACC-A--TCCTCTGACCCAGG--------------------------------------GAC-----------------------TGCGAACAACAGGGCCC--CGTGGCCATGACATGT i macFas5.chr16 C 0 I 1 s papAnu2.chr16 212253 100 + 74645514 CTAACCCGAGGGTGGTGTGTGCATCCG-TAGCACCTGCCCATCC---------------------GGCACC-A--TCCTCTGACCCAGG--------------------------------------GAC-----------------------TGCGAACAACAGGGCCC--CGTGGCCATGACATGT i papAnu2.chr16 I 82 I 1 s chlSab2.chr16 200941 100 + 75148670 CTAACCCAAGGGCGGTGTGTGCATCCT-TAGCACCTGCCCATCC---------------------GGCACC-A--TCCTCTGACCCAGG--------------------------------------GAC-----------------------TGCGAGCAACAGGGCCC--CGTGGCCAAGACATGT i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 1012874 99 - 1291538 CTAACTCGAGGGCGGTGGGTGCATTAT-TAGCACCCAACCACCA---------------------GGCACC-A--TCCTCTGATCCACT--------------------------------------AAC-----------------------TGCGGACACCA-GGCCC--AGTGGCCACGGCCCCT i calJac3.chrUn_GL286409 C 0 I 251 s mm10.chr11 75942142 171 + 122082543 TTAACACACTGG------------CTT-AAGCACCTGCCAGTCCTTTCCTAAGGAGGGAGGCGCAGGGACC-AATTTATCTTCTCCAGGAGGACGACATGATTACTTACACCTGAAGAAGGAAGCTAGACAGTCAGAATGAACGTCCATCATATACTGACAGCAGAGGCC---ATGGCCTTGCTTTGC i mm10.chr11 I 8 I 11 s canFam3.chr9 15772213 100 - 61074082 CTAACATGTAGGGAGTATATGCATCCTCTGGCATCTCTCAATCC---------------------AGCATC-T--TCCTGCAGTGTAGG--------------------------------------AAT-----------------------CAT-AGCAAGAAGGCCTAGCACTGCTACAGCCC-- i canFam3.chr9 C 0 C 0 a score=136771.000000 s hg38.chr17_GL383563v3_alt 330213 42 + 375691 CTCACCCTCCAGTTAAAATCTCGCCA----------------------------GTTGAGTCTGCCCATG s panTro4.chr17 303776 42 + 82630442 CTCACCCTCCAGTTAAAATCTCGCCA----------------------------GTTGAGTCTGCCCATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186404 42 + 73212453 CTCACCCTCCAGTTAAAATCTCGCCA----------------------------ACTGAGTCTGCACATG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295786 42 - 81552678 CTCACTCTCCAGTTAAAATCTCGCCA----------------------------ACTGAGTCTGCACATG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221590 42 + 80904711 CTCACCCTCCAGGTAAAATCTCGCCA----------------------------GTTGAGTCTGCACGTG i rheMac3.chr16 I 1 C 0 s macFas5.chr16 230060 42 + 80997621 CTCACCCTCCAGGTAAAATCTCGCCA----------------------------GTTGAGTCTGCACGTG i macFas5.chr16 I 1 C 0 s papAnu2.chr16 212354 42 + 74645514 CTCACCCTCCAGGTAAAATCTCGCCA----------------------------GTTGAGTCTGCACGTG i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 201042 42 + 75148670 CTCACCCTCCAGGTAAAATCTCACCA----------------------------ATTGAGTCTGCACATG i chlSab2.chr16 I 1 I 397 s calJac3.chrUn_GL286409 1013224 42 - 1291538 CTCACCCTCCAGTCAGAATATCACCA----------------------------GCTGAGTCTGAATGTG i calJac3.chrUn_GL286409 I 251 C 0 s mm10.chr11 75942324 70 + 122082543 TTCTCTTCCCAGCCCAAAATGCATCACCAGCACAGGGCTCCGCCATCACTGCTTGCTCAGTCTCTAAATA i mm10.chr11 I 11 I 2 s canFam3.chr9 15772313 42 - 61074082 CTCACTCTCCAGTCAAAACCTCACTA----------------------------AACGGGTTTGAATGTG i canFam3.chr9 C 0 C 0 a score=556533.000000 s hg38.chr17_GL383563v3_alt 330255 162 + 375691 AAAGTAGGCGCTGAACTGCCCGATAAATCCAC----AAGTAAGAGTTGCAAGAAGGAGCCAAAAAGGGCTGAGCTGAATGACTCATATATGAAA------TAATTTGATAATTAATATAAATAGGAAATTTAAAGTCTCCAGCTGAGTGAC-AGAAAACACC-TTAA---------------------------------AAAGCTC s panTro4.chr17 303818 160 + 82630442 AAAGTAGGCGCTGAACTGCCCAATAAATCCAC----AAGTAAGAGTTGCAAGAAGGAGCCAAAAAGGGCTGAGCTGAATGACTCATAT--GAAA------TAATTTGATAATTAATATAAATAGGAAATTTAAAGTCTCCAGCTGAGTGAC-AGAAAACACC-TTAA---------------------------------AAAGCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186446 162 + 73212453 AAAGTAGGTCCTGAATTGCCCAATAAATCCAC----AAGTAAGAGTTGCAACAAGGAGCCAAAAAGGGCTAAGCTGAATGACTCATATATGAAA------TAATTTGATAATTAATATAAATAGGAAATTTAAAGTCTCCAGCTGAGTGAC-AGAAAACACC-TTAA---------------------------------AAAGCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295828 162 - 81552678 AAAGTTGGTGCTAAATTGCCTAATAAATCCAC----GAGTAAGAGTTGCAAGAAGGAGCCAAAAAGGGCTAAGCTGAACGACTCACATATGAAA------TAATTTGATAATTAATATAAATAGGAAATTTAAAGTCCACAGCTAAGTGAC-AGAAAACACC-TTAA---------------------------------AAAGCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221632 195 + 80904711 AAAGTAGGTGCTGAATTGCCTAATAAATCCAC----ACGTGAGAGGTGCAAGAAGGAGCCAAAAAGGGCTGAGCTGAATGACTCGTATATGAAA------TAATGTGATCATTAATATAAATAGGAAATTTAAAGTCCTCAGCTGAGTGAC-AGAAAACACC-TTAAAAAGCTCAAGAGAAATGAAGAAAATAAACCTATAAAGCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 230102 162 + 80997621 AAAGTAGGTGCTGAATTGCCTAATAAATCCAC----ACGTGAGAGGTGCAAGAAGGAGCCAAAAAGGGCTGAGCTGAATGACTCATATATGAAA------TAATGTGATCATTAATATAAATAGGAAATTTAAAGTCCTCAGCTGAGTGAC-AGAAAACACC-TTAA---------------------------------AAAGCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 212396 162 + 74645514 AAAGTAGGTGCTGAATTGCCTAATAAATCCAC----ACGTGAGAGGTGCAAGAAGGAGCCAAAAAGGGCTGAGCTGAATGACTCGTATATGAAA------TAATGTGATCATTAATATAAATAGGAAATTTAAAGTCCTCAGCTGAGTGAC-AGAAAACACC-TTAA---------------------------------AAAgctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 201481 162 + 75148670 AAAGTAGGTGCTGAATTGCCTAATAAATCCAC----ACGTGAGAGGTGCAAGAAGGAGCCAAAAAGGGCTGAGCTGAATGACTCGTATACGAAA------TAATGTGATCATTAATATAAATAGGAAATTTAAAGTCTTCAGCTGAGTGAC-AGAAAACACC-TTAA---------------------------------AAAGCTC i chlSab2.chr16 I 397 C 0 s calJac3.chrUn_GL286409 1013266 166 - 1291538 AATGTAGGTGCTGAAATGCTTAATAAATCCACAGGTAGGTAAGAGTCAAAAGAAGGAGCCAGAAAGAAATAAGCTGAATGACTGATACACAAAA------TAATCTGAAAATTAATATAAATAGCAAATTAAAAGTCCCCAGCTAAGTGAC-AGAAAACACC-TTAA---------------------------------AAAGCCC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75942396 162 + 122082543 AGAGCAAATGCTAAAATGCTTAATCCCCGAAT----ACGTAAAGTTTGCAAAAAGGAGGCAAAGATGA-TAAAC--AGCAATTCACATAGAAAAAATAAGTAATTTGACAATTAATACACGTAAGGAGT--GAAGTTGCTAACTTATAGAC--TATGACACT-TTAA---------------------------------AAAGTTC i mm10.chr11 I 2 I 1576 s canFam3.chr9 15772355 165 - 61074082 AAAGTAGGAACCAAATTGTTTAATGAATCCAT----ATGTAAGATCTGCAAGAAGGAGGCTAAAAGGGGTAAACTGAATGATTCGTACATGAGA-----GTAATTTGATACTTAATATAAAGAGGAAATAAAAGTTTCCTAGGTAAATGACTGAAAAACACCTTTAA---------------------------------AAAGCTG i canFam3.chr9 C 0 C 0 a score=201925.000000 s hg38.chr17_GL383563v3_alt 330417 66 + 375691 AAGAGAGAGGA-----AAGGAAGAAAATAAAC----CTATAATTGCAAAATAAAAGCATTGAAAGAAGCCGTGCT s panTro4.chr17 303978 66 + 82630442 AAGAGAGAGGA-----AAGGAAGAAAATAAAC----CCATAATTGCAAAATAAAAGCATTGAAAGAAGCCGTGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186608 66 + 73212453 AAGAGAGAGGA-----AAGGAAGAAAATAAAC----CTATAATTGCAAAATAAAAGCATTGAAAGAAGCTGTGCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 295990 66 - 81552678 AAGAGAGAGGA-----AACGAAGAAAATAAAC----CTATAATTGCAAAATAAAAGCATTGAGAGAAGCTGTGCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221827 61 + 80904711 AACA-----GA-----AATGAAGAAAATAAAC----CTACAATTGCAAAATCAAAGCATTACAAGAAGGTGTGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 230264 61 + 80997621 AACA-----GA-----AATGAAGAAAATAAAC----CTATAATTGCAAAATCAAAGCATTACAAGAAGGTGTGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 212558 61 + 74645514 aaga-----ga-----aatgaagaaaataaac----ctaTAATTGCAAAATCAAAGCATTACAAGAAGGTGTGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 201643 61 + 75148670 AAGA-----GA-----AATGAAGAAAATAAAC----CTATAATTGCAAAATCAAAGCATTACAAGAAGGTGTGCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1013432 65 - 1291538 GAGAGGGCAGA-----AACGAATAAAATAAAC----CTATAATTGCAAAATAAAAGCA-TAAAAGAAGCTGTGTT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75944134 75 + 122082543 AAGAGAGAGAAGATCCAAGGAGGGAAATGAAAACAGCTAGAACTGCAAAACAAAAGCATTAGAAGAAACCTTGGT i mm10.chr11 I 1576 C 0 s canFam3.chr9 15772520 65 - 61074082 AAGAGGAAGGA-----AATTAGGAAAATGATT----CTGTTCCTGAAAAATAAAAGCATTAAAA-AACCCATGCT i canFam3.chr9 C 0 I 642 a score=102179.000000 s hg38.chr17_GL383563v3_alt 330483 41 + 375691 CAAGGTAAGATGCTACAGATGCAATAAATTCATGTTTTA-AC s panTro4.chr17 304044 41 + 82630442 CAAGGTAAGATGCTACAGATGCAATAAATTCATGTTTTA-AC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186674 41 + 73212453 CAAGATAAAATGCTACAGATGCGATAAATTCATATGTTA-AC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 296056 41 - 81552678 CAAGATAAAATGTTACAGATGTGATAAATTCCTATGTAA-AC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221888 41 + 80904711 CAAGATAACATGCTACAGATGTGATCGATTCATATTTTA-AC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 230325 41 + 80997621 CAAGATAACATGCTACAGATGTGATCGATTCATATTTTA-AC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 212619 41 + 74645514 CAAGGTAACATGCTACAGATGTGATCGATTCATATTTTA-AC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 201704 41 + 75148670 CAACATAACATGCTACAGATGTGATCGATTCATATTTTA-AC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1013497 41 - 1291538 TGAGATAAAATGCGACAAATGTGATAAATTCATGTTTTA-AC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75944209 34 + 122082543 GAAGG---CATGTTACAAACAC-----ACGCTTGTGTTACAC i mm10.chr11 C 0 C 0 e canFam3.chr9 15772585 642 - 61074082 I a score=343650.000000 s hg38.chr17_GL383563v3_alt 330524 110 + 375691 ATTAGCAACGTGTGGGCAACGGTGTTCCCTGGGGAACT----------GGCTGCATGAAGCCTCTCTGGAGAGCTGGGCCAGGCCAGTGGGAGGGCAGCTGGCAC-----GG-CCGGGGCTGGTGC s panTro4.chr17 304085 110 + 82630442 ATTAGCAACGTGTGGGCAACGGTGTTCCCTGGGGAACT----------GGCTGCATGAAGCCTCTCTGGAGAGCTGGGCCAGGCCAGTGGGAGGGCAGCTGGCAC-----GG-CCGGTGCTGGTGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186715 110 + 73212453 ATTAGCAATGTGTGGGCAACGGTGTTCCCTGGGGAACT----------GGCTGCATGAAGCCTTTCTGGAGAGCTGGGCCAGGCCAGTGGGAGGGCAGCTGGCAG-----GG-CTGGGGCCGGTGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 296097 110 - 81552678 ATTAGTAATGTGTGGGCAGTGGTGTTCCCTGGGGAACT----------GGCTGCATGAAGTCTTTCTGGAGAGCTGGGCCAGGCCAGTGGGAGGGCAGCTGACAT-----GG-CTGGGGCTGGTGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 221929 110 + 80904711 ATTAGAAATACGTGGGGCATGGTGTTCCCTGGACAACC----------GGCTGCATGAAGGCTTTCTGGAGGGCAGGGCCAGGCCAGCGGGAAGGCAGCTGGCAC-----AG-CTGGGGCTGGTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 230366 110 + 80997621 ATTAGAAATGCGTGGGGCATGGTGTTCCCTGGACAACC----------GGCTGCATGAAGGCTTTCTGGAGGGCAGGGCCAGGCCAGCGGGAAGGCAGCTGGCAC-----AG-CTGGGGCTGGTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 212660 110 + 74645514 ATTAGAAATGTGTGGGGCATGGTGTTCCCTGGACAACC----------GGCTGCATGAAGGCTTTCTGGAGGGCTGGGCCAGGCCAGCGGGAAGGCAGCTGGCAC-----AG-CTGGGGCTGGTGC i papAnu2.chr16 C 0 I 244 s chlSab2.chr16 201745 110 + 75148670 ATTAGTAATGCGTGGGGCATGGTGTTCCCTGGACAACT----------GGCTGCATGAAGCCTTTCTGGAGGGCTGGGCCAGGCCAGCGGGAAGGCAGCTGGCAT-----AG-GTGGGGCTGGGGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1013538 109 - 1291538 ATTAGTAATGTGTGGGCAGTAGTGCTACCTGGAGAACT----------GGCTGCATGAAGCCTTTCTGGAG-GCTGGGCTGGGCCCGTGGGAGGGCAGCTGGCAT-----GG-CTGGCGCCAGTGT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75944243 98 + 122082543 AT----------------GCAGTGTTACTCTGTGACTT----------AGCTGTACAATGTCCTTCT-CAGGGGTAGTCTGGGTCAGTGGGACAGTGGTTGGCATGACAGGG-CCAGAGCTGCTGT i mm10.chr11 C 0 I 4 s canFam3.chr9 15773227 118 - 61074082 attGGAAATGTGTTGAC-ACAGTGTTACGCTGTGAACTAGCTGCATACAGCTGCATACAGCCCCTCTGGAGAGCTGGGCCATGCCAGCAGGAA--CGGCAGGCAC-----AGACCTGGGCTGAGCT i canFam3.chr9 I 642 C 0 a score=119867.000000 s hg38.chr17_GL383563v3_alt 330634 32 + 375691 GGGG----TCCTGAGGCCAGAGCCTGCCAGAGGGCC s panTro4.chr17 304195 32 + 82630442 GGGG----TCCTGGGGCCAGAGCCTGCCGGAGGGCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186825 32 + 73212453 GGGG----TCCTGGGGCCAGGGCCTGCCAGAGGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 296207 32 - 81552678 GGGG----TCCTGGGGCCAGAGCCTGCCGGAGGGCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 222039 32 + 80904711 GGGG----TCCTGGGGCCAGGGCCTGCCGGACGGCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 230476 32 + 80997621 GGGG----TCCTGGGGCCAGGGCCTGCCGGACGGCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 213014 32 + 74645514 GGGG----TCCTGGGGCCAGGGCCTGCCGGACGGCA i papAnu2.chr16 I 244 C 0 s chlSab2.chr16 201855 32 + 75148670 GGGG----TCCTGGGGCCAGGGCCGGCCGGACGGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1013647 32 - 1291538 GGGG----TCCTGGGGCCAGGGCTTGTGGGAGGGCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75944345 36 + 122082543 GGGGTTGCTCCTTAGGCCAGTGGGTACAGGGGGGTC i mm10.chr11 I 4 I 1244 s canFam3.chr9 15773345 32 - 61074082 GGGG----GCCAGGGGCCAGAGCCTGCCGGAGGGTG i canFam3.chr9 C 0 C 0 a score=1494453.000000 s hg38.chr17_GL383563v3_alt 330666 510 + 375691 GTCCCCAAGGACCAACAGGCACGGGAGAGGCAGAATATAAACGCAG-TCAGGGAGTAAAGGCTGTGCATTCTCCCCGGGTATTGCCTCCACCACCCCCGGGCCAC-ACTCGGGCCTGCCCAGTTCCCCTAGCTCTTCTCTTTCCTG-CCTTGCCTGCCTAAGGCCCCTCTCCCCCTG----CACTCCACTCGT--ATCTGCTTCTCCGCCTCCTGCCC-AGTCAGCCTGCTGTGCAGAGCTCCCGCAGCTGCCTCAGATCCACCCTTCCTGGGTGGCTGCTCCTCCCCGCCACCGCCCTAGGAGCACCCCAAGTAAAATCTGGTTTTTCTCCCCTCCAGGTctgcctctgcctttgctcctgctatccccagggccccaggtgcccctcc-ctccacctcat-ccttctggacccagcaaat-gtcctccaccaggaggcctttctggacctcctcatcctc-ctggaaggag---cctctcccaccccgaagtcctttaactatttactcgtccctctccttcgta s panTro4.chr17 304227 510 + 82630442 GTCCCCAAGGACCAACAGGCATGGGAGAGGCAGAATATAAACGCAG-TCAGGGAGTAAAGGCTGTGCATTCTCCCCGGGTATTGCCTCCACCACCCCCGGGCCAC-ACTCGGGCCTGCCCAGTTCCCCTAGCTCTTCTCTTTCCTG-CCTTGCCTGCCTAAGGCCCCTCTCCCCCTG----CACTCCACTCAT--ATCTGCTTCTCCGCCTCCTGCCC-AGTCATCCTGCTGTGCAGAGCTCCCGCAGCTGCCTCAGATCCACCCTTCCTGGGTGGCTGCTCCTCCCCGCCACCGCCCTAGGAGCACCCCAAGTAAAATCTGGTTTTTCTCCCCTCCAGGTctgcctctgcctttgctcctgctatccccagggccccaggtgcccctcc-ctccacctcat-ccttctggacccagcaaat-gtcctccaccaggaggcctttctggacctcgtcatcctc-ctggaaggat---cctctcccaccccgaagtcctttaactatttacttgtccctctccttcgta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 186857 513 + 73212453 GTCTCCAAGGACCAACAGGCATCGGAGAGGCAGGATATAAACGCAG-TCAGGGAGTAAAGGCTGTGCATTCTCCCAGGGCATTCCCTCCACCACCCCCGGGCCAC-ACTCGGGACTGCCCGGTCCCCCTAGCTCTTCTCTTTCCTG-CCTTGCCTGCCCGAGGCCCCTCTCACCCTG----CGCTCCACTCAT--ATCTGCTTCTCCGCCTCCTGCCC-AGTCGGCCTGCTGTGCAGAGCTCCTGCAGCTGCCTCAGATCCACCCTTCCTGGGTGGCTGCTCCTCCCCACTACCACCCTAGGAGCACCCCACATAAAATCTGGTTCTTCTCCCCTCCAGGTctgcctctgcctttgctcctgctatccccagggccccaggtgcccctcc-ctccacctcgt-ccttctggacccagcaaat-gtcctccaccaggaggcctttcttgacctcctcatcctc-ctggaaggagcctcctctcccactccgaagtcctttaactatttacctgcccctctccttcata i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 296239 510 - 81552678 GTCCCCAAGGACCAACAGGCATGGGAGAGGCAGGATATAAACCCAG-TCGGGCAGTAAAGGCTGTGCATTCCCCCCGAGCATTGCCTCCAACACCCCCTGGCCAC-ACTCAGGCCTGCCCGGTTCCCCTCGCTCTTTTCTTTCCTG-CCTTGCCTGCCCGAGGCCCCTCTCACCCTG----CGCTCCACACAC--ACCTGCTTCTCCGCCTCCTGCCC-AGTCGGCCTGCTGGGCGGAGCTCCTGCAGCTGCCACAGATCCACCCTTCCTGGGTGGCTGCTCCCCCCCCCCACCGCCCCAGGAGCACCCCAAGTAAAATCTGGTTCTTCTCCCCTCCAAGTCTGCCTCTGCCTTTGCTCCTGCTACCCCCAGGGCCCCAGGTGCCCCTCC-CTCCACCTCATGCTTTCTGGACCCAGC-AAT-GTCCTCCACCAGGAGGCCTTCCTTGACCTCCTCACCCTC-CAGGAAGAGG---CCTCTCCCACCCCGACGTCCTTTAACCGTTTACCTGTCCCTCTCCTTCATA i nomLeu3.chr19 C 0 M 100 s rheMac3.chr16 222071 511 + 80904711 GTCCCCAAGGACCAACAGGCGTGGGAGAGGCAGGATATAAACCGAG-CTGGGGAGTAAAGGCTGTGCATTCTTGCGGGGCATTGCCTCCACCACCCCCGGGCCACAACTCGGGCCTGCCCGGTTTCCCTAGCTCTTCTTTCTCCTG-CCCTGCCTACCCGAGGCCCCTCTCACCCTG----CGCTCCACTCAT--CTCTGCTTCTCCCCAACCTGCCC-AGCTGGTCTGCTGTGTGGAGCTCCTGCAGCCGCCTCAGATCCACCCTTCCTGGGTGGCCGTTCCTCCCCACCACTGCCCTAGGGGCACCTCAAGCAAAATCTGGTTCTTCTCCCCTCCAGGTctgcctctgcctttgctcctgctatccccagggccccaggcgcccctcc-ctccacctcat-ccttccggacccagcaaat-gtcctccaccgggaggcctttcttgacctccctaccctc-ctggaaggaa---cctctcccagcccaaactcccataactagttgcctgtccctttgcttcctg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 230508 511 + 80997621 GTCCCCAAGGACCAACAGGCGTGGGAGAGGCAGGATATAAACCGAG-CTGGGGAGTAAAGGCTGTGCATTCTCGCGGGGCATTGCCTCCACCACCCCCGGGCCACAACTCGGGCCTGCCCGGTTTCCCTAGCTCTTCTTTCTCCTG-CCCTGCCTACCCGAGGCCCCTCTCACCCTG----CGCTCCACTCAT--CTCTGCTTCTCCCCAACCTGCCC-AGCTGGTCTGCTGTGTGGAGCTCCTGCAGCCGCCTCAGATCCACCCTTCCTGGGTGGCCGCTCCTCCCCACCACTGCCCTAGGGGCACCTCAAGCAAAATCTGGTTCTTCTCCCCTCCAGGTCTGCCTCTGCCTTTGCTCCTGCTATCCCCAGGGCCCCAGGCGCCCCTCC-CTCCACCTCAT-CCTTCCGGACCCAGCAAAT-GTCCTCCACCGGGAGGCCTTTCTTGACCTCCCTACCCTC-CTGGAAGGAA---CCTCTCCCAGCCCAAACTCCCATAACTAGTTGCCTGTCCCTTTGCTTCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 213046 508 + 74645514 GTCCCCAAGGACCAACAGGCGTGGGAGAGGCAGGATATAAACCCAG-CTGGGGAGTAAAGGCTGTGCATTCTCGCGGGGCATTGCCTCCACCACCCCCGGGCCACAACTCGGGCCTGCCCGGTTCCCCTagctcttctttctcctg-ccctgCCTACCCGAGGCCCCTCTCACCCTG----CGCTCCACTCAT--CTCTGCTTCTCCCCAACCTGCCC-AGCTGGTCTGC---GCGGAGCTCCTGCAGCCGCCTCAGATCCACCCTTCCTGGGTGGCCGCTCCTCCCCACCACTGCCCTAAGGGCACCTCAAGCAAAATCTGGTTCTTCTCCCCTCCAGGTCTGCCTCGGCCTTTGCTCCTGCTATCCCCAGGGCCCCAGGCGCCCCTCC-CGCCACCTCAT-CCTTCTGGACCCAGCAAAT-GTCCTCCACCGGGAGGCCTTTCTTGACCTCCCCACCCTC-CTGGAAGGAA---CCTCTCCCACCCCAAACTCCCATAACTAGTTGCCTGTCCCTTTGCTTCCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 201887 493 + 75148670 GTCCCCAAGGACCG--------TGGAGAGGCAGGATATAAACCGAG-CTGGGGAGTAAAGGCTGTGCATTCTCGCGGGGCATTGCCTCCACCACCCCCAGGCCAC-ACTCGGGCCTGCCCCGGTTCCCCAGCTCTTCTTTCTCCTG-CCCTGCCTACCCGAGGCCCCTCTCACCCTG----CGCTCCCCTCAC--ATCTGCTTCTCCCCAACCTGCCC-AGCTGGTCTGT---GCGGAGCTCCTGCAGCCGCCTCAGATCCACGCTTCCTGGGTGGCCGCTCCTCCCCACCACCGCCCTAGGGGCAcctcaagcaaaatctggttcttctcccctccaggtct------gcctttgctcctgctatccccagggccccaggtgcccctcc-ctccacctcat-ccttccggacccagcaaat-gtcctccaccaggaggcctttcgtcacctccccaccctc-ctggaaggag---cctctcccaccccaaactcccataactagttgcctgtccctttgcttcgtg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1013679 503 - 1291538 GTCCCCAAGGGCCAACAGGCATGGGAGAGGCAGGATATACACCACG-TCAGGGAGTAAAATCTGTGCACCCTCCCAGGACACTGCCCCCACCACCGCC-GGCTAC-ACTTGGGCCTGCCTGCCTCCCGT-GTTCCTCTCTGT-CTG-CCCTGCCTGCCCGAAGGCCCTCTCGGCCCG----TGCTCCACTCAT--ATCTGCTTCTCCCACTCCTGCCC-AGTTGGCCTGCTATGCAGAGCTCCTGCAGCCGGCTCAGATCTGCCCTTCCTGAGTGGCCACTCCTCCCCGCCGCCACCCCAGGAGCACCCCAAATGAACCCTGGCTTTGCTCCTCTCCAGTTCTGCCTCTGCCTTTGCTCCTGACATCCCCAGGGCCCCAGGTGCCGTTCC---TCATCTTAT-CCTTCCAGACCTAGCACCT-GTCC-CCACCAGGGGGCCTTTCTGGACGTCCCCATCCTC-CTGGAAG-AG---CCTCTCCCACCCGACAGGCCCTTCCCCACGTGCCTGTCCCTTTCCCTCACA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15773377 456 - 61074082 GTCTCCAAGG-TTGACGGGCGCAGGAGAAGCAGGATATAAACTGAGACTGAAGAATGAAGGCTGCCAGGCCTCCCCAGGTACTGCCTCCGCCACTCCCTGG---------------GTCTAATTTCCCCAGCTCTCCTCCGGCCTGCCCCTGCCTACCTGAGGTCTCTCCCACCCCATCCCTGCTCCACCCACAAACCTGCTGCCACCCGTGCTGCCCGAGGAAGCCTGT-GGGCACAGCTCCAGCAACTGACTCC-----------------------CGCCTCCCCACCGCTGCCCTAACTGTACCCGAAGT-AATTCTGGCCCTTCTCTCCTCCAGCT--------------------------CCCAGGGCCTCAGATGATCCTCCCCTCCACCTCAT-CCTCATAGACCCAGCAAATGGTGCTCTACCGGGAAGCCTTCCTTGGTCTCCCTGTCCTCTCTGAAAGCAG---CCTCTGCTCCCCTGAGGTCCTTTAGCTCTTCACTGTCCCCCCGGATCAGTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I a score=74482.000000 s hg38.chr17_GL383563v3_alt 331176 30 + 375691 ctgagcttatgct-----------gtatttgtttatgtgct s panTro4.chr17 304737 30 + 82630442 ctgagcttatgct-----------gtatttgtttatgtgct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 187370 30 + 73212453 ctgagcttatgct-----------gtatttctttatgtgct i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 222582 30 + 80904711 ctgagcttaggct-----------gtatttgttcatgtact i rheMac3.chr16 C 0 C 0 s macFas5.chr16 231019 30 + 80997621 CTGAGCTTAGGCT-----------GTATTTGTTCATGTACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 213554 30 + 74645514 CTGAGCTTATGCT-----------GTATTTGTTCATGTACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 202380 30 + 75148670 ctgagcttatgct-----------gtatttgttcatgtact i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1014182 30 - 1291538 CTGAGCCTATGCT-----------GCATCTATTTATGTGCT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15773833 41 - 61074082 CAGAGCATCCGCTGCCGTATGTTGGTATTTGTTTATGTCTT i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I e nomLeu3.chr19 296749 100 - 81552678 M a score=69546.000000 s hg38.chr17_GL383563v3_alt 331206 27 + 375691 tatcttcta--ctgggctCATCTCTGTAA s panTro4.chr17 304767 27 + 82630442 tatcttctA--CCGGGCTCATCTCTGTAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 187400 27 + 73212453 tatcttctA--CCGGGATCATCTCTGTAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 296849 27 - 81552678 TATCTTCTA--CCGGGCTCATCTCCGTAT i nomLeu3.chr19 M 100 C 0 s rheMac3.chr16 222612 27 + 80904711 tatcttcta--ctggactCCTCTCTGTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 231049 27 + 80997621 TATCTTCTA--CCGGACTCCTCTCTGTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 213584 27 + 74645514 TATCTTCTA--CCGGACTCATCTCTGtat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 202410 27 + 75148670 tatcttcta--ccggactCCTCTCTGTAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1014212 26 - 1291538 TATCTTCT---CCTGGCTCATCTCTGCAT i calJac3.chrUn_GL286409 C 0 I 313 s canFam3.chr9 15773874 29 - 61074082 TGCTTCCCAGGCAAAGCCTGTGTCTGCTT i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I a score=2311739.000000 s hg38.chr17_GL383563v3_alt 331233 838 + 375691 ----CCT-----TTTTATTCTTTTattcattcattccacaaatactaattgagcacctactatgtgccagaccccatgctaggactggggacacaatgatgagc---------------------------------------aagacagacactgtccctgccaccctggaactcccatcttggagagaaacaacaaaaacaaaacacgaagcaaataaacatt-agtaaacacgtcaggataagcggcgatataggctgggatagaaaggtgta-gg-tgatgtgagaggcgagtgtccgtgcggacagaggagctgggggaggagactctga-------------------ggccagaggtgtgagcggagtgagtcgggCAC--GCTT-TCCAGACACAAAATCGGTGTTTGCTAAACATGCGTGGAACAAATGAGTGGC--TAACAAGCCAGAAATCCCAAGCGCGTGCCCCGTGTCGCTCCAGACACAACTTCCCCACCCTCATCACCCTG-TGGGTC-ACTCCGACTGGCACCCAGACGCGTTTCCCAGCCCACACGCCTGC------TACGGGGC----CCACCTGTGTCACCCTC---------GCAGAGGCGCTTACCAGGACTCAAGGGGCTCTCCGCTCAGAACCCCTCATGGCCTCCCTGACACCACCAGCG-GCCCTCGGGCTGGACAGCAAGCGGGTTTTGTCTCGCCTGCAGACTCCAGC-------------------CCCGGAGCACCACGCATGGAAGCGCAGCgaggccgcccctgggctcggtgggaaagagccctgatc------gactggtggcgtctgccaggggacggcagaagacagaga---ggcacatttgccacgtattttccTtgtcacccagggctccgcaaatgaccactcaggcaagaaatctccttcaggtctaattgcctggacgagc s panTro4.chr17 304794 838 + 82630442 ----CCT-----TTTTATTCTTTTattcattcattccacaaatactaattgagcacctactatgtgccagaccccatgctaggactggggacacaatgatgagc---------------------------------------aagacagacactgtccctgccaccctggaactcccatgttggagagaaaaaacaaaaacaaaacacgaagcaaataaacatt-agtaaaCACGTCAGGATAAGCGGCGATACAGGCTGGAATAGAAAGGTGTA-GG-TGATGTGAGAGGCGAGTGTCCGTGCGGACGGAGGAGCTGGGGGAGGAGACTCTGA-------------------GGCCAGAGGTGTGAGCGGAGTGAGTCGGGCAC--GCTT-TCCAGACACAAAATCGGTGTTTGCTAAACATGCGTGGAACAAATGAGTGGC--TAACAAGCCAGAAATTCTGAGCGTGTGCCCCGTGTCGCTCCAGACACAACTTCCTCACCCTCATCACCCTG-TGGGTC-ACTCCGACTGGCACCCAGACGCGTTTCCCAGCCCACACGCCTGC------TACGGGGC----CCACCTGTGTCACCCTC---------ACAGAGGCGCTTGCCAGGACTCAAGGGGCTCTCCGCTCAGAACCCCTCATGGCCTCCCTGACACCACCAGCG-GCCCTCGGGCTGGACAGCAAGCGGGTTTTGTCTCGCCTGCAGACTCCAGC-------------------cccggagcaccacgcgtggaagcacggcgaggccgcccctgggctcggtgggaaagagctctgatc------gactggtggcgtctgccagggaatggcagaagacagaga---ggcacatttgccacgtattttccTTGTCACCCAGGGCTCCACAAatgaccactcaggcaagaaatctccttcgggtctaattgcctggacgagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 187427 854 + 73212453 ----CCT-----TTTTATTCTTTTattcattcattccacaaatactaattgagcacctactatgtgccagaccccatgctaggactggggacacaatgatgagc---------------------------------------aagacagacactgtccctgccaccctggaattcccatcttggagagaaaa---aaaaaaaaaacgtgaagcaaataaacatt-agtaaatatgtcaggataagcggcgatataggctgggatagaagggtgta-gg-tgatgcgagaggcgagtgtccgtgcggacggaggagctgggggaggagactctgagaaagtgacattcaactggggccagaggggtgagcagagtgagtcGGGCAC--GCTT-TCCAGACACATAATTGGTGTTTGCTAAAC--GTGTGGAACAAATGAGTGGC--TAACAAGCCAGAAATCCCAAGGGTGTGCCTCGCGTCGCTCCAGACACTACTTCCCCACCCTTGTCACCCTGATGGGTCAACTCCAACTGGCACCCAGACGCATTTCCCAGCCCACACGCCTGC------TACGGGGC----CCACCTGTGTCACCCTC---------GCAGAGGCGCTTGCCCGGACTTGAGAGGATCTCCGCTCAGAACCCCTCATGGCCTCCCTGACACCACCAGCA-GCCCTCGGGCTGGACAGCAAGCGGGTTTTGTCTCGCCTGCAGACTCCACC-------------------cccggagcaccacgcatggaagcaccgcgaggccgcctctgggctcggtgggaaagagccctgatc------tatgggtggcgtctgccaggggacggcagaagacagaga---ggcacatttgccacgtgttttccTCGtcacccagggctccacaaatgaccactcaggcaagaaatctccttcaggtctaattgcctggacgagc i ponAbe2.chr17 C 0 I 21 s nomLeu3.chr19 296876 815 - 81552678 ----CCT-----TTTTATTCTTTTattcattcattccacaaatactaattgagca-ctactatgtgccagaccccatgctaggactggggacagaatgacgagc---------------------------------------aagacagacactgtccctgccatcctggaactcccatcttggagagaaaa---aaaaaaaaaaaatgaagcaaataaacatt-agtaaatatgtcaggataagcagccatataggctggggtggaaaggtgta-gg-tgatgcaa-----gagtgtccgtgcagacggaggagctgggggaggagactctgagaaagtgacattcaactggggccagaggggtaagcagagtgagGCGGGCACATGCTT-TccagacacataattggtgtttgctaaacgtctgtggaacaaatgagtGGC--TAACAAGCCAGAAAT-CCGAGTGTGTGCCCCGTGTCACTCCAGACACAACTTCCCCACCCTCGTCACCATG-ACGGTC-ACTCCGACCGGCGCCCAGACGCGTTTCCCAGCCCACGCACCTGC------TACGGGGC----CCAC-----------------------------------------CTTGAGGGGATCTCCGCTCAGAACCCCTCATGGCCTCCCTGACGCCACCAGCA-G-CCTCGGGCTGGACAGCAAGCGGGTTTT-TCTGGCCTGCAGACTCCACC-------------------CCCGGAGCACCACACAGGGAAGCCCGGCgaggccgcctctgggctcggtggggaacagccctgatg------gattggcgatgtctgccaggggacggcagaagacagaga---ggcacacttgccacgtattttccTTGTCACCCAAGGCTCCACAAatgaccactcaggcaagaaacctccttcaggtctaactgcctggatgagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 222639 852 + 80904711 ----CCT-----TTTTATTCTTTCattcattcattccacaaatactaattgagcgcctcctatgtgctagagcccacgctaggactggggacgcagtgatgagc---------------------------------------aagacagacactgtccctgccgtcctggaactcccatctcggagagaaaa--------caaaacacgaagcaaataaacacc-agcaaatacgtcaggacaagcggcgatatcggctgggatag-aaggtgga-gg-tgatg-gagaggcgagcgtcagtgcagacggaggaggtgggggaggagactc--agaaagcgacgttcgactggggccagaggggtgagcagcgcgagtcgggca---gCTC-TCCAGGCACATAATTGGTGGTTGCTGAACATGTGTGGAACAAATGAGCGGC--TAACAAGCCAGAAATTCCGAGCGTGTGCCCCGTGTCGCTCCAGACACAACTTCCCCACCCGTGTCACCCCGATGGGTC-CCTCCGACTGGCAACCAGGGGCATTTTCCAGCCCTCACGCCTCC------TACGGGGC----CCACCCGTGTCACCCGTGTCACCCGCGCAGAGGCGCTTGCCAGGACTTGAGAGGATCTCCGCTCAGAACCCCTCACAGCCTCCCTGACATCACCAGCA-GCCCTGGGGCTGCAGAGCAAGTGGGTTTTGTCTC-CCTGCAGACTCCAGC-------------------CCTGGAGCACCAGGCACAGACGCCCAGCGAGGCCACCTCTGCGCTC-GGGGGGAACAGCCCTGACG------GATCGGTGGTGTCCGCCAGGCGACGGCAGAACACACAGA---GGCACATTGGCCACGTATTTTCCTtgtcacccagggccccacaaatgaccactcaggcaagaaacctccttcaggtctaattgcctggacgagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 231076 852 + 80997621 ----CCT-----TTTTATTCTTTCattcattcattccacaaatactaattgagcgcctcctatgtgctagagcccacgctaggactggggacgcagtgatgagc---------------------------------------aagacagacactgtccctgccgtcctggaactcccatctcggagagaaaa--------caaaacacgaagcaaataaacacc-agcaaatacgtcaggacaagcggcgatatcggctgggatag-aaggtgga-gg-tgatg-gagaggcgagcgtcagtgcagacggaggaggtgggggaggagactc--agaaagcgacgttccactggggccagaggggtgagcagcgcgagtcgggca---gCTC-TCCAGGCACATAATTGGTGGTTGCTGAACATGTGTGGAACAAATGAGCGGC--TAACAAGCCAGAAATTCCGAGCGTGTGCCCCGTGTCGCTCCAGACACAACTTCCCCACCCGTGTCACCCCGATGGGTC-CCTCCGACTGGCAACCAGGGGCATTTTCCAGCCCTCACGCCTCC------TACGGGGC----CCACCCGTGTCACCCGTGTCACCCGCGCAGAGGCGCTCGCCAGGACTTGAGAGGATCTCCGCTCAGAACCCCTCACAGCCTCCCTGACATCACCAGCA-GCCCTCGAGCTGCAGAGCAAGCGGGTTTTGTCTC-CCTGCAGACTCCAGC-------------------CCCGGAGCGCCAGGCACAGACGCCCAGCGAGGCCGCCTCTGCGCTC-CGGGGGAACAGCCCTGACG------GATCGGTGGTATCCGCCAGGCGACGGCAGAACACACAGA---GGCACATTGGCCACGTATTTTCCTTGtcacccagggccccacaaatgaccactcaggcaagaaacctccttcaggtctaattgcctggacgagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 213611 850 + 74645514 ----cct-----ttttattctttcattcattcattccacaaatactaATTGAGCGCCTCCTATGTGCTAGAGCCCACGCTAGGACTGGGGACGCAGTGATGAGC---------------------------------------AAGACAGACACTGTCCCTGCCGTCCTGGAACTCCCATCtcggagagaaaa--------caaaacacgAAGCAAATAAACACC-AGTAAATACGTCAGGACAAGCGGCGATATCGGCTGGGATAG-AAGGTGGA-GG-TGATG-GAGAGGCGAGCGTCAGTGCAGACGGAGGAGGCGGGGGAGGAGACTC--AGAAAGCGACGTTCGGCTGGGGCCAGAGGGGTGAGCAGCGCGAGTCGGGCA---GCTC-TCCAGGCACATAATTGGTGGTTGCTGAACATGTGTGGAACAAATGAGCGGT--TAACAAGCCAGAAATCCCGAGCGTGTGCCCCGTGTCGCTCCAGACACAACTTCCCCACCCGTGTCACCCCGATGGGTC-CCTCCGACTGGCAACCAGGGGCATTTTCCAGCCCTCACGCCTCC------TACGGGGC----CCACCCGTGTCACCCGTGTCACCCGCGC--GGGCGCTCACCAGCACATGGGAGGACCTCCGCTCAGAACCCCTCACAGCCTCCCTGACATCACCAGCA-GCCCTGGGGCTGCGGAGCAAGCGGGTTTTGTCTC-CCTGCAGACTCCAGC-------------------CCCGGAGCACCAGGCACAGATGCCCAGTGAGGCCGCCTCTGCGCTC-GGGGGGAACAGCCCTGACA------GATTGGTGGTGTCCGCCAGGCGACGGCAGAACACACAGA---GGCACATTGGCCACGTATTTTCCTTGTCACCCAGGGCCGCACAAATGACCACTCAGGCAAGAAACCTCCTTCAGGTCTAATTGCCTGGACGAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 202437 847 + 75148670 ----CCT-----TTTTATTCTTTCacccattcattccacaaacactaattgagcgcctcctatgtgctagacccaacgctaggactggggatgcagtgatgagc---------------------------------------aagacagacactgtccctgccgtcctggaactcccatctcggagagaaaa--------caaaacacaaagcaaacaaacacc-agtaaatacgtcaggacaagcggcgatatcggctgggacagaaaggtgga-gg-tgatg-gagaggcgagcatcagtgcagacggaggaggtgggggaggagactctgagaaagcgacattcgactggggccagaggggtgagcagagcgagtcgggca---gctc-tccaggCACGTAATTGGTGTTTGCTGAACATGGGTGGAACAAATGAGTGGC--TAACAAGCCAGAAATCCCAAGCGTGTGCCCCGTGTCGCTCCAGACACAACTTCCCCACCCTTGTCACCCTGATGGATC-CCTCCGACTGGCAACCAGAGGCATTTTCCAGCCCTCACGCCTCC------TACGGGGC----CCACCCGTGTCACCCGT---------GCAGAGGCGCTCGCCAGGACTTGGGAGGATCTGCGCTCACAACCCCTCACGGCCTCCCTGACATCACCAGCA-GCCCTCGGGCTGCAGAGCAAGCGGGTTTTGTCTT-CCTGCAGACTCCACC-------------------CCCGGAGCACCAGGCACAGAAGCCCAGCGAGGCCGCCTCTGTGCTTGGGGGGGAACAGCCCTGACG------GATTGGTGGTGTCCGCCAGGCGACGGCAGAACACACAGA---GGCACATTTGCCACGTATTTTCCTTGtcacccagggccccacaaatgaccactcaggcaagaaacctccttcaggtctaattgcctggacgagc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1014551 883 - 1291538 ----cCT-----CTTTATTCTTTTattcattcattccaccaatattaactgagcacctactatgtgccagagcccatgctaggactgaggacacaatgatgtcctcagggatatctgtcctgaggggccaggacacctgtccagggacagacaccgtccctgccatcctggaactcccaacctggagagaaaa-----------aacactaagcaaataaacaca-aataactatgtcaggacatgctgtgataaaggctgggatagaaaggcgta-gactgatgcggcaggtgagcgtcagtgcagatggaggagctgggggaggagactctgagaaagtgacactgaactggggccagtagggtgagcagagcgagtcGGGCAC--GCTTATCCAGGCACACAGCTGGTGTTTGCTAAAC--GTGTGGAACAAATGAGTGAC--TAACAAGCC-GGAATCCCAAGTGTGTGCCCTGGGTCCCTCCAGACACAACAACC-CACCCCTGTCAGCCTGAGGGGCC-CCTCCGACTGGCACCCAGGCGAGTTTTCCAGCCCACATGGCTCC------TTCAGTGC----CCACCT-TGTCACCTT----------GCAGAGCCGCTTGCTGGGACTGGAGGGGATCTCCACTCAGAAACCCTCATGGCCTGGCTGAGCCCGCCAGCA-GCCCTCG-GCCggagagcaagtggg-tctgtctcacctgcagactcaatc---gtggtgattga----gcccagagcacccagagcagaacttcggtgagacggcctctgggctcggtgggaaacagccccgatcctgcttgattgccggtgtctgccacgggacagcaaaagacagaga---gccacatt-gccacatcttttccTTGTCACCCAGGGGCCCACAAATGAC--------------ACTTCCTCCAGGTCTAACTACCTGCACCAGC i calJac3.chrUn_GL286409 I 313 C 0 s canFam3.chr9 15773903 847 - 61074082 CCTCCCTATGCATTTTATTCTTTCattcatccatgccacagttgtatactgggcacctccaacatgcga-agcctatgctgggatgggg--------catgagc---------------------------------------aggacacacattgtccctgccaccttggcgctcctgtctccgagggcaac--------aaagccactaaacaaatcagcaccaaacaaatgtatcagtatcagctatgataggggttctgagagaaaagtgcatgg-ttctt--------gagctctgaagcaga-ggaagagtcaaggtgggcatctcagaggaagtga-------ctggtagcagaagggagaggacagtgggtcaggcat--agTT-TCTAGGCAAATAATAGGTGTTTGCTAAATATTTAAGGTACAAACGAGTGGCTGTAGTGAATCAGAAATTGCTATTGTGT-CCCTGTGTCCTTCCAGACACACGTATT----CCCTATCACCTTGGCAGGTC-ACTGCAGCTGGCACCGAGAGGGGGTTTAGGGCAAAAATATTTGCCATACACACAGGACTGATCCACCTATGTCACACCT---------GCAGAGGGGCTTGCCCTGA-TGGTGCAGTT-------------CCCTCACGACTTCC--AACACTGCCATCATGCCCAGTGGGggcatgccaagtgggttttgtcttgcatgccgactccaaatcaatggtaatggctgctgcccagagca-tatgc-tagaacgatgggaaggctctctctggcctctgcaggcaagggccactacc------gactggtgacatctgccatggga-gcaagaatacacagcagtggcacatgtgtcCCAGAGTTTCTGGGCcactcagggtcccatagatgaccacccaggcaagaaatttccttcagatctaattgcctggaaaagc i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I a score=43878.000000 s hg38.chr17_GL383563v3_alt 332071 24 + 375691 attcagtatctggtgccctttcct- s panTro4.chr17 305632 24 + 82630442 attcagtatctggtgccctttcct- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 297691 24 - 81552678 attcagcatctggtacccgttcct- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 223491 23 + 80904711 -atctgcatctgccgccctttcct- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 231928 23 + 80997621 -atccgcatctgccgccctttcct- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 214461 23 + 74645514 -ATCCGCATCTGCCGCCCTTTCCT- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 203284 23 + 75148670 -atccgcatctgttgccctttcct- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1015434 24 - 1291538 ATTCAGCATCTGGGACCCTTTCCT- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15774750 24 - 61074082 acttagt-tttggtatcctttccct i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I e ponAbe2.chr17 188281 21 + 73212453 I a score=502645.000000 s hg38.chr17_GL383563v3_alt 332095 173 + 375691 tatgggccacgtgaaccacgtcactga--tttttttttcctgctttgactgctcattagctcagagctaaatgtgtggttcaaacacagcaaagtatatacagctcgatggcctgaa----tagggggtctaactctccccctgctttcaaccttctagctaatctacatctatgtctt s panTro4.chr17 305656 172 + 82630442 tatgggccacgtgaaccacgtcactga--tttttttttcctgccttgactgctcattagctcagagctaaatgtgtggttcaaacacagcaaagtatatacagctcgatggcctgaa----tagggggtctaactctccccctgctttcaaccttcta-ctaatctacatctatgtctt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 188302 173 + 73212453 tgggggccacgtgaaccacggcactga--tgttcttttcctgccttaactgctcattagctcagagctaaatgtgtggttcaaacacagcaaagtatatacagctcgatggcctgaa----tagggggtctaactctccccctgctttcaaccttctagctaatctacatctatgtctt i ponAbe2.chr17 I 21 C 0 s nomLeu3.chr19 297715 172 - 81552678 tagaggccacacgaaccatgtcactga--t-tttttttcctgccttgactgcccattagctcagagttaaacgtgtggttcgaatacagcaaagtgtatacagctcgatggcctgaa----gagggggtctaactctccccctgctttcaaccttctagctaatctacatctatgtctt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 223514 174 + 80904711 caggggccacctgaaccaggtcactga-tttcttttttcctgcctcgactgctcattagctcagagctaaatgtgtggctcaaatacagcaaactatatccagctcgatggcccgaa----tagggggtctcacgctccccctggcttcaaccttctagataatctacatctatatctt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 231951 174 + 80997621 caggggccacctgaaccaggtcactga-tttcttttttcctgcctcgactgctcattagctcagagctaaatgtgtggctcaaatacagcaaactgtatacagctcgatggcccgaa----tagggggtctcacgctccccctggcttcaaccttctagataatctacatctatgtctt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 214484 175 + 74645514 CAGGGGCCACGTGAACCaggtcactgatttttttttttcctgcctcgaCTGCTCATTAGCTCAGAGCTAAATGTGTGGCTCAAATACAGCAAACTGTATACAGCTCGATGGCCCGAA----TAGGGGGTCTCACGCTCCCCCTGGCTTCAACCTTCTAGATAATCTACATCTATGTCtt i papAnu2.chr16 C 0 I 196 s chlSab2.chr16 203307 173 + 75148670 caggggccacgtgaaccaggtcgctga-ttttttttttcctgcctcgactgctcattagctcagagctaaatgtgtggctcaaatacagcaaactgtatacagctcgatggcccgaa----tagggggtctcacgctccccc-ggcttcaactttctagacaatctacatctatgtctt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1015458 168 - 1291538 CATGGGCCAC-TGGACCGTGTTGCCaa-ctctcatctccctgccttcactgctcattagctcagagctcaatgtgtgcttcaaatacagcaaagtgtacacagctcttcggcctgaagaggtaggtgacctggctctccccc-ggtctcaaccttctagctaatc--------agtttt i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15774774 167 - 61074082 catagaccacatggtttgtggaaataa--tattgctttcctgctttgacctctgatgagttcggagctaaatttgtggttcaaatgtagcagactgtgtatagctctatggcctgag----tacctattctgactctctccctggttttaaccttccagttaatctacatttt------ i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I a score=466183.000000 s hg38.chr17_GL383563v3_alt 332268 164 + 375691 tcctgatcttattttttt-gatctctatttAGTTACATGTCCatatacatacacacatatatgtatagacatatataaacagacatacatacatatataaatataaaatatctacatataggtctggtatgta--atacctactttactttttttctatgaatgtat s panTro4.chr17 305828 160 + 82630442 ttctgatcttatttttat-gatctcta----gttACATGTCCatatacatacacacatatatgtatagacatatataaacagacatacatacatatataaatataaaatatctacatataGGTCTGGTATGTA--ATACCTACTTTACTTTTTTTCTATGAATGTAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 188475 164 + 73212453 tcctgatcttatttttat-gatttctgtttAGTtacatgtacatatacatacacacatatatgtacagacatatataaacagacatacatacgtatataaatataaaacatctacatataGATCTGGTATGTA--ATACCTACTTTATCTTTTTTCTATGAATGTAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 297887 162 - 81552678 tcctgatcttctttttat-gatttctatttAGTACCatgtacatatacatacacacatatatgtatagacatatataaacagacataca----tatataaatataaaatatctacatataggtctggtatgtaatatacctactttaccttttttctatgaatatat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 223688 159 + 80904711 tcctgatcttatttttat-gatttctatttAGTtacaggtacataaacatacacacatatatgtatagacatatgtaaacagacatacacacatatatcaatataaaatatctacgtataGGTCCGGTATGTA--ATACC-----TACCTTTTGTCTATGAACATAT i rheMac3.chr16 C 0 I 41 s macFas5.chr16 232125 164 + 80997621 tcctgatcttatttttat-gatttctatttAGTTACAGGtacataaacatacacacatatatgtatagacatatgtaaacagacatacacacatatatcaatataaaatatctacgtataGGTCCGGTATGTA--ATACCTACTTTACCTTTTGTCTATGAATATAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 214855 164 + 74645514 tcctgatcttatttttat-gatttctatttaGTtacatgtacataaacatacacacatatatatagagacatatgtaaacagacatacacacatgtatcaatataaaatatctacatataGGCCCGGTATGTA--AAACCTACTTTACCTTTTGTCTatgaatatat i papAnu2.chr16 I 196 C 0 s chlSab2.chr16 203480 164 + 75148670 tcctgatcttatttttat-gatttctatttAGTGACAGGTACATAAACATGCACACATATATGTATAGACATATGTAAACAGACATACACACATGTTTCAATAAAAAATATCTACGTATAGGCCCGGTATGTA--ATACCTACTTTACCTTTTGTCTATGAATATAt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1015626 156 - 1291538 tcccaatcttatttttat-aatttctatttAGTtacatgtacacatacatacacacatatatgtatagacata--tagacagacatacctgcat------atataAAATATCTACATATAGGTCCGGTATGGA--ATATCTACTTAACCTTTCTACTATGAATATAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15774941 128 - 61074082 tcccgatcttgtttttatgggtttctatttAGTtacata-------------acacatatacata----------tacacaaacatacatat--------ataGGAAACACCCTCATCTTG-TCTGGCATATA--ATATTTACATTGCTAT-----TATAAATACAT i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I a score=7812.000000 s hg38.chr17_GL383563v3_alt 332432 4 + 375691 --cttt s panTro4.chr17 305988 4 + 82630442 --CTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 188639 4 + 73212453 --CTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 298049 4 - 81552678 --cttt i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 232289 4 + 80997621 --CTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 215019 4 + 74645514 --cttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 203644 4 + 75148670 --cttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1015782 4 - 1291538 --CTTT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15775069 4 - 61074082 ATCT-- i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I e rheMac3.chr16 223847 41 + 80904711 I a score=2212.000000 s hg38.chr17_GL383563v3_alt 332436 17 + 375691 tagatatatagatatat s panTro4.chr17 305992 17 + 82630442 TAGATATATAGATATAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 188643 17 + 73212453 TAGATATATACATATAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 298053 17 - 81552678 tagatatatagatatat i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 232293 1 + 80997621 T---------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 215023 1 + 74645514 t---------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 203648 1 + 75148670 t---------------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1015786 17 - 1291538 TAGACATGTAGATATAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I e canFam3.chr9 15775073 0 - 61074082 C e rheMac3.chr16 223847 41 + 80904711 I a score=798736.000000 s hg38.chr17_GL383563v3_alt 332453 316 + 375691 tatgaatatatCTTACTTT---AAAAAAtagagacagggtctcactatgttgcccaggcttggctgaaactcctggactgaagcgatctgcctgccctgccccc-cacaaagtgctgggattacaggcacgagccaccatgcccagccattaacatgtctttttatatttattTTTTATATTTCttctccc-tttttttttttt------cagagacagggtctcactatgttgcctacgctggtcttgaactcctgggctcaggcaatcctcttgcctcagcttcccaaagtgctgggattacaggcacgagccactgcacccagc s panTro4.chr17 306009 275 + 82630442 TATGAATATATCTTACTTT---AAAAAACagagacagggtctcactatgctgcccaggcttggctcaaactcctggactgaagcgatctgcctgccctgccccc-aacaaagtgctgggattacaggcacgagccaccatgcacagccATTAACATGTCTTTTTATATTTATTTTTTACATTTCTTCTCCC-tttttttttttt-----tcagagacagggtctcactatgttgcctacgct------------------------------------------tcccaaagtgctgggattacaggcacgagccaccgcacccagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 188660 315 + 73212453 TATGAATATATCTTACTTT---AAAAAATAgagacagggtctcactatgttgcccaggcttggctcaaactcctggactcaagcgatctgcctgccctgccccctaacaaagtgctgggattacaggcacgagccaccgtgcccagccattaacatgtctttttatatttattttttatatttattctccc-tttttttttt--------cagagacagggtctcactatgttgcctacgctggtcttgaactcctgggctcaggcaatcctcttgcctcagcttcccaaagtgctgggattacaggcatgagccaccgcacccagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 298070 322 - 81552678 tatgaatatatCTT--TTTAAAAAAAAAtagagacagggtctcaccatgttgcccaggcttggctcaaactcctgaactcaagcgatctgcctgccctgccctc--ccaaagttccgggattacaggcacgagccaccgtgcccagcTATTAACATGTCTTTTTATATTTATTTTTTATATTTCTTCTCCC-ttttttttttttttttttcagagacagggtctcactacgttgcctacgctggtcttgaactcctgggctcaggcaatcctcttgctgcagcttcccaaagtgctgggattacaggcatgagccaccgcacccagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 223888 318 + 80904711 TATGAATATATCTTTTTTA--AAAAAAAtagagacagggtctcactatgttgcccaggcttggctcaaactcctggactcaagcaatccacctgccggggcctc--cccaagcactgggattacaggcatgaaccaccgtgcccagccATTAACATGTCTTTTTATATTTATTTCTTATGtttcttctccc--ttttttttttt---tttcagagacagggtctcactatgttgcctacgctggtcttgaactcctgggctcaggcaatcctcttgcctccgcttcccagagtgctgggattacaggcatgggccaccacacccagc i rheMac3.chr16 I 41 C 0 s macFas5.chr16 232294 304 + 80997621 ----------------TTA--AAAAAAATAgagacagggtctcactatgttgcccaggcttggctcaaactcctggactcaagcaatccacctgccggggcctc--cccaagcactgggattacaggcatgaaccaccgtgcccagccattaacatgtctttttatatttatttcttatgtttcttctcccttttttttttttt---tttcagagacagggtctcactatgttgcctacgctggtcttgaactcctgggctcaggcaatcctcttgcctccacttcccagagtgctgggattacaggcatgggccaccacacccagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 215024 302 + 74645514 -----------------tt--taaaaaatagagacagggtctcactatgttgcccaggcttggctcaaactcctggactcaagcaatccacctgccggGGCCTA--cccaagcactgggattacaggcatgagccaccgtgcccagccattaacatgtctttttatatttatttcttatatttcttctccc-ttttttcttttt---tttcagagacagggtctcactatgttgcctacgctggtcttgaactcctgggctcaggcaatcctcttgcctccgcttcccagagtgctgggattacaggcatgggccaccacacccagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 203649 303 + 75148670 ----------------ttt--aaaaaaatagagacagggtctcactatgttgcccaggcttggctcaaactcctggactcaagcgatccaccagccggggcctc--cccaagcactgggattacaggcacgagccaccgtgcccagccattaacatgtctttttatatttatttcttatatttcttctccc-ttttttcttttt---tttcagagacagggtctcactatgttgcctacgctggtcttgaactcctgggctcaggcaatcctcttgcctccgcttcccagagtgctgggattacaggcatgggccaccacacccagc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1015803 311 - 1291538 TATAAATATGT-----TTT--TAAAAAAtagagacagagtcttactatgttgcccaggtttggctgaaactcctggact-gagtgctctgcctgcc-tggcctc--ccaaagtgctggaatcacgggcgtgagccgccatgcccagccATAAACACATCTTTGTATATTTCTTTTTTATATTTCTTCTCAA-AGACtttttttt----ctcagagacagggtctcaccatattgcctgggctggtcttgaacttatgagctcaagccatcctctcgccccagcttccgaaagtgctgggattatgggcatgaaccaccacacccagc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I e canFam3.chr9 15775073 0 - 61074082 C a score=10764.000000 s hg38.chr17_GL383563v3_alt 332769 3 + 375691 ctt s panTro4.chr17 306284 3 + 82630442 ctt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 188975 3 + 73212453 ctt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 298392 3 - 81552678 cTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 224206 3 + 80904711 cTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 232598 3 + 80997621 cTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 215326 3 + 74645514 ctt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 203952 3 + 75148670 cTT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1016114 3 - 1291538 cTT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15775073 3 - 61074082 CTA i canFam3.chr9 C 0 C 0 e mm10.chr11 75944381 1244 + 122082543 I a score=353297.000000 s hg38.chr17_GL383563v3_alt 332772 135 + 375691 tat--------------------------------------------------atttcttatataaaTAAAATATATAGAGAGATATACATATATTCTTGTAAGCACCCTCAATTCATTTATGGAACAAGATAGAGGAATAAATGGATAGAT----GAATAAATGACAGACAGGAAATAC--CAACGCAGA s panTro4.chr17 306287 135 + 82630442 tat--------------------------------------------------atttcttatataaataaaatataGAGAGAGATATACCTATGTTCTCATAAGCACCCTCAATTCATTTATGGAACAAGATAGAGGAATAAATGGATAGAT----GGATGGATGACAGACAGGAAATAC--TAACGCAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 188978 135 + 73212453 tat--------------------------------------------------atttcttatataaataaaatataGAGAGAGATATACATATATTCttgtaagcaccctcaattcatttatggaacaagatagaggaataaatggatagaT----GAATAGATGACAGACAGGAAATAC--CAACGAAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 298395 112 - 81552678 TCT--------------------------------------------------ATTTCTtatataaataaaatatacacagagatatacatat-----------------------atttatggaacaagatagaggaataaatgaatagat----ggatagatGACAGGCGGGAGATAC--CAAGGAAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 224209 185 + 80904711 TATATTTCTTATATGCATAAAATATAGAGAGAGTTACCACACCCAGCCTTTATATTTCTTATATACGTACAATATAGAGAGAGTTGTAAATATATTCTTGTAAGTACCCTCAATTCTTTTATAGAACAAGATAGAGGAATAAATGAATAGAC----AGAGAGATGACAGACAGGAAATAC--CAGGGAAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 232601 135 + 80997621 TAT--------------------------------------------------ATTTCTTATATACGTACAATATAGAGAGAGTTGTAAATATATTCTTGTAAGTACCCTCAATTCTTTTACAGAACAAGATAGAGGAATAAATGAATAGAC----AGATAGATGACAGACAGGAAATAC--CAGGGAAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 215329 135 + 74645514 tat--------------------------------------------------atttcttatatgcataaaatatagaGAGAGTTACAAATATATTCTTGTAAGTACCCTCAATTCTTTTATAGAACAAGATAGAGGAATAAATGACTAGAC----AGATAGATGACAGACAGGAAATAC--CAGGGAAAA i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 203955 135 + 75148670 CAT--------------------------------------------------ATTTCTTATATGCATAAAATATAGAGAGAGTTATAAATATATTCTTGTAAGTACCCTCAATTCTTGTATAGAACAAGATAGAGGAATAAATGAATAGAC----AGACAGATGACAGACAGGAAATAC--CAGGGAAGA i chlSab2.chr16 C 0 I 10 s calJac3.chrUn_GL286409 1016117 120 - 1291538 CGT--------------------------------------------------ATTTCTTACATAAATAAAAT----AGAGAGATAAACACGTATTCttgtaagcatcctcaattcatttatggaacaagatagagggagaaatgaataaaT----GAA-----------CAGAAAATAC--CAAGGACAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75945625 137 + 122082543 tat--------------------------------------------------atttcttatat--atGACACATGGAGAAACA-AAGCATATATTCTC-TGGGCATTTTCAGTTTTTACATGCAACATGGTGGAGTACTGAGTGGATAGATACGAATATAGATGGATAATGGGAAAAACAGCAAAATAGA i mm10.chr11 I 1244 C 0 s canFam3.chr9 15775076 129 - 61074082 TAT--------------------------------------------------ATGTCTTCTATATTCAAGATATACAGAAAA----AGCTGTGTTCTCATGGGCATCTT-GATTCCTTCATGGAACGAGATGGAGGCCTATGTGCAGAAAT----AGGTGGATGATAGACAGGGAACAC--CAGGAAGA- i canFam3.chr9 C 0 C 0 a score=18719.000000 s hg38.chr17_GL383563v3_alt 332907 8 + 375691 ATGAGACA s panTro4.chr17 306422 8 + 82630442 ATGAGACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189113 8 + 73212453 ATGGGACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 298507 8 - 81552678 ATGAGACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 224394 8 + 80904711 ATAAGACA i rheMac3.chr16 C 0 I 1 s macFas5.chr16 232736 8 + 80997621 ATAAGACA i macFas5.chr16 C 0 I 1 s papAnu2.chr16 215465 8 + 74645514 ATAAGACA i papAnu2.chr16 I 1 I 1 s calJac3.chrUn_GL286409 1016237 8 - 1291538 ATAAGACA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75945762 5 + 122082543 ---AAGCA i mm10.chr11 C 0 I 3 s canFam3.chr9 15775205 6 - 61074082 ATGAGA-- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 204090 10 + 75148670 I a score=1902171.000000 s hg38.chr17_GL383563v3_alt 332915 629 + 375691 A-CTTTGCTCAAAGAATTCAGAATACAGTTAGCTGCATTCTGTCATGAACAGAGTCTGGAGTTAGAGATCAGAAGCCAGGCTCTCAGTCCC----AGCTCGGACCAGCTACATGACTGTGAA-GGGAAACAAGTTACACA--CACACACATCCCCGCAAGTCCTTACCCCGGCCAATCTGAGGCTTTATCAATTATTAAATGTCTATCATCTAATCTGCGCTGC-TCACTTCCCCTGGTGGTAACAG-AAATTACATG-GGAGGTTCCTGACAGC------GCCGTCAACAC-CAGCCTCACGCACGACACTGGCCTCATTATTAGCATTGGAGACAACACTCCAGGCAG---CCCGCGTTCAACGATAAATAATAAGACACCAAGCCGCACGGCCTCCTACTAAATGCTGCAGGAATTCAAAGAGAAAGGAGCCCTCAGAACCCA-CATCTGCATTC--AG------TGTCC---TGCCCC--------------TCTGATGTCTGAGAGCAGCGTCTGACTGAAGGACTTGGATCTCTTGCTTCTCCTAGTAAGA-AGCAAGTCCCAGCCAGGATCAGTCGCAAAAACCCTCAGGACTGGAAAC--GGCTGCCCTGGTATGGAGCAAAGGGCTGGGGCTCTGACAGCCCACAGCA---------------GTCCCCTGACCGCACTGTCCCC s panTro4.chr17 306430 629 + 82630442 A-CTTTGCTGAAAGAATTCAGAATACAGTTAGCTGCACTCTGTCGTGAACagagtatggagttagagatcagaagccaggctctcagtccc----agctcggaccagctacgtgactgtgAA-GGGAAACAAGTTACACA--CACACACTTCCCCGCAAGTCCTTACCCCGGCCAATCTGAGGCTTTATCAATTATTAAATGTCTATCATCTAATCTTCGCTGC-TCACTTCCCCTGGTGGTAACAG-AAATTACATG-GGAGGTTCCTGACAGC------ACCGTCAACAC-CAGCTTCACGCATGACACTGGCCTCATTATTAGCATTGGAGACAACACTCCAGGCAG---CCCGCGTTCAACGATAAATAATAAGACACCAAGCTGCACGGCTTCCTACTAAATGCTGCAGTAATTCAAAGAGAAAGGAGCCCTCAGAACCCA-CATCTGCATGC--AG------TGTCC---TGCCCC--------------TCTGATGTCTGAGAGCAGTGTCTGACTGAAGGACTTGGATCTCTTGCTTCTCCTAGTAAGA-AGCAAGCCCCAGCCAAGATCAGTCGCAAAAACCCTCAGTACTGGAAAC--GGCTGCGCTGGTATGGAGCGAAGGGCTGAGGCTCTGACAGCCCCCAGCG---------------GTCCCCTGACCGCACTGTCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189121 625 + 73212453 ACCTTTGCTGAAAGAATTCAGAATATAGTTAGCTGCACTCTGTCGTGAACagagtacggagttagagatcagaagccaggctctcagtccc----agctcggaccagctacgtgactgtgAA-GGGAAACAAGTTACACA--CACACA--TCCCCGCAAGTCCTTA-CCCGGCCAGTCTGAGGCTTTATCAACTATTAAATACCTATCATCTAATCTGCACTGC-TCACTTCCCCCAGTGGTAACAC-AAATTACATG-GGAGGTTCCTGACTGC------GCCGTCAACAC-CAGCTTCGTGCACGACATTGGCTTCGTTATTAGCATTGGAGACAACACTCCAGGGAG---CCCGCGTTCGACCATAAATAATAAGACACGAAGCCACATGGCCTCCTACTAAATGCTGCAGGAATTCAAAGAGAAAGGAGCCCTCAGAACCCA-CATCTGCGTTCAGAG------TGTCC---TGCCCC--------------TCTGATGTCTGAGAGCAGCGTCTGACTGAAGGACTTCGATCCCTTGCTTCTCCTAGTAAGA-AGCAAGCCCCAGCCAAGATCAGTCGC---AACCCTCAGGACTGGAAAC--GGCTGCCCTGGTATGGAGCAAAGGGCTGGGGCTCTGACAGCCCCCGGCG---------------GTCCCCTGACCACACTGT-CCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 298515 623 - 81552678 AGCTTTGCTGAAAGAATTCAGAATATAGTTAGCTGCACTC--TCGTGAACAGGGTATGGAGTCAGAGATCAGAAGCCAGGCTCTCAGTCCC----AGCTCAGACCAGCTACGTGGCTGTGAA-GGAAAACAAGTCACACA--CACACA--TCCCCGCAAGTCCCTACCCCGGCCAATCTGAGGCTTTATCAGCTATTAAATGTCTGTCATCTAGTCCGCGCTGC-TCACTTCCCCTGGCGGTAACAG-AATTTACACG-GGAGGTTCCTGACTGC------GCCGTCAACGC-CAGCTTCACGCACGACACTGGCGTCATTATTAGTATTGGAGACGACATTCCAGGCAG---CCAGCATTCAACCATAAATAATAAGACACCAAGCCGCATGGCCTCCTACTAAACGCTGCAGGAATTC--AGAGAAAGGAGCCCTCAGGACCCA-CATCTGCATTCAGAG------TGTCC---TGCCCC--------------TCTGATGCCTGAGAGCGGCATCTGACTGAAGGACTTCCATCCCTTGCTTCTCCTAGTAAGA-AGCAAGCCCCAGCCGAGATCAGTCGC---AACCCTCAGGACTGGAAAC--GGCTGCCCTGGTATGGAGCAAAGGGCTGGGGCTCTGACAGACCCCGGCG---------------GTCCCCTGACCACACTGTCCCC i nomLeu3.chr19 C 0 M 788 s rheMac3.chr16 224403 625 + 80904711 -CCTTTGCTGAGAGAATTCAGAATACAATTAGCTGCACCCTGTCGTGAACAGAGTATGGAATTAGAGATCAGAAGCCAGACTCGCAGTCCC----AGCTCGCACCAGCGACGTGACTGTGAA-GGGAAACAAGTTAAACA--CACACA--GCCCCGCAAGTCCTTACCCCGGCCAGTCTGAGGTTTTATCAACTCTTACATGTCTATCACCTAATCTGCGCTGC-TCACTTCCCCTGGTGGTAACAG-AAATTACACG-GGAGGTTCCTGACTGT------GCCGTCAACAC-CGGCTTCATGCAGGACGCTGGCGTCATTATTAGTATTGGAGACGACACTCCAGGCAG---CCCGCGTTCGACCGTAAACAATAAGACACCAAACGGCACGGCCCCCTACTAAATGCTGCGGGAATTCAAAGAGAGAGGAGCCCTCAGAACCCA-CATCTGCATTCAGAG------TGTCC---TGCCCC--------------TCTGACGTCTGAGAGCAGCGTCTGCCTGAAGGACTTCCGTCCCGTGCTTCTCCTAGCACGACAGCAGGCCCCAGCCAGGATCAGT-GC---GACCCTCAGGACTGGAAAC--GGCTGCCCTGGTATGGAGCAAAGGGTTGGGGCTCTGACAGCCCCC-GCG---------------GTCCCCTGACCACACTGTCCTC i rheMac3.chr16 I 1 C 0 s macFas5.chr16 232745 625 + 80997621 -CCTTTGCTGAGAGAATTCAGAATACAGTTAGCTGCACCCTGTCGTGAACAGAGTATGGAATTAGAGATCAGAAGCCAGACTCGCAGTCCC----AGCTCGGACCAGCGACGTGACTGTGAA-GGGAAACAAGTTAAACA--CACACA--GCCCCGCAAGTCCTTACCCCGGCCAGTCTGAGGTTTTATCAACTCTTACATGTCTATCACCTAATCTGCGCTGC-TCACTTCCCCTGGTGGTAACAG-AAATTACACG-GGAGGTTCCTGACTGT------GCCGTCAACAC-CGGCTTCATGCAGGACGCTGGCGTCATTATTAGTATTGGAGACGACACTCCAGGCAG---CCCGCGTTCGACCGTAAACAATAAGACACCAAACGGCACGGCCTCCTACTAAATGCTGCGGGAATTCAAAGAGAGAGGAGCCCTCAGAACCCA-CATCTGCATTCAGAG------TGTCC---TGCCCC--------------TCTGACGTCTGAGAGCAGCGTCTGCCTGAAGGACTTCCGTCCCGTGCTTCTCCTAGCACGACAGCAAGCCCCAGCCAGAATCAGT-GC---GACCCTCAGGACTGGAAAC--GGCTGCCCTGGTATGGAGCAAAGGGCTGGGGCTCTGACAGCCCCC-GCG---------------GTCCCCTGACCACACTGTCCTC i macFas5.chr16 I 1 C 0 s papAnu2.chr16 215474 625 + 74645514 -CCTTTGCTGAGAGAATTCAGAATACAGTTAGCTGCACTCTGTCATGAACAGAGCATGGAAATAGAGATCAGAAGCCGGACTCGCAGTCCC----AGCACGGACCAGCGACGTGACTGTGAA-GGGAAACAAGTTAAACA--CACACA--GCCCCGCAAGTCCTTACCCCAGCCAGTCTGAGGTTTTATCAACTCTTACATGTCTATCATCTAATCTGCGCTGC-TCACTTCCCCTGGTGGTAACAG-AAATTACACG-GGAGGTTCCTGACTGT------GCCGTCAACAC-CGGCTTCATGCAGGACGCTGGCGTCATTATTAGTATTAGAGACGACACTCCAGGCAG---CCCACGTTCGACCATAAACAATAAGACACCAAATGGCACGGCCTCCTACTAAATGCTGCGGGAATTCAAAGAGAGAGGAGCCCTCAGAACCCA-CATCTGCATTCAGAG------TGTCC---TGCCCC--------------TCTGACGTCTGAGAGCAGCGTCTGCCTGAAGGACTTCGATCCCCTGCATCTCTTAGCAAGACAGCAAGTCCCAGTCAGGATCAGT-GC---GACCCTCAGGACTGGAAAC--GGCTGCCCTGGTATGGAGCAAAGGGCTGGGGCTCTGACAGCCCTC-GCA---------------GTCCCCAGACCACACTGTCCTC i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 204100 622 + 75148670 -ACTTTGCTGAGAGAATTCAGAATACAGTTAGCTGCACTCTGTCGTGAACAGAGTATGGAATTAGAGATCAGAAGCCAGACTCTCAGTCCC----AGCTCGGACCAGCGACGTGACTGTGAA-GGGAAACAAGTTAAACA--CACACA--TCCCCGCAAGTCCTTACCCCGGCCAGTCTGAGGTTTTATCAACTCTTACATGTCTATCATCTAATCTGCGCTGC-TCACTTCCCC-GGTGGTCACAG-AAATTACACG-GGAGGTTCCCGACTGT------GC---CAACAC-CGGCTTCATGCAGGACGCTGGCGTCATTATTAGTATTGGAGACGACGCTCCAGGCAG---CCCGCGTTCGACCATAAACAATAAGACACCAAACGGCACGGCCTCCTGCTAAATGCTGCAGGAATTCAAAGAGAAAGGAGCCCTCAGAACCCATTATCTGCATTCAGAG------TGTCC---TGCCC----------------CTGATGTTTGAGAGCAGCGTCTGACTGAAGGACTTCGATCCCCTGCTTCTCCTAACACGACAGCAAGCCCCAGCCAGGATCAGTGGT---GACCCTCAGGACTGGAAAC--GGCTGCCCTGGTATGGAGCAAAGGGCTGGGGCTCTGACAGCCCCCGGCG---------------GTCCCCTGACCACACTGTCCTC i chlSab2.chr16 I 10 C 0 s calJac3.chrUn_GL286409 1016245 629 - 1291538 ATCTTTGCGGAAAGAATTCAGAATACAGTTAGTTGCACTCTGCCGTGAGCAGCGTATAGAATTAGAGATCAGAAG-CAGACT--CAGTCCC----AACTCGGCCCAGCTACCTGACTGTGAA-GAGAAAAACGTTGCACA--CACACA--CACCC----CTCCTTAACCCAGCCAATCTGAGGCTTTATCAGCCATTAAAAGCCTATCATCTAATCTGTACTGT-TTACTTCACCAGGTGGTAACAG-AAATTCCATG-GGAGGTTCGTGGCTGT------GCCATCAACAC-CAGCTTCAAGCGCGAC-CTGGCCTCATTATTAGTATTGCAGACGACATTCTAGGAAG---CCAGCATTCGGCCATGCATAAGGAGACACCAAGCCTCATGGCCTCCTTCTAAACGCCACAGGAATTCAAAGAGAAAGACGCCCTCAGAA-CCA-CATCTGCATTCAGAG------TGCCC---TGCCCC--------------TCTG----CTGAGAGCAGCGTCTGGCTGAAGCGCTCCAAACCCTGGCTTCTCCCAGCAAGAGGGCAAGCCCTAGCCAAGATCCATGGC---AATCCTCAGGACTGGAAAC---GCCGCCAGGGTACGGAGCAAAGGGCTGCAGCTCTGACCACCCCCAGCGTCCCCTGACCACGTCGTCCCCTGACCCCACTGTCCCC i calJac3.chrUn_GL286409 C 0 I 48 s mm10.chr11 75945770 577 + 122082543 -TTTTTCCTTGAAAATGTCAGAGTACAGTTGG----GCTCAGGGAAGAACAGGGTAC-----CAGTGGTCAGATGCCAGGCT---AGTCATGAGGAGCTTG--TCAGCAACTCTACTGGGAGCAGGAAACGACCCACATAGCCACCCC--TCCCCG-----------CCCAGGCACTCTGAGGTTTTATCAAC---------CCTCTAACACAGCCTGCCCCCA-TCCCTTCCACT-----CAGCAGCAAATTAAATGCAGAGGTTGGTGACTGC------GA-GTCTGCAC-CAGCTCCCTGCACAGGGCTGACA-----ATTAGTATTGGAAGCAACATTCTAGAAAGACAACAGCACCGGGCCATGAATAATGAGACAGCAAACTATGCGGACTCCTTATAGATGCTGACAGAATTCTAAGTGAAGAGAGCCCCCA--ACCTG-CGTCTGCATTCAGAC------TGGCCCTGTCCCCC--------------TCTGATGTCTGAAAGCAGCCACAGACTGGAGAACTCCTGTGCCTTGCTTCTCCCAGCAAGAGAGCAAACCCCAGCTAAGATCAATCAC---ACTGCTCAGGACCAGAGACTCGGC--CCCCAGCATG-----ATGGGCTCG------------TCCTGGCA---------------GCCTCCTGACCCCG-TGTACCC i mm10.chr11 I 3 C 0 s canFam3.chr9 15775211 601 - 61074082 -------------GCACTCAGATCGCCACCA----TGTTCTGCTGTGAATGGAGCCTGGGATTAGAGAGGAGTGGCCAGGCTTCTCGGCCC----AGCTCGGCGCAGCAGTGATGGAAGGAC-GGGAGAAAAACTATTCT--CAC-----ACCCCG-----ACCCACGCCAGGCAACCTGAGG--TTGCCAACTCCTGAAAGCATATAAAGCAATCTGTCCTACTTTACTTTGTCTTCTTCTAACAG-AAATTAAATGCAGAGGTGCCTGACTGCTAATCAGTGGTAAGCCTGCAGCTT-----ATGCTACCCGCATCATTATGACGCCTAGAGAGAATATTATAGGCAA---CCAGCACCCAGTCATAAACATGAAAACGCCACACCGCATGGCTTCCT-TTAAATGCTGCAGGAATTCAAAGAGAGTGGAGCCTTCGGAGCCAA-CATCTGCATGCAACGTCCTTCTGTTC---CCCCCCCACACACACACACACCCCATGTCTGGGAGCCGTGTCTGACTGAAGGACTTCAAGTCCCTGCTTCTCACAGCCACAGAAAAAGTGCCATCTGGG-CAGATCAC---GCTCCTTAGGGCCGGAAAT--GGCAGCCACCATCTT--------------------------CCCCCGCACCAA-----------GGCCCCACGTGGCTCTGCCCCC i canFam3.chr9 C 0 C 0 a score=195163.000000 s hg38.chr17_GL383563v3_alt 333544 70 + 375691 TGCAGAAAGGCCAGCACAGCACGCATCACCCGTGGGCCAGGTGAAA---GAGGACAGGCCAAGGCTGGAAACC s panTro4.chr17 307059 70 + 82630442 TGCAGAAAGGCCAGCACAGCACACATCACCCGTGGGCCAGGTGAAA---GAGGACAGGCCAAGGCTGGAAACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189746 70 + 73212453 TGCAGAAAGGCCAGCACAGCACACATCACCCGTGGGCCAGGTAAAA---GAGGACAGGCCAAGGCTGGAAACC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 225028 70 + 80904711 TGCAGAAAGGCCAGCCCAGCACACATCGCCCGTGGGCCAGGTGAAA---GAGGACAGGCCAAGGCTGGAAACC i rheMac3.chr16 C 0 I 16 s macFas5.chr16 233370 70 + 80997621 TGCAGAAAGGCCAGCACAGCACACATCGCCCGTGGGCCAGGTGAAA---GAGGACAGGCCAAGGCTGGAAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216099 70 + 74645514 TGCAGAAAGGCCAGCACAGCACACATCGCCCGTGGGCCAGGTGAAA---GAGGACAGGCCAAGGCTGGAAACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204722 69 + 75148670 TGCAGAAAGGCCAGCACAGCACACATCACCCGTGGGCCAGGTGAAA---GAGGACAGGCCACAGCTGGAAAC- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1016922 69 - 1291538 TGCAGAAAGGCCAGCACAGCACACGTGATCTGTGGGCCAGGTGAAA---GAGGGCA-GCTGAGGCTGGAAACT i calJac3.chrUn_GL286409 I 48 C 0 s mm10.chr11 75946347 72 + 122082543 -ACAGAAAGAGTGCCACAGTGTGTGGCCCCTGTGGGCCAGCTGAAAGAGGAGGATGAGCCAGGGCAGGAAGCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15775812 49 - 61074082 -------------------CATGCATCACCTTCAGGCCAGGTAAAG-----AGCCTGAGCAAGGCTGAAAACC i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 299138 788 - 81552678 M a score=845.000000 s hg38.chr17_GL383563v3_alt 333614 1 + 375691 G s panTro4.chr17 307129 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189816 1 + 73212453 G i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 1016991 1 - 1291538 G i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75946419 1 + 122082543 G i mm10.chr11 C 0 C 0 s canFam3.chr9 15775861 1 - 61074082 A i canFam3.chr9 C 0 C 0 e chlSab2.chr16 204791 0 + 75148670 C e papAnu2.chr16 216169 0 + 74645514 C e rheMac3.chr16 225098 16 + 80904711 I e macFas5.chr16 233440 0 + 80997621 C e nomLeu3.chr19 299138 788 - 81552678 M a score=12335.000000 s hg38.chr17_GL383563v3_alt 333615 10 + 375691 TGGGGCGCTG s panTro4.chr17 307130 10 + 82630442 TGGGACGCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189817 10 + 73212453 TGGGGCGCTG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 233440 10 + 80997621 TGGGGCCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216169 10 + 74645514 TGGGGCCCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204791 3 + 75148670 -------CTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1016992 10 - 1291538 AAGGGCCCTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75946420 10 + 122082543 CAGGCCAGTG i mm10.chr11 C 0 C 0 s canFam3.chr9 15775862 10 - 61074082 CTGGGTGGTG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 225098 16 + 80904711 I e nomLeu3.chr19 299138 788 - 81552678 M a score=11158.000000 s hg38.chr17_GL383563v3_alt 333625 6 + 375691 -GGGCAG s panTro4.chr17 307140 6 + 82630442 -GGGCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189827 6 + 73212453 -GGGCAG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 233450 6 + 80997621 -GGGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216179 6 + 74645514 -GGGCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204794 6 + 75148670 -GGGCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1017002 6 - 1291538 -GGGTGA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75946430 7 + 122082543 CCAGCAG i mm10.chr11 C 0 C 0 e canFam3.chr9 15775872 0 - 61074082 C e rheMac3.chr16 225098 16 + 80904711 I e nomLeu3.chr19 299138 788 - 81552678 M a score=44472.000000 s hg38.chr17_GL383563v3_alt 333631 36 + 375691 GTGACCCCTCCGTGTGCCTCCCACATGACCTCACAG s panTro4.chr17 307146 36 + 82630442 GTGACCCCTGCGTGTTCCTCCCACATGACCACATAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189833 36 + 73212453 GTGACCCCTGCGTGTTCCTCCCACCAGACCTCACAG i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 233456 36 + 80997621 CTGACCCCTGCGTGTGCCTCCCACATGACCTCCCGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216185 36 + 74645514 CTGACCCCTGCGTGTGCCTCCCACATGGCCTCGCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204800 36 + 75148670 CTGACCCCTGCGTGTGCCTCCCGCGTGACCTCCCAG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75946437 34 + 122082543 GTGCCCCTCACACA-GCCTCCCACA-GACTTCACAG i mm10.chr11 C 0 I 8 e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e rheMac3.chr16 225098 16 + 80904711 I e nomLeu3.chr19 299138 788 - 81552678 M a score=2865.000000 s hg38.chr17_GL383563v3_alt 333667 2 + 375691 AC s panTro4.chr17 307182 2 + 82630442 AC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 189869 2 + 73212453 AC i ponAbe2.chr17 C 0 I 5669 s macFas5.chr16 233492 2 + 80997621 AC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216221 2 + 74645514 AC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204836 2 + 75148670 AC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e rheMac3.chr16 225098 16 + 80904711 I e nomLeu3.chr19 299138 788 - 81552678 M a score=13180.000000 s hg38.chr17_GL383563v3_alt 333669 12 + 375691 CTGACCCCTGCG s panTro4.chr17 307184 12 + 82630442 CTGACCCCTGGG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225114 12 + 80904711 CTGACCCCTGCG i rheMac3.chr16 I 16 C 0 s macFas5.chr16 233494 12 + 80997621 CTCACCCCTGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216223 12 + 74645514 CTCACCCCTGCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204838 12 + 75148670 CCCACTCCTGCG i chlSab2.chr16 C 0 I 51 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=69531.000000 s hg38.chr17_GL383563v3_alt 333681 64 + 375691 TGTTCCTCCCACATGACCTCACAGACCTGACCCCTCCGTGCGCCTCCCACATGACCTCACAGAC s panTro4.chr17 307196 64 + 82630442 TGATCCTCCCACATGACCTAGCAGACCTGACCCCTGCCTGTGCCTCCCACGTGACCTAGCAGAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225126 64 + 80904711 TGTGCCTCCCACATGGCCTCCCAGACCTCACCCCTGCGTGTGCCTCCCGCATGGCCTCCCGGAC i rheMac3.chr16 C 0 T 76 s macFas5.chr16 233506 64 + 80997621 TGTGCCTCCCGCACGACCTCCCGGACCTCACCCCTGCGTGTGCCTCCCGCACGGCCTCACGGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216235 64 + 74645514 TGTGCCTCCCACATGGCCTCCCAGACCTCACCCCTGCGTGTGCCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 C 0 T 114 s chlSab2.chr16 204901 64 + 75148670 TGTGCCTCCTGCGTGACCTCACAGACCTCACCCCTGTGTGTGCCTCCCGCATGGCCTCCCAGAC i chlSab2.chr16 I 51 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=10330.000000 s hg38.chr17_GL383563v3_alt 333745 16 + 375691 CTGACCCCAACGTGTT s panTro4.chr17 307260 16 + 82630442 CTGACCCCTGCGTGTT i panTro4.chr17 C 0 C 0 s macFas5.chr16 233570 16 + 80997621 CGCACCCCTgcgtgtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216185 16 + 74645514 CTGACCCCTGCGTGTG i papAnu2.chr16 T 114 C 0 s chlSab2.chr16 204965 16 + 75148670 CCCACCCCTGCGTGTG i chlSab2.chr16 C 0 T 124 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=10267.000000 s hg38.chr17_GL383563v3_alt 333761 22 + 375691 CCTCCCACATGACCTCACAGAC s panTro4.chr17 307276 22 + 82630442 CCTCCCACATGACCTCACAGAC i panTro4.chr17 C 0 C 0 s macFas5.chr16 233586 22 + 80997621 cctcccgcgtggcctcccggac i macFas5.chr16 C 0 T 152 s papAnu2.chr16 216201 22 + 74645514 CCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 C 0 T 38 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204981 124 + 75148670 T e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=19035.000000 s hg38.chr17_GL383563v3_alt 333783 38 + 375691 CTGACCCCTGCGTGCGCCTCCCACATGACCTCACAGAC s panTro4.chr17 307298 38 + 82630442 CTGACCCCTGCCTGTGCCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s macFas5.chr16 233456 38 + 80997621 CTGACCCCTGCGTGTGCCTCCCACATGACCTCCCGGAC i macFas5.chr16 T 152 T 38 s papAnu2.chr16 216185 38 + 74645514 CTGACCCCTGCGTGTGCCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 T 38 T 38 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204981 124 + 75148670 T e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=17724.000000 s hg38.chr17_GL383563v3_alt 333821 38 + 375691 CTGACCCCAACGTGTTCCTCCCACATGACCTCACAGAC s panTro4.chr17 307336 38 + 82630442 CTGACCCCTGCCTGTGCCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s macFas5.chr16 233456 38 + 80997621 CTGACCCCTGCGTGTGCCTCCCACATGACCTCCCGGAC i macFas5.chr16 T 38 T 38 s papAnu2.chr16 216185 38 + 74645514 CTGACCCCTGCGTGTGCCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 T 38 T 38 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204981 124 + 75148670 T e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=3492.000000 s hg38.chr17_GL383563v3_alt 333859 6 + 375691 CTGACC s panTro4.chr17 307374 6 + 82630442 CTGACC i panTro4.chr17 C 0 C 0 s macFas5.chr16 233456 6 + 80997621 CTGACC i macFas5.chr16 T 38 C 0 s papAnu2.chr16 216185 6 + 74645514 CTGACC i papAnu2.chr16 T 38 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204981 124 + 75148670 T e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=24252.000000 s hg38.chr17_GL383563v3_alt 333865 32 + 375691 CCTGCGTGTTCCTCCCACATGACCTCACAGAC s panTro4.chr17 307380 32 + 82630442 CCTGCCTGTGCCTCCCACGTGACCTCAAAGAC i panTro4.chr17 C 0 C 0 s macFas5.chr16 233462 32 + 80997621 CCTGCGTGTGCCTCCCACATGACCTCCCGGAC i macFas5.chr16 C 0 T 38 s papAnu2.chr16 216191 32 + 74645514 CCTGCGTGTGCCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204857 32 + 75148670 CCTGCATGTGCCTCCCGCGTGACCTCCCAGAC i chlSab2.chr16 T 124 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=10732.000000 s hg38.chr17_GL383563v3_alt 333897 16 + 375691 CTGACCCCAGCGTGTT s panTro4.chr17 307412 16 + 82630442 CTGACCCCTGACTGTG i panTro4.chr17 C 0 C 0 s macFas5.chr16 233456 16 + 80997621 CTGACCCCTGCGTGTG i macFas5.chr16 T 38 C 0 s papAnu2.chr16 216223 16 + 74645514 CTCACCCCTGCGTGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204889 16 + 75148670 CTCACCCCTGCGTGTG i chlSab2.chr16 C 0 T 48 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=10805.000000 s hg38.chr17_GL383563v3_alt 333913 22 + 375691 CCTCCCACATGACCTCACAGAC s panTro4.chr17 307428 22 + 82630442 CCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s macFas5.chr16 233472 22 + 80997621 CCTCCCACATGACCTCCCGGAC i macFas5.chr16 C 0 T 38 s papAnu2.chr16 216239 22 + 74645514 CCTCCCACATGGCCTCCCAGAC i papAnu2.chr16 C 0 T 76 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204905 48 + 75148670 T e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=20076.000000 s hg38.chr17_GL383563v3_alt 333935 38 + 375691 CTGACCCCTGCGTGTGCCTCCCACATGACCTCACAGAC s panTro4.chr17 307450 38 + 82630442 CTGACCCCTGCGTGTGCCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s macFas5.chr16 233456 38 + 80997621 CTGACCCCTGCGTGTGCCTCCCACATGACCTCCCGGAC i macFas5.chr16 T 38 T 38 s papAnu2.chr16 216185 38 + 74645514 CTGACCCCTGCGTGTGCCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 T 76 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204905 48 + 75148670 T e rheMac3.chr16 225190 76 + 80904711 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=32938.000000 s hg38.chr17_GL383563v3_alt 333973 38 + 375691 CTGACCCCTGCGTGTGCCTCCCACATGACCTCACAGAC s panTro4.chr17 307488 38 + 82630442 CTGACCCCTGCGTGTGCCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225114 38 + 80904711 CTGACCCCTGCGTGTGCCTCCCACATGGCCTCCCAGAC i rheMac3.chr16 T 76 C 0 s macFas5.chr16 233456 38 + 80997621 CTGACCCCTGCGTGTGCCTCCCACATGACCTCCCGGAC i macFas5.chr16 T 38 T 38 s papAnu2.chr16 216223 38 + 74645514 CTCACCCCTGCGTGTGCCTCCCACATGGCCTCCCAGAC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204905 48 + 75148670 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=30581.000000 s hg38.chr17_GL383563v3_alt 334011 38 + 375691 CTGACCCCTGCGTGTGCCTCCCACATGACCTCACAGAC s panTro4.chr17 307526 38 + 82630442 CTGACCCCTGCCTGTGCCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225152 38 + 80904711 CTCACCCCTGCGTGTGCCTCCCGCATGGCCTCCCGGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233456 38 + 80997621 CTGACCCCTGCGTGTGCCTCCCACATGACCTCCCGGAC i macFas5.chr16 T 38 C 0 s papAnu2.chr16 216261 38 + 74645514 CTCACCCCTGCGTGTGCCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 C 0 T 114 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204905 48 + 75148670 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=27951.000000 s hg38.chr17_GL383563v3_alt 334049 38 + 375691 CTGACCCCTGCGTGTTCCTCCCACATGACCTCACAGAC s panTro4.chr17 307564 38 + 82630442 CTGACCCCTGCCTGTGCCTCCCACGTGACCTCAAAGAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225190 38 + 80904711 CTCACCCCTGCGTGTGCCTCCCACATCACCTCCCAGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233494 38 + 80997621 CTCACCCCTGCGTGTGCCTCCCGCACGACCTCCCGGAC i macFas5.chr16 C 0 T 76 s papAnu2.chr16 216185 38 + 74645514 CTGACCCCTGCGTGTGCCTCCCACATGGCCTCGCAGAC i papAnu2.chr16 T 114 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204905 48 + 75148670 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=3946.000000 s hg38.chr17_GL383563v3_alt 334087 6 + 375691 CTGACC s panTro4.chr17 307602 6 + 82630442 CTGACC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225228 6 + 80904711 CTCATC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233456 6 + 80997621 CTGACC i macFas5.chr16 T 76 C 0 s papAnu2.chr16 216223 6 + 74645514 CTCACC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e chlSab2.chr16 204905 48 + 75148670 T e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=38833.000000 s hg38.chr17_GL383563v3_alt 334093 32 + 375691 CCTGCGTGTGCCTCCCACATGACCTCACAGAC s panTro4.chr17 307608 32 + 82630442 CCTGCGTGTGCCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225234 32 + 80904711 CCTGCATGCGCCTCCCACATGACTTCACAGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233462 32 + 80997621 CCTGCGTGTGCCTCCCACATGACCTCCCGGAC i macFas5.chr16 C 0 T 38 s papAnu2.chr16 216229 32 + 74645514 CCTGCGTGTGCCTCCCACATGGCCTCCCAGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204857 32 + 75148670 CCTGCATGTGCCTCCCGCGTGACCTCCCAGAC i chlSab2.chr16 T 48 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=6705.000000 s hg38.chr17_GL383563v3_alt 334125 6 + 375691 CTGACC s panTro4.chr17 307640 6 + 82630442 CTGACC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225266 6 + 80904711 CTCACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233456 6 + 80997621 CTGACC i macFas5.chr16 T 38 C 0 s papAnu2.chr16 216261 6 + 74645514 CTCACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204889 6 + 75148670 CTCACC i chlSab2.chr16 C 0 T 38 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=45518.000000 s hg38.chr17_GL383563v3_alt 334131 38 + 375691 CCTGCGTGTGCCTCCCACATGACCTCACAGACCTGACC s panTro4.chr17 307646 38 + 82630442 CCTGCGTGTGCCTCCCACGTGACCTCAAAGACCTGACC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225272 38 + 80904711 CCTGCGTGTGCCTCCCGCGTGGCCTCCCGGACCTCACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233462 38 + 80997621 CCTGCGTGTGCCTCCCACATGACCTCCCGGACCTCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216267 38 + 74645514 CCTGCGTGTGCCTCCCACATGGCCTCGCAGACCTCACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204857 38 + 75148670 CCTGCATGTGCCTCCCGCGTGACCTCCCAGACCTCACC i chlSab2.chr16 T 38 T 38 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=45400.000000 s hg38.chr17_GL383563v3_alt 334169 38 + 375691 CCTGCGTGTGCCTCCCACATGACCTCACAGACCTGACC s panTro4.chr17 307684 38 + 82630442 CCTGCCTGTGCCTCCCACGTGACCTCACAGACCTGACC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225310 38 + 80904711 CCTGCGTGTGCCTCCCGCGTGGCCTCCCGGACCTCACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233500 38 + 80997621 CCTGCGTGTGCCTCCCGCACGACCTCCCGGACCTCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216305 38 + 74645514 CCTGCGTGTGCCTCCCACATGGCCTCCCAGACCTCACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204857 38 + 75148670 CCTGCATGTGCCTCCCGCGTGACCTCCCAGACCTCACC i chlSab2.chr16 T 38 T 38 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=120031.000000 s hg38.chr17_GL383563v3_alt 334207 108 + 375691 CCTGCGTGTGCCTCCCACATGACCTCACAGACCTGACCCCTGCGTGTGCCTCCCACATGACCTCACAGACCTGACCCCTGCGTGTGCCTCCCACATGACCTCACAGAC s panTro4.chr17 307722 108 + 82630442 CCTGCGTGTTCCTCCCACGTGACCTCACAGACCTGACCCCTGCCTGTGCCTCCCACGTCACCTCAAAGACCTGACCCCTGCGTGTGCCTCCCACGTGACCTCACAGAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225348 108 + 80904711 CCTGCGTGTGCCTCCCGCACGGCCTCACGGACCTCACCCCTgcgtgtgcctcccgcgtggcctcccggacctcacccctgcgtgtgcctcccgcgtggcctcccggac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233538 108 + 80997621 CCTGCGTGTGCCTCCCGCACGGCCTCACGGACCGCACCCCTgcgtgtgcctcccgcgtggcctcccggaccgcacccctgcatgtgcctcccgcgtggcctcccggac i macFas5.chr16 C 0 T 190 s papAnu2.chr16 216343 108 + 74645514 CCCGCATGTGCCTCCCGCATCACCTCACAGGCCTCACCCCTGCGTGTGCCTCCCACACAGCCTCCCAGACTGCACCCCTGCGTGTGCCTCCCGCATGACTTCACAGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204857 108 + 75148670 CCTGCATGTGCCTCCCGCGTGACCTCCCAGACCTCACCCCTGCGTGTGCCTCCTGCGTGACCTCACAGACCTCACCCCTGTGTGTGCCTCCCGCATGGCCTCCCAGAC i chlSab2.chr16 T 38 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=99754.000000 s hg38.chr17_GL383563v3_alt 334315 108 + 375691 CTGACCCCTGCGTGTGCCTCCCACATGACCTCGCAGACCTGACCCCTGCGTGTGCCTCCCACATGACCTCACAGACCTGACCCCTGCGTGTGCCTCCCACATGACCTC s panTro4.chr17 307830 108 + 82630442 CTGACCCCAGCGTGTTCCTCTCACATGACCTCACAGACCTGACCCCTGCCTGTGCCTTCCACGTGACCTCAAAGACCTGACCCCTGCCTGTGCCTCCCACGTGACCTC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225456 70 + 80904711 ctcacccctgcgtgtgcctcccgcgtggcctcccgGACCTCACCCCTGCATGTGCCTCCCGCA--------------------------------------CGGCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233456 108 + 80997621 CTGACCCCTGCGTGTGCCTCCCACATGACCTCCCGGACCTCACCCCTGCGTGTGCCTCCCGCACGACCTCCCGGACCTCACCCCTGCGTGTGCCTCCCGCACGGCCTC i macFas5.chr16 T 190 C 0 s papAnu2.chr16 216451 108 + 74645514 CCGACCCTTGCGTGTGCCTCCCGCACGGCCTCCCAGACCGCACCCCTGCGTGTGCCTCCTGCATGGCCTCCCAAACCTCACCCCTGCGTGTGCCTCCCGCATCACCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204965 108 + 75148670 CCCACCCCTGCGTGTGCCTCCCGCATGGCCTCCCAGACCTCACCCCTGCGTGTGCCTCCCGCATGGCCTCCCAGACCTCACCCCTGTGTGTGCCTCCCGCATGACCTC i chlSab2.chr16 C 0 T 114 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=120897.000000 s hg38.chr17_GL383563v3_alt 334423 114 + 375691 ACAGACCTGACCCCTGCGTGTTCCTCCCACATGACCTCGCAGACCTGACCCCTGCGTGTGCCTCCCACATGACCTCGCAGACCTGACCCCTGCGTGTGCCTCCCACATGACCT-C s panTro4.chr17 307938 115 + 82630442 ACATACCTGACCCCTGCCGGTTCCTCCCACATGACCGCACAGATCTGACCCCTGCCTGTGCCTCCCACGTGACCTCCAAAAACTGACCCCTGCGTGTGCCTTCTACGAGACCTCC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225526 114 + 80904711 ACAGACCGCACCCCTgcgtgtgcctcccgcgtggcctcccggacctcacccctgcgtgtgcctcccgcgtggcctcccggacctcacccctgcgtgtgcctcccgcgtggcct-c i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233564 114 + 80997621 ACGGACCGCACCCCTgcgtgtgcctcccgcgtggcctcccggaccgcacccctgcatgtgcctcccgcgtggcctcccggacctcacccctgcgtgtgcctcccgcgtggcct-c i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216559 114 + 74645514 CCAGACCTCACCCCTGCGTGTGCCTCCCGCACGGCCTCCCAGACCGCACCCCTGCGTGTGCCTCCCGCATGACCTCAAGGACCCCACCCCTGCGTATGCCTCCCGCATGACCT-C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 204959 114 + 75148670 CCAGACCCCACCCCTGCGTGTGCCTCCCGCATGGCCTCCCAGACCTCACCCCTGCGTGTGCCTCCCGCATGGCCTCCCAGACCTCACCCCTGTGTGTGCCTCCCGCATGACCT-C i chlSab2.chr16 T 114 T 38 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=34194.000000 s hg38.chr17_GL383563v3_alt 334537 30 + 375691 GCAGACCTGACCCCTGCGTGTGCCTCCCAC s panTro4.chr17 308053 30 + 82630442 ACAAACCTGACCCCTTCGTGGGCCTCCCAC i panTro4.chr17 C 0 T 115 s rheMac3.chr16 225640 30 + 80904711 ccggacctcacccctgcgtgtgcctcccgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233678 30 + 80997621 ccggacctcacccctgcgtgtgcctcccgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216673 30 + 74645514 CCAGGCCTCACCCCTGCGTGTGCCTCCCGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 205035 30 + 75148670 CCAGACCTCACCCCTGTGTGTGCCTCCCGC i chlSab2.chr16 T 38 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=398.000000 s hg38.chr17_GL383563v3_alt 334567 1 + 375691 A s panTro4.chr17 307968 1 + 82630442 A i panTro4.chr17 T 115 C 0 s rheMac3.chr16 225670 1 + 80904711 g i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233708 1 + 80997621 g i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216703 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 205065 1 + 75148670 A i chlSab2.chr16 C 0 C 0 e mm10.chr11 75946471 8 + 122082543 I e canFam3.chr9 15775872 0 - 61074082 C e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=15158.000000 s hg38.chr17_GL383563v3_alt 334568 13 + 375691 TGACCTCACAGAC s panTro4.chr17 307969 13 + 82630442 TGACCGCACAGAT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225671 13 + 80904711 tggcctcccgGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233709 13 + 80997621 tggcctcccgGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216704 13 + 74645514 TGACCTCACGGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 205066 13 + 75148670 TGACCTCCCAGGC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15775872 13 - 61074082 TGAGGTCACAGGC i canFam3.chr9 C 0 I 2 e mm10.chr11 75946471 8 + 122082543 I e calJac3.chrUn_GL286409 1017008 0 - 1291538 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=2100.000000 s hg38.chr17_GL383563v3_alt 334581 1 + 375691 C s panTro4.chr17 307982 1 + 82630442 C i panTro4.chr17 C 0 C 0 s rheMac3.chr16 225684 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233722 1 + 80997621 C i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216717 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1017008 1 - 1291538 C i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15775887 1 - 61074082 C i canFam3.chr9 I 2 C 0 e mm10.chr11 75946471 8 + 122082543 I e chlSab2.chr16 205079 0 + 75148670 C e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 189871 5669 + 73212453 I a score=49373.000000 s hg38.chr17_GL383563v3_alt 334582 31 + 375691 TGACCCCTGCGTGTGCCTCCCACATGACCTC s panTro4.chr17 307983 31 + 82630442 TGACCCCTGCCTGTGCCTCCCACGTGACCTC i panTro4.chr17 C 0 I 13469 s ponAbe2.chr17 195540 31 + 73212453 TGACCCCTGCGTGTTCCTCCCACCAGACCTC i ponAbe2.chr17 I 5669 C 0 s rheMac3.chr16 225685 31 + 80904711 TCACCCCTGCGTGTGCCTCCCGCACGGCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233723 31 + 80997621 TCACCCCTGCGTGTGCCTCCCGCACGGCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216718 31 + 74645514 TCACCCCTGCATGTGCCTCCCGCATGGCCTC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1017009 31 - 1291538 TGAGTCCTGCTCACGCCTCCCACCAGACCTC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15775888 31 - 61074082 CGACCCTCATGCACACCTCCCACCAGAAGTC i canFam3.chr9 C 0 C 0 e mm10.chr11 75946471 8 + 122082543 I e chlSab2.chr16 205079 0 + 75148670 C e nomLeu3.chr19 299138 788 - 81552678 M a score=4806.000000 s hg38.chr17_GL383563v3_alt 334613 5 + 375691 ACAGA s ponAbe2.chr17 195571 5 + 73212453 ACAGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 225716 5 + 80904711 CCAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233754 5 + 80997621 CCAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216749 5 + 74645514 CCAGG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1017040 5 - 1291538 ACAGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15775919 5 - 61074082 ACATG i canFam3.chr9 C 0 C 0 e mm10.chr11 75946471 8 + 122082543 I e chlSab2.chr16 205079 0 + 75148670 C e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=-5401.000000 s hg38.chr17_GL383563v3_alt 334618 2 + 375691 CA- s ponAbe2.chr17 195576 2 + 73212453 CG- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 225721 1 + 80904711 C-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233759 1 + 80997621 C-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216754 1 + 74645514 C-- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1017045 1 - 1291538 C-- i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75946479 1 + 122082543 C-- i mm10.chr11 I 8 I 4 s canFam3.chr9 15775924 2 - 61074082 C-A i canFam3.chr9 C 0 C 0 e chlSab2.chr16 205079 0 + 75148670 C e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=171186.000000 s hg38.chr17_GL383563v3_alt 334620 85 + 375691 ----------TCTCCTGTCCCCCATCACAGGCCCATGT------ACAGTCACCAGGGTTTCCAGGCACCTGAATCCGCACCACTGGGTTTTAAATCACAGG s ponAbe2.chr17 195578 85 + 73212453 ----------TCTCCTGTCCCCCATCGCAGGCCCAGGT------ACAGTCACCAGGGTTTCCAGGCACCTGAATCCACACCACTGGGCTTTAAATCACAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 225722 85 + 80904711 ----------TCTCCTGTGCCCCATCACAGGCCCAGGT------ACAGTCACCAGGGTTTCCAGGCACCTGAATCCGCACCACTGGGCTTTACATCGCAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 233760 85 + 80997621 ----------TCTCCTGTGCCCCATCGCAGGCCCATGT------ACAGTCACCAGGGTTTCCAGGCACCTGAATCCGCACCACTGGGCTTTCCATCGCAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 216755 85 + 74645514 ----------TCTCCTGTCCCCCATCACAGGCTCATGT------ACAGTCACCAGGGTTTCCAGGCACCTGAATCCGCACCACTGGGTTTTACATCACAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 205079 85 + 75148670 ----------TCTCCTGTCCCCCATCACAGGCCCATGT------ACAGTCACCAGGGTTTCCAGGCACCTGAATCCACACCACTGGGCTTTACATCACAGG i chlSab2.chr16 C 0 I 1692 s calJac3.chrUn_GL286409 1017047 84 - 1291538 ----------CCTCCT-TCCCTCCTCACAAGCCCATCC------ACAATCTCCGGGGCTTCCAGGCACCCAGATCCACACCACTGGGCTTTGAACAGCAGG i calJac3.chrUn_GL286409 I 1 C 0 s mm10.chr11 75946484 68 + 122082543 ----------CCTTCAGTCCCCAGTTATAAGCCTATTTTATTCCAAGATCACCAGGGCT-----------------------CTGCATTTCAAACAGCAGG i mm10.chr11 I 4 C 0 s canFam3.chr9 15775926 100 - 61074082 TTTCCTGTCCCCTCTCATGCCCCATCAGAGGCCCATTT-ATTCCACAACCCCCAGGGTTTGGAGGCACCTGAATCAGTGCTACTGAGTTTTAAAAGGCAGG i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=311769.000000 s hg38.chr17_GL383563v3_alt 334705 218 + 375691 AGAAAGTGAGTCAATGACAATAACAAGAATCCTTTTCAGCAAGTTTGTCAGGC-GGCAT---GGACC-GTCCTTTCTTTTCTG-GGGGAAGTGACGGAATTCACAAAGCTAGTAAGATTAACACTAAATTCTGGAATGTTCCCTG-CCCAGTCAAGTGCTGAAATTGAAGGC-AAAAAAAAGGA--GGGGTGATACACAGTCGAAGGGCTGAGTTTGCCAATCAGTTC s ponAbe2.chr17 195663 220 + 73212453 AGAAAGTGAGTCAATGACAATAATGAGAATCTTTTTCAGCAAGTTTGTCAGGCGGGCAT---GGACC-ATCCTTTCTTTTCTG-GGGGAAGTGACAGAATTCACAAAGGTAGTAAGATTAACTCTAAATTCTGGAATGTTCCCTG-CCCAGTCAAGGGCTGAAAGTGAAGGCAAAAAAAAAGGA--GGGGTGATACACAGTCGAAGGGCTGAGTGTGCCAATCAGTTC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 225807 214 + 80904711 AGAAAACGAGACAATGAC---AACAAGGATCCTTTTCAGCACGTTTGTCAGGCGGGCAC---GGACC-GTCCTTTCTTTTCTG-GGGGAGGTGACAGAATTCACAAAGGTAGTAAGATTAACTCTAAATTCTGGAACGTTCCCTG-CCCAGCCACGTGCTGAAAGTGAGGGC-AAAAAAAAGGA--GGGGTGATACACAGTTGAAGGGCT--GTTTGCAAATCAGTTC i rheMac3.chr16 C 0 I 1 s macFas5.chr16 233845 213 + 80997621 AGAAAACGAGACAATGAC---AACAAGGATCCTTTTCAGCACGTTTGTCAGGCGGGCAC---GGACC-GTCCTTTCTTTTCTG-GGGGAGGTGACAGAATTCACAAAGGTAGTAAGATTAACTCTAAATTCTGGAACGTTCCCTG-CCCAGCCACGTGCTGAAAGTGAGGGC-AAAAAAAAGGA---GGGTGATACACAGTTGAAGGGCT--GTTCGCAAATCAGTTC i macFas5.chr16 C 0 I 1 s papAnu2.chr16 216840 216 + 74645514 AGAAAATGAGTCAATGAC---AACGAGGATCCTTTTCAGCACGTGTGTCAGGCGGGCAC---GGACC-GTCCTTTCTTTTCTG-GGGGAAGTGACGGAATTCACAAAGGTAGTAAGATTAACTCTAAATTCTGGAACGTTCCCTG-CCCAGCCACATGCTGAAAGTGAGggc-aaaaaaaaaggagggggtgATACACAGTTGAAGGGCT--GTTTGCAAATCAGTTC i papAnu2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 1017131 210 - 1291538 -AGAAATGAGTCGATGACAGTAACTAGGGCCCTTTCCAGCAAGCTGCTCAGGCAGGCAC---GGACC-GTCCTTTCTCTTCT--GGGGAAGTGAGAGAATTCACAAAGACAGTAAGATGACCTCTAAATTCTGGAACGTTCCCTG-CCCAGTCAAGGGCTG-AAGTGAAGGC--GAAAAAAGGA---GGGCAGAACACA----AAGAGCTGGGTTTGCAAATCAGTGC i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75946552 193 + 122082543 TGAAAAGGAGACAATGGCCG-GTCTGCGGGCCTTTTCAATAAAATTTTCAGGAGGACACACAGGCCA-GGCCTTTCTTTTCTGAGGGGAACTAAC--AATTTGCAGAGGTAGTCTGACT---------TTCTAGAATTTTACCTG-CCCGGTAA-------------AGGGC-CAAAAAGAGGA--GAAGGGG-----AGAGGGAAGGTTGTGTCTGCCAATGGATTC i mm10.chr11 C 0 C 0 s canFam3.chr9 15776026 207 - 61074082 TGAAAACAAGACAAGGACACTAACTGGGGCCCTTTTCAACAAGTCTGTCAGCAGGGCAC---GGGTTAGGTCTTTCTTTTCTG-GGGGAACTGACAGACTTCACAAAGGTAGTAAGACTAATTCTAAATTCTGGAATGTTCCCTGCCCCAGTCAAGGGTTGAAAGTAAAGGC--CAAAAGAGGA--GGGGAAATGGACA-------------GTCTGCAAACCAGTTC i canFam3.chr9 C 0 C 0 e chlSab2.chr16 205164 1692 + 75148670 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=1692.000000 s hg38.chr17_GL383563v3_alt 334923 3 + 375691 AAG s calJac3.chrUn_GL286409 1017341 3 - 1291538 AAG i calJac3.chrUn_GL286409 C 0 I 6 s mm10.chr11 75946745 3 + 122082543 AAG i mm10.chr11 C 0 C 0 s canFam3.chr9 15776233 3 - 61074082 AAG i canFam3.chr9 C 0 C 0 e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217056 1 + 74645514 I e rheMac3.chr16 226021 1 + 80904711 I e macFas5.chr16 234058 1 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 195883 0 + 73212453 C e panTro4.chr17 308014 13469 + 82630442 I a score=273.000000 s hg38.chr17_GL383563v3_alt 334926 1 + 375691 T s mm10.chr11 75946748 1 + 122082543 T i mm10.chr11 C 0 C 0 s canFam3.chr9 15776236 1 - 61074082 T i canFam3.chr9 C 0 I 257 e calJac3.chrUn_GL286409 1017344 6 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217056 1 + 74645514 I e rheMac3.chr16 226021 1 + 80904711 I e macFas5.chr16 234058 1 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 195883 0 + 73212453 C e panTro4.chr17 308014 13469 + 82630442 I a score=549.000000 s hg38.chr17_GL383563v3_alt 334927 34 + 375691 tgagaggtgacagcgtgctggcagt-cctcagagc s mm10.chr11 75946749 32 + 122082543 ---GACAGAACCTTGTGTAGTTAGTCCCTCAGAGC i mm10.chr11 C 0 I 316 e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017344 6 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217056 1 + 74645514 I e rheMac3.chr16 226021 1 + 80904711 I e macFas5.chr16 234058 1 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 195883 0 + 73212453 C e panTro4.chr17 308014 13469 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 334961 1136 + 375691 cctcgcttgctctcggcacctcccctgcctgggctcccactttggtgacacttgaggagcccttcggccctccgctgcactgtgggagcccctttctgggctggccaaggctggagcccactccctcagcttgcagggaggtgtggagggagaggcaccagtgggaaccggggctgtgtgcggcgcttgcgggccagctggagttccgggtgggcgtgggcttggcgggccccgcactcggagcagcgagtcagccctgctggccccggacaatggggaacttagcacccgggccagcggctgcagagggtgtactgagtcccccagcagtgccggctcaccggcctgcccgacgagcgccgccccctgctccacggcacccagtcccaacgaccacccaagggctgaggaatgcgagtgcacggcgcaggactggcaggcagctccacctgcagccccggtgcgggatccactaggtgaagccagctgggctcctcagtctggtggggaggtggagagtctttatgtctagctcaaggtttgtaaacacaccaatcagcaccctgtgtttagctcaaggtttgtgaatgcaccaatcgacactctgtatctagctgctctggtggggccttggagaacctgtgtgtggaaactctgtatctaactaatctgatggggagtggagaacctttgtatctagctcagggattgtaaacgcaccaatcagcaccctgacaaaacaggccgcttggctctaccaatcagcaggatgtaggtggggccagataagagaataaaagcaggctgtccgagccagcattggcaaccagctccggtccccttccacactgtggaggctttgttctttcactctttgcaataagtcttgctactgctcactctttgggtccacgctgcttttatgagctgtaacactcaccgcgaagatctgcagcttcactcctgagcccagcgagaccacgaacccaccagagggaagaaactccgaacacatctgaacatcagaagggacagactccagacgcgccacctgaagagctgtaacactcaccgcgagggtctgcggcttcattcttgaagtcagtgagaccaagaacccaccaattccggacaca e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017344 6 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217056 1 + 74645514 I e rheMac3.chr16 226021 1 + 80904711 I e macFas5.chr16 234058 1 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 195883 0 + 73212453 C e panTro4.chr17 308014 13469 + 82630442 I a score=91.000000 s hg38.chr17_GL383563v3_alt 336097 1 + 375691 A s ponAbe2.chr17 195883 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017344 6 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217056 1 + 74645514 I e rheMac3.chr16 226021 1 + 80904711 I e macFas5.chr16 234058 1 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=6730.000000 s hg38.chr17_GL383563v3_alt 336098 7 + 375691 AGTGACC s ponAbe2.chr17 195884 7 + 73212453 AGTGACC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 226022 7 + 80904711 AGTGACC i rheMac3.chr16 I 1 C 0 s macFas5.chr16 234059 7 + 80997621 AGTGACC i macFas5.chr16 I 1 C 0 s papAnu2.chr16 217057 7 + 74645514 AGTGACC i papAnu2.chr16 I 1 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017344 6 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=303322.000000 s hg38.chr17_GL383563v3_alt 336105 326 + 375691 AAATAGGGTCTCATGTGGTTTATTCCTAGAGGCCGACGGATCCCAGGCAGCAGGTTATCCGAAGAAAATGGGAGGGGACTTTGAATACAGGTAACCTCGCCACACATC-----AACGATGTCCCTTCCCCTCCATAGCTGACCTCGCCAGCCATCAACGACCTTCCTTCCctccctggccttcctgtagctgtccagccaccttcaggggtgggctccggaggccctgagtttacactgcggccagtcccctggggcacagctggctcttccaggggagcacctaagccaaactggcacatcaaggtccctcccttaagaatccgggaAAT s ponAbe2.chr17 195891 326 + 73212453 AAATAGGGTCTCTTGTGGTTTATTCCTAGAGGCAGACGGATCCTAGGCAGCAGGTTATCCGAAGAAAGTGGGAGGGGACTTTGAATACAGGTAACCTCGCCACACATC-----AACGATGTCCCTTCCCCTCCATAGCTGACCTTGCCAACCATCAACAACGTCCCTTCCCTCCCTGGCCTTCCTGTAGCTGTCCAGCCACCTTCAGGGGTGGGCTCCGGAAGCCCTGAGTTTACACTGCAGCCAGTCCCCTGGGGCCCAGCTGGCTCTTCCAGGGGAGCACCTAAGCCAAACTGGCACCTCAAGGTCCCTCCCTTAAGAATCTGAGAAAT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 226029 266 + 80904711 AAATAGGGTCTCCTGTGGCTGATTCCTAGAGGCGGCCGGATCCCAGGCAGCAGGTTATCCGAAGAAAGTGGGAAGGGACTTTGAACACAGGCAACCTCGCCACCCACC-----AACGCCGTC------------------------------------------------------------CCTGTagctgtccagccaccgtcaggggtgggctctggaagccctgagtttaccctgcggccaggcccctggggcccagctggctcttccaggggagtgcctaagccaaactggcacatcaaggtccctcccttaagaatctgggaAAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 234066 266 + 80997621 AAATAGGGTCTCCTGTGGCTGATTCCTAGAGGCGGCCGGATCCCAGGCAGCAGGTTATCCGAAGAAAGTGGGAAGGGACTTTGAACACAGGCAACCTCGCCACCCACC-----AACGCCGTC------------------------------------------------------------CCTGTagctgtccagccaccgtcaggggtgggctctggaagccctgagtttaccctgcggccaggcccctggggcccagctggctcttccaggggagtgcctaagccaaactggcacatcaaggtccctcccttaagaatctgggaAAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 217064 266 + 74645514 AAATAGGGTCTCGTGTGGCTGATTCCTAGAGGCGGCCGGATCCCAGGCAGCAGGTTATCCGAAGAAAGTGGGAAGGGACTTTGAATACAGGCAACCTCGCCACCCACC-----AACGACGTC------------------------------------------------------------CCTGTAGCTGTCCAGCCACCGTCAGGGGTGGGCTCTGGAAGCCCTGAGTTTACACTGCGGCCAGGCCCCTGGGGCCCAGCTGGCTCTTCCAGGGGAGTACCTAAGCCAGACTGGCACATCAAGGTCCCTCCCTTAAGAATCTGGgaaac i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1017350 287 - 1291538 AAATGGGGTCTCGTGTGGTTTATTCCTAGAGGCTGACGGATCCCAGGCAGCGAGTTACCCAAGGGGAGTGGGAAGGGACTTCGGATACAGGTCACCCAGCCCCCTGCCTGTCAGCTGATGCC-----------------------------------------CCTTTCCCTGCCTGGCCTCCCTGTCACTCTCTAGCCACCTTCAGGGGTGGGCTCCAGAAGCCCCGGGTTTACACTGTGGCCAGTCCCCT-GGCCCCAGCTGGCTTTTCCAGGG--ACACCTAAGCCACATTGGCACATCATGGTCCCTCCCTTAAGAATCTGAGAAAT i calJac3.chrUn_GL286409 I 6 I 7491 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=336493.000000 s hg38.chr17_GL383563v3_alt 336431 429 + 375691 AAggctgggcgcggtggctcactcctgtaatcacaacactgcgggaggccgaggaaggaggattgcttagaggtcaggagttcgagatcagcctgggcaacatagtcaaaccccatttctacaaaaaaataaacataggtcaggcatggtggctcacgcctgtaatcccagtgatttgggaggctgaggtgagaggatcgtttgagtccgggagtttggggctgcagcgagctacgatcataccactgcactccagcctgcgcaacagagcgagactctttcttgaaaaatttaaaaa----a-taaaTTAAATTTTAAAAAAGTAAggccaggagt--------agtggcccacacctgtaatcctagcactttggcaggctgagat---aggatcacttgagctcaggacttcaagacgagcctgggcaacacagtgagacac s ponAbe2.chr17 196217 433 + 73212453 AAggctgggcacggtggctcactcctgtaatcacagcactgtgggaggctgaggaaggaggattgcttggaggtcaggagttcgagaccagcctgggcaacagagtgaaaccccatttctacaaaaaaataaacataggtcaggcatggtggctcacgcctgtaatcccagtgcttcgggaggctgaggtgagaggatcgtttgagtccaggagtttggggctgcagcgagctatgatcataccaccgcactccagcctgcgcaacagagcgagactctttcttgaaaaatgtaaaaa----aTTTAAATAAATTTTTAAAAAGTAAGgccaggaga--------agtggctcacacctgtaatcctagcactttgggatgctgagataggaggatcacttgagctcaggacttcaagacaagcctgggcaacacagtgagacac i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 226295 437 + 80904711 AAggctgggcacggtggctcactcctgtaatcacaacaatttgggagcacgaggcacgaagattgcttggaggccaggagttcaagaccagcctgggcaacatagtgaaaccccatttctacaaaaaaataaacgtaggtcaggtgtggtggctcacgcctgcaatcccagtgctttgggaggcggaggtgagaggatcgtctgagtccaggagttcgaggctgcagcaagctatgatcacaccactgcactccagcctgcgcaacggagcgagactctgtctctaaaaattaaaaaataagaTTAAACTGATTTTTAAAAACTTAAggccaggaga--------agtggctcacatctgtgaccctagcactttgggaggctgagctgggaggatccctcgagctcaggacttcaagacgagcctgggcaacacagtgagacac i rheMac3.chr16 C 0 I 1040 s macFas5.chr16 234332 437 + 80997621 AAggctgggcacggtggctcactcctgtaatcacaacactttgggaggccgaggcaggaagattgcttggaggccaggagttcaagaccagcctgggcaacatagtgaaaccccatttctacaaaaaaataaacgtaggtcaggtgtggtggctcacgcctgcaatcccagtgctttgggaggctgaggtgagaggatcgtatgagtccaggagttcgaggctgcagcaagctatgatcacaccactgcactccagcctgcgcaacagagcgagactctgtctctaaaaattaaaaaataagaTTAAACTGATTTTTAAAAACTTAAggccaggaga--------agtggctcacatctgtgaccctagcactttgggaggctgagctgggaggatccctcgagctcaggacttcaagacgagcctgggcaacacagtgagacac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 217330 442 + 74645514 aaggctgggcacggtggctcactcctgtaatcacaacactttgggaggccgaggcaggaagattgcttggaggccaggagttcaagaccagcctgggcaacatagtgaaaccccatttctacaaaaaaataaacgtaggtcaggtgtggtggctcacgcctgcaatcccagtgctttgggaggctgaggtgagaggatcgtttgagtccaggagttcgaggctgcagcgaactatgatcacaccactgcactccagcctgcgcaacagagcgagactctgtctctaaaaattaaaaaataagattaaacttattttctaaaaa-taaggccaggaggccgggcgcagtggctcaagcctgtaatcccagcactttgggaggccgagacgggtggatca--caaggtcaggagatagagaccatcctggctaacccggtgaaaccc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017637 7491 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=7120.000000 s hg38.chr17_GL383563v3_alt 336860 35 + 375691 agtagagccttgtctactaaaaatttaaaaaaaca s ponAbe2.chr17 196650 35 + 73212453 agtagagccttgtctactaaaaatttaaaaaaaca i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 234769 32 + 80997621 gctagcgccttgtctactaaaaaatttttaaa--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 217772 26 + 74645514 --------cgtctctactaaaaaatacaaaaaac- i papAnu2.chr16 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017637 7491 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e rheMac3.chr16 226732 1040 + 80904711 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=7319.000000 s hg38.chr17_GL383563v3_alt 336895 88 + 375691 gccggggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtagat--catgaggtcaggagatcga----------gac--------------------- s macFas5.chr16 234801 86 + 80997621 ----taaccgggtgtggtggtgcacgcctgtagtcccagcttctctggagactgaagtaggaggatcactttagcctgggaggtcga----------agc--------------------- i macFas5.chr16 C 0 I 541 s papAnu2.chr16 217798 116 + 74645514 ----tagctgggcgaggtggcg-gcacctgtagtcccagctacttgggaggctgaggcaggagaatggcataaacccaggaggtggagcttgcagtgagctgagatctggccactgtactc i papAnu2.chr16 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017637 7491 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e rheMac3.chr16 226732 1040 + 80904711 I e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 196685 0 + 73212453 C e panTro4.chr17 308014 13469 + 82630442 I a score=2056.000000 s hg38.chr17_GL383563v3_alt 336983 48 + 375691 catcctggctaacaaggtgaaaccccgtctctactaaaaatacaaaaa s papAnu2.chr16 217914 48 + 74645514 cagcctggaccacagagcgagactctgtctccaaaaaaaaaaaaaaaa i papAnu2.chr16 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017637 7491 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e rheMac3.chr16 226732 1040 + 80904711 I e macFas5.chr16 234887 541 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 196685 0 + 73212453 C e panTro4.chr17 308014 13469 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 337031 294 + 375691 attagccgggcgcggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaagcggagcttgcagtgagccgagattgcgccactgcagtccgcagtccggcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaacagccggatgtggtggtgtgtgGCCGGGTGTGGTGGCGTGTGGCCGGGCGTGGTGGCATGTGGCCAGGCGTGGTGGCATGTGGCCGGGCGTGGTGGCATGTGGCCGGGCGTGGTGGCGTGTG e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017637 7491 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 226732 1040 + 80904711 I e macFas5.chr16 234887 541 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e ponAbe2.chr17 196685 0 + 73212453 C e panTro4.chr17 308014 13469 + 82630442 I a score=2666.000000 s hg38.chr17_GL383563v3_alt 337325 40 + 375691 GCCGGGTGTGGTGGCGTGTAGCCAGGTTTGGTGGTGTGta s ponAbe2.chr17 196685 40 + 73212453 gccgggtgtggtggcacgtgGCCGGGTGTGGTGGCACGtg i ponAbe2.chr17 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e calJac3.chrUn_GL286409 1017637 7491 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 226732 1040 + 80904711 I e macFas5.chr16 234887 541 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=23247.000000 s hg38.chr17_GL383563v3_alt 337365 101 + 375691 gccgggtatggtggtgcacacatgtggtcctagctactctggagactgaagcaggagaatcactttagcctgggaggtcgaagctgcaatgagtcTCATTC s ponAbe2.chr17 196725 101 + 73212453 gccggatgtggtgatgcacacgtgtggtcctagctactctggagactgaaacaggagaatcactttagcctgggaggtcaaagctgcaatgagtcTCATTC i ponAbe2.chr17 C 0 C 0 s calJac3.chrUn_GL286409 1025128 101 - 1291538 gccaggtgtggtgtcatgcacctgtagtcccagctaccctggagactgaagtaggagaatcgctttagcctgggaggtcgaggctgcaatgagtcTCATAG i calJac3.chrUn_GL286409 I 7491 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 226732 1040 + 80904711 I e macFas5.chr16 234887 541 + 80997621 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=7604.000000 s hg38.chr17_GL383563v3_alt 337466 39 + 375691 -------------atagatagatagatgga------------tggatggatggacggacggaca---------------------- s ponAbe2.chr17 196826 50 + 73212453 -------------atagatagatagatagagagat-gatagatagatagatagacagatagata---------------------- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 235428 39 + 80997621 -------------atagacagatagataga------------tagacagacagacagacagaca---------------------- i macFas5.chr16 I 541 C 0 s calJac3.chrUn_GL286409 1025229 86 - 1291538 ATatacatagatgatagatggatggatggatggatggatggatagatagatagatagagagatgatagatGACAGAGTTTCACTCa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 226732 1040 + 80904711 I e nomLeu3.chr19 299138 788 - 81552678 M e panTro4.chr17 308014 13469 + 82630442 I a score=6972.000000 s hg38.chr17_GL383563v3_alt 337505 8 + 375691 gatagata s ponAbe2.chr17 196876 8 + 73212453 gatagata i ponAbe2.chr17 C 0 I 29 s nomLeu3.chr19 299929 8 - 81552678 gatagata i nomLeu3.chr19 M 788 C 0 s macFas5.chr16 235467 8 + 80997621 gatagaca i macFas5.chr16 C 0 I 6 s calJac3.chrUn_GL286409 1025315 8 - 1291538 gatagata i calJac3.chrUn_GL286409 C 0 I 2 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 226732 1040 + 80904711 I e panTro4.chr17 308014 13469 + 82630442 I a score=2617.000000 s hg38.chr17_GL383563v3_alt 337513 8 + 375691 tacacagg s nomLeu3.chr19 299937 8 - 81552678 tacataga i nomLeu3.chr19 C 0 I 2 s macFas5.chr16 235481 8 + 80997621 cagacaga i macFas5.chr16 I 6 I 2 s calJac3.chrUn_GL286409 1025325 8 - 1291538 tacacagg i calJac3.chrUn_GL286409 I 2 I 59 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 226732 1040 + 80904711 I e ponAbe2.chr17 196884 29 + 73212453 I e panTro4.chr17 308014 13469 + 82630442 I a score=1078.000000 s hg38.chr17_GL383563v3_alt 337521 29 + 375691 gatatatacatagagtttca----------------------------------------------------tagatagat------------ s ponAbe2.chr17 196913 47 + 73212453 gatatatacatagagtttcactcatagatagag----------------tttc------------------atagataaat------------ i ponAbe2.chr17 I 29 C 0 s nomLeu3.chr19 299947 42 - 81552678 gatatatacatagagtttcacgcatagatagtt---------------------------------------ttcatagat------------ i nomLeu3.chr19 I 2 C 0 s macFas5.chr16 235491 23 + 80997621 gatagacagacaga----------------------------------------------------------cagacagac------------ i macFas5.chr16 I 2 I 5 s calJac3.chrUn_GL286409 1025392 93 - 1291538 gatagatacacagaGTTTCACCCagagagagaaagagagagagagagagaTTCACTCAGATGAAGagacagacagacagacagaaagatagat i calJac3.chrUn_GL286409 I 59 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 226732 1040 + 80904711 I e panTro4.chr17 308014 13469 + 82630442 I a score=21014.000000 s hg38.chr17_GL383563v3_alt 337550 26 + 375691 --------gacagatagacaga--------CAAAAAGCAAAA s ponAbe2.chr17 196960 34 + 73212453 --------gacagatagatagatagaaagaCAAAAAGCAAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 299989 26 - 81552678 --------gacagatagacaga--------cagaaagtaaaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 227772 26 + 80904711 --------gacagacagacaga--------caAAAACTAAAC i rheMac3.chr16 I 1040 C 0 s macFas5.chr16 235519 26 + 80997621 --------gacagacagacaga--------caAAAACTAAAC i macFas5.chr16 I 5 C 0 s calJac3.chrUn_GL286409 1025485 31 - 1291538 gagtcatagatagacagacaga--------caga---TAAAA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75946781 316 + 122082543 I e canFam3.chr9 15776237 257 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e panTro4.chr17 308014 13469 + 82630442 I a score=79016.000000 s hg38.chr17_GL383563v3_alt 337576 96 + 375691 AGAATCTGGGAAATGGGGTAAGAGACGGAGTCTCAACTCAACTGCCTTTTG---CAGTAAGATGCACA--CTGAGGCT-----GAGGCCATTT-TCCCCTCATGGAA s ponAbe2.chr17 196994 96 + 73212453 AGAATCTGGGAAATGGGGTAAGAGACAGAGTCTCAACTCAACTGCCTTTTG---CAGTAAGATGCACA--CTGAGGCT-----GAGGCCATTT-TCCTCTCGTGGAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 300015 63 - 81552678 agaATCTGGGAAATGGAGTAAGAGACGGGGTCTCAACTCATTTGCCTTTTG---CAGTAAGATGCA----------------------------------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 227798 95 + 80904711 AGAATCTGGGAAATGGGATAAGAGACTGAGTCTCAGC-----TGCCCTTTG---CGTTAAGAGACGCA--CTGAGGCTGGT-GGAGGGCTGTT-TCCCCTCATGGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 235545 95 + 80997621 AGAATCTGGGAAATGGGATAAGAGACTGAGTCTCAGC-----TGCCCTTTG---CGTTAAGAGACGCA--CTGAGGCTGCT-GGAGGGCTGTT-TCCCCTCATGGAA i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1025516 99 - 1291538 AGAATCTGGGACATGGAGTAAGAGA--GAGTCTCAACTCAACTGTCTTTTG---CAGTAAGATGCACA--CTTAGGCTGACAGAGGGGTTGTT-TTCCCTCATGGAA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15776494 100 - 61074082 aaaatctgggaaatgggtaaa-------agtctcaactcagctgctctctggaacagtaagatgtaaagccaggagctgatactgggcctattgtccccatgtggac i canFam3.chr9 I 257 C 0 e mm10.chr11 75946781 316 + 122082543 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e panTro4.chr17 308014 13469 + 82630442 I a score=559595.000000 s hg38.chr17_GL383563v3_alt 337672 574 + 375691 ATGTCCAGTTGACAGAAACGGAAAGGTGGCCTGCAGTGAGACCGAGAAGAGGGGAGCCAACATGGAG-CTGAAGCAGGACAGAGAGAGGGGCCCC-----TCCCTCTAGCATTTGTGCTCCATTCAGCCCCTCCAGGGGCCTGAGCGTTGAAATCTTCCTCTGCTTCTATGAGATACTCCAGGGCCTTGGCAGTAAAGTTC-CCTTTTTGTCCAGCCTCTGCTGTTTGCAACCAGCCCCAGTGAGCCGCAAGTCCTAGCTGGCCTGATT----------------------AATATCATGTCCACTTTCCCACCACCCTTCCATCC---A----GCAAAACCACCTCACGCC-ACGCTGAGCTGACTGAGAATACCTGGGAGTATTCAAATCAGTGGCCGGGGGAGAACAAAGGTTTCG-GTGG-CAGAGGGACC------CAGGTCCGGGTCCATCTAGCACAGTGACCTTGAA---TAAACCT-CCCGAAGCGTAATCTCCTC---CATCTGGGCTGCTGCCGATACCTCCTCAAATCCACTCCCGGCCCTCCC-----TGGTCTCTTCTCCTCACTATCCCCACAGTGAGCTCCCCAAAATGTCAGCCCTTGCCAGGTAACGCGCATT s ponAbe2.chr17 197090 562 + 73212453 ATGCCCAGTTAACAGAAACAGAAAGGTGGCCTGCAGTGAGACAGAGAAGAGGGGAGCCGACATGGAG-CCGAAGCAGGACAGAGAGAGGGGCCCC-----TCCCTCTAGCATTTGTGCTCCATCCAGCCCCTCCAGGGGCCTAAGCGTTGAAATCTTCCTCAGCTTCTATGAGATACTCCAGTGCCTTGGCAGTAAAGTTC-CCTTTTCGTCCAGCCTCTACTGTTTGCAACCAGCCCCAGTGAGCTGCAAGTCCTAGCCGGCCTGAGT----------------------AAGATCATGTCCACTTTCCCACCACCCTTCCATCC---A----GCAA---------ACACC-ACGCTGAGCTGACCGAGAATACCTGAGAGTATTCAAATCAGTGGCCAGGGGAGAGCAAAGGTTTCA-GTGG-CAGAGGGACC------CAGGTCTGGCTCCATCTAGCACAGTGACCTTGAA---TAAACCT-CCCGAAATGTAAT---CTC---CATCTGGGCTACTGCCGATACCTCCCCAAATCCACTCCCAGCCTTCCC-----TGTTCTCTTCTCCTCACTATCCCCACAGTGAGCTCCTCAAAATGTCAGCCCTTGCCAGGTAACTCGCATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 300078 568 - 81552678 -----CGGTTAACAGAAACGGAAAGGTGGCCTGCAGTGACACGGAGAAGAGGGGAGCCGACATGGAG-CTGAAGCCGGACAGAGAGAGGGGCCCC-----TCCCTCTAGCATCTGTGCCCCATTCAGCCCCTCCAGGGACCTGAGCATTGAAATCTCCCTCAGCTTCTATGAGATACTCCAGGGTCTTGGCAGTAAAGTTC-GCTTTTCGTCCAGACTCTGCTGTTTGCGACCAGCCCCGGTGAGA-GCAAGTCCTAGCTGGCCTGACT----------------------AATATCATGTTCACTTTCCCACCATCCTTCCATCC---A----GCAA-ACCACCTCACGCC-ACGCTGAGCCGACTGAGAATCCCTGGGAGTATTCAGATCAGTGGCCGGGGGAGAGCAAAGGTTTTG-GTGGCCAGGGGGACC------CAGGTCTGGCTCCATCTAGCACAGCAACCTTGAA---TAAACCT-CCCGAAATGTAATTTCCTC---CATCTGGGCTACTGCCGATACCTCCCCAGATCCACTCCCAGCCCTCCC-----TGGTCTCTTCTGCTTGCTATCCCCACAGTGAACTCCCCAAAATGTCAGCCTTTGCCAGGTAACTCGCATT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 227893 507 + 80904711 ATGCCCAGTTAACAGAAACGGAAAGGTGGCCTGCAGTGAG---------------TCCGACAGAGAG-CCGAAG-AGGGCAGAGAGA-GGGCCCC-----TCCCTCTAGCATTTGGGCTCC-TTCAGCCCCTCCAGGGGCCTGAGTGTTGA----------------------------------------AGTAAAGTTC-GCTTTTCGTCCAGTCGCTACCGTTTACAACCAGCCCCAGTCAGCCGCGAGTCCT----GGCCTGATG----------------------AACATCACGTCCACTTTCCCACCATCCTCCCACCC---A----GCAAGGCCACCGCAGGCC-TCGCTGAGCTGATCGAGAATACCCGGGGG-ATTCAAATCAGTGGCC-GGGGACAGCAAAGGTTTTG-GCGC-CAGAGGGACC------CAGGTCTGGCTCCGTCTAGCACAGCAACCTTGAA---TAAACCT-CCGGAAATGTAATTTCCTC---CATCCGGGCTGCTGCCGATCCCTCCCCAGACCCACTCCCGGCCCTCGC-----TGGTCTCTT---CTCACCATCGCCACAAGGAGCTCTTCGAAACGTCAGCCCGTGCCAGGTAACTCGCATT i rheMac3.chr16 C 0 I 35 s macFas5.chr16 235640 507 + 80997621 ATGCCCAGTTAACAGAAACGGAAAGGTGGCCTGCAGTGAG---------------GCCGACACAGAG-CCGAAG-AGGGCAGAGAGA-GGGCCCC-----TCCCTCTAGCATTTGGGCTCC-TTCAGCCCCTCCAGGGGCCTGAGTGTTGA----------------------------------------AGTAAAGTTC-GCTTTTCGTCCAGCCGCTACCGTTTACAACCAGCCCCAGTCAGCCGCGAGTCCT----GGCCTGATG----------------------AACATCACGTCCACTTTCCCACCATCCTCCCACCC---A----GCAAGGCCACCGCAGGCC-TCGCTGAGCTGATCGAGAATACCTGGGGG-ATTCAAATCGGTGGCC-GGGGACAGCAAAGGTTTCG-GCGC-CAGAGGGACC------CAGGTCTGGCTCCGTCTAGCACAGCGACCTTGAA---TAAACCT-CCGGAAATGTAATTTCCTC---CATCCGGGCTGCTGCCGATCCCTCCCCAGACCCACTCCCGGCCCTCGC-----TGGTCTCTT---CTCACCATCGCCACAAGGAGCTCTGCGAAACGTCAGCCCGTGCCAGGTAACTCGCATT i macFas5.chr16 C 0 I 331 s calJac3.chrUn_GL286409 1025615 589 - 1291538 ATGCCCAGTTAACAGAAGCAGAAAGGTAGCCTCCAGTGAGGCAGAGAAGAGAGGAGCTGACACAGAG--TGAAGTGAGGCAGTGAG--TAGCCCC-----TCCCTC-AGCATTTGT-CTCCACTCGG-ACCTCCAGGAGCCTGGACATTGGAATCTTCCTCAGCTTCTGTGAGACCCTCCAGCTTCCTGGCAGTACACTTC-CCTTTCCTTCAAG-CTCTACTGTTTTCAACCAGCCCCA-CAGGCCTCGAGTCCCAGCTAGCCTGATCAGTATCACGTGCCTGATTAATAAATATCACGTCCACTGGCCCGCCACCCTTCCGTCC---A----GCAAGGCCACCTTGTGCC-CCTTGGAGCTGACTGAGAACACCTGAGGGTCTTCAAATGggtggcc-agggaaagcaaaggtttcc-gtgc-cagagggacc------taggtctggctccatctagcacagtgaccttgaa---taaatctccccaaaatgtaatttcctc--tcatctgGGCTACTGCCGATACCTCCCCAAACCCACTCCTGGCCCTCCC-----TGGTCTGTTCTCTTCACTATCGTCACAGTGAGCTCTTCAAAATGTCAGCCCTCACCAGGTAACTCACatt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75947097 517 + 122082543 ATGTTCAGCCATGACAAACAG------GGTCTGCAGGGTT--AAGAGGGAAGGGAGCCAATCCAGAG-ATGAAA-CAGCCAGGAAGC-AGACACCTGGCTTCTCTCTAGAACGCATGCCCCATTCAG-TCCTCC-GTGGTCGGGGTGTACAGAGCAACCTCAGCTT-TGTAAGTTGCTCCAGTGCC-------TGACGTCCTTCTTTTTGTTCAATTGTCACCATGTGTCACCAGCCCGGGCCAGCCACAGGTACCTAGCAGCCTGCTT----------------------CATATGACA----------CGCTGCCCCTGCAACCCAGA----GTAA------------------------------AGATGACCTGGGGGTGTTCAGACCAGC-ACT-AGGGGGAGCAGAGGATTTGTGTAC-CAGGCTGGCTGCCAGGCAGATCTGTCTCCA-CTAGCAAGGTGACCTTGAACACCAAACCT-TCTGAAGTGCAGCTTTTTAAAGTGTTTGGGCTGCAGCTG---CCTCCCCAGATCCTCCTCTGTACCCCCTGCAGACAGCCAGTCATCCTGGCTACCGGCTCAATGAGTGTCCCAAAAGGCCAGTCC------------------- i mm10.chr11 I 316 C 0 s canFam3.chr9 15776594 403 - 61074082 --acctag------gagagagaagggtggtgtgcaacaaaagaaacaagagg-----ccacatggaggctgaag-----------------caTT-----TCCGTTAGGTCCGTGGGCTTGATTCAGCCTTTCCAGGGGCCGGGT----------------------------------------------GGTAAATTCC-CGTTTTTGTTCAATGGCTACAGTTTGCCACCAGCC-------------AGCCCTAGTTAGCCTGATA----------------------CATAGAAGGCCCATT---------CCCTACCATGC---AGAAGGCAAGGAGATCTCAGCCAGTCTCTGGGCGGATTAAGAATACCCAAGGGGATTCAAATCAGTGGCT---------------------GGGG-----------------GAGGTCTGGCTCCATCTAGCGGGGGAACCTTGAAcaataacctc-cctgaaacgca---------------------------gaggcctctccaaacccaccactcaccctctc-----ccatctgttctcct--ccacagtcacagagagctcttcaaaatg-------------------------- i canFam3.chr9 C 0 C 0 e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e panTro4.chr17 308014 13469 + 82630442 I a score=13712.000000 s hg38.chr17_GL383563v3_alt 338246 16 + 375691 Taaaaaagaaataaat s ponAbe2.chr17 197652 16 + 73212453 TAAAACAGAAATAAAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 300646 16 - 81552678 TAACAAAGAAATAAAT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 228435 16 + 80904711 taaaaaagaaataagt i rheMac3.chr16 I 35 C 0 s macFas5.chr16 236478 16 + 80997621 taaaaaagaaataagt i macFas5.chr16 I 331 C 0 s calJac3.chrUn_GL286409 1026204 12 - 1291538 ttaaaaagaaat---- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75947614 0 + 122082543 C e canFam3.chr9 15776997 0 - 61074082 C e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e panTro4.chr17 308014 13469 + 82630442 I a score=155296.000000 s hg38.chr17_GL383563v3_alt 338262 99 + 375691 aaaaataaaaaacaaaGCATCAGCCCTGTCACGGAACTGCCAGCCTGAAACTGCCCCAGTGGCTTCCTACTGTTCTGATGATACAAGCGAAATC--------------CTTCC- s panTro4.chr17 321483 99 + 82630442 AAAAATAAAAAACAAAGCATCAGCCCTGTCACGGAACTGCCAGCCTGAAACTGCCCCAGTGGCTTCCTACTGTTCTGATGATACAAGCGAAATC--------------CTCCC- i panTro4.chr17 I 13469 C 0 s ponAbe2.chr17 197668 98 + 73212453 AAAAATAAAAAACAAAGCATCAGCCCTGTCACGGAACTGCCAGCCTGAAACTGCCCCAGTGGCTTCCTGCTGTTCTGATGATACAAGCGAAATC--------------CT-CC- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 300662 98 - 81552678 AAAAATAAAAAACAAAGCGTCAGCCCTGTCAGGGAACTGCCAGCCTGAAACTGCCCCAGTGGCTTCCTGCTGTTCTGATGATACAAGCGAAGTC--------------CT-CC- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 228451 112 + 80904711 aaaaataaaaaACAAAGCGTCAGCCCTGTCGTGTTACTGCCAGCCTGAAACTGCCCCAGGGGCTTCCTGCTGCTCTGATGATACAAACAGAATCTGATGATTTCAGCTCT-AA- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 236494 112 + 80997621 aaaaataaaaaacaaaGCGTCAGCCCTGTCGTGGAACTGCCAGCCTGAAACTGCCCCAGGGGCTTCCTGCTGCTCTGATGATACAAACAGAATCTGATGATTTCAGCTCT-AA- i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1026216 92 - 1291538 aaaaataaaaaa-----attCAGGCTTATCATGGAAATTCCAGCCTGAATCTGCTCCAGTGGCTTCCTCCTACCTTGATGATAAAAG-GAAACC--------------CT-CC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75947614 72 + 122082543 --------------------------CAACATGCAGCTATGGGCTTGAAATGGCCCCAGTCGCTTCCTATTGCTGTTTCTATAAAACCAGAAAT--------------TT-CC- i mm10.chr11 C 0 C 0 s canFam3.chr9 15776997 77 - 61074082 --------------------cagtcctgaaatggaactctc--taggcaaatcctccaggggcttcctactgctctgaagataaaaccaaaatc--------------ct-CCC i canFam3.chr9 C 0 I 2535 e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C a score=476756.000000 s hg38.chr17_GL383563v3_alt 338361 302 + 375691 C--------CCAGGGGCCTGAGGTTTCCTTTCCACGCCGCGCGCTTTCCCCTGGGGGC---CAGGAACCCTGATTCTTCTGCCTGGGAAATGCTTCCCCCAACTCTTTCCCCACAACCCCTTTTGCCTAATTAACtc-t--ttaaaattcatt-------ttgtcaacatcattattgagatagaattcacaaaccacaaaatgtaccttttcaaagtttacaattcggtgg--ttttttggtacagtcacagggttgtgccaccatt---accgctacctaattctagaaca-ttttcatcactccacaaagaaacccatcagcagcc s panTro4.chr17 321582 305 + 82630442 C--------CCGGGGACCTGAGGTTTCCTTTCCACGCGGCGCGCTTTCCCCTGGGGGCCCACAGCAACCCTGATTCTTCTGCCTGGGAAACGCTTCCCCCAACTCTCTCCCCACAACCCCTTTTGCCTAATTAACTC-T--TTAAAATTCATT-------TTGTCaacatcattattgagatagaattcacaaaccgcaaaatgtaccttttcaaagtttacaatttggtgg--tgttttggtacagtcacagggttgtgccaccatt---accgctacctaattctagaaca-ttttcatcactccacaaagaaacccatcagcagcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 197766 306 + 73212453 C--------CCGGGGACCTGAGGTTTCCTTTCCACGCCGCGCGCTTTCCCCTGGGGACCCGCAGCAACCCTGATTCTTCTGCCTGGGAAATGCTTCCCCCAACTCTCTTCCCACAAACCCTTTTGCCTAATTAACTCAA--ATAAAATTCATT-------TTGTCaacatcattattcagatagaattcacaaaccacaaaatgtaccttttcaaagtttacaatttggtgg--ttttttggtacattcacagagttgtgccaccatt---accgctacctaattctagaaca-ttttcatcactccacaaagaaacccatcagcagcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 300760 303 - 81552678 C--------CCCAGGGCCTGAGGTTTCCTTTCCACGC--CGCGCTCTCCCCTCGGGGCCTGCAGCAACCCTGATTCTTCTGCCTGGGAAATGCTTCCCCCAACTCTCTCCCCACAACCCCTTTTGCCTAATTAACTC-T--ATAAAATTCATT-------TTGTCaacatcattattgaggtagaattcacaaaccacaaaatgtaccttttcaaagtttacaatctggtgg--gttttttgtacattcacagggttgtgccaccatt---accgctacctaattctagaaca-ttttcatcactccacaaagaaacccattagcggcc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 228563 296 + 80904711 C--------CCCGGGGCCTGAG----------CA-GCCTCGCGCTGTCCCCTCGGGGCCTGCAGGCACCCTGACCCCTCTGCCTGGG-AACGCTCCCCCCAACCCTCTCCCCAcagccccttttgcctaattaactc-t--ttacaattcatt-------ttattaacatcattattgagatataattcacaaaccacaaaatgtaccctttctaagtttacagtttggtgggtttttttggtacattcacagggttgtgccaccatt---accactacctaattctagaacatttttcatcactccacaaaccagcccattagcggcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 236606 296 + 80997621 C--------CCCGGGGCCCGAG----------CA-GCCTCGCTCTGTCCCCTCGGGGCCTGCAGGCACCCTGACCCCTCTGCCTGGG-AACGCTCCCCCCAACCCTCTCCCCACAGCCCCTTTTGCCTAATTAACTC-T--TTACAATTCATT-------TTATtaacatcattattgagatagaattcacaaaccacaaaatgtaccctttctaagtttacagtttggtgggtttttttggtacattcacagggttgtgccaccatt---accactacctaattctagaacatttttcatcactccacaaaccagcccattagcggcc i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1026308 291 - 1291538 CCGGGCCCACCTGGGGCCTGAGCTTTCCTCGCCAAGCCTTGTTCTTT--------------------CCCTGATTCTTCTGCCTGGGAAACGCTTCCCCTAACCCTCTCCCCACAGCCCCTTTGGCCTAATTAACTC-TTCTTAAGATTCATT-------TTGTtaa---cattcttgagat--aattcacaaaccataaaatgtaccctttcaaagtttacaatttggtgg----tttttgtacattcacagagttgtgtcaccattatcaccactacctaattctagaaca-tgttcatcactccacaaagaaacccattagcagcc i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75947686 274 + 122082543 T---ACACACTTGGGGCCTCTGCATGTCCTTTAATGTCACATTCCTCCCTT---GGGCCTCCAGGGTCCCTGAT--------------------------------------ACAATCTCGTTCACCTAATTATCTC-T--GTTAATTTTTTTGTTGTTGTTTTTAGCGCCAttatggagatacaattcacaaatcataaaactcgcccgtttgaagtttacagcccagtgg---gtttctgcacagtcactgagctgtgcagacgtc---tcctgtgctggatttcagggca-ttttcagcgccccagaaagaaa-gcattagcagtc i mm10.chr11 C 0 I 4950 e canFam3.chr9 15777074 2535 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C a score=781.000000 s hg38.chr17_GL383563v3_alt 338663 1 + 375691 g s panTro4.chr17 321887 1 + 82630442 g i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 198072 1 + 73212453 a i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 301063 1 - 81552678 G i nomLeu3.chr19 C 0 I 3632 s rheMac3.chr16 228859 1 + 80904711 g i rheMac3.chr16 C 0 C 0 s macFas5.chr16 236902 1 + 80997621 g i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1026599 1 - 1291538 a i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C a score=819774.000000 s hg38.chr17_GL383563v3_alt 338664 755 + 375691 ggcacagtggctcacgcctgtaatcccagcacttcaggaggccgaggcggaaggatcacctgaggtcaggagttcgagaccagcctggccaatatggtgaaaccctgtctctactaaaag------tacaaaaa--attagccaggcacggtggcggtcacctgtaatcccagctactcgggaggctgaggcaggagaaaggcgtgaacccgggaggtggagcttgcagtgagccgagattgcgccactgcgct-cagcctgggtgacagagcgagatgccatctcaaaaaaagaaagaaagaagcccattagcagccactccctcccattcctcccttctccacagtccccagaagtcacgaatctgctttctgtcttattaatttgcataatctggacatttcatataaacagaatcatataataagtggta-tttttattcacgatttc-atttttcagctctaatctctatt---atttctttccttttgcttgctttgggtttagtttgctgttctttttctagtttcttaaggtggaagattatttatttgaagtttttcttcttttttaacataggttctcacagctatacattttataggttttgataggttatattttcattttcattcatctcaacctactttctaatttctctgtgatttcttcttcttctttttagagacagggtcttgctatattgtccaggctggtctcaaactcccggactcaagcagccctcctaccttggcctcccaaagtg s panTro4.chr17 321888 753 + 82630442 ggcacggtggctcacacctgtaatcccagcacttcaggaggccgaggcagacggatcacctgaggtcaggagtttgagaccagcctggccaatatggtgaaaccccgtctctactaaaaa------tacaaaaa--attagccaggcacggtggcgggcacctgtaatcccagctacttgggaggctgaggcaggagaaaggcatgaacccgggaggcggagcttgcagtgagccgagattgtgccactgcact-cagcctgggtgacagagcgagatgctatctcaaaaaaagaaagaaagaagcccattagcagccactccctcccattcctcccttctccacagtccccagaagtcacgaatctactttctatcttattaatttgcataatctggacatttcata-aaacagaatcatataataagtagtattttttattcatgatttctttttttcagctctaatctctatt---atttctttcctcttgcttgctttgggtttagtttgctgttctttttctagtttcttaaggtggaagattatttatttgaagtttttcttcttttttaacataggttcttacagctatacattttataagttttgataggttatattttcattttcattcatctcagactactttctaatttctctgtgat---ttcttcttctttttagagacagggtcttgctatattgtccaggctggtctcaaactcccgggctcaagcagccctcctaccttggcctcccaaagtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 198073 747 + 73212453 ggcgcggtggctcacgcctgtaatcccaacacttcgggaggccgaggcgggtggatcacctgaggttaggagttcgagaccagcctggccaatattgtgaaaa-------atactaaaat------tacaaaaa--cttagccaggtgcggtgacgggcacctgtaatcccagctacttgggaggctgaggcaggagaaaggcatgaacacgggagatggagcttgcagtgagcctagattgcgccactgcactccagcctgggtgacagagcaagacgccgtctcaaaaaaagaaagaaagaagcccattagtagccactccctcccattcctcccttctccccagtccccagaagtcacgaatctactttctgtcttattaatctgcataatctggacatctcatataaacagaatcatataataagcggtcttttttattcatgatttcattTtttcagatctaatctctatt---atttctttccttttgtttgctttgggtttagtttgctgttctttttctagtttcttaaggtggaagattatttatttgaagtttttcttc----ttaacataggttcttacagctatacattttataagttttggtaggttatattttcattttcattcatctcaaactactttctaatttctctgtgatttcttcttcttctttttagagacagggtcttgctatattgtccaggctggtctcaaactcccaggctcaagcagccctcctaccttggccttccaaagtg i ponAbe2.chr17 C 0 I 2123 s rheMac3.chr16 228860 751 + 80904711 ggcgcagcggctcacgtctgtcatcccagcacttccggaggctgaggcgggcggatcac--aaggtcaggagttcgagaccagcctggccaatatggtgaaaccccgtctatactaaaaa------tacaaaaa---ttagccggctgtggggtcagacgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaactcgggaggcagaggttgcagtgagccgagctcgtgccactgccctcctgcctgggtgacagagcgagactccatctcaaaaaaagaaagaaagaggcccattagcagcctctccctcccattcctcccttctccgcagtccccagaagccacgaatctactttctgtcttattattttgcatattctggccatttcatataaatggaatcat---gtaagtagtctttctaattcacaatttcattttttcagcactaatctctattataatgtctttccttttgcttgctttgggtttagtttgctgttctttttctagtttcttaaggtggaagattatttatttgaagtctttcttc-tttttaacataggttcttacagctatacattttataagttttggtaggttatatttgcattttcattcatctcaaactatgttctaatttctctgtgat---ttcctcttctttttagagacggggtcttgctatattgtccaggctggtctcaaactcccgggctcaagcagtcctcccaccttggcctccccaattg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 236903 751 + 80997621 ggcgcagcggctcacgcctgtcatcccagcacttctggaggctgaggcgggcggatcac--aaggtcaggagttcgagaccagcctggccaatatggtgaaaccccgtctatactaaaaa------tacaaaaa---ttagccggctgtggtgtcggacgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaactcgggaggcagaggttgcagtgagctgagctcgtgccactgcactcctgcctgggtgacagagcgagactccgtctcaaaaaaagaaagaaagaggcccattagcagcctctccctcccattcctcccttctccgcagtccccagaagccacgaatctactttctgtcttattattttgcatattctggccatttcatataaatggaatcat---gtaagtggtctttCTGattcacaatttcattttttcagctctaatctctattataatttctttccttttgcttgctttgggtttagtttgctgttctttttctagtttcttaaggtggaagattatttatttgaagtctttcttc-tttttaacataggttcttacagctatacattttataagttttggtaggttatatttgcattttcattcatctcaaactatgttctaatttctctgtgac---ttcctcttctttttagagacggggtcttgctatattgtccaggctggtctcaaactcccgggctcaagcagtcctcccaccttggcctccccaagtg i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1026600 731 - 1291538 ggcacagtgcctcgcgcctgtcatcccagcactgtgggaggccgaggcgggctgaccacctgaggtcaggagttgtagaccagcctggccaaggtggtgaaaccccatctctactaaaaaaaaaactacaaaaaaaattagccggtagtggtggcacacacttgtagtcccagctactccgaaggctaaggcaggagaatcacctgaatcctgaagaaggaggttgt----ggctgagatcacaccactgcactccag-ctgggtgacagagcaagattccatctcaaggaaa-aaaaaaagaagccaattagcagcagctccctcccattccttccttctccacaatcctcggaagccacgtatccattttctgtcttattaatttgcatattctggacattgcctataaacggaatcacagaataagtggtcttttTTATTCACGAGTTCATTTTTTCAG------------tt---atttcttcccttttgcttgctttgggtttagtttgctgtt-tttttcttccacctta--gtggaag---atttatttgaggtctttcttcttttttaacata-gttcttgcagctatacattttataagttttggtaggttgtattttcattttcattcatctcaaagtatttgctaatttctctgtgat------ttcttctttttagagatgaggtcttgctatattgccca----ggtctcaaactcccaggctcaagcagtcctcccaccttggcctcccaaagtg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e nomLeu3.chr19 301064 3632 - 81552678 I a score=15178.000000 s hg38.chr17_GL383563v3_alt 339419 23 + 375691 ctgggattgcaggtgtgagccac s panTro4.chr17 322641 23 + 82630442 ttgagattacaggcatgagccac i panTro4.chr17 C 0 I 969 s rheMac3.chr16 229611 23 + 80904711 ttgcaattacaggcatgagccac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 237654 23 + 80997621 ttgcaattacaggcatgagccac i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1027331 23 - 1291538 ttgagattacaagcatgaagtac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e nomLeu3.chr19 301064 3632 - 81552678 I e ponAbe2.chr17 198820 2123 + 73212453 I a score=1746.000000 s hg38.chr17_GL383563v3_alt 339442 3 + 375691 cac s rheMac3.chr16 229634 3 + 80904711 cac i rheMac3.chr16 C 0 I 2354 s macFas5.chr16 237677 3 + 80997621 cac i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1027354 3 - 1291538 cac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e nomLeu3.chr19 301064 3632 - 81552678 I e ponAbe2.chr17 198820 2123 + 73212453 I e panTro4.chr17 322664 969 + 82630442 I a score=1596.000000 s hg38.chr17_GL383563v3_alt 339445 8 + 375691 gcccagcc s macFas5.chr16 237680 8 + 80997621 acctggcc i macFas5.chr16 C 0 I 2333 s calJac3.chrUn_GL286409 1027357 8 - 1291538 acctggcc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 229637 2354 + 80904711 I e nomLeu3.chr19 301064 3632 - 81552678 I e ponAbe2.chr17 198820 2123 + 73212453 I e panTro4.chr17 322664 969 + 82630442 I a score=42779.000000 s hg38.chr17_GL383563v3_alt 339453 641 + 375691 -------------aacccattggttatttaggagtgtgttcactttggacatttgtgaattcccaaatttcctttattgatatctaacttcattctactacagttagagaacgtactttgtatgacttgaatccttttaaatttattaaggccaggtgcggtggttcatgcctgtaatcctaacactttgagaggccgaggcaggcggatcgcttgaggccaggagtttgagaccagcctggccaacatagcaaaaccccatctcctccaaaaatacaaaacttagctgagcctggtggtgcaaacctgtaatcccagctac--tcaggaggctgaggcatgagaatcacttgcacccaggaggcggaggtt-------gccaagattgcaccgctgcactccagtctgggtaacagagagagacttcatcttaaca--aaaatcagtcaggcgtgaaggcacgtatctgccgtctcagctacttctgggaactgaggtggg-ggactaccagagcctggggggttgaggctgcagtgagccgtgatcatgccactgcactccagcctgggaaacagagcaagaccAGAaaaattaccgagt----cttgttttacggcctaacatatggcctctcccagagaacacctcccgggcacgtgagaagaacg s calJac3.chrUn_GL286409 1027365 666 - 1291538 taatttcttctttgagccattggttatttaagagtgtgtttacttttgacatatatgaattcccaaatttcctttactgatttctaacttcattcaactatagtcagagaacatactttgaatgacttgaatcctttc-agtttattaaggccaggtacagtggttcatgcctgtaatcctaacattttgaaaggccgaggcaggcagatcacttgaggtcaggaattcaagaccagcctggccaacatagcaaaaccctatctctaacaaaaatagaaaacttagccgaacctggtggcatacacctgtaatcccagctactttcacgagtctaaggcacaagaatcacttgatcccacaaggcagaggttgcaatgagccaagatcacgccactgcactccaatctgggtaacagtacaagactctgcctcaaaaagaaaatcagtcaggcatgaaggcacatacctgtagtccaagctgc-tcaggagac--aggtgggaggactaccgaagcctggaaggttgaggctgcagtgagccgtgatcatgccactgcactccacccttgacaacatagcaagaccAGAaaaattactgagtcttgcttgttttatggcctaacatatggcctctcccagagaacgcctcaggggcacttgagaagaatg i calJac3.chrUn_GL286409 C 0 I 2652 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 229637 2354 + 80904711 I e macFas5.chr16 237688 2333 + 80997621 I e nomLeu3.chr19 301064 3632 - 81552678 I e ponAbe2.chr17 198820 2123 + 73212453 I e panTro4.chr17 322664 969 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 340094 445 + 375691 tgcgtcctgtggttgctgggtggcgtgttctgcagatgtctgtcctgccgggcacgtgagaagaacgtgcatcctgcagttgctgggtggagagttctgcagatgtctgtCCTCCCGGgcacttgagaagaacgtgcatcctgcggttgctgggtggagagttctgcagatgtctgtcctcccaggcacttgagaagaacgtgcatgctgtggttgctgggtggagagttctgcagatgtctgtcctcccaggcacttgagaagaacgtgcatgctgtggttgctgggtggagagttctgcagatgtctgtCCTCCCAggcatgtgagaagaacgtgcatcctgcagctgctgggtggcatgttctgcaggtgtctgtcctcccaggcatgtgagaagaacgtgaatgctgcggttgctgggtggagagttctgcagatatctgt e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 229637 2354 + 80904711 I e macFas5.chr16 237688 2333 + 80997621 I e nomLeu3.chr19 301064 3632 - 81552678 I e ponAbe2.chr17 198820 2123 + 73212453 I e panTro4.chr17 322664 969 + 82630442 I a score=78687.000000 s hg38.chr17_GL383563v3_alt 340539 936 + 375691 CCTCCCGGgcacgtgaaaagaacctgcatcctgcgattgctgggtggcgtgttctgcagatgcctgtCCTCCCGGgcacgtgagaagaacgtgcgtcctgcggttgctgggtggagagttctgcagatgtctgtCCTCCCGGgcacgtgaaaagaacctgcatcctgcgattgctgggtggcatgttctgcagatgcctgtCCTCCCGGgcacgtgagaagaacgtgcgtcctgcggttgctgggtggagagttctgcagatgtctgtCCTCCCgggcatgtgagaa---tgtgcatgctgcggttgctgggtggagagttctgcagatgtctgtcttcccgggcacgtgaaaagaacctgcatcctgcgattgctgggtggcgtgttctgcagatgtctgtCCTCCCAGgcacatgaaaagaacgtgcatcctgcggttgctgggtggcgtgttctgcagatgcctgtCCTCCCGGgcacgtgagaagaacctgcatcctgcggttgctgggtggagagttctgcagatgtctgttaggtccagttgatttacagtgttttcaagtctatctcattgttggttctctgcctactcattctatccattattgaaagtgggaccttgaagcttccaacgattattgttggattttgtatttctcccttcatttctgttggttttggttcatgtattttgggggtctcttgttaggtgcatacagctttataattattaggctttcctgataggttgactcctttgtcattataaaatgtccctgtttgtccctagtaacaatttttgccttaaagcctattttgtctgctacttgtggagccacttcaccactctttcggttactgcttgaacggaatatctttttctgtccttttactttacacacatttgtgtctttgaatctaaagtgtgtctcttg s panTro4.chr17 323633 939 + 82630442 cctcccgggcacgtgagaagaacgtgcgtcctgcgattgctgggtggcgtgttctgcagatgtctgtCCTCCCAGgcacgtgaaaagaacctgcatcctgtgattgctgggtggcgtgttctgcagatgcctgtCCTCCCGGgcacgtgagaagaacctgcatcctgcggttgctgggtggagagttctgcagatgtctgtCCTCCCAGgcacgtgagaagaacctgcatcctgcgattgctgggtggcgtgttctgcggatgtctgtCCTCCCAGgcacatgagaagaatgtgcatcctgcggttgctgggtggcgtgttctgcagatgcctgtCCTCCCAGgcacatgagaagaacttgcatcctgcggttgctgggtggagagttctgcagatgtctgtCCTCCtgggcacgtgagaagaacatgcatgctgcggttgctgggtggcgtgttctgcagatgcttgtCCTCTCGGgcacgtgagaagaacgtgagtcctgcggttgctgggtggagagttctgcagatgtctgttaggtccagttgatttacagtgttttcaagtctatttcattgttgcttctctgcctactcattctatccattattgaaagtgggacctcaaagcctccaatggttattgttggattttgtatttctcccttcatttctgttggttttggttcatgtattttgggggtctcttgttaggtgcatacagctttataattattaggctttcctgacaggttgactcctttgtcattataaaatgtccctgtttgtccctagtaacaatttttgccttaaagcctattttgtctgctacttgtggagccacttcacctatctttcggttactgcttgcacagaatatctttttctgtccttttactttacacccatttgtgtctttgaatctaaagtgtgtctcttg i panTro4.chr17 I 969 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 229637 2354 + 80904711 I e macFas5.chr16 237688 2333 + 80997621 I e nomLeu3.chr19 301064 3632 - 81552678 I e ponAbe2.chr17 198820 2123 + 73212453 I a score=238553.000000 s hg38.chr17_GL383563v3_alt 341475 935 + 375691 taaatccgttctgccatgc----tctttttattggagaatttagttcatttgtatttaatgtaattacagataagataggatttatgccattttgctagttgctttccatatgtcttgtctttttattcctatattttcccatttctgccttcttttgtgttgaatacgtattttctagcataacccttaatgctcctcttccattttttaaagttattttcttaatggttgccttggagactacaattaacattttaatttaaaacaatctaacctggactaatactgacctaattgcaatagtacacaaaacctttgctccaacatcgctctgtcccctccactcctttgtgctattattgttatacaaattatatcttggtgcattataagcccatcaacaaagttttaacaagcattgctttccgcagttatcttttcaatcagacagaagaattactagcagaatatactcaccccttt-agatgctccttgtatcgtcatatggatttcagtcaccgcctagtgccctttcatgtcggcctgaaggattctctttaggatttcttataggccatgcctgccagtgacaaattctctctgtttttattatattaatctaggatgtcttaatttctcctttttttttt---ttgagacgcagtctcgctctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcctgggttcacacgattctcctgcctcagcctcctgagcagctgggactacaggcgcccgccaccacacccggctaatttttttttgtatttttagtagagacggggtttcaccatgtttgccaggatggtcttgatctcctgacctcgtgatcccccggcctgggcctcccaaagtgctgggattacaggcatgagccaccacacccggcctc s panTro4.chr17 324572 933 + 82630442 taaatccgttctgccatgc----tctttttattggagaatttagtccatttgtatttaatgtaattacagataagataggatttatgccattttgctagttgctttccatatatcttgtctttttattcctatattttcccatttctgccttcttttgtgttgaataggtattttctagcatcacccttaatgctcctcttccattttttaaagttattttcttaatggttgccttggagactacaattaacattttaatttaaaaccatctaacctggactaatactgacctaattgcaatagtacacaaaacctttgctccaacatcgctctgtcccctccactcctttgtgctattattgttatacaaattatatcttggtgcattataagcccatcaacaaagttttaacaagcattgctttccgcagttatcttttcaatcagacagaagaattactagcagactgtactcaccctttt-agatgctccctgtattgtcatatggatttcagtcaccgcctagtgccctttcatgttggcctgaaggattctctttaggatttcttataggccatgcctgccagtgacaaattctctctgtttttattatattaatctaggatgtcttaatttctcctttttttttt-----gagacacagtcttgctctgtcacccaggctggagtgcagtggcacgatctcggctcactgcaagctccgcctcctgggttcacaccattctcctgcctcagcctcccgagcagctgggactacaggcgccggccaccacacccggctaatttttttttgtatttttagtagagacggggtttcaccatgttcgccaggatggtctcgatctcctgacctcgtgatccccccgcctcggcctcccaaattgctgggattacaggcatgagccaccacacccggcctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 200943 932 + 73212453 taaatccgttctgccatgctctatctttttattggagaatgtagtccatttccatttaatgtaattacagataagataggatttatgccattttgctatttgctttccatatgtcttgtctttttattcctatattttcccatttctgccttgttttgtgttgaataggtattttctagtataacccttaatgctcgtcttccattttttaaagttattttcttaatggttgccttggagactacaattaacattttaatttaaaacaatctaacttggactaatactgacctaattgcaacagtacacaaaaactttgctccaatatcgctctgttccctccactcctttgtgctattattgttacacaaattatatcttggtgcattataagcccgtcaaccaagttttaacaagctttgctttccgcagttatcttttcaatcagacagaagaattactagcagaatatactcacccctttaagatgctccttgtattgtcatgtggagttcagtcaccgcctagtgccctttcatttcagcctgaagaattctctttagtatttcttataggccatgcctgccagtgacaaattctctctgtttttattatattaatctaggatgtcttaatttctcctttttttttttttttgagacacagtctcgctctgtcacccaggctggagtgcagtggtgtgatctcggctcactgcaagctctgcctcccgggttcacaacattct----------cctcctgagcagctgggactacaggcgcccgccaccacacctggctaa-ctttttttgtatttttagtagagacggggtttcatcatgttcgccaggatggtctcgatctcctgacctcgtgatccacccgcctcagcctcccaaagtgctgagattacaggcgtgagccaccgtgcccggcctc i ponAbe2.chr17 I 2123 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 229637 2354 + 80904711 I e macFas5.chr16 237688 2333 + 80997621 I e nomLeu3.chr19 301064 3632 - 81552678 I a score=4873.000000 s hg38.chr17_GL383563v3_alt 342410 20 + 375691 t--------tttgaaggatagttttttg s panTro4.chr17 325505 28 + 82630442 tccttcatttttgaaggatagttttttc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 201875 28 + 73212453 tccttcatttctgaaggatagttttttc i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 240021 19 + 80997621 --------ttttgaaggagagactctc- i macFas5.chr16 I 2333 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e rheMac3.chr16 229637 2354 + 80904711 I e nomLeu3.chr19 301064 3632 - 81552678 I a score=15107.000000 s hg38.chr17_GL383563v3_alt 342430 17 + 375691 tggatatagaattcttt s panTro4.chr17 325533 17 + 82630442 tggatatagaattcttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 201903 17 + 73212453 tggatatagaattcttt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 231991 17 + 80904711 tggatgtagaattcttt i rheMac3.chr16 I 2354 C 0 s macFas5.chr16 240040 17 + 80997621 tggatgtagaattcttt i macFas5.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e papAnu2.chr16 217962 0 + 74645514 C e nomLeu3.chr19 301064 3632 - 81552678 I a score=51753.000000 s hg38.chr17_GL383563v3_alt 342447 41 + 375691 aaagaattttttaaattctttcagcactttggctgtgccac s panTro4.chr17 325550 41 + 82630442 aaagaattttttaaattctttcagcactttggctgtgccac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 201920 41 + 73212453 aaagaattttttaaattctttcagcactttggctgtgccac i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 232008 41 + 80904711 aaagaattgtttaaattatttcagcactttggctgtgccac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240057 41 + 80997621 aaagaattgtttaaattatttcagcactttggctgtgccac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 217962 41 + 74645514 aaaggatttttaaaattctttcagcactttggCTGTGACAC i papAnu2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I e nomLeu3.chr19 301064 3632 - 81552678 I a score=150733.000000 s hg38.chr17_GL383563v3_alt 342488 87 + 375691 ccactgcctcctgctttccagggcttcagatgagaagtcagctgtgctattaatcttcatgagtgttccctgcctcattaacactca s panTro4.chr17 325591 87 + 82630442 ccactgcctcctgctttccagggcttcagatgagaaatcagctgtgctattaatcttcatgagtgttccctgcctcattaacactca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 201961 87 + 73212453 ccactgcctcctgctttccagggcttcagatgagaagtcagctgtGCTATTAATCTTCATGAGTGTTCcctgcctcattaacactca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 304696 85 - 81552678 ccactgcctcctgcttttcagggcttcagatgagaagtcagctgtgctattaatc-tcatgagtgtt-ccTGccttattaacactca i nomLeu3.chr19 I 3632 C 0 s rheMac3.chr16 232049 86 + 80904711 ccagtgcctcctgccgtccagggctttggatgagaagtcagctgtgctattaatc-tcatgagtgttccctgCCTTATTGACactca i rheMac3.chr16 C 0 I 1 s macFas5.chr16 240098 86 + 80997621 ccagtgcctcctgccgtccagggcttcggatgagaagtcagctgtgctattaatc-tcatgagtgttccctgCCTTATTGACactca i macFas5.chr16 C 0 I 1 s papAnu2.chr16 218003 86 + 74645514 CCACTGCCTCCTGCCGTCCAGGGCTTCGGATGAGAAGTCAGCTGTGCTATTAATC-TCATGAGTGTTCCCTGCCTTATTAACACTCG i papAnu2.chr16 C 0 I 1 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I e chlSab2.chr16 205164 1692 + 75148670 I a score=536022.000000 s hg38.chr17_GL383563v3_alt 342575 238 + 375691 ccttcaattctgaattcaaccgtatcttcctccctggcccaggccaggccctttgataccggcacctcgttcctccataattcccctttgtagtgattatcacagttgtaattaaacaattaatgatggacagagctctttcctgtattttcccatcactagaatgtaagttccataaggcaagaagaaccaggcctgccttgttcaccattctgttgcccgaagctgctcaacgcct s panTro4.chr17 325678 238 + 82630442 ccttcaattctgaattcaaccgtatcttcctccctggcccaggccaggccctttgatactggcacctcgttcctccataattcccctttgtagtgactatcacagttgtaattaaacaattaatgatggacagagctctttcctgtattttctcgtcactagaatgtaagttccataaggcaagaagaaccaggcctgccttgttcactattctgttgcccgaagctgctcaacgcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202048 235 + 73212453 ccttcaattctgaattcaaccgtatcttcctccctaacccaggccaggccctttgataccggcacctcgttcctctataattcccctttgtagtgattatcacagttgtaattaaacaattaatgatggacagagctctttcctgtattttcccatcactagaatgtaagttccataaggc---aagaaccaggcctgccttgttcaccattctgtcgcccgaagccactcgatgcct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 304781 235 - 81552678 ccttcaattctgaattcaaccatatcttcctccctggcccaggccaggccctttgataccggcacctcgttcctctataattcccctttgtagtgattatcacagttgtaatcaaacaattaatgatggacagagctctttcctgtattttcccatcactagaatgtaagttccataaggc---aagaaccaggcctgtcttgttcaccattctgtcacccaaagctgcccgatgcct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232136 233 + 80904711 ccttcaattctgagttcaaccgtatcttcctccctggcctaggccaggccctttgataccggcactccattcctctggaattcccctttgtagtgattatcaccgttgtaattcaacaattaatgatggacagagctctttcctgtattttcccaccactacaatgtaagttgcataagg----aagaaccaagcctgtcttgttcactactctgtccccagaagccac-caatgcct i rheMac3.chr16 I 1 C 0 s macFas5.chr16 240185 233 + 80997621 ccttcaattctgagttcaaccgtatcttcctccctggcctaggccaggccctttgataccggcactccattcctctggaattcccctttgtagtgattatcaccgttgtaattcaacaattaatgatggacagagctctttcctgtattttcccaccactacaatgtaagttgcataagg----aagaaccaagcctgtcttgttcactactctgtccccagaagccac-caatgcct i macFas5.chr16 I 1 C 0 s papAnu2.chr16 218090 234 + 74645514 CCTTCAATTCTGAGTTCAACCGTATCTTCCTGCCTGGCCTAGGCCAGGCCCTTTGATACCGGCACTCCATTCCTCTGGAATTCCCCTTTGTAGTGATTATCACCGTTGTAATTCAACAATTAATGATGGACAGAGCTCTTTCCTGTATTTTCCcaccactagaatgtaagttgcATAAGG----AAGAACCAAGCCTGTCTTGTTCACTACTCTGTCCCCAGAAGCCACTCAATGCCT i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 206856 234 + 75148670 CCTTCAATTCTGAGTTCAACCGTATCTTCCTCCCTGGCCTAGGCCAGGCCCTTTGACACCGGCACTCCATTCCTCTGGAattcccctttgtagtgatcatcaccgttgtaattcaacaattaatgatggacggagctctttcctgtactttcccatcactagaatgtaagttccatacgg----aagaaccaagcctgtgttgttcaccactctgtccccagaagccacccaatgcct i chlSab2.chr16 I 1692 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1028031 2652 - 1291538 I a score=657445.000000 s hg38.chr17_GL383563v3_alt 342813 253 + 375691 ggcacactatgaactctcaataaatatttactgagcgaacgaCTGACACTCATCCTAGAGTAGGCTACATGACTGGTCTCAGCTTCTCACTCCCTGCAGTGGTGT-AAACAGCCACACCATGCCAGGGCCTACAAGTAGGCAGTGTACATCCCTGCCCTGTG--TTGAGGTTGGCTGTGAGCCTTGTGTTAGCTAATGGGATGTTAGTGAATATGATGTGAAAAAAGGCTGGAAATGTACATGTACGATTGAGCTG s panTro4.chr17 325916 253 + 82630442 ggcacactgtaaactctcaataaatatttactgagcgaacgaCTGACACTCATCCTAGAGTAGGCTACATGACTGGTCTCAGTTTCTCACTCCCTGCAGTGGTGT-AAACAGCCACACCATGCCAGGGCCTACAAGTAGGCAGTGTACATCCCTGCCCTGTG--TTGAGGTTGGCTGTGAGCCTTGTGTTAGCTAATGGGATGTTAGTGAATATGATGTGAAAAAAGGCTGGAAATGTGCGTGTACGATTGAGCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202283 252 + 73212453 ggcacactgtaaactctcaataaatatttactgagtgaacgaatGACACTCATCCTAGAGTGGGCTACATGACTGGTCTCAGCTTCTCATTCCCTGCAGTGGCGT--AACAGCCACACCGTGCCAGGGCCTACAAGTAGGCAGTGTACGTCCCTGCCCTGTG--Ttgaggttggccgtgtaccttgtgttacctaatgggatgttagtgaatatgatgtgaaaaaaggctggaaatgtgcttgtacgattgagctg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305016 253 - 81552678 ggtacactgtaaactctcaataaatatttactgagcgaacgaatGACACTCATCCTGGAGTAGGCTACATGACTGGTCTCAGCTTCTCACTCCCTGCAGTGGTGT-AAACAGCCACGCCGTGCCAGGACCTCCAAGTAGGCAGTGTATGTCCCTGCCCTGTG--TTGAGGTTGGCCGCACGCCTTGTGTTAGCTAATGGGATGTTAGTGAATATGACGTGAAAAAAGGCTGGAAATGTGTGTGTATGATTCAGCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232369 253 + 80904711 ggcacactgtaaactctcaataaacatttactgagtgaacgaatGAAACGCATCCGAGAGTAGCCCACATGACGGGTCTGAGCTTCTCACTCCCTGTAGTGGTGT-AAACAGCCACACCACGCCAGGGCCTGCAAGTAGACAGTGTACGTCCCTGGCCTGTG--TTGAGGTTGGCCGTGTGCCTTGTGTTAGCGAACGGGATGTTAGTGAACATGATGTGAGAAAACACTGAAAACCTGTGTGTACAATTGAGCTG i rheMac3.chr16 C 0 I 1 s macFas5.chr16 240418 249 + 80997621 ggcacactgtaaactctcaataaacatttactgagtgaacgaatGAAACGCATCC--GAGTAGCCCACATGACGGGTCTCAGCTTCTCACTGCCTGTACTGGTGT-AAACAGCCACACCACGCCAGGGCCTGCAAGTAGACAGTGTACGTCCCTGGCCTGTG--TTGAGGTTGGCCGTGTGCCTTGTGTTAGCGAACGGGATGTTAGTGAACATGATGTGAGAAAAGGCTGAAAAC--GTGTGTACAATTGAGCTG i macFas5.chr16 C 0 I 6 s papAnu2.chr16 218324 253 + 74645514 GGTACACTGTAAACtctcagtaaacatttactgagtgaacGAACGAAACGCATCCGAGAGTAGCCCACATGACGGGTCTCAGCTTCTCACTCCCTGTAGTGCTGT-AAACAGCCACACCACGCCACGGCCTGCAAGTAGACAGTGTACGTCCCTGGCCTGTG--TTGAGGTTGGCCGTGTGCCTTGTGTTAGCTAATGGGATGTTAGTGAACATGATGTGAGAGAAGGCTGAAAACATGTGTGTACGATTGAGCTG i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 207090 252 + 75148670 ggcacactgtaaa-tctcaataaacatttactgagtgaatgaatGAAACTCATCCGAGAGTAGGTTACATGACGGGTCTCAGCTTCTCACACCCTGCAGTGGTGT-AAACAGCCACACCACGCCAGGGCCTACAAGTAGGCAGTGTACGTCCCTGGCCTGTG--TTGAGGTTGGCCGTGTGCCTTGTGTTAGCTAATGGGATGTTAGTGAACATGATGTGAGAAAAGGCTGAAAACATGTGTGTATGATTGAACTG i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 1030683 254 - 1291538 GGTGCCCTGTAAACTCTCAATAAATACCTATGGAGTAAATGAAGGAAATGTGTTCTGAAGCAGGCTACGTGCCCAGTCTCAGCTTCTCACT-CCTGTAACAGTATTAAACAGCCACCCC-TGCCACTCCCTGCAAGTGGGCAGCATGCGTCCCTGCCCTGtgacttgagcttggtcgtgtgactggggatagctaatgggatgtgagggaacatggtgtgaggaaaggcttgaaatgtgcgagtaccatcgagctg i calJac3.chrUn_GL286409 I 2652 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I a score=650.000000 s hg38.chr17_GL383563v3_alt 343066 1 + 375691 G s panTro4.chr17 326169 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202535 1 + 73212453 g i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305269 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232623 1 + 80904711 A i rheMac3.chr16 I 1 C 0 s papAnu2.chr16 218578 1 + 74645514 A i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 207343 1 + 75148670 A i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 1030937 1 - 1291538 g i calJac3.chrUn_GL286409 C 0 I 1 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e macFas5.chr16 240667 6 + 80997621 I a score=-4412.000000 s hg38.chr17_GL383563v3_alt 343067 2 + 375691 TC s panTro4.chr17 326170 2 + 82630442 TC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202536 2 + 73212453 tt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305270 2 - 81552678 TT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232624 1 + 80904711 T- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 218579 1 + 74645514 G- i papAnu2.chr16 C 0 I 3 s chlSab2.chr16 207344 1 + 75148670 T- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e macFas5.chr16 240667 6 + 80997621 I a score=1471.000000 s hg38.chr17_GL383563v3_alt 343069 4 + 375691 CTCA s panTro4.chr17 326172 4 + 82630442 CTCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202538 4 + 73212453 ctcA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305272 4 - 81552678 CTCA i nomLeu3.chr19 C 0 T 3 s rheMac3.chr16 232625 3 + 80904711 CTC- i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 207345 3 + 75148670 CTC- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e papAnu2.chr16 218580 3 + 74645514 I e macFas5.chr16 240667 6 + 80997621 I a score=59821.000000 s hg38.chr17_GL383563v3_alt 343073 44 + 375691 CTGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGG s panTro4.chr17 326176 44 + 82630442 CTGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 232628 44 + 80904711 TTGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240673 44 + 80997621 TTGTGCTCCTCCTGTCACCATGAGACAGAGCAGGCCTTGGGTGG i macFas5.chr16 I 6 C 0 s papAnu2.chr16 218583 44 + 74645514 TTGTGCTCCTCCTGTCACCATGAGACAGAGCAGGCCTTGGGTGG i papAnu2.chr16 I 3 C 0 s chlSab2.chr16 207348 44 + 75148670 TTGTGCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e nomLeu3.chr19 305276 3 - 81552678 T e ponAbe2.chr17 202542 0 + 73212453 C a score=13428.000000 s hg38.chr17_GL383563v3_alt 343117 9 + 375691 TCTCTGTGC s panTro4.chr17 326220 9 + 82630442 TCTCTGTGC i panTro4.chr17 C 0 I 427 s nomLeu3.chr19 305273 9 - 81552678 TCACTGTGC i nomLeu3.chr19 T 3 C 0 s rheMac3.chr16 232672 9 + 80904711 TCTCTGTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240717 9 + 80997621 CCTCTGTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218627 9 + 74645514 TCTCTGTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207392 9 + 75148670 TCTCTGTGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=67738.000000 s hg38.chr17_GL383563v3_alt 343126 40 + 375691 TCCTCCCGTCACCATGAGACAGAACAGGCCTTGGGTGGTC s panTro4.chr17 326656 40 + 82630442 TCCTCCCGTCACCATGAGACAGAACACGCCTTGGGTGGTC i panTro4.chr17 I 427 C 0 s nomLeu3.chr19 305282 40 - 81552678 TCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGCGGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232681 40 + 80904711 TCCTCCTGTCACCACGAAACCAAACAGGCCTTGGGTGGTC i rheMac3.chr16 C 0 T 95 s macFas5.chr16 240726 40 + 80997621 TCCTCCTGTCACCACGAAACCAAACAGGCCTTGGGTGGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218636 40 + 74645514 TCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTGGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207401 40 + 75148670 TCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGATGGTC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=5853.000000 s hg38.chr17_GL383563v3_alt 343166 6 + 375691 TCTTGT s panTro4.chr17 326696 6 + 82630442 TCTTGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305322 6 - 81552678 TCTGGT i nomLeu3.chr19 C 0 T 48 s rheMac3.chr16 232626 6 + 80904711 TCTTGT i rheMac3.chr16 T 95 C 0 s macFas5.chr16 240766 5 + 80997621 -TCTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218676 5 + 74645514 -TCTGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207441 5 + 75148670 -TCTGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=70424.000000 s hg38.chr17_GL383563v3_alt 343172 40 + 375691 GCTCCTCCCGTCACCATGAGACAGAACAGGCCTTGGGTGG s panTro4.chr17 326702 40 + 82630442 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305280 40 - 81552678 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGCGG i nomLeu3.chr19 T 48 C 0 s rheMac3.chr16 232632 40 + 80904711 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGG i rheMac3.chr16 C 0 T 48 s macFas5.chr16 240771 40 + 80997621 CCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218681 40 + 74645514 CCTCCTCCTGTCACCACGAAACCAAACAGGCCTTGGGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207446 40 + 75148670 CCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=555.000000 s hg38.chr17_GL383563v3_alt 343212 5 + 375691 TCTC-T s panTro4.chr17 326742 5 + 82630442 TCTC-T i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305320 5 - 81552678 TCTC-T i nomLeu3.chr19 C 0 T 48 s rheMac3.chr16 232624 5 + 80904711 TCTCT- i rheMac3.chr16 T 48 C 0 s macFas5.chr16 240811 4 + 80997621 TCTC-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218721 4 + 74645514 TCTC-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207486 4 + 75148670 TCTC-- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=73483.000000 s hg38.chr17_GL383563v3_alt 343217 42 + 375691 TGTGCTCCTCCCGTCACCATGAGACAGAACAGGCCTTGGGTG s panTro4.chr17 326747 42 + 82630442 TGTGCTTCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305277 42 - 81552678 TGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGCG i nomLeu3.chr19 T 48 C 0 s rheMac3.chr16 232629 42 + 80904711 TGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240815 42 + 80997621 TGTCCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTG i macFas5.chr16 C 0 T 189 s papAnu2.chr16 218725 42 + 74645514 TGTCCTCCTCCTGTCACCACGAAACCAAACAGGCCTTGAGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207490 42 + 75148670 TGTGCCCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=1314.000000 s hg38.chr17_GL383563v3_alt 343259 1 + 375691 G s panTro4.chr17 326789 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305319 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232671 1 + 80904711 G i rheMac3.chr16 C 0 T 48 s macFas5.chr16 240668 1 + 80997621 A i macFas5.chr16 T 189 C 0 s papAnu2.chr16 218767 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207532 1 + 75148670 G i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=4632.000000 s hg38.chr17_GL383563v3_alt 343260 5 + 375691 TCTCT s panTro4.chr17 326790 5 + 82630442 TCTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305320 5 - 81552678 TCTCT i nomLeu3.chr19 C 0 T 48 s rheMac3.chr16 232624 5 + 80904711 TCTCT i rheMac3.chr16 T 48 C 0 s macFas5.chr16 240669 5 + 80997621 TCTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218768 4 + 74645514 TCTC- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207533 4 + 75148670 TCTC- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=40117.000000 s hg38.chr17_GL383563v3_alt 343265 22 + 375691 TGTGCTCCTCCCGTCACCATGA s panTro4.chr17 326795 22 + 82630442 TGTGCTCCTCCTGTCACCATGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305277 22 - 81552678 TGTGCTCCTCCTGTCACCATGA i nomLeu3.chr19 T 48 C 0 s rheMac3.chr16 232629 22 + 80904711 TGTGCTCCTCCTGTCACCATGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240674 22 + 80997621 TGTGCTCCTCCTGTCACCATGA i macFas5.chr16 C 0 I 161 s papAnu2.chr16 218772 22 + 74645514 TGTCCTCCTCCTGTCACCACGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207537 22 + 75148670 TGTCCTCCTCCTGTCACCACGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=36984.000000 s hg38.chr17_GL383563v3_alt 343287 21 + 375691 GACAGAACAGGCCTTGGGTGG s panTro4.chr17 326817 21 + 82630442 GACAGAACAGGCCTTGGGTGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305299 21 - 81552678 GACAGAACAGGCCTTGGGCGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232651 21 + 80904711 GACAGAACAGGCCTTGGGTGG i rheMac3.chr16 C 0 T 48 s macFas5.chr16 240857 21 + 80997621 GACAGAACAGGCCTTGGGTGG i macFas5.chr16 I 161 C 0 s papAnu2.chr16 218794 21 + 74645514 AACCAAACAGGCTTTGGGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207559 21 + 75148670 GAAAGAACAGGCCTTGGGTGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=1911.000000 s hg38.chr17_GL383563v3_alt 343308 1 + 375691 T s panTro4.chr17 326838 1 + 82630442 T i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305320 1 - 81552678 T i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232624 1 + 80904711 T i rheMac3.chr16 T 48 C 0 s macFas5.chr16 240878 1 + 80997621 T i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218815 1 + 74645514 T i papAnu2.chr16 C 0 T 236 s chlSab2.chr16 207580 1 + 75148670 T i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=6738.000000 s hg38.chr17_GL383563v3_alt 343309 4 + 375691 CTCT s panTro4.chr17 326839 4 + 82630442 CTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305321 4 - 81552678 CTCT i nomLeu3.chr19 C 0 T 48 s rheMac3.chr16 232625 4 + 80904711 CTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240879 4 + 80997621 CACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218580 4 + 74645514 CTCT i papAnu2.chr16 T 236 C 0 s chlSab2.chr16 207581 4 + 75148670 CTCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=-845.000000 s hg38.chr17_GL383563v3_alt 343313 3 + 375691 TGT s panTro4.chr17 326843 2 + 82630442 -GT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305277 3 - 81552678 TGT i nomLeu3.chr19 T 48 C 0 s rheMac3.chr16 232629 3 + 80904711 TGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240883 3 + 80997621 GGT i macFas5.chr16 C 0 T 209 s papAnu2.chr16 218584 3 + 74645514 TGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207585 2 + 75148670 GT- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=72199.000000 s hg38.chr17_GL383563v3_alt 343316 38 + 375691 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGT s panTro4.chr17 326845 38 + 82630442 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305280 38 - 81552678 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232632 38 + 80904711 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240677 38 + 80997621 GCTCCTCCTGTCACCATGAGACAGAGCAGGCCTTGGGT i macFas5.chr16 T 209 T 48 s papAnu2.chr16 218587 38 + 74645514 GCTCCTCCTGTCACCATGAGACAGAGCAGGCCTTGGGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207587 38 + 75148670 CCTCCTCCTGTCACCATGAGAAAGAACAGGCCTTGGGT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=2100.000000 s hg38.chr17_GL383563v3_alt 343354 1 + 375691 G s panTro4.chr17 326883 1 + 82630442 G i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305318 1 - 81552678 G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232670 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240667 1 + 80997621 G i macFas5.chr16 T 48 C 0 s papAnu2.chr16 218625 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207625 1 + 75148670 G i chlSab2.chr16 C 0 T 235 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=9414.000000 s hg38.chr17_GL383563v3_alt 343355 9 + 375691 GTCTCTTGT s panTro4.chr17 326884 9 + 82630442 GTCTCTTGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305319 9 - 81552678 GTCTCTGGT i nomLeu3.chr19 C 0 T 48 s rheMac3.chr16 232671 8 + 80904711 GTCTC-TGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240668 9 + 80997621 ATCTCTTGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218626 8 + 74645514 GTCTC-TGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207391 8 + 75148670 GTCTC-TGT i chlSab2.chr16 T 235 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=72635.000000 s hg38.chr17_GL383563v3_alt 343364 42 + 375691 GCTCCTCCCGTCACCATGAGACAGAACAGGCCTTGGGTGGTC s panTro4.chr17 326893 42 + 82630442 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305280 42 - 81552678 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGCGGTC i nomLeu3.chr19 T 48 C 0 s rheMac3.chr16 232679 42 + 80904711 CCTCCTCCTGTCACCACGAAACCAAACAGGCCTTGGGTGGTC i rheMac3.chr16 C 0 T 95 s macFas5.chr16 240677 42 + 80997621 GCTCCTCCTGTCACCATGAGACAGAGCAGGCCTTGGGTGGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218634 42 + 74645514 CCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTGGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207399 42 + 75148670 GCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGATGGTC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=-2574.000000 s hg38.chr17_GL383563v3_alt 343406 3 + 375691 -TCT s panTro4.chr17 326935 3 + 82630442 -TCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305322 3 - 81552678 -TCT i nomLeu3.chr19 C 0 T 48 s rheMac3.chr16 232626 3 + 80904711 TCT- i rheMac3.chr16 T 95 C 0 s macFas5.chr16 240719 2 + 80997621 -TC- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218676 2 + 74645514 -TC- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207441 2 + 75148670 -TC- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=79809.000000 s hg38.chr17_GL383563v3_alt 343409 51 + 375691 TGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGGTCTCTTGT s panTro4.chr17 326938 51 + 82630442 TGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGGTCTCTTGT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305277 51 - 81552678 TGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGCGGTCTCTGGT i nomLeu3.chr19 T 48 T 48 s rheMac3.chr16 232629 50 + 80904711 TGTGCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGGTCTCTGT- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240721 50 + 80997621 TGTCCTCCTCCTGTCACCACGAAACCAAACAGGCCTTGGGTGGCCTCTGT- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218678 50 + 74645514 TGTCCTCCTCCTGTCACCACGAAACCAAACAGGCCTTGGGTGGTCTCTGT- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207443 50 + 75148670 TGTCCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTGGTCTCTGT- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=67840.000000 s hg38.chr17_GL383563v3_alt 343460 40 + 375691 GCTCCTCCTATCACCATGAGACAGAACAGGCCTTGGGTGG s panTro4.chr17 326989 40 + 82630442 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305280 40 - 81552678 GCTCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGCGG i nomLeu3.chr19 T 48 C 0 s rheMac3.chr16 232679 40 + 80904711 CCTCCTCCTGTCACCACGAAACCAAACAGGCCTTGGGTGG i rheMac3.chr16 C 0 T 95 s macFas5.chr16 240771 40 + 80997621 CCTCCTCCTGTCACCACGAGAAAGAACAGGCCTTGGGTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218728 40 + 74645514 CCTCCTCCTGTCACCACGAAACCAAACAGGCCTTGAGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207493 40 + 75148670 GCCCCTCCTGTCACCATGAGACAGAACAGGCCTTGGGTGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e calJac3.chrUn_GL286409 1030938 1 - 1291538 I e ponAbe2.chr17 202542 0 + 73212453 C a score=-1501.000000 s hg38.chr17_GL383563v3_alt 343500 5 + 375691 TCTC-T- s panTro4.chr17 327029 5 + 82630442 TCTC-T- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305320 5 - 81552678 TCTC-T- i nomLeu3.chr19 C 0 T 48 s rheMac3.chr16 232624 5 + 80904711 TCTCT-- i rheMac3.chr16 T 95 C 0 s macFas5.chr16 240811 4 + 80997621 TCTC--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218768 4 + 74645514 TCTC--- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207533 4 + 75148670 TCTC--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1030939 5 - 1291538 tctc--c i calJac3.chrUn_GL286409 I 1 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e ponAbe2.chr17 202542 0 + 73212453 C a score=87251.000000 s hg38.chr17_GL383563v3_alt 343505 40 + 375691 TGTGCTCCT-CCTATCACCATGAGACAGAACAGGCCTTGGG s panTro4.chr17 327034 40 + 82630442 TGTGCTCCT-CCTGTCACCATGAGACAGAACAGGCCTTGGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305277 40 - 81552678 TGTGCTCCT-CCTGTCACCATGAGACAGAACAGGCCTTGGG i nomLeu3.chr19 T 48 C 0 s rheMac3.chr16 232629 40 + 80904711 TGTGCTCCT-CCTGTCACCATGAGACAGAACAGGCCTTGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240815 40 + 80997621 TGTCCTCCT-CCTGTCACCACGAGAAAGAACAGGCCTTGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218772 40 + 74645514 TGTCCTCCT-CCTGTCACCACGAAACCAAACAGGCTTTGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207537 40 + 75148670 TGTCCTCCT-CCTGTCACCACGAGAAAGAACAGGCCTTGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1030944 41 - 1291538 tgTGTACCTGCCTATCACCATGAGACAAAGCAGGCCTTGGG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e canFam3.chr9 15777074 2535 - 61074082 I e ponAbe2.chr17 202542 0 + 73212453 C a score=7700.000000 s hg38.chr17_GL383563v3_alt 343545 3 + 375691 TGG s panTro4.chr17 327074 3 + 82630442 TGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305317 3 - 81552678 CGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 232669 3 + 80904711 TGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240855 3 + 80997621 TGG i macFas5.chr16 C 0 T 47 s papAnu2.chr16 218812 3 + 74645514 TGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207577 3 + 75148670 TGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1030985 3 - 1291538 TGG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15779609 3 - 61074082 tgc i canFam3.chr9 I 2535 C 0 e mm10.chr11 75947960 4950 + 122082543 I e ponAbe2.chr17 202542 0 + 73212453 C a score=8208.000000 s hg38.chr17_GL383563v3_alt 343548 3 + 375691 TCT s panTro4.chr17 327077 3 + 82630442 TCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305320 3 - 81552678 TCT i nomLeu3.chr19 C 0 T 47 s rheMac3.chr16 232672 3 + 80904711 TCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240811 3 + 80997621 TCT i macFas5.chr16 T 47 C 0 s papAnu2.chr16 218815 3 + 74645514 TCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207580 3 + 75148670 TCT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1030988 2 - 1291538 -CC i calJac3.chrUn_GL286409 C 0 T 47 s canFam3.chr9 15779612 3 - 61074082 tct i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e ponAbe2.chr17 202542 0 + 73212453 C a score=72515.000000 s hg38.chr17_GL383563v3_alt 343551 23 + 375691 -CTGTGCTCCT-CCTGTCACCATGA s panTro4.chr17 327080 23 + 82630442 -CTGTGCTCCT-CCTGTCACCATGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202542 23 + 73212453 -CTGTGCTCCT-CCTGTCACCATGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305276 23 - 81552678 -CTGTGCTCCT-CCTGTCACCATGA i nomLeu3.chr19 T 47 C 0 s rheMac3.chr16 232675 23 + 80904711 -CTGTCCTCCT-CCTGTCACCACGA i rheMac3.chr16 C 0 I 475 s macFas5.chr16 240814 23 + 80997621 -CTGTCCTCCT-CCTGTCACCACGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218818 23 + 74645514 -CTGTCCTCCT-CCTGTCACCACGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207583 23 + 75148670 -CTGTCCTCCT-CCTGTCACCATGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1030943 24 - 1291538 -ctgTGTACCTGCCTATCACCATGA i calJac3.chrUn_GL286409 T 47 C 0 s canFam3.chr9 15779615 25 - 61074082 cttgTACTCCTGACTATCATCATGC i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I a score=-540.000000 s hg38.chr17_GL383563v3_alt 343574 1 + 375691 -G s panTro4.chr17 327103 1 + 82630442 -G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202565 1 + 73212453 -G i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305299 1 - 81552678 -G i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 233173 1 + 80904711 -G i rheMac3.chr16 I 475 C 0 s macFas5.chr16 240837 1 + 80997621 -G i macFas5.chr16 C 0 I 20 s papAnu2.chr16 218841 1 + 74645514 -G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207606 1 + 75148670 -G i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1030967 1 - 1291538 -G i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15779640 1 - 61074082 C- i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I a score=4095.000000 s hg38.chr17_GL383563v3_alt 343575 1 + 375691 A s panTro4.chr17 327104 1 + 82630442 A i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202566 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305300 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 233174 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240858 1 + 80997621 A i macFas5.chr16 I 20 C 0 s papAnu2.chr16 218842 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207607 1 + 75148670 A i chlSab2.chr16 C 0 I 20 s calJac3.chrUn_GL286409 1030968 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15779641 1 - 61074082 A i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I a score=1864823.000000 s hg38.chr17_GL383563v3_alt 343576 613 + 375691 -CAGAACAGGCCTTGGGTGGTCTCTGGTCCAAATGGGATCAGAGACACATGGAACAGACCTAAACCCA-CTTGGAGCTTGAAGTCAGCCAAGTCCTCCTGCGGGCAGCCTAGGTCAGCCAAACCTCACCCAACTCCGAGCTACGTGAGAGGGAAATAAATGCTCACTGTCATATGCCAGTGGGTTT-GGGGCAGCTTGTTGCATCCCAATATGGTGGCAATCGATGGCTAAGACATATGCCCCTGTGAGTCTGAAGGCTGGGAGTGAGTGCTGGCGAAGGT-------------CTTCATGTGGCCCACAATTGGGTCCAGATGAGTTCCATAGGCAGATCCACCAGCCTCCTCTGTACTTACAGAATAAAGTTCCCAGAATCCTACAGTCCCGCAAC--------TCATCTCTGGTGCCAGCAGCTCCTGGAGTAGCCCAGAGtgtactaagcgcggagtaccatgccaggcacacagtaggcgctTTGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCCCCCTCACCAATTCCACCACTGGGCCTGAGTT--CATCTGCACAGAT--GAAAATCTGCAG-TTCTTCCTCCGTTGTGGGGCTGGACTGG--CGGGGGCAGGGGGAGGCACCCTCACCTGTCCC s panTro4.chr17 327105 613 + 82630442 -CAGAACAGGCCTTGGGTGGTCTCTGGTCCAAATGGGATCAGAGACACATGGAACAGACCTAAACCCA-CTTGCAGCTTGAAGTCAGCCAGGTCCTCCTGCGGGCAGCCTAGGTCAGCCAAACCTCACCCAACTCCGAGCTACGTGAGAGGGAAATAAATGCTCACTGTCATATGCCAGTGGGTTT-GGGGCAGCTTGTTGCACCCCAATATGGTGGCAATCGATGGCTAGGACATATGCCCCTGTGAGTCTGAAGGCTGGGAGTGAGTGCTGGGGAAGGT-------------CTTCATGTGGCCCACAATTGGGTCCAGATGAGTTCCATAGGCAGATCCACCAGCCTCCTCTGTACTTACAGAATAAAGTTCCCAGAATCCTACAGTCCCACCAC--------TCATCTCTGGTGCCAGCAGCTCCTGGAGTAGCCCAGAGtgtactaagcgcggagtaccatgccaggcacacagtaggcgctTTGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCCCCCTCACCAATTCCACCACTGGGCCTGAGTT--CATCCGCACAGAC--GAAAATCTGCAG-TTCTTCCTCCATTGTGGGGCTGGACTGG--GGGGGGCGGGGGGAGGCACCCTCACCTGTCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 202567 611 + 73212453 -CAGAACAGACTTTGGGTGGTCTCTGGTCCAAATGGGATCAGAGACACATGGAACAGACCTAAACCCA-CTTGCGGCTTGAAGTCAGCCAAGTCCTCCTGCCGGCAGCCTAGGTCAGCCAAACCTCACCCAACTCCGAGATATGTGAGAGGGAAATAAATGCTCACTGTCATATGCCAGTGGGTTT-GGGGCGGCTTGTTGCACCACAATATGGTGGCAATTGATGGCTAAGACATATGCCCTCGTGAGTCTGAAGGCTGG----GAGTGCTGGGGAAGGT-------------CTTCATGTGGCCCACAATTGGGTCCAGATTAGTTCCATCGGCAGATCCACCAGCCTCCTCCGTACTTACAGAATAAAGTTCCCAGAATCCTACAGTCCCACAAC--------TCATCTCTGGTGCCAGCAGCTCCTGGAGTAGCCCAGAGTGTACTAAGCATGGAGTACCATGCCAGGCACACAGTAGGCGCTTTGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCCCCCTCACCAATTCCACCACTGGGCCTGAGTT--CATCTGCACAGCC--AAAAATCTGCAG-TTCTTCCTCCGTTGTGGGGCTGGACTGGGTGGGAGGCGGGGGGAGGCACCCTCACCTGTCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 305301 606 - 81552678 -CAGAACAGGCCTTGGGCGGTCTCTGGTCCAAATGGGATCAGAGACACATGGAACAGACCTAAACCCA-CTTGCAGCTTGAAGTCAGCCAAGTCCTCCTGTGGGCAGCCTAGGTcggccaaacctcacccaactccgagatacgtgagagggaaataaatgctcactgtcataggccagtgggttt-ggggtgggttgttgcaccacaataTGGTGGCAATCGATGGCTAAGACATATGTCCTTG-GAGTCTGAA-GCTGGGAGTGAGTGCTGGGGAAGGT-------------CTTCGTGTGGCCCACAATTAGGTCCAGATTAGTTCCACAGGCAGATCCACCAGCCTCGTCCGTACTTACAGAATAAAGTTCCCCGAATCCTACAGTCCCACAAC--------TCATCTCTGGTGCCAGCAGCTCCTAGAGTAGCCCAGAGTGTACTCAGCGTGGAGTACCATGCCAGG--CACAGTAGGCACTTTGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCCTCCTCACCAATTCCACCACTGGGCCTGAGTT--CATCTGCACAGCC--GAAAATCTGCAG-TTCTTCCTCCGCTGTGGGGCTGGACTGG-----GGGCGGGGGGCGGCACCCTCACCTGTCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 233175 609 + 80904711 -CAGAACAGGCCTTGGGTGGTCACCGGTCCAAGTGGGATTAGAGACACATGGAACAGATCTAAACCCAGCTTGCAGCTTGAAGCCAGCCAAGTCCTCCTGAGGGCAGCTTAGGTCGGCCAAACCTCACCCAACCCCCAGATACATGACAGGGAAATAAACGCTCAGTGCCATATCCCAGTGGGTTTGGGGGCAGCCTGTTGCACCACGATCTGGTGGCAATGGGTGACTGAGACATATGCCCCTGTGGGTCTGAAGGCCGGGAGCGAGTGCT-GGGAAGGT-------------CTTCGCGTGG-CCACAACTGGGTCCAGATTAGTTCCGCAGGCAGATCCGCCGGCCTCCTCCGTACTCACAGAATAAACTTCCCAGAATCCCACAGTCCCACAGT--------TCATCTCTGGGGCCAGCAGCTCCTAGAGTGGCCCCGAgtgtgctaagcacagagtacagcgccaggcacacagtaggtactTTGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCTCCCTCACCAGTTCCACCACTGGGCCTGAGTT--CATCCGCACAGCC--AAACACCTGCGG-TTCTTCCTCCACTGTGGGGCTGAGGAGG--GGGGCGCGAG----TGCACCCTCACCTGTCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 240859 609 + 80997621 -CAGAACAGGCCTTGGGTGGTCACTGGTCCAAGTGGGATTAGAGACACATGGAACAGATCTAAACCCAGCTTGCAGCTTGAAGCCAGCCAAGTCCTCCTGAGGGCAGCTTAGGTCGGCCAAACCTCACCCAACCCCCAGATACATGACAGGGAAATAAACGCTCAGTGCCATATCCCAGTGGGTTTGGGGGCAGCCTGTTGCACCACGATCTGGTGGCAATGGGTGACTGAGACATATGCCCTTGTGGGTCTGAAGGCCGGGAGCGAGTGCT-GGGAAGGT-------------CTTCGCGTGG-CCACAACTGGGTCCAGATTAGTTCCGCAGGCAGATCCGCCGGCCTCCTCCGTACTCACAGAATAAACTTCCCAGAATCCCACAGTCCCACAGT--------TCATCTCTGGGGCCAGCAGCTCCTAGAGTGGCCCCGAgtgtgctaagcacagagtacagcgccaggcacacagtaggtactTTGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCTCCCTCACCAGTTCCACCACTGGGCCTGAGTT--CATCTGCACAGCC--AAACACCTGCGG-TTCTTCCTCCACTGTGGGGCTGAGGAGG--GGGGCGCGAG----TGCACCCTCACCTGTCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 218843 611 + 74645514 -AAGAACAGGCCTTGGGTGGTCACTGGTCCAAGTGGGATTAGAGACACATGGAACAGATCTAAACCCAGCTTGCAGCTTGAAGCCAGCCAAGTTCTCCTGAGGGCAGCTTAGGTCGGCCAAACCTCACCCAACCCCCAGATACATGAGAGGGAAATAAATGCTCAGTGCCATATCCCAGTGGGTTTGGGGGCAGCCTGTTGCACCACGATATGGTGGCAATAGGTGACTAAGACATATGCCCTTGTGAGTCTGAAGGCTGGGAGTGAGTGCTGGGGAAGGT-------------CTTCACGTGGCCCACAATTGGGTCCAGATTAGTTCCACAGGCAGATCCATCGGCCTCCTCCGTACTTACAGGATAAACTTCCCAGAATCCCACAGTCCCACAGT--------TCATCTCTGGGGCCAGCAGCTCCTGGAGTGGCGCAGAGTGTGCTAAGCACAGAGTACAGcgccaggcacacagtaggtactttGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCTCCCTCACCAGTTCCACCACTGGGCCTGAGTT--CATCTGCACAGCC--AAACACCTGCGG-TTCTTCCTCCACTGTGGGGCTGAGGAGG--GGGGCGCGAG----TGCACCCTCACCTGTCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 207628 611 + 75148670 -CAGAACAGGCCTTGGGTGGCCAATGGTCCAAGTGGGATTAGAGACACATGGAACAGATCTAAGCCCAGCCTGCAGCTTGAAGCCAGCCAAGCCCTCCTGAGGGCAGCCTAGGGCGGCCAAACCTCACCCAACCCCCAGACACATGAGAGGGAAATAAATGCTCAGTGCCACATCCCAGTGGGTTTGGGGGCAGCCTGTTGCACCACAATATGGTGGCAACGGATGACTAAGACATATGCCCTTGTGAGTCTGAAGGCTGGGAGTGAGAGCTGGGGAAGGT-------------CTTCACGTGGCCCACAACTGGGTCCAGATTAGTTCCACAGGCAGATCCATCGGCCTCCTCCGTACTTACAGAATAAACTTCCCAGAATCCTACAGTCCCACAGT--------TCATCTCTGGGGCCAGCAGCTCCTAGAGTGGCCCAGAgtgtgctaagcacggagtacagcaccaggcacacagtaggtactTTGCTGAGTTAGGCTTTGTCCTTCTCCACCTTCTCCCTCACCAGTTCCACCACTGGGCCTGAGTT--CATCTGCACAGCC--AAACACCTGCAG-TTCTTCCTCCACTGTGGGGCTGAGGAGG--GGGGCGCGAG----TGCACCCCCACCTGTCCC i chlSab2.chr16 I 20 C 0 s calJac3.chrUn_GL286409 1030969 607 - 1291538 -CAAAGCAGGCCTTGGGTGGCCACTGGTCCAAGTGGGATCGGA-ACACATAGAACAGACATAAATCCAACTTGAAGCTTGAGGCCACCCACATCCTACTGAGGGCGGCCTAGAccagcc-aacctcacccaactcccaggtacgagagagtgaagtaaatgctcactgccatatgccagtgggttt-ggggtggtttgttacaccacaataTGGTGGCAATTGACAACTAAGACACAGGCCCTTGTGAGTCC-AAGGCTTGGACTGAGTCCTGGGGAAGGTCTTACATGTGGTCCTTCATGTGGCCCAC-ACTGCATCCAGATTAATTCTGTGGGCAGATACACCTGCCTCCTCCACACTTAAAAAATAAACTTCCCAGAATCCTACAGTCCCACGAT--------TCATCTCCGGTGCCGGCTAC----AGAGTAGCccagtgggtactaagcactgagtacagtgccaggcacacagcaggtgc-tTGCTGAGTCAGGCTTTGTCCTTCTCCACCTTCCCCCTCACCAATTCCACCACTGGACCTGAGTT--CATCTGCACAGCC--GAAAACCTGCAG-TTCTTCCTCTGCTGTGGGGCTGAGGAGG--GGG-----------TGCACCCTCACCTGCCAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15779642 620 - 61074082 CAATTATATGACTT-GGTGGTCACTGGTCCAAGTGGGATAAGAGACACACAGAACATATCTAAACCCAACTCCCAGCTTGAAGCCAA-CGAGTTCCACTGAGAGCAGCTTAGGTcagccaaatctcacccaacctgaagatacgtgag-gaggaataaatacttattgccatatgccggtgggttttggggtggtttgttatgcagcaatgttgtggcaagagatgactgagacaTATGCCTTGGCAAGTTTGAAGAACACTAGGAAGTCCTGGGGAAGATCTTCCATCTGGTCCTTCATATGGCCCATGATTGGGTCCAAACCAATTCTAT-GGTAGATCTGCACCCCTCCTCCAGACTTACAGGATGAACTCCTTAGAATTCTACAATCCCACCACTGGGATAATTATCCCTAGTAGCAGCA--TCCTGAAGAAGCCCAGAGTGGGTTAGGTACCT-GCATGCTGCCAGGCA-ACAG-AAGTGC-TTGATGAGTTCACCTTTGTCCTCCTGCACCCACCCTATCACCAG--CCTCCAAGAGGCCTGAGTGCACATATTCATGGCCAGAAAAATCTGGGATTTTTTTCTCTGCAGTGGGGTTGGGGAGG--GAGG----------TCTACCTTAACCTGTCCC i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I a score=116453.000000 s hg38.chr17_GL383563v3_alt 344189 51 + 375691 AGGAGCTAACCCTGCTTACTGCCTCAA-TGACA-CCCAGACTCAAGTGACGAG s panTro4.chr17 327718 51 + 82630442 AGGAGCTAACCCTTCTTACTGCCTCAA-TGACA-CCCAGACTCAAGTGACGAG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305907 51 - 81552678 AGGAGCTGACCCTTCTTACTGCCTCAG-TGACA-CCCAGACTCAGGTGACGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 233784 50 + 80904711 AGGAGCTGA--CTTCTCACTGCCTCAA-TGACACCCCAGACTCAGGTGATGAG i rheMac3.chr16 C 0 I 1869 s macFas5.chr16 241468 50 + 80997621 AGGAGCTGA--CTTCTCACTGCCTCAA-TGACACCCCAGACTCAGGTGATGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 219454 50 + 74645514 AGGAGCTGA--CTTCTCACTGCCTCAA-TGACACCCCAGACTCAGGTGACAAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 208239 52 + 75148670 AGGAGCTGACCCTTCTCACTGCCTCAA-TGACACCCCAGACTCAGGTGACGAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1031576 51 - 1291538 AGGAGCTGACCCTTCTTTATGCCTCAA-TGACACTTCAGACTCAGGTGACAG- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15780262 53 - 61074082 AGGGACTGACCTTTCTTAAAGCCTTAACTAATCCCCCAAACTCAGGTAAAGAG i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e ponAbe2.chr17 203178 0 + 73212453 C a score=894.000000 s hg38.chr17_GL383563v3_alt 344240 2 + 375691 -GC s panTro4.chr17 327769 2 + 82630442 -GC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305958 2 - 81552678 -GC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 241518 2 + 80997621 -GC i macFas5.chr16 C 0 I 1878 s papAnu2.chr16 219504 2 + 74645514 -GC i papAnu2.chr16 C 0 I 1874 s chlSab2.chr16 208291 2 + 75148670 -GC i chlSab2.chr16 C 0 I 1887 s calJac3.chrUn_GL286409 1031627 2 - 1291538 -GT i calJac3.chrUn_GL286409 C 0 I 1799 s canFam3.chr9 15780315 2 - 61074082 AG- i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e rheMac3.chr16 233834 1869 + 80904711 I e ponAbe2.chr17 203178 0 + 73212453 C a score=2468.000000 s hg38.chr17_GL383563v3_alt 344242 2 + 375691 -GA s panTro4.chr17 327771 2 + 82630442 -GA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305960 2 - 81552678 -GA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 235703 2 + 80904711 -GA i rheMac3.chr16 I 1869 C 0 s macFas5.chr16 243398 2 + 80997621 -GA i macFas5.chr16 I 1878 C 0 s papAnu2.chr16 221380 2 + 74645514 -GA i papAnu2.chr16 I 1874 C 0 s chlSab2.chr16 210180 2 + 75148670 -GA i chlSab2.chr16 I 1887 C 0 s calJac3.chrUn_GL286409 1033428 2 - 1291538 -GA i calJac3.chrUn_GL286409 I 1799 C 0 s canFam3.chr9 15780317 2 - 61074082 TG- i canFam3.chr9 C 0 C 0 e mm10.chr11 75947960 4950 + 122082543 I e ponAbe2.chr17 203178 0 + 73212453 C a score=50796.000000 s hg38.chr17_GL383563v3_alt 344244 16 + 375691 GCCTGGGCCCTGGACA s panTro4.chr17 327773 16 + 82630442 GCCTGGGCCCTGGACA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305962 16 - 81552678 GCCTGGGCCCTGGACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 235705 16 + 80904711 GCCCGGGCCCTGGACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 243400 16 + 80997621 GCCCGGGCCCTGGACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 221382 16 + 74645514 GCCCGGGCCCTGGACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 210182 16 + 75148670 GCCCGGGCCCTGGACA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1033430 16 - 1291538 GCCTGTGCTCTGGACA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75952910 16 + 122082543 GCCTCGGCTCTGGACA i mm10.chr11 I 4950 C 0 s canFam3.chr9 15780319 16 - 61074082 GGCAGGGACACAGGCA i canFam3.chr9 C 0 I 1146 e ponAbe2.chr17 203178 0 + 73212453 C a score=2662.000000 s hg38.chr17_GL383563v3_alt 344260 3 + 375691 CCA s panTro4.chr17 327789 3 + 82630442 CCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305978 3 - 81552678 TCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 235721 3 + 80904711 CCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 243416 3 + 80997621 CCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 221398 3 + 74645514 CCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 210198 3 + 75148670 CCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1033446 2 - 1291538 CC- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75952926 3 + 122082543 TCA i mm10.chr11 C 0 C 0 e canFam3.chr9 15780335 1146 - 61074082 I e ponAbe2.chr17 203178 0 + 73212453 C a score=190447.000000 s hg38.chr17_GL383563v3_alt 344263 64 + 375691 GGTCTGTGCAAAGTGAGGTCACCCCGCAGGTGAGTCCTGGCTGCCCCCTTGGCCTGTCCTTTCT s panTro4.chr17 327792 64 + 82630442 GGTCTGTGCAAAGTGAGGTCACCCCACAGGTGAGTCCTGGCTGCCCCCTTGGCCTGTCCTTTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 305981 64 - 81552678 GGTCTGTGCAAAGTGAGGTCACCCCACAGGTGAGTCCTGGCTGCCCCCTTGGCCTGTCCTTTCT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 235724 64 + 80904711 GGTCTGTGCAAAGTGAGGTCACCCCGTAGGTGAGTCCTGGCTGCCCCCTTGGCCTGTCCTttct i rheMac3.chr16 C 0 I 322 s macFas5.chr16 243419 64 + 80997621 GGTCTGTGAAAAGTGAGGTCACCCCGTAGGTGAGTCCTGGCTGCCCCCTTGGCCTGTCCtttct i macFas5.chr16 C 0 I 320 s papAnu2.chr16 221401 64 + 74645514 GGTCTGTGCAAAGTGAGGTCACCCCACAGGTGAGTCCTGGCTGCCCCCTTGGCCtgtcctttct i papAnu2.chr16 C 0 I 332 s chlSab2.chr16 210201 64 + 75148670 GGTCTGTGCAAAGTGAGGTCACCCCACAGGTGAGTCCTGGCTGCCCCCTTGGCCTGTCCTttct i chlSab2.chr16 C 0 I 322 s calJac3.chrUn_GL286409 1033448 54 - 1291538 ----------AAGCGAGGTCATCCCATGGTGGAGTCCTGGCTTCCCCCTCGGCCTGTCCATTCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75952929 61 + 122082543 GGTCCTCAAAGTGTAGGGTCGG-CAGCAGTTACACCCTAGCTGTCCC--TGGCCTATTCTTTCT i mm10.chr11 C 0 C 0 s canFam3.chr9 15781481 64 - 61074082 GGCCTGCACAAAGTGAGCCCAGCCCACAGTAGAGTTCCAGCTGCTCTGTTGGCCTGTCCTCTCT i canFam3.chr9 I 1146 C 0 e ponAbe2.chr17 203178 0 + 73212453 C a score=135824.000000 s hg38.chr17_GL383563v3_alt 344327 56 + 375691 ACTCTGA-CTTGGAGCATGACCCTGATGGAAATTTTCAGTTCCGTAAAGGAAATTTT------ s panTro4.chr17 327856 56 + 82630442 ACTCTGA-CTTGGAGCATGACCCTGATGGAAATTTTCAATTCCGTAAAGGAAATTTT------ i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 306045 56 - 81552678 ACTCTGA-CTTGGGGCGTGACCCTGATGGAAATTTTCAATTCCGTAAAGGAAATTTT------ i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 236110 57 + 80904711 ACTCTGACCTTGGACCATGACCCTGATGGAAACTTTCAATTCTGTAAAGGAAATTTC------ i rheMac3.chr16 I 322 C 0 s macFas5.chr16 243803 57 + 80997621 ACTCTGACCTTGGAGCATGACCCTGATGGAAACTTTCAATTCCGTAAAGGAAATTTC------ i macFas5.chr16 I 320 C 0 s papAnu2.chr16 221797 57 + 74645514 ACTCTGACCTTGGAGCGTGACCCTCACGGAAATTTTCAATTCCATAAAGGAAGTTTC------ i papAnu2.chr16 I 332 C 0 s chlSab2.chr16 210587 57 + 75148670 ACTCTGACCTTGGAGCGTGACCCTGACGGAAATTTTCAATTCCATAAAGGAAGTTTC------ i chlSab2.chr16 I 322 C 0 s calJac3.chrUn_GL286409 1033502 56 - 1291538 ACTCTGACCTTGAAGCATGACCTTGATGGAAATTTTCAATTCCAT-AAGGAAACTGT------ i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75952990 57 + 122082543 ACACTGACCTCTCTGTGAAAGCTGGATGAGGACTTTCAAGTCTGCAATGGCAGCTGC------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15781545 61 - 61074082 GCCATGACCT--GAGAGTGACCTAGATGCAAAGTATCAGTTCTGTGAAGGCAACTGAGATttt i canFam3.chr9 C 0 I 184 e ponAbe2.chr17 203178 0 + 73212453 C a score=81808.000000 s hg38.chr17_GL383563v3_alt 344383 28 + 375691 GATTCGATATAGGGCCTTTTTACTCCCA s panTro4.chr17 327912 28 + 82630442 GATTCGATATAGGGCCTTTTTACTCCCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 306101 28 - 81552678 GATTCGATATGGGGCCTTTTTACTCCCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 236167 28 + 80904711 GATTCGATATAGGGCCTTTTTACTCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 243860 28 + 80997621 GATTCGATATAGGGCCTTTTTACTCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 221854 28 + 74645514 GATTCGATATAGGGCCTTTTTACTCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 210644 28 + 75148670 GATTCGATATAGGGCCTTTTTACTCCCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1033558 25 - 1291538 GATTCGATATAGAACCTTTTCACTC--- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75953047 28 + 122082543 AATTTCCTCTGGAACCTTTAAATTCCCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15781790 28 - 61074082 GATTCCACACAGGGCCTGCTTATTTCCC i canFam3.chr9 I 184 C 0 e ponAbe2.chr17 203178 0 + 73212453 C a score=605617.000000 s hg38.chr17_GL383563v3_alt 344411 197 + 375691 AGTTTCCCCCTTTGCTAAAT------TAGT-TCCCAATCCCTCTGCCAAG--GGTG-ACTCTGTTCACCCTCTGATGCTGAAACCTGAAGAGGGGTTTGTGAGGAGTCTGAggccagcccagccctcacggtgcttctgtgcaggatcagaagaggtgcccctcatg-gcggcacttgtcttccacctggttaaaaagcaccataata s panTro4.chr17 327940 197 + 82630442 AGTTTCCCCCTTTGCTGAAT------TAGT-TCCCAATCCCTCTGTCAAG--GGTG-ACTCTGTTCACCCTCTGATGCTGAAACCTGAAGAGGGGTTTGTGAGGAGTCTGAGGCCAGCCCAGCCCTCACGGTGCTTCTGCGCAGGATCAGAAGAGGTGCCCCTCATG-GAGGCACTTGTCTTCCACCTGGTTAAAAAGCACCTTAGTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 203178 197 + 73212453 AGTTTCCCCCTTTGCTAAAT------TAGT-TCCCAATCCCTCTGTCAAG--GGTG-ACTGTGTTCACCATCTGATGCTGAAACCTGAAGAGGGGTTTGTGGGGAGTCTGAggccagcccagccctcacggtgcttctgtgcaggatcagaagaggtgcccctcgtg-gaggcacttgtcttccacctggttaaaaagcaccataata i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 306129 197 - 81552678 AGTTTCCCCCTTTGCTAAAT------TAGT-TCCCAATCCCTCTGTCAAG--GGTG-ACTCTGTTCATCACCTGATGCTGAAACCTGAACTGGGGTTTGTGGGGAGTCTGAggccagcccagccctcgcggtgcttctgtgcaggatcagaagaggtgcccctcgtg-gaggcactggtcttccacctggttaaaaagcaccataata i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 236195 197 + 80904711 AGTTTCCCCTTCTGCTAAAT------TAGT-TCCCAGTCCCTCTGTCAAG--GGTG-ACTCCGTTCGCCATCTGACGCTGAGACCTGAAGAGGGGTTTGTGGGGAGTCTGAGGCCAGCCCGGCCCGCATGGTGCTTGTGTGCAGGATCAGAAGAGGTGCCCCTCGTC-CGGGCACTTGTCTTCCACCAGGTTAGAAAGCACCGAAATA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 243888 197 + 80997621 AGTTTCCCCTTCTGCTAAAT------TAGT-TCCCAGTCCCTCTGTCAAG--GGTG-ACTCCGTTCGCCATCTGACGCTGAGACCTGAAGAGGGGTTTGTGGGGAGTCTGAGGCCAGCCCGGCCCGCATGGTGCTTGTGTGCAGGATCAGAAGAGGTGCCCCTCGTC-CGGGCACTTGTCTTCCACCAGGTTAGAAAGCACCGAAATA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 221882 197 + 74645514 AGTTTCCCCTTCTGCTAAAT------TAGT-TCCCAGTCCCTCTGTCAAG--GGTG-ACTCCGTTCGCCATCTGACGCTGAGACCTGAAGAGGGGTTTGtggggagtctgaggccagcCCGGCCCGCATGGTGCTTGTGTGCAGGATCAGAAGAGGTGCCCCTTGTC-CAGGCACTTGTCTTCCACCTGGTTAGAAAGCACCGTAATA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 210672 197 + 75148670 AGATTCCCCTTCTGCTAAAT------TAGT-TCCCAGTCCCTCTGTCAAG--GGTG-ACTCTATTCGCCATCGGACACTGAGACCTGAAGAGCGGTTTGTGGGGAGTCTGAggccagcccggcccgcatggtgcttgtgtgcaggatcagaagaggtgcccctcgtc-caggcacttgtcttccacctggttagaaagcaccgtaata i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1033583 143 - 1291538 ----------------------------------------------------------------TCACCATCTGACACTGACACCTGAAGAGGGATTTGTGGGGAGTCTGAGGCCAGCCCAGCCCACATGGTGCTTCTGTGCCAGGTCAGAAGAGGTGCCCCTCATG-GAGGCACTGGTCTTTCACCTGGTTAAAGAGCACTGCCATA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75953075 199 + 122082543 GCTATTCTAATTTGCTAAATTATCAGTATT-TCTGGATCCATCTAACAAT--GATG-ACTCACTTTTCC--TTGACACCAGAACCTGAGGATGAAGTCA-GGGAAGTCTAAGGCTAGCCCAGCCCACAGGACACTTCTGCAAACAACCATAAAGGATGTTTCT-ATG-GGTACATCTCCTCGCCAGCAACTTAGAAACCATAGTAATA i mm10.chr11 C 0 I 1724 s canFam3.chr9 15781818 200 - 61074082 AGCTCTTGCCTTTGCAAAGG------TATTCCCCCCATCACCCTGTCAAGGTGATGAACCCAGTTCACCACACAACCC--AAACCTAAAGACAGGGTTATGGGAAGTCTGAggccatcacggcccatgacatacttttctgtggaatcagaggaggttcctttcatcagagatgcttatcttccacctgtttaaaaaggattgtagta i canFam3.chr9 C 0 C 0 a score=16011.000000 s hg38.chr17_GL383563v3_alt 344608 4 + 375691 aaCC s panTro4.chr17 328137 4 + 82630442 AACC i panTro4.chr17 C 0 I 248 s ponAbe2.chr17 203375 4 + 73212453 aaCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 306326 4 - 81552678 aaCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 236392 4 + 80904711 AACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 244085 4 + 80997621 AACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 222079 4 + 74645514 AACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 210869 4 + 75148670 aacc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1033726 4 - 1291538 AACC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15782018 4 - 61074082 aaCT i canFam3.chr9 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I a score=28422.000000 s hg38.chr17_GL383563v3_alt 344612 19 + 375691 AATAATGTTAATTC---------------CATTC s ponAbe2.chr17 203379 19 + 73212453 AATAATGTTAATTC---------------CATTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 306330 19 - 81552678 AGTAATGTTAATTC---------------CATTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 236396 19 + 80904711 AACAATGTTAACTC---------------CATTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 244089 19 + 80997621 AACAATGTTAACTC---------------CATTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 222083 19 + 74645514 AACAACGTTAACTC---------------CATTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 210873 19 + 75148670 aacaaTGTTAACTC---------------CATTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1033730 32 - 1291538 AATCACGTCAAAACAAGATGCCTC--ATGCATTC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15782022 34 - 61074082 GCTAATATGAAAAcgagatgcttcctatccattt i canFam3.chr9 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I e panTro4.chr17 328141 248 + 82630442 I a score=404128.000000 s hg38.chr17_GL383563v3_alt 344631 121 + 375691 ATTAGAAAGTTAC--CAACAAACCACACAAAAAG----CTCCTTCTA------------------------------------------GGCAGACCCACCACATCCAGAACTACCTGCAGCTCTCGCCGAGCAAGACGCTCAAAGC-----AGTTACCTCCTCAGCAGTATCC s panTro4.chr17 328389 162 + 82630442 ATTAGAAAGTT-C--CAACAAACCACACAAAAAG----CTCCTTCTAGGCAGCGTCCTCATGGGACGCTCAACCAGCAAAAATGAGTCTGGCAGACCCACCACATCCAGAACTACCTGCAGCTCTCGCCGAGCAAGACGCTCAAAGC-----AGTTACCTCCTCAGCAGTATCC i panTro4.chr17 I 248 C 0 s ponAbe2.chr17 203398 163 + 73212453 ATTAGAAAGTTAC--CAACAAACTGCACAAAAAG----CTCCTTCTAGGCAGCGTCCTCGTGGGACGCTCAACCTGCAAAAATGAGTCTGGCAGACCCACCACATCCAGAACTATCTGCAGCTCTCGCCAAGCAAGACGCTCAAAGC-----AGTTACCTCCTCAGCAGTATCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 306349 163 - 81552678 ATCAGAAAGTTAC--CAACAAACCACACAAAAAG----CTCCTTCCAGGCAGCATCCTCGTGGGACGCTCAACCTGTAAAAATGAGTCTGGCAGACCCACCACATCCAGAACTACCTGCAGCTCTCGCCGAGCAAGACGCTCAAAGC-----AGTTACCTACTCAGCAGTATCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 236415 159 + 80904711 ACTAGAAAGTTAC--CAACAAACCACAGGAACGG----CTCCTTCGACGCAGCGTCCTTGTGGGATGCTCCACCTGCCAAAATGAGTCTGGCAGACGCACCACACCCAGAACGACCTGCAGCTCTCGCCCAGCGGGACGCTCAAAGC---------ACCTACTCGGCAGTCTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 244108 159 + 80997621 ACTAGAAAGTTAC--CAACAAACCACAGGAACGG----CTCCTTCTACGCAGCGTCCTTGTGGGATGCTCCACCTGCCAAAATGAGTCTGGCAGACGCACCACACCCAGAACGACCTGCAGCTCTCGCCCAGCAGGACGCTCAAAGC---------ACCTACTCAGCAGTCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 222102 159 + 74645514 ACTAGAAAGTTAC--CAGCAAACCACAGGAACGG----CTCCTTCTACGCAGTGTCCTTGTGGGATGCTCCGCCTGCCAAAATGAGTCTGGCAGACGCACCACATCCAGAACGACCTGCAGCTCTCGCCCAGCAGGACACTCAAAGC---------ACCTACTCAGCAGTCTCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 210892 159 + 75148670 ACTAGAAAGTCAC--CAACAAACCACAGGAACGG----CTCCTTCTACGCAGTGTCCTCGTGGGATGCTCCGCCTGCCAAAATGAGTCTGGCAGACGCACCACCTCCAGAACCACCTGCAGCTCTCGCCCAGCAGGACGCTCAAAGC---------ACCTACTCAGCAGTCTCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1033762 139 - 1291538 GTCAGAAAGCTGC--CAACGAATGCCACAAAA------CTCCTTCCATGCGGTGTCCTCGTGGGACCCTCAGCATGCAGAAATGAGCCTGGCAGAGCCACCACATCCA-------------------CCGAGCACGACACTCAAGGC------ATCCCCTGCTCAGCAGCG--A i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15782056 173 - 61074082 gttagaaaatcgctttcataaaccacataaattgaagccctcttctgtgtggtgcccttgtatgatgctcaacttgcaaaaA-AAGCCTGGCAAACCCACCATGCTCACAGCCACCTGCAGCTCTGGCCAAGTGAGACACTCCAAGCAGCTGAGTGACCTGCTCGGCAGCACCC i canFam3.chr9 C 0 I 21 e mm10.chr11 75953274 1724 + 122082543 I a score=1692247.000000 s hg38.chr17_GL383563v3_alt 344752 649 + 375691 CCACGATAGACCgctgtggtctgaatgtttgcgac-ccgcgaaagctcccgtattgaaaccctaacaccccaaggcatgaggaggcggggcctttaggaggtgattaggtcgtatgggcaaggtcctcataaatgggattagtgttcttgtaaaaggggcTTTTctaccccttaagattaaggtgttataaaacccaaagggagggaCTCaaaccactgttgccaaatgatgactgagacagtgttagatctaacttgaccgactccgtcttgctcctaacctccaagctgcccttgttcattcctgggcgtaggctgaactaactttaggagaaacttagttt-------atagtttatagtttaaacaaagacggtaacagccctttcccaaagcagacctccttcttccccggggactag--tctgcctttgtaggactaactttagccccaagattagaaattatggtttagcagtcatgcagctggaggctacaagattctgaccctccc-tagctgctcctaagatcagcgcttg-agatattttggaaaccctgcacttgatggatcagctggcaccacccagatcaataaactggctcatctgatcttgaggtccccacccaggaactgaccgagcacaagaagacagctttg s panTro4.chr17 328551 647 + 82630442 CCGCGATAGACCActgtggtctgaatgtttgcgac-ccccgaaagcccccgtattgaaaccctaacaccccaaggtatgaggaggtagggcctttgggaggtgattaggtcgtatgggcaaggtcctcataaatgggattagtgttcttgtaaaaggggcTTTTctaccccttaagattaaggtgttataaaacccaaagggagggaCTCaaaccactgttgccaaattatgactgagacagtgttagatctaacttgaccgactccgtcttgcttctcacctccaagctgcccttgttcattcccgggcataggctgaactaactttaggagaaacttagttt-------atagtttatagtttaaacaaagacggtaacagccctt-cccaaagcagacctccttcttccctggggactag--tctgcctttgtaggactaactttagccccaagattagaaattatggtttagc-gtcatgcagctggaggctacaagattctgaccctccc-taactgctcctaagatcagcgcttg-agatattttggaaaccctgcacttgacggatcagctggcaccacccagatcaataaactggctcatctgatcttgaggtccccaccaaggaactgactgagcacaagaagacagctttg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 203561 649 + 73212453 CCGCGATAGGCCgccgtggtctgaatgttcgcgac-ccccgaaacctcacgtattgaaaccctaacaccccaaggtatgaggaggtggggcctttgggaggtgattaggtcgtatgggcaaggtcctcataaatgggattagtgttcttgtaaaaggggcTTTTctaccccttaagattaaggtgttacaaaaccgaaagggagggaCTCaaaccacttttgcaaaattatgactgagacagcgaaagatctaacttaactgactccatcttgctcctaacctccaagctgtccttgttcattcctgggtgtaggctgcactaactttaggagaaacttagttt-------atagtttatagtttaaacaaagatggtaacagccctttcccaaagcagacctccttcttccctgggcactag--tctgcctttgcaggactaactttagccccaagattagaaattatggtttaggagtcatgcagctggaggctacaagattctgaccctccc-taactgctcctaagatcagcgcctg-agatattttggaaaccctgcacttgatggatcagctgacaccacccacatcgataaactggctcatctgatcttgaggtccccacccaggaactgactgagcgcaagaagacagctttg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 306512 631 - 81552678 CCGCGATAGACCgctgtggcctgaatgtttgcgac-ccctgaaatctcccgtattgaaaccccaacaccccaaggtatgaggaggtggggcctttgggaggtgattaggtcttatgggcaaggtcctcataaatgggattggtgttcctgtaaaaCGGGCTTTTctaccccttaagattaaggtgttataaaacccaaagggagggaCTCaaaccacttttgcaaaatt----ctgagacagtgaaaggtctaacttgaccgactccgtcttgcttctaacctccaagctgtccttgttcattcctgggcgtaggctgaactaactttaggagaaac-------------------ttatagtttaaacaaagatggcaacagccctttcccaaa-caaacctccttcttccctggggactag--tctgcctttgcaggactaactttagccccaagattagaaattatggtttaggagccatgtagctggaggctacaagagtctgaccctccc-taactgctcctaagatcagcgcttg-agatattttggaaaccttgcactttatggatcagctgacaccacccacatcgataaactggctcatctgatcttgaggtccccacccaggaaccgagtgagcacaa-cagacagctttg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 236574 636 + 80904711 CTGCGACAGACCgctgtggtctgaatgcttgccac-ccccggaaacagccatattgaa--------accccaaggtattaggaggtggggcctttgggaggtgattaggtcttatgggcaaggtcctcatacatgggattcgtgttcttgtaaaaggggcTTTTctaccccttaagatccaggtgttataaaacccacagggagggaCTCaaaccacttttgcaaaattatgactgagacggtgaaagatctaacttaaccaactccgtcttgctcctaacctccaagctgtccctgttctttcctgggcgtaggctgaactaactttaggagaaacttagttt--------------ctagtttaaacaaagacggtaacagcccttaaccaaagcagacctccttcttccctggggactagactctgcctttgcaggactaactttagccccaagattggaaattacggtttaggagtcacgcagctggaggctgcaagattctgaccctcct-aagctgcccctaagaccagcgctcg-agacattttgcagaacctgcgcctgacggaccagctggcaccacccagatcaataaaatgactcatctgatcttgaggttcccacccaggaactgactgagctcaacaagagagcttcg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 244267 636 + 80997621 CTGCGACAGACCgctgtggtctgaatgcttgccac-ccccggaaacagccatattgaa--------accccaaggtattaggaggtggggcctttgggaggtgattaggtcttatgggcaaggtcctcataaatgggattcgtgttcttgtaaaaggggcTTTTctaccccttaagatccaggtgttataaaacccacagggagggaCTCaaaccacttttgcaaaattatgactgagacggtgaaagatctaacttaaccaactccgtcttgctcctaacctccaagctgtccctgttctttcctgggcgtaggctgaactaactttaggagaaacttacttt--------------atagtttaaacaaagacggtaacagcccttaaccaaagcagacctccttcttccctggggactagactctgcctttgcaggactaactttagccccaagattggaaattacggtttaggagtcacgcagctggaggctgcaagattctgaccctcct-aagctgcccctaagaccagcgctcg-agacattttgcagaacctgcgcctgacggaccagctggcaccacccagatcaataaaatgactcatctgatcttgaggttcccacccaggaactgactgagctcaacaagagagctttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 222261 643 + 74645514 CTGCGACAGACCGCTGTGGTCTGAATGCTTGCCAC-CCCCGGAAACAGCCATATTGAA--------ACCCCaaggtattaggaggtggggcctttgggaggtgattaggtcttgTGGGCAAGGTCCTCATAAATGGGATTCGTGTTCTTGTAAAAGGGGCTTTTCTACCCCTCAAGATTTAGGTGTTATAAAACCCACAGGGAGGGACTCAAACCacttttgcaaaattatgactgagacggTGGAAGATCTAACTTAACCGACTCCGTCTTGCtcctaacctccaagctgtccttgttctttcctgggcgtaggctgaactaactttaggagaaacttagttt-------atagttcaTAGTTTAAACAAAGACGGTAACAGCCCTTaaccaaagcagacctccttcttccCTGGGGACTAGactctgcctttgcaggactaacttTAGCCccaagattagaaattacggtTTAGGAGTCACgcagctggaggctgcaagattctGACCTTCCT-AAGCTGCCCCTAAGACCAGCGCTTG-AGACATTTTGCAGAACCTGAGCCTGacggatcagctggcaccacccagatcaataaaatGACTCATCTGATCTTGAGGttcccacccaggaactgactgagCTCAACAAGAGCGCTTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 211051 643 + 75148670 CTGCGACAGGCCgctgcggtctgaatgcttgccac-ccccggaaacagccatgctgaa--------accccaaggtattaggaggtggggcctttgggaggtgattaggtcttatgggcaaggtcctcataaatgggatgcgtgttcttgtaaaaggggcTTTTCTACCCCTTAAGATCCAGGTATTACAAAACCCACAGGGAGGGACTCaaaccacttttgcaaaattatgactgagacggtgaaagatctaacttaaccgactccgtcttgctcctaacctccaggctgtcctcgttctttcctgggcgtaggctgaactaactttaggagaaacttagttt-------atagttcatagtttaaacaaagacggtaacagcccttaaccaaagcggacctccttcttccctggggactagactctgcctctgcaggactcactttagccccgagattagaaattacgggttaggtgtcacacagctggaggctgcaagattctgaccctcct-aagctgctcctaagaccagcgctcg-agacattttacagaacctgcgcctgacggatcagctggcaccacccagatcaataaaatgactcatctgatcttgaggttcccacccaggaaatgactgagctcaagacgacagctttg i chlSab2.chr16 C 0 I 945 s calJac3.chrUn_GL286409 1033901 641 - 1291538 CTGAGACAGACCgctatggttggaatgcttgcgatgccccaaaaactccggtactgaaaccctaacacccccaaggaattagaggtggggcctctgggaggtgtttagatcctaggggcaaggccctcataaatggg-tcagtgttcttgtaaaaggg--TGCTATAAAACCTAACACTAAGGTGCTATAAAACCCAGAGGGAGGGACtgaaatcacctttgcaaaattatgactggaaccatgaaagcactaacttaactgactccatcttgctcctcacctccaaggtgtccttggtcattcctgggtgtgggctg----aactttgagagaaacctagtttatcatttataatttatagtttaaacaaagacagtaac-gccctttcccacggcagacctc---cctgactggggactag--acagccttggtaggataagcgttagccacaagactggaagtgatgctctgggagtcacacagctggaggccccaagagtctgaccctccctaaactgctcctaagatcagtacaaacagatgttttgcagaccctgcacttcatggaccagatggcacc-cccagatc----aaccggctcatctgagcttgtggtccccacccaggaactgac--agtgaaaaaagacagctctg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I e canFam3.chr9 15782229 21 - 61074082 I a score=169139.000000 s hg38.chr17_GL383563v3_alt 345401 76 + 375691 acttgctgtgatttcatctctgaccaatcagcactcctggctcactggcttcccccacccaccacgttatccttaa s panTro4.chr17 329198 76 + 82630442 actcgctgtgatttcatctctgaccaatcagcactcctggctcactggcttcccccacccaccacgttatccttaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 204210 76 + 73212453 acgccctgtgatttcatctctgaccaatcagcactcctggctcactggcttcccccacccaccacgttttccttaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 307143 76 - 81552678 acgccctgtgatttcatccctgaccaatcagcactcctggctcactggcttcccccacccaccaagttatccttaa i nomLeu3.chr19 C 0 I 434 s rheMac3.chr16 237210 76 + 80904711 actccctgtaatttcattcctgaccagtcaccactcctggctcactggcttcccccacccaggacgttatccttaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 244903 76 + 80997621 actccctgtaatttcattcctgaccagtcaccactcctggctcactggcttcccccacccaggacgttatccttaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 222904 76 + 74645514 ACTCCCTGTAATTTCATTCCTGACCAGTCACCACTCccggctcactggcttcccccaccCAGCacgttatccttaa i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1034542 76 - 1291538 actccctatgacttcatcccagagcaatcagcactcctggctcactggctccccctacccaccaagttatccttaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I e canFam3.chr9 15782229 21 - 61074082 I e chlSab2.chr16 211694 945 + 75148670 I a score=484299.000000 s hg38.chr17_GL383563v3_alt 345477 220 + 375691 aagctctgatccctgcatgctcggggagactgattggagtaataataaaactcc--ggtctcccac----aAAAAAATA-----AATAAacaaaagaggcttttaaggaagcccgttggcccctcctgccatgtgaggacacagaaagaaagcaccatctatgaaccaggaaatgggccctgagcagacacagaatctgcccacaccttgatcttgaacttcccagcttcc s panTro4.chr17 329274 220 + 82630442 aaactccgatctctgcatgctcggggagactgattggagtaataataaaactcc--ggtctcccac----aAAAAAATA-----AATAAataaaagaggcttttaaggaagcctgttggcccctcctgccatgtgaggacacagaaagaaagcaccatctatgaaccaggaaatgggccctgggcagacacagaatctgcccacaccttgatcttgaacttcccagcttcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 204286 220 + 73212453 aaactctgatccctgcatgttcggggagactgactggagtaataataaaactcc--ggtctcccac----aGAAAAACA-----AATAAataaaagaggcttttaaggaagcctgttggcccctcctgccatgtgaggacacagaaagaaagcgtcatctatgaaccaggaaatgggccctgggcagacacagaatctgcccacacgttgatcttcaactccccagcttcc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 307653 224 - 81552678 aaactctgatccctgcatgctcggggagactgactggagtaataataacactct--ggtctcccacaAAAAAAAAAATA-----AATAAataaaagaggcttttaaggaagcctgttggcccctcctgccatgtgaggacacagaaagaaagcgccatctatgagccaggaaatgggccctgggcagacacagaatctgcccacaccttgatcttgaacttcccagcttcc i nomLeu3.chr19 I 434 C 0 s rheMac3.chr16 237286 220 + 80904711 aaactctgatccctgaatgctcggggagactgattggagtagtaagaaaactct--agtctcccac----GAAAAAATA-----AATAAataaaagaggcttttaaggaagcctattggcccctcctgccgtgtgaggacacagaaagaaagtgccatctatgaaccaggaaatgggccctcggcagacacagaatctgcccacaccttgatctggaacttcccagcttcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 244979 220 + 80997621 aaactctgatccctgaatgctcggggagactgattggagtagtaagaaaactcc--agtctcccac----GAAAAAATA-----AATAAataaaagaggcttttaaggaagcctattggcccctcctgccgtgtgaggacacagaaagaaagtgccatctatgaaccaggaaatgggccctcggcagacacagaatctgcccacaccttgatctggaacttcccagcttcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 222980 222 + 74645514 aaactctgatgcCCGAATGCTCGGGGAGACTGATTGGAGTAGTAATAAAACTCCAGAGTCTCCcac----gaaaaaata-----aataaacaaaacaggcTTTTAAGGAAGCCTATTGGCCCCTCCTgccgtgtgaggacacagaaagaaagtgccatctatgaaccaggaaatgggccctcggcagacacagaatctgcccacaccttgatctggaacttcccagcttcc i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1034618 217 - 1291538 aaactctgctccc-aaaggctcggggagactgatttaagcaataataaaactcc--agtttcttgc--CaaaaataataataataataaataaaaCAGGCATGTAAGGAAGCCTGttgg-ccctcctgccacgt--------aggaagaaagcgccatctaggaaccggaaaatgggccctcggcagacacagaatctgcccacaccttgatcttgaaattcccggcttcc i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I e canFam3.chr9 15782229 21 - 61074082 I e chlSab2.chr16 211694 945 + 75148670 I a score=30669.000000 s hg38.chr17_GL383563v3_alt 345697 12 + 375691 -aaaccgtcagaa s panTro4.chr17 329494 12 + 82630442 -aaaccatcagaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 204506 12 + 73212453 -aaaccatcagca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 307877 12 - 81552678 -aaaccatcagaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 237506 12 + 80904711 -aaaacatcagaa i rheMac3.chr16 C 0 I 326 s macFas5.chr16 245199 12 + 80997621 -aaaacatcagaa i macFas5.chr16 C 0 I 331 s papAnu2.chr16 223202 12 + 74645514 -aaaacatcagaa i papAnu2.chr16 C 0 I 329 s chlSab2.chr16 212639 12 + 75148670 -aaaccatgagaa i chlSab2.chr16 I 945 C 0 s calJac3.chrUn_GL286409 1034835 13 - 1291538 aaaaccataagaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I e canFam3.chr9 15782229 21 - 61074082 I a score=222898.000000 s hg38.chr17_GL383563v3_alt 345709 83 + 375691 ataaatgtctgttgtctataagccacccggatgatgatattttcatacagcagtctgaatgggctaagaGACTTCATAGCAAA s panTro4.chr17 329506 83 + 82630442 ataaatgtctgttgtctataagccacccggatgatggtattttcatacagcagtctgaatgggctaagaGACTTCATAGCAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 204518 83 + 73212453 ataaacgtctgttgtctataagccacccggatgatggtattttcgtacagcagtctgaacgggctaagaGACTTCATAGCAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 307889 83 - 81552678 ataaatgtctgttgtctataagccacccagatgatggtatttccatacagccgtctgaatgggctaagaGACTTCACAGCAAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 237844 82 + 80904711 ataaacgtctgttgtttataagccacccagatgatg-tattttcatggagcagtctgaaggggctaagaGACTTCAGAGCGAA i rheMac3.chr16 I 326 C 0 s macFas5.chr16 245542 82 + 80997621 ataaacgtctgttgtttataagccacccagatgatg-tattttcatggagcagtctgaaggggctaagaGACTTCAGAGCGAA i macFas5.chr16 I 331 C 0 s papAnu2.chr16 223543 82 + 74645514 ATAAacgtctgttgtttataagccacccagacGATG-TATTTTCACGGAGCAGTCTGAAGGGGCTAAGAGACTTCAGAGCGAA i papAnu2.chr16 I 329 C 0 s chlSab2.chr16 212651 82 + 75148670 ataaatgtctgttgtttataagccacccaggtgatg-tattttcatggagcagtctgaaggggctaagaGACTTCGGAGCGAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1034848 83 - 1291538 attaatgtctgtggtttataactcactcagatgatggtatttcagcatagcagtctgaatgggctaagaGACTTCCCAGTAAA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I e canFam3.chr9 15782229 21 - 61074082 I a score=636958.000000 s hg38.chr17_GL383563v3_alt 345792 209 + 375691 GAACCATGTCTTGTTTCTGCTCAGCTCACGTCGGAAGTAGAAGGTCATAACAAG-CCAGATGGTGTGAGAAAGGTCTTCATGTCCAGATGGGCATCACTGGACCCC-GAGAAGTGGTTTCTGCAAATGAGGGAAGCCCCCAGCAGGATTGGAAGTGGCAGGTAAAGAAAGGTCACTGCAGGAATCAGCTCTCAAAACAGGCGGTGGTGGTG s panTro4.chr17 329589 209 + 82630442 GAACCATGTCTTGTTTCTGCTCAGCTCACGTCGGAAGTAGAAGGTCATAACAAG-CCAGATGGTGTGAGAAAGGTCTTCATGTCCAGATGGGCATCACTGGACCCC-GAGAAGTGGTTTCTGCAAATGAGGGAAGCCCCCAGCAGGATTGGAAGTGGCAGGTAGAGAAAGGTCACTGCAGGAATCAGCTCTCAAAACAGGCAGTGGTGGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 204601 209 + 73212453 GAACCATGTCTTGTTTCTGCTCAGCTCACGTCGGAAGTAGAAGGTCATAACAAG-CCAGATGTTGTGAGAAAGGTCTTCATGTCCAGATGGGCATCACTGGACCCC-GAGAAGTAGCTTCTGCAAATGAGGGAAGCCCCCAGCAGGATTGGAAGTGGCAGGTAGAGAAAGGACATTGCAGGAATCAGCTCTCAAAACAGGCGGTGGTGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 307972 209 - 81552678 GAACCACGTCTTGTTTCTGCTCAGCTCACGTCGGAAGTAGAAGGTCATAACAAG-CCAGATGTTGTGAGAAAGGTCTTCGTGTCCAGGTGGGCATCACTGGACCCC-GAGAAGTGGTTTCTGCAAATGAGGGAAGCCCCCAGCAGGATTGGAAGTGGCAGGTAGAGAAAGGTCACTGCAGGAATCAGCTCTCAAAACAGGCGATGGTGGTG i nomLeu3.chr19 C 0 M 2503 s rheMac3.chr16 237926 209 + 80904711 GAACCATGGCTTGTTCCTGCTCAGCTCACGTCGGAAGTATAAGGTCACAACAAGCCCAGATGCTGTGAGAAAGGTCCTCATGTCTAGGTGGGCATCACTAGACCCT-GAGAAGTGGCTTCTGCAAATGAGGAAAGCCCCCAGCAGCACTGGAAGTGGCAGGTTAA-AAAGATCACTCCAGGAATCATCTCTCTAAACAGGCCGTGGTGGCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 245624 209 + 80997621 GAACCATGGCTTGTTCCTGCTCAGCTCACGTCGGAAGTATAAGGTCACAACAAGCCCAGATGCTGTGAGAAAGGTCCTCATGTCTAGGTGGGCATCACTAGACCCT-GAGAAGTGGCTTCTGCAAATGAGGAAAGCCCCCAGCAGCACTGGAAGTGGCAGGTTAA-AAAGATCACTCCAGGAATCATCTCTCTAAACAGGCCGTGGTGGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 223625 209 + 74645514 GAACCACGTCTTGTTTCTGCTCAGCTCACGTCGGAAGTATAAGGTCACAACAAGCCCAGATGCTGTGAGAAAGGTCCTCATGTCTAGGTGGGCATCACTAGACCCT-GAGAAGTGGCTTCTGCAAATGAGGAAAGCCCCCAGCAGCACTGGAAGTGGCAGGTTAA-AAAGGTCACTCCAGGAATCATCTCTCTAAACAGGCCGTGGTGGCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 212733 209 + 75148670 GAACCATGTCTCGTTTCTGCTCAGCTCACGTCGGAAGTATAAGGTCACAACAGGCCCAGATGCTGTGAGAAAGGTCCTCATATCTAGGTGGGCATCACTAGACCCT-GAGAAGTGGCTTCTGCAAATGAGGAAAGCCCCCAGCAGCACTGGAAGTGGCAGGTTAA-GAAGGTCACTCCAGGAATCATCTCTCTAAACAGGCCGTGGTGGCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1034931 209 - 1291538 TAACCACATCTTGTTTCTGCTCAGCTCACGTCGGAAGTGTAAGGTCATAACAAGCCAGGATGGTGTGAGAAAAGTCTTCACATGGAGGTGGGAGTCACTAGCCCCT-GAAAAGTGGCTTCTGCAAATGAGGAAAGCCCCCCACAGGATTAGATGCGGCA-GTAGAGAAAGGTCACTGCAGGAGTCAGCTCTCAGAGCAGGCCGTGGAGGTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15782250 187 - 61074082 GAACCATATTCTGT--CTGCTGAGCTCAAGTCATAAGTATAAGGTCCTAATGAGTCCCGAGAGTAGAATAAAGTTCTTCATGTCTAGGCTGGGGTCATCAGACCCCAAAGCAGTGGCTTCTGCAAATGAGGAAAACCATCATGAGGATTAAAAATGGC-----------------TGAAGGAACTGGCCATCCAGAAAGGTCATGG----- i canFam3.chr9 I 21 C 0 e mm10.chr11 75953274 1724 + 122082543 I a score=32906.000000 s hg38.chr17_GL383563v3_alt 346001 19 + 375691 GGGAGGGGAGGGGCGAACG s panTro4.chr17 329798 19 + 82630442 GGGAGGGGAGGGGCGAACG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 204810 19 + 73212453 GGGAGGGGAGGGGCGCACG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 238135 19 + 80904711 GGGAGGGGAGGGACGAACG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 245833 19 + 80997621 GGGAGGGGAGGGACGAACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 223834 19 + 74645514 GGGAGGGGAGGGACGAACG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 212942 19 + 75148670 GGGAGGGGAGGGACGAACG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1035140 12 - 1291538 -----GGGAGGAACACA-- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15782437 8 - 61074082 --GATGGAAA--------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75953274 1724 + 122082543 I e nomLeu3.chr19 308181 2503 - 81552678 M a score=80426.000000 s hg38.chr17_GL383563v3_alt 346020 36 + 375691 CTGGGAAA-------ATACAGGCAAC-TGAGCGGCTGCTTCGAG s panTro4.chr17 329817 36 + 82630442 CTGGGAAA-------ATACAGGCAAC-TGAGCGGCTGCTTCGAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 204829 36 + 73212453 CTGGGGAA-------ATACAGGCAAC-TCAGCGGCTGCTTCGAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 238154 35 + 80904711 CTGGGAAA-------ATACAGGCAGC-CGAG-GGCTGCTTCGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 245852 35 + 80997621 CTGGGAAA-------ATACAGGCAGC-CGAG-GGCTGCTTCGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 223853 35 + 74645514 CTGGGAAA-------ATACAGGCAGC-CGAG-TGCTGCTTCGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 212961 35 + 75148670 CTGGGAAA-------ATACAGGCAGC-CGAG-TGCTGCTTCGAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1035152 32 - 1291538 ----GAAG-------ATACAGGCAAC-TGAATGGCTGCTTCCAG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75954998 41 + 122082543 CTGGGAAATGGACCGTCACGGTCAGC-TGTGTGA--GCTACAAG i mm10.chr11 I 1724 C 0 s canFam3.chr9 15782445 37 - 61074082 CTGGGCAA-------ATGTGGGCCACTTGGGCGGCTACCCTGAG i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 308181 2503 - 81552678 M a score=1140095.000000 s hg38.chr17_GL383563v3_alt 346056 304 + 375691 ACCCAGCCTGGACGGA---------TTTGGGGTTAGAGATAGTTTCACATTCATCTGT--------------GAACCTCACCCATGGCACCTTCTCCTTAATCAGATGC-TCCCCAGACCCTGACATTAACAAGGACATGAGCTGTCAGAATTCAGAGACCGGTTGAAATTGGGCCATTTCTTATCACTAATCTGTGTGATTGGATGACATTGAAA-----------AAAGAAACCAGAAGAGAATTCATTTCC-TTTTTC-----ATTTTTAAACGAGGCCCCACTTAGAGCAGAAGAGTTTAGGTGTTGGGCCTTCTT-AAGCAAACAGTCCTCAAGGGA-------------------TGGT s panTro4.chr17 329853 304 + 82630442 ACCCAGCCTGGACGGA---------TTTGGGGTTAGAGATAGTTTCACGTTCATCTGT--------------GAACCTCACCCACGGCACCTTCTCCTTAATCAGACAC-TCCCCAGACCCTGACATTAACAAGGACATGGGCTGTCAGAATTCAGAGACCGGTTGAATTTGGGCCATTTCTTATCACTAATCTGTGTGATTGGATGACATTAAAA-----------AAAGAAACCAGAAGAGAATTCATTTCC-TTTTTT-----ACTTTTAAGTGAGGCCCCACTTAGAGCAGAAGAGTTTAGGTGTTGGGCCTTCTT-AAGCAAACAGTCCCCAAGGGA-------------------TGGT i panTro4.chr17 C 0 I 38 s ponAbe2.chr17 204865 318 + 73212453 ACCCGGCCTGGACGGA---------TTTGGGGTTAGAGATAGTTTCCCATTCATCTGTGATTTTTTTTTGGCGAACCTCACCCATGGCACCTTCTCCTTAATCAAACAC-TCCCCAGACCCTGACATTAACAAGGACATGGGCTGTGAGAATTCAGAGACTGGCTGAAATTGGGCCATTTCTTATCACTAATCTGTGTGAATGGATGACATTAAAA-----------AAAGAAACCAGAAGAGAATTCATCTCC-TTTTTT-----ACTTTTAAATGAGGCCCCACTTAGAGCAGAAGAGTTTAGGTGTTCGGTCTTCTT-AAGCAAACAGTCCCCAAGGGA-------------------TGGT i ponAbe2.chr17 C 0 I 38 s nomLeu3.chr19 310686 319 - 81552678 ACCCGGCCAGGACGGA---------TTTGGGGTTATATAGAATTTCACATTCATCTCTGACCTTTTTTTGGCGAACCTCACCCATAGCACCTTCTCCTTAATCAAATAC-TCCCCAGACTCTGACATTAACAAGCACATGGGCTGTGAGAATTCAGAGACCGGTTGAAATTGGGCCATTTCTTATCTCTAATCTGTGTGATTGGATGACATTAAAA-----------AAAGAAACCAGAAGAGAATTCATTTCCTTTTTTT-----ACTTTTAAATGAGGCCCCACTTAGAGCAGAAGAGTTTAGGTGTTGGGTCTTCTT-AAGCAAACAGTCCCCAAGGGA-------------------TGGT i nomLeu3.chr19 M 2503 I 37 s rheMac3.chr16 238189 326 + 80904711 TCCCGGCCTGGACTGACTTTTACCGTTTGGGGTTAGAGATAATTTCACATTCATCTCTGACCTTTTTTTGGTGAACCTCGCCCATGCCACCTTCTCCTTAATCAAATACTTCCCCAGACCCTGACGTTAACAAGGACATGGGCTGTGGCAATTCAGAGACCGGCTGAAATTGGGCCATTTCTCGTCTCTGATCTGTGTGATTGGATGACATTAAAA-----------AAAGAAACCAGAAGAGAATTCATTTCC-TTTTTT-----ACTTTTAAATGAGGCCCCACTTAGAGCAGAACAG--TAGGTGTTGAGCCTTCGT-AAGCAAACAGTCCCCAAGGGA-------------------TGGT i rheMac3.chr16 C 0 I 38 s macFas5.chr16 245887 326 + 80997621 TCCCGGCCTGGACTGACTTTTACCGTTTGGGGTTAGAGATAATTTCACATTCATCTCTGACCTTTTTTTGGCGAACCTCGCCCATGCCACCTTCTCCTTAATCAAATACTTCCCCAGACCCTGACGTTAACAAGGACATGGGCTGTGGCAATTCAGAGACCGGCTGAAATTGGGCCATTTCTCGTCTCTGATCTGTGTGATTGGATGACATTAAAA-----------AAAGAAACCAGAAGAGAATTCATTTCC-TTTTTT-----ACTTTTAAATGAGGCCCCACTTAGAGCAGAACAG--TAGGTGTTGAGCCTTCGT-AAGCAAACAGTCCCCAAGGGA-------------------TGGT i macFas5.chr16 C 0 I 38 s papAnu2.chr16 223888 326 + 74645514 TCCCGGCCTGGACTGACTTTTACCGTTTGGGGTTAGAGATAATTTCACATTCATCTCTGACCtttttttGGCGAACCTCGCCCATGCCACCTTCTCCTTAATCGAACACTTCCCCAGACCCTGACGTTAACAAGGACATGGGCTGTGGCAATTCAGAGACCGGCTGAAATTGGGCCATTTCTCATCTCTGATCTGTGTGATTGgatgacattaaaa-----------aaagaaaccagaagagaattcatttcc-tttttt-----acttttaaatgaggCCCCACTTAGAGCAGAACAG--TAGGTGTTGAGCCTTCGT-AAGCAAACAGTCCCCAAGGGA-------------------TGGT i papAnu2.chr16 C 0 I 38 s chlSab2.chr16 212996 326 + 75148670 TCCCGGCCTGGACTGACTTTTACCATTTGGGGTTAGAGATAATTTCACGTTCATCTCTGACCTTTTTTTGGCGAACCTCGCCCATGCCACCTTCTCCTTAATCAAATACTTCCCCAGACCCTGACGTTAACAAGGACATGGGCTGTGGCAATTCGGAGACCGGCTGAAATTGGGCCATTTCTCGTCTCTGATCTGTGTGATTGGATGACATTAAAA-----------AAAGAAACCAGAAGAGAATTCATTTCC-TTTTTT-----ACTTTTAAATGAGGTCCCACTTAGAGCAGAACAG--TAGGTGTTGAGCCTTCGT-AAGCAAACAGTCCCCAAGGGA-------------------TGGT i chlSab2.chr16 C 0 I 52 s calJac3.chrUn_GL286409 1035184 296 - 1291538 ACCCAG-CTGGGCTGATCTTTACCATCTGGGGTTAGAGATAAT------TTCATCTCTGACCTTTTTTTGGAGAGCCTCACCCATGGCACCTTCTCCTTGATTA---AC-----------------------AGGGCATGCCCTGTGACCATTCAGAGACCAGGTGAAATTGGGCCATTTCCTATCACTAATCTATGTGATTGGATGGCATTAAAA-----------AAAGAAACCAGAGGAGAATTCATTTCC-TTTTTT-----GCTTTTAAATGAGGCCCCACTTAAAGCAGAACAGTTTAGGTGTTGGGCCTTCTTAAAGCAAGCAGTCCCCAAGGGA-------------------TGGT i calJac3.chrUn_GL286409 C 0 I 30 s mm10.chr11 75955039 346 + 122082543 --ACAACC-GGGCGGC---TTACC-ACAGGGGCGCGGGATAGTTTCATATTCATCTCTGACCTTTCCTTTGCCAGTCTCACCCATGGTCCCTTGCTCTTGATCAAATACTCTCCCGGACCTTGACATTAACCAGGACAAGCACTGTGACAAGTCAGAAACCAGTTGAAATTGGGTCGTTCCCTGTCACTAACCTGTGTGATTTGATGACATTAAAAAGAAAAGGAAGAAAGAAGCCAGAAGAGAATTCATTTCC-TTTTTT-----ACTTTTAGAAGA----CAGCTCAGAGCCCAGCGATTTAGACA-GGAGTCTTCTA-GAGCACACAGTCCCCAGGAGGACTGCTTTCACTGGAACCCTGGC i mm10.chr11 C 0 I 8 s canFam3.chr9 15782482 330 - 61074082 ACCCAGCCTCAGCTGGCTTTTATTATTTGGGGTAAGAG--AATTTCACAGTCATATCTGACCTTTTCTTGGCGAACATCACCCATGACACCTGTCCCTTGATCAGATATTTTCCCAGACCCTGATATTAATGAGGACAAGCACTGTGACAACTCAGACACCAGTCAAAATTGAGTCGTTTCCTATCACTAACCTGTGTGATTGGATGACATTAAA------------AGAGAAATCAGAAGTGAATTCATTTCC-TTTTTTTTTAAACTTTTAAATGAGGTCCCACTTAGAGTAGAACAATGTGGGTGCTGAGCCTTCTG-AAGCAAACGGTCCCTGAGGGA-------------------TGGC i canFam3.chr9 C 0 I 42 a score=11563.000000 s hg38.chr17_GL383563v3_alt 346360 13 + 375691 CTG--CACCAAACA-C s panTro4.chr17 330195 14 + 82630442 CTG--CACCAAACACC i panTro4.chr17 I 38 C 0 s ponAbe2.chr17 205221 14 + 73212453 CTG--CACCAAACACC i ponAbe2.chr17 I 38 C 0 s nomLeu3.chr19 311042 13 - 81552678 CTG--CACCAAACA-C i nomLeu3.chr19 I 37 C 0 s rheMac3.chr16 238553 14 + 80904711 CTG--CAGCGAACGTC i rheMac3.chr16 I 38 C 0 s macFas5.chr16 246251 14 + 80997621 CTG--CAGCGAACGTC i macFas5.chr16 I 38 C 0 s papAnu2.chr16 224252 14 + 74645514 CTG--CAGTGAACGTC i papAnu2.chr16 I 38 C 0 s calJac3.chrUn_GL286409 1035510 13 - 1291538 CTGATCACCACAC--- i calJac3.chrUn_GL286409 I 30 I 4 s mm10.chr11 75955393 13 + 122082543 CTG--ACCCCAACAC- i mm10.chr11 I 8 C 0 s canFam3.chr9 15782854 13 - 61074082 CTG--CTCTGAACAC- i canFam3.chr9 I 42 C 0 e chlSab2.chr16 213322 52 + 75148670 I a score=915829.000000 s hg38.chr17_GL383563v3_alt 346373 240 + 375691 CCCCTCACCTAATCCCTGA-CACTCTACATCAAGGAGCAAGAGGAATGAACCTGGTTTCCAAAAATTAAGTCCAGAAAAGAACATGCATTCCTACATCTCACCTTCTAAATTAAGCCAGTGTTCTCCATTAACGTCCCACTGGGGACTGAGAGAAAATTGTTTCAAAACTGGGAACTAAATTTAAAGTTAGGAAG-AAAAAAAAA--------A-------TAACACTTTACGAGTCCCAAATGTTTGAAGTAGTTT----------------------------------- s panTro4.chr17 330209 240 + 82630442 CCCCTCACCTAATCCCTCA-CACTCTACATCAAGGAGCAAGAGGAATGAACCTGGTTTCCAAAAATTAAGTCCAGAAAAGAACATGCATTCCTACATCTCACCTTCTAAATTAAGCCAGTGTTCTCCATTAACGTCCCACTGGGGACTGAGAGAAAATTGTTTCAAAACTGGGAACTAAATTTAAAGTTAGGAAG-AAAAAAAAA--------A-------TAACACTTTACGAGTCCCAAATGTTTGAAGTAGTTT----------------------------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 205235 241 + 73212453 CCCCTCACCTAATCCCTCA-CACTCTACATCAAGGAGCAAGAGGAATGAACCTGGTTTCCAAAAATTAAGTCCAGAAAAGAACATGCATTCCTACATCTCACCTTCTAAATTAAGCCCGTGTTCTCCATTAACGTCCCACTGGGGATTGAGAGAAAATTGTTTCAAAACTGGGAACTAAATTTAAAGTTAGGAAGAAAAAAAAAA--------A-------TAACACTTTACGAGTCCCAAATGTTTGAAGTAGTTT----------------------------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311055 239 - 81552678 CCCCTCACCTAATCCCTCA-CACTCTACATCAAGGAGCAAGAGGAATGAACCTGGTTTCCAAAAATTAAGTCCAGAAAAGAACATGCATTCCTACATCTCGCCTTCTAAATTAAGCCCGTGTTCTCCATTAATGTCCCACTGGGGACTGAGAGAAAATTGTTTCAAAACTGGGAACTAAATTTAAAGTTAGGAAG--AAAAAAAA--------A-------TAACACTTTACAAGTCCCAAATGTTTGAAGTAGTTT----------------------------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 238567 239 + 80904711 CCCCTCACCCAATCCCTCA-CGCTCTACATCAAGGAGCAAGAGGAATGAACCTGGTTTCCAAAAATTAAGTCCAGAAAATTACATGCATTCCTCCATCTCGCCTTCTAAATTAAGCCAGTGTTCTCCAGTAACGTCCCACTGGGGACTGAGAGAAAATTGTTTCGAAACTGGGAACTAAATTTAAAGTGAGGAAG--AAAAGAAA--------A-------TAACATTTCACGAGTCCCAAATGTTTGGAGCAGTTT----------------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 246265 239 + 80997621 CCCCTCACCCAATCCCTCA-CGCTCTACATCAAGGAGCAAGAGGAATGAACCTGGTTTCCAAAAATTAAGTCCAGAAAATTACATGCATTCCTCCATCTCGCCTTCTAAATTAAGCCAGTGTTCTCCAGTAACGTCCCACTGGGGACTGAGAGAAAATTGTTTCGAAACTGGGAACTAAATTTAAAGTGAGGAAG--AAAAGAAA--------G-------TAACATTTCACGAGTCCCAAATGTTTGGAGCAGTTT----------------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 224266 239 + 74645514 CCCCTCCCCCAATCCCTCA-CGCTCTACATCAAGGAGCAAGAGGAATGAACCTGGTTTCCAAAAATTAAGTCCAGAAAATTACATGCATTCCTACATCTCGCCTTCTAAATTAAGCCAGTGTTCTCCAGTAACGTCCCACTGGGGACTGAGAGAAAATTGTTTCGAAACTGGGAACTAAATTTaaagtgaggaag--aaaagaaa--------a-------taacattttacgaGTCCCAAATGTTTGGAGCAGTTT----------------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 213374 239 + 75148670 CCCCTCACCCAAACCCTCA-CGCTCTACATCAAGGAGCAAGAGCAATGAACCTGGTTTCCAAAAACTAAGTCCAGAAAATAATATGCATTCCTACATCCCGCCTTCTAAATTAAGCCAGTGTTCTCCAGTAACGTCCCACTGGGGACTGAGAGAAAATTGTTTCGAAACTGGGAACTCAATCTAAAGTGAGGACA--AAAAGAAA--------A-------TAACACTTTACGAGTCCCACATGTTTGGAGCAGTTT----------------------------------- i chlSab2.chr16 I 52 C 0 s calJac3.chrUn_GL286409 1035527 237 - 1291538 ACCCTCACCTAATGCCTCA-CACGCTACATCAAGTAGCAAGAGGAATGAAGCTGGTTTCCAAAAATTAAGTCCAGAAAATAACACTCATGCCTACATTTCACCTTCTAAATTAAGCCAGTGCGCTCCATTAACTTCCCACTGGGGACTGAAAGAAAATTGTTTCAAAGCTGTGAACTAAATTTAAAGATGGGCAG----AAAAAA--------A-------TAACACTTCATAACTCCCAAATGTTCGAAGTAGTTT----------------------------------- i calJac3.chrUn_GL286409 I 4 C 0 s mm10.chr11 75955406 242 + 122082543 CCCCTCATCTGAT-----A-TGCTGTCCATTAAGGAGAGAAAAGGGTGAATTTAGATTCCCAAAATGAACTGTGGGAGATGACATTCACTTCTGTACTTCTCCTTCTAAATTAAGCCAGTGTTCTTCATTAGCTTGCCACGGGGGACTGAGAGAAAATTGTCTTAAAACTCAAAACTGAATTTAAACTAAGTAAG--GAAAAAAACAAAAAACA-------AAAAAACCTACCAAGACCAGATGTTTAAAGCAGTTT----------------------------------- i mm10.chr11 C 0 I 823 s canFam3.chr9 15782867 282 - 61074082 CCCCTCCCCTAGCCCCACAGCACTCTATGTGGAGAAGCAAGAGAAATAAACCTGCTTTCCAAAAATGAAGTTCAGAAAATCATACACACTCCTATATTTCACCTTCTAAATTAAGccagtgttctccattaactttccactggggactgagagaaaattgttccaaaattgcaaactaaatttaaagttagaggg--gggaaaaa--------acAACAACCAACAATCCACCAGGTCCAAATGTTCGAAGTAGCTTTGCTGCCAACttttattttttttattttttttttt i canFam3.chr9 C 0 C 0 a score=101757.000000 s hg38.chr17_GL383563v3_alt 346613 30 + 375691 GTTACAAACTTTCAAGTCAGATCTAAAGTG s panTro4.chr17 330449 30 + 82630442 GTTACAAACTTTCAAGTCAGATCTAAAGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 205476 30 + 73212453 GTTACAAACTTTAAAGTCAGATCTAAAGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311294 30 - 81552678 GTTACAAACTTTAAAGTCAGATCTAAAGTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 238806 30 + 80904711 GTTACAAACTTTAAAGTCAGATCTGAAGCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 246504 30 + 80997621 GTTACAAACTTTAAAGTCAGATCTAAAGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 224505 30 + 74645514 GTTACAAACTTTAAAGTCAGATCTAAAGCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 213613 30 + 75148670 GTTACAAACTTTAAAGTCAGATCTAAAGTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1035764 30 - 1291538 GTTACGAACTTTAAAGTGAGATCTATGGCG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15783149 30 - 61074082 GCTGCCAACTTTTAAATTAGAGGTAAAGTG i canFam3.chr9 C 0 C 0 e mm10.chr11 75955648 823 + 122082543 I a score=216475.000000 s hg38.chr17_GL383563v3_alt 346643 60 + 375691 ACTGCCTGTTTGAGAGTTCACATTGTCAGCCCAGGAATCCAACTGTCCAAAT-GGGGTCAT s panTro4.chr17 330479 60 + 82630442 ACTGCCTGTTTGAGAGTTCACATTGTCAGCCCAGGAATCTAACTGTCCAAAT-GGGGTCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 205506 60 + 73212453 ACTGCCTGTTTGAGAATTCACATTGTCAGCCCAGGAATCCAACTGTCCAAAT-GGGGTCAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311324 61 - 81552678 ACTGCCTGTCTGAGAGTTCACGTTGTCAGCCCAGGAATCCAACTGTCCAAATGGGGGTCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 238836 60 + 80904711 ACCGCCAGTTTGAGGGTTCACCTTGTCAGCCCAGGAATCCAACTGTCCAAAT-GGGGTCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 246534 60 + 80997621 ACCGTCGGTTTGAGGGTTCACCTTGTCAGCCCAGGAATCCAACTGTCCAAAT-GGGGTCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 224535 60 + 74645514 ACCGCCAGTTTGAGAGTTCACCTTGTCAGCCCAGGAATCCAACTGTCCAAAT-GGGGTCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 213643 60 + 75148670 ACCGCCAGTTTGAGAGTTCACCTTGTCAGCCCAGGAATCCAACTGTCCAAAT-GGGGCCAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1035794 47 - 1291538 ACTGCCTGTTTGAGAGTT-------------CAGGAATCCAACCATCCAAAT-AGGGTCAT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75956471 60 + 122082543 ATTGCCTCCTTGAGAGTTTAGCTAGTCAGAGCAAGAGTACAACTGTCTAAAT-AGAGTCGT i mm10.chr11 I 823 I 5033 s canFam3.chr9 15783179 60 - 61074082 ACTACCTGTCTCAAAGCTCACCTTGTCAGGCCAGGAATGCAAGGGTTTGAAT-GGGGTCGT i canFam3.chr9 C 0 C 0 a score=1263726.000000 s hg38.chr17_GL383563v3_alt 346703 466 + 375691 GTACAAACTCAGGGATTGGTTAAAGGTCAATTACACC-CTCA----GTTTTAGCAATACAAGGGGTATACTCCACTAAAGTTTTGGTTCTCGTAGTTGGCTGCGCACACTGTATCCACTGGGgttgt--------aagcaacagaaatcaagtctgcacgacttaagcagaaaggaatgtactggcagaataccttggggatacctcgtagctcagaacc-------------------------------------aatcagaaggctgaagaccctgatggaaa--------------------------ctgcAACAGTCTAAGGCCTTCAAGTCCCATCACCTTCCACTATGGAAGT-AGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCGGAGTGGACAGCCCAGCAAAGTAGCCTGGCGTGGGCCCAGgtcccatcccttgagctgggtgatgactacatggggtgtgtccaccttgtgaaa------atgcagaat--------------------------------------------------------------------------------------------------acttctgatgcatgcagttttctg s panTro4.chr17 330539 466 + 82630442 GTACAAACTCAGGGATTGGTTAAAGGTCAATTACACC-CTCA----GTTTTAGCAATACAAGGGGTATACTCCACTAAAGTTTTGGTTCTCGTAGTTGGCTGGGCACACTGTATCCACTGGGgttgt--------aagcaacagaaatcaagtctgcacgacttaagcagaaaggaatgtactggcagaataccttggggatacctcgtagctcagaacc-------------------------------------aatcagaaggctgaagaacctgatggaga--------------------------ctgcAACAGTCTAAGGCCTTCAAGTCCCATCACCTTCCACTATGGAAGT-AGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCGGAGTGGACAGCCCAGCAAAGTAGGCTGGCATGGGCCCAGCTCCCATCCcttgagctgggtgatgactacatggggtgtgtccactttgtgaaa------atgcagaat--------------------------------------------------------------------------------------------------acttctgatgcgtgcagttttctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 205566 502 + 73212453 GTACAAACTCAGGGATTGGTTAAAGGTCAATTACACC-CTAA----GTTTTAGCAATACAAGGGGTATACTCCACTAAAGTTTTGGTTCTCGTAGTTGGCTGGGTGCACTGTATCCATTGGGgttgt--------aagcaacagaaatcaagtctgcatgacttaagcagaaaggaatgtactggcagaataccttgggaatacctcgtagCTCAGAACCAATCAAATACCTTGGGAATACCTCGTAGCTCAGAACAAATCAGAAGGCTGAAGACCCTGATGGGGA--------------------------CTGCAACAGTTT-AGGCCTTCAAGTCCCATCACCCTTCACTATGGAAATAAGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCAGAGTGGACAGCCCAGCAAAG-AACCCGGCATGGGCCAAAGTCCCACCCCTTGAGCTGGGTGATGACTACATGGGGTGTGTCCACTTGGTGAAA------ATGCAGAAT--------------------------------------------------------------------------------------------------ACTTCTGATGCGTGCAGTTTTCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311385 455 - 81552678 GTACAAACTCAGGGATCGGTTAGAGGTCAGTTACACC-CTAA----GTTTTAGCAACGCAAGGGGTATACTCCACTAAAGTTTTGGTTCTCGTAGTTGGCTGGGTGCACtgtatccatcggggttgt--------aagcaacagaaatcaagtctgcataacttcagcagaaaggaatgtactgg-----------gggaatacctcgtagctcagaacc-------------------------------------aatcagaaggctgaagaccctgatggaga--------------------------ctCCAACAGTCT-AGGCTTTCAAGTCCCATCACCCTTCACTATGGAAATAAGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCAGAGTGGACAGCCCAGCAAAGTAGCCTGGCATGGGCCaaggtcccatcccttgagctgggtgatgaccacatggggtgtgtccactttgtgaaa------atgcagaat--------------------------------------------------------------------------------------------------acttctgatgcatgcagttttctg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 238896 461 + 80904711 GTACAAAC-CAGGGATTGGTTAAAGGCCATTTACACC-CTAA----GTTTTAGCAGCACAAGGGGGACA-TCCCCAAAAGGTTTGGTTCTCGTAGTTGGCTGGGGGCACtgtatccatcgggggtcttcggttccaagccacagaaatcaagtgtgcatgacttcagcggaaaggaaggtgctggca-----------gaattccttgtagctcagaacc-------------------------------------aatcagaaggctgaagatcctgacgggga--------------------------ctgcAACAGTCT-CGGCCTTCAAGTCCCATCAGCCTTCACTACGGGAATAAGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCAGAGTGGAGAGCCCAGCAAAGCAGCCTGGCGTGGGCCAAGGTCGCACCCcttgagctgggtgatgactacacggggtgtgtccactttgtaaaa------aggcagaat--------------------------------------------------------------------------------------------------acttctgaggtgtgccgttttctg i rheMac3.chr16 C 0 I 35 s macFas5.chr16 246594 453 + 80997621 GTACAAAC-CAGGGATTGGTTAAAGGCCATTTACACC-CTAA----GTTTTAGCAGCACAAGGGGGACA-TCCCCAAAAGGTTTGGTTCTCGTAGTTGGCTGGGGGCACTGTATCCATCGGGGGTCTTCGGTTCCAAGCCACAGAAATCAAGTGTGCATGACTTCAGCGGAAAGGAAGGTGCTGGCA-----------GAATTCCTTGTAGCTCAGAACC-------------------------------------AATCAGAAGGCTGAAGATCCTGACGGGGA--------------------------CTGCAACAGTCT-CGGCCTTCAAGTCCCATCAGCCTTCACTACGGGAATAAGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCAGAGTGGAGAGCCCAGCAACGCAGCCTGGCGTGGGCCAAGGTCGCACCCCTTGAGCTGGGTGATGACTACACGGGGTGTGTCCACTTCTG--------------AGAAT--------------------------------------------------------------------------------------------------ACTTCTGAGGTGTGCCGTCTTCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 224595 461 + 74645514 GTACAAAC-CAGGGATTGGTTAAAGGCCATTTACACC-CTAA----GTTTTAGCAGCACGAGGGGGACA-TCCCAGAAAGTTTTGGTTCTCGTAGTTGCCTGGGGGCACTGTATCCATCGGGGGTCTTCGATTCGAAGCAACAGAAATCAAGTCTGCATGACTTCAGCGGAAAGGAAGGTACTGGCA-----------GAATTCCCTGTAGCTCAGAACC-------------------------------------AATCAGAAGGCTGAAGATCCTGACGGGGA--------------------------CTGCAACAGTCT-CGGCCTTCAAGTCCCATCAGCCTTCACTACGGGAATAAGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCAGAGTGGAGAGCCCAGCAAAGCAGCCCGGCGTGGGCCAAGGTCGCACCCCTTGAGCTGGGTGATGACTATATGGGGTGTGTCCACTTTGTAAAA------AGGCAGAAT--------------------------------------------------------------------------------------------------ACTTCTGATGTGTGCCGTTTTCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 213703 461 + 75148670 GTACAAAC-CAGGGATTGGTTAAAGGTCATTTAGACC-CTAA----GTTTTAGCAGCACAAGGGGGACA-TCCCCAAAAGTTTTGGTTCTCGTAGTTGGCTGGGGGCACtgtatccatcggggttcttcggttcgaagcaacagaaatcaagtctgcatgacttaagcagaaaggaaggtactggca-----------gaattccctgtagctcagaacc-------------------------------------aaccagaaggctgaagatcctgacgggga--------------------------CTGCAACAGTCT-AGGCCTTCAAGTCCCATCAGCCTTCACTACGGGAATAAGTGGCTCCAAAATCCTTTCTCCCCTTGCTTCACTCTGC-CAAGTTTCAGATCCCAGAGTGGAGAGCCCGGCACAGCAGCCCGGCGTGGGCCAAGGTCGCACCCCTTGAGCTGGGTGATGACTACATGAGGTGTGTCCACTTTGTAAAA------ACGCAGAAT--------------------------------------------------------------------------------------------------ACTTCTGATGTGGGCCGTTTTCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1035841 577 - 1291538 GTACAAACTCAGGGGCTAGTGAAAGGTCATTTACTCC-CTAA----GTTTTAGCAATAGGAGGGATACACTCCAACAAATTTTTGGTTCTCATAGTTGGCTGGGCACACtgtgtccatcggggttctttggtcataagcaacagaaatcaagtctgtgtgagttaagtggagaggaatttgctggag-----------gactacctagtagctcagaacc-----------------------------------------agagggctgaagacccCAGTGGGGAAGAAAG-----CAGGCGCCCTGCTGGCTGCAACAGTAC-AGGTCTTC-AGTCTCACCCACCTTCACGACGGGAACAAGTGCCTCCAAAATCCTTCCTCTCCTTGCTTCACTCCAG-AAAGTTTCAGATGCCAGAGTGGACAGCCCAGCACAGCAGCCCCATGTGGGCTGAGATCCCACCCCTTGAGCTGGGAGATAACTATGTGGGGTGTGTCCACTTTGTAAAA------ATGCAGAATTCTTCTGATGTGTGCTGCATTAAACATATGGGGCACTTCCGACGTGTGCCGCATTAAACACACAGTGCACTTCCGATGTGAGCTGCCTTAAACAGTACACTTCTGATGTGTACAGTTTTCTG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15783239 476 - 61074082 AGAAGACCTCAGGGATTGGTTATAGGTAGATTTGACTGCTAAGATGGTTGTAGCAATGTGAGGGGGGCAATCCACTAAAATCTGGGGGCTAGTGGTTGGGTGTG----Ctgtatccaccaggaattt--gactgcaagcaacagaagccaggtttggctgatataagcacaaaggaattcactggag-----------ggataCCT---------------------------------------------------GATGGCAAGGCTGAAGGTGCTAATGTGGGAAAAAAAAATCCATGAACTCTAATAGCTACAAGAGTCC-GGGCCTCAAAGTCTCTTTGGC-TCCACTGCAG-AATGAGGGGCTCTACTATCCTTTC-CCTCATGCCTCAATCAGCATAGATGTCCAGCCCCAGAATGGACAGCCCAGCTGACTGGCCCAGAGTGGGCCAAGATCCCACCtcttga-ctaggcgatggctacatg-gctgtgtacactttcaatagctatctaagcaatat--------------------------------------------------------------------------------------------------actttgaatgtgagtagttttctg i canFam3.chr9 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I a score=16505.000000 s hg38.chr17_GL383563v3_alt 347169 15 + 375691 aagagatgctacgct s panTro4.chr17 331005 15 + 82630442 AAGAGATGCTACGCt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 206068 15 + 73212453 AAGAGATGCTATACt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311840 15 - 81552678 aagagaggctacact i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 247047 9 + 80997621 -ATAGATGCT----- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 225056 9 + 74645514 -ATAgatgct----- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 214164 14 + 75148670 -ACAGACGCTATGCt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1036418 14 - 1291538 AATAGATGCTATGC- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15783715 15 - 61074082 aatggatcttatact i canFam3.chr9 C 0 I 9331 e mm10.chr11 75956531 5033 + 122082543 I e rheMac3.chr16 239357 35 + 80904711 I a score=9630.000000 s hg38.chr17_GL383563v3_alt 347184 16 + 375691 tcc-ttttttttttttc s panTro4.chr17 331020 17 + 82630442 tcctttttttttttttc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 206083 13 + 73212453 tcc----ttgttttttc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311855 13 - 81552678 tcc----tttttttttc i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 247056 10 + 80997621 -------CTGCTGCTTC i macFas5.chr16 C 0 I 15 s papAnu2.chr16 225065 10 + 74645514 -------tctttttttc i papAnu2.chr16 C 0 I 9 s chlSab2.chr16 214178 13 + 75148670 tcc----tttttttttt i chlSab2.chr16 C 0 I 6 s calJac3.chrUn_GL286409 1036432 8 - 1291538 -------tttttttt-- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e rheMac3.chr16 239357 35 + 80904711 I a score=143739.000000 s hg38.chr17_GL383563v3_alt 347200 67 + 375691 cttttgagacagggttttgctctgtcacccaagctgaagt------------------------------gcagtgggacaagggtcactgtagcct s panTro4.chr17 331037 67 + 82630442 ctttcgagacagggtttcgctctgtcacacaagctgaagt------------------------------gcagtggtacaagtgtcactgtagcct i panTro4.chr17 C 0 I 3696 s ponAbe2.chr17 206096 67 + 73212453 ctttcgaaacagggttttgctctgtcacccaagctgaagt------------------------------gtagtggtacaagggtcactgtagcct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311868 67 - 81552678 cttttgagacagggttttgctctgtcacccaagctgaagt------------------------------gtagtggtacaagggtcactgtagcct i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 239392 70 + 80904711 Cttttgagacagggttttgctctgtcacccaggctgaaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--------------------------- i rheMac3.chr16 I 35 C 0 s macFas5.chr16 247081 67 + 80997621 Cttttgagacagggttttgctctgtcacccaggctgaagg------------------------------gcagtggcacaaggctcactgcagcct i macFas5.chr16 I 15 C 0 s papAnu2.chr16 225084 56 + 74645514 cttctgagacagggttttgctctgtcgcccaggctgaagg------------------------------gcagtggtacaaggct----------- i papAnu2.chr16 I 9 C 0 s chlSab2.chr16 214197 66 + 75148670 cttttgagaca-ggttttgctctgtcgcccaggcggaagg------------------------------gcagtggtacaaggctcactgcagcct i chlSab2.chr16 I 6 C 0 s calJac3.chrUn_GL286409 1036440 67 - 1291538 tttttgagacagggtcttgctctgtcacctaagctgaagt------------------------------gcagtggtacaaggctcactgcagcct i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I a score=348771.000000 s hg38.chr17_GL383563v3_alt 347267 188 + 375691 tg---acctcccacctcagcctcccaagtagctgggactacatgtgcatgctaccacacctggctaatttttcta--ttt-ttttagagatgggtttttgccatgctgcccaggctagtctcaaactcctgggctcaagcaatccacccacctcagcctcccaaagtgctgggattacaggcgtgagccaccat s ponAbe2.chr17 206163 189 + 73212453 tg---acctcccacctcagcctcccaagtagctgcgactacatgttcatgccaccacacctggctaatttttctattttt-ttttagcgatggg-ttttgccatgttgcccaggctggtctcaaactcctgggcccaagcaatctgcccacctcggcctcccaaagtgctgggattaccggcacgagccaccac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 311935 137 - 81552678 tg---acctcccacctcagcctcccaagtagctgggactgcatg----tgctaccacacctggctaatttttcta--ttt-ttttagagatgggtttttgccatgttgcccaggctggtctcaaactcctgggctcaagcaatctgc----------------------------------------------- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 239462 186 + 80904711 ------nnnnnnnnnncagcctcccgagtagctgggactacatgtggacgctaccacacctggctaatttttcta-tttt-tttaagagatgggtttttgccatgttgcccaggctggtctcaaactcctgggctcaagcagtctgcccacctcggcctcccaaagtgctggcattacaagcgtgagccaccac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 247148 189 + 80997621 tg---gcctcccacctcagcctcccgagtagctgggactacatgtggacgctaccacacctggctaatttttcta-tttt-tttaagagatgggtttttgccatgttgcccaggctggtctcaaactcctgggctcaagcagtctgcccacctcggcctcccaaagtgctgggattacaagcgtgagccaccac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 225140 176 + 74645514 ----------------cagcctcccgagtagctgggactacatgtggacgctaccacacctggctaatttttcta-tttt-tttaagagatgggtttttgccatgttgcccaggctggtctcaaactcctgggctcaagcagtctgcccacctcggcctcccaaagtgctgggattacaggcgtgagccaccac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 214263 193 + 75148670 tgactgcccagaacctcagcctcccgagtagctgggtctacatgtgcacgctaccacacctggctaatttttcta-ttttcttttagagatgggtttttgctatgttgcccaggctggtcacaaactcctgggctcaagcagtctgcccacctcggcctcccaaagtgctgggattacaggcttgagccaccgc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1036507 189 - 1291538 ---gaacctcccaccttagcctcccaagtagctgggactacctgtgcatgccaccacacctggccaatttttctg-tttt-ttgtagagatgggtttttgtcatgttgcccaggctggcctcaaactcccaggctcaagaaatctgcccacctgggcctcccaaattgctggaattataggcataagccaccAT i calJac3.chrUn_GL286409 C 0 I 954 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e panTro4.chr17 331104 3696 + 82630442 I a score=125568.000000 s hg38.chr17_GL383563v3_alt 347455 93 + 375691 gccaggcactatgcttcaattttttaagaaaaaacgttcacctatcccatgaccgagcaattccactcttaggaaaagtaaaacaggtaagag s ponAbe2.chr17 206352 92 + 73212453 gccaggcACTATGCTTcaa-tttttaagaaaaaacgttcacctatcccatgaccgagcaattccactcttCAAAGAAGTAAAACAGGTAAGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 312072 53 - 81552678 ----------------------------------------ccTATCCCATGACCAAGCAATTCCACTCTTAAAAGAAGTAAAACAGGTAAGAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 239648 93 + 80904711 gccaggcACTATCCTTCGAttttttaagaaaaaacattcacctagcccatgactgagcaattccacacttaaaagaagtaaaacaggtaagag i rheMac3.chr16 C 0 I 621 s macFas5.chr16 247337 93 + 80997621 gccaggcACTATCCTTCGAtttcttaagaaaaaacattcacctagcccatgactgagcaattccacacttaaaagaagtaaaacaggtaagag i macFas5.chr16 C 0 I 621 s papAnu2.chr16 225316 93 + 74645514 gccaggcactatcctttgattttttaagaaaaaacattcaCCTAGCCCATGACTGAGCAATTCCACActtaaaagaagtaaaacaggtaagag i papAnu2.chr16 C 0 I 634 s chlSab2.chr16 214456 90 + 75148670 gcccagc-cTGT--TTcaattttttaagaaaaaacattcacctagcccatgacggagcaattccacactcaaaagaagtaaaacaggtaagag i chlSab2.chr16 C 0 I 1205 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e panTro4.chr17 331104 3696 + 82630442 I a score=600.000000 s hg38.chr17_GL383563v3_alt 347548 2 + 375691 gg s ponAbe2.chr17 206444 2 + 73212453 GG i ponAbe2.chr17 C 0 I 525 s nomLeu3.chr19 312125 2 - 81552678 gg i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e chlSab2.chr16 214546 1205 + 75148670 I e papAnu2.chr16 225409 634 + 74645514 I e rheMac3.chr16 239741 621 + 80904711 I e macFas5.chr16 247430 621 + 80997621 I e panTro4.chr17 331104 3696 + 82630442 I a score=25967.000000 s hg38.chr17_GL383563v3_alt 347550 370 + 375691 ccaggtgcaatggctcacacctgtaatccccagcactttgggagg-cgaggcgggcggatcacaaggtcaggagattgagaccatcctggctaacacagtgaaaccccatctctactaaaaatataaaaaattagctgggtgtggtggcgggtgcctgtaatcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtagagtttgcagtgagccaagatcgcgccactgcactccagcctgggcaacagagcgagactccgtatcaaaaaacaaacaaacaaacaaaaaaaacaggtaagagaaacaaagtatatgacgggaatgaaaaacaaggtcaacatgaatacttatggcc s nomLeu3.chr19 312127 352 - 81552678 ccgggtgcagtggctcacgcctgtaat-cccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccatcctggctaacgcagtgaaaccccgtctgtactaaaaatacaaaaaattagccgggcgtggtggtgggcgcctgtagtcccagctactagggaggctgaggcaggagaatggcatgaacccaggaggcggagtttgcagtgagcagagatcacgccactgcactccagcctgggcgacagagcgagactccgtctcgaaaaa-------------aaaaaaaacaggtaagag-aacaaaTTATATGGCAG--ATGAAAAA-AAGGTCAACACG-ATGCTTGTGgcc i nomLeu3.chr19 C 0 I 1039 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e chlSab2.chr16 214546 1205 + 75148670 I e papAnu2.chr16 225409 634 + 74645514 I e rheMac3.chr16 239741 621 + 80904711 I e macFas5.chr16 247430 621 + 80997621 I e ponAbe2.chr17 206446 525 + 73212453 I e panTro4.chr17 331104 3696 + 82630442 I a score=0.000000 s hg38.chr17_GL383563v3_alt 347920 848 + 375691 actccattgataatagccaaaaatgaacacagcccagaggtccatcaccaggtgaatagataagcaacttatacatactcatagcaaggaatactgctgaccaaaaggaagcaactaccgacccaaacaacaactggggtgaatctcaacaacgtcatgccaaatgagagcgagagacgcctttcacaaaagaacacacgttgtatgatcccatttacatgaagttccagtacaggtaaaattaacctatggtagctgggtgcagtggctcatgcctgtaatcccagcactttgagaggctgaggctggaagatcacctggggtcaggagttcaagaccagcctggccaacatggtgaaacccagtctctactaaaaatagaaaaatcagctgggtgtggtggcacacgcctgtaatcccagctactcgggaggctgaggcgggagaatcacttgaacccaggaggcggaggttgtagtgagcagagatcgcaccattgcactccagcctgggcaacaagagtaaagctctgtctcaaaaaaaaaaaaaaaaaaaattaatctctggtgaaaaaactccaaagagtggctgactgcagggggagtgggacagggattgacggggacggggtgtgagagTGACTGACTGCAGGGGGAGTGGGACAGGGATTGACGGGGATGGGGTGTGAGAGTGGCTGACTGCGGGGGGAGTGGGACAGGGATTGACGGGGACGGGGTGTGAGAGTGACTGACTGCAGGGGAAGTGGGACAGGGATTGACGGGGACGGGGCGTGAGAGTGACTGACTGCAGGGGAAGTGGGACAGGGATTGACGGGGACGGGGTGTGAG e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e chlSab2.chr16 214546 1205 + 75148670 I e papAnu2.chr16 225409 634 + 74645514 I e rheMac3.chr16 239741 621 + 80904711 I e macFas5.chr16 247430 621 + 80997621 I e nomLeu3.chr19 312479 1039 - 81552678 I e ponAbe2.chr17 206446 525 + 73212453 I e panTro4.chr17 331104 3696 + 82630442 I a score=3765.000000 s hg38.chr17_GL383563v3_alt 348768 51 + 375691 AGTGGCTGACTGCGGGGGGAGTGGGACAGGGATTGACGGGGACGGGGTGTG s papAnu2.chr16 226043 49 + 74645514 AGTGGCTGACTGCGGGGG-AGTGG-ACAGGGATTGATGGGGACGGGGTGTG i papAnu2.chr16 I 634 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e chlSab2.chr16 214546 1205 + 75148670 I e rheMac3.chr16 239741 621 + 80904711 I e macFas5.chr16 247430 621 + 80997621 I e nomLeu3.chr19 312479 1039 - 81552678 I e ponAbe2.chr17 206446 525 + 73212453 I e panTro4.chr17 331104 3696 + 82630442 I a score=1617.000000 s hg38.chr17_GL383563v3_alt 348819 4 + 375691 AGAG s ponAbe2.chr17 206971 4 + 73212453 agag i ponAbe2.chr17 I 525 C 0 s nomLeu3.chr19 313518 4 - 81552678 agag i nomLeu3.chr19 I 1039 C 0 s papAnu2.chr16 226092 4 + 74645514 ACAG i papAnu2.chr16 C 0 T 53 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e chlSab2.chr16 214546 1205 + 75148670 I e rheMac3.chr16 239741 621 + 80904711 I e macFas5.chr16 247430 621 + 80997621 I e panTro4.chr17 331104 3696 + 82630442 I a score=10555.000000 s hg38.chr17_GL383563v3_alt 348823 49 + 375691 TGACTGACTGCAGGGGAAGTGGGACAGGGATTGACGGGGACGGGGCGTG s ponAbe2.chr17 206975 49 + 73212453 tggctgactgcagggggagtgagacagggatcgacggggacggggtgtg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 313522 47 - 81552678 tggctgactgcagggg-agtgggacagggattgac-gggacggcgtgtg i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e chlSab2.chr16 214546 1205 + 75148670 I e papAnu2.chr16 226096 53 + 74645514 T e rheMac3.chr16 239741 621 + 80904711 I e macFas5.chr16 247430 621 + 80997621 I e panTro4.chr17 331104 3696 + 82630442 I a score=910.000000 s hg38.chr17_GL383563v3_alt 348872 1 + 375691 A s ponAbe2.chr17 207024 1 + 73212453 a i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 313569 1 - 81552678 a i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 240362 1 + 80904711 a i rheMac3.chr16 I 621 C 0 s macFas5.chr16 248051 1 + 80997621 a i macFas5.chr16 I 621 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1036696 954 - 1291538 I e chlSab2.chr16 214546 1205 + 75148670 I e papAnu2.chr16 226096 53 + 74645514 T e panTro4.chr17 331104 3696 + 82630442 I a score=1500.000000 s hg38.chr17_GL383563v3_alt 348873 1 + 375691 G s ponAbe2.chr17 207025 1 + 73212453 g i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 313570 1 - 81552678 g i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 240363 1 + 80904711 g i rheMac3.chr16 C 0 C 0 s macFas5.chr16 248052 1 + 80997621 g i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1037650 1 - 1291538 g i calJac3.chrUn_GL286409 I 954 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e chlSab2.chr16 214546 1205 + 75148670 I e papAnu2.chr16 226096 53 + 74645514 T e panTro4.chr17 331104 3696 + 82630442 I a score=233181.000000 s hg38.chr17_GL383563v3_alt 348874 169 + 375691 agtggctgactgcggggggagtgggacagggattgacgggga---cggggtgtg-----agagaatgctctgggacagtggtcacgttctctattttgatagcagcctgggttgcacaagcctgcgtgtttatctgagctcatcagatggagcaggtaagatttgtgtatttcgtt-g s ponAbe2.chr17 207026 170 + 73212453 agtggctgactgcggggggagtgggacagggactgacgcgga---cggggtgtg-----agagaatgctctgggacggtggccacattctctattctgatagcagcctgggctgcacaagcctgcgtgtctatctgagctcatcagatggaacaggtaagatttgtgtatttcatttg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 313571 167 - 81552678 agtggctgactgc-aggggagtgggacagggattgacg-gga---cggcgtgtg-----agagaatgctctgggatggtggtcacgttctctattttgatagcagcctgggttgcacaagcctgcatgtttatctgagctcatcagatggaacaggtaagatttgtgtatttcatt-g i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 240364 169 + 80904711 agtggctgactgcggggggagtgggacagggattgatgggga---cggggtgtg-----acagaatgatcagggactgtggtcatgttctctattttgataggagcctgggttgcacaagcccgcatgtttatctgagctcatcagatgcaacaggtaagatttgtgtatttcatt-g i rheMac3.chr16 C 0 C 0 s macFas5.chr16 248053 169 + 80997621 agtggctgactgcggggggagtgggacagggattgatgggga---cggggtgtg-----acagaatgatcagggactgtggtcatgttctctattttgataggagcctgggttgcacaagcccgcatgtttatctgagctcatcagatgcaacaggtaagatttgtgtatttcatt-g i macFas5.chr16 C 0 C 0 s papAnu2.chr16 226043 165 + 74645514 AGTGGCTGACTGC-GGGGGAGT-GGACAGGGATTGATGGGGA---CGGGGTGTG-----ACAGAATGATCTGGGGCCGTGGTCATGTTCTCTATTTTGATAGGAG-CTGGGTTGCACAAG-CTGCGGGTTTATCTGAGCTCATCAGATGCAACAGGTAAGATTTgtgtatttcatt-g i papAnu2.chr16 T 53 C 0 s calJac3.chrUn_GL286409 1037651 152 - 1291538 agtggctgcctgc--agggggtgggacaggaagtgacgggaaagtcggggtgggggggtggggagtgctgtggga---tggtcatgttctctatgttgacaggaacctgggtttcacgagcctgcacatttatctgagtttatcaga-ggaacaggta-------------------- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e chlSab2.chr16 214546 1205 + 75148670 I e panTro4.chr17 331104 3696 + 82630442 I a score=228676.000000 s hg38.chr17_GL383563v3_alt 349043 109 + 375691 catgcatgttttaccatggaagaaaaataccataaacaactactga--actttagttcatggt--aagcttactgaagcatttGACTAttttgttcaaaagatgcattaagat s panTro4.chr17 334800 109 + 82630442 CATGCATGTTTTTCCATGGAAGAAAAATACCATAAACAACTACTGA--ACTTTAGTTCATGGT--AAGCTTACTGAAGCATTTGACTAttttgttcaaaagatgcattaagat i panTro4.chr17 I 3696 C 0 s ponAbe2.chr17 207196 112 + 73212453 catgcatgttttaccatggaag-aaaataccataaacaactactgactgactaacttcatggtaaaagcttactgaagcatttGACTGttttgttcaaaagatgcattaagac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 313738 109 - 81552678 catgcatgttttaccatggaagaaaaataccataaacaactaatga--actttagttcatggt--aagcttaccgaagcatttGACTAttttgttcgaaagatgcattaacat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 240533 109 + 80904711 tatgcacattttactatggaagaaaaataccataaacaactactga--actttagttcgtggt--aagcttactgaagcattCGACTAttttgttcaaaagatgcattaagag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 248222 109 + 80997621 tatgcacattttactatggaagaaaaataccataaacaactactga--actttagttcgtggt--aagcttactgaagcattCGACTATTTTGTtcaaaagatgcattaagag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 226208 109 + 74645514 tatgcatGTTTTACCATGGAagaaaaataccataaacaaCTACTGA--ACTTTAGTTTGTGGT--AAGCTTACTGAAGCATTCGACTATTTTGTTCAAAAGATGCATTAAGAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1037803 93 - 1291538 ----------------tgaaagaaaaatatcatcaacaaatactga--actttagttcatggt--aagtttactgaagtatttGACTAttttgttcaaaagatgcattaagac i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e chlSab2.chr16 214546 1205 + 75148670 I a score=787700.000000 s hg38.chr17_GL383563v3_alt 349152 294 + 375691 agataaaaagcaagccacaaactgagagacatatttgcagcataatagacatctgatt-agtaccagtacgcggacatacggagatctcctacaaatcaataataatctaaaagggaaaaaatggg-taaaGAAAAGTGCAGTGTGCAGATGAGCTAATACTTCAAGTCAGTTAGGGAAAGAgaa--ggatacctcaaatctagtaacaccagttcctggacccgaaaggctgagggataaaggaggaggaagactctcaccatttgcctttttacacctttagaattttaaatgaca s panTro4.chr17 334909 294 + 82630442 agataaaaagcaagccacaaactgagagacgtatttgcagcataatagacatctgatc-agtactagtacgtggacatacggagatctcctacgaatcagtaataatctaaaagggaaaaaatggg-caaaGAAAAGTGCAGTGTGCAGATGAGCTAATACTTCAAGTCAGTTAGGGAAAGAgaa--ggatacctcaaatctagtaacaccagttcctggacccgaaaggctgagggataaaggaggaggaagactctcaccatttgcctttttacacctttagaattttaaatgacg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 207308 294 + 73212453 agacaaaaagcaagccacaaacggagagaagtatttgcagcctaatagacatctgatt-agtaccagtacgtggacatatggagatctcctacgaatcaataataaTCTAAAAGGGAAAAAATGTG-TAAAGAAAAGTGCAGTGTGCAGATGAGCTAATACTTCAAGTCAGTTAGGGAAAGAGAA--GGATACCTCAAATCTAGTAACACCAGTTCCTGGACCCAAAAGGCTGAGGGATAAAGGAGGAGGGAGACTCTCACCATTTGCCTTTTTGTACCTTTAGAATTTTAAATGACA i ponAbe2.chr17 C 0 I 9 s nomLeu3.chr19 313847 292 - 81552678 agataaaaagcaagccacaaacccagcaa-gtatttgcagcataacagacatctgatt-agtaacagtatgtggatatacggagatctcctatgaatcagtaataatctaaaagggaaaaaatggg-taaagaaAAGCGCAGTG---AGATGAGCTAATACCTCAAGTCAGTTAGGGAAAGAGAgacggataacccaaatctagtaacaccagttcctggacccgaaaggctaagggataaaggaggaaggagactctcaccatttgcctttttatacctttagaattttaaatgaca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 240642 294 + 80904711 agataaaaagcaagccacaaactcagagacgtatttgcagcataacaggcgtctgattaagtaccagtacgtgggcatacggagatcgcctatgaatcagtaataatctaaaagggaaagaatggg-taaa-aaaAGCACAGTGTGCAAATGAGTTAATATTTGAAGTCAGTTAGGGAAAGAGAgaaggaaaccccaaatctagtaacatcagttcctggactggaaaggctaagggataaaggaggagggaga--ctcaccatttgcgtttttatacctttagaattttaaaTGAGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 248331 294 + 80997621 agataaaaagcaagccacaaactcagagacgtatttgcagcataataggcgtctgattaagtaccagtacgtggacatacggagatcgcctatgaatcagtaataatctaaaagggaaagaatggg-taaa-aaaAGCACAGTGTGCAAATGAGTTAATATTTGAAGTCAGTTAGGGAAAGAGAgaaggaaaccccaaatctagtaacatcagttcctggactggaaaggctaagggataaaggaggagggaga--ctcaccatttgcctttttatacctttagaattttaaatgaga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 226317 295 + 74645514 AGATAAAAAGCAAGCCACAAACTGAGAGACGTATTTGCAGCATAATAGGCGTCTGATTAAGTACCAGTACGTGGACATACGGAGAACACCTACGAATCAGTAATAATCTAAAAGGGAAAGAATGGGTTaaa-aaaaGCACAGTGTgcaaatgagttaatatttgaagtcagttagggaaagagagaaggaaacccCAAATCTAGTAACATCAGTTCCTGGACTGTAAAGGCTAAGGGATAAAGGACGAGGGAGA--CTCACCatttgcctttttatacctttagaattttaaatgaga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 215751 293 + 75148670 agataaaaagcaagccacaaactgagagacgtatttgcagcataataggcatccgattaagtaccagtacgtggacatacggagatcgcctacgaatcagtaataatctaaaagggaaagaatggg-taaa-aaaAGCACAGTGTGCAAATGAGTTAATATTTGAAGTCAGTTAGGGAAAGAGAGAAGGAAACCCCAAATCTACTAACATCAGTTCCTGGACTCGAAAggctaagggataaaggaggagggaga--ctcaccatttgcctttttatacctttagaatttt-aatgaga i chlSab2.chr16 I 1205 I 4 s calJac3.chrUn_GL286409 1037896 292 - 1291538 agttagaaagcaagccacaaactgagagaagtatttgcagcttaataggtgtgagatt-agggctaatacgtgaacatatggcgatctcccatgaatcagtaataatctaataaagaaaaaatggg-taaaGAAAACTGCAGTGTGCAAATGGGCTAATATTTCAAGTCACTTAGGGAAAGAGGGAAGGATACC-CAAATCTAGAAACACCAGTTCCTGGACCCGAAAGGCTGAGAAATAAAGGAGGA---AGACTCTTCCCATTTGTCTCTTCGTACCTTTAGAATTTTAAATGACA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I a score=1497.000000 s hg38.chr17_GL383563v3_alt 349446 7 + 375691 tgatttt s panTro4.chr17 335203 3 + 82630442 tga---- i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 314139 7 - 81552678 tgatttt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 240936 7 + 80904711 ttattta i rheMac3.chr16 C 0 I 2 s macFas5.chr16 248625 7 + 80997621 ttattta i macFas5.chr16 C 0 I 2 s papAnu2.chr16 226612 7 + 74645514 ttattta i papAnu2.chr16 C 0 I 2 s chlSab2.chr16 216048 7 + 75148670 ttattta i chlSab2.chr16 I 4 I 2 s calJac3.chrUn_GL286409 1038188 3 - 1291538 TAA---- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e ponAbe2.chr17 207602 9 + 73212453 I a score=1291376.000000 s hg38.chr17_GL383563v3_alt 349453 466 + 375691 tttttttttttgagacagagtctcgctctgttgccaatgctggggagcagtggtgcaatctt-gctcactgaaacctctgcctcccaggctcaagcaattctcttgcctcagcctccagagtatctgggatgacaggtgccagccaccacacccagctaatttttgtatttttagtagagatggggtttagtagagatggggatgaccatgttggccaggctggtattggactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggatgacaggcgtaagccactgcacccggccCCTTAAATGACATGCTCATAATGTATCTTCCAAAAATAAATTAAATTTAAGTTTAAAATACAGCTTGTGGGCAaagaaagtgaactgaaataataggtcaacaatttggaaagaaagaaaatcgaggtcttcccttccatcacaaaacaaaataaattt s panTro4.chr17 335206 464 + 82630442 -ttttttttttgagacagagtctcactctgttgccaatgctggggtgcagtggtgcaatgtt-gctcactgaaacctctgcctcccaggctcaagcaattctcttgcctcagcctccagagtagctgggatgacaggtgccagccaccacacccagctaatttttgtatttttagtagagatggggtttagtagagatggggatgaccatgttggccaggctggtattggactcctgacctcaggtgatccgcccgcctcgacctcccaaagtgctgggatgacaggcgtgagccactgcacccggccCCTTAAATGACATGCTCATAATGTATCTTCCaaaaataaattaaatttaagtttaaaataCAGCTTGTGGGCAAAGAAAGTGAACTGAAATAATAGGTCAACAATTTGGAAAGAAAGAAAATCGAGGTC-AAGGTTCCATCACAAAACAAAATAAATTT i panTro4.chr17 C 0 T 24586 s ponAbe2.chr17 207611 450 + 73212453 tttttttttttgagacagagtctcactctgttgccagtgctagggtgcagtggtgccatctt-gctcactgagacctctgcctcccaggctcaagcaattctcttg-ctcagccttcagagtagctgggatgacaggtgccagccaccacacccagctaatttttgtatttttagtatagatggggtttc---------------accatgttggccaggctggtactggactcctgacctcaggtgatccgcctgcctcggcctcccaaagtgctgggatgacaggtgtgagccactgcacccggccCCTTAAATGACATGATTATAATGTATCTTCCaaaaataaattaaatttaagtttaaaataCAGCTTGTGGGCAAAGAAAGTGAACTGAAATAATAGGTCAACAATTTGGAAAGAAAGAAAATCAAGGTCTTCCCTTCCATCATAAAACAAAATAAATTT i ponAbe2.chr17 I 9 C 0 s nomLeu3.chr19 314146 443 - 81552678 ---ttttttttgaaacagagtcttactctgttgccaatgctggggtgcaggggtgcgatctt-gctcactgaaacctctgcctcccaggctcaagcaattctcttgcctcagcctccagagtagctggaatgacaggtgccagccaccacacccaggtgatttttgtatttttattagagatggggtttc---------------accatgttggccaggctggtattggactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggatgacaggcgtgagccactgcatccggccCCTTAAATGACGTGATTATAATGTGTCTTCCAAAAATAAATTA-----AAGTTTAAAATACAGCTTGTGGGCAAAGAAAGTGAACTGAAATAATAGGTCAACAATTTGGAAAGAAAGAAAATGCAGGTCTTCCCTtccatcataaaacaaaataaattt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 240945 449 + 80904711 tatgtatttttgagac--agtctcactctgttgccaatgctggggtgcagtggtgccatctc-actcactgaaacctccacctcccagactcaagcaattctcttgcctcagcctcccgagtagctgggatgacgggagcctgccaccacagccagctaatttttgtatttttagtagaaatgaggtttc---------------accacgttggccaggctggtcttggactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggatgacaggcgtgagccactgtacccggccCCTTAAATGACATGATTATAATGTATCTTCCAAAAATAAACTGAATTTAAGTTTAAAATACAGCTTGTGGGCAGACAAAGTGAACTGAAATAATAGGTCAACAATCTGGAAAGAAAGAAAATCAAGGTCTTCCCTTCCATCATAAAACAAAATAAATTT i rheMac3.chr16 I 2 C 0 s macFas5.chr16 248634 449 + 80997621 tatgtatttttgagac--agtctcactctgttgccaatgctggggtgcagtggtgccatctc-actcactgaaacctccacctcccagactcaagcaattctcttgcctcagcctcccgagtagctgggatgacaggagcctgccaccacagccagctaatttttgtatttttagtagagatgaggtttc---------------gccacgttggccaggctggtcttggactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggatgacaggcgtgagccactgtacccggccccttaaatgacatgattataatgtatcttccaaaaataaaCTGAATTTAAGTTTAAAATACAGCTTGTGGGCAaacaaagtgaactgaaataataggtcaacaatctggaaagaaagaaaatcaaggtcttcccttccatcataaaacaaaataaattt i macFas5.chr16 I 2 C 0 s papAnu2.chr16 226621 449 + 74645514 tatgtatttttgagac--agtgtcactctgttgccaatGCTGGGGTACCGTGGTGCCATCtc-actcactgaaacctccacctcccagactcaagcaattctcttgcctcagcctccagagtagctgggatgacaggtgcatgccaccacagccagctaatttttgtatttttagtagagatgaagtttc---------------gtcatgttggccaggctggtcttggactcctgacctcaggtgatccacccacctcggcctcccgaagtgctgggatgacaggcgtgagccactgtacccggcccttTAAATGACATGATTATAATGTATCTtccaaaaataaactaaatttaagtttaaaatacagCTTGTGGGCAAACAAAGTGAACTGAAATAATAGGTCaagaatctggaaagaaagaaaatcaaggtCTTCCCTTccatcataaaacaaaataaattt i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 216057 449 + 75148670 tatgtacttttgagac--agtctcactctgttgccaatgctggggtgcagcggtgccatctc-gctcactgaaacctccgcctcccaggctcaagcaattctcttgcctcagcctccagagtagctgggatgacaggtgccagccaccacatccagctaatttttgtatttttagtagagatgaggtatc---------------gccatgttggccaggatggtcttggactcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgggatgacaggcgtgagccactgtacccggccccttaaatgacatgattataatgtatcttccaaaaataaaCTGAATTTAAGTTTAAAATACAGCTTGTGGGCAaacaaagtgaactgaaataataggtcaacaatctggaaagaaagaaaatcaaggccttcccttccatcgtaaaacaaaataaattt i chlSab2.chr16 I 2 C 0 s calJac3.chrUn_GL286409 1038191 445 - 1291538 --tttttttttgatacagagtctcgctctgttgcccaggctggagtgcagtggtgcaagctcagctcagtgaaacctgcatctcccaggctcaagcgattctcctgcgttagcctccagagtagctgagattacaggtgtgccccaccacacccagctaacttttgtatttttagtagagacagggtttc---------------accatgttggtcaggctggtcttgaactcctgacctcaagtgattcacccgcctccgtctcccaaagtgctgggatgtcaggtatgagccactgcatccggccCCTTAAATGACATGATTATAATGTATCTTCCAAAAATAAA-----TTTAAGTTTAAAATACAGTTTGTGGGCAAAGAAAGTGAACTGAAAGAACAGGTCAACAACTTGGAAAGAAAGAAAATGAAGGTCTTCCCTTCCATCATAAAACAAAATAAATAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I a score=947964.000000 s hg38.chr17_GL383563v3_alt 349919 470 + 375691 tgattggattagcattgaaagtcaaagag--agctgaatggaaaggctgaaaccaaaaaagaacctgaagaaaatatagaactgaa----catttatctgaacttggggtgaggaaaacgtttcaaaccccaaaacagagggtttttgaaaaatcataagatgaaaagactgatggacttaaTGAAATGCAttagtcagttcaggctgccatgaaata-tgcagaca----------------------------gggcggcttacacagctggcatttc-ttctcacagtcctggaggc-tggggagtccaagatcaaggtgccagctggctccgattatggcgaggcctctcct--------------------------------cctggcttgtggacatgg---------tgag-----ggcccaggggaaggg------agagacagagacagagagagtggggagaagagggggagagagagagcaaga-gagagagagaaggagagagaaagaga-gagggagagagagattgagaaaaggagagagag---------------acag s ponAbe2.chr17 208061 466 + 73212453 TGATTGGATTAGCACTGAAAGTCAAAGag--agctgaatggaaaggcggaaaccaaaaaagaacctgaagaaaaca--gagctgaa----cgtttatctgaccttggggtgaggaagacctttcaaacccaaaaacagagggtttttgaaaaatcataaaatgaaaagactgatggacttaaTGAAATGCAttagtcagctcaggctgccatgaaata-ttcagaca----------------------------gggcggcttacacagctggcatttc-ttctcacagtcctggaggc-tggggagtccaagatcaaggtgccagctggctccgattctggcgaggcctctcct--------------------------------tctggcttgtggacatgg---------tgag-----ggcccaggggaaggg------agagacagagacagagagagtggggagaagagggggagagagaaagcgaga-gagagagagaaggagagagaaaggga-gagggagagagagattgagaaaa--agagagag---------------acag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 314589 469 - 81552678 tgattggattagcattaaaagtcaaagag--agctgaatggaaaggctgaaaccaaaaaagaacctgaagaaaaca--gagctgaa----catttatcttaccttggggtgaggaagacctttcaaacccaaaaacagagggtttttgaaaaatcataaaatgaaaagactgatggacttaatcaaatGCAttagtcagctcaggctgccatgaaata-tgcagaca----------------------------gggcagcttacacagctggcatttctttctcacagtcctggaggc-tggggagtccaagatcaaggtgccagctggctctgattctggtgaggcctctcct--------------------------------cctggcttgtggacatgg---------tgag-----ggcccaggggaagga------agagacagagacagagagagtagggggAagagggggagagagagagtgaga-gagagagagaaggacagaggaaggga-gagggagagagagattgagaaagagagagagag---------------acag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 241394 475 + 80904711 TGATTGGATTAGCATTGAAAGTCAAAGag--agctgaacggaaaggctgaaatcaaaaaagaacctgaagaaaaca--gagctgaa----tatttatctgaccttggagtgaggaagacctttcaaacccaaaaacagagggtttttggaaaatcataaaatgaaaagactgatggacttaatcaaatGCAttagtcagctcaggttgccatgaaatacctcaggcag---------------------------gggtgcctgacacagctggcatttctttcccacagtcctggaggc-tggggagtccaagatcaaggtgccagctggctacaattctggcgagggctctcct--------------------------------cctgccttgcggacatgg---------tgag-----ggcccaggggaaggg------agagacagagacagagagagt-gggggAAGCAGGGgagagagagagagagagaggagagagaaagggagagaaaggga-gagggagagaaagactgagaaagagaaagagag---aaagag--------ag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 249083 514 + 80997621 tgattggattagcattgaaagtcaaagag--agctgaacggaaaggctgaaatcaaaaaagaacctgaagaaaaca--gagctgaa----tatttatctgaccttggagtgaggaagacctttcaaacccaaaaacagagggtttttggaaaatcataaaatgaaaagactgatggacttaatcaAAtgcattagtcagctcaggttgccatgaaatacctcaggca----------------------------gggtgcctgacacagctggcatttctttcccacggtcctggaggc-tggggagtccaagatcaaggtgccagctggctacagttctggcgagggctctcctcctggcttgccgacatggcgagtgcctctccgcctgccttgtggacatgg---------tGAG-----GGCCCAGGGGAaggg------agagacagagacagagagagt-gggggaagcaggggagagagagagggagagaggagagagaaagggagagaaaggga-gagggagagagagactgagaaagagaaagagag---aaagtgagagagacag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 227070 540 + 74645514 tgattggATTAGCATTGAAAGTCAAAGAG--AGCTGAATGGAAAGGCTGAAATCAAAAAAGAACCTGAAGAAAACA--GAGCTGAA----TATTTATCTGACCTTGGAGTGAGGAAGACCTTTCAAACCCAAAAACAGAGGGTTTTTGgaaaatcataaaatgaaaagacTGATGGACTTAATCAAATGCATTAGTCAGCTCAGGTTGCCATGAAATACCTCAGGCAGGGCGGCTGCCACAAAATACCTCAGGCAGGGTGGCTGACACAGCTAGCATTTCTttcccacagtcctggaggc-tggggagtccaagatcaaggtgccagctggCTCCGATTCTGGCGAGGGCTCTCCTCCTGGCTTG-CGACATGGCGAAGGCCTCTCCTCCTGCCTTGCGGACATGG---------Tgag-----ggcccaggggaaggg------agagacagagacagacagagt-gggggaagcgggggagagagagaga-----aggagagagaaagggagagaaagggatgaggaagagagagactgagaagagagaagagagagaagagagagagagagag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 216506 517 + 75148670 tgattggattagcactgaaagtcaaagag--agctgaatggaaaggctgaaatcaaaaaagaacctgaagaaaaca--gagctgaa----tatttatctgaccttggagtgaggaagacctttcaaacccaaaatcagagggtttttggaaaatcataaaatgaaaagactgatggacttaatcaAAtgcattagtcagctcaggttgccacgaaatacctcaggca----------------------------gggtggctgacacagctggcatttctttcccacagtcctggaggc-tggggagtccaagatcaaggtgccaggtggctccgattctggcgagggctctcctcctggcttg-cgacatggcgagggcctctcctcctgccttgtggacatgg---------tGAG-----GGCCCAGGGGAagggagagacagagacagagacagagagagtggggggaagcaggggagagagagagaga---aggagagagaaagggagagaacggga-gagggagagagagactaagagaaagagagaaag---agagagagagagagag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1038636 484 - 1291538 TGATTGAATTAGCATTGAAAGTCAAAGAGAAAGCTGAATGGAAAGGCTGGAACCAAAAAAGAACCTG-----AACA--GAGCTGAATATTTATTTATCTCACCTTGGCGTGAGAAAGAC-TTTCAAACCCAAAAACAGAGAGTTTTTGAAAAATCATAAAATGGAAAGACTGATATACCTCATCAAATGCACtggtcagctcaggctgccataaaataccacagaca----------------------------gggcagcgtcaacaactgccattccttcctcacagtcctagaggcttgtagattccaagatcaaggtgccagctggctctggttctgttgagggctctccc--------------------------------cctggc-tgtggacatggccttTCCTTTGAGCACCAGGCCCagggagaggg------agagacagagagagtcagggg-ggaagaaatggcggcggg------------gagagggagagagagagggatggggg-gggagagagagagactgagaaagagagtaaagg---agaaagagagagaCAG i calJac3.chrUn_GL286409 C 0 M 409 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e panTro4.chr17 335670 24586 + 82630442 T a score=71046.000000 s hg38.chr17_GL383563v3_alt 350389 46 + 375691 agattgagaaagagaaagagagattgacaaagggagagagaggcga s ponAbe2.chr17 208527 44 + 73212453 agattgagaaagaggaagata--ttgacaaagggagagagagGCAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315058 46 - 81552678 aggttgagaaagagaaagagagattgacaaagggagagagagGCAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 241869 46 + 80904711 agactgcgaaagagaaagagagattgagaaaggcagagagaggcaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 249597 46 + 80997621 agactgagaaagagaaagagagattgagaaaggcagagagaggcaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 227610 46 + 74645514 agactgagaaagagaaagagagattgagaaaggcagagagaggcaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 217023 44 + 75148670 agactgagaaagagca--agagattgagaaaggcagagagaggcaa i chlSab2.chr16 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e calJac3.chrUn_GL286409 1039120 409 - 1291538 M e panTro4.chr17 335670 24586 + 82630442 T a score=872757.000000 s hg38.chr17_GL383563v3_alt 350435 426 + 375691 ggcgcagtgtctcgtgcctgtaatcctagca-ctttgggaggccgaggtgggagggttgcctgagcccaggagatggagaccagcctgggcaac-acagcaaaaccccatctctgttat---aaaacatt---ttttttcagt----ttaaaaagagagagagagagagagattgacaaagagagaggttgagaaagagagagtggg-------gagagGGGAGGGGGatggggaaggggagggag--agcgctctccagcatctgtgtttatacggacactaacgt--att----gcatcagggccccacctttctgacctcatttaaccttaattacttcctgactccacacacagctgcactaggggtgaacgccacaacccaggaatactg-gggaacacaaacgttcagtctgtaTTACCACATAAACATTTAAACCTTCTCTATGTTT s ponAbe2.chr17 208571 428 + 73212453 ggcgcagtggctcgtgcctgtaatcccagcaagtttgggaggccgaggtgggagggttgcctgagcccaggagatggagaccagcccgggcaac-acggcaaaaccccatctctgttat---aaaaaaaT---TTTTTTCAAT----TTaaaaagagagagagaga------ttgacaaagagtgaggttgagaaagagagagtgggcagtgggaagagaggaggagGatggggaaggggagggag--agcgctctccagcatctgtgtttatacggacactaatgt--atc----gcatcagggccccacctttctgacctcatttaatcttaattacttcctgactccacacacagctgcactaggggtgaacgccacaacccaggaacgttg-gggaacacaaatgttcggtctgtaTTACCACATAAACATTTAAACCTTCTCTATGTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315104 430 - 81552678 GG-gcagtggctcgtgcctgtaatcccagca-ctttgggaggccgaggtgggagggttgcctgagcccaggagatggagaccagcccaggcgacaatggcaaaacaacatctctgttataaaaaaaaaTT---TTTTTTTAAT----TTAAAAagagagagagaga------ttgacaaagagagagggtgagaaagagagagTGGGGAGTGGGGATAGGGGAGGGGGatggggaaggggagggag--agcgctctccagcatctgtgtttatatggatactaatgt--atc----gcatcagggccccacctttctgacctcatttaaccttaattacttcctgactccacacacagctgcactaggggtgaacgccacaacccaggaatgttg-gggaacacaaatgttcagtctgtaTTACCACATAAACATTTAAACCTTCTCTATGTTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 241915 415 + 80904711 ggcggagagactgctgcctgtaatcccagca-ctctgggaggccgaggtgggatggttgcctgagcccaggagatggagaccagccccagcaac-acggcaaaaccccatctctGTTAA--------TTTTTGTTTTTTTTTT----TTaaagagagagaga----------ttgacaaagagagaggttgagaaagagagagTGGGGAGTGGGAAAAGAGGAg------ggggaaggggaaggag--aacgccctccagcatctgcgtttatacggacactaatat--atc----acatcagggccccacctttctgacctcatttaaccttaattacttcctgactccacacacagctgcactaggggtgagcgccacaacccaggaatgttg-gggaacacaaacattcagtctgtaTTACCACACAAACATTTAAACTTACTCTATGatt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 249643 413 + 80997621 ggcgcagtggctcatgcctgtaatcccagca-ctctgggaggccgaggtgggagggttgcctgagcccaggagatggagaccagccccagcaac-acggcaaaaccccatctctgttaa--------aTTT--TTTTTTTTTT----TTAAagagagaaaga----------ttgacaaagagagaggttgagaaagagagagtggggagtggggaaagagGAg------ggggaaggggaaggag--aacgccctccagcatctgcgtttatacggacactaatat--atc----acatcagggccccacctttctgacctcatttaaccttaattacttcctgactccacacacagctgcactaggggtgagcgccacaacccaggaatgttg-gggaacacaaacattcagtctgtaTTACCACACAAACATTTAAACTTTCTCTATGTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 227656 412 + 74645514 ggcgcagtggctcatgcctgtaatcccagca-ctctgggaggccgaggtgggagggttgcccgagcccaggagatggagaccagccccagcaac-acggcaaaaccccatctctgttaa--------ttt---tttttttttt----ttaaagagagagaga----------ttgacaaagagagaggttgagaaagagagagtggggagtggggaaagaggag------gggaaaggggaaggag--aacgCCCTCCAGCATCTGCGTTTATACGGACACTAATAT--ATC----ACATCAGGGCCCCACCTttctgacctcatttaaccttaattacttcctgaCTCCACACACAGCTGCACTAGGGGTGAGCGCCACAACCCAGGAATGTTG-GGGAACACAAACGTTCAGTCTGTATTACCACACAAACATTTAAACTTTctctatgttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 217067 416 + 75148670 ggcgcagtggctcatgcctgtaatcccagca-ctctgggaggccgaggtgggagggttgcctgagcccaggagatggagaccagccccagcaac-acggcaaaaccccatctctGTTAT--------AAC---TTTTTTTTTTAAAAAAAAagagagagaga----------ttgacaaagagagaggttgagaaagagagagtggggagtggggaaagagGAg------ggggaaggggaaggag--agcgccctccagcatctgtgtttatagggacactgatgt--atc----acatcagggccccacctttctgacctcatttaaccttaattacttcctgactccacacacagctgcactaggggtgagcaccacaagccaggaatgttg-gggaacacaaacgttcagtctgtaTTACCACACAAACGTTTAAACTTTCTCTATGTTT i chlSab2.chr16 C 0 I 344 s calJac3.chrUn_GL286409 1039530 419 - 1291538 ggagcagtggctcatgcctgtaatcccaaca-ctttgggaggctgaggtgggaggcttgcctgagccctggaggaagaggccagcctgggcaac-atgacaaaactccatctctgctat---aaaaaaat---aTTTTTAATT----TAAAAGAGAGAGAGA----------TTGAC----AGAGAGGTTGAGAAAGAGAATGCGGGTAGTGG-CAGGGGGGAG------AAggaagggggaggggccagagctctccagcatct--gtttatagggacacaaatctgaatctgatgggtcagggccccaactttctgacctcgtttattcttaattacttcctgactccacacacagctacactaggggtgagcactacaacccaggaatgctgagggaacacaaacgttcagtctgtaataCCACATAAACATTTAAAACTTCTCTGTGTTT i calJac3.chrUn_GL286409 M 409 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e panTro4.chr17 335670 24586 + 82630442 T a score=7644.000000 s hg38.chr17_GL383563v3_alt 350861 3 + 375691 AAA s ponAbe2.chr17 208999 3 + 73212453 AAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315534 3 - 81552678 AAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 242330 3 + 80904711 aaa i rheMac3.chr16 C 0 I 330 s macFas5.chr16 250056 3 + 80997621 aaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 228068 3 + 74645514 aaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 217827 3 + 75148670 aaa i chlSab2.chr16 I 344 C 0 s calJac3.chrUn_GL286409 1039949 3 - 1291538 AAA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e panTro4.chr17 335670 24586 + 82630442 T a score=2548.000000 s hg38.chr17_GL383563v3_alt 350864 1 + 375691 A s ponAbe2.chr17 209002 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315537 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 242663 1 + 80904711 A i rheMac3.chr16 I 330 C 0 s macFas5.chr16 250059 1 + 80997621 a i macFas5.chr16 C 0 C 0 s papAnu2.chr16 228071 1 + 74645514 a i papAnu2.chr16 C 0 I 347 s chlSab2.chr16 217830 1 + 75148670 A i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1039952 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e panTro4.chr17 335670 24586 + 82630442 T a score=10976.000000 s hg38.chr17_GL383563v3_alt 350865 6 + 375691 ATAATC s ponAbe2.chr17 209003 6 + 73212453 ATAATC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315538 6 - 81552678 ATAATC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 242664 6 + 80904711 ATAATC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 250060 6 + 80997621 ataatc i macFas5.chr16 C 0 I 330 s papAnu2.chr16 228419 6 + 74645514 ataatc i papAnu2.chr16 I 347 C 0 s chlSab2.chr16 217831 6 + 75148670 ATAATC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1039953 5 - 1291538 ATGAT- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e panTro4.chr17 335670 24586 + 82630442 T a score=203192.000000 s hg38.chr17_GL383563v3_alt 350871 100 + 375691 GTAATACTTGGTATGCAACAAGATCTTTAAAAAGAGAAAAATAACCAAAGAAAAATGCCAAAAGGAGGGGAAAAATGTTTGTTACATATGTCAGTCAATA s ponAbe2.chr17 209009 100 + 73212453 ATAATACTTGGTATGCAACAAGATCTTTAAAAAGAGAAAAATAACCAAACAAAAATGCCTAAAGGAGGGAAAAAATGTTTGTTACATATGTCAGTCAACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315544 100 - 81552678 ATAATACTTGGTATGCAACAAGATCTTTAAAAAGAGAAAAATAACCAAACAAAAATGCCAAAAGGAGGGAAGAAATGTTTGTTACATATGTCAGTCAACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 242670 100 + 80904711 ATAATACTTGGTATACAACAAGATCTTTAAAAAGAGAAAAATAACCAAAGAAAAATGCCAAAAGAAGGGAAAAAATGTTTGTTACATGTGTCAGTCAACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 250396 100 + 80997621 ACCATACTTGGTATACAACAAGATCTTTAAAAAGAGAAAAATAACCAAAGAAAAATGCCAAAAGGAGGGAAAAAATGTTTGTTACATATGTCAGTCAACA i macFas5.chr16 I 330 C 0 s papAnu2.chr16 228425 100 + 74645514 ataatactTGGTATACAACaagatctttaaaaagaaaaaaataaccaaagaaaaatgccaaaaggagggaaaaaatgtttgTTACACATGTCAGTCAACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 217837 100 + 75148670 ATAATACTTGGTATACAACAAGATCTTTAAAACAAAAAGAATAATCAAAGAAAAATGACGAAAGGAGGGAAAAAATGTTTGTTACATATGTCAGTCAACA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1039958 77 - 1291538 -----ATTTTGTATGCAACAAGATCTCAAAAAAG----------------AAAGATGCAAAAAGGAGGG--AAAATGTTCATTACAGATCTCAGTCAATA i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15783730 9331 - 61074082 I e panTro4.chr17 335670 24586 + 82630442 T a score=92785.000000 s hg38.chr17_GL383563v3_alt 350971 41 + 375691 TAGAGAAATCAACGCAGGTTACCAAATCATGTCTAC-AGTAT s ponAbe2.chr17 209109 41 + 73212453 TAGAGAAATCAACGCAGTTTATCAAATCATGTCTGT-AGTAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315644 41 - 81552678 TAGAGAAATCAACACAGGTTATCAAATCATGTCTGT-AGTAT i nomLeu3.chr19 C 0 I 262 s rheMac3.chr16 242770 42 + 80904711 TAGAGAAGTCAATGCAGGTTACCAAATCATGTCTATAAGTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 250496 42 + 80997621 TAGAGAAGTCAATGCAGGTTATCAAATAATGTCTATAAGTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 228525 42 + 74645514 TAGAGAAGTCAATGCAGGTTATCAAATCATGTCTATAAGTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 217937 42 + 75148670 TAGAGAAATCAATGCAGGTTATCAAATCATGTCTATAAGTAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1040035 39 - 1291538 AAGGGAAATAAATGCAGGTTATCCAATCATGTCTGT---TAT i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15793061 41 - 61074082 taaaaaaTAAAATACAGGTTATAAAATCatttatat-agaat i canFam3.chr9 I 9331 C 0 e mm10.chr11 75956531 5033 + 122082543 I e panTro4.chr17 335670 24586 + 82630442 T a score=285499.000000 s hg38.chr17_GL383563v3_alt 351012 136 + 375691 CATCTCCATTTTTAAGCAgtaaacactggctatctctggaggttgggaatcacggatttttattttcctctttgtgcttt-ctgcattttctaaattttccacaatgaacatgaattacttttataatttaaaaaa-a- s ponAbe2.chr17 209150 136 + 73212453 CATCTTCATTTTTAAGCAgtaaacactggctatctctggaggctgggaatcacggatttttattttcttctttgtgcttt-ctgtattttctaaattttccataataaacatgaattacttctataattttaaaaa-a- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 315947 133 - 81552678 CATCTCCATTTTTaaacggtaaacactggctatctctggaggttgggaatcatggatttttattttcttctttgtgcttt-ctgtattttctaaattttccacaataaacatgaattaatt-tataattt--aaaa-a- i nomLeu3.chr19 I 262 C 0 s rheMac3.chr16 242812 127 + 80904711 CATCTCCA-TTTTAAACAgtaaacactgtctatctctggagattgggaatcatagctttttattttcttctttgtgct--------ttttctaaattttccccaatgaacatgaattacttttataattcaaaaaa--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 250538 127 + 80997621 CATCTCCA-TTTTAAACAgtaaacactgtctatctctggagattgggaatcatagctttttattttcttctttgtgct--------ttttctaaattttccccaatgaacatgaattacttttataattcaaaaaa--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 228567 127 + 74645514 CATCTCCA-TTTCAAACAGTAAACACTGGCTATCTCTGGAGATTGGGAAtcatagctttttattttcttctttgtgct--------ttttctaaattttccccAATGAACatgaattacttttataattcaaaaaa--- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 217979 129 + 75148670 CATCTCCATTTTTaaacagtaaacactggctatctctggagattgggaatcatagcttttgattttcttctttgtact--------ttttctaaattttccacaatgaatatgaattacttttataattcaaaaaaa-- i chlSab2.chr16 C 0 I 322 s calJac3.chrUn_GL286409 1040074 124 - 1291538 CATCTGCATTTTTAAAAGGTAAACACTGGTTATCTCTGGAGGTTGAAAATCACAGATTTTTATATTCTTCTTTGTGCT------------CTAAATTTTCCACAATG-ACATGAATTACATTTATAATTCAAAAAA-A- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15793102 131 - 61074082 gatctcaatttttaaacattaaaaac-agctatttctgggggttgagaatcactggctcttattttc----ttgtgttttggtgtatttcctaaa-tttccacagtgaatatgaattatgtttataattcaaaaga--c i canFam3.chr9 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e panTro4.chr17 335670 24586 + 82630442 T a score=-1294.000000 s hg38.chr17_GL383563v3_alt 351148 1 + 375691 -a s ponAbe2.chr17 209286 1 + 73212453 -a i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 316080 1 - 81552678 -a i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1040198 1 - 1291538 -A i calJac3.chrUn_GL286409 C 0 I 303 s canFam3.chr9 15793233 1 - 61074082 c- i canFam3.chr9 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e chlSab2.chr16 218108 322 + 75148670 I e papAnu2.chr16 228694 0 + 74645514 C e rheMac3.chr16 242939 0 + 80904711 C e macFas5.chr16 250665 0 + 80997621 C e panTro4.chr17 335670 24586 + 82630442 T a score=-1350.000000 s hg38.chr17_GL383563v3_alt 351149 4 + 375691 aGAC s ponAbe2.chr17 209287 4 + 73212453 aGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 316081 4 - 81552678 agac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 242939 3 + 80904711 -aTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 250665 3 + 80997621 -aTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 228694 3 + 74645514 -atc i papAnu2.chr16 C 0 C 0 s canFam3.chr9 15793234 2 - 61074082 -at- i canFam3.chr9 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e calJac3.chrUn_GL286409 1040199 303 - 1291538 I e chlSab2.chr16 218108 322 + 75148670 I e panTro4.chr17 335670 24586 + 82630442 T a score=4450.000000 s hg38.chr17_GL383563v3_alt 351153 10 + 375691 --TTTTTTTT--TA s ponAbe2.chr17 209291 10 + 73212453 --TTTTTTTT--TT i ponAbe2.chr17 C 0 I 1 s nomLeu3.chr19 316085 8 - 81552678 --tttttttt---- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 242942 9 + 80904711 --TTTTTTTT--A- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 250668 9 + 80997621 --TTTTTTTT--T- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 228697 11 + 74645514 --ttttttttaaa- i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1040502 8 - 1291538 --TTTTTTTT---- i calJac3.chrUn_GL286409 I 303 C 0 s canFam3.chr9 15793236 10 - 61074082 tattatcttg---- i canFam3.chr9 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e chlSab2.chr16 218108 322 + 75148670 I e panTro4.chr17 335670 24586 + 82630442 T a score=985810.000000 s hg38.chr17_GL383563v3_alt 351163 444 + 375691 AAGAACTCTTATGTGAAAGTCAAGCAACATCC-AGGCGGACAGTCCAGTTCTGCACAGACTTTA-GGGGATGGCTGGTGAGCCTGGCAGAGCGTGAGCAAGGAGCCGGCACCACAGACCCGGGAGGCCATGGGCTGTATTACCCTATAGAC--AACAGGAAACCC----TGGAGGTG----------CCCAGAGGAGGAGGGCACAAGAGGGAACGTAAACCAATGAAACTCTTGCCCCATGGAAAAGGGAAGGTGTA-----------------------------------------GGCTCCAGAGGG-----------------ACAACAAaggcagatttcagctcaaaagagggaagaatttccacct-tctgagctgcccctgaatgcaaagcattatgcagtgaagctctctgtcTCAGTCCACCTAGGACTCAGGGACCAATGGAGCAAAGAA-TCTCCACTCAGGAAGGGGTTTAGACTAG----ACATCACttttttttttttt-----tttttttgaga s ponAbe2.chr17 209302 449 + 73212453 AAGAACTGTTATGTCAAAGTCAAGCCACATCC-AGGCGGACAGTCCAGTTCTGCGCAGACTTTA-GGGGACGGCTGGCGAGCCTGGCAGAGCGTGAGCAAGGAGCCGGCACCGCAGACCCAGGAGGGCATGGGCTGTATTACCCTATAGAA--GACAGGAAACCC----TGGAGGTG----------ACCAGAGGAGGAGGGCACGAGAGGGAATGTAAACCAGTGAAACTCTTGCCCCATGGAAAAGGGAAGGTGTA-----------------------------------------GGCTCCAGAGGC-----------------ACAACAgaggcagatttcagctcaaaagagggaagaatttccacct-cctgagctgcccctgaatgcaaagcattatgcagtgaagctctctgtcTCAGTCCACCCAGGACTCAGGGACTGATGGAGCGAAGAA-TCTCCACTCAGCAAGGGGTTTAGACTAG----ACATTACTTtttgtttgtttgtttgtttttttgaga i ponAbe2.chr17 I 1 C 0 s nomLeu3.chr19 316093 447 - 81552678 aagaaCTGTTATATCTAAGTCAAGCAATATCC-AGGCGGACAGTCCAGTTCTGCGCAGACTTTAGGGGGATGGCTGGCGAGCCTGGTGGAGCGTGAGCAAGGAGCCGGCACCGCAGACCTGGTAGGGTATGGGCCGTATTACCCTATGGAC--GACAGGAAACCC----TGGAGGTG----------CCCAGAGGAGGAGGGAACGAGAGGGAACGTAAACCAGTGAAACTCTTGCCCCATGGAAAAAGGAAGGTGTA-----------------------------------------GGCTCCAGAGGG-----------------ACAACAgaggcagatttcagctcaaatgagggaagaatttccacct-catgagctgcccctaaatgcaaAGTATTATGCAGTGAAGGTGTCTGTCTCAGTCCACCTAGGACTCACGGACCGATGGAGCGAAGAATTCTCCACTCAGGAAGGCGTTTAGACTAG----ACATTACttttttttttttt----ttttttttgaga i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 242951 440 + 80904711 AAGAACTTTTATGTCAAGGTCAAGCAACATCC-AAGCGGCCAGTCCAGTTCTGCGCAGACTTTAGGGGGATGGCTGGTGAGCCTGGCAGGGCGTGAGCAAGAAGCCGGCACCGCAGACCCAGGAGGGCATGGGCTGTATTACCCTATAGAT--AGCAGAAAACCC----TGGAGGTG----------CCCAGAGGAGGAGGGCACGAGAGGGAACGCAAACCAGTGAAACTCTtgccccgtggaaaatggaaggtgtatt---------------------------------tgagatggctccagaggg-----------------acaacagaggcagatttcagctcaaaagagggaagaatttccacct-cctgagctgtccctaaatgcaaAGCGTTATGCAGTGAAG----CTGTCTCAATCCTCCTAGGACTCAGGTACCGACGGAACGAAGAATTCTCCACTCAGGAAGGGCttt--------------ttgttgttgtttcgttt-----tgtttttgaga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 250677 440 + 80997621 AAGAACTTTTATGTCAAGGTCAAGCAACATCC-AAGCGGCCAGTCCAGTTCTGCGCAGACTTTAGGGGGATGGCTGGTGAGCCTGGCAGGGCGTGAGCAAGGAGCCGGCACCGCAGACCCAGGAGGGCATGGGCTGTATTACCCTATAGAT--GGCAGAAAACCC----TGGAGGTG----------CCCAGAGGAGGAGGGCACGAGAGGGAATACAAACCAGTGAAACTCTTGCCCCGTGGAAAATGGAAGGTGTATT---------------------------------TGAGATGGCTCCAGAGGG-----------------ACAACAgaggcagatttcagctcaaaagagggaagaatttccacct-cctgagctgtccctaaatgcaaAGCGTTATGCAGTGAAG----CTGTCTCAGTCCTCCTAGGACTCAGGTACCGATGGAACGAAGAATTCTCCACTCAGGAAGGGCttt--------------ttgttgttgtttcgttt-----tgtttttgaga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 228708 437 + 74645514 aagaacttttacGTCAAGGTCAAGCAACATCC-AAGCGGACAGTCCAGTTCTGCACAGACTTTAGGGGGATGGCTGGTGAGCCTGGCAGGGCGTGAGCAAGGAGCCGGCACCACAGACCCAGGAGGGCATGGGCTGTATTACCCTATAGAT--GGCAGGAAACCC----TGGAGGTG----------CCCAGAGGAGGAGGGCATGAGAGGGAACGCAAACCAGTGAAACTCTTGCCCCGTGGAAAATGGAAGGTGTATT---------------------------------TGAAATGGCTCCAGAGGG-----------------ACAACAGAGGCAGATTTCAGCTCAAAAGAGGGAAGAATTTCCACCT-CCTGAGCTGTCCCTAAATGCAAAGCGTTATGCAGTGAAG----CTGTCTCAGTCCTCCTAGGACTCAGGTACCGATGGAACGAAGAATTCTCCACTCAggaagggtttt-----------------ttgttgttttgttt-----tgtttttgaga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 218430 440 + 75148670 AAGAACTTTTATATCAAGGTCAAGCAACATCC-AAGCGGACAGTCCAGTTCTGTGCAGACTTTAGGGGGATGGCTGGTGAGCCTGGCAGGGCGTGAGCAAGGAGCCGGCACCACAGACCCAGGAGGGCATTGGCTGTATTACCCTATAGAT--GGCAGGAAACCC----TGGAGGTG----------CCCAGAGGAGGAGGGCACGAGAGGGAATGTAAACCAGTGAAACTCTTGCCCCGTGGAAAATGGAAGGTGTATT---------------------------------TGAGATGGCTCCAGAGGG-----------------ACAACAgaggcagatttcagctcaaaagagggaagaatttccacct-cctgagctgtccctaaatgcaaAGCATTATGCAGTGAAT----CTGTCTCAGTCCCCCGAGGACTCAGGTACCGATGGAACGAAGAATTCTCCACTCAGGAAGGGCttt--------------ttgttgttattttgttt-----tgtttttgaga i chlSab2.chr16 I 322 C 0 s calJac3.chrUn_GL286409 1040510 478 - 1291538 AAGAACTGTTATGTCAAGGTCAAGCAACATCC-AGGCGGA-----CAGTTCTACAGAGATTTTGGGGGGATGGCTGGTGAGCCTGGCAGAGCGTAAGCAGGAGCCCGGCACTGCAGGCCTGGGAGCACACGGGCCGTATTACCCTAGAGAT--GGCAGGAAGCCC----TGGAGGTG----------CCCGGAGgagga-ggcatgagagggaacttaaacca-tgaaactctg--cctttggaaaagggaaggtgaatcactgaatcacagtttctttagggcagatcctgatgagatgtctccaaatgg-----------------acaacagaggcagatttcagctcaaaagagggaagaattttcacct-cctgggctgcccctaaatgcaaagcatcatgcagtgacgctctctgtcTCCATCCACCTAGGACTCAGGGACCGATGTGGGGAAGAATTCTCCCCTCAGGAAGGGGTTGAGACTAG----ACATTAAttttttttaattt-----tttttttcaga i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15793246 474 - 61074082 aaTAAATATTATGTTGTGGTCAAGCAACAACAGGGGTAGAGGATCCTATTCTGCA-AAACTTTAGGAGGATGGCTTATGAGCCAG-------GTGCCCAGGA------CAGTTTGGGATCTGGGATGTGTGATCCATATAACCCTACAGATTCTACAAGGAATCCATTTAAGAGATGAGTATTTCTCTCCAGAGgaggtaggtatgataggtatcttgcaccagtgaaaatcctagtccatggaaaagggaaggcttatt---------------------------------tgagaaggtcccaaagggacagactcagaggtagaacaacagagtcaggtctcagctcaagtaaaggaagaatttctaCCTACATAAGAAGCCCTCAAATGCAAAGCACTATATGATGAGC----ATGTCACAGTCCA-TTGGTGCTCAGAGACACACTAAGGAAAGTTTTCTTGTATCACGAAGGGGATTAGACTAGTATTAACCTTTAATTATATACTTT-----TCCTTTTACGA i canFam3.chr9 C 0 I 1148 e mm10.chr11 75956531 5033 + 122082543 I e panTro4.chr17 335670 24586 + 82630442 T a score=484962.000000 s hg38.chr17_GL383563v3_alt 351607 231 + 375691 cagagtcttgccctgtcgcccagcctgga--gtgcagtggctcaatctcagctcatggcaacctccacctcccgggttcaagtgattctcctgcctcagcctcccaagtagctaggattacaagc----gtgtgttgccacacctggctaatttttacatgtttagtagagatggggtttcaccatgttgcccaggctggtcttgaactcctaacctcaggtgatctgcccaccttg s ponAbe2.chr17 209751 231 + 73212453 cagagtcttgctctgtcgcccaggctgga--gtacaatggcacaatctcagctcatggcaacctccacctcccgggttcaagtgattctcctgcctcagcctcccaagtagctaggattacaagc----gtgtgctgccacacctggctaatttttacatgtttagtagagacagggtttcaccatgttgcccaggctggtcttgaactcctgacttcaggtgatctgcccaccttg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 316540 233 - 81552678 cacagtcttgccctgtcacccaggctggagtgtgcagtggcataatctcagctcatggcaacctccacctcccgggttcaagtgattctcctgcctcagcctcccaagtagctaggattacaggc----atgtgctgccacacctggctaatttttacatgtttaatagagacggggtttcaccatgttgcccaggctggtcttgaactcctgacttcaggtgatctgcccaccttg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 243391 223 + 80904711 cagagtcttgctctgtggccca-gctgga--gtgcagtggcgtgatctcagctcatggca------tcctcccaggttcaagtgattttcctgcctcagtctcccaagtagctaggattacaggt----gtgcactgccacacctggctaatttttatctctttagtagagatggggtttcaccaagttacccaggctggtcttgaactcctgacctcgggtgatctgcccacc-tG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 251117 223 + 80997621 cagagtcttgctctgtggccca-gctgga--gtgccgtggcgtgatctcagctcatggca------acctcccaggttcaagtgattttcctacctcagtctcccaagtagctaggattacaggt----gtgcactgccacacctggctaatttttatctctttagtagagatggggtttcaccatgttacccaggctggtcttgaactcctgacctcgggtgatctgcccacc-tG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 229145 224 + 74645514 cagagtcttgctctgtgttccaggctgga--gtgcagtggcgtgatctcagctcgtggca------acctcccgggttcaagtgattttcctgccacagcctcccaagtagctaggattacaggt----gtgcactgccacacctggctaatttttatctctttagtagagatggggtttcaccatgttacccaggctggtcttgaactcctgacctcgggtgatctgcccacc-tg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 218870 224 + 75148670 cagagtcttgctctgtggtccaggctgga--gtgcagtggcgtgatctcagctcatggca------acctcccgggttcaagtgatttttctgcctcagtctcccaagtagctaggattacaggc----atgcgctgccacacctggttaatttttatctctttagtagagatgggatttcaccatgttacccaggctggtcttgaactcctgacctcgggtgatctgcccacc-tG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1040988 235 - 1291538 cagagtctagctctgtcacctaggctgga--gtgcagtggtgtaatcctggctcactgcaacctccacctccaggattcaaatgattctcctgcctcagcctccctattagctaggactacaggcatatatgtgctgccacccccggctaatttttacatttttagtagagacagggtttcactatgttgcccaggctggtctccaattcctgatctcaggtgatccgcccaccttg i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I e canFam3.chr9 15793720 1148 - 61074082 I e panTro4.chr17 335670 24586 + 82630442 T a score=115842.000000 s hg38.chr17_GL383563v3_alt 351838 43 + 375691 TCAttcatgttcttatataaagttcta----attccttttcaacgtt s ponAbe2.chr17 209982 43 + 73212453 tcattcatgttcttatataaagttcta----attccttttcaatgtt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 316773 43 - 81552678 TCAttcatgttcttatataaagttcta----attccttttcaacatt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 243614 43 + 80904711 TCAttcatgttcttacataaagaccta----attgcttttcaatgtt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 251340 43 + 80997621 TCAttcatgttcttacataaagaccta----attccttttcaatgtt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 229369 43 + 74645514 tcATTCATGTTCTTATATAAAGACCTA----ATTCCTTTTCAATGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 219094 43 + 75148670 TCAttcatgttcttatataaagaccta----attccttttcaatgtt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1041223 43 - 1291538 acattcatgttcttatataaagatcta----attctttttcaaagtt i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15794868 47 - 61074082 TCAtctatgttgttatataaagatctaactgattctttttcaaaact i canFam3.chr9 I 1148 C 0 e mm10.chr11 75956531 5033 + 122082543 I e panTro4.chr17 335670 24586 + 82630442 T a score=680354.000000 s hg38.chr17_GL383563v3_alt 351881 225 + 375691 gcgcagtagcccaaggtatgaaaatacaa-gtctacggagctgtctcaccacgaacaaacattcagactgtg----------tacgatctttcaccaccacagaccgtcacaaaggctgtcccagaagttgtcacctgt-gcacaggtgccagcatttctttagggtagatcctgagaagtag-----------------------------------------------------aatcactgaatcactatgtcacagggcagctgca---tttattttaacagttctcac s panTro4.chr17 311084 220 + 82630442 gcgcagtagcccaaggtatgaaa-tacaaagtatatggagctgtgtcaccacgaacaaaca----gacagtg----------tataatttttttctaccacagaccgtcacaaaggctgtcccagaagttgtcacctgt-gcacaggtgccagcgtttcttttgggtagatcttgagaagtag-----------------------------------------------------aatcactgaatcactatgtcacagggcagctgca---tttatttta-caggtctcac i panTro4.chr17 T 24586 C 0 s ponAbe2.chr17 210025 218 + 73212453 gcgcagtagcccaaggtatgaaaatacaa-gtttacggagctatctcagcacgaacaaacattcagactgtg-----------------tttcaccaccataaaccgtcacaaaggctgtcccagaagttgtcacctgt-gcacaggtgccagcatttctttagggcagatcctgagaagtag-----------------------------------------------------aatcactgaatcactatgtcacagggcagctgca---tttattttaacaggtcttac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 316816 235 - 81552678 gcacagtagcccaagatatgaaaatataa-gtttacggagctatctcaccacgaacaaacattcagactatgaattcattaagacaatctttcaccaccacaaaccatcacaaaggctgtcccagaagttgtcccctgt-gcacaggtgccagcgtttctttagggcagatcctgagaagtag-----------------------------------------------------aatcactgaatcactatgtcacagggcagctgca---tttattttaacaggtcttac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 243657 225 + 80904711 gcgcagcagcccaaggtatgaaaatacaa-gtttacggagttttctcaccacgaacaaatattcagactctg----------tacgatctttcgtcaccacaaactgtcacaaaggctgtcccagaagttgtcacctgt-gcacaggtgccagcgtttctttagggcagatcctgagaagtag-----------------------------------------------------aatcactgaatcaccatgtcacagggcagttgca---tttattttgacaggtcctgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 251383 225 + 80997621 gcgcagcagcccaaggtatgaaaatacaa-gtttacggagttttctcaccacgaacaaatattcagactctg----------tacgatctttcgtcaccacaaactgtcacaaaggctgtcccagaaattgtcacctgt-gcacaggtgccagcgtttctttagggcagatcctgagaagtag-----------------------------------------------------aatcactgaatcaccatgtcacagggcagttgca---tttattttgacaggtcctgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 229412 225 + 74645514 GCGCAGTAGCCCAAGGTATGAAAATACAA-GTTTACGGAGTTTTCTCACCACGAACATACATTCAGACTCTG----------TACGATCTTTCGTCACCACAAACTGTCACAAAGGCTGTCCCAGAAGTTGTCACCTGT-GCACAGGTGCCAGCGTTTCTTTAGGGCAGATCCTGAGAAGTAG-----------------------------------------------------AATCACTGAATCACCATGTCACAGGGCAGTTGCA---TTTATTTTGACAGGTCCTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 219137 225 + 75148670 gcgcagtagcccaaggtatgaaaatacaa-gtttacggagttttctcaccacgaacaaacattcagactctg----------tacaatctttcgtcaccacaaactgtcacaaaggctgtcccagaagttgtcacctgt-gcacaggtgccagtgtttctttagggcagatcctgagaagcag-----------------------------------------------------aatcactgaatcaccatgtcacagggcagttgcg---tttattttgacaggtcctgc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1041266 279 - 1291538 gcacagcagtccaaggtatgaaaatacaa-gcttatgtagttttctcaccaccaacaaacattcagactgta----------tacgatttttcaccatcacaaactgtcataaaggctgtcccagaagttgtcacctgtggcacaggtgccagcgtttctttagggcaggtcctaagaagtggcatcactgaatcACTATCTCACAGTTTCTTTAGAGCCAGGTCCTGAGAAGCGCAATCACTGAATCACCATTTCACAGGGCAGCTGCG---TTTATCAGAACAGGTCCTAC i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15794915 208 - 61074082 gcacagaactcctgggtatgaccatctga-gttcctctagctacttcaccaacagtgaatggtcaggc--tg----------ctcagtttctcacgaccgcaaactgccacaaagactatcccaaaactttctacctgt-gcacacatgccagggtttccttagggcagatcctgagaaacag-----------------------------------------------------cacccct--------atgtcgtagggcagatacattttttattttaa---------- i canFam3.chr9 C 0 C 0 e mm10.chr11 75956531 5033 + 122082543 I a score=1374563.000000 s hg38.chr17_GL383563v3_alt 352106 443 + 375691 caaactgcATCCACCATGATGTTCCTTTCCAAGCCTCGGATCCCAGAGATTTACAGACCCCATCTCTATGATATGTCTCCTTGTCGGCTTCAGCCAGGCATTCATACCTCCCTGGGATACTCCAGGCCTCAGTGCAGCTCTGTGGCTCCTCCTTACTATGAAAACCATCACCCACCCC-GAGACAGGCTG------CCGACATCATCGGCAGCCTTGGAGCACAGCCCAAATGGT-CGCCCATCCGGCTACTGGTGGAGAAGACTCTTGGATGAGGAAGGCAGGCCTCCTAACTCTGAGATGCTGCACCTCT----GTCAGTCAGGGGGTACTCCATCACTCCATCCATGAGTGAGAAGG-----AGGGGCTGGGCAAGAGGAGACT----AAATCCTGGCGTC-ACTCAACGGCTTGGATGGGCCAGAACCAAAGATGAAAATGCACCAACATGTAAATTTAGC s panTro4.chr17 311304 436 + 82630442 caaactgcattcACCATGATGTTCCTTTCCAAGCCTCGGATCCCAGAGATTTACAGACCCCATCTCTATGATATGTCTCCTTGTCGGCTTCAGCCAGGCATTCATACCTCCCTGGGATACTCCAGGCCTCAGTGTAGCTCTGTGGCTCCTCCTTACTATGAAAACCATCACCCACCCCTGAGACAGGCTG------CCAACATCATCGGCAGCCTTGGAGCGCAGCCCAAATGGT-CGCCCATCTGGCTACTGGTGGAGAAGACTCTTGGATGAGG--------CCTCCTAACTCTGAGATGCTGCACCTTT----GTGAGTCAGGGGGTACTCCATCACTCCATCCATGAGTGAGAAGG-----AGGGGCTGAGCAAGAGGAGACT----AAATCCTGGCGTC-ACTCAACGGCTTGGATGGGCCAGAACCAAAGATGAAAATGCACCAACATGTAAATTTAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 210243 436 + 73212453 caaactgCATCCACCATGATGTTCCTTTCCAAGCCTCGGATCCCAGAGATTTACAGACCCCATCTCTATGATATATCTCCTTGTCAGTTTCATCCAGGCATTGATACCTCCCTGGGATACTCCAGGCCTCAGTGTAGCTCTGTGGCTCCTCCTTACTATGAAAACCATCACCCACCCCTGAGACAGGCTG------CCAACATCATCCGCAGCCTTGGAGCATAGCCCAAATGGT-CGCCCATCCGGCTACTGGTGGAGAAGACTCTCGGATGAGGAAGGCAGGCCTCCTAACTCTCAGATGCTGCACCTCT----GTGAGTCAGGGGGT--------ACCCCACCCATGAGTGAGAAGG-----AGGGGCTGCGCAAGAGGAGACT----AAATCCTGGCATC-ACTCAACGGCCTGGATGGGCCAGAACCAAAGATGAAAATGCACCAACATGTAAATTTAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 317051 435 - 81552678 caaactgcctccaCCATGATGTTCCTTTCCAAGCCTCGGATCCCAGAGATTTACAGACCCCATTTCTATGACATGTCTCCTTGTTGGTTTCAGCCAGGCATTGATACCTCCCTGGGATACTCCAGGCCTCAGTGTAGCTCTGTGGCTCCTCCTTACTATGAAAACCATCACCCACCCC-GAGACAGGCTG------CCACCATCATCGGCAGCCTTAGAGCACAGCCCAAATGGT-CGCCCATCCAGCTACTGGTGGAGAAGGCTCTTGGATGAGGAAGGCAGGCCTCCTAACTCTGAGATGCTGCACCTCT----GTGAGTCAGGGGGT--------ACTCCATCCGTGAGTGAGAAGG-----AGGGGCTGAGCAAGAGGAGACT----AAATCCTGGCGTC-ACTCAACGGCTTGGATGGGCCAGAACCAAAGATGAAAATGCACCAACATGTAAATTTAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 243882 433 + 80904711 aaaaccgcATCCACCATGATGTTCCTTTCTAAGCCTCGGATCCCAGAGATTTACAGATCCCGTCTCCACGACCTGTCTCCTTGTCAGTTTCAGCCAGGCACTGATACCTCCCTGGGATACTCCAGGCCTCAGCGCAGCTCTGTGGCTCCTCTTT-CTATGAAAACCATCACCCACCCCTGAGACGGGCTG------CCACCATCACCGGCAGCCTTGGAGCACAGCCCAAACGGT-CGCCCGTCTGGTTACTGGTGGAGAAGACTCTTGGCTGAGGAAGGCAGGCCTCCGAACTCTGAGGTGCTGCACC--T----GTGAGTCAGGGGCT--------ACGCAATCCGTGAGCGAGAAGG-----AGGGGCTGAGCAAGAGGAGACT----AAACCCCGGTGTC-ACTCAACAGCTGGGATGGGCCAGACCCAAAGATGAAAGTGCACCAACGTGTAAATTTCGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 251608 433 + 80997621 aaaaccgcATCCACCATGATGTTCTTTTCTAAGCCTCGGATCCCAGAGATTTACAGATCCCGTCTCCACGACCTGTCTCCTTGTCAGTTTCAGCCAGGCACTGATACCTCCCTGGGATACTCCAGGCCTCAGCGCAGCTCTGTGGCTCCTCTTT-CTATGAAAACCATCACCCACCCCTGAGACGGGCTG------CCACCATCACCGGCAGCCTTGGAGCACAGCCCCAACGGT-CGCCCGTCTGGTTACTGGTGGAGAAGACTCTTGGCTGAGGAAGGCAGGCCTCCGAACTCTGAGGTACTGCACC--T----GTGAGTCAGGGGCT--------ACGCCATCCGTGAGCGAGAAGG-----AGGGGCTGAGCAAGAGGAGACT----AAACCCCGGTGTC-ACTCAACAGCTGGGATGGGCCAGACCCAAAGATGAAAGTGCACCAACGTGTAAATTTCGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 229637 433 + 74645514 AAAACCGCATCCACCATGATGTTCCTTTCTAAGCCTCGGATCCCAGAGATTTACAGATCCCATCTCCATGACCTGTCTCCTTGTCGGTTTCAGCCAGGCACTGATACCTCCCTGGGATACTCCAGGCCTCAGCGCAGCTCTGTGGCTCCTCTTT-CTATGAAAACCGTCACCCACCCCTGAGACGGGCTG------CCACCATCACCGGCAGCCTTGGAGCACAGCCCAAATGGT-CGCCCGTCCGGTTACTGGTGGAGAAGACTCTTGGCTGAGGAAGGCAGGCCTCCTAACTCTGAGGTGCTGCACC--T----GCGAGTCAGGGGTT--------ACGCCATCCGTGAGCGAGAAGG-----AGGGGCTGAGCAAGAGGAGACT----AAACCCCGGTGTC-ACTCAACAGCTGGGATGGGCCAGACCCAAGGATGAAAATGCACCAACGTGTAAATTTCGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 219362 430 + 75148670 aaaaccgcATCCACCATGATGTTCCTTTCTAAGCCTCGGATCCCAGAGATTTACAGATCCCATCTCCATGACCTGTCTCCTTGTCGGTTTCAGCCAGGCACTGATACCTCCCTGGGATACTGCAGGCCTCAGCGCAGCTCTGTGGCTCCTCTTT-CTATGAAAACCGTCACCCACCCCTGAGACGGGCTG------CCACCATCACCGGCAG--GTGGGGCACAGCCCAAACGGT-CGCCTATCCGGTTACTGGTGGAGAAGACTCTTGGCTGAGGAAGGCAGGCCTCCTAACCCTGAGGTGCTGCACC--T----GTGAGTCAGGGGGT--------ACGCCATCCATGAGCGAGAAGG-----AGGGGCTGAGCAAGAGGAGACT----AAA-CCCGGTGTC-ACTCAACAGCTGGGATGGGCCAGACCCAAAGATGAAAATGCACCAACATGTAAATTTCAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1041545 429 - 1291538 CAGACTGCACCTACCATCATGTTCCTTTCCAAGCCTGGGATCCCAGAGTTTTACAGGTCCCATCTCTATTACATGTCTCCTCGTCAGTTTCAG-------------CCTCCCT-GGATGCTCCAGGCCTCCACGTAGTTCCACAGTTCCTCCTTACTGTGAAAACCATCACCCAACCCTCAGACAGGCTGTGCTGCCCCTCATTGCCAGCGGCCTTGATGTACAGGCCAAATGGT-CACCCATCCAGCTACTGACGGCAGGGACTCTTGGATGAGGAAGACAGGCCTTCTAACTCTGAGATGCTGCCCCTCTGTGAGTGAGTCAGGGGAT--------ACACCACCCATAAGTGAGA--------AGGGGCTGAGCAAAAGAAGACT----AAACCCTGGTGTC-ACCCAACAGCTTGGATGGGCCAGACCCAAAGATGAAAATGCACCAGAATGCAAATTTAGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75961564 399 + 122082543 cacacTGCATCCACAGTGATCATCCTTTCTAAGCCTCAGAACCCATGGATGTACAGCCCAGGTCCCTGTGAAATTTCTCCTTG---GTTTCAGCCTG--------------------TACTGTACACCTT----CATTTTCATTGTTTATctttcccatt-aaatcgtagcccacaaatgagatgggctg------tc-ccatcactgtgaacactcaagc-caaatcgaatggt-c----atcttgtcaa-gaaggaggggactcctgaaggatgcagg-aggctCTTTAACTCTGAGATGCTGCATCTTG----GTGAAGCAGAGAAT--------CCATCGTCAGTGACTTGGGACC-----AGCAGAAGAGCA-----AGTCT-CACAAAGCCTAGCATCAACTCAACTGCTCAGATGGGCCACGCCCAAAGACAAAACCACACCAACAGGTGAAGGAGGC i mm10.chr11 I 5033 I 95 s canFam3.chr9 15795123 433 - 61074082 caaatTGATGTCCATGTGACATTCCtttctaagcctcagatcccgtggctttatcagtctgatccctgtgaaatatcctcttgttcattttggcccaacatgttggtctccctggcatattctgtgccctggctttgtccccTTGCTCTTCCTTCCTATTCAGATCCTAACCT---TTTCAGATGGGTTG------CC------CCTGGTCACTTCCAAGCACAGGCCAAATAGTGCCCCCTCCCAGCTACTCAGTGAGGGGACCTCTGGATGGGG-AGGAGGCCCTTCTAAATCCAAGATGCTGCATTTCT----GGGAATCAGAGGAC--------ATACAATAAGTGAATGAGAAGGGGGCTAGGGAGCAGGCAAGAGAGAACTTTATAAACCCTGGCATCGACTCAACCGCCTGGAT-GGCCAGATCCCAAGATGAAAAAGCAGCAACACGT---TGCAGG i canFam3.chr9 C 0 C 0 a score=133163.000000 s hg38.chr17_GL383563v3_alt 352549 47 + 375691 CATGAGCACAGCTGGGTGATGGAGACAGGACCGGAT------CGTCAGTATCC--- s panTro4.chr17 311740 47 + 82630442 CATGAGCACAGCTGGGTGATGGAGACAGGACCGGAT------CGTCAGTATCC--- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 210679 47 + 73212453 CATGAGCACAGCTGGGTGATAGAGACAGGACCGGAT------CGTCAGTATCC--- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 317486 47 - 81552678 CATGAGCACAGCTGGGTGACAGAGACAGGACTGGAT------CCTCAGTATCC--- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 244315 49 + 80904711 CATGAGCACAGCTGGGTGATAGAGACAGGACCGGCTAG----AGACAGTGTCC--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 252041 53 + 80997621 CATGAGCACAGCTGGGTGATAGAGACAGGACCGGCTAGAGACAGACAGTGTCC--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 230070 53 + 74645514 CATGAGCACAGCTGGGTGATAGAGACAGGACCGGATAGAGACAGACAGTGTCC--- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 219792 53 + 75148670 CATGAGCACAGCCGGGTGATAGAGACAGGACCGGATAGAGACAGACAGCGTCC--- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1041974 46 - 1291538 CATGAGCACAGCTGGGTGATGGAGATGGGACC-GAT------CATCAGTATCC--- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15795556 56 - 61074082 CATGAGCACAGCTGCATGAGTCAGGCAGGGCTGGGTACTGACGACCATCACCCTCC i canFam3.chr9 C 0 I 50 e mm10.chr11 75961963 95 + 122082543 I a score=1885115.000000 s hg38.chr17_GL383563v3_alt 352596 543 + 375691 AACACGCAACTGATTAAGTGTCCATGGTAAAATAAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGTGCTCTGGTATTTTCAGCAGCAGATAACTGCCATGTGAATGGAGAAGCCGCCCTCCCAATGAATGCTGCTTACTGTACAGGCTGGCACAGGCCTTGAAATGCCAGTGCTTTGCAGGCAGCCAGCTGCTGTCAGAGGGGTGAGGATGTCTGTGCCCGGGGCTGCAGCTCCGCTCGTGTTCTGCAATTTCT-ACAG----GCTGGCCGGACTCCCCACAGCCAGCTGG---GGGT-ACACACATCACCGTGCTTACA-CCCCCAA-GCATCCCAAAAGCAAGGAAAAGGGCCACTTCAGGGGCTCTCCCAA-CCCAAGCAGCCACCTTGTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCAGGGTGGAGGTAGACAGGAAGAAACCAGAGCCAGCCCGGGCTCAGCTG---CCTCGTTCCCAGAGCTGACCC--CTCCGGAGCCTAGGTGCTCACCCTCATGTCACCTCCCACCTGTCACG s panTro4.chr17 311787 544 + 82630442 AACACGCAACTGATTAAGTGTCCATGGTAAAATAAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGTGCTCTGGTATTTTCAGCAGCAGATAACTGCCATGTGAATGGAGAAGCCGCCCTCCCAGTGAATGCTGCTTACTGTACGGGCTGGCGCAGGCCTTGAAATGCCAGTGCTTTGCAGGCAGCCAGCTGCTGTCAGAGGGGTGAGGATGTCTGTGCCCGGGGCTGCAGCTCCGCTCGTGTTCTGCAGTTTCCAACAG----GCTGGCCGGACTCCCCATAGCCAGCTGG---GGGC-ACACACATCACCATGCTTACA-CCCCCAA-GCATCCCAAAAGCAAGGAAAAGGGCCACTTCAGGGGCTCGCCCAA-CCCAAGCAGCCACCTTGTAGNTAAGAGAGCTCTCCC-----CAGACCCAGCGGGGTGGAGTCAGACAGGAAGAAACCAGAGCCAGCCCGGGCTCAGCTG---CCTCGTTCCCAGAGCTGACCC--CTCGGGAGCCTGGGTGCTCACCCTCATGCCACCTCCCACCTGTCACA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 210726 545 + 73212453 AACACGCAACTGATTAAGTGTCCATGGTAAAATCAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGTGCTCTGGTATTTTTAGCAGCAGATAACCGCCATGTGAATGGAGGAGCCGCCCTGCCAGTGAATGCTGCTTACTGTACGGGCTGGCGCAGGCCTTGAAACGCCAGTGCTTTGCAGGCAGCCAGCTGCTGTCAGAGGGGTG-GGATGTCTGTGCCCGGGGCTGCAGCTCCGCCCGTGTTCTGCAGTTTCT-ACAGAACTGCTGGCCGGACTCCCCACAGCCAGCCGG---GGGT-ACACACATCCCCGTGCTTATA-CCCTCAA-GCATCCCAAAAGCAA-GAAAAGGGCCACTTCAGGGGCTAGCCCAA-CCCAAGCAGCCACCTTCTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCGGGGTGGAGGGAGACGGGAAGAAACCAGAGCCGGCCTGGGCTCAGCTC---CCTCGTTCCCAGAGCTGACCC--CTCGGGAGCCTGGGTGCTCACCCTCATGTCACCTCCCACCCGTCACA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 317533 542 - 81552678 AACACGCAACTGATTAAGTGTCCATGGTAAAATAAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGTGCTCTGGTATTTTTAGCAGCAGTTAACTGCCATGTGAATGGAGGAGCCGCCCTCCACATGAATGCTGCTTACTGTATGAGCTGGCGCAGGCCTTGAAATGCCAGTGCTTTGCAAGCAGCCAGCTGCTGTCAGAGGGGTGAGGATGTCTGTGCCCGGGGCTGCAGCTCCGCCCGTGTTCTGCAGTTTCT-ACAG----GCTGGCCGGACTCCCCACAGCCAGCTGG---GGGT-ACACACATCACCATGCTTATA-CCCCTAA-GCATCCCAAAAGCAA-GAAAAGGGCCACTTCAGGGGCTCACCCAA-CCCAAGCAGCCACCTTCTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCGGGGTGGGGGGAGACAGGAAGAAACCAGAGCCGGCCCGGGCTCAGCTC---CCTCGTTCCCAGAGCTGACCC--CTCGGGAGCCTGGGTGCTCACCCTCATGTCACCTCCCACCTGTCACA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 244364 539 + 80904711 AACA--CAACTGATTAAGTGTCCATGGTAAAAGAAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGAGCTCCGGTATTTTTAGCAGCACATAACTGCCATGTGAATGGAGGAGCTGCCCTCCCAACGAATGCTGCTTACTGTATGGGCTGGCGCAGGCCTTGAAATGCCAGTGCTTTGCAGGGAGCTAGCTGCTGTCAGAGGGGTGAGGATGTCTGTGCCCGGGGCGGCA-CTCTGCCCATGTTCTGCAGTTTCT-ACAG----GCTGGCCAGACTCCCCACAGCCAGCTTG---GGGT-ACACACATCACCATGCCTACA-CCCCCAA-GCATCCTAAAAGCAA-GAAAAGGGCCACTTCAGGGGCTTGCCCAA-CCCAAGCAGCCACCTTCTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCGGGGTGGAGGGAGACAGGAAGAAACCAGAGCCGGTCCGGGCTCAGCTC---CCTCGTTCCCAGAGCTCACCC--CTCGGGAGCCTGGGTGCTCACCCTCATGTCACCTCCCACCCGTCACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 252094 540 + 80997621 AACA--CAACTGATTAAGTGTCCATGGTAAAAGAAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGAGCTCCGGTATTTTTAGCAGCACATAACTGCCATGTGAATGGAGGAGCTGCCCTCCCAACGAATGCTGCTTACTGTATGGGCTGGCGCAGGCCTTGAAATGCCAGTGCTTTGCAGGGAGCTAGCTGCTGTCAGAGGGGTGAGGATGTCTGTGCCCGGGGCGGCAGCTCTGCCCATGTTCTGCAGTTTCT-ACAG----GCTGGCCGGACTCCCCACAGCCAGCTTG---GGGT-ACACACATCACCATGCCTACA-CCCCCAA-GCATCCTAAAAGCAA-GAAAAGGGCCACTTCAGGGGCTTGCCCAA-CCCAAGCAGCCACCTTCTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCGGGGTGGAGGGAGACAGGAAGAAACCAGAGCCGGTCCGGGCTCAGCTC---CCTCGTTCCCAGAGCTCACCC--CTCGGGAGCCTGGGTGCTCACCCTCATGTCACCTCCCACCCGTCACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 230123 540 + 74645514 AACA--CAACTGATTAAGTGTCCATGGTAAAAGAAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGAGCTCCGGTATTTTTAGCAGCACATAACTGCCATGTGAATGGAGGAGCTGCCCTCCCAACGAATGCTGCTTACTGTATGGGCTGGCGCAGGCCTTGAAATGCCAGTGCTTTGCAGGGAGCTAGCTGCTGTCAGAGGGGTGAGGATGTCTGTGCCCGGGGCGGCAGCTCTGCCCACGTTCTGCAGTTTCT-ACAG----GCTGGCCGGACTCCCCACAGGCAGCTTG---GGGt-acacacatcaccatgcctacA-CCCCCAA-GCATCCTAAAAGCAA-GAAAAGGGCCACTTCAGGGGCTTGCCCAA-CCCAAGCAGCCACCTTCTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCGGGGTGGAGGGAGACAGGAAGAAACCAGAGCCGCTCCGGGCTCAGCTC---CCTCGTTCCCAGAGCTCACCC--CTCGGGAGCCTGGGTGCTCACCCTCATGTCACCTCCCACCCGTCACA i papAnu2.chr16 C 0 I 310 s chlSab2.chr16 219845 540 + 75148670 AACA--CAACTGATTAAGTGTCCATGGTAAAAGAAGTGCTCTTACACGAGGTGCTAACGACGTAATTGCGGTCTTACATAAGGAGCTCGGGTATTTTTAGCAGCACATAACTGCCATGTGAATGCAGGAGCTGCCCTCCCAACGAATGCTGCTTACTGTACAGGCTGGTGCAGACCTTGAAATGCCAGTGCCTTGCAGGGAGCTAGCTGCTGTCAGAGGGGTGAGGATGTCTGTGCCCGGGGCTGCAGCTCCGCCCGTGTTCTGCAGTTTCT-ACAG----GCTGGCCGGACTCCCCACAGCCAGCTTG---GGGT-ACACACATCACCGCACCTACA-CCCCCAA-GCATCCTAAAAGCAA-GAAAAGGGCCGCTTCAGGGGCTCGCCCAA-GCCAAGCAGCCACCTTCTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCAGGGTGGAGGGAGACAGGAAGAAACCAGAGCCGGTCTGGGCTCAGCTC---CCTCGTTCCCAGAGCTGACCC--CTCGGGAGCCTGGGTGCTCACCCTCAGGTCACCTCCCACCTGTCACA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1042020 535 - 1291538 -ACATGCAGATGATTAGGTGCCCATGGTAAGATAAGTGCTTTCGAACGTGGCACTAATGATGTTATTTCGGTCTTAAATAAGGTGCTCGGGTATTTTTAGCAGCACGTAACTGACATGTGAATGGAGGCACTGCCCTCCC-GTGAACATTGCTGACTTTATGGGCTGGCACAGGCCTTGAAATGTCAGTGTTTTGCAGGCAGCTTGCTGCTATCAG-GTGGTGAGGATGTCTACG-CCAGGGCTGCAGCTCCACCCGTGTTCTGCAGGTCCT-GCAG----GCCGGCAGGACTCCCCACAGCCAGCTGG---GGTG-ACAC----CACTGCGCCTATACCCCCCCA-GCATCCCAACAGCAA-GAAAATGGCCACTCCAGGGGCTCGCCCAA-CCCAAGCAGCCACCTTCTAGCTAAGAGAGCTCTCCC-----CAGACCCAGCCGGGTGGAGGGAGGCAAGAAGAAACCAGAGCCGGCCCAGGCTCAGCTC---CCTAGTTCCCAGAGCCAACCC--CATGGGAACCAGCGTGGTCACCCTCATGTCACCTCCCACCTGTCACA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75962058 477 + 122082543 GACATGCGACTGAC----TGTCCAGGGTCTAGGGAGTACTTTTACGTAAGGTGTCCACATGGTACCTGCAGTCTTACATAAGACACTCAGGTATTTTTAGCAGCGTGGAAATGCAGTGTGAACAGAGGGGC-GCTCTTGAAGCACA-GCTG--GGCTCTGCAGCCTGCCACAGGCCTTGCAATGC---TCTTTTGCTGACAGCTCAC-----TCTGAGGACTGAGG----------TCTGGGCGG---------------------GCTCCT-A-------GC------AACCCCTAGCAACCAGCCAGTGTGGAT-ATATGTACCCTCACCCGTTTG-CCCCTGGCCCATCATGGGAGGAG-GATGGGGGTAG-----------TGTCCAT-GCCAAGTAGCCACCTGCTAGTTAAGTGATCTCCCCTATTGACAGAGCCAGTGCTGTGCAA------AGGGTACAAGCAGAGCTA----AGGCTCTCCCTGCACCCCATCCCCAAGCCAACTCC--TTCTAGAACATGGAAGTCCACTCTCATATCACCTCCCACGTATCACC i mm10.chr11 I 95 C 0 s canFam3.chr9 15795662 535 - 61074082 AACACCCCACTGATTAACTGCCCCTGGTATACTAAGTGTTTTTACATAAGGTGCTAAGTACGTA----CAGTCTTACATAAGATGCTCTGGTATTTTTAGCAGTATATAACTGCCATATGAA---AGGAGATGCTCTCCCAATGAATGCCACTTACTTTATAGGCTGGCGAAGTCCCTGGAATACTGATGTTTTACAGGCAGCTTGTTGCTGTCAGAGGATTGAGGATGTCTGTGCTGAGGGCAATAGCACCAGCCGTATTCTGCAGTTTCT-CCAG----GTCAGTCTGACACCCTACAACCAAAAGA---AAGTGATACATATCACTTCGATTG---CCCCCAA-GAATCACAGCAGCAA-GAAAAGGGCCACTTCGTTGACTTGGCAGATCCCCACCAGCCACATTCTAGCTTAGTAAGCCCTCCC-----CAAACCCAACAGAGTGGAGGGGGACAGGAGGAAGCCAGAGCAGAGCTA-GCCCTGCTT---CCACATCCCCAGAGCTGTCCCCACCCCAGAACCTGGGCAGCTACCATCCT-TTACCTCCCAATTATCACT i canFam3.chr9 I 50 C 0 a score=96215.000000 s hg38.chr17_GL383563v3_alt 353139 25 + 375691 AGAAACCCAAGGCTGCA-----GGTACAGT s panTro4.chr17 312331 25 + 82630442 AGAAACCCAGGGCTGCA-----GGTACAGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 211271 25 + 73212453 AGAAACCCAGGGCTACA-----GGCACAGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318075 25 - 81552678 AGAAACCCAGGGCTGCA-----GGTACAGT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 244903 25 + 80904711 AGAAACCCAGGGCTGCA-----GGTACAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 252634 25 + 80997621 AGAAACCCAGGGCTGCA-----GGTACAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 230973 25 + 74645514 agaaacccagggCTGCA-----GGTACAGT i papAnu2.chr16 I 310 C 0 s chlSab2.chr16 220385 25 + 75148670 AGAAACCCAGGGCTGGA-----GGTACAGT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1042555 30 - 1291538 AGAAACCCAGGGCTACAgaccgggtacagt i calJac3.chrUn_GL286409 C 0 I 320 s mm10.chr11 75962535 24 + 122082543 -AAAAGCCAAGGTTGAA-----GGTGAAGT i mm10.chr11 C 0 I 4 s canFam3.chr9 15796197 25 - 61074082 AGAAATCCAAAATTCCA-----AGGACAGT i canFam3.chr9 C 0 C 0 a score=365211.000000 s hg38.chr17_GL383563v3_alt 353164 130 + 375691 GAAGTCAAAG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACGTCCCGGGTTTAGGATCCCTGCAGCCTTTTTTCCTGTTTCGCTCCATTGTATT-AAGTCTA--ACACATACACAGAGGAGTACACACATGGA- s panTro4.chr17 312356 130 + 82630442 GAAGTCAAAG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACATCCCGGGTTTAGGATCCCTGCAGCCTTTTTTCCTGTTTCACTCCAttgtatt-aagtcta--acacatacacagaggagtacacacatgga- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 211296 130 + 73212453 GAAGTCAAAG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACGTCCCGGGTTTAGGATCCCTGCAGCCTTCTTTCCTGTTTCGCTCCAttgtatt-aagtcta--acacatacacagaggagcacacacatgga- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318100 130 - 81552678 GAAGTCAAAG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACGTCCCAGGTTTTGGATCCCTGCAGCCTTTTTTCCCGTTTCGCTCCAttgtatt-aagtcta--acacatacacagaggagtacacacatgga- i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 244928 125 + 80904711 GAAGTCAAAG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACGTGCCGGGTTTAGGATCCCTGCAGTCTTTATTCCCGTTTCTTTCCATTGTATT-AAGCCTAACACACACACACAGAGGAGTACAC-------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 252659 125 + 80997621 GAAGTCAAAG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACGTGCCGGGTTTAGGATCCCTACAGTCTTTATTCCCGTTTCTTTCCATTGTATT-AAGCCTAACACACACACACAGAGGAGTACAC-------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 230998 125 + 74645514 GAAGTCAACG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACGTCCCGGGTTTAGGATCCCTGCAGTCTTTATTCCCGTTTCTTTCCATTGTATT-AagcctaacacacacacacagaggagtaCAC-------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220410 125 + 75148670 GAAGTCAAAG---TGGCCTCTT------GGAATGGTGTGTCTGTATTCACGTCCCGGGTTTACGATCCCTGCAGTCTTTATTCCCGTTTCTTTCCATTGTACT-AAGCCTAACACACACACACAGAGGAGTACAC-------- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1042905 125 - 1291538 GAAGTCACAGGTATGGCTTCTCTGAGCAGGGAACGTGTGTCTGTATTCATGTGCTGGGTTT-----------AGCCTTTCTTCCCATTCCTCTCTATTGTATT-GACT-----ACACCCACACCGAGGAGCAcacacacgga- i calJac3.chrUn_GL286409 I 320 C 0 s mm10.chr11 75962563 125 + 122082543 GAGGTGAAAGGCTTGGCTCTTC------TGTATGAGTTGTGC---TTCACACCCTAGGGTTACACTCACTGTGGCCCCTTTT-CTGCTTTATTTTATTG-----AAGTATA--CTATAGACACGAAAGGACATACAAGTGAA- i mm10.chr11 I 4 I 257 s canFam3.chr9 15796222 122 - 61074082 GAAGTCAGA-------------------GGTGTGGCATATCTGTATTCATGTCTTGGGTCTAGGGTCACTGCTGCCTTTATTCTGGttttgctaaatcttcttgaagtatg--atacacatacagagaagtacacaaatcaaa i canFam3.chr9 C 0 C 0 a score=208917.000000 s hg38.chr17_GL383563v3_alt 353294 78 + 375691 ACGGGTAAGCGTTGGCATTGATGGAAAGAACGCAGCCCTCTGACTGACACCCCATTAAAGGAACCAGGCAG-TACCAGC s panTro4.chr17 312486 78 + 82630442 acgggtaagcgttagcattgatggaaggaacacagccctctgactgacaccccattaaaggaaccaggcag-taccagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 211426 78 + 73212453 acgggtaagcgttagccttgatggaaggaacacagccctctgactgacaccccattaaagaaaccaggcag-taccagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318230 78 - 81552678 acgggtaagcgttagcattgatggaaggaacacagccctctgactgacatcccattaaagaaaccaggcag-taccagc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 245053 78 + 80904711 CCGGGTTAGCGTTAGCACTGATGGAAGGAAGGCAGCCCTATGACTGACACCCCGATAAAGAAACCAGGCAG-TACCAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 252784 78 + 80997621 CCGGGTTAGCGTTAGCACTGATGGAAGGAAAGCAGCCCTATGACTGACACCCCGATAAAGAAACCAGGCAG-TACCAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 231123 78 + 74645514 CCGGGTTAGCGTTAGCACTGATGGAAGGAACGCAGCCCTATGACTGACACCCCGATAAAGAAACCAGGCAG-TACCAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220535 78 + 75148670 CCGGGTTAGCGTTAGCATTGATGGAAGGAACGCAGCCCTATGACTGACACCCTGATAAAGAAACCAGGCAG-TACCAGC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1043030 49 - 1291538 acaggttaatg-----------------------------tgacggatgcccagataaagaaaccaggcag-catcagc i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15796344 73 - 61074082 attgatgagttttggcaat------atgaacacacctatgtgaccaacacccagataaagaaaacaaaaaattaccagc i canFam3.chr9 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I a score=69081.000000 s hg38.chr17_GL383563v3_alt 353372 34 + 375691 CTCCCGGAAGCCCTTCTCATCCCTCCCGGAAGCC s panTro4.chr17 312564 23 + 82630442 ctcccggaagccctcCGCATCCC----------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 211504 34 + 73212453 ctcccggaagccGTCCACATCCCTCCCGGAAGCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318308 34 - 81552678 ctccgggaagccctcCACATCCCTCCCGGAAGCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 245131 33 + 80904711 CTCCAGGAAGCCCTCCTC-TGCCTCCCAGAAGCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 252862 33 + 80997621 CTCCAGGAAGCCCTCCTC-TGCCTCCCAGAAGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 231201 34 + 74645514 CTCCCGGATGccctcctcatccctcccggaagtc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220613 33 + 75148670 CTCCCGGAAGCCCTCCTC-TGCCTCCCAGAGGCC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15796417 34 - 61074082 ctcccagaagccttcctcatgcctccaggaatcc i canFam3.chr9 C 0 I 514 e mm10.chr11 75962688 257 + 122082543 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C a score=42669.000000 s hg38.chr17_GL383563v3_alt 353406 36 + 375691 CTCCTCATGCTTCCCGGAAGCCCTCCTCATCCCTCC s ponAbe2.chr17 211538 36 + 73212453 CTCCTCATCGCTCCCGGAAGCCCTCCTCATGCCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318342 35 - 81552678 GTCCACATCCCTCCCGGAAGCCGTCA-CATCCCTCC i nomLeu3.chr19 C 0 T 70 s rheMac3.chr16 245164 34 + 80904711 -TCCTCACCCCTCCCTGAAGTCCTCCTC-TGCTTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 252895 34 + 80997621 -TCCTCACCCCTCCCTGAAGCCCTCCTC-TGCCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 231235 35 + 74645514 -tcctcatgcctcccgggtgccctcctcatccctcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220646 34 + 75148670 -TCCTCATGCCTCCCGGAAGCCCTCCTC-TGCCTCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e panTro4.chr17 312587 0 + 82630442 C a score=7660.000000 s hg38.chr17_GL383563v3_alt 353442 6 + 375691 CGGAAG s ponAbe2.chr17 211574 6 + 73212453 CGGAAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245198 6 + 80904711 CGGAAG i rheMac3.chr16 C 0 I 7 s macFas5.chr16 252929 6 + 80997621 CGGAAG i macFas5.chr16 C 0 I 31 s papAnu2.chr16 231270 6 + 74645514 cggatg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220680 6 + 75148670 CGGAAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T e panTro4.chr17 312587 0 + 82630442 C a score=13153.000000 s hg38.chr17_GL383563v3_alt 353448 20 + 375691 CCCTCCTCATGCTTCCCGGA s panTro4.chr17 312587 7 + 82630442 -------------TCCCGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 211580 20 + 73212453 CCCTCCTCATCGCTCCGGGA i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 252966 19 + 80997621 CCCTCCTC-TGCCTCCCGGA i macFas5.chr16 I 31 C 0 s papAnu2.chr16 231276 20 + 74645514 ccctcctcatgcctcccgga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220686 19 + 75148670 -TCTCCTCATCCCTCCCGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e rheMac3.chr16 245204 7 + 80904711 I e nomLeu3.chr19 318377 70 - 81552678 T a score=119284.000000 s hg38.chr17_GL383563v3_alt 353468 91 + 375691 AGCCCTCCTCATCCCTCCCGGAAG--CCCTCCTCATCCCTCCCAGA---AGCCCTCCTCATCCCTCCCAGAAG---------CCCTCCTCATCCCTCCCGGAAGC s panTro4.chr17 312594 91 + 82630442 AGCCCTCCGCATCCCTCCCGGAAG--CCGTCCGCATCCCTCCCGGA---AGCCCCCCTCGTCCCTCCCGGAAG---------CCCCCCTCGTCCCTCCCGGAAGT i panTro4.chr17 C 0 I 133 s ponAbe2.chr17 211600 91 + 73212453 AGCCCTCCTCATCCCTCCCGGAAG--CCCTCCTCATGCCTCCCGGA---AGCCCTCCTCATGCCTCCCGGAAG---------CCCTCCTCATCCCTCCCGGAAGC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245211 98 + 80904711 AGCCCTCCTCATGCCTCCCGGAAG---TCTCCTCATGCCTCCCAGA---AGCCCTCCTC-TGCCTCCCGGAAGCTTCATCATCCCTCCTCATCCCTCCCAGAAGC i rheMac3.chr16 I 7 C 0 s macFas5.chr16 252985 89 + 80997621 -AGTCTCCTCATGCCTCCCGGAAG--CCCTCCTCATCCCTCCCGGA---AGCCCTCCTCATCCCTCCCGGAAG----------CCTCCTCATCCCTCCCAGAAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 231296 92 + 74645514 agccctcctc-tgcctcccggaagccctctcctcatgcctcccgga---agccctcctcatgcctcccggatg---------ccctcctcatccctcccggatgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220705 90 + 75148670 AGCCCTCCTC-TGCCTCCCAGAGG---CCTCCTCATGCCTCCCGGANNNNNNNNNNCTC-TGCCTCCCGGAAG----------TCTCCTCATCCCTCCCGGAAGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T a score=60825.000000 s hg38.chr17_GL383563v3_alt 353559 43 + 375691 CCCCCTCATGCTTCCCGGAAGCCCCCCTCATCCCTCCCGGAAG s panTro4.chr17 312818 43 + 82630442 CCCCCTCGTCCCTCCCGGAAGCCCCCCACGTCCCTCCCGGAAG i panTro4.chr17 I 133 T 176 s ponAbe2.chr17 211691 43 + 73212453 CCTCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAG i ponAbe2.chr17 C 0 I 44 s rheMac3.chr16 245309 41 + 80904711 CCTCCTC-TGCCTCCCGGAAG-TCTCCTCAAGCCTCCCGGAAG i rheMac3.chr16 C 0 I 10 s macFas5.chr16 253074 43 + 80997621 CCTCCTCATGCCTCCCGGATGCCCTCCTCATCCCTCCCGGAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 231388 43 + 74645514 cctcctcatccctcccggatgccctcctcatccctcccggaag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220795 41 + 75148670 CCTCCTC-TGCCTCCCAGAGG-CCTCCTCATGCCTCCCGGAAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T a score=211030.000000 s hg38.chr17_GL383563v3_alt 353602 157 + 375691 CCCTCCTCATC-------------------CCTCCCGGAAGCCCCCCTCATGCTTCCCGGAAGCCCCCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCGTCCTCATCCCTCCCGGAAGCCCCCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCC s panTro4.chr17 312685 157 + 82630442 CCCTCCGCATC-------------------CCTCCCGGAAGCCCCCCTCGTCCCTCCCGGAAGCCGCCCTCGTCCCTCCCGGAAGCCCTCCTCGTCCCTCCCGGAAGCCGTCCTCGTCCCTCCCGGAAGCCCCCCGTGTCCCTCCCGGAAGCCCCCCTCGTCCCTCCCGGAAGCCC i panTro4.chr17 T 176 I 135 s ponAbe2.chr17 211778 176 + 73212453 CCCTCCACATCCCTCCCGGAAGCCCTCCTGCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAACCCTCCTCATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCC i ponAbe2.chr17 I 44 I 3 s rheMac3.chr16 245360 151 + 80904711 CCCTCCTCATG-------------------CCTCCCGGATGCCCTCCTCATCCCTCCCGGAAG----TCTCATCCCTCCCGGAAG-TCTCCTCATGACTCCCGGAAGCCTTCCTCATCCCTCCCGGATGCCCTCCTCATCCCTCCCGGAAG-TCTCCTCATGCCTCCCAGAAGCCC i rheMac3.chr16 I 10 C 0 s macFas5.chr16 253117 151 + 80997621 -TCTCCTCATC-------------------CCTCCCGGAAG-TCTCCTCATGCCTCCCAGAAGCCCTCCTCATCCCTCCCAGAAG-TCTCCTCATCCCTCCCGGAAGCC-TCCTCATCCCTCCCGGAAGCCCTCCTC-TGCCTCCCGGAAG-TCTCCTCATGCCTCCCAGAAGCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 231431 153 + 74645514 ccctcctcatc-------------------cctcccggaagccctcctcatccctcccggaag----tctcatccctcccggaagccctcctcatccctcccggatgccctcctcatccctcccggatgccctcctcatgcctcccggaagccctcctcatccctcccggatgccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 220836 150 + 75148670 CCCTCCTC-TG-------------------CCTCCCAGAAGTCCTCCTCATGCCTCCCAGATGCCCTCCTC-TGCCTCCCGGATGCCCTCCTCATGCCTCCCGGATGCCCTCCTC-TGCCTCCCGGATGCCCTCCTC-TGCCTCCCAGAAGTCCTCCTCATGCCTCCCTGAAG--- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T a score=12484.000000 s hg38.chr17_GL383563v3_alt 353759 19 + 375691 ---TCATCCTTCCTGGAAGCC--C s panTro4.chr17 312977 19 + 82630442 ---tcatccctcccagaagcc--c i panTro4.chr17 I 135 C 0 s ponAbe2.chr17 211957 19 + 73212453 ---TCATCCCTCCCGGAAGCC--C i ponAbe2.chr17 I 3 C 0 s rheMac3.chr16 245511 20 + 80904711 TCCTC-TGCCTCCCGGAAGTC--- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253268 20 + 80997621 TCCTC-TGCCTCCCGGAAGTC--- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 231584 22 + 74645514 tcctcatccctcccggaagccc-- i papAnu2.chr16 C 0 I 2028 s chlSab2.chr16 220986 21 + 75148670 -TCTCATGCCTCCCGGATGCC-C- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T a score=10122.000000 s hg38.chr17_GL383563v3_alt 353778 5 + 375691 TCCTC s panTro4.chr17 312996 5 + 82630442 tcctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 211976 5 + 73212453 TCCTC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245531 5 + 80904711 TCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253288 5 + 80997621 TCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233634 5 + 74645514 tcctc i papAnu2.chr16 I 2028 C 0 s chlSab2.chr16 221007 5 + 75148670 TCCTC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T a score=1365.000000 s hg38.chr17_GL383563v3_alt 353783 1 + 375691 A s panTro4.chr17 313001 1 + 82630442 a i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 211981 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245536 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253293 1 + 80997621 A i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233639 1 + 74645514 a i papAnu2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e chlSab2.chr16 221012 0 + 75148670 C e nomLeu3.chr19 318377 70 - 81552678 T a score=19864.000000 s hg38.chr17_GL383563v3_alt 353784 11 + 375691 TGCTTCCCGGA s panTro4.chr17 313002 11 + 82630442 tgcttcccgga i panTro4.chr17 C 0 T 79 s ponAbe2.chr17 211982 11 + 73212453 TGCCTCCCGGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245537 11 + 80904711 TGCCTCCCGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253294 11 + 80997621 TGCCTCCCGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233640 11 + 74645514 tccctcccgga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221012 11 + 75148670 TGCCTCCCGGA i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T a score=7021.000000 s hg38.chr17_GL383563v3_alt 353795 9 + 375691 TGCCCTCCA s ponAbe2.chr17 211993 9 + 73212453 AGCCCTCCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245548 9 + 80904711 AGCCCTCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253305 9 + 80997621 AGCCCTCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233651 9 + 74645514 tgccctcct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221023 8 + 75148670 AG-CCTCCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T e panTro4.chr17 313013 79 + 82630442 T a score=2036.000000 s hg38.chr17_GL383563v3_alt 353804 4 + 375691 CATC s panTro4.chr17 312934 4 + 82630442 CGTC i panTro4.chr17 T 79 C 0 s ponAbe2.chr17 212002 4 + 73212453 CATC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245557 4 + 80904711 CATC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253314 3 + 80997621 C-TG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233660 4 + 74645514 catc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221031 4 + 75148670 CATG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318377 70 - 81552678 T a score=70902.000000 s hg38.chr17_GL383563v3_alt 353808 36 + 375691 CCTCCCGGAAGCCCTCCACATCCCTCCCGGAAGCCG s panTro4.chr17 312938 36 + 82630442 CCTCCCGGAAGCCCTCCTCATCCTTcctggaagccc i panTro4.chr17 C 0 T 132 s ponAbe2.chr17 212006 36 + 73212453 CCTCCCGGAAGCCCTCCACATCCCTCCCGGAAGCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318307 36 - 81552678 cctccgggaagccctcCACATCCCTCCCGGAAGCCG i nomLeu3.chr19 T 70 C 0 s rheMac3.chr16 245561 35 + 80904711 CCTCCCGGAAG-TCTCCTCATGCCTCCCGGAAGCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253317 35 + 80997621 CCTCCCGGAAG-TCTCCTCATGCCTCCCGGATGCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233664 36 + 74645514 cctcccggaagccctcctcatccctcccggaagccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221035 35 + 75148670 CCTCCCGGATGCCCTCCTC-TGCCTCCCGGAAGCCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C a score=11741.000000 s hg38.chr17_GL383563v3_alt 353844 21 + 375691 TCCTCATCCCTCCCGGAA---------------------------------------------------------------------------------------------------GCC s panTro4.chr17 312842 21 + 82630442 CCCACGTCCCTCCCGGAA---------------------------------------------------------------------------------------------------GCC i panTro4.chr17 T 132 C 0 s ponAbe2.chr17 212042 120 + 73212453 TCCTCATGCCTCCCGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318343 21 - 81552678 TCCACATCCCTCCCGGAA---------------------------------------------------------------------------------------------------GCC i nomLeu3.chr19 C 0 T 57 s rheMac3.chr16 245596 20 + 80904711 TCCTCATCCCTCCCGGAA---------------------------------------------------------------------------------------------------GT- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253352 20 + 80997621 TCCTCATCCCTCCCGGAA---------------------------------------------------------------------------------------------------GT- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233700 20 + 74645514 tcctcatccctcccggaa---------------------------------------------------------------------------------------------------gt- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221070 20 + 75148670 TCCTCGTGCCTCCCGGAT---------------------------------------------------------------------------------------------------GC- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C a score=3394.000000 s hg38.chr17_GL383563v3_alt 353865 6 + 375691 CCCCTC s panTro4.chr17 312863 6 + 82630442 CCCCTC i panTro4.chr17 C 0 T 112 s rheMac3.chr16 245616 6 + 80904711 CTCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253372 3 + 80997621 ---CTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233720 3 + 74645514 ---ctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221090 6 + 75148670 CCTCCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318364 57 - 81552678 T e ponAbe2.chr17 212162 0 + 73212453 C a score=16190.000000 s hg38.chr17_GL383563v3_alt 353871 14 + 375691 ATGCTTCCCGGAAG s ponAbe2.chr17 212162 14 + 73212453 ATCCCTCCCGGAAG i ponAbe2.chr17 C 0 I 44 s rheMac3.chr16 245622 14 + 80904711 ATGCCTCCCAGAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253375 14 + 80997621 ATGCCTCCCGGAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233723 14 + 74645514 atccctcccggaag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221096 14 + 75148670 CTGCCTCCCGGAAG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318364 57 - 81552678 T e panTro4.chr17 312869 112 + 82630442 T a score=0.000000 s hg38.chr17_GL383563v3_alt 353885 1 + 375691 C e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e chlSab2.chr16 221110 0 + 75148670 C e papAnu2.chr16 233737 0 + 74645514 C e rheMac3.chr16 245636 0 + 80904711 C e macFas5.chr16 253389 0 + 80997621 C e nomLeu3.chr19 318364 57 - 81552678 T e ponAbe2.chr17 212176 44 + 73212453 I e panTro4.chr17 312869 112 + 82630442 T a score=7600.000000 s hg38.chr17_GL383563v3_alt 353886 6 + 375691 CCCCCC s ponAbe2.chr17 212220 6 + 73212453 CCCTCC i ponAbe2.chr17 I 44 C 0 s rheMac3.chr16 245636 6 + 80904711 CCCTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253389 6 + 80997621 CCCTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233737 6 + 74645514 ccctcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221110 6 + 75148670 CTCTCC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318364 57 - 81552678 T e panTro4.chr17 312869 112 + 82630442 T a score=228522.000000 s hg38.chr17_GL383563v3_alt 353892 214 + 375691 TCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCCCCACATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCTCCCCCCACATCCCTCCCGGAAGCCCTCCTCATGCTTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGTC--CTCATCCCTCCCGGAAGCCCTCCTCATGCTTCCCGGATG s panTro4.chr17 312757 148 + 82630442 TCGTCCCTCCCGGAAGCCGTCCTCGTCCCTCCCGGAAGCCCCCCGTGTCCCTCCCGGAAGCCCCCCTCGTCCCTCCCGGAAG-------------------------CCCCCCACGTCCCTCCCGGAAGCCCCCCTCGTCCCTCCCGGAAGCCCCCCTCGTCCCTCCCGGAA-------------------------------------------G i panTro4.chr17 T 112 T 220 s ponAbe2.chr17 212226 192 + 73212453 TCATGCCTCCCGGAAGCCCTCCACATCCCTCCCGGAAGCCCTCCACATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAG---CCCTCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCTCCTCATCGCTCCGGGAA---------------------ACCCTCCTCATCCCTCCCGGAAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245642 184 + 80904711 TCATCCCTCCCGGAAG-TCTC-------------------------ATGCCTCCCAGAAGCCCTCCTCATCCCTGCCGGAAGCCC-CCTCATGCCTCCCAGAAG---CCCTCCTC-TGCCTCCCGGAAG-TCTCCTCATGCCTCCCGGAAGCCCTCCTCATCCCTCCCAGAAGTCTCCTCATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253395 208 + 80997621 TCATCCCTCCCGGAAG-TCTCCTCATGCCTCCCAGAAACCCTCCT-CTGCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGTCT-CCTCATGCCTCCCAGAAA---CCCTCCTC-TGCCTCCCGGAAG-TCTCCTCATGCCTCCCAGAAGCCCTCCTCATCCCTCCCGGAAGTCTCCTCATGCCTCCCAGAAGCCCTCCTCATCCCTCCCGGAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233743 212 + 74645514 tcatccctcccggatgccctcctcatccctcccggatgccctcctcatgcctcccggaagccctcctcatccctcccggatgccctcctcatccctcccggaag---ccctcctcatccctcccggaag-cctcctcatccctccaggaagccctcctcatccctcccggaagcctcctcatccctcccggatgccctcctcatccctccaggaag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221116 208 + 75148670 TCGTGCCTCCCGGATG-CCCTCCTCTGCCTCCCGGAAGCCTCCTC-ATGCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCTCCTCATGCCTCCCGGATG---CCCTCCTC-TGCCTCCCGGAAG-CCCTCCTCTGCCTCCCGGAAGCCCTTCTCATCCCTCCCAGAAGCCCTCCTCTGCCTCCCGGAAG-CCTCCTCATGCCTCCCGGATG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318364 57 - 81552678 T a score=14139.000000 s hg38.chr17_GL383563v3_alt 354106 11 + 375691 CCCTCCACATC s panTro4.chr17 312685 11 + 82630442 CCCTCCGCATC i panTro4.chr17 T 220 C 0 s ponAbe2.chr17 212418 11 + 73212453 CCCTCCACATC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245826 10 + 80904711 -TCTCCTCATC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253603 10 + 80997621 -TCTCCTCATG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233955 10 + 74645514 -cctcctcatc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221324 11 + 75148670 CCCTCCTCATG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318364 57 - 81552678 T a score=32757.000000 s hg38.chr17_GL383563v3_alt 354117 19 + 375691 CCTCCCGGAAGCCCTCCAC s panTro4.chr17 312696 19 + 82630442 CCTCCCGGAAGCCCCCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212429 19 + 73212453 CCTCCCGGAAGCCCTCCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318307 19 - 81552678 cctccgggaagccctcCAC i nomLeu3.chr19 T 57 C 0 s rheMac3.chr16 245836 18 + 80904711 CCTCCCAGAAGTC-TCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253613 13 + 80997621 CCTCCCGGAAGCC------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233965 19 + 74645514 cctccaggaagccctcctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221335 19 + 75148670 CCTCCCGGAAGCCCTCCTC i chlSab2.chr16 C 0 T 342 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C a score=755.000000 s hg38.chr17_GL383563v3_alt 354136 1 + 375691 A s panTro4.chr17 312715 1 + 82630442 G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212448 1 + 73212453 A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318326 1 - 81552678 A i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 245854 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 233984 1 + 74645514 a i papAnu2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e chlSab2.chr16 221354 342 + 75148670 T e macFas5.chr16 253626 0 + 80997621 C a score=55136.000000 s hg38.chr17_GL383563v3_alt 354137 39 + 375691 TCCCTCCCGGAAGCCGTCCTCATCCCTCCCGGAAGCCCT s panTro4.chr17 312716 39 + 82630442 TCCCTCCCGGAAGCCGCCCTCGTCCCTCCCGGAAGCCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212449 39 + 73212453 TCCCTCCCGGAAGCCCTCCACATCCCTCCCGGAAGCCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318327 39 - 81552678 TCCCTCCCGGAAGCCGTCCACATCCCTCCCGGAAGCCGT i nomLeu3.chr19 C 0 M 314 s rheMac3.chr16 245855 37 + 80904711 TGCCTCCCGGAAG-TCTCCTCATCCCTCCCAGAAG-TCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253626 23 + 80997621 ---------------CTCCTCATCCCTCCCGGAAG-TCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 233985 36 + 74645514 tgcctcccggaa---gccctcatccctcccagatgccct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221012 38 + 75148670 TGCCTCCCGGAAG-CCTCCTCATGCCTCCCGGATGCCCT i chlSab2.chr16 T 342 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C a score=100375.000000 s hg38.chr17_GL383563v3_alt 354176 70 + 375691 CCTCATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCCCCACATCCCTCCCAGAAGCCCTCCTC s panTro4.chr17 312755 70 + 82630442 CCTCGTCCCTCCCGGAAGCCGTCCTCGTCCCTCCCGGAAGCCCCCCGTGTCCCTCCCGGAAGCCCCCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212488 70 + 73212453 CCTCATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCTCCTCATCGCTCCGGGAAGCCCTCCTC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245892 69 + 80904711 CCTCATGCCTCCCGGAAG-TCTCCTCATCCCTCCCGGAAGCCCttatcatccctcccagaagccttcctc i rheMac3.chr16 C 0 T 299 s macFas5.chr16 253649 69 + 80997621 CCTCATGCCTCCCAGAAGCCCTCCTCATCCCTGCCGGAAGCCCCC-TCATGCCTCCCAGAAGCCCTCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234021 70 + 74645514 cctcatccctcccagaagccctcctcatccctcccggaagccctcctcatccctcccggaaaccctcctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221050 68 + 75148670 CCTC-TGCCTCCCGGAAGCCCTCCTCGTGCCTCCCGGATGCCCTCCTC-TGCCTCCCGGAAGCTCTCCTC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318366 314 - 81552678 M a score=21992.000000 s hg38.chr17_GL383563v3_alt 354246 14 + 375691 ATCCCTCCCGGAAG s panTro4.chr17 312825 14 + 82630442 GTCCCTCCCGGAAG i panTro4.chr17 C 0 T 124 s ponAbe2.chr17 212558 14 + 73212453 ATCCCTCCCGGAAG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245662 14 + 80904711 ATGCCTCCCAGAAG i rheMac3.chr16 T 299 C 0 s macFas5.chr16 253718 13 + 80997621 -TGCCTCCCGGAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234091 14 + 74645514 atccctcccggaag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221118 14 + 75148670 GTGCCTCCCGGATG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318366 314 - 81552678 M a score=5903.000000 s hg38.chr17_GL383563v3_alt 354260 12 + 375691 CCCCCCCCCCAC s ponAbe2.chr17 212572 8 + 73212453 ----CCCTCCAC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245676 8 + 80904711 ----CCCTCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253731 7 + 80997621 -----TCTCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234105 8 + 74645514 ----ccctcctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221132 8 + 75148670 ----CCCTCCTC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318366 314 - 81552678 M e panTro4.chr17 312839 124 + 82630442 T a score=109688.000000 s hg38.chr17_GL383563v3_alt 354272 87 + 375691 ATCCCTCCCGGAAGCCCTCCTCATGCTTCCCGGAACCCCTCCTCATCCCTCCCGGAAGCCCCCCTCATGCCTCCCGGAAGC----------CCCCCA s panTro4.chr17 312715 87 + 82630442 GTCCCTCCCGGAAGCCGCCCTCGTCCCTCCCGGAAGCCCTCCTCGTCCCTCCCGGAAGCCGTCCTCGTCCCTCCCGGAAGC----------CCCCCG i panTro4.chr17 T 124 T 44 s ponAbe2.chr17 212580 87 + 73212453 ATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCTCCACATCCCTCCCGGAAGCCCTCCTCATGCCCCCCGGAAGC----------CCTCCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245684 84 + 80904711 ATCCCTGCCGGAAGCCC-CCTCATGCCTCCCAGAAGCCC-TCCTCTGCCTCCCGGAAG-TCTCCTCATGCCTCCCGGAAGC----------CCTCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 253738 85 + 80997621 ATGCCTCCCGGAAGCCCTCCTCATCCCTCCCAGAAGTCT-CCTCATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAG-----------TCTCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234113 94 + 74645514 atccctcccggaagtct-cctc-tgcctcccggatgccctcctcctctctcccggaag-ccttctcatgcctccctgaagcccttctcatgcctcct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221140 85 + 75148670 -TGCCTCCCGGAAGCCT-CCTCATGCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCTCCTCATGCCTCCCGGATGC----------CCTCCT i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318366 314 - 81552678 M a score=78825.000000 s hg38.chr17_GL383563v3_alt 354359 61 + 375691 CATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCCCCACATCCCTCCCAGAAGCC s panTro4.chr17 312758 61 + 82630442 CGTCCCTCCCGGAAGCCGTCCTCGTCCCTCCCGGAAGCCCCCCGTGTCCCTCCCGGAAGCC i panTro4.chr17 T 44 C 0 s ponAbe2.chr17 212667 61 + 73212453 CATGCCCCCCGGAAGCCCTCCTCATGCCCCCCGGAAGCCCTCCTCATCGCTCCGGGAAGCC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245768 60 + 80904711 CATCCCTCCCAGAAG-TCTCCTCATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGTC i rheMac3.chr16 C 0 I 133 s macFas5.chr16 253823 59 + 80997621 CATCCCTCCCGGAAG-TCTCCTCATGCCTCCCGGAAG-TCTCCTCATCCCTCCCGGAAGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234207 59 + 74645514 catgcctcccggaag-tctcctc-tgcctcccggatgccctcctcctctctcccggaagcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221225 59 + 75148670 C-TGCCTCCCGGAAGCCCTCCTC-TGCCTCCCGGAAGCCCTTCTCATCCCTCCCAGAAGCC i chlSab2.chr16 C 0 I 20 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318366 314 - 81552678 M a score=10420.000000 s hg38.chr17_GL383563v3_alt 354420 20 + 375691 CTGCTCATCCCTCCCGGAAG s panTro4.chr17 312819 20 + 82630442 CCCCTCGTCCCTCCCGGAAG i panTro4.chr17 C 0 I 30 s ponAbe2.chr17 212728 5 + 73212453 CTCCT--------------- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 253882 20 + 80997621 CTTCTCATCCCTCCCAGAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234266 19 + 74645514 -ttctcatgcctccctgaag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221304 20 + 75148670 CTCCTCATGCCTCCCGGATG i chlSab2.chr16 I 20 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e rheMac3.chr16 245828 133 + 80904711 I e nomLeu3.chr19 318366 314 - 81552678 M a score=-2142.000000 s hg38.chr17_GL383563v3_alt 354440 13 + 375691 CCCCCCCCCCCAC---------- s ponAbe2.chr17 212733 1 + 73212453 ------------C---------- i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 253902 8 + 80997621 -----CCTTCCTC---------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234285 18 + 74645514 -----cccttctcatccctcctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221324 8 + 75148670 -----CCCTCCTC---------- i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e rheMac3.chr16 245828 133 + 80904711 I e nomLeu3.chr19 318366 314 - 81552678 M e panTro4.chr17 312839 30 + 82630442 I a score=99579.000000 s hg38.chr17_GL383563v3_alt 354453 111 + 375691 ATCCCTCCCGGAAGC---CCTCCTCATGCTTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGCCGTCCTCATgcctcccggaagccctcctca s panTro4.chr17 312869 111 + 82630442 GTCCCTCCCGGAAGC---CCCCCTCGTCCCTCCCGGAAGCACCCCTCGTCCCTCCCGGAAGCCCCCCTCGTCCCTCCCGGAAGCCCTCCTCATCCTTcctggaagccctcctca i panTro4.chr17 I 30 C 0 s ponAbe2.chr17 212734 111 + 73212453 ATCGCTCCGGGAAGC---CCTCCTCATCCCTCCCGGAAGCCCTCCACATCCCTCCCGGAAGCCCTCCTCATGCCTCCCGGAAGCCCTCCTCATCCCTcccggaagccctcctca i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 253910 109 + 80997621 -TGCCTCCCAGAAGCTGTTCTCCTC-T--CTCCCGGAAGCCCTCCTCATCCCTCCCGGAAGTC-TCCTCATGCCTCCCGGAAGCCCttatcatccctcccagaagcccttctca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234303 106 + 74645514 atgcctcccggaag----tctcctc-tgcctcccggatgccctcctcatgcctcctggaagtc-tcctc-tgcctcccggatgccctcctcctctctcccggaag-ccttctca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221332 107 + 75148670 ATGCCTCCCGGAAGC---CCTCCTC-TGCCTCCCGGAAGCCCTTCTCATCCCTCCCAGAAGCCTTCCTC-TGCCTCCAGGAAG-CCTCCTCCTCTCTcccggaag-cctcctca i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e rheMac3.chr16 245828 133 + 80904711 I e nomLeu3.chr19 318366 314 - 81552678 M a score=2061.000000 s hg38.chr17_GL383563v3_alt 354564 3 + 375691 tcg s panTro4.chr17 312980 3 + 82630442 tcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212845 3 + 73212453 tcc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245961 3 + 80904711 tgc i rheMac3.chr16 I 133 C 0 s macFas5.chr16 254019 3 + 80997621 tgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234409 3 + 74645514 tgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221439 3 + 75148670 tgc i chlSab2.chr16 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e calJac3.chrUn_GL286409 1043079 0 - 1291538 C e nomLeu3.chr19 318366 314 - 81552678 M a score=294953.000000 s hg38.chr17_GL383563v3_alt 354567 131 + 375691 ctcccagaagccctcctcatacctcccggaaaccacgacccccacttccaacaccgtccgtgcatttggcccttttggcactttatagacgtggaatcaggca-ggacatgctcctttctgtctcgttcctt s panTro4.chr17 312983 131 + 82630442 ctcccagaagccctcctcatgcttcccggaaaccacgacccccacttccaacaccttccatgcatttggcccttttggcactttatagacgtggaatcaggca-ggacatgctcctttctgtctcgttcctt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212848 131 + 73212453 ctcccggaagccctcctcatgcctcccggaaaccacgaccccgacttccaacaccttccatgcatttggcccttttggcactttatagacgtggaatcaggca-ggacatgctcctttctgtctcgttcctt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 245964 132 + 80904711 ctcccagaagcccttctcatgcctcccagaaaccacgaccccgacttccaacaccttccatgcatttggccctcttggcactttatggatgtggaatcaggcatggacatgctcctttccgtctcattcctt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254022 132 + 80997621 ctcccagaagcccttctcatgcctcccggaaaccacgaccccgacttccaacaccttccatgcatttggccctcttggcactttatggatgtggaatcaggcatggacatgctcctttccgtctcattcctt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234412 132 + 74645514 ctccctGAAGCCCTTCTCATGCCTCCCGGAAACCACGACCCCGACTTCCAACACCTTCCATGCATTTGGCCCTCTTGGCACTTTGTCGATGTGGAATCAGGCATGGACATGCTCCTTTCCGTCTCATTCCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221442 132 + 75148670 ctccctgaagcccttctcatgcctcctggaaaccacgaccccgacttccaacaccttccatgcatttggccctcttggcactttgtcgatgtggaatcaggcatggacatgctcctttccgtctcattcctt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1043079 131 - 1291538 ctcccaggagcctccctcatgcctcccggaagccatgcccctgacttctagcacctgctatgcattctgcccttgctgtactttctagacgtggaatcaggca-ggacaggctcctttatggctcattcctt i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75962688 257 + 122082543 I e canFam3.chr9 15796451 514 - 61074082 I e nomLeu3.chr19 318366 314 - 81552678 M a score=9962.000000 s hg38.chr17_GL383563v3_alt 354698 14 + 375691 ttactcgacattgt s panTro4.chr17 313114 14 + 82630442 ttactcgacattgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212979 14 + 73212453 ttactcgacattgt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 246096 10 + 80904711 ttgctcgaca---- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254154 10 + 80997621 ttgctcgaca---- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234544 12 + 74645514 TTGCTCGACAT--T i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221574 10 + 75148670 ttgctggaca---- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1043210 14 - 1291538 gtgctgaacattgt i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75962945 14 + 122082543 TCACTCTGATTTCT i mm10.chr11 I 257 C 0 e canFam3.chr9 15796451 514 - 61074082 I e nomLeu3.chr19 318366 314 - 81552678 M a score=280344.000000 s hg38.chr17_GL383563v3_alt 354712 121 + 375691 gtttgtgtgattcatccacg-tatgctgtgtggtca--gattgttccttctcacc-acagtggggtgctccattgtctgccttcaccccagtttatgtgtccattctact-gctgataaacattgt s panTro4.chr17 313128 121 + 82630442 gtttgtgtgattcatccacg-tatgctgtgtggtca--gattgttccttctcacc-acagtggggtgctccattgtctgccttcaccccagtttatgtgtccattctact-gctgatagacattgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 212993 121 + 73212453 gtttgtgtaattcatccacg-tatgctgtgtgctca--gattgttccttctcacc-acagtggggtgctccattgtctgccttcaccccagtttatgtgtccattctact-gctgataaacatcat i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 246106 121 + 80904711 --ttgtgtgatttatccacg-tgtgccgtgtggtcacagattgttccatctcagc-acagtggggtgctccatggtcggccttcaccccaatttgtgtgtccattctact-gctggtaaacattag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254164 121 + 80997621 --ttgtgtgatttatccacg-tgtgccgtgtggtcacagattgttccatctcagc-acagtggggtgctccatggtcggccttcaccccaatttgtgtgtccattctact-gctgataaacattag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234556 123 + 74645514 GTTTGTGTGATTTATCCACG-TGTGCCGTGTGGTCACGGATTGTTCCGTCTCAGC-ACAGTGGGGGGCTCCATAGTTGGCCTTCACCCCAATTTGTGTGTCCATTCTACT-GCTGATAAACATTAg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221584 121 + 75148670 --ttgtgtgatttatccacg-tgtgccgtgtggtcacggattgttccatctcagc-acagtggggtgctccatggtcggccttcaccccaatttgtgtgtccattctact-gctgataaacattag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1043224 124 - 1291538 gtctgtgtgattcatccttgctgtgctgtgtgggcacagatggttccttttcacc-acggtgcagcgctctattgtctgtcttcaccccaatttgtgtgtccattctgcc-gctgataaacaccgg i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75962959 89 + 122082543 GCTTGTGTGACTCCTGCAGC-CGTT-------------GACTGCTCATTCTCACCTGCAATG--GTGTTCTAGTGTCTGCAGTTGTCCTGGTTTCTAAGG--ACTCT------------------- i mm10.chr11 C 0 I 1 s canFam3.chr9 15796965 125 - 61074082 gtttgtgtgatacattcacattgttccatgtgcctgtccattgttcatcctcact-gttgtagagcattttatcctgtgtattccccccaatttatttgttcattctactggcagttggatattgg i canFam3.chr9 I 514 C 0 e nomLeu3.chr19 318366 314 - 81552678 M a score=261064.000000 s hg38.chr17_GL383563v3_alt 354833 95 + 375691 aggatttccctggggggtggatttggctattacaaatagtgctgctatgaacattct-agtatatgccttttCACTGCA-ACCCAT---CCTAAAATATA s panTro4.chr17 313249 95 + 82630442 aggatttccgtggggggtggatttggctattacaaatagtgctgctatgaacattct-agtatatgccttttCACTGCA-ACCCAT---CCTAAAATATA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 213114 95 + 73212453 aggatttccgtgggggatggatttggctattacaaatagtgctgctatgaacatcct-agtatatgccttttCACTGCA-ACCCAT---CCTAAAATATA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318691 93 - 81552678 AGGACTTCCG-GCCGGGGGCATAtggctattacaaatagtgctgctatgaacattct-agtatatgcc-tttcactgca-ACCCAT---CTTAAAATATA i nomLeu3.chr19 M 314 C 0 s rheMac3.chr16 246227 94 + 80904711 ggggcttccg-ggggtggggggttggctattacaaatagtgccgctatgaacattct-agtatatgccttttCACTGTA-ACCCAT---CCCAAAATACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254285 94 + 80997621 ggggcttccg-ggggtggggggttggctattacaaatagtgccgctatgaacattct-agtatatgccttttCACTGTA-ACCCAT---CCCAAAATACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234679 94 + 74645514 ggggcttccg-ggggtggggggttggctattacaaatagtgcCGCTGTGAACATTCT-AGTATATGCCTTTTCACTGTA-ACCCAT---CCTAAAATACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221705 94 + 75148670 ggggcttccg-ggggtggggggttggctattacaaatagtgctgctatgaacattct-agtatatgccttttCACTGCA-ACCCAT---CCTAAAATACA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1043348 85 - 1291538 -aggcttcca-gcggggtttttctagccatcata-----tactgctatgaacattcc-agtgcatgccttttCACTGCA-A-ACAT---CCTAAAAT--G i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75963049 83 + 122082543 AGTCCTTTCT-----GGTTTAATTGGTTATT--TAGCAATGTCAGTCTGAACCCTCTCAGAACATGCCTTTCCACTGTG-AGGCAT---T------GATA i mm10.chr11 I 1 C 0 s canFam3.chr9 15797090 92 - 61074082 gtgatttctg-gtgg------tttggctattatgaatagcgctgctataaacattcg-agtacatgccttttcaccacagactcgtgcccttAAGACATA i canFam3.chr9 C 0 I 153 a score=217501.000000 s hg38.chr17_GL383563v3_alt 354928 67 + 375691 CATCAT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGCCAATGTGCCCCACCTCTCCAATT s panTro4.chr17 313344 67 + 82630442 CATCAT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGCCAATGTGCCCCACCTCTCCAATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 213209 67 + 73212453 CATCAT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGCCAGTGTGCCCCACCTCTCCAATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318784 67 - 81552678 CATCAT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGCCAATGGGCCCCGCCTCTCCAGTT i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 246321 67 + 80904711 CATCGT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGTCAATGTACTTCCCCCCTCCAGTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254379 67 + 80997621 CATCGT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGTCAATGTACTTCCCCCCTCCAGTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234773 67 + 74645514 CATCGT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGTCAATGTACTCCCCCGCTCCAGTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221799 67 + 75148670 CATCAT----------------------------------------------------------------TGAAAACTACTGCTTTAAGCCTCAAATCTTGGGAAAGTCAATGTACTCCCCCCCTTCAGTC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1043433 66 - 1291538 CCTCAC----------------------------------------------------------------TGAAAACTACTGCTTTCAGCCTCAAGTCTTGGGAAAGCCAA-GTGCCCCACCTCTCCTATT i calJac3.chrUn_GL286409 C 0 I 284 s mm10.chr11 75963132 66 + 122082543 CAGTGT----------------------------------------------------------------TGAAAATGACTGCTCTACACCTTGGATCTTAGAGCAGCCGGCCTGTTCAGCCTCCCCGTT- i mm10.chr11 C 0 C 0 s canFam3.chr9 15797335 130 - 61074082 cattatgtctctctctcatatgaataaaatctttTTTAGGGGTAAACTAAAAAAGAAAGAAAGAAAATGATGAAGACTGCTGCTTTAAGCCTC-AGTGTTGAGAAAGTCAACCTGCCCAACCCCTCCAATT i canFam3.chr9 I 153 C 0 a score=264255.000000 s hg38.chr17_GL383563v3_alt 354995 82 + 375691 TACCCTTTCATTCTTTAAACATGGTCCTTCCACTGTCTACAG-AGCACCATGTAAAGGGTA----------------------------------------------------------------------------TTGGCCATCTCCTTGAAGTCTG s panTro4.chr17 313411 81 + 82630442 TACCCTTTCATTCTTCAAACATG-TCCTTCCACTGTCTACAG-AGCACCATGTAAAGGGTA----------------------------------------------------------------------------TTGGCCATGTCCTTGAAGTCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 213276 82 + 73212453 TACCCTTTCATTCTTTAAACATGGTCCTGCCACTGTCTACAG-AGCACCATGTAAAGGGTA----------------------------------------------------------------------------TTGGCCATCTCCTTGAAGTCTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 318851 86 - 81552678 TACCCTTTAATTCTTTAAACATGGTCCTTCCACTGTCTACAG-AGCACCATGTAAAGGGTG------------------------------------------------------------------------CTCCTTGGCCATCTCCTTGAAGTCTA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 246388 82 + 80904711 TACCCTTTCATTCTTTAAACATGGTCCTTCCACTGTCTACAG-AGCACCATGTAAAGGGTA----------------------------------------------------------------------------CTGGCCATCTCCTTGAAGTCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254446 82 + 80997621 TACCCTTTCATTGTTTAAACATGGTCCTTCCACTGTCTACAG-AGCACCATGTAAAGGGTA----------------------------------------------------------------------------CTGGCCATCTCCTTGAAGTCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 234840 82 + 74645514 TACCCTTTCATTCTTTAAACATGGTCCTTTCACTGTCTACAG-AGCACCGTGTAAAGGGTA----------------------------------------------------------------------------CTGGCCATCTCCTTGAAGTCTg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 221866 82 + 75148670 TACCCTTTCATTCTTTAAACGTGGTCCTTCCACTGTCTACAG-AGCACCATGTAAAGGGTA----------------------------------------------------------------------------CTGGCCATCTCCTTGAAGTCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1043783 82 - 1291538 TACCCTTTCACTCTTTAAATGTGGTCCTTCCATTGTCTACAG-AGCACCATGTAAAGAGTA----------------------------------------------------------------------------TTGGCCATCTCCTTAAAGTCCG i calJac3.chrUn_GL286409 I 284 C 0 s mm10.chr11 75963198 66 + 122082543 CACCATTTCAGTCTTAAACCACAGCCCTTCCATTGACCATAC-AGCAGCACAT--AGAGTC----------------------------------------------------------------------------TTAGCCAC-------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15797465 159 - 61074082 TTCCCTTTCATGCTTTAAACACAGTCCCTCCACGGGCTACAACAACACCTCATCGgggatcccctgggttgctcagcggtttggcgcctgcctttggcccagggtgcgatcctggagtcccgggatcgagtccctcctcggctccctgcatggagcctg i canFam3.chr9 C 0 I 105 a score=41129.000000 s hg38.chr17_GL383563v3_alt 355077 21 + 375691 GGTAATAAAAAGATG--AAAAAA------------- s panTro4.chr17 313492 23 + 82630442 GGTAATAAAAAAATGGAAAAAAA------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 213358 21 + 73212453 GGtaataaaaaaatg--aaaaaa------------- i ponAbe2.chr17 C 0 I 1446 s nomLeu3.chr19 318937 21 - 81552678 GGTaataaaaaaatg--aaaaaa------------- i nomLeu3.chr19 C 0 I 11 s rheMac3.chr16 246470 21 + 80904711 GGtatttaaaaaatg--aaaaaa------------- i rheMac3.chr16 C 0 I 7 s macFas5.chr16 254528 21 + 80997621 GGTatttaaaaaatg--aaaaaa------------- i macFas5.chr16 C 0 I 7 s papAnu2.chr16 234922 21 + 74645514 ggtatttaaaaaatg--aaaaaa------------- i papAnu2.chr16 C 0 I 7 s chlSab2.chr16 221948 21 + 75148670 GGTATTTAAAAAATG--AAAAAA------------- i chlSab2.chr16 C 0 I 7 s calJac3.chrUn_GL286409 1043865 11 - 1291538 GGtattaaaaa------------------------- i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15797729 34 - 61074082 tgaattaaaaaaata--aataaatcttaaaaaaaaa i canFam3.chr9 I 105 C 0 e mm10.chr11 75963264 0 + 122082543 C a score=406051.000000 s hg38.chr17_GL383563v3_alt 355098 160 + 375691 AAATT----------TTTTA---AAGACTATTGGCCAAAggagtcagactttctaggactaaagttccctccttgctgtgtgtctttggacaaacactcaacctctct-gtgcagcagttttcttacct----gtaaca-tgggaatagtac-------tctaacatcatttggctgaggtttaaa s panTro4.chr17 313515 160 + 82630442 AAATT----------TTTTA---GAGACTATTGGCCAAAggagtcagactttctaggactaaagttccctccttgctgtgtgtctttggacaaacactcaacctctct-gtgcatcagttttcttacct----gtaaca-tgggaatagtac-------tctaacatcatttggctgaggtttaaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 318969 157 - 81552678 aaaTT----------TTTAA-AGAAGACTATTGGCCAAAggagccagactttctaggactaaagtcccctccttgctgtgtgtctttggacaaacactcaacttctct-gtgcatcagttt-----cct----gtaaaa-tgggaatagtac-------tctaacatcatttggctgaggtttaaa i nomLeu3.chr19 I 11 C 0 s rheMac3.chr16 246498 172 + 80904711 aaatttttttttaaatttta-aGATTACTATTGGTCAAAggagtcagactttctaggactaaagtcccctccttgctgtgtgtctttggacaaacactgaacctctct-gtgcatcagtttccttacct----gtaaaa-tgggactagtac-------tctaacatcatctggctgaggtttaaa i rheMac3.chr16 I 7 C 0 s macFas5.chr16 254556 172 + 80997621 aaatttttttttaaatttta-agattACTATTGGTCAAAggagtcagactttctaggactaaagtcccctccttgctgtgtgtctttggacaaacactgaacctctct-gtgcatcagtttccttacct----gtaaaa-tgggactagtac-------tctaacatcacctggctgaggtttaaa i macFas5.chr16 I 7 C 0 s papAnu2.chr16 234950 165 + 74645514 aatttttt-------tttta-agattactATTGGCCAAAGGAGTCAGACTTTCTAGGACTAAAGTCCCCTCCTTGCTGTGTGTCTTTGGACAAACACTGAACCTCTCT-GTgcatcagtttccttacct----gtaaaa-tgggactagTAC-------TCTAACATCATCTGGCTGAGGTTTAAA i papAnu2.chr16 I 7 C 0 s chlSab2.chr16 221976 172 + 75148670 AAATTTTTAAAAAAATTTTA-AGATTACTATTGGCCAAAggagtcagactttctaggactaaagtcccctccttgctgtgtgtctttggacaaacactgaacctctct-gtgcatcagtttccttacct----gtaaaa-tgggactagtac-------tctaacatcatctggctgaggtttaaa i chlSab2.chr16 I 7 C 0 s calJac3.chrUn_GL286409 1043876 178 - 1291538 aaattttttttttaattaaaaaGAAGACTACTGGCCAAAGGAGTGGAACTTTCTAGGACTAAAgtcccctacttgttgtgtgtctttggacaaacactcaatctctct-gtgcaccagcttccttaccttaccttagcattagtaatagtac-------tctaacatcatttggctgaggtttaaa i calJac3.chrUn_GL286409 C 0 I 796 s mm10.chr11 75963264 129 + 122082543 -------------------------------------AAGGA--CAGTCATTccagg------------tacttgctgtgtgttatctggcaaatgcttaacttctctggggcatcagttt-cttacct----gcaaag-tggggataacgctaatagttctaacttcccttggcagagaattaaa i mm10.chr11 C 0 I 2 s canFam3.chr9 15797763 155 - 61074082 ------------aCACCTCA-TCAAGGACACTGGCCACAGGAGCCACACTTCCTAGGacta-----------ttgctgtg-gtccttgggcaagcactctgcttctct-atacatcaatttcctcacct----ataaaa-tgggaatgataagagtattttaaacttcattcagttgaagagtgaa i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 213379 1446 + 73212453 I a score=43638.000000 s hg38.chr17_GL383563v3_alt 355258 17 + 375691 caagGGAGCAGCATCTG s panTro4.chr17 313675 17 + 82630442 caaaggagcagcgtctg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 319126 17 - 81552678 caagagagcagcatctg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 246670 17 + 80904711 caagGGAGCAGCGTCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254728 17 + 80997621 caagGGAGCAGCGTCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 235115 17 + 74645514 CAAGGGAGCAGCGTCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 222148 17 + 75148670 caagGGAGCAGCGTCTG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75963395 17 + 122082543 aaaggaaactgcatctg i mm10.chr11 I 2 I 448 s canFam3.chr9 15797918 17 - 61074082 taagggaacagtgtgta i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1044054 796 - 1291538 I e ponAbe2.chr17 213379 1446 + 73212453 I a score=253266.000000 s hg38.chr17_GL383563v3_alt 355275 126 + 375691 CACAAGGTGAGCACTC-ATCAGTGTTCATAGCAATGATTCCTGCTGAAGGTATCCTGTCTTTCTCAACACCCCTGCAGTACCCTGCTCTGGGCGTCCCCTGCCCGGATATCTGTGAGCAACGTCCTC s panTro4.chr17 313692 126 + 82630442 cacaaggtgagcactc-atcagtgttCATAGCAATGATTCCTGCTGAAGGTATCCTGTCTTTCTCAACACCCCTGCGGTACCCTGCTCTGGGCGGCCCCTGCCCGGATATCTGTGAGCAACGTCCTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 319143 126 - 81552678 cacaaggtgagcactc-atcagtgttCATAGCAATGATTCCTGCTGAAGGTATCCTGTCTTTCTCAACACCCCTGCAGTACCCTGCTCTGGGCGGCCCCTGCCCGGATATCTGTGAGCAAGGTTCTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 246687 126 + 80904711 CACAAGGTGAGCCCTC-ATCAGTGTTCACAGCAACGATTCCCGCTGAAGGTTTCCCGTCTTTCTCAACACCCCTGTGGTAGCCTGCTCTGGGCGTCCCCTGCCTGGATATCTGTGAGCAAGGTCCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254745 126 + 80997621 CACAAGGTGAGCCCTC-ATCAGTGTTCACAGCAATGATTCCCGCTGAAGGTTTCCCGTCTTTCTCAACACCCCTGTGGTAGCCTGCTCTGGGCGTCCCCTGCCTGGATATCTGTGAGCAAGGTCCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 235132 126 + 74645514 CACAAGGTGAGCCCTC-ATCAGTGTTCACAGCAACGATTCCCGCTGAAGGTTTCCTGTCTTTCTCAACACCCCTGCGGTAGCCTGCTCTGGGCGTCCCCTGCCTGGATATCTGTGAGCAAGGTCCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 222165 126 + 75148670 CACAAGGTGAGCCCTC-ATCAGTGTTCACAGCAACGATTCCCGCTGAAGGTTTCCCGTCTTTCTCAACACCGCTGTGGTAGCCTGCTCTGGGTGTCCCCTGCCTGGATATCTGTGAGCAAGGTCCTC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15797935 120 - 61074082 cacatagtaagtgctcaaccaacgtcagCAGCTATGAGGCCTGCCAAAGGCCTC----CTTCCTGAGCGCCCCTGAGGCATCCTGCTTTGGGCAGCCCTTGCAAGAGAGC---TGAGTAAGGCTCTA i canFam3.chr9 C 0 C 0 e mm10.chr11 75963412 448 + 122082543 I e calJac3.chrUn_GL286409 1044054 796 - 1291538 I e ponAbe2.chr17 213379 1446 + 73212453 I a score=341530.000000 s hg38.chr17_GL383563v3_alt 355401 151 + 375691 AAAGAAAAGGAGATCGCAACTGAGGACAAGCAACTCTACCATCTCCAGCTAGAGCTGAGCTCCACCAGCAAGCCCTCCCTTCCACGCCAGATCACTCCTGTCCCTCAGCC----TCTCCAGG---CATC-AGAGATGTGTGGCGGCCGCAGCTACTGTC s panTro4.chr17 313818 155 + 82630442 AAAGAAAAGGAGATGGCAACTGAGGACAAGCAACTCTACCACCTCCAGCTGGAGCAGAGCTCCACCAGCAAGCCCTCCCTTCCACGCCAGATCACTCCTGTCCCTCAGCCAGCCTCTCCAGG---CATC-AGAGATGTGTGGCGGCCGCAGCTACTGTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 319269 129 - 81552678 AAAGAAAAGGAGATCGCAACTGAGGACAAGCAACTCTACCACCTCCA---------------------CAAGCCCTCCCTTCCACACCAGATCACTCCTGTCCCTCAGCC----TCTCCAGG---CATC-AGAGATGCGTGGTGGCCGCAGC-ACTGTC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 246813 150 + 80904711 AAAGAAAAGGAGATGGCAACTGAGGACAAGCAACTCTACCACGTCCAGCTGGAGCGGAGCCCCACCAGCGAGCCCTCCCCTCCACGCCAGATCGCTCCCATCCCTCAGCC----TCTCCAGA---CATC-AGAGATGCACGGCAGCAGCAGCTACTGT- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 254871 150 + 80997621 AAAGAAAAGGAGATGGCAACTGAGGACAAGCAACTCTACCACGTCCAGCTGGAGCGGAGCCCCACCAGCGAGCCCTCCCCTCCACGCCAGATCGCTCCCATCCCTCAGCC----TCTCCAGA---CATC-AGAGATGCATGGCGGCAGCAGCTACTGT- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 235258 150 + 74645514 AAAGAAAAGGAGATGGCAACTGAGGACAAGCAACTCTACCACGTCCAGCTGGAGCGGAGCCCCACCAGCGAGCCCTCCCCTCCACGCCAGATCGCTCCCGtccctcagcc----tctccagg---catC-AGAGATGCGTGGCAGCAGCAGCTACTGT- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 222291 150 + 75148670 AAAGAAAAGGAGATCGAAACTGAGGACAAGCAACTCTACCACCTCCAGCTGGGGCGGAGCCCCACCAGCGAGCCCTCCCCTCCACGCCAGATGGCTCCCGTCCCTCAGCT----TCTCCAGG---CAGC-AGAGATGCGTGGCAGCAGCAGCTACTCT- i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1044850 154 - 1291538 aAAGGAAAGGAGTCAGCAACTGAGAACAAGCAAAATTACCACCTCCAGCCGGAGCAGAGCTCCACCAGCAAGGCCTCCCCTCCACGCCAGATCACTCCCATCCCTCAGCC----TCTCCAGGCATCATC-AGAGATGCACACTGCTCGCAGCGACTGTC i calJac3.chrUn_GL286409 I 796 C 0 s canFam3.chr9 15798055 142 - 61074082 ---ACACAAGAGACAGCAACAGAAGA----CAATTTCACCACCTCCACGTGGAGCAGAGCTGCACCAAAAAGCCCTGCCCACCACACCAAACCACTCTCTCTCCT--GCC----TTTCCTGT---CATTAAGGGATAAGTGGTGGCCACAGCTCCTGC- i canFam3.chr9 C 0 C 0 e mm10.chr11 75963412 448 + 122082543 I e ponAbe2.chr17 213379 1446 + 73212453 I a score=1669434.000000 s hg38.chr17_GL383563v3_alt 355552 648 + 375691 CTTTCATGCATGAGGCACTGGATGTCACTCA-AAATGGGACCTCGACCACAGTGACTTTGCTGGGGTCATTATTAATGG--TGTGCCAGCGGCCTGATGACAACCTGCTGGGGCACCCAAAGTACCCAAAAATCACTGCCTGG--GAAAAA---AATGTTTTTAAATGTTGATGCAAAAGAAGAGTGAACTGGAGTATTTT-GTTTTTTTAGATGACAAAGACGGAAGAAATCCCCTCAAAGCATACAGTGCA-AGAGGCCCAGGAGCAGGAGATTCCA-GCCTTGCAAGACCGGTTGCCATGGTAACCGTGTTTCACAGCAGGAGTTCGTTTTCATATGACAGTGACCTGCACAGAGAAGGGAAGGACGGAAGGA-------CGTCTCCTAAAGAAACTTAGTTGAAGGCTTTCCCATTT--GGGGTGAGG-GGAGTTAGTTTTGTTTAC-----AAAAAAAGGGCATTTTAAGGTGCCTTAagaggcaga---------aatgatcccagggccct-----------tgcaaggttctctctattcacaactcttacttaaggca-------------------aga-cagaaaaacacggcctgtttccaaggcctcctggggctgatgtc--atagcctccctgg---atcactggtcccatcattaaccatctgtttg-ttacaaagtccttt-cctGGAGTCCAGCAGAGTCCca s panTro4.chr17 313973 639 + 82630442 CTTTTATTCATGAGGCACTGGATGTCACTCA-AAATGGGACCTCGACCACAGTGACTTTGCTGGGGTCATTATTAATGG--TGTGCCAGCGGCCTGATGACAACCTGCTGGGGCACCCAAAGTACCCAAAAATCACTGCCTGG--GAAAAA---A-TGTTTTTAAATGTTGATGCAAAAGAAGAGTGAACTGAAGTATTTT-GTTTTTTTAGATGACAAAGACAGAAGAAACCTCCTCAAAGCATACAGTGCA-AGAGGCCCAGGAGCAGGAGATTCCA-GCCTTGCAAGACTGGTTGCCATGGTAACCGTGTTTCACAGCAGGAGTTCGTTTTCATATGACAGTGACCTGCACAGAGAAG--------GGAAGGA-------CGTCTCCTAAAGAAACTTAGTTGAAGGCTTTCCCATTT--GGGGTGAGG-GGAGTTAGTTTTGTTTAC-----AAAAAAAGGGCATTTTAAGGTGCCTTAAGAGGCAGA---------AATGATCCCAGGGCCCT-----------TGCAAGGTTCTCTCTATTCACAACTCTTACTTAAGGCA-------------------AGA-CAGAAAAACACGGCCTGTTTCCAAGGCCTCCTCGGGCTGATGTC--ATAGCCTCCCTGG---ATCACTGGTCCCATCATTACCCATCTGTTTG-TTACAAAGTCCTTT-CCTGGAGTCCAGCAGAGTCCCA i panTro4.chr17 C 0 M 1806 s nomLeu3.chr19 319398 641 - 81552678 CTTTTACGCATGAGGCACTGGATGTCACTCA-AAATGGGACCTCGACCACAGTGACTGTGCTGGGGTCATTATTAATGG--TATGCCAGCGGCCTGGTGACAATCTGCTGGGGCACCCAAAGTACCCAAAAATCACTGCCTGG--GAAAAA---A-TGTTTTTAAACGTTGATGCAAAAGAAGAGTGAACTGGAGTATTTT-GTTTTTTTAGATGACAAAGACGGAAGAAGCCCCCTCAAAGCATACAGTGCA-AGAGGCCCAGGAGCAGGAGATTCCG-GCCTTGCAAGACTGGTTGCCATGGTAACCGTGTTTCACAGCAGGAGCTTGTTTTCGTATGACAGTGACCCGCACACAGAAG--------GGAAGGA-------CGTCTCCTAAAGAAACTTAGTTGAAGGCTTTCCCATTT--GGGGTGAGG-GGAGTTAGTTTTGTTTACAAAAAAAAAAAAAGGCATTTTAAGGTGCCTTAAGAGGCAGA---------AATGATCCTAGGGCC-------------TGCAAGGT--TCTCTATTCACAACTCTTACTTAAGGCA-------------------AGA-CAGAAAAACACCGCCTGTTTCCAAGGCCTCCT-GGGCTGATGTCATATAGCCTCCCTGG---ATCACTGGTCCCAACATCAACCATCTGTTTG-TTACAAAGTCCTTT-CCTGGAGTCCAGCAGAGTCTca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 246963 624 + 80904711 ----------------ACTGGATGTCACTCA-AAATGGGACCTCGACCACGGTCACTGTGCTGGGGTCATTATTAATGG--TGTGCCAGCGGCCTGGTGACAACCTGCTGGGGCACCCAACGTACCCAAAAATCACTGCCTGGAAAAAAAA---AATGTTTTTAAACGTTGATGCAAAAGAAGAGTGAAGAGGAGTATTTTGGTTTTTTTAGATGACAAAGACGGAAGAAACCCCCTCAAAACATACAGTGCA-AGAGGCCCAGGAGCAGGAGATTCCG-GCCTTGCGAGACTGGTTGCCATGGTAACCGTATTTCACAGCAGGAGCTCGTTTT--TATGACAGTGACCCGCACACAGAAG--------GGAAGGA-------CGTCTCCTGAAGAAACTTAGTTGGAGGCTTTCCCATTT--GGGGTGAGG-GGAGTGAGTTTTGTTAGA-----AAAGAAAAGGCATTTCAAGGTGCCTTACGAGGCAGA---------AATGATCCCAGGACCCT-----------TGCAAGGTTCTCTCTATTCACAGCTCTTACTTAAGGCA-------------------AGA-CAGAAAAA-ACGGCCTGTTTCCAAGGCGTCCTGGGGTTCATGTC--ATAGCCTCCCTGG---ATCACTGGTCCCATCATTAACCATCTGTTTG-TTACAAAGTCCTTT-CCTGGAGTCCAGCAGAGTCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 255021 623 + 80997621 ----------------ACTGGATGTCACTCA-AAATGGGACCTCGACCACGGTCACTGTGCTGGGGTCATTATTAATGG--TGTGCCAGCGGCCTGGTGACAACCTGCTGGGGCACCCAACGTACCCAAAAATCACTGCCTGG-AAAAAAA---AATGTTTTTAAACGTTGATGCAAAAGAAGAGTGAAGAGGAGTATTTTGGTTTTTTTAGATGACAAAGACGGAAGAAACCCCCTCAAAACATACAGTGCA-AGAGGCCCAGGAGCAGGAGATTCCG-GCCTTGCGAGACTGGTTGCCATGGTAACCGTATTTCACAGCAGGAGCTCGTTTT--TATGACAGTGACCCGCACACAGAAG--------GGAAGGA-------CGTCTCCTGAAGAAACTTAGTTGGAGGCTTTCCCATTT--GGGGTGAGG-GGAGTGAGTTTTGTTAGA-----AAAGAAAAGGCATTTCAAGGTGCCTTACGAGGCAGA---------AATGATCCCAGGACCCT-----------TGCAAGGTTCTCTCTATTCACAGCTCTTACTTAAGGCA-------------------AGA-CAGAAAAA-ACGGCCTGTTTCCAAGGCGTCCTGGGGTTCATGTC--ATAGCCTCCCTGG---ATCACTGGTCCCATCATTAACCATCTGTTTG-TTACAAAGTCCTTT-CCTGGAGTCCAGCAGAGTCcca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 235408 622 + 74645514 ----------------ACTGGATGTCACTCA-AAATGGGACCTCGACCATGGTCACTGTGCTGGGGTCATTACTAATGG--TGTGCCAGCGGCCTGGTGACAACCTGCTGGAGCACCCAACATACCCAAAAATCActgcctgg--aaaaaa---aatgtttttaaacgtTGATGCAAAAGAAGAGTGAAGAGGAGTATTTTGGTTTTTTCAGATGACAAAGACGGAAGAAACCCCCTCAAAACATACAGTGCA-AGAGGCCCAGGAGCAGGAGATTCCG-GCCTTGCGAGACTGGTTGCCACGGTAACCGTATTTCACAGCAGGAGCTCGTTTT--TATGACAGTGACCCGCACAGAGAAG--------GGAAGGA-------CGTCTCCTGAAGAAACTTAGTTGGAGGCTTTCCCATTT--GGGGTGAGG-GGAGTGagttttgttaga-----aaagaaaaggcattttaagGTGCCTTACGAGGCAGA---------AATGATCCCAGGACCCT-----------TGCAAGGTTCTCTCTATTCACAGCTCTTACTTAAGGCA-------------------AGA-CAGAAAAA-ACAGCCTGTTTCCAAGGAGTCCTGGGGTTCATGTC--ATAGCCTCCCTGG---ATCACTGGTCCCATCATTAACCATCTGTTTG-TTACAAAGTCCTTT-CCTGGAGTCCAGCAGAGTCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 222441 596 + 75148670 ----------------ACTGGATGTCACTCA-AAATGGGACCTCGACCACGGTCACTGTGCTGGGGTCATTATTAGTGG--TGTGCCAGCGGCCTGGTGACAACCTGCTGGGGCACCCAACGTACCCAAAAATCACTGCCTGG--AA----------------------------AAAAGAAGAGTGAAGAGGAGTATTTTGGTTTTTTTAGATGACAAAGACGGAAGAAACCCCCTCAAAACATACAGTG-A-AGAGGCCCAGGAGCAGGAGATTCCG-GCCTTGCGAGACTGGTTGCCATGGTAACCGTATTTCACAGCAGGAGCTCGTTTT--CATGACAGTGACCCGCACAGAGAAG--------GGAAGGA-------CGTCTCCTGAAGAAACTTAGTTGGAGGCGTTCCCATTT--GGGGTGAGG-GGAATGAGTTTTGTTACA-----AAAGAAAAGGCATTTTAAGGTGCCTTAAGAGGCAGA---------AATGATCCCAGGGCCCT-----------TGCAAGGTTCTCTCTATTCACAGCTCTTACTTAAGGGA-------------------AGA-CAGAAAAA-AAGGCCTGTTTCCAAGGCGTCCTGGGGTTAATGTC--CTAGCCTCCCTGG---ATCACTGGTCCCATCATGAACCATCTGTTTG-TTACAAAGTCCTTT-CCTGGAGTCCAGCAGAGTCcca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1045004 627 - 1291538 CTTTTATGCATGGGGCACTGGATGTCACTCA-AAACGGGACCTCAGCCAGGGTCACCGTGCTGGGGTCA-TATTAACGG--TGTGCCAGCAGCCTGCTGACAACCTGCTTTGGCACCAAAAGTACCCAAAAATCACTGCCTGG--AGAAAA---A-TGTTTCTCAATGTTGATGCAAAAGAAGAATGAAAAGGGGTATTTT----ATTTTAGATGACAAAGATGGAAAAAGCCCTCTCAAAGCTTACAGTGCC-AGAGACCCAGGAGCA--AGATTCCA-GCCTCCC--TACCAGTCGCCATGGCAACCGCACTTCACAGCAGGAGCTAATTTTCATATGACAGTGACCTGCAGAGAGAAG--------GGAAGGGGGAAGACCATCTCCTAAAGA----CAGTTGAAGGTTTTCCTATTT--GGGGTGAGG-GGGTTTAATCTTGTTTAC----CAAAAACACGGCATTTTAA--------AAGGGGCAGA---------AATGATCCCGGGGCCCT-----------CACGAGGTTCTCTCTATTCACAACTCTTACTTAAGGCA-------------------AGA-CAGAAAAAAACGGCCCGTTTCCAAGGCCTCCTGCGGCTGATACC--ACAGCCTCCCTGG---ATCATGGGTCCTATCATGAACCATCCGTCTG-TTACAAAGTCCTTT-CCTGGAGACCACCAGAGTCCCA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75963860 633 + 122082543 CTTTTACCCATGGAGCACTGGGTGTCACTCATAAATGTGACCTAAACCAGGGTCATCACCCTGGGGTCATGACTAATGG--TGCGCCAACTGCCTGGCAACAACCTGCTGGGACACAAACAGTACCCAGAAGTCACTGGTTTG--AAGAAAC--AAAAGAATTTAATATCTACACAAAAGGAAAGCGAAGCGGAATATTTC-ATTTCTTCAGGCAGCAAACACAGAAAAAG-CCCCTCCGAGCACATAGTGCAGAGAGACCTAGGAGCAGGAGACTTGG-GCCTCGCACTATCGGTTGCTATGGTAACAGGATTTCACAGCAGGAGCTCATTTTCCTCTGACAGTGGCCTGCA-AAAGAAG--------GGAAGGA-------GGCCTCCTAAAGAAACTTATTTGAAGGCTC-------------AAAAGG-GGGACTGAAAGTGTCCCT-----CAGGGATGGGCACTTAGGGAACGCTGGAAGGGCAGA------CCGGAGGACCTCCACCCCCTCACCCCCACCCCGCAGAGCTCTTTAC-TCCACAGTTC-----TAAAGCC-------------------AGATCAGAA----ACAGCTTGTTTCCAGGGCCTCCC-TGACTGATGTC--ACAACCTCTCGAGTCAAGCAAGGATCCT---ATTCCCCATCTGTCTG---ATCAAGTCCTTTCCCTAGAGTCCAGAAGAGTCCCA i mm10.chr11 I 448 C 0 s canFam3.chr9 15798197 630 - 61074082 --------------GCCATGGACCGCACTCA-AAATATGACCTAAACCAGGGACACTGGTCTAGGGTCATTATTAATGGCCTGTGCCGGCAGCCCAGTAACAAGCTCCTGGAGCACC--AAGTATCCAGAGACCAGGGCCTGA--AAAAACCCTGAAATTTTTCAGTGTTTATGAGAAGGGAGACTGAAGCGTAGCATTTT--GTGCTTTAGGCGACAGAGATGGAAACCA-CCCCTTGAAGCTTACAGTG-G-GAAGACCTCAGAGCAAGAGACTCAGAGCCTCACACTAGTGGTTGCCATGGCAACCGTGTTTCACAGCAGGAATTCATTTTCATATGACAGTGACCTGCAGAGGGAA---------GAAAGGA-------CT-------AGGAAACTTCATTGAAGGAGGTACTGTTTAGAGGGTGGGGTGGGGTTGATTTTGTTTAC-----CAAAAAA--GCCTGTGAAAGTGCCT-AAGGGACAGACAGGACCCAAACGACCTGAGGGCCC------------TGCAGCATTCTTTGTA-CCACAACTTTTACTTAacacacacacacacacacacacacaca-cacacacaGATGTCCTGTTTCTAAGGCCTCA--GGGCAGATGTC--ACAGCCT----GA---GTCATTTGTCCCACCATTAACCATCTGTTTGGTTACAAAGTCTTTT-CCTGGAGTCCCA---------- i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 213379 1446 + 73212453 I a score=512168.000000 s hg38.chr17_GL383563v3_alt 356200 239 + 375691 agcaagcaagcaaccaaccgagcCACCAGGAAGTCCTGCACACCTGGGCCAGGGGCTGAGAAGACAT-GGAA---ATGTAACACACACTCCCTGGACTGAAAAACA---CGCCTTCCTGGACAAACGGCAAATCCTAGCATCTAAAAacagccttaggagtcagacagacttgagttccagcctccaccttggccacctatatgc---tgtgtgatttaggaaggtctctggccct--ctc-------tgtg-----tcctta s nomLeu3.chr19 320039 238 - 81552678 agcaagcaagcaatcaaccgagcCACCAGGAAGTCCTGCACACCTGGGCCGGGGGCTGAAAAGACAC-AGAA---GTGTAACACACACTCCCTAAACTGAAAAACA---CGCCTTCCTGGACAAACAGCAAATCCTAGCATCTgaaaacagccttgggagtcaggcagacttgagttccagcctccgccttggccacctatatgc---tgtgtgatttaggcagatctctggccct--ct--------tgtg-----ccctta i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 247587 239 + 80904711 AGCAAGCAACCAACCAACCGAGCCACCAGGAAGTCGTGCACAACTGGGCCAGGGGCTGAGAGGACAC-AGAA---GTGTAGCACACACTCCCTGGACTGAAAAACA---CACCTTCCTGGACAAACAGCAAATCCTACCATCTAAAAacagccttgggagtcagacagacttgagttccagcctccgccttgcccacctctatgc---tgtgtgatttaggcaggtctctggccct--ctc-------tgtg-----tcctca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 255644 239 + 80997621 agcaagcaaccaaccaaccgagccaccaGGAAGTCGTGCACACCTGGGCCAGGGGCTGAGAGGACAC-AGAA---GTGTAGCACACACTCCCTGGACTGAAAAACA---CACCTTCCTGGACAAACAGCAAATCCTACCATCTAAAAacagccttgggagtcagacagacttgagttccagcctccgccttgcccacctctatgc---tgtgtgatttaggcaggtctctggccct--ctc-------tgtg-----tcctca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 236030 239 + 74645514 AGCAAGCAACCAACCAACCGAACCACCAGGAAGTCCTGCACACCTGGGCCAGGGGCTGAGAGGACAC-GGAA---GTGTAGCACACACTCCCTGGACTGAAAAACA---CACCTTCCTGGACAAACAGCAAATCCTACCATCTAAAAACAGCCTTGGGAGTCAGACAGATTTGAGTTCCAGCCTCCGCCTTGCCCACCTCTATGC---TGTGTGATTTAGGCAGGTCTCTGGCCCT--CTC-------TGTG-----TCCTTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 223037 242 + 75148670 agcaagcaaccaaccaaccgagccaccaGGAAGTCATGCACACCCGGGCCAGGGGCTGAGAAGACAC-GGAA---GTGTAGCACACACTCCCTGGACTGAAAAACACACCACCTTCCTGGACAAACAGCAAATCCTAGCATCTAAAAacagccttgggagtcagacagacttgagttccagcctccgccttgcccacctctatgc---tgtgtgatttaggcaggtctctggccct--ctc-------tgtg-----tcctta i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1045631 235 - 1291538 AGCAACCAACCAACCACCCAAGCCACCAGGAAGTCCTGCACACCTGGGCCA-GGGCAGAGAAGGCAC-GGAAGATGTGTAACACACACTCCCCGGACTGAAAAATA---TGCCTTCCCGGACACACGGCAAATCCTAGCATCTAAAAacagccttgggagtcaggcacacttgagttccag------ccttgcccacctatatgc-----tgtgatttaggcagctctctggccctgagtt-------tgtg-----tcctca i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75964493 206 + 122082543 --------------------CACCACCAGCATGCCCTGCACACCAGGGCCAAATACTGAGGGGACGCTGGAG---ATGTGGGACAC-----------------ATA---CACCTTCA-GGGCAAACAACACATCTTTGTATGTAATGACAGctt--gcagcccg-caggactgaattcca-cctctggtctgcccacccgcacgcagctgtgtgagtcagacaggtccctggccct--ctc-------tgagcttgcttccca i mm10.chr11 C 0 I 1 s canFam3.chr9 15798827 225 - 61074082 ---AAGCAACCACCTGACCATGGCACCAGCACATCCCACACACCTGGGCCAGGTGCCAAGAGGACAT-AGAA---------------CTCCCTGGACTGAAGCACA---CGCTTCCCTG----AACAGCAAATGCTAgcaatgaaaaaagtcct--ggaatcagacagactcgagttccaacctttgccctgcccacccataagc---tgtgtgattcaggcaggtccctaacact--ctctgggttttgtg-----ttctca i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 213379 1446 + 73212453 I e panTro4.chr17 314612 1806 + 82630442 M a score=221616.000000 s hg38.chr17_GL383563v3_alt 356439 143 + 375691 tgaacagaatgaggacaataatcctaatgcttacccctctggatgtttctaaga--taaaggaaaacgagggacta-----cc-tggaatgattagcacactg-cccggcacgggacaacccactcaacaaacagCTGCAATGATTAAGAGC s nomLeu3.chr19 320277 143 - 81552678 tgaacagaatgaggataataatcctaaagcttacccctctggatgtttctagga--taaaggaaaacgagggacta-----cc-tggaatgatcagcacactg-cccggcaagggacaacccactcaacaaacagCTGCAATGATTAAGAGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 247826 143 + 80904711 taaacagaatgaggacaataatcctaatgcttacccctctggatgtctctagga--taaaggaaaatgagggacta-----cc-tggaatgattagcacactg-cccggcacaggacaacccactcgacaaacagCTGCAGTGATTAAGAGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 255883 143 + 80997621 taaacagaatgaggacaataatcctaatgcttacccctctggatgtctctagga--taaaggaaaacgagggacta-----cc-tggaatgattagcacactg-cccggcacaggacaacccactcgacaaacagCTGCAGTGATTAAGAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 236269 143 + 74645514 TAAACAGAATGAGGACAATAATCCTAATGCTTACCCCTCTGGATGTCTCTAGGA--TAAAGGAAAACGAGAGACTA-----CC-TGGAATGATTAGCACACTG-CCCGGCACAGGACAACCCACTCGACAAACAGCTGCAGTGATTAAGAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 223279 143 + 75148670 taaacagaatgaggacaataatcctaatgcttacccctctggatgtctctagga--caaaggaaaaccagggacta-----cc-tggaatgatgagcacactg-cccggcacaGGACAGCCCACTGGACAAACAGCTGCAGTGATTAAGAGC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75964700 105 + 122082543 tgggcagagtggagacaataatcttgatgtttgcctctctgagtGCTTCAAGAACCTAAAAGCCAGTGAAGGCCTGAGCCCCT-TGGA-----------ACTG-CCCAACTCAGGACA---------------------------------- i mm10.chr11 I 1 C 0 s canFam3.chr9 15799052 142 - 61074082 cgggcagaac-aagacaataactgcagcacccacccatctcggcaccaggagga--taacccaca-caagggaatg-----ccttggaaagatcagcatgctgcccccactcaaaatga-ccactcaataaacagctgctatgattAAGAGC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1045866 0 - 1291538 C e ponAbe2.chr17 213379 1446 + 73212453 I e panTro4.chr17 314612 1806 + 82630442 M a score=253082.000000 s hg38.chr17_GL383563v3_alt 356582 138 + 375691 TGGAAAAGTATATCTCGCACTCATGATACAGTGGGAGGCTAATAGCAGAGAACAAAATAC----TAAACC--GTGTGGGACAACCTGCAACGGATCCATCAACAAGCCCAGCAGGAACGCAGATGGA-------CTGGACGAACGGAACCG s nomLeu3.chr19 320420 138 - 81552678 TGGAAAAGTATATCTCGCACTCATGATATAATGGGAGGCTAATAGCAGAGAACAAAGTAC----TAAACT--GTGCGGCACAACCTGCAACCGATTCATCAACAAGCCCGGCAGGAACGCAGAGGGA-------CCGGAAGAACAGAACCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 247969 138 + 80904711 TGGAAAAGTGTATCTCGCACTCATGATATAATAGGAGGCTAATAGCAGAGAACAAAGTAC----TAAACT--GTGTGGCACAACCTGCAACTGATCCTTCAACAAGCCCAGCAGGAACGCAGAGGGA-------CTGGAAGAAGGGAACCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 256026 138 + 80997621 TGGAAAAGTGTATCTCGCACTCATGATATAATAGGAGGCTAATAGCAGAGAACAAAGTAC----TAAACT--GTGTGGCACAACCTGCAACTGATCCTTCAACAAGCCCAGCAGGAACGCAGAGGGA-------CTGGAAGAAGGGAACCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 236412 138 + 74645514 TGGAAAAGCGTATCTCGCACTCATGATATAATAGGAGGCTAATAGCAGAGATCAAAGTAC----TAAACT--GTGTGGCACAACCTGCAACTGATCCTTCAACAAGCCCAGCAGGAACGCAGAGGGA-------CTGGAAGAAGGGAACCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 223422 138 + 75148670 TGGAAAAGTGTATCTCGCACTCATGATATAATGGGAGGCTAACAGCAGAGAACAAAGTAC----TAAACT--GTGTGGCACAACCTGCAACTGATCCTTCCACAAGCCCAGCGGGAACACAGAGGGA-------CTGGAAGAAGGGAACCG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1045866 133 - 1291538 tggaaaagtgtatatcgcactcaggataccaccggaggctaacagcagagaataaagtgctttataaagt--gtgtggcac--------acggatccatcaataCG-CAGGCAGAAGCGCAGACAGG-------CCGGAAGAACAGAACGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75964805 102 + 122082543 CGGAA--------CGCCCACTCTTGGT----TAAGAAGGCAACAGCAGAGAA-----TGT----TCAGCTTGGCATAGAACACGATGTAACCAAGCCATTCAGAGATCTAGTTTGAGCA-----GGG-------C---------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15799194 144 - 61074082 TGGAAAAGCATCGCTCATACCCATGATACACCCGGAGGCTAATGGCAGAGAACAAAGTAT----TAAATT--GGGTGGCACACACTGTAATGAATCCATCAATAA-CCCAGCAGGAGTGTAGATAGATGGGAATCTGGAAGACTGGATCAG i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 213379 1446 + 73212453 I e panTro4.chr17 314612 1806 + 82630442 M a score=952873.000000 s hg38.chr17_GL383563v3_alt 356720 472 + 375691 TCCAGGAGGGAGGTGGTGCTTGAACTGAACTCTCAATTGTATTAAGGATGCTGGGGAGGTGTTCTTGGAGGCCTGAG-GGTGGGAATGCCTCCATTGAGTGCTTG-------------------------------------------------------CAGGGCGCCCAGTCCTGGAGAG----CCAGAGAGAAGGGGAACAAGCTTCCCGCTGCCATCAGGGACAGAAGGGGATGTGAGATCAGC---CGACAGCTGCAGCTGGTGGCCTGAGGGCATCGTG----GAGTGGGAAGGGTCCCCGGTGCAGCCAGGGAGGTGAGCAAAGCCAGGGAAGGG-TCCCCGGTGCAG-------CCAGGGAGGTGAG---CAAAGCTTTTCCAAGGAAACTGCACCTGAGCCAAGTCCCAGAGGGTAGGGGCGAGAGGGCCCAACCAGGGGCAGGAGGCAAGAAGCTTCAGGATTGGAAATTAGTTTGAGAGAATGAGGCCACGTGACTGAGG-GCCTTCAAATGCAGGCAGGGGAG--CTGAGCTT----TGCCCAGG s ponAbe2.chr17 214825 491 + 73212453 TCCGGGAGGGAGGCGGTGCT-GAACTGAACTCTCAACTGTATTAAGGATGCCGGGGAGGTGTGCTTGGAGGTCTGAG-GGTGGGAATGCCTCTATTGAGCGCTTGCAGGGCACCCAGTCCTGGAAGGTCTGAGGGTGGGAATGCCTCTATTGAGCGCTCACAGGGCACCCAGTCCTGGAGAG----CCAGAGAGAAGGAGAACAAGCTTCCCGCTGCCATCAGGGACAGAAGGGGATGTGAGATCAGC---CGACAGCTGCAGCTGGTGGCCTGAGGGCATTGTG----GAGTGGGAAG--------------------------------CCAGGGAAGGG-TCCC-GGTGCAG-------CCAGGGAGGTGAG---CGAAGCTTTTCCAAGGAAGCTGCACCTGAGCCAAGTCCCAGAGGGT-GGGGTGAGAGGGCCCAACCAGGG-CAGGAGGGAAGAAGCTGCAGGATTGGAAATTGGTTTGAGAGAATGAGGCCACGTGACTGAGG-GCCTTCAAATGCGGGCAGGGGAG--CTGAGCTT----TGCCCAGG i ponAbe2.chr17 I 1446 C 0 s nomLeu3.chr19 320558 439 - 81552678 TCCGGGAGAGAGGTGGTGCTTGAACTGAACTCTCAATTGTATTACGGATGCCGGGGAGGTGTTTTTGGAGGTCTGAG-GCTAGGAATGCCTCTATCGAGTGCTTG-------------------------------------------------------CAGGGCGCCCAGTCCTGGAGAG----CCAGAGAGAATGGGAACAAGCTTCCCGCTGCCATCAGGGACAGAAGGGGATGTGAGATCAGC---CGACAGCTGCAGCTGGTGGCCCGAGGGTGTCGTG----GAGTGTGAAA--------------------------------CCAGGGAAGGG-TCCT-GTTGCAC-------CCAGGGAGGTGAG---CAAAGCTTTTCCAAGGAAATTGCACCTGAGCCAAGTCCCAGAGGGTAGGGGCGAGAGGGCCCAACCAGGGGCAGGAGGGAAGAAGCTGCAGGATTGGAAATTGGTTTCAGAGAATGAGGCCACGTGACTGAGG-GCCTTCAAATGCGGGCAGGGGAG--CTGAGCTT----TGCCCGGG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 248107 427 + 80904711 TCCGGGAGGGAGGTGGTGCTTGAACTGAACTCTAAA---------GGATGCTGGGGAGATGTTCTTGAAGGTCTGAG-GGTGGGAATGCCTCCATTGAGTGCTTA-------------------------------------------------------CAGGGCGCACAGTCCTGGAGAG----CCAGAGAGAAGGGAAACAAGCTTCCCGCTGCCATCAGGGACAG-AGGGGATGTGAGATCAGC---CCACAGCTGCAGCTGGTGGCCTGAGGGCGTTGTG----GAGTGGGAAG--------------------------------CCAGGAAACGG-TCCC-AGCGCAG--------CAAGGAGGTGAG---CAAACCTTTTCCAAGGAAACCGCACCTGAGCCAAGTCCCAGAGGGTAGGGGCAAG-GGGCTCAAGCAGTGGCGGGAGGGAAGAAGCTGCAGGATTGGAAACTGATTTGCGAGAATGAGGCCAGGTGACTGAGG-GCCTTCAAATCCAGGCAGGGGAG--CTGAGCCT----TGCCTGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 256164 427 + 80997621 TCCGGGAGGGAGGTGGTGCTTGAACTGAACTCTAAA---------GGATGCTGGGGAGGTGATCTTGAAGGTCTGAG-GGTGGGAATGCCTCCATTGAGTGCTTA-------------------------------------------------------CAGGGCGCCCAGTCCTGGAGAG----CCAGAGAGCAGGGAAACAAGCTTCCCGCAGCCATCAGGGACAG-AGGGGATGTGAGATCAGC---CCACAGCTGCAGCTGGTGGCCTGAGGGCGTTGTG----GAGTGGGAAG--------------------------------CCAGGAAAGGG-TCCC-AGCGCAG--------CAAGGAGGTGAG---CAAACCTTTTCCAAGGAAACCGCACCTGAGCCAAGTCCCAGAGGGTAGGGGCAAG-GGGCTCAAGCAGTGGCGGGAGGGAAGAAGCTGCAGGATTGGAAACTGGTTTGCGAGAATGAGGCCAGGTGACTGAGG-GCCTTCAAATCCAGGCAGGGGAG--CTGAGCCT----TGCCTGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 236550 422 + 74645514 TCCGGGAGGGAGGTGGTGCTTGAACTGAACTCTAAA---------GGATGCTGGGGAGGTGTTCTTGGAGGTCTGAG-GGTGGGAATGCCTCTATTGAGTGCTTA-------------------------------------------------------CAGGGCGCCCAGTCCTGGAGAG----CCAGAGAGAAGGGGAACAAGCTTCCCGCTGCCATCAGGGACAGAAGAGGATGTGAGATCAGC---CCA------CAGCTGGTGGCCTGAGGGCGTTGTG----GAGTGGGAAG--------------------------------CCAGGAAAGGG-TCCC-AGCGCAG--------CAAGGAGGTGAG---CAAACCTTTTCCAAGGAAACCGCACCTGAGCCAAGTCCCAGAGGGTAGGGGCAAG-GGGCTCAAGCAGTGGCGGGAAGGAAGAAGCTGCAGGATTGGAAACTGGTTTGCGAGAATGAGGCCAGGTGACTGAGG-GCCTTCAAATCCAGGCAGGGGAG--CTGAGCCT----TGCCTGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 223560 431 + 75148670 -CCGGGAGGGAGGTGGTGCTGGAACTGAACTCTAAA---------GGGTGCTGGGGAGGTGTTC-TGAAGGTCTGAG-GGTGGGAATGCCTCTATTGAGTGCTTA-------------------------------------------------------CAGGGCGCCCAGTCCTGGAGAG----CCAGAGAGAAGGGGAACAAGCTTCCCGCGGCCATCAGGGACAGAAGGGGATGTGAGATCAGC---CGACAGCTGCAGCTGGTGGCCTGAGGGCGTTGTGGAGTGAGTGGGAAG--------------------------------CCAGGAAAGGG-TCCC-AGTGCAG--------CAAGGAGGTGAG---CAAACCTTTTCCAAGGAAACCGCACCTGAGCCAAGTCCCAGAGGGTAGGGGCAAGAGGGCTCAGCCGGTGGCGGGAGGGAAGAAGCTGCAGGATTAGAAACTGGTTTGCGAGAATGAGGCCAGGTGACTGAGG-GCCTTCAAATCCAGGCAGGGGAG--CTGAGCTT----TGCCTGGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1045999 426 - 1291538 TCCAGGAGGGAG--GGCTTCTTAACTGCACTCTGAA---------GCACGCCCGAGAGGCGTTCTGGGAGGTCTGCG-GGTGGGAACGGCTTTATCCAGCGCGTA-------------------------------------------------------CAGGGTGCCCAGTCCCGGAGAT----CCAGGGAGAAGGGGAATAAGCTTCCCGCTGCTGTCCAGGACTTAAGGGGCTGTGAGGTCAGC---AGACAGCTGCAGCTGGT-GCCTGAGGGCA-CGCG----GAGGGCGCAG--------------------------------CCAGGAAAGGG-CCCC-AGTGCCG-------ACAGGGAGGTGAA---CAACGCGTTCCCAAGGAAACCACACCCGAGCCAAGTACCAGAGGGTAGAGGTGAGAGGGTCGAACCAGGGGCAGGAGGGAAGAAGGGGCAGGACTGGAAACTGCTTT--GAGAATGAGGCCCTGTGATTGAGG-GCCTTCAGATCCCGGCAGGGGAGCTCTGAGCTC----TGCCTGGG i calJac3.chrUn_GL286409 C 0 I 161 s mm10.chr11 75964907 350 + 122082543 TCCAGGCATGGGATGG-----------------------------GAA------------GTTCTCAGAAACTTGAG-GGCAG-------TTCACTGAACACCTC-------------------------------------------------------CAGGATGTGCAGTATGGGGGGGGGGTACTGAGAG------------------GCTGCCATCAGGCATAC------------CATCAGCA--TGACAGCTGTGGCTAA----------------------GGATGCAGAG--------------------------------TTAGGAAAGGGATCCT-GGATCAGTGGGATTCTAGGCAGGAGGA---TCAAGC-TTTCTTAGGCAACAGCACCTGAGCCAAGTAGTACAGGG-AGGGACAAGAGTGACTGACCCTGAGGGGGAAGAGAGAAGATTCAGGATTGGAAACCAGT----GTGAACATAGCCCGG-GACTGAAA-GGCCGAGAACCCA-GCAGAGGAG--CTGACCCCGAAAGGCCTG-- i mm10.chr11 C 0 C 0 s canFam3.chr9 15799338 390 - 61074082 CCGCAGTCAGAGGTGGAGTTTCAGCCAGACTTGGAA---------GGATAACAGGGAGGTATTCATGGATGTCCGGGCAGTGGGAATTCTTTTATGTAGTGCTTC-------------------------------------------------------CTGGGTGCCAGGTCCTGGGGAT----CCAG-GAGAAAGGGCACAA----------------AGGGTCAG-----------AGATCAGCAGCAGACAGCTGCA---------------------------CAAGGGAAAG--------------------------------CCAAGGAAACA-CACA-AACACAC---ATGTCCAGCCAGAGGAGTCACAAAGCTTTCCCAGGGCAACAGCGACTGAGCAGCATCTCAAAGGGTAAGGGCAGAAGGGCT-GACCCTAGTAGAGAGCGAAGATGCTACAGGACTGGAAACTGGTTTGGGAGACAGAGGCAACAGGAATGAGGAGCTTTCAGCTCTGGGCGGAAGAA--CTAGGCTC----TGTGTGGG i canFam3.chr9 C 0 C 0 e panTro4.chr17 314612 1806 + 82630442 M a score=169862.000000 s hg38.chr17_GL383563v3_alt 357192 88 + 375691 AGGACATATGGAGCCTCTGAAGATATCTCGGTGGGGCGGGGGTCGGTGACAGGGTGAAA--CGAACCATCATTCTAGAAGGGACATGCCG s ponAbe2.chr17 215316 90 + 73212453 AGGACATATGGAGCCTCTGAAGATATCTCGGTGGGGCAGGGGTCGGTGACAGGGTGAAAGTCGGACCATCATTCTAGAGGGGACATGCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 320997 88 - 81552678 AGGAAATATGGAGCCTCTGAAGATATCTCAGTGGGGTGGGGGTCGGTGACAGGGTGAAA--GGGACCATCATTCTAGAGGGGACATACCG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 248534 87 + 80904711 AGGACATA-GGAGCCTCTGAAGATATCTAGGTGGGGAGGGGGTCGGTGACAGGGTGAGA--GGGACCATCATTCTGGAGGTGACATGCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 256591 87 + 80997621 AGGACATA-GGAGCCTCTGAAGATATCTAGGTGGGGAGGGGGTCGGTGACAGGGTGAGA--GGGACCATCATTCTGGAGGTGACATGCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 236972 87 + 74645514 AGGACATA-GGAGCCTCTGAAGATATCTAGGTGGGGAGGGGGTCGGTGACAGGGTGAAA--GGGACCATCATTCTGGAGGTGACATGCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 223991 88 + 75148670 AGGACATATGGAGCCTCTGAAGACATCTAGGTGGGGAGGGGGTCGGTGACAGGGTGAAA--GGGACCATCATTCTGGAGGTGACATGCCG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75965257 79 + 122082543 AGGAAAACCGGAGACTCTAAGGATTTCT--------TAGGGGTCAATTATTTGGTCAA---GAGCTGCTCCTTCTAGAGGTGACATGTCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15799728 73 - 61074082 AGGAACCCCCAACCCTGTGAAGATTTCTCAG-GGGAGGAGGGTCG----------------GCAACCATAAGTCTACAGGTGACGTGGCA i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1046425 161 - 1291538 I e panTro4.chr17 314612 1806 + 82630442 M a score=419045.000000 s hg38.chr17_GL383563v3_alt 357280 228 + 375691 GATGGATTGCCACATGG--GGCTGGAGGGGGTTCCCACAGGAGAGAGAACAGCTAAGAGGCCT-CTGTACTCTGGACTGAGATGTTC-AAGGCCTGTAGGAAT----CCATCACAAAGGAGAGGG---GAGAGGCAGACACATTTTGGAGACCAGTGTAA-ATGACAGAGAATGAGGGAAACCCACCAGCGGGAAGTGAGTGAGGGCAGCTGC---CTG-----------GGAGGAGA------------CCAG--TC--GGGTGCGCTG s ponAbe2.chr17 215406 229 + 73212453 GATGGATTGCCGCATGG--GGCTGGAGGGGGTTCCCACAGGAGAGAGACCAGCTAAGAGGCCT-CTGTACTCTGGACTGAGATGTTC-AAGGCCTGTAGGAAT----TGATCACAAAGGAGAGGG---GAGAGGCAGACACATTTCGGAGACCAGTGTAA-ATGACAGAGAATGAGGGAAACCCACCAGCGGGAAGTGAGTGAGGGCAGCTGC---CTG-----------GGAGGAGGA---------GGCGAG--TC--GGGTGC--TG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 321085 231 - 81552678 GATGGACTGCCGCATGG--GGCTGGAGGGGGTTCCCACAGGAGAGAGACCAGCTAAGAGGCCT-CTGTGCTCTGGACTGAGATGTTC-TGGGCCTGTAGGAAT----TGATCACAAAGGAGAGGG---GAGAGACAGACACATTTCGGAGAACAGTGTAA-ATGACAGAGCATGAGGGAAACCCACCAGCGGGAAGTGAGTGAGGGCAGCTGC---CTG-----------GGAGGACGA---------GGCCAG--TC--AGGTGCGCTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 248621 227 + 80904711 G------------ATGG--GGCTGGAGGGGGTTGCCGCAGGAGACAGACCAGCTAAGAGGCCG-CTGTACTCTGGACTGAGGTGTTC-AAGTCCTGTAGGAAT----CGGTCACAAAGGAGAGGG---GAGAGGCAGACACA-TGCGGAGAGGAGTGTAA-ATGATAGAGAATGAGGGGAACCCACCAGCGGGAAGTGAGCGAGGGCAGCTGC---CTG-----------GGACGGGGAGCGGGAGGCGGCCAG--TC--GGGTGCGCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 256678 227 + 80997621 G------------ATGG--GGCTGGAGGGGGTTGCCGCAGGAGACAGACCAGCTAAGAGGCCG-CTGTACTCTGGACTGAGGTGTTC-AAGTCCTGTAGGAAT----CGGTCACAAAGGAGAGGG---GAGAGGCAGACACA-TTCGGAGAGGAGTGTAA-ATGATAGAGAATGAGGGGAACCCACCAGCGGGAAGTGAGCGAGGGCAGCTGC---CTG-----------GGACGGGGAGCGGGAGGCGGCCAG--TC--GGGTGCGCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 237059 227 + 74645514 G------------ATGG--GGCTGGAGGGGGTTGCCGCAGGAGACAGACCAGCTAAGAGGCCT-GTGTACTCTGGACTGACGTGTTC-AAGTCCTGTAGGAAT----CGGTCacaaaggagaggg---gagaggcagACACA-TTCGGAGAGGAGTGTAA-ATCATAGAGAATGAGGGAAACCCACCAGTGGGAAGCGAGTGAGGGCAGCGGC---CTG-----------GGAGGGGGAGCGGGAGGAGGCCAG--TC--GGGTGCGCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 224079 226 + 75148670 C------------GTGG--GGCTGGA-GGGGTTGCTGCAGGAGACAGACCAGCTAAGAGGCCG-CTGCACTTTGGACTGAGGTGTTC-AAGTCCTGTAGGAAT----CGGTCACAAAGGAGAGGG---GAGAGGCAGACACA-TTCGGAGAGGAGTGTAA-ATGCTAGAGAATGAGGGAAACCCACCAGCGATAAGTAAGCGAGGGCAGCTGC---CTG-----------GGAGGGGGAGCGGGAGGCGGCCAG--TG--GGGTGCGCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1046586 245 - 1291538 GGTGGCCTGCCGCATGGGCGGCTGGAGGGGATTCC--------------CAGCTAAGAGGCCTGTTGCACCCTGGACTGAGATGTTC-AAGGCCTGTAGGAAT----CAGTCACAAAGGAGAGGGGACGACAGGTGGGCACA-TTTCGGGACAAGTGTAG-ATGACAGG--ATGAGGGAAACGCACCGGCGGGAAGTGAGTGAGGGCAGCCGCGGGCTgggggaggaggaggaggaggaggaggaggaggCCTG--TCTTGGGTGCGCTG i calJac3.chrUn_GL286409 I 161 M 2224 s mm10.chr11 75965336 158 + 122082543 -------------------GATTGTA---TGCTGCAGCAGGAG-------------------T-CTG-ATTCTAGCCTACACTGTTC-CAGGTCAGGGCCAGC----CGGTTCCAGGGGGGAAAG-------GCCAGACCC--CTCAGAGGCAAATGTAGTCTGATAGA--ATGAG-------------------------AAGGGCTCCTGA---CTG-----------AGACACCCGTCCAGACTCAGACTA--TC------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15799801 205 - 61074082 ---AGTGGGCTGCA-GA--AGCTGGATAGGATTCTGGAATCAGGGAGACCAGCTGAAGGGCCT-CAGAACCCCA-CCTGAGATGTTCTAAGGCCTGCAGGGGTAGCCAGTTCACAGAGGGGCCAC---TAAAGGCAGAGAAA----------------AA-GT------------GGGAGCCCCACTGCTGAAGAGCAAGTGAGAGCTGCTGC---CTG-----------GGAGGAGGA---------ATCCGGGCTC--AGATGTGCCG i canFam3.chr9 C 0 C 0 e panTro4.chr17 314612 1806 + 82630442 M a score=202034.000000 s hg38.chr17_GL383563v3_alt 357508 103 + 375691 AGTTTGCGGTGACACCGTGGCACCC---AGAGAGCA-AGACAGGGTGGGCTGGAAGTCAGAGGGGGCA--TTCCCAGAGGACTCCTGGAGCCAGCCCCGTGAGAAGTAC s ponAbe2.chr17 215635 103 + 73212453 AGTTTGCGGTGACACCGGGGCACCC---AGAGAGCA-AGACAGGGTGGGCTGGAAGTCAGAGGGGGCA--TTCCCAGAGGACTCCTGGAGCCAGCTCCGTGAGAAGTAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 321316 103 - 81552678 AGTTTGCGGTGACACCGGGGCACCC---AGAGAGCA-AGACAGGGTGGGCTGGAAGTCAGACGGGGCA--TTCCCAGAGGACTCCTGGAGCCAGCCCCCTGATAAGCAC i nomLeu3.chr19 C 0 I 100 s rheMac3.chr16 248848 103 + 80904711 AGTTTTCGGTGACTCCGGGGCACCC---AGAGAGCA-AGACAGGATGGGCTGGAAGTCAGAGTGGCCA--TTCCCAGAGGACTCCCCGAGCCAGCCCCGTGAGAAGCAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 256905 103 + 80997621 AGTTTTCGGTGACACCGGGGCACCC---AGAGAGCA-AGACAGGATGGGCTGGAAGTCAGAGTGGCCA--TTCCCAGAGGACTCCCCGAGCCAGCCCCGTGAGAAGCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 237286 103 + 74645514 AGTTTTCGGTGACACGGGGGCACCC---AGAGAGCA-AGACAGGATGGGCTGGAAGTCAGAGTGGCCA--TTCCCAGAGGACTCCCCGAGCCAGCCCCGTGAGAAGCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 224305 103 + 75148670 AGTTTTCAGTGACACCGGGGCACCC---AGAGAGCA-AGGCAGGATGGGCTGGAAGTCAGAGTGGCCA--TTCCCAGAGGACTCCCCGAGCCAGCCCCGTGAGAAGCAC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75965494 86 + 122082543 ---TTTGAGTGACTACGGGGCACCCCAAAGAAAGCCTGGACAGGAGTAGCACGAGGT-AGTGTGA-------------------CCCAAGACCACTGCGTGAGAAGCCA i mm10.chr11 C 0 C 0 s canFam3.chr9 15800006 102 - 61074082 GGTTTGGGGTGTCACTGGGGCAGCC---AAGGAACC-AGGACTGAT--GCTAGAACCCAGAGGGGTGGGCTTTCCTGAGGGCTCCTGATGAAAGCTCC-TGTGAAGTTA i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1046831 2224 - 1291538 M e panTro4.chr17 314612 1806 + 82630442 M a score=35410.000000 s hg38.chr17_GL383563v3_alt 357611 29 + 375691 AACACAGGGCCTGGGAAAACAGTCCCAGG s ponAbe2.chr17 215738 29 + 73212453 AACACAGGGCCTGGGAAAACAGTCCCAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 248951 29 + 80904711 AACACAGGGTTTGGGAAAACAGTCCCAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 257008 29 + 80997621 AACACAGAGTTTGGGAAAACAGTCCCAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 237389 29 + 74645514 AACAAAGGGTTTAGGAAAACAGTCCCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 224408 29 + 75148670 AACACAGGGTTTGGGAAAACAGTCCCAGG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75965580 28 + 122082543 TAAACTGGGCCTA-GAAAGTAGAAGCAAG i mm10.chr11 C 0 I 1 s canFam3.chr9 15800108 28 - 61074082 AACACAGCCCCTCAAAATACATGCTGCT- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1046831 2224 - 1291538 M e nomLeu3.chr19 321419 100 - 81552678 I e panTro4.chr17 314612 1806 + 82630442 M a score=535414.000000 s hg38.chr17_GL383563v3_alt 357640 402 + 375691 AAAGAGG----GAAAAAGGCT--------------CAGCAAAGGAGAA-GGAACCAGGAGAGAGGCATG-CCCAGAAGTGACGGC--------GGGGAGGCTGCAAGCTGGACACCAGCGCGCAGGGGTC---CGCTTCCCGGGGAGAGCGACCGAGGCACCACAGAAGAGGCGTGTTTGGAAACAAAACGACTTTTGGGTTTAGAAGTTTCAGCAAAGTGGCCA------CCAGCAG-CCAGGCTGCAgag--gatggaggggggcggctggcgggga-gggggcggctgg-----aggggagggggCAGCAGGTGCCGAGCTCTTGTGGGAAAACGTGACAG----AGAAAAGAGGAAAC-AAGCTGACGGCTCCGATGCCGGGTTTTGTGTTTTTCAggagatgggagatgggaggccgaggggatgtcagagacgcggagtggggg---tgg s ponAbe2.chr17 215767 381 + 73212453 AGAGAAG----GAAAAAGGCT--------------CAGCAGAGGAGAA-GGAAGCAGGAAAGAGGCACG-CCCAGAAATGAGGGC--------GGGGAGGCTGCAAGCTGGACACCAGCGGGCAGGGGCC---CGCTTCCCGGGGAGAGCGACCGAGGCACCACAGGAGAGGCGTGTTTGGAAACGAAACGACTTTTGGGTTTAGAAGTTTCAGCGAAGTGGCCG------CCGGCAG-CCAGGCTGCAGAG--GAT-------------------GGA-GGGGGCGGCTGC-----GGGGGAGGGGGCAGCAGGTGCCGAGCTCTTGTGGGAAAACGTGACAG----AG--AAGAGGAAAC-AAGCTGACGGCTCAGATGCCGGCTTTTGTGTTTTTCAGGAGATGGGAGATGGGAGGCCGAGGGGATGTCAGATACGCGGGGTGGCGG---TGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 248980 382 + 80904711 AAAGGGG----GAAGAAGGCT--------------CAGCCAAGGAGAA-GGAACCAGGAGAGAGGCGTG-CCCAGAAACGACGGC--------GGGGAGGCTGCAAGCTGAACCCCAGCGCGCCAAGGTC---CGCTTCCACGGAAGAGCGACGGTGGCCCCACAGAAGAGGCGGCTTTGGAAACAAAATGACTTTTGGGTTCAGCAGTTTCAGCGCAGTGGCCG-------CGGCAG-CCAGACTGCAGAG--GAT-------------------GGAGGGGGGCAGCTGG-----GTGAGGGAGTG-AGCAGGTGCCGAGCTCTTGTGGGAAAATGTGACAG----AGAAAAGACAAAAC-AAGCTGAAGGCTCAGATGCTGGGTTTTGTGTTTTTCAGGAGATGGGAGTTGGGAGGCCGAGGGGATGTCAGAGGCACGGGGCGGGGGTGG--- i rheMac3.chr16 C 0 M 1207 s macFas5.chr16 257037 379 + 80997621 AAAGGGG----GAAGAAGGCT--------------CAGCCAAGGAGAA-GGAACCAGGAGAGAGGCGTG-CCCAGAAACGACGGC--------GGGGAGGCTGCAAGCTGAACCCCAGCGCGCCAAGGTC---CGCTTCCACGGAAGAGCGACGGTGGCCCCACAGAAGAGGCGGCTTTGGAAACAAAATGACTTTTGGGTTCAGCAGTTTCAGCGCAGTGGCCT-------CGGCAG-CTAGGCTGCAGAG--GAT-------------------GGAGGGGGGCAGCTGG-----GTGAGGGAGTG-AGCAGGTGCCGAGCTCTTGTGGGAAAATGTGACAG----AGAAAAGACAAAAC-AAGCTGAAGGCTCAGATGCTGGGTTTTGTGTTTTTCAGGAGATGGGAGTTGGGAGGCCGAGGGGATGTCAGAGGCACggggcggggg------ i macFas5.chr16 C 0 C 0 s papAnu2.chr16 237418 379 + 74645514 AAAGGGG----GAAGAAGGCT--------------CAGCAAAGGAGAA-GGAACCAGGAGAGAGGTGTG-CCCAGAAACGACGGC--------GGGGAGGCTGCAAGCTGAACCCCAGCGTGCCAAGGTC---CGCTTCCACGGAAGAGCGACGGTGGCCCCACAGAAGAGGCGGGTTTGGAAACAAAATGACTTTTGGGTTCAGCAGTTTCAGTGCGGTGGCCG------CCGGCAG-CCAAGCTGCAGAG--GAT-------------------GGA-GGGGGCAGCTGG-----GTGAGGGAGCG-AGCAGGTGCGGAGCTCTTGTGGGAAAATGTGatag----agaaaagacaaaac-aagctgaaggctcagatgctgggttttgtgtttttcaggAGATGGgagttgggaggccgaggggatgTCAGAGGcatggggcggggg------ i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 224437 376 + 75148670 AAA-GTG----GAAGAAGGCT--------------CAGCCAAGGAGAA-GGAACCAGGAGAGAGGCGTG-CCCAGAAACGACGGC--------GGGGAGGCTGCAAGCTGAACCCCAGCGCGCCAAGGTC---CGCTTCCACGGAAGAGCGACGGTGGCCCCACAGAAGAGGGGGCTTTGGAAACAAAATGACTTTTGGGTTCAGCAGTTTCAGCGCAGTGGCCG-------CGGCAG-CCAGGCTGCGGAG--GAT-------------------GGA--GGGGCAGCTGG-----GTGAGGGAGGG-AGCAGGTGCCGAGCTCTTGTGGGAAAATGTGACAG----AGAAAAGACAAAAC-AAGCTGAAGGCTCAGACGCTGGGTTTTGTGTTTTTCAGGAGATGGGAGTTGGGAGGCCGAGGGGATGTCAGAGGCAcggggcggggg------ i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1049076 303 - 1291538 AGAGAGG----GAGGAAGGCC--------------CAGCAC---AGAA-GGATCCCGGAGAG------G-CCCGGGAACCATGGC---------GGGAGGCTGCGGGCTGGACCCCGG---GCCGGGGCCTCTTCCTTCCCGGTGAGAGC-----------------------GTGTCTGGAAACAAAATGACTTTCGGGCCGAGCGGTTTCGGGGAAGTGGCCG------CCGG----------TGCAGAG--GAC-------------------GGA---GGGCGGCCCG-----GAGGCGGC----AGCAGGGGCTGCGCTCTT-CGGGAAAATGTGACGG----AGAAGAGAGG-----AAGCTGGCGGCTCAGACGCGCCGTTTTGC-TTTTTCA--------------GGAGGCCACGTGGAGGACAAAGGCGCG--------------- i calJac3.chrUn_GL286409 M 2224 C 0 s mm10.chr11 75965609 342 + 122082543 AAAGAGGGGCTGAGAAAGGAA--------------CAACTGGGGAAGA-ACAAAAGGGAGGGAGGCCTG-GCTAGAAATAAAGACCACCGGTAGGGAAGGCTGCAAAATAGACGTCCCCCTCCCCAGAAC---TCCCCCTCCGCGATGGGTAGGGAGTGGGTATAGGAGGGAG------CGAGAGAGGCTCACTGGAAAGCCAGTTAGCCTCTGCTGAGTGGCAG-----GACAGCAGTCTGGGCTGCAGGGTTAAG-------------------GAA-GAGGACAGC--------------------AGCAGGTGCAGAGCACTTGTGGG-AAATGTGGCGG----TGAGCA---------AAGCTTACAGATCACCT-CATGTTCCTGCTTTTTTCA----------GTTGGGA-GCCAAGTGGCCCTCGGAGGC------------------ i mm10.chr11 I 1 C 0 s canFam3.chr9 15800136 394 - 61074082 AAAGTGG----GAAGAGGGGTGCAAAGAGAAAGAACAATAGAGAAGAACAAAGCCAGGAGAGTGAGGTGCCCCAGAAATCACAGC----------AAAGGCTGCAGAGAAGGCCGGAGCACACAGGGGGC---CACTACCCAGGCAGAAGGATGAGG--CCAGCCAGAGAGGAATGTTTGGAAACAAGATGACTTTCAAG-AAAGCAGTTTCAGCCAAGTGGTAGGGCCAGGCTGCGC-CAAAGCTGCGGAG--GAT-------------------TAAGAGGGGAGGCGTGGAGCCGAGAGGGAGGC-AGCAGGTGC--AGCACTTGTCTGAAAATGTGACAGTGAAAGAAAAGAGGAAATGAAGCCTTGGCCTCCCATGCATGATTTTT--TCCCCCA-------AGAGGTGGGAGACCAAGTGGATGTTACAGGAAGGAGGACGG-------- i canFam3.chr9 C 0 C 0 e nomLeu3.chr19 321419 100 - 81552678 I e panTro4.chr17 314612 1806 + 82630442 M a score=121951.000000 s hg38.chr17_GL383563v3_alt 358042 195 + 375691 ggctgggggctggagg---cggcccggggcgcgatctcccccggtgtcgg-gcggggcggggcggggacgggACTGCAGTCCTGGCTCTA-----CCCA---------CGCGCCCACCAGGGTCTGCAGGGGCG----------TCCCCAGGGCTCCCCCTG--CCCTCAGGCTGCCGGGAGGGTCAAAG-GTGCGCGCTGCACAGATGTAGGGTGACAGTGACCA s ponAbe2.chr17 216148 202 + 73212453 GGGTGCGGGCTGGAGG---CGGCCC-GGGCGCGATCTCCCCCGGTGTC------GGGCGGGGCGGGGACGGGACTGCAGGCCTGGCTCTACCCCCCCCC---------CGCGCCCACCAGGGTCTGCAGgggcgtccccagggctccccagggctccccCTG--CCCTCAG--TGCCGGGAGGGTCAAAG-GTGCGCGCCGCACAGACGCAGGGTGACAATGACCA i ponAbe2.chr17 C 0 M 1384 s macFas5.chr16 257416 161 + 80997621 ---tgggggctggagg---cggccc-ggatgcggtctcccccggtgt------ggggcggggcggggacgggACAGCAGGCCTCAGTCTA-----CCCA---------CGCGCCCACCAGGGTCTGCAGGGGCG----------TCCCCAGGGCTCCCCCTG--CCCTCAG--------------------------GCTGCACAGACGCAGGGTGACAGTGACCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 237797 166 + 74645514 ---tgggggctggagg---cggccc-gggtgcggtctcccccggtgtggg-gcggggcggggcggggacgggACAGCAGGCCTCAGTCTA-----CCCA---------CGCGCCCACCAGAGTCTGCAGGGGCG----------TCCCCAGGGCTCCCCCTG--CCCTCAG--------------------------GCTGCACAGACGCAGGGTGACAGTGACCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 224813 160 + 75148670 ---tgggggctggagg---cggccc-gggtgcggtctccccgggtgt------ggggcggggcggggacgggACAGCAGGCCTCAGTCTA-----CCCA---------CGCGCCCACCAGGGTCTGCAGGGGCG----------TCCCCAGGGCTCCCCCTG--CCCTCAG--------------------------ACTGCACAGACGCA-GGTGACAGTGACCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1049379 152 - 1291538 -------GGCTGG-------------GGGCGCGACCTCGGCGGGTGC------GGGGCAGG--GACGACGGGGCTGCAGG--GGGCTCTG-----CCC----------CGCGC-------------CAGGGGCC----------TCCCCA-GACTCCCCTCGACCCTTCAGGCTCCCTGGAGGATCCCAG-GCTCCTGC-GCACAGACGCT-GGTGACC-CGACA- i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75965951 181 + 122082543 -----AGCGATGGA------------AGGAGCAATCTCTTAGGGTG-------GGGGCGAGACAGAGCCTGAACTATAGGGGCCGGCTTC-----TCCAAGAGGCTTTCGCCTTGCTCTGGGGCCTCAGGAATG----------CCCCTT-TCCCTCCCCTG--CCCTCTG-CTGCCCCGAGGATCAAAGCTTGCCGGCTGCACA-ACCCG-ACTGACAGCTACTT i mm10.chr11 C 0 C 0 s canFam3.chr9 15800530 192 - 61074082 ----GGGGTATGGAAACCCCAGTAA-GGGCATATTCTCTCAAGGGGGAGGAGAGGGAAGGGGCAGAGACCAGGCTGCAGCCCTGGCTCTG-----CCAG---------TGCTGTTACCAGGGTGCCCAGGGCCA----------CCACCCAGACTCCTCCAG--CCCCCAG-CTGCTAGAAAGATCAAAA-GTGCTCATGGAGCA-GTGCAAGTGGAACCTGATCA i canFam3.chr9 C 0 C 0 e rheMac3.chr16 249362 1207 + 80904711 M e nomLeu3.chr19 321419 100 - 81552678 I e panTro4.chr17 314612 1806 + 82630442 M a score=112916.000000 s hg38.chr17_GL383563v3_alt 358237 198 + 375691 TTCCCCGGAATCTCCGTGGCTCTGA--TCTCCCCGGGGACGGGTCTCCACCTGCAGCAA----GACGCCTCCCCGCAGGACGACCCCCAAGGTGTTACGG-------------ACCCAGGCGA-CCCTGGGGTCGCTCTGCCCT-CTGAGCAGCCGGGCAGGAGGCAC--AAGCCCCAGCGCCCCCGGCAGAGGCCTCCGTGCGGCGCAGGAAAGGAA-------------------AGG s macFas5.chr16 257577 186 + 80997621 TTCCCCGGAATCTCCAAGGCTCTGATCTCTCCCCGGGGGC-AGTTTCCACCTGCAGCAG----GACGCCTCCCCACAGGGCGACCCCCGGGGATTTACGG-------------ACCCAGGCGG----------------ACCCT-CTGAGCAGCCGGGCAGGAGGCACAAAAGCCCCAGACCCCCCGGCAGAGGCCTCCCTGCAGCGCAGGAAAGGCA-------------------AGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 237963 184 + 74645514 TTCCCCGGAATCTCCAAGGCTCTGATCTCTCCCCGGGGAC-AGTTTCCACCTGCAGCAG----GACACCTCCCCGCAGGGCGACCCCCGGGGATTTATGG-------------ACCCAGGCGG----------------ACCCT-CTGAGCAGCCGGGCAGGAGGCAC--AAGCCCCAGAACCCCCGGCAGAGGCCTCCCTGCAGCGCAGGAAAGGAA-------------------AGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 224973 182 + 75148670 TTCCCCGGAATCTCCATGGCTCTGATCTCTCCCCGGGGAC---TTTCCACCTGCAGCAG----GACGCCTCCCCGCAGGGCGACCCCCGGGGTGTTACGG-------------ACACAGGCGG----------------ACCCT-CTGAGCAGCCGGGCAGGAGGCAC--AAGCCCCAGATCCCCCGGCAGAGGCCTCTCTGCAGTGCGGGAAAGGAA-------------------AGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1049531 166 - 1291538 TTCCCTGGAATCTCCATCGC-------TCTCGCCG----C-------------------------CCCCTCCCTACAGGACAAGCCCCGGGGTGTCAGGA-----------CCACCCGGTGGA-CCCTCAGGCCGCTCCGCCCT-CAGAGCAGCGGGGCAGGAGCC----AAACTCTAAA--CGCCGGCAGGGTCTTCTCCTCAGCGCgggaagggaa-------------------gag i calJac3.chrUn_GL286409 C 0 M 1753 s mm10.chr11 75966132 182 + 122082543 TTCCCCTGGACCCCACTGGCTCAAG--TCTCACTGAGATCCGGTTTCCACTTTCAGCATCCCCCAACCTTTCCCCCAAGGGAACCGCTAAGGTTTATCAG-----------ACACACAGGTGGAAAATCAGGTCGCTTTGCCCTGCTCCACCTCGG--------------AATTCGCAGA----CGGCCGGAGACCCCTG---GGAGCAGGCAGGG------------------------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15800722 232 - 61074082 TTCACCAGAACCCCCCTGGCCCTGA--TCTCACTGAGGATGGGTTTCCACCTTCTGCAT----CACACCTCTCCCTAGAACGACGTCGGGGGAGGGGGGGGCGGGTACAGACCACCCAGACCGGAAAATCGGGTGCTCAGCTTT-CCCAGCAGCCAGGCAGCAGACAAA-AAACCTCAGAACTCCGGGCAGAGCCGTCGCTAAAGCTCAAGAAATGGGGCTTCTGCCCCAACCACGCAGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 249362 1207 + 80904711 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M e panTro4.chr17 314612 1806 + 82630442 M a score=44577.000000 s hg38.chr17_GL383563v3_alt 358435 133 + 375691 CGGCT----------CCACGGCGGGCCCAGAGCCGTCGTCCCG--AGCAGT--GAGGCGCCTGGGACGGATGGAAGCGCTTCCCCGACGCCTCC-----------------GCCCGACTCCGGGAAGCGGCTTT--GGGAGGGCTGGAAGCCAACCCC--GCGGGACT-- s macFas5.chr16 257763 115 + 80997621 CG---------------------------GTGCCGGCGCCCGG--GGCAGT--GAGGCGCCC-GGACGGATGGAAGCGCCTCCCCGACGCCTCC-----------------GCCCGACGCCGGGAAGCGGCTTT--GGGAGGGCTGCAAGCCGACCTC--GCGGGCCT-- i macFas5.chr16 C 0 M 10545 s papAnu2.chr16 238147 105 + 74645514 CG---------------------------GTGCCGGCGCCCGG--GGCAGT--GAGGCGCCC-GGACGGATGGAAGCGCCTCCCCGACGCCT---------------------------CCGGGAAGCGGCTTT--GGCAGGGCTGGAAGCCGACCTC--GCGGGCCT-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 225155 115 + 75148670 CG---------------------------CAGCCGGCGCCCGG--GACAGT--GAGGCGCCC-GGACGGATGGAAGCGCCTCCCCGACGCCTCC-----------------GCCCGGCTCCGGGAAGCGGCTTT--GGGAGGGCTGGAAGCCGACCTC--GCGGGCCT-- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75966314 96 + 122082543 ----------------------------AGGGTCGCCATCCTG--AGCTCTCGGCGGCGCCCCGAGTGGATTGAAACACTTCCCCAAAGCT--------------------GTCTGGCCGCGGGGAGGGGTCTT--CCAGGGGCAGAA---------------------- i mm10.chr11 C 0 C 0 s canFam3.chr9 15800954 163 - 61074082 ----TGTCTTAGGTACCACTATGAGCCCACAGCCTTCACCCTGAAAGCAAT--GAGGCACCT-AGATGGATTTCAACCTTCCTCCGAGCCTTCTGCCCAGGAAGAAGGTGGGCCTGAGAGCTGGGAGTGGGTTTCCGGGGGGGCTCGAAAACACACCAGGGCAGGACTCT i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M e panTro4.chr17 314612 1806 + 82630442 M a score=53020.000000 s hg38.chr17_GL383563v3_alt 358568 255 + 375691 CAGGCTGGAAGGGATGGGCGGGGCGAG-TGGAGGCGTCGTCGGTCTCGGCTGTGAGAAGGGCCCCCCAAATCCTGCACGCACGACCCCCCTTCCGACCACCCAGCCGCGGGCG--------AAAGC-------------CCAAGTGTGCAGGGCCCGGGGCCCCCACGGGGGC---CC----CCAGTCTCGTGGGGCGTCGGGTC---CACGCCGCAGGCGAGGCCAGGTGCAGA------GGGGCGGCAGCCTGG-----ACCC-CCGGGCCCCTCC--CCGCACGTGCGCGCCGGGGCG s papAnu2.chr16 238252 246 + 74645514 CAGGCTGGGAGGGGCGGGCGGGGCGAG-TGGAGG---CGTCGGTCCCGGCCGTGAGAAGG-ACCCCCCAATCCCCCACGCGCGCCCCGCCTTCCGACCACCCAGCCACGGGCG--------AAAGC-------------CCGACTGTGCAGGGCCCAGGGCCCCCGT-GGCGC---CC----CCAGTCTCGTGCGACGTCGGGTC---CCCGCCCCAGGCGAGG-CAGGTGCAGA------GGGGCGGCAGCCTGG-----ACC----GGGCCCCTCC--CCGCACGTGCGCGCCGGGGCG i papAnu2.chr16 C 0 M 136 s chlSab2.chr16 225270 248 + 75148670 CAGGCTGGGAGGGGCGGGCGGGGCGCG-TGGAGG---CGTCGGTCTCGGCCGTGAGAAGGAACCCCCCAATCCCCCACGCGCGCCCCGCCTTCCGACCACCCAGCTACGGCCG--------AAAGC-------------CCCACTGTGCAGGGCCCAGGGCCCCCGT-GGCGC---CC----CCAATCTCGTGGGACGTCGGGTC---CCCGCCCCAGGCGAGG-CAGGTGCAGA-------GGGCGGCAGCCTGG-----ACC--CGGGGCCCCTCC--CCGCACGTGCGCGCCGGGGCG i chlSab2.chr16 C 0 C 0 s mm10.chr11 75966410 249 + 122082543 CCGGCTG-----------------ACT-CGGAGG-----ACACCCTCCACCCTGCACCTGCACACCCAAGGGCTCCACGTG--------CTTTCGAGTTCCCACTCCTGAACG--------CCAGCCAGTCCTTTTGAGCCGAGCGCCCAAGGCCAAGGACACCCCA-CACACAAACG----CCAGAAACCGAAAACATTGGATCCTGCCCACCCTACCCCGGC-CGGACACTGAGGGACCGGGACGGGACGCTGGCCACCACCT-GCAGGCCCCTCCCGCCGCCCGCGCGCGCT------ i mm10.chr11 C 0 C 0 s canFam3.chr9 15801117 238 - 61074082 CAGACTCAAAGAGGTGGGCAGAGCGAACCAGAGG---AATCCCGTCCGCCTGCGAGAAGT---CCTCGGATTCCGCGCTCACACGCC-CCTGGGGACCACCGTGCCTCGGGAATCCCGGGCAGAGC-------------CCAGACGT-CAGGGCCCGGGCCCACCAC-GGCGC---CCCAGGCCAGCCCCCCGGAGCGCGAGATC---CTCACCGGGGGCGGGGGCGAGCGCAGG------AGCGCAG------GG-----ACCCAGCGGG---------CAGCCCGCG-GCG-------- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M e panTro4.chr17 314612 1806 + 82630442 M a score=8864.000000 s hg38.chr17_GL383563v3_alt 358823 57 + 375691 GGCGCTGGGAAACGCCG-CGCTGTGGACTCGCTCCCCGGAACTCA---CCCGGCGCCGccc s chlSab2.chr16 225518 55 + 75148670 GGTGCTGGGAAACGC---CGCTGTGGACTCGCTCCCCGGAACTcg---cccggcgccgccc i chlSab2.chr16 C 0 C 0 s mm10.chr11 75966659 56 + 122082543 --CGCTGGGCTCCGC---ACTTGTTGACTCACTCGCGGGCGCGCTCGCCCCAGCGCCGCCT i mm10.chr11 C 0 I 1 s canFam3.chr9 15801355 57 - 61074082 GGCACCCGGTAACACGGCACTTGTTGACGCGCTCACGGGGAC-CGCTCGCCAGCGCCG--- i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e papAnu2.chr16 238498 136 + 74645514 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M e panTro4.chr17 314612 1806 + 82630442 M a score=4933.000000 s hg38.chr17_GL383563v3_alt 358880 32 + 375691 tcccccaccccccgccgcgtccccgccccccc-- s panTro4.chr17 316418 32 + 82630442 Tcccccaccccccgccgcgtccccgccccccc-- i panTro4.chr17 M 1806 C 0 s chlSab2.chr16 225573 26 + 75148670 tcccccg--ccccgccgcgt-cccgcccc----- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75966716 31 + 122082543 CCGTCCGCACCTc-ccgcgcccctcccccacc-- i mm10.chr11 I 1 I 2 s canFam3.chr9 15801412 34 - 61074082 CCTGGCGTCCGCAGCCGCAATCGCCCGCCTCTGG i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e papAnu2.chr16 238498 136 + 74645514 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M a score=10549.000000 s hg38.chr17_GL383563v3_alt 358912 13 + 375691 c----cacccgcacccc s panTro4.chr17 316450 17 + 82630442 ctccccacccgcacccC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 238634 13 + 74645514 ----CCACCCCCACCCC i papAnu2.chr16 M 136 C 0 s chlSab2.chr16 225599 13 + 75148670 ----ccacccccacccc i chlSab2.chr16 C 0 C 0 s mm10.chr11 75966749 13 + 122082543 ----ccgcccgcgcccc i mm10.chr11 I 2 C 0 s canFam3.chr9 15801446 13 - 61074082 ----CCGCCCGCTGCCC i canFam3.chr9 C 0 I 190 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M a score=38168.000000 s hg38.chr17_GL383563v3_alt 358925 93 + 375691 GAGCTG----------GGGGCACCACAGGGTCCCCGAGGGT----CCCCGAGG----------TCGGGGCGGAGCGCAGGCCGTTCGGAGC-GGGGGGCTCC--------GGGCCCGGGCGCTGCT s panTro4.chr17 316467 93 + 82630442 GAGCTG----------GGGGCACCGCAGGGTCCCCGAGGGT----CCCCGAGG----------TCGGGGCGGAGCGCAGGCCGTTCGGAGC-GGGGGGCTCC--------GGGCCCGGGCGCCGCT i panTro4.chr17 C 0 C 0 s papAnu2.chr16 238647 90 + 74645514 GAGCTG----------GGGGCGCCGCAGGATCCCCGAGGGT----CCCCGAGG-----------CCGGGCGGAACGCGAGCCGTTCGCAGT--GGGGGCTCC---------GGCCCGGGCGCTGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 225612 101 + 75148670 gAGCTG----------GGGGCGCCGCAGGATCCCCGAGGGT----CTCCGAGGGTCCCCGAGGCCGGGGCGGAGCGCGAGCCGTTCGGAGT--GGGGGCTCC---------GGCCCGGGCGCTGCT i chlSab2.chr16 C 0 C 0 s mm10.chr11 75966762 115 + 122082543 gcgccACTCCGCGCCCGGGACACACCCGGAGCCGCGCGAGGTACACCCTCCGC----------TCCGGGCTGTAGGCTAAAT-CCCGGAGTAAGAGCGCGCCGGCGGAGCGGACCGCGGCGCTGTC i mm10.chr11 C 0 C 0 e canFam3.chr9 15801459 190 - 61074082 I e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M a score=114989.000000 s hg38.chr17_GL383563v3_alt 359018 218 + 375691 CGGGGGAG--TCGGGTGCAGCCC--AGGCTCC------GGCCGCCGGCGGGA-------------------------GGAAACCCAGCTCCAGGCCCTGCCCGCGCCCCGCCG--GCCCC--GGAACCGCCCCCGCCCGGGGCGCCAAGAGCTCCCAGGTCCCCGCC--GCCTCCC-----------TGTGCGCCCCGCCGGCCCCGCCGCTGAGC----CGCGCGCA-CCCCCCGCCCTCG---------GACTGGGCCCCGGACC-CGGGGCGGCCCCGCTTC s panTro4.chr17 316560 218 + 82630442 CTGGGGAG--TCGGGTGCAGCCC--AGGCTCC------GGCCACCGGCGGGA-------------------------GGAAGCCCAGCTCCAGGCCCTgcccgcgccccgccg--gcccc--ggaatcgcccccgcccggggcgccAAGAGCTCCCAGGTCCCCGCC--GCCTCCC-----------TGTgcgccccgccggccccgccgctgagc----cgcgcgca-ccccccggcctcg---------gactgggccccggacc-cggggcggccccgcTTC i panTro4.chr17 C 0 C 0 s papAnu2.chr16 238737 191 + 74645514 CTGCGCAG--TCGGGTGCAgccc--aggctcc------ggcccccggcggga-------------------------ggaaacccggctccaggccctgcccccgccccgccg--gcccc--ggaatcgcccccacccgcggcgccacgagctcccgggtccccgc------------------------------------cctcgcc-cTGAGC----CACGCGCA-CCCCTCGGCCTCG---------GAC--GGCCCCGGACC-TGGGGCGGCCCCACTT- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 225713 215 + 75148670 CTGCGCAG--TCGGGTGCAGCCC--AGGCTCC------GG-CCCCGGCGGGA-------------------------GGAAACCCGGCTCCAGGCCCTGCCCCCGCCCCGCCG--GCCCC--GGAATCGCCCCCACTCGCCGCGCCAAGAGCTCCCGGGTCCCCGCC--GCCGCCC-----------TGCGCGCCCCGCCGGCCCCGCC-CTGAGC----CACGCGCACCCCCCCGGCCTCG---------GAC-AGGCCCCGGACC-TGGGGCGGCCCCACTT- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75966877 269 + 122082543 CCGGGACAGCTCTCCTGCAGCCCGGAGTCTCC------GG-CAACGGAGAGAGATAGAGGGCGGGCAAACCTAGGAGGGCAGCTGGGCACCAGGCCCTGCCCGCGCCCCAACGGTGCTCA--GGAACGGTCCCCACCCCAGGTTCCAACATCTACAGGATCTGAGCCCTAGCTCCCGGACCATCGCGTGCACGCGTTCTGGCCCCCATCTTGGAGCCAAACACACACA-CACCGGGGCCCCGA------GAGACTGGGCCCCAGAAAGGGGGGTGGCCCCACTTT i mm10.chr11 C 0 C 0 s canFam3.chr9 15801649 218 - 61074082 CGCGGCCG--CTGGGCCCAGCCC--GGGCTCCCGGAGAGGCGGACGGCGGGG-----------------------AGGGGAGCGCGGCGCTAGGGCCT-CCAgcgccccgcgg--gctcccggggctcgcccccgcgcccgA-GCCACAAGTTTTCAGGT----GGC--GCCTGCC----------------------AGGAGCCCGCC--GGAGC----CAGGCGCA-GCCCCCCACCCCGGCCCTCCGAGACCCGGCCCCGGGCGAGGGGGCGGCCGCACTT- i canFam3.chr9 I 190 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 216350 1384 + 73212453 M a score=85261.000000 s hg38.chr17_GL383563v3_alt 359236 81 + 375691 CCCCCCGGACTCACCCGGGGT-------------TCGGCCCCG--CAGCC-CGCGCGCTCCCTCGCTGCCCTCTGGCGGCAAAACCGTGAAACCGGC- s panTro4.chr17 316778 81 + 82630442 CCCCCCGGACTCACCCGGGGT-------------TCGGCCCCG--CGGCC-CGCGCGCTCCCTCGCTGCCCTCTGGCGGCAAAACCGCGAAAccggc- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 217745 81 + 73212453 CCCCCCGGACTCACCTGGGGT-------------TCGGCCCCG--CGGCC-CGTGCGTCAAAGGGCTGCCCTCTGGCGGCCAAACCGCGAAACCGGC- i ponAbe2.chr17 M 1384 I 23 s papAnu2.chr16 238928 79 + 74645514 CCCCCCGGACTCACCTGGGGT-------------TCGGCCCCG--CAGCC-CGCGCGCTCCCTCGCTGCCCTCTGGCGGC--AACCGGGAAAcccgc- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 225928 79 + 75148670 CCCCCCGGACTCACCTGGGGT-------------TCGGCCCCG--CAGCC-CGCGCGCTCCCTCGCTGCCCTCTGGCGGC--AACCGCGAAACCCGC- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75967146 78 + 122082543 --AGCTACACTTACCTGGGGC-------------TTCGCCCCGTCCGG----GCGCGCTCCCTGGCTGCCCTCTGGCGGCCACCTCAGGTAccgggc- i mm10.chr11 C 0 C 0 s canFam3.chr9 15801867 95 - 61074082 -TAGCCGCACTCACCTGGGGTGGGAGTGAggggggcggccctg--ccgccgggcgcgcgcccTGGCTGCCCTCTGCCGGCAGCCGCAGGTACCCGGGC i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I a score=6010.000000 s hg38.chr17_GL383563v3_alt 359317 11 + 375691 GCCCGCCCCGC s panTro4.chr17 316859 6 + 82630442 g-----cccgc i panTro4.chr17 C 0 C 0 s papAnu2.chr16 239007 10 + 74645514 gcccgccccg- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226007 10 + 75148670 GCCCGCCCCG- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75967224 11 + 122082543 gcgcgccccgc i mm10.chr11 C 0 I 5 s canFam3.chr9 15801962 11 - 61074082 Gcccgccccgc i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e ponAbe2.chr17 217826 23 + 73212453 I a score=36276.000000 s hg38.chr17_GL383563v3_alt 359328 39 + 375691 --------------------CCCGCCCCG-------CTGGGACCTGTGGCCGC-------AGAGCCCGGGCCG- s panTro4.chr17 316865 39 + 82630442 --------------------cccgcccgg-------cTGGGACCTGTGGCCGC-------AGAGCCCGGGCCG- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 217849 39 + 73212453 --------------------CCCGCCCGG-------CTGGGACCTGTCGCTGC-------AAAGCCCGGGCCG- i ponAbe2.chr17 I 23 C 0 s papAnu2.chr16 239017 39 + 74645514 --------------------cccgccccg-------cTGGGACCTGCGGCTGC-------AGAGCCCCGGCCC- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226017 39 + 75148670 --------------------CCCGCCCCG-------CTGGGACCTGCTGCTGC-------AGAGCCCCGGCCC- i chlSab2.chr16 C 0 C 0 s mm10.chr11 75967240 53 + 122082543 --------------------tccgccccTCTCTGACCTGGGACCTGTTCCTGCCAACTGAAGAGCTCTGGCCC- i mm10.chr11 I 5 C 0 s canFam3.chr9 15801973 65 - 61074082 cccgccccgccccgccccgccccgccccgccccgccccgccACCTGTTGCT---------GGAGCGCGGGGCCT i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e rheMac3.chr16 249362 1207 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I a score=57775.000000 s hg38.chr17_GL383563v3_alt 359367 63 + 375691 GAGG---GCACCTGCTG--------------GGCG------G-----CCTCTGGATGG-TGACCTCGCCGCGGGGCGGGTCCCCACGGTCTC s panTro4.chr17 316904 63 + 82630442 GAGG---GCACCTGCTG--------------GGCG------G-----CCTCTGGATGG-TGACCTCGCCGCGGGACGGGTCCCCACGGTCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 217888 63 + 73212453 GAGG---GCACAGGCCG--------------GGCG------A-----CCTCTGGATGG-TGACCTCGCCGCGGGACGGGTCCCCACGGTCTC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 250584 57 + 80904711 GAGG---GCACCTGCTGGGCGACCTCTGGATGGCG------A-----CCTCTGGAT---------------------GGTCCCCACGGCCTC i rheMac3.chr16 M 1207 C 0 s papAnu2.chr16 239056 43 + 74645514 GAGG---GCACCTGCTG--------------GGCG------A-----CCTCCGGAT---------------------GGTCCCCACGGCCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226056 43 + 75148670 GAGG---GCACCTGCTG--------------GGCG------A-----CCTCTGGAT---------------------GGTCCCCACGGCCTC i chlSab2.chr16 C 0 C 0 s mm10.chr11 75967293 70 + 122082543 GAGG---CCATCTGATA--------------GGCGCCATCCC-----CCTTTAGATGGCTCATCTTGGCACGGAGTGGATCTCGAGGGCTCC i mm10.chr11 C 0 I 1360 s canFam3.chr9 15802038 72 - 61074082 GAGGTCACCACCTGGTG--------------GGCG------GAGGACCCTCGGCACCGCCGCCCTCTCCACGGGACGGGTCTCCGGGGCCCC i canFam3.chr9 C 0 I 1011 e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I a score=254663.000000 s hg38.chr17_GL383563v3_alt 359430 213 + 375691 gctggacgg-caggggcgcggctcactgcagcctccgcctcctgggctccagcgaccctttcaccccagcctccccggcagtcgggaccgcaggcaccgctcccacgcccggccaatttttgtatgttttgtagagacgaggtcccactgtgttacccaggctggtctcgaactccaagcctcagtttctttatgtgcaaaacagagacaacaa s panTro4.chr17 316967 213 + 82630442 gctggacgg-caggggcgcggctcactgcagcctccgcctcctggggtccagcgaccctttcaccccagcctccccggcagtcgggaccgcaggcaccgctcccacgcccggccaatttttgtatgttttgtagagacgaggtcccactgtgttacccaggctggtctcgaactcaaggcctcaGTTTCTTTATGTGCAAAACAGAGACAACAA i panTro4.chr17 C 0 I 29535 s ponAbe2.chr17 217951 210 + 73212453 GCCGGAGGGTTAGGGGcgcggctccctgcaccctccgcctcctgggctccggcgaccctttcgccccagcctccccggccgtcgggaccgcatgcactgctcccgcaaccggctaatgtttgtatgatttgtggagacgaggttccgctatgttacccgggctggtctcgaactccaagcctcaGTTTCTT----TGCAGAACAGAGACAACAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 250641 212 + 80904711 gctggaggg-caggggcgcggctcactgcagcctccgcctcc-gggctccagcgaccctttcaccccagcctccccagtagtcggggccgtgggcagggctcccacacacggctaatttttgtatgttttgtagagacgaggtctcactgtgttacccaggctggtctcgaacttcaagactcagtttctttatgtgcaaaacagagacaacaa i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 239099 212 + 74645514 GCTGGAGGG-CAGGGgcgcggctcactgcagcctccgcctcc-gggCTCCAGCGACCCtttcaccccagcctccccagtagtcgGGGCCGCGGGCAGGGCtcccacacacggctaatttttgtacgttttgtagagacgaggtctcactgtgttacccaggctggtctcgaacttcaaGACTCAGTTTCTTTATGTGCAAAACAGAGACAACAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226099 212 + 75148670 gctggaggg-caggggcgcggctcactgcagcctccgcctcc-gggccccagcgaccctttcaccccagcctgcccagtagtcggggccgcgggcagggctcccacccacggctaagttttgtatgttttgtagagacgaggtctcattgtgttacccgggctggtctcgaacttcaagactcagtttctttatgtgcaaaacagagacaacaa i chlSab2.chr16 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15802110 1011 - 61074082 I e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I a score=50985.000000 s hg38.chr17_GL383563v3_alt 359643 68 + 375691 tagtcctgttgtgatgactgaatgagGTCGTGACCCCAGGTCTCGCTCACTGTAGGCCCCTCAGCTGG s ponAbe2.chr17 218161 67 + 73212453 TAGTCCTGTTGTGATGATTGAATGAGATTACGGCCCAAGGTCTCGCTCACTGTAGGCCCTCCA-CTGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 250853 67 + 80904711 tagtcctgttgtgatgattgaatgagattgtgacccaaggtctcgctcactacagaccctcaa-ttgg i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 239311 67 + 74645514 TAGTCCTGTTGTGATGATTGAATGAGATTGTGACCCAAGGTCTGGCTCACTACAGGCCCTCAA-GTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226311 67 + 75148670 tagtcctgttgtgatgattgaatgagATTGTGACCCGAGGTCTCGCTCACTACAGGCCCTCAG-TTGG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15802110 1011 - 61074082 I e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e panTro4.chr17 317180 29535 + 82630442 I a score=158144.000000 s hg38.chr17_GL383563v3_alt 359711 176 + 375691 AGAGCATTCTTAATGTTAATATTC-----CCTCCTCACCTC-CTAACCCTAAAGCCTCAAGGGTGCAGGAATTCCGCTGGCCTTAGCCCACC------------CCCCAGCCCCCAGGAGCTGCTCGCACCGCCGCTTGCACAGACGGGGGTAGACCACTCCGTGTCTCTGGGGTGACTCGACCTTCCTTGGGA s ponAbe2.chr17 218228 176 + 73212453 AGAGCGTTATTAATGTTAATATTC-----CCTCCTCACCTC-CTAACCCTAAAGCCTCAAGGGTGCAGGAATCCCACCGGCCTTAGCCCACC------------CCCCAGCCCCCGGGAGCTGCTCACACCGCCGCTTGCACAGACGGTGATCCACCACTCGGTGCCTCCGGGGTGACTCGACCTTCCTTGGGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 250920 176 + 80904711 aaaacattattaatgataATGTTC-----CCTCGTCACTTC-TTAACCCTAAAGCCTGGAGGGGGCGGGAATTCCACGGGCCTTAGCCCACC------------ACCCAGCCCCCAGGAGTTGCTCACACCGCCGCCTGCACAGACGGTGGCAGACCACCCGGTGTCTTGGGGGTGACTCAGCCTTCCCTGGGA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 239378 176 + 74645514 AAAGCATTATTAATGATAATATTC-----CCTCGTCACTTC-TTAACCCTAAAGCCTGGAGGGGGCAGGAATTCCACGGGCCTTAGCCCACC------------ACCCAGCCCCCAGGAGTTGCTCACACCGCCGCCTGCACAGACCGTGGCAGACCACTCGGTGTCTTGGGGGTGACTCAGCCTTCCCTGGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226378 169 + 75148670 AAAGCATTGTTAATGATAATATTC-----------CACTTC-TTAACCCTAAAGCCTGGAGGGGGCAGGAATTCCACGGGCCTTAGCCCACC------------ACCCAGCCCCGAGGAGTTGCTCGCACCGCCGCTTGCACAGACGGTGGCAGACCACTC-GTGTCTCCGGAGTGACTCAGCCTTCCCTGGGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15803121 193 - 61074082 AGGGACTTTTTAACATTAATTTTCACCATCACCATCACCTCACTAACTCTAAAAGGTCAAGGCTGCAGGGATTTTACAGGCTCTACCCCACCTACCCACTCCAAAACCACCCTCCAGGAGTTGCTCACA-TGCTGCTGGCAGAGCCTGTGACAGAACACCTAGCCTCTCTGGGGGAACCTAATTTCTCTTCGGA i canFam3.chr9 I 1011 C 0 e mm10.chr11 75967363 1360 + 122082543 I e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321419 100 - 81552678 I e panTro4.chr17 317180 29535 + 82630442 I a score=22835.000000 s hg38.chr17_GL383563v3_alt 359887 21 + 375691 TGGCCAACCGCCTGAGAAAGA s ponAbe2.chr17 218404 8 + 73212453 TGGCCAAC------------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 321519 21 - 81552678 TGGCCAACCGCCTGAGAAAGA i nomLeu3.chr19 I 100 C 0 s rheMac3.chr16 251096 21 + 80904711 CTGCCAACCGCCTGAGAAAGA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 239554 21 + 74645514 CTGCCAACCGCCTGAGAAAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226547 21 + 75148670 CTGCCAACCGCCTGAGAAAGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 15803314 21 - 61074082 CTGCTAACCACCTGGAGAAGA i canFam3.chr9 C 0 I 14388 e mm10.chr11 75967363 1360 + 122082543 I e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=415799.000000 s hg38.chr17_GL383563v3_alt 359908 350 + 375691 CGCATAGGTGACCCGAGGCTGCCTCCCTGAAGCCTTCCTCTTGGCTATAGCTGTACCCCTGTGGAGCCCACACGAACCCAATCGCCCAACCTTCTATTC----ACCATTACAGCTTTCAGTAAACACTCGTTGCACCTCTGCTCTGTGCC-AGCTCTTCCTAGACGGGATTCTCACATGTTTCACTTAACCCCTGTTTTCCCAGGTCTT-ACCACATAAGGTCCGAATGACAGTAACAAAACCATCTTTTTCTGTCTGTGCCCTGAGGATAGCTAACAGGTGAACACAGGTGCAGCCTCCTGGCTAACTCCAGAAACCACTCCCTTCTCTCCTGCCCCAGCGTTTGTCCCCTTGGC s ponAbe2.chr17 218412 349 + 73212453 -GTATAGGTGACCTGAGGCTGCCTCCCTGAAGCCTTCCTCTTGGCTATAGCTGTACCCCTGTGGAGCCCACACGAACCCAATCGCCTAACCTTCTATTC----ACCATTACAGCTTTCGGTAAACACTCGTTGCACCTCTGCTCTGTGCC-AGCTCTTCCTAGACGGGATTCTCACACGTTTCACTTAACCCTTGTTTTCCCAGGTCTT-ACCACATAAGGTCCGAATGACAGTAACGAAACCACCTTTATCTGTCTGTGCCCTGGGGATAGCTAACGGGTAAACACAGGTGCAGCCTCCTGGCTAACTCCAGAAACCACTCCCTTCTCTCCTGCCCCAGCGTTTGTCCCCTTGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 321540 330 - 81552678 CGTCTAGGTGACCCGAGGCTGCCTCCCTGAAGCCTTCCTCTTGGCTATAGCTGCACCCCGGTGGAGCCCACACAAACCCAGTCACCCAAACTTCTATTC----ACCATTGCAGCTTTCAGTAAACACTCGCTGCACCTCTGCTCTGTGCC-AG------------------CTCACGCGTTTCACTTAACCC-TGTTTTCCCAGGTCTT-ACCATATAAGGTCCGAATGACAGTAACAAAACCACCTTTATCTGTCTGTCCCCTGGAGATATCTAACAGGTGAACACAGGTGCAGCCTCCT-GCTAACTCCAGAAACCACTCCCTTCTCTCCTGCCCCAGCGTCTGTCCCCTTGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251117 354 + 80904711 CGTATAGGTGACCTGAGGCTG-CTCCCTGCAGCCTTCCTCTTGGCTCTAGCTGTACCCCGGGGGAGCCCACACGAACCCAATCCCCCAACCTTCTATTCCTTGACTATTACAGCTTTCAGTAAATACTTGTTGCACCTCTGCTCTGTGCC-AGCTCTTCCTAAATGGGATTCTCACACGTTTCACTTAACCCTTGTTTTCCCAGGTCTTAACCACATAAGGTCCCAATGACAGTAACAAAACCACCTTTCTCTGTCTGTGCCCTGGGGATGGCTAACAGATGAACACAGGTGCAGCCTCCTGGCTAACTCCAGAAGCCAATCCCTTCTCTCCTGCCCCAGTGTTTGTCCCCTTGGC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 239575 347 + 74645514 CGTATAGGTGGCCTGAggctg-ctccctgcagccttccTCTTGGCTCTAGCTGTACCCCAGGGGAGCCCACACGAACCCAATCCCCCAACCTTCTATTCCTTGACGATTACAGCTTTCAGTAAATAC---TTGCACCTCTGCTCTGTGCC-AGCTCTTCCTAAATGGGATTCTCACACGTTTCACTTAACCCTTGTTTTCCCAGGTCTTAACCACATAAGGTCCCAATGACAGTAACAAAACCACCTT----TGTCTGTGCCCTGGGGATGGCTAACAGATGAACACAGGTGCAGCCTCCTGGTTAACTCCAGAAGCCAATCCCTTCTCTCCTGCCCCAGTGTTTGTCCCCTTGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226568 356 + 75148670 CGTATAGGTGACCTGAGGCTGCCTCCCTGCAGCCTTCCTCTTGGCTCTAGCTGTACCCCCGGGGAGCCCACACGAACCCAATCCCCCAACCTTCTATTCCTTCACCATTACAGCTTTCAGTAAATACTTGTTGCACCTCTGCTCTGTGCCAAGCTCTTCCTAAATGGGATTCTCACACGTTGCACTTAACCCTTGTTTTCCCAGGTCTTAACCACATAAGGTCCCAATGACAGTAACAAAACCACCTTTCTCTGTTTGTGCCCTGGGGATGGCTAACAGATGAACACAGGTGCAGCCTCCTGGCTAACTCCAGAAGCCACTCCCTTCTCTCCTGCCCCAGTGTTTGTCCCCTTGGC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1049697 1753 - 1291538 M e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=143133.000000 s hg38.chr17_GL383563v3_alt 360258 127 + 375691 CCACAAGGCAGCACACTCAGGACCGTTCCACTCCCCTTCCCCCGACCCAGTGTGAGGCGGCCTCATCCTCTCATGGTGGGTGGGGTGGGGGGG--CTCCTGCATGCTCACTGCAGAGTGGGGGCTGATG s ponAbe2.chr17 218761 123 + 73212453 CCACAAGGCAGCACACTCAGGATTGTTCCACTCCCCTCCCCCCGACCCAGTGTGAGGCAGCCTCATCCTCTCATGGCGGGTG----GGGGGGG--CTCCTGCACACTCACTGCAGCGGGGGGGCTGCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 321870 125 - 81552678 CCACAAGGCAGCACACTCAGGACTGTTCCACTTCCCTCCCCCCGACCCAGTGTGGGGCAGCCTCATCCTCTCATGGCGGGTG----GGGGGAGCTCTCCTGCATGCTCACTGCAGAGTGGGGGCTGCTG i nomLeu3.chr19 C 0 I 2 s rheMac3.chr16 251471 115 + 80904711 TCACAAGGCAGCACACTCAGGACTGTTCCACTCCCCTCCCCCC-ACCCAGTGTGAGACGCCCTCATCCTCTCAC---GGGCG----GGGG-----CTCCTGCATGCTCACTGC-GGGGGGGGGCTGCTG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 239922 120 + 74645514 TCACAAGGCAGCACACTCAGGACTGTTCCactcccctccccccaacccaGTGTGAGATGCCCTCATCATCTCACGGTggggg----gggg-----CTCCTACATGCTCACTGCAGAGAGGGGGCTGCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 226924 92 + 75148670 TCACAAGGCAGCACACTCAGGACTGTTCCACTCCCCTCCCCCTAACCCAGTGTGAGACGCCCTCATCCTCTCAC---GGG----------------------------------GGGGGGGGGCTGCTG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051503 100 - 1291538 CCACAAAGCAGCACACTCTGGACTGTT-CACTCCCCTCCCACAGACCCAGTGTGAGACGGCCTCATCCTCTCCT---GGAAA-------------CTCCTGCATGCTCACTGCAGAG------------ i calJac3.chrUn_GL286409 M 1753 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=1476.000000 s hg38.chr17_GL383563v3_alt 360385 2 + 375691 CC s ponAbe2.chr17 218884 2 + 73212453 TC i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 251586 2 + 80904711 CC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 240042 2 + 74645514 CC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227016 2 + 75148670 CC i chlSab2.chr16 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1051603 0 - 1291538 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 321995 2 - 81552678 I e panTro4.chr17 317180 29535 + 82630442 I a score=11695.000000 s hg38.chr17_GL383563v3_alt 360387 9 + 375691 ACACAGGTG s ponAbe2.chr17 218886 9 + 73212453 ACACAGGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 321997 9 - 81552678 ACACAGGTG i nomLeu3.chr19 I 2 C 0 s rheMac3.chr16 251588 9 + 80904711 ACACAGGTG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 240044 9 + 74645514 ACACAGGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227018 9 + 75148670 ACACAGGTG i chlSab2.chr16 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1051603 0 - 1291538 C e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=48409.000000 s hg38.chr17_GL383563v3_alt 360396 53 + 375691 TTCACACGTGTGCACCC-CACCCTA-ACCAGCCACCGGGCTGCACAGCCCCTCAC s ponAbe2.chr17 218895 53 + 73212453 TCCACACGAGTGCACCC-CACCCTA-ACCAGCCACCAGGCTGCACAGCTCCTCGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322006 53 - 81552678 TCCACAGGTGTGCACCC-CACCCTA-ACCAGCCACCAGGCTGCACAGCCCCTCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251597 53 + 80904711 TCCACACGTGTGCACCC-CCCCCAG-ACCAGGCGCCAGGCTGCACAGCCCCTCAG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 240053 54 + 74645514 TCCACACGTGTGCACCCGCCCCCCG-ACCAGGCACCAGGCTGCACAGCCCCTCAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051603 47 - 1291538 -------GTGAGCTCCC-CACCCAAGACCTGGCACCAGGACGCACAGCCTCTCTC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227027 0 + 75148670 C e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=19461.000000 s hg38.chr17_GL383563v3_alt 360449 14 + 375691 TCCACACGTGTGCA s ponAbe2.chr17 218948 14 + 73212453 TCCACACGAGTGCA i ponAbe2.chr17 C 0 I 3250 s nomLeu3.chr19 322059 14 - 81552678 TCCACATGTGTGCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251650 14 + 80904711 TCCACACGTGTGCA i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 240107 14 + 74645514 TCCACACGTGTGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227027 14 + 75148670 TCCACATGTGTGCA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051650 12 - 1291538 GCCACATGTGTA-- i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=57433.000000 s hg38.chr17_GL383563v3_alt 360463 40 + 375691 CCCCA----CCCTAGACCAGCCACCGGGCTGCACAGCCCCTCAC s ponAbe2.chr17 222212 40 + 73212453 CCCCA----CCCTAAACCAGCCACCAGGCTGTACAGCTCCTCAC i ponAbe2.chr17 I 3250 C 0 s nomLeu3.chr19 322073 40 - 81552678 CCCCA----CCCTAGACCAGGCACCAGGCTGCACAGCCCCTCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251664 40 + 80904711 CCCCA----CCCTAGACCAGCTACCAGGCTGCACAGCCCCTCAG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 240121 44 + 74645514 CGCCATcccccccAGACCAGGCACCAGGCTGCACAGCCCCTCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227041 40 + 75148670 CCCCA----CCCCAGACCAGGCGCCAGACTGCACAGCCCCTCAG i chlSab2.chr16 C 0 T 54 s calJac3.chrUn_GL286409 1051662 40 - 1291538 CCCCA----TCTGAGACCTGTCACTAGGCCCCACAGCCCCTCGC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=62436.000000 s hg38.chr17_GL383563v3_alt 360503 44 + 375691 TCCACACGTGTGCACCCCA---CCCTAGACCAGGCACCGGGCTGCAC s ponAbe2.chr17 222252 43 + 73212453 TCCACACGAGTGCACCCCA---CCCTAGACCAGGCAC-AGGCTGTAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322113 43 - 81552678 TCCACACGTGTGCGCCCCA---CCCTA-ACCAGCCACCAGGCTGCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251704 44 + 80904711 TCCACACGTGTGCACCCCA---CCCTAGACCAGCTACCAGGCTGCAC i rheMac3.chr16 C 0 I 29 s papAnu2.chr16 240165 47 + 74645514 TCCACACGTGTGCACGCCAcccccccAGACCAGGCGTCAGGCTGCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227027 44 + 75148670 TCCACATGTGTGCACCCCA---CCCCAGACCAGGCGCCAGACTGCAC i chlSab2.chr16 T 54 C 0 s calJac3.chrUn_GL286409 1051702 44 - 1291538 CCCACATGTGTGTACCCCA---CCTGAGACCTGGCACCAGGCTGCAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=27778.000000 s hg38.chr17_GL383563v3_alt 360547 27 + 375691 AGCCCCTCACTCCACACGTGTGCACCC s ponAbe2.chr17 222295 27 + 73212453 AGCTCCTCACTCCACACGAGTGCACCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322156 27 - 81552678 AGCCCCTCACTCCACACGTGTGCGCCC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240212 25 + 74645514 AGCCCCTCAGTCCACAC--GTGCACCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227071 27 + 75148670 AGCCCCTCAGTCCACACGTGTGTACCC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051746 27 - 1291538 AGCCTCTCTCGCCACACATGTGTACCC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e rheMac3.chr16 251748 29 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=26035.000000 s hg38.chr17_GL383563v3_alt 360574 17 + 375691 CACCCTAGACCAGGCAC s ponAbe2.chr17 222322 17 + 73212453 CACCCTAGACCAGGCAC i ponAbe2.chr17 C 0 I 52 s nomLeu3.chr19 322183 17 - 81552678 CACCCTAGACCAGGCAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251777 17 + 80904711 CACCCTAGACCAGGCGC i rheMac3.chr16 I 29 C 0 s papAnu2.chr16 240237 17 + 74645514 CACCCTAGACCGGCTAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227098 17 + 75148670 CACCCTAGACCAGGCAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051773 17 - 1291538 CATCTGAGACCTGTCAC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=845.000000 s hg38.chr17_GL383563v3_alt 360591 1 + 375691 C s nomLeu3.chr19 322200 1 - 81552678 C i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251794 1 + 80904711 C i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 240254 1 + 74645514 C i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227115 1 + 75148670 C i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051790 1 - 1291538 T i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e ponAbe2.chr17 222339 52 + 73212453 I e panTro4.chr17 317180 29535 + 82630442 I a score=3279.000000 s hg38.chr17_GL383563v3_alt 360592 2 + 375691 GG s ponAbe2.chr17 222391 2 + 73212453 AG i ponAbe2.chr17 I 52 C 0 s nomLeu3.chr19 322201 2 - 81552678 AG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251795 2 + 80904711 AG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 240255 2 + 74645514 AG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227116 2 + 75148670 AG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051791 2 - 1291538 AG i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=16520.000000 s hg38.chr17_GL383563v3_alt 360594 13 + 375691 GCTGCACAGCCCC s ponAbe2.chr17 222393 13 + 73212453 GCTGTACAGCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322203 13 - 81552678 GCTGCACAGCCCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251797 13 + 80904711 ACTGCACAGCCCC i rheMac3.chr16 C 0 T 110 s papAnu2.chr16 240257 13 + 74645514 GCTGCACAGCCCC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051793 13 - 1291538 GCCGCACAGCCCC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=26769.000000 s hg38.chr17_GL383563v3_alt 360607 28 + 375691 ACACTCCACACGTGTGCACCCCACCCTA s ponAbe2.chr17 222406 28 + 73212453 TCACTCCACACGAGTGCACCCCACCCTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322216 28 - 81552678 TCACTCCACACGTGTGCGCCCCACCCTA i nomLeu3.chr19 C 0 T 107 s rheMac3.chr16 251700 28 + 80904711 TCAGTCCACACGTGTGCACCCCACCCTA i rheMac3.chr16 T 110 I 1 s papAnu2.chr16 240270 26 + 74645514 TCAGTCCACATGTGTGCAccc--ccccA i papAnu2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 1051806 28 - 1291538 TCCCCCCACATGTGTGTACCCCACCAGA i calJac3.chrUn_GL286409 C 0 I 1 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=22290.000000 s hg38.chr17_GL383563v3_alt 360635 19 + 375691 ACCAGCCACCGGGCTGCAC s ponAbe2.chr17 222434 19 + 73212453 ACCAGCCACCAGGCTGTAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322137 19 - 81552678 ACCAGCCACCAGGCTGCAC i nomLeu3.chr19 T 107 C 0 s rheMac3.chr16 251729 19 + 80904711 ACCAGCTACCAGGCTGCAC i rheMac3.chr16 I 1 I 148 s papAnu2.chr16 240297 19 + 74645514 ACCAGGCGCCAGGCTGCAC i papAnu2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 1051835 19 - 1291538 ACCTGGCACCAGGCTGCAC i calJac3.chrUn_GL286409 I 1 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=26109.000000 s hg38.chr17_GL383563v3_alt 360654 34 + 375691 AGCCCCTCACTCCACACGTGTGCACCCCACCCTA s ponAbe2.chr17 222453 34 + 73212453 AGCTCCTCACTCCACACGAGTGCACCCCACCCTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322156 34 - 81552678 AGCCCCTCACTCCACACGTGTGCGCCCCACCCTA i nomLeu3.chr19 C 0 I 1 s papAnu2.chr16 240316 34 + 74645514 AGCCCCTCAGTCCACACGTGTGCACCCCACCCTA i papAnu2.chr16 C 0 T 53 s calJac3.chrUn_GL286409 1051854 34 - 1291538 AGCCTCTCTCATCACACGTGTGTGCCCCATCCTA i calJac3.chrUn_GL286409 C 0 I 1 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=9314.000000 s hg38.chr17_GL383563v3_alt 360688 12 + 375691 ACCAGCCACCGG s ponAbe2.chr17 222487 12 + 73212453 ACCAGCCACCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322191 12 - 81552678 ACCAGGCACCAG i nomLeu3.chr19 I 1 C 0 s papAnu2.chr16 240297 12 + 74645514 ACCAGGCGCCAG i papAnu2.chr16 T 53 C 0 s calJac3.chrUn_GL286409 1051889 12 - 1291538 ACCAGGCACCAG i calJac3.chrUn_GL286409 I 1 T 54 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=12402.000000 s hg38.chr17_GL383563v3_alt 360700 17 + 375691 GCTGCACAGCCCCGCAC s ponAbe2.chr17 222499 17 + 73212453 GCTGTACAGCTCCTCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322203 17 - 81552678 GCTGCACAGCCCCTCAC i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240309 17 + 74645514 GCTGCACAGCCCCTCAG i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051847 17 - 1291538 GCTGCACAGCCTCTCTC i calJac3.chrUn_GL286409 T 54 C 0 e mm10.chr11 75967363 1360 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=20038.000000 s hg38.chr17_GL383563v3_alt 360717 23 + 375691 TCCACACGTGTGCA------CCCCACCCT s ponAbe2.chr17 222516 23 + 73212453 TCCACACGAGTGCA------CCCCACCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322220 23 - 81552678 TCCACACGTGTGCG------CCCCACCCT i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240326 23 + 74645514 TCCACACGTGTGCA------CCCCACCCT i papAnu2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 1051864 23 - 1291538 ATCACACGTGTGTG------CCCCATCCT i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75968723 29 + 122082543 TCCACGAATGTGAATATATTCACCATCTT i mm10.chr11 I 1360 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=755.000000 s hg38.chr17_GL383563v3_alt 360740 1 + 375691 A s ponAbe2.chr17 222539 1 + 73212453 A i ponAbe2.chr17 C 0 I 55 s nomLeu3.chr19 322243 1 - 81552678 A i nomLeu3.chr19 C 0 I 1 s papAnu2.chr16 240350 1 + 74645514 G i papAnu2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 1051887 1 - 1291538 A i calJac3.chrUn_GL286409 C 0 I 1 s mm10.chr11 75968752 1 + 122082543 A i mm10.chr11 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=10399.000000 s hg38.chr17_GL383563v3_alt 360741 10 + 375691 -ACCAGCCACC s ponAbe2.chr17 222595 10 + 73212453 -ACCAGCCACC i ponAbe2.chr17 I 55 C 0 s nomLeu3.chr19 322245 10 - 81552678 -ACCAGCCACC i nomLeu3.chr19 I 1 C 0 s papAnu2.chr16 240351 10 + 74645514 -ACCAGGCGCC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051889 10 - 1291538 -ACCAGGCACC i calJac3.chrUn_GL286409 I 1 I 2 s mm10.chr11 75968753 11 + 122082543 GGCCAATCACC i mm10.chr11 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227118 0 + 75148670 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=-1423.000000 s hg38.chr17_GL383563v3_alt 360751 2 + 375691 CA s ponAbe2.chr17 222605 2 + 73212453 AG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322255 2 - 81552678 AG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240361 2 + 74645514 AG i papAnu2.chr16 C 0 C 0 s mm10.chr11 75968764 1 + 122082543 A- i mm10.chr11 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1051899 2 - 1291538 I e chlSab2.chr16 227118 0 + 75148670 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=238950.000000 s hg38.chr17_GL383563v3_alt 360753 187 + 375691 GCTGCACAGCCCCTCACTCCAATGTCATGGGGAGGGGCTGGTGATACAGCC------CTTTTACTAACTCCTCTTCCCATAATCTAGGCAAGAGCCTCATTCCCCATCTACTCAATGACATTCAAAGTGGTCTCCTGTCTTTGCTTTTTGCTCCTTGGTCCAAGCAAGCTCATTTCTTCTCTTTCTTCAAATA s ponAbe2.chr17 222607 187 + 73212453 GCTGCACAGCTCCTCACTCCAATGTCATGGGGAGGGGCTGGTGATGCAGCC------CTTTTACTAACTCCTCTTCCCATAGTCTAGGCAAGAGCCTCATTCCCCATCTACTCAGCGACATTCAAAGTGGTCTCCTGTCTTCTCTTTTTGCTCCTTGGTCCAAGCAAGCTCATTTCTTCTCTTTCTTCAGATA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322257 187 - 81552678 GCTGCACAGCCCCTCACTCCAATGTCATGGGGAGGGGCTGGTGATGCAGCC------CTTTTACTAACTCCTCTTCCCATAGTCTAGGCAAGAGCCCCACTCCCCATCTACTCAGCAATATTCAAAGTGGTCTCCTGTCTTCTCTTTTTGCTCCTTGATCCAAGCAAGCTCATTTCTTCTCTTTCTTCAAATA i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240363 190 + 74645514 ACTGCACCGCTCCTCGTGCCAATGTCATGGGGAGGGGCTGGTGATGCAGCCCTTTTACTTTTACTAACTTCTCTTCCCATAGTCTAGGCAAGAGCCTCGTTCCCCATCTACTCAGCGACATTCGAAGtggcctc---tcttctctttttgctcCTTGGTCCAAACAAgctcatttcttctctttcttcaaata i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227118 190 + 75148670 ACTGCACAGCTCCTCGTGCCAATGTCATGGGGAGGGGCTGGTGACGCAGCCCTTTTACTTTTACTAACTTCTCTTCCCATAGTCTAGACAAGAGCCTCATTCCCCATCTACTCAGTGATATTCGAAGTGGCCTC---TCTTCTCTTTTTGCTCCTTGGTCCAAACAAGCTCATTTCTTCTCTTTCTTCAAATA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1051901 190 - 1291538 GCCGCACAGCCCCTCATGCCAGTGTCATGGGGA-GGGCTCGTGATGCAGCCCTTTTACTCTTACTACCTCCTCTTCCCATAGTCTAGGCAAGAGCCTCATTCTCTGTCTACTCAACAACATTCAAAATGGTCTCCTCTCTTTTGTTTTTGCTCCTTGGTCCAAACAAGCTCATATCT--TCTTTCTTCAAATT i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75968765 151 + 122082543 GCTGCATGGGCTCTTGTTCCAAGGT-------------------------TCTTTTATCCTTGTTAACTTTTCTT-CCATGTTATAGG--GGAACCTC-TTCCACATCCACTTGGCAAAATTCACACTGGCCTC------ATCCTTTTCGCTCTTTGATCCAAGCAAA-------CTTTTCTTTCTTAGAATG i mm10.chr11 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 317180 29535 + 82630442 I a score=20660.000000 s hg38.chr17_GL383563v3_alt 360940 14 + 375691 AATTAC---TGGGATTA s panTro4.chr17 346715 14 + 82630442 AATTAC---TGGGATTA i panTro4.chr17 I 29535 C 0 s ponAbe2.chr17 222794 14 + 73212453 AATTAC---TGGGATTA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322444 14 - 81552678 AATTAC---TGAGATTA i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240553 13 + 74645514 aattat----ggaatta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227308 13 + 75148670 AATTAC----GGAATTA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1052091 14 - 1291538 AATTAC---AGGGATTA i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75968916 17 + 122082543 GATTACAGATGGGGTCA i mm10.chr11 C 0 I 401 e canFam3.chr9 15803335 14388 - 61074082 I e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M a score=34599.000000 s hg38.chr17_GL383563v3_alt 360954 51 + 375691 CTAATagagagacagacagac--agacagacagagacagagagagagagagaT s panTro4.chr17 346729 33 + 82630442 CTAATAGAGAGACAGACAGAC--AGACAGA------------------GAGAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 222808 41 + 73212453 CTAATagacagacagacagac--agacaga----------gagagagagagac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322458 49 - 81552678 CTAATagacagacagacagac--agacaga--gacagagagagagagacagaT i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240566 29 + 74645514 ctcacagagagac----agac--agacaga------------------gagat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227321 31 + 75148670 CTAACagagagacag--agag--agagaga------------------gagaT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1052105 35 - 1291538 CTAATAGACAGACAGACAAACAGAGACAGA------------------GAGAT i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75968933 401 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M a score=275035.000000 s hg38.chr17_GL383563v3_alt 361005 183 + 375691 CTTGCTAGCCATAAATCCAACGATTCTCTAAATAAGGCGAACTCTTCatttactcatcaacaga---taattgttatgca-------------cagttgcaggagctggggatacagaggtgaagagaat-------cccctgcctccaaggagcttgctgtctagagaggggagcagacttcaagt--------gaataaatgaacactacTG s panTro4.chr17 346762 183 + 82630442 CTTGCTAGCTGTAAATCCAACGATTCTCTAAATAAGGCGAACTCTTCatttactcatcaacaga---taattgttatgca-------------cagttgcaggagctggggatacagaggtgaagagaat-------cccctgcctccaaggagcttgctgtctagagaggggagcagacttcaagt--------gaataaatgaACACTCCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 222849 171 + 73212453 CTTGCTAGCTATAAATCCAACGATTCTCTAAATAAGGTGGACTCCTcatttactcatcaacaga---taattgtt-------------------------aggagctggggatacagaggtgaagagaat-------cctttgcctccaaggagcttgctgtctagagatgggagcagacttcaagt--------gaataaatgaacactacTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322507 183 - 81552678 CTTGCTAGCTGTAAATCCAACGATTCTCTAAATAAGGTGAACTCCTCGtttactcatcaacaga---taattgtgatgca-------------ctgttgcaggagctggggatacagaggtgaagagaat-------cctctgcctccaaggagcttgctgtccagagaggggagcagacttcaagt--------gaataaatgaacaCTCCTG i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240595 189 + 74645514 cTTGCTAGCTGTACATCCAGCGGTTCTCTAAACAAGGTGAACTC--CATTTACTCATCAACAGA---TAACTGTTGTGCA-------------CTGTCGCAGGAGCTGGGGATACAGAGGTGAAGAGACT-------CCTCTCCCTCCAAGGAGCTTGCTGTCTAGAGAGGGGAGCAGCCTTCAAACAGATAAAGGGACAAATGAACACTACTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227352 181 + 75148670 CTTGCTAGCTGTAAATCCAGCGGTTCTCTAAACAAGGTGAACTC--Catttactcatcagcaga---taactgttgtgca-------------ctgttgcaggagctggggatacagaggtgaagagact-------cctctccctccaaggagcttgctgtctagagaggggagcagccttcaaat--------gaataaatgaacactacta i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1052140 132 - 1291538 CTTGCTAGCTGCAAACCCAGCGATTCTCTAAATAAGGTGAAGTCTTCATTTACGTaac-------------------------------------------------------------------agact-------cctctgcctctaaagagcttgctgtctagagaggggggcagatttcaaac--------gaataaaCGAACGCTTCTG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75969334 201 + 122082543 CTTGCCAGCTGCAGGCCCACCTGTCCTCTAAAGAAGGCAGACTCTTCATTCACT-GTCAACACAGTGCCATTGTTCTGCAACAGAGAGTAATTATGTTG-AGGTACCGGGGACTC--AGGTGAACAAACTGGAAGGGCTTCTGCTTCCCAAGAGCTTTTACAGCAGAGATGAGAATGGAC-TCGGAT--------GCATAAGGGAGCAGTGGTG i mm10.chr11 I 401 I 51 e canFam3.chr9 15803335 14388 - 61074082 I e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M a score=383603.000000 s hg38.chr17_GL383563v3_alt 361188 283 + 375691 GGCACTTCCTATTGTCTAGGAATTTCTACTAGGAGCGCtgtcttagtctgttctctgtttctataacataatgccaccgaccgagtaaattataaag-aaaaaaagtatattcagttcatggttctggagcctgggaagtccaagagcatggcaccagcatgtggcgagggcaggtcatctcggtggaagttagaaggcaaaagccagtgtgcgcacagcggagggagagtcgccagggtcag-ctcactttagaacaacgtgctctcatgagacctaactcact s panTro4.chr17 346945 283 + 82630442 GGCACTTCCTATTGTCTAGGAATTTCTACTAGAAGCGCtgtgttcgtctgttctctgtttctataacataatgccaccgaccgagtaaattataaag-aaaaaaagtatattcagttcatggttctggagcctgggaagtccaagagcatgacaccagcatgtggcgagggcgggtcatctccgtggaagttagaaggc-aaagcaagtgtgcgcacagcggagggagagtcgccagggtcagactcactttagaacaacgtgctctcacgagacctaactcact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 223020 284 + 73212453 GGCACTTCCTATTGTCTAGGAATTTCTACTAGAACCGCtgccttagtctgttatatttttctataacataatgccaccaactgagtaaattgtaaag-aaaaaaagtatattcagttcgtggtttgggagcctgggaaattcaagagcatggcaccagcatttggcgagggcgggtcatttcggtggaagttagaaggcaaaagctagtgcgcccacgacggagggagagtcaccagggccagactcgctttagaacaacctgctctcacgagacttaactcaAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322690 275 - 81552678 GACGCTTCCTGTTGTCTGGGAGTTTCTACTAGAACCGCtgtcttagtctg-------tttctataacataa-gccaccgacccagcaaattgtaaag-aaaaaacgtagattcagttcatgtttctggagcctgggaagtacaa-agcatggcgccagcacttggcgagggcaggtcacctcggtgcaagttagaaggcaaaagcaagtgggcgcaccacagaggggaagtcaccagggccagactcactttagaacaacctgctctcacgagacctaactcact i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 240784 285 + 74645514 GGCACTTCCTATTGTCTAGGAATTTCTACTAGAACCGCTGTCTTAGTCTGCTCTCTGTTTCCGTAACATAATGCCACTGACCgagtaaattataaagaaaaaaaagcgtATTCAGTTCAtggttctggagcctgggaagtccgaGAGCATGGCACCAGCGTTTGGTGAGAGCAGGTCATCTCGGTGGAAGTTAGAAGGCAAAAGCAAGTACGCACACAACGGAGGGAGAGTCACCAGGGTCAGACTCACTTTAGAACAACCTGCTTTCACGAGACCTAACTCACT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227533 285 + 75148670 gGCACTTCCTATTGTCTAGGAATTTCTACTAGAACTGCtgtcttagtctgttctctgtttctataacataatgccactaactgagtaaattataaagaaaaaaaagtgtattcagttcacggttctggagcctgggaagtccaagagcatggcaccagcgtttggtgagagcaggtcacctcagtggaagttagaaggcaaaagcaagtacgcacacaacggagggagagtcaccagggtcagactcactttagaacaacctgctctcacgagacctaactcact i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1052272 216 - 1291538 GGCACTCCCTGTTGTCTCAG--------------------------------------------------ACGccaccaaccgagtaaattataaag---------tattttcagttcacagttctggaggct-ggaagtccaagagtggggtgcccgtgtttggtgagggcgggtcatctcggcggaagttagacggcaaaagCAAGTGTGTC--CGACAGAGGGTGAGTCACCA----CAGACTCACTTC---ACAACATGCTCTCAGGAGACCACATTCACT i calJac3.chrUn_GL286409 C 0 I 1078 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M a score=15555.000000 s hg38.chr17_GL383563v3_alt 361471 13 + 375691 tctgccagaacaa s panTro4.chr17 347228 13 + 82630442 tctgcgagaaCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 223304 13 + 73212453 TTTGCCAGAACAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322965 13 - 81552678 tctgccagagcaa i nomLeu3.chr19 C 0 C 0 s papAnu2.chr16 241069 13 + 74645514 TCCGCCAGAACAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227818 13 + 75148670 tctgccagaacaa i chlSab2.chr16 C 0 C 0 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1052488 1078 - 1291538 I e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M a score=2582.000000 s hg38.chr17_GL383563v3_alt 361484 10 + 375691 aaattttttt-- s panTro4.chr17 347241 10 + 82630442 Attttttttt-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 223317 10 + 73212453 Attttttttt-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 322978 12 - 81552678 aatttttttttt i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1052488 1078 - 1291538 I e chlSab2.chr16 227831 0 + 75148670 C e papAnu2.chr16 241082 0 + 74645514 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M a score=1638.000000 s hg38.chr17_GL383563v3_alt 361494 6 + 375691 tttttt s ponAbe2.chr17 223327 6 + 73212453 tttttt i ponAbe2.chr17 C 0 M 4693 s nomLeu3.chr19 322990 6 - 81552678 tttttt i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1052488 1078 - 1291538 I e chlSab2.chr16 227831 0 + 75148670 C e papAnu2.chr16 241082 0 + 74645514 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e panTro4.chr17 347251 0 + 82630442 C a score=21907.000000 s hg38.chr17_GL383563v3_alt 361500 277 + 375691 gagacagagtctcgctctttcacccaggctggagtgcagtggcacgatctcagctcactgcaagctccgccttccaggttcacgccattctcctgcctcagcctcccacgtagctgggactacaggtgcccacgaccatgccccgctaattttttgtattcttagtagagatgggatttcaccat-tta--caggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacagccgtgagccaccgcacccagc s nomLeu3.chr19 322996 280 - 81552678 gagacggagtctcactctgtcgcccaggctggagtgcagtggtgcgatctcggctcactacaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacacccggctaattttttgtattttcaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgccttggcctcccaaagtgctgggattacaggcgtgagccactgcgcccggc i nomLeu3.chr19 C 0 C 0 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1052488 1078 - 1291538 I e chlSab2.chr16 227831 0 + 75148670 C e papAnu2.chr16 241082 0 + 74645514 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=300.000000 s hg38.chr17_GL383563v3_alt 361777 1 + 375691 c s nomLeu3.chr19 323276 1 - 81552678 c i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1053566 1 - 1291538 c i calJac3.chrUn_GL286409 I 1078 C 0 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227831 0 + 75148670 C e papAnu2.chr16 241082 0 + 74645514 C e rheMac3.chr16 251748 148 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=4022.000000 s hg38.chr17_GL383563v3_alt 361778 12 + 375691 ctgccagaacac s nomLeu3.chr19 323277 12 - 81552678 atgccggaacac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251896 12 + 80904711 ctgccagaaaaa i rheMac3.chr16 I 148 C 0 s calJac3.chrUn_GL286409 1053567 12 - 1291538 ctgccaaaacaa i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 227831 0 + 75148670 C e papAnu2.chr16 241082 0 + 74645514 C e macFas5.chr16 257878 10545 + 80997621 M e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=150289.000000 s hg38.chr17_GL383563v3_alt 361790 142 + 375691 tattaacccattcaagagggctcagccctcatgacctagtcacctcgtatcaggctcttattgaacatgtccaccccctaccactgttacactgggattcagtt-gccagcacataagccttt-gggatacattcagac-------ATATT s nomLeu3.chr19 323289 142 - 81552678 tattaaccgattcaagagggctcggccctcatgacctagtcacctcgtatcaggctattattgaacatgtccaccccccaccactgttacactgggattcagtt-gccagcacataagccttt-gggatacattcaaac-------ATATC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 251908 142 + 80904711 cattaacccgttcaagagggctcggcccttgtgacccagtcgcctcgtatcaggctctaactgaacatgtccaccccccaccactgttacactgggattcagtt-gccagcacataagccttt-gggatacgttcagac-------ATACC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 241082 142 + 74645514 CATTAACCCGTTCAAGAGGGCTTGGCCCAGGTGACCCAGTTGCCTCGTATCAGGCTCTTACTGAACGTGTCCACCCCCCACCACTGCTACACTGGGATTCAGTT-GCCAGCACATAAGCCTTT-GGGATACGTTCAAAC-------ATACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227831 142 + 75148670 cattaacccattcaagagggctcggcccaggtgacccagttgcctcgtatcaggctcttactgaacatgtccaccccccaccactgttacactgggattcagtt-gccagcacataagccttt-gggatacgttcaaac-------ATACC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1053579 145 - 1291538 cattaatccattcgaaaaggctctgtcctcatgacagagtcacctctgctcaggctcttattgaccttgttcatcccccaccactgttgc------attcagttaaccaacacataagcctttggggacacattgaaaccctggcaGCCTC i calJac3.chrUn_GL286409 C 0 C 0 e mm10.chr11 75969535 51 + 122082543 I e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=318584.000000 s hg38.chr17_GL383563v3_alt 361932 285 + 375691 CACTGAGGTGGATAAGTGATAAGGACCTTCACTGCTCAACAGGAGCTGCCAGATACCCTTCAAGACTTTCCAAGAGGGAA-CCAAGCTGGTCCTTTG-------CCCCTCACTCCCTCC-------CCACTGATACCAGAGGACCGTATTCCTTGGGAGGGGAGCTACCCAGGCAACAGGTCAACAGGTTATGAGAAGACAAGTTTGTCTTTAACCCCACCTGTGTTTTCCCTTCACCCACA----CCCCCC----CCGACCCCAA-CCAGAAGATCCTTCCAAGAAATCAAGGCTGCCTGCAGGATGG s nomLeu3.chr19 323431 281 - 81552678 CActgaggtggataggtgataaggaccttcgcctctaaacagcagctgccagacacccttcaagactttccaagagggaa-acaagctggtcctttg-------cccctcactccctcc-------tcACTGATAGCAGAGGACTGTATTCCTTGGGAGGGGAGCTACCCAGGCAACAGGTCAACAGGTTATGAGAAGACAAGCTTGTCTTTAACCCCACCTGTGTTTCCCCCTT-----CA----CCGCCC----CCCACACCGACCCAGAAGATCCTTCCAAGAAATCAAGGCTGCCTGCAGGATGG i nomLeu3.chr19 C 0 I 359 s rheMac3.chr16 252050 278 + 80904711 CAC------GGataagtgataaggaccttcgcctctaaagaggagctgtcagacacccttcaagactttccaagagggaa-ccaagctggtcctttg-------cccctcac-ccctcc-------ccactgatagcagaggaCCATATTCCTTGGGAGGGGAGCTACCCAGGCAACAGGTCAATGGGTTATGAGAAGATAAGCTTGTCTTTAACGCCACCTGTGTTTCCCCCTT-----CA----CCCCCCCCCGCCCAACCCGACCCAGAAGATCCTTCCAAGAAATCGAGGCTGCCTGCAGGATGG i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 241224 282 + 74645514 CAC------GGATAGGTGATAAGGACCTTCGCCTCTAAAGAGGAGCTGTCAGACACCCTTCAAGACTTTCCAAGAGGGAA-CCAAGCTGGTCCTttg-------cccctcac-ccctcc-------ccactgATAGCAGAGGACCGTATTCCTTGGGAGGGGAGCTACCCAGGCAACAGGTCAATGGGTTATGAGAAGACAAACTTGTCTTTAACCCCACCTGTGTTTCCCCCTT-----CACCAccccccccccGCCCAACCCGACCCAGAAGATCCTTCCAAGAAATCAAGGCTGCCTGCAGGATGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 227973 275 + 75148670 CAC------TGATAGGTGATAAGGACTTTCACCTCTAAAGAGGAGCTGTCAGACACCCTTCAAGACTTTCCAAGAGGGAA-CCAAGCTGGTCCTTTG-------CCCCTCAC-CCCTCC-------CCACTGATAGCAGAGGACCGTATTCCTTGGGAGGGGAGCTACCCAGGCAACAGGTCAACGGGTTATGAGAAGACAAGCTTGTCTTTAACCCCACCTGTTTTTCCCCCTT-----CA----CCCCAAC---CCCACCCCGACCCAGAAGATCCTTCCAAGAAATCGAGGCTGCCGGCAGGATGG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1053724 273 - 1291538 CACTGAGATGAAGAGGCAACGAGGACCTTTGCCTCTAAAGAGGAGCTGCCAGACACCCTTCAAGACCTTCCAAGAGGGAATCCAAGCTGGTCCTTTG-------CCCCTCCC-----CC-------TCACTGATAGCAGA-CACCGTATTCCTTGGGAGGGGAGCTGCCCAGGTGATAGGTCAACAGGTTATGAGAAGACAAGCTTGTCTTTAACTCCATCTGTGTTTCCCCCTT-----CA----CAC-------CCCACCCCCACCCAGAAGACCCTTCCAAGAAATGGAGGCTGCCTGCAAGATGG i calJac3.chrUn_GL286409 C 0 C 0 s mm10.chr11 75969586 176 + 122082543 CAGTGAGATGGATAGATGATAAGGACCTTTGC----------------------------CAAGACTCCCTAAGAG---A-CCAAGCTGGTCCTTGGACCTTATCTCCCCAC-CCCACCGCCACTGCCAATGAGAGCTGCCATCTGAGCTCCTTGGGAGGG-------------------------AGTTATGAG---------------------------------------------CA---------------------------AACAGATTCTTCTAGGCCATCCAGGATGCCTGGAAGG--- i mm10.chr11 I 51 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=318601.000000 s hg38.chr17_GL383563v3_alt 362217 392 + 375691 CCCTCTCCCTCCCCAGAAGC---C----TGGCTGGCACTCCACAGCTCCAGGAGCAGAG-TGTGGGG------------------------------TCCTGGAGTTCGGGC---GCAGTAACCCTGAGcagggttactcagccacagcacgattgactttttcagccaggtattcctctggggggtgagggggctgtcctgtgtatggtacaatgtgtagcagcatccctggcctctaccccctaaatcatagt---ggcacacatccaaccccc-agctgtgacaa-taaaaaatgtcttcgggtgttgccaaatgtccccc-ggggTCACCCTCCCACC--------------CCCACCCCACCCCTTAACCCAAACCATGTGTCCAGAGCCTGTTACCTATTTCTAGCCTGGAGAATT----AGGGG-TGAGGAAACTGCTCTGTGCTTGCAGT s rheMac3.chr16 252328 393 + 80904711 GCCTCTTCCTCCCCAGAAGC---C----TGGCTGACACTCCGCAGCTCCAGGAGCAGAG-CGTGGGG------------------------------CCCTGGAGTTCGGGA---GCAGTAACCCTGAGcagggttactcagccacagcacaactgcctttttcagccaggtaatcctctggggggagacggggctgtcctgtgtatggtacgatgtttagcagcacccccggcctcta-cccctaaatcgtagt---ggcacacatccaaccccc-agttgtgaccattaaaaaatgtcttcaggcattgccaaatgtcccctgggggtcaCCCTCCCACC--------------CCCTCCCCACCCCTTAACCCAAACCATGTGCCCAGAGCCCATTGCCTATTTCTAGCCTAGAGAATT----AGGGG-TGGGGAAACTGCTCCGTGCTTGCAGT i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 241506 393 + 74645514 GCCTCTCCCTCCCCAGAAGC---C----TGGCTGACACTCCGCAGCTCCAGGAGCAGAG-TGTGGGG------------------------------CCCTGGAGTTCGGGA---GCAGTAACCCTGAGCAGGGTTACTCAGCCACAGCACAACTGACTTTTTCAGCCAGGTAATCCTCTGGGGGGAGACGGGGCTGTCCTGTGTATGGTacgatgtttagcagcatccctggcctctacccccTAAATCATAGT---GGCACACATCCAGCCCCC-Agttgtgacaa-taaaaaatgtcttcaggcattgccaaatgtcccctgggggtcaccctcccacc--------------ccctccccaccccttaacccAAACCATGTGCCCAGAGCCCGTTGCCCATTTCTAGCCTAGAGAATT----AGGGG-TGGGGAAACTGCTCCCTGCTTGCAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 228248 394 + 75148670 GCCTCTCCCTCCCCAGAAGC---C----TGGCTGACACTCCGCAGCTCCAGGAGCAGAG-TGTGGGG------------------------------TCCTGGAGTTCGGGA---GCAGTAACCCTGAGcagggtcactcagccacagcacaactgactctttcagccaggtaatcctctcgggggagacggggctgtgctgtgtatggtacgatgtttagcagcatccctggcctctacccgctaaatcgtagt---ggcacacatccagccccc-agttgtgaccattaaaaaatgtcttcagccattgccagatgtcccctgggggtcaCCCTCCCACC--------------CCCTCCCCACCCCTTAACCCAAACCATGTGCCCAGAGCCCGTTGCCTATTTCTAGCCTAGAGAATT----AGGGG-TGGGGAAACTGCTCCGTGCTTGCAGT i chlSab2.chr16 C 0 I 22 s calJac3.chrUn_GL286409 1053997 399 - 1291538 -CCTCTCTCTCCCGGGCAGCACGC----TGGCTAACA-GCCGTAGCTCCAGGAGCAGTG-TGTGGGG------------------------------CTCTGGAGTTTGGGA---GCAGGAGCCCTGAGCAGGG-CActcagccacagcacgactgacactttcagccaggtagg-ctctggtgggttcggggtctgtcctgtgtaccgcaggatatttagcagcatccctggcctcta-cccctaaatcctagt---agcacagatccaaccccc-agctgtgacaa-taataaatgtcttcaggcatggccaaatgtcccct-ggggTCACCCTCCCACCGCCACCCTCCCACACCCACCCCA-CCCTTAGCCCAAACCATGTGCCCTGAACCTAAT-----TCTCTAGCCTAGAGAATT----AGGGGAGGGGGAAACTGCTCAGTGCTCGCTGT i calJac3.chrUn_GL286409 C 0 I 2 s mm10.chr11 75969762 396 + 122082543 GCATCTCCCTGGCAGAATGT---CATTAGAACTGGCATCC-----CTGTAGAAGCAGAGTTATGGGGAGGTGATGTTTTTTGAGACTTTGGCCTCTATTCTGAAGCTTAGGACAGGCACAGAGGTAGAGCAGGGCCACTGGGCCACCACACTGTTGTCATTTTCAGCAA----------------------gggctattctgttcatcacgggttgtttagcagcctccctagcctttt-gtactaagtagtagtataaactcacttctgccactcgggttatgacaa-gagaaagtgcctccaaacattgttaaatgtcctctggaagtcaCCTTCCTCTC--------------ACACCAATACCCCTCCTCCCA------GTG---AGAACCAAGAGCCACTTTCCAGCCTAGCAGATTATGAAAGGG-AAGGGAATCCA------GCTTGCAGT i mm10.chr11 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=743.000000 s hg38.chr17_GL383563v3_alt 362609 41 + 375691 ---AGTGCGGCAAAACTGCGTAGAGATGGAGCAGGCCT-CCTTCC s rheMac3.chr16 252721 39 + 80904711 ---GG---GGCAAAACTgggtagaggcagagcaggtctgccttcc i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 241899 27 + 74645514 ---GG---GGCAAAACTGGGTAGAGGCAGAGCA------------ i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1054398 18 - 1291538 ---TG---GGCTAAGATGGGGAGG--------------------- i calJac3.chrUn_GL286409 I 2 C 0 s mm10.chr11 75970158 40 + 122082543 AGCAA---GGCAGAGCAGTGTGGGAG-AGGGCAGGACTATCTCC- i mm10.chr11 C 0 N 0 e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 228642 22 + 75148670 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=291.000000 s hg38.chr17_GL383563v3_alt 362650 3 + 375691 CAC s rheMac3.chr16 252760 3 + 80904711 cac i rheMac3.chr16 C 0 I 5 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1054416 0 - 1291538 C e chlSab2.chr16 228642 22 + 75148670 I e papAnu2.chr16 241926 0 + 74645514 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=-132.000000 s hg38.chr17_GL383563v3_alt 362653 13 + 375691 TGTTGACCAGACG s calJac3.chrUn_GL286409 1054416 4 - 1291538 ---------GGCA i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 228642 22 + 75148670 I e papAnu2.chr16 241926 0 + 74645514 C e rheMac3.chr16 252763 5 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=9934.000000 s hg38.chr17_GL383563v3_alt 362666 32 + 375691 GAGCGGGCCCGCCTTCCCACCCTCTGACCAGG s papAnu2.chr16 241926 27 + 74645514 -----GGCCCGCCTTCCCACCCTTGGACCAAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 228664 25 + 75148670 GAGCAGGCCCGCCTTCCCACCCTTG------- i chlSab2.chr16 I 22 C 0 s calJac3.chrUn_GL286409 1054420 32 - 1291538 GAGCAGGCCTGCCTTCCCACCCTTTCTCCAGG i calJac3.chrUn_GL286409 C 0 I 29 e canFam3.chr9 15803335 14388 - 61074082 I e rheMac3.chr16 252763 5 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=-2584.000000 s hg38.chr17_GL383563v3_alt 362698 90 + 375691 CGGAGCGGCCCCGCTTCCCACTCTTGACCAGGCGGAGCGGCCCCCCTTCCCACTCTTGACCAggcggagcaggcctccttcccactgtct s papAnu2.chr16 241953 11 + 74645514 GGA---------GTTTCCCA---------------------------------------------------------------------- i papAnu2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1054452 29 - 1291538 I e chlSab2.chr16 228689 0 + 75148670 C e rheMac3.chr16 252763 5 + 80904711 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=7859.000000 s hg38.chr17_GL383563v3_alt 362788 26 + 375691 gaccaggagagtttcccaaaagccaa s rheMac3.chr16 252768 26 + 80904711 gaccaggggagtttcccaaaagccaa i rheMac3.chr16 I 5 C 0 s papAnu2.chr16 241964 8 + 74645514 ------------------AAAGCCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 228689 26 + 75148670 GACCAGGGGAGTTTCCCAAAAGCCAA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1054452 29 - 1291538 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=626410.000000 s hg38.chr17_GL383563v3_alt 362814 896 + 375691 gtagaaactggaagaaagcgggggtcaagcagccttgaagaagccccgggggcaagggaacccgtcaccagaggctgagatgcgcctctgg-----------agaGGATCAAGAGGCCGGCCTGAGGATGTATTACAAACGGGCTCCCGGGAAATCCTCCGATGCCCAGATCTGGAGAGGATCAaagcagaaggatgacggagaaagagaagagaGCCCTCCTTCCACCTGCCAGCACCTGCACTGCAGGGAAGAGGGGGGGGTGGAATTGGAAAAAAG-AATGAAAGTTGGATTTAggtcgggcacagtggctcacgcctgtgatcccagcactttgggaagccaaagcaggaagctcaaagctcacttgagcccaaggaatttgagaccagcctgggccacatggcgagcgccgtgtctctactaaaaataaaaaaattagcagggtgtggtggtgcgtgcctgtactcccagctacggaggccgggcaggttgaggggctgaggtaggaggatcgcttgaacctggcgggtgg-agttgcagtgagccttgattgcgacactgcactccatcctgggggacacagcagaccttgtctcagaaaaa----------------------------------------------------------------------------------------------aaaaggaaagaaaCTCGGATTTATAGATCTAGtaggttgaatgatggcctgaaaaatatatgtccacatcctaattcccagaacctgtgactgtgactttatttggtaaaagggtctttgcagacataattaaattgaggctgtcatgatgagatcatcctggacatttcgtaggccctaaatccagtgacaagcatcattataagatgtacgtagagactagaaggcggccctaggaagatgga---ggcagagattggagtgatgcagccacacgcccagggacacctggggcccccagaaa s rheMac3.chr16 252794 888 + 80904711 gtagaaactggaagaaagcggggttcaagc-----------AGCATCGGGGGCGAGGGAACCCATCACCAGAGGCTGAGGTGCTCCTCGGG-----------AGTGGATCAAGAGGCCAGTCCGAGGATGTGTTACGACGGGGCTCCTGGGAAACCCTCAGATGCCCACATCTGGAGGGGATCAAAGCAGAAGGATGAGGGAGAAAGAGAAGAGAGCCCTCCTTCCACGTGCCAGCATCTGAGCTGCAGGAAGG-GGAGGGGGTGGCATTGGAAAAAAAGAATGAAAGTTGCGTTTAggttgggcacagtggctcacgcctgtcgtcccagcactttgggaagccaaagcagggagctcaaagctcacttgagccc-aggagtttgagaccagcctgggcaacaggctgagacccctgtctctactaaaaattaaaaaattagcagggtgtggtggtacgtgcctatactcccagctacaggggccagggaggttgggggactgagttaggaggatggctcgaacctggcaggtggaagtctcagggaaccttgatcgtg-----acactccagcctgggggacacagcagaccttgtctcaaaaaaaaaaaaaaa--------------------------------------------------------------------------------------aaaaggaaagaaaCTTGGATTCATAGATCtagtaggttgaacgacagcctgaaaaatatatgtccacatcctaactcccagagcctgtgactgtgacttcatttggaaaaagggtctttgcacacataattaaatcgcggctgtcatgatgagatcatcctggacgtctagccagcccgaaatccagtgacaagcatcattacaagatgtacatagagactagaaggcggccctgggaagatgga---ggcagagattggagtgatgcagccacaaacccaaggacacctggagcctccagaaa i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 241972 897 + 74645514 GTAGAAACTGGAAGAAAGCGGGGTTCAAGC-----------AGCGCCGGGGGCAAGGGAACCCATCACCAGAGGCTGAGGTGCTCCTCGGG-----------AGTGGATCAAGAGGCCAGTCCGAGGATGTGTTACGACGGGGCTCCTGGGAAACCCTCAGATGCCCACATCTGGAGGGGATCAAAGCAGAAGgatgagggagaaagagaagagagccCTCCTTCCACCTGCCAGCGTCTGAGCTGCAGGGAAG-GGAGGTGGTGGcattggaaaaaaagaatgaaagttgggtttaggttgggcacagtggctcacgcctgtcgtcccagcactttgggaagccaaagcagggaGCTCaaagctcacttgagccc-aggagtttgagaccagcctgggcaacatggtgagaccc--gtctctactaaaaataaaaaaattagcagggtgtggtggtatgtgcctgtactcccagctatggGGGCCGGGCAGGTTGGGgggctgagttaggaggatcgcttgaacctggcaggtggaagtttcagtgaacCTTGATCgtgacactacactccagcctgggagacacagtagaccttgtctccaaaaaaaaaaaaaaagga--------------------------------------------------------------------------------ggaggaggaaagaaacttGGATTCATAGATCTTGTAGGTTGAACGATGGCCTGAAAAATATGTGTCCACATCCTAACTCCCAGAGCCTGTgactgtgactttatttggaaaaagggtctttgcagacatAATTAAATCGCGGCTGTCatgatgagatcatcctggacatCTAGCCAGCCCGAAATCCAGTGACAAGCATCATCACAAGATGTACACAGAGACTAGAAGGCGGCCCtgggaagatgga---ggcagagatgggagtgagGCAGCCACAAACCCAAGGAcacctggagcctccagaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 228715 881 + 75148670 GTAGAAACGAGAAGAAAGTGGGGTTCAAGC-----------AGTGCCGGGGGCAAGGGAACTCATCACCAGAGGTTGAGGTGCTCCTCGGG-----------AGAGGATCAAGAGGCCAGCCCGAGGATGTGTTACAACGGGGTTCCTGGGAAACCCTCAGATGCCCACATCTGGAAGGGATCAAAGCAGAAGGATGAGGGAGAAAGAGAAGAGAGCCCTCCTTCCACCTGCCAGCGTCTGAGCTGCAGGGAAG-GGAGGGGGTGGAATTGGGAAAAAA-AATGAAAGTTGGGTTTCggttgggcacggtggctcacacttgtcgtcccagcactttgagaagccaaagcaaagagctcaaagctcacttgagccc-aggagtttgagaccagcctgggcaacatggtgagaccc--gtctctactaaaaataaaaacattaacagggtgtggtggtgcgtgcctgtactcccagctacgggggctgggcaggttgggaggctgagttaggaggatcgctcgaacctggcaggtggaagtttcagtgaaccttgatcatg-----acactccagcctgggggacacagcagatcttgtcttaaaaaaaaaaa------------------------------------------------------------------------------------------agaaggaaagaaaCTTGGATTCATAGATCTAGtaggttgaacgatggcctgaaaaatatatgtccacatcctaactcccagagcctgtgactgtgactttatttggaaaaagggtctttgcagacataattaaatcgcggctgtcatgatgagatcatcctggacctctagccggcctgaaatccaatgacaagcatcattgtaagatgtacatagagactagaaggcggccctgggaagatgga---ggcagagattggagtgatgcagccacaaacccaaggacacctggagcctccagaag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1054481 969 - 1291538 ----------GTAGAAAGCAGAGTTCAGGAAGCCGTAAACAGACACCGGGGGCAAGGGAACCCACCAGTAGAGGCTGAGATGCACCTCTGGACCAGACACTCAGTGGATC-AGTGGTCGG-CTGAGGGTGTATTACAAAGGCTCTCCTGGGAAACCCTCCAAGGCCCACATCTTGAGAGGATCAAAGCCGAAGGATGAAG--GACAGAGAAGAGAGCCCTCCTTCCACCTGCCAGCACCTGTGCTGCAGGGAAT-GGAGAGGGTGGAATTGGAAAAAAG-AACGAAAGTTGGATTTAGATCCggcacagtggctcacgcttgtaatcccagcactttgagaagccaaagcaggaagctcaaagctctcgtgagtcc-atgcatttgagaccagcctggacaacatgctgagacccctgtctctaccaaaaataaaaacgttagcagggtgtggtggtgcatgcctgtactcct--------gggccgggcaggctg-ggggctgaggtgggaagatcgcttgaacttgggacgtggaagctgcagtgagccttgattgtgacactccactgcagcctgggggacacagcagaatttggctcaggaaaaaaaaaggaaagaaggaaaaagagagagaaagaaaaaaagagagaaaaagaaaatgtgttaagtggagatagagaaagatggaagggaaggagggagagagaaagTAAGTCGGATTTATACACCTCgtacgttgaatgatggcctgaaaaatacatgcccacatcctaactctcagagcctgtgactgtgcctttatttgg--aaagggtctttgcagatataattgaa-----gctctcatgatgagctcatcctggacatctagcaggccctaaatcca-tggcatgcatcgttgtaagatgta--tagagattagaaggtggccctgggaagatggatgtagcagggattggagtgacgcagctacaagccca-ggacacctggagcccccaggaa i calJac3.chrUn_GL286409 I 29 I 126 e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=1000.000000 s hg38.chr17_GL383563v3_alt 363710 1 + 375691 c s rheMac3.chr16 253682 1 + 80904711 c i rheMac3.chr16 C 0 I 748 s papAnu2.chr16 242869 1 + 74645514 c i papAnu2.chr16 C 0 I 197 s chlSab2.chr16 229596 1 + 75148670 c i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1055576 1 - 1291538 c i calJac3.chrUn_GL286409 I 126 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=12707.000000 s hg38.chr17_GL383563v3_alt 363711 20 + 375691 gggaggaaggaaggacggat s rheMac3.chr16 254431 20 + 80904711 gggagggaggaaggactgat i rheMac3.chr16 I 748 C 0 s papAnu2.chr16 243067 20 + 74645514 gggagggaggaaggattgat i papAnu2.chr16 I 197 C 0 s chlSab2.chr16 229597 20 + 75148670 cggagaaaggaaggaaggat i chlSab2.chr16 C 0 I 1005 s calJac3.chrUn_GL286409 1055577 20 - 1291538 tggaggaagaaaggaagggt i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=144969.000000 s hg38.chr17_GL383563v3_alt 363731 214 + 375691 tctcccctgcagcctccagagggaggaccaccctgctgacaccttgatttcagccttccggccgccgg-actgtgaaataatacatccattttgttttaagtcagccagtttgtggtaatttactagg---gcagccccaggaaacaaatgcaACAGGAGACTAGAATTTGCTC--GAGTGGAGACAGTCTTCAGCAAAGTCTACTTTTCATTCTGACAC s rheMac3.chr16 254451 214 + 80904711 tctcccctggagcctccagagggg-caccaccctgctggcaccttgatttcaggcttccagctgccag-actgtgaaagcacacacctagtttgttttaagtcagccagtttgtggtgatt-actagg---gcagccccaggaaatgaatgcaACAGGAAACTAGAATTTGGTCCACAGTGGAGACAGTCTTCAGCAGAGTCTACTTTTCATTCTGACAC i rheMac3.chr16 C 0 I 5 s papAnu2.chr16 243087 193 + 74645514 tctcccctggagcctccggAGGGG-CACCACCCCGCTGGCACCTCGATTTCAGGCTTCCGGCTGCCAG-ACTGTGAAAGCACACACCTAG-----TTTAAGTCAGCCAGTTTG-GGTGATTGACTAGG---GCAGCCCCAGGAAATG----------------AGAATTTGGTCCAGAGTGGAGACAGTCTTCAGCAGAGTCTACTTTTCATTCTGacac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 230622 215 + 75148670 tctcccctggagcctccaaaggggacaccaccctgctggcacctcgatttcaggcttccggctgccag-gctgtgaaagcacacacctagtttgttttaagtcagccagttgg-ggtgattgactagg---gcagccccaggaaacgaatgcaACAGGAAACTAGAATTTGGTCCAGAGTAGAGACAGTCTTCAGCAGAGTCTACTTTTCATTCTGACAC i chlSab2.chr16 I 1005 C 0 s calJac3.chrUn_GL286409 1055597 220 - 1291538 gctcccctggagtctccagtgggtgcaccgctctgctgacaccttgatttcagcattctggctgccagaactgtgaaagaatacatttattttgttttaaatcaaccagtttgtagtaatttactagggcagcagccccaggaaaGGAAGGCAATAGGAAGCTAGAATTTGCTCTAGAGTGGAGACAGTCTTCAACAGACTCTACTTTTCATTCTGACAC i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 347251 0 + 82630442 C a score=2838.000000 s hg38.chr17_GL383563v3_alt 363945 5 + 375691 ttttt s panTro4.chr17 347251 5 + 82630442 ttttt i panTro4.chr17 C 0 C 0 s rheMac3.chr16 254670 5 + 80904711 ttttt i rheMac3.chr16 I 5 C 0 s chlSab2.chr16 230837 5 + 75148670 TAttt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1055817 5 - 1291538 tttat i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e papAnu2.chr16 243280 0 + 74645514 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=51663.000000 s hg38.chr17_GL383563v3_alt 363950 120 + 375691 ------------------tttgagacagagtctcgctc-tgttgcccaggccgaagtgcagtgacgcgatctcggctcactgcaacctctgcctcccgggttcaagtcattctcctgtctcagcctcctgagtagctgg s panTro4.chr17 347256 120 + 82630442 ------------------tttgagacggagtctcgctc-tttcacccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgccttccaggttcacgccattctcctgcctcagcctcccatgtagctgg i panTro4.chr17 C 0 C 0 s rheMac3.chr16 254675 120 + 80904711 ------------------tttgagacagagtctggctc-tgtcacccaggctggagtgcagtggtgcaatctcggctcactgcaacctccgcctcccgggttccagtgattctcctgcctcagcctcccgagtagctgg i rheMac3.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1055822 139 - 1291538 ttatttatttatttattttgtgagatggagtttcactcttgttacccaggctggagtgcaatggagcgatcttggctcactgcaacctctgccccccgggttcaagtgattctcttgcctcagcctcccaagtagctgg i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 230842 0 + 75148670 C e papAnu2.chr16 243280 0 + 74645514 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=31352.000000 s hg38.chr17_GL383563v3_alt 364070 163 + 375691 gactacaggcgcatgacaccacgtccggctagttttttgtatttttagtagagatggggtttcaccatgttagccaggatggtcttgatctcctgacctc--gtgatctgcccgcctcggcctcccaaagtgatgggattacaggcgtgagcccccacacccggc s panTro4.chr17 347376 160 + 82630442 gactacaggtgcccgtcaccatgcccggctaattttttgtatttttagtagagacgggatttcaccat-tta--caggatggtctcgatctcctgacctc--gtgatccgcccgcctcggcctcccagagtgctgggattacaggcgtgagccaccgcacccggc i panTro4.chr17 C 0 C 0 s calJac3.chrUn_GL286409 1055961 163 - 1291538 gattacaagcacatgccactatgcctggctaa-tttttgta-ttttaatagagacggggttttgctatgttggccaggctggtcttgaactcctggcctcaagtgatctacccgcctctgcttcccaaagtgctgggactacaggcatgagccaccatacctggc i calJac3.chrUn_GL286409 C 0 I 760 e canFam3.chr9 15803335 14388 - 61074082 I e chlSab2.chr16 230842 0 + 75148670 C e papAnu2.chr16 243280 0 + 74645514 C e rheMac3.chr16 254795 0 + 80904711 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=5859.000000 s hg38.chr17_GL383563v3_alt 364233 63 + 375691 tgttttgtgtgttttaaactttacataaatggtatcatactgtatgttttgttttattttgtt s panTro4.chr17 347536 63 + 82630442 tgttttgtgtgttttaaactttacataaatggtatcatactgtatgttttgttttattttgtt i panTro4.chr17 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e chlSab2.chr16 230842 0 + 75148670 C e papAnu2.chr16 243280 0 + 74645514 C e rheMac3.chr16 254795 0 + 80904711 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=932.000000 s hg38.chr17_GL383563v3_alt 364296 8 + 375691 ttcttttg s panTro4.chr17 347599 8 + 82630442 ttgttttg i panTro4.chr17 C 0 C 0 s papAnu2.chr16 243280 8 + 74645514 ttctattt i papAnu2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e chlSab2.chr16 230842 0 + 75148670 C e rheMac3.chr16 254795 0 + 80904711 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=56647.000000 s hg38.chr17_GL383563v3_alt 364304 122 + 375691 tttttaagacagggtctcactctgttacccaggctggagtgcagtggtgtgatctcagctcactgcagccttgacctcctgggctcaagcgatcctcccacctcagcctcctgattagctga s panTro4.chr17 347607 122 + 82630442 tttttaagacagggtctcactctgttacccaggctggagtgcagtggtgtgatctcagctcactgcagccttgacgtcctgggctcaagcaatcctcccacctcagcctcctgattagctga i panTro4.chr17 C 0 C 0 s papAnu2.chr16 243288 122 + 74645514 tttttgagacagggtctcgctctgtcacccaggctggagtgcagtggtgtgatctcggctcactgcaacctccgcctcccgggttccagtgattctcctgcctcagcctcctgaatagctga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 230842 122 + 75148670 tttttgagacagagtctggctctgtcacccaggctggagtgcagtggtgccatctcggctcactgcaacctccgcctccccggtttaagtgattctcctgcctcagcctcctgagtagctgg i chlSab2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e rheMac3.chr16 254795 0 + 80904711 C e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=981829.000000 s hg38.chr17_GL383563v3_alt 364426 1223 + 375691 gactacaagcacgtaccact----acacccggctggtctcaaactcctgagctcaagtgacctgcctgcctcggcctcacaaactgttgggattacaggcgtgagccaccatgcccagtcatgctgcatgcttttaaaaattgaggcaaaattcatataacatacaattaaccattctaacatgtatcattcagagcattcgcaatgttatccaaccaccacctctctctagtttcaaaacgtttttcaatcaccccataagaaTTTtgatggttaattttgagtgtaagtttgactggataagggatgcccaggtggctagttaggcattatttgggggtgtgtctgagagggtgtttctggaaag-gatttgcgtttgaatcgtggactgag-------tgaaggtcaccctcaccaatgtgagtgggcacatcatccagtcaggtagggacac----agcaaaaaggaggggaaggatgaacttgctctctggtcttgagctggggcatccaccctctcctgtcctcgaacagtgaaactcctggttctctggcttttggactgaattctgtcactggctctctggttctccagctggcaggtggcagattgtgatacttctcagccctcgtaatcgtgtaagccaattcccgtaataaacctccACATACAAGGAAGATAATATAAGAACATTCTTTTTCTCTGAGCACTGTCGAC-GGGGGTGGGGCaagaatattgtatgtccatgaaatagtcactcccaatgtcgccctccctgcaactcctgcaaccgttaacccgccttctgtctccatggatttgcccattTGTATTCTTCCAAAACTTACAGGATTCTGGCTGCACATTCGAGGGATTTGTACGGGTGGTCACGTTAGACCATTGTT----TGTTTTTCATTGCCATATAATATTCCATCATGAAACTCAACCA-Ctttttttttttttttcttgagagagggtctcattctgtcaccaggctgcagtgcagtggtgcatcctggctcactgcagcctagaaatcccaggcttaagtgatcctccggcctcagcttcctgagtagctgggactgtgggt--gcaccaccacacctggctaatttttT-------AAAAAAATTAggccaggcatggtggctcaggcctgtaatcccagcacttcgggaggccgaggtgggcagatcatgaggtcaggagttcgagaccaacctgatcaacatggtgaaaccc- s panTro4.chr17 347729 1226 + 82630442 gactacaagcatgtaccactcactacacccggctggtctcaaactcctgagctcaagtgacctgcctgcctcggcctcacaaactgttgggattacaggcgtgagccaccatgcccagtcATGCTGTATGTttttaaaaattgaggcagaattcatataacatacaattaaccattctaatgtgtttcattcagagcattcgcaatgttatccaaccaccacctctctctagtttcaaaacgtttctcaatcaccccataagaaTTTtgatggttaattttgcgtgtaagtttgactggataagggatgcccaggtggctagttaggcattgtttgggggtgtgtctgagagggtgtttctggaaagagatttgcgtttgaatcgtggactgag-------tgaaggtcaccctcaccaatgtgagtgg-cacatcatccagtcatgtagggacac----agcaaaaaggaggggaaggatgaacttgctctctggtcttgagctggggcatccaccctctcctgtcctcggacagtggaactcctggttctctggcttttggactgaattctgtcactggttctctggttctccagctggcaggtggcagattgtgacacttctcagccctcgtaagcatgtaagccaattcccataataaacctcCACATACAAGGAAGATAATATAAGAACATTCTTTTACTCTGAGCACTGTCGAC-AGGGGTGGGGCAAGAATATGGtatgtccgtgaaataatcactcccagtgtcaccctccctgcaactcctgcaactgttaacccaccttctgtctccatggatttgcccattTGTATTCTTCCAAAACTTACAGGATTCTGGCTGCACATTCGAGGGATTTGTACAGGTGGTCACGTAAGACCATTGTT----TGTTTTTCATTGCCATGTAATATTCCATCATGAAACTCAACCA-Ctttttttttttttctcttgagagagggtctcattctgtcaccaggctgccgtgcagtggtgcatcctggctcactgcagcctagaaatcccgggcttaagtgatcctccggcctcagcttcctgagtagctgggactgtgggt--gcaccaccacacctggctaatttttT--------AAAAAATTAggccaggcacagtggctcacgcctgtaatcccagcacttcgggaggccgaggtgggcagatcatgaggtcaggagttcgagaccaacctgatcaacatggtgaaaccc- i panTro4.chr17 C 0 M 791 s rheMac3.chr16 254795 1231 + 80904711 gactacaagcatgtaccact----gcacctggctggtcccaaactcctgagctcaagtgacccgcctgcctcagactggcaaactgttgggattacaggcgtgagccaccgtgcccagtcATGCTGTATGCttttaaaaattgaggcaaaattcacataatatacaattaacgattctgaagtgtaccatttagagcattcgcaatgttatgcaaccaccacctctgtctagtttcaaaatgttt-tcaatcaccccgtaagaaCtgtgatggttaattttgtgtgtaaatttgatgggataagggatgcccaggtgtctcgttaggcattatttgggggtgtgtctgagacggtgtttctggaaagagattcgcgtttgaatcgtggactgag-------tggaggtcgccctcaccgatgtgagtgggcacatcatccagtcatgtggggacacacagagcaaaaaggagggagtggatgaacttcctttctgttcttgagctgggacatccaccttctcctgtcttcagacagtggaattcctggttctctgacttttggactgaattctaccactggctctccagttctccagctggcaggtggcagattgtggtacttctcagccctcatgatcatgtaagccaatttccgtaataaacctccacatacaAGGAAGATCATATAAGAACATTCGTTTTCTCTGAGCACTATTGATGGGGGGTGGGGCGAGAATATCGGATGTccatgaaataatcactcccagtgtcgccctccctgcagctcctgcaaccactaagctgccttctgtct-catggatttgcccattTGTATTCTTCCAAAACTTACAGGATTTTTGCTGCACATTTGAGAGATTTGTACATGTGGTCACGTTAGACCACCGTT--TGTGTTTTTCTTTGCCACATAATATTCCATCGTGAAACTCAACCACCtttttttttttt--tcttgagagagggtctcaatctgtcaccaggctgggaggcagtggtgggtcatggctcactgcagtctagaactcccaggcttaagtgatcctccagctccagccttctgagtagctgggactgtgggt--gaaccaccgcacctggctaatt-----aaaaaaaaaaaaattaggccaggcacggaggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcatgaggtcaggagtttgagaccagcctgacccacgtggtgaaacgct i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 243410 1237 + 74645514 gactacaagcatgtaccact----gcacctggctggtcccaaactcctgagctcaagtgacctgcctgcctcggactggcaaactgttgggattacaggcgtgagccactgtgcccagtcatgctgtatgcttttaaaaattgaggcaAAATTCACATAATATACAATTAACCAT--TAAAGTGTACCATTTAGAGCATTCGCAATCTTATGCAACCACCACCTCTCTCtagtttcaaaatgttt-tcaatcACCCCGTAagaattgtgatggttaattttgtgtataAATTTGATGGGATAAGGGATGCCCAGGTGTCTCGTTAGGCATTATTTGGGGGTGTGTCTGAGAGGGTGTTTCTGGAAAGAGATTCGCGTTTGAATCGTGGACTGAGTGGAGGTTGGAGGTCGCCCTCACCGATGTGAGTGGGCACATCATCCAGTCATGTAGGGACACACAGAGcaaaaaggagggaagggatgAACTTCCTCTCTGgtcttgagctgggacatccaccTTCTCCTGTCTTCAGACAGTGGAATTCCTGGTTCTCTGACTTTTGGACTGAATTCTACCACTGGCTCTCCGGTTCTCCAGCTGGCAGGTGGCAGATTGTGGTACTTCTCAGCGCTCataatcatgtaagccaattTCCGTAATAAACCTCCACATACAAGGAAGATAATATAAGAACATTCGTTTTCTCTGAGCACTATTGATGGGGGGTGGGGCGAGAATATCGGATGTCCATGAAATAATCACTCCCAGTGTCGCCCTCCTTGCAGCTCCTGCAACCACTAACCTGCCT----TCT-CATGGATTTGTCCATTTGTATTCTTCCAAAACTTACAGGATTTTTGCTGCACATTTGAGAGATTTGTACATGTGGTCACGTTAGACCACCGTTTGTGTGTTTTTCATTGCCACATAATATTCCATCATGAAActcaacca-ctttttttttttt--tcttgagagagggtctcattctgtcaccaggctgggaggcagtggtggatcatggctcaccgcagcctagAACTCCCacacttaagtgatcctccagcttcagccttctgagtagctgggactgtaggtgcgcaccaccgcacctggctaatt---aaaaaaaaaaaaaaattaggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcatgaggtcaggagtttgagaccagcctgacccacgtggtgaaacgct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 230964 1235 + 75148670 gactacaa-catgtaccact----acacctggctggtcccaaactcctgagctcaaatgacctgcctgcctcggactggcaaactgttgggattacagacgtgagccaccgtgcccagtcATGCTGTATGCttttaaaaactgaggtaaaattcacatgatatacaattaaccattctaaagtgtaccattgagagcattcgcaatgttatgcaaccaccacctctctctagtttcaaagtgttt-tcagtcacgccgtaagaaTtgtgatggttaattttgtgtgtaaatttgatgggataagggatgcccaggtgtctcgttagccattatttgggggtgtgtctcagagggtgtttccggaaagagattcgcgtttgaatcatggactgag-------tggaggttgccctcaccgatgtgagtgggcacaccatccagtcatgtggggacacacagagcaaaaaggagggaatggatgaacttcctctctggtcttgagctgggacatccaccttctcctgtcttcagacagtggaattcctggttctctgacttttggactgaattctaccactggctctccggttctccagctgg-aggtggcagatggtggtacttctcagccctcataatcatggaagccaatttccgtaataaacctccACACACAAGGAAGATAATATAAGAACATTCGTTTTCTCTGAGCACTATTGATGGGGGGTGGGGTGAGAATATCGGATGTccatgaaataatcactcccagggtcaccctccctgcagctcctgcaaccactaacctgccttctgtct-catggatttgcccatctgtattcttcCAAAACTTACAGGATTTTTGCTGCACATTTGAGAGGTTTGTACATGTGGTCACGTTAGACCACCGTTTGTGTGTTTTTCCTTGCCACATAATATTCCATCATGAAACTCAACCA-Ctttttttttttt--tcttgggagagggtctcattctgtcaccaggctgggaggcagtggtgcatcatggctcaccgcagcctagaactcccaggcttaagtgatcctccagctccagccttctgagtagctgggactgtgggt--gcaccaccgcacctggctaattaaaaaaaaaaaaaaaaaattaggccaggcacggaggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcatgaggtcaggagtttgagaccagcctgaccaacatggtgaaatgcc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=173277.000000 s hg38.chr17_GL383563v3_alt 365649 338 + 375691 gtctctaccaaaaataccaaaattagcaacatgatggcacgcacctgtaatccctgctactgaggaggctgaggcaggagaatcacttgaacccaggaggaggaggtcacagtgag--------------------------ctgGGCAACAGAATGAGACTCTCTC----------------TCAAAGAAAAAAAAAAAAAAtttggagagatagggtcttcctatgttgcccaggctggtcttgaactcttggccttgagtgatcctcctgcctcagcctcccaaagtgctgggattacaagtgtaagccaccacaccAGAACTCAACCCCAttttttttagacaggttctcgctctgtcacccaggctggagtacaa s rheMac3.chr16 256026 377 + 80904711 gtctctactaaaaataccaaaattagcagcatgatggcccgcatctgtaatccctgctactcaggaggttgaggcaggagaattgtttgaacccaggaggcggaggttgcatcgagttgagattgcaccactgcactccagcctgggcaacagaatgagactccctctcaatcaatcaatcaatcaatcaaacaaAATAAAAAtttggagagacagggtctccctatgttgcccaggctggtcttgaactcttggccttgagtgatcctcctgcctcagcttcccaaag---tgggattacaagtataagccaccacgcctggccTCAACCCCAttttttttagacaggttctcactctgtcacccaggctggagtgcaa i rheMac3.chr16 C 0 M 157 s papAnu2.chr16 244647 373 + 74645514 gtctctactaaaaataccaaaattagcagCATGATGACccgcatctgtaatccctgctactcaggaggttgaggcaggagaattgcttgaacccaggagatggaggttgcagccagttgagattgcaccactgcactccagcctgggcaacagaatgagactccctc----tcaatcaatcaatcaatcaaacaaaataaaaatttggagagacagggtctccctatgttgcgcaggctggtcttgaactcttggccttgagtgatcctcctgcctcagcctcccaaag---tgggattacaagtaaaagccaccacgcctggcctcaaccccattttttttagacaggttctcactctgtcacccaggctggagtgcaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 232199 373 + 75148670 gtctctactaaaaataccaaaattaacagcatgatggcccgcatctgtaatccctgctactcaggaggttgaggcaggagaattgtttgaacccaggaggcggaggttgcagtgagttgagatcgcatcactgcactccagcctgggcaacagaatgagactccctc----tcaatcagtcagtcaatcaaacagaataaaaatttggagggatagggtctccctatgtggcccaggctggtctcgaactcttggccttgagtgatcctcctgcctcagcctcccaaag---tgggattacaagtataagccaccacgcctggccTCAACCCCAtttattttagacaggttctcgctctgtcacccaggctggagtgcaa i chlSab2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 348955 791 + 82630442 M a score=35517.000000 s hg38.chr17_GL383563v3_alt 365987 143 + 375691 cggcacaaccttggctcactgcaacctccgcctcctgggttcaagcaattctcatgcctcaacctcccaagaagctgtgactacaggcgggagccaccataccagtctaatttttgtatttttagtagagacagcatatcact s papAnu2.chr16 245020 143 + 74645514 cggcacaacctcggctcactgcaacctctgcctcctgggttcaagcgattctcatgcctcagcctcccaaggagctgggactacaagcgtgagccaccacaccagtctaatttttgtatttttagtagagacgaggtttcacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 232572 143 + 75148670 cggcacaacctcggctcactgcaacctctgcctcccgggttcaagcaattctcatgcctcagcctctcaaggagttgggactacaggcgtgagccatcacaccagtctaatttttgtatttttagtagagacgaggtttcacc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e rheMac3.chr16 256403 157 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M e panTro4.chr17 348955 791 + 82630442 M a score=12114.000000 s hg38.chr17_GL383563v3_alt 366130 21 + 375691 atgttggccaggctggtctca s panTro4.chr17 349746 21 + 82630442 atgttggccaggctggtctca i panTro4.chr17 M 791 C 0 s papAnu2.chr16 245163 21 + 74645514 atgttggccaggctggtctca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 232715 21 + 75148670 atgttggccaggctggtctca i chlSab2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e rheMac3.chr16 256403 157 + 80904711 M e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=30779.000000 s hg38.chr17_GL383563v3_alt 366151 35 + 375691 aactcccgacctcagatgatccgcccgcctcagcc s panTro4.chr17 349767 35 + 82630442 aactcccgacctcagatgatccgcccgcctcagcc i panTro4.chr17 C 0 C 0 s rheMac3.chr16 256560 35 + 80904711 aactcccaacctcaggtgatccgcccgcctcaggc i rheMac3.chr16 M 157 C 0 s papAnu2.chr16 245184 35 + 74645514 aactcccgacctcaggtgacccgcctgcctcagcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 232736 35 + 75148670 aactcccgacctcaggtgatccgcccgcctcagcc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e calJac3.chrUn_GL286409 1056124 760 - 1291538 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=27098.000000 s hg38.chr17_GL383563v3_alt 366186 24 + 375691 tctcaaggtgctgggattacaggc s panTro4.chr17 349802 24 + 82630442 tctcaaggtgctgggattacaggc i panTro4.chr17 C 0 C 0 s rheMac3.chr16 256595 24 + 80904711 tctcaaggtgctgggattgcaagc i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 245219 24 + 74645514 tctcaaggtgctgggattgcaagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 232771 24 + 75148670 tctcaaggtgctgggactgcaagc i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1056884 24 - 1291538 tccCTAGGAGCTGGCATTACAGGT i calJac3.chrUn_GL286409 I 760 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e macFas5.chr16 257878 10545 + 80997621 M e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=143363.000000 s hg38.chr17_GL383563v3_alt 366210 93 + 375691 atgagctgccat-gtccagcTCTCAACCACTTTTTAAATTTTTTCCTTCTGTTGATGAATTTGTGCAACTTAAAAAAAATT--------TTCAggccaggca s panTro4.chr17 349826 97 + 82630442 atgagctgccgt-gtccagcTCTCAACCACTTTTTAAATTTTTTCCTTCTGTTGATGAATTTGTGCAACTTAAAAAAAAAA----AAAATTCAggccaggca i panTro4.chr17 C 0 C 0 s rheMac3.chr16 256619 95 + 80904711 acgagccgccgt-gcccagccCTCAACCACTTTAAAAAATTTTTCCTTCTGTTGATGAATTTGTGCAACTTAAAAAAAA------AAAATCCCggccaggta i rheMac3.chr16 C 0 C 0 s macFas5.chr16 268423 95 + 80997621 ACGAGCCGCCGT-GCCCAGCCCTCAACCACTTTAAAAAATTTTTCCTTCTGTTGATGAATTTGTGCAACTTAAAAAAAA------AAAATCCCggccaggta i macFas5.chr16 M 10545 C 0 s papAnu2.chr16 245243 101 + 74645514 atgagccgccgt-gcccagccctcaaccactttaaaaaatttttccttcTGTTGATGAATTtgtgcaacttaaaaaaaaaaaaagaaaattcaggccaggta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 232795 98 + 75148670 atgagccgccgt-gcccagccCTCAACCACTTTAAAAAATTTTTCCTTCTGTTGATGAATTTGTGCAACTTAAAAAAAAAGA---AAAATTCAggccaggta i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1056908 95 - 1291538 TTGAGCCACCGTCAGTCAGCCCTCAACCCCTTTTAAAAATTTTTCCTTCTGTTGATGAATCTGTGAAACTTAAAAAAA-------AAAATTCAggctgggtg i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e nomLeu3.chr19 323712 359 - 81552678 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=29527.000000 s hg38.chr17_GL383563v3_alt 366303 12 + 375691 tagtggcttaca s panTro4.chr17 349923 12 + 82630442 tagtggcttaca i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 324071 12 - 81552678 TAgtggctcaca i nomLeu3.chr19 I 359 C 0 s rheMac3.chr16 256714 12 + 80904711 tagtggcttaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 268518 12 + 80997621 tagtggcttaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 245344 12 + 74645514 tagtggcttaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 232893 12 + 75148670 tagtggcttaca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1057003 12 - 1291538 tggtggctcaca i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I e ponAbe2.chr17 223333 4693 + 73212453 M a score=561366.000000 s hg38.chr17_GL383563v3_alt 366315 198 + 375691 cctataatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggagtttgagagcagcctggccaatatggtgaaaccccgtctctactaaagatggaaaaattagtcaggcatgatgtcgcacatctgtaatcccagctactcgg----------------------------gaggctgagccaggagaattgtttgaacccaggaggcagagg s panTro4.chr17 349935 198 + 82630442 cctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagtttgagacaagcctggccaatatggtgaaaccctgtctctactaaagatagaaaaattagtcaggcatgatgtcacacatctgtaatcccagctactcgg----------------------------gaggctgagccaggagaatcgcttgaacccaggaggcagagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 228169 198 + 73212453 cctgtaatcccagcactttgggaggctgaggcgggcggatcacttgaggtcaggagtttgaggccagcctggccaatatggtgaaaccctgtctctactaaagatagaaaaattagtcaggcgtgatgtcgcacacctgtaatcccagctactcag----------------------------gaggctgagccaggagaatctcttgaacccaggaggcggagt i ponAbe2.chr17 M 4693 C 0 s nomLeu3.chr19 324083 198 - 81552678 cctgtaatcccagcactttgggaggccaagatgggtggatcacttgaggtcaggagtttgagaccagcctggccaatatggtgaaaccccgtctctactaaaaatacaaaaattagtcgggggtgatgtcgcacacctgtagtcccagctactcgg----------------------------gaggctgagccaggagaatcgcttgaacccaggaggcagagg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 256726 198 + 80904711 cctgtaatctcagcacttcaggaggctgaggagggtggatcacttgagatcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagtcaggcatggtgtcacacacctgtaatcccagctacttgg----------------------------gaggctgagccaggagaatcgcttgaacccaggaggcggagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 268530 198 + 80997621 cctgtaatctcagcacttcaggaggctgaggagggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagtcaggcatggtgtcacacacctgtaatcccagctacttgg----------------------------gaggctgagccaggagaatcgcttgaacccaggaggcggagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 245356 198 + 74645514 cctgtaatcccagcacttcaggaggctgaggcgggtggaacacttgaggtgaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagtcaggcatggtgtcacacacctgtaatcccagctacttgg----------------------------gaggctgagccaggagaatcgcttgaacccaggaggcagagg i papAnu2.chr16 C 0 I 297 s chlSab2.chr16 232905 198 + 75148670 cctgtaatcccagcacttcaggaggctgaggcgggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagtcaggcgtggtgtcacacacctgtaatcccagctacttgg----------------------------gaggctgagccaggagaatcgcttgaacccaggaggcagagg i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1057015 223 - 1291538 tctgtaatcccagcactttgggaggttgaggtgggtgggtcacttgaggtcaggagctcaagactagcctggccaatatagtgaaa-tctgactctactaaaa-tacaaatatgagtcaagtgtggtggcatacacctgtcaccccagctacttggcttgaacctgggaggcagcagttgcagtgaggcagaggcaggc-aatcgcttgaacccgggaggtggtgg i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I a score=2018908.000000 s hg38.chr17_GL383563v3_alt 366513 786 + 375691 ttgcagtgagccgagatcgcaccactgcactccagcctgggcgacacagcaagattctgtctc-------------aaaaaaagaaaaaaTATTCAAaatgagtattatatccatgtggcaacaaaatgaaggatcacaaaagaagatagagt-gaaaacgaagtgtcttttcctctccttccaaagagacagtcattttacccatttcttatgtatccttttagc-agtattccaggcacatacatatatgcatagatggcacct-tttttacacaC--GTGtttatgtggtaagtattgattgaaagcctgctgtatgccagacactactttaggtgatgggggtacagccgggaacaaaacaaagtttccagctttcctgtttctaatagaaagagaaag-tgctacacagataaa----cagatgtacatgtcaagctgc-actcgtgctgtggaggggagtaagcacagcaaag-ggacacaggggaaaggtcaggaaaggcttctctgataaggtaacacgtgaacaaagcaaggacagccagggcaagagtgttc----------------caggtgccggagaaacagcaaggaggtcctggggttggggtgGAGCAC---------GGGGGCAGCAGATGTTAGCAAACCGCACACACCGC------GCCTCGCTCCCTCTCCATGAACAgtcttggcctttgttccacatcagcctaaaatgagctgcctcgttcttttttagaggcagccaagtagtccaccatatggaggtagtacaatttgcttaactaGTTGTAGAGTTTTTCTTTTCC-TTTTTTTTTTT--AAGGTATG s panTro4.chr17 350133 783 + 82630442 ttgcagtgagctgagatcacaccactgcactccagcctgggtgacacagcgagattctgtctc-------------aaaaaaagaaaaaaTATTCAAaatgagtattatatccatgtggcaacaaaatgaaggatcacaaaagaagatagagt-gaaaacggagtgtcttttcctctccttccaaagagacagtcattttacccatttcttatgtatccttttagc-agtattccaggcacatacatatatgcatagatggcacct-tttttacacaCAGGTGTTTATGTGGta----ttgattgaaagcctgctgtatgccaggcactactttaggtgatgggggtacagccgggaacaaaa---agtttccagctttcctgtttctaatagaaagagaaag-tgctacacagataaa----cagatgtacacgtcaagctgc-actcgtgctgtggaggggagtaagcacagcaaag-ggacacaggggaaaggtcaggaaaggcttctctgataagttaacacgtgaacaaagcacggacagccagggcaagagtgttc----------------caggtgccggagaaacagcaaggaggtcctggggttggggtgGAGCAC---------GGGGGCAGCGGATGTTAGCAAACCGCACACACCGC------GCCTCGCTCCCTCTCCATGAACAGTCTTGGCCTTTGTTCCACACCACCCTAAAATGAGCTGCCTTGTTCTTTTTTAGAGGCAGCCAAGTAGTCCACCATATGGAAGTAGTACAATTTGCTTAACTAGTTGTAGAGTTTTTCTTTTCC-TTTTTTTTTTTTTAAGGTATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 228367 803 + 73212453 ttgcagtgagccgagatcgcgccattgcactccagcctgggcgacacagcgagattctgtctc-------aaaaaaaaaaaaaaaaaaaaaaTTCAAAATGAGTATTATATCCAGGTGGCAACAAAATGAAGCATCACAAAAGAAGATAGAGT-GAAAACGAAGTGTCTTTTCCTCTCCTTCCAAAGAGACAATCATTTTACCCATTTCTTATGTATCCTTTTACC-AGTGTTCCAGGCACATACATATATGCATAGATGGCACCT-CTTTTACAAACATGTGtttatgtggtaagtattaattgaaag-atgctgtatgccaggcactactttaggtgatgggagtacagctgggaacaaaacaaagtttccagctttcctgtttctagtagaaagagaaag-tgctagacagataaa----cagatgtacacgtcaagcggtgactcgtgctgtggaggggagtaagcacagcaaagtgtacacaggggaaaggtcaggaaaggcttctctgataaggtgacacgtgaacaaagcaaggacagccagggcaagagtgttccagtggcagggagcagcaggtgccggagaaacagcaaagaggtgctggggttggggTGGAGCAC---------AGGGGCAGCAGATGTTAGCAAACCCCGCACATCGC------GCCTCGCTCCCTCTCTGTGAACAGT------CTTTGTTCCACATCAGCGTAAAATGAGCTGCCTCGTTCTTTTTTAGAGGCAGCCGAGTAGTCCACCATGTGGAGGTAGTACAATCTGCTTAACTAGTTGTAGAGTTTTTCTTTTCC-TTTTTTTTT----AAGGTATG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 324281 792 - 81552678 ttgcagtgagccgagattgcaccactgcactccagcctgggtgtcgcagcgagattctgtctc-------------aaaaaaaaaagaaaT-TTCAAAATGAGTATTTTATGCATGTGGCAACAAAATGAAGCATCACAAAAG----TAGACT-GAAAACTAAGTGTCTTttcctctccttccagagag--aaccattttacccatttcttacatatccttttagc-agttttctaggcacatacatgtatgcataggtggcatct-tttttacacacatgTGtttatgtggtaagtattgactg-aagcctgctgtatgccaggcactactttacgtgatgggggtacagccgggaacaaagcaaagtttccagctttcctgtttctagtataaagcgaaag-tgctacacagataaa----cagatgtacatgtccagcggtgattcatgctgtggagggaagtaagcacagcaaag-ggacacaggggaaagggcaggaaaggcttctttgataaggagacatgtgaacaaagcaaggacagccagggcaagagtgttccagtggcagggagcagcaggtgcaggagaaaaagcaaggaggtcctggggttggggtagagcac---------gggggcAGcagatgttagcaaaccgcacacactgc------acctcgctccctctccgtgaacagtcttggcctttgttccacatcagcctatattgagctgccttgttcttttttagaggcagccaagtggtccaccagatggagttagtacaatttacttaactagtTGTAGAGTTT---TTTTCC-TTTTTTTTT----AAGGTATG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 256924 792 + 80904711 tt-------gccaagataacgccactgcactccagcctgaacgtcgcag--agattctggctc-------------aaaaaaaaaaaaaaaaTTCAAAATGAGTATTATATGCATGTGGCAACAAAGTGAAGCATCAGAAAAGAAGAGAGAGT-GAAAACTAAGTGTCTTttcctctccttccaaagagacaatcattttacccatttcttatgtatcactgtagc-agtattccaggcacatacatatatgcatagat-gca--t-tttttACACACGTGTGtttatgtggtaactatcgatcgaatgcctgccgtatgccaggcactacttta-gtgatgggggtacagccaggaacaaaacaaagtttccagctctcctgtttctagtagaaagagaaagatgctacacagataaa----cagatgtacatgccaagcggtgactcgtgctgtggaggggaataagcacagcaaag-ggacacgggggaaaggtcaggaaaggctactctgataaggtgacatgtgaacaaagtgacgacagccagggcaagagtgttccagtggcagggaacagcaggtgcCGGAGAAACAGCAAGGAGGTCCTGGGGTTGGGGCAGAGCAC----------GGGGCAGcagagggtagcaaaccccacacaccgt------gcctcgctccctctccgtgaacagtcttggcctttgttccacatcagcctaaaatgagctgcctccttcctttttagaggcagccaagtaacccaccatatggatgtggtgcaatgtacttaactagtTGTAGAGTTTTTCTTTTCC-TTTTTTTTCCT--AAGGTATG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 268728 796 + 80997621 tt-------gccaagatcacgccactgcactccagcctgaacatcgcag--agattctgtctc------------aaaaaaaaaaaaaaaaaTTCAAAATGAGTATTATATGCATGTGGCAACAAAGTGAAGCATCAGAAAAGAAGAGAGAGTGGAAAACTAAGTGTCTTTTCCTCTCCTTCCAAAGAGACAATCATTTTACCCATTTCTTATGTATCACTGTAGC-AGTATTCCAGGCACATACATATATGCATAGCT-GCATCT-TTTTTACACACGTGTGtttatgtggtaactatcgatcgaatgcctgccgtatgccaggcactacttta-gtgatgggggtacagccaggaactaaacaaagtttccagctctcctgtttctagtagaaagagaaagatgctacacagataaa----cagatgtacatgccaagcggtgactcgtgctgtggaggggaataagcacagcaaag-ggacacgggggaaaggtcaggaaaggctactctgataaggtgacatgtgaacaaagtgacgccagccagggcaagagtgttccagtggcagggaacagcaggtgcCGGAGAAACAGCAAGGAGGTCCTGGGGTTGGGGCGGAGCAC----------GGGGCAGcagagggtagcaaaccccacacaccgt------gcctcgctccctctccgtgaacagtcttggcctttgttccacatcagcctaaaatgagctgcctccttcctttttagaggcagccaagtaacccaccatatggatgtggtgcaatgtacttaactagtTGTAGAGTTTTTCTTTTCC-TTTTTTTTCCT--AAGGTATG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 245851 815 + 74645514 ttgcagtgagctgagatccggccacagcactccagcctgggtgacagagcaagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaagaaattcaaaatgagTATTATATGCATGTGGCAACAAAGTGAAGCATCacaaaagaagagagagt-gaAAACTAagtgtctcttcctctccttccaaaGAGACAATCATTTTACCCATTTCTTATGTATCATTGTAGTAAGTATTCCAggcacatacatatatgcatatat-gcatcc-TTTTTACACAC--GTGTTTATGTGGTAAGTATCGATTGAATGcctgccacatgccaggcactactTTA-GTGATGGGGGTACAGCcaggaacaaaacaaagtttCCAGCTCTCCTGTTTCtagtagaaagagaaagatgctaCACAGATAAA----CAGATGTACATGTCGAGCGGTGACTCGTGCTGTGGAGGGGAATAAGCACAGCAAAG-GGATATGGGGGAAAGGTCAGGAAAGGCTACTCTGATAAGGTGACATGTGAACAAAGTGACGACAGCCAGGGCAAGAGTGTTCCAGTGGCAGGGAACAGCAGGTGCCGGAGAAACAGCAAGGAGGTCCTGGGGTTGGGGCGGAGCAC----------GGGGCAGCAGAGGTTAGCAAACCCCACACCCCGC------GCCTCGCTCCCTCTCCGTGAACAGTCTTGGCCTTTGTTCCACATCAGCCTAAAATGAGCTGCCTCCTTCCTTTTTAGAAGCAGCCAAGTAATCCACCATATGGATGTGGTGCAATGTACTTAACTAGTTgtagagtttttcttttcc-ttttttttcct--aaggTATG i papAnu2.chr16 I 297 C 0 s chlSab2.chr16 233103 788 + 75148670 tt-------gccaagatcacgccactgcactccagcctggacgtcgcagagagattctgtctc-----------------aaaaaaaaaaaaTTCAAAATGAGTATTATATGCATGTGGCAACAAAGTGAAGCATCACAAAAGAAGAGAGAGT-GAAAACTAAGTGTCTCTTCCTCTCCTTCCAAAGAGACAATCATTTTACCCATTTCTTATATATCATTGTAGC-AGTATTCCAGGCACATACATATATGCATAGAT-GCATCT-TTTTTACACAC--GTGtttatgtggtaagtattgattgaatgcctgccgtatgccaggcactacttta-gtgatgggggtacagccaggaacaaaacaaagtttccagctcttctgtttctagtagaa----aaagatgctacacagataaa----cagatgtacatgtcaagcggtgactcgtgctgtggaggggaataagcacagcaaag-ggacatgggggaaaggtcaggaaaggcttctctgataaggtgacatgtgaacaaagtgacgccagccagggcaagagtgttccagtgacagggagcagcaggtgcCGGAGAAACGGCAAGGAGGCCCTGGGGTTGGGGTGGAGCAC---------GGGGGCAGCAGAGGTTAGCAAACCCCACACGCCGC------GCCTCGCTCCCTCTCCGTGAACAGtcttggcctttgttccacatcagcctaaaatgagctgcctccttcctttctagaggcagccaagtaatccaccatatggatgtggtgcaatggacttaactagtTGTAGAGTTTTTCTTTTCCTTTTTTTTTCCT--CAGGTATG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1057238 798 - 1291538 ttgcagtgagctgtgattgcaccactgcactccagcctgg-catggcagcaagattctgtctc--------------aaaaaaaaaaaaaaaTTCTAAATAAGTGTTACATGCATGTGGCAACAAAGCCACGCATCAGGAAAGAACGTGTAGT-GAAAACTAAGTGTCTTTTCCTCACCTTTCAAACAGACAATCATTTTGCCCATTTCTTATGTATC-TTTTAGC-AGTATTCCAGACACATACATATATGCAGAGATGGCACATGTTTTTATACAC--GTGTTTATTTGGta--------ctgagtgcctgctgtatgccagggactactttaggtgttggg-gtatagccgtgaacaa-----agtttccagctttacggtttttagtagaatgataaatacaatacacaaataagcaaccagctgcaca-gtcacatggtgatatgtgctgtggaggcgaataaggacagcaaag-ggatgtggggg-atggtcaggaaaggcttctctgatgaggtgacatgcgaacaaatcgaggaccgccagggcaagagtgttccagcaccagggagcagcaggtgccggagaag-agcaaggtggtccc-aggttggggtgcagcaccggtgggggtgggggtgcagatgtcagcaaACCCCACGCTGCGCCTGCTGGCTGCACTTCCTCTCCGGGAGCCAT-TGGGCCTTTGTTCCCTATCAGGCTCAAGTGAGCTGCCTCGTTCTTCCTTAGATGTGGCCAAGGAGTCCGCCATATGGATGTAGTGCAATTTAC-TAACTAGTCGCAGAGTCTTTCTTTTCC-TTTTTTTT-----AAGGTATG i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15803335 14388 - 61074082 I a score=187017.000000 s hg38.chr17_GL383563v3_alt 367299 53 + 375691 AAGTGAAAATCAGGAAGCGGTTGGAGTGAGTTCTCAAAGGAGGAAGAGGGAAG s panTro4.chr17 350916 53 + 82630442 AAGTGAAAATCAGGAAGCGGTTGGAGTGAGTTCTCAAAGGAAGAAGAGGGAAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 229170 53 + 73212453 AAGTGAAAATCAGGAAGCGGTTGGAGTGAGTTCTCAAAGGAGGAAAAGGGAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 325073 53 - 81552678 AAGTGAAAATCAGGAAGCGGTTGGAGTGAGTTCTCAAAGGAGGAGAAGGGAAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 257716 53 + 80904711 AAGTGAAAACCAGGAAGCGGTTGGCGTGAGTTCTCGGAGGAGGAAAAGGGAAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 269524 53 + 80997621 AAGTGAAAACCAGGAAGCGGTTGGCGTGAGTTCTCGGAGGAGGAAAAGGGAAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 246666 53 + 74645514 AAGTGAAAACCAGGAAGCGGTTGGCGTGAGTTCttggaggaggaaaagggaag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 233891 53 + 75148670 AAGTGAAAATCAGGAAGCCGTTGGCGTGAGTTCTCGGAGGAGGAAAAGGGAAG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1058036 50 - 1291538 AAGTGAAAATCAGGAAGCG---GGAGTGAGTTCTCAAAGGAGGAAAAGGGAAG i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15817723 53 - 61074082 AAGTGAAAATCAGGAAGCGGTTGGAGTGGGTAATAAAAGGAGGAAAAATAAAG i canFam3.chr9 I 14388 I 196 a score=2972.000000 s hg38.chr17_GL383563v3_alt 367352 2 + 375691 CA s panTro4.chr17 350969 2 + 82630442 CA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 229223 2 + 73212453 CA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 325126 2 - 81552678 TG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 257769 2 + 80904711 CG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 269577 2 + 80997621 CG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 246719 2 + 74645514 cG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 233944 2 + 75148670 CG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1058086 2 - 1291538 TG i calJac3.chrUn_GL286409 C 0 C 0 e canFam3.chr9 15817776 196 - 61074082 I a score=548366.000000 s hg38.chr17_GL383563v3_alt 367354 180 + 375691 cagacctgctcttcacagttgcaaagcctggggcaagagcaggcacagcggcccacgcaccttatgtctaaatattaa--------------aagtta----------tgac-aaactgttaagtgaaatatgcactgttctcctaccttgacgaatatactttcgtaacaacctggaaggtcagatttaaatttcgaatttcag s panTro4.chr17 350971 180 + 82630442 cagacctgctcttcacagttgcaaagcctggggcaagagcaggcacagcggcccacgcaccttatgtctaaatattaa--------------aagtta----------tgac-aaactgttaagtaaaatatgcactgttctcctaccttgacgaatatactttcgtaacaacctggaaggtcagatttaaatttcgaatttcag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 229225 180 + 73212453 cagacctgctcttcacagttgcaaagcctggggcaagagcagacacagcggcccacacaccttatgtctaaatattaa--------------aagcta----------tgac-aaactgttaagtaaaatatgtactgttctcctaccttgacaaacatactttcgtaacaacctggaaggtcagacttaaatttcgaatttcag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 325128 180 - 81552678 cagacctgctgttcacagttgcaaagcctggggcaagagcagacacagtggcccacgtacgttatgtctaaatattaa--------------aagtta----------tgac-aaactgttaagtaaaatatgtactgttctcctaccttgacgaatatactttcataacaacctggaaggtcagatttaaatttcgaatttcag i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 257771 168 + 80904711 CAGACCTGCTTTTCGCA------------ggggcaagagcagacacggcagcccacgcaccttatgtctaaatattaa--------------aagtta----------tgac-aaactgttaaggaaaatatgtcctgttctcctaccttgatgaatacactttcgcaacaacctggaaggtcagatttaaatttagattttccg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 269579 168 + 80997621 CAGACCTGCTTTTCGCA------------ggggcaagagcagacacggcagcccacgcaccttatgtctaaatattaa--------------aagtta----------tgac-aaactgttaaggaaaatatgtcctgttctcctaccttgatgaatacactttcgcaacaacctggaaggtcagatttaaatttagaatttccg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 246721 168 + 74645514 CAGACCTGCTTTTCGCA------------GGGGCAAGAGCAGACACAGCAGCCCACGCACCTTATGTCTAAATATTAA--------------AAGTTA----------TGAC-AAACTGTTAAGGAAAATATGTCCTGTTCTCCTACCTTGACGAATACACTTTCGCAACAACCTGGAAGGTCagatttaaatttagaatttCCG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 233946 168 + 75148670 CAGACCTGCTTTTCACA------------ggggcaagagcagacacagcagcccacacaccttatgtctaaatattaa--------------aagtta----------tgac-aaactgttaagtaaaatatgtcctgttctcctaccttgacgaatacactttcgtaacaacctggaaggtcagatttaaatttagaatttcag i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1058088 195 - 1291538 caggtctgctggtcacagctgcaaagcctgggaccagagcagacgtcgctggccatgcacctcaagtctaaatattaagttacccgttcagtaacttt----------taataaaactgttacataaaatatgtactgttctcctaccctgacgaatagaccttcctgacaacctggaagatcagatttaaatttagaatgtcag i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15817972 189 - 61074082 caaacctgatcttaacagttgtgaagcccgaagcaagagtggaaacagaggtccacataccatatatctaaacattaa--------------aagtcataaattaaattgac-atactgttaaataaactatgtactatt-tcccaccttaacaaacagaccttcataatgatctggaaggctagattttattttaaaattTCAG i canFam3.chr9 I 196 I 186 a score=27522.000000 s hg38.chr17_GL383563v3_alt 367534 8 + 375691 attcttca s panTro4.chr17 351151 8 + 82630442 atgcttca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 229405 8 + 73212453 attcttca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 325308 8 - 81552678 attcttca i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 257939 8 + 80904711 attcttca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 269747 8 + 80997621 attcttca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 246889 8 + 74645514 ATTCTTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 234114 8 + 75148670 attcttca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1058283 8 - 1291538 attcctca i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15818347 8 - 61074082 aatCTTTA i canFam3.chr9 I 186 I 103 a score=2103895.000000 s hg38.chr17_GL383563v3_alt 367542 745 + 375691 gggttctgcagcctgccccaggcctgcacctcctcttcctacttccagctcca----gcactgagaaggtcccgtgagcacttgggtgtggacgcctgagcctgccctgtgcagtttccatccatg----ctgcccttgggcctaagggtgctccggaggaaagacccaggaaagaggcccacataggccctacaagcaggctgaggctatttgggcaagaaactccgaggtcccaggtactcggattgtgggctagaaggaaggaggggggataggctctacgtgggtgaga-cc--cctcgattccacgtgattcccatctctcagggagagatacagctggagtggagaca--gcaggatccgatggagcacgggacagagggaagggactcctcttgcccacatcgaag---gctggtgctgCAGAAGTGTGGACACTGCTTGTCTGCCTTGGGGAAGACACTCAC---------AGTGTGGGCAGGACAGAGTGGAAAGCTGGAATCAGCAGCCGGGCCAGCTGGAGGGACCCAGGCTGAGCACAC-AGCAGGAAAGCCATGAACCGTAAGCCCTGCCC----------------------------------------------------------------AGGGCTTGCCCACATC-AGTGCCAACCAAAGGGGAAAACCTGGTCCTTCTTGGGAAAGAAACTTCCACTCTGGAGAATGTTCGAAGAGCTCATAACAATAATAGTCTCTGAAACCACAAAGAC--AAAGTATAAACAAGGAAGCCGACACCAACAGTGAAGATGCCACCATCTCG-CTGGTTGGTCAACAA s panTro4.chr17 351159 747 + 82630442 gggttctgcAGCCTGCCCCAGGCCTGCACCTCCTCTTCCTACTTCCAGCTCCA----GCACTGAGAAGGTCCCGTGAGCACTTGGGTGTGGACGCCTGAGCCTGCCCCGTGCAGTTTCCATCCATG----CTGCCCTTCGGCCTAAGGGTGctccggaggaaagacccaggaaagaggcccacataggccctacaagcaggctggggctatttgggcaagaaactccgaggtcccaggtactcggattgtgggctagaaggaaggaggggggataggctctacgtgggtgaga-cc--cctcgatcccacgtgattcccatctctcagggagagatacagctggagtggagacaaagcaggatccgatgcagcatgggacagagggaagggactcctcttgcccacatcgaag---gctggtgctgCAGATGTGTGGACACTGCTTGTCTGCCTTGGGGAAGACACTCAC---------AATGTGGGCAGGACAGAGTGGAAAGCTGGAATCAGCAGCCGGGCCAGCTGGAGGGAGCCAGGCTGAGCACAC-AGCAGGAAAGGCATGAACCGTAAGCCCTGTCC----------------------------------------------------------------AGGGCTTGCCCACATC-AGCGCCGGCCAAAGGGGAAAACCTGATCCTTCTTGGGAAAGAAACTTCCACTCTGGAGAATGTTTGAAGAGCTCATAGCAATAATAGTCCCTGAAACCACAAAGAG--AAAGTATAAACAAGGAAGCCGACACCAACAGTGAAGATGCCACCATCTCG-CTGGTTGGTCAACAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 229413 736 + 73212453 gggttctgcagcctgccccaggcctgcacctcctcttcctacttccagctcca----gcactgagaaggtcccgtgagcacttgggtgtggacgcctgagcctgccccgtgcagtttccatccatg----ctgcccttgggcctaggggtgctccggaggaaagactcaggaaagaggcccacataggccctacaagcaggctggggctatttgggcaagaaactccaagttccaaggtactcggattgtgggctagaaggaaggaggggggataggctctacgtgggtgaga-cc--cctcaattccacgtgattcccgtctctcagggagagatacagctggagtggagccagaacaggatccggtggagcaggggacagagggcagggactcctcttgcccacatcgaag---gctggtgctgCAGAAGTGTGGACACTGCTTGTCTGCCTTGGGGAAGACACTCACA--------AGTGTGGGCAGGACAGAGTGGAAAGCTGGAATCAGCCGCTGGGCCAGCTGGAGGGACCCAGGCTGAGCACAC-AGCAGGAAAGGCATGAACCACAAGCCCTACCC----------------------------------------------------------------AGGGTTTGCCCACATC-AGCGCC------------AAACCTGATCCTTCTTGGGAAAGAAACTTCCACTCTGGAGAATGTTTGAAGAGCTCATAACAATAACAGTCGCTGAGACCACAAGGAG--AAAGTATAAACGAGGAAGCCGACACCAACAGTGAAGATGCCACCATCTCA-CTGGTTGGTCAACAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 325316 744 - 81552678 gggttctgcagcctgccccaggcctgcacctcctcttcctacttccagctcca----gcactgagaaggtcccatgagcacttgggtgtggacgcctgagcctgccc-gtgcagtttccatccatg----ctgcccttgggcctaggggtgctcccggggaaggactcaggaaagaggcccacataggccctacaagcaggctggggctgtttgggcaagaaactccaaggtcccaggtactcggattgtgggctagaaggaaggagggggg-ccggctctacgtgggtgagaccc--cctcgattccacgtgattcccgtctctcagggagagatacagctggcgtggggccagggcaggatccggtggggcacgggacaccgggcagggactccgcttgcccacatggaag---gctggtgctgCACAAGTGTGGACACTGCTTGTCTGCCTTGGGGAAGATACTCAC---------AGTGTGGGCAGGACAGAGTGGAAAGCTGGAATCAGCAGCCAGGCCAGCTGGAGGGACCCGGGCTGTGCACAC-AGCAGGAAAGGCACGAACCGCAAGCCCTATCC----------------------------------------------------------------AGGGC-TGCCCACATG-AGCGCCGGCCACGGGGGAAAACCTGATC---CTCGGGAAAGAAACTTCCACTCTGGAGAATGTTTGAAGAGCTCGTAACAATAACAGTTGCTGAGACCAGAAGGAGAAAAAGTATAAACACGGAAGCCGACGCCAACAGTGAAGATGCCGCCATCTCG-CTGGTTGGTCAACAA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 257947 702 + 80904711 ggtttctgcggcccgcccccggcctgcacctcctcttcctacttccagctcca----gcactgagaaggtcccgtgggcacatgggtgtggacgcctgagcctgcct-gtgcggtttccattcacgctgcctgc-------cccaggactgctcaggaggaag-----------gaggcccacacaggccctacaagcaggctggggctatctgggcaagaaactccaaggtcccaggtactcggattgtgggctagaaggaaggaggggggataggctgtatgtgggtgaga-cc--cctcgattccacgtgattcctgacactcagggagagacacagctggagtggagtcagagcaggatccagtggagcacgagacacagggcagggactcctctcgcccacaccaaag---gctggtgctgCAGAAGTGTGGACACT-CTTGTCTGCCTTGGGGAAGACACTC-----------GGTGTGGGCAGGACAGAGTAAAAAGCTGGAATCAGCAGCCAGGC---------------------------C-AGTAGGAAAGGCAGGAACCGCAAGCCCTACCC----------------------------------------------------------------AGGGCTTGCCCACATC-AGCGCCAGCCAAAGGGGAAAACCTGATGCTTCTTGGGAGAGAAACGTCCACTCTGGAGAATGTTTGAAGAGCTCGTAACAGTAACAGCCGCCGAGACTGCAAGGAG--AAGGTATAAACGAGGAAGCTGACGCCAACAGTGAAGGCGCCACCATCTCT-CCTGTGGCTCAGTGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 269755 703 + 80997621 ggtttctgcggcccgcccccggcctgcacctcctcttcctacttccagctcca----gcactgagaaggtcccgtgggcacatgggtgtggacgcctgagcctgcct-gtgcggtttccattcacgctgcctgc-------CCCAGGACTGCTCAGGAggaag-----------gaggcccacacaggccctacaagcaggctggggctatctgggcaagaaactccaaggtcccaggtactcggattgtgggctagaaggaaggaggggggataggctgtatgtgggtgaga-cc--cctcgattccacgtgattcctggcactcagggagagacacagctggagtggagtcagagcaggatccagtggagcacgagacacagggcagggactcctctcgcccacaccaaag---gctggtgctgCAGAAGTGTGGACACT-CTTGTCTGCCTTGGGGAAGACACTC-----------GGTGTGGGCAGGACAGAGTAAAAAGCTGGAATCAGCAGCCAGGC---------------------------C-AGTAGGAAAGGCAGGAACCGCAAGCCCTACCC----------------------------------------------------------------AGGGCTTGCCCACATC-AGCGCCAGCCAAAGGGGAAAACCTGATCCTTCTTGGGAGAGAAACGTCCACTCTGGAGAATGTTTGAAGAGCTCGTAACGGTAACAGCCGCCGAGACTGCAAGGAG--AAGGTATAAACGAGGAAGCTGACGCCAACAGTGAAGGCGCCACCATCTCTCCCTGTTGCTCAGTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 246897 698 + 74645514 GGGTTCTATGGCCCGCCCCCGGCCTGCACCTCCTCTTCCTACTTCCAGCTCCA----GCGCTGAGAAGGTCCCGTGGGCACATGGGTGTGGACGCCCGAGCCTGCCT-GTGCGGTTTCCATTCATG----CTGC-------CCCAGGACTGCTCAGGAGGAAA-----------GAGGCCCACACAGGCCCTACAAGCAGGCTGGGGCTATTTGGGCAAGAAACTCCAAGGTCCCAGGTACTCGGATTGTGGACTAGAAGGAAGGAGGGGGGATAGGCTGTACGTGGGTGAAA-CC--CCTCGATTCCACGTGATTCCTGACACTCAGGGAGAGACACAGCTGGAGTGGAGTCAGAGCAGGATCCAGTGGAGCACGAGACAGAGGGCAGGGACTCCTCTTGCCCACACCAAAG---GCTGGTGCTGCAGAAGTGTGGACACT-CTTGTCTGCCTTGGGGAAGACACTC-----------GGTGTGGGCAGGACAGAGTAGAAAGCTGGAATCACCAGCCGGGC---------------------------C-AGCAGAAAAGGCAGGAACCGCAAGCCCTACCC----------------------------------------------------------------GGGGCTTGCCCACATC-AGTGCCAGCCAAAGGGGAAAACCTGATCCTTCTTGGGAGAGAAACTTCCACTCTGGAGAATGTTTGAAGAGCTCGTAACAGTAACAGCCGCCCAGACCGCAAGGAG--AAGGTATAAACAAGGAAGCCGACACCAACAGTGAAGGCGCCACCGTCTCT-CCTGTTGCTCAGTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 234122 697 + 75148670 gggttctgcagcccgccccccgcctgcacctcctcttcctacttccagctcca----gcactgagacggtcccgtgagcacatgggtgtggacgcctgagcctgcct-gtgcggtttccattcatg----ctgc-------ccCAGGAGTGCTCAGgaggaaa------------aggcccacacaggccctacaagcaggctggggctatctgggcaagaaactccaaggtcccaggtactcggattgtgggctagaaggaaggaggggcgataggctgtacgtgggtgaga-cc--cctcgattccac-tgattcctgtctctcagggagagatacagctggagtggagtcagagcaggatccagtggagcacgagacagagggcagggactcctcttgcccacaccgaaggctgctgctgCTGCAGAAGTGTGGACGCT-CTTGTCTGCCTTGGGGAAGACACTC-----------GCTGTGGGCAGGACAGAGTAGAAAGCTGGAATCAGCAGCCAGGT---------------------------C-AGCAGGAAAGGCAGGAACCACAAGCCCTACCC----------------------------------------------------------------GGGGCTTGCCCACATC-AGCGCCAGCCAAAGGGGAAAACCCCATCCTTCTTGGGAGAGAAACTTCCACTC--GAGAATGTTTGGAGAGCTCATAGCAGTAACAGCCGCCGAGACCGCGAGGAG--AAGGTATAAACAAGGAAGCCGACGCCAACAGTGAAGGTGCCACCATCTCT-CCTGTTGCTCAGTGA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1058291 774 - 1291538 ggcttctgcggc---cccctggcctgcacctcc-cctcctgcttccagctcca----gctctgagatggtcccgtgagcacat-ggtatgggcgcctcagcccgccc-gcaaagtctccatccaca----ctgcccTTGGGCCAGGGGCTGctcaggaggaaaggctcaggcaagtggcccacacaggccctacaagcaggct-aggctatttgggcaagaaactctaaggtcccaggtacttggactgtgggctggaaggagggaggcgggataggctctaggtgggtgaga-cc--cctcaattccacgtgattcctgcctcccagggag-ggtgcagctggagtggagtcagagcagagtccggtggagcacaagactcagggcagggactcctctagcccacatggaag---gctggtgctgTGGAAGTGTGGACACTACTTGTCTGCCCTGGGGAAGAC------------------------------------AAAGCTGGAATCAGCAGCTGGGCCAGCTGGAGGAACCCAGGCTCAGCACAC-AGCCGGAGAAGCATGAGACCCAAGCCCTCCCCAGCAGGAGAGGCATGAGAGCCAAGTCCTCCCCAGCAGGAGAGGCGTGAGACCCAGGCCCTCCCTAGGGCTCGCCCACATC-AGCGCTGGCCAAAGGGGAAAACCTGATCTTTCTTGGAAAAGAAAGTTCCACTCTCGAGAATGCTTGAAGAGCTCATAACAATAACAGCTGCTGAGACCACAAGGAG--AAAGTATAAACAAGGAAGCCGAGGCCAGC-GTGAGGG-GCCACCTTCTCT-CCTGTCGGTCAACGA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15818458 735 - 61074082 GAGTTTTgcacctagcgcatgacctgccactcatcttctcattcccagctccatcctgcaatgacaaggtcct-tgaatgaataggtctggacacctcagtctgcCT-ATGGAGTTTCCATCTATG----CTGCCCTTGG-CCCAGGATTActctgcaggatagactcagaaaagagactgaggcaggcccaacaaatgggctggggttatttgtgcaataaagtccaagatgccagagactcagattatgggtt-----gaaggatgggggagagagactaggtgagcagga-ccaaacttgattccatggtcttcctgtcccttttggagggagatagctggaggagagtcagagcagggtcctgcaaagcacaagatctagggcagggtctctacttgcacacatctaag---gctggtgctgCTGAAGAGTGAA-ACCACCTGGTAGCATTGGGAAAGAAACTGACAGCATGGAGAAAGTGGGCAGGACAGAGCAGAGACCTGGAACCAGCAGCCCAGCCACCTGGAGGGACCCAGACTGAACAGGCAAGTAGGAAAGGATAGAGTCACAAGCTCT--CC----------------------------------------------------------------AACACATGGCCAAGTCAAGCGCTGGCCAAA-GGAAAAACTTAATCCTTAT----AAAGAAACCTC-----------ACCTTTTATGTGCTCAAAACAATACCTACCACTGACACCACAAGGAG--AAAGTATAAACAAGGAAGCTGAAACAATTA--AAAAATACTATCATCTCT-TCTGTCGGTCAGTGA i canFam3.chr9 I 103 C 0 a score=5309.000000 s hg38.chr17_GL383563v3_alt 368287 3 + 375691 ATA s panTro4.chr17 351906 3 + 82630442 ATA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 230149 3 + 73212453 ATA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 326060 3 - 81552678 ATA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 258649 3 + 80904711 ACG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270458 3 + 80997621 ACG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 234819 3 + 75148670 ACG i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1059065 3 - 1291538 ACA i calJac3.chrUn_GL286409 C 0 C 0 s canFam3.chr9 15819193 3 - 61074082 ACA i canFam3.chr9 C 0 C 0 e papAnu2.chr16 247595 0 + 74645514 C a score=6441.000000 s hg38.chr17_GL383563v3_alt 368290 3 + 375691 TCA s panTro4.chr17 351909 3 + 82630442 TCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 230152 3 + 73212453 TCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 326063 3 - 81552678 TCA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 258652 3 + 80904711 TCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270461 3 + 80997621 TCG i macFas5.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1059068 3 - 1291538 TCA i calJac3.chrUn_GL286409 C 0 I 156 s canFam3.chr9 15819196 3 - 61074082 TCA i canFam3.chr9 C 0 C 0 e chlSab2.chr16 234822 0 + 75148670 C e papAnu2.chr16 247595 0 + 74645514 C a score=54812.000000 s hg38.chr17_GL383563v3_alt 368293 40 + 375691 TTGTAAAGTCTACCACTCTCTTGCAGGATTCGTGGAACTg s panTro4.chr17 351912 40 + 82630442 TTGTAAAGTCTACCGCTGTCTTGCAGGATTCGTGGAACTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 230155 40 + 73212453 TTGTGAAGTCCACCGCTCTCTTGCAggattcgtggaactg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 326066 40 - 81552678 CTGTAAAGTCTACCGCTCTCTTGCAGGATTCGTGCAACTG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 258655 40 + 80904711 TTGTGAGGTCTGCCGCACTCCTGCAGGAGACGTGGAACCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270464 40 + 80997621 TTGTGAGGTCTGCCGCACTCCTGCAGGAGACGTGGAACCG i macFas5.chr16 C 0 C 0 s canFam3.chr9 15819199 40 - 61074082 TTGTAAAATTGACTGCTCTCCTGCAAGAGATGTAGAACTA i canFam3.chr9 C 0 C 0 e calJac3.chrUn_GL286409 1059071 156 - 1291538 I e chlSab2.chr16 234822 0 + 75148670 C e papAnu2.chr16 247595 0 + 74645514 C a score=13371.000000 s hg38.chr17_GL383563v3_alt 368333 15 + 375691 ggaacatgcgttctg s panTro4.chr17 351952 15 + 82630442 GGAACATGCGTTCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 230195 15 + 73212453 ggaacatgggttcca i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 258695 15 + 80904711 GGAACGTGGGTCCCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270504 15 + 80997621 GGAACGTGGGTCCCG i macFas5.chr16 C 0 C 0 s canFam3.chr9 15819239 15 - 61074082 GAAATGTGGATTTtg i canFam3.chr9 C 0 N 0 e calJac3.chrUn_GL286409 1059071 156 - 1291538 I e chlSab2.chr16 234822 0 + 75148670 C e papAnu2.chr16 247595 0 + 74645514 C e nomLeu3.chr19 326106 0 - 81552678 C a score=8861.000000 s hg38.chr17_GL383563v3_alt 368348 46 + 375691 gccacatttggtgactgactagcattgtgaggttgagcaattcact s panTro4.chr17 351967 46 + 82630442 GCCACATTTGGTGACTGACTAGCATTGTGAGGTTGAGCGATTCACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 230210 45 + 73212453 gcc-cgtttggtgactaattagcattgtgaggttgagcgattcact i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 258710 12 + 80904711 GCC-CATTTGGTG--------------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270519 12 + 80997621 GCC-CATTTGGTG--------------------------------- i macFas5.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1059071 156 - 1291538 I e chlSab2.chr16 234822 0 + 75148670 C e papAnu2.chr16 247595 0 + 74645514 C e nomLeu3.chr19 326106 0 - 81552678 C a score=91.000000 s hg38.chr17_GL383563v3_alt 368394 1 + 375691 t s panTro4.chr17 352013 1 + 82630442 T i panTro4.chr17 C 0 C 0 e calJac3.chrUn_GL286409 1059071 156 - 1291538 I e chlSab2.chr16 234822 0 + 75148670 C e papAnu2.chr16 247595 0 + 74645514 C e rheMac3.chr16 258722 0 + 80904711 C e macFas5.chr16 270531 0 + 80997621 C e nomLeu3.chr19 326106 0 - 81552678 C e ponAbe2.chr17 230255 0 + 73212453 C a score=602.000000 s hg38.chr17_GL383563v3_alt 368395 3 + 375691 ACA s panTro4.chr17 352014 3 + 82630442 ACA i panTro4.chr17 C 0 C 0 s papAnu2.chr16 247595 3 + 74645514 ACG i papAnu2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1059071 156 - 1291538 I e chlSab2.chr16 234822 0 + 75148670 C e rheMac3.chr16 258722 0 + 80904711 C e macFas5.chr16 270531 0 + 80997621 C e nomLeu3.chr19 326106 0 - 81552678 C e ponAbe2.chr17 230255 0 + 73212453 C a score=42428.000000 s hg38.chr17_GL383563v3_alt 368398 43 + 375691 TCATTGTAAAGTCTACCGCTCTCTTGCAGGATATGtggaacta s panTro4.chr17 352017 43 + 82630442 TCATTGTAAAGTCTACCGCTCTCTTGCAGGATATGtggaactg i panTro4.chr17 C 0 C 0 s rheMac3.chr16 258722 35 + 80904711 --------AGGTCTGCCGCACTCCTGCAGGAgacgtggaaccg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270531 35 + 80997621 --------AGGTCTGCCGCACTCCTGCAGGAgacgtggaactg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 247598 43 + 74645514 TCATTGTGAGGTCTGCCGCGCTCCTGCAGGAGACGTGGAACTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 234822 43 + 75148670 TCATTGTGAGGTCTGCCGCGCTCCTGCAGGAgacggggaactg i chlSab2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1059071 156 - 1291538 I e nomLeu3.chr19 326106 0 - 81552678 C e ponAbe2.chr17 230255 0 + 73212453 C a score=27207.000000 s hg38.chr17_GL383563v3_alt 368441 16 + 375691 ggaacatgggttccaa s panTro4.chr17 352060 16 + 82630442 ggaacatgggttccaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 326106 16 - 81552678 GGAacgtgggttccgg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 258757 16 + 80904711 ggaacgtgggtcccgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270566 16 + 80997621 ggaacgtgggtcccgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 247641 16 + 74645514 GGAACGTGGGTTCCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 234865 16 + 75148670 ggaacgtgggttccgg i chlSab2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1059071 156 - 1291538 I e ponAbe2.chr17 230255 0 + 73212453 C a score=92642.000000 s hg38.chr17_GL383563v3_alt 368457 43 + 375691 cccatttggtgactgactagcattgtgaggttgagcgattcac s panTro4.chr17 352076 43 + 82630442 cccatttggtgactaattagcattgtgaggttgagcgattcac i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 326122 43 - 81552678 cccatttggtgactaattagcgttgtgaggctgagcgattcac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 258773 43 + 80904711 cccatttggtgacgaaccagcattgtgaagttgagcgatcgac i rheMac3.chr16 C 0 I 1 s macFas5.chr16 270582 43 + 80997621 cccatttggtgacgaaccagcattgtgaagttgagcgatccac i macFas5.chr16 C 0 I 1 s papAnu2.chr16 247657 43 + 74645514 CCCATTTGGTGACAAACCAGCATTGTGAGGTTGAGCGATCCAC i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 234881 43 + 75148670 cccatttggtgactaaccagcattgtgaggttaagcgattcac i chlSab2.chr16 C 0 I 1 s calJac3.chrUn_GL286409 1059227 43 - 1291538 ccaatttgctgactaattagcaccgtgaggttgagcgaatcac i calJac3.chrUn_GL286409 I 156 I 1 e ponAbe2.chr17 230255 0 + 73212453 C a score=733383.000000 s hg38.chr17_GL383563v3_alt 368500 257 + 375691 ttacatctctgtgtatcagtttcctcatctatccaacaggagtatacttgcccaatctctttcagagttacgagaatcGGTTCCATTCCCCTTGCtttgctcatttagccactcacaaaacgtcagctctgtgccaagagctgggcaggtctgcaagagcagaaataaagacatcgtactttctcatactttctgacctcaaggaacttggtccgactgaggagacaaacaGCTGTGCTCCAAGAGCTGCCCATTCC s panTro4.chr17 352119 257 + 82630442 ttacatctctgtgtatcagtttcctcatctatccaacaggagtatacttgcccaatctctttcagagttacgagaatcGGTTCCATTCCCCTTGCtttgctcatttagccactcacagaacgtcagctctgtgccaagagctgggcagggctgcaagagcagaaataaagacatcgtactttctcatactttctgacctcaaggaacttggtccaactgaggagacaaacaGCTGTGCTCCAAGCGCTGCCCATTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 230255 253 + 73212453 ttacatctctgtgtatcagtttcctcatctatcgaataggagtatacttgcccaatctctttcagagttACAAGAATCGGTTCCATTCCCCTTGCtttgctcatttagccactcacagaacgtcagctctgggccaagagctgggcagggctgcaagagcagaaataa----atcgtactttctcatactttctgacctcagggaacttggtccaacggaggagacaaacaGCTGTGCTCCAAGAGCTGCCCATTCC i ponAbe2.chr17 C 0 I 10572 s nomLeu3.chr19 326165 256 - 81552678 ttacatcgctgtgtatcagttccctcgtctatcgaataggagtatacttgcccaatctctttcagagTCACAAGAATCAGTTCCATTCCCCTTGCtttgctcatttagccactcacagaacgtcagctccgtgccaagggctggg-agggctgcaagagcagaaataaagacatcgtactttctcatactttctgacctcaaggaacttggtccgactgaggagacaaacaGCTGGGCTCCAAGAGCTGCCCATTCC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 258817 254 + 80904711 ttacaccgctgtgtatcagttccctcgtctatcgaataggagtacacttgaccagtctctttcagagttACAAGAATCGGTCCCATCACCCTTGCTTTGCTCATTTAGCCACTCACAGAACGTCAGCTCTGTGCCGAGAGCTGGGCAGGGCTGCAAGAGCAGAAGTAAAGACATCATACTTTCTCATACTTTCTAACCTCAAGGAACTTGGTCCGACT---GAGACAAACAGCTGTGCTCCAAGAGCTGCCCATTCC i rheMac3.chr16 I 1 C 0 s macFas5.chr16 270626 254 + 80997621 ttacgccgctgtgtatcagttccctcgtctatcgaataggagtacacttgaccagtctctttcagagttACAAGAATCGGTCCCATCACCCTTGCTTTGCTCATTTAGCCACTCACAGAACGTCAGCTCTGTGCCAAGAGCTGGGCAGGGATGCAAGAGCAGAAGTAAAGACATCGTACTTTCTCATACTTTCTAACCTCAAGGAACTTGGTCCGACT---GAGACAAACAGCTGTGCTCCAAGAGCTGCCCATTCC i macFas5.chr16 I 1 C 0 s papAnu2.chr16 247701 254 + 74645514 TTACACCGCTGTGTATCAGTCCCCTCGTCTGTCGAATAGGAGTACACTTGACCAGTCTCTTTCAGAGTTACAAGAATCGGTCCCATCACCCTTGCTTTGCTCATTTAGCCACTCACAGAACGTCAGCTCTGTGCCAAGAGCTGGGCAGGGCTGCAAGAGCAGAAATAAAGACATCATACTTTCTCATACTTTCTGACCTCAAGGAACTTGGTCCGACT---GAAACAAACAGCTGTGCTCCAAGAGCTGTCCATTCC i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 234925 254 + 75148670 ttacacctctgtgtatcagttccctcgtctatcgagtaggagtacacttgaccagtctctttcagagttACAAGAATCGGTTCCATCACCCTTGCTTTGCTCATTTAGCCACTCACAGAACGTCAGCTCTGTGCCAAGAGCTGGGCAGGGCTGCAAGAGCAGAAATAAAGACATCATACTTTCTCATACTTTCTGACCTCAAGGAACTTGGTCCGACT---GGGACAAACAGCTGTGCTCCAAGAGCTGCCCATTCC i chlSab2.chr16 I 1 C 0 s calJac3.chrUn_GL286409 1059271 245 - 1291538 ttacagctctgtgtatcagctccctcatctagcggata-gaacacccttgcacagtctctttcagagttACAAGAATTGGTTCTATTCTCCTGGCTTTGCTTATGTAGCcactcacagaatgtcagctctgtgccaagagccgggcagggctgtgagagcagagatgaacaca----------tcacaccttctgacctcaaggaacttggtccgactaaggaggcaaaGAGCTGTGCTCCAAGAGCTG-CCATTCC i calJac3.chrUn_GL286409 I 1 C 0 a score=198514.000000 s hg38.chr17_GL383563v3_alt 368757 83 + 375691 TTGTGCTGTTGCAGGCTTAGAAGCATTTTCCAGATAAATAAATCGAAGTTAAGATAGAATGA-----------ggccgggcacagtggctctcg s panTro4.chr17 352376 83 + 82630442 ATGTGCTGTTGCAGGCTTAGAAGCATTTTCCAGATAAATAAATCGAAGTTAAGATAGAATGA-----------ggccgggcacagtggctctcg i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 326421 83 - 81552678 ATGTGCTGTTGCAGGCTTAGAAGCATTTTCCAGATAAATAAATAGAAGTTAAGATAGAATGA-----------ggccgggcacagtggctctcg i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 259071 83 + 80904711 ATGTGCTGTTGCAGGCTTAGAAGCATTTTCCAGATAAATAAATAGAAGTTAAGATAGAATGG-----------ggccaggcacagtggctcttg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270880 83 + 80997621 ATGTGCTGTTGCAGGCTTAGAAGCATTTTCCAGATAAATAAATAGAAGTTAAGATAGAATGG-----------ggccaggcacagtggctcttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 247955 83 + 74645514 ATGTGCTGTTGCAGGCTTAGAAGCATTttccagataaataaatagaagttaaGATagaatgg-----------ggccaggcacagtggctctcg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 235179 83 + 75148670 ATGTGCTGTTGCAGGCTTAGAAGCATTTTCCAGATAAATAAATAGAAGTTAAGATAGAATGA-----------ggccgggcacagtggctctca i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1059516 94 - 1291538 ATGTGCTGTTGCAGGGTTAGAAGCATTTTCCAGATAAATAAATAGAAGTTAAGATAGAATAAGGTGGGGCGTGggccgggcccggtggctcatg i calJac3.chrUn_GL286409 C 0 C 0 e ponAbe2.chr17 230508 10572 + 73212453 I a score=1265230.000000 s hg38.chr17_GL383563v3_alt 368840 469 + 375691 cctgtaatcccagcacttttgggaagccaaggcaggcagatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaatcctgtctctactgaaaatacaaaaattagctgggcgtggt-ggc-gcacgcctgtagtcccagctactcaggaggctgaagcaggagaatcgcttgaacctgggaggaagaggttacagtgagccaagactgcgccactgcactccagcctgggcaacagagtgagactctgcctc--aaaaa-----aaaaagaaaacaaaaaTGTTAAGATAGAGAGTTGTTCTTTT----------------------------------AAAGTAA-----------------------AGGGGGAAGCATTTTATTTCTGtgctaaattatggttttcaaaaaggtcaaatcatgcctttgatgtaaaattttattcaacactttgacgaagaaaccaataagatgttaaaactggttcaaataatttgaaggaaagaaatgtatataTtat s panTro4.chr17 352459 470 + 82630442 cctgtaatcccagcacttttgggaggccgaggcaggcagatcacttgaggccaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactgaaaatacaaaaattagctgggcgtggt-ggc-gcacacctgtagtcccagctactcaggaggctgaagcaggagaatcgcttgaacctgggaggaagaggttacagtgagccaagactgcgccactgcactccagcctgggcaacagagtgagactctgcctc-aaaaaa-----aaaaagaaaacaaaaaTGTTAATATAGAAAGTTGTTCTTTT----------------------------------AAAGTAA-----------------------GGGGGGAAGCATTTTATTTCTGtgctaaattatggttttcaaaaaggtcaaatcatgcctttgatgtaaaattttattcaacactttgatgaagaaaccaataagatgttaaaactggttcaaataatttgaaggaaagaaatgtatataTtat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 241080 468 + 73212453 cctgtaatcccagc-cctttgggaggccgaggcaggcagatcacttgaggccaggagttcaagaccagcctggctaacatggtgaaatcctgtctctattgaaaatacaaaaattagctgggcgtggt-ggcggggcgcctgtagtcccagctactcaggaggctgaagcaggagaatagcttgaacctgggaggaggaggctacagtgagccaagattgcgccactgcactccagcctgggcaactcagtgagactctgcctc---aaaa-----aaaaagaagacaaaaaTGTTAAGATAGAAAGTTGTTCTTTT----------------------------------AAAGTAA-----------------------GGGGGGAAGCATTTTATTTCTGtgctaaattacagttttcaaaaaggtcaaatcatgcctttgatgtaaaattttattcaacactttgacgaagaaaccaataagatgttaaaactggttcaaataatttgaaggaaagaaatgtatataTtat i ponAbe2.chr17 I 10572 C 0 s nomLeu3.chr19 326504 464 - 81552678 cctgtaatcccagcacttttgggaagccgaggcaggcagatcacttgaggccaggatttcaagaccagcctggccaacatagtgaaatcttgtctctactgaaaatacaaaaattagccgggcgcggt-ggt-gcacatctgtagtcccagctactcaggaggctgaagcaggagaattgcttgaacctgggaggcggacgct--agcgtgcagagactgcaccaccgcactccagcctgggcgacagagtgagactctgcctc---aaaa-----aaaaggaaaacaaaaaTGTTAAGATAGAAAGTTGTTCTTTT----------------------------------AAAGTAA------------------------GGGGGAAGCATTTTATTTCTGtgctaaattatggttttcaaaaaggtcaaatcacgcctttgatgtaaaa-tttattcaacactttgacgaagaaaccaataagatgttaaaactggttcaaataatttgaaggaaagaaatgtatataTtat i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 259154 475 + 80904711 cctgtaatcccaatac-tttgggaggctgaggcaggtggatcacttgaggcctggagttcgagaccagcctggccaacatggtaaaaccctgtctctactgaaaatacaaaaatgagctgggcgtgatgggc-cagcgcctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaacccaggaggcagaagttacagtgagccaagattgcgccactgcactccagcctgggtgacagcgtgagactctgcctcaaaaaaaattaaaaaaagaaaacaaaaa-GTTAAGATAGAATGTTGTTCTTTT----------------------------------AAAGTAA-----------------------GGGGGGAAGCATTTCATTTCAGTGCTAAATTATGGTTTTCAAAAAGGTCAAATCACACCTTTGATGTAAAATTTTACTCAGCACTTTGATGAAGAAACCAATAGGATATTAAAACTGGTTCAAATAATTTGAAGGAAAGAAatgtatatattat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 270963 475 + 80997621 cctgtaatcccagtac-tttgggaggctgaggcaggtggatcacttgaggcctggagttcgagaccagcctggccaacatggtaaaaccctgtctctactgaaaatacaaaaatgagctgggcgtgatgggc-cagcgcctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaacccgggaggcagaagttacagtgagccaagattgcgccactgcactccagcctgggtgacagagtgagactctgcctcaaaaaaaattaaaaaaagaaaacaaaaa-GTTAAGATAGAATGTTGTTCTTTT----------------------------------AAAGTAA-----------------------GGGGGGAAGCATTTCATTTCAGTGCTAAATTATGGTTTTCAAAAAGGTCAAATCACACCTTTGATGTaaaattttactcagcactttgatgaagaaaccaataggatattaaaactggttcaaaTAATTCGAAGGAAAGAAatgtatatattat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 248038 471 + 74645514 cctgtaatcccagtac-tttgggaggctgaggcaggtggatcacttgaggcctggagttccagaccagcctggccaacatggtgaaaccctgtctctactgaaaatacaaaaatgagctgggcgtgatgggc-cagcgcctgtaatcccacctactcgggaggctgaagcaggagaatcgcttgaacccaggaggcagaagttacagtgagccaagattgcgccactgcactccagcctgggtgacagagtgagactctgcctcaaaaaaaat---aaaaagaaaacaaaaa-gttaagatAGAATGTTGTTCTTTT----------------------------------AAAGTAA-----------------------GGGGGGAAGCATTTCATTTCAGTGCTAAATTATGGTTTTCAAAAAGGTCAAATCACACCTTTGATGTAAAATTTTACTCAGCACTTTGATGAAGAAACCAATAGGATATTAAAACTGCTTC-AATAAtttgaaggaaagaaatgtatatattat i papAnu2.chr16 C 0 I 3417 s chlSab2.chr16 235262 467 + 75148670 cctataatcccagtac-tttgggaggccgaggcatgtggatcacttgaggcctggagttccagaccagcctggccaacacggtgaaaccctgtctctactgaaaatacaaaaatgagctgggtgtgat-ggc-cagcgcctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaacccaggaggcaggggttacagtaagccaagattgtgccactgcactccagcctgggtg--agagtgagactctgcctcaaaaaaa-----aaaaagaaaacaaaaa-GTTAAGATAGAATGTTGTTCTTTT----------------------------------AAAGTAA-----------------------GGGGGGAAGCATTTCATTTCAGtgctaaattatggttttcaaaaaggtcaaatcacgcctttgatgtaaaattttattcaacaccttgatgaagaaaccaataggatattaaaactggttcaaataatttgaAGGAAAGAAATGTATGTATTAT i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1059610 514 - 1291538 cctgtaatgccagcac-tttgagaggctgaggcaggcagatcacttgaggccaggagttcaagacgagcccggccaacagggtgaaactccctctctacaaaaaatttaaaaattagccgggcatggt-ggt-gcaccattgtactcctagctactcaggaggctgaagcaggagaattgcttaaacccaggaggtggaggttgcaatgagccaagatggcactattgcactccagcctgggcaaca-agcaagactctgtctc-----aa-----aggaaaaaaaaaagaa-GTTGAGATAGAATGTTGTTCTTTTTACAGAACAGAAATGAGtataaaaaataaagaaaaaaataaaaaaGAATGTGTTTTTTTTAAAAGGGGGAAAGCATTTTATTTCTATGCTAAATTATGGTTTTCAAAATGGTCAAATCATGCTTTTGATGTAAAA--CTattcagtgcttt-atgaagaaaccagtaagatgttaaaactggttcaaataatttgaAGGCGGGGAACATGTATAT--- i calJac3.chrUn_GL286409 C 0 C 0 a score=208494.000000 s hg38.chr17_GL383563v3_alt 369309 133 + 375691 acacaaacatatatagtatctataaacatatatataccatataaacatctattgtatatataaac--atattatttttatacattttatataggtatataatatgtattatgtgtgtctttatatataaacataA s panTro4.chr17 352929 135 + 82630442 acacaaacatatatagtacctataaacatatatataccatataaacatctattgtatatataaacatatattatttttatacattttatatatgtatataatatgtattatgtatgtgtttatatataAACATAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 241548 135 + 73212453 acacaaacatatatagtatctataaacatatatataccatataaacgtctattgtatatataaacatatattatttttatacatttgatatatgtatataatatgtattatgtatgtgtttatatataAACATAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 326968 129 - 81552678 acacaaacatagatagtatctataaacatatatataccatataaacatctattgtatatataaac--atattatttttatacattttatatatgtatataatatgtatta----tgtgtttatatataaacataa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 259629 124 + 80904711 acataaacatatatagtatctataaac----atataccatataaacatctattgtatatataaat--a---tatttttatatattttatatatttatttaatatatattatg--tatgtttatatataAACATAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 271438 116 + 80997621 acataaaaatatatagtatctataaac----atataccatataaacatctattgtatat----at--a---tatttttatatattttata----tatttaatatatattatg--tatgtttatatataaacataa i macFas5.chr16 C 0 C 0 s chlSab2.chr16 235729 109 + 75148670 ACATAAACATAT-------------------ATATACCATATAAACATCTATTGTATATATAAAC--A---TATTTTTATACATTTTATATATTTATATAATATGTATTATG--TATGTTTATATATAAACATAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1060124 100 - 1291538 ----AAACATCTATAGTACACATAAAC----------CATATAAACATCTAT---------------A---TACTTTTATACATTTTGTAT---TTTATGGTGTGTATTATATGTGTGTTTATATATAAACATAA i calJac3.chrUn_GL286409 C 0 I 1209 e papAnu2.chr16 248509 3417 + 74645514 I a score=4011.000000 s hg38.chr17_GL383563v3_alt 369442 2 + 375691 AC s panTro4.chr17 353064 2 + 82630442 AC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 241683 2 + 73212453 AC i ponAbe2.chr17 C 0 I 1763 s nomLeu3.chr19 327097 2 - 81552678 ac i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 259753 2 + 80904711 AC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 271554 2 + 80997621 ac i macFas5.chr16 C 0 C 0 s chlSab2.chr16 235838 2 + 75148670 AC i chlSab2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1060224 1209 - 1291538 I e papAnu2.chr16 248509 3417 + 74645514 I a score=1365.000000 s hg38.chr17_GL383563v3_alt 369444 1 + 375691 A s panTro4.chr17 353066 1 + 82630442 A i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 327099 1 - 81552678 a i nomLeu3.chr19 C 0 I 1033 s rheMac3.chr16 259755 1 + 80904711 A i rheMac3.chr16 C 0 I 2009 s macFas5.chr16 271556 1 + 80997621 a i macFas5.chr16 C 0 I 2015 s chlSab2.chr16 235840 1 + 75148670 A i chlSab2.chr16 C 0 I 2059 e calJac3.chrUn_GL286409 1060224 1209 - 1291538 I e papAnu2.chr16 248509 3417 + 74645514 I e ponAbe2.chr17 241685 1763 + 73212453 I a score=54114.000000 s hg38.chr17_GL383563v3_alt 369445 603 + 375691 ggccaggcgcggtggctcaagcctgtaatcccagcactttgggaggccgagacgggaggatcacgaggtcaggagatcgagaccatcctggctaacatgatgaaaccccgtgtccactaaaaatacaaaaaaaaattagctgggcgtggtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcaaaagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaacataaaCATACACCCACCCACACAAACAcagttgacctttgaccaacatggaggttagggctgccaatccccgtgccatcaaaaatccgtgtgtaacttctgactcccccaaaacataagtaacaatagcctactattaaccagaagccttaccaatggcataaacagtcgatgaacatgttttttgtatatgtatcatatacagtaaagtaaataaaatgttattaagaaaatcagagagaaaacacattgacagtgctgtactgacactgattactgtaagtttatatcatctgtc s panTro4.chr17 353067 600 + 82630442 ggccaggcgcggtggctcacgcctgtaatcccagcactttggaaggccaagacgggaggatcatgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctccaataaaaatacaaaaaaaaattagacgggcatggtggtgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcgtggacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcaaaagagcgagacttcatctc---aaaaaaagaaaaaaaaaacataaaCATACACCCACCCACACAAACAcagttgacctttgaccaacatggaggttagggctgccaatccccgtgccatcaaaaatccgtgtgtaacttctgactcccccaaaacataagtaacaatagcctactattaaccagaagccttaccaatggcataaacagtcgatgaacatgttttttgtatatgtatcatatacagtaaagtaagtaaaatgttattaagaaaatcagagagaaaacacattgacagtactgtactgacactgattactgtaagtttatatcatctgtC i panTro4.chr17 C 0 I 1254 e calJac3.chrUn_GL286409 1060224 1209 - 1291538 I e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I e nomLeu3.chr19 327100 1033 - 81552678 I e ponAbe2.chr17 241685 1763 + 73212453 I a score=0.000000 s hg38.chr17_GL383563v3_alt 370048 1355 + 375691 tacaagatgaatggtctgtctgaaacggcaggccgccgcagctgcagacctcaatctatggtacatatcaggcaatccagctttttcttgtaatgtcaggactttcctttgctttttgggagcacttccagcatcatccgtagcagttcatctgggtcctacggtgttgctataaggcttagggcattgcactaaacacagtgaaagacgctggagaactccaatcgatcactttttcctgctgttcacaacttactggagaggtaagctgctcatgtggagataattagcgggtttgttcatgtttgtttttgtttttgttttgagacagagtcttgctccatcgcccaggctggagtgcagtggcacagtcatggctcgctgcagcctccaactcctgggctcaactgatcctctccttcagcctcctgagtagctgggactacaggcaggcgccaccatgcctgggtaattttttaatttttcttttgtagaaaaaatttctggtttcaaactcccaacctcaagtgatcctccttcctcgggctcctaaagcactgggattataggcatgagccaccgcctagataatttactttgtcacatgacattttaaggggatatttgcaacacttgggctgattaaaataacaacaggagatggctacaaaattatcacagtagggcagtatgtgttacagtgaaatttatacagttacaatttaacactgcatctttaaattatcacagtagtgcaatattacggtgaactttacacagttacaatttaacactgcgtctttaaattatcacggtaatgcggtatgtgttacagtgaactttatacagttacgatttaacactgcatctttaaattatcacagcaatgcggtatgtgttacagtgaactttatacagttacgatttaacactgcgtctttTaattatcacggtaatgcggtatgtgttacagtgaactttatacagatacgatttaacactgcatctttaaattatcacggtaatgcggtatgtgttacagtgaactttatacagttacgatttaacactgcatctttaaattatcacggtaatgcggtatgtgttacaattaactttatacagttacgatttaacactgcatctttaagttatcacagtaatgtggtatgtgttacagtgaagtttatacagttatgatttaacactgcatctttaaattaccacagtaatgcggtatgtgttacaattaactttatacagttacgatttaacactgcatctttaaattatcacagtaatgtggtatgtgttacagtgaagtttatacagttatgatttaacactgcatcttt e calJac3.chrUn_GL286409 1060224 1209 - 1291538 I e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I e nomLeu3.chr19 327100 1033 - 81552678 I e ponAbe2.chr17 241685 1763 + 73212453 I e panTro4.chr17 353667 1254 + 82630442 I a score=5006.000000 s hg38.chr17_GL383563v3_alt 371403 69 + 375691 aaattatcacagtaatgtggtatgtgttacagtgaagtttatacagttacgatttaacactgcatcttt s ponAbe2.chr17 243448 69 + 73212453 aaattatcacagtagcacagtatgtgttataatgaactttacacagttaggatttaacactgcatcttt i ponAbe2.chr17 I 1763 C 0 e calJac3.chrUn_GL286409 1060224 1209 - 1291538 I e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I e nomLeu3.chr19 327100 1033 - 81552678 I e panTro4.chr17 353667 1254 + 82630442 I a score=29786.000000 s hg38.chr17_GL383563v3_alt 371472 138 + 375691 aaattatcacagtaatgcggtatgtgttacagttaactttatacagttacgatttaacactgcgtctttaaattatcacggtaatgcggtatgtgttacaattaactttacacagttacgatttaacactgcatcttt s panTro4.chr17 354921 137 + 82630442 aaattatcacagtagcgcagtatgtgttacagtgaactttacacagttacaatttaacactgcatttttaaattatcacggtaatgcagtatgt-ttacaattaactttatacagttacgatttaacactgcatcttt i panTro4.chr17 I 1254 C 0 s ponAbe2.chr17 243517 134 + 73212453 aaattatcacagtaatgcagtatgtgttacaagtaactttatacagttacgatttgacactacatctttaaattatcacagtagcgcaatg----ttacagtgaactttatacagttatgatttaacatggcatcttt i ponAbe2.chr17 C 0 C 0 e calJac3.chrUn_GL286409 1060224 1209 - 1291538 I e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I e nomLeu3.chr19 327100 1033 - 81552678 I a score=758556.000000 s hg38.chr17_GL383563v3_alt 371610 1003 + 375691 aagttatcacggtaatgcggtatgtgttacaattaactttatacagttatgatttaacactgcatctttaaattatcacagtagtgcagcacgtgttacagttatc------------------tttttttttttgtttttgagatggagttttgttcttgttgcccaggctggagtgcaatggcgcaacctcagctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagccttccgagtagctgggattacaggtgcctgccaacatgcccagccaa-------------ttttttttgtatttttagtagagagcaggtttcaccaaattggccaggctggtctggaactcctgacctcaggtgatccacctgccttggccccccaaagtgctgggattacaagcatgagccaccacgcccggctacagtgaactttatacagttacaatttaacactgcatctttaaattatcacagtagtccaagatgtgttgcagtgaactttatacagttatatttaatactgcatctttaaatttgtttatgtttctcttgactgcaggcatggtctgtaaatgtgtgggtaagttttgatacattttaactttttaaagtagatgtatgtatattttatggtggtaaatgattttaaaaaactagtatTGggctaggtgcagtggttcatgcctataatcctagtgctttgggaggccaaggcaggaggattgcttcaggcctggtgttcaagaccagcctgagaaacatagcaagactctgtctcttgtagagaaaaTTTTCTAGAATTTTCCTTGATAGGAACTATTCTTGACAGCTCCTGGTGCCCATGTCGTGGGGGCACCGTTCATTCTTTTGCTGATATTTGACATCCCACATATGACTATATCGCTGAGTTCTTTCCCTTTGTTTTTTCTTTTTTTGAGATGGAGTCTcaacatagtgagaccctgtctctacaaaaataaaataaaataaaagatgtaaaaattagccaggtgtg s panTro4.chr17 355058 999 + 82630442 aaattatcacagtagtgcaat----gttacgctgaactttatacagttacgatttaacactgcatctttaaattatcacggtaatgcggtatgtgttacagttatc------------------tttttttttttttttttgagatggagttttgttcttgttgcccaggctggagtgcaatggtgcaacctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagccttccaattagctgggattacaggtgcccgccaacatgcccagccaa-------------ttttttttgtatttttagtagagagcaggtttcaccaaattggccaggctggtctggaactcctgacgtcaggtgatccacccaccttggccccccaaagtgctgggattacaagcatgagccaccacgcccggctacagtgaactttatacagttacaatttaacactgcatctttaaattatcacagtagtccaggatgtgttgcagtgaactttatacagttatatttaatactgcatctttaaatttgtttatgtttctcttgactgcaggcatggtctgtaaatgtgtgggtaagttttgatacattttaactttttaaagtagatgtatgtatattttatggtggtaaatgattttaaaaaactagtatTGggctaggtgcagtggttcatgcctataatcctagtgctttgggaggccaaggcaggaggattgcttcaggcctggtgttcaagaccagcctgagaaacatagcaagactctgtctctTGTAGAGAAAATTTTCTAGAATTTTCCTTGATAGGAACTATTCTTGACAGCTCCTGGTGCCCATGTCGTGGGGGCACCGTTCATTCTTTTGCTGATATTTGACATCCCACGTATGACTATATCGCTGAGTTCTTTCCCTTTGTTTTTTCTTTTTTTGAGATGGAGTCTcaacatagtgagaccctgtctctacaaaaataaaataaaataaaagatgtaaaaattagccaggtgtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 243651 1004 + 73212453 aaattatcacagtagcacagt----gttaccgttaactttatacagttacaatttaacactgcatctttaaattatcacagtactacagtatgtgttacggttatc--tttt-----------ttttttttttttttttttgagatggagttttgttcttgttgcccaggctggagtgcaatggcgcaaccttggctaactgcaacctctgcctcccaggttcaagcaattctctggcctcagcctcccgagtagctgggattacagatgcccgccaacatgcccagccaa-------------ttttttttgtatttttagtagacagcgggtttcaccaaattggtcaggctggtctggaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaagcatgagccaccacgcccggctacagtgaactttatacagttacaatttaacattgcatctttaaattatcacagtagtccagtatgtgttacagttaactttatacagttagatttaatactgcatctttaaattcgtttacatttctcttgactgcaggcatggtctgtaaatgtgtgggtaagttttgatacattttaactttttaaagtggatgtatgtatattttatggtggtaaatgattttttaaaactagtatTGGCctaggtgcagtggttcatgcctataatcctagcactttgggaggccaaggcaggaggattgcttcaggccaggtgttcaagaccagcctgagaaacatagcaagactctgtctctTGTAGAGAAAATTTTCTAGAATTTTCCTTGATAGGAACTATTCTTGACAGCTCCTGGTGCCCATGTCGTGGGGGCACCGTTCATTCTTTTGCTGATATTTGACATCCCACATGTGACTATATCTCTGAGTTCTTTCCCTTTGTTTTTTCTTTTTTTGAGATGGAGTCTcaacatagtgagaccctgtctctacaaaaataaaataaaataaaagatgtaaaaattagccaggtgta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 328133 1004 - 81552678 aaattatcacagtagcacagtatgtgttacagtgaactttatgcagtta-gatttaacactgcatctttaaattatcacagtagtgcagtatgtgttacagttatctttttt-----------tttttttttcttttttttcaaatggagtttcgttcttgttgcccaggctggagtgcaatagggcaaccttggctcactgcaacctctgcctcctaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacacgtgcctgccaacatgcctagccaa-------------ttttttttgtaattttagtagagagtgggtttcaccaaattgtccaggctggtcttaaactcctgacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaagcgtgagccaccactcccggctacagtgaactttatacagttacaatttaacactgcatctttaaattatcacagtagtccagtatgtgttacagttaactttatacagttagatttaatactgcatctttaaattcctttatgtttctcttgact----gcatggtctgtaaatgtgtgggtaagttttgatacattttaactttttaaagtagatgtatgtatattttatggtggtaaatgattttaaaaaactagtatTGggctaggtgcagtggttcatgcctataatcttagcgatttgggaggccaaggcaggaggattgcttcaggccaggtgttcaagaccagcctgagaaacatagcaagactctgtctcttgtagagaaaaTTTTCTAGAATTTTCCTTGATAGGAACTATTCTTGACACCTCCTGGTGCCCATGTGATGGGGGCA-TGTTCATTCTTTTGCTGATATTTGACATCCCACGTGTGACTATATCGCTGAGTTCTTTCCCTTTGTTTTTTCTTTTTTTGAGATGGAGTCTcaacatagtgagaccctgtctctacaaaaataaaataaaataaaagatgtaaaaattagccagttgtg i nomLeu3.chr19 I 1033 C 0 s calJac3.chrUn_GL286409 1061433 991 - 1291538 aaatgattacagtagcgcagtatg-attatagttcactttatatggtta-gagttaacactacacctttaaattatcacagtagcacagtatgtattacagttaag--ttttgtgTGTGTGTATGttttcttgtttgttttgagacggagacttactc-tgtcgcccaggctggagtgcaatggtgcaacctcgggtcactgcaacctctgcctccctggttcaagcaattctcatgcctcagcttcccaagtatctggcattacaggtgcctaccaccacacctggtcaatttttttttttttttttttttgtatttttagtagagacagggttctaccatgttggccaggctggtctcaaactcctgacctcacatgatccagctgcctcggcctcctaaagtgctgggattacaggcatgagccaccgggcc---ttacagttaactttatacagata-gatttcacactgcatctttaaattatcacaggagtgcagtatgggtcacagttaactttatacagtcagatttaacact-catccttaaatccatttacatttctcttgactgcatacatggtctgtaagtgtgtagataagtttttacacattttaactttttaaggtagatttgtgtatatttcatggtggtaagttatttttaaaaactagcatTGggctaggtgcagtggttcatgctcataatcctagtggctggggaggccgaggcagga-----------------gtgttcaagaacagcctgggaaacatagcaaga--ctgtctctTCTTGAGAAAAATTTCTAGAATTTTCCTTGATATGAAC-ATTCTTGACAGCTCCTGGTGCCCATGCTGTGGGAGCACAGTTCATTCTTTCACTGATGTTTGATACCCTACATGTGAATATATTGCTTATTCCCCCCC--------TTTTTTTTTTTGAGATGAAGTCTTaacatagtaagaccctgtctctaca-----aaaataaaataaaagatgtaaaaattagccaggtgtg i calJac3.chrUn_GL286409 I 1209 C 0 e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I a score=57773.000000 s hg38.chr17_GL383563v3_alt 372613 108 + 375691 gtggcctgcaactgtagtcccagctacctgggaggctgaagcaggaggacagcttgaccttaggagttggaggctgcagtgagtgattgtttcattgcactctagcct s panTro4.chr17 356057 108 + 82630442 gtggcctgcaactgtagtcccagctacctgggaggctgaagcaggaggacagcttgacctcaggagttggaggctgcagtgagtgattgttccattgcactctagcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 244655 108 + 73212453 gtggcctgtgactgtagtcccagctacctggaaggctgaaacaggaggacagcttgacctcaggagttggaggctgcagtgagtgattgtgccattgccctctagcct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 329137 108 - 81552678 gtggcctgcaactgtagtcccagctacctgggaggctgaagcaggaggacagcctgacctcaggagttggaggctgcagtgagtgattgtgccattgcactccagcct i nomLeu3.chr19 C 0 C 0 e calJac3.chrUn_GL286409 1062424 0 - 1291538 C e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I a score=568353.000000 s hg38.chr17_GL383563v3_alt 372721 720 + 375691 gggcaacagagcaagaccctatctcttaaaataatacactagtgctacatatattttatgcgttcatgacctacctttttcttccttttttcaatatttccaggctaagcagttcatcttctagttttttcaaattgttacaaatctccaaaaaattttccaatatatgtattgaaaaaaatccacatgtaagtgaacccacacagttcaaacccatgttgttcaaggCCAAATATATTagagaaatgctgaaatgaagttgctaataaatgcaaa-gtggttaacacccataatatcctacagtacaataaaatgtaatgttttgagattatcttttctccaggatagaaTTGTATCTTTGCCAGACAAaattgtatctttgccagacaaaattcatttgtattcttgtaggtaagaatcacttgcattactgtaagtttttttacagcttagcttttatccctatggagttgtaaaatagcCTAGTTATTAGAAAGGTAAGTCAAGGTGCACCCCATAGAATCATAATC-CCCAAGAGTTAGGAGGGCAACACCTGGCATTCCACAGAAAGGACACCCAGCATTCTCTTTTGCCCATTTCCAAATCTTGAACGAC-ATTGCCCCTGATTGTATTGGTAACCTTC---tttttttttttttttttttttttttttgagacagggtctcactctgtcacccaggctggagtacagtggtgcaatca s panTro4.chr17 356165 696 + 82630442 gggcaacagagcaagaccctatctcttaaaataatacactagtgctacatatattttatgcattcatgacctacctttttcttccttttttcaatatttccaggctaagcagttcatcttctagttttttcaaattgttacaaatctccaaaaaattttccaatatatgtattgaaaaaaatccacatgtaagtgactccacacagttcaaacccatgttgttcaaggCCAAATATATTagagaaatgctgaaatgaagttgctaataaatgcaaa-gtggttaatacccataatatcctacagtacaataaaatgtaatgttttgagattatcttttctccaggatagaa----atc------------aattgtatctttgccagacaaaattcatttgtattcttgtaagtaagaatcacttgcattactgtaagtttttttacagcttagcttttatccctatggagttgtaaaatagcCTAGTTATTAGAAAGGTAAGTAAAGGTGCACCCCATAGAATCATAATC-CCCAAGAGTTAGGAGGGCAACACCTGGCATTCCACAGAAAGGACACCCAGCATTCTCTTTTGCCCATTTCCAAATCTTGAACGAC-ATTGCCCCTGATTGTATTGGTAACCttc-----------tttttttttttttttttttgagacagggtctcactctgtcacccaggctggagtacagtggtgcaatca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 244763 698 + 73212453 gggcaacagagcaagaccctatctcttaaaataatacactagtactacatatattttatgcattcatgacctaactttttcttcattttttcaatatttccaggctatgcagttcatcttctagttttttcaaattgttacaaatctccaaaaaagtttccaatatatgtattgaaaaaaatccacatgtaagtggacccacacagttcaaacccatgttgttcaaggCCAAATATATtaaagaaatgctgaaatgaagttgctaataaatgcaaa-gtggttaatacccataatatcctacagaacaataaaatgtaatgttttgagattatcttttctctgggatagaa----atc------------aattgtatctttgccagacaaaattcatttgtattcttgtaggtaagagtcacttgcattactgtaagtttttttacagcttagcttttatccctatggagttgtaaaatagcCTAGTTATTAGAAAGGTAAGTAAAGGTGCACCCCATAGAATCATAATC-CCCAAGAGTTAGGAGGGCAACACCTGGCATTCCACAGAAAGGACACTCAGCATTCTCTTTTGCCCATTTCCAAAACTTGAACGAC-ATTGCCCTTGATTGTATTGTTAACCttt---------tttttttttttttttttttttgagacagggtctcactctgtcatccaggctggagtacagtggtgcaatca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 329245 709 - 81552678 gggcaacagagcaagaccctatctcttaaaataatacactagtactacatatattttatgcattcatggcctacctttttcttcgttttttcaatatttccaggctacgcagttcatcttctagttttttcaaattgttacaaatctccaaaaaattttccaatatatgtattgaaaaaaatccacatgtaagtggacccacacagttcaaacccatgttgttcaaggCCAAATATATTagagaaatgctgaaatgaagttgctaataaatgcaaaggtggttaatacccataatatcctacagtacaataaaatgtaatgttttgagagtatcttttctccagtatagaa----atc------------aattgtatctttgccagacaaaattcatttgtattcttgtagggaagagtcacttgcattactataagtttttttacagcttagcttttatccctatggagttgtaaaatagcCTAGTTATTAGAAAGGTAAGTAAAGGTGCACCCCATAGAATCATAATC-CCCAAGAGTTAGGAGGGCAATACTTGGCATTCCACAGAAAGGACACCCAGCATTCTCTTTTGCCCATTTCCAAATCTTGAACGACAATTGCCCTTGATTGTATTGGTAACCTTCttttttttttttttttttttttttttttttgagacagggtctcactctgtcatccaggctggagtacagtggtgcaatca i nomLeu3.chr19 C 0 C 0 s calJac3.chrUn_GL286409 1062424 690 - 1291538 gGGCAACAGAGCAAGGCCCTATCTCTAAAAATaatagactagtactacatatattttatgcattcatgacctacctttttaat--ttatttgaatatttccaggctatgcagttcatcttctagttttttcaaattgttacaaatctccaaagaatcttccaatatatgtgttgaaaaaaatccacatataagtggacccaaacacttccaacccatgttgttttaggtcaaATATGTTCCATAaatgctgaaattaagttgctaataaatgcaaaggtggttaatacccttagtagcctacaatgcaataaaatctaatgtttt-agattatcttttctttgggatagaa----atc------------aattgtatctttgccagacaaaattcatttgtattcttgtaggtaagagtcacttgcattactgcaag-ctttttacagcttagcttttatccctatggagttgtaaaatagcCTAGTTATTAAAAAGATAAGTAAAAGTGCACCCCATAGAATCATAATCGCCCGGGGGTCCGGAGGATGGCACCTGGCGTTCCACAGAAAGGACACACAGCATTTTCTTTTGCCCATTTCCAAACCTTGGACAAT-ATTGCCCTTGACTGTGTTGGTGAACttc--------------ttttttcgtttctttggagac-gaatctcactctgtcactcaggctggagtgcagtggtgcagtca i calJac3.chrUn_GL286409 C 0 I 1955 e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I a score=4919.000000 s hg38.chr17_GL383563v3_alt 373441 10 + 375691 ttgcACTCCA s panTro4.chr17 356861 10 + 82630442 TTGCACTCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 245461 10 + 73212453 tggcACTCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 329954 10 - 81552678 tggcACTCCA i nomLeu3.chr19 C 0 C 0 e calJac3.chrUn_GL286409 1063114 1955 - 1291538 I e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I e macFas5.chr16 271557 2015 + 80997621 I a score=10888.000000 s hg38.chr17_GL383563v3_alt 373451 14 + 375691 ctacttgggaggct s panTro4.chr17 356871 14 + 82630442 ctacttgggaggct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 245471 14 + 73212453 ctacttgggaggct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 329964 14 - 81552678 ctacttgggaggct i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 273572 13 + 80997621 ctactcgggaggc- i macFas5.chr16 I 2015 C 0 e calJac3.chrUn_GL286409 1063114 1955 - 1291538 I e chlSab2.chr16 235841 2059 + 75148670 I e papAnu2.chr16 248509 3417 + 74645514 I e rheMac3.chr16 259756 2009 + 80904711 I a score=385113.000000 s hg38.chr17_GL383563v3_alt 373465 148 + 375691 gaggcaggagaatcacttgaacccgggaggcggaggctgcagtgagccgacatggcgccactccactccagcctgggcCTC-AACGAAAAAAAGATCCAGG-TTTTTTTC------TTTC-----TTTATCTTTTCCTTAAAC-AAGCATG-aacccgctatc s panTro4.chr17 356885 148 + 82630442 gaggcaggagaatcacttgaacccgggaggcggaggctgcagtgagccgacatggcgccactccactccagcctgggcCTC-AACGAAACAAAGATCCAGG-TTTTTTTC------TTTC-----TTTATCTTTTCCTTAAAC-AAGCATG-AACCCGCTATC i panTro4.chr17 C 0 M 1068 s ponAbe2.chr17 245485 151 + 73212453 gaggcaggagaatcacttgaacccgggaggcggaggccgcagtgagccaggatggcgccactccactccagcctggacctc-aacaaaaAAAAGATCCAGGTTTTTTTTC------TTTT-----TTTATTTTTTCCTTAAACAAAGCATGAAACCCACTATC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 329978 153 - 81552678 gaggcaggagaatcacttgaacccgggaggcggaggctgcaatgagccgagatggcgctactccactccagcctgggcCTC-AACAAAAAAAAGATCCAGG-TTTTTTTA------TTTCTTTCTTTTATCATTTCCTtaaac-aagcatg-aacccactatc i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 261765 159 + 80904711 gaggcaggagaatcacttgaacccgggaggcagaggctgcagtgagctgagatgtcgcctctgcactccagcctgggcCTC-AGCAGAAAAAAGATTCGGG-TGTTTTTTTTTTTCTTTCTTTCTTTTATCTTTTCCTtaaac-aggcatg-aaccaactatc i rheMac3.chr16 I 2009 C 0 s macFas5.chr16 273585 150 + 80997621 -----aggagaatcacttgaacccgggaggcagaggctgcagtgagctgagatgtcgcctctgcactccagcctgggcCTC-AGCAGAAAAAAGATTCGGG-TGttttttttt---tttctttc-tttatcttttCCTTAAAC-AGGCATG-AACCAACTATC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 251926 153 + 74645514 gaggcaggagaatcacttgaacctgggaggcagaggctgcagtgagctgacatgtcacctctgcactccagcctgggcctc-aacAGAAAAAAGattcagg-tgtttttt------tttctttcttttatcttttccttaaAC-AAGCATG-AACCAACTATC i papAnu2.chr16 I 3417 C 0 s chlSab2.chr16 237900 153 + 75148670 gaggcaggagaatcacttgaacccaggaggcggaggctgcagtgagctgagacgtcacctctgcactccagcctgggcCTC-AACAGAAAAAAGATCCAGG-tttttttt------tttctttcttttatcttttCCTTAAAC-AAGCATG-aaccaactatc i chlSab2.chr16 I 2059 C 0 s calJac3.chrUn_GL286409 1065069 151 - 1291538 gagacaggagactcgcttgaatctggtaggtagagattgcagtgagccaagatcacaccacttcactccagcctgggcctcaaaaaaaaaaaaaaTCCAGG-ATTTTT--------TTTCTTTCTTTCATC-TTTCCTtaaac-aagcatg-aacccactatc i calJac3.chrUn_GL286409 I 1955 C 0 a score=355222.000000 s hg38.chr17_GL383563v3_alt 373613 161 + 375691 caaaccaagaagtc-aaacataaccaaccgtctcatcgtcctgtgcacccctcccttccccga-------ctccccaacccccaccaagaggtcaccactgtccctgccctacagtttacactttttgttgcactgtaaaatatcgttgtatcataaatacatttgtgt s ponAbe2.chr17 245636 162 + 73212453 CAAACCAAGAAGTCAAAACATAACCAACTGTCTCATCGTCCTGTGCGCCCCTCCCTTCCCCCA-------CTCCCCGGTCCCCACCAAGAGGTCACCACTGTCCCTGCCCTATTGTTTACACTTTTTATTGCACTGTAAAATACCGTTGTATCATAAATACATGTATGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 330131 161 - 81552678 caaaccaagaagtc-aaacataaccaacgatctcatcgtcctgtgcgcccctcccttccccca-------ttccccggcccccaccaagaggtcaccactgtccctgccctgaagtttgcactttttattgcactgtaaaattccgttgtgtcataaatacatgtatgt i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 261924 161 + 80904711 caaaccaagaagcc-aaacataaccaaccatctcatcgtcctgtgcactcctctcttccccct-------ttccctggccgccaccaagaggtcaccactgtccctgtcctaaagtttgtgctttttattgcattgtaaaataccgttgtatcataaacacatgtatgt i rheMac3.chr16 C 0 I 34 s macFas5.chr16 273735 161 + 80997621 CAAACCAAGAAGCC-AAACATAACCAACCATCTCATCGTCCTGTGCACTCCTCTCTTCCCCCT-------TTCCCTGGCCGCCACCAAGAGGTCACCACTGTCCCTGTCCTAAAGTTTGTACTTTTTATTGCATTGTAAAATACCGTTGTATCATAAATACATGTATGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 252079 161 + 74645514 CAAACCAAGAAGCC-AAACATAACCAACCATCTCATCGTCCTGTGCACTCCTCTCTTCCCCCT-------TTCCCCGGCCCCCACCAAGAGGTCACCACTGTCCCTGTCCTAAAGTTTGTACTTTTTATTGCATTGTAAAATACCGTTGTATCATAAATGCACGTATGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 238053 161 + 75148670 caaaccaagaagcc-aaacataaccaaccatctcatcgtcctgtgcactcctctcttccccct-------ttccctggcccccaccaagaggtcaccactgtccctgtcctaaagtttgcactttttattgcagtgtaaaataccgttgtgtcataaatgcatgtatgt i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1065220 168 - 1291538 caaaccaagacgtt-gaacaaaaccaaccacctcatcgtcctgtgtgcccctcccttcccccttcccccattccctggcccccaccaagaggtctccactgtccccatcctaaagtttgcactttttatcatATTGTAAAATATTGCAGTATCATAAATACATGTATGT i calJac3.chrUn_GL286409 C 0 C 0 e panTro4.chr17 357033 1068 + 82630442 M a score=27393.000000 s hg38.chr17_GL383563v3_alt 373774 32 + 375691 taaacagacgtccttttttttt--cttttttaga s ponAbe2.chr17 245798 31 + 73212453 TAAACAGACTTCCTTTTTTTTT---TTTTTTAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 330292 24 - 81552678 taaacagacttcttt----------ttttttaga i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 273896 28 + 80997621 -AAACAGACTTCCTTTTTTT-----TTGGTGGGG i macFas5.chr16 C 0 I 6 s papAnu2.chr16 252240 28 + 74645514 -AAACagacttccttttctc-----ttttttggg i papAnu2.chr16 C 0 I 6 s chlSab2.chr16 238214 27 + 75148670 -aaacagac-tccttttctc-----ttttttggg i chlSab2.chr16 C 0 I 6 s calJac3.chrUn_GL286409 1065388 34 - 1291538 TAAACAGACTTCCttttttttttttttttctgga i calJac3.chrUn_GL286409 C 0 C 0 e rheMac3.chr16 262085 34 + 80904711 I e panTro4.chr17 357033 1068 + 82630442 M a score=1753342.000000 s hg38.chr17_GL383563v3_alt 373806 842 + 375691 gatggagtctcgcactgtcacccagcctggagtgcagtggcacagtctccgctcactgcaacctccccctcctgggttcaagcaattctcctgcctcagcctcccgagcagct--gattataggcatacgctgccatgcccggctaagtttttgtattttagtagaaatggggtttcaccatgttgcccaggctggcctcgaactcctgagctcaggcaatccatctgcctcgacctcccaaagtgctaggattacaggcgtgagccaccgtgcctggcccctttttttaatttaatattgtttccaaggttcatccgtgttgtgggggcatagatcatccttttgctgatgtataatattccatgtgtgactatatcactgagtggttccagctttttgctactatgagctatgctgatatgaacatttttgatggctcctggtgcccatatgcaagaatttcacttggatgtgtC---TTTTTTTTTCTTTCTTAAACATTCAGTTGGTGCCAAGCTTGGGTATATCTTAAGGACTGGGGTTCTCAGAGATCctgccgtcctcaggacactggctctgccttccaattagctcctgtcactgtagcgagatgtttgccacagacccaggcaacacatccatggccgaccgtgcccagcagcagaagaggagcgtgtctcctcctccctttgatgaaggagcaaacctttccctggagcctcaggtagatgatcttgaactctaattggccaggagtgggtaacaggttatttctcaaacatattactgacaaagagaatgggatgaccataatgactccagccaatcaggattcTCTTGTGAAGA s ponAbe2.chr17 245829 805 + 73212453 CACTGAGtct---------------------------------------cgctcactgcaacctccctctcctgggttcaagcaattctcctgcctcagcctcccgagcagct--gattataggcatatgctgccatgcctggctaagtttttgtattttagtagaaatggggtttcaccatgttgcccaggctggcctcgaacttctgagctcaggcaatccatctgcctcgacctcccaaagtgctaggattacaggtgtgagccaccgtgcctggccCCTttttttaatttaatactgtttccaaggttcgtccatgttgtgggggcatagatcatcctttcgctgatgtataatattccacgtgtgactatatcactgagtggttccagctttttgctactacgagctttgctgatatgaacatttttgatggctcctggtgcccatatgcaagaatttcacttgggtgtgtC-TTTTTTTTTTTTTTTCTTAAACATTCAGTTGGTGCCAAGCTTGGGTATATCTTAAGGATTGGGGTTCTCAGAGATCctgccatcctcaggacactggctctgccttccaattagctcctgtcactgtcgcgagatgtttgccacagacccaggcaacacatccatggccgaccgtgcccagcagcagaagaggagcgtgtctcctcctccctttgatgaaggagcaaacttttccctggagcctcaggtagatgatcttcaactctcattggccaggagtgggtaacaggttctttctcaaacataacattgacaaagagaatgggatgaccataacaactctggccaatcaggattcTCTTGTGAAGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 330316 833 - 81552678 cacagagtctcgcactgtcacctaggctggagtgcagtggcacagtctccgccccctgcaacctccccatcctgggttcaagcaattctccttccttagcctcccgagcagct--gattataggcatatgctgccatgcctggctaagtttttgtattttagtagaaatggagtttcaccatgttgcccaggctggcctcgaactcctgagctcaggcaatccatccgcctcgacctcccaaagtgctaggattacaggcatgagccactgtgcctggccctttttttaaatttaatattgtttccaaggttcatccatgttgtggggacatagatcatcctttcgctgatgtataatatttcacgtgtgactatatcacTGAGtggttccagctttttgctaccatgagctttgctgatatgaacatttttgacagctcctggtgcccatatgcaagaatttcacttgggtgtgtC------TTTTTTTTTCCTTAAACATTCAGTTGGTGCCAAGCTCGGGTATATCTTAAGGACTGGGGTTCTCAGAGATCctgccgtcctcaggacactggctcaaccttccaattagcccctgtcactgtggcgagatgtttgccacagacccaggcagcacatccgtggccgaccgtgcccagcagcagaagagaagcgtgt------ctccctttgatgaaggagcagacctttcccgggagcctcAGGTAGATGAGCGTCAACTCTCACTGGCCAGGAGTGGGTAACAGGTTATTTCTCGAACATATCACTGACAAAGAGAATGGGGTGACCACAATGACTCTGGCCAATCGGGATTCTCTTGTGAAGA i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 262119 838 + 80904711 gacggagtctcgcactgtcgcccaggctgaactgcagtggtgcagtctccactcactgcaacctccccctcctgggttcaagcaattctccttccatagcctcctgagcagctgggattataggcacaggctgccatgcctggctgattttttgtattttagtagagatgggctttcactgtgttgcccaggctgtcctcgaactcctgagctcaggcaatccatctgccttgatctcccaaagggctaggattacaggcgtgagccaccgtgcctggACCCTTTttaaaatt------tgtttccaaggttcatccatgttg-aggagcccagatcatcctttagctgatgtataatatcccacgtgggaccacctcactgagtggttccagcttttggctactctgagctttgctgatatgaacatttttgatggct-ctggtgcccatatgcaaaaatttcacttgggtgtgtCTTTTTTTTTTTTTTTTCTTAAACATTCAGTT-GTGCCAAGCATGGGTATATCTTAAGGACTGGGGTTCCCAGAGATCctgccgtcctcagtacaccagcgtggccttccaattagctcctgtcactgtagcgagatgtctgccacagacccaggcagcatatccatggccgaccgtgcccagcagcagaagaggagcatgtctcctcctcccttttaccaaggagcaaagctctcccaagagcctcaggtagatgatcttccactctgattggccaggagtgggtaacaggttccttctcaaacagatcactgacaaagagaatgggacgaccataatgactccgaccgatcaggattctcttgagaaga i rheMac3.chr16 I 34 C 0 s macFas5.chr16 273930 837 + 80997621 gacggagtctcgcactgtcgcccaggctgaactgcagtggtgcagtctccactcactgcaacctccccctcctgggttcaagcaattctccttccatagcctcctgagcagctgggattataggcacaggctgccatgcctggctgattttttgtattttagtagagatgggctttcactgtgttgcccaggctggcctcgaactcctgagctcaggcaatccacctgcctcgatctcccaaagggctaggattacaggcgtgagccaccgtgcctggACCCTTTttaaaatt------tgtttccaaggttcatccatgttg-aggagcccagatcatcctttagctgatgtataatatcccacgtgggaccacctcactgagtggttccagcttttggctactctgagctttgctgatatgaacatttttgatggct-ctggtgcccatatgcaagaatttcacttgggtgtgtC-TTTTTTTTTTTTTTTCTTAAACATTCAGTT-GTGCCAAGCATGGGTATATCTTAAGGACTGGGGTTCCCAGAGATCctgccgtcctcagtacaccagcgtggccttccaattagctcctgtcactgtagcgagatgtctgccacagacccaggcagcatatccatggccgaccgtgcccagcagcagaagaggagcgtgtctcctcctcccttttaccaaggagcaaagctctcccaagagcctcaggtagatgatcttccactctgattggccaggagtgggtaacaggttccttctcaaacagatcactgacaaagagaatgggacgaccataatgactccgaccgatcaggattctcttgagaaga i macFas5.chr16 I 6 C 0 s papAnu2.chr16 252274 835 + 74645514 gacagagtctcgcactgtcacccaggctgaactgcagtggtgcagtctccactcacttcaacctccccctcctgggttcaagcaattctccttccatagcctcctgagcagctgggattataggcacaggctgccatgcctggctaattttttgtattttagtagagatgggctttcactgtgttgcccaggctggcctcgaactcctgagctcaggcaatccatctgcctcgatctcccaaagggctaggattacaggcgtgagccaccgtgcctggcccctttttaaaatt------tgtttccaaggttcatccatgttg-aggAGCACAGATCATCCTTTCGCTGATGTATAATATCCCACGTGTGACTACCTCACTGAGTGGTTCCAGCTTTTTGCTACTCTGAGCTTTGCTGATATGAACATTTTTGATGGCT-CTGGTGCCCATATGCAAGAATTTCACTtgggtgtgtc---tttttttttttttcttaaacattcagTT-GTGCCAAGCGTGGGTATATCTTAAGAATTGGGGTTCCCAGAGATCCTGCCGTCCTCAGTACACCAGCGTGGCCTTCCAATTAGCTCCTGTCACTGTAGCGAGATGTCTGCCACAGACCCAGGCAGCATATCCATGGCCGACCATGCCCAGCAGCAGAAGAGGAACGTGTCTCCTCCTCCCTTTTACCAAGGAGTAAACCTTTCCCAAGAGCCTCAGGTAGATGATCTTCCACTCTGATTGGCCAGGAGTGGGTAACAGGTTCCTTCTCAAACTTTTCACTGACAAAGAGAATGGGATGACCATAATGACTCAGACCAATCAGGATTCTCTTGAGAAGA i papAnu2.chr16 I 6 C 0 s chlSab2.chr16 238247 837 + 75148670 gacggagtctcacactgtcacccaggctgaactgcagtgccacagtctccactcactgcaacctccccctcctgggttcaagcaattctccttccatagcctcctgagcagctgggattataggcacaggctgccaggcctggctacttttttgtatttcagtagagatgggctttcactgtgctgccaaggctggcctcaaactcctgagctcaggcaatccatctgcctcgatctcccaatgggctaagattacaggtgtgagccaccgtgcctggcccctttttaaaatt------tgtttccaaggttcatccatgttg-aggagcatagatcatcctttcgctgatgtgtaatatcccatgtgtgactacatcactgagtggttccagcttttcgctgctctgagctttgctgatatgaacatttttgatggct-ctggtgcccatatgcaagaatttcacttgggtgtgtC-TTTTTTTTTTTTTTTCTTAAACATTCAGTT-GTGCCAAGCATGGGTATATCTTAAGGACTGGGGTTCCCAGAGATCctgccatcctcagtgcaccggcatggccttccaattagctcctgtcactgtagcgagatgtctgccacagacccaggcagcatatccatggccgaccatgcccagcagcagaagaggaacgtgtctcctcctcccttttaccaaggagcaaacctttcccaagagcctcaggtagatgatcttccactctgattagccaggagtgggtaacaggttccttctcaaacatatcactgacaaagagaatgggatgaccataatgactcagaccaatcaggattctcttgagaaga i chlSab2.chr16 I 6 C 0 s calJac3.chrUn_GL286409 1065422 840 - 1291538 gacagagtttcgctttggcacccaggctagagtgcagtggcacaatctctgctcattgcaaccttcacttcccaggttcaagcaatcctcctgccttagcctcccgaatagctgggattacaggcacacgctgccctgcctggctaaatttttgtattttagtagagatggggtttcactgtgttgcccaggctggtcttgaactcctgagctccggcaattcacccacctcaacctcccaaagtgctgggattacaggc-tgagccactgcgcctgg-cccttttttaaatgtaatatttcttccaagg-tcatccatgttgtggcagcatagtccatcctttccctgatgtataatattccacatgtgactacatcactgagtggttctggctttttgctactatgagctttgctgatatgaacattcttgtcagcttctcatgtccatatgcgagaatttcacgtgtgtatgtGTGTGTGTGTATTTTTTCTTAAACATTCAGTTGGTACCAAGCTTCGGTATATCTTAAGGACTAGAAGTCCCAAAGATtctcccatcctcagtaccttggccttgccttccaatcagctcctgtcactgtagcaggatgtttgccgcagaccccagcagcatccgaatg--caatggtgcccagcagcaggagaggaaaatgtctcctctttccttt-accacagagcaaaccttccccaggaggtgccaggagatgttcttgaacccttgttggccaggagtaggtaacaggttccttctcaaacacatcactgatacagag-atgggatgactgtaatggctcagaccaatagggattcTCTCGAGAGGT i calJac3.chrUn_GL286409 C 0 C 0 e panTro4.chr17 357033 1068 + 82630442 M a score=423412.000000 s hg38.chr17_GL383563v3_alt 374648 162 + 375691 TACGGGGC-GGCTGTAGGTGGGCACAGGGACCAGAACAAGATCAGAGCTCTGCAGGAAGGGGGCAAAGGTTGGGTGGGCAATTGCAGCTGACAATGTCTTCTCCACCTCCATCCCCCGCCATTCCCCTCTACCTGCAGAAAGCTTCTTCC---AGACACCTGTGAC s panTro4.chr17 358105 165 + 82630442 TACGGGGC-AGCTGTAGGTGGGCACAGGGACCAGAACAAGATCAGAGCTCTGCAGGAAGGGGGCAAAGGTTGGGTGGGCAATTGCAGCTGACAATGTCTTCTCCACCTCCATCCCCCGCCATTCCCCTCTACCTGCAGAAAGCTTCTTCCTCCAGACACCTGTGAC i panTro4.chr17 M 1068 C 0 s ponAbe2.chr17 246634 166 + 73212453 TACGGGGCAGGCTGTCGGTGGGCACAGGGACCAGAACAAGATCAGAGCTCTGCAGGAAGGGGGCAAAGGTTGGGTGGGCAATTGCAGCTGACAATGTCTTCTCCACCTCCATCCCCCGCCATTCACCTCTACATGCAGAAAGCTTCTTCCTCCCGACACCTGTGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331149 166 - 81552678 TACGGGGCAGGCTGCAGGTGGGCACAGGGACCAGAACAAGATCAGAGCTCTGCAGCAGGGGGGCAAAGGTTGGGCGGGCGATTGCAGCTGACAATGTCTGCTCCACCCCCATCCCCTGCCATTGACCTCTACATGCAGAACGCTTCTTCCTCCAGACACCTGTGAC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 262957 165 + 80904711 cacaagccaggctgtaggtggacacagggaccagaacaaggtcagagctc-acaggaagggggcaaaggctgggtgggtaattgcagccgacagtgtctgcTCTATCCCCATCCCCCACCATTCACCTCCACGTGCTGAAAGCTTCTTCCTCCAGACACCTGGGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 274767 165 + 80997621 cacaagccaggctgtaggtggacacagggaccagaacaaggtcagagctc-acaggaagggggcaaaggctgggtgggtaattgcagccgacagtgtctgctccaTCCCCATCCCCCACCATTCACCTCCACGTGCTGAAAGCTTCTTCCTCCAGACACCTGGGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253109 166 + 74645514 CACAAGGCAGGCTGCAGGTGGACACAGGGACCAGAACAAGGTCAGAGCTCTGCAGGAAGGGGGCAAAGGTTGGGTGGGTAATTGCAGCCAACAGTGTCTGCTccatccccatcccccaccatTCACCTCCAAGTGCTGAAAGCTTCTTCCTCCAGACACCTGGGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239084 165 + 75148670 cacaaggcaggctgtaggtggacacagggaccagaacaaggtcagagctc-gcaggaaggatgcaaaggttgggtgggtaattgcagccgacaatgtctgctccaTCCCCATCCCCCACCATTCACCTCCACGTGCTGAAAGCTGCTTCCTCCAGACACCTGGGAC i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1066262 152 - 1291538 CACCAGGCAGGCTGCAGGT---------GACCAGAACAAGACCAGAGCTCTGCAGGAAGGGGGCAAAAAGTGGGTGAGCACCTGCAGCCACTGGTGTCTGCTCCATCTTCATGCCC--CCATT--CCTCCGCATGCAGAGAGCTTTTTCCTGCAAACACC-GTGAC i calJac3.chrUn_GL286409 C 0 I 938 a score=76225.000000 s hg38.chr17_GL383563v3_alt 374810 35 + 375691 TCTGCCTGAGGCTTTTCTCCACTTGCATTTTTGGC s panTro4.chr17 358270 35 + 82630442 TCTGCCTGAGGCTTTTCTCCACTTGCATTTTTGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 246800 35 + 73212453 TCTGCCTGGGGCTTTTCTCCAGTTGCATGTTTGGC i ponAbe2.chr17 C 0 I 7 s nomLeu3.chr19 331315 35 - 81552678 TCTACCTGAGGCTTTTCTCCAGTTGCATTTTTGGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 263122 34 + 80904711 TCTGCCTGAGGC-TTTCTCCAGTTGCATTTGTGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 274932 34 + 80997621 TCTGCCTGAGGC-TTTCTCCAGTTGCATTTGTGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253275 34 + 74645514 TCTGCCTGAGGC-TTTCTCCAGTTGCATTTTTGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239249 34 + 75148670 TCTGCCTGAGGC-TTTCTCCAGTTGCATTTTTGGC i chlSab2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I a score=49064.000000 s hg38.chr17_GL383563v3_alt 374845 29 + 375691 CCACGCAGAAGAAGCCAGAAGTGCTACAG s panTro4.chr17 358305 29 + 82630442 CCACGCAGAAGAAGCCAGAAGTGCTACAG i panTro4.chr17 C 0 C 0 s nomLeu3.chr19 331350 29 - 81552678 CCACACAGAAGAAGCCAGAAGTGCTACAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 263156 29 + 80904711 CCACACAGAAGAAGCTAGAAGTACTACAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 274966 29 + 80997621 CCACACAGAAGAAGCTAGAAGTACTACAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253309 28 + 74645514 CCACGCAGAAAAAGCCAG-AGTGCTACAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239283 29 + 75148670 CCACGCAGAAGCAGCCAGAAGTGCTACAG i chlSab2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I e ponAbe2.chr17 246835 7 + 73212453 I a score=14938.000000 s hg38.chr17_GL383563v3_alt 374874 6 + 375691 AGTTAG s panTro4.chr17 358334 6 + 82630442 AGTTAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 246842 6 + 73212453 GGTTAG i ponAbe2.chr17 I 7 C 0 s nomLeu3.chr19 331379 6 - 81552678 AGTTAG i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 263185 6 + 80904711 AGTTAG i rheMac3.chr16 C 0 I 1632 s macFas5.chr16 274995 6 + 80997621 AGTTAG i macFas5.chr16 C 0 I 39 s papAnu2.chr16 253337 6 + 74645514 AGTTAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239312 6 + 75148670 AGTTAG i chlSab2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I a score=66796.000000 s hg38.chr17_GL383563v3_alt 374880 46 + 375691 TGCCTCTAGAAGCCACGTTTTCTGAGAGGTGGTGGATAATACCCAG s panTro4.chr17 358340 46 + 82630442 TGCCTCTAGAAGCCACGTTTTCTGAGAGGTGGTGGATAATACCCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 246848 46 + 73212453 GACCTCCAGAAGCCACCTTTTCTGAGAGTTGGTGGATAATACCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331385 46 - 81552678 AACCTCCAGAAGCCAGCTTTTCTGAGAGGCGGTGGGTGACACCCAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 275040 46 + 80997621 CACCTCCGGAAGCCGCCTTTTCCCAGAGGTGGAGGGTGACACCCAG i macFas5.chr16 I 39 C 0 s papAnu2.chr16 253343 46 + 74645514 CACCTCCGGAAGCCACCTTTTCTCAGAGGTGGTGGATGACAGCCAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239318 46 + 75148670 TCCCTCCAGAAGCCACCTTTTCTCAGAGGTGGTGGATGACACCCAA i chlSab2.chr16 C 0 T 16 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I e rheMac3.chr16 263191 1632 + 80904711 I a score=45974.000000 s hg38.chr17_GL383563v3_alt 374926 61 + 375691 C----------------------------TTCTGAG---------------------AGGTGGTGGATAATACCCAGCTTCTGAGA-------GGTGATACCCAGCTTCTGAGGGGC s panTro4.chr17 358386 61 + 82630442 C----------------------------TTCTGAG---------------------AGGTGGTGGATAATAACCAGCTTCTGAGA-------GGTGATACCCAGCTTCTGAGGGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 246894 40 + 73212453 C----------------------------TTCTGAG---------------------GGGCGGCG----------------------------GGTGACACCCAGCTTCTGAGGGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331431 89 - 81552678 C----------------------------TTCTGAGAGGCGGTACCCAGCTTCTGAAAGGTGGTGTGTGATACCCAGCTTCTGAGAGGTGGTGGGTGACGCCCAGCTTCTGAGAGGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 275086 96 + 80997621 CTTCTGAGAGGTGGAGGGTGACACTCAGTTTCTGAG---------------------AGGTGGAGGGTGACACTCAGTTTCTGAGAGGTGGAGGGTGACACCCAGCTTCTGAGAGGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253389 68 + 74645514 C----------------------------TTCTGAG---------------------AGGTAGAGGGTGACACCCAGCTTCTGAGAGGCGGTGGGTGATACCCAGCTTCTGAGAGGC i papAnu2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I e chlSab2.chr16 239364 16 + 75148670 T e rheMac3.chr16 263191 1632 + 80904711 I a score=156822.000000 s hg38.chr17_GL383563v3_alt 374987 109 + 375691 GGTGGGTGACACCCAGCTTCTGAGAGGCGGTGGGTGACACCCCGCTT--------------------------------CTGAGAGGTGGTGGGTGACA----------------------------CCCCGCTTCTGAGAGGTGGTGGGTGATACCCAGCTTCTGAGA s panTro4.chr17 358447 109 + 82630442 GGTGGGTGACACCCAGCTTCTGAGAGGTGGTGGGTCATACCCAGCTT--------------------------------CTGAGAGGTGGTGGGTCATA----------------------------CCCAGCTTCTGAGAGGTGGTGGGTCATACCCAGCTTCTGAGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 246934 109 + 73212453 GGCGGGTGACACCCAGCTTCTGAGGGGCGGCGGGTGACACCCAGCTT--------------------------------CTGAGGGGCGGCGGGTGACA----------------------------CCCAGCTTCTGAGGGGCGGCGGGTGACACCCAGCTTCTGAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331520 141 - 81552678 CGTGGGCAATGCCCAGCTTCTGAGAGGCAGTGGGAGACGCCCAGCTTCCCTGAGAGGTGGTGGGTGATGCCCAGCTTCCCTGAGAGGTGGTGGGTGACG----------------------------CCCAGCTTCTGAGAGGTGGTGGGTGATACCCAGCTTCTAAGG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 275182 109 + 80997621 GGAGGGTGACACTCAGTTTCTGAGAGGTGGAGGGTGACACTCAGTTT--------------------------------CTGAGAGGTGGAGGGTGACA----------------------------CTCAGTTTCTGAGAGGTGGAGGGTGACACCCAGCTTCTGAGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253457 137 + 74645514 GGTGGGTGCCACTCAGTTTCTGAGAGGTGGTGGGTGATGCCCAGCTT--------------------------------CTGAGAGGCGGTGGGTGACAACCAGCTTCTGAGAGGCGGTGGGTGATGCCCAGCTTCTGAGAGGCGGTGGGTGATACCCAGCTTCTGAGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239348 109 + 75148670 GGTGGATGACACCCAACTTCTGAGAGGTGGAGGGTGCTACCCAGCTT--------------------------------CTGAGAGGTGGTGGGTGATG----------------------------CCCAGCTTCTGAGAGGTGGTGGGTGCTAACCAGCTTCTGAGA i chlSab2.chr16 T 16 T 93 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I e rheMac3.chr16 263191 1632 + 80904711 I a score=6542.000000 s hg38.chr17_GL383563v3_alt 375096 12 + 375691 GGTGGTGG-------------------------------------TCAG s panTro4.chr17 358556 47 + 82630442 GGTGGTGGGTCATACCCAGCTT--CTGAGAGGTGGTGGGTGATACCCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 247043 19 + 73212453 GGCGGCGG------------------------------GTGACACCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331661 49 - 81552678 GGCGGTGGGTGACACCCAGCTTCCCTGAGAGGTGGTGGGTGACGCCCAG i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 275291 19 + 80997621 GGTGGAGG------------------------------GTGACACTCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253594 19 + 74645514 GGCGGTGG------------------------------GTGCCACTCAG i papAnu2.chr16 C 0 C 0 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I e chlSab2.chr16 239457 93 + 75148670 T e rheMac3.chr16 263191 1632 + 80904711 I a score=90522.000000 s hg38.chr17_GL383563v3_alt 375108 78 + 375691 CTTCTGAGAGGTGGTGGGTGATACCCAGCTT------------------------------CTGAGAGGTGGTGGGTGATACCCAGCTGCTGAGAGGTGGTGG-----------------------------------TCAGC s panTro4.chr17 358603 78 + 82630442 CTTCTGAGAGGTGGTGGGTGATACCCAGCTT------------------------------CTGAGAGGTGGTGGGTGATACCCAGCTTCTGAGAGGTGGTGG-----------------------------------TCAGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 247062 57 + 73212453 CTTCTGAGGGGCGGTGGGTGACACCCAGCTT------------------------------CTGAGGGGTGGCGGGTAATA---------------------G-----------------------------------CCAGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331710 143 - 81552678 CTTCTGAGAGGTGGTGGGTGATACCCAGCTTCTAAGGGGCAGTGGGTGACACTCAGCTTCCCTGAGAGGTGGTGGGTGATACCCAGCTTCTGAGAGGTGGTGGGTGATACCCAGCTTCTAAGGGGCGGTGGGTGACGCCCAGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 275310 85 + 80997621 TTTCTGAGAGGTGGAGGGTACTACCCAGCTT------------------------------CTGAGAGGCGGTGGGTGATGCCCAGCTTCTGAGAGGCGGTGGGTACTAC----------------------------CCAGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253613 85 + 74645514 TTTCTGAGAGGTGGTGGGTGATGCCCAGCTT------------------------------CTGAGAGGCGGTGGGTGACAACCAGCTTCTGAGAGGCGGTGGGTGATGC----------------------------CCAGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239364 68 + 75148670 CTTCTGAGAGGTGGAGGGTGCTACCCAGCTT------------------------------CTGAGAGGTGGTGGGTGATGCCCAGCTTCTGAGAGGT--------------------------------------------- i chlSab2.chr16 T 93 C 0 e calJac3.chrUn_GL286409 1066414 938 - 1291538 I e rheMac3.chr16 263191 1632 + 80904711 I a score=16983.000000 s hg38.chr17_GL383563v3_alt 375186 11 + 375691 TT--CTGAGAGGT s panTro4.chr17 358681 11 + 82630442 TT--CTGAGAGGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 247119 11 + 73212453 TT--CTGAGAGAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331853 13 - 81552678 TTCCCTGAGAGGC i nomLeu3.chr19 C 0 C 0 s macFas5.chr16 275395 11 + 80997621 TT--CTGAGAGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 253698 11 + 74645514 TT--CTGAGAGGC i papAnu2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1067352 11 - 1291538 tt--ctgagaggt i calJac3.chrUn_GL286409 I 938 C 0 e chlSab2.chr16 239432 0 + 75148670 C e rheMac3.chr16 263191 1632 + 80904711 I a score=31477.000000 s hg38.chr17_GL383563v3_alt 375197 12 + 375691 GGTGGGTGACAC s panTro4.chr17 358692 12 + 82630442 GGTGGGTGACAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 247130 12 + 73212453 GGTGGGTGATAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331866 12 - 81552678 GGTGGGTGATGC i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 264823 12 + 80904711 ggtgggtgaTAA i rheMac3.chr16 I 1632 C 0 s macFas5.chr16 275406 12 + 80997621 GGTGGGTGACAC i macFas5.chr16 C 0 I 976 s papAnu2.chr16 253709 12 + 74645514 GGTGGGTGATAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239432 12 + 75148670 GGTGGGTGCTAA i chlSab2.chr16 C 0 C 0 s calJac3.chrUn_GL286409 1067363 12 - 1291538 ggtggataacac i calJac3.chrUn_GL286409 C 0 C 0 a score=1285601.000000 s hg38.chr17_GL383563v3_alt 375209 477 + 375691 CCAGCTTCTGAGAagcttcgttgcccctcacttgggatcactggcatgttttggcaccgcctcccagagtcctcccagaggactgagctgtggttgagcacagag-------------------------gtagctggcaggataatgaaaactttattaactgtcctgccttccctgtctcacttgcccactcctccacccgtgtttcctaagaccctctcgcagataaactct--gcactcaattcctagtcttagagtttgcatttgggggaactcaaacaaacacaACAACCAACACAGCAGCCAACAGTCCCTGTGCCAGGGATGTGTGAGCAAGATGGGAGACTGGGTTGGATGCTGGATAGATGGGCTGTTggctaaggatagaaaattagaagtcatcagcatgtaggacatgattgcagctgtgaatgtagatgagaatacctt-----aatatacagacagagcttcaagaacagagtccttaggcCAAGCTCGGAAAA s panTro4.chr17 358704 477 + 82630442 CCAGCTTCTGAGAagcttcgttgcccctcacttgggatcactggcatgttttggcaccgcctcccagagtcctcccagaggactgagctgtggttgagcacagag-------------------------gtagctggcaggataatgaaaactttattaactgtcctgccttccctgtctcacttgcccactcctccacccgtgtttcctaagaccctctcccagataaactct--gcactcaattcctagtcttagagtttgcatttgggggaactcaaacaaacacaACAACCAACACAGCAGCCAACAGTCCCTGTGCCAgggatgtgtgagcaagatgggagagtgggttggatgttggatagatgggctgttggctaaggatagaaaattagaagtcatcagcacataggacatgattgcagctgtgaatgtagatgagaatacctt-----aatatacagacagagcttcaagaacagagtccttaggccaagctcggaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 247142 477 + 73212453 CCAGCTTCTGAGAagcttcgttgcccctcacttgggatcaccggcatgctttggcaccgcctcccagagtcctcccagaggactgagctgtggttgtgcacagag-------------------------gtagctggcaggatagtgaaaactttattaactgtcctgccttccctgtctcacttgtccactcctccacccgtgtttcctaagaccctctcccagataaactcc--acactcaattcctcgtcttagagttggcatttgggggaactcaaacaaacacaACAACCAACACAGCAGCCAACAGTCCCTGTCCCAGGGATGTGTGAGCAAGATGGGAGGCTgagttggatgttggatagatgggctgtcggctaaggatagaaaattagaagtcatcagcatgtaggacatgatcgtatctgtgagtgtagatgagaatacctt-----aatacacagacagagcttcaagaacagagtccttaggccaagctcggaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr19 331878 475 - 81552678 CCCGCTTCTGAGAGgcttcgttgcccctcacttgggatcactggcgtg-tttggcaccacctcccagagtcctcccagaggactgagctgtggttgtgcacagag-------------------------gtagttggcaggataatgaaaactttattaactgtcctgccttccctgtctcacttgtcgactcctccacccgtgtttcctaagaccctctcccaggtaaactct--gcactcaattcctagtcttagagtttgcgtttgggggaactcaaacaaacacaACAACCAACACAGCAGCCAA-AGTCCCTGTGCCAGGGATGTGTGAGCAAGATGGGAGGCTGGGTTGGATGTTGGATAGATGGGCTGTCggctgaggatagaaaatgagaagtcatcagcatgtaggacatgattgcagctgtgagtgtagataagaatacctt-----aatatgcagacagagcttcaagaacagagcccttaggccaagctcggaaaa i nomLeu3.chr19 C 0 C 0 s rheMac3.chr16 264835 460 + 80904711 CCAGCTTCTGAGAagcttcgtcgcccctcacttggggtcactggcatg-tttg-----gcctccca-agtcctcccagaggactgagctgtggttacgcacagag-------------------------gtagctggcaggataatgaaaactttattaactgtcctgccttccctgtctcactcaccgactcctccacccatgtttcctaagaccttctcccagataaactct--gcactcaattcctaatcttagagtttgcatttgggggaactcaaacaaacacaACAACCAACACAGCAGCCAACAGTCTGTGTGCCAGGGATGTGTGAATAAGATGGGAGGCTGGGctggatgttggatagatgggctgtcggctaaggatagaaaattagaagtcatcagcatgtaggacatgattgcagctttgagtgcagatg---------------aatagacagacagagcttcatgaacagagtccttacgccaagctcagaaaa i rheMac3.chr16 C 0 N 0 s macFas5.chr16 276394 460 + 80997621 CCAGCTTCTGAGAagcttcgtcgcccctcacttggggtcactggcatg-tttg-----gcctccca-agtcctcccagaggactgagctgtggttacgcacagaa-------------------------gtagctggcaggataatgaaaactttattaactgtcctgccttccctgtctcacttaccgactcctccacccacgtttcctaagaccttctcccagataaactct--gcactcaattcctaatcttagagtttgcatttgggggaactcaaacaaacacaACAACCAACACAGCAGCCAACAGTCTGTGTGCCAGGGATGTGTGAATAAGATGGGAGGCTGGGctggatgttggatagatgggctgtcggctaaggatagaaaatcagaagtcatcagcatgtaggacatgattgcagctttgagtgcagatg---------------aATAGACAGACAGAGCTTCAAGAACAGAGTCCTTACGCCAAGCTCAGAAAA i macFas5.chr16 I 976 C 0 s papAnu2.chr16 253721 488 + 74645514 CCAGCTTCTGAGAAGCTTCGTCACCCCTCACTTGGGGTCACTGGCATG-TTTGGCACCGCCTCCCA-AGTCCTCCCAGAGGACTGAGCTGTGGTTGCGCACAGAGGACTGAGCTGTGGTTGCACACAGAAGTAGCTGGCAGGATAATGAAAACTTTATTAACTGTCCTGCCTTCCCTGTCTCACTTACCCACTCCTCCACCCATGTTTCCTAAGACCTTCTCCCAGATAAACTC----CACTCAATTCCTAATCTTAGAGTTTGCATTTGGGGAAACTCAAACAAACACAACCACCAACACAGCAGCCAACAGTCTGTGTGCCAGGGATGTGTGAGTAAGATGGGAGGCTGGGCTGGATGTTGGATAGATGGGCTGTCGGCTAAGGATAGAAAATTAGAAGTCATCAGCATGTAGGACATGATTGCAGCTTTGAGTGTAGATA---------------AATAGACAGACAGAGCTTCAAGAACAGAGTCCTTACGCCAAGCTCAGAAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 239444 461 + 75148670 CCAGCTTCTGAGAagcttcgtcgcccctcacttgggatcactggcatg-tttggcactgcctccca-agtcctcccagaggactgagctgtggttgcgcacagaa-------------------------gtagctggcaggataatgaaaactttagtaactgtcctgccttccctgtctc----acccactcctccactcatgtttcctaagaccctctcccagataaactct--gcactcaattcctaatcttagagtttgcattggggggaactcaaacACACACAACCACCAACACAGCAGCCAACAGTCTGTGTGCCAGGGATGTGTGAGTAAGATGGGAGGCTGGGTTGGATGTTGGCTAGATGGGCTGTTggctaaggatagaaaattagaagtcatcagcgtgtaggacatgattgcagctttgagtgcagatg---------------aatagacagacagagcttcaagaacagagtccttatgccaagctcagaaaa i chlSab2.chr16 C 0 N 0 s calJac3.chrUn_GL286409 1067375 434 - 1291538 ------------cagcttcagcacctctcccttgggatcactgacatg-ttcttcaccatctcccagagttctcccagaggactgagctgtggctgcacacagag-------------------------ggagctggcaaaatcatgaaaactgtattaactgtcctgccttccccacctcacatatccactcctccacccacg-ttcctaagatcctctcccaaataaactcttcacactcaattcctagtcttagagtgtgcatttgagggaacctgaacaaacacaACAACCCACATAGCAGCCAGCAGTCTCTGCATCAGGTGTgtctgagcaagatgggagtctgggttggatgttgga------agacgttgg-----------------------------gtataggatgtgattgcagcagtgagtgtagatgagaataccttaagaaaatatacagacagagcttcaagaacagagtccttaggcc-agctcagaaga i calJac3.chrUn_GL286409 C 0 N 0 a score=4283.000000 s hg38.chr17_GL383563v3_alt 375686 5 + 375691 CACCA s panTro4.chr17 359181 5 + 82630442 cacca i panTro4.chr17 C 0 N 0 s ponAbe2.chr17 247619 5 + 73212453 cgcca i ponAbe2.chr17 C 0 N 0 s nomLeu3.chr19 332353 5 - 81552678 ggcca i nomLeu3.chr19 C 0 N 0 s macFas5.chr16 276854 5 + 80997621 GGCCA i macFas5.chr16 C 0 N 0 s papAnu2.chr16 254209 5 + 74645514 GGCCA i papAnu2.chr16 C 0 N 0