##maf version=1 scoring=roast.v3.3 a score=4230.000000 s hg38.chr17_GL383566v1_alt 0 3 + 90219 CTA s panTro4.chr17 76210479 3 + 82630442 cta i panTro4.chr17 N 0 C 0 s macFas5.chr16 74609552 3 + 80997621 cta i macFas5.chr16 N 0 C 0 s papAnu2.chr16 68614570 3 + 74645514 CTA i papAnu2.chr16 N 0 C 0 s chlSab2.chr16 30667692 3 - 75148670 cta i chlSab2.chr16 N 0 C 0 s calJac3.chr5 126494299 3 + 159171411 cta i calJac3.chr5 N 0 C 0 a score=16585.000000 s hg38.chr17_GL383566v1_alt 3 10 + 90219 Tacagtacca s panTro4.chr17 76210482 10 + 82630442 tacagtacca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67308378 10 + 73212453 tacagtacca i ponAbe2.chr17 N 0 C 0 s macFas5.chr16 74609555 10 + 80997621 tgcagtacca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68614573 10 + 74645514 TGCAGTACCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30667695 10 - 75148670 tacagtacca i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126494302 10 + 159171411 tactgtatca i calJac3.chr5 C 0 C 0 a score=1191499.000000 s hg38.chr17_GL383566v1_alt 13 531 + 90219 agggaggatggtgcattagtccatcctcattctgctaataaggacatacccaagactgggtaacttataaacagaaaaggcttaattgagtcccagttcagcatggcttgggaggcctcaggaaactt-acaaccatggcagaaggggaagcaaacacatgtccttctccacatggcagcaggaaggagaagtacagaatgaaagtggggaaagccccttataaaaccatcagatctcatgagaactaactcaatatcatgagaacagcatgggggaactgcctccatgatccaattgcctcccactgggtccctctcaccacggg-----tggggattatgagatttgggtggggacacagccaaaccatattagatggtgctaagccattcatgagaatgccacctgcataatc----cagtcacctcccaccaggccccaccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCAGTTTACACCCAAGAGTGAAGCCAAGCAA s panTro4.chr17 76210492 531 + 82630442 agggaggatggtgcattagtccatcctcattctgctaataaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtcccagttcagcatggcttgggaggcctcaggaaactt-acaaccatggcagaaggggaagcaaacacatgtccttctccacatggcagcaggaaggagaagtacagagtgaaagcggggaaagccccttataaaaccgtcagatctcatgagaactaactcaatatcatgagaacagcatgggggaactgcctccatgatccaattgcctcccactgggtccctctcaccacggg-----tggggattatgagatttgggtggggacacagccaaaccatattagatggtgctaagccattcatgagaatgccacctgcataatc----cagtcacctcccaccaggccccaccttcaacactgggaattacaattcaaaatgagatttgggtggggacatggatccaaaccgtatcaGCCAGCTTACACCCAAGAGTGAAGCCAAGCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67308388 532 + 73212453 agggaggatggtgtattagtccatcctcattctgctaataaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtctcagttcagcatggcttgggaggcctcaggaaacttaacaatcatggcagaaggagaagcaaacacatgtccttctccacatggcagcaggaaggagaggtacagagtgaaagcagggaaagccccttataaaaccatcagatctcatgagaactaactcagtatcatgagaacagcatgggggaactgcccccatgctccagttgcctcccactgggtccctctcaccacggg-----tgggtattatgagatttgggtggggacacagccaaaccatattagatggtgctaagccattcatgagaatgccacctgcataatc----cagtcacctcccaccaggccccaccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCAGTTTACACCCAAGAGTGAAGCCAAGCAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74800785 527 + 80904711 agggggaatggtgtattagtccatcctcgttctgc---taaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacacaggcc---ctccacatggcagcagga---agaaatacagcgtgagggcggggaaagccccttgtaaaaccatcagatctcatgagaactaactcaatatcatgagaacagcatggaggaactgcccgcatgatcccgttgcctcccactgggtcccactcaccacggggactatggggattacgagatttgggtggggacacagccaaaccatattagatggtactgagccattcacgggaataccacctgcagaatc----cagtcacctcccgccaggccctgccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCCGTGTACACCCAAGAGTGAAGTCAAGCAG i rheMac3.chr16 N 0 C 0 s macFas5.chr16 74609565 527 + 80997621 agggggaatggtgtattagtccatcctcgttctgc---taaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacacaggcc---ctccacatggcagcagga---agaaatacagcgtgagggcggggaaagccccttgtaaaaccatcagatctcatgagaactaactcaatatcatgagaacagcatggaggaactgcccgcatgatcccgttgcctcccactgggtcccacacaccacggggactatggggattacgagatttgggtggggacacagccaaaccatattagatggtactgagccattcacgggaataccacctgcagaatc----cagtcacctcccgccaggccctgccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCCGTGTACACCCAAGAGTGAAGTCAAGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68614583 527 + 74645514 AGGGGgaatggtgtattagtccatcctCGTTCTGC---Taaggacatacccgagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacacaggCC---Ctccacatggcagcagga---agaagtaCAGCGTGAAGGCGGGgaaagccccttgtaaaaccgtcagatctcatgagaactaactcaatatcatgagaacagcatggaggaactGCCCGCATGATCCTgttgcctcccactgggtcccactCACCACGGGGACTATGGGGAttacgagatttgggtggggacacagccaaaccatattagatgGTACTGAGCCATTCACAGGAATACCACCTGCAGAATC----CAGTCACCTCCCGCCAGGCCCtgccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcagcccgTGTACACCCAAGAGTGAAGTCAAGCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30667705 530 - 75148670 agggggaatggtgtattagtccatcctcgttctgc---taaggacatacccgagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacagaggcc---cttcacatggcagcagga---agaagtacagcgtgaaggcgcagaaagcctcttgtaaaaccgtcagatctcatgagaactaactcaatatcatgagaacagcatggagcaactgcccgcatgatcccgttgcctcccactgggtcccactcaccacggggactatggggattatgagatttgggtggggacacagccaaaccatattagatggtgctgagccattcacgagaataccacctgcagaatccagtcagtcacctcccgccaggccctg-cttcaacactggggattacagttcaaaatgatatttgggtggggacatggatccaaaccatatcaGCCCGTGTACACCCAAGAGTGAAGTCAAGCAA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126494312 517 + 159171411 agaaagagtggtgtatttgtccgtcctcattctgcta-aaaggacatacccaagactgggtaacttataaatgaaaaatgtttaattgactcacagttcagcatggcaggggaggcctgaggaaactt-acagtcatggcaaaaggggaagcaaac----gtccttcttcacatgacagtggga---agaagtacagcgtggaggcggggaaagccccttatgaaaccctcacatctcatgagaactaactcaatatcatgagaacagcatgggggaactgctcctatgatccaattacttcccactgggtccctctcaccacagg-----tggggactatgggatttgggtagggacacagccaaaccatatcagatggtgctaagccattcatgagaatgccaccagc----------cagtcacctcccagtcagccccgccttcaacactggggattgcaattcaaaatgagatttgacaggggacgtggatccaaaccatattaGCTGGTTTACACCCAAGAGTGAAGCCAAGCAA i calJac3.chr5 C 0 C 0 a score=477841.000000 s hg38.chr17_GL383566v1_alt 544 197 + 90219 CAGCCCCCTAAGGCGGAGGCCCCTGGAGGTAGTCCTGGCTCT-GCCAAGAGTCACTCCTCCTCTGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTGCCCCCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-GGGGGGAGACCCTCCAGCCCTCA-----TGTCCACTGGA s panTro4.chr17 76211023 197 + 82630442 CAGCCCCCTAAGGCGGAGGCCCCTGGAGGTAGTCCTGGCTCT-GCCAAGAGTCACTCCTCCTCTGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTGCCCCCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-GGGGGGAGACCCTCCAGCCCTCA-----TGTCCACTGGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67308920 196 + 73212453 CAGCTCCCTAAGGTGGA-GCCCCCGGAAGTGGTCCTGGCTCT-GCCAAGAGTCACTCCTCCCCTGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTGCCCCCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-AGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74801312 196 + 80904711 CAGCCCCCTAAGGTGGAGCCCTCTGGAGGTGGCCCTGGCTCT-GCCAAGAGCCACTCCT-CCCCGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGCTCTGCCCTTGGAGTCAGAGCCACGGGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610092 196 + 80997621 CAGCCCCCTAAGGTGGAGCCCTCTGGAGGTGGCCCTGGCTCT-GCCAAGAGCCACTCCT-CCCCGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGCTCTGCCCTTGGAGTCAGAGCCACGGGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615110 197 + 74645514 CAGCCCCCTGAGGTGGAGCCCTCTGGAGGTGACCCTGGCTCT-GCCAAGAGCCACTCCTGCCCTGGCACTATCCTGTG-------------------TCTCTTATAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGCTCTGCCCTTGGAGTCAGAGCCACgggggggAGATCCTCCAGCCCTCA-----TGTCCACTGGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668235 195 - 75148670 CAGCCCCCTAAGGCGGAGCCCTCTGGAGGTGGCCCTGGCTCT-GCCAAGAGCCACTCCT-CCCCGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGTTCTGCCCTTGGAGTCAGAGCCAC-GGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126494829 200 + 159171411 CAGCTCCCCAAGGTGGAGCCCTCTGGAGGTGATCCTGGTTCT-GCCAAGAGCCACTCCTCCCCTGGCACCATCCTGTG-------------------TCTCTCGTAACCTGGCTGAAGCTCTCAGAGA-TGGGGCAGTGACAGCTTTGG-CTTCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-AGGGGGAAATCCTCCAGCCTGCGTGCTTTGCCTACTGGT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57394411 193 - 61074082 CGGCCCCCT---------GCCGCTGACAGTGGTCACCGCCCTGGCCGGGAAT--GTCCTCCCCCGATGCCACCTTGTGGCCACATTGCAGACACGCATCCCCCGTCCCCC-GCTGGGGC-------GGTGATGACGATGACGTCCTTTC-----TCCAGCTCTACCCTGCAAGTCAGAGCCAT-GGGTGGAGATTCTCCAGCCCTTG-----TGTCTCCTAAA i canFam3.chr9 N 0 I 113 a score=696319.000000 s hg38.chr17_GL383566v1_alt 741 319 + 90219 GTCCTACCCGGGTCCCTTTTTTTGTGTGTGGGTTGTTGGTTCGtttgttttttcttgatatggagtttcactcttgtctcccaggctggagtgaaatggcgcgatcttggctcactgcaacctctgcttcctgggttcaagtgattctcctgcctcagcctcttgagtatctgggattacagtcacctgccaccactcccggctaattttgtata-tttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccatctcggcctcccaaagtgctgggattacagg s panTro4.chr17 76211220 319 + 82630442 GTCCTACCTGGGTCCCTTTTCTTGTGTGTGCGTTGTTGGTTCGtttgttttttcttgatatggagtttcactcttgtctcccaggctggagtgaaatggcgccatcttggctcactgcaacctctgcttcctgggttcaagtgattctcctgcctcagcctcttgagtgtctgggattacagtcacctgccaccactcccggataattttgtata-tttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggattacagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309116 315 + 73212453 GTCCTACCTGGGTCCCTTTTTTTGTGTGTGGGtt----ttttgtttgttttttcttgatatggagtttcactcttgtcacccaggctggagtgaaatggcgcgatcttggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcttgagtatctgggattatagtcacctgccaccactccctgctaattttttata-tttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacgtcaggtgatccacctgcctcggcctcccaaagtgctaggattacagg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74801508 319 + 80904711 GTCTTACCTGGGTCCCTTTTTTGGGGTGTGGAGtttttgtttgtttgttttttattgatacggagtttcactcttgtcacccaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccgggttcaagtgattctcctgcctcagcctcttgagtagctgggattacagtcacctgccaccactcccagctaatcttttata-gttttagtacagacggggtttcaccatgttggccaggctggtctcaaactcccgtccccaggtgatccatccacctcggcctcccaaagtcctgggattgcagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610288 319 + 80997621 GTCTTACCTGGGTCCCTTTTTTTGTGTGTGGAGtttttgtttgtttgttttttattgatacggagtttcactcttgtcacccaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccgggttcaagtgattctcctgcctcagcctcttgagtagctgggattacagtcacctgccaccactcccagctaattttttata-gttttagtacagacggggtttcaccatgttggccaggctggtctcaaactcccgacctcaggtgatccatccacctcggcctcccaaagtcctgggattacagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615307 319 + 74645514 GTCTTACCTGGgtccctttttttgtgtgtgggtttttggtttgtttgttttttattgatatggagattcactcttgtcacctaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccaggttcaagtgattctcctgcctcagcctcttgagtatctgggattacagtcacctgccaccactcccagctaattttttata-gttttagtacagacggggtttcaccatgttggccaggctggtctcaaactcccgacctcaggcgatccatccacctcggcctcccaaagtgctgggattacagg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668430 319 - 75148670 GTCTTACCTGGGTCCCTGTTTTTGTGTGTGGGGtttttgtttgtttgttttttattgatacggagtttcattcttgtcacccaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccgggttcaagtgattctcctgcctcagcctcttgagaatctgggattacagtcacctgccaccactcccagctaattttttata-tttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcccgacctcaggcgatccatccaccttggcctcccaaagtgctgggattacaag i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126495029 291 + 159171411 GTGTTACCTGGGTCAtttttttt------------------------tttttttttgata---agtttcactcttgtcacc-aggctggaatgcaatggcacaatctcagctcactgcaatctctgcctcttgggctcaagtgattctcctgcctccgcctcctgagtagctgggattgcagtcacctgccacca-tcccagttaattttttgtattttttagtaaagacagggtttcactatgttagtcaggctggtctgaaactcctgacctcgggtgatccacctgcctcagcctccgaaagtgctgggattacagg i calJac3.chr5 C 0 M 3653 e canFam3.chr9 57394604 113 - 61074082 I a score=56124.000000 s hg38.chr17_GL383566v1_alt 1060 28 + 90219 cttgagccactgcgcccagccTTACCtg s panTro4.chr17 76211539 28 + 82630442 cttgagccactgcgcccagccTTACCtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309431 28 + 73212453 cttgagccactgcacccagccTTACCtg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74801827 28 + 80904711 cttgagccactgcgcccagccTTACCtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610607 28 + 80997621 cttgagccactgcgcccagccTTACCtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615626 28 + 74645514 cttgagccactgcgcccagccttaccTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668749 28 - 75148670 cttgagccactgcgcccagccTTACCtg i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57394604 113 - 61074082 I e calJac3.chr5 126495320 3653 + 159171411 M a score=2800.000000 s hg38.chr17_GL383566v1_alt 1088 1 + 90219 g s panTro4.chr17 76211567 1 + 82630442 g i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309459 1 + 73212453 g i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3633959 1 - 94967081 G i nomLeu3.chr14 N 0 C 0 s rheMac3.chr16 74801855 1 + 80904711 g i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610635 1 + 80997621 g i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615654 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668777 1 - 75148670 g i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57394604 113 - 61074082 I e calJac3.chr5 126495320 3653 + 159171411 M a score=1410771.000000 s hg38.chr17_GL383566v1_alt 1089 599 + 90219 gtacttttatgtgtcagcttgactgggccacg-gggttcccagatgtgtggtcagacattattctgggtgtctgtgggtgagtttaacatttaaatcagtggact----------------gagaggagtagactgtgctccctagtg-tgggggggcctcatccagtcagttgaaggcctgcatagaacaaaaagcctcaccctcccccgaggaagagaa---ttctccggactgcctgccttcagactggg-acactggctttttcctgccttggaacttgaatgctggctcttcttgggcctcaagcct--cagactggaaccctgtggtc-cgctctcctgggcct-ccagcttg-ccgactgcagcagatcttgggac---ttaacctctgcaatcacatgagccgaatccttgtcatc-------------------------------------------------------------tctgtgtgtgtgattctctg--tctctctacacaca-tgtacatacaccctgttgttctg-------tttctataggagaTGTGCTCCAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtatgtgtgtg--------------------------------------------tgtatgtgtgtgtttgGAGTTT-TTCTTCCCATCAATAGGCTTAT s panTro4.chr17 76211568 599 + 82630442 gtacttttatgtgtcagcttgactgggccacg-gggttcccagatgtgtggtcagacattattctgggtgtctgtgggtgagtttaacacttaaatcagtggact----------------gagaggagtagactgtgctccctagtg-tgggggggcctcatccagtcagttgaaggcctgcatggaacaaaaagcctccccctcccccgaggaagagaa---ttctccggactgcctgccttcagacaggg-acactggctttttcctgcctttgaacttgaatgctggctcttcttgggtctcaagcct--cagactggaaccctgtggtc-cgctctcctgggcct-ctagcttg-ccgactgtagcagatcttgggac---ttaacctctgcaatcacatgagccgaatccttatcatc-------------------------------------------------------------tctgtgtgtgtgattctctg--tctctctacacgta-tgtacatacatcctgttgttctg-------tttctATAGGAGGTGTGCTCCAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCGTATGTGTGTG--------------------------------------------TGTATGTGTGTGTTTGGGGTTT-TTCTTCCCATCAATAGGCTTAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309460 630 + 73212453 gtacttttatgtgtcagcttgactgggccacg-gggttcccagatgtgtggttagacattattctgggtgtttgtgggtgagtttaacatttaagtcagtggact----------------gagaggagtagac--tgctccctagtgttgagggggcctcatctagtcagttgaaggcctgcatagaacaaaaaggctcaccctcccctgaggaagagaa---ttctccggcctgcctgccttcacactggg-acattggctttttcctgcctttgaacttgaacgctggctcttcttgggtctcaggcct--cagactggaaccacgtggtc-cgctctcctgggcct-ccagcttg-tcgactgcagcagatcttgggac---ttaacctctgcaatcacatgagccgaatccttatcgtc-------------------------------------------------------------tgtgtgtgtgtgattctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctatagGAGGTGTGCTCCAAAATCCTGCAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtatgtgtgtgtgtgcgtgcctgt------gtgtgcgtgtgtgtgt--------ctgtgtgtgtgtgtTTGGGGTTT-TTCTCCCCATCAATAGGCTTAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3633960 689 - 94967081 Gtacttttatgtgtcagcctgactgggccatgtgggttcccagatgtgtggtcagacattattctgggtgtttgtgggtgagtttaacatttaaatcagtggact----------------gagaggagtagactgtgctccctcgtg-agggggggcctcatccagttagttgaaggcccgcatagaacaaaaaggctcaccctcccccggggaagagaa---ttctccggcctgcctgccttcagactgggcacattggctttttcctgcctttgaacttgaatgctggctcttcttgggtctcagacct--cagactggaaccacgtggtc-cgctctcctgggcct-ccagcttg-ccgactgcagcagatcttggcac---ttaacctctgcaatcacatgagccgaatccttatcatctgtgtgcgtagattctctgtctctctctacacatatgtacatacatcctgtttccttatcatctgtGTGTGTGATTCTCTGTCTCTCTCTACACATA-TGTACATACATCCTGTTGTTCTG-------TTTCTATAGGAGGTGTGCT-CAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtgtgtgtgtgtgtgcgtgcatgt------gtgtgcatgcgtg------------tgtgtgtgtgtgtgtgGGGATT-TTCTCCCCGTCAATAGGCTTAT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74801856 624 + 80904711 gtacttttatgtgtcaacttgactgggccacg-gggttcccagatgtgtgttcagacattattctgggtgtttgtgggcgagtttgacatttaaaccagtggagtagagtagagtaccagtgagaagagttgactgtgttccctagtg-tg----------------------------------agaacagaaaagctcaccctccccagaggaagagaa---ttctccggcctgcctatcttcaggctggg-acatgggctttttcctgcctttgaacttgaacgctggctcttcttgggtctcaagcct--cagac--gaaccatgtggtc-caccctcctgggcctcccagcttg-ctgactgcggcagatcttgggac---ttaacctctgaaatcacatgagccaaatccttatcatc-------------------------------------------------------------tgtgtgtatgtggttctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctatagGAAGTGTGCTCCAAAATCCTGGCACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtgtgtgtgcgtgtgtgtgtgtgc--atgtgtgtgtgtgtgcgtgtgtgcatgcgtgtgtgtgtgtgtatgGGGTTT-TTCTCCCCATCAATAGGCTTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610636 620 + 80997621 gtacttttatgtgtcaacttgactgggccacg-gggttcccagatgtgtgttcagacattattctgggtgtttgtgggcgagtttgacatttaaaccagtggagtagagtagagtaccagggagaagagttgactgtgttccctagtg-tg----------------------------------agaacagaaaggctcaccctccccagaggaagagaa---ttctccggcctgcctatcttcaggctggg-acatgggctttttcctgcctttgaacttgaacgctggctcttcttgggtctcaagcct--cagac--gaaccatgtggtc-caccctcctgggcctcccagcttg-ctgactgcggcagatcttgggac---ttaacctctgaaatcacatgagccaaatccttatcatc-------------------------------------------------------------tgtgtgtatgtggttctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctATAGGAAGTGTGCTCCAAAATCCTGGCACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTcgtgtgtgtgcgtgtgtgtgtgtgc------gtgtgtgtgtgcgtgtgtgcatgcgtgtgtgtgtgtgtATGGGGTTT-TTCTCCCCATCAATAGGCTTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615655 647 + 74645514 Gtacttttatgtgtcaacttgactgggccatg-gggttCCCAGATGTGTGGCCagacattattctgggtgtttgtGGGCGAGTTTAACATTTAAACCAGTGGAGTAGAGTTGAGTACCAGTGAGAAGAGTTGAGTGTGTTCCCTAGTG-TG----GGCCTCATCCAGTCAGTTGAAGGCCTGCATAGAACAGAAAGGCTCACCCTCCCCAGAGGAAGAGAA---TTCTCCGGCCTGCCTATCTTCAGACTGGG-ACATGGgctttttcctgcctttgaacTTGAACGCTGGCTCTTCTTGGGTCTCAAGC----TAGAC--GAACCATGTGgtc-caccctcctgggcct-ccagcttg-ctGACTGAGGCAGATCTTGGGAC---TTAACCTCTGCAATCACATGAGCCAAATCCTTATcatc-------------------------------------------------------------tgtgtgtatgtgattgtctgtctctctctacacata-tgtacatacatccTGTTGTTCTG-------TTTCTATAGGAAGTGTGCTCCAAAATCCTGGCACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTggttcatgtgtgtgcatgtgtgtgcatgt------gtgtgtgtgtgcgtgtgtgcatgcgtgtgtgtgtgtgtatggggttt-CTCTCCCCCTCAATAGGCTTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668778 655 - 75148670 gtacttttatgtgtcaacttgactgggccacg-gggctcccagatgtgtggtcagacattattctgggtgtctgtgggcgagttgaacatttaaagcagtggagtagagtagagtaccagtgagaagagttgactgtgttccctagtg-tg----ggcctcatccagtcagttgaaggcctgcacagaacagaaaggctcacccttccccgaggaagagaa---ttctccggcctgcctgtcttcagactggg-acatgggctttttcctgcctttgaac-tgaacgctgcctcttcttgggtctcaagcct--cagac--gaaccatgtggtc-caccctcctgggcct-ccagcttgcccgactgcggcagatcttgggac---ttaacctctgtaatcacataagccaaatccttatcatc-------------------------------------------------------------tgtgtgtatgtgattctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctatagGAAGTGTGCTCCAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTtgtgtgtgtgcgtgtgtgtgtgcgtgtgtgtgtgtgcgtgtgtgcatgtgtgtgtgtgtgtgtgtgtgtATGGGGTTT-TTCTCCCCATCAATAGGCTTAT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57394717 497 - 61074082 gcagttagatgggtagacttgagtgaagcaga-tcgctccctaat----------------------------------------------------------------------------gag-----------------------g-tg----ggccttatccaatcagttgaaggcctgaatggaacaaaagg--ctgccctccccaaaggaaaagaggattcctcctgcctgatagtcttcaaactggg-atatccactttctcttgccttcagactaaaaagt---ctcttcctgggtctcaaacctgctggactagaataataccatcaagccctccagagtct-ccagcttg-ctgact---gcagatcttgggatttgttagcctccataatcatgtgagcc-------tattgcc-----------------------------------------------------------------tatatcagatt-------tccttctatatatgctttctattgattccgactctctgggggatcctcataTGGGAAGTGTGCTCCCAAACCCTGGAATTGCAAAGCCTTTGACTTTTACAAAGAACCTGGTTAATCTGCAATCATCTTTCTCTGGTTTG------------------------------------------------------TGTAGGTGTGTGTTTTGGTTTCAGTTTTTCCATCAATAGGCTTAT i canFam3.chr9 I 113 I 2035 e calJac3.chr5 126495320 3653 + 159171411 M a score=1177028.000000 s hg38.chr17_GL383566v1_alt 1688 528 + 90219 CCCAAccggttgcagtggctcactcctgtaatcccagcactgtaggaggctgaggcaggcagatcgcttgagcccaggggttcgagaccagcctgactaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtggtgggcgccta-taataccagctacttgggaggctgaggcacaagaatcaattgaacctgggaggcagaggttgcagtgagccgagatcgtgccactgcacaccagcctgggtgacagagtgaggctctgtctccaaaaaaaaaaaa--aaaaaaaaaaag--------gaaaaTAaaattaaaacatttttgtggacacctaaaggatcatgggcccAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCCGAGCCCTGCCCTGTGGGGTGGGAAAGAAGGGGACCTGCCCAGTGTCACGGTCAGTGGCCAAGCTGGAC----GACAGGTAATCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGCTCTCCCAGAACCTAGAA s panTro4.chr17 76212167 510 + 82630442 CCCAAccggttgcagtggctcactcctgtaatcccagcactgtaggaggctgaggcaggcagattgcttgagcccaggggttcgagaccagcctggctaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtggtgggcgccta-taataccagctacttgggaggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagtgagccgagatcgtgccactgcacaccagcctgggtgacagagccaggctctttctc------------a--aaaaaaaaaaag--------------aaaattaaaaCATTTTTGTGGACACCTAAAGGATCATGGGCCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCCGAGCCCTGCCCTGCGGAGTGGGAGAGAAGGGGACCTGCCCAGTGTCACCGTCAGTGGCCAAGCTGGAC----GACAGGTAATCCCTGAGTCCTGCCCCAGCCAGACCTGCCCTCTGCTCTCCCAGAACCTAGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67310090 508 + 73212453 CCCAACCAGTTgcagtggctcactcctgtaatcccagcactgtgggaggctgaggcaggcagatcgcttgagcccaggggttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtgatgggcgccta-tcataccagctacttgggaggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagtgagccgagatagtgccactgcactccagcctgggcgacagagcgaggctctgtctc--------aaaaa--aaaaaaaaaaag--------gaaaagaaaattaaaacatttttgtggactcctaaaggatcattggcccAGTGGAGAAGGTGGCCTTCCTCCCTTCCTCAGAGCCCCCGAGCCCTGCCCTGTGGGGTGGGAGGGAAGGGGACCTG------------GTCAGTGGCCAAGCTGGAT----GACAGGTAATCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGCTCTCCCAGAACCTAGAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3634649 534 - 94967081 CCCAAccggttgcagtggctcactcctgtaatcccagcactgtaggaggctgaggcaggcagatcgcttgagcccaggggttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtggtgggcgcctattaataccagctacttgggaggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagtgggccgagatcgtgccactgcacaccagcctgggctacagagcaaggctctgtctc---caaaaaaaaa--aaaaaaaaaaaggaaGGGAGGAaaagaaaattaaaacattttcgtgaactcctaaaggatcatgggcccAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGGGCCCCCGAGCCCTGCCCTGTGGGGTgggagggaaggggacctgcccagtgtcacagtcggtggccaagctggac----gacaggtaatccatgagtcctgccccagccagctctgccctctgctctcccaGAACCTAGAA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74802480 522 + 80904711 CCCAACCAGTTgtggtggctcactcctgtaatcctagcactgtgggaggctgaggcaggcagatcgcttgagcccaggagtttgtgaccagcctggccaatatggtgagaccccatctctactaaaaacacgaaaattatctgggtgtgggaacgggtgcctg-taataccagctactcgggaggctgaggcacaagcatcacttgaatctgggaggcagaggttgtagtgagccgagatcacaccactgcacttcagcctgggggacagagcgaggctctgtctc----taaa-------aaaaagaaaaag--------aaaaagaaaaTTACAACATTTTTCTGGACCCCTAAAGGATCATGGGCCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCC-AGCCCTGCTCTGTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACGGTCAGTGGCCGAGCTGGACAACAGACAGGTAGTCCCTGAGTCCTGCGCCAGCCAGCCCTGCCCTCTGCGCTCCCAGAACCTAGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74611256 522 + 80997621 CCCAACCAGTTgtggtggctcactcctgtaatcctagcactgtgggaggctgaggcaggcagatcgcttgagcccaggagtttgtgaccagcctggccaatatggtgagaccccatctctactaaaaacacgaaaattatctgggtgtggtaacgggtgcctg-taataccagctactcgggaggctgaggcacaagaatcacttgaatctgggaggcagaggttgtagtgagccgagatcacaccactgcacttgagcctgggggacagagcgaggctctgtctc----aaaa-------aaaaagaaaaag--------aaaaagaaaaTTACAACATTTTTCTGGACCCCTAAAGGATCATGGGCCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCC-AGCCCTGCTCTGTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACGGTCAGTGGCCGAGCTGGACAACAGACAGGTAGTCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGCGCTCCCAGAACCTAGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68616302 529 + 74645514 CCCaaccagttgtggtggctcactcctgtaatcctagcacggtgggaggctgaggcaggcagatcgcttgagcccaggagtttgtgaccagcctggccaatatggtgagaccccatctctactaaaaacacgaaaattatctgggtgtggtaacgggtgcctg-taataccagctactcgggaggctgaggcacaagaatcacttgaatctgggaggcagaggttgtagtgagccgagatcacaccactgcacttgagcctgggggacagagcgaggctctgtctc----aaaaaaaaaagaaaaagaaaaag--------aaaaagaaaattacaacatTTTTCTGGACCCCTAAAGGATCATGGGCCCAGTGGAGAAGGTggccctcctcccttcctcagagccccc-agccctgctctgTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACAGTCAGTGGCCGAGCTGGACGACAGACAGGTAGTCCCTGAGACCTGCCCcagccagccctgccctctgcGCTCCCAGAACCTAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30669433 526 - 75148670 CTCAACCAGTTgtggtggctcactcctgtaatcctagcactgtgggaggctgaggcaggcagatcgcttgagcccgggagtttgcgaccagcctagccaacatggtgaaaccccatctctactaaaaacacaaaaattatccgggtgtggtagcgggtgcctg-taataccagctactcaggaggctgaggcacaagaatcacttgaatctgggaggcagaggttgcagtgagccgagatcacaccactgcacttgagcctggggtacagagcgagtctctgtctc----aaaaaaaaa--aaaaagaaaaag--------aaaaag-aaaTTACAACATTTTTCTGGACCCCTAAAGGATCATGGACCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGGCCCC-AGCCCTGCTCTGTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACGGTCAGTGGCCTAGCTGGACGACAGTCAGGTAGTCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGTGCTCCCAGAACCTAGAA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57395214 2035 - 61074082 I e calJac3.chr5 126495320 3653 + 159171411 M a score=1019954.000000 s hg38.chr17_GL383566v1_alt 2216 389 + 90219 TCTGGGGGAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCGCCGCCTCCTCTC-ACCCCCTGCCACGGGCATCGGTGTGAGGCTGTGCTGGGGGCTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGTGTCTGGTACCTGTGGAGTTCCTGGAAGAATCTGTGCCCTGATTGCCATTGTGAGCTGTGCCGGGGAGGCTCTGTAGGAGAGGAGGA-GCAGTTAGCCGACTATTGGGGCGTGGGACAGGCTGGTCACGGGGCTCCGCTTCCTGGAGGGCTGCTGCTTTCGTAGG-CCTGGCATCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTCCCTGCAGGAGGTGCCAGCCCCTAGCTCTGGCAGCATCAGAGGAGCACATGAACCGAA s panTro4.chr17 76212677 384 + 82630442 TCTGGGGGAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACCGCCTCTTCTC-ACCCC-TGCCACGGGCATCAGTGTGGGGCTGTGCTGGGG-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCGTCTGGTACCTGTGGAGTTCCTGGGAGAATCTGTGCCCTGATTGCCATTGTGAGCTGTGCCGGGGAGGCTCTGTAGGAGAGGAG----CGGTTAGCCGACTATTGGGGCGTGGGACGGGCTGGTCACGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCATCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTCCCTGCAGGAGGTGCCAGCCCCTAGCTCTGGTAGTGTTAGAGGAGCACATGAACCGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67310598 376 + 73212453 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCGCCGCCTCCTCTC-ACCCCCTGCCACGGGCATTGGTGTGGGG------------CTGTGCTCACCCTCTGTGTCCCCGATGGGGCAGCATCCGGTACCTGTGGAGTTCCTGGGAGAATC--TGCCCAGGTTGCCATTGTGAGCTGTGCCAGGGAGGCTCTGTAGGAGAGGAGGA-GCGGTTAGCCGACTGCTGGGGCATGGGACGGGCTGGTCACAGGGCTCAGCTTCCTGGAGGGCTGCCACTTTCTTAGGCCCTGGCACCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTCCCTGCGGGAGGTGCCAGCGCCTAGCTCTGGCAGCATCAGAGGAGCACATGAACCGAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3635183 376 - 94967081 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACCGCCTCCTTTCAACCCCCTGCCACGGGCTTCGGTGTGGGG------------CTGTGCTCACCTTCTGCGTCCCCAATGGGGCAGCATCTGGTACCCATGGAGTTGCCAGGAGAATC--TGCCCAGATTGCCACTGTGAGCTGTGCCGGGGAGGCTCTATAGGAGAGGAGGA-GCGGTTAGCCGACTGTTGGGGCATGGGACGGGCTGGTCACCGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTTCCTGCGGGAGGTGCCAGCCCCTAGCTCTGGCAGCATCAGAGGAGCACACAAACCGAA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74803002 381 + 80904711 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACTGCCTCCGCTC-ACCCCCTGCCGCAGGCGTCGGTGTGGGGCTGTGCTGGGT-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAGAGTC--TGCCCGGATTGCCACTGTGAGCTGTGCCAAGGAGGCTCTGGAGGAGAGGAGGA-GAGGTGAGCCGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCGGCCGCATGCTGTC----TGTTTCCCTGCGGGAGGTGCCAGC-GCTAGCTCTGGCGGCATCAGAGGAGCACATGGACCAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74611778 381 + 80997621 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACTGCCTCCGCTC-ACCCCCTGCCGCTGGCGTCGGTGTGGGGCTGTGCTGGGT-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAGAGTC--TGCCCGGATTGCCACTGTGAGCTGTGCCAGGGAGGCTCTGGAGGAGAGGAGGA-GAGGTGAGCCGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCGGCCGCATGCTGTC----TGTTTCCCTGCGGGAGGTGCCAGC-GCTAGCTCTGGCGGCATCAGAGGAGCACATAGACCAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68616831 381 + 74645514 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAAGGCACTGCCTCCGCTC-ACCTCCTGCCACGGGCGTCGGTGTGGGGCTGTGCTGGGT-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAAAGTC--TGCCCGGATTGCCACTGTGAGCTGTGCCGGGGAGGCtctggaggagaggagga-gaggtgaGCCGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCGGCCGCATGCTGTC----TGTTTCCCTGCGGGAGGTGCCAGC-CCTAGCTCTGGTGGCATCAGAGGAGCACATGGACCAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30669959 385 - 75148670 TCTGGGGAAAGACTGAACAAGCTCTTCCTTGAAGGGAGGACACTGCCTCCGCTC-ACCCCCTGCCACGGGCGTCGGTGTGGGACTGTGCTGGGT-CTGTGCGCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAGAGTC--TGCCCGGATTGCCACTGTGAGCTCTGCCAGGGAGGCTCTGGAGGAGAGGAGGA-GACGTGAGCTGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCACTTTCTTAGG-CCTGGCACCCGTCCCTCCGGCCGCATGCTGTCTGATTGTTTCCCTGCGGGAGGTGCCAGC-CCTAGCTCTGGCGGCATCAGAGGAGCACATGGACCCAA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126499086 382 + 159171411 tctgggtgAACAA-GAATAAGCTCTTCCTTAAAGGGAGGGTGCCACCTCCT-TG-AGCCCCTGCTATGGG-GTCGGTGTGGAGTGGTGCTTGGG-CTGTGCTCACCCTCTGCGTCCCTGATGGGGCAGAATCTGGCACCTGTGGAGTTCCCAGGAGGATCTGTGCCTGGA-TGCCATCGTGAGCTGTGCC-TGGAGGCTCTGTAGGAGAGGAGGAGGTGGTTTCCTGACTGTCGGAGTGTGGGACGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCTGCTTTCTTAGG-CCTGGCACCTGCCCCTCCAGACACAGGCTGTCTGATTG---CTCTGCAGGAGGTGCCAACCCCTAGTTCCGGCAGCATCAGAGGAGCACATGGACTGAA i calJac3.chr5 M 3653 C 0 e canFam3.chr9 57395214 2035 - 61074082 I a score=2635413.000000 s hg38.chr17_GL383566v1_alt 2605 886 + 90219 TGCTTCCAGAAGGCTCTGCGGCTG-GTGGGGAGAAGGCTCTGGAGACCTTCAGTGAGTTGTGGCCTGTTCCCCGCTTCTCTCCGCACCGTTGGATGAGCCTCCTGTGGCATGGCTGGAAGGGCTGGGCGCTGAGGGTGTAGGCATCAGGACAG-CTTTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGACAGGGGCAGCTGGCGAA---GCCCTCGTGTGGTGTCTCAGTGAAGTGCCCAGTGA-TGGGCTAGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCC--AGTTCTTCCCTCCCTCCCACCTGCTCC------TGTCTCCTTCGTTTTCTGTTTCTGTCTGGGTTG-ACTCATGACATACCTGAGAGCCTCCTGGCTTCA-GCCTCTCTGCCATCCCCAGAGCAAGGAGGGCTCGGGGGGCACACAGTGTGGGAAGAGGCTGGAC--GGGAAGGCCAGAGGGTCACAATGGGTGGCGGGCGCCCTCCCTGCTGCCCCGTCTCGCCCGGCTCCCAGAGTCACTCATTCGGGCTCACTCTGGGCCCTCAGCTGCTCCCTCTGATCCCAGCCTCAAAGGTGCAGCT-GGTCTGGTTAGACACGTGTTCTCAGAAGGAGCAGAGAGTGATGCATTAATTTATCCTTTGTTGACTCTGA---AAGTCAAAAGCTCCC--GGGGAATCTGGACTAATCTC-TCTCCTAGAAGTGGCTGATTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACATGGCAGTGGGACCTCCATGCAGGTCCCTGAGTGGCCATGCCGCTCTCCT-----CCCCTTCCCGCCCAGGCCAGGCCTCCAGTGCTGTGCTTCCGCTGTTTCGTCTGCCTGGGACGCT---CCCGCCCCTGGAGAAGGAGAACTCAGGAAGCTCTT s panTro4.chr17 76213061 886 + 82630442 TGCTTCCAGAAGGCTCCGCGGCTG-GTGGGGAGAAGGCTCTGGAGACCTTCAGTGGGTTGTGGCCTGTTCCCCGCTTCTCTCCGCACCGTTGGATGAGCCTCCTGTGGCACAGCTGGAAGGGCTGGGCGCTGAGGGTGTAGGCGTCAGGACAG-CTTTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGACAGGGGCAGCTGGCGAA---GCCCTCGTGTGTTGTCTCAGTGAGGTGCCCAGTGA-TGGGCTAGGGCCACCCCTGTCCTGAGCCTCCCCGTGGCCCTCC--AGTTCTTCCCTCCCTCCCACCTGCTCC------TGTCTCCTTCGTTTTCCGTTTCTGTCTGGGTTG-ACTCATGACATACCTGAGAGCCTCCTGGCTTCA-GCCTCTCTGCCGTCCCCAGAGCAAGGAGGGCTCGGGGGGCACACAGTGTGGGAAGAGGCTGGAC--GGGAAGGCCAGAGGGTCACGATGGGTGGCGGGCGCCCTCCCTGCTGCCCCATCTCGCCCGGCTCCCAGAGTCACTCATTCAGGCTCACTCTGGGTCCTCAGCTGCTCCCTCTGATCCCAGCCTCAAAGGTGCAGCT-GGTCCGGTTAGACACGTGTTCTCAGAAGGAGCAGAGAGTGATGCATTAATTTATCCTTTGTTGACTCTGA---AAGTCAAAAGCTCCC--GGGGAATCTGGACTAATCTC-TCTCCTAGAAGCGGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCAGTGGGACCTCCATGCAGGTCCCCGAGTGGCCATGCCGCTCTCCT-----CCCCTTCCCGCCCAGGCCAGGCCTCCAGTGCTGTGCTCCTGCTGTTTCGTCTGCCTGGGACGCT---CCCGCCCCTGGAGAAGGACAACTCAGGAAGCTCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67310974 886 + 73212453 TGCTTACAGAAGGCTCCGCGGCTG-GTGGGGAGAAGGCTCTGGAGACCTTCAGTGAGTTGTGGCCTGTTCCCCGCTTCTCTCTGCACCATTCGATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAG-CTTTGCCTAGGCTGCCCACATTCTCTGCCCTGGGGGGACAGGGGCAGCTGGCGAA---GCCCTCGTGTGGTGTCTCAGTGAGGTGCCCAGTGA-TGGGCTAGGGCCACCCCTGTCCTGAGCCTCCCCATCGCCCTCC--AGTTCTTCCCTCCCTCCCACCTGCTCC------TGTCTCCTTCATTTTCCGTTTCTGTCTGGGTTG-ACTCATGACATACCTGAGAGCCTCCTGGCTTCA-GCCTCCCTGCCGTCCCCAGAGCAAGGAGGGCTCGGGGGGCACACAGTGTGGGAAGAGCCTGGAC--GGGAAGGCCAGAGGGTCTTTATGGGTGGCAGGCGCCCTCCCTGCTGCCCCGTCTTGCCCGGCTCCCAGAGTCACTCATTCGGGCTCACTCTGGGTCCTCAGCTGCTCCCTCTGATCCCAGCCTCAAATGTGCAGCC-GGTCCGGTTAGACACGTGTTCTCCGAAGGAGCAGAGAGTGGTGCATTAATTTATCCTTTGTTGACTCTCA---AAGTCTAAAGCTCCC--AGGGAATCTGGACTAATCTC-TCTCCTAGAAGCAGCTGGATATTTGTAAAAGGATCTGAGCTTGCTGCGTA-------------TCGCCTGGCAGTGGGAGCTCCATGCAGGTCCCTGGGTGGCCATGCCGCTCTCCT-----CCCCTCCCCGCCCAGGCCAGGCCTCCAGCGCTGTGCTCCTGCCATTTCCTCTGCCTGGGACACT---CCCGCCCCTCAAGAAGGAGAACTCAGGAAGCTCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3635559 882 - 94967081 TGCTTCCAGAAGGCTCCACGGCTG-GTGGGGAGAAGGCTCTGGAGACTTTCAGTGAATTGTGGCCTGTTCCCCGCTTCTCTCCGCACCGTTCAATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGCGCTGAGGGTGTAGGCATCAGGACAG-CTTTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGCCAGGGGCAGCTGGTGAA---GCCCTCATGTGGTGTCTCAGTGAGGTGCCCACTGA-TGGGCTAGGGCCACCCCAGTCCTGAGCCTCCCCACGGCCCTCC--AGTTCTTCCCTCCCTCCCACCTGCTCC------TGTCTCCTTCGTTTCCCGTTTCTGTCTGGGTTG-ACTCATGACATACCTGAGAGCCTCCTGGCTTCA-GCCTCCCTGCCGTCCCCAGAGCAAGGAGGGCTCGGGGGGCATAGAGTGTGGGAAGGGGCTGGAC--GGGAAGGCCAGAGGGTCATGACGGGTGGCGGGTGCCCTCCTTGCTGCCCCGTCTCGCCCGGCTCCCAGAGTCGCTCATTTAGGCTCTCTCTGGGTCCTCAGCTGCTCCCTGTGATCCCAGCCTCAAAGGTGCAGCT-GGTCCGGTTAGACATGCGTTCTCCGAAGGAGCAGAGAGTGATGCATTAATTTATCCTTTGTTGACTCTGA---AAGTCTAAAGCTCCC--AGGGAAGCTGGACTAATCTC-TCTCCTAGAAGTGGCTGGATATTTGTAAAACGATCTGAGCTTGCTGAGTG-------------TCACCTAGCAGTGGGAGCTCCATGCAGGTCCCTGGGTGGCCGTGCCGCTCTCCT-----CCCCTTCCCGCCCAGGCCA-GCCTCCAGTGCTGTGCTCCTGCTGTTTCCTTTGCCTGGGACGCT---CCCGCCCCTCTAGAAG---AACTCAGGAAGCTCTT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74803383 889 + 80904711 TGCTTCCAGAAGGCTCCGCGGCTG-GTCGGGAGACGCCTCTGGAGATCTTCAGTGAGTCGTGGCCTGTTCCTCGCTTCTCTCCGCACCGTTCGAAGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAG-CTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGAGACAGGGGCGGCTAGCGAA---GCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGA-TGGGCTGGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCC--AGGTCTTCCCTCCTTCCCACCTGCTCC------TTTCTCCTTCGTTTTCCGTTTCTGCCCAGGTTG-ACTCATGACATACCTGAGAGCCTCCTGGCTTCA-GCCTTCCTGCCGTCCCCAGAGTAAGGAGAGCTT-AGGGGCACACAGTGCTGGAAGAGGCTGGAC--GGGAAGGCCAGA-GGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCCGGAGTCGCTCATTCGGGATCACTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGCCTCAAAGGTGCGGCC-GGTGCGGTTAGACATGTGTTCTCCGAAAGAGTAGGGAGTGATGCATTCATTTATCCTTTGTTGACTCTGA---AAGTCTAAAGCTCCC--AGGGAATCTGGACTAATCTC-TCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCCGTGGGAGCTCCATGCAGGTCCCTGGCTGACCATGCCGctctcctccccacccctcccctccccacccAGGCCGCCAGCGCTGTGCTCCTGCTGTTTCCTCTGCCTGGGACGCT---CCCGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74612159 889 + 80997621 TGCTTCCAGAAGGCTCCGCGGCTG-GTCGGGAGACGCCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTCCTCGCTTCTCTCCGCACCGTTCGAAGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAG-CTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGAGAGACAGGGGCGGCTAGCGAA---GCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGA-TGGGCTGGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCC--AGGTCTTCCCTCCTTCCCACCTGCTCC------TTTCTCCTTCGTTTTCCGTTTCTGCCCAGGTTG-ACTCATGACATACCTGAGAGCCTCCTGGCTTCA-GCCTTCCTGCCGTCCCCAGAGTAAGGAGAGCTC-AGGGGCACACAGTGCTGGAAGAGGCTGGAC--GGGAAGGCCAGA-GGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCCGGAGTCGCTCATTCGGGATCACTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGCCTCAAAGGTGCGGCC-GGTGCGGTTAGACATGTGTTCTCCGAAAGAGTAGGGAGTGATGCATTCATTTATCCTTTGTTGACTCTGA---AAGTCTAAAGCTCCC--AGGGAATCTGGACTAATCTC-TCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCCGTGGGAGCTCCATGCAGGTCCCTGGCTGACCATGccgctctcctccccacccctcccctccccacccAGGCCGCCAGCGCTGTGCTCCTGCTGTTTCCTCTGCCTGGGACGCT---CCCGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68617212 890 + 74645514 TGCTTCCAGAAGGCTCCGCGGCTG-GTCGGGAGACACCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTCCTCGCTTCTCTCCGCACCGTTCAATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAG-CTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGAGACCGGGGCGGCTAGCAAA---GCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGA-TGGGCTGGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCC--AggtcttccctccctcccacctgctCC------CTTCTCCTTCGTTTTCCGTTTCTGCCCGGGTTG-ACTCATGACATACCTGAGAGCCTCCTGGCTTCA-GCCTTCCTGCCGTCCCCAGAGTAAGGAGGGCGT-GGGGGCACACAGTGCTGGAAGAGGCTGGAC--GGGAAGGCCAGAGGGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCTGGAGTCGTTCATTCAGGATCACTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGCCTCAAAGGTGCGGCC-GGTGCGGTTAGACATGTGTTCTCCGAAAGAGTAGAGAGTGATGCATTCATTTATCCTTTGTTGACTCTGA---TAGTCTAAAGCTCCC--AGGGAATCTGGGCTAATCTC-TCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCCGTGGGAGCTCCATGCAGGTCCCTGGCTGACCATGCcgctctcctcccctcccctcccctccctaccCAGGCCGCCAGCGCTGTGCtcctgctgtttcctctgcctgggacGCT---CCTGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30670344 883 - 75148670 TGCTTCCAGAAGGCTCTGCGGCTG-GTCGGGAGACGCCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTCCCCGCTTCTCTCCACACCGTTGGATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGGCGGTGTAGGCGTCAGGACAG-CTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGACA-GGGCGGCTAGCGAA---GCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGA-TGGGCTGGGACCACCCCTGTCCTGAGCCTCCCCATGGCCCTCC--AGGTCTTCCCTCCCTCCCACCTGCTCC------TTTCTCCTTCATTTTCCGTTTCTGCCCGGGTTG-ACTCATGACATACCTGAGAGTCTCCTGGCTTCA-GCCTTCTGGCCGTCCCCAGAGTAAGGAGGGCTC-GGGGGCACACAGTGCGGGAAGAGGCTGGAC--GGGAAGGCCAGAGGGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCTGGAGTCGCTCATTCGGGATCGTTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGTCTCAAAGGTGCGGCC-GGTGCAGTTAGACATGTGTTCTCCGAAAGAGTAGAGAGTGATGCATTCATTTATCCTTTGTTGACTCTGA---AAGTCTAAAGCTCCC--AGGGAATCTGGGCTAATCTC-TCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCTGTGGGAGCTCCATGCAGGTCCCTGGC-GACCACGCCGCTGTCCT-----CCCCTCCCATCCCCACCCAGGCCGCCAGCGCTATGCTCCTGCTGTTTCCTCTGCCTGGGATGCT---CCCGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126499468 856 + 159171411 TGCTTCCAGAAGGCTCCACCGCTG-GTGGGGAGAAGCCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTTCCCGCTTCTCTCCCCACCGCTTGATGAGCCTCCCGTGGCATAGCTGGAAGGATTGGGCGCTGAGGGTGTCAGCGTCAGGTCAG-CCCTGCCTGGGCTGCTCACATTCTCTGCCCTGGGGGGG-ACGGGCGCCTGACAAA---GCCCTTGTGTA--GTCTCAGTGAGGTGCCCGGTGA-TGGGCTCAGGCCAGTCCTGT-CTGAGCTGCCCCATGGCCATCC--AGGTCTTCCCTC--TGCCCGCTGCTC---------------TTGTTTTACGTTTCTGCCCAGGTTG-ACTC-TGGCATACCTGACAACCTCCTGGCTTTA-GCCTCCCTGCCGCTCCCAGAGAAAGGAGGGCTCAGGGGGCCCACAGTGTAGGAAGTGGCTGGAT--GGGAAGGCCAGAGGGTCATGATGGGTGGTGGGCACCCTCCCTGCTGCCCAGTCTCACTTGGCCCCTGGAGTCACTCATTCGGGCTCACTCTGTGTCCTCAGCGGCTCCCTCTCATCCCAGCCTCAGAGGTGCAGCT-GGTCCGGGCAGGCACGTGTTCTCTGAAGGAGCA--GAGTGATGCATTCATTTATTCTTTGTTGATTCTGA---AAGTCTAAAGCTCCC--AGGGAATCTGGACTAATCTC-TTTCCTAGAAGTGCCTGGTTATTTGCAAAAGGATCTGAGCTTGCTGAGTGGGAGCTCCACACCTCACCTC-CAGTGGGAGCTCCACACCTCACCTCCAGTGG-------GAGCTCCA-----CACCTC--------------ACCTCCAGCGCTCTGCTTCTGCTGTTTCCTCTGCCTGGGATGCT---CCAGCCCCTCGAGGAG---AACTCGGGAAGCTTGA i calJac3.chr5 C 0 C 0 s canFam3.chr9 57397249 770 - 61074082 TGCTTCTAGAATGTTCCATGGCTACGTGGCAAGAGGCCCCTGGAGGTCTTCAGGGAGTCAGAGTCTGTTCCC------------AACCCTTGAACATGCTGGCT-TGGCTTAGCTTGCAG--TTGGGCACTG---------------TGACAGCCCCTGCTTGGATAGCCCACACCCTCTGCCCTGG------AGAAGCATCTGGCAAAGGGGTCCCTGTGCTG-GTGCTAGGGAGGTGCCCAGTGATTGTGCTCAGGCCACATTGTTTCTGAGCTGCCCCATTGCCCTCTGGGGGTCCTCCTCCCTACCCACTACCTCCAGTGCATCTCCCCTTATCTTTCCTTTTCAGCCTCAGTAACACTCAGCATATGCCACAGAGTCT-CTGGCTTCACCCCTCCCCATGGACCCCAGCCTGAGGAGGGCTCAGAGGG-----AGTGCCT--AGGGACTGGCCCAGGGAGAGC---AGGCTCCTGA-GGGTGGCAGGTGCCTC-------------TCCCAGCCTGGTGCTGAGGGCAGACCTACGGG------CCAGACCCCCACTTGCTCCCTTTACTCACGGCCTC-------CGACTGGGCCCGGGTGTCTGAGTATTCTCCAAAGGAGCAGGTGG-------ATAAATTATTCTTTGTTGACTCAGAGTCATGTCTAAAGCTCCCTAGTGGAATCTGTGCGAATCCCTTTTCCTAGAAGCT--------CTCATGA--------------GTTGAGCC-------------TAGGCTGGCAGTAGAA-------------------TTGGC-------------------CCCATACCTGCCC------GGCCTCCAGGCCCTTGCCTCTGTTG-CTCCTGCACCTGGAACCCTGACCCCATGCCCCGGGAAGGAGACCCCACAAAGCCCTT i canFam3.chr9 I 2035 I 594 a score=1413587.000000 s hg38.chr17_GL383566v1_alt 3491 491 + 90219 CCCTGAAGACATTTGTGGGGGCTTGGCcagcctcccttcctgtcccccttgtcccctgcacagacttttgtgcaacgctgcgatgatt------tattttattttttatctcttgtagtgatggggtctaaccatgttgcccaggctggtctcaaattcctaggctcaagcgatcctcccgcttcggcctcccaaaaggcacagacacaagccaccgtgcccggccCTGTGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACCGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAAGGTGGAGGTCAGAAGGGCCTCCCTTCCCCCGCGAGAAGGGCAGGTCCTACCACAGCATGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGGCTGCATTCACAGGCCAGAGC------------tttttttttttttttttttttt s panTro4.chr17 76213947 490 + 82630442 CCCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTCCTGACCCCCTTGTCCCCTGCATAGACTTTTGTGCAACGCTGCAATGATT------TATTTTattttttatcttttgtagtgatagggtctcaccatgttgccgaggctggtctcaaattcctaggctcaagcgatcctcctgcctcggcctcccaaaaggcacagacacaagccaccgtgcccggccCTGTGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACCGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCCGCGAGAAGGGCAGGTCCTACCACAGCATGGGTGGGCGCCGGGGATGTGGAAGGAAGCTGAACTGCCTCTAGTCCAGGCTTCTCAGGCTGCATTCACAGGCCAGAGC-------------ttttttttttttttttttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67311860 501 + 73212453 CCCTGAAGACATTTGTAGGGGCTTGGCCAGCCTCCCTTCGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACACTGTGATGAtt------tattttattttttatcttttgtagtgatagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagcaatcctcacgcctcggcctcccaaaaggcacaggcacaagccaccgcgcccggcCCCGTGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACCGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCACCAGCGAGAAGGGCAGGTCCTGCTACAGCATGGGTGGGTGCCTGGGATGCGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGGCTGCATTCACAGGCCAGAGCGtttc--tttttttttcttttttttttttttttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3636441 503 - 94967081 CCCTGAAGACGTTTGCAGGGACTTGGCCAGCCTCCCTTCGTGTCCCCCTTGTTCCCTGCACAGACTTTTGTGCAACGCTGTGATGAtt------tattttattttttatctttcgtagtgatagggtctcaccatgttgcccaggctggtctcaaactcctaggctcaagcgatcctcccgcctcggcctcccaaaaggcacaggcacaaggcaccgtgcccggccCCATGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAGGGTGGAGATCAGAAGGGCCTCCCTTCACCAGTGAGAAGGGCAGGTCCTGCTACAGTGTGGGTGGGTGCCTGGGACGCAGAAGGAAGCTGAACTGCTTCTAGTCCTGGCTTCTCAGGCTGCATTCACAGGCCAGAGCGTTTCtttttttctttctttttttttttttttgt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74804272 479 + 80904711 CTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACGCTGTGATGATT------TGTTTTattttttatcttttgtagtgaaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagtgatcctcccgcctcggcctcccaaaAGG-------------CACAGTGCCCGGTCCTGTGATGTTCACGGAACTGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGACACAGAGCAGGTGCTGGTGCATTGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCATGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGTCTGCATTCACAGGCCAGAGT------------Atttcttttcttttcttttttt i rheMac3.chr16 C 0 I 240 s macFas5.chr16 74613048 479 + 80997621 CTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACGCTGTGATGATT------TGTTTTattttttatcttttgtagtgaaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagtgatcctcccgcctcggcctcccaaaAGG-------------CACAGTGCCCGGTCCTGTGATGTTCACGGAACTGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGACACAGAGCAGGTGCTGGTGCATTGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCAGGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGTCTGCATTCACAGGCCAGAGT------------ATTTCttttcttttcttttctt i macFas5.chr16 C 0 I 12 s papAnu2.chr16 68618102 488 + 74645514 CTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACGCcg---tgatt------tgttttattttttatcttttgtagtgaaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagcgatcctcccgcctcggcctaccaaaaggcacaggcacaagccacagtGCCCGGTCCTGTGATGTTCACGGAACTGACTTGTCCCAGGTctgtctccttctccttcctaccTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGacacagagcaggtgctggtgcA-TGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCATGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTTCAGGCTTCTCAGTCTGCATTCACAGGCCagagc------------atttcttttcttttcttttttt i papAnu2.chr16 C 0 I 12 s chlSab2.chr16 30671227 491 - 75148670 CTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACACCGTGATGATT------TGTTTTattttttatcttttgtagtgcaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcgagcgatcctcccgcctcggcctcccaaaaggcacaggcacaagccacagtgcccggtcCTGTGACGTTCACAGAACTGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGACACAGAGAAGGTGCTGGTGCG-TGGAGTGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCATGGCTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGTCTGCATTCACAGGCCAGAGC------------Atttcttttctttctttctttc i chlSab2.chr16 C 0 I 9 s calJac3.chr5 126500324 494 + 159171411 CTGTGAAGACATTTGTCAGGGCTTGGCCAGCATCCATTCGTGTCCCACTTGT-CCCTGCACAGACTTTTGTGCAATGCTATGAGATTTATtttatattttattttttatcttttatagtaatggggtctcaccatgttgaccaggctggtctcaaattcctgggctcaagcgatcctcttgcctcagcctaccaaaaggcacaggcacaaggcaccttgcctggccCCGTGATGTTCATGGAACCGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTGTGACTGACTGAGCCCTTGAGCTGCGCTGGACACTCAGAAGGTGCTGGTGTG-TGGAGGGTGG---TCAGAAGGGCCTCCCTCCTCCAGGGAGAAGG-CAGGGCCTGCCACGGCATGGGTGGGCGCCTGGGACGTGGAAGCAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGGCTGCATTCACGGGCCAGAGC------------Atttcttttctttttttttc-- i calJac3.chr5 C 0 C 0 e canFam3.chr9 57398019 594 - 61074082 I a score=535675.000000 s hg38.chr17_GL383566v1_alt 3982 242 + 90219 gagacagagtctctacctgtctcgcccaggctggagtgcaatggcgcagtcttggctcactgcagcctccgcttcctgggttcaagcgattctcctatctcagcttcccgagtagctgagactgcaggcatgtgccaccacgctcggctaattttgtatttttag-tagagacgggg-tttcaccatgttggccaggctggtctctaactccggacctcaggtgatccactggccttggcct-ct- s panTro4.chr17 76214437 242 + 82630442 gagacagagtctctacctgtctcgcccaggctggagtgcaatggcgcagtcttggctcactgcagcctccgcttcctgggttcaagcgattctcctatctcagcttcccgagtagctgagactgcaggcatgtgccaccacgctcggctaattttgtatttttag-tagagacgggg-tttcaccatgttggccaggctggtctcgaactccggacctcaggtgatcccctggccttggcct-ct- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312361 243 + 73212453 gagacagagtctctacctgtctcgcccaggctggagtgcaatggcgcagtcttggctcactgcagcctctgcctcctgggttcaagcgattctcctatctcagcttcccaagtagctgggactgcaggcatgcgccaccacgcccggctaattttgtatttttag-tagagacaggg-tttcaccatgttggccaggctggtctcaaacccctgacctcaggtgatccactcgccttggcctccc- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3636944 242 - 94967081 gagacagagtctctaccggtctcgcccaggctggagtgcaatggcgtgatcttggctcactgcagcctccacctcctgggttcaagcgattctcctatctcagcttcctgagtagctgggactgcaggcatgtgccaccacgcctggctgattttgtatttttag-taaagacaggg-tttcaccatgttggccaggctggtctcaaactcctgacctca-gtgatccactcaccttagcctccc- i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74613539 240 + 80997621 tggacagcgtctctacctgtctcgcccaggctggagtgcaatggtgcgatcttggctcactgcagcctctgcctcctgggttcaagcaattctcctatctc--cttcctgagtacctgggactgcaggcgtgtgccaccacgcctggctaattttgtatttttag-tagagacgggg-tttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgccttggcct-cc- i macFas5.chr16 I 12 I 1 s papAnu2.chr16 68618602 240 + 74645514 tagacagagtctctacctgtctcgcccaggctggagtgcaatggtgcgatcttggctcactgcagcctccgcctcctgggttcaagcaattctcctatctc--cttcctgagtacctgggactgcaggcatgtgccaccacgcctggctaattttgtatttttag-tcgagacgggg-tttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgccttggcct-cc- i papAnu2.chr16 I 12 I 1 s chlSab2.chr16 30671727 240 - 75148670 aagacagagtctctacctgtctagcccaggctggagtgcaatggtacgatcttggctcactgcagcctccgcctcctgggttcaagcaattctcctatctc--cttcctgagtacctgggactgcaggcatgtgccaccacgcctggctaattttgtatttttag-tagagacgggg-tttcaccatattggccaggctggtctcgaactcctgacctcaggtgatccactcgccttggcct-cc- i chlSab2.chr16 I 9 I 1 s calJac3.chr5 126500818 243 + 159171411 -agatggagtctcaatctgtctctcccaggatggagtgcagtggcacaatcttggctcactgcagcctcctcctcctgggttcaagcgattctcctgtcttagcttcctgagtagctgggattacaggcatgcaccaccgtgtccggctaattttgtatttttaattagagttggggagttcaccatgttagccagga-ggtcttgaactcctgacctcaggtgatccactcacctgggtct-ccc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57398019 594 - 61074082 I e rheMac3.chr16 74804751 240 + 80904711 I a score=195621.000000 s hg38.chr17_GL383566v1_alt 4224 67 + 90219 aaagtgccgagattacaggtgtgaggcaccgcacccagccCTCCCGCAGTTCTGATTGGATAACCCA s panTro4.chr17 76214679 67 + 82630442 aaagtgctgagattacaggtgtgaggcaccgcgcccggccCTCCCGCAGTTCTGATTGGATAACCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312604 67 + 73212453 aaagtgctgagattacagatgtgagccaccgcgcccggccCTCCTGCAGTTCTGATTGGATAACCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3637186 67 - 94967081 aaagtgctgggattacagacgtgagccaccgtgcccggccCTCCCGCGGTTCTGATTGGATAACCCA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74804991 67 + 80904711 aaagtgctgggattacaggtgtgaaccaccgcgcccggccCTCCCGCAGTTCTGATTGAACAACCCA i rheMac3.chr16 I 240 C 0 s macFas5.chr16 74613780 67 + 80997621 aaagtgctgggattacaggcgtgaaccaccgcgcccggccCTCCCGCAGTTCTGATTGAACAACCCA i macFas5.chr16 I 1 C 0 s papAnu2.chr16 68618843 67 + 74645514 aaagtgctgggattacaggcgtgagccaccgcgcccggccctcccgCAGTTCTGATTGAACAAACCA i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 30671968 67 - 75148670 aaagtgctgggattacaggcgtgagccaccgcgcccggccCTCCCGCAGTTCTGATTGAACAACCCA i chlSab2.chr16 I 1 C 0 s calJac3.chr5 126501061 66 + 159171411 aaagtgctgggattacaggtgtgagccactggg-cAAGCCCTCCTACAGTTCTGATTAGACAACCCA i calJac3.chr5 C 0 C 0 e canFam3.chr9 57398019 594 - 61074082 I a score=493924.000000 s hg38.chr17_GL383566v1_alt 4291 205 + 90219 GCCCAGGAGTGCCCCGgagccctccctctggccgtatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagggtcagtcctactgtccccactgcacagatggggaaactgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtccggccccag s panTro4.chr17 76214746 205 + 82630442 GCCCAGGAGTGCCCCGgagccctccctctggccgtatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagggtcagtcctactgtccccactgcacagatggagaaactgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtccggccccag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312671 190 + 73212453 GCCCAGGAGAGCCCTGGAGCCCTCCTTCTGGCCatatgctgagctcagtgcctca---------------tccccacccatccctgcagggtcagtcttactgtccccactgcacagatggggaaaccgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtccggacccaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3637253 205 - 94967081 GCCCAGGAGTGCCCCGgagccctccttctggccatgtgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagggtcagtcctactgtccccactgcacagatggggaaactgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtctggccccaa i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74805058 204 + 80904711 ACCCAGGAGTG-CCCGgagccctccccctggccatatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagagtcagtcctactgttcccactgcacagatgggaaaactgaggcttggaggggttggggaaatttacccacagtttcagccaacaaaatggagaacaggatccagtctggccccac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74613847 204 + 80997621 ACCCAGGAGTG-CCCGgagccctccctctggccatatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagagtcagtcctactgttcccactgcacagatgggaaaactgaggcttggaggggttggggaaatttacccacagtttcagccaacaaaatggagaacaggatccagtctggccccac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68618910 205 + 74645514 GTCCAGGAGTGCCCCGGAGCCCTCCCTCTGGCCATATGCTGAGCTCAGTGCCTCACCCCCACCATTTTAGTCCCCACCCATCCCTGCAGAGTCAGTCCTACTGTCCCCACtgcacagatgggaaaactgaggctcagaggggttggGGAAATTTACCCACAGTTTCAGCCAACAAAATGGAGAACAGGATCCAGTCTGGCCCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30672035 205 - 75148670 GTGCAGGAGTGCCCCGgagccctccctctggccatatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagagtcagtcctaccgtccccactgcacagatgggaaaactgagcctcggaggggttggggaaatttacccacagtttcagtcaacaaaatggagaacaggatccagtctggccccac i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57398019 594 - 61074082 I e calJac3.chr5 126501127 0 + 159171411 C a score=1665125.000000 s hg38.chr17_GL383566v1_alt 4496 602 + 90219 gccctgctctgctgacctctgttttatCTTCCCACCCGGGACCCAGAGGATGGGGTGCTCCTCAGGACCCGCCACAGAGCCCGACCGGAGGACTGGGAATGTGCCCACAGCTGGGACAAGGAACCAGCCAGCAGCATTCCTGGCAGGC----CCATCCCAGCCAGGTGAGGCCCCAGCTCCTCTTGGCTTCTCCCACTGTGGGTACGGGGACGTGACAGCAAATAGACTG-TCCAATTTCCCTGCCCTCGCGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGATGGCTGCTTCTGGGAGACACAGCAGGGAAGCGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCGTCGGCCTCTCCCCTACATGCTCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAGTGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATTCTTTTGCCTGCTGGCCACAGCGGGAAGCAGCAGATGCTGCCCGGGCCGGCCTGTGGGGACGGCACCCTGCCTCTGGAAGGCTCGGTGATGCTGCGGCCAGCCGGTGTCCACCAGGCCTGTGCCAGGTGAGATGGGCCTTCACGGTGGCCTGGCTCC s panTro4.chr17 76214951 602 + 82630442 gccctgctctgctgacctctgttttatCTTCCCACCCAGGACCCAGAGGATGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCAACCGGAGGACTGGGAATGTGCCCACAGCTGGGACAAGGAACCAGCTGGCAGCATTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCAGCTCCTCTCGGCTTCTCCCACTGTGGGTACGGGGACATGACAGCAAATAGACCG-TCCAATTTCCCTGCCTTCGTGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGATGGCTGCTTCTGGGAGACACAGCAGGGAAGCGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCTTCGGCCTCTCCCCTACATGCTCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAGTGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATTCTTTTGCCTGCTGGCCACAGCGGGAAGCAGCAGATGCTGCCCGGGCCGGCCTGTGGGGACGGCACCCTGCCTCTGGAAGGCTCGGTGGTGCTGCGGCCAGCTGGTGTCCACCAGGCCTGTGCCAGGTGAGATGGGCCTTCACGGTGGCCTGGCTCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312861 606 + 73212453 gccctgctctgctgacctctgttttatCTTCCCCTCCAGGACCCAGAGGATGGGGCGCTCCTCAGGGCCCGCCACAGAGCCCGACCAGAGGACTGGAAATGTGCCCACAGCTGGGACAAGGAACCAGCCGGCAGCCTTCCTGGCAGGCCCATCCATCCCAGACAGGCCAGGCCCCAGCTCCTCTCGGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACTGTTCCAATTTCCCTGCCCTCGTGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGATGGCTGCTCCTGGGAGACACAGCAGGGAAGCGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCATCGGCCTCTCCCCTACATGCCTGTGCCTGCCCCAAAGCCCTCAGTGTCTCAGTGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATT-GTTTGCCTGCTGGCCACAGCGGGAAGCAGCAGATGCTGCCCGGGCCGGCCTGTGGGGATGGCACCCTGCCTCTGGAAGGCTCCGTGGTGCTGCGGCCAGCCGGTGTCCACCAGGCCTGTGCTGGGTGAGATGGGCCTTCACGGTGGCCTGGCTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3637458 575 - 94967081 gccctgctctGCTGACCTCTGTTTTATCTTCCCACCTG--------------------------GGGCCCGCCACAGAGCCCGACCGGAGGACGGGGAATATGCCCACAGCTGGGACAAGGAACCAGCCGGCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCAGCTCTTCTCGGCTTCTCCCACTGCGGGTATGGGGACATGACAGCAAATAGACCA-TCCAATTTCCCTGCCCTCGTGCAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGACGGCTGCTCCTGGGAGACACAGCAAGGAAGAGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCGTCGGCCTCTCCCCTGCATGCCCCTGCCTGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGAACTTTCTCTCCCTTCCTGGGACTCAGGGAGGGATT-CTTTGCCTGCTGGCCAGAGGAGGAAACAGCAGATGCTGCCCGGGCCGGCCTGTGGGGACGGCACCCTGCCTCTGGAAGGCTCAGTGGTGCTGTGGCCAGCCGGTGTCCACCAGGCCTGTGCCAGGTGAGATAGGCCTTCACGGTGGCCTGGCCCC i nomLeu3.chr14 C 0 I 7 s rheMac3.chr16 74805262 599 + 80904711 gccctgctctgctgacctctattttatCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCGACCGGAGGACGGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCA-GCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACCG-TCCAATTTCCCTGCCCTCATGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGATAGTGACAGTTGCTCCTGGGAGACACAGTAGGGAAGCGCTGAGACGTGCAGGGGAGTCGGGGAATTGGCGTCAGCCTCTCCCCTGCATGCCCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATT-CTTT-CATGCTGGCCAGAGC-GGAAACAGCAGATGCTGCCTGGGCCGGCCTATGGAGACGGCACCCCGCCTCTGGAAGGCTCGGTGGTGCTGTGGCCAGCCGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTTC i rheMac3.chr16 C 0 I 25 s macFas5.chr16 74614051 599 + 80997621 gccctgctctgctgacctctattttatCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCGACCGGAGGACGGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCA-GCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACCG-TCCAATTTCCCTGCCCTCATGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGATAGTGACAGCTGCTCCTGGGAGACACAGTAGGGAAGCGCTGAGACGTGCAGGGGAGTCGGGGAATTGGCGTCAGCCACTCCCCTGCATGCCCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATT-CTTT-CATGCTGGCCAGAGC-GGAAACAGCAGATGCTGCCCGTGCCGGCCTATGGAGACGGCACCCCGCCTCTGGAAGGCTCGGTGGTGCTGTGGCCAGCCGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTCC i macFas5.chr16 C 0 I 7 s papAnu2.chr16 68619115 599 + 74645514 GCCCTGCTCTGCTGACCTCTATTTTATCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCTGCCACAGAGCCCGACCGAAGGACTGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCT-GCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACTG-TCCAATTTCCCTGCCCTTATGGAGTAAGATGGAGAGGAACGTTCCGGAGCAGACAGTGACGGCTGCTCCTGGGAGACACAGTAGGGAAGCGGTGAGCCGTGCAGGGGAGTCGGGGAATTGGCGTCGGCCTCTCCCCTGCATGCCCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGgactttccctcccttcctgggACTCAGGGAGGGATG-CTTT-CGTGCTGGCCAGAGC-GGAAACAGCACATGCTGCCCGGGCCGGCCTATGGGGACGGCACCTCGCCTCTGGAAGGCTCGGGGGTGCTGTGGCCAGCCGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTCC i papAnu2.chr16 C 0 I 7 s chlSab2.chr16 30672240 598 - 75148670 gccctgctctgctgacctctattttatCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCGACCGGAGGATGGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCC-ACAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACCA-TCCAATTTCCCTGCCCTCATGGAGT-AGATGGAGAGGAACGTTCTGGAGCAGACAGTGACGGCTGCTCCTGGGAGACACAGTAGGGAAGCGGTGAGACGTGCAGGGGGGTCGGGGAATTGGTGTTGGCCTCTCCCCTGCATGCCCCTGCCTGCCCCAAAGCCCTCAGAGTCTCAATGCTAGTCTGGACTTTCCTTCCCTTCCTGGGACTCAGGGAGGGATT-CTTT-CGTGGTGGCCAGAGC-GGAAACAGCAGATGCTGCCCGGGCCGGCCTATGGGGACGGCACCCCGCCTCTGGAAGGCTCGGTGGTGCTGTGGCCAGCTGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTCC i chlSab2.chr16 C 0 I 25 s calJac3.chr5 126501127 552 + 159171411 GCCCTGCTTGGCTGACC------TTATCTTCCCACCTGGGGCCCAGAGGATGGGGTGCTCT-----------------GCTGGACCGCAGGACTGGGGATGTGCCCACAGCTGGGACAAGGAACCAGCCAGCAGCCTCCCTGGCAGGC----CCATCCCAGCCAGCAGAGACCACAGCTCCTCTCAGCTGTTCCCACGGTGGGCATGGGGATATGACAGCGAATCAA----TCCAGTTTCCCTGCCCTTGTGGAGCAAGATGGAG-GGAACAACCTGCTGCAGTCGCT----CCTGCTCCTGGGAGACACAGCAGGGAAGCAGTAAGCCATGTAGGAGAGTTGGGG-ATTGACGTCTGCTTCTCCCCTGTGTGC-CCTCCCTGCCCC-AAGCTGTCAGTGTCTCAGTGCTAGTCCGGACCTTCCCTCCCTTCCTGGGGCTCAGGGAGGGAGT-CTTTGCCTGCTGGCCAGAGTGGGAAACAGCAGATGCTGCCCGGGCTGGCCTGTGGAGA---------------GGAAGGCTCAGTGGGGCCATGGACAGATGGTGTCCGCCAGGCCTGTGCAAGGTGAGATGGGCCTTCATGGTGGTCTGGCCT- i calJac3.chr5 C 0 C 0 e canFam3.chr9 57398019 594 - 61074082 I a score=13609.000000 s hg38.chr17_GL383566v1_alt 5098 16 + 90219 --------GTGGGCCAGGCCCCC--G s panTro4.chr17 76215553 16 + 82630442 --------GTGGGCCAGGCCCCC--G i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67313467 16 + 73212453 --------GTGGGCCAGGCCCAC--A i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3638040 18 - 94967081 --------ACAGGTGGGGCTCCTGGG i nomLeu3.chr14 I 7 C 0 s macFas5.chr16 74614657 16 + 80997621 --------ACAGGTGGGGCCCCT--G i macFas5.chr16 I 7 I 2 s papAnu2.chr16 68619721 16 + 74645514 --------ACAGGTGGGGCCCCT--G i papAnu2.chr16 I 7 I 2 s calJac3.chr5 126501679 24 + 159171411 GGCCAGGTACAGGTGGGGCTCCT--G i calJac3.chr5 C 0 C 0 e canFam3.chr9 57398019 594 - 61074082 I e rheMac3.chr16 74805861 25 + 80904711 I e chlSab2.chr16 30672838 25 - 75148670 I a score=2542814.000000 s hg38.chr17_GL383566v1_alt 5114 863 + 90219 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCACGAGGGACCCCAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATACTTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTTCGAGGCTCATGGCCAGAAGGCT------GGGAGCTCCCTGAAGGC--AAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGGCCATGGATGGGGGCCTTGGGGCCAACCACCCGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATGGAGGAGTAGCCTGACACTGAGAAGTGAGGGGGCATCCACGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacatgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgggttctcacgaggtctgatggttttataaggggctcttctcccttcctattccttctctttctctcctgctgccttgcgaagaaggcgtctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccatgtggaactgtgagtcaattaaacctccctggctgataaattacctagtctcgggtagtatctttatggcagtgtggaaatggactaatacaGCAGGTGATCTGGGAATGGAGGGGAAATACTTCTGGGAATGTCACTGATCTAAAACCTGTCTGTAGTGGGGTTGGATGACGAGCCACGCTGGTGAACCGATTTCCTGATCCTC s panTro4.chr17 76215569 863 + 82630442 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCATGAGGGACCCTAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATACTTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTTCGAGGCGCATGGCCAGAAGGCT------GGGAGCTCCCTGAAGGC--AAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGGCCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATGGAGGAGTAGCCTGACACTGAGAAGTGAGGGGGCATCTAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgggtgggttctcacgaggtctgatggttttataaggggctcttctcccttcctattccttctctcgctctcctgctgccttgtgaagaaggcgtctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccgtgtggaactgtgagtcaattaaacctccctggctgataaattacctagtctcgggtagtatctttatggcagtgtggaaatggactaatacaGCAGGTGATCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTGATCTAAAACCTGCCTGTAGTAGGGGTGGATGACGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67313483 862 + 73212453 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCACGAGGGACCCCAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATACTTCCAGGATCCCGA-GGGAGGAGACAGCCCCGGACTTCGAGGCACATGGCCAGAAGGCT------GGGAGCTCCGTGAAGGCAAAAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGACCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATGGAGGAGTAGCCTGACACTGAGAACTCAGGGAGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggaaggaggtgattggatcatggaggcagcttctccagtgctgttctcgtgatagtgagtgggttctcacgaggtctgatggttttataaggggctcttctcccttccttttccttctctt--tctcctgctgccttgcgaagaaggcgtctgcttctccttctgccgtaagtgtaagtttcctgaggtgtccccagctatgtagaactgtgagtcaattaaacctcccttgctgatacattacctagtctcaggtagaatctttatagcagtgtggaaatggactaatacaGCAGGTGATCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTGATCTGAAACCCGCCTGTAGTGGGG-TGGATGGCAAGCCATGCTGGTGAACCGATTTCCTGATCCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3638058 820 - 94967081 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCACGAGGGACCCCAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATCTTTCCAGGACTCTGA-GGGAGGAGACAGCCCCGGACTTCGAGGCACATGGCCAGAAGACTGGGAGCGGGAGCTGCGTGAAGGT--GAGCACAGGGCACCCAGAAGACAGCAGCAGGCAGGGGCTATGCATGGGGACCTTGGGGCCAACCCCCAGGTGGAGGCTTGATGGAAGGAGGAAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATAGAGGAGTAGCCTGACACTGAGAAGTCAGGGAGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccagctctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagcgagtgggttctcacgaggtctgatggttttataaggggctcttctcccttcgttttccttctctc-------------------------tcgcctgcttccccttctgctgtgagtgtaagtttcctgaggtctccccagccatgtagaactgtgagtcaattaaacctcccttgttgatacattacctagtctcgggtagtatcttgatagcagtgtggaaatggactaatacaGTAGGTGA-----------------------TCTGGGAATGTCACTGATCTGAAACCCGCCTATA-CGGGGATGGATGACGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74805886 860 + 80904711 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGACCACAAGGGACCCCAACTCGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTAATTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTCTGAGGCACATAGCCAGAGGGCT------GGGAGCTCTGTGAAGGC--GAGCACAGGGAACCCAGAAGAGAGCGGCAGGCAGGGGCCATGCGTGGGGGTCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgagttctcacaatgtctgatggttttataaggggctcttctcccttccttttccttctctc--tctcctgctgccttgcgaagaaggtgcctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccacatagaaccgtgagtcagttaaacctcccttgttgataaattacctagtctcgggtagtatctttatagcagtgtggaaatgggctaatacaGCCAGTGACCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGGGGG-TGGATGATGAGCCACTCTGGTGAACCGATTTCCTGATCCTC i rheMac3.chr16 I 25 C 0 s macFas5.chr16 74614675 860 + 80997621 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGACCACAAGGGACCCCAACTCGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTAATTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTCTGAGGCACATAGCCAGAAGGCT------GGGAGCTCTGTGAAGGC--GAGCACAGGGAACCCAGAAGAGAGCGGCAGGCAGGGGCCATGCGTGGGGGTCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgagttctcacaaggtctgatggttttataaggggctcttctcccttccttttccttctctc--tctcctgctgccttccgaagaaggtgcctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccacatagaaccgtgagtcagttaaacctcccttgttgataaattacctagtctcgggtagtatctttatagcagtgtggaaatgggctaatacaGCCAGTGACCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGGGGG-TGGATGATGAGCCACTCTGGTGAACCGATTTCCTGATCCTC i macFas5.chr16 I 2 C 0 s papAnu2.chr16 68619739 850 + 74645514 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGAGCACAAGGGACCCCAGCTCGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTACTTCCAGGATCCCGA-GGGAGGAGACAGCCCTGGACTCTGAGGCACATAGCCAGAAGGCT------GAGAGCTCTGTGAAGGC--GAGCACAGGGAGCCCAGAAGAGAGCGGCAGGCAGGGGCCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCttgatggaaggagggagggagccacCGAC----------GGTCCTTGGATGTCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGTGat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagctTCCCcagtgctgttctcgtgatagtgagtgagttctcacaaggtctgatggttttataaggggctcttctcctttccttttccttctctc--tctcctgctgccttgcgaagaaggtgcctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccacatagaaccgtgagtcagttaaacctcccTTGTtgataaattacctagtctcgggtggtatctttatagcagtgtggaaaTGGGCTAATACAGCCGGTGACCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGAGGG-CGGATGATGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i papAnu2.chr16 I 2 C 0 s chlSab2.chr16 30672863 850 - 75148670 --GATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGAGCACAAGGGACCCCAACTTGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTACTTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTCTGAGGCACATAGCCAGAAGGCT------GGGAGCTCTGTGAAGGC--GAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGGCCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGAC----------GGTCCTTGGATGTCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGATCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgagttctcacaaggtctgatggttttataaggggctcttctcccttccttttccttctctc--tctcctgctgccttgcgaagaaggtgcctgcttccccttctgccgtgagtgtaagttccctgaggtctccccagccacgtagaaccgtgagtcagttaaacctcccttgttgataaattacctagtctcgggtagtatctttctagcagtggggaaatgggctaatacaGCCGGTGACCTGGGAATGGAGAGAAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGGGGG-TGGATGATGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i chlSab2.chr16 I 25 C 0 s calJac3.chr5 126501703 849 + 159171411 GTGATGCGTCCCTCCCCTGGCAGGCAGTAGATTGGAGAGGAGCCCTAGGAGCATGAGAGACCCCAACTCGGGGGACTTCAGAGCTGCCTGCCTGGGTGGGGACAGGTGCAAGGATGAGACTTCCAGGACCCCGAGGGGAGGAAACAGCCACAGACTTTGAGGCGCATGGCAAGAAGGCT------GGGAGCTCCGAGAAGGC--GAGCACAGGG-ACCCAGAAGACAGCAGCAGGCAGGAGCCCTGCGTGGG--CCTGGGGGCCAACCACCAGGTGAAAGCTTGGTGGAAGGAGGGAGGGAGCCACCAACAGTCCTTGAGGGTCCTTGGATGCCTGTTTATGGAGGAGTAG-CTGACACTGAGAAGTCAGGGACTATCCAGGTCCCA-GCCTGGGTGAGCCAGGTGATCTGGCtggtttggctctgtg------------tctcatcttgaactgtaatccctacttttggagggagggaggtgattggatcatggagctagtttgcccagtgctgttctcgtgatagtgagtgagttctcacgaggtctgatggttttataagggtctcttttcccttccttttccttctttc--tctcctgctgcgttgcgaggaaggtgcctgcttccccttccgccctgagtgtaagtttcctgaggcctccccagccgtgcaaaactgtgagtcaattaaacctcccttgtttatagattacctagtctagggcagtatctttacagccgcttggaaatggactaatacaGTGGGTGATCTGGAAATGGAGAGGAAATACCTCTGGGAATGTCACTGA--TGAAACCTGCCTGTAGTAGGAGTGGGTGACAAGCCACACTGCTGAACCGATTTCCTGATCCTC i calJac3.chr5 C 0 C 0 e canFam3.chr9 57398019 594 - 61074082 I a score=1537796.000000 s hg38.chr17_GL383566v1_alt 5977 510 + 90219 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GATGTATGGGCCCGCTTGTCTGGTT------------CCAGCCTTTGGGGC-CTGCTGAGATTTGCTGGGGCCGCAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGAACTTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTGCTGTGCTCCTAGTTTATGAACTACTGATCTTTGCTGACTCTATGGAGAGAGCAATGGATGGAAGGGATGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTATTGTAATTCTGTGCACGGCCCCCTCTTGACAT--TCTCCACTCCTGTGGAATTTGGTTTTACGACCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGTGTTTCCCTGTGCTCAGAT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGATCCAGAGTCAATGAAGAC s panTro4.chr17 76216432 540 + 82630442 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GATGTATGGGCCCGCTTGTCTGGTT------------CCAGCCTTTGGGGC-CTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGACCTTTTCCAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTGCTGTGCTCCTAGTTTATGAACTACTGATCTTCGCTGACTCTATGGAGAGAGCAATGGATGGAAGGAATGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTGTTGTAATTCTGTGCACGGCCACCTCTTGACAT--TCTCCACTCCTGTGGAATTTGGTTTTACGACCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGCGTTTCCCTGTGCTCAgatggtgacggtgacggtgatggtgacggtgacggtgacggtgTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAATGAAGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67314345 511 + 73212453 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GATGTATGGACCCGCTTGTCTGGTT------------CCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGACCTTTTCAAGAACATTTTCAGGGTGTAGGTGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAACTACTGATCTTCGCTGACTCTATGGAGAGACCAATGGATGGAAGGGATCGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAATATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTATTGTAATTCTGTGCACAGCCACCTCTTGATAT--TCTCCACTCCTGTGGAATTTGGTTTTACAACCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGCGTTTCCCTGTGCTCAGAT------------------------------GGTGATGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAATGAAGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3638878 511 - 94967081 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCTGGCTCTCAGACATGGG----------GGTGCATGGACCCACTTGTCTGGTT------------CCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGCCCTTTTCGAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTCTAGGAACTGCTGATCTTCACTGACTCTATGGAGAGATCAATGGATGGAAGGGATGGAAGGCCCTTTGCTTTTTAAAGCAAAATAGAGAGCATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTATTGTGATTCTGTGC-CGGCCACCTCTTGATAT--TCTCCACTCCTGTGGAATTTGGTTTTACGACCACAGGACTAAGCTAGTTAGGA--------------CGTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGCGTTTCCCTGTGCTCAGGT------------------------------GGTGATGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAATGAAGAC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74806746 520 + 80904711 AGAGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCGCTTGTCTGGTTCCAAAGCTGGTTCCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCTGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAATTACTGATCTTTGCTGACTC--TGGAGAGTTCAGTGGATGGAAGGGGTGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCACGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTACCACAGAACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGCTCAGTT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i rheMac3.chr16 C 0 I 10 s macFas5.chr16 74615535 520 + 80997621 AGGGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCGCTTGTCTGGTTCCAAAGCTGGTTCCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCTGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAATTACTGATCTTTGCTGACTC--TGGAGAGTTCAGTGGATGGAAGGGGTGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCACGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTACCACAGAACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGCTCAGTT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68620589 522 + 74645514 AGGGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCACTTGTCTGGTTCCAAAGCTGGTTCCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCCGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAACTACTGATCTTTGCTGACTCTATGGAGAGTTCAATGGATGGAAGGGGTGGAAGGCCCTTTGCTTTCGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCATGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTGCCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGCTCAGAT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 30673713 503 - 75148670 AGGGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCGCTTG-------------------CCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCCGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACGTGCTACTGTGCTCCTGGTTTAGGAACTACTGATCTTTGCTGACTCTATGGAGAGTTCAATGGATGGAAGGGATGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCACGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTACCACAAGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGTTCAGAT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i chlSab2.chr16 C 0 I 1 s calJac3.chr5 126502552 608 + 159171411 AGGGATTCCTGCAGGGGTGGCCCGGGTTCCT-GCTCTAGGATATGGA----------GAAGCATGGACCCGCTTGTCTGGTT------------CCAGCCTTTGGGGTGCTGCTGAGACTTGCTGGGACCACAGGAAGGGGAGCAGTTGGCTTCTTGTTTGATACCTTTTCAAGAA-GTTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTGCTGTGCTCCCGGTTTAGGAACTACTGTTCTTTGCTGACTCAGTGGAGAGATCAATAGATGGAATGGATGAAAG--CCTTTGCTTTTGAAAGCAGAATAGAGAACATCTGAGCTATGCAAGAAGAGCATGGACAGGGACCTATTATAATTCTGTGAACGGCCGCCTCTTGATAA--TCTCCACTGCTGTGAAATTTGGTCTTTCGACCACAGGAAGAAGCTAATTAGGA--------------GTCAGCTGAGGAGTTGGGCCACTTGCTGAGGAGATGGGCTGCGTGCTGAGGAGTTGGGCCGCGTGCTGAGGAGTTGGGCCGCGTGCTGAGGAGTTGGGCCGCCTGCTGAGGAG---TTGGGCCGTGTTTCCATGCGCTCAGTT------------------------------GGTAACAATGTCGTGCAGCTTCTCTTGCCA-CAAGACCCAGAGTCAATTAAAAC i calJac3.chr5 C 0 C 0 s canFam3.chr9 57398613 503 - 61074082 AGGGGCTGCCGTTGGTGTGTCCCTGTGTCCA-GTGCTGGCCCCTGGGCTCCCACAGTGGGGAGGGAGCCCCCTGCCCCCGCT------------CCA-CCCCTGGGGC-CGGCTGTGACACGCTCAGGCCTCAGGCAGGGAAGTGGGGGACTTCCTGCTTGGGACATTTCCAAGACAGTCTCGGGCGTGTGGG-GAG--------------------ATGCACCTGCTTTCAGAACCACTGCTCTCTGCCGATCC-----------CCACAGACAGACAAGTGGGAAA--CACTCGTGTTTGGAAGCCAGAGAGAGCAGGTCTGGGTTGTGCATGGGAACCTGAGCCAGGAGTCTGTTGTCATTCTGTGG-CAGGTGCCCCTTGATCCTTTCTCCCTTCCTGTGTGAGCTGATC-TGTGACCGAAGGAATGAGCTAGAGAGGGATGGGGCCCCACCCCTCG----------------------------------------------------------------------------------------------------GCCGATGAGCTTACGGGTGGCCGGTGGATGTGCCCAAGC------------------------------GGCAGTGCCATTGAGTGGCTTCTCCTGCCACCAAGGCCTAGACGCAAATTAAAC i canFam3.chr9 I 594 C 0 a score=8307.000000 s hg38.chr17_GL383566v1_alt 6487 3 + 90219 AGG s panTro4.chr17 76216972 3 + 82630442 AGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67314856 3 + 73212453 AGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639389 3 - 94967081 AGG i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616055 3 + 80997621 GGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68621112 3 + 74645514 GGG i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 30674217 3 - 75148670 GGG i chlSab2.chr16 I 1 C 0 s calJac3.chr5 126503160 3 + 159171411 AGG i calJac3.chr5 C 0 I 1 s canFam3.chr9 57399116 3 - 61074082 AGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74807266 10 + 80904711 I a score=284868.000000 s hg38.chr17_GL383566v1_alt 6490 187 + 90219 ACTCCAGAGTGTTTGCACAGAAGCCGGGTCTTCCAGCCAAAGTGGATTCTGTGTGATTACAA--------------GTTTGCTAGCAATGCCACCCTGGtttatttattttaa-----tttattttattttttt-AAACAGCAAAACCAAAATGAAGCAATTGAATTGGGTTTCACAATAATGAAGGAAAAGCCTTGTGTCTAtttt s panTro4.chr17 76216975 191 + 82630442 ACTCCAGAGTGTTTGCACAGAAGCCAGGTCTTCCAGCCAAAGTGGATTCTGGGTGATTACAA--------------GTTTGCTAGTAATGCCACCCTGGTTTAtttattttaatttattttattttattttTTT-AAACAGCAAAGCCAAAATGAAGCAATTGAATC-AGTTTCACAATAATGAAGGAAAAGCCTTGTGTCTAtttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67314859 172 + 73212453 ACTCCAGAGTCTTTTCACAGAAGCCAGGTCTTCCAGCCAAAGTGGATTCTGTGTGATTACAA--------------GTTTGCTAGTAATGCCACCCCGGTTTATT-------A-------------ATTTTTTT-AAACAGCAAAGTCAAAATGAAGCAGTTGAATCGGGTTTCAAAATAATGAAGGAAAAGCCTTGTGTGTAtttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639392 177 - 94967081 ACTCCAGAGTCTTTGCACAGAAGCCAGGTCTTCCAGCCAAAGTGGATTCTGTGTGATTACAA--------------GTTTGCTGATAATGCCACCCTGGTTTATT---------------TATTTTATTTTTTT-AAACAGCAAAACCAAAATGAATAAATTGAATCTGGTTTGACAATAATGAAGGAAAAGCCTTGTGTCTAtttt i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68621115 181 + 74645514 ACTCCAGAGTCTTTGCACAGAAGCCAGGTCTTCCAGCCAAAGTAGATTCTGTGTGATTACAA--------------GTTTGCTAATAATGCCaccctgtt------------ttaaattttattttatttttttaaaacagcaaaaacaaaatgaagcaattGAATCGAGTTTCGCAATAATGAAGGAAAAgctttgtgtctatttt i papAnu2.chr16 C 0 I 1447 s chlSab2.chr16 30674220 191 - 75148670 ACTCCAGAGTCTTTGCACAGAAGCCAGGTCTTCCAGCCAAAATAGATTCTGTGTGATTACAA--------------GTTTGCTAATAATGTGACCCTGTTt--tttattttattttattttattttattttTTTAAAACAGCAAAAACAAAATGAAGCAATTGAATTGGGTTCCACAATGGTGAAGAAAAAGCTTTGTGTCTAtttt i chlSab2.chr16 C 0 I 1476 s calJac3.chr5 126503164 171 + 159171411 ACTCCAGCATCTTTGCACAGAAGCCAGATCGTCCAGCCGAAGTGGATTCAGTGTGATTACAA--------------GTTTGCTACTAATGTTGCCCTGGTAGATT--------------------TATTATTTT-AAACAGCAAAACCAAAATGAGGCAATTGAATCAGGCTTCATGGTGATGGAGAAAAAGCC-TGTATCTATTTT i calJac3.chr5 I 1 I 3786 s canFam3.chr9 57399119 177 - 61074082 GTCTCAGG---TCTGCACAGAAGCCAGCTTTTCCACTCAACATGGATTCTTTAAGAGGGCAATTATTATTATTATTTTTTGCTAATAATGTTAC------------------------TTTTTCTTTTTTTTTT-TAATTGCAAATCC-ATATGAACCTTTTGAATTAGGTTTCACGGTAAAGCAGGAGAAGCC-TGTGTCTGTGTT i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74807266 10 + 80904711 I e macFas5.chr16 74616058 0 + 80997621 C a score=1422.000000 s hg38.chr17_GL383566v1_alt 6677 3 + 90219 gtt s panTro4.chr17 76217166 3 + 82630442 ttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315031 3 + 73212453 ttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639569 3 - 94967081 ttc i nomLeu3.chr14 C 0 C 0 s canFam3.chr9 57399296 3 - 61074082 TTT i canFam3.chr9 C 0 I 2550 e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30674411 1476 - 75148670 I e papAnu2.chr16 68621296 1447 + 74645514 I e macFas5.chr16 74616058 0 + 80997621 C a score=241523.000000 s hg38.chr17_GL383566v1_alt 6680 493 + 90219 tgtttgtttgtttgagacggagtttcgctcttgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacctccgcctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggattacaggcactggccacaatgcccggctaatttttttggtatttttaatagagatgggttttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccCTTGTGTCTGttttttaattaaaattttgatggagataattgtagatccacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccgccaatggcaacatcttgcaaaattataattcactaccacaaccaggctatcaatgttgggacaatcCACCAGtcttattattta s panTro4.chr17 76217169 449 + 82630442 tgtttgtttgtttgagacggagtttcgctcttgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacctccgcctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggattacaggcaccagccacaacgcccggctaatttttttggtatttttaatagagatgggttttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccagccCTTGTGTCTGttttttaattaaaattttgagggagataattgtagatccacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccgccaatggcaacatcttg--------------------------------------------caaTCCACCAGTCttattattta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315034 482 + 73212453 t-----tttttttgagacagagttttgctcttgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacctccccctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggattacaggcacccgccacaatgcccggctaatttttttggtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggcttacaggtgtgagccactgcgcccagccCTTGTGTCTGttttttaattaaaattttgatggagataattgtagatccacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccaccaatggcaacatcttgcaaaattataat------ccataaccaggctatcaatgttgggacaatccaccAGtcttattattta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639572 488 - 94967081 t-----tttttttgagacggagtttcactctcgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggactacaggtacgtgccacaacgcccggctaatccttttggtatttttagtagagatggggtttcaccatgttggccaggccggtctcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagtcactgcgcccggccCTTGTGTCCGttttttaattaaaattttgatggagataatcgtagattcacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccaccaatggcaacatcttgaaaaattataatccacaaccacaaccaggctatcaatgttgggacaatccaccagtcttattATtta i nomLeu3.chr14 C 0 C 0 e canFam3.chr9 57399299 2550 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30674411 1476 - 75148670 I e papAnu2.chr16 68621296 1447 + 74645514 I e macFas5.chr16 74616058 0 + 80997621 C a score=8130.000000 s hg38.chr17_GL383566v1_alt 7173 24 + 90219 tttatttat----------------------------tgagacagagtatca---- s panTro4.chr17 76217618 24 + 82630442 tttatttat----------------------------tgagacagagtatca---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315516 24 + 73212453 tttatttat----------------------------tgagacggagtcttg---- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3640060 52 - 94967081 tttatttatttacttacttacttacttacttccttcctgagacggagtctca---- i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68622743 30 + 74645514 TTTATTTTT--------------------------CGTGTAACGGAGTCTccctcg i papAnu2.chr16 I 1447 C 0 e canFam3.chr9 57399299 2550 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30674411 1476 - 75148670 I e macFas5.chr16 74616058 0 + 80997621 C a score=150955.000000 s hg38.chr17_GL383566v1_alt 7197 120 + 90219 ctctgttgcccaggctggagtgcagtgacgtgatctcagctcactgcaacctccgctttccaggttcaagtgattctcctgcttcagccacccgagtagctgggattacaagtgtgcagc s panTro4.chr17 76217642 120 + 82630442 ctctgtcgcccaggctggagtgcagtgacgtgatctcagctcactgcaacctctgctttccaggttcaagtgattctcctgcttcagccacctgagtagctgggattacaagtgtgcagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315540 120 + 73212453 ctctgtcgcccaggctgtagtgcagtgacgtgatctcagctcactgcaacctctgctttccaggttcaagtgattctcctgcttcagccacctgagtagctgggattacaggtgtgcagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3640112 120 - 94967081 ctctgtcgcccaggctggagtgcagtgacgtgatctcagttcactgcaacctctgctttccaggttcaagtgattctcctgcttcagccacctgagtagctggaattacaggtgtgcAGC i nomLeu3.chr14 C 0 I 456 s papAnu2.chr16 68622773 120 + 74645514 ctctgccgcccaggctggagtgcagtggcatgatctcagctcactgcaatctccacctcccagattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgtgcacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30675887 120 - 75148670 ctctgccgcccaggctggagtgcaatagcacaatctcagctcactgcaatctccacctcccagattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgtgcacc i chlSab2.chr16 I 1476 C 0 e canFam3.chr9 57399299 2550 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=53410.000000 s hg38.chr17_GL383566v1_alt 7317 66 + 90219 accacgcccagccaatttttgtatttttagtagagaccggggtttcgccatgttggcca----ggtctcg s panTro4.chr17 76217762 70 + 82630442 accacgcccggccaatttttctatttttagtagagaccggggtttcaccatgttggccaggctggtctcg i panTro4.chr17 C 0 I 424 s ponAbe2.chr17 67315660 70 + 73212453 accacacccggccaatttttgtatttttagtagagaccggggtttcaccatgttggccaggctggtctca i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 68622893 69 + 74645514 accacgcccggccaatttttgtatttttagtagagact-gggtttcaccaaggtggccaggctggcctca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30676007 69 - 75148670 accacgcccggccaatttttgtatttttagtagagacc-aggtttcaccatgttggccaggctggcctca i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3640232 456 - 94967081 I e canFam3.chr9 57399299 2550 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=163340.000000 s hg38.chr17_GL383566v1_alt 7383 208 + 90219 aactcctgacctcaagtgatccacctgccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagtcCCAATTTTTTTTT--GATGCCTGCTCCTTCT---GAGGCAGgtgtactgatttttatgtggacgtaaactttcgtttttccaggcagtacaatagccgccgtgtcatgtggtagttagttgcgtgttttgtttg s panTro4.chr17 76218256 213 + 82630442 aactcctgacctcaagtgatccacctgccttggcctcccaaagtgctgggattacaggcatgagccactgcgcccagtcCCAATTTTTTTTTTTGATGCCTGCTCCTTCTTCTGAGGCAGgtgtactgatttttatgtgaacgtaaactttcgtttctccaggcagtgcgatagctgccgtgtcatgtggtagttagttgcatgttttgtttg i panTro4.chr17 I 424 C 0 s ponAbe2.chr17 67315730 211 + 73212453 aactcctgacatcaagtgatccacctgccttggcctcccaaagtgctgggattacaggcatgagccactgcgcccagtcCCAATTTTTTTTT--AACGCCTGCTCCTTCTTCTGAGGCAGgtgtactgatttttatgtgaacgtaaactttcgtttctccaggcagtgcaacagccgccgtgtcatgtggtagttagttgcatgtttcgtttg i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 68622962 197 + 74645514 aa--------------taatccacccgcctcggcctcccaaagtgctgggattacaggcgtgaaccactgcactcagtcccaattttttttt--aatgcctactCCTCCTTCTGAGGCAGGTGTACTGATTTGTATGTGAACGTAAACTTTCTTTTCTCCAGGTAGTGCAACAGTCACTATGTCAGGTGGTAGTTAGTTGCATGTTTTGTTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30676076 209 - 75148670 aactcctggcctcaagtgatccgcccacctcggcctcccaaaatgctgggattacaggcatgaaccactgcactcagtcccaa--ttttttt--aatgcctgctccttcttctgaggcaggtgtactgatttgtatgtgaacgtaaactttcgtttctccaggtagtgcaacagtcaccatgtcaggtggtagttagttgcgtgttttgtttg i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3640232 456 - 94967081 I e canFam3.chr9 57399299 2550 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=807502.000000 s hg38.chr17_GL383566v1_alt 7591 637 + 90219 ataagaaactgctgtcctggcgcagtggctcacgcttgtaatcccagcactttgggaggccaaggcaggagggtcacatgagctcaggagtttgagaccagcct-gggcaacatggtgaaatcccatctttactaaaaatacagaaaattagtcaggcatggtggcatgtgcctgtggtcccggctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggttgcaataagccgacatcacaccactgcaccccagcctgggtaacaaagtgggatcccgtctc---------aaaaaaagaaaagaaactgccagactgttttccagagtaactgtactgttcccgccagcagtgtgtgcgtgatcttatttctctgcatcctcattagcatttggtgttgccaccattttttgtttcagccgttctgatagttaacgcagtgatatcttattgtagtcgtaatgtgaatttccctaatggctcacgatattgaacgtcttttcacgtgcttatttgccatccgtatatcctttttggtaaaatat---ttcatatctcttgcccatgttctaattacattctttgatgcttttctgttgaattACActgagggaggtaagggaaccagccaagca s panTro4.chr17 76218469 637 + 82630442 ataagaaactgctgtcctggcgcagtggctcccgcttgtaatcccagcactttgggaggccaaggcaggagggccacatgagctcaggagttcgagaccagcct-gggcaacatggtgaaatcccatctttactaaaaatacagaaaattagccaggcatggtggcatgtgcctgtggtcccagctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgcaataagccgacatcacaccactgcactgcagcctgggtaacaaagtgggatcctgtctc---------aaaaaaagaaaagaaactgccagactgttttccagagtaactgtaccgttcccgccagcagtgtgtgcgtgatcttatttctctgcatcctcattagcatttggtgttgccaccattttttgttttagccgttctgatagttaacgcagtgatatcttattgtagtcgtaatgtgaatttccctaatggctcacgatattgaacgtcttttcacgtgcttatttgccatccgtatatcctttttggtaaaatat---ttcatatctcttgcccatgttctaatgacattctttgatgcttttctgttgaattACActgagggaggtaagggaaccagccaagca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315941 646 + 73212453 ataagaaactgctgtcctggcgcagtggctcacacctgtaatcccagcactttgggaggccaaggcaggaggatcacttgagctcaggagtttgagaccagcctggggcaacatggtgaaatcctgtctttactaaaaatgcagaaaattagctgggcatggtggcatgtgcctgtggtcccagctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgcaataagccgacatcacaccactgcactccagcctgggtaacaaagtgggatcctgtctc-aaaaaaagaaaaaaagaaaagaaactgccagaccgttttccagagtaactgtaccattcccaccagcagtgtgtgcatgatcttatttctctgcatcctcattagcatttggtgttttcaccattttttgttttagccgttctgatagttaacgcagtgatatcttattgtagttgtaatgtgaatttccctaatggctcacgatattgaacatcttttcacgtgcttatttgccatccgtatatcctttttggtagaatat---ttcatatctcttgcccatgttctaactacattctttgatgcttttctgttgaattCCActgagggaggtaagggaaccagccaagca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3640688 641 - 94967081 acaaaaaaCTGCTGTcctggcgcagtggctcacacctgtaatcccagaactttgggaggccaaggcaggaggatcacttgagctgaggagtttgagaccagcct-gggcaacatggtgaaatcccatctttactaaaaatacagaaaattagccgggcatggtggcatgggcctgtggtctcagctacctaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgcaataagccgacatcacaacactgccctccagcctgggtaacaaagtgggatcttgtctc-aaaa----aaagaaaaaaaagaaactgccagactgttttccagagtaactgtaccgttcccaccagcagtgtgtgcatgatcttattcctctgtgtcctcattagcatttggtgttgccaccattttttgttttaaccgttctgatagttaacgcactgatatctcattgtagttgtaatgtgaatttccctaatggcttgggatattgaacagttttttgcgtgcttacttgccatccgtatatcctttttggtaaaatat---ttcatatcccttgcccatgttctaattacattctttgatgcttttctgttcaattACActgacggaggtaagggaaccagccaagca i nomLeu3.chr14 I 456 C 0 s papAnu2.chr16 68623159 647 + 74645514 ATAGGAAACTGCTGTCCTgacgcagtggctcgcgcctgtaatcccagcactttaggaggccaaagcaggaggatcacttgagctcaggagtttgagaccagcct-gggcaacatggtgaaatcctgtctctactaaaaatacaaaaaattagccaggcatggtgacatgtgcctctggtcccagctacttaggaggctgaagtgggaggatcacttgagcccaggaggtcaaggctgccatgagccgacatcacaccactgcactccagcatgggtaacaaagtgggatcctgtctc-aaaaaaagaaaaaaagaaaagaaactgccagactgttttccagagtAACTGTAccgttcccaccagcagtgtgtgcgTGATCtcatttctctgcatcctcattaGCATTTGGTGTTGCCACCATTTTTTGTTGTAGCCCTTTTGATGGTT-ACGCAGCGATACCTCACTGTAGCTGTAATGTGAATTTCCCTAATGGCTCacgatattgaacatcttttcatgtgcttatttgccatccgtATATCgtttttggtaaaatatttgttcatatcttttgcccatgttCTAAGTCGATTCTTTGATGCTTTTCTGTTGAATTACACTGAGGGAAGTAAGGGAACCAGCCAAGCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30676285 648 - 75148670 ataagaaactgctgtcctgacgcagtggctcacgcctgtaatcccagcactttaggaggccaaggcaggaggatcacttgagctcaggagtttgagaccagcct-gggcaacatggtgaaatcccgtctctactaaaaatacaaaaaattagccaggcatggtgacatgtgcctctggtcccagctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgccatgagccgacatcacaccaccgtactccagcatgggtaacaaagtgggatcctgtctcaaaaaaaaggaaaaaagaaaagaaactgccagactgttttccagagtaactgtaccgttcccaccagcagtgtgtgcgtgatctcatttctctgcatcctcattagcatttggtgttgccaccattttttgttttagcccttctgatggtt-acacagtgatacctcactgtagctgtaatgtgaatttccctaatggctcatgatattgaacatcttttcgtgtgcttatttgccatccgtatatcgtttttggtaaaatatttgttcatatcttttgcccatgttctaattcgattctttgatgcttttcttttgaattACActgagggaggtaagggaaccagccaagca i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 2550 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=165109.000000 s hg38.chr17_GL383566v1_alt 8228 121 + 90219 gattccctggagaagaacattccagaaagagagaagagctaattt-------------------------------------------------aaaggccatga-gacagg----agttcagggtgttcaagataaagcaccagagtcagtgtagccgggcgagt----------------------gagctgcgg s panTro4.chr17 76219106 121 + 82630442 gattccctggagaagaacattccagaaagagagaagagctaattt-------------------------------------------------aaaggccatga-gacagg----agttcagggtgttcaagataaagcaccagagtcagtgtagccgggcgagt----------------------gagctgcgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67316587 166 + 73212453 gattccctggagacgaacattcc-----gaaagaagagctattttaaggTTGTGATATATGATTCCAGTGTGTTCAAATAANNNNNNNNNNTTAaagggctgtgaggacagg----agttcagtgtgttcaagataaagcaccagagtcagtgtagccgggcgagt----------------------gagctgagg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3641329 121 - 94967081 gattccctggagaagaacattccagaaagagagaagagctaattt-------------------------------------------------aaaggccatga-gacagg----agttcagtgtgttcaagataaagcaccagagtcagtgtagccgggcgagt----------------------gagctgcgg i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68623806 121 + 74645514 GATTCCCTGgagaagaacattccagaaagagagaagagctaATTC-------------------------------------------------AAAGGCCATGA-GACAGG----AGTTCCGTGTGTTCAAGATAAAGCACCAGAGTCGGCGTAGCCAGGCGAGT----------------------GAGCTGCGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30676933 121 - 75148670 gattccctggagaagaacattccagaaagagagaagagctaattc-------------------------------------------------aaaggccatga-gacagg----agttccatgtgctcaagataaagcaccagagtcggtgtagccaggtgagt----------------------gagctgcgg i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57401849 141 - 61074082 gatttcc---aggagaacattctagaaaaagggaagtgctaatgc-------------------------------------------------agaggccacgg-gccaggtgtaggttca--gtgttcaagacatagcatca-agtcagtgccactgggtgagtgcccgagaacagaggagctggagggctgtgg i canFam3.chr9 I 2550 C 0 e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=6247.000000 s hg38.chr17_GL383566v1_alt 8349 7 + 90219 --gagaggg s panTro4.chr17 76219227 7 + 82630442 --gagaggg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67316753 7 + 73212453 --gagagGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3641450 7 - 94967081 --gagagga i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616058 7 + 80997621 --GACCGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68623927 7 + 74645514 --GACAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30677054 7 - 75148670 --gacagaA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57401990 7 - 61074082 cagagag-- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I a score=837677.000000 s hg38.chr17_GL383566v1_alt 8356 354 + 90219 aggcaCGTTCACCAAATAATTCATGGCCACCCCCATA---ACCGGCCCCCCTACAGACAGGCGGCACCGCGCAGTTGGCCCAGGCCCCCATGACGggaaggaacgtgggccactcctgggcagaggca-tgaagaacaggtgagcgatgcctggcctgccttctgcttcttgatgatggctggaggccacgcattgagtttgttgaaa--caagattgtggcagcctggatgggtgagtcaccgcgtggagccgctgctgctctggggagctgcctg-gctcgctctggacttagcgtgagcgagaagtaaatctgtagtgtatcgtgtcttggagacatcagggcttatttgtcaccact s panTro4.chr17 76219234 356 + 82630442 aggcaCATTCACCAAATAATTCATGGCCACCCCCATA---ACCGGCCCCCCTACAGACAGGCGGCACCGCGCAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACGTGGGCCACTCCTGGGCAGAGGCA-TGAGGAACAGGTGAGCGATGCCTGGCCTGCCTTCTGCTTCTTGATGATGGCTGGAGGCCACGCATTGAGTTTGTTGAAAGACAAGATTGTGGCAGCCTGGATGGGTGAGTCACCGCGTGGAGCCGCTGCTGCTCTGGGGAGCTGCctg-gctcgctgtggacttagcgtgagcgagaagtaaatctgtagtgtatcgtgtcttggagacatcagggcttatttgtcaccact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67316760 356 + 73212453 AGGCACATTCACCAAATAATTCATGCCTACCCCCATA---ACCAGCCCCCCTACAGACAGGCGGTACCGCGCAGTTGGCCCAGGCCCCCACgaggggaagcaatgtgggccactcctgggcagaggca-tgaggaacaggtgagcgatgcctggcctgccttctgcatcttgatgatcgctggaggccatgcattgagtttgttgaagcacgagattgtggcaacctggatgggtgagtcattgcgtggagccgctgctgctctgaggagctgcctg-gctcgctctggacttagcgtgagcgagaagtaaatctgtagcgtgtcgtgtcttggagacatcagggcttatttgtcaccgct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3641457 356 - 94967081 aggcaCATTCACCAAATAATTCATGCCCACCCCCATG---ACCAGCCCCCCTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACGTGGGCCACTCTTGGGCAGAGGCA-TGAGGAACAGGCGAGTGATGCCTGGCCTGCCTTCTGcatcttgatgattgctggaggccatgggttgagtttgttgaagcacaagattgtggcagcctggatgggtgagtcactgcgtggagccgctgctgctctggggagctgcctg-gctttctctggacttagcatgagcgagaagtaaatctgtagcatataacgtcttggagacatcagggcttatttgtcaccact i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74807276 355 + 80904711 AGGCACGTTCACCAAATAATTCATGCCCA-CCCCATA---ACCAG-CCCCCTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACATGGGCCACTCCTGGGCAGAGGCACTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACGTGTTGAGTTTGTTGAAGCACGAGATTGTGGCAGCCTGGAGGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTGCCTG-GCTCGCTCGGGACTTAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACGTCTTGGAGACATCAGGCCTTATTTGTCACCACT i rheMac3.chr16 I 10 C 0 s macFas5.chr16 74616065 355 + 80997621 AGGCACGTTCACCAAATAATTCATGCCCA-CCCCATA---ACCAG-CCCCCTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGAGAAGGAACATGGGCCACTCCTGGGCAGAGGCATTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACGTGTTGAGTTTGTTGAAGCACGAGATTGTGGCAGCCTGGAGGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTGCCTG-GCTCGCTCGGGACTTAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACGTCTTGGAGACATCAGGCCTTATTTGTCACCACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68623934 355 + 74645514 AGGCACGTTCACCAAATAATTCATGCCCA-CCCCATA---ACCAG-CCCCCTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACATGGGGCACTCCTGGGCAGAGGCATTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACGTGTTGAGTTTGTTGAAGCACGAGATTGTGGCAGCCTGGAGGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTGCCTG-GCTCGCTCAGAACTCAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACATCTTGTAGACATCAGGGCTTATTTGTCACCACT i papAnu2.chr16 C 0 I 22 s chlSab2.chr16 30677061 356 - 75148670 AGCCACATTCGTCAAATAATTAATGCCCACCCCCATA---ACCAG-CCCCCTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACATGGGCCGCTCCTGGGCAGAGGCATTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACATGTTGAGTCTGTTGAAGCACGAGATTGTGGCAGCCTGGAAGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTTCCTG-GCTCGCTCGGGACTTAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACGTCTTGGAGACATCAGGGGTTATTTGTCACCACT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57401997 266 - 61074082 ACCTCGGCTCGCCGGGCA--CCGTGACCG--CCCGTGCCTCCCAG-CCCCCAGCGGCCCG---------------TGGCCC---------------------ACGTGCTCTGCTCC-------AGCCA-TCTGCCACGGAGTGATGATGCC------------------------ACCTCTGGGGG--------------TGGGGAGGCACTCACCCCGGACGGCCTGGGTCGGT--GTCCCCCCGTGGTGTGGCCGCTGCCCTGGAGAGCCGCCCGAGCT---TCAGGGGCTCCTGTGAGTGGGAAGTGAATCTGTGCTGTGTTGTGCCAT---GACGTCGGGGTTTGTCTGTCACCCTT i canFam3.chr9 C 0 C 0 e calJac3.chr5 126503335 3786 + 159171411 I a score=9201.000000 s hg38.chr17_GL383566v1_alt 8710 5 + 90219 gcaaa s panTro4.chr17 76219590 5 + 82630442 gcaaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3641813 5 - 94967081 gcaaa i nomLeu3.chr14 C 0 I 2 s rheMac3.chr16 74807631 5 + 80904711 GCAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616420 5 + 80997621 GCAAA i macFas5.chr16 C 0 I 3 s chlSab2.chr16 30677417 5 - 75148670 GCAAA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57402263 5 - 61074082 GCAGA i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624289 22 + 74645514 I a score=13314.000000 s hg38.chr17_GL383566v1_alt 8715 17 + 90219 aatgagttcattctgac s panTro4.chr17 76219595 17 + 82630442 aatgagttcattctgac i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74807636 17 + 80904711 AATGAGTTCATTCTGAC i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 30677422 17 - 75148670 AATGAGTTCATTGTGAC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57402268 17 - 61074082 AAGGAGCTCATCCTGAC i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3641818 2 - 94967081 I e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624289 22 + 74645514 I e macFas5.chr16 74616425 3 + 80997621 I a score=8065.000000 s hg38.chr17_GL383566v1_alt 8732 25 + 90219 aaatacaGGGATGAGGTCAGCAAAA s panTro4.chr17 76219612 25 + 82630442 aaatacaGGGATGAGGTCAGCAAAA i panTro4.chr17 C 0 I 3 s rheMac3.chr16 74807653 6 + 80904711 AAATAC------------------- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 68624311 25 + 74645514 AAATACAGGGATGAGGTCAGCAAAA i papAnu2.chr16 I 22 I 2 s chlSab2.chr16 30677439 14 - 75148670 AAATGCAGGGATGA----------- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57402285 20 - 61074082 AAATGGAGAAGTGAGGCCAG----- i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3641818 2 - 94967081 I e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616425 3 + 80997621 I a score=91.000000 s hg38.chr17_GL383566v1_alt 8757 1 + 90219 T s nomLeu3.chr14 3641820 1 - 94967081 t i nomLeu3.chr14 I 2 C 0 e canFam3.chr9 57402305 0 - 61074082 C e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C e papAnu2.chr16 68624336 2 + 74645514 I e macFas5.chr16 74616425 3 + 80997621 I e panTro4.chr17 76219637 3 + 82630442 I a score=600.000000 s hg38.chr17_GL383566v1_alt 8758 1 + 90219 G s nomLeu3.chr14 3641821 1 - 94967081 g i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616428 1 + 80997621 G i macFas5.chr16 I 3 C 0 s papAnu2.chr16 68624338 1 + 74645514 G i papAnu2.chr16 I 2 C 0 e canFam3.chr9 57402305 0 - 61074082 C e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C e panTro4.chr17 76219637 3 + 82630442 I a score=28378.000000 s hg38.chr17_GL383566v1_alt 8759 32 + 90219 AGTTCATTCTGACAAATACAGGGATGAGGTCA s panTro4.chr17 76219640 32 + 82630442 AGTTCATTCTGACAAATAGAGGGATGAGGTCA i panTro4.chr17 I 3 C 0 s nomLeu3.chr14 3641822 32 - 94967081 agttcattctgacaaatacaGGGATGAGGTCG i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616429 32 + 80997621 AGTTCATTCTGACAAATACAGGGATGAGGTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624339 32 + 74645514 AGTTCATTCTGACAAATACAGGAATGAGGTCA i papAnu2.chr16 C 0 T 82 e canFam3.chr9 57402305 0 - 61074082 C e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C a score=4730.000000 s hg38.chr17_GL383566v1_alt 8791 5 + 90219 GCAAA s panTro4.chr17 76219672 5 + 82630442 GCAAA i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3641854 5 - 94967081 GCAAA i nomLeu3.chr14 C 0 T 41 s macFas5.chr16 74616461 5 + 80997621 GCAAA i macFas5.chr16 C 0 T 41 s papAnu2.chr16 68624289 5 + 74645514 GCAAA i papAnu2.chr16 T 82 C 0 e canFam3.chr9 57402305 0 - 61074082 C e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C a score=910.000000 s hg38.chr17_GL383566v1_alt 8796 1 + 90219 A s panTro4.chr17 76219677 1 + 82630442 A i panTro4.chr17 C 0 T 41 s nomLeu3.chr14 3641818 1 - 94967081 a i nomLeu3.chr14 T 41 C 0 s macFas5.chr16 74616425 1 + 80997621 A i macFas5.chr16 T 41 C 0 s papAnu2.chr16 68624294 1 + 74645514 A i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57402305 0 - 61074082 C e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C a score=25204.000000 s hg38.chr17_GL383566v1_alt 8797 35 + 90219 ATGAGTTCATTCTGACAAATAGAGGGATGAGGTCA s panTro4.chr17 76219637 35 + 82630442 ATGAGTTCATTCTGACAAATAGAGGGATGAGGTCA i panTro4.chr17 T 41 C 0 s nomLeu3.chr14 3641819 35 - 94967081 atgagttcattctgacaaatacaGGGATGAGGTCG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74807659 13 + 80904711 ----------------------AGGGATGAGGTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616426 35 + 80997621 ATGAGTTCATTCTGACAAATACAGGGATGAGGTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624295 35 + 74645514 ATGAGTTCATTCTGACAAATACAGGGATGAGGTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30677453 5 - 75148670 ------------------------------GGTCA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57402305 9 - 61074082 ----------------AAGTGGGGG---------- i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I a score=776201.000000 s hg38.chr17_GL383566v1_alt 8832 331 + 90219 GCAAAAATGAGTTCATTCTGACAAATACAgggatgaggtcagcgggacttggcgggtgtggggggccggtcaggtcctgcaaggccttat-gggtcttggtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCT----TTTCTCATTTGACTTTGACTTCCTCCCCTC--AACCCCACCTGCTGCAATGAAAGTCGTAATATTTATGAGGTCAAAGGTATTCTC--TTTCTCAGTAGCCTCTGGGTTTTGTATC-AGCTTGGAAACGACTTTTGCATGTTTAATTCTCCTCCTACCTTTTTTTCTCGTACTTTCATGGCTT s panTro4.chr17 76219672 325 + 82630442 GCAAAAATGAGTTCATTCTGACAAATACAgggatgaggtcagcgggacttggcgggtgtggggggccggtcaggtcctgcaaggccttat-gggtgttggtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCT----TTTCTCATTTGACTT------CCTCGCATC--AACCCCACCTGCTGCAATGAAAGTTGTAATATTTATGAGGTCAAAGGTATTCTC--TTTCTCAGTAGCCTCTGGGTTTTGTATC-AGCTTGGAAACGACTTTTGCGTGTTTAATCCTCCTCCTACCTTTTCTTCTCGTACTTTCATGGCTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67317116 329 + 73212453 gcaaaaatgagttcattctgacaaatacagggatgaggtcagagggacgtggtgggtgtggggggccggtcaggtcctgtaaggccttatggggcgttggtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCT----TTTGTCATTTGACTTTGATTTCCTCCCCTC--AACCCCACCTGCTGCAATGAACGTTGTAATATTTATGAGGTCAAAGGTATTCTC--TTTCTCAGTAGCCTCTGGGTTTTGTATC-AGCTTGGAAAGGACTTTTGCATGTTTAatt---ctcctaccttttcttctcgtactttcatggctt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3641854 324 - 94967081 GCAAAAATGAGTTCATTCTGACAAATACAgggatgaggtcagagggacgtggcgggtgtggggggccggtcaggtcctgcaaggtcttat-gggtcttcgtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCT----TTTGTCATTTGACTT------CCTCCCCTTAAAACCCCACCTGCTGCAATGAAAGTTGTAATGTTTATGAGGTCAAAGGTATTCTC--TTTCTCAGTAGCATCTGGGTTTTGTATC-AGCTTGGAAAGGACTTTTGCATGTTTAatt---ctcctaccttttcttctcgtactttcatggctt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74807672 328 + 80904711 GCAAAAATGAGTTCATTCTGACAAATACaggaatgaggtcagagggacgaggcgggtgtagggggccggtcaggtcctgcaaggccttat-gggtcttggtaaggacaccagctttttggcttgagttctgagtgaggtgggaaacagctgCCT----tttgtcatttgactttgacttcatcccctc--acccccaccccctgcagtgaaagttgtaatttttatgaggtcaaatgtattctc--ttactcagtagcctctgggttttgtatc-agcttggagacgacttttgcatgtttaatt---ttcctaccttttcttctggtactttcatgactt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616461 328 + 80997621 GCAAAAATGAGTTCATTCTGACAAATACaggaatgaggtcagagggacgtggcgggtgtagggggccggtcaggtcctgcaaggtcttat-gggtcttggtaaggacaccagctttttggcttgagttctgagtgaggtgggaaacagctgCCT----TTTGTCATTTGACTTTGACTTCATCCCCTC--ACCCCCACCCCCTGCAGTGAAAGTTGTAATTTTTATGAGGTCAAATGTATTCTC--TTACTCAGTAGCCTCTGGGTTTTGTATC-AGCTTGGAGAGGACTTTTGCATGTTTAATT---TTCCTACCTTTTCTTCTGGTACTTTCATGACTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624330 322 + 74645514 GCAAAAATGAGTTCATTCTGACAAATACAGGAATGAGGTCAGAGGGGCGTGGTGGGTGTAGGGGGCCGGTCAGGTCCTGCAAGGCCTTAT-GGGTCTTGGTAAGGACACCAGCTTTTTGGCTTGAGTTCTGAGTGAGGTGGGTAACAGCTGCCT----TTTGTCA------TTTGACTtcatcccctc--acccccaccccctgcagtGAAAGTTGTAATTTTTATGAGGTCAAATGTATTCTC--TTACTCAGTAGCCTCTGGGTTTTGTATC-AGCTTGGAGAGGACTTTTGCATGtttaatt---ttcctaccttttcttctggtactttcatgactt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30677458 327 - 75148670 GCAAAAATGAGTTCATTCTGACAAATGCAgggatgaggtcagagggatgtggcgggtgta-ggggccggtcaggtcctgcaaggccttat-gggtctctgtaaggacaccagctttttggcttgagttctgagtgaggtgggaaacagctgCCT----TTTGTCATTTGACTTTGACTTCATCCCCTC--ACCCCCACCCCCTGCAGTGAAAGTTGTAATTTTTATGAGGTCAAATGTATTCTC--TTACTCAGTAGCCTCTGGGTTTTGTATC-AGCTTGGAGAGGACTTTTGCATGTTTAATT---TTCCTACCTTTTCTTCTGGTACTTTCATGACTT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57402314 245 - 61074082 ---------------------------CAGGG----------------------------------CGGCCAGGCCCCAAAAGGCACCAG-GGGTCCTT-CGGGGCCACCAGC-TTGCAACTTCGACTCTGCACGAGATGGG-Agcagctgtcttctgtctgtcacgtggcttaggctttttgtttgt-----------ttttgagcagaaaat-----tttttatgacatgaaacatattttcctttccttaattgcctctggcttttacatcttattcagaaaggacgtccccaggtgaaatt---ctcctacattttctt------------tggctt i canFam3.chr9 C 0 C 0 e calJac3.chr5 126503335 3786 + 159171411 I a score=256912.000000 s hg38.chr17_GL383566v1_alt 9163 119 + 90219 TTTAAAAttttatttttattttgtttagaggcagagtctcactcaaggctggagtgcagtggtgccatctcggctcactgcaaccttcccctccgagttcaagtgattgtcgtgcctca s panTro4.chr17 76219997 119 + 82630442 TTTAAAAttttatttttattttgtttagaggcagagtctcactcaaggctggagtgcggtggtgtcatctcggctcactgcagccttcccctccgagttcaagcgattgtcctgcctca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67317445 119 + 73212453 ttttaaattttatttttattttgtttagaggcagagtctcactccaggctggagtgcagtggtgtgatattgacccactgcaaccttcccctcccagttcaagcgattctcctgcctca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642178 119 - 94967081 ttttaaattttatttttattttgtttagaggcagagtctcactccaggctggagtgcagtggtgcgatctcggctcactgcaaccttcccctcccagttcaagcaattcttctgcctca i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808000 119 + 80904711 tttaaaattttatttttattttttttggaggcagagtctcactccattctggagtgcagtggtgtgatctcggctcactgcaaccttcccctcctagttcaagcgattctcctgcctca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616789 119 + 80997621 TTTAAAAttttatttttattttttttggaggcagagtctcactccattctggagtgcagtggtgtgatctcggctcactgcaaccttcccctcctagttcaagcgattctcctgcctca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624652 119 + 74645514 tttaaaattttgtttttattttttttggaggcagagtctcactccattctggagtgcactggtgcgatctcggctcactgcaaccttcccctcctagttcaagcgattctcctgcctca i papAnu2.chr16 C 0 I 50 s chlSab2.chr16 30677785 103 - 75148670 TTTAAAAttttatttttattttttttggaggcagagtctcgctccattctggagtgcagtggtgctctctcggctcactgcaaccttcccctcctagttcaag---------------- i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57402559 0 - 61074082 C e calJac3.chr5 126503335 3786 + 159171411 I a score=309710.000000 s hg38.chr17_GL383566v1_alt 9282 172 + 90219 gcctcccaagtagctgggattacaggcacgtgccatgatgcccagctaatttttgtatctttagtagagacagggtttcactgcgttggccaggctggtctcgaactcaagtgatcctcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccgg s panTro4.chr17 76220116 172 + 82630442 gcctcccaagtagctgggattacaggcacgtgccatgatgcccagctaatttttgtatctttagtagagacggggtttcactgcgttggccaggctggtctcgaactcaagtgatcctcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67317564 172 + 73212453 gcctcccaagtagctgggattacaggcacgtgccacgatgcccagctaatttttgtatctttagtagagacggggtttcaccgcgttggccaggctggtctcgaactcaagtgatcctcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccgg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642297 172 - 94967081 gcctcccaagtaactgggattacaggcacgtgccacgatgcccagctaatttttgtatctttagtagagacagggtttcaccgcgttggccaggctggtctcgaactcaagtgaccctcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccag i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808119 171 + 80904711 gcctcccaagt-gctgggattacaggcacgtgccatgatgcccagataatttttgtatctttagtagagatggggtttcaccacgttggtcaggctggtctcgaactcaagtgatcctcccgctttggcctcccaaagtgctgggattacaggcgtgagccatcgcacccgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616908 171 + 80997621 gcctcccaagt-gctgggattacaggcacgtgccatgatgcccagataatttttgtatctttagtagagatggggtttcaccacgttggtcaggctggtctcgaactcaagtgatcctcccgctttggcctcccaaagtgctgggattacaggcgtgagccatcgcacccgg i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30677888 160 - 75148670 ------------gctgggattacaggcacatgccatgattcccagctaatttttgtttctttagtagagatggggtttcaccacattggtcaggctggtctcgaactcaagtgatcctcccgctttggcctcccaaagtgctgggattacaggcgtgagccaccgcacctgg i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57402559 0 - 61074082 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624771 50 + 74645514 I a score=301843.000000 s hg38.chr17_GL383566v1_alt 9454 147 + 90219 ccTTCATGGCTTTATTTTTTTACACTGAAATCTCTGATGCATCTGG---TGGGTTTTGTGTAAGGAGTGAGGTCGAGCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGTCTGCATGACAAAGCTTATGGCCAGCTCTTTGAAA--C s panTro4.chr17 76220288 147 + 82630442 ccTTCATGGCTTTATTTTTTTACACTGAAATCTCTGATGCATCTGG---TGGGTTTTGTGTAAGGAGTGAGGTCGAGCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGTCTGCATGACAAAGCTTATGGCCAGCTCTTTGAAA--C i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67317736 148 + 73212453 ccttcatggctttatttttttacaatgaaatctctgatgcatctgg---tgagttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCGTGACAAAGC-TATGGCCAGCTCTTTGAAACTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642469 149 - 94967081 ccttcatggctttatttttttacactgaaatctctgatgcatctgg---tgagttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCATGACAAAGCTTATGGCCAGCTCTTTGAAACCC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808290 149 + 80904711 ccttcatggctttatttttttacattgaaatccctgatgcatctgg---tgggttttgtgtaaggagtgaggtcgagcttTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCATGACAAAGGTTATGGCCAGCTCTTTGAAACCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617079 149 + 80997621 ccttcatggctttatttttttacattgaaatccctgatgcatctgg---tgggttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCATGACAAAGGTTATGGCCAGCTCTTTGAAACCC i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678048 149 - 75148670 ccttcatggctttatttttttacattgaaatctccgatgcatctgg---tgggttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCGTGACAAAGGTTATGGCTAGCTCTTTGAAACCC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57402559 138 - 61074082 cttttgtggtttta-ttctttacatttaaatctctggcgcatctgatgttggtttttgtgaCACGA-TGA---------CTTCATTAATCCT-AATGGGTCTCCAGATTTGGTGGCTCTAGGACAGAACTCACTTCCAGCTCTTTAGAAC-- i canFam3.chr9 C 0 I 109 e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624771 50 + 74645514 I a score=258950.000000 s hg38.chr17_GL383566v1_alt 9601 136 + 90219 TCTGGAGAAACCCTTTAGGGAACTGATGCTGGGTCTAGGGTGGGAAGGGCATC-GGGGTGGTG--AGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCTGGGTGGCTGCCTG-GGACAATTAGACAATTATG s panTro4.chr17 76220435 136 + 82630442 TCTGGAGAAACCCTTTAGGGAACTGATGCTGGGTCTGGGGTGGGAAGGGCATC-GGGGTGGTG--AGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGCCCGGCTGGGTGGCTGCCTG-GGACAATTAGACAATTATA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67317884 136 + 73212453 TCTGGAGAAACCCTTTAGGGAACTGATGCTGGGTCTGGGGTGGGAAGGGCATC-GGGGTGGTG--AGAGGAGCCCCAGCAGATCACCAGAGAGGGCCAGGGCCGGCTGGGTGGCTGCCTG-GGACAATTAGACAATTATA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642618 137 - 94967081 TCTGGAGAAACCCTTTAGGGAACTGATGCTGGATCTGGGGTGGGAAGGGCATCAGGGGTGGTG--AGAGGAGCCCCAGCAGATCACCAGAGAAGGCAAGGGCCGGCTGGGTGGCTACCTG-GGACAATTAGACAATTATA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808439 130 + 80904711 TCTGGAGAAACCCTTTAGGGAA------CTGGGTCTGGGGTGGGAAGGGCATCAGGGGTGGTG--AGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCT-GGTGGCTGCCTG-GGACAATTAGACAATTATA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617228 130 + 80997621 TCTGGAGAAACCCTTTAGGGAA------CTGGGTCTGGGGTGGGAAGGGCATCAGGGGTGGTG--AGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCT-GGTGGCTGCCTG-GGACAATTAGACAATTATA i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678197 135 - 75148670 TCTGGAGAAACCCTTTAGGGAACCGATGCTGGGTCTGGGGTGGGAAGGGCATC-GGGGTGGTG--AGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCT-GGTGGCTGCCTG-AGACAATTAGACAATTATA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57402806 134 - 61074082 CCTAAAAGAAGCCTCTTGAGAAATGTTTAGGGACTGTGGCTGGTCGGGGCAAG-AAGGCAGAGCTGGATGGCCGCCGGCAG-----CGGGGAGGTCCGGAACCAGCCGGGCAGCTGCCTGTGGACAGTGAGACAGTCCTA i canFam3.chr9 I 109 C 0 e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624771 50 + 74645514 I a score=16044.000000 s hg38.chr17_GL383566v1_alt 9737 8 + 90219 AGGAGTGT s panTro4.chr17 76220571 8 + 82630442 AGGAGTGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318020 8 + 73212453 AGGAGTGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642755 8 - 94967081 AGGAGTGT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808569 8 + 80904711 AGGAGTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617358 8 + 80997621 AGGAGTGT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678332 8 - 75148670 AGGAGTGT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57402940 0 - 61074082 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624771 50 + 74645514 I a score=3710.000000 s hg38.chr17_GL383566v1_alt 9745 3 + 90219 GGT s panTro4.chr17 76220579 3 + 82630442 AGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318028 3 + 73212453 GGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642763 3 - 94967081 GGT i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74617366 3 + 80997621 GGT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678340 3 - 75148670 GGT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57402940 0 - 61074082 C e rheMac3.chr16 74808577 0 + 80904711 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624771 50 + 74645514 I a score=204573.000000 s hg38.chr17_GL383566v1_alt 9748 128 + 90219 ggccaggcgtggtggctcatgcccgtaatcccagtactctgggaggccaaagcgggtgcatcacctgaggttaggagttcgaggccagcctggccaacatggtgaaaactcctctctacaaaaaat--------ta s panTro4.chr17 76220582 128 + 82630442 ggccaggcgtggtggctcatgcccgtaatcccagtactctgggaggccgaagcaggtgcatcacctgaggttaggagttcgaggctggcctggccaacatggtgaaaactgctctctacaaaaaat--------ta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318031 128 + 73212453 ggctgggcgtggtggctcatgcctataatcccagtactgtgggaggctgaagcgggtgcatcacctgaggttaggagttcgaggccagcctggccaacatggtgaaaactcgtctctacaaaaaat--------ta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642766 128 - 94967081 ggccgggtgtggtggctcatgcctgtaatcccagtactctgggaggccgaagtgggtgcatcacctgaggttaggagttcgaggccagcctgggcaacatggtgaaaactcgtctctataaaaaat--------ta i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74617369 128 + 80997621 ggtcgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaagtgggtgtatcacctgaggttaggagttcgaggccagtctggccaacatggtgaaacctcatctctacaaaaaat--------ta i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678343 128 - 75148670 ggttgggcgtggtggctcatgcctgtaattccagcacttcgggaggccgaagtgggtgtatcacctgaggttaggagttcaaggccagcctggccaacatggtgaaacctcatctctacaaaaact--------ta i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507121 136 + 159171411 ggccgggcgcagtggctcacgcctgtaagcccagcactttgggaggttgaggtgggcggatcacttgaggtcaggagttcgagacccatttggccaacatggcaaactcctgtctctactaaaaatacaaaatgta i calJac3.chr5 I 3786 C 0 e canFam3.chr9 57402940 0 - 61074082 C e rheMac3.chr16 74808577 0 + 80904711 C e papAnu2.chr16 68624771 50 + 74645514 I a score=7294.000000 s hg38.chr17_GL383566v1_alt 9876 3 + 90219 gct s panTro4.chr17 76220710 3 + 82630442 gct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318159 3 + 73212453 gct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642894 3 - 94967081 gct i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808577 3 + 80904711 gct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617497 3 + 80997621 gct i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678471 3 - 75148670 gct i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507257 3 + 159171411 gcc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57402940 0 - 61074082 C e papAnu2.chr16 68624771 50 + 74645514 I a score=431162.000000 s hg38.chr17_GL383566v1_alt 9879 160 + 90219 gggtgtggtgatgggcacctgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggaggcggaggttgcagtgagcggagatcacaccattgcactcaagcctgggcaacaagcgcgaaact--gtctccaaaag-aaaaaaaaaa--------GG s panTro4.chr17 76220713 165 + 82630442 gggtgtggtgatgggcacctgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggaggcggaggttgcagtgagcggagatcacaccattgcactcaagcctgggcaacaagcgcgaaactctgtctccaaaag-aaaaaaaaaa-----aaaGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318162 168 + 73212453 gggcatggtgat-ggcacctgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggaggcggaggttgcagtgaacggagatcacaccattgcactcaagcctgggcaacaagcgcgaaactctgtctccaaaag-aaaaagaaaa-aaaaaaaGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642897 170 - 94967081 gggtgtggtgacgggcacttgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggagacggaggttgcagtgagctgagatcacaccattgcactcaagcctgggcaacaagcgtgaaactctgtctccaaaag-aaaaaaaaaaaaaaaaaaGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808580 161 + 80904711 gggtgtggtgatgggcacctgtaatctcagttacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggtttcagtgagccgagatcgcaccataggactcaaacctgggcaac--gagcgaaactctgtctccaaaag-aaaaaaaaaa-------aGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617500 161 + 80997621 gggtgtggtgatgggcacctgtaatctcagttacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggtttcagtgagccgagatcgcaccataggactcaaacctgggcaac--gagcgaaactctgtctccaaaag-aaaaaaaaaa-------aGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624821 164 + 74645514 gggtgtggtgatgggcacctgtaatctcagttacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggttgcagtgagccgagatcgcaccataggactcaaacctgggcaacaagagcgaaactctgtctccaaaagaaaaaaaaaaa-------agg i papAnu2.chr16 I 50 C 0 s chlSab2.chr16 30678474 162 - 75148670 gggtgtggtgatgggcacctgtaatctcagttactt-ggaggctgagacaggagaatcacttgaacttgggaggcagaggttgcagtgagctgagatcgcaccataggactcaaacctgggcaacaagagcgaaactccgtctccaaaag-aaaaaaaaaa-------aGG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507260 154 + 159171411 acacgcggtggcgtacac-ggtagttccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaagctgcagtgagtcaagatcatgccattgcactccagcctggacaacaagagcaaaactccatctccaaaaa---------aa-------aag i calJac3.chr5 C 0 C 0 e canFam3.chr9 57402940 0 - 61074082 C a score=170788.000000 s hg38.chr17_GL383566v1_alt 10039 65 + 90219 AGTGTGGAAATAACCCAGGAATAAAAAAAACACAGTGCTCACATCACATTGTGTAGCCCCAGCGT s panTro4.chr17 76220878 61 + 82630442 AGTGTGGAAATAACCCAGGAATAAAA----CACAGTGCTAACATCACATTGTGTAGCCCCAGCGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318330 61 + 73212453 AGTGTGGAAATATCCCAGGAATAAAA----CGCAGTGCTAACATCACATTGTGTAGCCCCAGCGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643067 61 - 94967081 AGTGTGGAAATATCCCAGGAATAAAA----CACAGTGCTAACAACACATTGCGTAGCCCCAGCGT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808741 61 + 80904711 AGTGTGGCAATATCCCAGGAATAAAG----CACAGTGCTAACATCACATTGCACAGCCCCAGCGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617661 61 + 80997621 AGTGTGGCAATATCCCAGGAATAAAA----CACAGTGCTAACATCACATTGCACAGCCCCAGCGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624985 61 + 74645514 agtgtggcaatatcccaggaataaag----caCAGTGCTAACATCACATTGCACAGCCCCAGCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30678636 61 - 75148670 AGTGTGGCAATATCCCAGGAACAAAA----CACAGTGCTAACATCACATTGCACAGCCCCAGCGT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507414 47 + 159171411 aGTGTGGAAATATCCTAGGAATA-------C----------CATCACCTTGCAGAGCCCCA-CAG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57402940 56 - 61074082 AGTGTTGAAATAGCGCAGGAATAAAT----TGCAGCACTAATGCCA-----GGCAGGCCCGGCGT i canFam3.chr9 C 0 I 25 a score=45696.000000 s hg38.chr17_GL383566v1_alt 10104 14 + 90219 GAAGGGGTTTTTGG s panTro4.chr17 76220939 14 + 82630442 GAAGGGGTTTCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318391 14 + 73212453 GAAGGTGTTTCTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643128 14 - 94967081 GAAGGGGTTTCTGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808802 14 + 80904711 GAAGGGGTTTCTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617722 14 + 80997621 GAAGGGGTTTCTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68625046 14 + 74645514 GAAGGGGTTTCTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30678697 14 - 75148670 GAAGGGGTTTCTGG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507461 14 + 159171411 GAAGGGGTTTCTGG i calJac3.chr5 C 0 C 0 e canFam3.chr9 57402996 25 - 61074082 I a score=1411155.000000 s hg38.chr17_GL383566v1_alt 10118 434 + 90219 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACATGACAAGAG-TCTTTTCTGAGGCACCCTGTCTGC-GGC--ACAGCTGCCTGGGTG---------------------CCCGAGGAACAGCCCTGTGTCAGCATTTAGTCCGCTGAAACATGCAGCTAAATAACCAGCCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCGTGTGTTTTTGGCCAGTGCCATTTCCGGGCCCCTGGAGTTGATGGACATTTCCTGTGCGGGGTCTGATT-CCCACTACAGATTTGAAAGAGGCATGCAGATTTT s panTro4.chr17 76220953 434 + 82630442 CCACCACAGGGAGCAGAATGTCCTCTGGTGGACATGACAAGAG-TCTTTTCTGAGGCACCCTGTCTGC-GGC--ACCGCTGCCTGGGTG---------------------CCCGAGGAACAGCCCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAGCCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAGCATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCATAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCATGTGTTTTTGGCCAGTGCCATTTCCGGGCCCCTGGAGTTGATGGACATTTCCTGTGCGGGGTCTGATT-CCCACTACAGATTTGAAAGAGGCATGCAGATTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318405 435 + 73212453 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACATGACAAGAG-TCTTTTCTGAGGCGCCCTGTCTGT-GGC--ACAGCTGCCTGGGTG---------------------CCCGAGTAACACCCCTGTGTCAGCATTTAGTCCGTTGGAACACGCAGCTAAGTAACCAACCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACTGCCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCCGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCGTGTGTTTTTGGCCAGTGCCATTTCCGGGCCCCTGGAGTGGATGGACATTTCCTGTGCGGGGTCTGATT-CCCACTACAGATTTGAAAGAGGCATGCAGATTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643142 434 - 94967081 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACATGACAAGGG-TCTTTTCTGAGACGCCCTGTCTGT-GGC--ACAGCTGCCTGGGTG---------------------CCCGAGTAACACCCCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCATGTGTTTTTGGCCAGTGCCATTTCCAGGCCCCTGGAGTTGACGGACATTTCCTGTGTGGGGTCTGATT-CCCACTACAGCTTTGAAAGAGGCATGCAGATATT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808816 433 + 80904711 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACGTGACAATGG-TCTTTTCTGAGGCGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCTGGGTAACA--CCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCTGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCTGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACCGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGAGGCATGCGGAtttt i rheMac3.chr16 C 0 T 13046 s macFas5.chr16 74617736 433 + 80997621 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACGTGACAATGG-TCTTTTCTGAGGCGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCTGGGTAACA--CCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCTGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGTGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCCGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACCGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGAGGCATGCGGAtttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68625060 433 + 74645514 CCACCACAGGGAGCAGAATGTCCTTTGGTGGATGTGACAATGG-TCTTTTCTGAGGCGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCCGGGTAACA--CCCGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCCGAGAacaagtgatttatttttattgcttcatttttaaaCACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCCGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACTGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGAGgcatgcagatttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30678711 433 - 75148670 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACGTGACAGTGG-TCTTTTCTGAGGTGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCCGGGTAACA--CCCGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCATAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCCGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACTGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGGGGCATGCAGAtttt i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507475 423 + 159171411 CCACCGCAGGCAGCAGAATGTCCTTTGGTGGATGTGACAAGGG-TCTTTTCTGAGGCACCCTGTCTGCAG----------GCCCGGGGG---------------------CCTGGGTAACA-CCCTGTGTCAGCTTTTGGTCAGTTGAAACACGCAGCTAAATAACCAACTGGCTGTCTTCCAAGAATAAGTGATTTATTTTTATTGCATCATTTTTAAACGCT-TCAACATTCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGGAAGCTGAAGAGAAAATGCGAGCTGGAGAAGAGTGGGGC-TGCTTTGCTGGAATGTTCTTCCGGAAAGCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCAGCATTGTGTCTGGGCCC--AGAGATGATGGACGTTTCCTGTGCAGGGTCTGATT--CCACTGTGGATTTGAAAGAGGCATGCAGATTTT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57403021 430 - 61074082 CCACTGCAGCCA--AGAGGGGCCTCGCGTGGACCCGAAGAGGGCTCTTCCCCGTGGGACCGTGTCCCCGGGCCTGCTGCTGCCTGCGCAGGTTGTGCAGCTCGCAGGCCCTCCCGTCAGCATTCCCAGGTCAGCATTTATTCAGCAGAAACATGCAGCCTAATAACCAACAGGCTGTCTTCCGAGAACAAGTGATTTA-TTTTATTGCCTCATTTTTAAACACT-TCAGCGTGCCTCCCAAGAAGCTGTTTGGTTTGGAAAGTCAC------------AAGAGAAGATGCAAACTG-----AAGTGGGGAGCACTTCTCTG---CACTTGCCGGGGACGCCAGCCTGCTCTGCGGGAAGGGTG-----GGGGAGCGGC-CGTCGGGGCCGCTGGACTTGGCGGAC-CATCCTGCTTGGGCTCTGACTCCCCAGTGAAGGTCTGAAACA-GCACATGGGTTGT i canFam3.chr9 I 25 C 0 a score=7117.000000 s hg38.chr17_GL383566v1_alt 10552 6 + 90219 TATTTT--- s panTro4.chr17 76221387 6 + 82630442 TATTTT--- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318840 6 + 73212453 TATTTT--- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643576 6 - 94967081 TATTTT--- i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74618169 6 + 80997621 tttttt--- i macFas5.chr16 C 0 T 13174 s papAnu2.chr16 68625493 6 + 74645514 tttttt--- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30679144 6 - 75148670 tttttt--- i chlSab2.chr16 C 0 T 16043 s calJac3.chr5 126507898 6 + 159171411 TATTCT--- i calJac3.chr5 C 0 I 1 s canFam3.chr9 57403451 6 - 61074082 ---TGTGAA i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74809249 13046 + 80904711 T a score=1965.000000 s hg38.chr17_GL383566v1_alt 10558 4 + 90219 AAAA s panTro4.chr17 76221393 4 + 82630442 AAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318846 4 + 73212453 AAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643582 4 - 94967081 AAAA i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68625499 4 + 74645514 gaga i papAnu2.chr16 C 0 T 15457 s calJac3.chr5 126507905 3 + 159171411 AAA- i calJac3.chr5 I 1 C 0 s canFam3.chr9 57403457 4 - 61074082 AAGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74809249 13046 + 80904711 T e chlSab2.chr16 30679150 16043 - 75148670 T e macFas5.chr16 74618175 13174 + 80997621 T a score=2950.000000 s hg38.chr17_GL383566v1_alt 10562 7 + 90219 AAACTAA- s panTro4.chr17 76221397 7 + 82630442 ATACTAA- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318850 7 + 73212453 AAACTAA- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643586 7 - 94967081 AAACTAA- i nomLeu3.chr14 C 0 C 0 s calJac3.chr5 126507908 7 + 159171411 CAACTCA- i calJac3.chr5 C 0 C 0 s canFam3.chr9 57403461 7 - 61074082 -AAATAAA i canFam3.chr9 C 0 T 9057 e rheMac3.chr16 74809249 13046 + 80904711 T e chlSab2.chr16 30679150 16043 - 75148670 T e papAnu2.chr16 68625503 15457 + 74645514 T e macFas5.chr16 74618175 13174 + 80997621 T a score=234373.000000 s hg38.chr17_GL383566v1_alt 10569 292 + 90219 ATAGAACCTGGtagccagacatggtggcgcgagcctgcagtctcagctacttgtgagactgaggtggaagaatcgcttgagcccaggatgtggaggttgtagcgagccaagattgcagcactgcactccagcctaggtgacagaacaagagaccctctctcaaaaaacaaa----caggctgggcatggtggctcatgcccataatcccagcagtttgggagactgagacaggtgcatcacctgaggtcaggaattcgagaccagcctggccaacatggcgaaa-ccccctctacta s panTro4.chr17 76221404 293 + 82630442 ATAGAACCTGGtagccagacatggtggcgcgagcctgcagtctcagctacttgtgagactgaggtggaagaatcgcttgagcccaggatgtggaggttgtagcgagccaagattgcagcactgcactccagcctaggtgacagaacaagagaccctgtctcaaaaaacaaa----caggctgggcatggtggctcatgcccataatcccagcagtttgggagactgagacaggtgcatcacctgaggtcaggaattcgagaccagcctggccaacatggcgaaacccccctctacta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318857 292 + 73212453 AAAGAACCTGGtagccagacatggtggcgcgagcctgcagtctcagctacttgtgagactgaggtgggagaaacgcttgagcccaggacgtggaggttgtagtgagccaagattgcagcactgcactccagcctaggtgacagaacaagagaccctgtctcaaaaaacaaa----caggctgggcatggtgactcatgcccataatcccagcactttgggaggctgagagaggtgtatcacctgaggtcaggaattcgagaccagcctgaccaacatagcgaaa-ccccctccacta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643593 292 - 94967081 ATAGAACCTGGtagccagacgtggtggcgcgagcctgcagtctcagctacttgtgagactgaggtggaggaatcgcttgagcccaggacgtggaggttgtagtgagccaagattgcagcactgcactccagcctgggtgacagaacaagagaccctgtctcaaaGCACAAA----CAggctgggcatggtgactcatgcccataatcccagcagtttgggaggctgaggcaggtggatcacctgagatcaggaattcgagaccagcctggccaacatggcgaaa-ccccctctatta i nomLeu3.chr14 C 0 I 311 s calJac3.chr5 126507915 289 + 159171411 ATAGAATGTTGtagccagacttggtggcgagagcctgtagtctcagctactagtgaggctgaggtgggagaatcccttgagcccaggacgtggaggttgcagtaatccaagatcatgccactgcactccagcctaggtgacagaacgagacaccctgtctcaaaaaacaaaCAGGCAggctggacacggtggct------tacaatcccagcagtttgggaggctgaggc-ggtgcatcacttgaggtcaggaatttgagaccaacctggccaacattgcaaaa-ctgtctctacta i calJac3.chr5 C 0 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e chlSab2.chr16 30679150 16043 - 75148670 T e papAnu2.chr16 68625503 15457 + 74645514 T e macFas5.chr16 74618175 13174 + 80997621 T a score=3276.000000 s hg38.chr17_GL383566v1_alt 10861 6 + 90219 aaaata s panTro4.chr17 76221697 6 + 82630442 aaaata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319149 6 + 73212453 aaaata i ponAbe2.chr17 C 0 C 0 s calJac3.chr5 126508204 6 + 159171411 aaaata i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3643885 311 - 94967081 I e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e chlSab2.chr16 30679150 16043 - 75148670 T e papAnu2.chr16 68625503 15457 + 74645514 T e macFas5.chr16 74618175 13174 + 80997621 T a score=49761.000000 s hg38.chr17_GL383566v1_alt 10867 69 + 90219 caaaaattagccaggcgtggtggcaggcgcctgtaatcccagctgctcaggaggctgaggcaggagaat s panTro4.chr17 76221703 69 + 82630442 caaaaattagccaggcgtggtggcaggcgcctgtaatcccagctgctcaggaggctgaggcaggagaat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319155 69 + 73212453 caaaaattagccaggcatggtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644196 69 - 94967081 caaaaattaaccagacgtgggggcagacgcctgtaatcccagctactcgggaggctgaggcaggagaat i nomLeu3.chr14 I 311 C 0 s calJac3.chr5 126508210 62 + 159171411 -------cagccgggtgtggtgactcaagcctgtaatcccagcactttgggaggctgaggcaggtggat i calJac3.chr5 C 0 I 325 e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e chlSab2.chr16 30679150 16043 - 75148670 T e papAnu2.chr16 68625503 15457 + 74645514 T e macFas5.chr16 74618175 13174 + 80997621 T a score=1077.000000 s hg38.chr17_GL383566v1_alt 10936 3 + 90219 tga s panTro4.chr17 76221772 3 + 82630442 tga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319224 3 + 73212453 tga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644265 3 - 94967081 tgc i nomLeu3.chr14 C 0 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e calJac3.chr5 126508272 325 + 159171411 I e chlSab2.chr16 30679150 16043 - 75148670 T e papAnu2.chr16 68625503 15457 + 74645514 T e macFas5.chr16 74618175 13174 + 80997621 T a score=199340.000000 s hg38.chr17_GL383566v1_alt 10939 280 + 90219 ttgaacctgggaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacaagaccgaaactgcgtctcaagaaaaa-aacaaaaaacaaaacaaaagccca----aaacaaa-aaacccaaaat-aaaaAAAACAAACTAAAGAATATTGGTTTTTCTGTCTCTCAAAATATGTAGTGAACATCTCTCAATCTAAGGGGCATTGTAGTGTTAGCCAGCTGAGGTAAAAAGGCAAGACCCATTCGTCTCCAAGTGTCCTAGCTGGGGCTCTT s panTro4.chr17 76221775 281 + 82630442 ttgaacctgggaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacaagaccgaaactgcgtctcaagaaaaa-aacaaaaaacaaaacaaaaaccca----aaacaaa-aaacccaaaataaaaAAAAACAAACTAAAGAATATTAGTTTTTCTGTCTCTCAAAATATGTAGTGAACATCTCTCAATCTAAGGGGCATTGTAGTGTTAGCCAGCTGAGGTAAAAAGACAAGACCCATTTGTCTCCAACTGTCCTAGCTGGGGCTGTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319227 284 + 73212453 ttgaacctgggaggcagaggttgcagtgagccgagattgtgctactgcactccagcctgggtgacaagaccaaaactgtgtctcaagaaaaa-aacaaaaaacaaaacaaaaacccaaaacaaacaaa-aaaCCCAAAAT-AAAAAAAACAAACTAAAGAATATTGGTTTTTCTGTCTCTCAAAATATGTAGTGAACATGTCTCGATCTAAGGGGCATTGTAGTGTTAGCCAGCTGAGGTAAAAAGACAAGACCCATTCGTCTCCAAGTGTCCTAGCTGGGGCTCTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644268 280 - 94967081 ttgaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgagtgacaagactgaaactgcatctcaataaaaacaaaacaaaacaaaacaaaaaCCCA----AAACAAA-CAACCCAAAAT--AAAAAAACTAACTAAAGAATATTGGTTTTTCTGCCTCTCCAAATGTGTAGTGAATATCTCTCGATCTAAGGGGCATTGTCGTGTTAGCCAGCTGAGGTAAAAAGACAAGACCCATCCGTTTCCAAGTGTCCTAGCTGGGGCTCTT i nomLeu3.chr14 C 0 C 0 s calJac3.chr5 126508597 262 + 159171411 ttgaacccgggaggtggaggttgcagacagccgagatagcaacactgcactccagcctgggcaacaagagtgaaactgcgtctcaaaacaac-aacaacaaaca-----------ca----aaaCAGACAAAACCAAAAT-ACAAAAAAC-AACTAAAGAACACTGGTTTCTCTGTCTC---AAATAGGTACTGAACATCTCCCAATCTAAGGAACACTG--GTGTTAGCCAGCTGAGGT-AAAAGACGAGA-CCATCCATCTCCAAGCATCCTGGCTGAGGCtctt i calJac3.chr5 I 325 T 17476 e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e chlSab2.chr16 30679150 16043 - 75148670 T e papAnu2.chr16 68625503 15457 + 74645514 T e macFas5.chr16 74618175 13174 + 80997621 T a score=183997.000000 s hg38.chr17_GL383566v1_alt 11219 389 + 90219 AAAGAACCAGCAAggccaggtgcagtggctcatgcctgtaatcacagcactttggaaggccaaggtgggaggatcatttgagcccaggagttcaagaccaacctgggcaacatagggagactttgtcgctaccaaaaaaatacaaaaaaattagccggccatggtggcatatgcctgtagtcccagctatttgggaggctgaggtgggaggattgcttgagcctgggaggtcaaggctgcagggagctgtgatggcaccactgcactccagagagagaccctgtgtcaaaaaagaa----agaaagaaggaaggaaaaT------GAAGGAAGGAAAAAAAAGGAAGGAAAGAAAGGAGAG-------------------AGAAAGAAAAGAGAGAGAAAGAAAACAGAAGAGAAAAG s panTro4.chr17 76222056 358 + 82630442 AAAGAACCAACAAggccaggtgcagtggctcatgcctgtaatcacagcactttggaaggccaaggtgggaggatcatttgagcccaggagttcaagaccagcctgggcaacatagggagactttgtctctaccaaaaaaatacaaaaaaatcagccgggcatggtggcatatgcctgtagtcccagctatttgggaggctgaggtgggaggattgcttgagcctgggaggtcaaggctgcagggagctgtgatggcaccactgcactccagagagagaccctgtgtcaaaaaagaa----agaaagaaggaaggaaaaT------gaaggaag------------------------------------------------gaaagaaaggagagagaaagaaaac--aagagaaaag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319511 385 + 73212453 AAAGAACCAACAAggccaggtgcagtggctcatgcctgtaatcacagcactttggaaggccaacgtgggaggatcacttgagcccaggagttcaagaccagcctgggcaacatagggagactttgtctctaccaaaaaaatacaaaaaaattagccgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggtgggaggattgcttgagcctgggaggtcaaggctgcagggagctgtgatggcaccactgcactccagagagagaccctgtgtcaaaaaagaa--agagaaagaaggaaggaaaat------aaaggaaggaaggaagggaaaaaaaaaagaaggaag--------------------gaaagaaaggagagagaaagaaaAC-----AGAAAAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644548 418 - 94967081 AAAGAACCAACAAggccaggtgcagtggctcatgcctgtaatcacagaactttggaaggccaaggcgggaggatcatttgagctcaggagttcaagaccagcctggacaacatagggagactttgtctctaccaaaaaaatacaaaaaaattagctgggcattgtggcatacacctgtagtcccagctatttgggaggctgaggcgggagggttgcttgagcctgggaggtcaaggctgcagggagctgtgatggcgccactgcactccagagagagaccctgtctcaaaaaagaaagagagaaagaagcaaggaaaATAAaaaggaaggaaggaaaaaaaagaaggaaaagaaaaagaaggaaggaaggaaagaaagagagaaagaaaagagagagaaagaaaacagaaaagaaaag i nomLeu3.chr14 C 0 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e calJac3.chr5 126508859 17476 + 159171411 T e chlSab2.chr16 30679150 16043 - 75148670 T e papAnu2.chr16 68625503 15457 + 74645514 T e macFas5.chr16 74618175 13174 + 80997621 T a score=11971.000000 s hg38.chr17_GL383566v1_alt 11608 13 + 90219 Aggctgggtgcag s panTro4.chr17 76222414 13 + 82630442 aggctgggtgcag i panTro4.chr17 C 0 T 16466 s ponAbe2.chr17 67319896 13 + 73212453 Aggctaggtgcag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644966 13 - 94967081 aggctgggcgcag i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74605001 13 + 80997621 Aggccaggcacgt i macFas5.chr16 T 13174 C 0 s papAnu2.chr16 68610046 13 + 74645514 AGGCCAGGCAcgt i papAnu2.chr16 T 15457 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e calJac3.chr5 126508859 17476 + 159171411 T e chlSab2.chr16 30679150 16043 - 75148670 T a score=4927.000000 s hg38.chr17_GL383566v1_alt 11621 7 + 90219 tggctca s panTro4.chr17 76205961 7 + 82630442 tggctca i panTro4.chr17 T 16466 C 0 s ponAbe2.chr17 67319909 7 + 73212453 tggctct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644979 7 - 94967081 tggctca i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74605014 5 + 80997621 tgact-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68610059 7 + 74645514 tgactca i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e rheMac3.chr16 74809249 13046 + 80904711 T e calJac3.chr5 126508859 17476 + 159171411 T e chlSab2.chr16 30679150 16043 - 75148670 T a score=700.000000 s hg38.chr17_GL383566v1_alt 11628 1 + 90219 t s panTro4.chr17 76205968 1 + 82630442 c i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319916 1 + 73212453 t i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644986 1 - 94967081 t i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74796203 1 + 80904711 t i rheMac3.chr16 T 13046 C 0 s macFas5.chr16 74605019 1 + 80997621 t i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68610066 1 + 74645514 c i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126508859 17476 + 159171411 T e chlSab2.chr16 30679150 16043 - 75148670 T a score=4683.000000 s hg38.chr17_GL383566v1_alt 11629 2 + 90219 gc s panTro4.chr17 76205969 2 + 82630442 ac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319917 2 + 73212453 gc i ponAbe2.chr17 C 0 T 16074 s nomLeu3.chr14 3644987 2 - 94967081 gc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74796204 2 + 80904711 gc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74605020 2 + 80997621 gc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68610067 2 + 74645514 gc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30663107 2 - 75148670 gc i chlSab2.chr16 T 16043 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126508859 17476 + 159171411 T a score=562974.000000 s hg38.chr17_GL383566v1_alt 11631 278 + 90219 ctgtaatcccagcactttgggaggctgatgcgggcggatcacctgaggtcaggagttcaagaccagcctggccaacgtggcgaaa-ccccatctgtactaaaaatacaaaaattagctaggcatggtggcaggc-----gcctataatcctagctactagggaggctgaggcag---aattgcttgaacccaggaggcagaggttgcagtgagccaagatcacaccactgcattccagcctgggtgaca-gagcaagactacgtctcaaaaaaaaaaaaaaaaaaaaa-- s panTro4.chr17 76205971 278 + 82630442 ctataatcccagcactttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccagcctggccaatgtggtgaaa-cctcatctctactaaaaatacaaaaattagcccagagtggtggtgggt-----gcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaaccctggaggtggaggttgcagtgagccaagattgcaccattgccttccagcctgggcaacaagaacgaaact-catctcaaaaaaaaaaaaaaaaaa----- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67303845 262 + 73212453 ctgtaatcccagcagtttgggaggccaaggcgggcggatcacctgaagtcaggagttcgagaccagcctggccaatgtggtgaaa-ccctatctctactaaaaatacaaaaattagcccggagtggtggtgggt-----gcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgagaggtggaggttgcagtgagccgcgattgtaccattgcactccagcctggg-----------------catctcaaaaaaaaaaaaaaaaaa----- i ponAbe2.chr17 T 16074 C 0 s nomLeu3.chr14 3644989 275 - 94967081 ccgtaatcccagcactttgggaggctgttgtgggcggatcacctgaggtcaggagttcaagaccagcctggccaacgtggcgaaa-ccctgtctgtactaaaaatacaaaaattagccaggcatggtggcaggc-----gcctataatcctagctactcgggaggctgaggcag---aatcgcttgaacccaggaggcagaggttgcagtgagccgagatcacaccactgcattccagcctgggtgaca-gagcaagactccgtcccaaaaaataataataataa----- i nomLeu3.chr14 C 0 T 16989 s rheMac3.chr16 74796206 287 + 80904711 ctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaggagttggagaccagcctggccaatgtggtgaaacccccatctctactaaaaatacaaaaagtagcccagagtggtggtgggtagctggcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaagccgggaggctgaggttgtggtgagccgaggttgcgccattgcactccaacctgggcggcaagaacgaaactccatctcaaaaaaaaaaaaaaaaaa---ag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74605022 287 + 80997621 ctgtaatcccagcactttgggaggccgaggcaggcggatcacctgaggtcaggagttggagaccagcctggccaatgtggtgaaacccccatctctactaaaaatacaaaaagtagcccagagtggtggtgggtagctggcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaagccgggaggctgaggttgtggtgagccgagtttgcgccattgcactccaacctgggcggcaagaacgaaactccatctcaaaaaaaaaaaaaaaaaa---aa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68610069 278 + 74645514 ctgtaatcccagcactttaggaggccgaggcgggctgatcacctgaggtcaggagtttgagaacagcctggccaatgtggtgaaa-ccccatctctactaaaaatacaaaaatcagcccagaGTGGTGGTGGGTAgctggcctgtagtcccagctactcgggaggctgaagcaggagaattgcttgaacccaggaggcagaggttgtggtgagccgaggttgcgccattgcactccaacctgggcggcaagaacgaaactccatctcaaaaaaaaaaag----------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30663109 287 - 75148670 ctgtaatcccagcactttaggaggccgaggcgggcgcatcacctgaggtcaggagtttgagaccagcctggccaatgtggtgaaacccccatctctactaaaactacaaaaattatcccagagtggtagtgggcagctggcctgtaatcccagctattcgggaggctgaggcaggagaattgcttgaagccgggaggctgaggttgtggtgagctgaggttgcgccattgcactccaacctgggcggcaagaacgaaactccatctcaaaaaaaaaaaaaaaaaa---aa i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126508859 17476 + 159171411 T a score=102468.000000 s hg38.chr17_GL383566v1_alt 11909 65 + 90219 agtaaagggcgctgataaagctatcagtgtgcagcagcttgggcctaccac----ccttcctgagctat s panTro4.chr17 76206249 64 + 82630442 -gtaaagggcgctgataaagctatcagtgtgcagcagcttgggcctaccac----ccttcctgagctat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67304107 65 + 73212453 aaaaaaaGGCGCTGATAAAGCTATCAGTGTGCAGCAGCTTGGGCCTGCCAC----CCTTCCCGAGCTGT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74796493 65 + 80904711 ----gttggcgctgataaagctatcagtgtgcagcagcttgggcctgccacctttccttcctgagctat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74605309 65 + 80997621 ----GTTGGCGCTGATAAAGCTATCAGTGTGCAGCAGCTTGGGCCTGCCACCTTTCCTTCCTGAGCTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68610347 62 + 74645514 -------ggccctGATAAAGCTATCAGTGTGCAGCAGCTTGGGCCTGCCACCTTTCCTTCCTGAGCTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30663396 62 - 75148670 -------ggcgctgataaagctatcagtgtgcagcagcttgggcctgccacctttccttcctgagctgt i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3645264 16989 - 94967081 T e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126508859 17476 + 159171411 T a score=3235628.000000 s hg38.chr17_GL383566v1_alt 11974 1427 + 90219 ccagcgactaggcttcaggtagtgtggtggagagtc---atgagacctggcggtgggctcagggtcctgcccatctgtacagccgaggctaatgagggcaagggggcagtgtgtattggctccgacaatgtattgatcacacgaaag-tttttgtttgttttgagacagggtcttgctctcgcccaggctgaagtgcagtagcctgatcgtggctcactgctatctcaacatcctaagctccagcaatcctccagctttagccacctgagtagctgggactacaggcatgcaccactgcacccagctaatttttgtatttttggtagagatcggatttcaccatgttgcccaagttggtctccaactcctgggcttaagcaatccacctgccttggcctcccagagtgttaggattacaggtgagccaccatgcctggcctgtttttgtttttgtttttgtttttttttttgAGACgatcttgctctgtcactcagactgtgcagtggcacaatcacggctctctacagcctccaacttgacctcctgggctccagtgatcctcctgcctcagctgcccaagtaggactgcaggcatgtgcaagtacactcagctaatttattttta-tttttgtagagatgaggtctggctgtgttgcctaggttggtctcaaactcctggccctaagcagtcctgccacgttgccatcccaaagtgctgggattacagatttgagccaccatgcttggccagcaaaattgtgttttaaaat------------------------gggaggagaatagagggaacatttgcaaatatctgttgttttagtggttatattaggggcagtattaaca-ttgttatgctgagtttttgtatggtaacaagtgagtaattaggggctgtcctcagccagctttcccc-aggtcctgtgttgaaggttgtctgtgtggaagatagatcagggagtggttaaatagaagccctgtagtcgccaggtgtggtggctcacgcctgtaatcccatcgctgggagaccagggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaggtgaaaccccatcgctactaaaaataaaaaaattaaccgggcatggtggtgcacgcctataatcccagctccttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgaggcgagattgtgccattgcactccagcttgggcaacaaagcaagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaagaagaagccctgtagtctcagatttgaattggaaggttaatatgaattcatgaggtatttttatctttaaatgtgtatgtgtggtgagtttaagtgaatttacttagaaacaatgagcagcccattacaaagagaatctctaacatcccgatt s panTro4.chr17 76206313 1410 + 82630442 ccagcgactaggcttcaggtagtgtggtggagagtc---atgagacctggcggtgggctcagggtcctgcccatctgtacagccgaggctaatgagggcaaggggacagtgtgtattggctccgacaacgtattgatcacacgaaag-tttttgtttgttttgagacaggatcttgctctcacccaggctgaagtgcagtagcctgatcgtggctcactgctatctcaacatcctaagctccagcaatcctccagctttagcctcctgagtagctgggactacaggcatgcaccactgcacccagctgatttttgtatttttggtagagatcagatttcaccatgttgcccaagttggtctccaactcctgggcttaagcaatccacctgccttggcctcccaaagtgttaggattacaggtgagccaccatgcctggccTGttttttttttttttttt--ttttttttttgagacgatcttgctctgtcactcagactgtgcagtggcacaatcacggctctctacagcctccaacttgacctcctgggctccagtgatcctcctgtctcagctgcccaagtaggactgcaggcatgtgcaagtacactcagctaatttattttta-tttttgtggagatgaggtctggctgtgttgcctaggttggtctcaaactcctggccctaagcagtcctgccacgttgccctcccaaagtgctgggattacagatttgagccaccatgcttggccagcaaaattgtgttttaaaat------------------------gggaggagaatagagggaacatttgcaaatatctgttgttttagtggttatattaggggcagtattaaca-ttgttatgctgagtttttgtatggtaacaagtgagtaattaggggctgtcctcagccagctttcccc-gggtcctgtgtcgaaggttctctgtgtggaagatacatcagggagtggttaaatagaagccctgtagtcgccaggtatggtggctcacgcctgtaatcccatcgctgggagaccagggtgggtggatcacctgacttcaggagttcgagaccagcctggccaggtgaaaccccatcgctactaaaaatacaaaaattaactgggcatggtggtgcacgcctataatcccagctccttgggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgaggcgagattgtgccattgcactccagcttgggcaacaaagcaagactccgtctcaaaaaaaaaaaaaaaa---------------gccctgtagtctcagatttgaattggaaggttaatatgaattcatgaggtatttttatctttaaatgtgtatgtgtggtgagtttaagtgaatttacttagaaacaatgagcagcccattacaaagagaatctctaacatcccgatt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67304172 1427 + 73212453 CCAGCAACTGGGCTTCAGGTAGTGTGGTGGAGAGCC---ATGAGACCTGGCGGTGGGCTTAGGGTCCTGCCCATCGGTACAGCCAAGGCTAATGAGGGCAAGGGGACAGTGTGTATTGGCTCCGACAATGTATTGATCACACAAAAGttttttgtttgttttgagacagggtcttgctcttgcccaggctggagtacagtagcctgatcgtggctcactgcgatctcaacatcctaagctccagcaatcctccagccttagcctcctgagtagctgggactacaggcaggcaccactacacccagctaatttttgtatttttggtagagatcggatttcaccacgttgcccaagttggtctccaatttctgggctcaagcaatccacctgccttggcctcccaaagtgttaggattacaggtgagccaccatgcctggccTGtttttgttt----------ttttttttttgagacggtcttcctctgttacccggactgtgcagtggcagaatcacggctctctacagcctccaactcgaccacctgggctccagtgatcatcctgcctcagctgcccaagtaggactgcaggcatgtgcaactacactcagctaatttattttta-tttttgtagagatgaggtctggctgtgttgcctaggttggtctcgaactcctgaccctaagcaatcctgccacgttggcctcgcaaagtgctgggattacagatttgagccaccacacttggccAGCAAAATTGTGttttaaaattttaattttaaaattttaattttaaaaaGGAGAATAGAGGGAACATTTGCAAACATCTGTTGTTTTAGTGGTTATATTAGCGGCAGTATTAACATTTGTTATGCTGAGTTTTTGTATGGTAACAAGTGAGTAATTCGGGGCTGTCCTCAGCCAGCTTTCCCT-GGGTCCTGTGTGGAAGGTTCTCTGTGTGGGAGATACATCAGGGAGTGGTTAAGTAGAAGCCCTGTAGTCgccgggtgtggtggctcacacctgtaatcccattgctgggagaccagggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaggtgaaaccccatcgctactaaaaatacaaaaattaaccgggcatggtggtgcacgcctataatcccagctactcggaaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgaggcgagattgcgccattgcactccagcctgggcaacaaagcaagactccgtctcaaaaaaaaaaagaaa----------------GCTCTGTAGTCTCAGATTTGAATTGGAAGGTTAATATGAATTCATGAGGTATTTTTATCTTTAAATGTATATGTGTGCTGTATTTAAGTGAATTTActtagaaacaatgaccagcccattacaaagagaatctctaacatcccgatt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3628275 1395 - 94967081 CCAGCGACTGGAC-TCAGGTAGTGTGGTGGAGAGCC---ATGAGACCTGGCGGTGGGCTCAGGGTCCTGCTCATCTGTACAGCCAAGGCTAACGAGGGCAAGGGGACTGTGTGTATTGGCTCCAACAATGTATTGATCACACAAAAG-tttttgtttgttttgagacagggtcttgctcttgcgcaggctggagtgcagtagcctgatggtggctcactgtgatctcaacatcctaagctccagcaatcctccagccttagcctcctgagtagctgggactacaggcatgcaccactgcacccagctaatttctgtatttttggtagagatcagatttcaccatattgcccaagttggtctccaactcctgggctcaagcaatccacctgccttggcctcccaaagtgttaggattataggtgagccaccatgcctggccTGttgttttttttttttt---ttttttttttgcgactgtcttgctctgtcacccagactgtgcagtggcacaatcacggctctctacagcctccaactcgacctcctgggctccagtgatcttcctgcctcagctgcccaagcaggactgcaggcatgtgcaactacactcagctaatttattttta-tttttgtagagatgaggtctggctgtgttgcctaggttggtctccaactcctggccctaagcaatcctgccacattggcctcccaaagtgctgggattacagatttgagccaccacgcttggccAGCAAAATGGTGTTTTaaaat------------------------gggaggagaatagagggaacatttgcaaacatctgttgttttagtggttatattagcggcagtattaaca-ttgttgtgctgagtttttgtgtggtaacaagtgagtaattaggggctgtcctcagccagctttccct-gggtcctgtgttgaaggttcgctgtgtggaagatacatcagggagtggttaa-----------gtagtcgccgggtgtggtggcttatgcctgtaatcccatcactgggagaccagggtaggcggagcacctgaggtcaggatttcgagactagcctggccaggggagaccccatcgctactaaaaatacaaaaattaaccgggcctggtggtgcacacctataatcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgaggcgagattgcaccattgcactccagcctgggcaacaaagcaagactccgtctcagaaaaaaaaagaa-----------------gccctgtagtctcagatttgaattggaagattaatatgaattcatgaggtatttttatctttaaatgtgtatgtgtgttgtgtttaagtgaatttacttagaaacaatgatcagcccattacaaagagaatctctgacatcccgatt i nomLeu3.chr14 T 16989 C 0 s rheMac3.chr16 74796558 1410 + 80904711 ccagcaactgggcttcgggtagtgtcggggagagccatgatgagatctggcagcgggctcagggtcctgctcatctgtgcagccaagactaatgagggcaaggggacagtgtgtagtggctccaacaatgtattgatcacacaaaag-tttttgtttgttttgagacagggtcttgctctcgcccaggctggagtgccgtagaccaatcatggctcactgtgatctcaacatcctaagctccagcaatcctccagccttagcctcctgagtaactgggactacaggcatgcaccactgcacccagctgattattgtatttttggtagagaggggatttcaccatgttgcccaagttgatctcgaactcct-ggctcaagcaatccacctgccttggcctcccaaagtgttaggattacaggtgagccacaatgcctggccGGttttttttttttttttt--tcttttttttgagacggtcttgctctgtcacccagactgtgcagtggcacaatcacggctctctacagcttccaactcaacctcctgggctcccatgatccttctgcctcagctgcccaagtaggactgcaagcatgtgcaactacactcagctaatttattttta-tttttgtagagatgaggtcttgctgtgttgcctaggttggtctcgaactcttggccttaagcaatcctgccacgttggcctcccaaagtgctgggattacagatttgagccaccacacttggcccgggaaattgtgttttaaagt------------------------gggaggagaatagggggaacatttgcaaacatctgtcgttttagtggttatattagtggcaacattaaca-ttgttatgctgagtttttgtatggtaacaagtgagtaattaggggctgtcctcagccagctttccccggggtcctgtgttgaaggttctctgtgtggaagatacagcagggagcagttaagtagaagccctatagtcgcc-tacgcagtggctcacgcctgtaatcccatagacgggaggccaaggtgggcggatcacctgaggtcaggagttcaagaccagcctggccaggtgaaaccccatctctactaaaaatacaaaaattaactgggcatggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcggaggtttctgtgagctgagattgtgccattgcacttcagcctgggcaacaaagcaagactccgtctcaaaaaaataaataaataaaaagaa-------gccctgtaatctcagatttgaattggaaggttaatatgaactc---aggtatttttatctttaaatgtgtgtgggcg-tgtatttaagtgaatttacttagaaaca------agcccattacaaagagaatctctagcatccagatt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74605374 1408 + 80997621 CCAGCAACTGGGCTTCGGGTAGTGTCGGGGAGAGCCATGATGAGATCTGGCGGCGGGCTCAGGGTCCTGCTCATCTGTGCAGCCAAGACTAATGAGGGCAAGGGGACAGTGTGTAGTGGCTCCAACAATGTATTGATCACACAAAAG-tttttgtttgttttgagacagggtcttgctctcgcccaggctggagtgccgtagaccaatcatggctcactgtgatctcaacatcctaagctccagcaatcctccagccttagcctcctgagtaactgggactacaggcatgcaccactgcacccagctgattattgtatttttggtagagaggggatttcaccatgttgcccaagttgatctcgaactcct-ggctcaagcaatccacctgccttggcctcccaaagtgttaggattacaggtgagccacaatgcctggccGG--ttttttttttttttt--tcttttttttgagacggtcttgctctgtcacccagactgtgcagtggcacaatcacggctctctacagcttccaactcaacctcctgggctcccatgatccttctgcctcagctgcccaagtaggactgcaagcatgtgcaactacactcagctaatttattttta-tttttgtagagatgaggtcttgctgtgttgcgtaggttggtctcgaactcttggccttaagcaatcctgccacgttggcctcccaaagtgctgggattacagatttgagccaccacacttggccCGGGAAATTGTGTTTTaaagt------------------------gggaggagaatagggggaacatttgcaaacatctgttgttttagtggttatattagtggcaacattaaca-ttgttatgctgagtttttgtatggtaacaagtgagtaattaggggctgtcctcagccagctttccccggggtcctgtgttgaaggttctctgtgtggaagatacagcagggagcagttaagtagaagccctatagtcgcc-tacgcagtggctcacgcctgtaatcccatagccgggaggccaaggtgggcggatcacctgaggtcaggagttcaagaccagcctggccaggtgaaaccccatctctactaaaaatacaaaaattaactgggcatggtggtgcacgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcggaggtttctgtgagctgagattgtgccattgcacttcagcctgggcaacaaagcaagactccgtctcaaaaaaataaataaataaaaagaa-------gccctgtaatctcagatttgaattggaaggttaatatgaactc---aggtatttttatctttaaatgtgtgtgggcg-tgtatttaagtgaatttacttagaaaca------agcccattacaaagagaatctctagcatccagatt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68610409 1393 + 74645514 CCAGCAACTGGGCTTCGGGTAGTGTCGGGGAGAGCCATGATGAGATCTGGCGGCGGGCTCAGGGTCCTGCTCATCTGTGCAGCCAAGACTAATGAGGGCAAGGGGACAGTGTGTAGTGGCTCCAACAATGTATTGATCAcacaaaag-tttttgtttgttttgagacagggtcttgctctcgcccaggctggagtgctgtagaccaatcatggctcactgtgatCTCAACATCCTaagctccagcaatcctccagccttagcctcctgagtaactgggactacaggcatgcaccactgcacccaggtgattattgtatttttggtaaagaggggatttcaccatgttgcccaggttgatctcgaactcct-ggctcaagcaatccacctgccttggcctcccaaagtgttaggattacaggtgagccacaatgcctggcctg-----------ttttgt--ttttttttttgagacggtcttgctctgtcacccacactgtgcagtggcacaatctcggctctctacAGCTTCCaactcgacctcctgggctcctgtgatccttctgcctcagctgcccaagtaggactgcaggcatgtgcaactacactcagc-----tattttta-tttttgtagagatgaagtcttgctgtgttgcctaggttggtctcgaactcctgaccttaagcaatcctgccac---ggcctcccaaagtgctgggattacagatttgagccaccatacttggcctgcaaaattgtgttttaaaat------------------------gggaGGAGAATAGGGGGAACATTTGCAAACATCTGTTGTTTTAGTGGTTATATTAGCGGCAGCATTAACA-TTGTTATGCTGAGTTTTTGTATGGTAACAAGTGAGTGAGTAGGGGCTGTCCTCAGCCAGCTTTCCCCAGGGTCCTGTGTTGAAGGTTCTCTGTGTGGAAGATACAGCAGGGAGCAGTTAAGTAGAAGCCCTATAGTCGCC-tacgcagtggcttacgcctgtaatcccatagccgggaggccaaggtgggcggatcacctgaggtcaggagttcaagaccagcctggccaggtgaaaccccatccctactaaaaatacaaaaattaactgggcatggtggtgcacgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggtttctgtgagctgagattgtgccattgcacttcagcctgggcaacaaagcaagactccgtctcaaaaaaataaataaa-------aa-------gccctGTAGTCTCAGATTTGAATTGGAAGGTTAATATGAACTCATGaggtatttttatctttaaatgtgTGTGGGCG-TGTATTTAAGTGAATTTACTTAGAAACAATGACCAGCCCATTACAAAGAGAATCTCTAGCATCCAGATT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30663458 1413 - 75148670 ccagcaactgggcttcaggtagtgtcggggagagccatgatgagatctggcggcgggctcagggtcctgctcatctgtgcagccaagactaatgagggcaaggggacagtgtgtagtggctccaacaatgtattgatcacacaaaag-tttttgtttgttttgagacagggtcttgctctcgctcaggctggagtgccgtagaccaatcatggctcactgtgatctcaacatcctaagctccagcaatcctccagccttagcctcctgagtaactgggactacaggcatgcaccactgcacccagctgattattgtatttttggtagagaggggatttcaccatgttgcccaagttgatctcgaactcct-gggtcaagcaatccacctgccttggcctcccaaagtgttaggattacaggtgagccacaatgcctggccGG------ttttttttttt--ttttttttttgagacggtcttgctctgtcacccagactgtgcagtggcacagtcacggctctctacagcttccaactcgacctcctgggctcccatgatccttctgcctcagctgcccaagtgggactgcaggcatgtgcaactacactcagctaatttatttttattttttgtagagatgaagtcttgctgtgttgcctaggttggtctcgaactcctggccttaagcaatcctgccacgttggcctcccaaagtgctgggattacagatttgagccaccacacttggcccgcaaaattgtgttttaaaat------------------------gggaggagaat-gggggaacatttgcaaacatctgttgttttagtggttatattagcagcagtattaaca-ttgttatgctgagtttttgtatggtaacgagtgagtaattaggggctgtcctcagccagcttttcccagggtcctgtgttgaaggttctctgtgtggaagatacagcagggagcagttaagtagaagtcttgtagtcgcc-tgcgcagtggctcacgcctgtaatcccatcgctgggaggccaaggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggtgcacgcctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggtttctgtgagctgagattgtgccattgcacttcagcctgggcaacaaagcaagactccgtctcaaaaaaataaataaataaaaagaa-------gccctgtagtttcagatttgaattggaaggttaatatgaactcatgaggtatttttatctttaaatgtgtatgggcg-tgtatttaagtgaatttacttagaaacaatgaccagcccgttacaaagagaatctctagcatccagatt i chlSab2.chr16 C 0 I 40 e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126508859 17476 + 159171411 T a score=18333.000000 s hg38.chr17_GL383566v1_alt 13401 9 + 90219 gaacccagg s panTro4.chr17 76207723 9 + 82630442 gaacccagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67305599 9 + 73212453 gaacccagg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3629670 9 - 94967081 gaacccagg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74797968 9 + 80904711 gaacccagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74606782 9 + 80997621 gaacccagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68611802 9 + 74645514 GAACCCAGG i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126508859 17476 + 159171411 T e chlSab2.chr16 30664871 40 - 75148670 I a score=908861.000000 s hg38.chr17_GL383566v1_alt 13410 383 + 90219 cgttcctgttaaaatgactcattccaagtctgggacaggaaatgggccagatgagcctgggacgtcttgtcatatatcacttgggaaaaaagcgatcaaagactattagggggtgggcacagtggctcatggaggcaaacgtggcagattgcttgagcccagaagttcgagaccagcctggcccacatggtgaaactctgtctctactaaaaatacaaaattagccaggcgtggtggcaggcacctgtaatcccagctacatgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagagagaccatctcgaaaaataaaaaata-----------------g s panTro4.chr17 76207732 392 + 82630442 cgttcctgttaaaatgactcattccaagtctgggacaggaaatggaccagatgagcctgggacgtcttgtcatatatcacttgggaaaaaagcgatcaaagactattagggggtgggcacagtggctcacggaggcaaacgtggcagattgcttgagcccagaagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaattagccaggcgtggtggcaggcacctgtaatcccagctacatgggaggctgaggcaggagaatcacttgaacctggaaggtggaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagtgagaccatctcgaaaaataaaaaataaaa--------aaaatag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67305608 400 + 73212453 cgttcctgttaaaatgactcattccaagtctgggacaggaaacgtaccagatgagcctgggacgtcttgtcatatatcacttgggaaaaaagcgatcaaagactattagggggtgggcgcagtggctcacggaggcaaacatggcagattgcttgagcccagaagttcgaaaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaattagccaggcgtagtggcaggcacctgtaatcccagctacgtgggaggctgaggcaggagaatcacttgaacccggaaggtggaggttgcattgagccgagattgtgccactgcactccagcctgagtgacagagtgagaccatctcaaaaaataaaaaataaaaaaaatagtaaaatag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3629679 392 - 94967081 cgttcctgttaaaatgactcattccaagtctgggacgggaaatgtaccagatgagcctgggacatcttgtcatgtatcacttgggaaaaaagggatcaaagactattagggggtgagcgcagtggctcacagaggcaaatgtggcagattgcttgagctcagaagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacagaattagccaggcgtggtggcacacgcctgcggtcccagctacttgggaggctgaggcaagagaatcacttgaacccggaaggtggaggttgcagtgagccgagattgtgccactgcactccagcctgggcaacagagcgagaacatctcaaaaaataaaaaatgaaa--------aagaaag i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74797977 392 + 80904711 cgttcctgttaaaatggctcattccaggtctgggacaggaaatgtaccacatgagcctgggacgtcttgtcatatatcagttgggaaagaagcgatcaaagactatcagagggtgggcacagtggcttacggaggcaaacgtagcagattgcttgagcccggaagttcgagaccagcctggccaacacgttgaaaccctgtctccactaaaaatataaaattagccaggcatggtggcgggcacctgtaatcccagctacacgggaggctgaggcagaagaatcacttgaacctgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggtgaaagagtgagaccatctcaaaaaataaaaaataaaa--------aaaatag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74606791 392 + 80997621 cgttcctgttaaaatggctcattccaggtctgggacaggaaatgtaccagatgagcctgggacgtcttgtcatatatcagttgggaaagaagcgatcaaagactatcagagggtgggcacagtggcttacagaggcaaacgtagcagattgcttgagcccggaagttcgagaccagcctggccaacacgttgaaaccctgtctccactaaaaatataaaattagccaggcatggtggcgggcacctgtaatcccagctacacgggaggctgaggcagaagaatcacttgaacctgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggtgaaagagtgagaccatctcaaaaaataaaaaataaaa--------aaaatag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68611811 386 + 74645514 CGAACCTGTTAAAATGGCTCATTCCAGGTCTGGGACAGGAAATGTACCAGATGAGCCTGGGACGTCTTGTCATATATCAGTTGGGAAAGAAGCGATCAAAGACTATCagagggtgggcacagtggcttacggaGGCAAAtgtggcagattgcttgagcctggaagttcgagaccagcctggccaacacgttgaaaccctgtctctactaaaaatacaaaattagccaggcatggtggcgggcacctgtaatcccagcgacacgggaggctgaggcagaagaatcacttgaacccgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggtgaaagagtgagaccatctcaaaaaata------aaaa--------aaaatag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30664911 385 - 75148670 cgaacctgttaaaatggctcattccaggtctgggataggaaatgtaccagataagcctgggatgtcttgtcatatatcagttgggaaagaagcgatcaaagactatcagagggtgggcacagtggcttacggaggcaaacgtggcagattgcttgagcccggaagttcgagaccagcctggccaacacgttgaaaccctgtctctactaaaaacacaaaattagccaggcatggtggcgggcacctgtaatcccagcgacacagaaggctgaggcagaagaatcacttgaacccgggaggtagaggttgcagtgagctgagattgtgccactgcactccagcctgggtgaaagagtgagaccatctcaaaaaat-------aaaa--------aaaatag i chlSab2.chr16 I 40 C 0 e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126508859 17476 + 159171411 T a score=3211204.000000 s hg38.chr17_GL383566v1_alt 13793 1169 + 90219 ggtcatgtcaaaaggactcagcagactcaaagaggccttcactggccagaaacgagacaagttcaacttgtcccaattattattgtcctataataataattgcaggacgccattgaatgttaagattcatgagttcataattttaatatataacataattttggatgatagggaaccatttattttgaaaactggtaaataagaagcaagcatttatcccagcctttcctaaatgcacgatagatgaagatgagtatctataaaagtatttcaactttcactaactataaaaatgatagaataacatcattctgtaatcctgatgaataaatagatagaaatattaagcatcagctgctaacatcacacacacaaaagacaagcagatgtcctgtgtctcctagagatctacagtcttgccagagttttgttatccagac-tgaatagatccagtctctgaatccagctgccaatttgcaagaa--atagagaccaaggaacctgttgaactgtactgtgggaaactgaagtcagAAGGCTCAGGCtctttatc--------------ttttttttgttgttgttgagatggaatcttgctctgtcgcccaggctggagtgcagtggtgcgatctcggcttactgcaacctctgcctcctgagttgaagtgattctcctgcctcagccttctgagtagctgggactacaggcatacgccaccatgtccagctatttttt-gtgtggttttggtaaagacggaccttcactatgttggccaggctggtctcgaacccctgacctcaaatgatgcgcccgcgtcggcctcccaaagtgttgggattacaggcgtgaaccaccccgcccgAACAGAAGGCTCAGTCTCTTTAATTTGTAGGAAATGTCCCACCCAATTCCTTTCTTTTTCTTGGAGCAGATCTATTGTAAGTTTTAAAACACGAGGAAGCGATCATCACAGCAG--CCGGAAAGCGGCTCCTCCCTGGGCAGAGGCTGTGGTGTGGTGTGGGGTCGGGGCAGTCCTGGCTCCTGGGGTCCTCTGTGC-GCTTGTGTGCATTTCCGTG---------------TTTACTTTACAATAAAAAGGTTTATTATTGTTTGGTTGT---TTTTTGTTTTTGGTTAATGGCTTTAGACAGGTTAGCTTGCC-TTGAAGAAAAGTTAACACTGGTTA-----TT s panTro4.chr17 76208124 1169 + 82630442 ggtcatgtcaaaaggactcagcagactcaaagaggccttcactggccagaaacgagacaagttctacttgtcccaattgttattgtcctataataataatgncaggacgccattgaatgttaagattcatgagttcataattttaatatataacataattttggatgatagggaaccatttattttgaaaactggtaaataagaagcaagcatttatcccagcctttcctaaatgcacgctagatgaagatgagtatctataaaagtatttcaactttcactaactataaaaatgatagaataacatcattctgtaatcctgatgaatagataaatagaagtattaagcatcagctgctaacatcacacacacaaaagacaagcagatgtcctgtgtctcctagagatctacagtcttgccagagttttgttatccagac-tgagtagatccagtctctgaatccagctgccaatttgcaagaa--atagagaccaaggaacctgttgaactgtactgtgggaaactgaagtcagaaggctcaggctCtttatc--------------ttttttttgttgttgttgagatggaatcttgctctgtcgcccaggctggagtgcagtggtgcaatctcggcttactgcaacctctgcctcctgggttgaagtgattctcctgcctcagccttctgagtagctgggactacaggcatacgccaccatgtccagctatttttt-gtgtggttttggtaaagacagaccttcaatatattggccaggctggtctcgaacccctgacctcaaatgatgcacccgcgtcggcctcccaaagtgttgggattacaggcgtgaaccaccccgcccgaccAGAAGGCTCAGTCTCTTTAATTTGTAGGAAATGTCCCACCCAATTCCTTTCTTTTTCTTAGAGCAGATCTATTGTAAGTTTTAAAACACGAGGAAGCGATCATCACAGCAG--CCGGAAAGCGGCTCCTCCCTGGGCAGAGGCTGTGGTGTGGTGTGGGGTCGGGGCAGTCCTGGCTCCTGGGGTCCTCTGTGC-GCTTGTGTGCATTTCCGTG---------------TTTACTTTACAATAAAAAGGTTTATTATTGTTTGGTTGT---GTTTTGTTTTTGGTTAACGGCTTTAGACAGGTTAGCTTGCC-TTGAAGCAAAGTTAACACTGGTTA-----TT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67306008 1175 + 73212453 ggtcatgtcaaaaggactcagcagactcaaagaggccttcactggccagaaatgagatgagttcaacttgtcccaattattgttgtcctataataataattgcaggatgccattgaatgttaagattcatgagttcataattttaatatataatgtaattttggaagatagggaaccaattattttgaaaactggtaaataagaagcaagcatttatcccagcctttcctaaatgcacaatagatgaagattagtatctataaaagtattccaactttcactaactataaaaatgatagaataacatcattctgtaatcctgatgaataaatagatataagtattaagcatcagctgctaagatcacacacacagaagacaagcagatgtcctgtgtctcctagagatctacagtcttgccagagttttgttattcaaac-tgagtagatccagtctctgaatacagctgccaatttgcaagaa--atagagaccaaggaacctgttgcactgcactgtgggaaactgaagtcagaaggctcaggctCTTTAtcttta---tcttttttttttttttttttttttgagatggaatctcactctgtcacccaggctggaatgcagtggtgcaatctcagctcactgcaacctccgcctcctgggttgaagtgattctcctacctcagccttccgagtagctgggattacaggcatacgccaccatgtccagctatttttt-gtgtgtttttagtaaagatggagcttccctatattggccaggctggtctcgaacccctgacctcaaatgatgtgcccgcctcggcctaccaaagtgttgggattacaggcgtgaaccaccctgcccgaccAGAAGGCTCAGTCTCTTTAATTTGTAGGAAATGTCCCACCCAATTCCTTTCTTTTTCTTACAGCAGATCTATTGTAAGTTTTAAAACACGAGGAAGCGATCATCACAGCAG--CCAGAAGGTGGCTTCTCCCTGGGCAGAGGCTGTAATGTGGTGTGGGGTCAGGGCAGTCCTGGCTCCTGGGGTCCTCTGTGC-GCT--TGCGCATTTC--TG---------------TTTATTTTACAATAAAAAGGTTTGTTATTGTTTGGTTGT---TTTTTGTTTTTGGTTAACGGCTTTAGACAGGTTAGCTTGCC-TTGAAGAAAAG-TAACACTGGTTA-----TT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3630071 1158 - 94967081 gatcatgtcaaaaggactcagcagtctcaaagaggccttcactggcgagaaacgagatgagttcaacttgtcccaattattattgtcctataataataattgcaggatgcaattgaatgttaagattcatgag-tcataattttaatatataacgtaattttcgatgatagggaagcaattattttggaaactggtaaataagaagcaagcatttatcccagcctttcctagatgcaccatagatgaagattagtatctataaaagtattccaactttc----actatcaaaatgatagaataa---cattctgtaatcctgatgaataaatagatacaagtatgaagcatcaggtgctaagatcacacacacaaaagacaagcagatgtcctgtgtctgctggagatctacagtcttgcc--agttttgtaatccaaac-tgagtagatccagtctctaaatccagctgccaatttgcaagaa--atagagaccaaggaacctgttgaactgcactgtgggaaactgaagtcagaaggctcaggctCtttatc-----------tgttttttttttttttttttgagatggaatctcgctctgtcacccaggctggagtgcagtgacgcgatctcggctcactgcaacctccgcctcctgggttgaagtgattctcctgcctcagccttctaagtcgctgggactacaggcacccgccaccatgtccagctattttgt-gtgtgtttttagtaaagacggagcttcactatattggccaggctggtctcgaacccctgacctcaaatgatgcacccgcctcggcctcccaaagtgttgggattacaggcgtgaaccaccccgcccgaccAGAAGGCTCGGTCTCTTTAATTTGTAGGAAACGTCCCACCCAATTCCTTTCTTTTTCTTACAGCAGATCTACTGTAAGTTTTAAAACACGAGGAAGCGATCATCACAGCAG--CCGGAAAGCGGCTCCTCGCTGGGCAGAGGCTGTGGCGTGGTGTGGGGTCGGGGCAGTCCTGGCTCCTGGGGTCCTCTGTGC-ACT--TGCGCATTTC--TG---------------TTTATTTTACAATAAAAAGGTTTGTTATTGTTTGGTTGT---TTTTTGTTTTTGGTTAACAGCTTTAAACAGGTTAGCTTGCT-TTGAAGAAAAG-TAACACTGGTTAT----TT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74798369 1192 + 80904711 gttcatgtcaaaaggactcagcagactcaaagaggctttcactggccagcaacgagacaagttcaacttgtcccaattattattgtcctataataataattgcaggacgccattgaatgttaagattcatgagttcataattttaatatataatgtaattctgaatgatagggaaccaattattttgaaaactggtaaataagaagcaagcatttatcccagcctttcctaaatgcacaatagatgaagattagtatctatgaaagtattccaactttcactaactatagaaatgatagaataacatcattctgtaatcccgatgaataaatagatacaggtattaagcatcagctgctaagatcacacacacaaaagacaagcagatgtcctgtgtctcctagagatctacagtcttgctagagttttgttatccaaccttgggtagatccagtctgtgaatccagctgccaatttgcaagaa--atagagaccaaggaacccattgaactgcactgtgggaaactgaagtcagAAGGCTCGGGCTTTTTAtcttta----tttttttttttttttttttttttgagatgaaatctgactctgttgtccaggctggagtgcaatggtgcgatctcggctcactgcaacttctgccttctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcatatgccaccacgtccagctatttttt--tgtgtttttagtaaaggcagggcttcaccgtattggccaggcttgtctcgcacccctg-----agatgatccacccgccttggcttcccaaagtgttggtattacaggcgtgaaccaccctgcctggccAGAAAGCT--GTGTCTTTAATTTATAGGAAATGTCCCACCCAATTCCTTTCTTTTCCTTACAGCAGATCTATTGTAAGTTTTAAAACGCGAGGAAGTGATCATCACAGCAG--CCAGAAGGCGGCTCCTCCCTGGGCAGAGGCTGT-GTGTGGTGTGGGGTCTGGGCAGCCCGGGCTCCTGGGGTCCTCTGTGCAGCT--TGTGCATTTCTGTGTTTTATATTCTGTGTTTTATTTTACAATAAAAAGGtttgttattctttgtttttttgtttttgtttttggttAACGGCTTTAGACAGGTTAGCTTGTC-TTGAAGAAAAG-TAACACTGGTTATTTACTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74607183 1189 + 80997621 gttcatgtcaaaaggactcagcagactcaaagaggctttcactggccagcaacgagacgagttcaacttgtcccaattattattgtcctataataataattgcaggacgccattgaatgttaagattcatgagttcataattttaatatataatgtaattctgagtgatagggaaccaattattttgaaaactggtaaataagaagcaagcatttatcccagcctttcctaaatgcacaatagatgaagattagtatctatgaaagtattccaactttcactaactatagaaatgatagaataacatcattctgtaatcccgatgaataaacagatacaggtattaagcatcagctgctaagatcacacacacaaaagacaagcagatgtcctgtgtctcctagagatctacagtcttgctagagttttgttatccaaccttgggtagatccagtctgtgaatccagctgccaatttgcaagaa--atagagaccaaggaacccattgaactgcactgtgggaaactgaagtcagAAGGCTCGGGCTTtttatcttta-------tcttttttttttttttttttgagatgaaatctgactctgttgtccaggctggagtgcaatggtgcgatctcggctcactgcaacttctgccttctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcatatgccaccatgtccagctatttttt--tgtgtttttagtaaaggcagggcttcaccgtattggccaggcttgtctcgaacccctg-----agatgatccacccgcctcggcttcccaaagtgttggtattacaggcgtgaaccaccctgcctggccAGAAAGCT--GTGTCTTTAATTTATAGGAAATGTCCCACCCAATTCCTTTCTTTTCCTTACAGCAGATCTATTGTAAGTTTTAAAACGCGAGGAAGTGATCATCACAGCAG--CCAGAAGGCGGCTCCTCCCTGGGCAGAGGCTGT-GTGTGGTGTGGGGTCTGGGCAGCCCGGGCTCCTGGGGTCCTCTGTGCAGCT--TGTGCATTTCTGTGTTTTATATTCTGTGTTTTATTTTACAATAAAAAGgtttgttattctttgtttttttgtttttgtttttggttAACGGCTTTAGACAGGTTAGCTTGTC-TTGAAGAAAAG-TAACACTGGTTATTTACTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68612197 1194 + 74645514 gttcaTGTCAAAAGAACTCAGCAGACACAAAGAGGCTTTCACTGGCCAGAAACGAGACGAGTTCAACTTGTCCCAATTATTATTGTCCTATAATAATAATTGCAGGACGCCATTGAATGTTAAGATTCATGagttcataattttaatatataatgtaattctGAATGATAGGGaaccaattattttgaaaactggtaaataaGAAGCAAGCATTTATCCCAGCCTTTCCTAAATGCACAATAGATGAAGATTAGTGTCTATGAAAGTATTCCAACTTTCACTAACTATAGAAATGATAGAACAACATCATTCCGTAATCCCGATGAATAAATAGATACAGGTATTAAGCATCAGCTGCTAagatcacacacacaaaagacaagcAGATGTCCTGTGTCTCCTAGAGATCTACAGTCTTGCTAGAGTTTTGTTATCCAACCTTGGGTAGATCCAGTCTGTGAATCCAGCTGCCAATTTGCAAGAA--ATAGAGACCAAGGAACCCATTGAACTGCACTGTGGGAAACTGAAGTCAGAAGGCTCGGgctttttatctttatc-ttttttttttttttttttttttttgagatgaaatctgactctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaacttccaccttctgggttcaagcaattcttctgcctcagcctcctgagtagctgggactacaggcatgtgccaccacgtccagatatttttttgtgtgtttttagtaaagacggggcttcaccatattgaccaggcttgtctcgaacccctg-----agatgatccacccgcttcggcttcccaaagtgttgggattacaggcgtgaaccaccctgCCCGGCCAGAAGGC----TGTCTTTAATTTGTAGGAAATGTCCCACccaattcctttcttttccttacaGCAGATCTATTGTAAGTTTTAAAACGCGAGGAAGTGATCATCACAGCAG--CCAGAAGGCGGCTCC-CCCTGGGCAGAGGCTGT-GCGTGGTGTGGGGTCTGGGCAGCCCGGGCTCCTGGGGTCCTCTGTGCAGCT--TGTGcatttctgtgttttatattctgtgttttattttacaataaaaaagtttgttattctttgttcttttgtttttgtttttggttaacGGCTTTAGACAGGTGAGCTTGTC-TTGAAGAAAAG-TAACACTGGTTATTTACTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30665296 1197 - 75148670 gttcatgtcaaaagaactcagtagactcaaagaggctttcactggccagaaacgagatgagttcaacttgtcccaattattattgtcctataataataattgcaggacgccattgaatgttaagattcatgagttcataattttaatatataatgtaattctggatgatagggaaccaattattttgaaaactggtaaataagaagcaagcatttatcccagcctttcctaaatgcacaatagatgaagattagtatctatgaaagtattccaactttcactaactatagaaatgatagaataacatcattccgtaatcccgatgaataaatagatacaggtattaagcatcagctgctaagatcatacacacaaaagacaagcagatgtcctgtgtctcctagagatctacagtcttgctagagttttgttatccaaccttggatagatccagtctgtgaatccagctgccaatttgcaagaa--atagagaccaaggaacctgttgaactgcactgtgggaaACCGAAGTCAGAAGGCTCGGGCTTTTTATCTttatcttttttttttttttttttttttttcgagatgaactctgactctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaacttccaccttctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcatgtgccaccacgtccagatatttttttgtgtgtttttagtaaagacggggcttcaccatattggccaggcttgtctcgaacccctg-----agatgatccacccacctcggcttcccaaagtgttgggattacaggcatgaaccaccctgcccagccAGAAGACT--GTGTCTTTAATTTGTAGGAAATGTCCCACCCAATTCCTTTCTTTTCCTTACGGCAGATCTATTGTAAGTTTTAAAACGCGAGGAAGTGATCATCACAGCAG--CCAGAAGGCAGCTCC-CCCTGGGCAGAGGCTGT-GCGTGGTGTGGGGTCTGGGCAGCCCGGGCTCCTGGGGTCCTCTGTGCAGCT--TGTGCATTTCTGTGTTTTATATTCTGTGTTTTATTTTACAATAAAAAGAtttgttattctttgtttttttgtttttgtttttggttAACGGCTTTAGACAGGTTAGCTTGTC-TTGAAGAAAAG-TAACACTGGTTATTTACTT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126491383 1134 + 159171411 GGTCATGTCAAAAGG-------AAACTCACAGAGGC-TTCACTGGCCAGGAACAGGACGAGGTCACCTTGTCCCAATTATTATTGTCTCATAATAATAATCGCAGGATGCCATTGAA--ttaagattcatgagtttataactttaatatataac--aattttggatgatagggaaccagttactttgaaaactggcaaat---aagcaagcatttatcctgacctttcccaaatgcatagtatatgaagattagtacctatgaagttattccaacttctagtgactgtaaaactgttagaataacatcgttctgcaatcccgatgaataaatagacataggtattaagcatcagctgctaagatcacacacacaaaaagatgccagatgccctgtgtctcttagagatctacagtcttgccagagttttacgatccaacc-tgagtagatccagtctctgaatccaggtgccaattggcaagaagtacagaggccaaggaaactgttggactgcattatgggaaactgaagtcagAAGGCTCAGGCCCTTTATC-----------------------Atttttttgagatgaagtct---cctgtcgcccaggctggaatgccgtggtgcgatctcggctcactgcaacctccacctcctgggttcaagcgattctcctgcctgggcctccctagtagctgtgactacaggcatgtgccaccatgtccggctaattttt-----atttttagtagagaaggggcttcactgtgttggccaggctggtcttgaacccctgatctaaaacgatccatccacctcagcctccccaagtgttgggattacaagcatgagccaccacacctagccAGAAAGTTCAGTCTC--TAATTTGTAGGAAATGCCCCACCCAGTT-CTTTGTTTTTCTTAGAGCAGATCTATTGTAAATTTTAAAATCCAAGGAAGTAATCCTCACAGCGGTCTCAGAAGGTGCCTTCTCCCAGGGCAGAGCCTGTGGTATGGTGTGGGGTCTGGGCAGTCCTGGC-ATTGGGGCCATCTGTGCAGCT--TGTGCATTTCTGTG--------------TTTTGTTCTACAATAAAAGGGTTTGTTATTGTTTGGTTGT----TTTTGTTTTTAGTTAACGGCTTTA---AGGTTAGTTTGCCTTTGAAGAAAAAGTAAC-TGGGTTA-----TT i calJac3.chr5 T 17476 I 595 e canFam3.chr9 57403468 9057 - 61074082 T a score=1902441.000000 s hg38.chr17_GL383566v1_alt 14962 667 + 90219 AGGAACTCAGGTC---GTCTTCTATCCAAATCACGGGGCTGCTGTGACCTGTGGCACAGGTGCCATTGAGG-ACATGTCCTGCACTAGCTCGTGTCTGG-TCCGATGTGCGTGCCGGCTGTGCCGAGGGCAGCAGCTTCCGTGTTCCTGGTCGCTTCTGTTCCCCAGGAGAGAATCTGAGGTTGTTCCAATTAAAGCTCTGTCCCCTGTGGTGTACTGTCTGTGACCTGTCCTGCCTTCAAATAGAAGCAACCAGACTATTTCCCACTCCGACCTTGCCTTTGGGCTTAAGAAACTGTCAC-----CAGGACCCAGTTTTGACAGTGACAAA----TCATCATGAGCCCttactgagtctctttgcactgtccccagccactttatgtccgattagagacacgagggagagaaaaacctgctgcctgccctctctgag------ctgagaaccagtgagggGCAAGAGGCC-GGTGCAACTCCTGAAGGAGAGAAC--GGGGTGCAGAGAGAAGGGGGACCCTTCCAGCTCCATCTGCAGAGCCATCTCGTTTCCGTTGGGTGAATGTTCAGTCCCAAGTTGAAAGTTAAGTCCTTGTCTGGCTGCCAAGCCCTGCCTGTCCTTTCCACTTTGCCAGGGCGGtgtattagtctgctctcgcattgctataaagaaatacctgagcctggg s panTro4.chr17 76209293 667 + 82630442 AGGAGCTCAGGTC---GTCTTCTATCCAAATCACGGGGCTGCTGTGGCCTGTGGCACAGGTGCCATTGAGG-ACGTGTCCTGCACTAGCTCGTGTCTGG-TCCGATGTGCGTGCCGGCTGTGCCGAGGGCAGCAGCTTCTGTGTTCCTGGTCGCTTCTGTTCCCCAGGAGAGAATCTGAGGTTGTTCCAATTAAAGCTCTGTCCCCTGCGGTGTACTGTCTGTGACCTGTCCTGCCTTCAAATAGAAGCAACCAGACTATTTCCCACTCCGACCTTGCCTTTGGGCTTAAGAAACTGTCAC-----CAGGACCCAGTTTTGACAGTGACACA----TCATCatgagcacttaccgagtctctttgcactgtccccagccactttatgtccgattagagacacgagggagagaaaaacctgctgcctgccctctctgag------ctgagaaccagtgagggGCAAGAGGCC-GGTGCAACTCCTGAAGGAGAGAAC--GGGGTGCAGAGAGAAGGGGGACCCTTCCAGCTCCATCTGCAGAGCCATCTCATTTCCGTTGGGTGAATGTTCAGTCCCAAGTTGAAAGTTAAGTCCTTGTTTGGCTGCCAAGCCCTGCCTGTCCTTTCCACTTTGCCAGGGCGGtgtattagtctgctctcgcattgctataaagaaatacctgagcctggg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67307183 666 + 73212453 AGGAACTCAGGTC---TTCTTCTATCCAAATCACGGGGCTGCTGTGACCTGTGGCACAGGTGCCATGGAGG-ATGTGCCCTGCACTAGCTCATGTCTGG-TCCGATGTGCGTGCTGGCTGTGCCGAGGGCAGCAGCTTCCGTGTTCCTGGTCGCTTCTGTTCCCCAGGAGAGAATCTGAGGTTGTTCCAATTAAAGCTCTGTCCCCTGCGGTGTGCTGTCTGTGACCTGTCCTGCCTTCAGTTAGAAGCAACCAGACTATTTCCCACTCCAACCTTGCCTTTGGGCTTAAGAAACTGTCAC-----CAGGACCCAGTTTTGACAGTGACAGA----TCATCATGAGGCCTTACTGTGTCTCTTTGCACTGTCCCCAGCCACTTTATGTCCGATTAGAGACATGAGGGAGAGAAAAACCTGCTGCCTGCCCTCTCTGAGC----TCTGAGAACCAGTGAGGGGCAAGAGGCC-GGTGCAACT-CTGATGGAGAGAACAGGGGGTGCAGAGAGAAGGGGGACCCCTCCAGCTCCATCTGCAGAGCCATCTCATTTCTGTTGGGTGCATGTTCAGTCCCAAGTTGAAAGTTAAGTCCTTGTCTGGCTGCCAAGCCCTGC----CCTTTCCACTTTGCCAGGCCGGtgtattagtctgctctcgcattgctataaagaaatacctgagcctggg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3631229 663 - 94967081 AGGAACTCAGG------TCTTCTATCCAAATCACGGGGCTGCTGTGACCTGTGGCACAGGTGCCATCGGGG-ATCTGCCCTGCACTAGCTCGTGTCTGG-TCCGATGTGCGTGCTGGCTGTGCCGAGGGCAGCAGCTTCCGTGTGCCTGGTCGCTTCTGTTCCCCAGGAGAGAATCTGAGGTTGTTCCAGTTAAAGCTCTGTCCCCTGCGGTGTGCTGTTTGTCACCTGTCCTGCCTTCAAATAGAAGCAACCAGACTATTTCCCACTCCGACCTTGCCTTTGGGCTTAAGAAACTGTCAC-----CAGGACCCAGTTTTGACAGTGACAAG----TCATCATGAGCCCttaccgagtctctttgcactgtgcccagccactttatgtccgattagagacaccaggtagagaaaaacctgctgtctgccctctctgagc----tctgagaaccagtgagggGCAAGAGGCCAGGTGCAACTCCTGATGGCGAGAAC--GGGCTGCAGAGAGAAGGGGGACCCCTCCAGCTCCATTTGCAGAGCCATCTCGTTTCCGTTGGGTGCATGTTCAGTCCCAAGTTGAAAGTTAAGTCCTTGTCTGGCTGCCAAGCCCTGC----CTTCTCCACTTTGCCAGGCCGGtgtattagtctcctctcgcatcgctataaagaaatatctgTggccggg i nomLeu3.chr14 C 0 I 2067 s rheMac3.chr16 74799561 670 + 80904711 AGGAACTCAGGTG---TTCTTCTATCCAAATCACGGGGCTGCTGTGACCTGTGGCACAGGTGCCATCGGGG-ATGTGCCCTGCAGTAGCTCATGTCTGG-TCCGGTGTGCCTGCTGGCTGTGCCGAGGGCGGCAGCTTCCATGTTCGTGGTCGCTTCTGTTCCCCACGAGAGAATCTGAGGTTGTTCCAAGTAAAGCTCTGTCCCCTGCGGTGTGCTGTCTGTGACCTGTCCTGCCGTCAGATAGAAGCAACCAGACTATTTCCCACTCCGACCTTGCCTTTGGGCTTAAGAAACTGTCACCAGGACAGGACCCAGTTTTGACAGTGACAAA----TCATCATGAGCCCTCACCGAGTCTC--TGCACTGGCCCCAGCCACTTTATGTCTGATTAGAGACACGAGGGAGAGGAAAACCTGCTGCCTGCCCTCTCTGAGC----TCTGAGAACCAGTGA-GGGCAAGAGGCCTGGTGCAACTCCTGATGGAGAGAACAGGGGCTTCGGAGAGAAGGGAGACCCTTCCGGCTCCATCTGCAGAGCCATCTCATGTCTGCTGAGTGCATGTTTAGTCCCAAGTTGAAAGTGAAGTCCTTGTCTGGCTGCCAAGCCCTGC----GCTTTCCCCTTTGCCAGGCCAGtgtattagtctgctctcgcactgctataaagaaatacctgagcctggg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74608372 673 + 80997621 AGGAACTCAGGTGTTCTTCTTCTATCCAAATCACGGGGCTGCTGTGACCTGTGGCACAGGTGCCATCGGGG-ATGTGCCCTGCAGTAGCTCATGTCTGG-TCCGGTGTGCCTGCTGGCTGTGCCGAGGGCGGCAGCTTCCATGTTCGTGGTCGCTTCTGTTCCCCACGAGAGAATCTGAGGTTGTTCCAAGTAAAGCTCTGTCCCCTGCGGTGTGCTGTCTGTGACCTGTCCTGCCGTCAGATAGAAGCAACCAGACTATTTCCCACTCCGACCTTGCCTTTGGGCTTAAGAAACTGTCACCAGGACAGGACCCAGTTTTGACAGTGACAAA----TCATCATGAGCCCTCACCGAGTCTC--TGCACTGGCCCCAGCCACTTTACGTCTGATTAGAGACACGAGGGAGAGGAAAACCTGCTGCCTGCCCTCTCTGAGC----TCTGAGAACCAGTGA-GGGCAAGAGGCCTGGTGCAACTCCTGATGGAGAGAACAGGGGCTTCGGAGAGAAGGGAGACCCTTCCGGCTCCATCTGCAGAGCCATCTCATGTCTGCTGAGTGCATGTTTAGTCCCAAGTTGAAAGTGAAGTCCTTGTCTGGCTGCCAAGCCCTGC----GCTTTCCACTTTGCCAGGCCAGtgtattagtctgctctcgcactgctataaagaaatacctgagcctggg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68613391 673 + 74645514 AGGAACTCAGGTTTTCTTCTTCTAGCCAAATCACGGGGCTGCTGTGACCTGTGGCACAGGTGCCATCGGGG-ATGTGCCctgcagtagctcatgtctgg-TCCGGTGTGCCTGCTGGCTGTGCCGAGGGTGGCAGCTTCCATGTTCGTGGTCGCTTCTGTTCCCCACGAGAGAATGTGAAGTTGTTCCAAGTAAAGCTCTGTCCCCTGCGGTGTGCTGTCTGTGACCTGTCCTGCCGTCAGATAGAAGCAACCAGACTATTTCCCACTCCGACCTTGCCTTTGGGTTTAAGAAACTGTCACCAGGACAGGACCCAGTTTTGACCGTGACAAA----TCATCATGAGCCCTCACCGAGTCTC--TGCACTGGCCCCAGCCACTTTACGTCTGATTAGAGACACGAGGGAGAGGAAAACCTGCTGCCTGCCCTCTCTGAGC----TCTGAGAACCAGTGA-GGGCAAGAGGCCTGGTGCAACTCCTGATGGAGAGAACAGGGGCTTCAGAGAGAAGGGAGACCCTTCCGGCTCCATCTGCAGAGCCATCTCATGTCTGCTGAGTGCATGTTTAGTCCCAAGTTGAAAGTGAAGTCCTTGTCTGGCTGCCAAGCCCTGC----GCTTTCCACTTTGCCAGgccagtgtattagtctgctctcgcactgctataaagaaatacctgagcctggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30666493 673 - 75148670 AGGAACTCAGGTTTTCTTCTTCTATCCAAATCACAGGGCTGCTGTGACCTGTGGCACAGGTGCCATCAGGG-ATGTGCCCTGCACTAGCTCATGTCTGG-TCCGGTGTGCCTGCTGGCTGTGCCAAGGGCGGCAGCTTCCATGTTCGTGGTCGCTTCTGTTCCCCACGAGAGAATCTGAGGTTGTTCCAAGTAAAGCTCTGTCCCCTGCGGTGTGCTGTCTGTGACCTGTCCTGCCGCCAGATAGAAGCAACCGGACTATTTCCCACTCCGACCTTGCCTTTGGGCTTAAGAAACTGTCACCAGGACAGGACCCAGTTTTGACAGTGACAAA----TCATCATGAGCCCTTACCGAGTCTC--TGCACTGGCCCCAGCCACTTTACGTCTGATTAGAGACACGAGGGAGAGAAAAGCCTGCTGCCTGCCCTCTCTGAGC----TCTGAGAACCAGTGA-GGCCAAGAGGCCTGGTGCAACTCCTGATGGACAGAACAGGGGCTTCGGAGAGAAGGGAGACCCTTCCGGCTCCATCTGCAGAGCCAGCTCATGTCTGCTGAGTGCATGTTTAGTCCCAAGTTGAAAGCGAAGTCCTTGTCTGGCTGCCAAGCCCTGC----CCTTTCCACTTTGCCAGGCCGGtgtattagtctgctctcgcattgctataaagaaatacccgaacctggg i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126493112 672 + 159171411 AGGACCTCAGGAT----TTTTTTAGCCAAATCATGAGGCTGCTGTGACCTGTGGCACAGATGCCCTCGGGGTATGTTCCATGCACTGGCTGGTGTCTGGCCCCGGTGTGCGTGGTGGCTGTGCCGAGGACAGCAGCCTCCATGTTCCTAGTCACTTCTGTTCTCCAGGAGAGAATCTGAGGTGGTTCCAATGAAAGCTCTGT-CCCTGCGGTGTGCTGTCTGTGACCTGTCCTGCCTTCAAATAGAAGCAGCCAGAC--TCTCCCACTCCCACCTTGCCTTTGGGCTTAAGAACCTG-CAT-----CAGGACCCAGTTTTGACAGTGACAAAAAACTCATCACAAGCCCTTACTGTGTCTCTCTGCACTGTCCCCAGCCAGGTTATGTCCGATTAGAGACACGAGGGAGAGAAGAACCTGCTGTCTGCCCTCTCAGGGCTCTTTCTGAGAACCAGTAAGGGACAAGAGACCTAGTGTCACTCCTGATGGAGAGAACAGAGGCTGCAGAGACAAGGGGGACCC-TGTGGCTCCATGTGTAGAGCCGTCTCATTTTTGCTGAGTACATATTCAGTCCGAAGTTGAAGGTTAAGTCCTTGTCTGGCTGCCAAGCCCTGC----CCTTTCCACCTTGCCAGGCTGGtgtactagttcgctcccacatcgctataaagaaatacctgagcctggg i calJac3.chr5 I 595 C 0 e canFam3.chr9 57403468 9057 - 61074082 T a score=57168.000000 s hg38.chr17_GL383566v1_alt 15629 24 + 90219 taatttataaagaaaacgggtttc s panTro4.chr17 76209960 24 + 82630442 taatttataaagaaaacgggtttc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67307849 24 + 73212453 taatttataaaagaaacgggtttc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74800231 24 + 80904711 taatttataaagaaaacggatttc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74609045 24 + 80997621 taatttataaagaaaacggatttc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68614064 24 + 74645514 taatttataaagaaaacggATTtc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30667166 24 - 75148670 taatttataaagaaaacggatttc i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126493784 24 + 159171411 taatttataaagaaaaggggtttc i calJac3.chr5 C 0 I 447 e nomLeu3.chr14 3631892 2067 - 94967081 I e canFam3.chr9 57403468 9057 - 61074082 T a score=735697.000000 s hg38.chr17_GL383566v1_alt 15653 448 + 90219 attggctcacggttctgcaggctactggaagcatggcggcatctgtttctggggaggcctcggggagctttcactcat-gtggaaggtagagcgggaacaggcttctgatatggcaggagcaggagcaagacacagccaggggaaggttgccacacac-ttttttttttt---------------tgagatggagtcttgttctgtcacccagactggagtgcagtggtgcaatctcggctcactgcaacctccgcctcctgggtttaagcaactctcctgcctcagcctcccgagtagctgggactacaggtgggtgccaccacacccggctaatttttttgtatttttagtagagaacgggatttcaccatattagccatgatggtctcgatctcctgacctcgtgatctgcccgcctcagcctctcaaagtgctgggattacaggcgtgagccaccgcatcc s panTro4.chr17 76209984 446 + 82630442 attggctcacggttctgcaggctactggaagcatggcggcatctgtttctggggaggcctcggggagctttcactcat-gtggaaggtagagcgggagcaggcttctgacatggcaggagcaggagcaagacacagccaggggaaggttgccacacac-ttttttttttt----------------gagatggagtcttgttctgtcgcccagactggagtgcagtggtgcaatctcggctcactgcaacctccgcctcctgggtttaagcaactctcctgcctcagcctcccgagtagctgggactacaggtgggtgccaccacacccggctaatttttt-gtatttttagtagagaacgggatttcaccatattagccatgatggtctcgatctcctgacctcgtgatctgcccacctcagcctcccaaagtgctgggattacaggcgtgagccactgcatcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67307873 454 + 73212453 attggctcacggttctgcaggctactggaagcatagcggcatctgtttctggggaggcctcagggagctttcactcat-gtggaaggtagagcgggagcaggcatctgacatggcaggagcaggaaaaagacacagccaggggaaggttgccacacac-ttttttttttt-------tttttttttgagatggagtcttgttctgtcgcccaggctggagtgcagtggtgcaatctcagctcactgcaacctccgcctcctgggtttaagcaactctcctgcctcagcttcccgagtagctgggactacaggtgggtgccaccacacccggctaatttttt-gtatttttagtagag-acgggatttcaccatattagccacgatggtctcgatctcctgacctcatgatctgccggcctcagcctcccaaagtgctgggattacaggcgtgagctaccgcatcc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74800255 434 + 80904711 attggctcacggttctgcaggctactggaagcatggcggcatctgtttccagggaggcctcagggagctttcactcatggtggaagaca----------------------------gagcaggagcaagagagagccagagggaggttgccacacac-tttttttttttccttcttttttttttggagatggcgtcttgctctgtcgcccaggctggagtgcagtggtgccatctcggctcactgcagcctccgcctcctgggtttaagcaattctcatgcctcagcctccccagtagctgcgactacaggcaggtgctaccaacccccgctaatttttt-gtattattagtagag-atgggatttcaccatattagccatgatggtctcgatctcgtgccctcatgatctgcccgccttggcatcccacagtgctgggattacaggtgtgagccaccgcaccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74609069 435 + 80997621 attggctcacggttctgcaggctactggaagcatggcggcatctgtttccagggaggcctcagggagctttcactcatggtggaagaca----------------------------gagcaggagcaagagagagccagagggaggttgccacacactttttttttttttccttctttttttttggagatggagtcttgctctgtcgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccgcctcctgggtttaagcaattctcctgcctcagcctcccgagtagctgcgactacaggcaggtgctaccacccccagctaatttttt-gtattattagtagag-atgggatttcaccatattagccatgatggtctcgatctcgtgacctcatgatctgcccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgcaccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68614088 434 + 74645514 attggctcacggttctgcaggctacTGGAAGCATGGCGGCATCTGTttccggggaggcctcagggagctttcactcatggtggaagaca----------------------------gagcaggagcaagagagagccaGAGGGAGGttgccacacac-tttttttttttttccttcttttttttggagatggagtcttgctctgtcgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccgcctcctgggtttaagcaattctcctgcctcagcctcccgagtagctgcgactacaggcaggtgccaccacccccagctaatttttt-gtatttttagtagag-atgggatttcaccatattagccatgatggtctcaatctcatgacctcatgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30667190 454 - 75148670 attggctcacggttctgcaggctactggaagcatggcggcatctgtttccggggaggcctcagggagctttcactcatggtggaagacagagcaggagcaggcatcttacctggcaggagcaggagcaagagagagccagagggaggttgccacacac-tttttttttttttccttcttttttttggagatagagtcttgctctgtcgcccaggctggagtgcag--------tctcggcttactgcaacctccacctcctaggtttaagcaattctcctgcctcagcctcctgagtagctgggactacagacgggtgccaccacctccagctaatttttt-gtatttttagtagag-atgggatttcactgtattagccatgatggtcttgatctcgtgacctcatgatctgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgccc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3631892 2067 - 94967081 I e canFam3.chr9 57403468 9057 - 61074082 T e calJac3.chr5 126493808 447 + 159171411 I a score=1317680.000000 s hg38.chr17_GL383566v1_alt 16101 592 + 90219 agcct-gccacacactttttaacaaccagatcttttggtaactcactcactatacagtaccaaggga-----------------------------------ggatggtgcattagtccatcctcattctgctaataaggacatacccaagactgggtaacttataaacagaaaaggcttaattgagtcccagttcagcatggcttgggaggcctcaggaaactt-acaaccatggcagaaggggaagcaaacacatgtccttctccacatggcagcaggaaggagaagtacagaatgaaagtggggaaagccccttataaaaccatcagatctcatgagaactaactcaatatcatgagaacagcatgggggaactgcctccatgatccaattgcctcccactgggtccctctcaccacggg-----tggggattatgagatttgggtggggacacagccaaaccatattagatggtgctaagccattcatgagaatgccacctgcataatc----cagtcacctcccaccaggccccaccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCAGTTTACACCCAAGAGTGAAGCCAAGCAA s panTro4.chr17 76210430 593 + 82630442 agccttgccacacactttttaacaaccagatcttttggtaactcactcactatacagtaccaaggga-----------------------------------ggatggtgcattagtccatcctcattctgctaataaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtcccagttcagcatggcttgggaggcctcaggaaactt-acaaccatggcagaaggggaagcaaacacatgtccttctccacatggcagcaggaaggagaagtacagagtgaaagcggggaaagccccttataaaaccgtcagatctcatgagaactaactcaatatcatgagaacagcatgggggaactgcctccatgatccaattgcctcccactgggtccctctcaccacggg-----tggggattatgagatttgggtggggacacagccaaaccatattagatggtgctaagccattcatgagaatgccacctgcataatc----cagtcacctcccaccaggccccaccttcaacactgggaattacaattcaaaatgagatttgggtggggacatggatccaaaccgtatcaGCCAGCTTACACCCAAGAGTGAAGCCAAGCAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67308327 593 + 73212453 agcct-gccacacactttttaacaaccagatctctcggtaactcactcactgtacagtaccaaggga-----------------------------------ggatggtgtattagtccatcctcattctgctaataaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtctcagttcagcatggcttgggaggcctcaggaaacttaacaatcatggcagaaggagaagcaaacacatgtccttctccacatggcagcaggaaggagaggtacagagtgaaagcagggaaagccccttataaaaccatcagatctcatgagaactaactcagtatcatgagaacagcatgggggaactgcccccatgctccagttgcctcccactgggtccctctcaccacggg-----tgggtattatgagatttgggtggggacacagccaaaccatattagatggtgctaagccattcatgagaatgccacctgcataatc----cagtcacctcccaccaggccccaccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCAGTTTACACCCAAGAGTGAAGCCAAGCAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74800689 623 + 80904711 ggccc-accacacactttttaacaaccagatctcttggtaactcactcactatgcagtaccaagggggaatggtgtattagtccatcctcattctgcagggggaatggtgtattagtccatcctcgttctgc---taaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacacaggcc---ctccacatggcagcagga---agaaatacagcgtgagggcggggaaagccccttgtaaaaccatcagatctcatgagaactaactcaatatcatgagaacagcatggaggaactgcccgcatgatcccgttgcctcccactgggtcccactcaccacggggactatggggattacgagatttgggtggggacacagccaaaccatattagatggtactgagccattcacgggaataccacctgcagaatc----cagtcacctcccgccaggccctgccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCCGTGTACACCCAAGAGTGAAGTCAAGCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74609504 588 + 80997621 ggccc-gccacacactttttaacaaccagatctcttggtaactcactcactatgcagtaccaagggg-----------------------------------gaatggtgtattagtccatcctcgttctgc---taaggacatacccaagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacacaggcc---ctccacatggcagcagga---agaaatacagcgtgagggcggggaaagccccttgtaaaaccatcagatctcatgagaactaactcaatatcatgagaacagcatggaggaactgcccgcatgatcccgttgcctcccactgggtcccacacaccacggggactatggggattacgagatttgggtggggacacagccaaaccatattagatggtactgagccattcacgggaataccacctgcagaatc----cagtcacctcccgccaggccctgccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcaGCCCGTGTACACCCAAGAGTGAAGTCAAGCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68614522 588 + 74645514 ggccc-gccaCACACTTTTTAACAACCAAATCTCTTGGTAACTCACTCACTATGCAGTACCAAGGGG-----------------------------------gaatggtgtattagtccatcctCGTTCTGC---Taaggacatacccgagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacacaggCC---Ctccacatggcagcagga---agaagtaCAGCGTGAAGGCGGGgaaagccccttgtaaaaccgtcagatctcatgagaactaactcaatatcatgagaacagcatggaggaactGCCCGCATGATCCTgttgcctcccactgggtcccactCACCACGGGGACTATGGGGAttacgagatttgggtggggacacagccaaaccatattagatgGTACTGAGCCATTCACAGGAATACCACCTGCAGAATC----CAGTCACCTCCCGCCAGGCCCtgccttcaacactggggattacaattcaaaatgagatttgggtggggacatggatccaaaccatatcagcccgTGTACACCCAAGAGTGAAGTCAAGCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30667644 591 - 75148670 agccc-gccacacactttttaacaaccagatctcttggtaactcactcactatacagtaccaagggg-----------------------------------gaatggtgtattagtccatcctcgttctgc---taaggacatacccgagactgggtaacttataaacagaaaaggtttaattgagtcacagttcagcatggctggggaggcctcaggaaactt-acaaccatggcggaaggggaagcaaacagaggcc---cttcacatggcagcagga---agaagtacagcgtgaaggcgcagaaagcctcttgtaaaaccgtcagatctcatgagaactaactcaatatcatgagaacagcatggagcaactgcccgcatgatcccgttgcctcccactgggtcccactcaccacggggactatggggattatgagatttgggtggggacacagccaaaccatattagatggtgctgagccattcacgagaataccacctgcagaatccagtcagtcacctcccgccaggccctg-cttcaacactggggattacagttcaaaatgatatttgggtggggacatggatccaaaccatatcaGCCCGTGTACACCCAAGAGTGAAGTCAAGCAA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126494255 574 + 159171411 aggct-gccacac----ttcaacaaccagatctcttgataactcactcactatactgtatcaagaaa-----------------------------------gagtggtgtatttgtccgtcctcattctgcta-aaaggacatacccaagactgggtaacttataaatgaaaaatgtttaattgactcacagttcagcatggcaggggaggcctgaggaaactt-acagtcatggcaaaaggggaagcaaac----gtccttcttcacatgacagtggga---agaagtacagcgtggaggcggggaaagccccttatgaaaccctcacatctcatgagaactaactcaatatcatgagaacagcatgggggaactgctcctatgatccaattacttcccactgggtccctctcaccacagg-----tggggactatgggatttgggtagggacacagccaaaccatatcagatggtgctaagccattcatgagaatgccaccagc----------cagtcacctcccagtcagccccgccttcaacactggggattgcaattcaaaatgagatttgacaggggacgtggatccaaaccatattaGCTGGTTTACACCCAAGAGTGAAGCCAAGCAA i calJac3.chr5 I 447 C 0 e nomLeu3.chr14 3631892 2067 - 94967081 I e canFam3.chr9 57403468 9057 - 61074082 T a score=482621.000000 s hg38.chr17_GL383566v1_alt 16693 199 + 90219 CAGCCCCCTAAGGCGGAGGCCCCTGGAGGTAGTCCTGGCTCT-GCCAAGAGTCACTCCTCCTCTGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTGCCCCCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-GAGGGGAGACCCTCCAGCCCTCA-----TGTCCACTGGAGT s panTro4.chr17 76211023 199 + 82630442 CAGCCCCCTAAGGCGGAGGCCCCTGGAGGTAGTCCTGGCTCT-GCCAAGAGTCACTCCTCCTCTGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTGCCCCCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-GGGGGGAGACCCTCCAGCCCTCA-----TGTCCACTGGAGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67308920 198 + 73212453 CAGCTCCCTAAGGTGGA-GCCCCCGGAAGTGGTCCTGGCTCT-GCCAAGAGTCACTCCTCCCCTGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTGCCCCCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-AGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGAGT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74801312 198 + 80904711 CAGCCCCCTAAGGTGGAGCCCTCTGGAGGTGGCCCTGGCTCT-GCCAAGAGCCACTCCT-CCCCGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGCTCTGCCCTTGGAGTCAGAGCCACGGGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610092 198 + 80997621 CAGCCCCCTAAGGTGGAGCCCTCTGGAGGTGGCCCTGGCTCT-GCCAAGAGCCACTCCT-CCCCGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGCTCTGCCCTTGGAGTCAGAGCCACGGGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615110 199 + 74645514 CAGCCCCCTGAGGTGGAGCCCTCTGGAGGTGACCCTGGCTCT-GCCAAGAGCCACTCCTGCCCTGGCACTATCCTGTG-------------------TCTCTTATAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGCTCTGCCCTTGGAGTCAGAGCCACgggggggAGATCCTCCAGCCCTCA-----TGTCCACTGGAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668235 197 - 75148670 CAGCCCCCTAAGGCGGAGCCCTCTGGAGGTGGCCCTGGCTCT-GCCAAGAGCCACTCCT-CCCCGGCACTATCCTGTG-------------------TCTCTTGTAACCTGGCTGAAGCTCTCAGAGCTTGGGGCAGTGACAGCCTTTG-CCCTTTTAGTTCTGCCCTTGGAGTCAGAGCCAC-GGGGGGAGATCCTCCAGCCCTCA-----TGTCCACTGGAGT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126494829 202 + 159171411 CAGCTCCCCAAGGTGGAGCCCTCTGGAGGTGATCCTGGTTCT-GCCAAGAGCCACTCCTCCCCTGGCACCATCCTGTG-------------------TCTCTCGTAACCTGGCTGAAGCTCTCAGAGA-TGGGGCAGTGACAGCTTTGG-CTTCTTCAGCTCTGCCCTTGGAGTCAGAGCCAC-AGGGGGAAATCCTCCAGCCTGCGTGCTTTGCCTACTGGTGT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57394411 195 - 61074082 CGGCCCCCT---------GCCGCTGACAGTGGTCACCGCCCTGGCCGGGAAT--GTCCTCCCCCGATGCCACCTTGTGGCCACATTGCAGACACGCATCCCCCGTCCCCC-GCTGGGGC-------GGTGATGACGATGACGTCCTTTC-----TCCAGCTCTACCCTGCAAGTCAGAGCCAT-GGGTGGAGATTCTCCAGCCCTTG-----TGTCTCCTAAAAT i canFam3.chr9 T 9057 I 21 e nomLeu3.chr14 3631892 2067 - 94967081 I a score=690971.000000 s hg38.chr17_GL383566v1_alt 16892 317 + 90219 CCTACCCGGGTCCCTTTTTTTGTGTGTGGGTTGTTGGTTCGtttgttttttcttgatatggagtttcactcttgtctcccaggctggagtgaaatggcgcgatcttggctcactgcaacctctgcttcctgggttcaagtgattctcctgcctcagcctcttgagtatctgggattacagtcacctgccaccactcccggctaattttgtata-tttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccatctcggcctcccaaagtgctgggattacagg s panTro4.chr17 76211222 317 + 82630442 CCTACCTGGGTCCCTTTTCTTGTGTGTGCGTTGTTGGTTCGtttgttttttcttgatatggagtttcactcttgtctcccaggctggagtgaaatggcgccatcttggctcactgcaacctctgcttcctgggttcaagtgattctcctgcctcagcctcttgagtgtctgggattacagtcacctgccaccactcccggataattttgtata-tttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggattacagg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309118 313 + 73212453 CCTACCTGGGTCCCTTTTTTTGTGTGTGGGtt----ttttgtttgttttttcttgatatggagtttcactcttgtcacccaggctggagtgaaatggcgcgatcttggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcttgagtatctgggattatagtcacctgccaccactccctgctaattttttata-tttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacgtcaggtgatccacctgcctcggcctcccaaagtgctaggattacagg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74801510 317 + 80904711 CTTACCTGGGTCCCTTTTTTGGGGTGTGGAGtttttgtttgtttgttttttattgatacggagtttcactcttgtcacccaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccgggttcaagtgattctcctgcctcagcctcttgagtagctgggattacagtcacctgccaccactcccagctaatcttttata-gttttagtacagacggggtttcaccatgttggccaggctggtctcaaactcccgtccccaggtgatccatccacctcggcctcccaaagtcctgggattgcagg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610290 317 + 80997621 CTTACCTGGGTCCCTTTTTTTGTGTGTGGAGtttttgtttgtttgttttttattgatacggagtttcactcttgtcacccaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccgggttcaagtgattctcctgcctcagcctcttgagtagctgggattacagtcacctgccaccactcccagctaattttttata-gttttagtacagacggggtttcaccatgttggccaggctggtctcaaactcccgacctcaggtgatccatccacctcggcctcccaaagtcctgggattacagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615309 317 + 74645514 CTTACCTGGgtccctttttttgtgtgtgggtttttggtttgtttgttttttattgatatggagattcactcttgtcacctaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccaggttcaagtgattctcctgcctcagcctcttgagtatctgggattacagtcacctgccaccactcccagctaattttttata-gttttagtacagacggggtttcaccatgttggccaggctggtctcaaactcccgacctcaggcgatccatccacctcggcctcccaaagtgctgggattacagg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668432 317 - 75148670 CTTACCTGGGTCCCTGTTTTTGTGTGTGGGGtttttgtttgtttgttttttattgatacggagtttcattcttgtcacccaggctggagtgaaatggcgtgatcttgtctcactgcaacctctgccttccgggttcaagtgattctcctgcctcagcctcttgagaatctgggattacagtcacctgccaccactcccagctaattttttata-tttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcccgacctcaggcgatccatccaccttggcctcccaaagtgctgggattacaag i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126495031 289 + 159171411 GTTACCTGGGTCAtttttttt------------------------tttttttttgata---agtttcactcttgtcacc-aggctggaatgcaatggcacaatctcagctcactgcaatctctgcctcttgggctcaagtgattctcctgcctccgcctcctgagtagctgggattgcagtcacctgccacca-tcccagttaattttttgtattttttagtaaagacagggtttcactatgttagtcaggctggtctgaaactcctgacctcgggtgatccacctgcctcagcctccgaaagtgctgggattacagg i calJac3.chr5 C 0 M 3653 e nomLeu3.chr14 3631892 2067 - 94967081 I e canFam3.chr9 57394606 21 - 61074082 I a score=56124.000000 s hg38.chr17_GL383566v1_alt 17209 28 + 90219 cttgagccactgcgcccagccTTACCtg s panTro4.chr17 76211539 28 + 82630442 cttgagccactgcgcccagccTTACCtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309431 28 + 73212453 cttgagccactgcacccagccTTACCtg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74801827 28 + 80904711 cttgagccactgcgcccagccTTACCtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610607 28 + 80997621 cttgagccactgcgcccagccTTACCtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615626 28 + 74645514 cttgagccactgcgcccagccttaccTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668749 28 - 75148670 cttgagccactgcgcccagccTTACCtg i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3631892 2067 - 94967081 I e canFam3.chr9 57394606 21 - 61074082 I e calJac3.chr5 126495320 3653 + 159171411 M a score=16044.000000 s hg38.chr17_GL383566v1_alt 17237 6 + 90219 ggtact s panTro4.chr17 76211567 6 + 82630442 ggtact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309459 6 + 73212453 ggtact i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3633959 6 - 94967081 GGtact i nomLeu3.chr14 I 2067 C 0 s rheMac3.chr16 74801855 6 + 80904711 ggtact i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610635 6 + 80997621 ggtact i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615654 6 + 74645514 GGtact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668777 6 - 75148670 ggtact i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57394606 21 - 61074082 I e calJac3.chr5 126495320 3653 + 159171411 M a score=1450465.000000 s hg38.chr17_GL383566v1_alt 17243 594 + 90219 tttatgtgtcagcttgactgggccacg-gggttcccagatgtgtggtcagacatta-----ttctg----ggtg-tctgtgggtgagtttaacatttaaatcagtggact----------------gagaggagtagactgtgctccctagtg-tgggggggcctcatccagtcagttgaaggcctgcatagaacaaaaagcctcaccctcccccgaggaagagaa---ttctccggactgcctgccttcagactggg-acactggctttttcctgccttggaacttgaatgctggctcttcttgggcctcaagcct--cagactggaaccctgtggtc-cgctctcctgggcct-ccagcttg-ccgactgcagcagatcttgggac---ttaacctctgcaatcacatgagccgaatccttgtcatc-------------------------------------------------------------tctgtgtgtgtgattctctg--tctctctacacaca-tgtacatacaccctgttgttctg-------tttctataggagaTGTGCTCCAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtatgtgtgtg--------------------------------------------tgtatgtgtgtgtttgGGGTTT-TTCTTCCCATCAATAGGCTTAT s panTro4.chr17 76211573 594 + 82630442 tttatgtgtcagcttgactgggccacg-gggttcccagatgtgtggtcagacatta-----ttctg----ggtg-tctgtgggtgagtttaacacttaaatcagtggact----------------gagaggagtagactgtgctccctagtg-tgggggggcctcatccagtcagttgaaggcctgcatggaacaaaaagcctccccctcccccgaggaagagaa---ttctccggactgcctgccttcagacaggg-acactggctttttcctgcctttgaacttgaatgctggctcttcttgggtctcaagcct--cagactggaaccctgtggtc-cgctctcctgggcct-ctagcttg-ccgactgtagcagatcttgggac---ttaacctctgcaatcacatgagccgaatccttatcatc-------------------------------------------------------------tctgtgtgtgtgattctctg--tctctctacacgta-tgtacatacatcctgttgttctg-------tttctATAGGAGGTGTGCTCCAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCGTATGTGTGTG--------------------------------------------TGTATGTGTGTGTTTGGGGTTT-TTCTTCCCATCAATAGGCTTAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67309465 625 + 73212453 tttatgtgtcagcttgactgggccacg-gggttcccagatgtgtggttagacatta-----ttctg----ggtg-tttgtgggtgagtttaacatttaagtcagtggact----------------gagaggagtagac--tgctccctagtgttgagggggcctcatctagtcagttgaaggcctgcatagaacaaaaaggctcaccctcccctgaggaagagaa---ttctccggcctgcctgccttcacactggg-acattggctttttcctgcctttgaacttgaacgctggctcttcttgggtctcaggcct--cagactggaaccacgtggtc-cgctctcctgggcct-ccagcttg-tcgactgcagcagatcttgggac---ttaacctctgcaatcacatgagccgaatccttatcgtc-------------------------------------------------------------tgtgtgtgtgtgattctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctatagGAGGTGTGCTCCAAAATCCTGCAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtatgtgtgtgtgtgcgtgcctgt------gtgtgcgtgtgtgtgt--------ctgtgtgtgtgtgtTTGGGGTTT-TTCTCCCCATCAATAGGCTTAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3633965 684 - 94967081 tttatgtgtcagcctgactgggccatgtgggttcccagatgtgtggtcagacatta-----ttctg----ggtg-tttgtgggtgagtttaacatttaaatcagtggact----------------gagaggagtagactgtgctccctcgtg-agggggggcctcatccagttagttgaaggcccgcatagaacaaaaaggctcaccctcccccggggaagagaa---ttctccggcctgcctgccttcagactgggcacattggctttttcctgcctttgaacttgaatgctggctcttcttgggtctcagacct--cagactggaaccacgtggtc-cgctctcctgggcct-ccagcttg-ccgactgcagcagatcttggcac---ttaacctctgcaatcacatgagccgaatccttatcatctgtgtgcgtagattctctgtctctctctacacatatgtacatacatcctgtttccttatcatctgtGTGTGTGATTCTCTGTCTCTCTCTACACATA-TGTACATACATCCTGTTGTTCTG-------TTTCTATAGGAGGTGTGCT-CAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtgtgtgtgtgtgtgcgtgcatgt------gtgtgcatgcgtg------------tgtgtgtgtgtgtgtgGGGATT-TTCTCCCCGTCAATAGGCTTAT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74801861 619 + 80904711 tttatgtgtcaacttgactgggccacg-gggttcccagatgtgtgttcagacatta-----ttctg----ggtg-tttgtgggcgagtttgacatttaaaccagtggagtagagtagagtaccagtgagaagagttgactgtgttccctagtg-tg----------------------------------agaacagaaaagctcaccctccccagaggaagagaa---ttctccggcctgcctatcttcaggctggg-acatgggctttttcctgcctttgaacttgaacgctggctcttcttgggtctcaagcct--cagac--gaaccatgtggtc-caccctcctgggcctcccagcttg-ctgactgcggcagatcttgggac---ttaacctctgaaatcacatgagccaaatccttatcatc-------------------------------------------------------------tgtgtgtatgtggttctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctatagGAAGTGTGCTCCAAAATCCTGGCACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTCgtgtgtgtgcgtgtgtgtgtgtgc--atgtgtgtgtgtgtgcgtgtgtgcatgcgtgtgtgtgtgtgtatgGGGTTT-TTCTCCCCATCAATAGGCTTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74610641 615 + 80997621 tttatgtgtcaacttgactgggccacg-gggttcccagatgtgtgttcagacatta-----ttctg----ggtg-tttgtgggcgagtttgacatttaaaccagtggagtagagtagagtaccagggagaagagttgactgtgttccctagtg-tg----------------------------------agaacagaaaggctcaccctccccagaggaagagaa---ttctccggcctgcctatcttcaggctggg-acatgggctttttcctgcctttgaacttgaacgctggctcttcttgggtctcaagcct--cagac--gaaccatgtggtc-caccctcctgggcctcccagcttg-ctgactgcggcagatcttgggac---ttaacctctgaaatcacatgagccaaatccttatcatc-------------------------------------------------------------tgtgtgtatgtggttctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctATAGGAAGTGTGCTCCAAAATCCTGGCACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTcgtgtgtgtgcgtgtgtgtgtgtgc------gtgtgtgtgtgcgtgtgtgcatgcgtgtgtgtgtgtgtATGGGGTTT-TTCTCCCCATCAATAGGCTTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68615660 642 + 74645514 tttatgtgtcaacttgactgggccatg-gggttCCCAGATGTGTGGCCagacatta-----ttctg----ggtg-tttgtGGGCGAGTTTAACATTTAAACCAGTGGAGTAGAGTTGAGTACCAGTGAGAAGAGTTGAGTGTGTTCCCTAGTG-TG----GGCCTCATCCAGTCAGTTGAAGGCCTGCATAGAACAGAAAGGCTCACCCTCCCCAGAGGAAGAGAA---TTCTCCGGCCTGCCTATCTTCAGACTGGG-ACATGGgctttttcctgcctttgaacTTGAACGCTGGCTCTTCTTGGGTCTCAAGC----TAGAC--GAACCATGTGgtc-caccctcctgggcct-ccagcttg-ctGACTGAGGCAGATCTTGGGAC---TTAACCTCTGCAATCACATGAGCCAAATCCTTATcatc-------------------------------------------------------------tgtgtgtatgtgattgtctgtctctctctacacata-tgtacatacatccTGTTGTTCTG-------TTTCTATAGGAAGTGTGCTCCAAAATCCTGGCACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTggttcatgtgtgtgcatgtgtgtgcatgt------gtgtgtgtgtgcgtgtgtgcatgcgtgtgtgtgtgtgtatggggttt-CTCTCCCCCTCAATAGGCTTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30668783 650 - 75148670 tttatgtgtcaacttgactgggccacg-gggctcccagatgtgtggtcagacatta-----ttctg----ggtg-tctgtgggcgagttgaacatttaaagcagtggagtagagtagagtaccagtgagaagagttgactgtgttccctagtg-tg----ggcctcatccagtcagttgaaggcctgcacagaacagaaaggctcacccttccccgaggaagagaa---ttctccggcctgcctgtcttcagactggg-acatgggctttttcctgcctttgaac-tgaacgctgcctcttcttgggtctcaagcct--cagac--gaaccatgtggtc-caccctcctgggcct-ccagcttgcccgactgcggcagatcttgggac---ttaacctctgtaatcacataagccaaatccttatcatc-------------------------------------------------------------tgtgtgtatgtgattctctgtctctctctacacata-tgtacatacatcctgttgttctg-------tttctatagGAAGTGTGCTCCAAAATCCTGGAACTGCAAAACCTTTGACTTCTACAAAAAA-TGGGTTAATCTGGAATCATCTCTCCTTGGTTtgtgtgtgtgcgtgtgtgtgtgcgtgtgtgtgtgtgcgtgtgtgcatgtgtgtgtgtgtgtgtgtgtgtATGGGGTTT-TTCTCCCCATCAATAGGCTTAT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57394627 587 - 61074082 ttaatgtgtcagtttggctgggccaca-cggtacccagatgtttggtcaaacattccaggtttctgtggaggtgttttttggatgaaattagcagttagatgggtagact---------------tgagtgaagcagat--cgctccctaatg-ag-gtgggccttatccaatcagttgaaggcctgaatggaacaaaagg--ctgccctccccaaaggaaaagaggattcctcctgcctgatagtcttcaaactggg-atatccactttctcttgccttcagactaaaaagt---ctcttcctgggtctcaaacctgctggactagaataataccatcaagccctccagagtct-ccagcttg-ctgact---gcagatcttgggatttgttagcctccataatcatgtgagcc-------tattgcc-----------------------------------------------------------------tatatcagatt-------tccttctatatatgctttctattgattccgactctctgggggatcctcataTGGGAAGTGTGCTCCCAAACCCTGGAATTGCAAAGCCTTTGACTTTTACAAAGAACCTGGTTAATCTGCAATCATCTTTCTCTGGTTTG------------------------------------------------------TGTAGGTGTGTGTTTTGGTTTCAGTTTTTCCATCAATAGGCTTAT i canFam3.chr9 I 21 I 3399 e calJac3.chr5 126495320 3653 + 159171411 M a score=1175530.000000 s hg38.chr17_GL383566v1_alt 17837 528 + 90219 CCCAAccggttgcagtggctcactcctgtaatcccagcactgtaggaggctgaggcaggcagatcgcttgagcccaggggttcgagaccagcctgactaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtggtgggcgccta-taataccagctacttgggaggctgaggcacaagaatcaattgaacctgggaggcagaggttgcagtgagccgagatcgtgccactgcacaccagcctgggtgacagagtgaggctctgtctccaaaaaaaaaaaa--aaaaaaaaaaag--------gaaaaTAaaattaaaacatttttgtggacacctaaaggatcatgggcccAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCCGAGCCCTGCCCTGTGGGTTGGGAAAGAAGGGGACCTGCCCAGTGTCACGGTCAGTGGCCAAGCTGGAC----GACAGGTAATCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGCTCTCCCAGAACCTAGAA s panTro4.chr17 76212167 510 + 82630442 CCCAAccggttgcagtggctcactcctgtaatcccagcactgtaggaggctgaggcaggcagattgcttgagcccaggggttcgagaccagcctggctaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtggtgggcgccta-taataccagctacttgggaggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagtgagccgagatcgtgccactgcacaccagcctgggtgacagagccaggctctttctc------------a--aaaaaaaaaaag--------------aaaattaaaaCATTTTTGTGGACACCTAAAGGATCATGGGCCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCCGAGCCCTGCCCTGCGGAGTGGGAGAGAAGGGGACCTGCCCAGTGTCACCGTCAGTGGCCAAGCTGGAC----GACAGGTAATCCCTGAGTCCTGCCCCAGCCAGACCTGCCCTCTGCTCTCCCAGAACCTAGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67310090 508 + 73212453 CCCAACCAGTTgcagtggctcactcctgtaatcccagcactgtgggaggctgaggcaggcagatcgcttgagcccaggggttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtgatgggcgccta-tcataccagctacttgggaggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagtgagccgagatagtgccactgcactccagcctgggcgacagagcgaggctctgtctc--------aaaaa--aaaaaaaaaaag--------gaaaagaaaattaaaacatttttgtggactcctaaaggatcattggcccAGTGGAGAAGGTGGCCTTCCTCCCTTCCTCAGAGCCCCCGAGCCCTGCCCTGTGGGGTGGGAGGGAAGGGGACCTG------------GTCAGTGGCCAAGCTGGAT----GACAGGTAATCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGCTCTCCCAGAACCTAGAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3634649 534 - 94967081 CCCAAccggttgcagtggctcactcctgtaatcccagcactgtaggaggctgaggcaggcagatcgcttgagcccaggggttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaaagattagctgggtgtggtggtgggcgcctattaataccagctacttgggaggctgaggcacaagaatcacttgaacctgggaggcagaggttgcagtgggccgagatcgtgccactgcacaccagcctgggctacagagcaaggctctgtctc---caaaaaaaaa--aaaaaaaaaaaggaaGGGAGGAaaagaaaattaaaacattttcgtgaactcctaaaggatcatgggcccAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGGGCCCCCGAGCCCTGCCCTGTGGGGTgggagggaaggggacctgcccagtgtcacagtcggtggccaagctggac----gacaggtaatccatgagtcctgccccagccagctctgccctctgctctcccaGAACCTAGAA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74802480 522 + 80904711 CCCAACCAGTTgtggtggctcactcctgtaatcctagcactgtgggaggctgaggcaggcagatcgcttgagcccaggagtttgtgaccagcctggccaatatggtgagaccccatctctactaaaaacacgaaaattatctgggtgtgggaacgggtgcctg-taataccagctactcgggaggctgaggcacaagcatcacttgaatctgggaggcagaggttgtagtgagccgagatcacaccactgcacttcagcctgggggacagagcgaggctctgtctc----taaa-------aaaaagaaaaag--------aaaaagaaaaTTACAACATTTTTCTGGACCCCTAAAGGATCATGGGCCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCC-AGCCCTGCTCTGTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACGGTCAGTGGCCGAGCTGGACAACAGACAGGTAGTCCCTGAGTCCTGCGCCAGCCAGCCCTGCCCTCTGCGCTCCCAGAACCTAGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74611256 522 + 80997621 CCCAACCAGTTgtggtggctcactcctgtaatcctagcactgtgggaggctgaggcaggcagatcgcttgagcccaggagtttgtgaccagcctggccaatatggtgagaccccatctctactaaaaacacgaaaattatctgggtgtggtaacgggtgcctg-taataccagctactcgggaggctgaggcacaagaatcacttgaatctgggaggcagaggttgtagtgagccgagatcacaccactgcacttgagcctgggggacagagcgaggctctgtctc----aaaa-------aaaaagaaaaag--------aaaaagaaaaTTACAACATTTTTCTGGACCCCTAAAGGATCATGGGCCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGCCCCC-AGCCCTGCTCTGTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACGGTCAGTGGCCGAGCTGGACAACAGACAGGTAGTCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGCGCTCCCAGAACCTAGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68616302 529 + 74645514 CCCaaccagttgtggtggctcactcctgtaatcctagcacggtgggaggctgaggcaggcagatcgcttgagcccaggagtttgtgaccagcctggccaatatggtgagaccccatctctactaaaaacacgaaaattatctgggtgtggtaacgggtgcctg-taataccagctactcgggaggctgaggcacaagaatcacttgaatctgggaggcagaggttgtagtgagccgagatcacaccactgcacttgagcctgggggacagagcgaggctctgtctc----aaaaaaaaaagaaaaagaaaaag--------aaaaagaaaattacaacatTTTTCTGGACCCCTAAAGGATCATGGGCCCAGTGGAGAAGGTggccctcctcccttcctcagagccccc-agccctgctctgTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACAGTCAGTGGCCGAGCTGGACGACAGACAGGTAGTCCCTGAGACCTGCCCcagccagccctgccctctgcGCTCCCAGAACCTAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30669433 526 - 75148670 CTCAACCAGTTgtggtggctcactcctgtaatcctagcactgtgggaggctgaggcaggcagatcgcttgagcccgggagtttgcgaccagcctagccaacatggtgaaaccccatctctactaaaaacacaaaaattatccgggtgtggtagcgggtgcctg-taataccagctactcaggaggctgaggcacaagaatcacttgaatctgggaggcagaggttgcagtgagccgagatcacaccactgcacttgagcctggggtacagagcgagtctctgtctc----aaaaaaaaa--aaaaagaaaaag--------aaaaag-aaaTTACAACATTTTTCTGGACCCCTAAAGGATCATGGACCCAGTGGAGAAGGTGGCCCTCCTCCCTTCCTCAGAGGCCCC-AGCCCTGCTCTGTGGAGCTGGAGGGAAGAGGACCTGCCCAGTGTCACGGTCAGTGGCCTAGCTGGACGACAGTCAGGTAGTCCCTGAGTCCTGCCCCAGCCAGCCCTGCCCTCTGTGCTCCCAGAACCTAGAA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57395214 3399 - 61074082 I e calJac3.chr5 126495320 3653 + 159171411 M a score=4954560.000000 s hg38.chr17_GL383566v1_alt 18365 1765 + 90219 TCTGGGGGAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCGCCGCCTCCTCTC-ACCCCCTGCCACGGGCATCGGTGTGAGGCTGTGCTGGGGGCTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGTGTCTGGTACCTGTGGAGTTCCTGGAAGAATCTGTGCCCTGATTGCCATTGTGAGCTGTGCCGGGGAGGCTCTGTAGGAGAGGAGGA-GCAGTTAGCCGACTATTGGGGCGTGGGACAGGCTGGTCACGGGGCTCCGCTTCCTGGAGGGCTGCTGCTTTCGTAGG-CCTGGCATCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTCCCTGCAGGAGGTGCCAGCCCCTAGCTCTGGCAGCATCAGAGGAGCACATGAACCGAATGCTTCCAGAAGGCTCTGCGGCTGGTGGGGAGAAGGCTCTGGAGACCTTCAGTGAGTTGTGGCCTGTTCCCCGCTTCTCTCCGCACCGTTGGATGAGCCTCCTGTGGCATGGCTGGAAGGGCTGGGCGCTGAGGGTGTAGGCATCAGGACAGCTTTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGACAGGGGCAGCTGGCGAAGCCCTCGTGTGGTGTCTCAGTGAAGTGCCCAGTGATGGGCTAGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCCAGTTCTTCCCTCCCTCCCACCTGCTCCTGTCTCCTTCGTTTTCTGTTTCTGTCTGGGTTGACTCATGACATACCTGAGAGCCTCCTGGCTTCAGCCTCTCTGCCATCCCCAGAGCAAGGAGGGCTCGGGGGGCACACAGTGTGGGAAGAGGCTGGACGGGAAGGCCAGAGGGTCACAATGGGTGGCGGGCGCCCTCCCTGCTGCCCCGTCTCGCCCGGCTCCCAGAGTCACTCATTCGGGCTCACTCTGGGCCCTCAGCTGCTCCCTCTGATCCCAGCCTCAAAGGTGCAGCTGGTCTGGTTAGACACGTGTTCTCAGAAGGAGCAGAGAGTGATGCATTAATTTATCCTTTGTTGACTCTGAAAGTCAAAAGCTCCCGGGGAATCTGGACTAATCTCTCTCCTAGAAGTGGCTGATTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACATGGCAGTGGGACCTCCATGCAGGTCCCTGAGTGGCCATGCCGCTCTCCT-----CCCCTTCCCGCCCAGGCCAGGCCTCCAGTGCTGTGCTTCCGCTGTTTCGTCTGCCTGGGACGCTCCCGCCCCTGGAGAAGGAGAACTCAGGAAGCTCTTCCCTGAAGACATTTGTGGGGGCTTGGCcagcctcccttcctgtcccccttgtcccctgcacagacttttgtgcaacgctgcgatgatt------tattttattttttatctcttgtagtgatggggtctaaccatgttgcccaggctggtctcaaattcctaggctcaagcgatcctcccgcttcggcctcccaaaaggcacagacacaagccaccgtgcccggccCTGTGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACCGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAAGGTGGAGGTCAGAAGGGCCTCCCTTCCCCCGCGAGAAGGGCAGGTCCTACCACAGCATGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGGCTGCATTCACAGGCCAGAGC-------------ttttttttttttttttttttt s panTro4.chr17 76212677 1760 + 82630442 TCTGGGGGAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACCGCCTCTTCTC-ACCCC-TGCCACGGGCATCAGTGTGGGGCTGTGCTGGGG-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCGTCTGGTACCTGTGGAGTTCCTGGGAGAATCTGTGCCCTGATTGCCATTGTGAGCTGTGCCGGGGAGGCTCTGTAGGAGAGGAG----CGGTTAGCCGACTATTGGGGCGTGGGACGGGCTGGTCACGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCATCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTCCCTGCAGGAGGTGCCAGCCCCTAGCTCTGGTAGTGTTAGAGGAGCACATGAACCGAATGCTTCCAGAAGGCTCCGCGGCTGGTGGGGAGAAGGCTCTGGAGACCTTCAGTGGGTTGTGGCCTGTTCCCCGCTTCTCTCCGCACCGTTGGATGAGCCTCCTGTGGCACAGCTGGAAGGGCTGGGCGCTGAGGGTGTAGGCGTCAGGACAGCTTTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGACAGGGGCAGCTGGCGAAGCCCTCGTGTGTTGTCTCAGTGAGGTGCCCAGTGATGGGCTAGGGCCACCCCTGTCCTGAGCCTCCCCGTGGCCCTCCAGTTCTTCCCTCCCTCCCACCTGCTCCTGTCTCCTTCGTTTTCCGTTTCTGTCTGGGTTGACTCATGACATACCTGAGAGCCTCCTGGCTTCAGCCTCTCTGCCGTCCCCAGAGCAAGGAGGGCTCGGGGGGCACACAGTGTGGGAAGAGGCTGGACGGGAAGGCCAGAGGGTCACGATGGGTGGCGGGCGCCCTCCCTGCTGCCCCATCTCGCCCGGCTCCCAGAGTCACTCATTCAGGCTCACTCTGGGTCCTCAGCTGCTCCCTCTGATCCCAGCCTCAAAGGTGCAGCTGGTCCGGTTAGACACGTGTTCTCAGAAGGAGCAGAGAGTGATGCATTAATTTATCCTTTGTTGACTCTGAAAGTCAAAAGCTCCCGGGGAATCTGGACTAATCTCTCTCCTAGAAGCGGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCAGTGGGACCTCCATGCAGGTCCCCGAGTGGCCATGCCGCTCTCCT-----CCCCTTCCCGCCCAGGCCAGGCCTCCAGTGCTGTGCTCCTGCTGTTTCGTCTGCCTGGGACGCTCCCGCCCCTGGAGAAGGACAACTCAGGAAGCTCTTCCCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTCCTGACCCCCTTGTCCCCTGCATAGACTTTTGTGCAACGCTGCAATGATT------TATTTTattttttatcttttgtagtgatagggtctcaccatgttgccgaggctggtctcaaattcctaggctcaagcgatcctcctgcctcggcctcccaaaaggcacagacacaagccaccgtgcccggccCTGTGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACCGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCCGCGAGAAGGGCAGGTCCTACCACAGCATGGGTGGGCGCCGGGGATGTGGAAGGAAGCTGAACTGCCTCTAGTCCAGGCTTCTCAGGCTGCATTCACAGGCCAGAGC-------------ttttttttttttttttttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67310598 1763 + 73212453 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCGCCGCCTCCTCTC-ACCCCCTGCCACGGGCATTGGTGTGGGG------------CTGTGCTCACCCTCTGTGTCCCCGATGGGGCAGCATCCGGTACCTGTGGAGTTCCTGGGAGAATC--TGCCCAGGTTGCCATTGTGAGCTGTGCCAGGGAGGCTCTGTAGGAGAGGAGGA-GCGGTTAGCCGACTGCTGGGGCATGGGACGGGCTGGTCACAGGGCTCAGCTTCCTGGAGGGCTGCCACTTTCTTAGGCCCTGGCACCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTCCCTGCGGGAGGTGCCAGCGCCTAGCTCTGGCAGCATCAGAGGAGCACATGAACCGAATGCTTACAGAAGGCTCCGCGGCTGGTGGGGAGAAGGCTCTGGAGACCTTCAGTGAGTTGTGGCCTGTTCCCCGCTTCTCTCTGCACCATTCGATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAGCTTTGCCTAGGCTGCCCACATTCTCTGCCCTGGGGGGACAGGGGCAGCTGGCGAAGCCCTCGTGTGGTGTCTCAGTGAGGTGCCCAGTGATGGGCTAGGGCCACCCCTGTCCTGAGCCTCCCCATCGCCCTCCAGTTCTTCCCTCCCTCCCACCTGCTCCTGTCTCCTTCATTTTCCGTTTCTGTCTGGGTTGACTCATGACATACCTGAGAGCCTCCTGGCTTCAGCCTCCCTGCCGTCCCCAGAGCAAGGAGGGCTCGGGGGGCACACAGTGTGGGAAGAGCCTGGACGGGAAGGCCAGAGGGTCTTTATGGGTGGCAGGCGCCCTCCCTGCTGCCCCGTCTTGCCCGGCTCCCAGAGTCACTCATTCGGGCTCACTCTGGGTCCTCAGCTGCTCCCTCTGATCCCAGCCTCAAATGTGCAGCCGGTCCGGTTAGACACGTGTTCTCCGAAGGAGCAGAGAGTGGTGCATTAATTTATCCTTTGTTGACTCTCAAAGTCTAAAGCTCCCAGGGAATCTGGACTAATCTCTCTCCTAGAAGCAGCTGGATATTTGTAAAAGGATCTGAGCTTGCTGCGTA-------------TCGCCTGGCAGTGGGAGCTCCATGCAGGTCCCTGGGTGGCCATGCCGCTCTCCT-----CCCCTCCCCGCCCAGGCCAGGCCTCCAGCGCTGTGCTCCTGCCATTTCCTCTGCCTGGGACACTCCCGCCCCTCAAGAAGGAGAACTCAGGAAGCTCTTCCCTGAAGACATTTGTAGGGGCTTGGCCAGCCTCCCTTCGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACACTGTGATGAtt------tattttattttttatcttttgtagtgatagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagcaatcctcacgcctcggcctcccaaaaggcacaggcacaagccaccgcgcccggcCCCGTGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACCGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCACCAGCGAGAAGGGCAGGTCCTGCTACAGCATGGGTGGGTGCCTGGGATGCGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGGCTGCATTCACAGGCCAGAGCGtttctttttt--tttcttttttttttttttttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3635183 1761 - 94967081 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACCGCCTCCTTTCAACCCCCTGCCACGGGCTTCGGTGTGGGG------------CTGTGCTCACCTTCTGCGTCCCCAATGGGGCAGCATCTGGTACCCATGGAGTTGCCAGGAGAATC--TGCCCAGATTGCCACTGTGAGCTGTGCCGGGGAGGCTCTATAGGAGAGGAGGA-GCGGTTAGCCGACTGTTGGGGCATGGGACGGGCTGGTCACCGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCAGCCGCATGCTGTCTGATTG-TTTCCTGCGGGAGGTGCCAGCCCCTAGCTCTGGCAGCATCAGAGGAGCACACAAACCGAATGCTTCCAGAAGGCTCCACGGCTGGTGGGGAGAAGGCTCTGGAGACTTTCAGTGAATTGTGGCCTGTTCCCCGCTTCTCTCCGCACCGTTCAATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGCGCTGAGGGTGTAGGCATCAGGACAGCTTTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGCCAGGGGCAGCTGGTGAAGCCCTCATGTGGTGTCTCAGTGAGGTGCCCACTGATGGGCTAGGGCCACCCCAGTCCTGAGCCTCCCCACGGCCCTCCAGTTCTTCCCTCCCTCCCACCTGCTCCTGTCTCCTTCGTTTCCCGTTTCTGTCTGGGTTGACTCATGACATACCTGAGAGCCTCCTGGCTTCAGCCTCCCTGCCGTCCCCAGAGCAAGGAGGGCTCGGGGGGCATAGAGTGTGGGAAGGGGCTGGACGGGAAGGCCAGAGGGTCATGACGGGTGGCGGGTGCCCTCCTTGCTGCCCCGTCTCGCCCGGCTCCCAGAGTCGCTCATTTAGGCTCTCTCTGGGTCCTCAGCTGCTCCCTGTGATCCCAGCCTCAAAGGTGCAGCTGGTCCGGTTAGACATGCGTTCTCCGAAGGAGCAGAGAGTGATGCATTAATTTATCCTTTGTTGACTCTGAAAGTCTAAAGCTCCCAGGGAAGCTGGACTAATCTCTCTCCTAGAAGTGGCTGGATATTTGTAAAACGATCTGAGCTTGCTGAGTG-------------TCACCTAGCAGTGGGAGCTCCATGCAGGTCCCTGGGTGGCCGTGCCGCTCTCCT-----CCCCTTCCCGCCCAGGCCA-GCCTCCAGTGCTGTGCTCCTGCTGTTTCCTTTGCCTGGGACGCTCCCGCCCCTCTAGAAG---AACTCAGGAAGCTCTTCCCTGAAGACGTTTGCAGGGACTTGGCCAGCCTCCCTTCGTGTCCCCCTTGTTCCCTGCACAGACTTTTGTGCAACGCTGTGATGAtt------tattttattttttatctttcgtagtgatagggtctcaccatgttgcccaggctggtctcaaactcctaggctcaagcgatcctcccgcctcggcctcccaaaaggcacaggcacaaggcaccgtgcccggccCCATGATGTTCATGGAACTGACTTGTCCCACGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGCCCTCGAGCTGTGCTGGACACACAGAAGGTGCTGGTGCA-TGGAGGGTGGAGATCAGAAGGGCCTCCCTTCACCAGTGAGAAGGGCAGGTCCTGCTACAGTGTGGGTGGGTGCCTGGGACGCAGAAGGAAGCTGAACTGCTTCTAGTCCTGGCTTCTCAGGCTGCATTCACAGGCCAGAGCGTTTCtttttttctttctttttttttttttttgt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74803002 1748 + 80904711 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACTGCCTCCGCTC-ACCCCCTGCCGCAGGCGTCGGTGTGGGGCTGTGCTGGGT-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAGAGTC--TGCCCGGATTGCCACTGTGAGCTGTGCCAAGGAGGCTCTGGAGGAGAGGAGGA-GAGGTGAGCCGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCGGCCGCATGCTGTC----TGTTTCCCTGCGGGAGGTGCCAGC-GCTAGCTCTGGCGGCATCAGAGGAGCACATGGACCAAATGCTTCCAGAAGGCTCCGCGGCTGGTCGGGAGACGCCTCTGGAGATCTTCAGTGAGTCGTGGCCTGTTCCTCGCTTCTCTCCGCACCGTTCGAAGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAGCTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGAGACAGGGGCGGCTAGCGAAGCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGATGGGCTGGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCCAGGTCTTCCCTCCTTCCCACCTGCTCCTTTCTCCTTCGTTTTCCGTTTCTGCCCAGGTTGACTCATGACATACCTGAGAGCCTCCTGGCTTCAGCCTTCCTGCCGTCCCCAGAGTAAGGAGAGCTT-AGGGGCACACAGTGCTGGAAGAGGCTGGACGGGAAGGCCAGA-GGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCCGGAGTCGCTCATTCGGGATCACTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGCCTCAAAGGTGCGGCCGGTGCGGTTAGACATGTGTTCTCCGAAAGAGTAGGGAGTGATGCATTCATTTATCCTTTGTTGACTCTGAAAGTCTAAAGCTCCCAGGGAATCTGGACTAATCTCTCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCCGTGGGAGCTCCATGCAGGTCCCTGGCTGACCATGCCGctctcctccccacccctcccctccccacccAGGCCGCCAGCGCTGTGCTCCTGCTGTTTCCTCTGCCTGGGACGCTCCCGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTTCTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACGCTGTGATGATT------TGTTTTattttttatcttttgtagtgaaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagtgatcctcccgcctcggcctcccaaaAGG-------------CACAGTGCCCGGTCCTGTGATGTTCACGGAACTGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGACACAGAGCAGGTGCTGGTGCATTGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCATGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGTCTGCATTCACAGGCCAGAGT-------------Atttcttttcttttctttttt i rheMac3.chr16 C 0 I 241 s macFas5.chr16 74611778 1748 + 80997621 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAGGGCACTGCCTCCGCTC-ACCCCCTGCCGCTGGCGTCGGTGTGGGGCTGTGCTGGGT-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAGAGTC--TGCCCGGATTGCCACTGTGAGCTGTGCCAGGGAGGCTCTGGAGGAGAGGAGGA-GAGGTGAGCCGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCGGCCGCATGCTGTC----TGTTTCCCTGCGGGAGGTGCCAGC-GCTAGCTCTGGCGGCATCAGAGGAGCACATAGACCAAATGCTTCCAGAAGGCTCCGCGGCTGGTCGGGAGACGCCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTCCTCGCTTCTCTCCGCACCGTTCGAAGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAGCTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGAGAGACAGGGGCGGCTAGCGAAGCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGATGGGCTGGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCCAGGTCTTCCCTCCTTCCCACCTGCTCCTTTCTCCTTCGTTTTCCGTTTCTGCCCAGGTTGACTCATGACATACCTGAGAGCCTCCTGGCTTCAGCCTTCCTGCCGTCCCCAGAGTAAGGAGAGCTC-AGGGGCACACAGTGCTGGAAGAGGCTGGACGGGAAGGCCAGA-GGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCCGGAGTCGCTCATTCGGGATCACTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGCCTCAAAGGTGCGGCCGGTGCGGTTAGACATGTGTTCTCCGAAAGAGTAGGGAGTGATGCATTCATTTATCCTTTGTTGACTCTGAAAGTCTAAAGCTCCCAGGGAATCTGGACTAATCTCTCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCCGTGGGAGCTCCATGCAGGTCCCTGGCTGACCATGccgctctcctccccacccctcccctccccacccAGGCCGCCAGCGCTGTGCTCCTGCTGTTTCCTCTGCCTGGGACGCTCCCGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTTCTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACGCTGTGATGATT------TGTTTTattttttatcttttgtagtgaaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagtgatcctcccgcctcggcctcccaaaAGG-------------CACAGTGCCCGGTCCTGTGATGTTCACGGAACTGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGACACAGAGCAGGTGCTGGTGCATTGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCAGGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGTCTGCATTCACAGGCCAGAGT-------------ATTTCttttcttttcttttct i macFas5.chr16 C 0 I 13 s papAnu2.chr16 68616831 1758 + 74645514 TCTGGGGAAAGATTGAACAAGCTCTTCCTTGAAGGGAAGGCACTGCCTCCGCTC-ACCTCCTGCCACGGGCGTCGGTGTGGGGCTGTGCTGGGT-CTGTGCTCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAAAGTC--TGCCCGGATTGCCACTGTGAGCTGTGCCGGGGAGGCtctggaggagaggagga-gaggtgaGCCGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCGCTTTCTTAGG-CCTGGCACCCGCCCCTCCGGCCGCATGCTGTC----TGTTTCCCTGCGGGAGGTGCCAGC-CCTAGCTCTGGTGGCATCAGAGGAGCACATGGACCAAATGCTTCCAGAAGGCTCCGCGGCTGGTCGGGAGACACCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTCCTCGCTTCTCTCCGCACCGTTCAATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGAGGGTGTAGGCATCAGGACAGCTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGAGACCGGGGCGGCTAGCAAAGCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGATGGGCTGGGGCCACCCCTGTCCTGAGCCTCCCCATGGCCCTCCAggtcttccctccctcccacctgctCCCTTCTCCTTCGTTTTCCGTTTCTGCCCGGGTTGACTCATGACATACCTGAGAGCCTCCTGGCTTCAGCCTTCCTGCCGTCCCCAGAGTAAGGAGGGCGT-GGGGGCACACAGTGCTGGAAGAGGCTGGACGGGAAGGCCAGAGGGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCTGGAGTCGTTCATTCAGGATCACTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGCCTCAAAGGTGCGGCCGGTGCGGTTAGACATGTGTTCTCCGAAAGAGTAGAGAGTGATGCATTCATTTATCCTTTGTTGACTCTGATAGTCTAAAGCTCCCAGGGAATCTGGGCTAATCTCTCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCCGTGGGAGCTCCATGCAGGTCCCTGGCTGACCATGCcgctctcctcccctcccctcccctccctaccCAGGCCGCCAGCGCTGTGCtcctgctgtttcctctgcctgggacGCTCCTGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTTCTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACGCcg---tgatt------tgttttattttttatcttttgtagtgaaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcaagcgatcctcccgcctcggcctaccaaaaggcacaggcacaagccacagtGCCCGGTCCTGTGATGTTCACGGAACTGACTTGTCCCAGGTctgtctccttctccttcctaccTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGacacagagcaggtgctggtgcA-TGGAGGGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCATGGGTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTTCAGGCTTCTCAGTCTGCATTCACAGGCCagagc-------------atttcttttcttttctttttt i papAnu2.chr16 C 0 I 13 s chlSab2.chr16 30669959 1758 - 75148670 TCTGGGGAAAGACTGAACAAGCTCTTCCTTGAAGGGAGGACACTGCCTCCGCTC-ACCCCCTGCCACGGGCGTCGGTGTGGGACTGTGCTGGGT-CTGTGCGCACCCTCTGCGTCCCCGATGGGGCAGCATCTGGCAGCTGTGGCGTTCCCGGGAGAGTC--TGCCCGGATTGCCACTGTGAGCTCTGCCAGGGAGGCTCTGGAGGAGAGGAGGA-GACGTGAGCTGGCTGTT-GGGCATGGGCCGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCCACTTTCTTAGG-CCTGGCACCCGTCCCTCCGGCCGCATGCTGTCTGATTGTTTCCCTGCGGGAGGTGCCAGC-CCTAGCTCTGGCGGCATCAGAGGAGCACATGGACCCAATGCTTCCAGAAGGCTCTGCGGCTGGTCGGGAGACGCCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTCCCCGCTTCTCTCCACACCGTTGGATGAGCCTCCTGTGGCATAGCTGGAAGGGCTGGGTGCTGGCGGTGTAGGCGTCAGGACAGCTCTGCCTGGGCTGCCCACATTCTCTGCCCTGGGGGGACA-GGGCGGCTAGCGAAGCCCTCGTGTGATGTCTCAGTGAGGTGCCCAGTGATGGGCTGGGACCACCCCTGTCCTGAGCCTCCCCATGGCCCTCCAGGTCTTCCCTCCCTCCCACCTGCTCCTTTCTCCTTCATTTTCCGTTTCTGCCCGGGTTGACTCATGACATACCTGAGAGTCTCCTGGCTTCAGCCTTCTGGCCGTCCCCAGAGTAAGGAGGGCTC-GGGGGCACACAGTGCGGGAAGAGGCTGGACGGGAAGGCCAGAGGGTCATGATGGATGGCGGCCACCCTCCCTGCTGCCCCGTCTCACCCAGCTCCTGGAGTCGCTCATTCGGGATCGTTCTGGGTCCTCAGCTGCTCCATCTGATCTCAGTCTCAAAGGTGCGGCCGGTGCAGTTAGACATGTGTTCTCCGAAAGAGTAGAGAGTGATGCATTCATTTATCCTTTGTTGACTCTGAAAGTCTAAAGCTCCCAGGGAATCTGGGCTAATCTCTCTCCTAGAAGCAGCTGGTTATTTGTAAAAGGATCTGAGCTTGCTGAGTG-------------TCACCTGGCTGTGGGAGCTCCATGCAGGTCCCTGGC-GACCACGCCGCTGTCCT-----CCCCTCCCATCCCCACCCAGGCCGCCAGCGCTATGCTCCTGCTGTTTCCTCTGCCTGGGATGCTCCCGCCCCTCGAGAAGGAGAACTCAGGAAGCTCTTCTCTGAAGACATTTGTGGGGGCTTGGCCAGCCTCCCTTTGTGTCCCCCTTGTCCCCTGCACAGACTTTTGTGCAACACCGTGATGATT------TGTTTTattttttatcttttgtagtgcaagggtctcaccatgttgcccaggctggtctcaaattcctaggctcgagcgatcctcccgcctcggcctcccaaaaggcacaggcacaagccacagtgcccggtcCTGTGACGTTCACAGAACTGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTG----TGACTGGGTCCTCAAGGTGCGCTGGACACAGAGAAGGTGCTGGTGCG-TGGAGTGTGGAGGTCAGAAGGGCCTCCCTTCCCCAGTGAGAAGGACAGGTCCTGCCACAGCATGGCTGGGCGCCTGGGATGTGGAAGGAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGTCTGCATTCACAGGCCAGAGC-------------Atttcttttctttctttcttt i chlSab2.chr16 C 0 I 10 s calJac3.chr5 126499086 1732 + 159171411 tctgggtgAACAA-GAATAAGCTCTTCCTTAAAGGGAGGGTGCCACCTCCT-TG-AGCCCCTGCTATGGG-GTCGGTGTGGAGTGGTGCTTGGG-CTGTGCTCACCCTCTGCGTCCCTGATGGGGCAGAATCTGGCACCTGTGGAGTTCCCAGGAGGATCTGTGCCTGGA-TGCCATCGTGAGCTGTGCC-TGGAGGCTCTGTAGGAGAGGAGGAGGTGGTTTCCTGACTGTCGGAGTGTGGGACGGGCTGGTCATGGGGCTCAGCTTCCTGGAGGGCTGCTGCTTTCTTAGG-CCTGGCACCTGCCCCTCCAGACACAGGCTGTCTGATTG---CTCTGCAGGAGGTGCCAACCCCTAGTTCCGGCAGCATCAGAGGAGCACATGGACTGAATGCTTCCAGAAGGCTCCACCGCTGGTGGGGAGAAGCCTCTGGAGACCTTCAGTGAGTCGTGGCCTGTTTCCCGCTTCTCTCCCCACCGCTTGATGAGCCTCCCGTGGCATAGCTGGAAGGATTGGGCGCTGAGGGTGTCAGCGTCAGGTCAGCCCTGCCTGGGCTGCTCACATTCTCTGCCCTGGGGGGG-ACGGGCGCCTGACAAAGCCCTTGTGTA--GTCTCAGTGAGGTGCCCGGTGATGGGCTCAGGCCAGTCCTGT-CTGAGCTGCCCCATGGCCATCCAGGTCTTCCCTC--TGCCCGCTGCTC---------TTGTTTTACGTTTCTGCCCAGGTTGACTC-TGGCATACCTGACAACCTCCTGGCTTTAGCCTCCCTGCCGCTCCCAGAGAAAGGAGGGCTCAGGGGGCCCACAGTGTAGGAAGTGGCTGGATGGGAAGGCCAGAGGGTCATGATGGGTGGTGGGCACCCTCCCTGCTGCCCAGTCTCACTTGGCCCCTGGAGTCACTCATTCGGGCTCACTCTGTGTCCTCAGCGGCTCCCTCTCATCCCAGCCTCAGAGGTGCAGCTGGTCCGGGCAGGCACGTGTTCTCTGAAGGAGCA--GAGTGATGCATTCATTTATTCTTTGTTGATTCTGAAAGTCTAAAGCTCCCAGGGAATCTGGACTAATCTCTTTCCTAGAAGTGCCTGGTTATTTGCAAAAGGATCTGAGCTTGCTGAGTGGGAGCTCCACACCTCACCTC-CAGTGGGAGCTCCACACCTCACCTCCAGTGG-------GAGCTCCA-----CACCTC--------------ACCTCCAGCGCTCTGCTTCTGCTGTTTCCTCTGCCTGGGATGCTCCAGCCCCTCGAGGAG---AACTCGGGAAGCTTGACTGTGAAGACATTTGTCAGGGCTTGGCCAGCATCCATTCGTGTCCCACTTGT-CCCTGCACAGACTTTTGTGCAATGCTATGAGATTTATtttatattttattttttatcttttatagtaatggggtctcaccatgttgaccaggctggtctcaaattcctgggctcaagcgatcctcttgcctcagcctaccaaaaggcacaggcacaaggcaccttgcctggccCCGTGATGTTCATGGAACCGACTTGTCCCAGGTCTGTCTCCTTCTCCTTCCTACCTCTGTGTGACTGACTGAGCCCTTGAGCTGCGCTGGACACTCAGAAGGTGCTGGTGTG-TGGAGGGTGG---TCAGAAGGGCCTCCCTCCTCCAGGGAGAAGG-CAGGGCCTGCCACGGCATGGGTGGGCGCCTGGGACGTGGAAGCAAGCTGAACTGCTTCTAGTCCAGGCTTCTCAGGCTGCATTCACGGGCCAGAGC-------------Atttcttttctttttttttc- i calJac3.chr5 M 3653 C 0 e canFam3.chr9 57395214 3399 - 61074082 I a score=536265.000000 s hg38.chr17_GL383566v1_alt 20130 242 + 90219 gagacagagtctctacctgtctcgcccaggctggagtgcaatggcgcagtcttggctcactgcagcctccgcttcctgggttcaagcgattctcctatctcagcttcccgagtagctgagactacaggcatgtgccaccacgctcggctaattttgtatttttag-tagagacgggg-tttcaccatgttggccaggctggtctcgaactccggacctcaggtgatccactggccttggcct-ct- s panTro4.chr17 76214437 242 + 82630442 gagacagagtctctacctgtctcgcccaggctggagtgcaatggcgcagtcttggctcactgcagcctccgcttcctgggttcaagcgattctcctatctcagcttcccgagtagctgagactgcaggcatgtgccaccacgctcggctaattttgtatttttag-tagagacgggg-tttcaccatgttggccaggctggtctcgaactccggacctcaggtgatcccctggccttggcct-ct- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312361 243 + 73212453 gagacagagtctctacctgtctcgcccaggctggagtgcaatggcgcagtcttggctcactgcagcctctgcctcctgggttcaagcgattctcctatctcagcttcccaagtagctgggactgcaggcatgcgccaccacgcccggctaattttgtatttttag-tagagacaggg-tttcaccatgttggccaggctggtctcaaacccctgacctcaggtgatccactcgccttggcctccc- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3636944 242 - 94967081 gagacagagtctctaccggtctcgcccaggctggagtgcaatggcgtgatcttggctcactgcagcctccacctcctgggttcaagcgattctcctatctcagcttcctgagtagctgggactgcaggcatgtgccaccacgcctggctgattttgtatttttag-taaagacaggg-tttcaccatgttggccaggctggtctcaaactcctgacctca-gtgatccactcaccttagcctccc- i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74613539 240 + 80997621 tggacagcgtctctacctgtctcgcccaggctggagtgcaatggtgcgatcttggctcactgcagcctctgcctcctgggttcaagcaattctcctatctc--cttcctgagtacctgggactgcaggcgtgtgccaccacgcctggctaattttgtatttttag-tagagacgggg-tttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgccttggcct-cc- i macFas5.chr16 I 13 I 1 s papAnu2.chr16 68618602 240 + 74645514 tagacagagtctctacctgtctcgcccaggctggagtgcaatggtgcgatcttggctcactgcagcctccgcctcctgggttcaagcaattctcctatctc--cttcctgagtacctgggactgcaggcatgtgccaccacgcctggctaattttgtatttttag-tcgagacgggg-tttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccactcgccttggcct-cc- i papAnu2.chr16 I 13 I 1 s chlSab2.chr16 30671727 240 - 75148670 aagacagagtctctacctgtctagcccaggctggagtgcaatggtacgatcttggctcactgcagcctccgcctcctgggttcaagcaattctcctatctc--cttcctgagtacctgggactgcaggcatgtgccaccacgcctggctaattttgtatttttag-tagagacgggg-tttcaccatattggccaggctggtctcgaactcctgacctcaggtgatccactcgccttggcct-cc- i chlSab2.chr16 I 10 I 1 s calJac3.chr5 126500818 243 + 159171411 -agatggagtctcaatctgtctctcccaggatggagtgcagtggcacaatcttggctcactgcagcctcctcctcctgggttcaagcgattctcctgtcttagcttcctgagtagctgggattacaggcatgcaccaccgtgtccggctaattttgtatttttaattagagttggggagttcaccatgttagccagga-ggtcttgaactcctgacctcaggtgatccactcacctgggtct-ccc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57395214 3399 - 61074082 I e rheMac3.chr16 74804750 241 + 80904711 I a score=195621.000000 s hg38.chr17_GL383566v1_alt 20372 67 + 90219 aaagtgccgagattacaggtgtgaggcaccgcacccagccCTCCCGCAGTTCTGATTGGATAACCCA s panTro4.chr17 76214679 67 + 82630442 aaagtgctgagattacaggtgtgaggcaccgcgcccggccCTCCCGCAGTTCTGATTGGATAACCCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312604 67 + 73212453 aaagtgctgagattacagatgtgagccaccgcgcccggccCTCCTGCAGTTCTGATTGGATAACCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3637186 67 - 94967081 aaagtgctgggattacagacgtgagccaccgtgcccggccCTCCCGCGGTTCTGATTGGATAACCCA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74804991 67 + 80904711 aaagtgctgggattacaggtgtgaaccaccgcgcccggccCTCCCGCAGTTCTGATTGAACAACCCA i rheMac3.chr16 I 241 C 0 s macFas5.chr16 74613780 67 + 80997621 aaagtgctgggattacaggcgtgaaccaccgcgcccggccCTCCCGCAGTTCTGATTGAACAACCCA i macFas5.chr16 I 1 C 0 s papAnu2.chr16 68618843 67 + 74645514 aaagtgctgggattacaggcgtgagccaccgcgcccggccctcccgCAGTTCTGATTGAACAAACCA i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 30671968 67 - 75148670 aaagtgctgggattacaggcgtgagccaccgcgcccggccCTCCCGCAGTTCTGATTGAACAACCCA i chlSab2.chr16 I 1 C 0 s calJac3.chr5 126501061 66 + 159171411 aaagtgctgggattacaggtgtgagccactggg-cAAGCCCTCCTACAGTTCTGATTAGACAACCCA i calJac3.chr5 C 0 C 0 e canFam3.chr9 57395214 3399 - 61074082 I a score=493924.000000 s hg38.chr17_GL383566v1_alt 20439 205 + 90219 GCCCAGGAGTGCCCCGgagccctccctctggccgtatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagggtcagtcctactgtccccactgcacagatggggaaactgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtccggccccag s panTro4.chr17 76214746 205 + 82630442 GCCCAGGAGTGCCCCGgagccctccctctggccgtatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagggtcagtcctactgtccccactgcacagatggagaaactgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtccggccccag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312671 190 + 73212453 GCCCAGGAGAGCCCTGGAGCCCTCCTTCTGGCCatatgctgagctcagtgcctca---------------tccccacccatccctgcagggtcagtcttactgtccccactgcacagatggggaaaccgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtccggacccaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3637253 205 - 94967081 GCCCAGGAGTGCCCCGgagccctccttctggccatgtgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagggtcagtcctactgtccccactgcacagatggggaaactgaggctcagaggggttggggaaatttgcccacagtttcagccaacaaaatggagaacaggatccagtctggccccaa i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74805058 204 + 80904711 ACCCAGGAGTG-CCCGgagccctccccctggccatatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagagtcagtcctactgttcccactgcacagatgggaaaactgaggcttggaggggttggggaaatttacccacagtttcagccaacaaaatggagaacaggatccagtctggccccac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74613847 204 + 80997621 ACCCAGGAGTG-CCCGgagccctccctctggccatatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagagtcagtcctactgttcccactgcacagatgggaaaactgaggcttggaggggttggggaaatttacccacagtttcagccaacaaaatggagaacaggatccagtctggccccac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68618910 205 + 74645514 GTCCAGGAGTGCCCCGGAGCCCTCCCTCTGGCCATATGCTGAGCTCAGTGCCTCACCCCCACCATTTTAGTCCCCACCCATCCCTGCAGAGTCAGTCCTACTGTCCCCACtgcacagatgggaaaactgaggctcagaggggttggGGAAATTTACCCACAGTTTCAGCCAACAAAATGGAGAACAGGATCCAGTCTGGCCCCAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30672035 205 - 75148670 GTGCAGGAGTGCCCCGgagccctccctctggccatatgctgagctcagtgcctcacccccaccattttagtccccacccatccctgcagagtcagtcctaccgtccccactgcacagatgggaaaactgagcctcggaggggttggggaaatttacccacagtttcagtcaacaaaatggagaacaggatccagtctggccccac i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57395214 3399 - 61074082 I e calJac3.chr5 126501127 0 + 159171411 C a score=1648435.000000 s hg38.chr17_GL383566v1_alt 20644 604 + 90219 gccctgctctgctgacctctgttttatCTTCCCACCCGGGACCCAGAGGATGGGGTGCTCCTCAGGACTCGCCACAGAGCCCGACCGGAGGACTGGGAATGTGCCCACAGCTGGGACAAGGAACCAGCCAGCAGCATTCCTGGCAGGC----CCATCCCAGCCAGGTGAGGCCCCAGCTCCTCTTGGCTTCTCCCACTGTGGGTACGGGGACGTGACAGCAAATAGACTG-TCCAATTTCCCTGCCCTCGCGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGATGGCTGCTTCTGGGAGACACAGCAGGGAAGCGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCGTCGGCCTCTCCCCTACATGCTCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAGTGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATTCTTTTGCCTGCTGGCCACAGCGGGAAGCAGCAGATGCTGCCCGGGCCGGCCTGTGGGGACGGCACCCTGCCTCTGGAAGGCTCGGTGATGCTGCGGCCAGCCGGTGTCCACCAGGCCTGTGCCAGGTGAGATGGGCCTTCACGGTGGCCTGGCTCC----GT s panTro4.chr17 76214951 604 + 82630442 gccctgctctgctgacctctgttttatCTTCCCACCCAGGACCCAGAGGATGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCAACCGGAGGACTGGGAATGTGCCCACAGCTGGGACAAGGAACCAGCTGGCAGCATTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCAGCTCCTCTCGGCTTCTCCCACTGTGGGTACGGGGACATGACAGCAAATAGACCG-TCCAATTTCCCTGCCTTCGTGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGATGGCTGCTTCTGGGAGACACAGCAGGGAAGCGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCTTCGGCCTCTCCCCTACATGCTCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAGTGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATTCTTTTGCCTGCTGGCCACAGCGGGAAGCAGCAGATGCTGCCCGGGCCGGCCTGTGGGGACGGCACCCTGCCTCTGGAAGGCTCGGTGGTGCTGCGGCCAGCTGGTGTCCACCAGGCCTGTGCCAGGTGAGATGGGCCTTCACGGTGGCCTGGCTCC----GT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67312861 608 + 73212453 gccctgctctgctgacctctgttttatCTTCCCCTCCAGGACCCAGAGGATGGGGCGCTCCTCAGGGCCCGCCACAGAGCCCGACCAGAGGACTGGAAATGTGCCCACAGCTGGGACAAGGAACCAGCCGGCAGCCTTCCTGGCAGGCCCATCCATCCCAGACAGGCCAGGCCCCAGCTCCTCTCGGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACTGTTCCAATTTCCCTGCCCTCGTGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGATGGCTGCTCCTGGGAGACACAGCAGGGAAGCGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCATCGGCCTCTCCCCTACATGCCTGTGCCTGCCCCAAAGCCCTCAGTGTCTCAGTGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATT-GTTTGCCTGCTGGCCACAGCGGGAAGCAGCAGATGCTGCCCGGGCCGGCCTGTGGGGATGGCACCCTGCCTCTGGAAGGCTCCGTGGTGCTGCGGCCAGCCGGTGTCCACCAGGCCTGTGCTGGGTGAGATGGGCCTTCACGGTGGCCTGGCTCC----GT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3637458 577 - 94967081 gccctgctctGCTGACCTCTGTTTTATCTTCCCACCTG--------------------------GGGCCCGCCACAGAGCCCGACCGGAGGACGGGGAATATGCCCACAGCTGGGACAAGGAACCAGCCGGCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCAGCTCTTCTCGGCTTCTCCCACTGCGGGTATGGGGACATGACAGCAAATAGACCA-TCCAATTTCCCTGCCCTCGTGCAGTAAGATGGAGAGGAACGTTCTGGAGCAGACAGTGACGGCTGCTCCTGGGAGACACAGCAAGGAAGAGGTGAGCCATGCA-GAGAGTCGGGGGATTGGCGTCGGCCTCTCCCCTGCATGCCCCTGCCTGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGAACTTTCTCTCCCTTCCTGGGACTCAGGGAGGGATT-CTTTGCCTGCTGGCCAGAGGAGGAAACAGCAGATGCTGCCCGGGCCGGCCTGTGGGGACGGCACCCTGCCTCTGGAAGGCTCAGTGGTGCTGTGGCCAGCCGGTGTCCACCAGGCCTGTGCCAGGTGAGATAGGCCTTCACGGTGGCCTGGCCCC----AC i nomLeu3.chr14 C 0 I 2 s rheMac3.chr16 74805262 601 + 80904711 gccctgctctgctgacctctattttatCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCGACCGGAGGACGGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCA-GCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACCG-TCCAATTTCCCTGCCCTCATGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGATAGTGACAGTTGCTCCTGGGAGACACAGTAGGGAAGCGCTGAGACGTGCAGGGGAGTCGGGGAATTGGCGTCAGCCTCTCCCCTGCATGCCCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATT-CTTT-CATGCTGGCCAGAGC-GGAAACAGCAGATGCTGCCTGGGCCGGCCTATGGAGACGGCACCCCGCCTCTGGAAGGCTCGGTGGTGCTGTGGCCAGCCGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTTCAC---- i rheMac3.chr16 C 0 I 22 s macFas5.chr16 74614051 599 + 80997621 gccctgctctgctgacctctattttatCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCGACCGGAGGACGGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCA-GCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACCG-TCCAATTTCCCTGCCCTCATGGAGTAAGATGGAGAGGAACGTTCTGGAGCAGATAGTGACAGCTGCTCCTGGGAGACACAGTAGGGAAGCGCTGAGACGTGCAGGGGAGTCGGGGAATTGGCGTCAGCCACTCCCCTGCATGCCCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGGACTTTCCCTCCCTTCCTGGGACTCAGGGAGGGATT-CTTT-CATGCTGGCCAGAGC-GGAAACAGCAGATGCTGCCCGTGCCGGCCTATGGAGACGGCACCCCGCCTCTGGAAGGCTCGGTGGTGCTGTGGCCAGCCGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTCC------ i macFas5.chr16 C 0 I 4 s papAnu2.chr16 68619115 599 + 74645514 GCCCTGCTCTGCTGACCTCTATTTTATCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCTGCCACAGAGCCCGACCGAAGGACTGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCT-GCAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACTG-TCCAATTTCCCTGCCCTTATGGAGTAAGATGGAGAGGAACGTTCCGGAGCAGACAGTGACGGCTGCTCCTGGGAGACACAGTAGGGAAGCGGTGAGCCGTGCAGGGGAGTCGGGGAATTGGCGTCGGCCTCTCCCCTGCATGCCCCTGCCCGCCCCAAAGCCCTCAGTGTCTCAATGCTAGTCTGgactttccctcccttcctgggACTCAGGGAGGGATG-CTTT-CGTGCTGGCCAGAGC-GGAAACAGCACATGCTGCCCGGGCCGGCCTATGGGGACGGCACCTCGCCTCTGGAAGGCTCGGGGGTGCTGTGGCCAGCCGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTCC------ i papAnu2.chr16 C 0 I 4 s chlSab2.chr16 30672240 600 - 75148670 gccctgctctgctgacctctattttatCTTCCCACCCGGGGCCCAGAGGTTGGGGTGCTCCTCAGGGCCCGCCACAGAGCCCGACCGGAGGATGGGGAACGTGCCCACAGCTGGGACAGGGAACCAGCC-ACAGCCTTCCTGGCAGGC----CCATCCCAGCCAGGCGAGGCCCCGGCTCCTCTCAGCTTCTCCCACTGCGGGTACGGGGACATGACAGCAAATAGACCA-TCCAATTTCCCTGCCCTCATGGAGT-AGATGGAGAGGAACGTTCTGGAGCAGACAGTGACGGCTGCTCCTGGGAGACACAGTAGGGAAGCGGTGAGACGTGCAGGGGGGTCGGGGAATTGGTGTTGGCCTCTCCCCTGCATGCCCCTGCCTGCCCCAAAGCCCTCAGAGTCTCAATGCTAGTCTGGACTTTCCTTCCCTTCCTGGGACTCAGGGAGGGATT-CTTT-CGTGGTGGCCAGAGC-GGAAACAGCAGATGCTGCCCGGGCCGGCCTATGGGGACGGCACCCCGCCTCTGGAAGGCTCGGTGGTGCTGTGGCCAGCTGGTGTTCACCAGGCCTCTGCCAGGTGAGATGGGCCTTCATGGTGGTCTGGCTCC--AC-- i chlSab2.chr16 C 0 I 22 s calJac3.chr5 126501127 552 + 159171411 GCCCTGCTTGGCTGACC------TTATCTTCCCACCTGGGGCCCAGAGGATGGGGTGCTCT-----------------GCTGGACCGCAGGACTGGGGATGTGCCCACAGCTGGGACAAGGAACCAGCCAGCAGCCTCCCTGGCAGGC----CCATCCCAGCCAGCAGAGACCACAGCTCCTCTCAGCTGTTCCCACGGTGGGCATGGGGATATGACAGCGAATCAA----TCCAGTTTCCCTGCCCTTGTGGAGCAAGATGGAG-GGAACAACCTGCTGCAGTCGCT----CCTGCTCCTGGGAGACACAGCAGGGAAGCAGTAAGCCATGTAGGAGAGTTGGGG-ATTGACGTCTGCTTCTCCCCTGTGTGC-CCTCCCTGCCCC-AAGCTGTCAGTGTCTCAGTGCTAGTCCGGACCTTCCCTCCCTTCCTGGGGCTCAGGGAGGGAGT-CTTTGCCTGCTGGCCAGAGTGGGAAACAGCAGATGCTGCCCGGGCTGGCCTGTGGAGA---------------GGAAGGCTCAGTGGGGCCATGGACAGATGGTGTCCGCCAGGCCTGTGCAAGGTGAGATGGGCCTTCATGGTGGTCTGGCCT------- i calJac3.chr5 C 0 C 0 e canFam3.chr9 57395214 3399 - 61074082 I a score=2885.000000 s hg38.chr17_GL383566v1_alt 21248 13 + 90219 -----GGACCAGG-------CCCCC s panTro4.chr17 76215555 13 + 82630442 -----GGGCCAGG-------CCCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67313469 13 + 73212453 -----GGGCCAGG-------CCCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3638037 20 - 94967081 -----GGTACAGGTGGGGCTCCTGG i nomLeu3.chr14 I 2 C 0 s macFas5.chr16 74614654 17 + 80997621 -----GGTACAGGTGGGG--CCCC- i macFas5.chr16 I 4 I 3 s papAnu2.chr16 68619718 17 + 74645514 -----GGTACAGGTGGGG--CCCC- i papAnu2.chr16 I 4 I 3 s calJac3.chr5 126501679 23 + 159171411 GGCCAGGTACAGGTGGGGCTCCT-- i calJac3.chr5 C 0 C 0 e canFam3.chr9 57395214 3399 - 61074082 I e rheMac3.chr16 74805863 22 + 80904711 I e chlSab2.chr16 30672840 22 - 75148670 I a score=2545576.000000 s hg38.chr17_GL383566v1_alt 21261 864 + 90219 --GGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCACGAGGGACCCCAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATACTTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTTCGAGGCTCATGGCCAGAAGGCT------GGGAGCTCCCTGAAGGC--AAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGGCCATGGATGGGGGCCTTGGGGCCAACCACCCGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATGGAGGAGTAGCCTGACACTGAGAAGTGAGGGGGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacatgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgggttctcacgaggtctgatggttttataaggggctcttctcccttcctattccttctctttctctcctgctgccttgcgaagaaggcgtctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccatgtggaactgtgagtcaattaaacctccctggctgataaattacctagtctcgggtagtatctttatggcagtgtggaaatggactaatacaGCAGGTGATCTGGGAATGGAGGGGAAATACTTCTGGGAATGTCACTGATCTAAAACCTGTCTGTAGTGGGGTTGGATGACGAGCCACGCTGGTGAACCGATTTCCTGATCCTC s panTro4.chr17 76215568 864 + 82630442 --GGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCATGAGGGACCCTAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATACTTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTTCGAGGCGCATGGCCAGAAGGCT------GGGAGCTCCCTGAAGGC--AAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGGCCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATGGAGGAGTAGCCTGACACTGAGAAGTGAGGGGGCATCTAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgggtgggttctcacgaggtctgatggttttataaggggctcttctcccttcctattccttctctcgctctcctgctgccttgtgaagaaggcgtctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccgtgtggaactgtgagtcaattaaacctccctggctgataaattacctagtctcgggtagtatctttatggcagtgtggaaatggactaatacaGCAGGTGATCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTGATCTAAAACCTGCCTGTAGTAGGGGTGGATGACGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67313482 863 + 73212453 --AGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCACGAGGGACCCCAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATACTTCCAGGATCCCGA-GGGAGGAGACAGCCCCGGACTTCGAGGCACATGGCCAGAAGGCT------GGGAGCTCCGTGAAGGCAAAAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGACCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATGGAGGAGTAGCCTGACACTGAGAACTCAGGGAGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggaaggaggtgattggatcatggaggcagcttctccagtgctgttctcgtgatagtgagtgggttctcacgaggtctgatggttttataaggggctcttctcccttccttttccttctctt--tctcctgctgccttgcgaagaaggcgtctgcttctccttctgccgtaagtgtaagtttcctgaggtgtccccagctatgtagaactgtgagtcaattaaacctcccttgctgatacattacctagtctcaggtagaatctttatagcagtgtggaaatggactaatacaGCAGGTGATCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTGATCTGAAACCCGCCTGTAGTGGGG-TGGATGGCAAGCCATGCTGGTGAACCGATTTCCTGATCCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3638057 821 - 94967081 --GGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAGAGGAGCCCTAGGAGCACGAGGGACCCCAACTGGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGATCTTTCCAGGACTCTGA-GGGAGGAGACAGCCCCGGACTTCGAGGCACATGGCCAGAAGACTGGGAGCGGGAGCTGCGTGAAGGT--GAGCACAGGGCACCCAGAAGACAGCAGCAGGCAGGGGCTATGCATGGGGACCTTGGGGCCAACCCCCAGGTGGAGGCTTGATGGAAGGAGGAAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGCTTATAGAGGAGTAGCCTGACACTGAGAAGTCAGGGAGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccagctctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagcgagtgggttctcacgaggtctgatggttttataaggggctcttctcccttcgttttccttctctc-------------------------tcgcctgcttccccttctgctgtgagtgtaagtttcctgaggtctccccagccatgtagaactgtgagtcaattaaacctcccttgttgatacattacctagtctcgggtagtatcttgatagcagtgtggaaatggactaatacaGTAGGTGA-----------------------TCTGGGAATGTCACTGATCTGAAACCCGCCTATA-CGGGGATGGATGACGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74805885 861 + 80904711 --GGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGACCACAAGGGACCCCAACTCGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTAATTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTCTGAGGCACATAGCCAGAGGGCT------GGGAGCTCTGTGAAGGC--GAGCACAGGGAACCCAGAAGAGAGCGGCAGGCAGGGGCCATGCGTGGGGGTCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgagttctcacaatgtctgatggttttataaggggctcttctcccttccttttccttctctc--tctcctgctgccttgcgaagaaggtgcctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccacatagaaccgtgagtcagttaaacctcccttgttgataaattacctagtctcgggtagtatctttatagcagtgtggaaatgggctaatacaGCCAGTGACCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGGGGG-TGGATGATGAGCCACTCTGGTGAACCGATTTCCTGATCCTC i rheMac3.chr16 I 22 C 0 s macFas5.chr16 74614674 861 + 80997621 --GGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGACCACAAGGGACCCCAACTCGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTAATTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTCTGAGGCACATAGCCAGAAGGCT------GGGAGCTCTGTGAAGGC--GAGCACAGGGAACCCAGAAGAGAGCGGCAGGCAGGGGCCATGCGTGGGGGTCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGACGGTCCTTGAGGGTCCTTGGATGCCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgagttctcacaaggtctgatggttttataaggggctcttctcccttccttttccttctctc--tctcctgctgccttccgaagaaggtgcctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccacatagaaccgtgagtcagttaaacctcccttgttgataaattacctagtctcgggtagtatctttatagcagtgtggaaatgggctaatacaGCCAGTGACCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGGGGG-TGGATGATGAGCCACTCTGGTGAACCGATTTCCTGATCCTC i macFas5.chr16 I 3 C 0 s papAnu2.chr16 68619738 851 + 74645514 --GGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGAGCACAAGGGACCCCAGCTCGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTACTTCCAGGATCCCGA-GGGAGGAGACAGCCCTGGACTCTGAGGCACATAGCCAGAAGGCT------GAGAGCTCTGTGAAGGC--GAGCACAGGGAGCCCAGAAGAGAGCGGCAGGCAGGGGCCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCttgatggaaggagggagggagccacCGAC----------GGTCCTTGGATGTCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGGTCCCAGGTCTGGGTGAGCCAGGTGat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagctTCCCcagtgctgttctcgtgatagtgagtgagttctcacaaggtctgatggttttataaggggctcttctcctttccttttccttctctc--tctcctgctgccttgcgaagaaggtgcctgcttccccttctgccgtgagtgtaagtttcctgaggtctccccagccacatagaaccgtgagtcagttaaacctcccTTGTtgataaattacctagtctcgggtggtatctttatagcagtgtggaaaTGGGCTAATACAGCCGGTGACCTGGGAATGGAGAGGAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGAGGG-CGGATGATGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i papAnu2.chr16 I 3 C 0 s chlSab2.chr16 30672862 851 - 75148670 --GGATGCATCCCTCCCCCAGCAGGCAGTGGATTGGAAAGGAGCCCTAGGAGCACAAGGGACCCCAACTTGGGGGACTTCAGAGGTGCCTGCCTGGGAGGGGGCAGGTGCAAGAAAGGTACTTCCAGGACCCCGA-GGGAGGAGACAGCCCCGGACTCTGAGGCACATAGCCAGAAGGCT------GGGAGCTCTGTGAAGGC--GAGCACAGGGAACCCAGAAGACAGCAGCAGGCAGGGGCCATGCATGGGGGCCTTGGGGCCAACCACCAGGTGAAGGCTTGATGGAAGGAGGGAGGGAGCCACCGAC----------GGTCCTTGGATGTCTGTTTATGGAGGAGTAGCCTGACACTGAGAAGTCAGGGGGCATCCAGATCCCAGGTCTGGGTGAGCCAGGtgat----ctggtttggctctgtgtccccacccaaatctcatcttgaattgtaatccccacgtgtggagggagggaggtgattggatcatggaggcagcttccccagtgctgttctcgtgatagtgagtgagttctcacaaggtctgatggttttataaggggctcttctcccttccttttccttctctc--tctcctgctgccttgcgaagaaggtgcctgcttccccttctgccgtgagtgtaagttccctgaggtctccccagccacgtagaaccgtgagtcagttaaacctcccttgttgataaattacctagtctcgggtagtatctttctagcagtggggaaatgggctaatacaGCCGGTGACCTGGGAATGGAGAGAAAATGCTTCTGGGAATGTCACTCATCTGAAACCCGCCTGTAGGGGGG-TGGATGATGAGCCACGCTGGTGAACCGATTTCCTGATCCTC i chlSab2.chr16 I 22 C 0 s calJac3.chr5 126501702 850 + 159171411 GGTGATGCGTCCCTCCCCTGGCAGGCAGTAGATTGGAGAGGAGCCCTAGGAGCATGAGAGACCCCAACTCGGGGGACTTCAGAGCTGCCTGCCTGGGTGGGGACAGGTGCAAGGATGAGACTTCCAGGACCCCGAGGGGAGGAAACAGCCACAGACTTTGAGGCGCATGGCAAGAAGGCT------GGGAGCTCCGAGAAGGC--GAGCACAGGG-ACCCAGAAGACAGCAGCAGGCAGGAGCCCTGCGTGGG--CCTGGGGGCCAACCACCAGGTGAAAGCTTGGTGGAAGGAGGGAGGGAGCCACCAACAGTCCTTGAGGGTCCTTGGATGCCTGTTTATGGAGGAGTAG-CTGACACTGAGAAGTCAGGGACTATCCAGGTCCCA-GCCTGGGTGAGCCAGGTGATCTGGCtggtttggctctgtg------------tctcatcttgaactgtaatccctacttttggagggagggaggtgattggatcatggagctagtttgcccagtgctgttctcgtgatagtgagtgagttctcacgaggtctgatggttttataagggtctcttttcccttccttttccttctttc--tctcctgctgcgttgcgaggaaggtgcctgcttccccttccgccctgagtgtaagtttcctgaggcctccccagccgtgcaaaactgtgagtcaattaaacctcccttgtttatagattacctagtctagggcagtatctttacagccgcttggaaatggactaatacaGTGGGTGATCTGGAAATGGAGAGGAAATACCTCTGGGAATGTCACTGA--TGAAACCTGCCTGTAGTAGGAGTGGGTGACAAGCCACACTGCTGAACCGATTTCCTGATCCTC i calJac3.chr5 C 0 C 0 e canFam3.chr9 57395214 3399 - 61074082 I a score=1537796.000000 s hg38.chr17_GL383566v1_alt 22125 510 + 90219 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GATGTATGGGCCCGCTTGTCTGGTT------------CCAGCCTTTGGGGC-CTGCTGAGATTTGCTGGGGCCGCAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGAACTTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTGCTGTGCTCCTAGTTTATGAACTACTGATCTTTGCTGACTCTATGGAGAGAGCAATGGATGGAAGGGATGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTATTGTAATTCTGTGCACGGCCCCCTCTTGACAT--TCTCCACTCCTGTGGAATTTGGTTTTACGACCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGTGTTTCCCTGTGCTCAGAT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGATCCAGAGTCAATGAAGAC s panTro4.chr17 76216432 540 + 82630442 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GATGTATGGGCCCGCTTGTCTGGTT------------CCAGCCTTTGGGGC-CTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGACCTTTTCCAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTGCTGTGCTCCTAGTTTATGAACTACTGATCTTCGCTGACTCTATGGAGAGAGCAATGGATGGAAGGAATGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTGTTGTAATTCTGTGCACGGCCACCTCTTGACAT--TCTCCACTCCTGTGGAATTTGGTTTTACGACCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGCGTTTCCCTGTGCTCAgatggtgacggtgacggtgatggtgacggtgacggtgacggtgTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAATGAAGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67314345 511 + 73212453 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GATGTATGGACCCGCTTGTCTGGTT------------CCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGACCTTTTCAAGAACATTTTCAGGGTGTAGGTGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAACTACTGATCTTCGCTGACTCTATGGAGAGACCAATGGATGGAAGGGATCGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAATATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTATTGTAATTCTGTGCACAGCCACCTCTTGATAT--TCTCCACTCCTGTGGAATTTGGTTTTACAACCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGCGTTTCCCTGTGCTCAGAT------------------------------GGTGATGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAATGAAGAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3638878 511 - 94967081 AGGGATTCCTGCAGGGGTGGCCCAGGTTCCTGGCTCTCAGACATGGG----------GGTGCATGGACCCACTTGTCTGGTT------------CCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCAGTTGGCTTCTTGCTTGAGCCCTTTTCGAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTCTAGGAACTGCTGATCTTCACTGACTCTATGGAGAGATCAATGGATGGAAGGGATGGAAGGCCCTTTGCTTTTTAAAGCAAAATAGAGAGCATCTGAGCTATGCAAGAAGAGCAAGGACAGGGACCTATTGTGATTCTGTGC-CGGCCACCTCTTGATAT--TCTCCACTCCTGTGGAATTTGGTTTTACGACCACAGGACTAAGCTAGTTAGGA--------------CGTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGGGCCGCGTTTCCCTGTGCTCAGGT------------------------------GGTGATGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAATGAAGAC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74806746 520 + 80904711 AGAGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCGCTTGTCTGGTTCCAAAGCTGGTTCCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCTGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAATTACTGATCTTTGCTGACTC--TGGAGAGTTCAGTGGATGGAAGGGGTGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCACGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTACCACAGAACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGCTCAGTT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i rheMac3.chr16 C 0 I 10 s macFas5.chr16 74615535 520 + 80997621 AGGGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCGCTTGTCTGGTTCCAAAGCTGGTTCCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCTGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAATTACTGATCTTTGCTGACTC--TGGAGAGTTCAGTGGATGGAAGGGGTGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCACGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTACCACAGAACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGCTCAGTT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68620589 522 + 74645514 AGGGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCACTTGTCTGGTTCCAAAGCTGGTTCCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCCGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTACTGTGCTCCTGGTTTAGGAACTACTGATCTTTGCTGACTCTATGGAGAGTTCAATGGATGGAAGGGGTGGAAGGCCCTTTGCTTTCGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCATGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTGCCACAGGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGCTCAGAT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 30673713 503 - 75148670 AGGGATTCCTGCAGCAGTGGCCCAGGTTCCT-GCTCTAGGACATGGG----------GGTGCATGGA-CCGCTTG-------------------CCAGCCTTTGGGGCGCTGCTGAGATTTGCTGGGGCCACAGGAAGAGGAGCCGTTGGCTTCTTGCTTGAGACATTTTCAAGAACATTTTCAGGGTGTAGATGAGTGAAGGACCCACGTGCTACTGTGCTCCTGGTTTAGGAACTACTGATCTTTGCTGACTCTATGGAGAGTTCAATGGATGGAAGGGATGGAAGGCCCTTTGCTTTTGAAAGCAAAATAGAGAACATCTGAGCTCTGCAAGAAGAGCAAGGACAGGGACATACTGTAATTCTGTGCACGGCACCCTCTTGATAC--TCTCCACTCCTGTGGAATTTGGTTTTGCTACCACAAGACTAAGCTAATTAGGA--------------CTTA----------------------------------------------------------------------------------------------------GCTGAGGAG---ATGCGCCGCGTTTCCCTGTGTTCAGAT------------------------------GGTGACGGTGTTGTGCACCTTCTCTTGCCA-CAAGACCCAGAGTCAGTGAAGAC i chlSab2.chr16 C 0 I 1 s calJac3.chr5 126502552 608 + 159171411 AGGGATTCCTGCAGGGGTGGCCCGGGTTCCT-GCTCTAGGATATGGA----------GAAGCATGGACCCGCTTGTCTGGTT------------CCAGCCTTTGGGGTGCTGCTGAGACTTGCTGGGACCACAGGAAGGGGAGCAGTTGGCTTCTTGTTTGATACCTTTTCAAGAA-GTTTTCAGGGTGTAGATGAGTGAAGGACCCACATGCTGCTGTGCTCCCGGTTTAGGAACTACTGTTCTTTGCTGACTCAGTGGAGAGATCAATAGATGGAATGGATGAAAG--CCTTTGCTTTTGAAAGCAGAATAGAGAACATCTGAGCTATGCAAGAAGAGCATGGACAGGGACCTATTATAATTCTGTGAACGGCCGCCTCTTGATAA--TCTCCACTGCTGTGAAATTTGGTCTTTCGACCACAGGAAGAAGCTAATTAGGA--------------GTCAGCTGAGGAGTTGGGCCACTTGCTGAGGAGATGGGCTGCGTGCTGAGGAGTTGGGCCGCGTGCTGAGGAGTTGGGCCGCGTGCTGAGGAGTTGGGCCGCCTGCTGAGGAG---TTGGGCCGTGTTTCCATGCGCTCAGTT------------------------------GGTAACAATGTCGTGCAGCTTCTCTTGCCA-CAAGACCCAGAGTCAATTAAAAC i calJac3.chr5 C 0 C 0 s canFam3.chr9 57398613 503 - 61074082 AGGGGCTGCCGTTGGTGTGTCCCTGTGTCCA-GTGCTGGCCCCTGGGCTCCCACAGTGGGGAGGGAGCCCCCTGCCCCCGCT------------CCA-CCCCTGGGGC-CGGCTGTGACACGCTCAGGCCTCAGGCAGGGAAGTGGGGGACTTCCTGCTTGGGACATTTCCAAGACAGTCTCGGGCGTGTGGG-GAG--------------------ATGCACCTGCTTTCAGAACCACTGCTCTCTGCCGATCC-----------CCACAGACAGACAAGTGGGAAA--CACTCGTGTTTGGAAGCCAGAGAGAGCAGGTCTGGGTTGTGCATGGGAACCTGAGCCAGGAGTCTGTTGTCATTCTGTGG-CAGGTGCCCCTTGATCCTTTCTCCCTTCCTGTGTGAGCTGATC-TGTGACCGAAGGAATGAGCTAGAGAGGGATGGGGCCCCACCCCTCG----------------------------------------------------------------------------------------------------GCCGATGAGCTTACGGGTGGCCGGTGGATGTGCCCAAGC------------------------------GGCAGTGCCATTGAGTGGCTTCTCCTGCCACCAAGGCCTAGACGCAAATTAAAC i canFam3.chr9 I 3399 C 0 a score=8307.000000 s hg38.chr17_GL383566v1_alt 22635 3 + 90219 AGG s panTro4.chr17 76216972 3 + 82630442 AGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67314856 3 + 73212453 AGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639389 3 - 94967081 AGG i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616055 3 + 80997621 GGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68621112 3 + 74645514 GGG i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 30674217 3 - 75148670 GGG i chlSab2.chr16 I 1 C 0 s calJac3.chr5 126503160 3 + 159171411 AGG i calJac3.chr5 C 0 I 1 s canFam3.chr9 57399116 3 - 61074082 AGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74807266 10 + 80904711 I a score=285722.000000 s hg38.chr17_GL383566v1_alt 22638 187 + 90219 ACTCCAGAGTGTTTGCACAGAAGCCGGGTCTTCCAGCCAAAGTGGATTCTGTGTGATTACAA--------------GTTTGCTAGTAATGCCACCCTGGtttatttattttaa-----tttattttattttttt-AAACAGCAAAACCAAAATGAAGCAATTGAATTGGGTTTCACAATAATGAAGGAAAAGCCTTGTGTCTAtttt s panTro4.chr17 76216975 191 + 82630442 ACTCCAGAGTGTTTGCACAGAAGCCAGGTCTTCCAGCCAAAGTGGATTCTGGGTGATTACAA--------------GTTTGCTAGTAATGCCACCCTGGTTTAtttattttaatttattttattttattttTTT-AAACAGCAAAGCCAAAATGAAGCAATTGAATC-AGTTTCACAATAATGAAGGAAAAGCCTTGTGTCTAtttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67314859 172 + 73212453 ACTCCAGAGTCTTTTCACAGAAGCCAGGTCTTCCAGCCAAAGTGGATTCTGTGTGATTACAA--------------GTTTGCTAGTAATGCCACCCCGGTTTATT-------A-------------ATTTTTTT-AAACAGCAAAGTCAAAATGAAGCAGTTGAATCGGGTTTCAAAATAATGAAGGAAAAGCCTTGTGTGTAtttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639392 177 - 94967081 ACTCCAGAGTCTTTGCACAGAAGCCAGGTCTTCCAGCCAAAGTGGATTCTGTGTGATTACAA--------------GTTTGCTGATAATGCCACCCTGGTTTATT---------------TATTTTATTTTTTT-AAACAGCAAAACCAAAATGAATAAATTGAATCTGGTTTGACAATAATGAAGGAAAAGCCTTGTGTCTAtttt i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68621115 181 + 74645514 ACTCCAGAGTCTTTGCACAGAAGCCAGGTCTTCCAGCCAAAGTAGATTCTGTGTGATTACAA--------------GTTTGCTAATAATGCCaccctgtt------------ttaaattttattttatttttttaaaacagcaaaaacaaaatgaagcaattGAATCGAGTTTCGCAATAATGAAGGAAAAgctttgtgtctatttt i papAnu2.chr16 C 0 I 1447 s chlSab2.chr16 30674220 191 - 75148670 ACTCCAGAGTCTTTGCACAGAAGCCAGGTCTTCCAGCCAAAATAGATTCTGTGTGATTACAA--------------GTTTGCTAATAATGTGACCCTGTTt--tttattttattttattttattttattttTTTAAAACAGCAAAAACAAAATGAAGCAATTGAATTGGGTTCCACAATGGTGAAGAAAAAGCTTTGTGTCTAtttt i chlSab2.chr16 C 0 I 1476 s calJac3.chr5 126503164 171 + 159171411 ACTCCAGCATCTTTGCACAGAAGCCAGATCGTCCAGCCGAAGTGGATTCAGTGTGATTACAA--------------GTTTGCTACTAATGTTGCCCTGGTAGATT--------------------TATTATTTT-AAACAGCAAAACCAAAATGAGGCAATTGAATCAGGCTTCATGGTGATGGAGAAAAAGCC-TGTATCTATTTT i calJac3.chr5 I 1 I 3786 s canFam3.chr9 57399119 177 - 61074082 GTCTCAGG---TCTGCACAGAAGCCAGCTTTTCCACTCAACATGGATTCTTTAAGAGGGCAATTATTATTATTATTTTTTGCTAATAATGTTAC------------------------TTTTTCTTTTTTTTTT-TAATTGCAAATCC-ATATGAACCTTTTGAATTAGGTTTCACGGTAAAGCAGGAGAAGCC-TGTGTCTGTGTT i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74807266 10 + 80904711 I e macFas5.chr16 74616058 0 + 80997621 C a score=1422.000000 s hg38.chr17_GL383566v1_alt 22825 3 + 90219 gtt s panTro4.chr17 76217166 3 + 82630442 ttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315031 3 + 73212453 ttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639569 3 - 94967081 ttc i nomLeu3.chr14 C 0 C 0 s canFam3.chr9 57399296 3 - 61074082 TTT i canFam3.chr9 C 0 I 3641 e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30674411 1476 - 75148670 I e papAnu2.chr16 68621296 1447 + 74645514 I e macFas5.chr16 74616058 0 + 80997621 C a score=241401.000000 s hg38.chr17_GL383566v1_alt 22828 493 + 90219 tgtttgtttgtttgagacggagtttcgctcttgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacctccgcctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggattacaggcactggccacaatgcccggctaatttttttggtatttttaatagagatgggttttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccCTTGTGTCTGttttttaattaaaattttgatggagataattgtagatccacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccgccaatggcaacatcttgcaaaattataattcgctaccacaaccaggctatcaatgttgggacaatcCACCAGtcttattattta s panTro4.chr17 76217169 449 + 82630442 tgtttgtttgtttgagacggagtttcgctcttgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacctccgcctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggattacaggcaccagccacaacgcccggctaatttttttggtatttttaatagagatgggttttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccagccCTTGTGTCTGttttttaattaaaattttgagggagataattgtagatccacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccgccaatggcaacatcttg--------------------------------------------caaTCCACCAGTCttattattta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315034 482 + 73212453 t-----tttttttgagacagagttttgctcttgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacctccccctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggattacaggcacccgccacaatgcccggctaatttttttggtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggcttacaggtgtgagccactgcgcccagccCTTGTGTCTGttttttaattaaaattttgatggagataattgtagatccacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccaccaatggcaacatcttgcaaaattataat------ccataaccaggctatcaatgttgggacaatccaccAGtcttattattta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3639572 488 - 94967081 t-----tttttttgagacggagtttcactctcgttgcccaggctggagtgcagtggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcgattattctcctgcctcagcctcccgagtagctgggactacaggtacgtgccacaacgcccggctaatccttttggtatttttagtagagatggggtttcaccatgttggccaggccggtctcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagtcactgcgcccggccCTTGTGTCCGttttttaattaaaattttgatggagataatcgtagattcacatgcaattgcaagaaatcacactgagaaattcctttgaccctttactcattttccaccaatggcaacatcttgaaaaattataatccacaaccacaaccaggctatcaatgttgggacaatccaccagtcttattATtta i nomLeu3.chr14 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30674411 1476 - 75148670 I e papAnu2.chr16 68621296 1447 + 74645514 I e macFas5.chr16 74616058 0 + 80997621 C a score=8130.000000 s hg38.chr17_GL383566v1_alt 23321 24 + 90219 tttatttat----------------------------tgagacagagtatca---- s panTro4.chr17 76217618 24 + 82630442 tttatttat----------------------------tgagacagagtatca---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315516 24 + 73212453 tttatttat----------------------------tgagacggagtcttg---- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3640060 52 - 94967081 tttatttatttacttacttacttacttacttccttcctgagacggagtctca---- i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68622743 30 + 74645514 TTTATTTTT--------------------------CGTGTAACGGAGTCTccctcg i papAnu2.chr16 I 1447 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30674411 1476 - 75148670 I e macFas5.chr16 74616058 0 + 80997621 C a score=150955.000000 s hg38.chr17_GL383566v1_alt 23345 120 + 90219 ctctgttgcccaggctggagtgcagtgacgtgatctcagctcactgcaacctccgctttccaggttcaagtgattctcctgcttcagccacccgagtagctgggattacaagtgtgcagc s panTro4.chr17 76217642 120 + 82630442 ctctgtcgcccaggctggagtgcagtgacgtgatctcagctcactgcaacctctgctttccaggttcaagtgattctcctgcttcagccacctgagtagctgggattacaagtgtgcagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315540 120 + 73212453 ctctgtcgcccaggctgtagtgcagtgacgtgatctcagctcactgcaacctctgctttccaggttcaagtgattctcctgcttcagccacctgagtagctgggattacaggtgtgcagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3640112 120 - 94967081 ctctgtcgcccaggctggagtgcagtgacgtgatctcagttcactgcaacctctgctttccaggttcaagtgattctcctgcttcagccacctgagtagctggaattacaggtgtgcAGC i nomLeu3.chr14 C 0 I 456 s papAnu2.chr16 68622773 120 + 74645514 ctctgccgcccaggctggagtgcagtggcatgatctcagctcactgcaatctccacctcccagattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgtgcacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30675887 120 - 75148670 ctctgccgcccaggctggagtgcaatagcacaatctcagctcactgcaatctccacctcccagattcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgtgcacc i chlSab2.chr16 I 1476 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=57054.000000 s hg38.chr17_GL383566v1_alt 23465 70 + 90219 accacgcccagccaatttttgtatttttagtagagaccggggtttcgccatgttggccaggctggtctcg s panTro4.chr17 76217762 70 + 82630442 accacgcccggccaatttttctatttttagtagagaccggggtttcaccatgttggccaggctggtctcg i panTro4.chr17 C 0 I 424 s ponAbe2.chr17 67315660 70 + 73212453 accacacccggccaatttttgtatttttagtagagaccggggtttcaccatgttggccaggctggtctca i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 68622893 69 + 74645514 accacgcccggccaatttttgtatttttagtagagact-gggtttcaccaaggtggccaggctggcctca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30676007 69 - 75148670 accacgcccggccaatttttgtatttttagtagagacc-aggtttcaccatgttggccaggctggcctca i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3640232 456 - 94967081 I e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=163340.000000 s hg38.chr17_GL383566v1_alt 23535 208 + 90219 aactcctgacctcaagtgatccacctgccttggcctcccaaagtgctgggattacaggcatgagccactgtgcccagtcCCAATTTTTTTTT--GATGCCTGCTCCTTCT---GAGGCAGgtgtactgatttttatgtggacgtaaactttcgtttttccaggcagtacaatagccgccgtgtcatgtggtagttagttgcgtgttttgtttg s panTro4.chr17 76218256 213 + 82630442 aactcctgacctcaagtgatccacctgccttggcctcccaaagtgctgggattacaggcatgagccactgcgcccagtcCCAATTTTTTTTTTTGATGCCTGCTCCTTCTTCTGAGGCAGgtgtactgatttttatgtgaacgtaaactttcgtttctccaggcagtgcgatagctgccgtgtcatgtggtagttagttgcatgttttgtttg i panTro4.chr17 I 424 C 0 s ponAbe2.chr17 67315730 211 + 73212453 aactcctgacatcaagtgatccacctgccttggcctcccaaagtgctgggattacaggcatgagccactgcgcccagtcCCAATTTTTTTTT--AACGCCTGCTCCTTCTTCTGAGGCAGgtgtactgatttttatgtgaacgtaaactttcgtttctccaggcagtgcaacagccgccgtgtcatgtggtagttagttgcatgtttcgtttg i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 68622962 197 + 74645514 aa--------------taatccacccgcctcggcctcccaaagtgctgggattacaggcgtgaaccactgcactcagtcccaattttttttt--aatgcctactCCTCCTTCTGAGGCAGGTGTACTGATTTGTATGTGAACGTAAACTTTCTTTTCTCCAGGTAGTGCAACAGTCACTATGTCAGGTGGTAGTTAGTTGCATGTTTTGTTTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30676076 209 - 75148670 aactcctggcctcaagtgatccgcccacctcggcctcccaaaatgctgggattacaggcatgaaccactgcactcagtcccaa--ttttttt--aatgcctgctccttcttctgaggcaggtgtactgatttgtatgtgaacgtaaactttcgtttctccaggtagtgcaacagtcaccatgtcaggtggtagttagttgcgtgttttgtttg i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3640232 456 - 94967081 I e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=949584.000000 s hg38.chr17_GL383566v1_alt 23743 758 + 90219 ataagaaactgctgtcctggcgcagtggctcacgcttgtaatcccagcactttgggaggccaaggcaggagggtcacatgagctcaggagtttgagaccagcct-gggcaacatggtgaaatcccatctttactaaaaatacagaaaattagtcaggcatggtggcatgtgcctgtggtcccggctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggttgcaataagccgacatcacaccactgcaccccagcctgggtaacaaagtgggatcccgtctc---------aaaaaaagaaaagaaactgccagactgttttccagagtaactgtactgttcccgccagcagtgtgtgcgtgatcttatttctctgcatcctcattagcatttggtgttgccaccattttttgtttcagccgttctgatagttaacgcagtgatatcttattgtagtcgtaatgtgaatttccctaatggctcacgatattgaacgtcttttcacgtgcttatttgccatccgtatatcctttttggtaaaatat---ttcatatctcttgcccatgttctaattacattctttgatgcttttctgttgaattACActgagggaggtaagggaaccagccaagcagattccctggagaagaacattccagaaagagagaagagctaattt-------------------------------------------------aaaggccatga-gacaggagttcagggtgttcaagataaagcaccagagtcagtgtagccgggcgagtgagctgcgg s panTro4.chr17 76218469 758 + 82630442 ataagaaactgctgtcctggcgcagtggctcccgcttgtaatcccagcactttgggaggccaaggcaggagggccacatgagctcaggagttcgagaccagcct-gggcaacatggtgaaatcccatctttactaaaaatacagaaaattagccaggcatggtggcatgtgcctgtggtcccagctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgcaataagccgacatcacaccactgcactgcagcctgggtaacaaagtgggatcctgtctc---------aaaaaaagaaaagaaactgccagactgttttccagagtaactgtaccgttcccgccagcagtgtgtgcgtgatcttatttctctgcatcctcattagcatttggtgttgccaccattttttgttttagccgttctgatagttaacgcagtgatatcttattgtagtcgtaatgtgaatttccctaatggctcacgatattgaacgtcttttcacgtgcttatttgccatccgtatatcctttttggtaaaatat---ttcatatctcttgcccatgttctaatgacattctttgatgcttttctgttgaattACActgagggaggtaagggaaccagccaagcagattccctggagaagaacattccagaaagagagaagagctaattt-------------------------------------------------aaaggccatga-gacaggagttcagggtgttcaagataaagcaccagagtcagtgtagccgggcgagtgagctgcgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67315941 812 + 73212453 ataagaaactgctgtcctggcgcagtggctcacacctgtaatcccagcactttgggaggccaaggcaggaggatcacttgagctcaggagtttgagaccagcctggggcaacatggtgaaatcctgtctttactaaaaatgcagaaaattagctgggcatggtggcatgtgcctgtggtcccagctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgcaataagccgacatcacaccactgcactccagcctgggtaacaaagtgggatcctgtctc-aaaaaaagaaaaaaagaaaagaaactgccagaccgttttccagagtaactgtaccattcccaccagcagtgtgtgcatgatcttatttctctgcatcctcattagcatttggtgttttcaccattttttgttttagccgttctgatagttaacgcagtgatatcttattgtagttgtaatgtgaatttccctaatggctcacgatattgaacatcttttcacgtgcttatttgccatccgtatatcctttttggtagaatat---ttcatatctcttgcccatgttctaactacattctttgatgcttttctgttgaattCCActgagggaggtaagggaaccagccaagcagattccctggagacgaacattcc-----gaaagaagagctattttaaggTTGTGATATATGATTCCAGTGTGTTCAAATAANNNNNNNNNNTTAaagggctgtgaggacaggagttcagtgtgttcaagataaagcaccagagtcagtgtagccgggcgagtgagctgagg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3640688 762 - 94967081 acaaaaaaCTGCTGTcctggcgcagtggctcacacctgtaatcccagaactttgggaggccaaggcaggaggatcacttgagctgaggagtttgagaccagcct-gggcaacatggtgaaatcccatctttactaaaaatacagaaaattagccgggcatggtggcatgggcctgtggtctcagctacctaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgcaataagccgacatcacaacactgccctccagcctgggtaacaaagtgggatcttgtctc-aaaa----aaagaaaaaaaagaaactgccagactgttttccagagtaactgtaccgttcccaccagcagtgtgtgcatgatcttattcctctgtgtcctcattagcatttggtgttgccaccattttttgttttaaccgttctgatagttaacgcactgatatctcattgtagttgtaatgtgaatttccctaatggcttgggatattgaacagttttttgcgtgcttacttgccatccgtatatcctttttggtaaaatat---ttcatatcccttgcccatgttctaattacattctttgatgcttttctgttcaattACActgacggaggtaagggaaccagccaagcagattccctggagaagaacattccagaaagagagaagagctaattt-------------------------------------------------aaaggccatga-gacaggagttcagtgtgttcaagataaagcaccagagtcagtgtagccgggcgagtgagctgcgg i nomLeu3.chr14 I 456 C 0 s papAnu2.chr16 68623159 768 + 74645514 ATAGGAAACTGCTGTCCTgacgcagtggctcgcgcctgtaatcccagcactttaggaggccaaagcaggaggatcacttgagctcaggagtttgagaccagcct-gggcaacatggtgaaatcctgtctctactaaaaatacaaaaaattagccaggcatggtgacatgtgcctctggtcccagctacttaggaggctgaagtgggaggatcacttgagcccaggaggtcaaggctgccatgagccgacatcacaccactgcactccagcatgggtaacaaagtgggatcctgtctc-aaaaaaagaaaaaaagaaaagaaactgccagactgttttccagagtAACTGTAccgttcccaccagcagtgtgtgcgTGATCtcatttctctgcatcctcattaGCATTTGGTGTTGCCACCATTTTTTGTTGTAGCCCTTTTGATGGTT-ACGCAGCGATACCTCACTGTAGCTGTAATGTGAATTTCCCTAATGGCTCacgatattgaacatcttttcatgtgcttatttgccatccgtATATCgtttttggtaaaatatttgttcatatcttttgcccatgttCTAAGTCGATTCTTTGATGCTTTTCTGTTGAATTACACTGAGGGAAGTAAGGGAACCAGCCAAGCAGATTCCCTGgagaagaacattccagaaagagagaagagctaATTC-------------------------------------------------AAAGGCCATGA-GACAGGAGTTCCGTGTGTTCAAGATAAAGCACCAGAGTCGGCGTAGCCAGGCGAGTGAGCTGCGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30676285 769 - 75148670 ataagaaactgctgtcctgacgcagtggctcacgcctgtaatcccagcactttaggaggccaaggcaggaggatcacttgagctcaggagtttgagaccagcct-gggcaacatggtgaaatcccgtctctactaaaaatacaaaaaattagccaggcatggtgacatgtgcctctggtcccagctacttaggaggctgaggtgggaggatcacttgagcccaggaggtcaaggctgccatgagccgacatcacaccaccgtactccagcatgggtaacaaagtgggatcctgtctcaaaaaaaaggaaaaaagaaaagaaactgccagactgttttccagagtaactgtaccgttcccaccagcagtgtgtgcgtgatctcatttctctgcatcctcattagcatttggtgttgccaccattttttgttttagcccttctgatggtt-acacagtgatacctcactgtagctgtaatgtgaatttccctaatggctcatgatattgaacatcttttcgtgtgcttatttgccatccgtatatcgtttttggtaaaatatttgttcatatcttttgcccatgttctaattcgattctttgatgcttttcttttgaattACActgagggaggtaagggaaccagccaagcagattccctggagaagaacattccagaaagagagaagagctaattc-------------------------------------------------aaaggccatga-gacaggagttccatgtgctcaagataaagcaccagagtcggtgtagccaggtgagtgagctgcgg i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616058 0 + 80997621 C a score=7393.000000 s hg38.chr17_GL383566v1_alt 24501 7 + 90219 gagaggg s panTro4.chr17 76219227 7 + 82630442 gagaggg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67316753 7 + 73212453 gagagGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3641450 7 - 94967081 gagagga i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616058 7 + 80997621 GACCGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68623927 7 + 74645514 GACAGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30677054 7 - 75148670 gacagaA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807266 10 + 80904711 I e calJac3.chr5 126503335 3786 + 159171411 I a score=829223.000000 s hg38.chr17_GL383566v1_alt 24508 354 + 90219 aggcaCATTCACCAAATAATTCATGGCCACCCCCATAACCGGCCCCGCTACAGACAGGCGGCACCGCGCAGTTGGCCCAGGCCCCCACGACGggaaggaacgtgggccactcctgggcagaggca-tgaggaacaggtgagcgatgcctggcctgccttctgcttcttgatgatggctggaggccacgcattgagtttgttgaaa--caagattgtggcagcctggatgggtgagtcaccgcgtggagccgctgctgctctggggagctgcctggctcgctctggacttagcgtgagcgagaagtaaatctgtagtgtatcgtgtcttggagacatcagggcttatttgtcaccact s panTro4.chr17 76219234 356 + 82630442 aggcaCATTCACCAAATAATTCATGGCCACCCCCATAACCGGCCCCCCTACAGACAGGCGGCACCGCGCAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACGTGGGCCACTCCTGGGCAGAGGCA-TGAGGAACAGGTGAGCGATGCCTGGCCTGCCTTCTGCTTCTTGATGATGGCTGGAGGCCACGCATTGAGTTTGTTGAAAGACAAGATTGTGGCAGCCTGGATGGGTGAGTCACCGCGTGGAGCCGCTGCTGCTCTGGGGAGCTGCctggctcgctgtggacttagcgtgagcgagaagtaaatctgtagtgtatcgtgtcttggagacatcagggcttatttgtcaccact i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67316760 356 + 73212453 AGGCACATTCACCAAATAATTCATGCCTACCCCCATAACCAGCCCCCCTACAGACAGGCGGTACCGCGCAGTTGGCCCAGGCCCCCACgaggggaagcaatgtgggccactcctgggcagaggca-tgaggaacaggtgagcgatgcctggcctgccttctgcatcttgatgatcgctggaggccatgcattgagtttgttgaagcacgagattgtggcaacctggatgggtgagtcattgcgtggagccgctgctgctctgaggagctgcctggctcgctctggacttagcgtgagcgagaagtaaatctgtagcgtgtcgtgtcttggagacatcagggcttatttgtcaccgct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3641457 356 - 94967081 aggcaCATTCACCAAATAATTCATGCCCACCCCCATGACCAGCCCCCCTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACGTGGGCCACTCTTGGGCAGAGGCA-TGAGGAACAGGCGAGTGATGCCTGGCCTGCCTTCTGcatcttgatgattgctggaggccatgggttgagtttgttgaagcacaagattgtggcagcctggatgggtgagtcactgcgtggagccgctgctgctctggggagctgcctggctttctctggacttagcatgagcgagaagtaaatctgtagcatataacgtcttggagacatcagggcttatttgtcaccact i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74807276 355 + 80904711 AGGCACGTTCACCAAATAATTCATGCCCA-CCCCATAACCAGCCCC-CTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACATGGGCCACTCCTGGGCAGAGGCACTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACGTGTTGAGTTTGTTGAAGCACGAGATTGTGGCAGCCTGGAGGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTGCCTGGCTCGCTCGGGACTTAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACGTCTTGGAGACATCAGGCCTTATTTGTCACCACT i rheMac3.chr16 I 10 C 0 s macFas5.chr16 74616065 355 + 80997621 AGGCACGTTCACCAAATAATTCATGCCCA-CCCCATAACCAGCCCC-CTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGAGAAGGAACATGGGCCACTCCTGGGCAGAGGCATTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACGTGTTGAGTTTGTTGAAGCACGAGATTGTGGCAGCCTGGAGGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTGCCTGGCTCGCTCGGGACTTAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACGTCTTGGAGACATCAGGCCTTATTTGTCACCACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68623934 355 + 74645514 AGGCACGTTCACCAAATAATTCATGCCCA-CCCCATAACCAGCCCC-CTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACATGGGGCACTCCTGGGCAGAGGCATTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACGTGTTGAGTTTGTTGAAGCACGAGATTGTGGCAGCCTGGAGGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTGCCTGGCTCGCTCAGAACTCAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACATCTTGTAGACATCAGGGCTTATTTGTCACCACT i papAnu2.chr16 C 0 I 22 s chlSab2.chr16 30677061 356 - 75148670 AGCCACATTCGTCAAATAATTAATGCCCACCCCCATAACCAGCCCC-CTACAGACAGGCGGCACTGCACAGTTGGCCCAGGCCCCCACGAGGGGAAGGAACATGGGCCGCTCCTGGGCAGAGGCATTGAGGAACAGGTGAGCGATGCCTGGCATTCCTTCTGCGTCTTGATGATCGCTGGAGGCCACATGTTGAGTCTGTTGAAGCACGAGATTGTGGCAGCCTGGAAGGGTGAGTCACCACGTGGAGCCGCTGCTGCTCTGGGGAGCTTCCTGGCTCGCTCGGGACTTAGCGTCAGCGAGAAGTAAATCTGTAGCACATCACGTCTTGGAGACATCAGGGGTTATTTGTCACCACT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e calJac3.chr5 126503335 3786 + 159171411 I a score=7095.000000 s hg38.chr17_GL383566v1_alt 24862 5 + 90219 gcaaa s panTro4.chr17 76219590 5 + 82630442 gcaaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3641813 5 - 94967081 gcaaa i nomLeu3.chr14 C 0 I 2 s rheMac3.chr16 74807631 5 + 80904711 GCAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616420 5 + 80997621 GCAAA i macFas5.chr16 C 0 I 3 s chlSab2.chr16 30677417 5 - 75148670 GCAAA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624289 22 + 74645514 I a score=8931.000000 s hg38.chr17_GL383566v1_alt 24867 17 + 90219 aatgagttcattctgac s panTro4.chr17 76219595 17 + 82630442 aatgagttcattctgac i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74807636 17 + 80904711 AATGAGTTCATTCTGAC i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 30677422 17 - 75148670 AATGAGTTCATTGTGAC i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3641818 2 - 94967081 I e canFam3.chr9 57399299 3641 - 61074082 I e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624289 22 + 74645514 I e macFas5.chr16 74616425 3 + 80997621 I a score=7044.000000 s hg38.chr17_GL383566v1_alt 24884 25 + 90219 aaatacaGGGATGAGGTCAGCAAAA s panTro4.chr17 76219612 25 + 82630442 aaatacaGGGATGAGGTCAGCAAAA i panTro4.chr17 C 0 I 3 s rheMac3.chr16 74807653 6 + 80904711 AAATAC------------------- i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 68624311 25 + 74645514 AAATACAGGGATGAGGTCAGCAAAA i papAnu2.chr16 I 22 C 0 s chlSab2.chr16 30677439 14 - 75148670 AAATGCAGGGATGA----------- i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3641818 2 - 94967081 I e canFam3.chr9 57399299 3641 - 61074082 I e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e macFas5.chr16 74616425 3 + 80997621 I a score=-829.000000 s hg38.chr17_GL383566v1_alt 24909 1 + 90219 -T s nomLeu3.chr14 3641820 1 - 94967081 -t i nomLeu3.chr14 I 2 C 0 s papAnu2.chr16 68624336 1 + 74645514 A- i papAnu2.chr16 C 0 I 1 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C e macFas5.chr16 74616425 3 + 80997621 I e panTro4.chr17 76219637 3 + 82630442 I a score=600.000000 s hg38.chr17_GL383566v1_alt 24910 1 + 90219 G s nomLeu3.chr14 3641821 1 - 94967081 g i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616428 1 + 80997621 G i macFas5.chr16 I 3 C 0 s papAnu2.chr16 68624338 1 + 74645514 G i papAnu2.chr16 I 1 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C e panTro4.chr17 76219637 3 + 82630442 I a score=28378.000000 s hg38.chr17_GL383566v1_alt 24911 32 + 90219 AGTTCATTCTGACAAATACAGGGATGAGGTCA s panTro4.chr17 76219640 32 + 82630442 AGTTCATTCTGACAAATAGAGGGATGAGGTCA i panTro4.chr17 I 3 C 0 s nomLeu3.chr14 3641822 32 - 94967081 agttcattctgacaaatacaGGGATGAGGTCG i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74616429 32 + 80997621 AGTTCATTCTGACAAATACAGGGATGAGGTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624339 32 + 74645514 AGTTCATTCTGACAAATACAGGAATGAGGTCA i papAnu2.chr16 C 0 T 82 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C a score=4730.000000 s hg38.chr17_GL383566v1_alt 24943 5 + 90219 GCAAA s panTro4.chr17 76219672 5 + 82630442 GCAAA i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3641854 5 - 94967081 GCAAA i nomLeu3.chr14 C 0 T 41 s macFas5.chr16 74616461 5 + 80997621 GCAAA i macFas5.chr16 C 0 T 41 s papAnu2.chr16 68624289 5 + 74645514 GCAAA i papAnu2.chr16 T 82 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C a score=910.000000 s hg38.chr17_GL383566v1_alt 24948 1 + 90219 A s panTro4.chr17 76219677 1 + 82630442 A i panTro4.chr17 C 0 T 41 s nomLeu3.chr14 3641818 1 - 94967081 a i nomLeu3.chr14 T 41 C 0 s macFas5.chr16 74616425 1 + 80997621 A i macFas5.chr16 T 41 C 0 s papAnu2.chr16 68624294 1 + 74645514 A i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74807659 0 + 80904711 C e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I e chlSab2.chr16 30677453 0 - 75148670 C a score=31710.000000 s hg38.chr17_GL383566v1_alt 24949 35 + 90219 ATGAGTTCATTCTGACAAATAGAGGGATGAGGTCA s panTro4.chr17 76219637 35 + 82630442 ATGAGTTCATTCTGACAAATAGAGGGATGAGGTCA i panTro4.chr17 T 41 C 0 s nomLeu3.chr14 3641819 35 - 94967081 atgagttcattctgacaaatacaGGGATGAGGTCG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74807659 13 + 80904711 ----------------------AGGGATGAGGTCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616426 35 + 80997621 ATGAGTTCATTCTGACAAATACAGGGATGAGGTCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624295 35 + 74645514 ATGAGTTCATTCTGACAAATACAGGGATGAGGTCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30677453 5 - 75148670 ------------------------------GGTCA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e ponAbe2.chr17 67317116 0 + 73212453 C e calJac3.chr5 126503335 3786 + 159171411 I a score=1013504.000000 s hg38.chr17_GL383566v1_alt 24984 450 + 90219 GCAAAAATGAGTTCATTCTGACAAATACAgggatgaggtcagcgggacttggcgggtgtggggggccggtcaggtcctgcaaggccttat-gggtcttggtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCTTTTCTCATTTGACTTTGACTTCCTCCCCTC--AACCCCACCTGCTGCAATGAAAGTCGTAATATTTATGAGGTCAAAGGTATTCTCTTTCTCAGTAGCCTCTGGGTTTTGTATCAGCTTGGAAACGACTTTTGCATGTTTAATTCTCCTCCTACCTTTTTTTCTCGTACTTTCATGGCTTTTTAAAAttttatttttattttgtttagaggcagagtctcactcaaggctggagtgcagtggtgccatctcggctcactgcaaccttcccctccgagttcaagtgattgtcgtgcctca s panTro4.chr17 76219672 444 + 82630442 GCAAAAATGAGTTCATTCTGACAAATACAgggatgaggtcagcgggacttggcgggtgtggggggccggtcaggtcctgcaaggccttat-gggtgttggtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCTTTTCTCATTTGACTT------CCTCGCATC--AACCCCACCTGCTGCAATGAAAGTTGTAATATTTATGAGGTCAAAGGTATTCTCTTTCTCAGTAGCCTCTGGGTTTTGTATCAGCTTGGAAACGACTTTTGCGTGTTTAATCCTCCTCCTACCTTTTCTTCTCGTACTTTCATGGCTTTTTAAAAttttatttttattttgtttagaggcagagtctcactcaaggctggagtgcggtggtgtcatctcggctcactgcagccttcccctccgagttcaagcgattgtcctgcctca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67317116 448 + 73212453 gcaaaaatgagttcattctgacaaatacagggatgaggtcagagggacgtggtgggtgtggggggccggtcaggtcctgtaaggccttatggggcgttggtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCTTTTGTCATTTGACTTTGATTTCCTCCCCTC--AACCCCACCTGCTGCAATGAACGTTGTAATATTTATGAGGTCAAAGGTATTCTCTTTCTCAGTAGCCTCTGGGTTTTGTATCAGCTTGGAAAGGACTTTTGCATGTTTAatt---ctcctaccttttcttctcgtactttcatggcttttttaaattttatttttattttgtttagaggcagagtctcactccaggctggagtgcagtggtgtgatattgacccactgcaaccttcccctcccagttcaagcgattctcctgcctca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3641854 443 - 94967081 GCAAAAATGAGTTCATTCTGACAAATACAgggatgaggtcagagggacgtggcgggtgtggggggccggtcaggtcctgcaaggtcttat-gggtcttcgtaaggacaccagctttttggcttgagttctgagtgagatgggaaacagctgCCTTTTGTCATTTGACTT------CCTCCCCTTAAAACCCCACCTGCTGCAATGAAAGTTGTAATGTTTATGAGGTCAAAGGTATTCTCTTTCTCAGTAGCATCTGGGTTTTGTATCAGCTTGGAAAGGACTTTTGCATGTTTAatt---ctcctaccttttcttctcgtactttcatggcttttttaaattttatttttattttgtttagaggcagagtctcactccaggctggagtgcagtggtgcgatctcggctcactgcaaccttcccctcccagttcaagcaattcttctgcctca i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74807672 447 + 80904711 GCAAAAATGAGTTCATTCTGACAAATACaggaatgaggtcagagggacgaggcgggtgtagggggccggtcaggtcctgcaaggccttat-gggtcttggtaaggacaccagctttttggcttgagttctgagtgaggtgggaaacagctgCCTtttgtcatttgactttgacttcatcccctc--acccccaccccctgcagtgaaagttgtaatttttatgaggtcaaatgtattctcttactcagtagcctctgggttttgtatcagcttggagacgacttttgcatgtttaatt---ttcctaccttttcttctggtactttcatgactttttaaaattttatttttattttttttggaggcagagtctcactccattctggagtgcagtggtgtgatctcggctcactgcaaccttcccctcctagttcaagcgattctcctgcctca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616461 447 + 80997621 GCAAAAATGAGTTCATTCTGACAAATACaggaatgaggtcagagggacgtggcgggtgtagggggccggtcaggtcctgcaaggtcttat-gggtcttggtaaggacaccagctttttggcttgagttctgagtgaggtgggaaacagctgCCTTTTGTCATTTGACTTTGACTTCATCCCCTC--ACCCCCACCCCCTGCAGTGAAAGTTGTAATTTTTATGAGGTCAAATGTATTCTCTTACTCAGTAGCCTCTGGGTTTTGTATCAGCTTGGAGAGGACTTTTGCATGTTTAATT---TTCCTACCTTTTCTTCTGGTACTTTCATGACTTTTTAAAAttttatttttattttttttggaggcagagtctcactccattctggagtgcagtggtgtgatctcggctcactgcaaccttcccctcctagttcaagcgattctcctgcctca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624330 441 + 74645514 GCAAAAATGAGTTCATTCTGACAAATACAGGAATGAGGTCAGAGGGGCGTGGTGGGTGTAGGGGGCCGGTCAGGTCCTGCAAGGCCTTAT-GGGTCTTGGTAAGGACACCAGCTTTTTGGCTTGAGTTCTGAGTGAGGTGGGTAACAGCTGCCTTTTGTCA------TTTGACTtcatcccctc--acccccaccccctgcagtGAAAGTTGTAATTTTTATGAGGTCAAATGTATTCTCTTACTCAGTAGCCTCTGGGTTTTGTATCAGCTTGGAGAGGACTTTTGCATGtttaatt---ttcctaccttttcttctggtactttcatgactttttaaaattttgtttttattttttttggaggcagagtctcactccattctggagtgcactggtgcgatctcggctcactgcaaccttcccctcctagttcaagcgattctcctgcctca i papAnu2.chr16 C 0 I 50 s chlSab2.chr16 30677458 430 - 75148670 GCAAAAATGAGTTCATTCTGACAAATGCAgggatgaggtcagagggatgtggcgggtgta-ggggccggtcaggtcctgcaaggccttat-gggtctctgtaaggacaccagctttttggcttgagttctgagtgaggtgggaaacagctgCCTTTTGTCATTTGACTTTGACTTCATCCCCTC--ACCCCCACCCCCTGCAGTGAAAGTTGTAATTTTTATGAGGTCAAATGTATTCTCTTACTCAGTAGCCTCTGGGTTTTGTATCAGCTTGGAGAGGACTTTTGCATGTTTAATT---TTCCTACCTTTTCTTCTGGTACTTTCATGACTTTTTAAAAttttatttttattttttttggaggcagagtctcgctccattctggagtgcagtggtgctctctcggctcactgcaaccttcccctcctagttcaag---------------- i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e calJac3.chr5 126503335 3786 + 159171411 I a score=842985.000000 s hg38.chr17_GL383566v1_alt 25434 463 + 90219 gcctcccaagtagctgggattacaggcacgtgccatgatgcccagctaatttttgtatctttagtagagacagggtttcactgcgttggccaggctggtctcgaactcaagtgatcctcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccTTCATGGCTTTATTTTTTTACACTGAAATCTCTGATGCATCTGGTGGGTTTTGTGTAAGGAGTGAGGTCGAGCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGTCTGCATGACAAAGCTTATGGCCAGCTCTTTGAAA--CTCTGGAGAAACCCTTTAGGGAACTGATGCTGGGTCTAGGGTGGGAAGGGCATC-GGGGTGGTGAGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCTGGGTGGCTGCCTGGGACAATTAGACAATTATGAGGAGTGT s panTro4.chr17 76220116 463 + 82630442 gcctcccaagtagctgggattacaggcacgtgccatgatgcccagctaatttttgtatctttagtagagacggggtttcactgcgttggccaggctggtctcgaactcaagtgatcctcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccTTCATGGCTTTATTTTTTTACACTGAAATCTCTGATGCATCTGGTGGGTTTTGTGTAAGGAGTGAGGTCGAGCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGTCTGCATGACAAAGCTTATGGCCAGCTCTTTGAAA--CTCTGGAGAAACCCTTTAGGGAACTGATGCTGGGTCTGGGGTGGGAAGGGCATC-GGGGTGGTGAGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGCCCGGCTGGGTGGCTGCCTGGGACAATTAGACAATTATAAGGAGTGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67317564 464 + 73212453 gcctcccaagtagctgggattacaggcacgtgccacgatgcccagctaatttttgtatctttagtagagacggggtttcaccgcgttggccaggctggtctcgaactcaagtgatcctcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccttcatggctttatttttttacaatgaaatctctgatgcatctggtgagttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCGTGACAAAGC-TATGGCCAGCTCTTTGAAACTCTCTGGAGAAACCCTTTAGGGAACTGATGCTGGGTCTGGGGTGGGAAGGGCATC-GGGGTGGTGAGAGGAGCCCCAGCAGATCACCAGAGAGGGCCAGGGCCGGCTGGGTGGCTGCCTGGGACAATTAGACAATTATAAGGAGTGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642297 466 - 94967081 gcctcccaagtaactgggattacaggcacgtgccacgatgcccagctaatttttgtatctttagtagagacagggtttcaccgcgttggccaggctggtctcgaactcaagtgaccctcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcacccagccttcatggctttatttttttacactgaaatctctgatgcatctggtgagttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCATGACAAAGCTTATGGCCAGCTCTTTGAAACCCTCTGGAGAAACCCTTTAGGGAACTGATGCTGGATCTGGGGTGGGAAGGGCATCAGGGGTGGTGAGAGGAGCCCCAGCAGATCACCAGAGAAGGCAAGGGCCGGCTGGGTGGCTACCTGGGACAATTAGACAATTATAAGGAGTGT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808119 458 + 80904711 gcctcccaagt-gctgggattacaggcacgtgccatgatgcccagataatttttgtatctttagtagagatggggtttcaccacgttggtcaggctggtctcgaactcaagtgatcctcccgctttggcctcccaaagtgctgggattacaggcgtgagccatcgcacccggccttcatggctttatttttttacattgaaatccctgatgcatctggtgggttttgtgtaaggagtgaggtcgagcttTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCATGACAAAGGTTATGGCCAGCTCTTTGAAACCCTCTGGAGAAACCCTTTAGGGAA------CTGGGTCTGGGGTGGGAAGGGCATCAGGGGTGGTGAGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCT-GGTGGCTGCCTGGGACAATTAGACAATTATAAGGAGTGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74616908 458 + 80997621 gcctcccaagt-gctgggattacaggcacgtgccatgatgcccagataatttttgtatctttagtagagatggggtttcaccacgttggtcaggctggtctcgaactcaagtgatcctcccgctttggcctcccaaagtgctgggattacaggcgtgagccatcgcacccggccttcatggctttatttttttacattgaaatccctgatgcatctggtgggttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCATGACAAAGGTTATGGCCAGCTCTTTGAAACCCTCTGGAGAAACCCTTTAGGGAA------CTGGGTCTGGGGTGGGAAGGGCATCAGGGGTGGTGAGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCT-GGTGGCTGCCTGGGACAATTAGACAATTATAAGGAGTGT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30677888 452 - 75148670 ------------gctgggattacaggcacatgccatgattcccagctaatttttgtttctttagtagagatggggtttcaccacattggtcaggctggtctcgaactcaagtgatcctcccgctttggcctcccaaagtgctgggattacaggcgtgagccaccgcacctggccttcatggctttatttttttacattgaaatctccgatgcatctggtgggttttgtgtaaggagtgaggtcgagCTTTTAATGAGTCCTAAATGGTCCTCTAGATTCAGTGCCTGCGTGACAAAGGTTATGGCTAGCTCTTTGAAACCCTCTGGAGAAACCCTTTAGGGAACCGATGCTGGGTCTGGGGTGGGAAGGGCATC-GGGGTGGTGAGAGGAGCCCCAGCAGATCACCAGGGAGGGCCAGGGCCGGCT-GGTGGCTGCCTGAGACAATTAGACAATTATAAGGAGTGT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624771 50 + 74645514 I a score=3710.000000 s hg38.chr17_GL383566v1_alt 25897 3 + 90219 GGT s panTro4.chr17 76220579 3 + 82630442 AGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318028 3 + 73212453 GGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642763 3 - 94967081 GGT i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74617366 3 + 80997621 GGT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678340 3 - 75148670 GGT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74808577 0 + 80904711 C e calJac3.chr5 126503335 3786 + 159171411 I e papAnu2.chr16 68624771 50 + 74645514 I a score=204573.000000 s hg38.chr17_GL383566v1_alt 25900 128 + 90219 ggccaggcgtggtggctcatgcccgtaatcccagtactctgggaggccaaagcgggtgcatcacctgaggttaggagttcgaggccagcctggccaacatggtgaaaactcctctctacaaaaaat--------ta s panTro4.chr17 76220582 128 + 82630442 ggccaggcgtggtggctcatgcccgtaatcccagtactctgggaggccgaagcaggtgcatcacctgaggttaggagttcgaggctggcctggccaacatggtgaaaactgctctctacaaaaaat--------ta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318031 128 + 73212453 ggctgggcgtggtggctcatgcctataatcccagtactgtgggaggctgaagcgggtgcatcacctgaggttaggagttcgaggccagcctggccaacatggtgaaaactcgtctctacaaaaaat--------ta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642766 128 - 94967081 ggccgggtgtggtggctcatgcctgtaatcccagtactctgggaggccgaagtgggtgcatcacctgaggttaggagttcgaggccagcctgggcaacatggtgaaaactcgtctctataaaaaat--------ta i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74617369 128 + 80997621 ggtcgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaagtgggtgtatcacctgaggttaggagttcgaggccagtctggccaacatggtgaaacctcatctctacaaaaaat--------ta i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678343 128 - 75148670 ggttgggcgtggtggctcatgcctgtaattccagcacttcgggaggccgaagtgggtgtatcacctgaggttaggagttcaaggccagcctggccaacatggtgaaacctcatctctacaaaaact--------ta i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507121 136 + 159171411 ggccgggcgcagtggctcacgcctgtaagcccagcactttgggaggttgaggtgggcggatcacttgaggtcaggagttcgagacccatttggccaacatggcaaactcctgtctctactaaaaatacaaaatgta i calJac3.chr5 I 3786 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e rheMac3.chr16 74808577 0 + 80904711 C e papAnu2.chr16 68624771 50 + 74645514 I a score=7294.000000 s hg38.chr17_GL383566v1_alt 26028 3 + 90219 gct s panTro4.chr17 76220710 3 + 82630442 gct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318159 3 + 73212453 gct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642894 3 - 94967081 gct i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808577 3 + 80904711 gct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617497 3 + 80997621 gct i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30678471 3 - 75148670 gct i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507257 3 + 159171411 gcc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I e papAnu2.chr16 68624771 50 + 74645514 I a score=431162.000000 s hg38.chr17_GL383566v1_alt 26031 160 + 90219 gggtgtggtgatgggcacctgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggaggcggaggttgcagtgagcggagatcacaccattgcactcaagcctgggcaacaagcgcgaaact--gtctccaaaag-aaaaaaaaaa--------GG s panTro4.chr17 76220713 165 + 82630442 gggtgtggtgatgggcacctgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggaggcggaggttgcagtgagcggagatcacaccattgcactcaagcctgggcaacaagcgcgaaactctgtctccaaaag-aaaaaaaaaa-----aaaGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318162 168 + 73212453 gggcatggtgat-ggcacctgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggaggcggaggttgcagtgaacggagatcacaccattgcactcaagcctgggcaacaagcgcgaaactctgtctccaaaag-aaaaagaaaa-aaaaaaaGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3642897 170 - 94967081 gggtgtggtgacgggcacttgtaatctcagctacttgggaggctgagacaggagaatcactcgaacctgggagacggaggttgcagtgagctgagatcacaccattgcactcaagcctgggcaacaagcgtgaaactctgtctccaaaag-aaaaaaaaaaaaaaaaaaGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808580 161 + 80904711 gggtgtggtgatgggcacctgtaatctcagttacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggtttcagtgagccgagatcgcaccataggactcaaacctgggcaac--gagcgaaactctgtctccaaaag-aaaaaaaaaa-------aGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617500 161 + 80997621 gggtgtggtgatgggcacctgtaatctcagttacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggtttcagtgagccgagatcgcaccataggactcaaacctgggcaac--gagcgaaactctgtctccaaaag-aaaaaaaaaa-------aGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624821 164 + 74645514 gggtgtggtgatgggcacctgtaatctcagttacttgggaggctgagacaggagaatcacttgaacctgggaggcagaggttgcagtgagccgagatcgcaccataggactcaaacctgggcaacaagagcgaaactctgtctccaaaagaaaaaaaaaaa-------agg i papAnu2.chr16 I 50 C 0 s chlSab2.chr16 30678474 162 - 75148670 gggtgtggtgatgggcacctgtaatctcagttactt-ggaggctgagacaggagaatcacttgaacttgggaggcagaggttgcagtgagctgagatcgcaccataggactcaaacctgggcaacaagagcgaaactccgtctccaaaag-aaaaaaaaaa-------aGG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507260 154 + 159171411 acacgcggtggcgtacac-ggtagttccagctacttgggaggctgaggcaggagaatcacttgaaccctggaggcagaagctgcagtgagtcaagatcatgccattgcactccagcctggacaacaagagcaaaactccatctccaaaaa---------aa-------aag i calJac3.chr5 C 0 C 0 e canFam3.chr9 57399299 3641 - 61074082 I a score=172428.000000 s hg38.chr17_GL383566v1_alt 26191 65 + 90219 AGTGTGGAAATAACCCAGGAATAAAAAAAACACAGTGCTAACATCACATTGTGTAGCCCCAGCGT s panTro4.chr17 76220878 61 + 82630442 AGTGTGGAAATAACCCAGGAATAAAA----CACAGTGCTAACATCACATTGTGTAGCCCCAGCGT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318330 61 + 73212453 AGTGTGGAAATATCCCAGGAATAAAA----CGCAGTGCTAACATCACATTGTGTAGCCCCAGCGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643067 61 - 94967081 AGTGTGGAAATATCCCAGGAATAAAA----CACAGTGCTAACAACACATTGCGTAGCCCCAGCGT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808741 61 + 80904711 AGTGTGGCAATATCCCAGGAATAAAG----CACAGTGCTAACATCACATTGCACAGCCCCAGCGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617661 61 + 80997621 AGTGTGGCAATATCCCAGGAATAAAA----CACAGTGCTAACATCACATTGCACAGCCCCAGCGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68624985 61 + 74645514 agtgtggcaatatcccaggaataaag----caCAGTGCTAACATCACATTGCACAGCCCCAGCGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30678636 61 - 75148670 AGTGTGGCAATATCCCAGGAACAAAA----CACAGTGCTAACATCACATTGCACAGCCCCAGCGT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507414 47 + 159171411 aGTGTGGAAATATCCTAGGAATA-------C----------CATCACCTTGCAGAGCCCCA-CAG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57402940 56 - 61074082 AGTGTTGAAATAGCGCAGGAATAAAT----TGCAGCACTAATGCCA-----GGCAGGCCCGGCGT i canFam3.chr9 I 3641 I 25 a score=45696.000000 s hg38.chr17_GL383566v1_alt 26256 14 + 90219 GAAGGGGTTTTTGG s panTro4.chr17 76220939 14 + 82630442 GAAGGGGTTTCTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318391 14 + 73212453 GAAGGTGTTTCTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643128 14 - 94967081 GAAGGGGTTTCTGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808802 14 + 80904711 GAAGGGGTTTCTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74617722 14 + 80997621 GAAGGGGTTTCTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68625046 14 + 74645514 GAAGGGGTTTCTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30678697 14 - 75148670 GAAGGGGTTTCTGG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507461 14 + 159171411 GAAGGGGTTTCTGG i calJac3.chr5 C 0 C 0 e canFam3.chr9 57402996 25 - 61074082 I a score=1386143.000000 s hg38.chr17_GL383566v1_alt 26270 426 + 90219 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACATGACAAGAG-TCTTTTCTGAGGCACCTTGTCTGC-GGC--ACAGCTGCCTGGGTG---------------------CCCGAGGAACAGCCCTGTGTCAGCATTTAGTCCGCTGAAACATGCAGCTAAATAACCAGCCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCGTGTGTTTTTGGCCAGTGCCATTTCCGGGCCCCTGGAGTTGATGGACATTTCCTGTGCGGGGTCTGATT-CCCACTACAGATTTGAAAGAGGCATG s panTro4.chr17 76220953 426 + 82630442 CCACCACAGGGAGCAGAATGTCCTCTGGTGGACATGACAAGAG-TCTTTTCTGAGGCACCCTGTCTGC-GGC--ACCGCTGCCTGGGTG---------------------CCCGAGGAACAGCCCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAGCCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAGCATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCATAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCATGTGTTTTTGGCCAGTGCCATTTCCGGGCCCCTGGAGTTGATGGACATTTCCTGTGCGGGGTCTGATT-CCCACTACAGATTTGAAAGAGGCATG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318405 427 + 73212453 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACATGACAAGAG-TCTTTTCTGAGGCGCCCTGTCTGT-GGC--ACAGCTGCCTGGGTG---------------------CCCGAGTAACACCCCTGTGTCAGCATTTAGTCCGTTGGAACACGCAGCTAAGTAACCAACCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACTGCCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCCGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCGTGTGTTTTTGGCCAGTGCCATTTCCGGGCCCCTGGAGTGGATGGACATTTCCTGTGCGGGGTCTGATT-CCCACTACAGATTTGAAAGAGGCATG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643142 426 - 94967081 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACATGACAAGGG-TCTTTTCTGAGACGCCCTGTCTGT-GGC--ACAGCTGCCTGGGTG---------------------CCCGAGTAACACCCCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGACACATTCTTCCGGAAACCAGCTCGGCTCTGCCAGGCATGTGTTTTTGGCCAGTGCCATTTCCAGGCCCCTGGAGTTGACGGACATTTCCTGTGTGGGGTCTGATT-CCCACTACAGCTTTGAAAGAGGCATG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74808816 425 + 80904711 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACGTGACAATGG-TCTTTTCTGAGGCGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCTGGGTAACA--CCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCTGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCTGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACCGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGAGGCATG i rheMac3.chr16 C 0 I 298 s macFas5.chr16 74617736 425 + 80997621 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACGTGACAATGG-TCTTTTCTGAGGCGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCTGGGTAACA--CCTGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCTGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGTGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCCGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACCGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGAGGCATG i macFas5.chr16 C 0 I 298 s papAnu2.chr16 68625060 425 + 74645514 CCACCACAGGGAGCAGAATGTCCTTTGGTGGATGTGACAATGG-TCTTTTCTGAGGCGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCCGGGTAACA--CCCGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCCGAGAacaagtgatttatttttattgcttcatttttaaaCACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCCGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACTGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGAGgcatg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30678711 425 - 75148670 CCACCACAGGGAGCAGAATGTCCTTTGGTGGACGTGACAGTGG-TCTTTTCTGAGGTGCCTTGTCTGCAGGC--ACAGCTGCTTGGGTG---------------------CCCGGGTAACA--CCCGTGTCAGCATTTAGTCCGTTGAAACATGCAGCTAAATAACCAACCGGCTGTCTTCCGAGAACAAGTGATTTATTTTTATTGCTTCATTTTTAAACACT-TCAACATGCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCATAAGAGAAAGCTGAAGAGAAAATGCAAGCTGGAGAAAAGTGGGGA-TGCTTTGCTGAGACATCCTTCCGGAAACCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCACTGTCATTTCTGGGCCCCTAGAGGTGATGGACATTTCCTGTGCAGGGTCTGATT-CCCACCACAGATTTGAAAGGGGCATG i chlSab2.chr16 C 0 I 298 s calJac3.chr5 126507475 415 + 159171411 CCACCGCAGGCAGCAGAATGTCCTTTGGTGGATGTGACAAGGG-TCTTTTCTGAGGCACCCTGTCTGCAG----------GCCCGGGGG---------------------CCTGGGTAACA-CCCTGTGTCAGCTTTTGGTCAGTTGAAACACGCAGCTAAATAACCAACTGGCTGTCTTCCAAGAATAAGTGATTTATTTTTATTGCATCATTTTTAAACGCT-TCAACATTCCTCCCAAGAAGCTGTGTGGTTTGGAAAAGCGTAAGAGGAAGCTGAAGAGAAAATGCGAGCTGGAGAAGAGTGGGGC-TGCTTTGCTGGAATGTTCTTCCGGAAAGCAGCTCGGCTCTGCCAGGCACGTGTTTTTGGCCAGCATTGTGTCTGGGCCC--AGAGATGATGGACGTTTCCTGTGCAGGGTCTGATT--CCACTGTGGATTTGAAAGAGGCATG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57403021 422 - 61074082 CCACTGCAGCCA--AGAGGGGCCTCGCGTGGACCCGAAGAGGGCTCTTCCCCGTGGGACCGTGTCCCCGGGCCTGCTGCTGCCTGCGCAGGTTGTGCAGCTCGCAGGCCCTCCCGTCAGCATTCCCAGGTCAGCATTTATTCAGCAGAAACATGCAGCCTAATAACCAACAGGCTGTCTTCCGAGAACAAGTGATTTA-TTTTATTGCCTCATTTTTAAACACT-TCAGCGTGCCTCCCAAGAAGCTGTTTGGTTTGGAAAGTCAC------------AAGAGAAGATGCAAACTG-----AAGTGGGGAGCACTTCTCTG---CACTTGCCGGGGACGCCAGCCTGCTCTGCGGGAAGGGTG-----GGGGAGCGGC-CGTCGGGGCCGCTGGACTTGGCGGAC-CATCCTGCTTGGGCTCTGACTCCCCAGTGAAGGTCTGAAACA-GCACA i canFam3.chr9 I 25 C 0 a score=51883.000000 s hg38.chr17_GL383566v1_alt 26696 18 + 90219 CAGATTTTTATTTTAAAA s panTro4.chr17 76221379 18 + 82630442 CAGATTTTTATTTTAAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318832 18 + 73212453 CAGATTTTTATTTTAAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643568 18 - 94967081 CAGATATTTATTTTAAAA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74809539 18 + 80904711 CAGATTTTTATTTTAAAA i rheMac3.chr16 I 298 C 0 s macFas5.chr16 74618459 18 + 80997621 CAGATTTTTATTTTAAAA i macFas5.chr16 I 298 C 0 s papAnu2.chr16 68625485 18 + 74645514 cagattttttttttgaga i papAnu2.chr16 C 0 I 495 s chlSab2.chr16 30679434 18 - 75148670 CAGATTTTTATTTTAAAA i chlSab2.chr16 I 298 C 0 s calJac3.chr5 126507890 18 + 159171411 CAGATTTTTATTCTTAAA i calJac3.chr5 C 0 C 0 s canFam3.chr9 57403443 18 - 61074082 TGGGTTGTTGTGAAAAGG i canFam3.chr9 C 0 C 0 a score=12349.000000 s hg38.chr17_GL383566v1_alt 26714 7 + 90219 AAACTAA- s panTro4.chr17 76221397 7 + 82630442 ATACTAA- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318850 7 + 73212453 AAACTAA- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643586 7 - 94967081 AAACTAA- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74809557 7 + 80904711 AAACTAA- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74618477 7 + 80997621 AAACTAA- i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30679452 7 - 75148670 AAACTAA- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126507908 7 + 159171411 CAACTCA- i calJac3.chr5 C 0 C 0 s canFam3.chr9 57403461 7 - 61074082 -AAATAAA i canFam3.chr9 C 0 I 431 e papAnu2.chr16 68625503 495 + 74645514 I a score=400763.000000 s hg38.chr17_GL383566v1_alt 26721 173 + 90219 ATAGAACCTGGtagccagacatggtggcgcgagcctgcagtctcagctacttatgagactgaggtggaagaatcgcttgagcccaggatgtggaggttgtagcgagccaagattgcagcactgcactccagcctaggtgacagaacaagagaccctctctcaaaaaacaaaca---- s panTro4.chr17 76221404 173 + 82630442 ATAGAACCTGGtagccagacatggtggcgcgagcctgcagtctcagctacttgtgagactgaggtggaagaatcgcttgagcccaggatgtggaggttgtagcgagccaagattgcagcactgcactccagcctaggtgacagaacaagagaccctgtctcaaaaaacaaaca---- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67318857 173 + 73212453 AAAGAACCTGGtagccagacatggtggcgcgagcctgcagtctcagctacttgtgagactgaggtgggagaaacgcttgagcccaggacgtggaggttgtagtgagccaagattgcagcactgcactccagcctaggtgacagaacaagagaccctgtctcaaaaaacaaaca---- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643593 173 - 94967081 ATAGAACCTGGtagccagacgtggtggcgcgagcctgcagtctcagctacttgtgagactgaggtggaggaatcgcttgagcccaggacgtggaggttgtagtgagccaagattgcagcactgcactccagcctgggtgacagaacaagagaccctgtctcaaaGCACAAACA---- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74809564 173 + 80904711 ATAGAACATGGtagccagatatggtggcacaagcctgcagtctcaggtacttgtgaggctgagctgggagaatcgcttgagcccaggacgtggaggttgcagtgagacaagattgcagtactgcactccagcctaggtgacagaacaagagaccctgtctcaaaaaacaaaca---- i rheMac3.chr16 C 0 I 20 s macFas5.chr16 74618484 173 + 80997621 ATAGAACATGGtagccagatatggtggcacaagcctgcagtctcaggtacttgtgaggctgagctgggagaatcgcttgagcccaggacgtggaggttgcagtgagccaagattgcagtactgcactccagcctaggtgacagaacaagagaccctgtctcaaaaaacaaaaa---- i macFas5.chr16 C 0 I 4 s chlSab2.chr16 30679459 173 - 75148670 ATAGAACATGGtagccagatatggtggcacaagcctgcagtctcaggtacttgtgaggctgagctgggagaatcgcttgagcccaggacgtggaggttgcagtgagccaagattgcagcactgcactccagcctaggtgacagaacaagagaccctgtctcaaaaaacaaaca---- i chlSab2.chr16 C 0 I 20 s calJac3.chr5 126507915 177 + 159171411 ATAGAATGTTGtagccagacttggtggcgagagcctgtagtctcagctactagtgaggctgaggtgggagaatcccttgagcccaggacgtggaggttgcagtaatccaagatcatgccactgcactccagcctaggtgacagaacgagacaccctgtctcaaaaaacaaaCAGGCA i calJac3.chr5 C 0 C 0 e canFam3.chr9 57403468 431 - 61074082 I e papAnu2.chr16 68625503 495 + 74645514 I a score=18193.000000 s hg38.chr17_GL383566v1_alt 26894 16 + 90219 ggctgggcatggtggc s panTro4.chr17 76221577 16 + 82630442 ggctgggcatggtggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319030 16 + 73212453 ggctgggcatggtgac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643766 16 - 94967081 ggctgggcatggtgac i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74618661 16 + 80997621 TGCCGGGCGTGGTAGC i macFas5.chr16 I 4 C 0 s calJac3.chr5 126508092 16 + 159171411 ggctggacacggtggc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57403468 431 - 61074082 I e rheMac3.chr16 74809737 20 + 80904711 I e chlSab2.chr16 30679632 20 - 75148670 I e papAnu2.chr16 68625503 495 + 74645514 I a score=78546.000000 s hg38.chr17_GL383566v1_alt 26910 103 + 90219 tcatgcccataatcccagcagtttgggagactgagacaggtgcatcacctgaggtcaggaattcgagaccagcctggccaacatggcgaaa-ccccctctacta s panTro4.chr17 76221593 104 + 82630442 tcatgcccataatcccagcagtttgggagactgagacaggtgcatcacctgaggtcaggaattcgagaccagcctggccaacatggcgaaacccccctctacta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319046 103 + 73212453 tcatgcccataatcccagcactttgggaggctgagagaggtgtatcacctgaggtcaggaattcgagaccagcctgaccaacatagcgaaa-ccccctccacta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3643782 103 - 94967081 tcatgcccataatcccagcagtttgggaggctgaggcaggtggatcacctgagatcaggaattcgagaccagcctggccaacatggcgaaa-ccccctctatta i nomLeu3.chr14 C 0 I 311 s calJac3.chr5 126508108 96 + 159171411 ------ttacaatcccagcagtttgggaggctgaggc-ggtgcatcacttgaggtcaggaatttgagaccaacctggccaacattgcaaaa-ctgtctctacta i calJac3.chr5 C 0 C 0 e canFam3.chr9 57403468 431 - 61074082 I e rheMac3.chr16 74809737 20 + 80904711 I e chlSab2.chr16 30679632 20 - 75148670 I e papAnu2.chr16 68625503 495 + 74645514 I e macFas5.chr16 74618677 0 + 80997621 C a score=3276.000000 s hg38.chr17_GL383566v1_alt 27013 6 + 90219 aaaata s panTro4.chr17 76221697 6 + 82630442 aaaata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319149 6 + 73212453 aaaata i ponAbe2.chr17 C 0 C 0 s calJac3.chr5 126508204 6 + 159171411 aaaata i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3643885 311 - 94967081 I e canFam3.chr9 57403468 431 - 61074082 I e rheMac3.chr16 74809737 20 + 80904711 I e chlSab2.chr16 30679632 20 - 75148670 I e papAnu2.chr16 68625503 495 + 74645514 I e macFas5.chr16 74618677 0 + 80997621 C a score=49761.000000 s hg38.chr17_GL383566v1_alt 27019 69 + 90219 caaaaattagccaggcgtggtggcaggcgcctgtaatcccagctgctcaggaggctgaggcaggagaat s panTro4.chr17 76221703 69 + 82630442 caaaaattagccaggcgtggtggcaggcgcctgtaatcccagctgctcaggaggctgaggcaggagaat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319155 69 + 73212453 caaaaattagccaggcatggtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644196 69 - 94967081 caaaaattaaccagacgtgggggcagacgcctgtaatcccagctactcgggaggctgaggcaggagaat i nomLeu3.chr14 I 311 C 0 s calJac3.chr5 126508210 62 + 159171411 -------cagccgggtgtggtgactcaagcctgtaatcccagcactttgggaggctgaggcaggtggat i calJac3.chr5 C 0 I 1148 e canFam3.chr9 57403468 431 - 61074082 I e rheMac3.chr16 74809737 20 + 80904711 I e chlSab2.chr16 30679632 20 - 75148670 I e papAnu2.chr16 68625503 495 + 74645514 I e macFas5.chr16 74618677 0 + 80997621 C a score=321996.000000 s hg38.chr17_GL383566v1_alt 27088 662 + 90219 tgattgaacctgggaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacaagaccgaaactgcgtctcaagaaaaa-aacaaaaaacaaaacaaaagccca----aaacaaaaaacccaaaat-aaaaAAAACAAACTAAAGAATATTGGTTTTTCTGTCTCTCAAAATATGTAGTGAACATCTCTCAATCTAAGGGGCATTGTAGTGTTAGCCAGCTGAGGTAAAAAGGCAAGACCCATTCGTCTCCAAGTGTCCTAGCTGGGGCTCTTAAAGAACCAGCAAggccaggtgcagtggctcatgcctgtaatcacagcactttggaaggccaaggtgggaggatcatttgagcccaggagttcaagaccaacctgggcaacatagggagactttgtcgctaccaaaaaaatacaaaaaaattagccggccatggtggcatatgcctgtagtcccagctatttgggaggctgaggtgggaggattgcttgagcctgggaggtcaaggctgcagggagctgtgatggcaccactgcactccagagagagaccctgtgtcaaaaaagaa----agaaagaaggaaggaaaaT------gaaggaaggaaaaaaaaggaaggaaagaaaggagag-------------------agaaagaaaagagagagaaagaaaacag s panTro4.chr17 76221772 632 + 82630442 tgattgaacctgggaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacaagaccgaaactgcgtctcaagaaaaa-aacaaaaaacaaaacaaaaaccca----aaacaaaaaacccaaaataaaaAAAAACAAACTAAAGAATATTAGTTTTTCTGTCTCTCAAAATATGTAGTGAACATCTCTCAATCTAAGGGGCATTGTAGTGTTAGCCAGCTGAGGTAAAAAGACAAGACCCATTTGTCTCCAACTGTCCTAGCTGGGGCTGTTAAAGAACCAACAAggccaggtgcagtggctcatgcctgtaatcacagcactttggaaggccaaggtgggaggatcatttgagcccaggagttcaagaccagcctgggcaacatagggagactttgtctctaccaaaaaaatacaaaaaaatcagccgggcatggtggcatatgcctgtagtcccagctatttgggaggctgaggtgggaggattgcttgagcctgggaggtcaaggctgcagggagctgtgatggcaccactgcactccagagagagaccctgtgtcaaaaaagaa----agaaagaaggaaggaaaaT------gaaggaag------------------------------------------------gaaagaaaggagagagaaagaaaac-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319224 665 + 73212453 tgattgaacctgggaggcagaggttgcagtgagccgagattgtgctactgcactccagcctgggtgacaagaccaaaactgtgtctcaagaaaaa-aacaaaaaacaaaacaaaaacccaaaacaaacaaaaaaCCCAAAAT-AAAAAAAACAAACTAAAGAATATTGGTTTTTCTGTCTCTCAAAATATGTAGTGAACATGTCTCGATCTAAGGGGCATTGTAGTGTTAGCCAGCTGAGGTAAAAAGACAAGACCCATTCGTCTCCAAGTGTCCTAGCTGGGGCTCTTAAAGAACCAACAAggccaggtgcagtggctcatgcctgtaatcacagcactttggaaggccaacgtgggaggatcacttgagcccaggagttcaagaccagcctgggcaacatagggagactttgtctctaccaaaaaaatacaaaaaaattagccgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggtgggaggattgcttgagcctgggaggtcaaggctgcagggagctgtgatggcaccactgcactccagagagagaccctgtgtcaaaaaagaa--agagaaagaaggaaggaaaat------aaaggaaggaaggaagggaaaaaaaaaagaaggaag--------------------gaaagaaaggagagagaaagaaaAC-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644265 691 - 94967081 tgcttgaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgagtgacaagactgaaactgcatctcaataaaaacaaaacaaaacaaaacaaaaaCCCA----AAACAAACAACCCAAAAT--AAAAAAACTAACTAAAGAATATTGGTTTTTCTGCCTCTCCAAATGTGTAGTGAATATCTCTCGATCTAAGGGGCATTGTCGTGTTAGCCAGCTGAGGTAAAAAGACAAGACCCATCCGTTTCCAAGTGTCCTAGCTGGGGCTCTTAAAGAACCAACAAggccaggtgcagtggctcatgcctgtaatcacagaactttggaaggccaaggcgggaggatcatttgagctcaggagttcaagaccagcctggacaacatagggagactttgtctctaccaaaaaaatacaaaaaaattagctgggcattgtggcatacacctgtagtcccagctatttgggaggctgaggcgggagggttgcttgagcctgggaggtcaaggctgcagggagctgtgatggcgccactgcactccagagagagaccctgtctcaaaaaagaaagagagaaagaagcaaggaaaATAAaaaggaaggaaggaaaaaaaagaaggaaaagaaaaagaaggaaggaaggaaagaaagagagaaagaaaagagagagaaagaaaacag i nomLeu3.chr14 C 0 C 0 e canFam3.chr9 57403468 431 - 61074082 I e rheMac3.chr16 74809737 20 + 80904711 I e calJac3.chr5 126508272 1148 + 159171411 I e chlSab2.chr16 30679632 20 - 75148670 I e papAnu2.chr16 68625503 495 + 74645514 I e macFas5.chr16 74618677 0 + 80997621 C a score=590336.000000 s hg38.chr17_GL383566v1_alt 27750 773 + 90219 aagagaaaagaggctgggtgcagtggctcatgcctgtaatcccagcactttgggaggctgatgcgggcggatcacctgaggtcaggagttcaagaccagcctggccaacgtggcgaaaccccatctgtactaaaaatacaaaaattagctaggcatggtggcaggcgcctataatcctagctactagggaggctgaggc---agaattgcttgaacccaggaggcagaggttgcagtgagccaagatcacaccactgcattccagcctgggtgacagagcaagactacgtctcaaaa-------aaaaaaaaaaaaaaaaaaaaaggaaaagaaagaaagaGACTGATTTAGtgatttagtttggctctatgttcccacccaagtctcatctccaattgtgatccccataattcccatgtgttgaaggggggacctggtgggaggtgattgggtcatggcagcgg-ttcccctatacc----gttcccgagatagtgagtgagttctcagatgatctgatggttttataagggcctcttcctccttcgctcattcactctctcttgcctgctgccatgtaagacatgcctttgcttctctcttgctttctgccatgattgtaagtctcatgaggcctccccagccatgtggaactgtgagtcaattaaacctctttcctttataaattacccagtgtcaggtatttctttagagcagtgtgagaacggactcatacaGAAACCAAAAAGAAGGCAGAATGGAGGAAAGACAGCAGGTCCAGGACTTGG s panTro4.chr17 76222404 758 + 82630442 aagagaaaagaggctgggtgcagtggcttatgcctgtaatcccagcactttgggaggctgatgcgggcagatcacctgaggtcaggagttcaagaccagcctggccaacgtggcgaaaccccatctgtactaaaaatacaaaaattagctaggcatggtggcaggcgcctataatcctagctactagggaggctgaggc---agaattgcttgaacccaggaggcagaggttgcagtgagccgagatcacaccactgcattccagcctgggtgacagagcaagactacgtctc-----------------aaaaaaaaaaaaaaaggaaaagaaagaaagagac--------tgatttagtttggctctatgttcccacccaaatctcatctccaa-tgtaatccccataattcccatgtgttgaaggggggacctggtgggaggtgattgggtcatggcagcgg-ttcccccataccggtagttcaagagatagtgagtgagttctcagatgatctgatggttttataagggcctcttcctccttcgctcattcactctctcttgcctgctgccatgtaagacatgcctttgcttctctcttgctttctgccatgattgtaagtctcatgaggcctccccagccatgtggaactgtgagtcaattaaacctctttcctttataaattacccagtgtcaggtatttctttagagcagtgtgagaacggactcatacagaaaccaaaaagaaggcagaatggaggaaagacagCAGGTCCAGGACTTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67319889 749 + 73212453 ---AGAAAAGAggctaggtgcagtggctcttgcctgtaatcccagcacttcgggaggctgatgcgggcggatcacctgaggtcaggagttcaagaccagcctggccaatgtggcgaaaccccgtctgtactaaaaatacaaaaattagctaggcatggtggcaggtgcctgtaatcctagctactagggaggctgaggc---agaattgcttgaacccaggaggcagaggttgcagtgagccgagatcacaccactgcattccagcctgggtgacagagcaagactacatctc---------------aaaaaaaaaaaaaaaaaaaaaaggaaagaaAGACAC--------tgatttagtctggctctgtgttcccacccaa-----atctccaattgtaatccccataattcccacgtgttgaaggggggacctgctgggaggtgattgggtcatggtggcag-ttcctccatact----gttcccgagatagtgagtgagttctcagatgatctgatggttttataagggcctcttcctcctttgctcattcactctctcttgcctgctgccatgtaagacatgcctttgcttctctcttgctttctgccatgattgtaagtctcatgaggcctccccagccatgtggaactgtgagtcaattaaacctctttcctttataaattacccagtgtcaggtatttctttagagcagtgtgagaatggactcatacaGAAACCAAAAAGAAGGCAGAATGGAGGAAAGACAGCAGGTCCAGGACTTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3644956 765 - 94967081 aaaagaaaagaggctgggcgcagtggctcatgcccgtaatcccagcactttgggaggctgttgtgggcggatcacctgaggtcaggagttcaagaccagcctggccaacgtggcgaaaccctgtctgtactaaaaatacaaaaattagccaggcatggtggcaggcgcctataatcctagctactcgggaggctgaggc---agaatcgcttgaacccaggaggcagaggttgcagtgagccgagatcacaccactgcattccagcctgggtgacagagcaagactccgtcccaaaa-------aataataataataataataataataggaaaagaaagaCAC--------tgatttagtttggctctgtgtccccacccaaacctcatctccaattgtaatccccataattcccatgtgttgaaggggggacctggtgggaggtgaccgggtcatggcggtgg-ttcccccatact----gttcccaagataatgagtgagttctcagatgatctgatggttctataagggcctcttcctccttcgctcattcactctctcttgcctgctgccatataagacatgcgtttgcttctctcttgctttctgccgtgattgtaagtctcatgaggcctccccagctatgtggaactgtgagtcaattaaacctctttcctttataaattacccagtgtcaggtatttctttagagcagtgtgagaacggactcatacagaaaccaaaaagaaggcagaatggaggacagacagCAGGTCCGGGACTCGG i nomLeu3.chr14 C 0 C 0 s calJac3.chr5 126509420 771 + 159171411 AAGAACCAACAAgctgggctcggtggctcacacctataatcccagcactttggaaggctgaggtgggtagatcacctgaggttaggagttcaagaccagcctggccaacatggcaaaaccc-gtctctactaaaaatacaaaaattagatgggcatggttgcaggcacctgtaatcccagttactagggaggctgagacaggagaatcgcttgaacccaggaggcggagatggcagtgagcagagatcacaccactgcactccagcctgggcaacagagcaagagtcagttaaaaaaagagaacaaaagaggaaaggaaaGGAAAAAGGGAGGAAGGGAGGAAC--------tgatttagcttggctttgtgtccctacccaaatcttatctcccatgttaatccccatcacccccaggtgtcaggagtgggacctggtgggaggtgattgaatcatgagggtggtttcctccat-------gttcccaagatagtgagagagttctcaggcaatctgatggctttataagggcctcttcccccttcgctcattcactttctcttgtctgctgccatgtaagacatgcctttccttctctctcaccctctgccatgattgtaagcttcctgaggcctccccagccatgt-gaactgtgagtgaattgaacctctttcctttataaattacccagcgtcaggaatttctttagagcagtgtgagaacggactcataTGGAAACCAAAAGAAAGGCTGGATGGAGGAAAGAGGGCAGGTCCAGGACTTGG i calJac3.chr5 I 1148 C 0 e canFam3.chr9 57403468 431 - 61074082 I e rheMac3.chr16 74809737 20 + 80904711 I e chlSab2.chr16 30679632 20 - 75148670 I e papAnu2.chr16 68625503 495 + 74645514 I e macFas5.chr16 74618677 0 + 80997621 C a score=1443741.000000 s hg38.chr17_GL383566v1_alt 28523 521 + 90219 TCACCTTGATGCCCCAGTGTGACCTTTTGTCCCACTGAGTTCCCAGCGCTGGCTGTCACATGCTCAGGGCTCAGCCATCTGCTCCTCATGCAATCTCCAGTGTTTGCAGAGCAGGAGGATGTTTCCAAGGAAATCCTACTGGAATATCACCAGAGTTCCCTGGAAGGCATCAGGGACAGTGGTGAGCTTGGCAGTGAGCCTTCTCCACCTCCCTAGTTCAGGTCCTGCCCACCGAGAGTTAGGGACGGTCTTGGTGCTGTTGGGCCGTCCTGACCACCGTGGCAGCCAGCAATGGGCTGGGTTTGTCTATGGCAggtttctcagcaggcacggctgacatgctgtgcagggtcattctctgcg---gggggagccgtcctgtgtgcactctaggatgtttagcagcgtctctggcctctacccaccagatgccactagcacccacccagctgtgacaaccaacaatgtctccagacactg-------------------tttttttttttttgttttttcaagacggagtcttgctctgtcac s panTro4.chr17 76223162 517 + 82630442 TCACCTTGATGCCCCAGTGTGACCTTTTGTCCCACTGAGTTCCCAGCGCTGGCTGTCACATGCTCAGGGCTCAGCCACCTGCTCCTCATGCAATCTCCAGTG-TTGCAGAGCAGGAGGATGTTTCCAAGGAAATCCTACTGGAATATCACCAGAGTTCCCTGGAAGGCATCAGGGACAGTGGTGAGCCTGGCAGTGAGCCTTCTCCACCTCCCTAGTTCAGGTCCTGCCCACCGAGAGTTAGGGACGGTCTTGGTGCTGTTGGGCCGTCCTGACCACCGTGGCAGCCAGCAATGGGCTGGGTTTGTCTATGGCAggtttctcagcaggcgcggctgccgtgctgtgcagggtcattctctgcg---gggggagccgtcc--tgtgcactgtaggatgtttagcagcatctctggcctctacccaccagaggccactagcacccacccagctgtgacaaccaacagtgtctccagacactg-------------------gtttttttttttc-ttttttcgagacggagtcttgctctgtcac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67320638 520 + 73212453 TCACCTTGATGCCCTAGTGTGACATTTTGTCCCACTGAGTTCCCAGCACTGGCTGTCACATGCTCAGGGCTCAGCCACCTGCTCTTCATGCAATCTCCAGTGTTTGCAGAGCAGGAGGATGTTTCCAAGGAAATCCTACTGGAATATCACCAGAGTTCCCTGGAAGGCATCAGGGACAGTGGTGAGCTTGGCCGTGAGCCTTCTCCACCTCCCTAGTTCAGGTCCTGCCCACCGAGAGTTAGGGACGGTCTTGGTGCTGTTGGGCCGTCCTGACCACCGTGGCAGCCAGCAATGGGCTGGGTTTGTCTATGGCAggtttctcagcaggcactgctgatgtgctgcgcagggtcattctctgggagagggggagctgtcc--tgtgcactgtagggtgtttagcagcatctctggcctctacccaccagatgccactagcacccacatagctgtgacaaccaacaatatctccagacactg-------------------ttttttttttct--tttttttgagacggagtcttgctctgtcac i ponAbe2.chr17 C 0 I 453 s nomLeu3.chr14 3645721 512 - 94967081 TCACCTTGATGCCCTAGTGTGACATTTTGTCCCACTGAGTTCCCAGCGCTGGCTGTCACATGCTCAGGACTCAGCCACCTGCTCCTCACACAATCTCCAGTGTTTGCAGAGCAGGAGGATGCTTCCAAGGGAATCCTACTGGAATATCACCAGGGTTCCCTGGAGGGCATCAGGGACAGTGGTGAGCTTGGCAGTGAGCCTTCTCCACCTCCCTAGTTCAGGTCCTGCCCACCGAGAGTTAGGGACGGTCTTGGTGCTGTTGGGCCGTCCTGACTACCGTGGCAGCCAGCAATGGGCTGGGTTTGTCTATGGCAggtttctcggcaggcactgctgatgtgctgcgcagggtcattctctgtg---gggggagctgtcc--tgtgcactgtacgatgtttagcagcatctctggcctctacccaccagatgccactagcacccacccagctgtgacaaccaacaatgtct-cggacac------------------------tttttttttc-tttttttgagatggagtcttgctctgtcac i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74809757 506 + 80904711 TCACCTTGATGCCCCAGTGTGACATTTTGTCCCACTGAGTTCCCAGCGCTGGCTGTCATGTGCTCAGGGCTCAGCCAACTGCTCCTCATGCAATCTCCAGTGTTTGCAGAGCAGGAGGATGTTTCCAAGGTAATCCTACTGGAATATCACCAGAGTTCCCTGGAAGGCATCAGGGACAGTGGTGAGCTTGGCAGTGAGCCTTCTCCACCTCCCTAGTTCAAGTCCTGCCCATCGAGAGTTAGGGATGGTCTTGGTGCTATTGGGCTGTCCTGACCA-GGTGGCAGCCAGCAATGGGCTGGGTTTGTTTATGGCACATTTATCAGCAggcactgctgatgtgctacacagggtcattatctgtg---ggaggagctgtcc--tgtgcactgtaggatgtttagcagcatctctggcctctaccgaccagataccactagcacccac-------------ccatcaatgtttccagacactg-----------------tttttttttttcttc-tttttttgagatgcagtctcgttctgttac i rheMac3.chr16 I 20 C 0 s macFas5.chr16 74618677 497 + 80997621 TCACCTTGATGCCCCAGTGTGACATTTTGTCCCACTGAGTTCCCAGCGCTGGCTGTCATGTGCTCAGGGCTCAGCCAACTGCTCCTCATGCAATCTCCAGTGTTTGCAGAGCAGGAGGATGTTTCCAAGGTAATCCTACTGGAATATCACCAGAGTTCCCTGGAAGGCATCAGGGACAGTGGTGAGCTTGGCAGTGAGCCTTCTCCACCTCCCTAGTTCAAGTCCTGCCCATCGAGAGTTAGGGATGGTCTTGGTGCTATTGGGCTGTCCTGACCA-GGTGGCAGCCAGCAATGGGCTGGGTTTGTTTATGGCACATTTATCAGCAggcactgctgatgtgctacacagggtcattatctgtg---ggaggagctgtcc--tgtgcactgtaggatgtttagcagcatctctggcctc-----------taccactagcacccac-------------ccatcaatgtctccagacactg---------------tttttttttttttcttc-tttttttgagatgcagtctcgttctgttac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68625998 510 + 74645514 tcaccttGATGCCCCAGTGTGACATTTTGTCCCACTGAGTTCCCAGCACTGGCTGTCATGTGCTCAGGGCTCAGCCAACTGCTCCTCATGCAATCTCCAGTGTTTGCAGAGCAGGAGGATGTTTCCAAGGGAATCCTACTGGAATATCACCAGAGTTCCCTGGAAGGCATCAGGGACAGTGGTGAGCTTGGCAGTGAGCCttctccacctccctagttcaagtccTGCCCATCAAGAGTTAGGGATGGTCTTGGTGCTATTGGGCTGTCCTGACCACGGTGGCAGCCGGCAATGGGCTGGGTTTATTCATGGCACATTTCTCAGCAGGCACTGCTGATGTGCTACACAGGATCATTATCTGTG---GGaggagctgtcc--tgtgcactgtaggatgtttagcagcatctctggcctccacTGACCAGATGCCACTAGCACCCAC-------------CCAtcaatgtctccagacactg--------------ttttttttttttttcttc-tttttttgagatggagtctcgttctgttac i papAnu2.chr16 I 495 C 0 s chlSab2.chr16 30679652 517 - 75148670 TCACCTTGATGCCCCGGTGTGGCCTTTTGTCCCAATGAGTTCCCAGGGCTGGCTGTCATGTGCTCAGGGCTCAGCCAACTGCTCCTCATGCAATCTCCAGTGTTTGCAGAGCAGGAGGATGTTTCCAAGGGAATCCTACTGGAATATCACCAGAGTTCCCTGGAAGGCATCAGGGACAGTGGTGAGCTTGGCAGTAAGCCTTCTCCACCTCCCTAGTTCAAGTCCTGCCCATCAAGAGTTAGGGACGGTCTTGGTGCTATTGGGCTGTCCTGACCACGGTGGCAGCTGGCAATGGGCTGGGTTTGTTCATGGCACAtttctcagcaggcactgctgatgtgctacacagggtcattatctgtg---ggaggagctgtcc--tgtgcactgtaggatgtttagcagcatctctggcctctaccgaccagatgccactagcacccac-------------ctatcaatgtctccagacactgttttttt-------ttttttttcttcttcttc-ttattttgagatggagtctcgctctgttac i chlSab2.chr16 I 20 C 0 s calJac3.chr5 126510191 531 + 159171411 TCACGTTGATGCCACAATGTGACATTTTGTCCCACGGAGTTCCCAGCTCTGGCTGTCACATGTTCAGGGCTCAGCCACCTGAGCCTCATGTATTCTCCAGTGTCTGCCGAGCAGGAGGATATTTC--AGGGAATCTTACTGGTATATCACCAGATCTCCCTGGAAGGCATCAGGGACAGTGGTGAGCTTGGCAGTGAGCCTTCTCCACCTCCCTAGTTCAAGCCCTGCCCATGGAGAGGCAGGGGCCATCTTGGTGCTGTTGGGCCATCCTGACCAACATGGCA----GCAGTGGGCTGGGTTTGCCCATGGCAggtttctcagtgggcactgctgatgtgctgggcagggtcattctttgtg---gggggagctgttc--tgtgcactgaaggatgtttagcagcatctctggcctctacccaccagatgccactagtgcctgcccagctgtgacaaccaacaatgtctccagacactttttttttctttttcttcttcttcttctttttt-tttttttgagatggagtctcgcactgtcac i calJac3.chr5 C 0 C 0 e canFam3.chr9 57403468 431 - 61074082 I a score=37895.000000 s hg38.chr17_GL383566v1_alt 29044 16 + 90219 ccgggcagaagtgcag s panTro4.chr17 76223679 16 + 82630442 ccaggcagaagtgcag i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3646233 16 - 94967081 ccaggcaggagtgcag i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74810263 16 + 80904711 ccaggctggagtgcag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74619174 16 + 80997621 ccaggctggagtgcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68626508 16 + 74645514 ccaggctggagtgcag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30680169 16 - 75148670 ccaggctggagtgcag i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126510722 16 + 159171411 ccaggctggagtgcag i calJac3.chr5 C 0 I 296 e canFam3.chr9 57403468 431 - 61074082 I e ponAbe2.chr17 67321158 453 + 73212453 I a score=3298.000000 s hg38.chr17_GL383566v1_alt 29060 6 + 90219 tggta--------------------------------t s panTro4.chr17 76223695 6 + 82630442 tggta--------------------------------c i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3646249 6 - 94967081 tggta--------------------------------c i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74810279 38 + 80904711 tggtacgatctcagctctactgcggagtgcagtggtgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74619190 6 + 80997621 tggta--------------------------------c i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68626524 6 + 74645514 tggtg--------------------------------c i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30680185 6 - 75148670 tggtg--------------------------------c i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126511034 6 + 159171411 tggca--------------------------------c i calJac3.chr5 I 296 C 0 e canFam3.chr9 57403468 431 - 61074082 I e ponAbe2.chr17 67321158 453 + 73212453 I a score=457182.000000 s hg38.chr17_GL383566v1_alt 29066 170 + 90219 gatctcagc-tc-actgcaacctccacctcctgggttgggttcaagcgattctcctgcctcagcctcccgagtagctgtgattacaggcacccaccaccacgcctggctaa--tttttaaatttttagtagagaaagggtttcaccatgttggccaggctggtctcgaactcct s panTro4.chr17 76223701 170 + 82630442 gatctcagc-tc-actgcaacctccgcctcctgggttgggttcaagcgattctcctgcctcaacctcccgagtagctgtgattacaggcacccaccaccacgcctggctaa--tttttaaatttttagtagagaaagggtttcaccatgttggccaggctggtctcgaactcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67321611 171 + 73212453 gatctcagcttc-agtgcaacctccgcctcgtgggttgggttcaagcgattctcctgcctcagcctccctagtagctgtgattacaggcacccgccaccacacctggctaa--tttttaaatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcct i ponAbe2.chr17 I 453 C 0 s nomLeu3.chr14 3646255 171 - 94967081 gatctcagc-tc-actgcaacctctgcctcctgggttgggttcaagcgattctcctgcctcagcctcccgagtagctgtgattacaggcacccgccaccatgcctggctaa-ttttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcgaactcct i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74810317 169 + 80904711 gatctcagc-tctactgcgacctctgcttcctgggttgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccatgacatctggctaa--tttttgtatttttagtagagaca--gttttgccgtgttggctgggctggtcttgaactcct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74619196 169 + 80997621 gatctcagc-tctactgcgacctctgcctcctgggttgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccatgacatctggctaa--tttttgtatttttagtagagaca--gttttgccgtgttggctgggctggtcttgaactcct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68626530 169 + 74645514 gatctcagc-tctacagcaacctctgcctcctgggttgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccatgacatctggctaa--tttttgtatttttagtagagaca--gttttgccgtgttggctgggctggtcttgaactcct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30680191 169 - 75148670 gatctcagc-tctacagcgacctctgcctcatgggttgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccatgacatctggctaa--tttttgtatttttagtagagaca--gttttgccgtgttggttgggctggtcttgaactcct i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126511040 172 + 159171411 catcttggc-ta-actgcagcctctgcctcccaggttgggttcaagcgattctcctgcctcaacctcctgagtagctggaattacaggtgcccaccaccttgcccagctaattttttttaatttttagtagagacagggtttcaccatgttggccaggcgggtctcaaacccgt i calJac3.chr5 C 0 C 0 e canFam3.chr9 57403468 431 - 61074082 I a score=1042321.000000 s hg38.chr17_GL383566v1_alt 29236 325 + 90219 gatctcaagtgatcctcccaactcggcctcccaaagtgctaggattgca---------ggtgtgagcc-accgtgtccagccagacactgtttaatgttccccatgtgggcaaaactgcccctagctgagaatcattgatctaaactagcacttttatg--actgagaggatgaaactgaggcccggaaaggttaagacacttgactgaagtcacacagtgagccc-ctgggatggagctggggctgggcccctagcac-aagctcccagattggggctcCATCT-TCGGAAATGGGGCAGCAGGTGTGGTGTGCGTGATTCTGATGAAAGATGAGACTG s panTro4.chr17 76223871 325 + 82630442 gatctcaagtgatcctcccaactgggcctcccaaagtgctaggattgcc---------gttgtgagcc-accgtgcccagccagacactgtttaatgttccccgtgtgggcaaaactgcccctagctgagaatcattgatctaaactagcacttttatg--actgagaggatgaaactgaagcccggggaggttaagacacttgcctgaagtcacacagtgagccc-ctgggatggagctggggctgggcccctagcac-aagctcccagattggggctccatct-tcagAAATGGGGCAGCAGGTGTGGTGTGCGTGATTCTGATGAAAGATGAGACTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67321782 325 + 73212453 gatctcaagtgatcctcccacctcggcctcccaaagtgctgggattgca---------ggtgtgagcc-accgtgcccagccAGATACTGTTTAATGTTCCCTGTGTGGGCAAAACTGCCCCTAGCTGAGAATCATTGatctaaactagcacttttatg--actgataggatgaaactgaggcccagggaggttaagacacttgcctgaagtcacacagtgagccc-ctgggatggagctggggctgggcccctagcgc-aagctcccagattggggctccatcT-TCGGAAATGGGGCAGCAGGCGTGGTGTGTGTGATTCTGATGAAAGATGAGACTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3646426 325 - 94967081 gatctcaagtgatcctcccacctcggcctcccaaagtgctaggattgca---------gatgtgagcc-accgtgcccagccagagactgtttaatgttctccgtgtgggcaaaagtgcccctagctgagaatcattgatctaaactagcacttttatg--actgagaggatgaaactgaggcccagggaggttaagacacttgcctgaagtcacacagtgagccc-ctgggatggagctggggctgggcccctagcgc-aggctcccagattggggctccatct-tcagAAATGGGGCAGCAGGTGTGGTGTGCGTGATTTTGATGAAAGATGAGACTG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74810486 327 + 80904711 gccctcaagcgatccggctgccttggtctcccaaagtactgggattgct---------ggcgtgagcc-atcgcgcctggccagacactgtttaatgttccctgtgtgagcaaaactgcccctagttaggaatcattgatctaatctagcacttttatagcactgagaggaagaaactgaggcccagggaggttaagacacttgcccgaagtcacacagtgagccc-tagggatggagctggggctggGCCTCTAGAGC-AGGCTCACAGATTGGGGCTCCATCT-CTGGAAATGGGGCAGCAGGTGTGGTGTGCATGATTTTGATGAAATATGAGACTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74619365 327 + 80997621 gacctcaagcgatccggctgccttggtctcccaaagtactgggattgca---------ggcgtgagcc-atcgcgcctggccagacactgtttaatgttccctgtgtgagcaaaactgcccctagttaggaatcattgatctaatctagcacttttatagcactgagaggaagaaactgaggcccagggaggttaagacacttgcccgaagtcacacagtgagccc-tagggatggagctggggctggGCCTCTAGAGC-AGGCTCACAGATTGGGGCTCCATCT-CTGGAAATGGGGCAGCAGGTGTGGTGTGCATGATTTTGATGAAATATGAGACTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68626699 327 + 74645514 gacctcaagcgatccagctgccttggcctcccaaagtactgggattgca---------ggcgtgagcc-accgcgcccggccagacacTGTTTAATGTTCCCTGTGTGAGCAAAACTGCCCCTAGTTAGGAATCATTGATCTAATCTAGCACTTTTATAGCACtgagaggaagaaactgaggcccagggaggttaaGACACTTGCCCGAAGTCACACAGTGAGCCC-TAGGgatggagctggggctgggcctCTAGAGC-AGGCTCACAGATTGGGGCTCCATCT-CTGGAAACGGGGCAGCAGGTGTGGTGTGCATGATTTTGATGAAATATGAGACTG i papAnu2.chr16 C 0 M 408 s chlSab2.chr16 30680360 327 - 75148670 gacctcaagcgatccagctgcctcggcctcccaaagtactgggattgca---------ggtgtgagcc-accacgcctggccagacactgtttaatgttccctgtatgagcaaaactgcccctagttaggaatcattgatctaatctagcacttttatagcactgagaggaagaaactgaggcccagggaggttaagacacttgcccaaagtcacatagtgagccc-tagggatggagctggggctggGCCTCTAGAGC-AGGCTCACAGATTGGGGCTCCATCT-CTGGAAATGGGGGAGCAGGTGTGGTGTGCATGATTTTGATGAAATATGAGACTG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126511212 325 + 159171411 gacctcaagtgatccgcctgtttcggcctcccaaagtgctgggattgca---------ggcgtgagcc-accatgcctggccagacagtgtttcatgttccttgtgtgggtaaaactgcccctagctgagaatcattgatcaactctaacactctgatg--actgagaggaagaaactgaggcccagagaggttaagacacttgcctgaagtcacacaatgagccc-tgggggtggggctggggttgggcatctagcgc-gggctcccagactggggctccctct-TTGCAAATACAGCAGCAGGTGTGGTGTGCGTGATTCTGATGAAAGGTGAGACTG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57403899 332 - 61074082 gatgtccaggggtatccctacctctacc-ctcaagatgccag--tggcatcccctagtggtgacaaccaactgtgtct--ccagacatttctcactatcctctgcgagggtaaaactgtccctgg-tgagaatcactgTtctaatccagctctcttatg--actgggaggaagaaactgaggcccagaggggctaagacgtgtgctcaaagtaacacagcgagtccatagtggtgcagctggggcttggcctcttgcgctgggctcccagatgggtgctcggtccactGCAAACAAAGCAGCAGTTGTGACGAGCCTGGTTTTAACAAAAGGCGTAACTG i canFam3.chr9 I 431 C 0 a score=549317.000000 s hg38.chr17_GL383566v1_alt 29561 253 + 90219 GAATCCACCTAAGGTTGAAATCTCCCACAGACGACCCTGAGATC-ACAATGCTCAGACAGGACAGAC-ATTA-----ATCTCCTTGGTGGTACAAAGAGCCAAG-GTGATTCAATTCCAGGCCCCTGCAGAAGCTTTTTCCAAGGGCTTGGCAGGTG-TAGACACTCTTCCACCAGATCCTGCCCTCGTTAGCATAATCTGAGCAGCTTCTCCTAAGATGGAAGGTCCACGCCCTGATGGGGCAGAGAACACAGGCTTCCAG s panTro4.chr17 76224196 251 + 82630442 GAATCCACCTAAGGTCGAATTCTCCCATAGACGACCCTGAGATC-ACAATGCTCAGAGAGAACAGAC-ATTC-----ATCTCCATGGTGGTACAAAGAGCCAAG-GTGATTCAATTCCAGGCCCCTGCAGAAGCTTTTGCCAAGGGCTTGGCAGGTG-TGGACACTC--CCACCAGATCCTGCCCTCGTTAGCATGATCTGAGCAGCTTCTCCTAAGATGGAAGGTCCACGCCCCGGTGGGGCAGAGAACACAGGCTTCCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322107 253 + 73212453 GAATCCACCTAAGGTCGAATTCTCCCATAGACGACCCTGAGATC-ACAATGCTCAGACAGGACAGAC-ATTA-----ATCTCCTTGGTGGTACAAACAGCCGAG-GTGATTCAACTCCAGGCCCCTGCAGAAGCTTTTTCCAAGGGCTTGGCAGGTG-TAGACACTCTCCCACCAGATCCTGCCCTCGTTAGCATGATCTGAGCAGCTTCTCCTAAGATGGAAGGTCCACGCCCCGATGGGGCAGAGAACATAGGCTTCCAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3646751 253 - 94967081 GAATCCACCTAAGGTCGAATTCTCCCATAGACGACCCTGAGATC-ACAATGCTCAGACGGGACAGAC-ATTA-----ATCTCCTTGGTGGTACAAAGAGCCAAG-GTGATTCGATTCCAGGCCCCTGCAGAAGCTTTTTCCAAGGGCTTGGCAGGTG-TAGACACTCTCCCACCAGATCCTGCCCTTGTTAGCATGATCTGAGCAGCTTCTCCTAAGATGGAAGGTCCACGCCCCAACAGGGCAGAGAACAAAGGCATCCAG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74810813 250 + 80904711 GAATCCACCTAAGGTCGAATTCTCCCCTAGACGA-CCTGAGGTC-ACAATGCTGAGACAG----GAC-ATTC-----ATCTCCTTGGTCATACAAAGAGCCAAGCATGATTCCATTCCAGGCCCCCTCGGAAGCTTTTTCCAAGGGCTCGGCAGATGTTAGACACTCTCCCACCAGATCCTGTCCTTGTTGGCATGATCTGAGCGGCTTCTCCTAAGATGGAAGGCCCACGTCCCGATGGGGCAGCGAACATAGCCTTCCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74619692 250 + 80997621 GAATCCACCTAAGGTCGAATTCTCCCCTAGACGA-CCTGAGGTC-ACAATGCTGAGACAG----GAC-ATTC-----ATCTCCTTGGTCATACAAAGAGCCAAGCATGATTCCATTCCAGGCCCCCTCGGAAGCTTTTTCCAAGGGCTCGGCAGATGTTAGACACTCTCCCACCAGATCCTGTCCTTGTTGGCATGATCTGAGCGGCTTCTCCTAAGATGGAAGGCCCACGTCCCGATGGGGCAGCGAACATAGCCTTCCAG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30680687 254 - 75148670 GAATCCACCTAAGGTCGAATTCTCCCATAGACGA-CCTGAGGTC-ACAATGCTCAGACAGGACAGAC-ATTC-----ATCTCCTTGGTCATACAAAGAGCCAAGCGTGATTCCATTCCAGGCCCCCTCGGAAGCTTTTTCCAAGGGCTCGGCAGATGTTAGACACTCTCCCACCAGATCCTGTCCTTGTTGGCATGATCTGAGCGGCTTCTTCTAAGATGGAAGGCCTACGTCCCGATGGGGCAGCGAACATAGCCTTCCAG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126511537 257 + 159171411 GAATCCACCTAAGATTGAACTCCCCCACAGACATCCCTGAGATC-AGAATGCT--GACAGGACAGAC-ATTAGTGGGATCTCCTTGGTGGCACAAAGAGCCGAGTGCAGTTCAATTCCAGGCCCCTGCAGAAGCTGTTCCCAAGGGTTTGGCAGGTG-TAGACACTACCCCATCAGATCCTGCCCTCGTTGGCATGATCTGAGCGGCTTCTCCTGCAATGGAAGGTCCACACCCTGGCAGGGCAGGGAATGCAGGCTTCTGG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57404231 170 - 61074082 GAATTCATCCAGGGTCCCATTCTCCCCTAGAAATCACTGAGGTCGGGAGCACTCGGGCGGGGCAGAAGGCTG-----ACCTCGTCAGCTGTGCGGAGAGCCAAGAGCGTTTGACTTCCAGGCCCCAACG-----------------------------TGGACCCTCTCCCACCCGACCCTGC----------------------------------------------------------ACAGAGAACACAGCCACCCAG i canFam3.chr9 C 0 C 0 e papAnu2.chr16 68627026 408 + 74645514 M a score=356685.000000 s hg38.chr17_GL383566v1_alt 29814 112 + 90219 ATCAGGAACTGGGACTCTGGGGCCAGATGGCAAAGGGTTCACTTCTGAATAATGCCAGCATCCATCCTA------TTTCTCTCGCTT-AGCTTTATGGTGGTGTCTTCATTGTCAATAT s panTro4.chr17 76224447 112 + 82630442 ATCAGGAACTGGGACGCTGGGGCCAGATGGCAACGGGTTCACTTCTGAATAATGCCAGCATCCATCCTA------TTTCTCTCGCTT-AGCTTTATGGTGGTGTCTTCATTGTCATTAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322360 112 + 73212453 ATCGGGAACTGGGACGCTGGGGCCAGATGGCAAAGGGTTCACTTCTGAATAATGCCAGCGTCCATCCTA------TTTCTCTCGCTT-AGCTTCATGGTGGTGTCTTCATTGTCATTAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647004 112 - 94967081 ATCAGGAACTGGGACGCTGGGGCCAGACGGCAAAGGGTTCACTTCTGAATAATGCCAGAGTCCATCCTA------TTTCTCTTGCTT-AGCTTCATGGTGGTGTCTTCACTGTCATTAT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811063 109 + 80904711 ATCAGGAACTGGGACGCTGGGGACAGATGGCAAAGGGTTCACTTCTGAATAATGCCAGCGTCCATCCTA------TTTCTGTCGCTT-AGCTTCATGGTGGTGTCTTC---GTCATTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74619942 109 + 80997621 ATCAGGAACTGGGACGCTGGGGACAGATGGCAAAGGGTTCACTTCTGAATAATGCCAGCGTCCATCCTA------TTTCTGTCGCTT-AGCTTCATGGTGGTGTCTTC---GTCATTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68627436 109 + 74645514 ATCAGGAACTGGGACGCTGGGGACAGATGGCAAAGGGTTCACTTCTGAATAATGCCAGCGTCCATCCTA------TTTCTCTAGCTT-AGCTTCATGGTGGTGTCTTC---GTCGTTAT i papAnu2.chr16 M 408 C 0 s chlSab2.chr16 30680941 109 - 75148670 ATCAGGAACTGGGATGCTGGGGACAGATGGCAAAGGGTTCACTTCTGAATAATGCCAGCGTCCATCCTA------TTTCTGTCGCTT-AGCTTCATGGTGGTGTCTTC---GTCGTTAT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126511794 112 + 159171411 ATCAGGACCTGGGACGATGGGGACAGACGGCAAAAGGCTTGCCTCCGAATAATGCCAGTGTCCACCCTG------TTTATCTCACTC-AGCTTCATGGTGGTGTCTTCATCGTCGTTAT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57404401 119 - 61074082 TTAGGGAACCTGGACATTTGGACAAAATAATGAAGAGCTCCCCTCCCAGTGGTGCCAGCGTTCGTCCTCAAGGATTTTCTTTTGCTTAAGCTTCACGATGGTGACTtcatcatcatcat i canFam3.chr9 C 0 I 22 a score=136234.000000 s hg38.chr17_GL383566v1_alt 29926 49 + 90219 AAAAAA--CACTTCAggccaggcgcggtggctcacgcctgtaatcccagca s panTro4.chr17 76224559 51 + 82630442 AAAAAAAGCACTTCAggccgggcgcgttggctcacgcctgtaatcccagca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322472 51 + 73212453 AAAAAAAGCACTTCAggccgggcgcggtggctcacacctgtaatcccagca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647116 51 - 94967081 TAAAAAAGCACTTCAggccgggcgcggtggctcacgcctgtaatcccagca i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811172 50 + 80904711 AAAAAA-GCACTTCAggccgggcacgatggctcacgcctgtaatcccagca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620051 50 + 80997621 AAAAAA-GCACTTCAggccgggcacggtggctcacgcctgtaatcccagca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68627545 50 + 74645514 GAAAaa-gcacttcaggctgggcacggtggctcacgcttgtaatcccagca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681050 50 - 75148670 AAAAAA-GCAGTTCAggctgggcacggtgactcacgcctgtaatcccagca i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126511906 48 + 159171411 AAAAA--GCACTTCA-gccaggcgtggcagctcacgcctgtaatcccagca i calJac3.chr5 C 0 C 0 e canFam3.chr9 57404520 22 - 61074082 I a score=38097.000000 s hg38.chr17_GL383566v1_alt 29975 21 + 90219 ctttgggaggttgaggcgggc s panTro4.chr17 76224610 21 + 82630442 ctttgggaggttgaggcaggc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322523 21 + 73212453 ctttgggaggtcaaggcgggt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647167 21 - 94967081 ctttgggaggccgaggcgggt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811222 20 + 80904711 ctttgggaggccaa-gtgggc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620101 20 + 80997621 ctttgggaggccaa-gtgggc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30681100 20 - 75148670 ctttgggaggccaa-gtgggc i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126511954 21 + 159171411 ctttgggaggccaaggtgagc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57404520 22 - 61074082 I e papAnu2.chr16 68627595 0 + 74645514 C a score=31004.000000 s hg38.chr17_GL383566v1_alt 29996 22 + 90219 ggatcatgaggtcaggagatcg s panTro4.chr17 76224631 22 + 82630442 ggatcacgaggtcaggagattg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322544 22 + 73212453 ggatcacgaggtcaggagttca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647188 22 - 94967081 gaatcacgaggtcaggagatcg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811242 22 + 80904711 ggatcacaatgtcaggagggcg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620121 22 + 80997621 ggatcacaatgtcaggaggtcg i macFas5.chr16 C 0 C 0 s calJac3.chr5 126511975 22 + 159171411 ggatcacgtggtcaagacatcg i calJac3.chr5 C 0 C 0 e canFam3.chr9 57404520 22 - 61074082 I e chlSab2.chr16 30681120 0 - 75148670 C e papAnu2.chr16 68627595 0 + 74645514 C a score=134460.000000 s hg38.chr17_GL383566v1_alt 30018 212 + 90219 agaccatcctggctaacccggtgaaaccccgtctctactaaaaatagaaaaaattagccaggcgcagtggtgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatgtcctgaacccgggaggcggag-tttgcagtgagccgagatagcgccactgcactccagcctg------ggcgacagagcgagactccatctcaaaa-----------------aaaaaa s panTro4.chr17 76224653 226 + 82630442 agaccatcctggctaacgtggtgaaa---cgtctctactaaaaatacaaaaaattagccaggcgcagtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatgtcctgaacccaggaggcggag-tttgcagtgagccgagatagcgctactgcactccagcctg------ggtgacagagcgagacgccgtctcaaaacaaacaaacaaacaaacaaacaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322566 212 + 73212453 agaccagcctggccaatatggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcgcagtggtgggtgcctgtagtcccagttacttgggaggctgaggcaggagaatgtcctgaacctggaaggcggag-tttgccatgagccgagatagcgccactgcactccagcctg------ggcgacagagcaagactccatctcaaaa-----------------aaaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647210 212 - 94967081 agaccatcctggctaacatggtgaaaccccgtctctacaaaaaatacaaaaaattagccgagcgtggtggctggttctttt-ttcccagctactttggaggctgaggcaggagaatgtcctgaacccaggaggtggagttttgcagtgagccgagattgcaccactgcactccagcctg------ggcgatagagcaagattccgcctcaaaa-----------------aaaaaa i nomLeu3.chr14 C 0 C 0 s calJac3.chr5 126511997 186 + 159171411 agaccatcctggccaacatggtgaaaccccgtctctactaaaaa-atacaaagttagctgggtgt-------------------------------gggggcagaggcaggagaattgcttgaacctgggaggtggag-gttgcagtgagccaaggtcatgccactgcactccagcctggtgcctggtgacagagtgagactctgtctcaaaa-----------------aataaa i calJac3.chr5 C 0 I 29 e canFam3.chr9 57404520 22 - 61074082 I e rheMac3.chr16 74811264 0 + 80904711 C e chlSab2.chr16 30681120 0 - 75148670 C e papAnu2.chr16 68627595 0 + 74645514 C e macFas5.chr16 74620143 0 + 80997621 C a score=3138.000000 s hg38.chr17_GL383566v1_alt 30230 8 + 90219 aaacaaaa s panTro4.chr17 76224879 8 + 82630442 acaaaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322778 8 + 73212453 aaaaaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647422 8 - 94967081 aaaaaaaa i nomLeu3.chr14 C 0 I 1 e canFam3.chr9 57404520 22 - 61074082 I e rheMac3.chr16 74811264 0 + 80904711 C e calJac3.chr5 126512183 29 + 159171411 I e chlSab2.chr16 30681120 0 - 75148670 C e papAnu2.chr16 68627595 0 + 74645514 C e macFas5.chr16 74620143 0 + 80997621 C a score=10320.000000 s hg38.chr17_GL383566v1_alt 30238 43 + 90219 CACTTCAggccgggcatggtggctcatgcctgtaatcccaaac s panTro4.chr17 76224887 43 + 82630442 caCTTCAggccggacatggtggctcatgcctgtaatcccaaac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322786 43 + 73212453 aaCTTCAggccgggcacggtggctcacacctgtaatcccagcc i ponAbe2.chr17 C 0 C 0 e nomLeu3.chr14 3647430 1 - 94967081 I e canFam3.chr9 57404520 22 - 61074082 I e rheMac3.chr16 74811264 0 + 80904711 C e calJac3.chr5 126512183 29 + 159171411 I e chlSab2.chr16 30681120 0 - 75148670 C e papAnu2.chr16 68627595 0 + 74645514 C e macFas5.chr16 74620143 0 + 80997621 C a score=9615.000000 s hg38.chr17_GL383566v1_alt 30281 21 + 90219 ctttgggaggtcaaggcaggt s panTro4.chr17 76224930 21 + 82630442 ctttgggaggtcaaggcgggt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322829 21 + 73212453 ctttgggaggtcaaggcgggt i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 68627595 21 + 74645514 ctttgtgaggccaaggtggac i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3647430 1 - 94967081 I e canFam3.chr9 57404520 22 - 61074082 I e rheMac3.chr16 74811264 0 + 80904711 C e calJac3.chr5 126512183 29 + 159171411 I e chlSab2.chr16 30681120 0 - 75148670 C e macFas5.chr16 74620143 0 + 80997621 C a score=17566.000000 s hg38.chr17_GL383566v1_alt 30302 22 + 90219 ggatcacgaggtcaggagttca s panTro4.chr17 76224951 22 + 82630442 ggatcacgaggtcaggagttca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67322850 22 + 73212453 ggatcacgaggtcaggagttca i ponAbe2.chr17 C 0 C 0 s papAnu2.chr16 68627616 22 + 74645514 ggatcacaatgtcaggagctcg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681120 22 - 75148670 ggatcacaatgtcaggagctcg i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3647430 1 - 94967081 I e canFam3.chr9 57404520 22 - 61074082 I e rheMac3.chr16 74811264 0 + 80904711 C e calJac3.chr5 126512183 29 + 159171411 I e macFas5.chr16 74620143 0 + 80997621 C a score=94762.000000 s hg38.chr17_GL383566v1_alt 30324 50 + 90219 agaccagcctggccaatatggtgaaaccccgtctctactaaaaatacaaa s panTro4.chr17 76224973 50 + 82630442 agaccagcctggccaatatggtgaaaccccatctctactaaaaatacaaa i panTro4.chr17 C 0 M 2028 s ponAbe2.chr17 67322872 50 + 73212453 agaccagcctggccaatatggtgaaaccccatctctactaaaaatacaaa i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74811264 50 + 80904711 aggccagcctggccaatatggtgaaaccccatctctactaaaaatacaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620143 50 + 80997621 aggccagcctggccaatatggtgaaaccccatctctactaaaaatacaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68627638 50 + 74645514 aggccagcctggccaatatggtgaaatcccgtctctactaaaaatagaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681142 50 - 75148670 aggccagcctggccaatatggtgaaaccccatctctactaaaaatacaaa i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3647430 1 - 94967081 I e canFam3.chr9 57404520 22 - 61074082 I e calJac3.chr5 126512183 29 + 159171411 I a score=192498.000000 s hg38.chr17_GL383566v1_alt 30374 165 + 90219 aattagctggacatggtggcatgcacctgtagtcccagctactcaagaagcggaggcagaagaattgcttgaacctgggaggctgaggctgcagtgagctgaaatagcaccactgcactccagcctgggcgatacagcaagactccatctc-aaaaaaaaaaa-------------aaa s ponAbe2.chr17 67322922 178 + 73212453 aattagctggacatggtggcatgcacctgtagtcccagctactcaagaagctgaggcagaagaattgcttgaacctgggaggctgaggctgcagtgagctgaaatcgcaccactgcactccaggctgggcgataaagcgagactccgtctc-aaaaaaaaaaagaaaacaaaaaacaaa i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74811314 166 + 80904711 aattagccgggcatggtggtgtgcgcctgtagtcccagcttctcgggaggctgaggcagtagaatcagttgaacctgggaggctaaggctgctgtgagctgagattgcgccactgcactccagcctgggtgacagagcgatactccgtctcaaaaaaaaaaaa-------------aaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620193 165 + 80997621 aattagccgggcatggtggtgtgcgcctgtagtcccagctactcgggaggctgaggcagtagaatcagttgaacctgggaggctaaggctgctgtgagctgagattgtgccactgcactccagcctgggtgacagagcgatactccgtctc-aaaaaaaaaaa-------------aaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68627688 165 + 74645514 aattagccagacgtggtggtgtgtgcctgtagtcccagctactcgggaggctgaggcagtagaatcagcgaaacctgggaggctgaggctactgtgagctgagattgcgccactgcactccagcctgggtggcagagtgagactccgtttc-aaaaaaaaaaa-------------aaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681192 165 - 75148670 aattagccggacatggtggtgtgcgcctgtagtcccagctactcgggaggctgaggcagtagaatcagttgaacctgggaggctgaggctgctgtgagctgagattgcgccactgcactccagcctgggtgacagagcgatactccttctc-aaaaaaaaaaa-------------aaa i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3647430 1 - 94967081 I e canFam3.chr9 57404520 22 - 61074082 I e calJac3.chr5 126512183 29 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=-515.000000 s hg38.chr17_GL383566v1_alt 30539 2 + 90219 ga s ponAbe2.chr17 67323100 2 + 73212453 ga i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74811480 2 + 80904711 aa i rheMac3.chr16 C 0 I 9 s macFas5.chr16 74620358 2 + 80997621 aa i macFas5.chr16 C 0 I 9 s papAnu2.chr16 68627853 1 + 74645514 a- i papAnu2.chr16 C 0 I 6 s chlSab2.chr16 30681357 2 - 75148670 aa i chlSab2.chr16 C 0 I 20 s calJac3.chr5 126512212 2 + 159171411 AA i calJac3.chr5 I 29 C 0 e nomLeu3.chr14 3647430 1 - 94967081 I e canFam3.chr9 57404520 22 - 61074082 I e panTro4.chr17 76225023 2028 + 82630442 M a score=18155.000000 s hg38.chr17_GL383566v1_alt 30541 15 + 90219 GCACTTCCACTCCAC s ponAbe2.chr17 67323102 15 + 73212453 GCACTTCCACTCCAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647431 15 - 94967081 GCACTTCCACTCCAC i nomLeu3.chr14 I 1 C 0 s rheMac3.chr16 74811491 15 + 80904711 GCACTTCAACCACAT i rheMac3.chr16 I 9 C 0 s macFas5.chr16 74620369 15 + 80997621 GCACTTCAACCACAT i macFas5.chr16 I 9 C 0 s papAnu2.chr16 68627860 15 + 74645514 gcacttcaaCCCCAT i papAnu2.chr16 I 6 C 0 s calJac3.chr5 126512214 15 + 159171411 GCACTTTGGCCCACC i calJac3.chr5 C 0 C 0 e canFam3.chr9 57404520 22 - 61074082 I e chlSab2.chr16 30681359 20 - 75148670 I e panTro4.chr17 76225023 2028 + 82630442 M a score=-5610.000000 s hg38.chr17_GL383566v1_alt 30556 5 + 90219 --CCCCT s ponAbe2.chr17 67323117 5 + 73212453 --CCCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3647446 5 - 94967081 --CCCCT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811506 3 + 80904711 --GCA-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620384 3 + 80997621 --GCA-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68627875 3 + 74645514 --GCG-- i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126512229 3 + 159171411 --CCC-- i calJac3.chr5 C 0 C 0 s canFam3.chr9 57404542 5 - 61074082 CTCCA-- i canFam3.chr9 I 22 C 0 e chlSab2.chr16 30681359 20 - 75148670 I e panTro4.chr17 76225023 2028 + 82630442 M a score=111877.000000 s hg38.chr17_GL383566v1_alt 30561 42 + 90219 GGTGCATACCA---TGTTGCTCTCATGAGGCAGGCAGACCGCAGT s ponAbe2.chr17 67323122 42 + 73212453 GGTGAATACCA---TGTTGCTCTCGTGAGGCAGGCAGACCGCAGT i ponAbe2.chr17 C 0 I 369 s nomLeu3.chr14 3647451 42 - 94967081 GGTGCATACCA---TGTTGCTCTCATGAGGCAGGCAGACCGCAGT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811509 42 + 80904711 GATGCATACCA---TGTCGCTCTCGTGAGGCAGGCAGACCGCAGT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620387 42 + 80997621 GATGCATACCA---TGTTGCTCTCGTGAGGCAGGCAGACCGCAGT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68627878 42 + 74645514 GGTGCATACCA---TGTTGCTCTcgtgaggcaggcagactgcagT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681379 42 - 75148670 GATGCATACCA---TGTTGCTCTCGTGAGGCAGGCAGACCGCAGT i chlSab2.chr16 I 20 C 0 s calJac3.chr5 126512232 42 + 159171411 GGTGCATACCA---TGCTGCTCTCCTGAGGCAGGCAGATGCAAGT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57404547 45 - 61074082 AGTGCATGACGTGTTGTTGCTCTTGTGAAACAAGTGGCCTGCAGT i canFam3.chr9 C 0 C 0 e panTro4.chr17 76225023 2028 + 82630442 M a score=333226.000000 s hg38.chr17_GL383566v1_alt 30603 151 + 90219 TTGTTCAATAAACACCTTTCCGGTGCGTGAACTCATATTTTAAAATGTGTTCTGGGAAAAGGCTGTTGAAA-GAACCCCCAGTAAGAATTCTTCTCCAATGCCAGATTTCTCTTGTGATCGCTTCCTGATTTTCTGTTTAATACGTGAAATT s nomLeu3.chr14 3647493 148 - 94967081 CTGTTCAATAAACACCTTTCCAGTGCGTAAACTCATATTTTAAAATGTGTTCTGGGAAAAGACTGTTGAAA-GAACCCCCTGTAAGAATCCTG---TAATGCCAGATTTCTCTTGTGATCGCTTCCTGATTTTCTGTTTAATACGTGAAATT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811551 151 + 80904711 CTGTTCAATAAACACCTTTCCAGTGCGTGAACTCATATTTTAAAATGTGTTCTGGGAAAAGGCTGTTGAAA-GAACCCCCAGTAAGAATCCTTCTGTAATGCCAGACTTCTCTTGTGATCGCTTCCTGATTTTCTGTTTAATATGTGAAATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620429 151 + 80997621 CTGTTCAATAAACACCTTTCCAGTGCGTGAACTCATATTTTAAAATGTGTTCTGGGAAAAGGCTGTTGAAA-GAACCCCCAGTAAGAATCCTTCTGTAATGCCAGACTTCTCTTGTGATCGCTTCCTGATTTTCTGTTTAATATGTGAAATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68627920 151 + 74645514 CTGTTCAATAAACACCTTTCCAGTGCGtgaactcatattttaaaatgtgttctggGAAAAGGCTGTTGAAA-GAACCCCCAGTAAGAATCCTTCTGTAATGCCAGACTTCTCTTGTGATCGCTTCCTGATTTTCTGTTTAATATGTGAAATT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681421 151 - 75148670 CTGTTCAATAAACACCTTTCCAGTACGTGAACTCATATTTTAAAATGTGTTCTGGGAAAAGGCTGTTGAAA-GAACCCCCAGTAAGAATCCTTCTGTAATGCCAGACTTCTCTTGTGATCGCTTCCTGATTTTCTGTTTAATACGTGAAATT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126512274 151 + 159171411 CTGTTCAATAAACACCTTTCCAGTGTGTGAACTCCTATTTTAAAATGTGTTCTGGGAAAAGGCTGTTGAAA-GAACCCTCAGTAAGAATCTTTTTGTCATGCCAGATTTCTCTCGTGATCCCTTTCTGATTTTCTGTTTAATACGTGAAATT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57404592 151 - 61074082 CCGCTCAATAAACACCTTCCCGGGATATCAGATCGTGTGTTGAAATGTGTTCTGGG-AAAGGCCGTTGAAAGGAACCCCCAGTAGGAAGGCTTTCATGATGCCAGATTTCCCTTGTGATTACTTCCTGATTTTTGGTTCAATAAATGAAATT i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=9933.000000 s hg38.chr17_GL383566v1_alt 30754 5 + 90219 ACACA s nomLeu3.chr14 3647641 5 - 94967081 ACACA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74811702 5 + 80904711 ACACA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620580 5 + 80997621 ACACA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68628071 5 + 74645514 ACACA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681572 5 - 75148670 ACACA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126512425 5 + 159171411 ACACA i calJac3.chr5 C 0 C 0 e canFam3.chr9 57404743 0 - 61074082 C e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=910.000000 s hg38.chr17_GL383566v1_alt 30759 1 + 90219 T s rheMac3.chr16 74811707 1 + 80904711 T i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620585 1 + 80997621 T i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30681577 1 - 75148670 T i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126512430 1 + 159171411 T i calJac3.chr5 C 0 I 2 e nomLeu3.chr14 3647646 0 - 94967081 C e canFam3.chr9 57404743 0 - 61074082 C e ponAbe2.chr17 67323164 369 + 73212453 I e papAnu2.chr16 68628076 0 + 74645514 C e panTro4.chr17 76225023 2028 + 82630442 M a score=1802.000000 s hg38.chr17_GL383566v1_alt 30760 6 + 90219 GGTGAG s rheMac3.chr16 74811708 6 + 80904711 GGTATG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74620586 6 + 80997621 GGTATG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30681578 6 - 75148670 GGTACA i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3647646 0 - 94967081 C e canFam3.chr9 57404743 0 - 61074082 C e ponAbe2.chr17 67323164 369 + 73212453 I e calJac3.chr5 126512431 2 + 159171411 I e papAnu2.chr16 68628076 0 + 74645514 C e panTro4.chr17 76225023 2028 + 82630442 M a score=2511.000000 s hg38.chr17_GL383566v1_alt 30766 9 + 90219 GAAttttct s rheMac3.chr16 74811714 9 + 80904711 GAATTTTCT i rheMac3.chr16 C 0 I 343 s macFas5.chr16 74620592 9 + 80997621 GAATTTTCT i macFas5.chr16 C 0 I 322 e nomLeu3.chr14 3647646 0 - 94967081 C e canFam3.chr9 57404743 0 - 61074082 C e ponAbe2.chr17 67323164 369 + 73212453 I e calJac3.chr5 126512431 2 + 159171411 I e chlSab2.chr16 30681584 0 - 75148670 C e papAnu2.chr16 68628076 0 + 74645514 C e panTro4.chr17 76225023 2028 + 82630442 M a score=0.000000 s hg38.chr17_GL383566v1_alt 30775 319 + 90219 ttttttttttttttttttttttttttttttttttttgagacggagtctcgctctgttgcccaggccggactgcggactgcaatggcgcaatctcggctcactgcaagctccgcttcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccttgttagccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcc e nomLeu3.chr14 3647646 0 - 94967081 C e canFam3.chr9 57404743 0 - 61074082 C e rheMac3.chr16 74811723 343 + 80904711 I e ponAbe2.chr17 67323164 369 + 73212453 I e calJac3.chr5 126512431 2 + 159171411 I e chlSab2.chr16 30681584 0 - 75148670 C e papAnu2.chr16 68628076 0 + 74645514 C e macFas5.chr16 74620601 322 + 80997621 I e panTro4.chr17 76225023 2028 + 82630442 M a score=155.000000 s hg38.chr17_GL383566v1_alt 31094 5 + 90219 cggcc s canFam3.chr9 57404743 5 - 61074082 CAGCA i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3647646 0 - 94967081 C e rheMac3.chr16 74811723 343 + 80904711 I e ponAbe2.chr17 67323164 369 + 73212453 I e calJac3.chr5 126512431 2 + 159171411 I e chlSab2.chr16 30681584 0 - 75148670 C e papAnu2.chr16 68628076 0 + 74645514 C e macFas5.chr16 74620601 322 + 80997621 I e panTro4.chr17 76225023 2028 + 82630442 M a score=1560.000000 s hg38.chr17_GL383566v1_alt 31099 7 + 90219 TGGTGAG s nomLeu3.chr14 3647646 7 - 94967081 TGGTGCA i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68628076 7 + 74645514 TGGTATG i papAnu2.chr16 C 0 C 0 s canFam3.chr9 57404748 7 - 61074082 TCGTATG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74811723 343 + 80904711 I e ponAbe2.chr17 67323164 369 + 73212453 I e calJac3.chr5 126512431 2 + 159171411 I e chlSab2.chr16 30681584 0 - 75148670 C e macFas5.chr16 74620601 322 + 80997621 I e panTro4.chr17 76225023 2028 + 82630442 M a score=1000.000000 s hg38.chr17_GL383566v1_alt 31106 1 + 90219 G s nomLeu3.chr14 3647653 1 - 94967081 G i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68628083 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681584 1 - 75148670 G i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57404755 1 - 61074082 G i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74811723 343 + 80904711 I e ponAbe2.chr17 67323164 369 + 73212453 I e calJac3.chr5 126512431 2 + 159171411 I e macFas5.chr16 74620601 322 + 80997621 I e panTro4.chr17 76225023 2028 + 82630442 M a score=24788.000000 s hg38.chr17_GL383566v1_alt 31107 26 + 90219 AATTTTCTGAAAGCACACACGTATTT s nomLeu3.chr14 3647654 26 - 94967081 AATTTTCTGAAAGCACACACTTATTT i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68628084 26 + 74645514 AATTTTCTAAACGCACACATTTATtt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681585 26 - 75148670 AATTTTCTAAACGCACACATTTATTT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126512433 26 + 159171411 AATTTTCTGAGAGCACAAACACATTT i calJac3.chr5 I 2 I 4 s canFam3.chr9 57404756 26 - 61074082 AGTTTTCTTAAAGCACCAACACATTT i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74811723 343 + 80904711 I e ponAbe2.chr17 67323164 369 + 73212453 I e macFas5.chr16 74620601 322 + 80997621 I e panTro4.chr17 76225023 2028 + 82630442 M a score=10273.000000 s hg38.chr17_GL383566v1_alt 31133 22 + 90219 ---AAGAGTTCTGGAGAGAAGCA-GT--------- s nomLeu3.chr14 3647680 22 - 94967081 ---AAGAGTTCTGGAGAGAGGGG-GT--------- i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74620923 20 + 80997621 ---aagaGTTCTGGAGACGGGGG------------ i macFas5.chr16 I 322 I 1 s papAnu2.chr16 68628110 20 + 74645514 ---aagagttctggagatggggt------------ i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681611 21 - 75148670 ---AAGAGTTCTGGAGACGGGGGT----------- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126512463 22 + 159171411 ---GAGAGTTCTGGAGGGAGGGT-GT--------- i calJac3.chr5 I 4 C 0 s canFam3.chr9 57404782 34 - 61074082 ATGTGGAGGTGGGGCTAGAAGGT-GTGTGTGGGGT i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74811723 343 + 80904711 I e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=405749.000000 s hg38.chr17_GL383566v1_alt 31155 223 + 90219 GTGTGTGCAC--------------TGGGGGATCCGACATACCCTAAGGATTGAGTTTGTCTGTACTAGGACAGGATCCATGAATTCATGCATGCATTCAATTTTAGAATCCTAGAGTTAGTGGCTCTGGCACAAAACAAGGAGATTGGAGAG-----------CACTGGGC-AGCAGAGGCTCTACTCCCAGGCCGGGCTCACCAGCCTCCCCGGGG--GGCAGGCATGCAACAGAGCC-CATGGGAGTTTC s nomLeu3.chr14 3647702 218 - 94967081 GTGTATGCAC--------------TGGGGGATCCGACATACCCTAAGAACTGAGTTTGTCTATACTAGGACAGGATCCATGAATTCATGCATGCATTTGATTTTAGAATCCTAGAGTTAGTGGCTCTGGCACAAAACAAGGAGATTGGAGAG-----------CAC-GAGC-AGCAGAGGCTCTACTCCCAGGCCAGGCTCGCCAGCCTCCCTGGGG--GGCA----TGCAACAGAGCC-CATGGGAGtttc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74812066 215 + 80904711 GTGTGTGCAC--------------TGGGGGATCAGAGATACCCTAAGAATTGA----GTCTGTACTAGGACAGGATCCATGAATTCATGCAAGCATTTGATTTTAGAATCCTATAGTTAGTGACTCTGGCACAAAACATGGAGATGGGAGAG-----------CACTGAGC-AGCGGAGGTTCTACTCCCAGGCTGGGCTCACCAGCCTCCCCGGCA--GGCA----TGCAACAGAGCC-CATGGGAGtttc i rheMac3.chr16 I 343 C 0 s macFas5.chr16 74620944 214 + 80997621 GTGTGTGCAC--------------TGGGGGATCAGAGATACCCTAAGAATTGA----GTCTGTACTAGGACAGGATCCATGAATTCATGCAAGCATTCGATTTTAGAATCCTATAGTTAGTGACTCTGGCACAAAACATGGAGAGTGGAGAG-----------CACTGAGC-AGCGGAGGTTCTACTCCCAGGCTGGGCTCACCAGCCTCCCCGGCA--GGCA----TGCAACAGAGCC-CATGGGAGttt- i macFas5.chr16 I 1 C 0 s papAnu2.chr16 68628130 215 + 74645514 GTGTGTGCAC--------------TGGGGGATCAGACATACCCTAAGAATTGA----GTCTGTACTAGGACAGGATCCATGAATTCATGCATGCATTCGATTTTAGAATCCTATAGTTAGTGACTCTGGCACAAAACATGGAGAGTGGAGAG-----------CACTGAGC-AGCGGAGGTTCTACTTCCAGGCTGGGCTCACCAGCCTCCCTGGCG--GGCA----TGCAACAGAGCC-Catgggagtttc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681632 214 - 75148670 GTGTGTGCAC--------------TGGGGGGTCAGACATACCCTAAGAATTGA----GTCTGTACTAGGACAGGATCCATGAATTCATGCATGCATTCGATTTTAGAATCCTATAGTTAGTGACTCTGGCACAAAACATGGAGAGTGGAGAG-----------CACTGAGC-AGCGGAGGTTCTACTCCCAGGCTGGACTCACCAGCCTCCCCGGCG--GGCA----TGCAACAGAGCC-CATGGGAGttt- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126512485 218 + 159171411 GTGTGTGTAC--------------CAGGGGGTCAGACATACCCTAAGGATTGAGTTTGCCTGTACTAGGACAGGATGTGTGAATTCATGCATGCATTTGATTTTAGAATCCTTGAGTTAGTGGCTCTGGCACAAAACAAGGCAATTGGAGAA-----------CACTGAGC-AGCAGAGGTTCTACG-CCAGGCCCGGCTCTCCAGCCTCCCCAGGG--GGCA----TGCCACAGAGCC-CATGAAAGtttc i calJac3.chr5 C 0 C 0 s canFam3.chr9 57404816 246 - 61074082 GTGTGTGTGCGTGGTGCGGGGAGTTGGGGGGTCAGACGTACCCTAAGGGCTGAGTTTGTCTATACTGGAACAGGATACATAGATTCAGTCACGTGGTTGATTTTGCAATCCCAGAGTTAGCGGCTCTGGCACCCGATATGCGAGTCAGAGGGATATTACAATCAAATGAGCAAACATCGGTTCTATTTTCAGCCCGG--TTTCCTGCCTCCCTGGGGATGCCA----TCTGACAGCGCCATGTGGGGGCTTC i canFam3.chr9 C 0 I 747 e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=293042.000000 s hg38.chr17_GL383566v1_alt 31378 191 + 90219 GGttttttttttttttt---gagctgga-------------gtctagctctgtcgcccaggctggagtgcagcggcatgatctcagctcactgcaacctccgcctcctgaattcaagtggttctcctgcctcagcctcccaattccagcctccctcagctggaattacaggtgtgcaccaccatgcctggctaa--tttttgtattttt s nomLeu3.chr14 3647920 194 - 94967081 ttttttttttttttttttttgagctgga-------------gtctagctctgtcacccaggctggagtgcagtggcatgatgtcagctcactgcaacctccgcctcctgaattcaagtggttctcctgcctcagcctcccaattccagccttcctcagctggaattacaggtatgcaccaccatgcccggctaa--tttttgtattttt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74812281 207 + 80904711 ttttctttttttttttttttgagctggagcctagctctgtcgtccagctctgtcgtccagcctggagtgcagtggcgcgatctcagctcactgcaacctctgcctcctgagttaaagcggttctcctgcctcagcctcccgattccagcctccctcagctggaattacaggaatgtggcaccacgcctggctaa--tttttgtattttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74621158 207 + 80997621 ttttttttttttttttttttgagctggagcctagctctgtcgtccagctctgtcgtccagcctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcctgagttaaagcggttctcctgcctcagcctcccgattccagcctccctcagctggaattacaggaatgtggcaccacgcctggctaa--tttttgtattttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68628345 194 + 74645514 ttttttttttttttttttttgagctgga-------------gtctagctctgtcatccagcctggagtgcagtggtgcgatctcagctcactgcaacctccgcctcctgagttaaagcggttctcctgcctcagcctcccaattccAGCCTCCctcagctggaattacaggaatgtgacaccacgcctggctaa--tttttgtattttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30681846 190 - 75148670 ----tttgttttttttttttgagttgga-------------gtctagctctgtcgtccagcctggagtgcagtggcgccatctcagctcactgcaacctccgcctcccgagttaaagcggttctcctgcctcagcctcccgattccagcctccctcagctggaattataggcatgtgacaccacgcctggctaa--tttttgtattttt i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126512703 168 + 159171411 ttttttta----------------cgga-------------gtctcactctgttgcccagactggagtgcagtggcgcgttctcggctcactgcaacctctgcctcctgagttcaagcgattctcctgcctcagcctcccaagt------------agctgggattacaggtgtgtgccaccacacccatctaatgtttttgtactttt i calJac3.chr5 C 0 I 3326 e canFam3.chr9 57405062 747 - 61074082 I e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=18968.000000 s hg38.chr17_GL383566v1_alt 31569 12 + 90219 gtagagatgggg s nomLeu3.chr14 3648114 12 - 94967081 gtagagatgggg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74812488 12 + 80904711 gtagagactgag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74621365 12 + 80997621 gtagagacgggg i macFas5.chr16 C 0 I 3436 s papAnu2.chr16 68628539 12 + 74645514 gtagagacaggg i papAnu2.chr16 C 0 I 3630 s chlSab2.chr16 30682036 12 - 75148670 gtagagacgggg i chlSab2.chr16 C 0 I 3816 s calJac3.chr5 126516197 12 + 159171411 gtggagataggg i calJac3.chr5 I 3326 C 0 e canFam3.chr9 57405062 747 - 61074082 I e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=81803.000000 s hg38.chr17_GL383566v1_alt 31581 50 + 90219 tttcaccgtgttgcccaggctggtcttgaactcctgggctcaagcaaccc s nomLeu3.chr14 3648126 50 - 94967081 tttcaccatgttgcccaggctggtcttgaactcctgggctcaagcaaacc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74812500 50 + 80904711 tttcaccatgttggccaggctggtcttgacctcctgacctcaactgatcc i rheMac3.chr16 C 0 I 3402 s macFas5.chr16 74624813 50 + 80997621 tttcaccatgttgcccaggctggtcttgaactcctgggatcaagcaacct i macFas5.chr16 I 3436 C 0 s papAnu2.chr16 68632181 50 + 74645514 tttcaccatgttgcccaggctggtcttgaactcctgggatcaagcaacct i papAnu2.chr16 I 3630 C 0 s chlSab2.chr16 30685864 50 - 75148670 tttcaccatgttgcccaggctggtcttgaactcctgggatcaagcaacct i chlSab2.chr16 I 3816 C 0 s calJac3.chr5 126516209 50 + 159171411 tttcgccacattgcccaggctggttttgaactcctaggcccaagcaacct i calJac3.chr5 C 0 C 0 e canFam3.chr9 57405062 747 - 61074082 I e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=219048.000000 s hg38.chr17_GL383566v1_alt 31631 127 + 90219 tcctgccttggcctcccaaagtgctgggattaccagtgtgaacctctgcaccACGCCTGCATACTGTCATTTTAAAAGTCAGATCATCTCTTCCATGAGGAAGGGAGTAGAAC-ATGGAGCCTCAACT s nomLeu3.chr14 3648176 127 - 94967081 ccctgccttggcctcccaaagtgctgggattaccagtgtgaaccactgcaccATGCCTGCATACTGTCATTTTAACAGTCAGATCATCTCTTCCACGAGGAAGGGAGTAGAAC-GTGGAGCCTCAACC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74815952 127 + 80904711 tcctgccttggcctcccaaagtgctgggattaccagtgtgacccactgcaccGTGCCTGCATACTGTCATTTTAAAAGTCAGATCATCTCTTCCATGAGGAAGGGAGTAGAAC-ATGGAGCCTCAACC i rheMac3.chr16 I 3402 C 0 s macFas5.chr16 74624863 127 + 80997621 tcctgccttggcctcccaaagtgctgggattaccagtgtgacccactgcaccGTGCCTGCATACTGTCATTTTAAAAGTCAGATCATCTCTTCCATGAGGAAGGGAGTAGAAC-ATGGAGCCTCAACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68632231 127 + 74645514 tcctgccttggcctcccaaagtgctgggattaccagtgtgagccactgcaccgtgCCTGCATACTGTCATTTTAAAAGTCAGATCATCTCTTCCATGAGGAAGGGAGTAGAAC-ATGGAGCCTCGACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30685914 127 - 75148670 tcctgccttggcctcccaaagtgctgggattaccagtgtgaaccactgcaccGTGCCTGCATACTGTCACTTTAAAAGTCAGATCATCTCTTCCATGAGGAAGGGAGTAGAAC-ATGGAGCCTCAACC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126516259 123 + 159171411 tcctgccttggcctcccaaagggctgggtttacctgcctgagc-----caccacgcccgCATAGTATCATTTTGAAAGTGAAATCATCTCTTCCATGAGGAAGGGAGGTGAACTGTGGAGCCTCAACC i calJac3.chr5 C 0 C 0 e canFam3.chr9 57405062 747 - 61074082 I e ponAbe2.chr17 67323164 369 + 73212453 I e panTro4.chr17 76225023 2028 + 82630442 M a score=1149724.000000 s hg38.chr17_GL383566v1_alt 31758 598 + 90219 GTGCGCATGATAAGAAT-CCGTGCTT--CCCCCTGGGGAAATATCAGGCC--TTATGGGCTTA-AGTGCTCAA-GCAAGAGGGACTTCAGCTTAGACGAAAGCATGAGCCTCAGTTTTGCATTTTCCTAAGGA-GCGTCATCTGCGCCTCTAGGAGTTTTT-ACTATCTGAGCCTCC-GGGTTCTTCTCCAGCCGCTGCTGA-GGGCATGAAGCCATCTGGGGGTGGGGGGCGCAGGTGTGGAAGGAAGAAGCATA---TCCAGTCCCTTGGACGTGGCAGACTCCCAGTGTGTGTGGCGGCGCCCGCAGGAGGCAGTCCCTCTCAGCCGCATCCGCCTTGAGGTTGTTCTCAGTTCTGATGTGGCCCCAAAGAGAACCAGTTCCATTATGGATTAGTAAGAATTTATTTTGAACATGTTGTGGGAAGATGGTGACTGCAGGGGGTGCGGCGGGGGGAGGGAGCCCATTAGAGG-CACCAGGTTCCCCTCCAGCGAGCCCCCCTGGACGTTGCTTCTCCCTGACCCAGCACCTTGGTAGACCCCCTTTGTTGGCCTGTCCACCCTGCTCAGCAAA------------------------------------------CCCAAACCCGAGGGTCAGCCGAGCAGTACCCCCACCCC s ponAbe2.chr17 67323533 532 + 73212453 GTGTGCATGATAAGAATTCCGTGCTTTCCCCCCGGGGGAAATATCCAGCCCTTTATGGGGTTACAGTGCTCAAAGCAAGAGGGACTTCAGCTCGGACAAAAGCATGAGCCTCAGTTTTGCATTTTCCTAAGGATGGGTCATCTGCGCCTCTAGGAG--TTT-ACTATCTGAGCCTTCAGGGTTTTTCTCCAGCTGCTGCTGA-GGGCGTGAAGCCATCTGGGGGT--------------------------------------------------------------------------GGCGCCTGCAGGGGGCAGTCCCTCTCAGCAGCATCTGCCTTGAGGTTGTTCTCAGTTCTGATGTGGCCCCAAAGAAAACCAGTTCCATTATGGACTAGTAAGAATTTATTTTGAACACGTTGTGGGAAGATGGTGGCTGCAGGGG-TGCAGTGGAGGGAGGGAGCCCATTAGAGGACACCAGGTTTCCCTCCAGCGAGCCCCC--GGACGTTGCTTTTCCCTGACCCAGTATCTTGATAGACCCCCTTTGTTGGCCTGTCCACCCTGCTCAGCAAA------------------------------------------CCCAAACCCGGAGGTCAGCCGAGCAGTGCCCCCACCCT i ponAbe2.chr17 I 369 C 0 s nomLeu3.chr14 3648303 563 - 94967081 GTGCGCATGGTAAGAAT-CCGTGCTT--CCCCCTGGGGAAATATCAGCCC--TTATGGGCTTA-AGTGCTCAA-GCAAGAGGGACTTCAGCTTGGATGAAAGCAT----------------------TAAGGA-GCGTCATCTGCGCCTCTAGGAGTTTTT-ACTATCTGAGCCTCC-GGGTTCTTCTCCAGCCGCTGCTGA-GGGCGTGAAGCCATCTGGGGGTGGGGGGCGCAGGTGTGGGAGGAAGAAGCATA---TCCAGTCCCTTGGACGTGGCAGACTCCCAGTGTGTGTGGTGGCGCCCGTGGGGGGCAGTCCCTCTCAGCAGCATCTGCCTTGAGGTTGTCCTCAGTTCTGATGTGGCCCCAAAGAGAACCAGTTCCATTATGGATTAGTAAGAATTTATTTTGAACGTGTTCTGGGAAGATGGTGGCTGCAGGGAGTGCGGCAGGGGGAGGGAGCCCATTAGAGG-CACCAGGTTCCCCTCC-------------AGACGTTGCTTCTCCTTGACCCAGCACCTTGATAGACCCCCTTTGTTGGCCTGTCCACCCTGCTCAGCAAA------------------------------------------CCCAAACCTGAGGGTCAGCCAAGCAGTGCCCCCACCCC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74816079 593 + 80904711 GTGTGCATGGTAAGAAT-CCGTGTTT--CCCCCTGGGGAAATA---GCCC--CTATGGGCTTA-GGTGCTCAA-GCAAGAGGGACTTCAGCCTGGATGAAAGCATGAGCCTCATTTTTGCATTTTCCTAAGGA-GCGTCATCTGTGCCTCTAGGAG--TTT-ACTATCTGAGCCTCC-AGGTTGTTCTCCAGCTGCTGCTGA-GGGTGTGAAGCCATCTGGGGGTGGGGGGCGCAGGTGTGGGAGGAAGAAGTATA---TCCAGTCCCTTGGACGTGGCAGGCTCCCAGTGTGCATGGTGGCGCCCGCAGCGGGCAGTCCCTCTCAGCGGCATCTGCCTTGAGGTTGTTCTCAGTTCTGATGTGGCCCCAAAGAGAACCAGTTCCATTATGGATTAGTGAGAATTTATTTTGAACACACTGTGGGAAGATGGTGGCGGCAGCAGGTGCGGGGCGGTG-GGGAGCCCATTAGAGGACACCAGGTTTCTCTCCAGTGAGCCCCCTTGGACGCTGCTTCTCCCCAACCCAGCACCTCGATAGACCTCCTTTGTGGGCCTGTCCACCCTGCTCAGCAAA------------------------------------------CCCAAACCCGGGGTTCAGCCGAGCAGTGCCCCCACTCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74624990 593 + 80997621 GTGTGCATGGTAAGAAT-CCGTGTTT--CCCCCTGGGGAAATA---GCCC--CTATGGGCTTA-GGTGCTCAA-GCAAGAGGGACTTCAGCCTGGATGAAAGCATGAGCCTCATTTTTGCATTTTCCTAAGGA-GCGTCATCTGCGCCTCTAGGAG--TTT-ACTATCTGAGCCTCC-AGGTTGTTCTCCAGCTGCTGCTGA-GGGTGTGAAGCCATCTGGGGGTGGGGGGCGCAGGTGTGGGAGGAAGAAGTATA---TCCAGTCCCTTGGACGTGGCAGGCTCCCAGTGTGCATGGTGGCGCCCGCAGCGGGCAGTCCCTCTCAGCGGCATCTGCCTTGAGGTTGTTCTCAGTTCTGATGTGACCCCAAAGAGAACCAGTTCCATTATGGATTAGTGAGAATTTATTTTGAACACACTGTGGGAAGATGGTGGCGGCAGCGGGTGCGGGGTGGTG-GGGAGCCCATTAGAGGACACCAGGTTTCTCTCCAGTGAGCCCCCTTGGACGCTGCTTCTCCCCAACCCAGCACCTCGATAGACCTCCTTTGTGGGCCTGTCCACCCTGCTCAGCAAA------------------------------------------CCCAAACCCGGGGTTCAGCCGAGCAGTGCCCCCACTCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68632358 594 + 74645514 GTGTGCATGGTAAGAAT-CCATGTTT--CCCCCTGGGGAAATA---GCCC--CTATGGGCCTA-GCTGCTCAA-GCAAGAGGGACTTCAGCCTGGACGAAAGCATGAGcctcatttttgcattttcctaagGA-GCGTCATCTGCGCCTCTAGGAG--TTTAACTATCTGAGCCTCC-GGGTTGTTCTCCAGCTGCTGCTGA-GGGCATGAAGCCATCTGGGGGT-GGGGGCGCAGGTGTGGGAGGAAGAAGTATA---TCCAGTCCCTTGGACGTGGCAGGCTCCCACTGTGCATGGTGGCGCCCGCATGGGGCAGTCCCTCTCAGCGGCATCTGCCTTGAGGTTGTTCTTAGTTCTGATGTGGCCCCAAAGAGAACCAGTTCCATTATGGATTAGTGAGAATTTATTTTGAACACACTGTGGGAAGATGGTGGCTGCAGCGGGTGCGGGGCGGGGAGGGAGCCCATTAGAGGACACCAGGTTTCTCTCCAGTGAGCCCCCTTGGACGTTGCTTCTCCCCAGACCAGCACCTCGATAGACCCCCTTTGTGGGCCTGTCCACCCTGCTCAGCAAA------------------------------------------CCCAAACCCGGGGGTCAGCCGAGCAGTGCCCCCACTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30686041 589 - 75148670 GAGTGCATGATAAGAAT-CCGTGTTT--CCCCCTGGGGAAATA---GCCC--CTATGGGCTTA-GGTGCTCAA-GCAAGAGGGACTTTAGCCTGGACGAAAGCATGAGCCTCATTTTTACATTTTCCTAAGGA-GCGTCATCTGCGCCTCT---AG--TTT-ACCATCTGAGCCTCT-GGGTTGTTCTCCAGTCACTGCTGA-GGGCGTGAAGCCATCTTGGGGT-GGGGGCGCAGGTGTGGGAGGAAGAAGTATA---TCCAGTCCTTTGGACGTGGCAGGCTCCCACTGTGCATGGTGGCGCCCGCAGTGGGCAGTCCCTTTCAGCGGCATCCGCCTTGAGGTTGTTCTCAGTTCTGATGTGGCCCGAAAGAGAACCAGTTCCATTATGGATTAGTGAGAATTTATTTTGAACACACTGTGGGAAGATGGTGGCGGCAGCGGGTGCGGGGCGGTG-GGGAGCCCATTAGAGGACACCAGGTTTCTCTCGAGTGAGCCCCCTTGGACGTTGCTTCTCCCCAACCCAGCACCTTGATAGACCCCCTTTGTGGGCCTGTCCACCCTGCTCAGCAAA------------------------------------------CCCAAACCCGGGGGTCAGCCGAACAGTGTCCCCACTCT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126516382 617 + 159171411 GTGTGCATGATACGAAT-CCTTGCTT--CCTTCTGGGGAAGTATCAGCCC--CTACGGGCTTA-GGCGCTCAA-GTAAGAGGGATGTCAACTTGGATGAAAGCATGAGCCTCATGTTTGCATTTTCCCAAGGA-GTGCCATCTGCATTTGTAGGAG--TTT-A----CTGAGCCTA--GAGTCCTTCTCCAGACGCTGCTGAGGGGAATGAAGTCATCTGGGGGT-GGGGGCACAGGTGTGGG-GGGAGAAGCACATCCTCCAGTCCCTTGGGCGTGGCAGGCTCCCTGTGTTTATGGTGGTGCCCACAG-GGGCAGCCCCTCTCACCAGCATCCACCTTGAGGTTG---TCAGCTCTGATGTGACCCC-AAGAGATCCAGTTCCATCATGGATTAGTGAGAA-TTATTTTGAACACGTTGTGGGAAGATGGTGGCTGCAGGGG----GAAGTGGGG---------GTGAGAGGACACCAGGTTTCCCTCCAGGGAGCCCCACTGGACGTCGCTTCTCTGCAACCCAGCCTCTGGACAGACCCCCTTTGTTAGCATGCCCACCCTGCTCAGCAAACCCAAGTAAGGGTCAGCAGAGCAGCACCCCCACCCCAGTGTCCCCAAACCCGGAGGTCGGCCGAGCAGTGCCCCCACCCC i calJac3.chr5 C 0 I 133 e canFam3.chr9 57405062 747 - 61074082 I e panTro4.chr17 76225023 2028 + 82630442 M a score=382596.000000 s hg38.chr17_GL383566v1_alt 32356 171 + 90219 GGCGTTCCCAAGCGGGCCCGGCGTG-GGGTGACTCAGCTTGTTCCACTCCATCTGTTAGAAAAGGCACAGGACTGTCCAAGGCTGAAGCGGGGTGGGATTTTAGGGGCCCCTCCATGCAAACAAACATAAA-TCAACTTCCGTCCTGCCAAAAGCTCTGCTGATAATTGAGAG s ponAbe2.chr17 67324065 171 + 73212453 GGCGTTCCCAAGCGGGCCCGGCGTG-GGGTGACTCAGCTTGTTCCACTCCATCTGTTAGAAAAGGCACTGGACCGTCCAGGGCTGAAGCGGGGTGGGATTTTAGGGGCCCCTCCATGCAAACAAACGTAAA-TCAACTTCCATCCTGCCAAAAGCTCTGCTGATAATTGAGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3648866 171 - 94967081 GGCGTTCCCAAGCGGGCCCGGCGTG-GGGTGACTCAGCTTGTTCCACTCCATCTGTTAGAAAAGGCACTGGACCATCCAGGGCTGAAGCAGGGTGGGATTTTAGGGGTCCCTCCATGCAAACAAACATAAA-TCAACTTCCTTCCTACCAGAAGCTCTGCTGATAATTGAGAG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74816672 171 + 80904711 GGCGTTCCCAAGCGGGCCTGGCGTG-GGGTGACTCAGCTTGTTCCACTCCATCTCTTAGAAAAGGCACTGGACCGTCCAGGGCTGAAGCGGGGTGGGATTTTAGGGGTCCCTCCCTGCAAACAAACATAAA-TCAACTTCTATCCTGCCATAAGTTCTGCTGATAATTGAGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74625583 171 + 80997621 GGCGTTCCCAAGCGGGCCCGGCGTG-GGGTGACTCAGCTTGTTCCACTCCGTCTCTTAGAAAAGGCACTGGACCGTCCAGGGCTGAAGCGGGGTGGGATTTTAGGGGTCCCTCCCTGCAAACAAACATAAA-TCAACTTCTATCCTGCCATAAGTTCTGCTGATAATTGAGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68632952 171 + 74645514 GGTGTTCCCAAGCGGGCCAGGCGTG-GGGTGACTCAGCTTGTTCCACTCCGTCTGTTAGAAAGGGCACTGGACCGTCCAGGGCTGAAGCGGGGTGGGATTTTAGGGGTCCCTCCCTGCAAACAAACATAAA-TCAACTTCTATCCTGCCATAAGTTCTGCTGATAATTGAGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30686630 172 - 75148670 GGTGTTCCCAAGCGGGCCCGGTGTG-GGGTGACTCAGCTTGTTCCATTCCGTCTGTTAGAAAAGGCACTGGACCGTCCAGGGCTGAAACGGGGTGGGATTTTAGGGGTCCCTCCCTGCAAACAAACATAAATTCAACTTCTATCCTGCCATAAGTTCTGGTGATAATTGAGAG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126517132 147 + 159171411 GGCATTCCCAAGCAGGCCCGGTGTGAGGGTGACTCAGCTTGTTCCACTCCCTCTGTTACAAAAGGCACTGGACCATCCAGGGTTGAAGCTGGGTGGGATTTTAGGG--------------------------GTAACTTCCATCCTGCCAGAAGCTCTGCTGATATTTGAGAG i calJac3.chr5 I 133 C 0 e canFam3.chr9 57405062 747 - 61074082 I e panTro4.chr17 76225023 2028 + 82630442 M a score=565594.000000 s hg38.chr17_GL383566v1_alt 32527 270 + 90219 GCAAGCTAATGAACACA---GCAGTT---TAAAA--TT---CACTCTCCAATATCTATTGCAGAATTGCATTGGATAGTTAAAAATCAAA-GAGTCTAGCCCCCTAGACCCGGCCTGCTTCCTGGGGAGGCTGCCCCCGA-GTTAGGATTTCACATGACACCTCCAGCACTTCTAAAGGGCCAACCCCAGAATCGCTCACTCCCCAGCACGTCTGGGCTGTGCGCGGCA-CCCCA-GGTAAATGCAGCGGCCTC---TGCATT-AGCCCGCGCTGCTTAGAGACGCTGC s ponAbe2.chr17 67324236 273 + 73212453 GCAAGCTAATGAACACA---GCAGTTCTCTAAAA--TT---CACTCTCCAATATCTATTGCAGAATTGCATTGGATCGTTAAAAATCAAA-GCGTCTAGCCCCCTAGACCAGGCCTGCTTCCTGGGGACACTGCCCCCGA-GTTAGGATTTCACATGACACCTCCGGCACTTCCAAAGGGCCAACCCCAGAATCACTCACTCCCCAGCACGTCTGGGCTGTGAGTGTCA-CCCCA-GGTAAACACAACAGCCTC---CGCACT-AGCCCGCGCTGCTAAGAGACGGTGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3649037 276 - 94967081 GCAAGCTAATGAACACA---ACAGTTCTCTAAAA--TT---CACTCTCCAATATCTACTGCAGAATTGCATTGGATCGTTAAAAATCAAA-GAATCTAGCCCCCTAGACCAGGCCTGCTTCCCGGGGACGCTG-CCCCGA-GTTAGGATTTCACATGACACCTCCGGCACTTCCAAAGGGCCAACCCCAGAATCGCTCCCTCCCCAGCACGTCTGGGCCCTGCGAGGCACCCCCA-GGTAAACACAGCGGCCTCCTGCGCACT-AGCCGGCGCTGCTGAGAGACGCTGC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74816843 243 + 80904711 GCAAGCTAATGACCACA---ACAGTT---TAAAA--TT---CACTCTCCAATATCTATC---GAATTGCACTGGATCATTAAAAATCAA--GAGTCTAGCCCCCTAGACCAGGCCTTCTTCCTGGGGACGCTGCCCCCGA-GCTAG----------GACACCTCTGGCGTTTCCGAAGGGCCAGCCCTAGAATCGCTCACTCCCCAGCACGTCTGGGCTGTGAGCGGCA-CCTCA-GGTAAACACAGCGGCCCC---CGAACT-AGCCCG-------------CGCTGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74625754 243 + 80997621 GCAAGCTAATGACCACA---ACAGTT---TAAAA--TT---CACTCTCCAATATCTATC---GAATTGCACTGGATCATTAAAAATCAA--GAGTCTAGCCCCCTAGACCAGGCCTTCTTCCTGGGGGCGCTGCCCCCGA-GCTAG----------GACACCTCTGGTGTTTCCAAAGGGCCAGCCCTAGAATCGCTCACTCCCCAGCACGTCTGGGCTGTGAGCGGCA-CCTCA-GGTAAACACAGCGGCCCC---CGAACT-AGCCCG-------------CGCTGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68633123 265 + 74645514 GCAAGCTAATGACCACA---ACAGTT---TAAAA--TT---CACTCTCCAATATCTATC---GAATTGCACTGGATCATTAAAAATCAAAGGAGTCTAACCCCCTAGACCAGGCCTTCTTCCTGGGGACGCTGCCCCCGA-GCTAGGATTTCACATGACACCTCTGGCATTTCCAAAGGGCCAGCCCTAGAATCGCTCACTCCCCAGCACGTCTGGGCTGTGAGCGGCA-CCTCA-GGTAAACACAGCGG-CCC---CGCACT-AGCGCG--CTGCTAAGAGACGCTGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30686802 255 - 75148670 GCAAGCTAATGACCACA---ACAGTT---TAAAA--TT---CACTCTCCAATATCTATC---GAATTGCACTGGATCATTAAAAATCAAAAGAGTCTAGCCCCCTAGACCAGGCCTTCTTCCTGGGGACGCTGCCCCCGA-ACTAGGATTTCACATGACACCTCTGGCGTTTCCGAAGGGCCAGCCCTAGAATCGCTCACTCCCTGGCACGTCTGGACTGTGAGCGGCA-CCTCA-GGTAAACACAGCGGCCCC---CGCACT-AGCCCG-------------CGCTGC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126517279 271 + 159171411 GCAAGCTAATGAAAACAGTCACAGTT---TAAAATCTT---CACTCTCTAATATCTATTGCAAAATTGCACTGGATCATT-AAAATCAAA-GAGTCTAGCACCCTAGATCAGG-CTCTTTCCTGGGGACACTGCTCCCAG-GTTAGGATTTCACATGACACCTCTGGCATTTCCAAAGGGCCAAACCCAGAATTGCTCATTCCCCAGCACACCTGGGCTGTGAGTGGCA-CCCCA-GGT-AACACAGCAACCCC---C-TGCT-AGCCCACGCTGCTAAGAGATGCTGC i calJac3.chr5 C 0 I 1443 s canFam3.chr9 57405809 260 - 61074082 GCGAGCTACTGAACACG---ACGATA---CAGAG--GTGAGCACCCTCCAAGGCCTATTGCTGAATTGCATTAGATCATTAAAAATCAGT-GAACCTGGTCCCACAGACTGGCACTCCCTGCTGGAGACGCTACCCTTGATGGGGGGGTTTCGCCTCACGCC-CTGGAGTTCCCAAAGGGCCAGCTCCAGGCTTGTTCACCATCCAGCACTTCTGGGC------------CTTCAGGGTAGACACA-CAGCCCC---CGTGTTGAGCCCA---TGCCAGCAGACGCACC i canFam3.chr9 I 747 C 0 e panTro4.chr17 76225023 2028 + 82630442 M a score=1644189.000000 s hg38.chr17_GL383566v1_alt 32797 896 + 90219 CACGACACTTCTGCCCTTGAGTCCGGTTTTGGGGATGGTTGATGTGGGGACACATGAGCGAGTGTGGCTCCTTTTGTGGACTA-GACTGCTCTGCACGCTGTGGGGTGCCAGCCTGGGAGGACC---------------------CTTTGGCCACCATCACCAGAAAGCCTTCAGCCCAAAGACCTTTCTCAGGC-GTTTACAGTTTATCCACACTTTTCCTAACAAGACTCCAACACTTCCAGTCTCTTGGGAACTAATTGGGAGGGCAAGTAAACACCTCTTCAACAGAAATGGCT-CA---GGGGGGCCTGTTGTACACCCCCCTGTGTCCCAACAAACCTCTGCCAGCCTCAAACAACTG-------------GACAAAATCCTCCTGAGGGCACCAGAAGTGAGCTGGGGTGGCTGGCGCCGCCTGGTAGGGCACAGGGCTGGTCTGCAGGGTCATGTGATTGGAGGAACAGCTTGAACTAGGTT----GCCT-GGCAGGTGGACAGGCACCTAACCCCGCAGCAGGTGCCATAAG-CGATGAAGT-GGGTGGA--GGTCTTGGGGAGCGGTAGTGCTGTTCCAGGAGCTCACTGGGCTCCATAC---CGGCAGCTTCCCCACGGTTCCAGAGTCCTCCGGGCTGC-TCGGA-GCCTGGGCACCTCCCTGTGCCATTTCAGGGCCATTTCCCTGTGTCTCT-CCCCCTCGCAGCACTTGCCGTGGGGCGCGTGAACCATGGCTACTGAGTGAAC-GCAAGAGCGTCGAGGGCTTTTGTCCTCTGACAAGTGCACACTCCCCCAGGCACCCACGTGGAATTTCAAACCCAGTCACT--------TCTTCCGGAAGACCCATAAATCGCTCCTTATTGTTGTGTGACTGTAAA--TGTGTTCTAAACATTGTCCTTTCACGCCTGCGTCCTCCCCTG---TGTGCAC---ACTT-CATTAAACGTT s ponAbe2.chr17 67324509 867 + 73212453 CATGACACTTCTGTCCTTGAGTCTGGTTTTGGGGATGGTTGACGTGGGGACACATGAGCGAGTGTGGCTCCTTTTGTGGACTA-GACTGCTCTGCACGCTGTGGGGTGCTAGCCTTGGAGGACC---------------------CTTTGGCCACCATCACCAGAAAGCCTTCAGTCCAAAGACCTTTCTCAGGC-GCTTACAGTTTATCCACACTTTTCCTAACAAGACTCCAACACCTCCAGTCTC-----------TTGGGAGGGCAAGTAAACACCTCTTCAACAGAAATGGCT-CA---GGGGGGCCTGTTGTACACCCCACTGTGTCCCAGCAAACCTCTGACAGCCTCAAACAACAG-------------GACAAAATCCTCCTGAGGGCACCGGAAGTGAGCTGGGGTGACAGGCGCCACCTGGCAGGGCACAGGGCTGGTCTGCGGGGTCATGTGATTGGAGGAACAGCTTGAACTGGGTT----GCCT-GGCAGGTGGACAGGCACCTAGCCCTGCAGCAGGTGCCATAAG-CAATGAAGT-GGGTGGA--GGTCTTGGGGAGCAGTAGTG----------------CTGGGCTCC--AC---CGGCGGCTTCCCCATGGTTCCAGAGTCCTCCGGGCTGC-TCGGA-GCCTGGGCACCTCCCTGTGCCATTTCAGGGCCATTTCCCTGTGCTGCT-CTCCCTCGCAGCACTTGCAGCGGGACACGTGAACCATGGCTGCTGAGTGAAC-ACAGGAGCGTCGAGGGCTTTTGTCCTCTGACAAGTGCACACTCCCCCAGGCACCCACGTGGAATTTCGAACTCAGTCACT--------TCTTCCGGAAGACTCATAAATCGCTCCTTATTGTTGTGTGACTGTAAA--TGTGTTCTAAACATTGTCCTTTCACGCCTGCATCCTCCCCTG---TGCGCAC---ACTT-TATTAAACATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3649313 835 - 94967081 TACGGCACTTCTGTCCTTGAGTCCGGTTTT-------------------------------------------------------------------GCTGTGGGGTGCTAGCCTTGGAGGACC---------------------CTTTGGCCACCGTCACCAGAAAGCCTTCAGCCCAAAGACCTTTCTCAGGCAGTTTACAGTTTATCCACACTTTTCCTAACAAGCCTCCAACACCTCCAGTCTCTTGGGAACAAATTGGGAGGGCAAGTAAACACCTCTTCAACAGAAATGGCTCCG---GGGGGGCCTGTTGTACACCCCACTATGTCCCAACAAACCTCTGACAGCCTCAAACAACAG-------------GACAAAATCCTCCTGAGGGCACCGGAAGTGAGCTGGGGTGACTGGCACCCCCTGGCAGGGTACAGGGCTGGTCTACAGGGTCATGTGATTGGAGGAACAGCTTGAACTGGGTT----GCCT-GGCAGGTGGACAGGCACCTGGCCCCGCGGCAGGCGCCATAAG-CGATGAAGTGGGGTGGA--GGTCTTGGGGAGCGGTAGTGCCGTCCCAGAAGCTCACTGGGCTCC--AC---CGGCAGCTTCCCCACGGTTCCAGAGTCCTCCGGGCTGCTTTGGA-GCCTGGGCACCTCCCTGTGCCATTCCAGGGCCATTTCCCTGTGCCTCTCCCCCCTCGCAGCACTCGCAGTGGGGCGCGTGAACCATGGCCACTGAGTGAAC-ACAGGAGCATCGAAGGCTTTTGTCCTCCGACGAGTGCACACTCCCCCAGGCACCCACGTGGAATTTCAAACCCAGTCACT--------TCTTCCGGAAGACCCATAAATCGCTCGTTATTGTTGTGTGACTGTAAATGTGTGTTCTAAACCTTGTCCTTTCACGCCTGCGTCCTCCCCTG---TGTGCAC---ACCT-TATTAAACGTC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74817086 908 + 80904711 TAAGAGACTTCTGTCCTTGAGTCCGGTTTTGGGGAT-GTTGACGTGGGGACAGATGAGCGAGTGTGGCTCCTTTTGTGGACTA-GCCTGCTCTGCACGCTGTGGGGAGCTAGCCTTGGAGGACC---------------------CTTTGGCCACCACCACCAGAAAGCCTCCAGTCCAGAGACCTTTCTTAGGC-GCTGACAGTTTATCCACACTTTTCCTAACAAGACTCCAACACCTCCAGTCTCTTGGGAAGTAACTGGGAGGGCAAGTAAACACCTCTTCAACAGAAGTGGCT-CGGC-GGGGGGCCTGTCGTATACCCCACTGTGTCCCAACAAACCTCTGCCAGCCTCAAACAACAG-------------GACAAAACCCTCCCAAGGGCACTGGAAGTGAGCTGGGGTGACTGGCACCCCCTGGCAGGGCACAGGGCTGGTCTGCAGGGTCATGTGATTGGAGGAACAGCTTGAACTGGGTTAGAAGCCT-GGCAGGTGGACGGGCACCTGGCCCCGCAGCAGGTGCCATAAG-TGATGAAGT-GGGTGGAGGGGTCTTGGGGAGTGGCGCTGCTGTCCCAGGAGCTCACTAGGCTCC--ACTGGCGGTGGTTTCCCCATGGTTCCAGAATCCTCCGGGCTGC-TCGGA-GCCTGGGCACCTCCCTGTGCCATTTCTGGGCCATTTCCCTGTGTCTGT-CCCCCTCGTAGCACTCGCAGTGGGGCGTGTGAACCATGGCTGCTGAGTGAACTACAGGAGCATCGAGGGCTTTTGTCCTCTGACAAGTGCACACTCCCCCAGGCACCCATGTGGAATTTCAAACCCAGTCACT--------TCTTCCGGAGAGCTGGTAGTTCGCTTTCTATTGTTGTGTGACTTTAAA--TGTGTTCTAAACATCGTCCTTTCACGCCTGCGTCCTCCCCTGTGATGTGCAC---ATTT-TATTAAACATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74625997 908 + 80997621 TAAGAGACTTCTGTCCTTGAGTCCGGTTTTGGGGAT-GTTGACGTGGGGACAGATGAGCGAGTGTGGCTCCTTTTGTGGACTA-GCCTGCTCTGCACGCTGTGGGGAGCTAGCCTTGGAGGACC---------------------CTTTGGCCACCACCACCAGAAAGCCTCCAGTCCAGAGACCTTTCTTAGGC-GCTGACAGTTTATCCACACTTTTCCTAACAAGACTCCAACACCTCCAGTCTCTTGGGAAGTAACTGGGAGGGCAAGTAAACACCTCTTCAACAGAAGTGGCT-CGGC-GGGGGGCCTGTCGTATACCCCACTGTGTCCCAACAAACCTCTGCCAGCCTCAAACAACAG-------------GACAAAACCCTCCCAAGGGCACTGGAAGTGAGCTGGGGTGACTGGCACCCCCTGGCAGGGCACAGGGCTGGTCTGCAGGGTCATGTGATTGGAGGAACAGCTTGAACTGGGTTAGAAGCCT-GGCAGGTGGACGGGCACCTGGCCCCGCAGCAGGTGCCATAAG-TGATGAAGT-GGGTGGAGGGGTCTTGGGGAGTGGCGCTGCTGTCCCAGGAGCTCACTAGGCTCC--ACTGGCGGTGGTTTCCCCATGGTTCCAGAATCCTCCGGGCTGC-TCGGA-GCCTGGGCACCTCCCTGTGCCATTTCTGGGCCATTTCCCTGTGTCTGT-CCCCCTCGTAGCACTCGCAGTGGGGCGTGTGAACCATGGCTGCTGAGTGAACCACAGGAGCATCGAGGGCTTTTGTCCTCTGACAAGTGCACACTCCCCCAGGCACCCATGTGGAATTTCAAACCCAGTCACT--------TCTTCCGGAAAGCTGGTAGTTCGCTTTCTATTGTTGTGTGACTTTAAA--TGTGTTCTAAACATCGTCCTTTCACGCCTGCGTCCTCCCCTGTGATGTGCAC---ATTT-TATTAAACATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68633388 908 + 74645514 TAAGACACTTCTGTCCTTGAGTCCGGTTTTGGGGATGGTTGACGTGGGGACAGATGAGCGAGTGTGGCTCCTTTTGTGGACTA-GCCTGCTCTGCACGCTGTGGGGAGCTAGCCTTGGAGGACC---------------------CTTTGGCCACCACCACCAGAAAGCCTCCAGTCCAGAGACCTTTCTTAGGC-GCTTACAGTTTATCCACACTTTTCCTAACAAGACTCCAACACCTCCAGTCTCTTGGGAACTAACTGGGAGGGCAAGTAAACACCTCTTTAACAGAAGTGGCT-CAGT-GGGGGGCCTGTCGTATACCCCACTGTGTCCCAACAAACCTCTGCCAGCCTCAAACAACAG-------------GACAAAATCCTCCCGAGGGCACTGGAAGTGAGCTGGGGTGACTGGCACCCCCTGGCAGGGCACAGGGCTGGTCTGCAGGGTCATGTGATTGGAGGAACAGCTCGAACTGGGTTAGAAGCCT-GGCAGGTGGACGGGCACCTGGCCCCGCAGCAGGTGCCATAAA-TGATGAAGT-GGGTGGAGGGGTCTTGGGGAGTGGCGCTGCTGTCCCAGGAGCTCACTAGGCTCC--ACTGGCGGTGGCTTCCCCATGGTTCCAGAATCCTCCGGGCTGC-TCGGA-GCCTGGGCACCTCCCTGTGCCATTTCTGGGCCATTTCCCTGTGTCTGT-CCCCCTCGTAGCACTCGCAGTGGGGCGTGTGAACCATGGCTGCTGAGTGAAC-ACAGGAGCATTGAGGGCTTTTGTCCTCTGACAAGTGCACACTCCCCCAGGCACCCATGTGGAATTTTAAACCCAGTCACT--------TCTTCCGGAAAACCGGTAGTTCGCTTTCTATTGTTGTGTGACTTTAAA--TGTGTTCTAAACATCGTCCTTTCACGCCTGCGTCCTCCCCTGTGATGTGCAC---ATTT-TATTAAACGTT i papAnu2.chr16 C 0 I 372 s chlSab2.chr16 30687057 909 - 75148670 TAAGAGACTTCTGTCCTTGAGTCCGGTTTTGGGGATGGTTGACGTGGGGACAGATGAGCGAGTGTGGCTCCTTTTGTGGACTA-GCCTGCTCTGCACGCTGTGGGGAGCTAGCCTTGGAGGACC---------------------CTTTGGCCACCACCACCAGAAAGCCTCCAGTCCAGATACCTTTCTTAGGC-ACTGACAGTTTATCCACACTTTTCCTAACAAGACTCCAACACCTCCAGTCTCTTGGGAACTAACTGGGAGGGCAAGTAAACACCTCTTTAACAGAAGTGGCT-CGGCGGGGGGGCCTGTCGTATACCCCACTGTGTCCTAACAAACCTCTGCCAGCCTCAAACAACAG-------------GACAAAATCCTCCCAAGGGCACTGGAAGTGAGCTGGGGTGACTGGCACCCCCTGGCAGGGCACAGGGCTGGTCTGCAGGGTCATGTGATTGGAGGAACAGCTTGAACTGGGTTAGAAGCCT-GGCAGGTGGACGGGCACCTGGCCCCACAGCAGGTGCCATAAG-TGATTAAGT-GGGTGGAGGGGTCTTGGCGAGCGGCGCTGCTGTCCCAGGAGCTTACTAGGCTCC--ACTGGCGGTGGCTTCCCCATGGTTCCAGAATCCTCCGGGCTGC-TCGGA-GCCTGGGCACCTCCCTGTGCCATTTCTGGGCCATTTCCCTGTGTCTGT-CCCCCTCGCAGCACTTGCAGTGGGGCGTGTGAACCATGGCTGCTGAGTGAAC-ACAGGAGCATCGAGGGCTTTTGTCCTCTGACAAGTGCACACTCCCCCAGACACCCACGTGGAATTTCAAACCCAGTCACT--------TCTTCTGGAAAGCCAGTAGTTCGCTTTCTATTGTTGTGTGACTTTAAA--TGTGTTCTAAACATCGTCCTTTCACGCCTGCGTCCTCCCCTGTGATGTGCAC---ATTT-TATTAAACGTT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57406069 832 - 61074082 CACGAGACTTCTGTCCTTACGCTTGGTTTCTGGGATGGTGGTCGTGGGGACAGCT----CACTGTGCGTCCTTTTGTGGACAAGGACAGCCAAGCA-GCTGCAGTGCCGTGGCCTGGGAGGACCCACGGACCAGCCAGGCTGCTGCGTCTGCCACCGTCACCAGGAAACTCCCAATCCAGTGACCTCTGTCAGAG-GCTG-CAGCTCGTCAACAC--TTCCTGGCAAGGCTCCCACACCCCCAGACCCTTGGGAACCCACTGAGAGG------------CTGTTCAACAGAAATGGCT-CA---GGGGAGCCCAGGGTGTGTGGCCCCGTGCCCCAG-AAGGTTCCACCAGCCTCAAATGACAGCTTCTTTCCAGCCAACAGAGCCC-----AGGAGACTGGAGGTGAGT----------------------CAGGGCACAGGCCTGGTCTGCAGAGGCACGTGAGTCCAGGAACCCCCTGAACTCGGCTGGGAGCCTCGGCAGGTGCACGGTGGCCCGGCCTCGCGGCAGGGGCAGTAAACCGATGAAGA-GAGCTGA--GGTCTCGGGGTGGGGAGCCGAT-------------------CGCC--AAGGACAGCGGCCTCCTCGCAGTTCCAGAATCCTCTGGGCCGG-TCCAAGGCCTGGGCACCG-CCTGGGCTGTCCCAGGTC------------------ACCCCGGGTGGCTTCTGTGGTGGGTCGTGTGTATCTGAGAAG----GTGCCCCCCGGGAGCCCCAGGGGC-TCTGTCCTCTGACGAG----------------CATCCATGTGGGGTTTCCAACACAGCCACTCCCTGGCCCCCTTGGTAAGAGCCATAAATTGCTCTTTACTGT--TGCCACTGTACC--TTTATTCTGGAT--------------CCCACATCCT-CCGTGAGATCTGTACTTGATTTATATTATGTAtt i canFam3.chr9 C 0 C 0 e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=428755.000000 s hg38.chr17_GL383566v1_alt 33693 213 + 90219 GAAAACaactctttattatggaaaatctcaacctccggagagtgcagacagcagccttatgaacgcctccggatccagcctctatatttaacaatcgctaacattttgccatatttgcttcatctggttttcttttctaaactaatctaaagtcagttactgtctctgtgacatttccccctaaatcttttttagacattttcttttaaaaat- s ponAbe2.chr17 67325376 213 + 73212453 GAAAACAACTCTTTATTATGGAAAATCTCAACCTCCGGAGAGTGCAGACAGCAGCCTCATGAACGCCTCCGGATCCAGCCTCTATATTTAACAGTCgctaacattttgccgtatttgcttcatctggttttcttttctaaactagtccaaagtcagttactgtctgtgtgacatttccccctaagtcttttttagacattttcttttaaaaat- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3650148 208 - 94967081 GAAAACaactctttattatggaaaatctcagcctccggagagtgcagacagcagtcttatgaacacctccggatccagcctctatatttaacagccgctaacattttgccatatttgcttcatctggttttcttttctaaact-----aaagtcagttactgtctgtgtgacatttccccctaaatcttttttagacattttcttttaaaaat- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74817994 208 + 80904711 GACAACAACTCTTTattatggaaaatctcaacctcgggagagtgcagacagcagccttctgaacgcctccagatccagcctctatatttaacagttgctaacattttgccatatttgcttcatctggttttcttttCTAAACT-----AAAGTCAGTTACTGTCTGTGTGACATTTCCCCCTAAATCTTTTTTAGACATTTTCttttaaaaat- i rheMac3.chr16 C 0 I 218 s macFas5.chr16 74626905 208 + 80997621 GACAACaactctttattatggaaaatctcaacctcgggagagtgcagacagcagccttctgaacgcctccagatccagcctctatatttaacagttgctaacattttgccatatttgcttcatctggttttcttttctaaact-----aaagtcagttactgtctgtgtgacatttccccctaaatcttttttagacattttcttttaaaaat- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68634668 208 + 74645514 gacaacaACTCTTTATTATGGAAAATCTCAACCTCGGGAGAGTGCAGACAGCAGCCTTCCGAACGCCTCCAGATCCAGCCTCTATATTTAACAGTTgctaacattttgccatatttgcttcatctggttttcttttctaaact-----aAAGTCAGTTACTGTCTGTGTGACATTTCCCCCTAAATCttttttagacattttcttttaaaaat- i papAnu2.chr16 I 372 C 0 s chlSab2.chr16 30687966 208 - 75148670 GACAACaactctttattatggaaaatctcaacctcgggagagtgcagacagcagccttacgaacgcctccagatccagcctctatatttaacagttgctaacattttgccatatttgcttcatctggttttcttttctaaact-----aaagtcagttactgtctgtgtgacatttccccctaaatcttttttagacattttcttttaaaaat- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57406901 203 - 61074082 -aaaac-------tatcatgcaaaatttcaaacacatggaagagtacagagccacatcacgaaggcctccatatccatcacctatatttaacagttgctgacactctgacgtacttggtttgtttgg---aaaaatctaaatcattTTAAAGTAAATGACTGTCTTTGTGACATTTCCACCTAAAGTATTCGAGGACACATATCTTCACAAAGT i canFam3.chr9 C 0 C 0 e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=17973.000000 s hg38.chr17_GL383566v1_alt 33906 14 + 90219 gacattttctttta s ponAbe2.chr17 67325589 14 + 73212453 gacattttctttta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3650356 14 - 94967081 gacattttctttta i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74627113 14 + 80997621 gacattttctttta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68634876 14 + 74645514 gacattttctttta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30688174 14 - 75148670 gacattttctttta i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57407104 14 - 61074082 GACAACCAACAACA i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74818202 218 + 80904711 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=64024.000000 s hg38.chr17_GL383566v1_alt 33920 30 + 90219 ctgaaccacaataccatgatcacagctaac s ponAbe2.chr17 67325603 30 + 73212453 ctgaaccacaataccattatcacagctaac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3650370 30 - 94967081 ctgaaccacaataccattatcacagctaac i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74818420 30 + 80904711 ctgaaccacaatgccattatcacagctaac i rheMac3.chr16 I 218 C 0 s macFas5.chr16 74627127 30 + 80997621 ctgaaccacaatgccattatcacagctaac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68634890 30 + 74645514 ctGAACCACAATGCCATTATCACAGCTAAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30688188 30 - 75148670 ctgaaccacagtgccattatcacagctaac i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57407118 29 - 61074082 -TGGACCATAATGCCCTGATGCCGTTTAAC i canFam3.chr9 C 0 I 353 e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=191343.000000 s hg38.chr17_GL383566v1_alt 33950 104 + 90219 aaaattaaccctgattttctaatatcatg---gcctgcccagtccatgtttgtttggttgtctcccaaatggcttttccagctgggtttgttcaaaacaggatccca s ponAbe2.chr17 67325633 107 + 73212453 aaaattaaccctgatTTTCTAATGTCATGTCCTCCTGCCCAGTCCATGTTTGTTTGGTTGTCTCCCAAATGGCTTTTCCAGCTGGGCTTGTTCAAAACAGGATCCCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3650400 104 - 94967081 aaaattaaccctgattttctaacgtcatg---tcctgcccagtccatgtttgtttggttgtctcccaaatggcttttccagctgggcttgttcaaaacaggatccCA i nomLeu3.chr14 C 0 M 1003 s rheMac3.chr16 74818450 104 + 80904711 aaaattaaccctgattttctaatgtcatg---tcctgcccagtccatgtttgtctggttgtctcccaaatggcttttcccgctaggcttgttcaaaacagggtccca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74627157 104 + 80997621 aaaattaaccctgattttctaatgtcatg---tcctgcccagtccatgtttgtctggttgtctcccaaatggcttttcccgctaggcttgttcaaaacagggtccca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68634920 104 + 74645514 AAAATTAACCCTCATTTTCTAATGTCATG---TCCTGCCCAGTCCATGTTTGTCTGGTTGTCTCCCAAATGGCTTTTCCCGCTAGGCTTGTTCAAAACAGGgtccca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30688218 104 - 75148670 aaaattaaccctgattttctaatgtcatg---tcctgcccagtccaggtttgtctggttgtctcccaaatggcttttcccgctaggcttgttcaaaacagggtccca i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57407147 353 - 61074082 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=388896.000000 s hg38.chr17_GL383566v1_alt 34054 321 + 90219 ggctgggcgcggtggcttatgcctgtaatcccggcactttgggaggctgaagtgggcggattatctgaggtcaggagttcgagaccagtctcaccaatgtagtgaaatcccacctctact--------------------aaaagcaca-aaaaaaaattagccgggcctggtggagcatgcctgtaatcccagctacttgggaggctgagacaggagaatcacttgaacctgggaagaggaggttgaagtgagctgagatcatgccactgcactccagcctgggcgacagagcaagactctgtcttaaaaaataaaaat-aaacaaacaaaacccaggatcc s ponAbe2.chr17 67325740 322 + 73212453 ggctgggcgcggtggcttatgcctgtaatcccggcactttgggaggccaaagcgggtggattatctgaggtcaggagttcaagaccagtctcaccaatatggtgaaaccccatctctaca--------------------aaaagcacacacaaaaaattagccgggcctggtggagcatgcctttaatcccagctacttgggaggctgagacacgagaatcacttgaacctgggaagaggaggttgaagtgagcggagatcatgccactgcactccagcctgggtgacagagcaaggctctgtcttaaaaaacaaaaat-aaacaaacaaaaCCCAGGATCC i ponAbe2.chr17 C 0 M 248 s rheMac3.chr16 74818554 327 + 80904711 ggctgggtgtggtggctcacgcctgtaatccccgcactttgagaggccaaggcgggtggattatctgaggtcaggagtttgagaccagtctgatcaatatggtgaaaccccatctctact---------------aaaaatacaaaaaa-aaaaaaaattagccgggactggtggctcatgcctgtaatcccagctactggggaggctgagacaggagaatctcttgaacctgggaggaggagcttgcagtgagctgagatcacaccactgcactccagcctgggcgacagagcaagactctgtctcaaaaaataaaaataaaataaacaaaacccaggatcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74627261 331 + 80997621 ggctgggtgcggtggctcacgcctgtaatccccgcactttgggaggccaaggcgggtggattatctgaggtcaggagtttgagaccagtctgatcaatatggtgaaaccccatctctact-----------aaaaaaaaaaaaaaaaaa-aaaaaaaattagccgggactggtggtgcatgcctgtaatcccagctactggggaggctgagacaggagaatctcttgaacctgggaggaggagcttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagcaagactctgtctcaaaaaataaaaataaaataaacaaaacccaggatcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68635024 340 + 74645514 ggctgggtgtggtggctcacgcctgtaatccccgcactttgggaggccaaggtgggtggattatctgaggtcaggaatttgagaccagtctgatcaatatggtgaaaccccatctctactaaaaatacaaaaaaaaaaaaaaaaaagaa-aagaaaaattagccaggactggtggcgcatgcctgtaatcccagctactggggaggctgagacaggagaatctcttgaacctgggaggaagagtttgcagtgagctgagatcacgccactgcactccagcctgggtgacagagcaaga--ctgtctcaaaaaataaaaataaaataaacaaaacccagGATCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30688322 332 - 75148670 ggctgggtgcggcggctcacgcctgtaatccccgcactttgggaggccaaggcggatggattatctgaggtcaggagtttgagactagtctgatcaatatggtgaaaccccatctctact--------aaaaatacaaaaaaaagaaaa-aagaaaaattagccgggactggtggcgcatgcctgtaatcccagctactggggaggctgagacaggagaatctcttgaacctgggaggaggagcttgcagtgagctgagatcacgccactgcactccagcctgggtgacagagcaaga--ctgtctcaaaaaataaaaataaaataaacaaaacccaggatcc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3650504 1003 - 94967081 M e canFam3.chr9 57407147 353 - 61074082 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=44972.000000 s hg38.chr17_GL383566v1_alt 34375 72 + 90219 tgataaggtgcatgcgttgcatttggtggtttcatctcttagtcacctttaacctgctgcctcctttgtttt s rheMac3.chr16 74818881 63 + 80904711 tgat-aggcaaatgcaatgcatttggtggtttcatttcttaatcacctttaatatgctgccac--------t i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74627592 65 + 80997621 tgat-aggcaaatgcaacgcatttggtggtttcatttcttaatcccctttaatatgctgcccc------ttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68635364 66 + 74645514 TGAT-AGGCACATGCGATGCATTTGGTGGTTTCATTTCTTAATCACCTTTAATAtgctgccac-----tttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30688654 65 - 75148670 tgat-aggcacatgcgatgcatttagtggtttcatttcttaatcacctttaatatgctgccac------ttt i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3650504 1003 - 94967081 M e canFam3.chr9 57407147 353 - 61074082 I e ponAbe2.chr17 67326062 248 + 73212453 M e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=442666.000000 s hg38.chr17_GL383566v1_alt 34447 352 + 90219 ttttttcttttaatttttttttgagacggagtctcattctgttgcccaggctggagtgcagtggcacaacctcagctcactgcagcctccacctcccaggttcaaacgattctcctgcctcagcctcctgagtggctgggattacaggtgcctggcaccacgtgcggctaatttttgtatttttagtagagacgaggttttgccatgttggccaggctggtctcgaactcctgacctcaggtgatctgcccgcctcagcctcccaaagtgctgagattacagatgtgagccaccgcatccggccatcctgtgttttcatgtctgactgtggaagagactgggtt-ggcgggct s ponAbe2.chr17 67326319 352 + 73212453 tttttttttttaattcttttttgagacggagtctcactctgttacccaggctggagtgcagtggcacaaccttggctcactgcagcctccacctcctgggttcaaacgattctcctgcctcagcctcctgagtggctgggattacaggcgcctgccaccacgcccggcgaatttttgtatttttagtagagacgaggtttcgccatgttggccaggctggtctcgaactcctgacctcaggcgatccgcctgcctcagcctcccaaagtgctgggattccaggtgtgagccaccgcgtccggccGTCCTGTGTTTTCATGTCTGACTGTGGAAGAGATTGGGTT-GGGGGGCT i ponAbe2.chr17 M 248 C 0 s rheMac3.chr16 74818944 353 + 80904711 ttttttttttttaattttttttgagacggagtctcactctgttgcccaggctggagtgcagtggtacaaccttggctcactgcagcttccgtctcccgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccagtgcgcccagctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggccagcctcgaacccacgacctcaggcgatccacctgtcttggccttccaaagtgctgggattacaggtgtgagccaccgcagccgtccgtcctttgtttccatggctgactgtggaagagactgggttaggggggct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74627657 353 + 80997621 ttttttttttttaattttttttgagacggagtctcactctgttgcccaggctggagtgcagtggtacaaccttggctcactgcagcttccgtctcccgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccagcgcgcccagctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggccagtctcgaacccctgacctcaggcgatccacccgtcttggccttccaaagtgctgggattacaggtgtgagccaccgcagccgtccgtcctttgttttcgtggctgactgtggaagagactgggttaggggggct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68635430 353 + 74645514 ttttttttttttaattttttttgagatggagtctcactctgttgcccaggctggagtgcagtggtacaaccttggctcactgcagcttccgtctcccgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcctgccagcgcgtccagctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggccagtctcgaacccctgacctcaggtgatccgcccgtcttggccttccgaagtgctgggattacaggtgtgagccaccgcagccgtCCGTCCTTTGTTTTCATGGCTGACTGTGGAAGAGACTGGGTTAGGGGGGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30688719 353 - 75148670 ttttttttttttaattttttttgagacggagtctcactctgttgcccaggctagagtgcagtggtacaaccttggctcactgcagcttccgtctcccgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacgggtgcctgccagcgtgcccagctaatttttgtatttttagtagagacgaggtttcaccatgttggccagactggtctcgaacccctgacctccggtgatccgcccatcttggccttccaaagtgctgggattacaggtgtgagccaccgtggccggccgtcctttgttttcatggctgactgtggaagagactgggttgggggtgct i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3650504 1003 - 94967081 M e canFam3.chr9 57407147 353 - 61074082 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=1415923.000000 s hg38.chr17_GL383566v1_alt 34799 793 + 90219 gtggacttgcaaggcatcca---ttcagggtcagcctggctgcttcctctggctgtggtatacatacgctgttgcttgttgtggcctatgaagttgaagttagagctaaactaggtctgataagattcaggttgtgctttcaggccagagggtcttataggtCATCAGAAGCACATTATGggccagatgtggtgactcacacctgtaatcccagcactttggaagcccgaggcaggaggaccgcttaagtctaggagttctgagaccagcctgggcaatacagtaagatcctgttgctacaaaaattttttaaaaagtggctaggtgtgttggcatgtgcctgtaatcccagctacttgggaggcagaggtgggagaatctcctgagctcaggaggttgaggctgcagtgagctgtgattgcaccactgcactcagcctgggtgacagagtgagactctgtctcc--aaaaaaaaa-----TGAAGGCACATCATGACTCTCGGGATTCTGAGGTTGGTCCCTGGTTTTGAGGTGAGAGCTGGTCCTCTCCATTGTTAGAGCTACCTCTTCCCTATTGGAGGCACCAAGTAAACCCAGGAGGACACATTGGCACAGGGTGAGCGCCCAGCTCCCTGCCAGCCTGTCACCAATATCCCCTCACCCCAAAACAATCCATGGCAACACATGGCTGGGCTTCCACAGTCTCTCCCTGCACACTCATCACACCAGGGGCTGAACCCCATGTGGGCTCAGTGCAGTCACCCCACTACATAATAAACGTTCCTCCAGCATTCAAAGCATT s ponAbe2.chr17 67326671 791 + 73212453 GTGGACTTGCAAGGCATCCAACTTTCAGGGTCAGCCTGGCTGCTTCCTCTGGCTGTGGGATACATACTCTGTTGCTTGATGTGGCCTATGAAGTTGAAGTTAGAGCTAAACTAGGTCTGATAAGATTCAGGTTGGGCTTTCAGGCCAGAGGGTCTTATAGGTCATCAGAAGCACATTATGggccagaggtggtggctcacacctgtaatcccagcactttgggaggccgaggcaggaggaccacttaagcctaagagttctgagaccagcctgggcaacacagcaagatcctgttgctacaaaaaatttttaaaaaatagctaggtgtgttggcatgtgcctgtaatcc-agctacttggaaggcagaggtgggagaatcacctgagctcaggaggttgaggctgcagtgagctgtgattgcaccactgcactcagcctgggcaacagagtgagactctgtctcc--aaaaaaaaaaaaaaTGAAGGCACATCATGACTCTCGGGATTCTAAGGTTAGTCCCTGGTTTTGAGGTGAGAGCTGGTCCTCTCCATTGTTAGAGCTACCTCTTCCCTATTGGAGGCACCAA-------TAGG--GACACACTGGCACAGGGTGAACGCCCAGCTCCCTGCCAGCCTGTCACCAATATCCCCTAACCCCAAAACAATCCATGGCAACACATGGCTGGGCTTCCACAGTCTCTCCCTGCACGCTCATCACACCAGGGGCTGAACCCCATGTGGGCTCAGGGCAGTCACTCCACTACATAATAAACGTTCCTCCAGCATTCAAAGCATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3651511 795 - 94967081 GTGGACTTGCAAGGCATCCACCTttcggggtcagcctggctgcttcctccggttgtggtatacatattctgttgcttcatgtggcctatgaagttgaagttagagctaaactaggtctgataagattcaggttggactttcaggccagagggtcttacaggtCATCAGAAGCACATTATGggccagatgtggtggctcacacctgtaatcacagcactttggaaggccaaggcaggaggaccacttaagcctaggagttctgagaccagcctgggcaacacagtaagatcctgttgctacaaaaaaattttttaaagtagctaggtgtgttggcatttgcctgtaatcc-agctatgtgggaggcagaggtgggagaatctcctgagctcaggaggtggaggctgcagtgagctctgattgcagcactgcactcagcctgggtgacagagtgagacactgtctcc--aaataaaaa-----TGAAGGTACATCATGACTCTCGGGATTTTAAGGTTAGTCCCTGGTTTTGAGGTGAGAGCTGGTCCTCTCCATTGTTAGAGCTACCTCTTCCCTATTGGAGGCACCAAGTAAACCCAGGTGGATACAATGGCACAGGGTGAACACCCAGCTCCCTGCCAGCCTGTCACCAATATCCCCTCACCCCAAAACAATCCGTGGCAACACATGGCTGGGCTTCCACAGTCTCTCCCTGCACGCTCATCACACCAGGGGCTGAACCCCACGTGGGCTCAGGGCAGTCACCCCACTACATAATAAACGTTCCTCCAGCATTCAAAGCATT i nomLeu3.chr14 M 1003 C 0 s rheMac3.chr16 74819297 792 + 80904711 gtgggcttgcaaggcatccaaccttcagggtcagcctggctgcctcctctggctgtggtatacatactctgttgcttgatgtggcctatgaagtcgaagttagagctaaactaggtctgataagattaaggttggactttcaggccagagggtcttataggtCATCAGAAGCACATTATGggccagatgtggtggctcacacctgtaatcccggcacttt-aaaggccgaggcaggagaaccgcttaagcctaggagttctgagaccagcctgggcaacacagcaagatcctgttgctacaaaaaagttttaaaaagtagctaggtgtgttggcatgtgcctgtaatcccagttacttgggaggcagaggtgggagaatcacctgagctcaagaggttgaggctgcagtgagctgtgattgcaccaccacactcagcctgggcgacagagtgagactctgtctccaaaaaaaaaaa-----TGAAGGCACATTATGACTCTCGGGATTCTAAGGTTAGTCCCTAGTTTTGAGGTGAAAGCTGGTCCTCTCCATCGTTAGAGCTACCTCTTCCCTATTGAGGGCACCAAGTAAACCCGGGAGGACACATTGGCACAGGGTGACC-----GCTCCCTGCCAGTCTGTCACCAATATCCCCTCACCCCAAAACAATCCATGGCAACACATGGCTGGGCTTCCACAGTCTCTCCCTGCACGCTCATCATGCCAGGGGCTGAACCCCATGTGGGCTCAGAGCATTCACCCCACTACATAATAAACGTTCTTCCAGCATTCAAAGCATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74628010 791 + 80997621 gtgggcttgcaaggcatccaaccttcagggtcagcctggctgcctcctctggctatggtatacatactctgttgcttgatgtggcctatgaagtcgaagttagagctaaactaggtctgataagattaaggttggactttcaggccagagggtcttataggtCATCAGAAGCACATTATGggccagatgtggtggctcacacctgtaatcccggcacttt-aaaggccgaggcaggagaaccgcttaagcctaggagttctgagaccagcctgggcaacacagcaagatcctgttgctacaaaaaagtttaaaaaagtagctaggtgtgttggcatgtgcctgtaatcccagttacttgggaggcagaggtgggagaatctcctgagctcaagaggttgaggctgcagtgagctgtgattgcaccaccacactcagcctgggcgacagagtgagactctgtctcc-aaaaaaaaaa-----TGAAGGCACATTATGACTCTCGGAATTCTAAGGTTAGTCCCTAGTTTTGAGGTGAAAGCTGGTCCTCTCCATCGTTAGAGCTACCTCTTCCCTATTGAGGGCACCAAGTAAACCCGGGAGGACACATTGGCACAGGGTGACC-----GTTCCCTGCCAGTCTGTCACCAATATCCCCTCACCCCAAAACAATCCATGGCAACACATGGCTGGGCTTCCACAGTCTCTCCCTGCACGCTCATCATGCCAGGGGCTGAACCCCATGTGGGCTCAGAGCATTCACCCCACTACATAATAAACGTTCTTCCAGCATTCAAAGCATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68635783 789 + 74645514 GTGGGCTTGCAAGGCATCCAACCTTCAGGGTCAGCCTGGCTGCTTCCTCTGGCTGTGGTATACATACTCTGTTGCTTGATGTGGCCTATGAAGTCGAAGTTAGAGCTAAACTAGGTCTGATAAGATTAAGGTTGGACTTTCAGGCCAGAGGGTCTTATAGGTCATCAGAAGCACATtatgggccagatgtggtggctcacacctgtaatccc-gcacttt-aaaggccgaggcaggaggaccgcttaagcctaggagttctgagaccagcctgggcaacacagcaagatcctgttgctacaaaaaagttttaaaaagtagctaggtgtgttggcatgtgcctgtaatcccagttacttgggaggcagaggtgggagaatctcctgagctcaagaggttgaggctgcagtgagctgtgattgcaccaccgcactcagcctgggcgacagagtgagactctgtctcc--aaaaaaaaa-----tgaaggcacaTTATGACTCTCGGGATTCTAAGGTTAGTCCCTAGTTTTGAGGTGAAAGCTGGTCCTCTCCATTGTTAGAGCTACCTCTTCCCTACTGAGGGCACCAAGTAAACCCGGGAGGACACATTGGCACAGGGTGACC-----GTTCCCTGCCAGTCTGTCACCAATATCCCCTCACCCCAAAATAATCCATGGCAAGACATGGCTGGGCTTCCACAGTCTCTCCCTGCACGCTCATCATGCCAGGGGCTGAACCCCATGTGGCCTCAGAGCATTCACCCCACTACATAATAAACGTTCCTCCAGCATTCAAAGCATT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30689072 790 - 75148670 gtgggcttgcaaggcatccaaccttcggggtcagcctggctgcttcctctggctgtggtatacatactctgttgcttgatgtggcctatgaagtcgaagttagagctaaagtaggtctgataagattaaggttggactttcaggccagagggtcttataggGCATCAGAAGCACATCATGggccagatgtggtggctcacacctgtaatcccggcacttt-aaaggccgaggcaggaggaccgcttaagcctaggagttctgagaccagcctgggcaacacggcaagatcctgttgctacaaaaaagttttaaaaagtagctaggtgtgttggcatgtgcctgtaatcccagttacttgggaggcagaggtgggagaatctcttgagctcgagaggttgaggctgcagtgagctgtgattgcaccactgcactcagcctgggtgacagagtgagactctgtctcc-aaaaaaaaaa-----TGAAGGCACATTATGACTCTCGGGATTCTAAGGTTAGTCCCTAGTTTTGAGGTGAGAGCTGGTCCTCTCCATTGTTAGAGCTACCTCTTCCCTATTGGGGGCACCAAGTAAACCCGGGAGGACACATTGGCACAGGGTGAAC-----GCTCCCTGCACGTCTGTCACCAATATCTCCTCACCCCAAAATAATCCATGGCAAGACATGGCTGGGCTCCCACAGTCTCTCCCTGCACGCTCATCATGCCAGAGGCTGAACCCCATGTGGCCTCAGAGCATTCA-TCCACTACATAATAAACGTTCCTCCAGCATCCAAAGCATT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57407147 353 - 61074082 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=253150.000000 s hg38.chr17_GL383566v1_alt 35592 129 + 90219 TCTTAATGGAAGGAGGTCCCCAGATGCATTTACAGCCTTGGTTCCAAACCTCAGGGCCGCCTGTGTGTAGTATTCTATAAAACTGGTTCCTTAAGAATCCACTTTGAAggcc----ggatgc-ggtggttcaac s ponAbe2.chr17 67327462 117 + 73212453 TCTTAATGGAAGGAGGTCCCCAGATGCATTTACAGCCTTGGTTCCAAACCTCAGGGCCGCCTGTGTGTAGT------------TGGTTCCTTAGGAATCCACTTTGAAggcc----gggtgc-ggtggttcaac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3652306 129 - 94967081 TCTTAATGGAAGGAAGTCCCCAGATGCATTTACAGCCTTGGTTCCAAACGTCAGGGCCGCCTGTGTATAGTATTCTATAAAACTGGTTCCTTAGAAATCCACTTTGAAggct----ggatgc-ggtggttcaac i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74820089 129 + 80904711 TCTTAATGGAAAGAGGTCCCCAGATGCATTTACAGCCTTGGCTCCAAACCTCAGGGCCACCTGTGTATCATATTCTATAAAACTGGTTCCTTAAGAATCCACTTTGAAggcc----ggatgc-ggtggttcaac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74628801 129 + 80997621 TCTTAATGGAAGGAGGTCCCCAGATGCATTTACAGCCTTGGCTCCAAACCTCAGGGCCACCTGTGTATCATATTCTATAAAACTGGTTCCTTAAGAATCCACTTTGAAggcc----ggatgc-ggtggttcaac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68636572 129 + 74645514 TCTTAATGGAAGGAGGTCCCCAGATGCATTTACGGCCTTGGCTCCAAACCTCAGGGCCACCTGTGTATCGTATTCCATAAAACTGGTTCCTTAAGAATCCACTTTgaaggcc----ggatgt-ggtggttcagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30689862 129 - 75148670 TCTTAATGGAAGGAGGTCCCCAGATGCATTTACAGCCTTGGCTCCAAACCTCAGGGCCACCTGTGTATAGTATTCTATAAAACTGGTTCCTTAAGAATCCACTTTGAAggct----ggatgc-agtgtttcaac i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57407500 123 - 61074082 TCTCAGTGCCAGGAGA---------GTGTCTGCAGCTTCGATTCCAGACCTCAGACCAACCTGTTTATGATGTTCTATCAACTTGGCCCCTTAAGAGTCCACCTC--AGGCCTCTGAGCTGCTGGGGGTTCGAC i canFam3.chr9 I 353 I 3 e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=393260.000000 s hg38.chr17_GL383566v1_alt 35721 229 + 90219 cctgtgatcccagcactttgggaggctgaggtggtcggattgcttgaggccaggagttcgagaccagcctgggcaacacagtgagaccttgtctctacaaaaaataATAATAATCATAACTAAAAATAAATTACTTTTGAAAAATCCCCATAGTGAGGTTAGTATGAAAC--------AAACAAAC---AAAAAAAAGAATCCACTTTGAAACCC-TGTGGCCTACTGGGGTTTTGACATG s ponAbe2.chr17 67327579 237 + 73212453 cctgtgatcccagcactttgggaggctgaggtggtcagattgcttgaggccagcagttcgagaccagcctgggcaacacagtgagaccctgtctctacaaaaaataATAATAATCATAACTAAAAATAAGCTACTTTTTAAAAATCCCTATAATGAGGTTAGTATTAAACCAAAAAGTAAAAAAAA---AAAAAAAAGAATCCAATTTGAAACCC-TGTGGCCTACTGGGGTTTTGACATG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3652435 225 - 94967081 cctgtgatctcagcactttgggaggctgaggtggtcggattgcttgaggccaggagttcaagaccagcctgggcaacacagtaagaccctgtctctacaaaa---aataATAATCATAACTAAAAATAAATTACTATTGAAAAATCCCCATAATGAGGTTAGTATGAAAC----------AAAAAT---AAAAAAAAAAATCCACTTTGAAACCCATGTGGCCTACTGGGGTTTTGACATG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74820218 230 + 80904711 cctgtgatcccagcactttgggaggctgaggtggtcagattgcttgaggccaggagttctagaacagcctgggcaacacagtgagaccctgtctctacaaaaagtaataataatcaTAACTAAAAATAAGTTACTTTTGAAAAATCCCCATAATGATGTTAGTATGAAAC----------aaaaatttaaaaaaaaaaaatCCACTTTGAAACCT-TGTGGCCTAGTGGGGTTTTAACATG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74628930 230 + 80997621 cctgtgatcccagcactttgggaggctgaggtggtcagattgcttgaggccaggagttctagaacagcctgggcaacacagtgagaccctgtctctacaaaaagtaataataatcaTAACTAAAAATAAGTTACTTTTGAAAAATCCCCATAATGATGTTAGTATGaaac----------aaaaattaaaaaaaaaaaaaTCCACTTTGAAACCT-TGTGGCCTAGTGGGGTTTTAACATG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68636701 227 + 74645514 cctgtgatcccagcactttgggaggctgaggtggtcagattgcttaaggccaggagttctagaacagcctgggcaacacagtgagaccctgtctctacaaaaagtaataataatcataacTAAAAATAAGTTACTTTTGAAAAATCCCCATAATGATGTTAgtatgaaac----------aaaatt---aaaaaaaaaaatccactttgaAACCT-TGTGGCCTAGTGGGGTTTTAACATG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30689991 230 - 75148670 cctgtgatcccagcactttggaaggctgaggtggtcagattgcttgaggccaggagttctagaacagcctgggcaacacagtgagaccctgtctctacaaaaagtaataataatcaTAACTAAAAATAAGTTACTTTTGAAAAATCCCCATAATGATACTAGTATGaaac----------aaaaataaaaaaaaaaaaaaTCCACTTGGAAACCT-TGTGGCCTAGTGGGGTTTTAACATG i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57407623 3 - 61074082 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=41148.000000 s hg38.chr17_GL383566v1_alt 35950 20 + 90219 ATTGGAGCAGTGAGGCATGG s ponAbe2.chr17 67327816 20 + 73212453 ATCGGAGCAGTGAGGCATGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3652660 20 - 94967081 ATTGGAGCAGTGAGGCATGG i nomLeu3.chr14 C 0 M 100 s rheMac3.chr16 74820448 20 + 80904711 ATCAGAGCAGTGAGGCATGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74629160 20 + 80997621 ATCAGAGCAGTGAGGCATGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68636928 20 + 74645514 ATCAGAGCAGTGAGGCATGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30690221 20 - 75148670 ATCAGAGCAGTGAGGCATGA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57407626 19 - 61074082 ATCAGAGCAGTGAGAAGGG- i canFam3.chr9 I 3 C 0 e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=25645.000000 s hg38.chr17_GL383566v1_alt 35970 19 + 90219 AGGGTGG----GCTGGGCTGGGG s ponAbe2.chr17 67327836 19 + 73212453 AGGGTGG----GCTGGGCTGGGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74820468 19 + 80904711 AGGGTGG----GCTGGACTGGGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74629180 19 + 80997621 AGGGTGG----GCTGGACTGGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68636948 19 + 74645514 agggtgg----gctgggctgggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30690241 19 - 75148670 CGGGTGG----GCTGGGCTGGGG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57407645 22 - 61074082 ACGGTGGCGGCGTGGGGCAGGG- i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3652680 100 - 94967081 M e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=149758.000000 s hg38.chr17_GL383566v1_alt 35989 70 + 90219 GGCTCAGCCAGGAGCGTGGAGCAGAGTGATAAGAATCAGAGCAGGGTGATAgaggggacggggag---------gggag s ponAbe2.chr17 67327855 70 + 73212453 GGCTCAGCCAGGAGCCTGGAGCAGAGTGATAAGAATCAGAGCAGGGTGCTAgaggggacggggag---------gggag i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3652780 70 - 94967081 GGCTCAGCCAGGAGCGTGGAGCAGAGTGATAAGAATCAGAGCAGGGTGATAGAGGGGATGGGGAG---------GGGAG i nomLeu3.chr14 M 100 C 0 s rheMac3.chr16 74820487 70 + 80904711 GGCTCAGTCAGGAGCCTGGAGCAGAGTGACAAGAATCAGAGTAGGGTGTTAgaggggatgtggag---------gggag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74629199 70 + 80997621 GGCTCAGTCAGGAGCCTGGAGCAGAGTGACAAGAATCAGAGTAGGGTGCTAGAGGGGATGTGGAG---------GGGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68636967 70 + 74645514 ggctCAGTCAGGAGCCTGGAGCAGAGTGACAAGAATCAGAGCAGGGTGCTAGAGGGGATgtggag---------gggag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30690260 70 - 75148670 GGCTCAGTCAGGAGCCTGGAGCAGAGTGACAAGAATCAGAGCAGGGTGCTAGAGGGGATGTGGAG---------GGGAG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57407667 78 - 61074082 GACCCAGCCAGG-GCTGGGGGCAGAGTGTCAAGACCCAGGGCAGAGTGCTGGGGGCGAGGGGGAGGCAGTGCTCGGGAG i canFam3.chr9 C 0 C 0 e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76225023 2028 + 82630442 M a score=190422.000000 s hg38.chr17_GL383566v1_alt 36059 95 + 90219 ggcagaggTGATCAACATTGTAGAAGAC--AGGAGGGT---GGAGAGAAAAAGAGAGGGAGCAGAG------GGAGTT-GGGGAAAGGAGAGG------------------------------------------------------------------------------------GGATGTGGTTAGAG s panTro4.chr17 76227055 94 + 82630442 GGCAGAGGTGATCAACATTGTTGAAGAC--AAGAGGG----GGAGGGAAAA-GAGAGGGAGCAGAG------GGAGTTTGGGGAAAGAAGAGG------------------------------------------------------------------------------------GGATGTGGTTAGAG i panTro4.chr17 M 2028 C 0 s ponAbe2.chr17 67327925 95 + 73212453 ggcagaggtgatcaacattgtagaagac--gggagggt---ggagagaaaaagagagggagcagag------ggagtt-ggggaaaggagagg------------------------------------------------------------------------------------ggaTGTGGCTAGAG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3652850 179 - 94967081 GGCAGAGGTGATCAACATCGTAGAAGAC--AGGAGGGT---GGAGAGAAAAAGAGAGGGAGCAGAG------GGAGTT-GGGGAAAGGAGAGGGAGCAGAGGGAGTTGGGGAAAGGAGAGGGAGCAGAGGGAGTTGGGGAAAGGAGAGGGAGCAGAGGGAGTTGGGGACAGGAGAGCGGACGTGGTCACAG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74820557 97 + 80904711 ggcagaggtgatcaacattgtagaagacagaggagggt---ggagagaaaaagagagggggcggag------ggagtt-ggggaaaggagagg------------------------------------------------------------------------------------ggGTGTGGTCAGAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74629269 97 + 80997621 GGCAGAGGTGATCAACATTGTAGAAGACAGAGGAGGGT---GGAGAGAAAAAGAGAGGGAGCGGAG------GGAGTT-GGGGAAAGGAGAGG------------------------------------------------------------------------------------GGGTGTGGTCAGAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68637037 96 + 74645514 ggcagaggtgATCAACATTGTAGAAGACAGAGGAGGGT---GGACAGAAAAAGAGCGGGAGCGGAG------GGAgtt-ggggaaaggaga-g------------------------------------------------------------------------------------gggtGTGGTCAGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30690330 97 - 75148670 GGCAGAGGTGATCAACATTGTAGAAGACAGAGGAAGGT---GGAGAGAAAAAGAGAGGGAGCAGAG------GGAGTT-GGGGGAAGGAGAGG------------------------------------------------------------------------------------GGCTGTGGTCAGAG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57407745 90 - 61074082 --------------GGAATGTGGAGGCC--GGAGGGATCCGTGCAAGGGAGGGACGGGCAGCTAAGGTCCGTGAAGTT-CAGGGCAAGTGGGG------------------------------------------------------------------------------------AGGTGGGGGCTGAG i canFam3.chr9 C 0 I 2004 e calJac3.chr5 126517550 1443 + 159171411 I a score=793894.000000 s hg38.chr17_GL383566v1_alt 36154 373 + 90219 CTTTGGGAAGGAAATGTGGAGGGCCCAGCCAGACTCTGAGAGTCCGTGTAGGCGCGGGACAGGTGTCACAGTTCATCTCCGCAAAGGTCGGGTGCATGGTGAGGAGGTGACGTGACTGAGAGACAGCACAGTGCCCGGAAGAGAGAAGGGTTTCAAGTCATTTTGGCAGGACACAGCGGCACGCACAGCC-CGCCCAGACCTAGTCCCCTCGCTCTCCTCCACAGAGCCCCAGGGAGCAGCTGTGGGCTTCCCTGTGGCCGAGACCAGCCTTTGGCCTG----GTGTGTACGTGTGTG----TGTGCATATGTTTATATGA----GTATGTATGTCAGTATG----TGTATGAGCATGTGTAAAT--ATATATGTGTATATCTGTGTACACA s panTro4.chr17 76227149 379 + 82630442 CTTTGGGAAGGAAATGTGGAGGGCCCAGCCAGACTCTGAGAGTCCGTGTAGGCACGGGACAGGTGTCACAGTTCATCTCCGCGAAGGTCGGGTGCATGGTGAGGAGGTGACGTGACTGAGAGACAGGACAGTGCCCGGAAGAGAGAAGGGTTTCAAGTCATTTTGGCAGGACACAGCGGCACGCACAGCC-CGCCCAGACCTAGACCCCTCGCTGTCCTCCACAGAGCCCCAGGGAGCAGCCGTGGGCTTTCCTGTGGCCGAGACCAGCCTTTGGCCTGgtgtgtgtgtgtgtgtgtg----tgtgcatatgtt--tatga----gtatgtatgtcagtatgtgtatgtatgagcatgtgtgcat--atatatgtgtatatctgtacacata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67328020 382 + 73212453 CTTTGGGAAGGAAATGTGGAGGGCTCAGCCAGACTCTGAGAGTCCGTGCAGGCGAGGGACAAGTGTCACAGTTCATCTCCACAAAGGTCGGGTGCATGGTGAGGAGGTGACGTGACTGAGAGACAGCACAGTGCCCGGAAGAGAGAAGGGTTTCAAGTCATTTTGGCAGGACACAGCGGCACGCACAGCC-TGCCCAGACC--GACCCCTCGCTCTCCTCCACAGAGCCCCAGGGAGCAGCCCTGGGCTTCCCTGTGGCTGAGACCAGCCTTTGGCCTGGTGTGTGTGTGTGTGTGCG----CGTGCATATGTTAATAGAA-tatgtatgtatgtcaatatgtgtatgtatgagcatgtgtgcat--atatatgtatatatctgtgtaCACA i ponAbe2.chr17 C 0 I 500 s nomLeu3.chr14 3653029 385 - 94967081 CTTTGGGAAGGAAGTGTGGAGGGCCCAGCCAGACTGTGAGAGTCCGTGCAGACGAGGGACAAGTGTCACAGTTCATCTCCGCAAAAGTCAGGTGCATGGTGAGGAGGTGATGTGACTGAGAGACAGCACAGTGCCTGGAAGAGAGAAGGGTTTCAAGTCATTTTGGCAGGACACAGCGGCACGCACAGCC-CGCCCAGACCCAGACCCCTCGCTTTCCTCCACAGAGCCCCAGGGAGCAGCCCTGGGCTTCCCTGTGGCCGAGACCAGCCTTTGGCCTGgtgtgtgtgtgtgtgtgtgcacacgcgcatatgtttatatgagtatgtatgtatgtcagtatg----tgtatgagcatgtgtgcat--atatatgtgtatatctgtgtacaca i nomLeu3.chr14 C 0 I 4 s rheMac3.chr16 74820654 383 + 80904711 CTTTGGGAAGGAAATATGGAGGGCCCAGCCAGACTCTGAGAGTTCGTGCAGGTGAGGGACAAGTGTCACAGTTCATCTCTGCAAAGGTCAAGTGCATGGTGAGGAGGTGATGTGACT--GAGACAGCACAGTGCCTGGAAGAGAGAAAGGTTTCAAGTCATTTTGGAAGGACACAGC-GCACGCACAGCACCCCCCAGACCCAGACCCCTCGCTCTCCTCCACAGAGCCCCAGGGAGCAGCCCTGGGCTTCCCTGTGGCTGAGACCAGCCTTTGGCTTGGtgtgtgtgtctgtatgtg------tgcatatgtttatatgagtatgtatgtatatcagtatgtgtatgtatgagcatgtgtgcatgcatatatgtgtatatctgtgtacaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74629366 373 + 80997621 CTTTGGGAAGGAAATATGGAGGGCCCAGCCAGACTCTGAGAGTTCGTGCAGGTGAGGGACAAGTGTCATAGTTCATCTCTGCAAAGGTCAAGTGCATGGTGAGGAGGTGATGTGACT--GAGACAACACAGTGCCTGGAAGAGAGAAAGGTTTCAAGTCATTTTGGAAGGACACAGC-GCACGCACAGCGCCCCCCAGACCCAGACCCCTCGCTCTCCTCCACAGAGCCCCAGGGAGCAGCCCTGGGCTTCCCTGTGGCTGAGACCAGCCTTTGGCCTGgtgtgtgtgtctgtatgtg------tgcatatgtttatatgagtatgtatgtatatcagtatgtgtatgtatgagcatgtgtgcatgcatatatgtgtatatc---------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68637133 311 + 74645514 CTTTGGGAAGGAAATGTGGAGGGCCCAGCCAGACTCTGAGAGTTCGTGCAGGTGAGGGACAAGTGTCACAGTTCATCTCTGCAAAGGTCAGGTGCATGGTGAGGAGGTGATGTGACTGAGagacagcacagtgcctggaagaGAGAAGGGTTTCAAGTCATTTTGGAAGGACACAGC-GCACGCACAGCGCCCCCCAGACCCAGACCCCTCGCTCTCCTCCACAGAGCCCCAGGGAGCAGCCCTGGGCTTCCCTGTGGCTGAGACCAGCCTTTGgcctggtgtgtgtgtctgtgtgtg------tgcatatgtttata-------------------------------------------------------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30690427 382 - 75148670 CTTTGGGAAGGAAATATGGAGGGCCCAGCCAGACTCTGAGAGTTCGTGCAGGCGAGGGACAAGTGTCACAGTTCACCTCCGCAAAGGTCAGGTGCATGGTGAGGAGGTGATGTGACT--GAGAGAGCACAGTGCCTGGAAGAGAGAAGGGTTTCAAGTCATTTTGGAAGGACACAGC-GCACGCACAGCA-CCCCCAGACCCAGACCCCTCGCTCTCCTCCACAGAGCCCCAGGGAGCAGCCCTGGGCTTCCCTGTGGCTGAGACCAGCCTTTGGCCTGGTGTGTGTGTCTGTGTGTG------TGCATATGTTTATATGAGTATGTATGTATGTCAGTATGTGTATGTATGAGCCTGTGTGCATGCATATATGTGTATATCTGTATACACA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57407835 2004 - 61074082 I e calJac3.chr5 126517550 1443 + 159171411 I a score=94398.000000 s hg38.chr17_GL383566v1_alt 36527 185 + 90219 TTGTGTGCACACATGTGTATGTGTAtatgtgtgca----tgtatgtgtccacgtgtatgtgcatgtatgtgtacatatgtgtgtatggatgtgtgcatATGAGCATGTGTCTG------------------------------------------------------TGTC--TGTATGCCCATGTGTATGTGC--ATGTATGTGTACATGTGTGTATGAATGTGTGCATATGAGC-----ATGCGTATGTG s panTro4.chr17 76227528 231 + 82630442 ttgtgtgcacac--gtgtatg----tatgtgtgca----tgtatgcgtccacgtgtatgtgcatgtatgtgtacatatgtgtgtatgaatgtgtgcatatgagcatgtctgtgtatgtgtatgtgcatgtatgtgtacatgtgtgtatgaatgtgtgcatatgagcatgtctgtgtatgcccatgtgtatgtgc--atgtatgtgtacatgtg----tgaatgtgtgcatatgagc-----atgcgtatgtg i panTro4.chr17 C 0 I 2 s nomLeu3.chr14 3653418 153 - 94967081 ttgtgcgcacac--gtg--------tgtgtatgca----ggtatgtgtccacgtgtatgtgtatgtatgtgtacatatgtgtgtatgaatgtgtgcatatgagcatgcgtatg------------------------------------------------------------------------tgtgtgtgc--atgtttatatacgtgta----t--atatgtccatataagc-----atgcgtatgtg i nomLeu3.chr14 I 4 C 0 s rheMac3.chr16 74821037 155 + 80904711 -------tacat--gtgcata----tgtgtgcacatgagtatatgt------ctgtatgtgtgtgtatgtgtacctatgtgtgtatggatgtgtgCATATGAGCATGTGTGTA--------------------------------------------------------------TCTGCCCACgtgtatgtgc--atgtatgtgtatatgta--------tgtgtgc-tatgagc-----atgtgtatgtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74629739 124 + 80997621 -------------------------tgtgtacaca----tacatgt------gcatatgtgtgcacatgagtatatgtgtctgtatg--tgtgtgtatgtg----------------------------------------------------------------------------tacctatgtgtatatgg--atgtgtgcatatgagca--------tgtgtgtatctgccc-----acgtgtatgtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68637444 128 + 74645514 -------------------------tgagtatgta----tgtatgt------cagtatgtgtatgtatgagcatgtgtgcatgcatatatatgtatatctg----------------------------------------------------------------------------tgtacacatacatgtgcatatgtgtgcacatgagta--------tatgtgtctgtatgt-----gtgtgtatgtg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30690809 159 - 75148670 -------TATAG--GTGCATA----TGTGTGCACATGAGTATATGT--------GTCTGTATGTGTATGTGTACCTATGTGTGTATGGATGTGTGCATATGAGCATGTGTGTA--------------------------------------------------------------TCTGCCCACGTGTATGTGC--ATGTATGTGTACATGTG--------TGTATGAATATGTGCTACGAGCATGTGTGTG i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I e calJac3.chr5 126517550 1443 + 159171411 I a score=108775.000000 s hg38.chr17_GL383566v1_alt 36712 237 + 90219 TGTGTGCGTGTTTACG--TGTATGTGTGCATATGAGCATGTGTATGTCTATGCAAGTGCGTATGTGTCCACGTGTGTATGTGTACAT----------------------------ATGTGTATATGTGTGCATGAGCATGTC------TGTGCATGTCTATATACATGTATATGAACGTGTGCATATAAGCAGGTGTA--------TGTGTGTGCATGTGTGTTTATATGTGTATGT--------GTGCATAT--GAGCATTGTATAT------GTATGTGTG--TGCATGTGTGTTTA s panTro4.chr17 76227761 241 + 82630442 tgtgtgcgtgtttacg--tgtatgtgtgcatatgagcatgtgtatgtCtatgcaagtgcgtatgtgtccacgtgtgtatgtgtac------------------------------atgtgtatatgtgtgcatgagcatgtgtctgtatgtgcatgtctatatacatgtatatgaacgtgtgcatataAGCAtgtgta--------tgtgtgtgcatgtgtttatatgtgtatatgt--------gtgcatat--gagcattgtatat------gtgtgtatg--tgcatgtgtgtgtg i panTro4.chr17 I 2 I 2 s rheMac3.chr16 74821192 218 + 80904711 tgtgtatgtgtttacgtttatatgtgtgc--atgagcatgtgtatgtgtatgcaagtgtgta----------tgtttatgtgtcca----------------------------cgtgtgtatgtatgtgtaca--------------tgtg--------------tgtatatgaatgtgtgCATATGAgcatgtgtc--------tgtatgtgcatgtgtgtctatatatgtatat--gaatgtgtgcatat--aagca-tgtgtatgggcaggtacgtatgactgtgcatgtgttta i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74629863 193 + 80997621 catgtatgtgtatatg----tatgtgtgc-tatgagcatgtgtatgtgtgtgtatgtgttta----------cgtttat------------------------------------atgtgtgcatatgagcatg--------------tgta--------------tgtgtatgcaagtgtgtat----gtttgtgtc--------cacgtgtgtatgtatgtgtacatgtgtgtataggaatgtgtgcatat--gagca-tgtgtct----------gtatg--tgcatgtgtgtcta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68637572 199 + 74645514 tacctatgtgtgtatg----gatgtgtgcatatgagcatgtgtgtatctgcccatgtgtatg----------tgcatgt------------------------------------atgtgtatatgtgtgtatg--------------tgtgc-----------tatgagcatgtgtatgtgtatgtgtttacgttta--------tatgtgtgcatatgagcatgcgtatgtgtat--gcaagtgtgtatgt----tta-tgtgtcc--------acgtgtg--tatgtatgtgtaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30690968 268 - 75148670 TGCATGTGTGTTTACATTTATATGTGTGCATATGAGCATGTGTAAGTGTATGCAAGTGTCTATGTGTCCACGTGTGTATGTGTACATATGTGTATATGAATGTGTGCATACGAGCATGTGTCTGTATGTGCATG--------------TGTGT------CTATACGTGTATATGAATGTGTGCATATAAGCATGTGTATGTGCAGGTATGTATGTGCATGTGTTTATATGTGTATAT--GAATGTGTACATATGAGAGTA-TGTGTGT------TCATGTATG--TGTGTGCATGTGTC i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3653571 0 - 94967081 C e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I e calJac3.chr5 126517550 1443 + 159171411 I a score=23985.000000 s hg38.chr17_GL383566v1_alt 36949 45 + 90219 TATGTGCATATGAATGTGTGCAT-TGAGCGTGTATGTGCGTG----TGTC s rheMac3.chr16 74821410 48 + 80904711 tatgtgtatatgaatgtgtgcatatGAG--tgtgtgtgtgcatgtatgtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74630056 50 + 80997621 tatatgtatatgaatgtgtgcatataagcatgtgtatgggcaggtatgta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68637771 42 + 74645514 tatgtgtatatgaatgtgtgcatatgagcatgtgtctg--------tatg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30691236 46 - 75148670 TATATGTTTATGAATGTGTGCATATGAGTGTGTATGTGTGCA----TGTG i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3653571 0 - 94967081 C e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76228002 2 + 82630442 I a score=41167.000000 s hg38.chr17_GL383566v1_alt 36994 43 + 90219 TGTGCATGTGTTTATG--TGTATATGAATGTGTGCATATGAGCGT s nomLeu3.chr14 3653571 43 - 94967081 tgtgcacgtgtttatg--tgtatatgaatgtgtgcatatgagcat i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74821458 44 + 80904711 tgcatgtgtgtttatatatgtatatgaatgtgtgcatatgagag- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74630106 45 + 80997621 tgactgtgtgtttatatgtgtatatgaatgtgtgcatatgtgtgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68637813 45 + 74645514 tgcatgtgtgtctatatatgtatatgaatgtgtgcatataagcat i papAnu2.chr16 C 0 I 12 s chlSab2.chr16 30691282 43 - 75148670 TGTGTCTGTGTTTATA--TGTATATGAATGTGTGCATATGAGCGT i chlSab2.chr16 C 0 I 51 e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76228002 2 + 82630442 I a score=19769.000000 s hg38.chr17_GL383566v1_alt 37037 42 + 90219 GTGTGTATGTGTTTATATGTGTATATGTGTGCATATGAGCAT s nomLeu3.chr14 3653614 37 - 94967081 gcgtatgtgtgtgtgcatgtttatatatgtgtatata----- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74821502 35 + 80904711 -------tgtgtgcatgtgtgtttatatatgtatatgaatgt i rheMac3.chr16 C 0 I 1 s macFas5.chr16 74630151 42 + 80997621 gcatgtatgtgtgcatgtgtgtttatatatgtatatgaatgt i macFas5.chr16 C 0 I 1 s papAnu2.chr16 68637870 42 + 74645514 gtatgtatgtctgtgcatgtgtttatatgtgtatatgaatgt i papAnu2.chr16 I 12 I 1 e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I e calJac3.chr5 126517550 1443 + 159171411 I e chlSab2.chr16 30691325 51 - 75148670 I e panTro4.chr17 76228002 2 + 82630442 I a score=16772.000000 s hg38.chr17_GL383566v1_alt 37079 30 + 90219 TGTATATGTATGTGTGTGCAT----GTATGTGTG-- s nomLeu3.chr14 3653651 30 - 94967081 tgtccacataagcatgtgtat----gtgtgtgca-- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74821538 36 + 80904711 tgcatatgagtgtgtgtgcatgtaggtgtgtctgtg i rheMac3.chr16 I 1 C 0 s macFas5.chr16 74630194 36 + 80997621 tgcatatgagtgtgtgtgcatgtaggtgtgtctgtg i macFas5.chr16 I 1 C 0 s papAnu2.chr16 68637913 28 + 74645514 tgcgtatgagtgtgtgt--------gtgcatgtgtg i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 30691376 32 - 75148670 TGTGCATGAGTGTGTGTGCAT----GTGTGTCTGTG i chlSab2.chr16 I 51 C 0 e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I e calJac3.chr5 126517550 1443 + 159171411 I e panTro4.chr17 76228002 2 + 82630442 I a score=63797.000000 s hg38.chr17_GL383566v1_alt 37109 63 + 90219 --CATGTGTTTATATGTGCATATGAATGTGTGCATTGAGCGTG----TGTGTATGTGCGTGTATGTG----CA s panTro4.chr17 76228004 57 + 82630442 --catgtgtttat--gtgcatatgaatgtgtgcattgagcgtg----tgt--atgtgcatgtatgtc------ i panTro4.chr17 I 2 C 0 s nomLeu3.chr14 3653681 62 - 94967081 --tgtgtgtttatatgtgcatatgaatgcata---tgagcatg----tgt--atgtgtatgtatgtgcgtgca i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74821574 60 + 80904711 catgtgtgtttatatatgtatatgaatgtgtg-------cata----tgt--gtgtgCatgtatatctgtgca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74630230 60 + 80997621 catgtgtgtttatatatgtatatgaatgtgtg-------cata----tgt--gtgtgcatgtatatctgtgca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68637941 60 + 74645514 catgtgtgtttatatatgtatatgaatgtgtg-------cata----tgt--gtgtgcatgtatatctgtgca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30691408 60 - 75148670 CATGTGTGTT----TATGTATATGAATGTGTG-------CATATGTGTGT--GTGTGCATGTGTGTCTGTGCA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I e calJac3.chr5 126517550 1443 + 159171411 I a score=1208646.000000 s hg38.chr17_GL383566v1_alt 37172 616 + 90219 TGTGTGTT--TATATGTGTATATGAATGTGTGCATATGAGCGTGT--------GTTTGCATGTATGTCTATGCATGTGTGTTCATATATGTGTGTATGAATGTGTGCATATGAGCATGTGAATGTGTGTCCCTATGCACATGTGTATATGTTTGTATGTGTGT----TTGTG---GCATGTGGCTCTGGGGACACAGGGCTATAGGTGGTCCCATGACTCTTCTCCATCTCATCCCCGTGACAGCTGCCCCTACCAAGTCCTGTGCTCCCTCTTACCTCTTCCCTGGGATGACAGTGGTCACTTTCCCCATGTTTTGGATGGGGCCTGCTT----------GTCCCCAA-----CGTCCTTTAGCACGAAGGGGACAGGTGTCC------TATTC-----------CTGTGAATGGCCGGTTACCTTCCAGGTGC----GTTAGAGTGGCTCCTCTAACCAGCCCTGCAGGGATCTTATTAGATCTTATTAGAGTGGCTCCTCTAACCACCCCTGCA-GGGGGGAAGTGAGGAGCCGCAGGGCTGTGGAGGGGTCCAGGTGTCACGGCCAGGACTTGTACCCGAGCCCGACA-------------------CGGGCGGACCCAGGTGTGCGGGGATCCAGCCCAGGTGTGCCGGTGGCGGCCGCCCCCACGGAACCACCTGGCCCGCTC s panTro4.chr17 76228061 589 + 82630442 tgcatgtt--tatacgtgtatatgaatgtgtgcatatgagcgtgt----------ttgcatgtatgtctatgcctgtgtgttcatatatgtgtatatgaatgtgtgcatatgagcatgtgaatgtgtgtccctatgcatatgtgtatatgtttgtgtgtgtgtgtgtttgtg---GCATGTGGCTCTGGGGACACAGGGCTGTAGGTGGTCCCATGACTCTTCTCCATCTCATCCCCGTGACAGCTGCCCCTACCAAGTCCTGTGCTCCCTCTTACCTCTTCCCTGGGATGACAATGGTCACTTTCCCCACGTTTTGGATGGGGCCCGCTT----------GTCCCCAA-----CGTCCTTTAGCACGAAGGGGACAGGTGTCC------TATTC-----------CTGTGAACGGCCGGTTACCTTCCAGGTGC----GTTAGAGTGCCTCCTCTAACCAGCCCTGCAGGG-------------------------------------------------GGGAAGTGAGGAGCCGCAGGGCTGTGGAGGGGTCCAGGTGTCACGGCCAGGACTTGTACCCGAGCCCGACAGGAGTGTCCGCCCGCAGCGTGGGCGGACCCAGGTGTGCGGGGATCCAGCCCAGGTGTGCCGGTGGCAGCCGCCCCCACGGAACCACCTGGCCCGCTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3653743 627 - 94967081 tgtgtgtttatatatgtgcatatgaatgtgtgcat-taagcgtgtgtgtacgtgtgtgcatgtatgtc--tgcatgtgtgtttatatatgtgtgtatgaatgtgtgcatatgagcatgtgaatgtgtgtccctatgcatatgcgtatatgtttgtatgtgtgtgtgtttgtg---GCATGTGGCTCTGGGGACACAGGGCTATAGGTGGTCCCATGACTTTTCTCCATCTCATCCCCGTGACAGCTGCCCCTACCGAGTCCTGTGCTCCCTCTTACCTCTTCCCTGGGATGACAGTGGTCACTCTCCCCACGTTTTGGATGGGGATGTCCTTTGGCACGAAGTCCTTTAGCAGCTGTCCCTTAGCACGAAGGGGACAGGTGTCC------TATTC-----------CTGTGAACGGCTGGTTACCTTCCAGGTGC----GTTAGAGTGGCTCCTCTAACCAGCCCTGCAGGGATCTTATTA----------------------------------CA-GGGAGGAAGTGAGGGGCCGCAGGGCCGTGGAGGGGTCCAGGTGTCACGGCCAGGACTTGTACCCGAGCCCGACAGGAGCGTCCACCCGCAGCGCGGCCGGACCCAGGTGTGCGGGCATCCAGCCCAGGTGTGCCGGTGGCGGACGCCCCCACTGAACCACCTGGCCCGCTC i nomLeu3.chr14 C 0 M 933 s rheMac3.chr16 74821634 614 + 80904711 catgtgtttatatgtgtgtatatgaatgtgtacatACAAGCgtgt------gtgtgtgcatgtatgtg--tgcatgtatgtgtgtatatgtgtgtatgaatgtgtgcatataagcatgtgtatgtgtgtctctatgcatatgtgtatacgtttgtatgtgtgCATATTTGTG---GCATGTGGCTGTGGGGACACAGGGCCATAGGTAGTCCCATGACTCTTTTCCATCTCATCCCTGTAACAACTGCCCCTACCGAGTCCTGTGCTCCCTCTTCCCTCTTCCCTGGGATGACAATGGTCAGTCTCCCCACGTTTTGGATGAGGCCCGCTT----------GTCCCCAA-----AGTCCTTCAGCACGAAGGCGACAGGTGTCCGTGGACGACTA-----------CTGTGAACGGCCCTTTACCTTCCAGGTGC----GTTAGAGCGGCTCCTCTAACCAGCCCTGCAGGGATCTTATTA----------------------------------CAGGGGGGAAAGTGAGGGGCCGCAGGACTGCGGAGGGGTCCAGGTGTCACGGCCAGGACTTGAACCCGAGCCCAACAGGAGCGCCCACCCTCAGCGCGGCCAGACCCAGGTGTGCGGGCATCCAGCCCAGCTGTGCGGATGGCGCCCGCCCCCACGGAATCACCTGGCCCGCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74630290 614 + 80997621 cacgtgtttatatgtgtgtatatgaatgtgtacatacaagcgtgt------gtgtgtgcatgtatgtg--tgcatgtatgtttgtatatgtgtgtatgaatgtgtgcatatgagcatgtgtatgtgtgtctctatgcatatgtgtatacgtttgtatgtgtgcatatttgtg---gcatgtggctgtgGGGACACAGGGCCATAGGTAGTCCCATGACTCTTTTCCATCTCATCCCTGTAACAACTGCCCCTACCGAGTCCTGTGCTCCCTCTTACCTCTTCCCTGGGATGACAATGGTCAGTCTCCCCACGTTTTGGATGAGGCCCGCTT----------GTCCCCAA-----AGTCCTTCAGCACGAAGGCGACAGGTGTCCGTGGACGACTA-----------CTGTGAACGGCCCTTTACCTTCCAGGTGC----GTTAGAGCGGCTCCTCTAACCAGCCCTGCAGGGATCTTATTA----------------------------------CAGGGGGGAAAGTGAGGGGCCGCAGGACTGCGGAGGGGTCCAGGTGTCACGGCCAGGACTTGAACCCGAGCCCGACAGGAGCGCCCACCCTCAGCGCGGCCAGACCCAGGTGTGCGGGCATCCAGCCCAGCTGTGCGGATGGCGCCCGCCCCCACGGAATCACCTGGCCCGCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68638001 614 + 74645514 tatgtgtttatatgtgtgtatatgaatgtgtacatacaagcatgt------gtgtgtgcatgtatgtg--tgcatgtatgtttgtatatgtgtgtatgaatgtgtgcatatgagcatgtgcatgtgtgtctctatgcatatgtgtatacgtTTGTACGTGTGCATATTTGTG---GCATGTGGctgtggggacacagggccaTAGGTAGTCCCATGACTCTTTTCCATCTCATCCCTGTGACAACTGCCCCTACCGAGTCCTGTGCTCCCTCTTACCTATTCCCTGGGATGACAGTGGTCAGTCTCCCCACGTTTTGGATGAGGCCCGCTT----------GTCCCCAA-----AGTCCTTCGGCACGAAGGCGACAGGTGTCCGTGGACGACTC-----------CTGAGAACGGCCCGTTACCTTCCAGGTGC----GTTAGAGCGACTCCTCTAACCAGCCCTGCAGGGATCTTATTA----------------------------------CAGGGGGGAAAGTGAGGGGCCGCAGGACTGCGGAGGGGTCCAGGTGTCACGGCCAGGACTTGAACCCGAGCCCCACAGGAGCGCCCACCCTCAGCGCGGCCAGACCCATGTGTGCGGGCATCCAGCCCAGCTGTGCGGATGGCGCCCGCCCCCATGGAACCACCTGGCCCGCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30691468 601 - 75148670 TGTGTGTTTATAAGTGTGTAT----ATGTGTGCATATGAGC--GT------GTGTGTGCATGTATGTG--TGCATGCGTGTT----TATATGTGTATGAATGTGTGCATATGAGCATGTGTATGTGTGTCTCTATGCATATGTGTATACATTTGTATGTGTGCATATTTGTG---GCATGTGGCTGTGGGGACACAGGGCCATAGGTAGTCCCATGACTCTTTTCCATCTCATCCCTGTGACAACTGCCCCTACCAAGTCCTGTGCTCCCTCTTACCTCTTCCCTGGGATGACAATTGTCAGTCTCCCCACGTTTTGGATGAGGCCCGCTT----------GTCCCCAA-----AGTCCTTCAGCACGAAGGCGACAGGTGTCCGTG---GACTC-----------CTGTGAACGGTCCGTTACCTTCCAGGTGC----ATTAGAGCGGCTCCTCTAACCAGCCCTGCAGGGATCTTATTA----------------------------------CAGGGGGGAAAGTGAGGGGCCACAGGACTGCGGAGGGGTCCAGGTGTCACGGCCAGGACTTGAACCCGAGTCCGACAGGAGCGCCCACCCTCAGCGCGGCCAGACCCAGGTGTGCGGGCATCCAGCCCAGCTGTGCGGATGGCGCCTGCCCCCACGGAACCACCTGGCCCGCTC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126518993 593 + 159171411 --tatgtgtacgtgtgtgtatatgaatgtgtacataggagcatgt----------ttccatgtgtctatatgcatgtgtgtt----tatgtgtatagcaatgtgtgcatataagc------atgtgtgtccc--tgcatacgtgtatatgtttgtatgtgtgtatgtttgtgGCAGCAGGTAGCTCTGGGGACACAGGGCCATAGGTGGTCCTACGACTCTTCTCCATCTCATCCCGGTGACAGCTGCCCCTACCGAGT----------------CCTCTTCCCTGAG-TGACGTGGGTCACTCTCCCCACGTTTTTGATGAGGACTGCTT----------ATCCCCAA-----AGTCCTTCAGCACAAAGGTGACAGGTGTCCATGGACTATTCCATGGTCGTAACTGCTAACAGCCAGTTACGTTCCAGGTGCGTTTGTTCGGGTAGCTCCTCTAACCTACCCTGCAGGTATCTTATTA----------------------------------CA-GGGGGGAAATGAGGGGC----GTGCTGTGGAGGGGTCCAAGTGTCACGGCCAGGACTTGAACCCGAGCCCTGCAGGAGCGCGCACCCGCAGC-CAGTCGGACCCAGGCGTGCGAGCATCCAGCCCAGCTGTGCCGGCGGCACCCACACCCAGGGAACCACCTGGCCCGCTC i calJac3.chr5 I 1443 C 0 e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I a score=2100.000000 s hg38.chr17_GL383566v1_alt 37788 1 + 90219 G s panTro4.chr17 76228650 1 + 82630442 G i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74822248 1 + 80904711 G i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74630904 1 + 80997621 G i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68638615 1 + 74645514 G i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30692069 1 - 75148670 G i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126519586 1 + 159171411 G i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3654370 933 - 94967081 M e canFam3.chr9 57407835 2004 - 61074082 I e ponAbe2.chr17 67328402 500 + 73212453 I a score=1445495.000000 s hg38.chr17_GL383566v1_alt 37789 664 + 90219 GGGACCCAGGTGTGCTGAGAAGGGGGTACTGGC--GTTGGCCCGGCGTGAAAGGTCACCCTGCACCCCCGCACCCAGGTGAGGCGGGCGCGGGATCCCGGTTGCCACAGGCATCGGAGCGGCCGGGAGCGGGGGCAGGGGGAGGCAATGAGAACTCCCGGGGAGGGGGCTCGCAGGGGCCGCATCGGACGCCTGGGCCGGCGGGGCAGAGGGAGGCGCCCTGCTCTCCGGTC-----------------------CCTCCCTTTG-----------CCTCCCTCCCGCCCCGGGCGCCGCCTGCGGGAGCCGACTCGTTCCAGGGGAGGCAGCGCCACCTGCTGGAGTGTGCGCGTCTGCGCACCGGGCCGGGTTCCGCAGGTCCTGGGGCTGCGCCCGAGACCCCCGACCGAGTCTTCGGCGCCTCCAGCGCTTCCCCGGCGTCTTGGGCTGCGAGGGGCCCTT-TCCGCAGGGCGATGTTTTAGCAGTTCTGGGAGGAAGGGCCCACTGCCGTTGCCCTCTGAGGACCGAGGCCGAGAGCCTGGAGGGCGTGGAGAAGGGTCTGACCGCCGGCTCTGGTCCTCGGGCTCTTGGCGACAGCGACCTCCCTCCTCCTCCGGGCGATGGTGACGGGCGCTCTC----AGAGTGGCGGCCACACTAGGCGCAGGGCCGTCTTCCAAGTGTGTGGTCCTCTCAGAcct s panTro4.chr17 76228651 664 + 82630442 GGGACCCAGGTGTGCTGAGAAGGGGGTACTGGG--GTTGGCCCGGCGTGAAAGGTCACCCTGCACCCCCGCACCCAGGTGAGGCGGGCGCGGGACCCCGGTTGCCACAGGCATCGGAGCGGCCGGGAGCGGGGGCAGGGGGAGGCAATGAGAACTCCCGGGGAGGGGGCTCGCAGGGGCCGCATCGGACGCCTGGGCCGGCGGGGCAGAGGGAGGCGCCCTGCTCTCCGGTC-----------------------CTTCCCTTTC-----------CCGCCCTCCCGCCCCGAGCGCCGCCTGCGGGAGCCGACTCGTTCCAGGGGAGGCAGCGCCACCTGCCGGACTGTGCGCGTCTGCGCACCGGGCCGGGTTCCGCAGGTCCTGGGGCTGCGCCCGAGACCCCCGACCGAGTCTTCGGCGCCTCCACCGCTTCCCCGGCGTCTTGGGCTGCGAGGGGCCCTT-TCCGCAGGGCGATGTTTTAGCAGTTCTGGGAGGAAGGGCCCACTGCCGTTGCCCTCTGAGGACCGAGGCCGAGAGCCTGGAGGGCTTGGAGAAGGGTCTGACCGCCGGCTCTGGTCCTCAGGCTCTTGGCGACAGCGACCTCCCTCCTCCTCCGGGCGATGGTGACGGGCGCTCTC----AGAGTGGCTGCCACACTAGGCGCAGGGCCGTCTTCCAAGTGTGTGGTCCTCTCAGAcct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67328902 625 + 73212453 GGGACCCAGGTGTGCTGAGAA-GGGGTACTGGG----TGACCTGGCATGAAAGGTCACCCTGCA-CCCCGCA-CCAGGTAGGGCGGGCGCAGGATCCCGGTTGCCACAGGCATCGGAGCGGCCGGGAGTGGGGGCAGGGGGAGGCAATGAGAACTCCCGAGGAGGCGGCTCGCAGGGGCTGCATCGGGCGCCTGGGCCGGCGGGGCGGAGGGAGGCGCCCTGCTCTCCGGTC-----------------------CTTCCCTTC---------------------------------------------CCGACTCGTTCCAGGGGCGGCAGCGCCACCTGCTGGAGTGTGCGCGTCTGCGCACCGGGCCGGGTTCCGCAGGTCCTGGGGCTGCGCCCGAGACCCCCGACGGGGTTTCCGGCGCCTCCACCGCTTCCCCGGCGTCTTGGGCTGCGAGGGGCCCTT-TCCGCAGGGCGACGTTTTAGCAGTTCTGGAAGGAAGGGCCCGCTGCCGTTTACCTCTGAGGACCAAGGCCGAGAGCCTGGAGGGCGTGGAGAAGGGTCTGACCGCCGGCTCTGGTCCTCGGGCTCTTGGCGACAGCGACCTCCTTCCTCCTCCAGGCGATGGTGACGGGCGCTCTC----AGAGTGGCTTCCACACTAGGCGCAGGGCTGTCTTCCAAGTGTGTGGTCCTCTCAGAcct i ponAbe2.chr17 I 500 C 0 s rheMac3.chr16 74822249 663 + 80904711 GGGAGCCGCGTGTGCTGAGAAGCGGGTACTGGG--GTTGGCCCGGCGCGAAAGGTCACCCTGCGCGCCCGCACCCAGGTGAGGGGGACGCAGGAACCCGGTTGGCACAGGCATCGGAGCGGCCGGGAGTTGAGGCAGGGGGAGGCAATGGGAACTCCCGGGGAGG-GGCTCGCAGGGACCGCACCCGGCGCCTGGGCGGGCGGGGCGGAGGGGAGCGTCCCGCTTTCCTGTC-----------------------CTTCCCTTCC-----------CCGCCCTCCCGCCCCGAGCACCGCCTGCGGGACACGCCTCGTTCCAGGGGCGGCAGCGCCACCTGCTGGAGTGTGTGCGTCTGTGCACCGGGCTGGGCTCCGAAGGTCGTGGGACTGCGCCCGAGACCCCAGACCCGGTCTCCGGAGCCTCCACCGCTTCCCCGGCGTTTGGGGCGGCAAGGGGCCCTT-TCCGCAGGGCGACGTTTTAGCAGTTCTGGAAGGAAGGGCCCACTGCCGTTGCCCTCTCAGGACTGAGGCCGGGAACCCGGAGGGCGTGGGGAAGGGTCTGACCGCCGGTTCTGGTCCTCGGGCTCTTGGCGACAGCGACTTCCCTCCTCCTCCAGGCGATGGTGACGGGCGCTCTC----AGAGTGGCTGCCACAGTAGACGCAGGGCTGTCTTCCAAGTATGCGGTCCTCTCAGAcct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74630905 686 + 80997621 GGGAGCCGGGTGTGCTGAGAAGCGGGTACTGGG--GTTGGCCCGGCGCGAAAGGTCACCCTGCGCGCCCGCACCCAGGTGAGGGGGACGCAGGACCCCGGTTGGCACAGGCATCGGAGCGGCCGGGAGTTGAGGCAGGGGGAGGCAATGAGAACTCCCGGGGAGG-GGCTCGCAGGGACCGCACCCGGCGCCTGGGCCGGCGGGGCGGAGGGAAGCGTCCCGctttcctgtccttcccttcccagccctcccgtgcttcccttcc-----------ccgccctcccGCCCCGAGCACCGCCTGCGGGACACGCCTCGTTCCAGGGGCGGCAGCGCCACCTGCTGGAGTGTGTGCGTCTGTGCACCGGGCTGGGCTCCGAAGGTCGTGGGACTGCGCCCGAGACCCCAGACCCGGTCTCCGGAGCCTCCACCGCTTCCCCGGCGCTTGGGGCGGCAAGGGGCCCTT-TCCGCAGGGCGACGTTTTAGCAGTTCTGGAAGGAAGGGCCCACTGCCGTTGCCCTCTGAGGACTGAGGCCGGGAACCCGGAGGGCGTGGAGAAGGGTCTGACCGCCGGTTCTGGTCCTCGGGCTCTTGGCGACAGTGACTTCCCTCCTCCTCCGGGCGATGGTGACGGGCGCTCTC----AGAGTGGCTGCCACAGTAGACGCAGGGCTGTCTTCCAAGTATGCGGTCCTCTCAGAcct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68638616 686 + 74645514 GGGAGCCGGGTGTGCTGAGAAGCGGGTACTGGG--GTTGGCCCGGCGCGAAAGGTCACCCTGCGCCCCCGCACCCAGATGAGGGGGACGCAGGACCCCGGTTGGCACAGGCATCGGAGCGGCCGGGAGTTGGGGCAGGGGGAGGCAATGAGAACTCCCGCGGAGG-GGCTCGCAGGGACCGCACCGGACGCCTGGGCCGGCGGGGCGGAGGGAGGcgccccgctctccggtccttcccttccccgccctcccgtccttcccttcc-----------ccgccctcccgccccgAGCACCGCCTGCGGGACACGCCTCGTTCCAGGGGCGGCAGCGCCACCTGCTGGAGCGTGTGCGTCTGTGCACCGGGCTGGGCTCCGAAGGTCGTGGGTCTGCGCCCGAGACCCCGGACCCGGTCTCCGGAGCCTCCACCGCTTCCCCTGCGCTTGGGGCGGCAAGGGGCGCTT-TCCGCAGGGCGACGTTTTAGCAGTTCTGGAAGGAAGGGCCCACTGCCGTTGCCCTCTGAGGACTGAGGCCGGGAACCTGGAGGGCGTGGAGAAGGGTCTGACCGCCGGTTCTGGTCCTCGGGCTCTTGGCGACAGCGACTTCCCTCCTCCTCCGGGCGATGGTGACGGGCGCTCTC----AGAGTGGCTGCCACAGTAGACGCAGGGCTGTCTTCCAAGTATGCGGTCCTCTCAGACCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30692070 663 - 75148670 GGGAGCCGGGTGTGCTGAGAAGCGGGTACTGGG--GTAGGCCCGGCGCGAAAGGTCACCCTGCGCCCCCGCACCCAGGTGAGGGGGACGCAGGACCCCGGTTGGCACAGGCATCGGAGCGGCCGGGAGTTGGGGCAGGGGGAGGCAATGAAAACTCCCGGGCAGG-GGCTCGCAGAGACCGCACCGGGCGCCTGGGCCAGCGGGGCGGAGGGAGGTGCCCCGCTCTCCTGTC-----------------------CTTCCCTTCC-----------CCGCCCTCCCGCCCCGCGCACCGCCTGCGGGACACGCCTCGTTCCAGGGGCGGCAGCGCCACCTGCTGGAGTGTGTGCGTCTGTGCACCGGGCTGGGTTCCGAAGGTCCTGGGACTGCGCCCGAGACCCCGGACCCGGTCTCCGGAGCCTCTACCGCTTCCCCAGCGCTTGGGGCGGCAAGGGGCCCTT-TCCGCAGGGCGACGTTTTAGCAGTTCTGGAAGGAAGGGCCCACTGCCGTTGCCCTCTGAGGACTGAGGCCGGGAACCTGGAGGGCGTGGAGAAGGGTCTGACCACCGGTTCTGGTCCTCGGGCTCTTGGCGACAGCGACTTCCCTCCTCCTCCGGGCGATGGTGACGGGCGCTCTC----AGAGTGGCTGCCACAGTAGACGCAGTGCTGTCTTCCAAGTATGCGGTCCTCTCAgacct i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126519587 669 + 159171411 GGGACCCGGGTGTGCTGAGAAGGGGGTACTGGGGGGCTGGCCCGGCATGAAAGGTCAC--------CCCGCACGCAGGTGAGGTGGGTGCAGGACCCCGGCTGCCACAGGCATCGGAGCGGCCAGGAGTGGGAGCAGGGGCCGGCAATGAGATCTCCCTGGGTGGGTGCTCGCAGGGACCGCATcgggcgccggggccggcggggcggAGGGAGGCGCCCTGCTCTCCCGTC-----------------------CCTCCCTTCCCGCTCTCGCGACCCCCTCCCCTCGGCGAGCGCCGCCTGCGGGACCTGCTTCGTTCCAGGGGCGACAGCGCCACCTTCTGGAGCACGTGCGTCTGTGCAGCGGGCCGGGTTCCGCAGGTCCTGGGGCTGCGCCCGAGACCCCCGACCCGGTCTCCGGTGCCTCCACCGCTTCCCCGGCGCCT-GGGCTGCAAGGGGCGCTTGTCCGCAGGGCGACCTTGCAGCAGTCCTGGAAGGAGGGGCCCCCTTCCG-TGGCCTCTGAGGACCGAGGTCGGGAACCTGGCGGGTGTGGAGAAGGGTCTGGCAGTCAGCGCCGGTCCTTGGGCTCTCGGCGACAGCGACCTCCCTCCTCCCC---GCGATGGTGACCAGCGCTCTCGGAAGGAGTGGCTGCCACACCAGGCGCAGGGCTGTCTTCCAAGcatgtggtcctctcagacct i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3654370 933 - 94967081 M e canFam3.chr9 57407835 2004 - 61074082 I a score=32885.000000 s hg38.chr17_GL383566v1_alt 38453 11 + 90219 atggagttggt s panTro4.chr17 76229315 11 + 82630442 acggagttggt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67329527 11 + 73212453 atggagttggt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3655303 11 - 94967081 atagagttggt i nomLeu3.chr14 M 933 C 0 s rheMac3.chr16 74822912 11 + 80904711 atggagttggt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74631591 11 + 80997621 atggagttggt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68639302 11 + 74645514 GTGGAGTTAGT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30692733 11 - 75148670 atggagttggt i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126520256 11 + 159171411 acggagttggt i calJac3.chr5 C 0 C 0 e canFam3.chr9 57407835 2004 - 61074082 I a score=1709634.000000 s hg38.chr17_GL383566v1_alt 38464 559 + 90219 gctgttctggctccctcttaaagagcgggaaactgagacacagagaagtcccaccgccgggggtcggggtggggagggcctgggattggaacccaggcatgctggcttgtgtcacctgtggttctctctgcctgaagattttttcacctgcctaactcatgagctgctacttaccctttgggtagcattagatgtcgcctcctccaggaagccctccct-ccccctccatgtgagggtgggcgctcctgctatatgtgggcctaccggcc----ctctgcgggctggatcatcacagtctgttcacttgtct------gcctcctaccccttgacgtgggctcccaa--ggatcatttgtgtctgtcttgttcaccTGCCCTTTGTAGTGAACCAAACCTTTAAGTGCACATTTTAAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGG-------AAGAGCCAGGTCAGAGAGT-CATC-AGAAGCCCATATTTTACAGGATGTGGCTGGGGGCCCCTCTGGGG-TGCCCCTCCAAGGAAGATGCTGAGCTGGACCTGGAGCACCGTGGAGGCAGGACC s panTro4.chr17 76229326 560 + 82630442 gctgttctggctccctcttaaagagggggaaactgaggcacagagaagtcccaccaccgggggtcggggtggggagggcctgggattggaacccaggcatgctggcttccgtcacctgtggttctctctgcctgaagattttttcacctgcctaactcatgagctgctacttaccctttgggtagcattagatgtcgcctcctccaggaagccctccct-ccccctccacgtgagggtgggcgctcctgctgtatgtgggcctaccggcc----ctctgcgggctggatcatcacagtctgttcacttgtct------gccttctcccccttgacatgggctcccaa--ggatcatttgtgtctgtcttgttcaccTGCCCTTTGTAGTGAACCAAACCTTTAATTGCACATTTAAAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGG-------AGGAGCCAGGTCAGAGGGT-CATC-AGAAGCCCATATTTTACAGGATGTGGCTGGGGGCCCCTCTGGGGGTGCCCCTCCAAGGAAGATGCTGAGCTGGACCTGGAGCACCGTGGAGGCAGGACC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67329538 556 + 73212453 gctgttctggctccctctttaagagggggaaac--aggcacagagaagtcccaccgccgggggacggggtggtgggggcctggaattggaacccaggtatgttggcttccgtcacctgtggttctctctgcctgaagattttttcacctgcctaactcatgagctgctacttaccctttgggtggcattagatgtcgcctcctccaggaagccctctct-ccccctccatgtgagggtgggcgctcctgctgtatgcgggcctaccggcc----ctccgtgggctggatcatcacaatctgttcacttgtct------gctttctcccccttgtcgcgggctcccaa--ggatcatttgtgtttgtcttgttcaccTGCCCTTTGTAGTGAACCAAACCTTTAATTGCACATTTTAAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGG-------AGGAGCCAGGTCAGAGGGT-TATC---AAGCCCATATTTTACAGGATGTGGCTGGGGGCCCCTCTGGGGTTGTCCCTCCAAAGAAGATGCTGAGCTGGACCTGGAGCACCGTGGAGGCAGGACC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3655314 567 - 94967081 gctcttctggcttcctcttaaagagggggaaactgaggcacagagcagtcccaccgccgggggtcggggtggggagggcctgggattggaacccaggcatgttggcttccgtcacctgtggttctctctgcctgaagattttttcacctgcctaactcatgagctgctacttaccctttgggtggcattagatgtcgcctcctccaggaagccctccct-ccccctccacgtgagggtgggcgctcctgctgtatgcgggcctaccggcc----ctctgcgggctggatcatcacagtctgttcacttgtct------gccttctccctcttgtcgtgggctcccaa--ggatcgtttgtgtctgtcttgttcaccTGTCCTTCGTAGTGAACCAAACCTTTAATTGCACATTTTAAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGGAGCTCTCAGGAGCCAGGTCAGAGGGT-CATC-AGAAGCCCATATTTTACAGGATGTGGCTGGGGGCCCCTCTGGGGGTGTGCCTCCAAGGAAGATGCTGAGCTGGACCTGGAGCACCGTGGAGGCAGGACC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74822923 545 + 80904711 gctgttctggctccctcttaaagagggggaaactgaggcacagagcagtcccaccgccgggggtcggggtggaaagggcctgggattggaacctaagcgtgttggctccCGTcacctgtggttctctctgcctgaagattctttcaccagcctaactcatgagctgctgcttactctttgggtggcattggatgttgccttctccaggaagccctccct-ccccctccac--gagggtgggcgctcctgctgcgtgcgggcctacccgcc----ctctgcaggctggatcattacagtctgtttacttgtcc------gccttctaccccttgtcctgggctcccaa--ggatcatttgtgtctgtcttgttcaccTGCCCTTTGTAGTGAACCAAACCTTTAATTGCACAA-TATAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGG-------AAGAGCCAGGTCAGAGGGT-CATC------------TTTTACTGGATGTGGCTGGGGG-CCCTCTGGGGGTGTCCCTCCAAGGAAGATGCTGAGCTAGGCGTGGAGCACCGTGGAGGCAGGACC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74631602 545 + 80997621 gctgttctggctccctcttaaagagggggaaactgaggcacagagcagtcccaccgccgggggtcggggtggaaagggcctgggattggaacctaagcgtgttggctccCGTcacctgtggttctctctgcctgaagattctttcaccagcctaactcatgagctgctgcttactctttgggtggcattggatgttgccttctccaggaagccctccct-ccccctccac--gagggtgggcgctcctgctgcgtgcgggcctacccgcc----ctctgcaggctggatcattacagtttgtttacttgtcc------gccttctaccccttgtcctgggctcccaa--ggatcatttgtgtctgtcttgttcaccTGCCCTTTGTAGTGACCCAAACCTTTAATTGCACAA-TATAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGG-------AAGAGCCAGGTCAGAGGGT-CATC------------TTTTACTGGATGTGGCTGGGGG-CCCTCTGGGGGTGTCCCTCCAAGGAAGATGCTGAGCTAGGCCTGGAGCACCGTGGAGGCAGGACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68639313 546 + 74645514 GCTGTTCTGGCTCCCTCTTaaagagggggaaactgaggcacagagcagtcCCACCACCGGGGGTCGGGGTGGAAAGGGCCTGGGATTGGAACCTAAGCGTGTTGGCTCCCGTCACCTGTGGTTCTCTCTGCCCGACGATTCTTTCACCAGCCTAACTCATGAGCTGCTACTTACCCTTTGGGTGGCATTGGATGTtgccttctccaggaagccctccct-ccccctccac--aAGGGTGGGCGCTGCTGCTGTGTGCGGGCCTACCCGCC----CTCTGCAGGCTGGATCATTACAGTCTGTTTACTTGTCC------GCCTTCTACCCCTTGTCGTGGGCTCCCAA--GGATCATttgtgtctgtcttgttcacctaCTCTTTGTAGTGAACCAAACCTTTAATTGCACAATTTTAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGG-------AGGAGCCAGGTCAGTGGGT-CATC------------TTTTACTGGATGTGGCTGGGGG-CCCTCTGGGGGTGTCCCTCCAAAGAAGATGCTGAGCTAGGCCTGGAGCACCGTGGAGGCAGGACC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30692744 546 - 75148670 gctgttctggctccctcttaaagagggggaaactgaggcacagagcagtcccaccaccgggggtcggggtggaaagggcctgggattggaacctaagcgtgttggctcccgtcacctatggttctctctgcctgaagattctttcaccagcctaactcatgagctgctacttaccctttgggtggcattggatgttgccttctccaggaagccctccct-ccccctccac--gagggcgggcgctgctgctgtgtgcgggcctacccgcc----ctctgcaggctggatcattacagtctgttcacttgtcc------gccttctaccccttgtcgtgggctcccaa--ggatcatctgtgtctgtcttgttcaccTGCCCTTTGTAGTGAACCAAACCTTTAATTGCACAATTTTAAATTGATTTCCAAGGGGGCTGAGAGCTATGGAGG-------AGGAGCCAGGTCAGAGGGT-CATC------------TTTTACTGGATGTGGCTGGGGG-CCCTCTGGGGGTGTCCCTCCAAGGAAGATGCTGAGCTAGGCCTGGAGCACAGTGGAGGCAGGACC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126520267 551 + 159171411 gctg-tctcgctccctcttaaagagtaggaaactgaggcacagagaagtcccaccactgggggtcgggctgggaagggcctggggttggaacccaggcggattggctccCATTATCAGTGgttctctctgcctgaagattctttcaccttccacactcatgagttgctgcttactctttgggtggcattagatgtcagctcctccaggaagccctccct-ccccctccacatgacggtgggtggtcctgctgt-------cttgctggcc----ctttgcaggctggatcatcacagtctgttcacttgtcc------accttctcccccttgtccaggactcccaa--ggatcatttgtgtctgtcttgtttaccTGCCCTTTGTAGTGAGCGAAACCTTTAATTGCACAATTTTAAATTGATTTTCA--GGGGCTGAGAGCTACAGAGG-------AGGAGCCAGGTCAGAGGGTGCATC-AGATGCCCATCTTTTACTGGATGTGGCTGGGTGCCCATCTGGGCATGTCCCTCCAGGGAAGAAGCTGAGCTGGGCCTGGAGCACCGTGGAGACCGGACC i calJac3.chr5 C 0 C 0 s canFam3.chr9 57409839 467 - 61074082 gctgttccttctccagctcaaagatggg--aactgaggcccggagaggt----------ggagccagtaggtggagggcctgggattcaggcccaggctggttggctccggtcac-----------------------------------------------------------------------------------ctcccccaggaagccttccgtgacccctccacattagggtggctgctcccgctctgtgctcagctggcagcctgtattccccattttagttctcaccaggttgcttacctggcccaggtttacctcccccacccactgtgaactcccaaaggagtcacttg----cgtcttgttcacctGCCCTCTGTAGTGACCCAAACCTTTAACCGCATATTTTTAATTTAATT----ATGAGGGTCAGAGGCGCTGA---------AGGAGCAAGGTCAGAGGGT-GTCCCAGAAGCCCATCTCTTGCTGCGTTTGCTTGGAC--TCCCCCAGAAGTGCTCCTCTCAGGAAGATGCTGGGCTGGGCTCTGAGCAGCGTGGGGGCAGGACC i canFam3.chr9 I 2004 I 3198 a score=3434519.000000 s hg38.chr17_GL383566v1_alt 39023 1211 + 90219 ATGTCTGCCATGCTCAGAGATGGGTGCCAGGGGCGCTGGCTTGTcactcaagactccccactccatctgccctcccccactctcccactAACCAGGGGGGACCCACCTGCACCTCTGGTCACCACTCATGCTCCCTGGTGCTGGGCACCCCAGGGACAGGAAGAGGGCTGGGTGTTCCTGGCTCCTGCACTGCTTCCCAGGCCTGATCCCCATCTTTCTGCACCTGCCTCCCACCCATCAGCTTCCGCTAGACTGGAAGCCTCCAGAGGGCAGGTGCTGCCCCTCTTTCCCTTGTGCCTGGATTCCGTTGGCATCTAATCACAGACGAGGGACTGTGTCCCCTTCTCCACCTCCGTGGAAACTGTGTCTCACTCTCTATTCCAGGCCGAGC-TGTCCATCCTCTGCTGGAAGCCTTGTGCCATCAGCCCTCACCTCCCCCTTCAAGCCTAGACATTCTCTCTCCTGGCGTAAATATGTTAACTCAAGGTTCTTTGCTCTAAAACCAAGGAGTTGTCTCCTCTCCCAGGTCCACCTCCTCTCTCTCGTGAACTCCCTGCCCCTCCACCTCATCCCTCCTCCATGACCTCCCCCTACTCACCATCTGCCCCTTCTGCCAACCCAGCGAGCTGCAGCTCTCCCTGGCATGTCACTCTCTAAACCTTCTGTCCCTTGGTTACGAGTGCAGTTCTCGCCTGGATTTCTTCCCGGCTCTTTGACTTCTCCCCAACCCTTCTTTTTCTGTTTTCCCCTTAAATGTGGACATCCCCACGTCCAGGACCTGGTCTCTGGCCCTTCTCCTCTGATTCATCTCAGTGGCGTTTCTCCCAAATCCCCGATTGCAGCCACAGCCACATGTCAATTAGGTCACCTCCATGTCCCGGCTAAGACGTGCCTCCTGGCCCCTGATGCGCCATCTCCCAGATGGAAATGCCATCATTGTATTTTTGCTCTGTCCCCACCAAAGGCAACACAAAGCATCTCCATCTGTTCCTTCATGTTCCCTACTCAGTGAATGACCGCTTATTTACCCACTGGCCCAGGCTCAGCTTGGATGT-CCCCGGGCCGTCGTTTCCAGATCTCATCTTCAAATCCTGGCGATCTTCGCCCAGGAGCTGTGGACTCCTCTTCTCTGCCTGCCGCCCCTGCCCTGTCCAGCGTCCACCTCTCCCAAATGGCCCACTGGGTCCCTCCCTCCTGGCCCCCCTGCATCT s panTro4.chr17 76229886 1206 + 82630442 ATGTCTGCCATGCTCAGAGATGGGTGCCAGGGGCGCTGGCTTGTCACTCAAGACTCCCCACTCCATCTGCCCTCCCCCACTCTCCCACTAAGCAGGGGGGACCCACCTGCACCTCTGGTCACCACTCATGCTCCCTGGTGCTGGGCACCCCAGGGACAGGAAGATGGCTGGGTGTTCCTGGCTCCTGCACTGCTTCCCAGGCCTGATCCCCATCTTTCTGCACCTGCCTCCCACCCATCAGCTTCCGCTAGACTGGAAGCCTCCAGAGGGCAGGTGCCGCCCCTCTTTCCCTTGTGCCTGGATTCCATTGGCATCTAATCACAGACGAGGGACTGTGTCCCCTTCTCCACCTCCGTGGAAACTGTGTCCCACTCTCTATTCCAGGCCGAGC-TGTCCGTCCTCTGCTGGAAGCCTTGTGCCGTCAGCCCTCACCTCCCCCTTCAAGCCTAGACATTCTCTCTCCTGGCATAAATACGTTAACTCAAGGCTCTTTGATCTAAAACCAAGGAGTTGTCTCCTCTCCCAGGTCCACCTCCTCTCTCTCGTGAACTCCCTGCTCCTCCACCTCATCCCTCCTCCATGACCTCCCCCTACTCACCATCTGCCCCTTCTGCCAACCCAGTGAGCTGCAGCTCTCCCTGGCATGTCACTCTCTAAACCTTCTGTCCCTTGGTTACGAGTGCAGTTCTTGCCTGGATTTCTTCCCGGCTCTTTGACTTCTCCCCCACCCTTCTTTTTCTGTTTTCCCCTTAAATGTGGACATCCCCACGTCCAGGACCTGGTCTCTGGCCCTTCTCCTCTGAATCATCTCAGTGGCGTTTCTCCCAAATCCCCGACTGCAGCCACAGCCACATGTCAATTAGGTCACCTCCATGTCCTGGCTAAGACGTGCCTCCTGGCCCCTGATGCGCCATCTCCCAGATGGAAATGCCATCATTGTATTTTTGCTCTGTCCCCACCAAAGGCAACACAAAGCATCTCCATCTGTTCCTTCATGTCCCCTACTCAGTGAATGACCGCTTATTTACCCACTGGCCCAGGCTCAGCTTGGATGC-CCCCGGGCCGTCGTGTCCAGATCTCATCTTCAAATCCTGGCGATCTTGCCCCAGGAGCTGTGGA-----CTTCTCTGCCTGCCGCCCCTGCCCTGTCCAGCGTCCACCTCTGCCAAATGGCCCACTGAGTCCCTCCCTCCTGGCCCCCCTGCATCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67330094 1205 + 73212453 ATGTCTGCCATGCTCAGAGATGGGTGCCAGGGGTGCTGGCTTGTCACTCAAGACTCTCCACTCCATCTGCCCTCCCCCACTCTCCCACTAACCAGGGGGGACCCACCTGCACCTCTGGTCACCACTCATGCTCCCTGGTGCTGGGCACCCCAGGGACAGGAAGAAGGCTGGGTGTTCCTGGCTCCTGCACTGCTTCCCAGGCCTGATCCCCGTCTTTCTGCACCTGCCTCCCACCCATCAGCCTCCACTAGACTGGAAGCCTCCAGAGGGCAGGTGCTG-CCCTCTTTCCCCTGTGCCCGGATTCCACTGGCATCTAATCACAGATGAGGGACTGTGTCCCCTTCTCCACCTCTGTGGAAACTGTGTCCCACCCTCTATTCCAGGCCGAGC-TGTCCATGCTCTGCTGGAAGCCTTGTGTTGTCAGCCCTCACCTCCCCCTTCAAGCCTAGACATTCTGTCTCCTGGCATAAATATGTT--CTCAAGGCTCTTTGCTCTAAAACCAAGGAGTTGTCTCCTCTCCCAGGTCCACCTCCTCTCGCTCGTGAACTCCCTGCCCCTCCACCTCATCCGTCCTCCACGACCTCCCCCTACTCACCATCTGCCCCTTCTGCCGACCCAGCGAGCTGCAGCTCTCCCTGGCATGTCACTCTCTAAACCTTCTGTCCCTTGGTTACGAGTGCAGTTCTCGCCTGGATTTCTTCCCGGCTCTTTGACTTCTCCCCAACCCTTCTTTTTCTGTTTTCCCCTTAAAGGTGGACATCCCCACGTCCAGGACCTGGTCTCCGGCCCTT---CTCTGAATCATCTCAGTGGCGTTTCTCCCAAATCCCCAACTGCAGCCACAGCCACATGTCAATTAGGTCCCCTCCATGTCCCGGCTAAGACGTGCCTCCTGGCCCCTGATGCGCCATCTCCCAGATGGAAGTGCCATCATTGTATTTTTGCTCTGTCCCCACCAAAGGCAACACAAAGCATCTCCatctgttccttcatgtcccctactcagtgaatgaccccttatttacccactggcccagtctcagcttggatgt-ccccgggccctcttgtccagatctcatcttcaaatcctgctgatcttcccccaggagctgtggacccctcttctccgcctgccgcccctgccctgtccagtgtccacctctcccaaatggcccatggagtccctctctcctggcccccctgcatct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3655881 1186 - 94967081 ATGTCTGCCATGCTCAGAGATGGGTGCCAGGGGCGCTGGCTTGTCACTCAAGACTCCCCACTCTATCTGCCCTCCCCCACTCTCCCACTAACCAGAGGGGACCCACCTGCACCTCTGGTCACCACTCATGCTCCCTGGTGCTGGGCACCCCAGGGACAGGAAGAGGGCTGGGTGTTCCTGGCTCCTGCACTGCTTCCCAGTCCTGATCCCCATCTTTCTGCACCTGCCTCCCACCCATCAGCCTCCACTAGACTGGAAGCCTCCAGAGGGCAGGTGCTGCCCCTCTTTCCCCTGTGCCCGGATTCCACTGGCATCTAATCACAGACGAGGGACTGTGTCCCCTTCTCCACCTCTGTGGAAACTGTGTCCCACTCTCTATTCCAGGCCGAGCTTGTCCATCCTGTACTGGAAAC--TGTGCCGTCAGCCCTCACCTCCCCCTTCAAGCCTAGACATTCTCTCTCCTGGCATAAATATGTT--CTCAAGGCTCTTCGCTCTAAAACCAAGGGGTTGTCTCCTCTCCCAGGTCCACCTCCTCTCTCTCGTGAACTCCCTGTGCTTCCACCTCATCCCTCCCCCATGACCTCCCCCTACTCACCATCTGCCCCTTCTGCCAACCCAACGAGCTGCAGCTCTCCCTGGCACGTCACTCTCTAAACCTTCTGTCCCTTGGTTACGAGTGCGGTTCTCGCTTGGATTTCTTCCCGGCTCTTTGACTTCTCCCCAACCCTTCTTTTTCTGTTTTCCCCTTAAATATGGACATCCCCACGTCCAGGACCTGGTCTCCGGCCCTCCTCCTCTGAATCATCTCGGTGGCGTTTCTCCCAAATCCCCGACTGCAGCCACAGCCACATGTCAATTAGGTCACCTCCATGTCCCGGCTAAGATGTGCCTCCTGGCCCCTGATGCGCCATCTCCCAGATGGAAGTGCCATCATTGTATTTTTGCTCTGTCCCCACCAAAGGCAACACAAAGCATCTCCATCTGTTCCTTCATGTCCCCTCCTCAGTGAATGACCCTTTATTTACCCACTGGCCCAGGCTCAACTTGGATGT-CCCCAGGCCCTCATGTCCAGATCTCATCTTCAAATCCTGGTGATCTTCCCCCAGGAGCTGTGGACCCCTCTTCTCTGCCTGCTGCCc----------------------ctcccaaatggcccaccgggtccctccctcctggcccccctccatct i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74823468 1183 + 80904711 ATGTCTGCCATACTCAGAGATGGGTGCC-GGGGCGCTGGCTTGTCACTCAAGACTCCCCACTCCATCTGCCCTCCCCCACTCTCCCATTAACCAGGGGGGACCCACCTGCCCCTCTGGTCGCCACTCATGCTCCCAGGTGCTGGGCACCCCAGGGACGGGAAGAATGCTGGGTGTTCCTAGCTCCCGCACTGCTTCCCAGGCCTGATCCCCATCTTTCTGCACCTGCCTCCCACTCAGGAGCCTCTGCTAGACTGGAAGCCTCCAGAGGGCAGGTGCTG--CCCCTTTCCCCTGTGCCTGGATTCCACTGACATCCAATCACAGACGAGGGACTGTGTCCCCTCCTCCACCTCCGTGGAAGCTGTGTCCTCCTCTCTATTCCAGGCCGAGC-TGTCTGTCCTCTGCTGGAAGCCTTGTGCCATCACCCCTCACCTCCCACTTCAAGCCTAGACGTTCTCTCTCCTAGCATAAATATGTT--GTCAAGGCGCTTTGCTCTAAAAGCAAGGAGTTGTCTCCTCTCCCAGATCTACCTCCTCTCTCTCGTGAACTCCCTGCCCCTCCACCCCATCCCTCCTCCATGACCTCCCCCTACTCACCATCTGCCCCTTCTGCTAACCCAGCGATCTGCGGGTCTCCCTGGCATGTCACTCTCTAAACCTTCTGTCCCTTGGCTACTAGTGCAGTTCTCGCCTGGATTTCTTCCCGGCTCTTTGACTTCCCCCCAGCTCTTCTTTTTCTGTTTTCCCCTTAAAGGTGGACATCCCCAGGTCCAGGACCTGATCTCCGGCCCTTCTCCTCTGAATCATCTCAGTGGCGTTTCTCCCAGATCCCCAACTGCAGCCACAGTCACATGTCAATTAGGTCACCTCCATGTCCCAACTAAGATGTGCCTCCTGGCCCCTGATGTGCCATCTCCCAGATGGAAGTGCCATCATTGTATTTCTGCTCTGTCCCCACCAAAGGCAACACAAAGCGTCTCCATCTGTCCTGTCATGTCCCCTACTCAGTGAATGACCCCTTATTTACCCACTGGCCCAGGCTCAGCTTGGATGT-CCCCGGGCCCTCATGTCCAGATCTCATCTTCAAATCCTGGCAATCTTCTCCCAGGAGCCGTGGACCCCTCTTCTCTGCCCACCGCCCCTGCCCTGTCCAGCATCCACCTCTCCCAAATGGC-----------------------CCCCCTGCATCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74632147 1183 + 80997621 ATGTCTGCCATACTCAGAGATGGGTGCC-GGGGCGCTGGCTTGTcactcaagactccccactccatctgccctcccccactctcccaTTAACCAGGGGGGACCCACCTGCCCCTCTGGTCGCCACTCATGCTCCCAGGTGCTGGGCACCCCAGGGACGGGAAGAATGCTGGGTGTTCCTAGCTCCCGCACTGCTTCCCAGGCCTGATCCCCATCTTTCTGCACCTGCCTCCCACTCAGGAGCCTCTGCTAGACTGGAAGCCTCCAGAGGGCAGGTGCTG--CCCCTTTCCCCTGTGCCTGGATTCCACTGACATCCAATCACAGACGAGGGACTGTGTCCCCTCCTCCACCTCCGTGGAAGCTGCGTCCCCCTCTCTATTCCAGGCCGAGC-TGTCTGTCCTCTGCTGGAAGCCTTGTGCCATCACCCCTCACCTCCCACTTCAAGCCTAGACGTTCTCTCTCCTAGCATAAATATGTT--GTCAAGGCGCTTTGCTCTAAAAGCAAGGAGTTGTCTCCTCTCCCAGATCTACCTCCTCTCTCTCGTGAACTCCCTGCCCCTCCACCCCATCCCTCCTCCATGACCTCCCCCTACTCACCATCTGCCCCTTCTGCTAACCCAGCGATCTGCGGGTCTCCCTGGCATGTCACTCTCTAAACCTTCTGTCCCTTGGCTACTAGTGCAGTTCTCGCCTGGATTTCTTCCCGGCTCTTTGACTTCCCCCCAGCTCTTCTTTTTCTGTTTTCCCCTTAAAGGTGGACATCCCCAGGTCCAGGACCTGATCTCCGGCCCTTCTCCTCTGAATCATCTCAGTGGCGTTTCTCCCAGATCCCCAACTGCAGCCACAGTCACATGTCAATTAGGTCACCTCCATGTCCCAACTAAGATGTGCCTCCTGGCCCCTGATGTGCCATCTCCCAGATGGAAGTGCCATCATTGTATTTCTGCTCTGTCCCCACCAAAGGCAACACAAAGCGTCTCCATCTGTCCTGTCATGTCCCCTACTCAGTGAATGACCCCTTATTTACCCACTGGCCCAGGTTCAGCTTGGATGT-CCCCGGGCCCTCATGTCCAGATCTCATCTTCAAATCCTGGCAATCTTCTCCCAGGAGCCGTGGACCCCTCTTCTCTGCCCACCGCCCCTGCCCTGTCCAGCATCCACCTCTCCCAAATGGC-----------------------TCCCCTGCATCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68639859 1182 + 74645514 ATGTCTGCCATACTCAGAGACGGGTGCC-GGGGCACTGGCTTGTCACTCAAGACTCCCCACTCCATCGGCCCTCCCCCACTCTCCCATTAACCAGGGGGGACCCATCTGCCCCTCTGGTCGCCACTCATGCTCCCAGGTGCTGGGCACCCCAGGGACGGGAAGAATGCT-GGTGTTCCTGGCTCCCGCACTGCTTCCCAGGCCTGATCCCCATCTTTCTGCACCTGCCTCCCACTCAGGAGCCTCTGCTAGACTGGAAGCCTCCAGAGGGCAGGTGCTG--CCCCTTTCCCCTGTGCCTGGATTCCACTGGCATCTAATCACAGACGAGGGACTGTGTCCCCTCCTCCACCTCCGTGGAAGCTGCGTCCCCCTCTCTATTCCAGGCCAAGC-TGTCCGTCCTCTGCTGGAAGCCTTGTGCCATCACCCCTCACCTCCCACTTCAAGCCTAGACGTTCTCTCTCCTGGCATAAATATGTT--GTCAAGGCTCTTTGCTCTAAAAGCAAGGAGTTGtctcctctcccagatctacctcctctctctggtgaactccctgcccctccaccccatccctcctccatgacctcctcctactcaccatctgcccctTCTGCTAACCCAGCGATCTGCAGGTCTCCCTGGCATGTCACTCTCTAAACCTTCTGTCCCTTGGCTACTAGTGCGGTTCTCGCCTGGATTTCTTCCCGGCTCTTTGACTTCCCCCcaactcttctttttctgttttccccttAAAGGTGGACATCCCCAGGTCCAGAACCTGATCTCCAGCCCTTCTCCTCTGAATCATCTCAGTGGCGTTTCTCCCAGATCCCCAACTGCAGCCACAGTCACATGTCAATTAGGTCACCTCCATGTCCCAGCTAAGATGTGCCTCCTGGCCCCTGATGTGCCATCTCCCAGATGGAAGTGCCATCATTGTATTTCTGCTCTGTCCCCACCAAAGGCAACACAAAGCGTCTCCATCTGTCCCGTCATGTCCCCTACTCAGTGAATGACCCCTTATTTACCCACTGGCCCAGGCTCAGCTTGGATGT-CCCCGGGCCCTCATGTCCAGATCTCATCTTCAAATCCTGGCAATCTTCTCCCAGGAGCTGTGGACCCCTCTTCTCTGCCCGCCGCCCCTGCCCTGTCCAGCATCCACCTCTCCCAAATGGC-----------------------CCCCCTGCATCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30693290 1181 - 75148670 ATGTCTGCCATACTCAGAGATGGGTGCC-GGGGCGCTGGCTTGTCACTCAAGACTCCCCACTCCATCTGCCCTCCCCCACTCTCCCATTAACCAGGGGGGA-CCACCTGCCCCTCTGGTCGCCACTCATGCTCCCAGGTGCTGGGCACCCCAGGGATGGGAAGAATGCTGGGTGTTCCTAGCTCCCGCACTACTTCCCAGGCCTGATCCCCATCTTTCTGCACCTGCCTCCCACTCAGGAGCCTCTGCTAGACTGGAAGTCTCCAGAGGGCAGGTGCTG--CCCCTTTCCCCTGTGCCTGGATTCCACTGGCATCTAATCACAGACGAGGGACTGTGTCCCCTTCTCCACCTCCGTGGAAGCTGCGTCGCCCTCTCTATTCCAGGCCGAGC-TGTCCGTCCTCTGCTGGAAGCCTTGTGCGGTCACCCCTCACCTCCCACTTCAAGCCTAGACATTCTCTCTCCTGGCATAAATATGTT--GTCAAGGCTCTTTGCTCTAAAAGCAAGGAGTTGGCTCCTCTCCCAGATCTACCTCCTCTCTCTGGTGAACTCCCTGGCCCTCCACCCCATCCCTCCTCCATGACCTCCCCCTACTCACCATCTGCCCCTTCTGCCAACCCAGCGATCTGCAGGTCTCCCTGGCATGTCACTCTCTAAACCTTCTGTCCCTTGGCTACTAGTGCGGTTCCCGCCTGGATTTCGTCCCGGCTCTTTGACTTCCCCCCAACTCTTCTTTTTCTGTTTTCCCCTTAAAGGGGGACATCCCCAGGCCCAGGACCTGATCTCCGGCCCTTCTCCTCTGAATCATCTCAGTGGCGTTTCTCCCAGATCCCCAACTGCAGCCACAGTCACATGTCAATTAGGTCACCGCCATGTCCCAGCTAAGATGTGCCTCCTGGCCCCTGATGTGCCATCTCCCAGATGGAAGTGCCATCATTGTATTTCTGCTCCGTCCCCACCAAAGGCAACACAAAGCGTCTCCATCTGTCCCGTCATGTCCCCTACTCAGTGAATGACCCCTTATTTACCCACCAGCCCAGGCTCCACTTGGATGT-CCCCGGGCCCTCATGTCCAGATCTCATCTTCAAATCCTGGCAATCTTCTCCCAGGAGCTGTGGACCCCTCTTCTCTGCCCGCCGCCCCTGCCCTGTCCAGCATCCACCTCTCCCAAATGGC------------------------CCCCTGCACCT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126520818 1102 + 159171411 ACATCTGCCATGCTCAGAGATGTGTACCAGGGACACTGGCTTGTTACTCAAGACTCCCCACTCCATCTGCCTTCCCCTACTCTCCCAATAACCAG-GGGGACCCACCTGCA-----GGTCACCACTCATGCTCCCAGGTGCTGGGCA-CCCAGGGATGAGAAGAAGGCTGGGTGTTCCTGGCTCCCACGCTGCTTCCCAGGCCTGATCCTCATCTTTATGCATCTGCCTCCCACCTACCAGCCTTCACTAGACTGGAAGCCTTCAGATAGCAGGCGCTGCACCTCTTTCCCA-GTGCCCAGATTCCATTGGCATTTAATCACAGACGAGGGACTGTGTCCCCTTCTCCACCTCTGTGGAAGCTGTGCCCCGCTTTCTATTCCAGGCCGAGC-TGGC----CTCTCCTGGAAGCCCTGTGCCGTCAGCCCTCACCTCGCCCTTCAAGCCTAGACATTC--TCTTCTGGCATAAATATGTG--CTCAAGGCTCTTTGCACTAAAAGCAAGGAGTTGTCTCCTCTCCCAGGTCCACTTCCTCTCTCTCCCGAACTCCCTGACCCTCCACGCCATCCCTCCTCCATGACCTCCCCCTACTCACCATCTGCCCCTTCTGCCAACCCAGCGAGCGGCAGCTCT-CCTGGCATGTCACTCTCTCAACCTTCTGTCCCGTGATTACCGGTGCAGTTCTGGCCT------------GTTTCTTTGGCTTCT-CCCAGCCCTTCTTTTTCTGCTTTCCCCTTAAAGGTGGACATCCCTGGGTCCAGGACCTGGTCTCTGGCCCTTCTCCTCTGAATCATCTCGGTGGCGTTTCTCCCAAGTCCCTGGCTGCAGCCACAGCCACATGTCAATTATGTCACCTCCATGTCCTGGCTCAGATGTGCCTCCCTGCCCCTGATGCACCAGCTCC------------------------------------------------------------------CTGTTCCTTCACATCCCCTACTCAGCGAATGACCCCTTGTTGACCCACCGGCCCAGGCTTCGCTTGCATGTCCCCCAAGCCCTCGTGTCCAGGTCTCATCTCCGAATCCTGGCGATCTTCCCCCAGGAGGTGTGGGCTCCTCTTCTCTGCC-------------CTGTCCAGCGTCCACCTCTCCCAAACGGCTCACCG-GTCTCTCCCTCCCGATGCCCCTGCATCT i calJac3.chr5 C 0 C 0 e canFam3.chr9 57410306 3198 - 61074082 I a score=1030441.000000 s hg38.chr17_GL383566v1_alt 40234 432 + 90219 AGGAGCAGCCCTCCTCCAACAGTTGGAAGGGTCTTCCCAAAACACAGATGAGACCTTGTCATCTTGAAACTCTTCATTGGCTCTGAATTGTCTTAGGATCAAGCCCAAACTCCTTCAGAGTCTGGGAAGGGGCCCCTCGTTCTGGGtctggctctgtctcccagggtctcccccgccttgcctgctctgtctggccacactgacagtgccctgatgggccatgtcctcttcccctcagcgcctttgcgtgtcccagctttctgagcccagacagccctctccccattttggggggcccacctcacctatcagggtgcagcttctcctctgagaagacttctttgctccccaagcctggatttgatgccatcTGCCTGTATTGACCTGGCTAAGCCAACACCCTAGCCCTAGGCTACCCTCAACCAACACCCC s panTro4.chr17 76231092 423 + 82630442 AGGAGCAGCCCTCCTCCAACAGTTGGAAGGGTCTTCCCAAAACACAGATGAGACCTTGTCATCTTGAAACTCTTCATTGGCTCTGAATTGTCTTAGGATCAAGCCCAAACTCCTTCCGAGTCTGGGAAGGGGCCCCTCGTTCTGGGCctggctctgtctcccagggtctcccccgccttgcctgctctgtctggccacactgacagtgccctgatgggctgtgtcctcttcccctcagcgcctttgcgtgtcccagctttctg---------agccctctccccattttggggggcccacctcacctatcagggtgcagcttctcctctgagaagacttctttgctccccaagcctggatttgatgccatctgcctgtattgacctggctaagccaacaccctagccctaggctacccttgaccaacacccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67331299 417 + 73212453 aggagcggccctccttcaacagctggaagggtcttcccaaaacacagatgagaccttgtcatcttgagactcttcattggctctgaattgtcttaggatcaagcccaaactccttcagagtctgagaaggggcccctcgttctgggcctggctctgcctcccagggtctcccccgccttgtctgctctgtctggccacactgAGAGTGCCCTGATGGGCCGTGTCCTCTTCCCCTCCGCGCCTTTGAGTGTCCCAGCTTTCTG---------AG------CCCCATTTTGGGGGGCCCACCTCACCTATCAGGGTGCAGCTTCTCCTCTGAGAAGACTTCTTTGCTCCCCAAGCCTGGATTTGATGCCATCTGCTTGTATTGACCTGGCTAAGCCAACACCTTAGCCCTAGGCTACCCTCGACCAACGCCCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3657067 431 - 94967081 aggagcggccctcctccaacagttggaagggtcttcccaaaacgcacgtgagaccttgtcatcttgaaactcttcattggctctgaattgtcttaggatcaagcccaaactcctccagggtctgggaaggggcccctcgttctgggcctggctctgcct-ccagggtctcccccgccttgcctgctctgtctggccacactaacagtgccctgatgggccgtgtcctcttcccctcaacgcctttgagtgtcccagctttctgagcccagacagccctctccccattttggggggcccacctcacctatcagggtgcagcttctcctctgagaagacttctttgctccccaagcctggatttgatgccacctgcctgtattgacctggctaagacaacaccctagccctaggctaccctcgatcaacgcccc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74824651 431 + 80904711 AGGAGCGGCCCTCCTCcaacagttagaagggtcttctcaaaacac-gatgagatcttgtcatcttgaaactcttcattggctctgaattgtcttaggatgaagcccaaactccttcagagtctgggaagaggccctttgttctgggcttggctctgcctcccagggtttcccctgccttgcctgctttgtctggccacactgacagtgccttgatgggccgtgtcctcttcccctcagcactcttgtgtgttccagcttcctgagcccggacagccctctccccattttggggggcccacctcacctatcagggtgcagcttctcctctgagaagacttctttgctccccaagcccggatttgatgccatctgcctgtattgacctgactaagccaacaccctaggcctaggccaccctcgaccaatggccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74633330 431 + 80997621 AGGAGCGGCCCTCCTCcaacagttagaagggtcttctcaaaacac-gatgagaccttgtcatcttgaaactcttcattggctctgaattgtcttaggatgaagcccaaactccttcagagtctgggaaggggccctttgttctgggcttggctctgcctcccagggtttcccctgccttgcctgctttgtctggccacactgacagtgccttgatgggccgtgtcctcttcccctcagcactcttgtgtgttccagcttcctgagcccggacagccctctccccattttggggggcccacctcacctatcagggtgcagcttctcctctgagaagacttctttgctccccaagcccggatttgatgccatctgcctgtattgacctgactaagccaacaccctaggcctaggccaccctcgaccaatggccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68641041 432 + 74645514 AGGAGCGGCCCTCCTCCAACAGTTGGAAGGGTCTTCTCAAAACACAGATGAGACCTTGTCATCTTGAAACTCTTCATTGGCTCTGAATTGTCTTAGGATCAAGCCCAAACTCCTTCAGAGTCTGGGAAGGGGCCTTTCGTTCTgggcctggctctgcctcccagggtctcCCCTGCCTTGCCTGCTCTGTCTGGCCACACTGACAGTGCCTTGATGGGCCATGTCCTCTTCCCCTCAGCACCCTTGAGTGTCCCAGCTTCCTGAGCCCGGACAGCCCTCTCCCCATTTTGGGGCGGCCACCTCACCTATCGGGGTGCAGCTTCTCCTCTGAGAAGACTTCTTTGCTCCCCAAGCCCGAATTTGATGCCATCTGCCTGTATTGACCTGGCTAAGCCAACACCCTAGGCCTAGGCTACCCTCGACCAATGCCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30694471 432 - 75148670 AGGAGCGGCCGTCCTCcaacaggtggaagggtcttctcaaaacacagatgagaccttgtcatcttgaaactcttcattggctctgaattgtcttaggatcaagcccaaactccttCAGAGTCTGGGAAGGAGACCTTCGTTCTGGGCCTGGCTCTGCCTCCCAGGGTctcccctgccttgcctgctttgtctggccaaactgacagtgccttgatgggccgtttcctcttcccctcagcacccttgagtgtcccagcttcctgagcccagacagccctctccccattttggggcggccacctcacctatcagggtgcagcttctcctctgagaagacttctttgctccccaagcctggatttgatgccatctgcctgtattgacctggctaagccaacaccctaggcctaggctaccctcgaccaatgcccc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57410306 3198 - 61074082 I e calJac3.chr5 126521920 0 + 159171411 C a score=19436.000000 s hg38.chr17_GL383566v1_alt 40666 21 + 90219 TGACCACACTGTGTGTGAATT s panTro4.chr17 76231515 21 + 82630442 tgaccacactgtgtgtgaatt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67331716 21 + 73212453 TGACCACACTGTGTGTGAATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3657498 21 - 94967081 tgaccacactgtgtgtgaatt i nomLeu3.chr14 C 0 I 1477 s rheMac3.chr16 74825082 20 + 80904711 -gaccacactgtgtgtgaatt i rheMac3.chr16 C 0 I 1105 e canFam3.chr9 57410306 3198 - 61074082 I e calJac3.chr5 126521920 0 + 159171411 C e chlSab2.chr16 30694903 0 - 75148670 C e papAnu2.chr16 68641473 0 + 74645514 C e macFas5.chr16 74633761 0 + 80997621 C a score=8022.000000 s hg38.chr17_GL383566v1_alt 40687 28 + 90219 ACACCCCTGACCACACTGTGTGTGAATT s panTro4.chr17 76231536 28 + 82630442 acacccctgaccacactgtgtgtgaatt i panTro4.chr17 C 0 I 4320 s ponAbe2.chr17 67331737 28 + 73212453 ACACCCCTGACCACACTGTGTGTGAATT i ponAbe2.chr17 C 0 C 0 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e calJac3.chr5 126521920 0 + 159171411 C e chlSab2.chr16 30694903 0 - 75148670 C e papAnu2.chr16 68641473 0 + 74645514 C e macFas5.chr16 74633761 0 + 80997621 C a score=773.000000 s hg38.chr17_GL383566v1_alt 40715 8 + 90219 ACACCCCT s ponAbe2.chr17 67331765 8 + 73212453 ACACCCCT i ponAbe2.chr17 C 0 T 28 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e calJac3.chr5 126521920 0 + 159171411 C e chlSab2.chr16 30694903 0 - 75148670 C e papAnu2.chr16 68641473 0 + 74645514 C e macFas5.chr16 74633761 0 + 80997621 C e panTro4.chr17 76231564 4320 + 82630442 I a score=2583.000000 s hg38.chr17_GL383566v1_alt 40723 27 + 90219 GACCACACTGTGTGTGAATTACACCCC s ponAbe2.chr17 67331745 27 + 73212453 GACCACACTGTGTGTGAATTACACCCC i ponAbe2.chr17 T 28 T 28 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e calJac3.chr5 126521920 0 + 159171411 C e chlSab2.chr16 30694903 0 - 75148670 C e papAnu2.chr16 68641473 0 + 74645514 C e macFas5.chr16 74633761 0 + 80997621 C e panTro4.chr17 76231564 4320 + 82630442 I a score=2543.000000 s hg38.chr17_GL383566v1_alt 40750 28 + 90219 TGACCACACTGTGTATGAATTACACCCC s ponAbe2.chr17 67331744 28 + 73212453 TGACCACACTGTGTGTGAATTACACCCC i ponAbe2.chr17 T 28 I 1 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e calJac3.chr5 126521920 0 + 159171411 C e chlSab2.chr16 30694903 0 - 75148670 C e papAnu2.chr16 68641473 0 + 74645514 C e macFas5.chr16 74633761 0 + 80997621 C e panTro4.chr17 76231564 4320 + 82630442 I a score=0.000000 s hg38.chr17_GL383566v1_alt 40778 29 + 90219 TGACCACACTGTGTGTGAattacacccct e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e ponAbe2.chr17 67331772 1 + 73212453 I e calJac3.chr5 126521920 0 + 159171411 C e chlSab2.chr16 30694903 0 - 75148670 C e papAnu2.chr16 68641473 0 + 74645514 C e macFas5.chr16 74633761 0 + 80997621 C e panTro4.chr17 76231564 4320 + 82630442 I a score=206183.000000 s hg38.chr17_GL383566v1_alt 40807 241 + 90219 gaccacactgtgtgtgaattcctcctttccttgtttctgtgcccattcaagctgtaagcccctttggaagagactgggccttcacaattatcatctcagcaccaagcacagaacccacctcaataaatggttAATTTGAGACttctg----tctctc------tctttttttttttttttgagacagagtttcgctcttatcccgcaggctggagtgcaatggtacggatctcggctcactgcaacctctg s ponAbe2.chr17 67331773 245 + 73212453 GACCACACTGTGTGTGAATCCCTCCtttccttgtttctgtgcccattcgagctgtaagcccctttggaagagactgggccttcacaattatcatctcagcaccaagcacagaacccacctcaataaatggttAATTTGAGACTTCTGtctctctctc------tctttttttttttttttgagacagattttcgctcttatcccccaggctggagtgcaatggcacggatctcggctcactgcaacctctg i ponAbe2.chr17 I 1 C 0 s macFas5.chr16 74633761 251 + 80997621 gaccacactgtgtgtgaattccttctttccttgtttctgcgcccattcaagctgtaagcccctttggaggagactgggccttcacaattatcatctcagcaccaagcacagaacccacctcaataaatggttCATTTGAGACTTCTGTCTCtctctctcttttttttttttttttttttttagacagatttttgctctcatcccccatgctggagtgcaatggcacggatctcggctcactgcaacctctg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68641473 246 + 74645514 GACCACACTGTGTGtgaattccttctttccttgtttctgcGCCCATTCAAGCTGTAAGCCCCTTTGGAAGAGACTGGGCCTTCACAATTATCATCTCAGCACCAAGCACAGAACCCACCTCAATAAATGGTTCATTTGAgacttctgtctctctctc-----ttttttttttttttttttgagacagatttttgctctcatcccccatgctggagtgcaatggcacggatctcggctcactgcaacctccg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30694903 234 - 75148670 gaccacactgtgtgtgaattccttctttccttgtttctgcgcccattcaagctgtaagcccctttggaagagactgggccttcacaattatcatctcagcaccaagcacagaacccacctcaataaatg--------GAGACttctgtctctctctc---------ttttttttttttttgagacagatttttgctcttatcccccatgctgaagtgcaatggcacggatctcggcttactgcaacctccg i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=82544.000000 s hg38.chr17_GL383566v1_alt 41048 165 + 90219 cctcccaggttcaagcgattcttctgcctcagccccccaagtagctgggattacaggcatgcaccaccacgcctgcctaa--ttttttttttcttttttgagatggacctgactctgtcacccaggctggagtgcagcggcgcaatcctggctcactgcaacctcca s macFas5.chr16 74634012 167 + 80997621 cctcccgggttcaagcgattctcctgcctcagccccgcaagtagctgggattacaggcatgtaccaccacgcccggctaatttttttttttttttttttgagattgatctaactttgttgcccaggctggagtgcagtggcgcaatcctggctcactgcaacctcca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68641719 166 + 74645514 cctcccgggttcaagcgattctcctgcctcagccctgcaagtagctgggattacaggcatgcaccaccacgcctggctaa-ttttttttttttttttttgagattgatctaactttgttgcccaggctggagtgcagtggcgcaatcccggctcactgcaacctcca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30695137 167 - 75148670 ccttccgggttcaagcgattctcctgcctcagccccgcaagtagctgggattacaggcatgtaccaccacgcccagctaattttttatttttattttttgagattgatctaactctgttgcccaggctggagtgtagtggcccaatcccggctcactgcaacctcca i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e ponAbe2.chr17 67332018 0 + 73212453 C e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=326290.000000 s hg38.chr17_GL383566v1_alt 41213 391 + 90219 cctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcgcccgccaccacacccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcaaactcctgacctcacgtgatccacccgcctcagccttccaaagtgctggaattacaggcgtgagccaccacgcccagACGAGACTGCTCTCTTTTAAtttatatttatttatttattatttttagagtcagggcctcaccacattgctccggctggagtatggtggctacttacaggtgccagcacagcatacggcaacctcaaatgactggtctcaagcgatcctactgcctcagcctctcaagtagctgaaacta s ponAbe2.chr17 67332018 391 + 73212453 cctcccgggttcaagcgattctcctgcctcagcctccgaagtagctgggattacaggcgcctgccaccacacccagctaatttttgtatttttagtagagacagtgtttcaccatattggtcaggctggtttcaaactcctgacctcacgtgatccacccaccttggcctcccaaagtgctgggattacaggcgtgagccaccacgcccagccAAGACTTCTCTCTTTTAAtttatatttatttatttattatttttagagtcagggtctcaccacattgctccggctggagtacagtggctacttacaggtgccagcacagcacacggcaacctcaaatgactggtctcaagcgatcctactgcctcagcctcttaaatagctgaaacta i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 74634179 387 + 80997621 cctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattataggtgtgcaccaccacacctagctaatttatgtatttttagtagatacagtgtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccacccatcttagcctcccaaagtgctgggattacaggcgtgagccaccacgcccagccGAGACTTCTCTCttttaatttg----tatttatttattatttttagagtcagggtctcaccacattgctcgggctggactgcagtggctacttacaggtgccagcacagcacatggcagcttcaaatgcctggtctcaagcgatcctcctgcctcagcctctcaagtagctgaaacta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68641885 387 + 74645514 cctcctggggtcaagtgattgtcctgcctcagcctcccgagtagctggaattacaggtgcgcaccaccacacctagctaatttatgtatttttagtagatacagtgtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccacccgtcttagcctcccaaagtgctgggattacaggcgtgagccaccacgcccagccgagacttctctcttttaatttg----tatttatttattatttttagagtcagggtctcaccacattgctcaggctggagtgcagtggctacttACAGGTGCCAGCACAGCACATGGCAGCCTCAAAtgcctggtctcaagcgatcctcccgcctcagcctctcaagtagctgaaacta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30695304 387 - 75148670 cctcccgggttcaagtgattttcctacctcagtctgccgagtagctgggattacaggtgcacaccaccacacctagctaatttatgtatttttagtagatacagtgtttcaccatgttggtcaggctggtctcaaactcctgacctcaggtgatccacccgtctgagcctcccaaagtgctgagattgcaggcgtgagccaccacgcccagccgagacttctctcttttaatttg----tatttatttattatttttagagtcagggtctcaccacattgctcaggctggAGTGCGGTGGCTACTTACAGGTGCCGGcacagcacatggcagcctcaaatgcctggtctcaagcgatcctcctgcctcagcctctcaaatagctgaaatta i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74825102 1105 + 80904711 I e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=514320.000000 s hg38.chr17_GL383566v1_alt 41604 428 + 90219 gagATAtctttattcttaatgtaagtatttagtgctataagtatccctctcggctgggcacagtggttcacacaggtaatcccagtactttaggaggctgaagcgggaagatcacttgaggccaggagttcaagact-----gagcaacct--caaaaccctgtttct-----agcaaaaaaagaaaaaaagcaagctaggtgtggggggcatgttcctgtagtcccagttcatcaggaggctgaggtgggaggattgcttgagcctgaggagtcgaggctgcagtgggctgtgatcacaccactacactccagcctgggcaacagagcaagactctgtctcaaaaaaataataaaaaataaaaataagaaaatttctttctcagcattgcctcagatgcatcccacatattttggtatgctgtcctttaattctcattc s ponAbe2.chr17 67332409 430 + 73212453 GAAATAtctttatttttaatgtaagtatttagtgctataaatatccctctcagctgggcacagtggttcacactggtaatcccagtactttaggaggctgaagcgggaagatcacttgaggccaggagttcgagactagcctgagcaacct--cgaaaccctgtttct-----agcaaaaaaagacaaaaagcaagctaggtgtgggggatatgttcctgtagtcccagttcatcaggaggctgaggtgggaggactgcttgagcctggggagtcgaggctgcagtgggctgtgattacaccactacactccagcctgggcaacagagcaagaccctgtctcaaaaaaataatataaaataaaaataa---aatttctttctcagcattgcctcagttgcatcccacatattttggtatgctgtcctttaattctcattc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74826207 421 + 80904711 GAGATAtctttctttttaatgtaaatatttagtgctatacatttccctctcgactgggcacagtggttcacgctggtaatcctagtacttaaggaggctgaggcaggaacatcacctgaacacaggagattaaggctaaatt-----------tgggagccactc--------aaaaaaaaaaaaaaaaaagcaagctaggtatggggggcatgttcctgtagtcccagctaatcaggagactgaggtgggaggattgcttgagcctgggtagtcgaggctgcagtgagccgtaatcacaccactatactccagcctgggcaacagagcaagaccctgtctcaaaaaaataataaaaaataaaaataagaaaatttccttctcagcattgtctcggttacatcccacatattttggtatgctgtcctttaattctcattc i rheMac3.chr16 I 1105 C 0 s macFas5.chr16 74634566 440 + 80997621 gagATAtctttctttttaatgtaaatatttagtgctatacatttccctctcgactgggcacagtggttcacgctggtaatcctagtacttaaggaggctgaggcaggaacatcacttgaagccaggagttcaagactagcctgagcaacgaagtgagaccctgtttctacaaaaaaaaaaaaaaaaaaaaagcaagctaggtatggggggcatgttcctgtagtccaagctaatcaggagactgaggtgggaggattgcttgagcctgggtagtcgaggctgcagtgagctgtaatcacaccactatactccagcctgggcaacagagcaagaccctgtctcaaaaaaataataaaaaataaaaataagaaaatttccttctcagcattgtctcggttacatcccacatattttggtatgctgtcctttaattctcattc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68642272 437 + 74645514 gagatatctttctttttaatgtaaatatttagtgctatacatttccctctcgactggacacagtggttcatgctggtaatcctagtacttaaggaggctgaggcgggaacatcacttgaagccaggagttcgagactagcctgagcaacgaagcgagaccctgtttctac---caaaaaaaaaaaaaaaaagcaagctagGTATGGggggcatgttcctgtagtcccagctaatcaggagactgaggtgggaggattgcttgagcctgggtagtcgaggctgcagtgagctgtaatcacaccactatactccagcctgggcaacagggcaagaccctgtctcaaaaaaataataaaaaataaaaataagaaaatttcctTCTCAGCATTGCCTCGGTTACATCCCACATATTTTGGTATGCTGTCCTTTAATTCTTATTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30695691 439 - 75148670 gagAtctctttctttttaatgtaaatatttagtgctataaatttccttctcgactgggcacagtggttcacgctgataatcctagtactttaggaggctgaggcgggaacatcacttgaagccaagagttcgagactagcctgagcaacgaagcaagaccctgtttctacca-aaaaaaaaaaaaaaaaaagcaagctaggtgtgggggtcgtgttcctgtagtcccagctaatcaggaggctgaggtgggaggattgcttgaacctgggtagttgaggctgcagtgagctgtaatcacaccactatactccagcctgggcaacagagcaagaccctgtctcaaaaaaataatgaaaaataaaaataagaaaatttccttctcagcgttgcctcagttacatcccacatattttggtatgctgtcctttaattctcattc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3657519 1477 - 94967081 I e canFam3.chr9 57410306 3198 - 61074082 I e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=3766889.000000 s hg38.chr17_GL383566v1_alt 42032 2169 + 90219 agttttatagatttcttaattttctttgagacttcctcattgacgtggatatttagaggtgtactgttcaatttccaagtgtttagagattttcctgtagtctttctgttactga----ttttttttttttttttttgaaacagagtctcactctgtcacccaggctgaagtgcagtggcaccatcacagctcaaccccaccccccatcagcagtcttggccccacaatccctaggctcaagcaattctcgtgcttcagcctcccaagtagttgggactacaggcatgtgccaccacacccggctattttttgtaactttagtagagtcggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtcatccac---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------atcacttctggcctccGtagtttcagatgagataatttgaactggtgtccct-ataggtaatgtgttgtttctctggctgttctgaggagatttttt-gtctttagttttcagaagtttaatgatgatatctcagtgtagatttctttggcttcttctgtttgaagttcagtttcctgaatctgtaagcttatgtcttttaccagatttggaaagttttcagccattatttcttcaaatactccttcagcctcactc----tcttctcctccttagcccctatgatgtgagtgtcagatttgtttgttatggtcccattggatgtggacgttctgtttatttcttatccgtctattttctccctgtggttcagactgggtactttggattgatctgtccccagattcactgattctgtcgtctgtcatttccactctacaactgagcccatcagggagtttttaaaatttctgcaatgacatttttcagttctgtaatttccatttggttctttctaaatacccactatttctttgctgagaatttctatattttcatttgtttcaagagaatttgcaattgcttgttgaattttttatttttatgtgtttttt-----------------ttgatggttgctttaaaatcctggtcacatggctgggcgcagtggctcatgcctgtaattccagcactttgggaggccgaggagggtggatcacttgaggtcagcagttcgaggccagcctggctaacatagtgaaagcctgtctttattaaaaatacaaaaattagccgggtatgatggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaactcaggaagcagaggttgcagtgagctgagatcgcaccactgcactccagcctgtgtgacagagtaaga--ctgtctccaaaaaaaa-----aaaaaa--aagagtaaaatcctggg-------cacgtaactccaacgtctgattcatctcagggttcagttgacggtcttcccactcacattgtgattttcgtagttcttggtgggatga---gtgaatttcaccatatcctggacattgtggctattaggtgaggagacttcaggtcctgtttgcattttttactttggtagcagcggccctgcttaggtttagcacccaggtcttgggctacttttg-ggggctgtggttccaatgaaaatctgatttgcagagcctctgccgtgctatagaggtcagctcggcttgtgtggtgctgcttaaggaggcagaaggagcttt-----------cccaggctggacattcattgcctccaggtgggagaagggagtctcccgctcacagggacagac----------aggccttctgcttgtggtgggctttctccctgccatcaacgtctccccctctctctgctgtgccatgattttgggtgggggagtggaatttcaggtccagtgaggaggaaagggttaaccctggccaataattagcaggagggtgctgggccaacccctttggtggttctgcctggcttgcttggtgggttttt---tgttgttcatt---------------ttttttttttttttttt-gagtt-------tgtcgcccagcctggagtgcaatggcgcaaccttggctcattgcaacctctgcctcccaggttcaagcgattctcctg---cctcagcctcctgagtagctgggaccacaggcacccaccaccacgcccggctaattttt-gtatttttagtagaggcggggtttcaccatgttggccaggctggtctcaaactcctgacttcgggtgatccacccgcctcagcctcccaaagtgc s ponAbe2.chr17 67332839 2264 + 73212453 agttttgtagatttcttaattttctttgagacttcctcattgacgtggatatttagaggtgtattgtttaatttccaagtgtttagagattttcctgtagtctttctACAA--GA----ttttttttttt--------aaacagagtctcactctctcacccaggctgaagtgcagtggtgctatcaccgctcaaccccacccccagtcatcaggcttggccc-acaatccccaggctcaagcaattctcgtgcttcagactcccaagtagttgggactacaggcatgtgccaccacacccggctattttttgtaattttattagagccggggtttcaccatgttggctaggctggtctcaaactcctgacctcaagtcatccacctgcctcagcctcccagagtgctggg--------------------------------------------------------------------------------------------at------------------------------agcaggcgtgagctacggcgcccggccTTTCTTTCCCTCGTTTGCTTCAATCATcacatcacttctggcctccgtagtttcagatgagataatttgaactggtgtcccttataggtaatgtattgtttctctggctgttctcaagagctttttttgtctttagttttcagaagtttaacgatgatatctcggtgtagatttatttggcttattctgtttgaagttcagtttcctgaaactgtaagcttatgtcttttaccaaatttggaaagttttcagccattatttcttcaaatattccttcagcctcactc----tcttctcctccttagcccttatgatgtgagtgtcagatttgtttgttatggtcccattggacttggaggttctgtttatttcttatccatctattttctccctgtggttcagactgggtactttggattgatctgtccccaaattcactgattctgtcctctgtcatttccactctacaactaagcccatcagggagttttttaaatttctgcaatgacattttttagttctgtaatttccattcggttctttctaaatacctactatttctttgctgagaatttctatattttcatttgtttcaagataatttgtaattgcttgttgaattttttatttttatgttttttttattttttatct-atttttttattattgctttaaaatcctggtcacatggctgggtgcagtggctcatgcctgtaatcccagcactttgggaggctgaggagggtggatcacttgaggtcagcagttcgaggccagcctggccaacatagtgaaagcttgtctttattaaaaatacaaaaattagccgggtatgatggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaactcaggaagcagaggttgcagtgggctgagatcgtaccactgcactacagcttatgtgacagagtgagattctgtctccaaaaaaaa-----aaaaga----gagtaaaatcctggt-------catgtaactccaacatctgattcatctctgggttcagttgacagtcttcccactcacattgtgattttcgtagttcttggtgggatga---gtgaatttcaccgtatcctggacattgtggctattacgtgaggagacttcaggtcctgtttacattttttattttggtagcagcggccctgcttaggtttagcacccaggtcttgggctacttttg-ggggctatggttccaatgaaaatctgatttgcagagcctctgccgtgctatagaggtcagctcggcttgcgtggtgctgcttgaggaggcagaaggagcttt-----------cccaggctggacgttcattgcctccaggtgggagaagggagtctcccgttcacagggacagac----------agaccttctgcttgtggtgagctttctccctgccatcaacgtctccccctctctctgctgtgcagtgattttgggtggggaagcggaatttcaggtccagtgaggaggaaagggttaaccctggccaataattagcaggaggttgctgggccaacccctttggtggttctgcctggcttgcttggtgggttttt---tgttgttgact---------------tttttttttttttagtt-taact-----cctgtcgcccaggctggagtgcaatggtacaaccttggctcattgcaacctccacctcccaggttcaagcggttctcctg---cctcagcctcctgagtagctgggatcacaggcacccaccaccatgcctggctaattttttgtatttttagtagaggcggggtttcaccatgttggccaggctggtctcaaactcctgacttcaggtgatccacccgcctcagcctcccaaagtgc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3658996 2297 - 94967081 agttttatagatttcttaattttctttgagccttcctcattgacgtggatatttagagatgtattgtttaatttccaagtgtttagagattttcctgtagtctttctgttactga----ttttttttttttttttttgaaacagagtctcactctgtcacccaggctggagtgcagtggctccatcacagctcaaccccaccccccatcagcagtcttggccccacaatccccaggctcaagcaattctcgtgcttcagcctcccaggtagttgggactacagacatgtgccaccatgcccggctattttttgtatttttagtagagtcagggtttcatcatgttggccaggctggtctcaaactcctgacctcaagtcatccgcctgcctcagcctcccagagtgctggg--------------------------------------------------------------------------------------------atagcaggcgggagccatggcgcctggccTTC---------------------------TTTCTTTCGCTCATTTGCTTCAATCATcacatcacttctggcctccgtagtttcagatgagataatttgaactggtgtccct-ataggtaatgtattgtttctctggctgttctcaggagctttttttgtctttagttttcagaagtttaatgatgatatctcggtgtagatttatttggcttattctgtttgaagttcagtttcctgaatctgtaagcttatgtcttttaccaaatttggaaagttttcagccattatttcttcaaatactccttcagcctcactc----tcttctcctccttcgcccctatgat----gtgtcagatttgtttgttatggtcccattggacttggaggttctgtttatttcctatccgtctattttctccttgtggttcagactgggtactttggattgatctgtccccaaattcactgattctgtcttctgtcatttccactctacaactgagcccatcagggagtttttaaaatttctgcaatgacatttttcagttctgtagtttccatttggctctttctaaatacctactatttctttgctgagaatttcgatattttcttttgtttcaagagaatttgtaattgcttgttgaattttttatttttat-tttattttatttttttttt------ttgatggttgctttaaaatcctggtcacatggctgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggagggtggatcacttgaggtcagcagttcgaggccagcctggccaacatagtgaaagtctgtctttactaaaaatataaaaattagccggctatgatggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgatctgagatcgcgccactgcactccagcctggtcgacagagtgaga--ctgtctcaaaaaaaaa-----aaaaaaagaagagtaaaatcctggtcacgtaacacgtaactccaacgtctgcttcatctcagtgttcagttgacggtcttcccactctcattgtggttttcctagttcttggtgggatga---gtgaatttcactgtatcctggatattgtggctgttatgtgaggagacttcaggtcctgtttacattttttattttggtagcagcggccctgcttaggtttagcacccaggtcttgggctacttttg-ggggccgtggttccaatgaaaatctgatttgcagagcctccaccgtgctatagaggccagctcggcttgtgtggtgctgcttaaggaggcagaaggagcttt-----------cccaggctggacgttcattgcctccaggtgggagaagggagtctcccgctcacagggacagacagtaccttctaggcctgctgcttgtggtgggctttctccctgccatcaacgtctccccctctctttgcggtgcagggattttgggtgggggagcggaatttcaggtccagtgaggaggaaagggttaaccctggccaataattagcaggaggttgctgggccaacccctttggtggttctgcctggcttgcttggtgGGTTTTTTCCTGTTGCTCAtt---------------ttttttttttttttttt-gagtttaactcctgtcacccaggctggagtgcaacggcgcaaccttggctcaccgcaacctccgcctcccaggttcaagcgattctcctgcctcctcagcctcctgagtagctgggattacaggcacccaccaccacgcctggctaattttttatatttttagtagaggcggggtttcaccatgttggtcaggctggtctcaaactcctgacttcaggtgatccacccacctcagcctcccaaagtgc i nomLeu3.chr14 I 1477 C 0 s rheMac3.chr16 74826628 2290 + 80904711 agttttatagatttcttaattttctttgagacttcctcattgacgtggatatttagaggtgtattgtttaatttccgagtgtttagagattttcctgtagtctttctgttactga----------ttttttttttttgacacagagtctcactctgtcacccaggctggagtgcagtggcacgaccacagctcaaccc--acccccatcagcagtcttgcccccgccaaccccaggctcaagcaattctcgtgcttcagtctcccaagtagctgggactacaagcacatgccaccacccctggttattttttctgtttttagtagagacagggtttcaccatgttggccaggctggtcccaaactcctgacctcaagtcatccacctgcctcagcctgccaggctgcttggctagcaggcgtgagccatggcgcccggccttct-----------------------------------------------------------------------------------------------------------------------ttctttcccttgtTTGCTTCAATCATcacatcacttctggcctccgtagtttcagatgagataatttgaactggtgtccct-ataggtaatgtattgtttctctggcagttctcaagagctttttttgtctttagttttcagaattttaatgatgatatcttactgtagatttctttggcttattctgtttgaagttcagtttcctgaatctgtaagcttctgttgtttaccaaatttggaaagttttcagccattagttcttcaaatactccttcagcctctctctctttcttctcctccttagcccctgtgatgtgagtgtcagatttgtttgttatggtcccattggacttggaggttctgtttatttcttatccgtctattttctccctgtggttcagattgggtacttccgattgatctgtccccaaattcactgattctgtcctctgtcatttccactctacaactgagcc--tcagggagtttttaaaatttctgcaatgacatttttcagttctgtaatttccatttggttctttct-aatacctactatttctttgctgagaagttctatattttcatttgtttcaagagaatttgtaattgcttgttgaattttttatttttac----gtttgtttgtttgttttgttttttgatggttgctttaaaatcctggtcacatggctgggctcagtggctcacacctgtaatcccagcactttgggaggacgaggagggtggatcacttgaggtcagcagttcgagaccagcctggccaacatggcgaaagcctgtg--tactaaaaatacaaaaattagccgtatataatggcacataactgaaatcccagctactcaggaggctgaggcaggagaatcgcttgaactcaggaagcagaggttgcagtcagctgagatcgcaccaatgcattccagcctgagtgacagagtgaaactctttctccaaaaaaaa-----aaaaaa-----agtaaaatcctggt-------cacataactccaacatctgattcatctgagtgttcagttgacggtcttcccactcacattgtgattttccaagttcttggtgggatga---gtgaatttcactgtatcctagtcattgtggctattatgtgaggaggctccaggtcctgtttacattttttattttagtagcagctgctctgcttaggtttagcacgcaggtcttgggcgacttttgcggggctgtggttccaatgaaaatctaatttgcagagcctctgcagtgctgctgaggtcagctcggcttgtgtggtgctgcttaagtgggcagaaggagctttctcaggctggtcccaggctggacgttcattgcctccaggtgggagaaggcagtcttccgctcac-gggacagacagtacttcccaggcctgctgcttgtggtgggctttctccctgccatcaatgtctcccgctttctctgctgtgcagtgattttgggtggggaagcggaatttcaggcccagtgaggaggagagggttaaccctggccgataattagcaggaggttgctgggccaacccctttggtggttctgcctggcttgcttggtgggttttt---tgttgttgttg---------------ttttcttttttggagacagagttttactcccgtcgcccaggctggagtgtaatggcacaacctgggctcactgcaacctcagcctcccaggttcaaacaattctcctg---cctcagcttccctagtagctgggaccacaggcacccaccaccactccaggctaa-tttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaaactcctgacttcaggtgattcgcccacctcggcctcccaaaatcc i rheMac3.chr16 C 0 I 48 s macFas5.chr16 74635006 2301 + 80997621 agttttatagatttcttaattttctttgagacttcctcattgacgtggatatttagaggtgtattgtttaatttccgagtgtttagagattttcctgtagtctttctgttactgattttttttttttttttttttttgacacagagtctcactctgtcacccaggctggagtgcagtggcacgaccacagctcaaccc--acccccatcagcagtcttgcccccgccaaccccaggctcaagcaattctcgtgcttcagtctcccaagtagctgggactacaagcacatgccaccacgcctggttattttttctgtttttagtagagacagggtttcaccatgttggccaggctggtcccaaactcctgacctcaagtcatccacctgcctcagcctgccaggctgcttggctagcaggcgtgagccatggcgcccggccttct-----------------------------------------------------------------------------------------------------------------------ttctttcccttgtTTGCTTCAATCATcacatcacttctggcctccgtagtttcagatgagataatttgaactggtgtccct-ataggtaatgtattgtttctctggcagttctcaagagctttttttgtctttagttttcagaattttaatgatgatatcttactgtagatttctttggcttattctgtttgaagttcagtttcctgaatctgtaagcttctgttgtttaccaaatttggaaagttttcagccattagttcttcaaatactccttcagcctctctctctttcttctcctccttagcccctgtgatgtgagtgtcagatttgtttgttatggtcccattggacttggaggttctgtttatttcttatccgtctattttctccctgtggttcagattgggtacttccgattgatctgtccccaaattcactgattctgtcctctgtcatttccactctacaactgagcc--tcagggagtttttaaaatttctgcaatgacatttttcagttctgtaatttccatttggttctttct-aatacctactatttctttgctgagaagttctatattttcatttgtttcaagagaatttgtaattgcttgttgaattttttatttttat----gtttgtttgtttgttttgttttttgatggttgctttaaaatcctggtcacatggctgggctcagtggctcacacctgtaatcccagcactttgggaggacgaggagggtggatcacttgaggtcagcagttcgagaccagcctggccaacatggtgaaagcctgtg--tactaaaaatacaaaaattagccgtgtataatggcacataactgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaactcaggaagcagaggttgcagtgagctgagatcgcaccactgcattccagcctgagtgacagagtgaaactctgtctccaaaaaaga-----aaaaaa-----agtaaaatcctggt-------cacataactccaacatctgattcatctgagtgttcagttgacggtcttcccactcacattgtgattttccaagttcttggtgggatga---gtgaatttcactgtatcctggtcattgtggctattatgtgaggaggctccaggtcctgtttacattttttattttagtagcagctgctctgcttaggtttagcactcaggtcttgggcgacttttgcggggctgtggttccaatgaaaatctaatttgcagagcctctgcagtgctgctgaggtcagctcggcttgtgtggtgctgcttaagtgggcagaaggagctttctcaggctggtcccaggctggacgttcattgcctccaggtgggagaagggagtcttccgctcac-gggacagacagtacttcccaggcctgctgcttgtggtgggctttctccctgccatcaatgtctccccctttctctgctgtgcagtgattttgggtggggaagcggaatttcaggcccagtgaggaggagagggttaaccctggccgataattagcaggaggttgctgggccaacccctttggtggttctgcctggcttgcttggtgggttttt---tgttgttgttg---------------ttttcttttttggagacagagttttactcccgtcgcccaggctggagtgtaatggcacaacctgggctcactgcaacctcagcctcccaggttcaaacaattctcctg---cctcagcttccctagtagctgggaccacaggcacccaccaccactccaggctaattttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaaactcctgacttcaggtgattcgcccacctcggcctcccaaaatcc i macFas5.chr16 C 0 I 15 s papAnu2.chr16 68642709 2303 + 74645514 AGTTTTAtagatttcttaattttctttgagACTTCCTCATTGACGTGGATATTTAGaggtgtattgtttaatttccgaGTGTTTAGAGATTTTCCTGTagtctttctgttactga------ttttttttttttttttgacacagagtctcactctgtcacccaggctggagtgcagtggcacgatcatagctcaacCC--ACCCCCATCAGCAGTCTTGCCCCCGCCAaccctaggctcaagcaattctcgtgcttcagtctcccaagtagctgggactacaagcacatgccaccacgcctggctactttttctgtttttagtagagacggggtttcaccatgttggccaggctggtcccaaactcctgacctcaagtcatccacctgcctcagcctgccaggcTGCTTGG-------------------------------ctagcaggtgtgagccacggcgtccggccttct----------------------------------------------------------------------------------------ttctttcccttgtttGCTTCAATCATCACATCACTTCTGGCCTCCGTAGTTTCAGATGAGATAATTTGAACTGGTGTCCCT-ATAGGTAATGTATTGTTTCTCTGGCAGTTCTCAAGagctttttttgtctttagttttcagaagtttaatgATGATCTCTTACTGTAGATTTCTTTGGCTTATTCTGTTTGAAGTTCAGTTTCCTGAATCTGTAAGCTTCTGTCTTTTaccaaatttggaaagttttcagccattagtTCTTCAAATACTCCttcagcctctctctctttcttctcctccttagCCCCTGTGATGTGAGTGTCAGATTTGTTTGTTATGGTCTCATTGGACTTGGAGGTTCTGTTTATTTCTTATCCATCTATTTTCTCCCTGTGGTTCAGATTGGGTACTTCGGATTGATCTGTCCCCAAATTCACTGATTCTGTCCTCTGTCATTTCCACTCTACAACTGAGCC--TCagggagtttttaaaatttctgcaatgacatttttcagttctgtaatttccatttggttctttct-aATACCtactatttctttgctgagaagttctatattttcatttgtttcaagagaatttgtaattgcttgttgaattttttattttcacgtttgtttgtttgtttgttttgttttttgatggttGCTTTAAAATCCTGGTCacatggctgggctcagtggctcacacctgtaatcccagcactttgggaggatgaggagggtagatcacttgaggtcagcagtttgagaccagcctggccaacatggtgaaagcctgtg--tactaaaaatacaaaaattagccgtgtatAATGgcacataactgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaactcaggaagcagaggttgcagtgagctgagatcacgccactgcattccagcctgagtgacagagtgaaactctgtctccaaacaacaacaacaaaaaa-----agtaaaatcctgGT-------CACATAACTCCAACATCTGATTCATCTGAGTGTTCAGTTGACGGTCTTCCCACTCACATTGTGATTTTCCAAGTTCTTGGTGGGATGA---GTGAATTTCACCGTATCCTGGTCATTGTGGCTATTATGTGAGGAGGCTCCAGGtcctgtttacattttttattttggtagcaGCTGCTCTGCTTAGGTTTAGCACGCAGGTCTTGGGTGACTTTTGCGGGGCTGTGGTTCCAATGAAAATCGAATTTGCAGAGCCTCTGCAGTGCTGCTGAGGTCGGCTCGGCTCGTGTGGTGCTGCTTAAGCGGGCAGAAGGAGCTTTCTCAGGCTGGTCCCAGGCTGGACGTTCATTGCCTCCAGGTGGGAGAAGGCAGTCTTCCGCTCAC-GGGACAGACAGTACTTCCCAGGCCTGCTGCTTGTGGTGGGCTTTCTCCCTGCCATCAATGTCTCCCCCTTTCTCTGCTGTGCAGTGATTTTGGGTGGGGAAGCGGAATTTCAGGCCCAGTGAGGAGGAGAGGGTTAACCCTGGCCGATAATTAGCAGGAGGTTGCTGGGCCAACCCCTTTGGTGGTTCTGCCTGGCTTGcttggtgggttttt---tgttgttgttt---------------ttttcttttttggagacagagttttactcccgtcacccaggctgcagtgtaatggcacaacctgggctcactgcaacctcagcctcccaggttcaaacaattctcctg---cctcagcttccctagtagctgggaccacaggcacccaccaccactcccggctaa-tttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaaactcctgacttcaggtgatccgcccgcctcggcctcccaaaatcc i papAnu2.chr16 C 0 I 15 s chlSab2.chr16 30696130 2305 - 75148670 agttttatagatttcttaattttctttgagacttcctcattgacgttgatatttagaggtgtattgtttaatttccgagtgtttagagattttcctgtactctttctgttactga-------tttttttttttttttgacacagagtcttactctgtcacccaggctggagtgcagtggcacgatcacagctcaaccc--acccccatcagcagtcttgccccc-ccaaccccaggctcaagcaattctcatgcttcagtctcccgagtagctgggactacaagcacatgccaccacgcctggctattttttctgtttttagtagagacggggtttcaccatgttggccaggctggtcccaaactcctgacctcaagtcatccacctgcctcagcctgccagactgcttgg-------------------------------ct-------------------------------agcaggcgtgaggcacggcgcccggccttc---------------------------------------------------------tttctttcccttgtTTGCTTCAATCATcacatcacttctggcctccgtagtttcagttgagatagtctgaactggtgtccct-ataggtaatgtattgtttctctggcagttctcaagagctttttttgtctttagttttcagaagtttaatgatgatatcttactgtagatttctttggcttattctgtttgaagttcagtttcctgaatctgtaagcttctgtcttttaccaaatttggaaagttttcagccattagttcctcaaatactccttcagcctctctctctttcttctcctccttagcccctgtgatgtgagtgtcagatttgtttgttatagtctcattggacttggaggttctgtttatttcttatccgtctattttctccctgtggttcagattgggtacttcggattgatctgtccccaaattcactgattctgtcctctgtcatttccactctacaactgagcc--tcagggagtttttaaaatttctgcaatgacatttttcagttctgtaatttccatttggttctttct-aatacctactatttctttgctgagaagttctatattttcatttgtttcaagagaatttgtaattgcttgttgaattttttatttttac-tttttttgtttgtttgttttgttttttgatggttgctttaaaatcctggtcacatggctgggctcagtggctcacacctgtaatcccagcacttcgggaggacgaggagggtggatcacttgaggtcagcagttcgagaccagcctggccaacatggtgaaagcctgtc--tactaaaaatacaaaaattagctgtgtataatggcacataattgtaatcccagctactcaggaggccgaggaaggagaatcgcttgaactcaggaagcagaggttgcagtgagctgagatcgcaccactgcattccagcctgagtgacagagtgaaactctgtctccaa-----------aaaaaa-----agtaaaatcctggt-------cacgtaactccaacgtctgattcatctgagtgttcagttgacggtcttcccactcacattgtgattttccaagttcttggtgggatgagtggtgaatttcaccgtatcctggtcattgtggctattatgtgaggaggctccaggtcctgtttacattttttattttagtagcagctgccctgcttaggttgagcacgcaggtcttgggcgacttttgcggggctgtggtgccaatgaaaatctaatttgcggagcctctgcagtgctgctgaggtcagctcggctcgtgtggtgctgcttaagcgggcagaaggagctttcccaggctggccccaggctggacgttcattggctccaggtgggagaagggcgtcttccgcgcgc-gggacagaccg--cttcccaggcctgctgcttgtggcgggctttctccctgccatccatgtctccccctttctctgctgtgca-tgattttgggtggagaagcggaatttcaggcccagtgaggaggagagggttaaccctggccgataattagcaggaggttgctgggccaacccctttggtggttctgcctggcttgcttggtgGGTTTTT---TGttgctgttgttgttgattttttttttttcttttttggaggcagagttttactcccgtcacccaggctggagtgtaatggcacaacctcggctcactgcaacctcagcctcccaggttcaaacaattcttctg---cctcagcttccctagtagctgggaccacaggcacccaccaccactcccggctaattttttgtatttttagtagagacggggtttcaccgtgttggccaggatggtctcaaactcctgacttcaggtgatccacccgcctcggcctcccaaaatcc i chlSab2.chr16 C 0 I 15 e canFam3.chr9 57410306 3198 - 61074082 I e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=24846.000000 s hg38.chr17_GL383566v1_alt 44201 26 + 90219 tgggatcac-------aggtgtgagccactgtg s ponAbe2.chr17 67335103 26 + 73212453 tgggatcac-------aggtgtgagccaccgtg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3661293 26 - 94967081 tggggtcac-------aggtgtgagccaccgtg i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74637322 33 + 80997621 tgggattacggattataggcatgagtcaccacg i macFas5.chr16 I 15 C 0 s papAnu2.chr16 68645027 33 + 74645514 TGGGATTacggattataggcatgagttaccacg i papAnu2.chr16 I 15 C 0 s chlSab2.chr16 30698450 33 - 75148670 tgggattacggattacaggcatgagtcactgtg i chlSab2.chr16 I 15 C 0 e canFam3.chr9 57410306 3198 - 61074082 I e rheMac3.chr16 74828918 48 + 80904711 I e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=495817.000000 s hg38.chr17_GL383566v1_alt 44227 298 + 90219 cccagctttttt-tttttttttt--------------tttaca-ggtcttactctgttgcccacgctggagtacagtggtgcgatcataactcactgcagccttgatctcctgggctcaagtgatcctcccacctcagcctcctgagtagctgggactgtacgcagctgccactatgcccggctaatttttaagttttctttgtagagacagggtctgctgggttacccaggctggtatcaaatccctggtctcaagagatcctcctgtcttgaagcgctgggattacagctgtgagcaatcgggcccagcctt s ponAbe2.chr17 67335129 311 + 73212453 cccggctTtttt-tttgttttttgt-ttttgtttgtttttaca-ggtcttactctgttgcccacgctggagtgcagtggtgcgatcataactcactgcagtcttgacctcctgggctcaagcgatcctcccacctcagcctcctgagtagctgggactgtacgcaggtgccactatgcccagctaatttttaagttttctttgtagagacagggtctgctgggttacccaggctggtatcaaacccctggtctcaagagatcctcctgtcttgaagcactgggattacagctgtgagcaatcgggcccagcctt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3661319 313 - 94967081 cccggcTTttttgtttgtttgttttgttttgttttgttttACA-ggtctcactctgttgcccacgctggagtgcagtggtgcgatcataagtcactgcagccttgacctcctgggctcaagtgatcctcccacctcagcctcctgagtagctgggactgtaagccggtgccactatgcccggctaacttttaagtttcctttgtagagacagggtctgctgggttacccaggctggtatcaaactcctggtctcaagagctcctcctgtcttgaagcgctgggattacagctgtgagcaatcgggcccagccTT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74828966 307 + 80904711 cctggctttttt-ttctttc------tttttttttttttgccagggtcttaccctgttgcccacgctgaattgcagtggtgtgatcataacttaatgcagccttgacctcctgggctcaagtgatcctcccacctcagccttctgagtagctgggactgtgagtgtgtgccactatgaccagctaatttttaagttttctttgtagagacagggtctgctagattactcaggctggtatcaaactcctggtctcaacagatcctcccgtcttgaagtgctgagattacagctgtgagcaatcatgcccagattt i rheMac3.chr16 I 48 C 0 s macFas5.chr16 74637355 306 + 80997621 cctggctttttt-ttctttc-------tttcttttttttgccagggtcttactctgttgcccacgctggagtgcagtggtgtgatcataacttaatgcagccttgacctcctgggctcaagtgatcctcccacctcagccttctgagtagctgggactgtaagtgtgtgccactatgaccagctaatttttaagttttctttgtagagacagggtctgctaggttactcaggctggtatcaaactcctggtctcaacagatcctcccgtcttgaagtgctgagattacagctgtgagcaatcatgcccagattt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68645060 302 + 74645514 cctggctttttt-ttctttc-----------ttttttttgccagggtcttactctgttgcccacgctggagtgcagtggtgcgatcataacttaatgcagccttgacctcctgggctcaagtgatcctcccacctcagccttctgagtagctgggactctaagtgtgtgccactatgaccagctaatttttaagttttctttggagagacagggtctgctGGGTTACTcgggctggtatcaaactcctggtctcaacaGATCCTCCCGTcttgaagtgctgagattacagctgtgagcaaTCATGCCCAGATTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30698483 295 - 75148670 cctggctttttt-------------------tttttttggacaggggcttactctgttgcctacgctggagtgcagtggtgcaatcataacttaatgcagccttgacctcctgggttcaaatgatcctcccacctcagcctcctgagtagctgggactgtaagtgtgtgccactatgaccagctaatttttaagttttctttgtagagacagggtctgctgggttacccaggctggtatcaaactcctggtctcaacagatcctcctgtcgtgaagtgctgggattacagctgtgagcaatcatgcccagcttt i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57410306 3198 - 61074082 I e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=867884.000000 s hg38.chr17_GL383566v1_alt 44525 439 + 90219 gcctagtgtgttggggcgacttgcctttaatctaggagagaaaggagcctacttgg-ctgccttctgttgctaggtcgggagttgggaaatgcacgcctggg--cgggtcctgtattgggtgggggtg-aggggtgtcataatgccctgttgataaatattcctgacccagccttggggtcctttaccagctctcctgctccttc--cacctcagggccctcttagggttgcctcttacattctttccaggg------------cttagcagacaggaacagggagggtcgggtttaggccatcttacccagaccggaagtctctAAGTGTTTGATTGAGTGTTTGTTTGAA-GAAAGTGATGAACCCAGGACCTCGAGCCA-GGAAGATTTTTCCCGGTGAAAAGCAGAGGGATTGACTCACGCTCG-GTTCTGAGTTCCAGGCCTGACTCCAGGGCTC s ponAbe2.chr17 67335440 436 + 73212453 gcccagtgtgttggggcgacttgcctttaatctaggagaaaaaggaacctacttgggctgccttctcctgctaggttgggagttgggaaatgcatgcctggg--tgggtcctgtattgggtgggggtg-aggggtgtcataatgccctgttgctaaatattcctgacccagccttggggtccttaaccagctctccggctccttc--cacctcagggccctcttagggttgcctcttgcattctttccaggg------------cttagcagacaggaacagggagggtcgggtttaggccatcttacccagaccgcaagtctctGAGTGTTTGATTG----TTTGTTTGAA-GAAAGTGATGAATGCAGGACCTCGAGCCA-GGAGGATTTTTCCCGGTGAAAAGCGGAGGGATTGACTCACGCTGG-GTTCTGAGTTCCAGGCCCGACTCCAGGGCTC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3661632 441 - 94967081 Gcctggtgtgttggggcgacttgcctttaatctaggagagaaaggagcctacttggactgccttctcttgctagtttgggagttgggaaatgcatgcctggg--tgggtcttgtattgggtgggggtg-aggggtgtcataatgccctgttgctaaatattcctgagccagccttggggaccttaaccagctcgccttctccttc--cacctcagggccctcttatggttgcctcttgcattctttccaggg------------cttagcagacaggaacagggagggtcgggtttaggccatcttacccagactggaagtctctAAGTGTTTGATTGAGTGTTTGTGTGAAGGAAAGTGATGAACCCAGGACCTCGAGCCA-GGAAGATTTTTCCTGGTGAAAAGCGGAAGAATTGACTCATGCTGG-GTTCTGAGTTCCAGGCCCGACTCCAGGGCTC i nomLeu3.chr14 C 0 I 1 s rheMac3.chr16 74829273 434 + 80904711 gcctagtgcgttggggcgacttgcctttaatctaggagagaaaggaggctgcttgggctgccttctgttgctaggttgggacttgggaaatgcatgcctggg--tgggtcctgtattgggtgggggtg-aggggtgtcatgatgccctgctgctaaacgttcctgagccagccttggggtccttaaccagcgatccttctccttc--cacctcggggccctcttgtggttgcctcttgcat-------aggg------------cttagcagacaggaacagggagggccgggtttgggccatcttacccagactgaaagtctctAAGTGGTTGATTGAGTGTTTGTTTGAAGGAAAGTGATGAACCCAGGACCTTGAGCCA-GGAAGACTTTTCTGGGTGAAAAGCGGAGGAATTGACTCATGCTGG-GTTCCGAGTTCCAGGCCCAACTCCAGGGCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74637661 434 + 80997621 gcctagtgcgttggggcgacttgcctttaatctaggagagaaaggaggctgcttgggctgccttctgttgctaggttgggacttgggaaatgcatgcctggg--tgggtcctgtattgggtgggggtg-aggggtgtcatgatgccctgctgctaaacgttcctgagccagccttggggtccttaaccagcgatccttctccttc--cacctcggggccctcttgtggttgcctcttgcat-------aggg------------cttagcagacaggaacagggagggccgggtttgggccatcttacccagactgaaagtctctAAGTGGTTGATTGAGTGTTTGTTTGAAGGAAAGTGATGAACCCAGGACCTTGAGCCA-GGAAGACTTTTCTGGGTGAAAAGCGGAGGAATTGACTCATGTTGG-GTTCCGAGTTCCAGGCCCAACTCCAGGGCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68645362 434 + 74645514 GCCTAGTGCATTGGGGCGACTTGCCTTTAATCTAGGAGAGAAAGGAGCCTGCTTGGGCTGCCTTCTGTTGCTAGGTTGGGACTTGGGAAATGCATGCCTGGG--TGGGTCCTGTAttgggtgggggtg-aggggtgtcATGATGCCCTGCTGCTAAATGTTCCTGAGCCAGCCTTGGGGTCCTTAACCAGCgatccttctccttc--cctctcggGGCCCTGTTGTGGTTGCCTCTTGCAT-------AGGG------------CTTAGCAGACAGGAACAGGGAGGGTCGGGTTTAGGCCATCTTACCCAGACTGAAAGTCTCTAAGTGTTTGATTGAGTGTTTGTTTGAAGGAAAGTGATGAACCCAGGACCTTGAGCCA-GGAAGACTTTTCCGGGTGAAAAGCGGAGGAATTGACTCATTCTGG-GTTCCGAGTTCCAGGCCCAACTCCAGGGCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30698778 434 - 75148670 gcctagtgcgttggggcgacttgcctttaatctaggagagaaaggagcctgcttgggctgccttctgttgctaggttgggacttgggaaatgcatgcctggg--tgggtcctgtattgggtgggggtg-aggggtgtcataatgccctactgctaaacgttcctgagccagccttggggtccttaaccagcgatccttctccttc--cacctcggggccctcttgtggttgcctcttgcat-------aggg------------cttagtagacaggaacagggagggtccggtttgggccatcttacccaaactgaaagtctctAAGTGTTTGATTGAGTGTTTGTTTGAAGGAAAGTGATGAACCCAGGACCTTGAGCCA-GGAAGACTTTTCCGGGTGAAAAGCGGAGGAATTGACTCATGCTGG-GTTCCGAGTTCCAGGCCCAACTCCAGGGCTC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57413504 445 - 61074082 gcctggtgttctggga-gcctctcgctcggtccaggagagaac-gagccaacttgg-ctgccttctg-tgcggggtggaggcttgggaagtatgtgccctggtctggggcatgggatg---gggggtgcaggggggccacaataccttgcggtgaattgttcctgac----tcttggggtcc-caaccggttcgcctcctccctctgctcttcaggatcccctttgggttgtctcttgcat-cattccggggtgtgtagccgtacttagcagagagggccgggaggagacgagtctacacagtcttgtccagactggaagtcCCTGCATATGTGACGGAGTGTCTGTTTGAAGGAAGGCGGTGGACGCAGGACCCTGGGCCAGGGAAGACCTTGCTCTGTGAAAAGCAGAGTAAGCGCCTGGTGCTGGAGCCCTGAGCTCCGGGCTGGACGGCAGGGC-- i canFam3.chr9 I 3198 C 0 e calJac3.chr5 126521920 0 + 159171411 C e panTro4.chr17 76231564 4320 + 82630442 I a score=1271817.000000 s hg38.chr17_GL383566v1_alt 44964 539 + 90219 ACCAGCTTCTTCCACAACCCGCACAACTTGAACGCTTGGTAGCATCTCCACGCAGCAGTGGGCACCCTGGCTTCTGGAGGAGCCCAGGCTGCATTTACCCCTCCATGGTGCATCTCATAGGATCAACTGGACCCGCGAAAGGCACTGG-CTGCGGAAAAGCAGCCAACTGCTCCCCAGCGAAGGGGATGGCCGGAAGCGAGGAGAGGGAGAAGCCCCAGCAGAGACCCCAGGAGGAAAAGACCCCACAACGGGGCCA--------------------------------CT-GGGAACCCATGATGTTGGTTACCAATGTGATTGGAGGTTCGGAACGACGGACGTGTGGCCCTGAAGTGGGAAACAGAAAAGCTGAAGGGCGAGACCTGGGAGGGAGCCCCCCACCCCCGCGGACTCCAGAGACCCAACCTTCCTTCCCTGCGCTCCGGCCGGACGTTCTCCCTGCCCCTGTGGCCGAGCCTGGTAAGTTCGCAGCAAACAGGAGTTTGGGGCTTTACAAGCCTCCAGAGGGGTCCATGGGCATTTGGGTAGATTGTTATACTGCCCCTGGC s panTro4.chr17 76235884 539 + 82630442 ACCAGCTTCTTCCACAACCCGCACAACTGNAACGCTTGGTAGCATCTCCACGCAGCAGTGGGCACCCTGGCTTCTGAAGGAGCCCAGGCTGCATTTGCCCCTCCATGGTGCATCTCATAGGATCAACTGGACCCGTGAAAGGCACTGG-CTGCGGAAAAGCAGCCAACTGCTCCCCAGCGAAGGGGATGGCCGGAAGCGAGGAGAGGGAGAAGCCCCAGCAGAGACCCCAGGAGGAAAAGACCCCACAACGGGGCCA--------------------------------CT-GGGAACCCATGATGTTGGTTACCAATGTGATTGGAGGTTCAGAACGACGGGCGTGTGGCCCTGGAGTGGGAAACAGAAAAGCTGAAGGGCGAGACCTGGGAGGTAGCCCCCCACCCCCGTGGACTCCAGAGACCCAACCTTCCTTCCCTGCGTTCCAGCCGGACGTTCTCCCTGCCCCTGTGGCCGAGCCTGGTAAGTTCGCAGCAAACAGGAGTTGGGGGCTTTACAAGCCTCCAGAGGGGTCCATGGGCATTTGGGTAGATTGTTATACTGCTCCTGGC i panTro4.chr17 I 4320 C 0 s ponAbe2.chr17 67335876 537 + 73212453 ACCAGCTTCTTCCACAACCCATACAACTTGAACGCTTGGTAGCATCTCCATGCAGCAGTGGGCACCCTGGATCCTGGAGGAGCCCAGGCTGCATTTGCCCCTCCATGGTGCATCTCGTAGGATCAACTGGACCCGTGAAAGGCACTGG-CTGCGGAAAAGCAGCCAACTGCTCCCCAGCGAAGGGGATGGCCGGAAGCGAGGAGAGGGAGAAGCTCCAGCAGAGACCCCAGGAGGAAAAGACCCCACAATGGGGCCA--------------------------------CT-GGGAACCCATGATGATGGTTACCAATGTGATTGGGGGTTCAGAACGACGGACGTGTGGCCCTGGAGTGGGAAACAGAAAAGCTGAAGGGCGAGACCTAGGAGGTGGCCCCTCACCCCTGTGGACTCCGAAGACCCAACCTTCCTTCCCTGCGCTCCAGCCAGACATTCTCCCTGCCCCTGTGGCCGAGCCTGGTAAGTTCGCAGCAAACAGGG--TGGGTGCTTTACAAGCCTCCAGAGGGGTCCATGGGTATTTGGGTAGATTGTTATCCTGCCCCTGGC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3662074 536 - 94967081 TCCAGCTGCTTCTACAACCCGCATGACTTGAACGCTTGGTAGCATCTCCATGCAGCAGTGGGCACCCCGGATTCTGGAGGAGCCCAGGCTGCATTTGCCCCCCCATGGTGCATCTCGTAGGATCTACTGGACCCGTGAAAGGCACTGG-CTGGGGAAAAGCAGCCAACTGCTCCCCAGCGAAGGGGATGGCCAGGAGCAAGGAGAGGGAGAAGCCCCAGCAGAGACCCCCGGAGGAAAAGACCCCACAACGGGGCCA--------------------------------CT-GGGGACCCATGA---TGGTTACCAGTGTGGTTGGGGGTTCAGAACGATGGACGTGTGGCCCTGGAGCGGGAAACAGAAAAGCTGAAGGGCGAGACCTGGGAGGTAGCCCCCCACCCCCGTGCACTCCGGAGCCCCAATCTTCCTTCCCTGCGCTCCAGCCGGCCGTTCTCCCGGCTCCTGCGGCCGAGCCTGGTAAGTTCGCAGCAAACAGGAGTTGGGGGCTTTACAAGCCTCCAAAGGGGTCCATGGGCATTTGGGTAGATTGTTATCCTGCCCCTGGC i nomLeu3.chr14 I 1 C 0 s rheMac3.chr16 74829707 569 + 80904711 GCCAGTTTCTTCCACAACCCGCACGACTTGAACGCTTGGTAGCATCTCCGCACAGCGGTGGGCGCCCTGGATTCTGGAGGAGCCCAGGCTGCATTTGCCCCTCCATGATTCATCTCATAGGACCAACTGGGCCTGTGAAAGGCACTGG-CTGGGGAAAAGCAGCCAACTGCTCCCCAGTGAAGGGGATGGCCAGAAGCGAGGAGAGGGAGAAGCCCCAGCAGAGACCGCTGG-GGAAAAGATCCCACAATGGGGCCAGCGAGGAGAGGGAGAAGCCCCAGCAGAGGCCGCT-GGGAACCCATGATGATGGTTACCAATATGACTGGGGGTTCAGAACGACGGACGAGTGGCCCTGGAGTGGGAAACAGAAAAGCTGAAGGGTGAGACCTGGGAGGTAGCCCCCCACGCCCGTGGACTCCGGAGACCCAACCTTCCTTCCCTGCGCTCCAGCCGCACATTCCCCCTGCCCCCGTGGCTGAGCCTGGTAAGTTCGCAGCAAACAGGGG-TGGGGTCTTTACAAGCCTGCAGAGGGGTCCACGGGCATTTGGGTAGATCGTTATCCTGCCCCTGGC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74638095 537 + 80997621 GCCAGTTTCTTCCACAACCCGCACGACTTGAACGCTTGGTAGCATCTCCGCACAGCGGTGGGCGCCCTGGATTCTGGAGGAGCCCAGGCTGCATTTGCCCCTCCATGATTCATCTCATAGGATCAACTGGGCCTGTGAAAGGCACTGG-CTGGGGAAAAGCAGCCAACTGCTCCCCAGTGAAGGGGATGGCCAGAAGCGAGGAGAGGGAGAAGCCCCAGCAGAGACCACTGG-GGAAAAGATCCCACAATGGGGCCA--------------------------------CT-GGGAACCCATGATGATGGTTACCAATATGACTGGGGGTTCAGAACGACGGACGAGTGGCCCTGGAGTGGGAAACAGAAAAGCTGAAGGGTGAGACCTGGGAGGTAGCCCCCCACGCCCGTGGACTCCGGAGACCCAACCTTCCTTCCCTGCGCTCCAGCCGCACATTCCCCCTGCCCCCGTGGCTGAGCCTGGTAAGTTCGCAGCAAACAGGGG-TGGGGTCTTTACAAGCCTGCAGAGGGGTCCACGGGCATTTGGGTAGATCGTTATCCTGCCCCTGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68645796 538 + 74645514 GCCAGCTTCTTCCACAATCCGCACAACTTGAACGCTTGGTAGCATCTCGGCACAGCGGTGGGCGCCCTGGATTCTGAAGGAGCCCAGGCTGCATTTGCCCCTCCATGATTCATCTCATAGGATCAACTGGGCCTGTGAAAGGCACTGG-CTGGGGAAAAGCAGCCAACTGCTCCCCAGTGAAGGGGATGGCCAGAAGCGAGGAGAGGGAGAAGCCCCAGCAGAGACCGCTGG-GGAAAAGATCCCACAATGGGGCCA--------------------------------CTGGGGAACCCATGATGATGGTTACCAATATGACTGGGGGTTCAGAACGACGGACGAGTGGCCCTGGAGTGGGAAACAGAAAAGCTGAAGGGCGAGACCTGGGAGGTAGccccccacccccGTGGACTCCGGAGACCCAACCTTCCTTCCCTGCGCTCCAGCCGCACGTTCCCCCTGCCCCCGTGGCTGAGCCTGGTAAGTTTGCAGCAAACAGGGG-TGGGGTCTTTACAAGCCTCCAGAGGGGTCCACGGGCATTTGGGTAGATTGTTATCCTGCCCCTGGC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30699212 533 - 75148670 GCCAGCTTCTTCCACAACCCGCACAGCTTGAACGCTTGGTAGCATCTCCGCACAGCAGTGGGCGCCTTGAATTCTGGAGGAGCCCAGGCTGCATTTGCCCCTCCATG----ATCTCATAGGATCAACTGGGCCTGTGAAAGGCACTGG-CTGGGGAAAAGCAGCCAACTGCTCCCCAGTGAAGGGGATGGCCAGAAGCGAGAAAAGGGAGAAGCCCCAGCAGAGACCGCTGG-GGAAAAGATCCCACAATGGGGCCA--------------------------------CT-GGGAACCCATGATGATGGTTGCCAATATGACTGGGAGTTCAGAACAACGGACGAGTGGCCCTGGAGTAGGAAACAGAAAAGCTGAAGGGCGAGACCTGGGAGGTAGCCCCCCACCCCCGTGGACTCCAGAGACCCAACCTTCTTTCCCTGCGCTCCAGCCGCACGTTCCCCCTGCCCCGGTGGCTGAGCCTGGTAAGTTTGCAGCAAACAGGGG-TGGGGTCTTTACAAGCCTCCAGAGGGGTCCACGGGCATTTGGGAAGATTGTTGTCCTGCCCCTGGC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57413949 394 - 61074082 --CAGCCTCTGTCACAGCCCCCA--GCCGGGCTGCCAGG-AGCGGCTACAC-CGGCC----CCGCCACGGCGTCCGAGGGAGCGCTG--CGCATCTGCCCT------------------------------CCGCTGAGAGCTGCTGGCCTGGGGACAGACGGCCACCCGCGGCCCAGCTACGGGGC---CTAGA----CGGACCGGGAGAGGCCCCAGCAGGCACGCCTGG-AAAACAggccccgcggcggggcca--------------------------------cg-gccgcccccAGCTGACGGTCGCCA--------------TGGGATGGAGGGGTGTGTA-----GGGGTGGG----------------------------TGTGCCAGCCTCTCG------------ACGGAAGC-------TCCTTCCTCCCGC-CCAGACGGCCACTCCCTGCTGCCCCGGGGCCCAGCCTGGTGACC-----------------TGGGGGCCGCGCA--CCTCCGGAGGGCTC--TGGACGTCCTGGGCCGGTGT-------CCCCTGG- i canFam3.chr9 C 0 C 0 e calJac3.chr5 126521920 0 + 159171411 C a score=588031.000000 s hg38.chr17_GL383566v1_alt 45503 200 + 90219 AGGAGGGCAAGGCCCTTCATGGGAGCCATAAGCTGGAGACCTAACAGAGCTCGCAGCTCGGCCACAGGGCTCTGTTCCAGGGGCATTGGCCACTGGCTTCCAGTACCTGTTCAGCCTCCCAGCTCCTTGTTGCCTGGAATCTCCACCACTGATCAGCGTG-TAAACACCTATGTGGGGGACACGGGGGCAGGGGGGTCCAG s panTro4.chr17 76236423 200 + 82630442 AGGAGGGCAAGGCCCTTCATGGGAGCCATAAGCTGGAGACCTAACAGAGCTCGCAGCTCGGCCACAGGGCTCTGTTCCAGGGGCATCGGCCACTGGCTTCCAGTACCTGTTCAGCCTCCCAGCTCCTTGTTGCCTGGAATCTCCGCCACTGATCAGCGTG-TAAACACCTATGTGGGGGACACGGGGGCAGGGGGGTCCAG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67336413 198 + 73212453 AGGAGGGCAAGGCCCTTCTTGGGAGCCATAAGCTGGAGAACTAAC--AGCTCGCAGCTCGGCCACAGGCCTCTGTTCCAGGGGGATCGGCCACTGGCTTCCAGAACCTGTTCAGCCTCCCAGCTCCTTGTTGCCTGGAATCTCCGCCACTGATCAGCGTG-TAAACACCTATGTGGGGGACACGGGGGCAGGGAGGTCCAG i ponAbe2.chr17 C 0 M 927 s nomLeu3.chr14 3662610 200 - 94967081 AGGAGGGCAAGGCCCTTCACGGGAGCCATAAGCTGGAGACCTAACAGAGCTCGCAGCTCGGCCACAGGCCTCTGTTCCAGGGGGATCGGCCACTGGCTTCCAGAAGCTGTTCAGCCTCCCAGCTCCTTGTTGCCTGGAAGCTCCACCACTGATCAGCATG-TAAACACCTATGTGGGGGACACGGGGACACAGGGGTCCAG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74830276 199 + 80904711 AGGAGGGCAAGGCCCTTCATGGTAGCCATAAGCTGGAGACCTAAGAGAGCTCACAGCTCGGCCACAGGCCTCTGTTCCGGGGGGATCGGCTGCTGGCTTCCAGCACCTGTTCAGCCTCCCAGCTCCTTGTTACCTGGAATCTCCGTCACTGATCAGTGTG-TAAACACCTATGTGGGTGACATGGGGGCA-GGGGGTCCAG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74638632 199 + 80997621 AGGAGGGCAAGGCCCTTCATGGTAGCCATAAGCTGGAGACCTAAGAGAGCTCACAGCTCGGCCACAGGCCTCTGTTCCGGGGGGATGGGCTGCTGGCTTCCAGCACCTGTTCAGCCTCCCAGCTCCTTGTTACCTGGAATCTCCGTCACTGATCAGTGTG-TAAACACCTATGTGGGTGACATGGGGGCA-GGGGGTCCAG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68646334 199 + 74645514 AGGAGGGCAAGGCCCTTTATGGGAGCCATAAGCTGGAGACCTAAGAGAGCTCACAGCTCGGCCACAGGCCTCTGTTCTGGGGGGATCGGCCGCTGGCTTCCAGCACCTGTTCAGCCTCCCAGCTCCTTGTTGCCTGGAATCTCCGCCACTGATCAGTGTG-TAAACACCTATGTGGGGGACACGGGGGCA-GGGGGTCCAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30699745 199 - 75148670 AGGAGGGCAAGGCCCTTCATGGGAGCCATAAGCTGGAGACCTGAGAGAGCTCACAGCTCAGCCACAGGCCTCTGTTCCCGAGGGATCAGCCGCTGGCTTCCAGCACCTGTTCAGCCTCCCAGCTCCTTGTTGCCTGGAATCTTCGCCACTGATCAGTGTG-TAAACACCTATGTGGGGGACATGGGGGCA-GGGGGTCCAG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126521920 195 + 159171411 AGGATGGCAAAGCTCTTCATGGGAGCCAT-AGCTGGAGACCTAACAGAGCTGGCAGCT-GGCCA-AGGCCTCTGCTCCAGGGGG-TCAGCTGCGGGCTTCCAGAACCTGTTCAGCCTCTGAGTTCCATGTTGCCTGGAACCTCCACCACTGATCAGCGTG-TCAACACCTATGTGGGGGATGTGGGGGCG-GGGGTTCCAG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57414343 150 - 61074082 ------------------------GCCGTAAGCTTGAGGCCCGGA--CATTCGGAGCT------CTGGTCCCGGCTCCGGAGGAGATGGCTGCTGTCTTCCAGAACCCGGCAGGCCCCC--GCTCCTCG-----------CCCCACCCCCGACCTGCGTGTTAAGCACCTGGACGGGGCCCCCGGG-----CGGCTCCCA- i canFam3.chr9 C 0 C 0 a score=2002420.000000 s hg38.chr17_GL383566v1_alt 45703 900 + 90219 GAAGGCAACTTTTGGGGGAT-AGGGTGGGAAGAAAGAGGGACC-----TCAGAGGCCAGTTCTT-CCCCATCCTACTCTATTTCCTCCTGTAACCATGGGAAATGTCTTTCTGTGCCCGATCCTGT------------ATGGGGTGCGGATGGGGCACACAGATGAATCAGACCCGGCCCCCTCTTTGTGCCAATTCATAAGCACTTCATCCACGGCTCAGCCCTGTGAAAGAGCTCCTCGGG-CCCAGGAATGCAATACAGTGAGAACACTTTCCGGTCTTGCCTCCAGGTGACGATTCAGCACACAGGAAGGTGGCCCTGCCCAGGGCCAAGCTCTCTCTCAGTTGGCACCTGGCCAGG-TGAGGGGGCTGCTCCCTGTCACAGAATAGGAAGCTGAGGCCCGTGGGGCCTCATAGGCACACAGCATGGGGCGGCAGACTGGGCCTCCTGACCGTCAGCGCTGTGAGGCCGATCTTCTTGCCCACTGCGGA-GGCTCAGCCCCTCCCCTGCCCTCCAGGCCTGTCCTGCAAC------CACTCCACCTCTGCTGCTGGGGCCTGTGTGTGTCCCCCAGCTCCTCCTGCTGGGGCCTGTCTGTGGCTCCTGGAAGGTGTGACCCGGGTCACCTGTGGGCAGAGGCCTCACTCACACCCCCGGCCTCTCATGTTGCCATCCAGCTCTGTCCTGCTCTCCCTCCCCCAGTGGGGGTTTAAGCTCCTCGTGGGCTGCCT-CCCCGACCCCGGCGCCCTCTGTCTCCACGGAAGCCTGTCATTTCCGAGGCCTGAGTCACC----ACTGGCTGGTTGCAGCCGGGTCAGCGTGCCACCCGGCACGAGGCA-------------CAGACATGAGCTACTGGGTCCTGCACCCTGTG-GTTAGGAGCTCAGAGGCCTCTTTCTAGGGGACGTTGCCAGTGAATAAGTCTTTC s panTro4.chr17 76236623 900 + 82630442 GAAGGCAACTTTTGGGGGAT-AGGGTGGGAAGAAAGAGGGACC-----TCAGAGGCCGGTTCTT-CCCCATCCTACTCTATTTCCTCCTGTAACCATGGGAAATGTCTTTCTGTGCCCGATCCTGT------------ATGGGGTGCAGATGGGGCACACAGATGAATCAGACCCGGCCCCCTCTTTGTGCCAATTCATAAGCACTTCATCCACGGCTCAGCCCCATGAAAGAGCTCCTCGGG-CCCAGGAATGCAATACAGTGAGAACACTTTCCAGTCCTGCCTCCAGGTGACGATTCAGCACACAGGAAGGTGGCCCTGCCCAGGGCCAAGCTCTCTCTCAGTTGGCACTTGGCCAGG-TGAGGGGGCTGCTCCCTGTCACAGAATAGGAAGCTGAGGCCCGTGGGGCCTCATAGGCACACAGCATGGGGCGGCAGACTGGGCCTCCTGACCGTCAGCGCTGTGAGGCCGATCTTCTTGCCCACTGCGGA-GGCTCAGCCCCTCCCCTGCCCTCCAGGCCTGTCCTGCAAC------CACTCCACCTCTCCTGCTGGGGCCTGTGTGTGTCCCCCAGCTCCTCCTGCTGGGGCCTGTCTGTGGCTCCTGGAAGGTGTGACCCGGGTCACCTGTGGGCAGAGGCCTCACTCGCACCCCCGGCCTCTCATGTTGCCATCCAGCAATGTCGTGCTCTCCCTCCCCCAGTGGGGGTTTAAGCTCCTCGTGGGCTGCCT-CCCCGACCTCGGTGCCCTCTGTCTCCACGGAAGCCTGTCATTTCCAAGGCCTGAGTCACC----ACTGGCTGGTTGCAGCCGGGTCAGCGTGCCACCCGGCACGAGGCA-------------CAGACATGAGCTACTGGGTCCTGCACCCTGTG-GTTAGGAGCTCAGAGGCCTCTTTCTAGGGGACGTTGCCAGTGAATAAGTCTTTC i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3662810 902 - 94967081 GAAGGCAACGTTTGGGGGAT-AGACTGGGAAGAAAGAGGGACC-----TCAGAAGCCAGTTCTT-CCCCATCCTACTCTATTTCCTCCTGTAAGCATGGAAAGTGTCTTTCTGTGCCCGATCCTGT------------ATGGGGTGCGGATGGGGCACACAGATGAATCAGACCCGGCCCCCTCTTTGTGCCAGTTCATAAGCACTTCATCCACGGCTCAGCCCTGTGAAAGAGCTCCTCGGGCCCCAGGAATGCAATACAGTGAGAACACTTTCCAGTCCTGCCTCCAGGTGACAATTCAGCACACAGGAAGGTGGCCCTGCACAGGGCCAAGCTCTCTCTCAGTTGGCACCTGGCCAGG-TGAGGGGGCTGCTCCCTGTCACAGAATAGGAAGCTGAGGCCCGTGGGGCCTCACAGGCACACAGCATGGGGCGGCAGACCAGGCCTCCTGACCGTCAGTGCTGCCAGGCTAATCTTCTTGCCCAGTGCAGAGGGCTCAGCCCCTCCCCTGCCCTCCAGGCCTGTCCTGCAAC------CACTCCACCTCTCCTGCTGTGGCCTGTGTGTGTCCCCCAGCTCCTCCTGCTGGGGCCTGTCTGTGGCTCCTGGAAGGTGTGACCCGGGTCACCTGTGGGCAGAGGCCTCACTCCCACCCCCAGCCTCTCATGTTGCCATCCAGTTCTGTCCTGCTCTCCCTCCCCCAGTGGGGGTTTAAGCTCCTCGTGGGCTGCCT-CCCCGACCCCGGCGCCCTCTGTCTCCACGGAAGCCTGTCATTTCCGAGGCCTGAGTCACC----ACTGGCTGGTTGCAGCCGGGTCAGCGTGCCACCCGGCACGAGGCA-------------CAGACATGAGCTACTGGGTCCTGCACCCTGTG-GTTAGGAGCTCAGAGGCTTCTTTCTAGGGGACGTTGCCAGTGAATAAGTCTTTC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74830475 899 + 80904711 GAAGGCAACTTTTGGGGGAT-AGAGTGGAAAGAAAGAGGGACC-----TCAGAGGCCAATTCTT-CCCCATCCTACTCTGTTTCCTCCCGTAAGCGTGGGAAATGTCTTTCTGTGCCCGATCCTGT------------GTGGGGTGCGAATGGGGCACACGGATGAATCAGGCCCGGCCCCCTCTTTGTGCCAATTCATAAGCACTTAATCCACGGCTCAGCCCTGTG--AGAGCTCCGCGGG-CCCAGGAATGCAATACAGTGAGAACACTCTCCAGTCCTGCCTCCAGGTAATGATTTGTCACACAGGAAGGTGGCCCTGCACAGGGCCAAGCTCTCTCTCAGTTGGCACCTGGCCAGG-TAAGAGGGCTGCTCCCTGTCACAG--TAGGAAGCTGAGGCCCGTGGGGCCTCATAGGCGCACAGCATGGGGTAGCAGACCAGGCCTCCTGACCGTCAGCGCTGCCAGGCCAATCTTCTTGCCCACTGCGGA-GGCTCAGCCCCTCCCCTGCCCTCCAGGCCTGTCCTGCACC------CACTCCACCTCTCCTGCTGTGGCCTGTGTGTGTTCCCCAGCTCCTCCTGCTGGGGCCTGTCTGTGGCTCCCGGAAGGTGTGACCCTGGTCACCTGTGGGCAGAGGCCTCACTCCCACCCCCGGCCTCTCGCATTGCCATCCAGCTCTGTCCTGCTGTCCTTCCCCCAGTGGGGGTTTAGGCTCCTTGTGGGCTGCCT-CCCCGACCCCGGCGCCCTCTGTCTCCACGGAAGCCTGTCATTTCC-AATTCTGAGTCACCGCTGGCTGGCTGGCTGCAGCTGGGTCAACGTGCCACCCTGCACGAGGCA-------------CAGACATGAGCTCCTGGGTCCTGCACCCTGTG-GTTAGGAGCTCAGAGGCCTCTTTCTAGGGGACGTTGCCAGTGAATAAGTCTTTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74638831 899 + 80997621 GAAGGCAACTTTTGGGGGAT-AGAGTGGGAAGAAAGAGGGACC-----TCAGAGGCCAATTCTT-CCCCATCCTACTCTGTTTCCTCCCGTAAGCGTGGGAAATGTCTTTCTGTGCCCGATCCTGT------------GTGGGGTGCGAATGGGGCACACGGATGAATCAGGCCCGGCCCCCTCTTTGTGCCAATTCATAAGCACTTAATCCACGGCTCAGCCCTGTG--AGAGCTCCGCGGG-CCCAGGAATGCAATACAGTGAGAACACTCTCCAGTCCTGCCTCCAGGTAATGATTCGGCACACAGGAAGGTGGCCCTGCACAGGGCCAAGCTCTCTCTCAGTTGGCACCTGGCCAGG-TAAGAGGGCTGCTCCCTGTCACAG--TAGGAAGCTGAGGCCCGTGGGGCCTCATAGGCGCACAGCATGGGGTAGCAGACCAGGCCTCCTGACCGTCAGCGCTGCCAGGCCAATCTTCTTGCCCACTGCGGA-GGCTCAGCCCCTCCCCTGCCCTCCAGGCCTGTCCTGCACC------CACTCCACCTCTCCTGCTGTGGCCTGTGTATGTTCCCCAGCTCCTCCTGCTGGGGCCTGTCTGTGGCTCCCGGAAGGTGTGACCCTGGTCACCTGTGGGCAGAGGCCTCACTCCCACCCCCGGTCTCTCGCATTGCCATCCAGCTCTGTCCTGCTGTCCTTCCCCCAGTGGGGGTTTAGGCTCCTTGTGGGCTGCCT-CCCTGACCCTGGCGCCCTCTGTCTCCATGGAAGCCTGTCATTTCC-AATTCTGAGTCACCGCTGGCTGGCTGGCTGCAGCTGGGTCAACGTGCCACCCTGCACGAGGCA-------------CAGACATGAGCTCCTGGGTCCTGCACCCTGTG-GTTAGGAGCTCAGAGGCCTCTTTCTAGGGGACGTTGCCAGTGAATAAGTCTTTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68646533 900 + 74645514 GAAGGCAACTTTTGGGGGAT-AGAGTGGGAAGAAAGAGGGACC-----TCAGAGGCCAATTCTT-CCCCATCCTACTCTGTTTCCTCCCGTAAGCGTGGGAAATGTCTTTCTGTGCCCGATCCTGT------------GTGGGGTGCGAATGGGGCACACAGATGAATCAGGCCCGGCCCCCTCTTTGTGCCAATTCATAAGCACTTAATCCACGGCTCAGCCCTGTG--AGAGCTCTGCGGG-CCCAGGAATGCAATACAGTGAGAACACTCTCCAGTCCTGCCTCCAGGTAACGATTCAGCACACAGGAAGGTGGCCCTGCACAGGGCCAAGCTCTCTCTCAGTTGGCACCTGGCCAGG-TAAAAGGGCTGCTCCCTGTCACAG--TAGGAAGCTGAGGCCCGTGGGGCCTCATAGGCGCACAGCATGGGGTGGCGGACCAGGCCTCCTGACCGTCAGCGCTGCCAGGCCAATCTTCTTGCCCACTGTGGA-GGCtcagcccctcccctgccctccaggcCTGTCCTGCACC------CACTCCACCTCTCCTGCTGTGGCCTGTGTGTGttccccagctcctcctgctggGGCCTGTCTGTGGCTCCCGGAAGGTTTGACCCCGGTCACCTGTGGGCAGAGGCCTCACTCCCACCCCTGGCCTCTCACATTGCTATCCAGCTCTGTCCTGCTGTCCTTCCCCCAGTGGGGGTTTAGGCTCCTTGTGGGCTGCCT-CCCCGACCCCGGCGCCCTCTGTCTCCACGGAAGCCTGTCATTTCCGAGGCCTGAGTCACcgctggctggctggctgcagCTGGGTCAACGTGCCACCCTGCACGAGGCA-------------CAGACATGAGCTCCTGGGTCCTGCACCCTGTG-GTTAGGAGCTCAGAGGCCTCTTTCTAGGGGATGTTGCCAGTGAATAAGTCTTTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30699944 905 - 75148670 GAAGGCAACTTTTGGGGGAT-AAAGTGGGAAGAAAGAGGGACC-----TCAGAGGCCAATTCTT-CCCCATCCTACTCTGTTTCCTCCCGTAAGCGTGGCAAATGTCTTTCTGTGCCCGATCCTGT------------GTGGGGTGCGAATGGGGCACACGGATGAATCAGGCCCGGCCCCCTCTTTGTGCCAATTCATAAGCACTAAATCCACAGCTCAGCCCTGTG--AGAGCTCCGCGGG-CCCAGGAACGCAATACAGTGAGAACACTCTCCAGTCCTGCCTCCAGGTAACGATTCGGCACACAGGAAGGTGGCCCTGCACAGGGCCAAGCTCTCTCTCAGTTGGCACCTGGCCAGG-TAAGAGGGCTGCTCCCTGTCACAG--TAGGAAGCTGAGGCCCGTGGGACCTCATAGGCGCACAGCATGGGGTGGCGGACCAGGCCTCCTGACCGTCAGCACTGCCAGGCCAATCTTCTTGCCCACTGCGGA-GGCTCAGCCCCTCCCCTGCCCTCCAGGCCTGTCCTGCACCCTCTGTCACTCCACCTCTCCTGCTGTGGCCTGTGTGTGTTCCCCAGCTCCTCCTGCTGGGGCCTGTCTGTGGCTCCTGGAAGGTGTGACCCGGGTCACCTGTGGGCAGAGGCCTCACTCCCACCCC-GGCCTCTCGCATTGCCCTCCAGCTCTGTCCTGCGGTCCTTCCCCCAGTGGGGGTTTAGGCTCCTTGTGGGCTGCCT-CTCCGACCCCGGGGCCCTCTGTCTCCACGGAAGCCTGTCATTTCCGAGGCCTGAGTCACCGCTGGCTGGCTGGCTGCAGCTGGGTCAACGTGCCACCCTGCACGAGGCA-------------CAGACATGAGCTCCTGGGTCCTGCACCCTGTG-GTTAGGAGCTCAGAGGCCTCTTTCTAGGGGACGTTGCCAGTGAATAAGTCTTTC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126522115 742 + 159171411 GAAGGCGACTTTTGGGTGAT-AGGGCGGGAAGAAAGAGGGACC-----CCAGAGGCCAGTTGTTCCCCCATCCTAGTCTGTTTCCTCCCATAAGCATGGGAAGTGTCTTTCTGCACCCGATCCTGT------------GTGGGCAGCGGGTGGGGCACACAGATGAATCAGACCCGGCCCCCTCTTTGTGCCAACTCATAAGCACGTAATCCATGGCTCAG-CCTGTGAAAGAGCTCAGCGGG-CCCAGAAATGTAATGAAGTGAGAATACTTTCCAATCCTGTCTCCAGGTAATG-----------------------------------------------------------------------GGGCTGCTCCCCGTCACAGAATA----------------GGGGCCTCATAGGCACACAGCATGGGGTGGCAGGCCAGGCCTCCTGATGGTCAGCGCTGTGAGGCT-ATCTTCTCTCCCACTGCGGA-GGCCCAGCCTCTCCTGTGCCCTCTAGGCCTGTCCTATACC------CCCTCCACCT---------------------------------CTCCTGCTGGGGCCTGTCAGTGGCTCCTGGAAGGTGTGACCTGGGTCAGC---------------------CACCCCAGGCCTCTC-----------------CATCCTGCTCTCCTTCCCCCTATGGGGGTTTAGGCTCCTCCTGGGGTGCCC-ACCCGACCCCAGTGCCCTCCATCTCCATGAAAGCCTGTCATTTCTGAGGACTGAGTCACT----GCCGGCTGGCGGCAGCCCATTCAGCATGCCACTTGGCACGTGGCA-------------CAGACATGAGCTACTGGGTCCTGCACCCTGTG-GTTAGGAGTCCAAAGGCCTCTTTCCAGGCGACGTTGCCGGTTTATACGTCTTTC i calJac3.chr5 C 0 C 0 s canFam3.chr9 57414493 596 - 61074082 --GGGTGACGTTCCCGGGATGGGAGCAAGAAGAGAGGGAGACCGTCTGCAAGAGGCCAATTCTC-TTCCTTTCTATTCCATTTCTTTCCCTA------GAAAGTGCCTCTCTGTGCCCAGCTCTGTGCCGCGAGGAAGGCGGGAGTAGGATGGGGCGCGCAGGTGAGTCTG---CGGGCCCC------------------------------------------------GGACCCCGGCGCG---------------ACAG------------CAGGTCATGGACCCGGG------------------------GGGTTTGGACACGGCCCGTCTCACCGTCAGTCGGCGCCCAGCTGGGCCGGGAGGGCTGGTCCCTGT-------------------------GGTGCCCCGAGGG------------------------------------------------------------------------GA-GGC---ACCCC-------------------------CACC------CCCTCCGTGTCTCC-------------------------------CCCGCT-GGGCCCACCTGTGGCT------------------------------------------------CCCCAGGCCTCCGGCCCTG-TGGCCAGCTCTGCCCTGCTCCGCTTCCCTGAG-----------------CGTGGGCCGCCTCCCCCGACA--GGCACCCCCCCGTTCCCCGGAAGCCTGTCATTTCCGAGG-CTGAGTCACC----GCTGGCTGGCT--AGACCGGTCAGCACGCCGCCC-GCACGGGGCACCCGGTGGGCTCCCACGCCTGAGTTCCCTCACCCCCCGCCCCCCGCGTCAGGAGCCGCCGGGCTCCCCTCACTGGGTTCCAGCCTGTGCAAAGGGCTCTC i canFam3.chr9 C 0 I 300 e ponAbe2.chr17 67336611 927 + 73212453 M a score=355765.000000 s hg38.chr17_GL383566v1_alt 46603 146 + 90219 AGGGCAGAGGCAGGGTGGAGAAGAACCACTCCTCTATTCCCTTACCCTCCCACACCAGGAATCGCTGGGCTCCCTGTGACCAGGGACTTTCCCAGATGCCTGGGATTTTGGATGAAGCTGGAAAGCAGAGAATGCCCATGTGCCTA s panTro4.chr17 76237523 146 + 82630442 AGGGCAGAGGCAGGGTGGAGAAGAACCACTCCTCTATTCCCTCACCCTCCCACACCAGGAATCGCTGGGCTCCCTGTGACCAGGGACTTTCCCGGATGCCTGGGATTTTGGATGAAGCTGGAAAGCAGAGAATGCCCATGTGCCTA i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663712 146 - 94967081 AGGGCAGAGGCAGGGTGGAGAAGAACTCCTCCTCTATTCCCTCACCCTCCCACGCCAGGAATCGCTGGGCTCCCTGTGACCAGGGACTTTCCCAGATGCCTGGGATTTTGGATGAAGCTGGAAAGCAGAGAATGCCCATGTGCCTA i nomLeu3.chr14 C 0 T 14 s rheMac3.chr16 74831374 146 + 80904711 AGGGCAGAGGCAGGGTGGAGAAGAACCACTCCTCTATTCCCTCACCCTCCCACGCCAGGAATGGCTGGGCTCCCTGTGACCAGGGACTTTCCCGGATGCCTGGGACTTTGGATGAAGCTGGAAAGCAGAGAATGTTCATGTGCCTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639730 146 + 80997621 AGGGCAGAGGCAGGGTGGAGAAGAACCACTCCTCTATTCCCTCACCCTCCCACGCCAGGAATGGCTGGGCTCCCTGTGACCAGGGACTTTCCCGGATGCCTGGGACTTTGGATGAAGCTGGAAAGCAGAGAATGTTCATGTGCCTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647433 146 + 74645514 AGGGCAGAGGCAGGGTGGAGAAGAACCACTCCTCTATTCCCTTGCCCTCCCACGCCAGGAATGGCTGGGCTCCCTGTGACCAGGGACTTTCCCGGATGCCTGGGActttggatgaagctggaaagcagAGAATGTTCATGTGCCTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30700849 146 - 75148670 AGGGCAGAGGCAGGGTGGAGAAGAACCACTCCTCTATTCCCTCGCCCTCCCATGCCAGGAATGGCTGGGCTCCCTGTGACCAGGGACTTTCCCGGATGCCTGGGACTTTGGATGAAGCTGGAAAGCAGAGAATGTTCATGTGTCTA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126522857 146 + 159171411 AGCTCAGAGGCAGGGTGGAGAGGAACCACTCCTCTATCCCCTTGCCCTCCCATGCCAGGAACTGCTGGGCTCCCTGTGACCAGGGACTTTCCCAGATGCCTGGGATTTGTAATGAAGCCGGGAAGCAGAGAATATCCACGTGCGTG i calJac3.chr5 C 0 C 0 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M a score=50546.000000 s hg38.chr17_GL383566v1_alt 46749 32 + 90219 CTCAGTGCAGACAGGGTGCCCGACGTGCCTAC s panTro4.chr17 76237669 32 + 82630442 CTCAGTGCAGACAGGGTGCCCGACGTGTCTAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831520 32 + 80904711 CTCAGTGCAGACAGGGCGCCCGGCGTGCCTAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639876 32 + 80997621 CTCAGTGCAGACAGGGCGCCCGACGTGCCTAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647579 32 + 74645514 CTCAGTGCAGACAGCGCGCCCGGCATGCCTAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30700995 32 - 75148670 CTCAGTGCAGACAGCGTGCCCGGCGTGCCTAC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126523003 32 + 159171411 CTCAGTGCAGAGTTGGCACTGGACATGTCTAC i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3663858 14 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M a score=35053.000000 s hg38.chr17_GL383566v1_alt 46781 29 + 90219 TCAGTGCAGACACGGTGCCCGACGTGCCT s panTro4.chr17 76237701 29 + 82630442 TCAGTGCAGACATGGTGCCCGACGTGCCT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831552 29 + 80904711 TCAGTGCAGACAGCGTGCCCGGCGTGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639908 29 + 80997621 TCAGTGCAGACAGGGCGCCCGACGTGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647611 29 + 74645514 TCAGTGCAGACAGCGTGCCTGATGTGTCT i papAnu2.chr16 C 0 T 70 s chlSab2.chr16 30701027 29 - 75148670 TCAGTGCAGACAGCGTGCCCGACGTGCCT i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663858 14 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=13632.000000 s hg38.chr17_GL383566v1_alt 46810 17 + 90219 ACTCAGTGCAGACACGG s panTro4.chr17 76237730 17 + 82630442 ACTCAGTGCAGACAGGG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831581 17 + 80904711 ACTCAGTGCAGGCAGCG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639937 17 + 80997621 ACTCAGTGCAGACAGCG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30701056 17 - 75148670 ACTCAGTGCAGACAGGG i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663858 14 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C e papAnu2.chr16 68647640 70 + 74645514 T a score=4765.000000 s hg38.chr17_GL383566v1_alt 46827 6 + 90219 TGCCCG s panTro4.chr17 76237747 6 + 82630442 TGCCCG i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663844 5 - 94967081 TGCCC- i nomLeu3.chr14 T 14 C 0 s rheMac3.chr16 74831598 6 + 80904711 TGCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639954 6 + 80997621 TGCCTG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30701073 6 - 75148670 TGCCCA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C e papAnu2.chr16 68647640 70 + 74645514 T a score=13116.000000 s hg38.chr17_GL383566v1_alt 46833 8 + 90219 ACGTGCCT s panTro4.chr17 76237753 8 + 82630442 ACGTGCCT i panTro4.chr17 C 0 I 31 s nomLeu3.chr14 3663849 8 - 94967081 ATGTGCCT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74831604 8 + 80904711 ACGTGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639960 8 + 80997621 ATGTGTCT i macFas5.chr16 C 0 T 93 s papAnu2.chr16 68647570 8 + 74645514 ATGTGCCT i papAnu2.chr16 T 70 C 0 s chlSab2.chr16 30701079 8 - 75148670 GCGTGCCT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=1179.000000 s hg38.chr17_GL383566v1_alt 46841 1 + 90219 A s panTro4.chr17 76237792 1 + 82630442 G i panTro4.chr17 I 31 C 0 s nomLeu3.chr14 3663857 1 - 94967081 A i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74831612 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639875 1 + 80997621 A i macFas5.chr16 T 93 C 0 s papAnu2.chr16 68647578 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701087 1 - 75148670 A i chlSab2.chr16 C 0 T 93 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=52159.000000 s hg38.chr17_GL383566v1_alt 46842 30 + 90219 CTCAGTGCAGACAGGGTGCCCGACGTGCCT s panTro4.chr17 76237793 30 + 82630442 CTCAGTGCAGACAGGGTGCCCGACTTGTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663858 30 - 94967081 CTCAGTGCAGACAGGGTGCCTGACGTGTCT i nomLeu3.chr14 C 0 T 48 s rheMac3.chr16 74831613 30 + 80904711 CTCAGTGCAGACAGGGCGCCCGACGTGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639876 30 + 80997621 CTCAGTGCAGACAGGGCGCCCGACGTGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647579 30 + 74645514 CTCAGTGCAGACAGCGCGCCCGGCATGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30700995 30 - 75148670 CTCAGTGCAGACAGCGTGCCCGGCGTGCCT i chlSab2.chr16 T 93 C 0 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=38290.000000 s hg38.chr17_GL383566v1_alt 46872 31 + 90219 GCTCAGTGCAGACAGGGTGCCCGACGTGCCT s panTro4.chr17 76237823 31 + 82630442 GCTCAGTGCAGACAGGGTGCCCGACGTGTCT i panTro4.chr17 C 0 T 93 s rheMac3.chr16 74831643 31 + 80904711 ACTCAGTGCAGACAGAGTGCCCGGCGTGCCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639906 31 + 80997621 ACTCAGTGCAGACAGGGCGCCCGACGTGCCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647609 31 + 74645514 ACTCAGTGCAGACAGCGTGCCTGATGTGTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701025 31 - 75148670 ACTCAGTGCAGACAGCGTGCCCGACGTGCCT i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663888 48 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=294.000000 s hg38.chr17_GL383566v1_alt 46903 1 + 90219 G s panTro4.chr17 76237761 1 + 82630442 G i panTro4.chr17 T 93 C 0 s rheMac3.chr16 74831674 1 + 80904711 A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639937 1 + 80997621 A i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647640 1 + 74645514 G i papAnu2.chr16 C 0 T 71 s chlSab2.chr16 30701056 1 - 75148670 A i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663888 48 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=18701.000000 s hg38.chr17_GL383566v1_alt 46904 22 + 90219 CTCAGTGCAGACAGGGTGCCCG s panTro4.chr17 76237762 22 + 82630442 CTCAGTGCAGACAGGGTGCCCG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831675 22 + 80904711 CTCAGTGCAGACAGCGTGCCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639938 22 + 80997621 CTCAGTGCAGACAGCGTGCCTG i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30701057 22 - 75148670 CTCAGTGCAGACAGGGTGCCCA i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663888 48 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C e papAnu2.chr16 68647641 71 + 74645514 T a score=8722.000000 s hg38.chr17_GL383566v1_alt 46926 8 + 90219 ACGTGCCT s panTro4.chr17 76237784 8 + 82630442 ACGTGCCT i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831697 8 + 80904711 ATGTGTCT i rheMac3.chr16 C 0 T 62 s macFas5.chr16 74639960 8 + 80997621 ATGTGTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647570 8 + 74645514 ATGTGCCT i papAnu2.chr16 T 71 C 0 s chlSab2.chr16 30701079 8 - 75148670 GCGTGCCT i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663888 48 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=294.000000 s hg38.chr17_GL383566v1_alt 46934 1 + 90219 G s panTro4.chr17 76237792 1 + 82630442 G i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831643 1 + 80904711 A i rheMac3.chr16 T 62 C 0 s macFas5.chr16 74639968 1 + 80997621 G i macFas5.chr16 C 0 T 62 s papAnu2.chr16 68647578 1 + 74645514 A i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701087 1 - 75148670 A i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663888 48 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=17325.000000 s hg38.chr17_GL383566v1_alt 46935 12 + 90219 CTCAGTGCAGAC s panTro4.chr17 76237793 12 + 82630442 CTCAGTGCAGAC i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831644 12 + 80904711 CTCAGTGCAGAC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639907 12 + 80997621 CTCAGTGCAGAC i macFas5.chr16 T 62 C 0 s papAnu2.chr16 68647579 12 + 74645514 CTCAGTGCAGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701088 12 - 75148670 CTCAGTGCAGAC i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3663888 48 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=4011.000000 s hg38.chr17_GL383566v1_alt 46947 2 + 90219 AG s panTro4.chr17 76237805 2 + 82630442 AG i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663840 2 - 94967081 AG i nomLeu3.chr14 T 48 C 0 s rheMac3.chr16 74831656 2 + 80904711 AG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639919 2 + 80997621 AG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647591 2 + 74645514 AG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701100 2 - 75148670 AG i chlSab2.chr16 C 0 T 31 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=74779.000000 s hg38.chr17_GL383566v1_alt 46949 47 + 90219 GGTGCCCGACGTGCCTGCTCAGTGCAGACAGGGTGCCCGACGTGTCT s panTro4.chr17 76237807 47 + 82630442 GGTGCCCGACTTGTCTGCTCAGTGCAGACAGGGTGCCCGACGTGTCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663842 46 - 94967081 AATGCCC-ATGTGCCTACTCAGTGCAGACAGGGTGCCTGACGTGTCT i nomLeu3.chr14 C 0 T 30 s rheMac3.chr16 74831658 47 + 80904711 AGTGCCCGGCGTGCCTACTCAGTGCAGACAGCGTGCCTGATGTGTCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74639921 47 + 80997621 GGCGCCCGACGTGCCTACTCAGTGCAGACAGCGTGCCTGATGTGTCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647593 47 + 74645514 CGCGCCCGGCATGCCTACTCAGTGCAGACAGCGTGCCTGATGTGTCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701071 47 - 75148670 GGTGCCCAGCGTGCCTACTCAGTGCAGACAGCATGCCTGATGTGTCT i chlSab2.chr16 T 31 C 0 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=1500.000000 s hg38.chr17_GL383566v1_alt 46996 1 + 90219 G s panTro4.chr17 76237854 1 + 82630442 G i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74831705 1 + 80904711 G i rheMac3.chr16 C 0 T 1 s macFas5.chr16 74639968 1 + 80997621 G i macFas5.chr16 C 0 T 31 s papAnu2.chr16 68647640 1 + 74645514 G i papAnu2.chr16 C 0 T 31 s chlSab2.chr16 30701118 1 - 75148670 G i chlSab2.chr16 C 0 T 31 e nomLeu3.chr14 3663888 30 - 94967081 T e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=35459.000000 s hg38.chr17_GL383566v1_alt 46997 30 + 90219 CTCAGTGCAGACAGGGTGCCTGACGTGTCA s panTro4.chr17 76237855 30 + 82630442 CTCAGTGCAGACAGTGTGCCTGACGTGTCA i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663858 30 - 94967081 CTCAGTGCAGACAGGGTGCCTGACGTGTCT i nomLeu3.chr14 T 30 C 0 s macFas5.chr16 74639938 30 + 80997621 CTCAGTGCAGACAGCGTGCCTGATGTGTCT i macFas5.chr16 T 31 C 0 s papAnu2.chr16 68647610 30 + 74645514 CTCAGTGCAGACAGCGTGCCTGATGTGTCT i papAnu2.chr16 T 31 C 0 s chlSab2.chr16 30701088 29 - 75148670 CTCAGTGCAGACAGCATGCCTGATGTGTC- i chlSab2.chr16 T 31 C 0 e canFam3.chr9 57415089 300 - 61074082 I e rheMac3.chr16 74831706 1 + 80904711 T e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C a score=546.000000 s hg38.chr17_GL383566v1_alt 47027 2 + 90219 AT s panTro4.chr17 76237885 2 + 82630442 AT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663888 2 - 94967081 AT i nomLeu3.chr14 C 0 C 0 e canFam3.chr9 57415089 300 - 61074082 I e rheMac3.chr16 74831706 1 + 80904711 T e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523035 0 + 159171411 C e chlSab2.chr16 30701117 0 - 75148670 C e papAnu2.chr16 68647640 0 + 74645514 C e macFas5.chr16 74639968 0 + 80997621 C a score=-705.000000 s hg38.chr17_GL383566v1_alt 47029 4 + 90219 GTTG s panTro4.chr17 76237887 4 + 82630442 GTTT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663890 4 - 94967081 GTTG i nomLeu3.chr14 C 0 C 0 s chlSab2.chr16 30701117 1 - 75148670 --T- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126523035 4 + 159171411 ACTG i calJac3.chr5 C 0 C 0 e canFam3.chr9 57415089 300 - 61074082 I e rheMac3.chr16 74831706 1 + 80904711 T e ponAbe2.chr17 67336611 927 + 73212453 M e papAnu2.chr16 68647640 0 + 74645514 C e macFas5.chr16 74639968 0 + 80997621 C a score=570015.000000 s hg38.chr17_GL383566v1_alt 47033 253 + 90219 GACATCTCAAAAGGTGGCATACGGTCCCAgcagagagctgcagtggggttacgggcacagaccgggaagcatgctgctgccaggaactgaatttgggctcccctgcagagaagctgtgagacctcaagcaggggacttaagctctctgtgcttctgtttcctcatctgtgaaatgggTGCTAGAGGAACTGTGATGAGGTGTCAGTGAATCTGCAGCATAAAGCCCAGAGCCAAAGCCACTTGCAAACGAGGG s panTro4.chr17 76237891 253 + 82630442 GACATCTCAAAAGGTGGCATACGGTCCCAgcagagagctgcagtggggttacgggcacagaccgggaagcatgctgctgccaggaactgaatttgggctcccctgctgagaagctgtgagacctcaagcaggggacttaagctctctgtgcttctgtttcctcatctgtgaaatgggTGCTAGAGGAACTGTGATGAGGTGTCAGTGAATCTGCAGCATAAAGCCCAGAGCCAAAGCCACTTGCAAATGAAGG i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3663894 253 - 94967081 GACATCTCAAAAGGTGGCATAAGGTCCCAgcagagagctgcagtggggttacgggcatcgaccgagaagcatgctgctgccaggaactgaatttgggctcccctgctgagaagctgtgagacctcaagcaggggccttaagctctctgtgcttctgtttcctcatctgtgaaatgggTGCTAGAGGAGCTGTGATGAGGTGTCAGTGAATCTGCAGCATAAAGCCCAGAGCCAAAGCCACTTGCACACGAGGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74831705 247 + 80904711 GACATCTCAAAAGGTGGCATAAGGCCCCAGCAGAGAGTTgcagtggggttac------agaccgggaagcatgctgctgccaggaactgagtttgggctcccctgctgagaagctgtgagacctcaggcaggggacttaagctctctgtgcttctgtttcctcatctgtgaaatgggtgataGAGGAACTGTGATGAGGTGTCAGTGAATCTGCAGCATAAAGCCCAGAGCCAAAGCCACTTGCGCGCAAGGG i rheMac3.chr16 T 1 C 0 s macFas5.chr16 74639968 247 + 80997621 GACATCTCAAAAGGTGGCATAAGGCCCCAgcagagagttgcagtggggttac------agaccgggaagcatgctgctgccaggaactgagtttgggctcccctgctgagaagctgtgagacctcaggcaggggacttaagctctctgtgcttctgtttcctcatctgtgaaatgggtgataGAGGAACTGTGATGAGGTGTCAGTGAATCTGCAGCATAAAGCCCAGAGCCAAAGCCACTTGCGCGCAAGGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647640 247 + 74645514 GACATCACAAAAGGTGGCATAAGGTCCCAGCAGAGAGTTGCAGTGGGGTTAC------AGACCGGGAAGCATGCTGCTGCCAGGAACTGAGTTTGAGCTCCCCTGCTGAGAAGCTGTGAGACCTCAGGCAGGGGACTTAAgctctctgtgcttctgtttcctcatctgtgaaatgggtgatAGAGGAACTGTGATGAGGTGTCAGTGAATCTGCGGCATAAAGCCCAGAGCCAAAGCCACTTGTGCGCAAGGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701118 246 - 75148670 GACATCTCAAAAGGTGGCATAAGG-CCCAgcagagagttgcagtggggttac------agaccgggaagcatgctgctgccaggaactgagtttgggctcccctgctgagaagctgtgagacctcaagcaggggacttaagctctctgtgcttctgtttcctcatctgtgaaatgggtgataGAGGAACTGTGATGAGGTGTCAGTGAATCTGCAGCATAAAGCCCAGAGCCAAAGCCACTTGCACTCAAGGG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126523039 245 + 159171411 GACATCCCAAAAGGTGGCGTagaggcccagcagagggctgctgtggagttccaggcacagacc--------cgctgctgtcaggaactgagtttgggcttgcctgctgagcggctgtgagacctggagcaggggacgtgagctctcggtgcttctgtttcctcatctgtgaaatgggTGCTGTAGGAACTGTGATAAGATGTCAGTGAATCTGTGGTGTGAAGCACAGAGCCAAAGCCATGTGTTAAGGAAGG i calJac3.chr5 C 0 I 267 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M a score=958318.000000 s hg38.chr17_GL383566v1_alt 47286 527 + 90219 CTCATATCAGAGGGGCTTGCTGGAGGCAAGTTTTGAGGAATAGAGATGGGACTGTGAAGGGACTCAAGCCAGGATAGGGGGCCC--CCCGAGCACCCCTGGCAAAGGAGCCTCTGCTGGTGGTTTTCTGAACTCGAGTCCTGGCCCCAGGCAGAAGTGGGGAGCTTTCTTGGGAGGGCTTGGCCACCT-CGGCTGGGGCTGGGTGCAGAGAGGCAGCAGCCCTGCCCCTGGAGCCTTCTGAAGGGTGGCTGGAGCTGCCTGGGCAGGTCACCCTCCACATTTCCAGCGTTTCCCAGGGAAGGGTGCTCGAAGTTGCCATGCAACACCAGGAGGGTAGGTTCAGGTGGGAGGCTCATGAAGGGCTCGCTGCCTGGATGGCACTGAACCACAAGGACCAGCAGCTGGGGTGGGTGGGGCTGCCTGGGGGAGGGGTGCCCTGGAGGATGTCCTTTGCAGGGGATGGGAGAGAGGAGGCATGTATGAGGGTGGAGGGGAGCAAGGAGGTAGAAGGGCTGATCCCTACTACTGCC s panTro4.chr17 76238144 527 + 82630442 CTCAAATCAGAGGGGCTTGCTGGAGGCAAGTTTTGAGGAATAGAGATGGGACTGTGAAGGGACTCAAGCCAGGAGAGGGGGCCC--CCCGAGCACCCCTGGCAAAGGAGCCTCAGCTGATGGTTTTCTGAACTCGAGTCCTGGCCCCAGGCAGAAGTGGGGAGCTTTCTTGGGAGGGCTTGGCCACCT-CGGCTGGGGCTGGGTGCAGAGAGGCAGCAGCCCTGCCCCTGGAGCCTTCTGAAGGGTGGCTGGAGCTGCCTGGGCAGGTCACCCTCCACATTTCCAGCGTTTCCCAGGGAAGGATGCTCGAAGTTGCCATGCAACACCAGGAGGGTAGGTTCAGGTGGGAGGCTCATGAAGGGCTCGCTGCCTGGATGGCATTGAACCACAAGGACCAGCAGCTGGGGTGGGTGGGGCTGCCTGGGGGAGGGGTGCCCTGGAGGATGTCCTTTGCAGGGGATGGGAGAGAGGAGGCATGTATGAGGGTGGAGGGGAGCAAGGAGGTAGAAGGGCTGATCCCTACTACTGCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3664147 526 - 94967081 CTCAGATCAGAGGGGCTTGCTGGAGGCAAGTTTCGAGGAATAGAGATGGGACTGTGAAGGGTCTCAAGCCAGGAGAGGGGGCCC--CCCGAGCACCCCTGGCAAAGGAGCCACAGTTGGTGGTTTTCTGAACTCCAGTCCTGGCCCCAGGCAGAAGTGGGGAGCTTTCTTGGGAGGGCTTGGCCACCT-CGGCTGGGGCTGGGTGCAGAGAGGCAGCAGCCCTGCCCCTGGAGCCTTCTGAAGGGTGTTTGGAGCTGCCCAGGCAGGTCACCCTCCACATCTCCAGCGTTTCCCAGGGAAGGATGCTCGAAGTTGCCATGCAACACCAGGAGGGTAGG-TCGGGTGGGAGGCTCATGAAGGGCTCGCTGCCTGGATGGCATTGAACCACGAGAACCAGCAGATGGGGTGGGTGGGGCTGCCTGGGGGAGGGGTGCCCTGGAGGATGTCCTTTGCAGGGGGTGGGGGAGAGGAGGCATGTATGAGGGTGGAGGGGAGCAAGGAGGTAGAAGAGCTGATCCCCACTGCTGCC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74831952 524 + 80904711 CTCAAATCAAAGGGGCTTGCTAGAGGCAAGTTTTGAGGAATAGAGATGGGACTGTGAAGGGCCTCAAACCAGGAGAGGGGGCCCCTCCCGAGCACAACTGGCAGAGGAGCCTCAGCCGGTGGTTTTCTGAACTTGAGTCCTGGCCCCAGGCAGAAGTGGGGAGCGTTCTTGGGAGGGCTTGGCCACCTGCGGCTGGGGCTGGGTACAGAGACACAGCAGCCCTGCCCCTGGAGCCTTCTGAAGGGTGGCTGGAGCTGCCTGGGCTGGTCACCCTCCACATTTCCAGCGTTTCCCAGGGAAAGATGCTCGAAGT-----TGCAACACCAGGAGGGTAGG-TCAGGTGGGAGGCTCATGAAGGGCTCACTGCCTGGATGGCATTGAACCACCAGGACCAGCAGCTGGGGTGGGTGGGGCTGCCTGGGGGAGGGGTGCCCTGGAGGATGTCCTTTGCAGGGGTTGGGGGAGAGGAGGCATGCACGAGGGTGGAGGGGAGCAAGGAGGTGGAAGAGCTGATCCCCACTGCTGCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74640215 524 + 80997621 CTCAAATCAAAGGGGCTTGCTAGAGGCAAGTTTTGAGGAATAGAGATGGGACTGTGAAGGGCCTCAAACCAGGAGAGGGGGCCCCTCCTGAGCACAACTGGCAGAGGAGCCTCAGCCGGTGGTTTTCTGAACTTGAGTCCTGGCCCCAGGCAGAAGTGGGGAGCGTTCTTGGGAGGGCTTGGCCACCTGCGGCTGGGGCTGGGTACAGAGACACAGCAGCCCTGCCCCTGGAGCCTTCTGAAGGGTGGCTGGAGCTGCCTGGGCTGGTCACCCTCCACATTTCCAGCGTTTCCCAGGGAAAGATGCTCGAAGT-----TGCAACACCAGGAGGGTAGG-TCAGGTGGGAGGCTCATGAAGGGCTCACTGCCTGGATGGCATTGAACCACCAGGACCAGCAGCTGGGGTGGGTGGGGCTGCCTGGGGGAGGGGTGCCCTGGAGGATGTCCTTTGCAGGGGTTGGGGGAGAGGAGGCATGCACGAGGGTGGAGGGGAGCAAGGAGGTGGAAGAGCTGATCCCCACTGCTGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68647887 524 + 74645514 CTCAAATCAGAGGGGCTTGCTAGAGGCAAGTTTTGAGGAATAGAGATGGGACTGTGAAGGGCCTCAAACCAGGAGAGGGGGCCCCTCCCGAGCACAACTGGCGGAGGAGCCTCAGCCGGTGGTTTTCTGAACTTGAGTCCTGGCCCCAGGCAGAAGTGGGGAGCGTTCTTGGGAGGGCTTGGCCACCTGCGGCTGGGGCTGGGTACAGAGAGACAGCAGCCCTGCCACTGGAGCCTTCTGAAGGGTGGCTGGAGCTGCCTGGGCTGGTCACCCTCCACATTTCCAGCGTTTCCCAGGGAAAGATGCTCGAACT-----TGCAACACCAGGAGGCTAGG-TCAGGGGGGAGGCTCATGAAGGGCTCACTGCCTGGATGGCATTGAACCACCAGGACCAGCagctggggtgggtggggctgtctgggggaggggtgccctggaggatgtcctttgcaggggttgggggagaggaggCATGCACGAGGGTGGAGGGGAGCAAGGAGGTGGAAGAGCTGATCCCCACTGCTGCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701364 521 - 75148670 CTCAAATCAGAGGGGCTTGCTAGAGGCAAGTTTTGAGGAATAGAGATGGGACTGTGAAGGGCCTCAAACCAGGAGAGGGGGCCCC-CCTGAGCACAACTGGCAGAGGAGCCTCAGCTGGTGGTTTTCTGAACTTGAGTCCTGGCCCCAGGCAGAAGTGGGGAGCGTTCTTGGGAGGACTTGGCCACCTGCGGCTGGGGCTGGGTGCAGAG--ACAGCAGCCCTGCCACTGGAGCCTTCTGAAGGGTGGCTGGAGCTGCCTGGGCTGGTCATCCCCCACATTTCCAGCGTTTCCCAGGGAAAGATGCTCGAAGT-----TGCAACACCAGGAGGGTAGG-TCAGGTGGGAGGCTCATGAAGGGCTCACTGCCTGGATGGCATTGAACCACCAGGACCAGCAGCTGGGGTGGGTGGGGCTGCCTGGGGGAGGGATGCCCTGGAGGATGTCCTTTGCAGGGGCTGGGGGAGAGGAGGCATGCACGAGGGTGGAGGGGAGCAAGGAGGTGGAAGAGCTGATCCCCACTGCTGCC i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57415089 300 - 61074082 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I a score=112783.000000 s hg38.chr17_GL383566v1_alt 47813 56 + 90219 CCCTGCAGCTTGCCATCAGATGTGAGACGGAAGTTTTGACTTAGACTGGTTTGGTT s panTro4.chr17 76238671 56 + 82630442 CCCTGCAGCTTGCCATCAGATGTGAGATGGAAGTTTTGACTTAGACTGGTTTGGTT i panTro4.chr17 C 0 M 1309 s nomLeu3.chr14 3664673 55 - 94967081 CCCTGCAGC-TGCCATCAGATGTGAGATGGAAGTTCTGACTTAGACTGGTTTGGTT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74832476 56 + 80904711 CCCGGCAGCTTGCCATCAGATGTGAGATGGAAGTTTTGACTTAGACTGGTTTGATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74640739 56 + 80997621 CCCGGCAGCTTGCCATCAGATGTGAGATGGAAGTTTTGACTTAGACTGGTTTGATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648411 56 + 74645514 CCTGGCAGCTTGCCATCAGATGTGAGATGGAAGTTTTGACTTAGACTggtttgatt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701885 56 - 75148670 CCCGGCAGCTTGCCATCAGATGTGAGATGGAAGTTTTGACTTAGACTGGTTTGATT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57415389 54 - 61074082 CCCCACAGCCTGGAAT-GGGCGTGACAT-GACGTGTTGGTTTAGACCAGTCTGGCT i canFam3.chr9 I 300 C 0 e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I a score=197767.000000 s hg38.chr17_GL383566v1_alt 47869 146 + 90219 ATTTTAATATG----GGACAGCAAGCCTGGATTGGCCAAGATGAGATGGTTCAT-TTGCTGAAGCTAGATGAACAGCTTTGGGAA-CTGCCTAAGTTGTTAACCAAAGTGATGAAG------GAGGCCCATAGGGTATGAGGGAAGGCCAGA-------------ATGGAA----- s nomLeu3.chr14 3664728 146 - 94967081 ATTTTAATATG----GGACAGCAAGCCTGGATTGGCCAAGATGAGATGGTTCAT-TTGCTGAAGGTAGATGAACAGCTTTGGGAA-CTGCCTAAGTTGTTAACGAAGGTGATGAAG------GAGGCCCATAGGGTATGAGGGAAGGCCAGA-------------GTGGAA----- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74832532 146 + 80904711 ATTTTAATATG----GGTGAGCAAACCTGGATTGGCCAAGATGAGATGGTTCAT-TTGCTGAAGCTAGATGAACAGTTTTGGGAA-CTGCCTAAGTTGTTAACGAAGGTGATGAAG------GAGACCCATAGGGTATGAGGGAAGGCCAGA-------------GTGGAA----- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74640795 146 + 80997621 ATTTTAATATG----GGTGAGCAAACCTGGATTGGCCAAGATGAGATGGTTCAT-TTGCTGAAGCTAGATGAACAGTTTTGGGAA-CTGCCTAAGTTGTTAACGAAGGTGATGAAG------GAGACCCATAGGGTATGAGGGAAGGCCAGA-------------GTGGAA----- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648467 146 + 74645514 attttaatatg----gGTGAGCAAACCTGGATTGGCCAAGATGAGATGGTTCAT-TTGCTGAAGCTAGATGAACAGCTTTGGGAA-CTGCCTAAGTTGTTAATGAAGGTGATGAAG------GAGACCCATAGGGTATGAGGGAAGGCCAGA-------------GTGGAA----- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30701941 146 - 75148670 ATTTTAATATG----GGTGAGCAAACCTAGATTGGCCAAGATGAGATGGTTCAT-TTGCTGAAGCTAGATGAACAGTTTTGGGCA-CTGCCTAAGTTGTTAACGAAGGTGATGAAG------GAGACCCATAGGGTATGAGGGAAGGCCAGA-------------GTAGAA----- i chlSab2.chr16 C 0 I 249 s canFam3.chr9 57415443 165 - 61074082 CTTTTAATCTGTGACGGTGAGTGGAGCTGAA-----CAAGGTGAGGTGGTTCTTAGTGCTGAGGACACCTG----GCGTTGGGGGCCTGCCCGGGGTGTT--CCAAGGCGGTGGGGGTGCCTGAGCCGCAGAGAAATCGAGAAATGACCCGCTGAGCTGGGCCCTGCAGGAGGCTG i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=37702.000000 s hg38.chr17_GL383566v1_alt 48015 33 + 90219 TCCATCCCCATCACCTCCTC-----------------------CATCCCCATCACC s nomLeu3.chr14 3664874 33 - 94967081 TCCATCCCCATCACCTCCTC-----------------------CATCCCCATCACC i nomLeu3.chr14 C 0 I 18 s rheMac3.chr16 74832678 33 + 80904711 TTCATTCTTATCACCTcctc-----------------------catccccatcacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74640941 33 + 80997621 TTCATTCTTATCACCTCCTC-----------------------CATCCCCATCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648613 33 + 74645514 Ttcatcctcatcccctcctc-----------------------catccccatcacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702336 33 - 75148670 TCCATCCCCATCACCTCCTC-----------------------CTTCCCCATCACC i chlSab2.chr16 I 249 C 0 s canFam3.chr9 57415608 56 - 61074082 GTCACGCTCACTGCTCACCCTGAACTTCGGCCTGTGGAGGAGGCAGCCCAGCTGcc i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=41771.000000 s hg38.chr17_GL383566v1_alt 48048 46 + 90219 --TCCCCACTTCCTTCATCCCCATCACCTCCTCCATCCCCATTACTTC s nomLeu3.chr14 3664925 46 - 94967081 --TCCACCCTTCCTCCATCCCCATCACCTCCTTCATCCCCATCACCAC i nomLeu3.chr14 I 18 T 64 s rheMac3.chr16 74832711 38 + 80904711 --tcctc--------cacccccatcacctcctccattcccatcatctc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74640974 38 + 80997621 --TCCTC--------CACCCCCATCACCTCCTCCATTCCCATCATCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648646 38 + 74645514 --tcctc--------cattcccatcacctcctccatccccatgacctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702369 46 - 75148670 --TCCCCACTTCCTTCATCCCCATCACCTCCTCCATCCCCATCACCTC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57415664 42 - 61074082 ttccctccactaccctacctctcctacctcc--catccccaccc---- i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=28152.000000 s hg38.chr17_GL383566v1_alt 48094 31 + 90219 CTCCATCCT---CACCTCCTTCATCCCCATCACT s rheMac3.chr16 74832749 33 + 80904711 ctccattct-atcacctcctccattcccatcacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74641012 33 + 80997621 CTCCATTCT-ATCACCTCCTCCATTCCCATCACC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648684 34 + 74645514 cttcatcctcatcacctcctccatccccatcacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702415 34 - 75148670 CTCCATGCTCATCACCTCCTTCATCCCCATCACT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57415706 31 - 61074082 ctccacccc-atcccttccct--tccccatctcc i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3664971 64 - 94967081 T e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=41208.000000 s hg38.chr17_GL383566v1_alt 48125 61 + 90219 TCCT--------------------------CCATCCTCATCACCT---------------CCC--CATCTCCTTCATCCCCATCACCTCCTCCATTCCCATCAT s nomLeu3.chr14 3664907 61 - 94967081 CCCT--------------------------CCATCCTCATCACCT---------------CCA--CCCTTCCTCCATCCCCATCACCTCCTTCATCCCCATCAC i nomLeu3.chr14 T 64 C 0 s rheMac3.chr16 74832782 43 + 80904711 tccc-------------------------------------------------------------cacctccttcatccccatcaacttctccatccccatcac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74641045 97 + 80997621 TCCCCACCTCCTTCATCCCCATCAACTTCTCCATCCCCATCACCT-----CCTCCTTC--CCCATCACTTCCTTCATCCCCATCACCTCCTCCATCCCCATCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648718 69 + 74645514 tcct--------------------------ccattcccatcatct-----cctccat---tctatcacctcctccattcccatcacctcc-cctcctccttcac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702449 77 - 75148670 TCCT--------------------------CCATCCTCATCACCTCCTCACCTCCTTCATCCCATCACCTCCTCCATTCCCATCATCTCCTCCAT-TCTATCAC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57415737 60 - 61074082 -tct--------------------------ctgtccgcctcccat---------------ccc--cttccccgccatccccaccacctccacccttctccccAC i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=26231.000000 s hg38.chr17_GL383566v1_alt 48186 35 + 90219 CTCCTCCATTT--------------------------TATCACCTCCCCCATCCCCATCAC s nomLeu3.chr14 3664968 24 - 94967081 C-------------------------------------ACCACCTCCTTCATCCCCATCAC i nomLeu3.chr14 C 0 I 102 s rheMac3.chr16 74832825 36 + 80904711 ctcctccttccc-------------------------ccccacttccttcatccccatcac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74641142 44 + 80997621 CTCCTCCTTCCCCATCACCT-----------------CCCCACTTCCTTCATCCCCATCAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648787 44 + 74645514 ctcctccatccccatcacct-----------------ccccacttcctccatccccatcac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702526 61 - 75148670 CTCCTCCATCCCCATCACCTCCTCCATGCTCATCACCTCCCACCTCCTTCATCCCCATCAC i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57415797 0 - 61074082 C e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=80599.000000 s hg38.chr17_GL383566v1_alt 48221 137 + 90219 CTCCTCCATCCTCATCACCTCCTCCATTCCCATCATCGCCTTCAT-TCTA-----------------TCACCTCCTCCATTCCCATCACCTCC----------CCACCTCCTTCATCTCCATCACCTCCTCCCCATCTCCATCACCTCCTG---------------TCACCTCCTCCATC- s rheMac3.chr16 74832861 143 + 80904711 ctcctccatccccaTCACCTCCTCCATGCTcatcacctccttcatcccca-----------------tcacttcctccatcctcatcacctcc----------tcacctccttcat-cccatcacctcct--ccattcccatcatctcctc--------cattctatcacctcctccattc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74641186 143 + 80997621 CTCCTCCATCCCCATCACCTCCTCCATGCTCATCACCTCCTTCATCCCCA-----------------TCACTTCCTCCATCCTCATCACCTCC----------TCACCTCCTTCAT-CCCATCACCTCCT--CCATTCCCATCATCTCCTC--------CATTCTATCACCTCCTCCATTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648831 149 + 74645514 ctcctccttccccatcacctcc-----------cacttccttcat-ccca-----------------tcacttcctccatgcccatcacctcctccatgctcatcacctccttcatccccatcacttcct--caatcctcatcacctcctcacctccttcatcccatcacc-cctccattc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702587 151 - 75148670 CTCCTCCATCCCCATCACCTCCTCCATCCTCATCACCTCCTCCATTCCCATTATCTCCTCCATTCTGTCATCTCCTCCATTCCCATCACCTCC----------CCACCTCCTTCATCCTCATCACATCCT--CCATCCCCATCATCTCCCC-----------------ACCTCCTCCATC- i chlSab2.chr16 C 0 T 298 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57415797 0 - 61074082 C e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=5610.000000 s hg38.chr17_GL383566v1_alt 48358 6 + 90219 -CCATCA s rheMac3.chr16 74833004 6 + 80904711 -ccatca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74641329 6 + 80997621 -CCATCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68648980 6 + 74645514 -ccatca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702440 7 - 75148670 CCCATCA i chlSab2.chr16 T 298 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57415797 0 - 61074082 C e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=9150.000000 s hg38.chr17_GL383566v1_alt 48364 26 + 90219 TCTCCCCACCTCCTCCATCCCCATCA s rheMac3.chr16 74833010 26 + 80904711 cctccccacctccttcatccccatca i rheMac3.chr16 C 0 I 434 s macFas5.chr16 74641335 26 + 80997621 CCTCCCCACCTCCTTCATCCTCATCA i macFas5.chr16 C 0 I 29 s papAnu2.chr16 68648986 20 + 74645514 tctcctccgttctatcacct------ i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702447 18 - 75148670 CTTCCTC--------CATCCTCATCA i chlSab2.chr16 C 0 I 8 s canFam3.chr9 57415797 26 - 61074082 TGTCCCTATTGCCTCCCTTGGcatca i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=21368.000000 s hg38.chr17_GL383566v1_alt 48390 26 + 90219 CCTCCATC------CTCATCATCTCCTCCATT s rheMac3.chr16 74833470 26 + 80904711 cctccatc------cccatcacctccTGCATT i rheMac3.chr16 I 434 C 0 s macFas5.chr16 74641390 26 + 80997621 CCTCCATC------CCCATCACCTCCTGCATT i macFas5.chr16 I 29 C 0 s papAnu2.chr16 68649006 26 + 74645514 cctccatc------cccatcacctcctccatc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702473 28 - 75148670 CCTCCTTCA----TCCCATCACCTCCTCCATT i chlSab2.chr16 I 8 I 237 s canFam3.chr9 57415823 32 - 61074082 cctccctcactcctgtccccatcccctccatc i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=66929.000000 s hg38.chr17_GL383566v1_alt 48416 68 + 90219 C-----------------CCATCACCTCCTCCATT-CTATCACCTCCTCCACCTCCACATCCTG-AGCCACTTCCCCTCAGCTTCAT s rheMac3.chr16 74833496 68 + 80904711 ------------------CTATCACCTCCTCCATCCCCATCACCTCCTCCACCTCTACATCCTG-AGCCACTTCCCCTCAGCTTCAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74641416 68 + 80997621 ------------------CTATCACCTCCTCCATCCCCATCACCTCCTCCACCTCTACATCCTG-AGCCACTTCCCCTCAGCTTCAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68649032 68 + 74645514 ------------------ccatcacctcctccattcccatcacctcctccacctctacatcctG-AGCCATTTCCCCTCAGCTTCAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702738 86 - 75148670 CCCATCACCTCCTGCATTCTATCACCTCCTCCATCCCCATCACCTCCTCCACCTCTACATCCTG-AGCCACTTTCCCTCAGCTTCAT i chlSab2.chr16 I 237 C 0 s canFam3.chr9 57415855 58 - 61074082 -----------------tccatcccctcctctatc------------tctacctctacatcccattaccacttcttcccAGTTTCAT i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e ponAbe2.chr17 67336611 927 + 73212453 M e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=1302138.000000 s hg38.chr17_GL383566v1_alt 48484 982 + 90219 TTCCTGAAACAGCCCCTCCTCACCCTCTCCAGCTTCCTTTCCTTCACCTTACCATGCTCCTTTCTGGAAGGCACCACTCCAAACCGTCTCCT---TGGAAAAGCAACTTCAGCCCCAGTGCCTGTCCCTGCTACACCCAACGTTCCTGTCTGGAAAAGAGT-------TGCTCTTTATTCAGCACGTGAGTTCCTGACCCCCAGATAAGGGCCAGTGCAGCCGGGGAGGGAAGCATTAGTGCTGCCGGGTGGAAGGTGGACGGCGCCTGGATCCAGA-CCCAGCAGTGCTCATGGGGCCAGGCCTGGTGCT-CGTtctttctcagtccttaacgccaccttgcaaggtggggattgtcctcccatctggcc-atgaagagctgaagcagagaggtgcagtcgctcatctgcgctcactggtcagtggGTCGCTGCGTCCCCAGAGGCCCCTGGGCAGGGTGGGCGCTGCGTCCCCAGAGGCCCCTGGGCAGGGTGGACGCCTCTGCAGGTGCCCGCACAGGGGCTTTCTCCTTCACTTGGCCACACTCAGCCTTTGATCTG-AAACAATGAAAGCCCCTGAGTCACTGGTCCTTCCCGAGCCCGTGTGTGGCCCACAGCAAGGAGCTGCCTGTCCCAAGTTCGGGGGGTTTCTTTGGCTTACGCGGATACTGTATGTGAGTGTTGGCAGAGCAGCGTGAGCCTCGGCCTGCAAACTCAGGACGGC---ACCAAGCCCCATCGCCTTGGTATCTTCCAGGTGGACCCTCAGCCTGCTGAGTGGACAGGAAACCATCTGTCATTTAGGGTTCCTGCTC--CCAACTCCCCCCAACAGCTGTCACCACCACCGT-GGTTGTGCAAAGGTCCCAGGCCTTTCAGAGTGGGCCCTGATCACTGTCCATCCTGGCCGGGT-CTGCTGAAACAAACATGGTCACAATCTCGTGGTACTTTCTGCCTCGTGGCTCTGTGTCCACACTGGAGAGACTAGGACCC-----AATCCTGG s ponAbe2.chr17 67337556 935 + 73212453 TTCCTGAAACAGCCCTTCCTCACC-TCTCCAGCTTCGTTTC-TCGACCTTACCATGCTCCTTT---GAAGGCACCACTCCAA-CCGTCTCCT----GGAAAAGCTACTTCAGCCCCAGTGCCTGTCC-TGCCACACCCAACGTTCATGTCTGGAAA-GAGT--------GCTCTTTATTCAGCACGTGAGTTCCTGACCCCCAGATAAGGGCCAGTGCAGCCGGGGAGG-AAGCATTAGTGCTGCCAGGTGGAAGGTGGACGGCGCCTGGATCCAGA-CCCAGCAGCGCTCATGGGGCCAGGCCTGGTGCT-GGTtctttctcagtccttgatgccaccttgcaaggtggggattgtcctcccatctggcc-atgaagagctgaagcagagaggtgcagtcgcccatctgcgctcactggtcagtgagtcgcTGCGTCCCCAGAGGCCCCTGGGCAGGGTGGGCGC----------------------------------CTCTGCAGGTGCCCGCACAGGGGCTTTCTCCTTCACT-GACCACACTGAGCCTTTGATCTG-AAATAATGAAAGCCCCTGAGTCACTGGTCCTTTCCGAGCCAGTGTGTGGCCCACAGCAGGGAGCTGCCTGTCCCGAGTTCGGGGGGTTTCTTTGGCTTACGCGGATACTGTATGTGAGTGTTGGCAGAGCAGCGTGAGCCTCGGCCTGCAAACTCAGGACGGC---AACAAGCCC-ATCGCCTTGGCATCTTCCAGGCGGACCCTCAGCCTGCTAAGTGGACAGGAAACCATCTGTCATTTAGGGTTCCTGCTC--CCAACTCCCCCCAACAGCTGTCACCACCACCGT-GGTTGTGCAAAGGTCCCAGGCCTTTCAGAGTGGGCCCTGATCACTGTCCATCCTGGCCAGGT-CTGCCGAAACAAACATGGTCACAATCTCATGGTACTTTCTGCCTCGTGGCTTTGTGTCCACACTGGAGAGACTAGGACCC-----GATCCTGG i ponAbe2.chr17 M 927 C 0 s rheMac3.chr16 74833564 945 + 80904711 TTCCTGAAACAGCCC-TCCTCGCCCTCTCCAGCTTCCTTTCCTTGACCTTACCATGCTCCTTTCTGGAAGACA-CACTCCAAACCGTCTCCT---TGGAAAAGCTACTTCGGCCCCAGTGCCTGTCCCTACCATACCCAACATTCCTGTCTGGGAAAGGGT-------TCCTCCTTATCCAGCACATGAGTTCCTGACCCCCAGATAAGGGCCAGTGCAGCTGGGGAGG-AAACATTAGTGCTGCCAGGTGGAAAGTGGAAGGTACCTGGATCCACACCCCAGCAGCGCTTAGGGGGCCAGGCCTGGTGCC-GGTTCTTTCTCAGTCCTTGATGCCACCTTGAAAGGTGGGGATTGTCCTTCCATTTGGCC-ATGAAGAGCTGAAGCAGAAAGGTACAGTCGCCCATCTGTGCTCACTGGTCACTGAGTCGCTGCGTCCCCAGAGGCCCCTGGGCAGGGT----------------------------------TGATGCCTCTGCAGGTGCCCACACAGGGGCTTTCTCCTTCACTTGGCCACACTCAGCCTTTGATCTG-GAACAATGAAAGCCCCTGAGTAACTGGTCCTTCCCGAGCCAGTGTGTGGCCCACGGCAAGGAGCTGCCTGTCCTGAGTTCGGGGAGTTTATTTGGCTTACGTGGATACTGTACGTAAATGTTGGCAGAGCCACGTGAGCCTCGGCCTGCAAACTCAGGATGGC---ACCAAGCTC-ATTGCCTTGGCATCTTCCAGGtggaccctcagcctgctgagtggacaggaaaccatctgtcatttagagttcctgctc--ccaactccccccaacagctgtcaccaccaccgt-ggttgtgcaaaggtcccaggcctttcagagtgggccctgatcactctccaccctggctgggt-ccgctgaaacaaacatggtcacagtctcatggtaccttctgcctcgtggctctgtgtccacattggagagactaggaccc-----agtcctgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74641484 945 + 80997621 TTCCTGAAACAGCCC-TCCTCGCCCTCTCCAGCTTCCTTTCCTTGACCTTACCATGCTCCTTTCTGGAAGACA-CACTCCAAACCGTCTCCT---TGGAAAAGCTACTTCGGCCCCAGTGCCTGTCCCTACCACACCCAACATTCCTGTCTGGGAAAGGGT-------TCCTCCTTATCCAGCACATGAGTTCCTGACCCCCAGATAAGGGCCAGTGCAGCTGGGGAGG-AAACATTAGTGCTGCCAGGTGGAAAGTGGAAGGTACCTGGATCCACACCCCAGCAGCGCTTAGGGGGCCAGGCCTGGTGCC-GGTTCTTTCTCAGTCCTTGATGCCACCTTGAAAGGTGGGGATTGTCCTTCCATTTGGCC-ATGAAGAGCTGAAGCAGAAAGGTACAGTCGCCCATCTGTGCTCACTGGTCACTGAGTCGCTGTGTCCCCAGAGGCCCCTGGGCAGGGT----------------------------------TGATGCCTCTGCAGGTGCCCACACAGGGGCTTTCTCCTTCACTTGGCCACACTCAGCCTTTGATCTG-GAACAATGAAAGCCCCTGAGTAACTGGTCCTTCCCGAGCCAGTGTGTGGCCCACGGCAAGGAGCTGCCTGTCCTGAGTTCGGGGAGTTTATTTGGCTTACGTGGATACTGTACGTAAATGTTGGCAGAGCCACGTGAGCCTCGGCCTGCAAACTCAGGATGGC---ACCAAGCTC-ATTGCCTTGGCATCTTCCAGGtggaccctcagcctgctgagtggacaggaaaccatctgtcatttagagttcctgctc--ccaactccccccaacagctgtcaccaccaccgt-ggttgtgcaaaggtcccaggcctttcagagtgggccctgatcactctccaccctggctgggt-ccgctgaaacaaacatggtcacagtctcatggtaccttctgcctcgtggctctgtgtccacattggagagactaggaccc-----agtcctgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68649100 934 + 74645514 TTCCTGAAACAGCCC-TCCTCGCCCTCTCCAGCTTCCTTTCCTTGACCTTACCATGCTCCTTTCTGGAAGACACCACTCCAAACCGTCTCCT---TGGAAAAGCTACTTCGGCCCCAGTGCCTGTCCCTACCACACCCAACATTCCTGTCTGGGAAAGGGT-------TCCTCTTTATCCAGCACATGAGTTCCTGACCCCCAGATAAGGGCCAGTGCAGCCAGGGAGG-AAGCATTAGTGCTGCCAGGTGGAAAGTGGAAGGTACCTGGATCCACACCCCAGCAGTGCTTAGGGGGCCAGGCCtggtgct-ggttctttctcagtCCTTGATGCCACCTTGAAAGGTGGGTATTGTCCTCCCATTTGGCC-ATGAAGAGCTGAAGCAGAAAGGTACAGTCGCCCATCTGTGCTCACTGGTCACTGAGTTGCTGCGTCCCCAGAGGCCCCTCGGCAGGGT----------------------------------TGATGCCTCTGCAGGTGCCCGCACAGGGGCTTTCTTCTTCACTTGGCCACACTCAGCCTTTGATCTGAAAACAATGAAAGCCCCTGAGTAACTGGTCCTTCCCGAGCCAGTGTGTGGCCCACGGCAAGGAGCTGCCTGTCCTGAGTTTGGGGGGTTTCTTTGGCTTACGTGGATACTGTACGTAAATATTGGCAGAGCCGCGTGAGC-------------CTCAGGATGGC---ACCAAGCTC-ATTGCCTTGGCATCTTCCAGGTGGACCCTCAGCCTACTGAGTGGACAGGAAACCATCTGTCATTTAGAGTTCCTGCTC--CCAACTCCCCCCAGCAGCTGTCACCACCACGGT-GGTTGTGCAAAGGTCCCAGGCCTTTCAGAGTGGGCCCTGATCACTCTCCACCCTGGCTGGGT-CCGCTGAAACAAACATGGCCACAGTCTCATGGTACCTTCTGCCTCGTGGCTCTGTGTCCACATTGGAGAGACTAGGACCC-----AGTCCTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30702824 936 - 75148670 TTCCTGAAACAACCC-TCCTCGCCCTCTCCAGCTTCCTTTCCTTGACCTTACCATGCTCCTTTCTGGAAGACACCACTCCAAACCGTCTCCT---TGGAAAAGCTACTTCGGCCCCAGTGCCTGTCCCTACCACACCCAACATTCCTGTCTGGGAAAGGGT-------TCCTCTTTATCCAGCACACGAGTTCCTGACCCCCAGATAAGGGCCAGTGCAGCCGGAGAGG-AAGCATTAGTGCTGCCAGGTGGAAAGTGGAAGGTACCTGGATCCACACCCCAGTGGCGCTTAGGGGGCCAGGCCTGGTGCT-GGTTCTTTCTCAGTCCTTGATGCCACCTTGAAAGGTGGGGAATGTCCTCCTATTTGGCC-ATGAAGAGCTGAAGCAGAAAGGTACAGTCGCCCATCTGTGCTCACTGGTCACTGAGTCGCTGCGTCCCCAGAGGCCCCTGGGCAGGGT----------------------------------TGATGCCTCTGCAGGTGCCCGCACAGGGGCTTTCGCCTTCACTTGGCCACACTCAGCCTTTGATCTG-AAACAATGAAAGCCCCTGAGTAACTGGTCCTTCCCGAGCCAGTGTGTGGCCCACGGCAAGGAGCTGCCTGTCCTGAGTTCAGGGGGTTTCTTTGGCTTACGTGGATACTGTATGTAAATGTTGGCA-------GTGAGCCTCGGCCTGCAAACTCAGGATGGC---ACCAAGC----TTGCCTTGGCATCTTCCAGGTGGACCCTCAGCCTACTGAGTGGACAGGAAACCATCTGTCATTTAGAGTTCCTACTC--CCAACTCCCCCCAACAGCTGTCACCACCACCGT-GGTTGTGCAAAGGTCCCAGGCCTTTCAGAGTGGGCCCGGATCACTCTCCACCCTGGCTGGGT-CTGCTGAAACAAACGTGGTCACAATCTCATTGTACCTTCTGCCTCGTGGCTCTGTGTCCACACTGGAGAGACTAGGACCC-----AATCCTGg i chlSab2.chr16 C 0 I 498 s canFam3.chr9 57415913 845 - 61074082 TTCCTGGAACAGCCC-CCTTTGCC--CACCCGCAGCTGTTTCCTGACCTTGGCGTGGTCCTCCCTGAAAGGCACCCGTCCAAACCATCTCCTACTTGGAAAAG----------TCCGGGGCCTGCCCCTGCCACACCCGACACCCC-----GGGAAAGAGCCCTCAGCTCCCCTCTGCCCTGC-TGGGGGCTCCTGACCC-----------------GAGGCGGGCGGT-GTACAGTTGTGCTGCCAGGTG------GGAAGGTGTC-----------CCCAG--------AAGGCAGCAGGCCTGGTGCTGGGTCCTTTCtcagtcctcggcaccaccttgccaggcaggtattgtcatcccacccgacagatgaagagctgagatgcagaggttcggcagcccctctgagctcaGGGGTCAGCGAGGAGCTGCCTTCCCAGGAGCCCCCGGGCTGCCT----------------------------------GGGCACCT-TGCAGGGGCCTGGGTGGGGGGGCTCTCCTTCACTTG-CCACACTCAG-CTCTGCTCCG-GAGCAACCCCAGCCC---AGTGATCAG-CTCCCCCAGGCCGGCGGCCAGGCCACAGCAAGAAGATGGGCATCCTGGGTTTGGGGGA-GTATTTAGCTCATGTGGACGTTGCCTCTGGGGGTGGG-GGAGCGA-GTGAACCTCAGTCCGCAAAGGCAGGAGGCCCAGAGCAAGCCC-ATGGCCTCAGTGCCCGCAGAGCTGCCCCCAAGCCCCCAGCTTCGACAGGAGA----CTGTGATTCGGGATTCCTGCTCTTCCCACACCCTCCCCTTACTGTCACGGCCACTGTGGGTTGGGCCAAGGCTCCAGGCCTCCCTCGTAGGCCCCTGGTCACT----GCTCTGCCTGGGTCCCGCTGAGA---------------------------------------------TGCCCTCATCGGAGC-ACGGGGATCCCCATGCACCCCA- i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e calJac3.chr5 126523284 267 + 159171411 I e panTro4.chr17 76238727 1309 + 82630442 M a score=119571.000000 s hg38.chr17_GL383566v1_alt 49466 125 + 90219 -GGCCCCTCCCACAGGCGCCATATGGCTATTCCCCTCAGAGACGCACCAGGCCAGCCCC-ACTGCCCTCAGGACCAACCTCCAACTTCTCCTCGGC---TTGGGATCTCCGGTTTCTCTCTTTGTCAAGG s ponAbe2.chr17 67338491 125 + 73212453 -GCCTCCTCCCACGGGCGCCATACGGCTATTCCCCTCAGAGATGCACCAGGCCAGCCCC-ACTGCCCTCAGGACCAACCTCCAACTTCTCCTCGGC---TTGGGATCTCCGGTTTCTCTCTTTGTCAAGG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74834509 124 + 80904711 -g-cccctcccgcaggcaccatatggctattcccctcagagatGCCCCAGGCCAGCCCT-ACTGCCCTCAAGATCAACCTCCAACTTCTCCTCGGC---TTGGGATCTCCCGTTTCTCTCCTTGTCAAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74642429 125 + 80997621 -gccccctcccgcaggcaccatatggctattcccctcagagatgccccaggccagccct-actgccctcaagatcaacctccaacttctcctcggc---ttgggatctcccgtttctctccttgtcaagg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68650034 125 + 74645514 -GCCACCTCCCACGGGCACCATATGGCTATTCCCCTCAGAGATGCCCCAGGCCAGCCCC-ACTGCCCTCAAGATCAACCTCCAACTTCTCCTCGGC---TTGGGATCTCCCGTTTCTCTCCTTGTCAAGg i papAnu2.chr16 C 0 C 0 s canFam3.chr9 57416758 123 - 61074082 GGCCACCCCCCA-GGGTGCCCTAGAGCTGTTCCCTCCAG---TGCGTGGGGCCAGCCCCTGCTAACCTCCC-ACCGACCTCTGTCCTCTTGTCTGCACACAGAGAACCCC--TCTCGCTCTCTCTCAAGG i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e calJac3.chr5 126523284 267 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=80782.000000 s hg38.chr17_GL383566v1_alt 49591 93 + 90219 CACCCtgatatggttcggctctgttcccacccaaatctc-atctcgatttgt-atccccacgtgtcaagggagggacctgtaatccccatgtgtc s ponAbe2.chr17 67338616 94 + 73212453 CACCCtgatatggttcagctctgttcccacccaaatctcaatctcgatttgt-atccccacgtgtcaagggagggacctgTAATCCCCACGTGtc i ponAbe2.chr17 C 0 I 24 s rheMac3.chr16 74834633 94 + 80904711 CACCCtgatatggtttggctctgttcccacccaaacctc-atctcgatttataatccccacgtgtcaagggagggacctgtaatccccaggtgtc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74642554 94 + 80997621 caccctgatatggtttggctctgttcccacccaaacctc-atctcgatttataatccccacgtgtcaagggagggacctgtaatccccaggtgtc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68650159 94 + 74645514 caccctgatatggtttggctctgttcccacccaaatctc-atctcgatttataatccccacgtgtcaagggagggacctgtaatccccaggtgtc i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57416881 0 - 61074082 C e calJac3.chr5 126523284 267 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=12127.000000 s hg38.chr17_GL383566v1_alt 49684 22 + 90219 gagggagggaggtgattggatt s rheMac3.chr16 74834727 22 + 80904711 aagggagggaggtgattggatt i rheMac3.chr16 C 0 I 298 s macFas5.chr16 74642648 22 + 80997621 aagggagggaggtgattggatt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68650253 22 + 74645514 gagggagggaggtgattggatt i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57416881 0 - 61074082 C e ponAbe2.chr17 67338710 24 + 73212453 I e calJac3.chr5 126523284 267 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=109298.000000 s hg38.chr17_GL383566v1_alt 49706 446 + 90219 atgggggcgg-ttcccccatgctgttctcaggacggtgagtgagtgagttctcacgacatctggtggttttataagtgtttggcaagttccttcgctcactcttctctctcctgccaccttgtgaaggaggtatttgcttccccttcaccttccgccatgactgtaagtttcctgaggccttcccagccatgcaaaactgtgagtcaattaaacctctttcccggccgggcgtgatggctcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcacttgaggtcaggagttcgagaccagcctggccaacata--gaaaccccatctctactaaaaatacaaaaaattagctgagtgtggtggcgggcgcctgtaattccagctactcaggaggctgaggcaggagaatcactggaacccagaagacggaggttgcgg s macFas5.chr16 74642670 439 + 80997621 ttgccggtggtttcccccgtgctgttctcaggacggtgagtgagtgagttcttatgacctctggtggttttataagcgtttggcaagttcct----tcactcgtctctctcctgccaccttgtgaaggaggtacttgctttc------ccttctgccatgattggaagtttcctgaggcctccccagccatgcggaactgtgagtcaattaaacctctttcctggccaggcgcggtggctcctgcctgtaatcccagcactttgggaagcccaggtaggtggatcccttgaggtcaggagttccagaccagcctggccaacatagtgaaaccccatctctactaaaaattcaaaacattagctgagcgtggtggcaggtgcctgtaattccagctactcaggaggctgaggcaggagaatcactggaacctggaagacagaggttgtgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68650275 439 + 74645514 ttggtggtggtttcccccatgctgttctcaggacggtgagtgagtgagttcttatgacatctggtggttttataagcgtTTGGCAAGTTCCT----TCACTcgtctctctcctgccgccttgtgaaggaggtacttgctttc------ccttctgccatgattggaagtttcctgaggcctccccagccatgcggaactgtgagtcaattaaacctctttcctggccaggcgcggtggctcctgcctgtaatcccagcactttgggaagcccaggtaggtggatcccttgaggtcaggagttccagaccagcctggccaacatagtgaaaccccatctctactaaaaattcaaaacagtagctgagcgtggtggcaggtgcctgtaattccagctactcaggaggctgaggcaggagaatcactggaacctggaagacagaggttgtgg i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57416881 0 - 61074082 C e rheMac3.chr16 74834749 298 + 80904711 I e ponAbe2.chr17 67338710 24 + 73212453 I e calJac3.chr5 126523284 267 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=41725.000000 s hg38.chr17_GL383566v1_alt 50152 90 + 90219 tgagccaagatcatgccattgcactccagcctgggcaacaagagggaaactccatctcaaaataaataaataaataaaaataaaaacaaa s rheMac3.chr16 74835047 81 + 80904711 tgagccaagatcatgccattgcactccagcctgggcaacaagagtgaaactccatctcagaa---------aaacaaaaacaaaaacaaa i rheMac3.chr16 I 298 C 0 s macFas5.chr16 74643109 81 + 80997621 tgagccaagatcatgccattgcactccagcctgggcaacaagagtgaaactccatctcagaa---------aaacaaaaacaaaaacaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68650714 81 + 74645514 tgagccaagatcatgccattgtactccagcctgggcaacaagagtgaaactccatctcaaaa---------aaacaaaaacaaaaacaaa i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57416881 0 - 61074082 C e ponAbe2.chr17 67338710 24 + 73212453 I e calJac3.chr5 126523284 267 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=54919.000000 s hg38.chr17_GL383566v1_alt 50242 72 + 90219 agacccctttccattataaattacccagtctcagggaatttctttatagcagcatgagaatggactaagata s rheMac3.chr16 74835128 72 + 80904711 aaacctctttctcttataaattacccagtctcagggaatttctttatagcaggatgagaacggactaagaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74643190 72 + 80997621 aaacctctttctcttataaattacccagtctcagggaatttctttatagcaggatgagaacggactaagaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68650795 72 + 74645514 aaacctctttctcttataaattacccagtctcggggaatttctttatagcagcatgagaacggactaagaCA i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126523551 68 + 159171411 aaacctctttcctttataaatg----agtctcagggaagttctttatagtagcatgagaacgaactaataca i calJac3.chr5 I 267 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57416881 0 - 61074082 C e ponAbe2.chr17 67338710 24 + 73212453 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=594672.000000 s hg38.chr17_GL383566v1_alt 50314 667 + 90219 CACCCCTCCTTCATCCG---------------CCATGTGCAGC----CGGCGAGCACAGCTCTTCTGaagagacaggaggtacccacgtctcacatcagcttctgccctgtgccctgcacaaaatccctgaCATCTTAGAAT-ACGGCCTGGGAAAATATG--GAGGGTATGAATAAATCAGAATCTT-GAGAATCATCCCCGTGCAGGGG-CCTTCTGCAGCCAGGTGGCCCCTGGGGGCTATGGGTGTCCCCTGGAGGGAGCAAGGGAATGGTCTGCC-TTGGGGACAGTAAGGC---------AGTGCAGTTATGGGACTGCCAAGGTTGGTCT---------CTTCTAGGGCTCTTCGGCCTCTGGTGGGTTCCCGTGTTTGTAGGGGCTGCTCAGAGGGACCATAGCTGGGGT-----------------AGAGCGAGATGCCCCAGGAACAATGATCTCCAGCTGTCGCAGCTGTTAAATGGACATTTATGAAAACAAACCATCAGCGCCATCAGGAGCCAGGATTGTCCCTTCTTTCTATTCTGCAGGAGCGTGCATCACCTGTGAGCTTTGGATCACCGAGACTGTGGGTCCTGACCCATTATTCATGCATTTGTAGAATTTCCT-GGGGGCCACAGAAACTGGCCTGAGGACCATACTTGCCAATCCTCAGTGCCCAGAGAACGAGGTGAACAAGTAATCCTGCTCC--ttttatcttttt s rheMac3.chr16 74835200 685 + 80904711 CACCCCTCCCTCATCCA---------------CCATGTGCAGC----cagcgagcacagctcttctcaagagacaggaggtacccatgtctcacatcagcttctgccctgtgccctgcacaaaatccctgGCATCTTAGAAT-AGGGCCTGGGAAAATATAGAGAGAGTATGACTAAATTAGAATCTT-GAGAATCATCCCCGTGCAGGGG-CCTTCTGCAGCCAGGTGGCCCCTTGGGGCTATGGGGGTCCCCTGGAGGGAGCAAGAGAACCATCTGCC-TTGGGGACAATAAGACAGG-AATTTAGTGCAGTTATGGGACTGCCAAAGTTGGTCCCTTCTAGGGCTTCTAGGGCTCTTCAGCCTCTGGTGCGTTCCCGTGTTTGTAGGGGCTGCTCAGAGGGACCATAGTTAGGGT-----------------AGAGCGAGATGCCCCAGGAACAATCACCTCTAGCTGTCGCAGCTGTTAAATGGACATTTATGAAAACAAACCATCAGCGCCACCAGGAGCCACGACTGTCCCTTCTTTCTGTTCTGCAGGAGCGTGCATCACCTGTGAGCTTTGAATCACCGAGACTGTGGGTCCTGACCCATTATTCATGCATTTGCAGCGCGTCCT--GGGGCCACAGAAACTGGCCTGAGGACCACACTTGCCAACACTCAGTGCCCAGAGAAAGAGGTGAACAAGCAATCCTGCTCC--ttttattttttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74643262 685 + 80997621 cacccctccctcatcca---------------ccatgtgcagc----cagcgagcacagctcttctcaagagacaggaggtacccatgtctcacatcagcttctgccctgtgccctgcacaaaatccctgGCATCTTAGAAT-AGGGCCTGGGAAAATATAGAGAGAGTATGACTAAATTAGAATCTT-GAGAATCATCCCCGTGCAGGGG-CCTTCTGCAGCCAGGTGGCCCCTTGGGGCTATGGGGGTCCCCTGGAGGGAGCAAGAGAACCATCTGCC-TTGGGGACAATAAGACAGG-AATTTAGTGCAGTTACGGGACTGCCAAAGTTGGTCCCTTCTAGGGCTTCTAGGGCTCTTCAGCCTCTGGTGCGTTCCCGTGTTTGTAGGGGCTGCTCAGAGGGACCATAGTTAGGGT-----------------AGAGCGAGATGCCCCAGGAACAATCACCTCTAGCTGTCGCAGCTGTTAAATGGACATTTATGAAAACAAACCATCAGCGCCACCAGGAGCCACGACTGTCCCTTCTTTCTGTTCTGCAGGAGCGTGCATCACCTGTGAGCTTTGAATCACCGAGACTGTGGGTCCTGACCCATTATTCATGCATTTGCAGCGCGTCCT--GGGGCCACAGAAACTGGCCTGAGGACCACACTTGCCAACACTCAGTGCCCAGAGAAAGAGGTGAACAAGCAATCCTGCTCC--ttttattttttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68650867 678 + 74645514 CACCCCTCCCTCATCCA---------------CCATGTGCAGC----CAGCGAGCACAGCTCTTCTCAAGAGACAGGAGGTACCCATGTCTCACATCGGCTTCTGCCCTGTGCCCTGCACAAAATCCCTGGCATCTTAGAAT-AGGGCCTGGGAAAATATGGAGAGAGTATGAGTAAATTAGAATCTT-GAGAATCATCCCCGTGCACGGG-CTTTCTGCAGCCAGGTGGCCCCTGGGGACTATGGGGGTCCCCTGGAGGGAGCAAGAGAACCATCTGCC-TTGGGGACAATAAGGCAGG-AATTTAGTGTAGTTATGGGACTGCCAAAGTTGGTCC---------CTTCTAGGGCTCTTCAGCCTCTGGTGCGTTCCCGTGTTTGTAGGGGCTGCTCAGAGGGACCATAGTTGGGGT-----------------AGAGCGAGATGCCCCAGGAACAATCACCTCTAGCTGTCGCAGCTGTTAAATGGACATTTATGAAAACAAACCATCAGCGCCACCAGGAGCCACGACTGTCCCTTCTTTCTGTTCTGCAGGAGCGTGCATCACCTGTGAGCTTTGAATCACCGAGACTGTGGGTCATGACCCATTATTCATGCATTTGCAGCGCGTCCT--GGGGCCACAGAAACTGGCCTGAGGACCACACTTGCCAACACTCAGTGCCCAGAGAAAGAGGTGAACAAGCAatcctgctcctttttttttttttt i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126523619 692 + 159171411 CA-CCCTCCCTCACCCATCGTGCATACCCCGCCCCTGTGCGGC----CAGCGAGCACAgctcttgtaaagaggcaggagggacccctgtctcatattagcttctgctttgtgccctgcgcaaaatccctgaCATCTTAGAAC-GGGGGCTGGGAAAATATGGAGAGAATATGAATGAATTAGAGTCTT-GGGAATCATCCTCTCGAAGGGG-TCTAGCGAAGCCAGGCAGCCCCTGGGGACTATGGATGTCCCCTGGAGGGAGCAAGGGAACAGTTTGCC-TTGGGGACAGCAAGGCAGGCGATTCAGTGCAGGTACAGGATGGCCAAA-TTGGTCT---------CCTCTAGGGCTCTTCAGCCTCTGGTGGGTTCCTGTGTTTGCAGGGGCTGCTCGGAGGGACCATATCTAGGGT-----------------AGAGCCAGATGCCCCGTGAATGATGACCTCTAGCTGTCACAGCTGTTAAATGGATGTTTATGAAAACACACCCTCAGTGCCACCAGGAGCCATGACTTTCCTTTCTTTCTATTCTAAAGGAGTATGCATCACCTGTGAGCTCCAGATCACCAGAACAGTGGGTCATGACCCATTATTCATGCATTTGCAGAATGTCCTGGAGGGCCGCAGAAACTGGCCTAAGGACCGCACTTGCCAACCCTCTGTGCCCAGGGAAAGAGGCGAACAAGGAATCCGGCTCC--tttatttttttc i calJac3.chr5 C 0 C 0 s canFam3.chr9 57416881 587 - 61074082 CACCCCTCCCTCCTGCG---------------CCCCGCACCCCCACGCAGCCAGCAGAACTCTTCCTGAAAGGCAGGAGGGAACACTGTTTTCCATCAATGTCTGCTTCACGCCCTGCCCCGAAATCCTGACACCTTAGGATCGGGGTTTGGGGAACTAGAGGGAGAACATGTGTAAATTAAAGTCTTGGAAAATCCTCCCCACGCAGGGGCCCTTGGGCAGCCCGCTGGTCCCT-GGGGCTGTGGGCGTTGCC----GTGAGCTAAGGACCGGTCCGCCGTGGGGGATCATAAGGC----GATGTA--GCAGTGACAGGACTGCCTGGGTCGGTCC---------------------------CTCTGGGGGGGTCCCATGTTTGTCCGGGC-GCTGGAAGGGGCCACA--TGGAGTAACCTGGGAGCGCACGGAAAGCCAGGGGCCCGGAGAGC--TGATCTC-AGCTCACGTAA-TGTT------GCGTTTACGAAAGCGACCC------GAGGACAGCTGCCACGA-----CCACCTTTCTGTCCAGAAGGCGAG-----------------------------------------------------------TTTGCAGGGCGTCCT-GGGGGCTGCAGGTGTGAGGATGAGGACGGTGCTTGGCAGCTCCCAGTGCTCAGA----GGGGTGGGCAATGAATTGTCCTTT--TTTTTTtttttt i canFam3.chr9 C 0 I 3271 e nomLeu3.chr14 3664992 102 - 94967081 I e ponAbe2.chr17 67338710 24 + 73212453 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=205958.000000 s hg38.chr17_GL383566v1_alt 50981 267 + 90219 gagacggaatctcgctctatcacccaggctggagtgtggtagcatggtctcaccacaacctccgcctcccaggttcaagtgattctcctgcctcagcctcccgagtagctggtactacaggctcccgccaccacacccagcaaatttttgaatttttagtagagatggggtttcaccgtgttggccaggctggtctggaagtcctgacctcaagtaatctgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccact s rheMac3.chr16 74835885 266 + 80904711 gagatggaatctcgccctgtcacccaggctggagtgtggtagcatggtctcaccacaacttctgcctcctagg-tcaagtgattctcctgcctcagcctcccgagtagctggtattacaggtgcacaccaccacacctggctaatttttgaatttttagtagagatggggtttcaccatgttggccgggctggtctcgaacgcctgacctcaagtgatctactcgccttagcctcccaaagcgctgggattacaggtgtgagccacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74643947 266 + 80997621 gagatggaatctcgccctgtcacccaggctggagtgtggtagcatggtctcaccacaacttccgcctcctagg-ttaagtgattctcctgcctcagcctcccgagtagctggtattacaggtgcacaccaccacacctggctaattgttgaatttttagtagagatggggtttcaccatgttggccgggctggtctcgaacgcctgacctcaagtgatctactcgccttagcctcccaaagcgctgggattacaggtgtgagccacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68651545 266 + 74645514 gagatggaatctcgccctgtcacccaggctggagtgcggtagcatggtctcaccacaacttccgcctcctagg-tcaagtgattctcctgcctcagcctcccgagtagctggtattacaggtgcacaccaccacacctggctaatttttgaatttttagtagagatggggtttcaccatgttggccgggctggtctcgaactcctgacctcaagtgatctacttgctttagcctcccaaagcactgggattacaggtgtgagccacc i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126524311 260 + 159171411 aagacagagtcttgctctgttgccc-------actgcagaggtgtgatctctctgcaacctccatctcccaggttcaagtgattctcctgcctcagcctccccagtagctaagactacaggcacccgccaccacacccagccaatttttgtatttttagtagagatggagtttcaccatgttggctgggctggtcttgaattcctgacctcaagtgatctgcccaccttggcctcccaaagtgctgggattacaggtataagccacT i calJac3.chr5 C 0 I 407 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57417468 3271 - 61074082 I e ponAbe2.chr17 67338710 24 + 73212453 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=99096.000000 s hg38.chr17_GL383566v1_alt 51248 193 + 90219 gcacccggccTGtttcatctatattgttctttaccacactctcggtgacatcagccaactaacttattctctcttcaatgtatccagccaactacattctgtctgttggcttcttaatttcaataattacacctttTGCACACAGACCACAACAGGGTGAAAAATGTA----ATATATAAATACTAAAATGTAAAGC s rheMac3.chr16 74836151 193 + 80904711 acacccagccTGTTTCATCTATATTGTTCTTTGCCACACTCTCAGTGACATCAGCCAACTAAC---TTCTCTCTTCAATGTATCCAGCCAACTACATTCTGTCTGTTGGCTTCTTAATTTCAATAATCATACCTTTTGCACACAGACCACAA-AGGGTGAAAAATGTAAAATAAATATAAATACTAAAATGTAAAGt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74644213 193 + 80997621 acacccagccTGTTTCATCTATATTGTTCTTTGCCACACTCTCAGTGACATCAGCCAACTAAC---TTCTCTCTTCAATGTATCCAGCCAACTACATTCTGTCTGTTGGCTTCTTAATTTCAATAATCATACCTTTTGCACACAGACCACAA-AGGGtgaaaaatgtaaaataaatataaatactaaaatgtaaaGt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68651811 193 + 74645514 acacccagcctgtttcatCTATATTGTTCTTTGCCACACACTCAGTGACATCAGCCAACTAAC---TTATCTCTTCAATGTATCCAGCCAACTACATTCTGTCTGTTGGCTTCTTAATTTCAATAATCATACCTTTTGCACACAGACCACAA-AGggtgaaaaatgtaaaataaatataaatactaaaatgtaaagt i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57417468 3271 - 61074082 I e ponAbe2.chr17 67338710 24 + 73212453 I e calJac3.chr5 126524571 407 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I e panTro4.chr17 76238727 1309 + 82630442 M a score=99826.000000 s hg38.chr17_GL383566v1_alt 51441 118 + 90219 ------tttttttttttttttttttttgagacagggtctcactctgtcacccaggctgaagtgcagtggtacaatcatagctcactacaacctcaaacttctgg--gatccaatgattctcctgcc s panTro4.chr17 76240056 118 + 82630442 ------tttttttttttttttttttttgagacagggtctcactctgtcacccaggctgcagtgcagtggtacaatcatagctcactacaacctcaaacttcggg--gatccaatgattctcctccc i panTro4.chr17 M 1309 C 0 s rheMac3.chr16 74836344 126 + 80904711 ttattttattttatttttttattttttgagacagggtctcaccctatcacccaggctgaagtgcagtggcacaatcatagctcactacaacctcaaacttctggaaaaaccagtgattctcctgcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74644406 124 + 80997621 ttattttattttatttttttattttttgagacagggtctcaccctatcacccaggctgaagtgcagtggcacaatcatagctcactacaacctcaaacttctgg--gatccagtgattctcctgcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68652004 124 + 74645514 ttattttattttatttttttattttttgagacagggtctcaccctgtcacccaggctgaagtgcagtggcacaatcatagctcactacaacctcaaacttctgg--gatccagtgattctcctgcc i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3664992 102 - 94967081 I e canFam3.chr9 57417468 3271 - 61074082 I e ponAbe2.chr17 67338710 24 + 73212453 I e calJac3.chr5 126524571 407 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I a score=474829.000000 s hg38.chr17_GL383566v1_alt 51559 403 + 90219 tcagcctcccaagtagctgagactacaggtatgcatcaaccacacccagctaattttaaatttttttt-tgtagagatgaggtctcactttgtcacccaggctgatctcaaactcctgggctcaagcaatctgcccaccttggcctcccaaagtgctgggaatacaggtgtaagccaccatgcctggccCATGAAAAACATTTTTTAAAAAGAGAATATAAAAAAATTTTAGAAG---GAAGAA------AAAACTAAAATAAATaaaaatcatacctttaacttccaggatttctcactgattatttttcgtgaccacctgttcttattt-----aagccagttttt-------tttgttttttt---tgtgttt-ttttttagacagagtgtcactctgtcacccaggctggagtgcggtggcgtga s panTro4.chr17 76240174 414 + 82630442 tcaccctcccaagtaactgaaactacaggtatgcatcaaccacccccagctaattttaaatttttttt--gtagagatgaggtctcactttgttacccaggctgatctcaaactcctgggctcaagcaatctgcccaccttggcctcccaaagtgctgggaatacaggtgtaagccaccatgcctggccCATGAAAAACATTTTTTAAAAAGAGAATATAAAAAAATTTTAGAAGAAGGAAGAA------AAAACTAAAATAAATaaaaatcatacctttaacttccaggatttctcactgattatttttcgtgaccacctgttcttatttcatttaagccagttttg-------tgtgtgtgtgtgtgtgtgtgtgttttttagatggagtgtcactctgtcacccaggctggagtgcggtggcgtga i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3665094 411 - 94967081 tcagcctcccaagtagctgagactacaggtatgcatcaaccatacccagctaattttgaattttttttttgtatagatgaggtctgactttgttacccaggctgatctcaaactcctgggctcaagcaatctgcccgccttgacctcccaaagtgctgggaataca-gtgtaagtcaccatgcctggccCATGAAAAACATTTTTTTAAAAAAGAATATAAAAAAAGTTTAGAAGAAGGAAGAAAAAACTAAAACTAAAATAAATAAAAATCACACCTGTAacttccaggatttctcactgattatttttcatgaccacctgttcttattt-----aagccagttttt-------tttgttttt-----tgtgttgtttttttagaaggagtgtcactgtgtcgcccaggctggagtgcagtggcatga i nomLeu3.chr14 I 102 C 0 s rheMac3.chr16 74836470 409 + 80904711 tcagtctcctaagtagctgggactacaggtatgcatcaaccacacccagctaattttaaatttttttt--gtagagatgaggtctcactatgttacccaggctgatctcaaactcctgggctcaagcagtcagcccaccttggcctcccaaagtgctgggaatacaggtgtaagccaccatgcctggccCATGTAAAGCATTTTTAAAAAATAGAAGA-GAAAAAATTTTAGAAG---GAAGAAAAAACTAAAAATAAAATAAATaaaaatcatacctttaacttccaggatttatcactgattatttttcatgaccacctgttcttatttcatttaagccagttt---------tttgtttgtt----tgtttgt-ttttttagacggagtgttgctctgtcgcccaggctggggtgcagtggcgtga i rheMac3.chr16 C 0 I 535 s macFas5.chr16 74644530 409 + 80997621 tcagtctcctaagtagctgggactacaggtatgcatcaaccacacccagctaattttaaatttttttt--gtagagatgaggtctcactatgttacccaggctgatctcaaactcctgggctcaagcagtcagcccaccttggcctcccaaagtgctgggaatacaggtgtaagccaccatgcctggccCATGTAAAGCATTTTTAAAAAATAGAAGA-GAAAAAATTTTAGAAG---GAAGAAAAAACTAAAAATAAAATAAATAAAAATCATACCTTTAACTTCCAGGATTTATCACTTATTATTTTTCATGACCACCTGTTCTTATTTCATTTAAGCCAGttt---------tttgtttgtt----tgtttgt-ttttttagacggagtgttgctctgtcgcccaggctggggtgcagtggcgtga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68652128 418 + 74645514 tcagcctcctaagtagctgggactacaggtatgcatcaaccacacccagctaattttaaatttttttt--gtagagatgaggtctcactatgttacccaggctgatctcaaactcctgggctcaagcagtcagcccaccttggcctcccaaagtgctgggaatacaggtgtaagccaccatgcctggcccatgtaaagcatttttaaaaaatagaaga-gaaaaaattttagaag---gaagaaaaaactaaaaataaaataaataaaaatcatacctTTAACTTCCAGGATTTATCACTGATTATTTTTCATGACCACCTGTTCTGATTTCATTTaagccagtttttttgtttgtttgtttgtt----tgtttgt-ttttttaggcggagtgttgctctgtcgcccaggctagagtgcagtggcgtga i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57417468 3271 - 61074082 I e ponAbe2.chr17 67338710 24 + 73212453 I e calJac3.chr5 126524571 407 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I a score=152209.000000 s hg38.chr17_GL383566v1_alt 51962 187 + 90219 tctcggctcactgcaacctctgcctcccaggttccagcagttctcctgcctcagcctcctgagtagctgggactacaggtgagcgccaccgcacctagctaatttttta---tatttttagtaaagacggggtttgcaccatattgaccgggctggtctcgaactcctgacctcgtgatttgcctgcctg s panTro4.chr17 76240588 187 + 82630442 tctcggctcactgcaacctctgcctcccacgttccagcagttctcctgcctcagcctcctgagtagctgggactacaggtgagcgccaccggacctagctaatttttta---tatttttagtaaagatggggtttgcaccatattggccgggctggtctcgaactcctgacctcgtgatttgcctgtctg i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3665505 187 - 94967081 tctcggctcactgcaacctctgcctcccgggttcaagcagttctcctgcctcagcctcctgaatagctgggactacaggtgagtgccaccacacctagctaatttttta---tatttttagtagagacggggtttgcaccatattggccgggctggtctcgaactcctgacctcgtgatttgcctgcctg i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74644939 184 + 80997621 tctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacacaccaccatacctggctaatttttta------ttttagtagagacggggtttgcaccatattggccaggctggtctcaaactcctgacctcatgatctgcctgcctt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68652546 190 + 74645514 tctcagctcactgcaacctctgcctcccaggttcaagtgattctcttgcctcagcctcctgagtagctgggattacaggcgagcaccaccatacctggctaatttttaattatatttttagtagagatggggtttgcaccatattggccaggctggtctcaaactcctgacctcatgatctgcctgcctt i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57417468 3271 - 61074082 I e rheMac3.chr16 74836879 535 + 80904711 I e ponAbe2.chr17 67338710 24 + 73212453 I e calJac3.chr5 126524571 407 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I a score=53403.000000 s hg38.chr17_GL383566v1_alt 52149 48 + 90219 ggcctcccaaaatgctgggattataggcatgagccactgcgcctggcc s panTro4.chr17 76240775 48 + 82630442 ggcctcccaaaatgctgggattataggcatgagccactgcgcctggcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67338734 48 + 73212453 ggcctcccaaagtgctgggattacaggcttgacccaccgcacctggcc i ponAbe2.chr17 I 24 C 0 s nomLeu3.chr14 3665692 48 - 94967081 ggcctcccaaagtgctgggattataggtacgagccaccgcgcctggcc i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74645123 47 + 80997621 ggcctcccaaagtgctgggattacaggtgtgagtcactgtgcccag-c i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68652736 47 + 74645514 ggcctcccaaagtgctgggattacaggcatgagtcactgtgcccgg-c i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57417468 3271 - 61074082 I e rheMac3.chr16 74836879 535 + 80904711 I e calJac3.chr5 126524571 407 + 159171411 I e chlSab2.chr16 30703760 498 - 75148670 I a score=203092.000000 s hg38.chr17_GL383566v1_alt 52197 117 + 90219 ttaagccagttttggttttacaacttcttgttttc-tttgatgatcctaaacattttaatttgaaatcattttcagattcttccgttatttccatttcacctgcaatgatttaagggt s panTro4.chr17 76240823 117 + 82630442 ttaagccagttttggttttacaacttcttgttttc-tttgatgatcctaaacattttaatttgaaatcattttcagattcttccattatttccatttcacctgcaatgatttaagggt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67338782 117 + 73212453 TTAAGCCAGTTTTGGTTTTACAACTTCTTGTTTTC-TTTGATGATCCTAAACATTTTAATTTGAAATCATTTTCAGATTCTTCTGTTATTTCCATTTCACCTGCAGTGATTTAAGGGT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3665740 116 - 94967081 ttaagccagttttggtttta-aacttcttgttttc-tttgatgatcctaaacattttaatttgaaatcattttcagattcttccgttatttccatttcacctgcagtgatttaagggt i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74645170 118 + 80997621 TTAAACCAGTTTTGGTTTTATAACTTCTTGTTTTCTTTTGATGATCCTAAACATTTTAATTTGAAATCATTTTCCAATTCTTCCGTTATTTCCATTTCACCTGCAGTGATTTAAGGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68652783 118 + 74645514 ttaaACCAGTTTTGGTTTTAtaacttcttgttttcttttgatgatcctaaacattttaatttgaaatcaTTTTCCGATTCTTCCGTTATTTCCATTTCACCTGCAGTGATTTAAgggc i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126524978 116 + 159171411 TTAAGTCAGTTTTGGTTTTACAACTTCTCACTTTC--TTGATGATCCTAAACATTTTAATTTGAGATCATGTTCAGATGCTTCTGTTGTTTCCATTTTACCTGCAGTGATTTAAGGGT i calJac3.chr5 I 407 C 0 e canFam3.chr9 57417468 3271 - 61074082 I e rheMac3.chr16 74836879 535 + 80904711 I e chlSab2.chr16 30703760 498 - 75148670 I a score=9590.000000 s hg38.chr17_GL383566v1_alt 52314 4 + 90219 tgat s panTro4.chr17 76240940 4 + 82630442 tgat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67338899 4 + 73212453 TGAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3665856 4 - 94967081 tgat i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74645288 4 + 80997621 TGAt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68652901 4 + 74645514 tgat i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126525094 4 + 159171411 TGAT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57420739 4 - 61074082 tggt i canFam3.chr9 I 3271 C 0 e rheMac3.chr16 74836879 535 + 80904711 I e chlSab2.chr16 30703760 498 - 75148670 I a score=3231.000000 s hg38.chr17_GL383566v1_alt 52318 2 + 90219 tt- s panTro4.chr17 76240944 2 + 82630442 tt- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67338903 2 + 73212453 TT- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3665860 2 - 94967081 tt- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837414 2 + 80904711 TT- i rheMac3.chr16 I 535 C 0 s macFas5.chr16 74645292 2 + 80997621 tt- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68652905 2 + 74645514 tt- i papAnu2.chr16 C 0 I 320 s chlSab2.chr16 30704258 2 - 75148670 TT- i chlSab2.chr16 I 498 C 0 s calJac3.chr5 126525098 2 + 159171411 TT- i calJac3.chr5 C 0 C 0 s canFam3.chr9 57420743 2 - 61074082 -tg i canFam3.chr9 C 0 C 0 a score=39677.000000 s hg38.chr17_GL383566v1_alt 52320 18 + 90219 tt-cttaattgtctttatt s panTro4.chr17 76240946 19 + 82630442 tttcttaattgtctttatt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67338905 17 + 73212453 G--CTTAATTGTCTTTATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3665862 17 - 94967081 t--cttaattgtctttatt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837416 18 + 80904711 -TTCTTAATTGTCTTTATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74645294 18 + 80997621 -tctttctttctttttttt i macFas5.chr16 C 0 I 1788 s papAnu2.chr16 68653227 18 + 74645514 -TTCTTAattgtctttatt i papAnu2.chr16 I 320 C 0 s chlSab2.chr16 30704260 18 - 75148670 -TTCTTAATTGTCTTTATT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126525100 17 + 159171411 --TCTTCATCATCTTTATT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57420745 18 - 61074082 -atcttgattgtctttatc i canFam3.chr9 C 0 C 0 a score=239331.000000 s hg38.chr17_GL383566v1_alt 52338 99 + 90219 agcagcagctttg-ccatgtggttggggtgaggtgtgtaggtttgtcttgggtaaatgcctctctcatttcagtcaa--tctctgtctctctttcttcctct s panTro4.chr17 76240965 99 + 82630442 agcagcagctttg-ccatgtggttggggtgaggtgtgtaggtttgtcttgggtaaatgcctctctcatttcagtcaa--tctctgtctctctttcttcctct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67338922 99 + 73212453 AGCAGCAGCTTTG-CCATGTGGTTGGGGTGAGGTGTGTAGGTTTGTCTTGGGTAAATGCCTCTCTCATTTCAGTCAA--tctctctctctctttcttcctct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3665879 99 - 94967081 agcagcagctttg-ccatgtggttggggtgaggtgtgtaggtttgtcttgagtaaatgcctctctcatttaagtcaa--tctctctctctctttcttcctct i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837434 101 + 80904711 ACCAGCAGCTTTG-CCATGTGGTTGGGGTGAGGTGTGTAGGTTTATCTTGGGTAAATGCTTCTCTCATTTCAGTTAAtctctctctctctctttcttcctct i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 68653245 101 + 74645514 agcagcagcTTTG-CCATGTGGTTGGGGTGAGGTGTATAGGTTTATCTTGCGTAAATGCTtctctcatttcagttaatctctctctctctctttcttcctct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30704278 101 - 75148670 ACCAGCAGCTTTG-CCATGTGGTTGGGGTGAGGTGTGTAGGTTTATCTTGGGTAAATGTTTCTCTCATTTCAGTTAAtctctctctctctctttcttcctct i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126525117 95 + 159171411 AGCAGCAGCTTTG-CCATGTGGTCGGGGTGAGGTGTGTAGATTCATCTTGGGTAGATGCTCCTCTCATTTCAA------TCTCTGTCTCTCCCTCTTCCTCC i calJac3.chr5 C 0 I 18 s canFam3.chr9 57420763 75 - 61074082 ggcattagctttgcccaggttttggggatcaggtttgtaggttcgtcttgagttgatgtttctgtctccccagtc--------------------------- i canFam3.chr9 C 0 C 0 e macFas5.chr16 74645312 1788 + 80997621 I a score=2988.000000 s hg38.chr17_GL383566v1_alt 52437 13 + 90219 tcct------------cttcctctc-- s panTro4.chr17 76241064 25 + 82630442 tcctattcctcttcctctttctctc-- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339021 17 + 73212453 tcctattc--------ctctaattc-- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3665978 21 - 94967081 tcctattcctct----ttctaattc-- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837535 11 + 80904711 ------tc--------ctcttcctc-- i rheMac3.chr16 C 0 I 12 s papAnu2.chr16 68653346 17 + 74645514 tcctagtc--------ctcttcctc-- i papAnu2.chr16 C 0 I 12 s chlSab2.chr16 30704379 17 - 75148670 tcctattc--------ctcttcctc-- i chlSab2.chr16 C 0 I 12 s canFam3.chr9 57420838 10 - 61074082 -----------------tctccccctg i canFam3.chr9 C 0 C 0 e calJac3.chr5 126525212 18 + 159171411 I e macFas5.chr16 74645312 1788 + 80997621 I a score=20964.000000 s hg38.chr17_GL383566v1_alt 52450 7 + 90219 tctttct s panTro4.chr17 76241089 7 + 82630442 tctttct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339038 7 + 73212453 tctttct i ponAbe2.chr17 C 0 I 40 s nomLeu3.chr14 3665999 7 - 94967081 tctttct i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837558 7 + 80904711 tctttct i rheMac3.chr16 I 12 C 0 s macFas5.chr16 74647100 7 + 80997621 tctttct i macFas5.chr16 I 1788 C 0 s papAnu2.chr16 68653375 7 + 74645514 tctttct i papAnu2.chr16 I 12 C 0 s chlSab2.chr16 30704408 7 - 75148670 tctttct i chlSab2.chr16 I 12 C 0 s canFam3.chr9 57420848 7 - 61074082 tccgtct i canFam3.chr9 C 0 C 0 e calJac3.chr5 126525212 18 + 159171411 I a score=46367.000000 s hg38.chr17_GL383566v1_alt 52457 29 + 90219 cctcttttttgctctctctccccgcacct s panTro4.chr17 76241096 29 + 82630442 cctctttttttctctctctccccgcaccc i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3666006 29 - 94967081 cctctttttttctctctctccctgcactc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837565 29 + 80904711 cctctttttctctctctctcCCCCGACCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74647107 29 + 80997621 cctctttttctctctctctcCCCCAACCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68653382 29 + 74645514 tctctttttctctctctctcccccaacct i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30704415 29 - 75148670 cctctttttctctttctctcCCCCGACCT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57420855 27 - 61074082 --accctgattgtccagctgcctccacct i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67339045 40 + 73212453 I e calJac3.chr5 126525212 18 + 159171411 I a score=1362.000000 s hg38.chr17_GL383566v1_alt 52486 6 + 90219 --tctctc s panTro4.chr17 76241125 6 + 82630442 --tctctc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339085 6 + 73212453 --tctctc i ponAbe2.chr17 I 40 C 0 s nomLeu3.chr14 3666035 6 - 94967081 --tctctc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837594 4 + 80904711 ----TCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74647136 4 + 80997621 ----TCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68653411 4 + 74645514 ----tctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30704444 4 - 75148670 ----TCTC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57420882 6 - 61074082 ggcttc-- i canFam3.chr9 C 0 C 0 e calJac3.chr5 126525212 18 + 159171411 I a score=822230.000000 s hg38.chr17_GL383566v1_alt 52492 268 + 90219 cccc-actctct-----cccccaaatgg-----tgaggtcgtgtgttgttggctcagagttcccacctccc-gggggctactggggattttgctgtccgggtgctgag-tccctgggtgccagggctctgaggccatggctgctttct--cccctctccaggtaCACAGCTGGGAAGCCCTGTCCCCACCCCTAT-----GAGTGGCTCCAGTGCCCTGCCTCATTtttagtatctgttacatggagatggttatcttactttt-taaaaaattatggctatatctttt s panTro4.chr17 76241131 268 + 82630442 cccc-actctct-----ccccgaaatgg-----tgaggtcctgtgttgttggctcagagttcccacctccc-gggggctactggggattttgctgtccgggtgctgag-tccctgggtgccagggctctgaggccatggctgctttct--cccctctccaggtaCACAGCTGGGAAGCCCTGTCCCCACCCCTAT-----GAGTGGCTCCAGTGCCCTGCCTCATTtttagtatctgttacatggagatggttatcttactttt-taaaaaattatggctgtatctttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339091 268 + 73212453 cccc-actctct-----ctcCCAAATGG-----TGAGGTCGTGTGTTGTTGGCTCAGAGTTCCCACCTCCC-GGGGGCTACTGGGGATTTTGCTGTCCAGGTGCTGAG-TCCCTGGGTGCCAGGGCTCTGAGGCCATGGCTGCTTTCT--CCCCTCTCCAGGTACACACCTGGGAAGCCCTGTCCCCACCCCTAT-----GCATGGCTCCAGTGCCCTGCCTCATTTTTAGTATCTGTTACATGGAGATGGTTATCTTACTTTT-TAAAAAATTATGGCTATATCTTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3666041 263 - 94967081 cccc-actctct-----cccccaaatgg-----tgaggtcgtgtgttgttggctcagagttcccacctccc-gggggctactggggattttgctgtccacgtgctgag-tccctgggtgccagggctctgaggccatggctgctttct--cccctctccaggtaCACAGCTGGGAAGCCCTGTCCCCACCCCTAT-----GTGTGGCTCCAGTGCCCTGTCTCA-TTTTAGTGTCTGTTACAGGGAGATGGTTATCTTACTTTT-TAAAAAGTTATGGCTATATC---- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837598 268 + 80904711 CCCCAACTCTCT-----CCCCCACATGG-----TGAGGTCGTGTGTTGTTGGCTCAGAGTTCCCACCTCCT--GGGCCTACTGGGGATTTTGCCATCCAGGTGCTGAG-TCCCTGGGTGCCCGGGCTCTGAGGCCATGGCTACTTCCT--CCCCTCTCCAGGTACACGGCTGGGAAGCCCTGGCCCCACCCCTGT-----GTGTGGCTCCAGTGCCCTGCCTCATTTTTGGTGTCTGTTATATGGAGATGGTTATCTTACTTTT-TAAAAAATTATGGCTGTATCtttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74647140 268 + 80997621 CCCCAACTCTCT-----CCCCCACATGG-----TGAGGTCGTGTGTTGTTGGCTCAGAGTTCCCACCTCCT--GGGCCTACTGGGGATTTTGCCATCCAGGTGCTGAG-TCCCTGGGTGCCCGGGCTCTGAGGCCATGGCTACTTCCT--CCCCTCTCCAGGTACACGGCTGGGAAGCCCTGGCCCCACCCCTGT-----GTGTGGCTCCAGTGCCCTGCCTCATTTTTGGTGTCTGTTATATGGAGATGGTTATCTTACTTTT-TAAAAAATTATGGCTGTATCTTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68653415 267 + 74645514 tcccaactctct------ccccAAATGG-----TGAGGTCGTGTGTTGTTGGCTCAGAGTTCCCACCTCCC--GGGCCTACTGGGGATTTTGCCATCCAGGTGCTGAG-TCCCTGGGTGCCGGGGCTCTGAGGCCATGGCTACTTCCT--CCCCTCTCCAGGTACACGGCTGGGAagccctgtccccacccctgt-----GTGTGGCTCCAGTGCCCTGCCTCATTTTTGGTGTCTGTTATATGGAGATGgttatcttactttt-taaaacattatggctgtatctttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30704448 268 - 75148670 CCCCAACTCTCT-----CCCCCACCTGG-----TGAGGTCGTGTGTTGTTGGCTCAGAGTTCCCACCTCCT--GGGCCTACTGGGGATTTTGCCATCCAGGTGCTGAG-TCCCTGGGTGCCGGGGCTCTGAGGCCATGGCTACTTCCT--CCCCTCTCCAGGTACACAGCTGGGAAGCCCTGTCCCTACCCCTGT-----GTGTGGCTCCAGTGCCCTGCCTCATTTTTGGTGTCTGTTATATGGAGATGGTTATCTTACTTTT-TAAAAAATTATGGATGTATCTTTT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126525230 266 + 159171411 -------CCCCA-----TTCCAAAATGG-----TGAGGCTGTGTGTTGCTGGCTCGGAGCGCCCACCTCCT-GGGGG--ACTGGGGATTTTGCCATCCAGGTGCTGAG-TCCCTGGGCACCAGGGCTCTGAGGCCGTGGCTACCTCCT--CCCCTCTCCAGGTACATGGATGGGGAGCCCTGTTCCCACCCCTATGCAGAGCGTGGCTCCAATGCCATGCCATATTTTTAGTGTCTGTCACATGGAGATGGTTACCTTACTTTTAAAAAAAATTATGGCTATATCTTAT i calJac3.chr5 I 18 I 313 s canFam3.chr9 57420888 261 - 61074082 ----------ctgggggacccaatgtggaacaacgaagccatttgttgctggctcggagtgtccatctcctggggggatgttggg--------CACCCATCTGCTGAGCCCCCTGGGTCCCATGGCTCAGAAACTATGGTTGGTCTCTTCCCCTTCTCCAGGCACGTGGCTGGG-AGCCCTGCCCTGGCCCTCGCACA--GCACAACTCCAGC-CCGCACCTCC-TTTCGGTGCCTGTTACATGGAGACAGGGATCTGAATTTT-T----CTTCCAGATTATGTCTTTT i canFam3.chr9 C 0 C 0 a score=23106.000000 s hg38.chr17_GL383566v1_alt 52760 8 + 90219 aatttttt s panTro4.chr17 76241399 8 + 82630442 aatttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339359 8 + 73212453 AATTTTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3666304 6 - 94967081 --TTTTTT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74837866 8 + 80904711 aatttttt i rheMac3.chr16 C 0 I 309 s macFas5.chr16 74647408 8 + 80997621 AATTTTTT i macFas5.chr16 C 0 I 79 s papAnu2.chr16 68653682 8 + 74645514 catttttt i papAnu2.chr16 C 0 I 80 s chlSab2.chr16 30704716 8 - 75148670 AATTTTTT i chlSab2.chr16 C 0 I 79 s calJac3.chr5 126525809 8 + 159171411 AATTTCAT i calJac3.chr5 I 313 C 0 s canFam3.chr9 57421149 8 - 61074082 AAGTTTCT i canFam3.chr9 C 0 C 0 a score=151520.000000 s hg38.chr17_GL383566v1_alt 52768 51 + 90219 ctttttaaagtttatctgtctttgctatacgggatgacttgaaaaatgaac s panTro4.chr17 76241407 51 + 82630442 ctttttaaagtttatctgtctttgctatacaggatgacttgaaaaatgaac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339367 51 + 73212453 CTTTTTAAAGTTTATCTGTCTTTGCTATACAGGATGACTTGAAAAATGAAC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3666310 51 - 94967081 CTTTTTAAAGTTTATCTGTCTTTGCTATACAGGATGACTTGAAAAATGACC i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74647495 51 + 80997621 CTTTTTAAAGTTTATCTGCCTTTGCTATACAGGATGACTTGAAAAATGAAC i macFas5.chr16 I 79 I 178 s papAnu2.chr16 68653770 51 + 74645514 ctttttaaagtttatctgCCTTTGCTATACAGGATGACTTgaaaaatgaac i papAnu2.chr16 I 80 C 0 s chlSab2.chr16 30704803 51 - 75148670 CTTTTTAAAGTTTATCTGCCTTTGCTATACAGGATGACTCAAAAAATGAAC i chlSab2.chr16 I 79 C 0 s calJac3.chr5 126525817 49 + 159171411 CTTTTTAAAGTTTA--TGTCTTTGCTATGCAGGATGACTTGGAAAATGAAC i calJac3.chr5 C 0 C 0 s canFam3.chr9 57421157 51 - 61074082 CTTTTTATAGTTTATCTGCCTTTGCTATATGAGACGACTTGGAAAATGAAC i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74837874 309 + 80904711 I a score=2548.000000 s hg38.chr17_GL383566v1_alt 52819 1 + 90219 t s panTro4.chr17 76241458 1 + 82630442 t i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339418 1 + 73212453 T i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3666361 1 - 94967081 T i nomLeu3.chr14 C 0 C 0 s papAnu2.chr16 68653821 1 + 74645514 t i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 30704854 1 - 75148670 T i chlSab2.chr16 C 0 I 1 s calJac3.chr5 126525866 1 + 159171411 T i calJac3.chr5 C 0 C 0 s canFam3.chr9 57421208 1 - 61074082 T i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74837874 309 + 80904711 I e macFas5.chr16 74647546 178 + 80997621 I a score=878430.000000 s hg38.chr17_GL383566v1_alt 52820 267 + 90219 taaaatgccatc---ttTTTAATGCTTTAAATATTTTCTTTTATTGTGAGCCCATTAAAA-TAGAAAAGCAGTGTAA--ATTTTTAGTTTTTTGGAATGTAATGGGTTTGGAGGTTAATTTTTAAAAATAAGGCCTCATCAAACCAACTCAAATGTGAGTTCAGCTGAGTG----TTTTTTTTCCCCACAGTGGGGAGGCCCTGCCAGCTTCATGCAGGCCACAAATAATAAATTACTGTTCCCggccgggcgcggtggctcacgcctgtaatccca s panTro4.chr17 76241459 267 + 82630442 taaaatgccatc---ttTTTAATGCTTTAAATATTTTCTTTTATTGTGAGCCCATTAAAAATAGAAAAGCAGTGTAA--ATTTTTAGTTTTTTGGAATGTAATGGGTTTGGAGGTTAATTTTTAAAAATAAGGCCTCATCAAACCAACTCAAATGTGAGTTCAGCTGAGTG----TTTTTTTTCCCCACAGTGGGGAGGCCCTGCCAGCTTCATGCAGGCCACAAATAAT-AATTACTGTTCCTggccgggcgcggtggctcacgcctgtaatccca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339419 268 + 73212453 TAAAATGCCATC---TTTTTAATGCTTTAAATGTTTTCTTTTATTGTGAGCCCATTAAAAATAGAAAAGCAGTGTAA--ATTTTTAGTTTTTTGGAATGTAATGGGTTTGGAGGTTAATTTTTAAAAATAAGGCCTCATCAAACAAACCCAAATGTGAGTTCAGCTGAGTG----TTTTTTTTTCCCACAGTGGGGAGGCCCTGCCAGCTTCATGCAGGCCACAAATAATAAATTACTGTTCCCggccgggtgcggtggctcacacctgtaatccca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3666362 267 - 94967081 TAAAATACCATC---TTTTTAATGCTTTAAATATTTTCTTTTATTGTGAGCCCATTAAAAATAGAAAAGTAGTGTAA--ATTTTTAGTTTTTTGGAACGTAATGGGTTTGGAGGTTAATTTTTAAAAATAAGGCCTCATCAAACCAACCCAAATGTGAGTTCAGCTGAGTG-----TTTTTTTCCCCACAGTGGGGAGGCCCTGCCAGCTTCATGCAGGCCACAAATAATAAATTACTGTTCCTggccgggcacggtggctcacgcctgtaacccca i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74838183 266 + 80904711 TAAAATGCCACC---TTTTTAATGCTTTAAATATTTTCTTTCATTGTGAGTCCATTAAAAATAGAAAAGCAGTATAA--ATTTTTAGTTCTTTGGAATGCAGTAGGTTTGGAGGTTAAGTTTTAAAAATAAGGCCTCATCAAACC-ACCCAAATGTGAGTTCAGCTGAGTG-----TTCTTTTCAGCACAGTGGGGAGGCCCTGCCAGCTTCATGAAGGCCACAAAAAATAAATTACTGTTCCCAgctgggcgcagcggctcacgcctgtaatcgca i rheMac3.chr16 I 309 C 0 s macFas5.chr16 74647724 266 + 80997621 TAAAATGCCACC---TTTTTAATGCTTTAAATATTTTCTTTTATTGTGAGTCCATCAAAAATAGAAAAGCAGTATAA--ATTTTTAGTTCTTTGGAATGCAGTAGGTTTGGAGGTTAAGTTTTAAAAATAAGGCCTCATCAAACC-ACCCAAATGTGAGTTCAGCTGAGTG-----TTCTTTTCAGCACAGTGGGGAGGCCCTGCCAGCTTCATGAAGGCCACAAAAAATAAATTACTGTTCCCggctgggcgcagtggctcacgcctgtaatcgca i macFas5.chr16 I 178 C 0 s papAnu2.chr16 68653823 266 + 74645514 aaaaatgCCACC---TTtttaatgctttaaatattttcttttattgtgagTCCATTAACAATAGAAAAGCAGTAtaa--atttttagttctttggaATGCAGTGGGTTTGGaggttaagttttaaaaataaggccTCGTCAAACC-ACCCAAATGTGAGTTCAACTGAGTG-----TTCTTTTCAGCACAGTGGGGAGGCCCTGCCAGCTTCATGCaggccacaaaaaataaattactgttcccggctgggcgcagtggctcacgcctgtaatagca i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 30704856 266 - 75148670 TAAAATGCCACC---TTTTTAATGCTTTAAATATTTTATTTTATTGTGAGTCCATTAAAAATAGAAAAGCAGTATAA--ATTTTTAGTTCTTTGGAATGCAGTAGGTTTGGAGGTTAAGTTTTAAAAATAAGGCCTCATCAAACC-ACCCAAATGTGAGTTCAGCTGAGTG-----TTCTTTTCAGCACAGTGGGGAGGCCCTGCCAGCTTCATGAAGGCCACAAAAAATAAATTACTGTTCCCggctgggcgcagtggctcacgcctgtaatcgca i chlSab2.chr16 I 1 C 0 s calJac3.chr5 126525867 265 + 159171411 TAAAATGCCATC---TTTTTAATGCTTTAAATATTTTCTTTTATTGTGAGTCCATTAAAAATAG-AAAGTAGTGTAATTTTTTTTAGCTCTTTGGAATGTAATGGGTTTGGAGGTTAATTTTTAAAAATAAGGCCTCATGAAACTGACCCAAATGTGAGTTTAGCTGAATG----TTTTTTTCCCCCACAGTG----GGCCCTGCCAGCTGCATGCAGGCCACAAATAATAAATTACTGGTCCCGGATgggcagggtggctcacacctgtaatccca i calJac3.chr5 C 0 C 0 s canFam3.chr9 57421209 243 - 61074082 TAAAGTGCCATCTATTTTTTTAAGCTTGAAATATTTCCTTTTATTATAAATCCATTAAAAATAGAAAACCAGTATAA--ATTTTCAGTTTCCTGGAATGTAATAGGTTTGAAGGTTAACTTTTAAAAATGAAACCTCATCAAGCTGACCCAAATGTGAGCTCAGCTACACTTTTTTTTTTCTCCTCCATAGTGGCAAGCCTCTGCCAGCTGCATGCAGGCAATGGGTAATAAATTA--------------------------------GCAATCCCA i canFam3.chr9 C 0 C 0 a score=30915.000000 s hg38.chr17_GL383566v1_alt 53087 11 + 90219 gcactttggga s panTro4.chr17 76241726 11 + 82630442 gcactttggga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339687 11 + 73212453 gcactttcgga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3666629 11 - 94967081 gacctttggga i nomLeu3.chr14 C 0 M 1996 s rheMac3.chr16 74838449 11 + 80904711 gcactttggga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74647990 11 + 80997621 gcactttggga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654089 11 + 74645514 gcactttggga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705122 11 - 75148670 gcactttggga i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126526132 11 + 159171411 gcgctttgaga i calJac3.chr5 C 0 C 0 e canFam3.chr9 57421452 0 - 61074082 C a score=57823.000000 s hg38.chr17_GL383566v1_alt 53098 25 + 90219 ggccgaggcggatggatcacctgag s panTro4.chr17 76241737 24 + 82630442 gg-caaggcagatggatcacctgag i panTro4.chr17 C 0 I 651 s ponAbe2.chr17 67339698 25 + 73212453 ggccgaggtggatggatcacctgag i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74838460 25 + 80904711 ggccaaggcggatggatcacctgag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648001 25 + 80997621 ggccaaggcggatggatcacctgag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654100 25 + 74645514 ggccgaggcggatggatcacctgag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705133 25 - 75148670 ggccgaggcggatggatcacctgag i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126526143 25 + 159171411 ggccgaggcgggtggattgcctgag i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3666640 1996 - 94967081 M e canFam3.chr9 57421452 0 - 61074082 C a score=21369.000000 s hg38.chr17_GL383566v1_alt 53123 11 + 90219 gtcaggagttc s ponAbe2.chr17 67339723 11 + 73212453 gtcaggagttc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74838485 11 + 80904711 gtcaggagttc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648026 11 + 80997621 gtcaggagttc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654125 11 + 74645514 gtcaggagttc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705158 11 - 75148670 gtcaggagttc i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126526168 11 + 159171411 gtcaggagttt i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3666640 1996 - 94967081 M e canFam3.chr9 57421452 0 - 61074082 C e panTro4.chr17 76241761 651 + 82630442 I a score=465487.000000 s hg38.chr17_GL383566v1_alt 53134 229 + 90219 gagagcagcctgtccaatatggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcgtggtggtgtgcacctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcggaagttgcagtgagccaagattgcgccactgcactccagcctgggtgacagggcaacactct------gtctaaaaaa-------aaaaa--------caaaa-aa---CTGTTCCTA s panTro4.chr17 76242412 230 + 82630442 gagaccagcctgtccaatatggggaaaccccgtctttactaaaaatacaaaaaattagccaggcatggtggtgtgcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacctaggaggcggaagttgcagtgagccaagattgcgccactgcactccagcctgggtgacagggcaacactct------gtctaaaaaa-------aaaaa-------acaaaa-aa---CTGTTCCTA i panTro4.chr17 I 651 C 0 s ponAbe2.chr17 67339734 229 + 73212453 gagaccagcctgtccaatatggtgaaaccccatctctactaaaaatac-aaaaattaggcaggtgcaatggcgtgcgcctgtagtcccggctactcgggaggctgaggcagg---attgcttgaacccgggaggtggaggttgcagtgagccaagattacgccactgcactccagactgggcgacagggcaaca--ct------gtctaaaaaa-------aaaaaaaaa--aaagaaa-aa---TTGTTCCCA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74838496 238 + 80904711 gagaccagcctgtccaatatggtgaaaccccgtctctactaaaaatac-aaaaattaggcaggagcaatggtgtgggcctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgtagtgagtcaagattgcaccgctgcactccagcctgggtgacagggcaaagctct------aaaaaaaaaa-------aaagaaaaaacaacaaaa--aaCGCTGTTCCCA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648037 237 + 80997621 gagaccagcctgtccaatatggtgaaaccccgtctctactaaaaatac-aaaaattaggcaggcgcaatggtgtgggcctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgtagtgagtcaagattgcaccactgcactccagcctgggtgacagggcaaagctct--------aaaaaaaa-------aaagaaaaaacaacaaaa-caaCGCTGTTCCCA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654136 246 + 74645514 gagaccagcctgtccaatatggtgaaaccccgtctctactaaaaatac-aaaaatcaggcaggCGCaatggtgtgggcctgtagtcccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggtggaggttgcagtgagtcaagattgtgccactgcactccagcctgggtgacagggcaacgctct------aaaaaaaaaaaaacaacaaaaaaaaaccaacaaaa-aaacgcTGTTCCCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705169 251 - 75148670 gagaccagcctgtccaatatggtgaaactccgtctctactaaaaatac-aaaaattaggcagacgcaatggtgtgggcctgtagtcccagctactcaggaggctgaggcaggagaactgcttgaacccaggaggtggaggttgtagtgagtcaagactgcgccactgcactccagcctgggtgacagggcaacactctgtctccaaaaaaaaacaaaca--aaagaaaaaacaaCAAAAAAAACGCTGTTCCCA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126526179 233 + 159171411 gagaccagcctgaccaatatggggaaaccccatctctactaaaaatac-aaaaattacccaggtgtggtagtgggaacctataatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggatgcagtgagccaagatgaccccactgcactccagcctgggtgacagagcaacactcc------atctcaaaaa-------aataa------gaagaag-aaTTACTGTTCGCA i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3666640 1996 - 94967081 M e canFam3.chr9 57421452 0 - 61074082 C a score=21956.000000 s hg38.chr17_GL383566v1_alt 53363 7 + 90219 TTTAAAA s panTro4.chr17 76242642 7 + 82630442 TTTAAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339963 7 + 73212453 CTTAAAA i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74838734 7 + 80904711 TTTAAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648274 7 + 80997621 TTTAAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654382 7 + 74645514 TTTAAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705420 7 - 75148670 TTTAAAA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126526412 7 + 159171411 TTTAAAA i calJac3.chr5 C 0 I 300 s canFam3.chr9 57421452 7 - 61074082 TTTAAAA i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3666640 1996 - 94967081 M a score=777953.000000 s hg38.chr17_GL383566v1_alt 53370 313 + 90219 GTTGGAGGTAATAAAATTTCCCTGCAAGATAAATGCTATCAGTTTCTCTCTATTGGAAGCCTGCTTGCTAATTGAAGTTAATTGCTAATTTTTGATAAACTAttttgttgaattataacatcgacatagaaaaatgcacacattgtaagtgtgcaacatgatgaacgttcacatgtggacatatccatgtagcgtctgctcaaaaatctcgaacaACTCGGGCg-------tggggcg----ggggtcattaactccacttcatgggtaatgaaacaaaatatcagataagtcacgtgactttttctccccaaggttctcagct s panTro4.chr17 76242649 313 + 82630442 GTTGGAGGTAATAAAATTTCCCTGCAAGATAAATGCTATCAGTTTCTCTCTATTGGAAGCCTGCTTGCTAATTGAAGTTAATTGCTAAtttttgataaactattttgttgaattataacatcgacatagaaaaatgcacacattgtaagtgtgcaacatgatgaacattcacatgtggacacatccatgtagcgtctgctcaaaaatctcgaacaACTCGGGCg-------tggggcg----ggggtcattaactccacttcatgggtaacgaaacaaaatatcagataagtcatgtgactttttctccccaaggttctcagct i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67339970 314 + 73212453 GTTGGAGGTAATGAAATTTCCTTGCAAGATAAATGCTATCAGTTTCTCTCTATTGGAAGCCTGCTTGCTAATTGAAGTTAATTGCTAAtttttgatacactattttgctgaattataacattgacacagaaaaatgcacacattataagtgtgcaac---ctgaacattcacatgtggacacacccatgtagcctctgctcaaaAGTCTCGaacaactctggcg-------tggggtggggcggggccattaactccacttcatgggtaacgaaacaaaatatcagataagtcatgtgatttttttcccccaaggttctcagct i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74838741 318 + 80904711 GTTGGAGGTAATAAAATTTCCTTGCAAGATAAATGCTATCAGTTTCTCTCTATTGGAAGCCTGCTTGCTAATTGAAGTTAATTGCTAATttttgatacactattttgttgaattataacattgacacagaaaaatgcacacattgtaagtgtgcaacgtgatgaacattcacatgtggacacacccatgtaacagctgctcaaaAAtctc-aacaactcgggtgtgcggc-tggggcg----agggccattaacttcacttcatgggtaacgaaacaaagtatcagagaagttatgttattttttttccccaaggttcttggct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648281 319 + 80997621 GTTGGAGGTAATAAAATTTCCTTGCAAGATAAATGCTATCAGTTTCTCTCTATTGGAAGCCTGCTTGCTAATTGAAGTTAATTGCTAAtttttgatacactattttgttgaattataacattgacacagaaaaatgcacacattgtaagtgtgcaacgtgatgaacattcacatgtggacacacccatgtaacagctgctcaaaAAtctc-aacaactcgggtgtgcggcgtggggcg----agggccattaacttcacttcatgggtaatgaaacaaagtatcagagaagttatgttattttttttccccaaggttcttggct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654389 319 + 74645514 GTTGGAGGTAATAAAATTTCCTTGCAAGATAAATGCTATCAGTTTCTCTCTATTGGAAGCCTGCTTGCTAATTGAAGTTAATTGCTAATGTTTGATACACTATTTTGTTGAATTATAACATTGACACAGAAAAATGCACACATTGTAAGTGTGCAACGTGATGAACATTCACATGTGGACACACCCATGTAACAGCTGCTCAAAAATCTC-AACAACTCGGGTGTGCGGCGTGGGGCG----AGGGCCATTAACTTCACTTCATGGGTAACGAAACAAAGTATCAGAGaagttatgtgattttttttccccaaggttCTTGGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705427 316 - 75148670 GTTGGAGG---TAAAATTTCCTTGCAAGATAAATGCTATCAGTTTCTCTCTACTGGAAGCCTGCTTGCTAATTGAAGTTAATTGCTAAtttttgatacactattttggtgaattataacgttgacacagaaaaatgcacatattgtaagtgtgcaacgtgatgaacattcacatgtggacacacccatgtaacggctgctcaaaAAtctc-aacaactcgggtgtgcggcgtggggcg----agggccattaacttcacttcatgggtaacgaaacaaagtatcagagaagttatgtgatttttttcccccaaggttcttggct i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126526719 309 + 159171411 GTTGGAGGTAATCAAATTTCTTTGAAAGATAAACAGGATCAGTTTCTCCCTGTTGGAAGCCTGCTTGCTAATTGGAGTTAATTGCTAAtttttgataaactgttttgttgaattataacattgacacagaaaaatgcacacattataagtgtgcaatgtgatggacatgcatatgtggacacatccgtgtcacGTCTGCCCTA---cctcgaacaactcaggtg-------tggggta----gggatcattgactccacttcatgggtaatgaaacaaaatatcagaaaaattgtgtga-tttttttccccaaggttcgcggct i calJac3.chr5 I 300 C 0 s canFam3.chr9 57421459 295 - 61074082 ATTGGAGGGAATAATATCTCCTTGAAAGATAGATGGTGTAAGTTT----CTATTAGAAGCCTCTTTGCTCATTGAACTTAATT-----ttttttataaactattttattgaattactgtat-gacacggcaaagggcacacatcctcagtgggccacgtgacgagcttctgcacatggacgtaccagggtggcctccatccag---TCCTGagcaagcctgtgg-------ccttggg----gaggtcatgatccccattccatgggtaaggaagtgaaagagcagagaggttaagtgcttttt-----ccaaggttcccagct i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3666640 1996 - 94967081 M a score=67487.000000 s hg38.chr17_GL383566v1_alt 53683 38 + 90219 aggaagagacaTG------------CA-GCctgggcacagtggctcacgcc s panTro4.chr17 76242962 38 + 82630442 aggaagagacaTG------------CA-GCctgggcacagtggctcacgcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67340284 39 + 73212453 aggaagagacaTG------------CAggccggggcgcagtagctcgcgcc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74839059 38 + 80904711 aggaagagacaTG------------CT-ggctgggtgcaatggctcacgcc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648600 38 + 80997621 aggaagagacaTG------------CT-ggctgggtgcaatggctcacgcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654708 38 + 74645514 AGGAAGAGACATg------------ct-ggctgggtgcgatggctcacgcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705743 38 - 75148670 aggaagagacaTG------------CT-ggctgggtgcgatggctcacgcc i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57421754 50 - 61074082 aggaagagacatgacggggacgactca-gccaggcctcacggtcccacgtc i canFam3.chr9 C 0 I 71 e nomLeu3.chr14 3666640 1996 - 94967081 M e calJac3.chr5 126527028 0 + 159171411 C a score=468249.000000 s hg38.chr17_GL383566v1_alt 53721 312 + 90219 tgtaatcccagcactttaggaggctgaggcaggcggatcacctgaggttgggagttcaagaccagcctgaccaacatggagaaagcccatctctact-aaaaaaaaaaaa------tacaaaaattagccaggcgtggtggcgcaggcctgtaatcctagctacttgtgaggctgaggcaggagaatcgcttgaacgtgggaggtggaggttgcattgaaccgaaatcacgccattgcactccagcctgggcaacaagagcgaaacgcgaaactccatctc-------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa s panTro4.chr17 76243000 297 + 82630442 tgtaatcccagcactttaggaggctgaggcaggcggatcacctgaggttgggagttcaagaccagcctgaccaacatggagaaaccccatctctacc-aaaaaaaaaaaaaaaaaatacaaaaattagccaggcgtggtggcgcaggcctgtaatcctagctactcgtgaggctgaggcaggagaatcgcttgaacgcaggaggtggaggttgcattgaaccgaaatcacaccattgcactccagcctgggcaacaagagtgaaac-------tccatctc-------aaaaaaaaaaaaaaaaaaaaaaaa-------------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67340323 282 + 73212453 tgtaatcccagcactttaggaggctgaggcgggcggatcacctgaggttggaagttcaagaccagcctgaccaacatggagaaaccccatctctact-aaaaaaaaa---------tacaaaaattagccaggtgtggtggcccatgcttgtaatcccagctactcgtgaggctgaggcaggagaatcgcttgaatgcgggaggtggaggttgcattgaggcgaaatcgcgccattgcactccagcctgggcaacaagagcgaaac-------tctgtctc-------aaaaaaaaaaaaaaaaaa-------------------- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74839097 287 + 80904711 tgtaatcccagcactttaagaggctgaggtgggcggatcacctgaggttgggagttcaagaccagcctgaccgacatggagaaaccccatctctactaaaaaaaaa----------tacaaaaattagccaggcgtggtggcacatgcctgtaaacttagctgctcgtgaggcttaggcaggagaatcccttgaacgtgggaggtggaggttgcggtgagccgaaattgtgccattgcactccagcctagataacaggagcgaaac-------t--------aaaaaacaaaaaaaaaaaaaaaaaaaaaaa-------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648638 294 + 80997621 tgtaatcccagcactttaagaggccgaggtgggcggatcacctgaggttgggagttcaagaccagcctgaccgacatggagaaaccccagctctact-aaaaaaaa----------tacaaaaattagccaggcgtggtggcacatgcctgtaatcctagctgctcgtgaggcttaggcaggagaatcccttgaacctgggaggtggaggttgcggtgagccgaaattgtgccattgcactccagcctagataacaggagcgaaac-------tccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68654746 283 + 74645514 tgtaatcccagc-ctttaagaggccaaggtgggcggatcacctgaggttgggagttcaagaccagcctgaccaacatggagaaaccccatctctact-aaaaaaaa----------tacaaaaattagccaggcgtggtggcacatgcctgtaatcctagttactcgtgaggcttaggcaggagaatcccttgaacgtgggaggtggaggttgcggtgagccgaaattgtgccattgcactccagcctagacaacaggagcgaaac-------tccgtctc----------aaaaaaaaaaaaaaaaaaaaa-------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30705781 283 - 75148670 tgtaatcccagcactttaagaggccgaggtgggcggatcacctgaagttgggagttcaagaccagcctgaccaacatggagaaaccccatctctact-aaaaaaaa----------tacaaaaattagccagacatggtggcacatgcctgtaatcctagttactcgtgaggcttaggcaggagaatcccttgaacgtgggaggtggaggttgcggtgagccgaaattgtgccattgcactccagcctagacaacaggagcgaaac-------tccgtctc-----------aaaaaaaaaaaaaaaaaaag-------------- i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3666640 1996 - 94967081 M e canFam3.chr9 57421804 71 - 61074082 I e calJac3.chr5 126527028 0 + 159171411 C a score=2312079.000000 s hg38.chr17_GL383566v1_alt 54033 1051 + 90219 aGGAAGAGACATGCAGGGAGGGTCACAGGCCAGATCTGCAGC--------CCCACATTCAAGAAGTGGCTCTGAGCCCCTGCTGCAGCCAGGGGAGGGGCTGAGAAGGTGGGAAGTGCCAGCTGAGGGCAACTGAGCACAAAACACTGAAGTCAGTCAGATGGGCCCAGGAGGGATGAGGGGGCAGGGCTTGTGGGG---GATGCCAGGGCTGGAGAGTGCCTGTGGCTGGTCTGACCCTGACCCTGGGGTTGGAACAGTCATCTTAGCTCCCCAGGCTTTGGAATTGGGATTTTGAGATCCTGTATCTCTTTTTTTTTTTCAAAACTAGAGGGCTTTGATGGGGTCATTCAGTTTTTATGTGACCAAAAAGACATGTATTTCTAAAGACACACACTACTTGCTACTGCCA-TGT----TTTATTTCCTTATTTACAAAAATTTTCggccgggcgcagtggctcatctctgtaatcccagcactttgggaggccgaggcaggtggatcgcctgaggtcaggagtttgagaccagcctggccaacatggaaaa----------tacaaaaaa----aaaaaa----attagctggacatggtggtgcatgcctgtaatcccagctgcttgggaggctgaggcaggataatcacttgaacctgggaggcggaggttgcagtgagccgagatcgcgccattgcactccagcctgggcgacaagagtgaaactccttctc--------------aaaaaaaaaTTCAggccaggtgcggtggcttatgcctgtaatcccagtactttgggaggctgaggcaggaagattgcttgaggccaggagttggagaccagcctgggcaacataacaagacctcatctttact----aaaaaagtaaataaataaaattagtcaggtgtgttggtacacacctgtagtgccaactactcgggaggttgaggtgggaggattgcttgaacccaggaggtcacggctgtagtgag--ccacgatggcactgctgtactccagcctgggtgacagagtgagaccctgtctcaaaaaacaacaaaaaaa---TTTTCAGTGGCCAGT-------TACTAGATAGCATTG s panTro4.chr17 76243297 1037 + 82630442 -ggaagaGACATGCAGGGAGGGTCACAGGCCAGATCTGCAGC--------CCCACATTCAAGAAGTGGCTCCGAGCCCCTGCTGCAGCCAGGGGAGGGGCTGAGAAGGTGGGAAGTGCCAGCTGAGGGCAACTGAGCACAAAACACTGAAGTCAGTCAGATGGGCCCAGGAGGGATGAGGGGGCAGGGCTTGGGGGG---GATGCCAGGGCTGGAGAGTGCCTGTGGCTGGTCTGGCCCTGACCCTGGGGTTGGAACAGTCATCTTAGCTCCCCAGGCTTTGGAATTGGGATTTTGAGATCCAGTATCTTTTTTT----------ACTAGAGGGCTTTGGTGGGGTCATTCAGTTTTTATGTGACCAAAAAGACATGTATTTCTAAAGACACACACTACTTGCTACTGCCA-TGT----TTTATTTCCTTATTTACAAAAATTTTCggccgggcgcagtggctcatccctgtaatcccagcactttgggaggccgaggcaggtggatcgcctgaggtcaggagtttgagaccagcctggccaacatggaaaa----------tataaaaaa----aaaaaa-----ttagctggacatggtggtgcatgcctgtaatcccagctgcttgggaggctgaggcaggataatcacttgaacctgggaggcggaggttgcagtgagccgagatcgcgccattgcactccagcctgggcgacaagagtgaaactccttctc--------------aaaaaacaaTTCAggccaggtgcggtggcttatgcctgtaatcccagtactttgggaggctgaggcaggaagattgcttgaggccaggagttggagaccagcctaggcaacataacaagacctcatctttact----aaaaaa-taaataaataaaattagtcaggtgtgttggtacactcctgtagtgccaactactcgggaggttgaggtgggag-attgcttgaacccaggaggtcacggctgtagtgagagccacgatggcactgctgtactccagcctgggcgacag--tgagaccctgtctcaaaaaacaacaaaaaaa---TTTTCAGTGGCCAGT-------TACTAGATAGCATTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67340605 1064 + 73212453 -ggaagagaCATGCAGGGAGGGTCACAGGCCAGATCTGCAGCCCCACATTCCCACATTCAAGAAGTGGCTCTGAGTCCCTGCTGCAGCCAGGGGAGGGGCTGAGAAGGTGGGAAGTGCCAGCTCTGGGCAACTGAGCACAAAACACTGAAGTCAGTCAGATGGGCCCAGGAGGGATGAGGGGGCGGGGCTTGGGGGGGGCGGTGGCAGGGCTGGAGAGTGTGTATGGCTGGTCTGGCCCTGACCCTGGTGTTGGAACAGTCATCTTAGCTCCCCAGGCTTTGGAATTGGGATTTTGAGATCCAGTATCTTTTTTT-TTTCCCAAAACTGGAGGCCTTTAGTGGGGTCATTAAGTTTTTATGTGACCAAAAAGACATGTATTTCTAAAGACACACACTACTTGCTATTGCCA-TGT----TTTATTTCCTTATTTATAAAAATTTTCagccgggcgcagtggctcatccctgtaatctgagcactttgggaggccgaggcaggtggattgcctgaggtcaggaatttgagaccagcctggccaacatggaaaa----------tacaaaaaa----aaaaaaaaaaattagctggacatggtggcacatgcctgtaatcccagctgctcaggaggctgagggaggataatcacttgaacctgggaggcggaggttgcagtgaaccgagatcacgccattgcattccagcctgggcaacaagagtgaaactccttctc-------------aaaaaaaaaaTTCAggccaggtgcggtggctcatgcctgtaatcccagtactttgggaggctgaggcaggaagattgcttgaggccaggagttggagaccagcctgggcaacataacaagacctcatctttact----aaagaa-taaataaatacaattagtcaggtgtgttggtgcacacctgtagtgccagctactcgggaggttgaggtggcaggattgcttgaacccaggaggtcatggctgtagtgag--ccacggtggcactgctgtactccagcctgggcgacagagtgagaccgtgtctcaaaaaacaacaaaaaaa---TTTTCAGTGGCCAGT-------TACTAGATAGCATTG i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74839384 1083 + 80904711 -aGAAGAGACATGCAGGGAGGGTCACAGGCCAGATCTGCAGC--------TCCACATTCAAGAAGTGGCTCTGAGGCCCTACCGCAGCCAGGGGAGGGGCTAAGAAGATGGGAAGTGCCAGCTCGGGGCAGCTGAGCACAAAACACTGAGATCAGTCAGATGGGCCCAGGAGGGATGA-GGGGCGGGGCTCAGGGGGA--GATGGCAGGGCTGGAGAGTGCCTGTGGCTGTTCTGGCCCTGACCCTGGGGTTGGAACAGTCATCTTAGCTCCCCAGGCTTTGGAATTGGGATTTTGAGATCCAGTATCTTTTTTT-TTT--CAAAACTGGAGGCCTTCAGTGGGGTCACTCTGTTTTTATGTTACCAAAAAGACATATATTTCTAAAGACACAAACTACTTGCTATTGCCA-TGTTTTATTTATTTCCTTATTTATAAAAATTTTCAGGCTggtgcagtggctcattcttgtaatcccagcactttgggaggccgaggcaggtggattgcctgaggtcaggagtttgagaccagcttggccaacatggagaaa-cccgtctctactaaaaatacaaaaaaa-----ttagccgggcgtggtggtgcatgcctgtaatcccagctgcttgggaggctgaggcaggagaatcacttgaacctgtgaggcggaggttgcagtgagcggagatcacgccattgcactccagcctgggcaacaagagcgaaattccttctcaaaaaaaaaaaaaaaaaaaaaaaTTCAggccaggtgtggtggctcatgcctataatcccagtactttgggagactgaggcaggaagattgcttgaggcccggatttggagacctgcctgggcaacatagcaagacctcgtctttacttataattaaa-taaataaataaaactagtcaggtatggtggtgcacagctgtagtgccagctactcgggaggctgaggtaggaggattgcttgaacccaggaggtcatggttgcagtgag--ccatgattgcactgctgtactccagcctgggcgacagagtgagaccctgtctcaaaaaacaacaacaaaaaaTTTTTCAGTGGCCAGT-------TACTAGATAGCATGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74648932 1083 + 80997621 -aGAAGAGACATGCAGGGAGGGTCACAGGCCAGATCTGCAGC--------TCCACATTCAAGAAGTGGCTCTGAGGCCCTACCGCAGCCAGGGGAGGGGCTAAGAAGATGGGAAGTGCCAGCTCGGGGCAGCTGAGCACAAAACACTGAGATCAGTCAGATGGGCCCAGGAGGGATGA-GGGGCGGGGCTCAGGGGGA--GATGGCAGGGCTGGAGAGTGCCTGTGGCTGTTCTGGCCCTGACCCTGGGGTTGGAACAGTCATCTTAGCTCCCCAGGCTTTGGAATTGGGATTTTGAGATCCAGTATCTTTTTTT-TTT-CCAAAACTGGAGGCCTTCAGTGGGGTCACTCAGTTTTTATGTTACCAAAAAGACATATATTTCTAAAGACACAAACTACTTGCTATTGCCA-TGTTTTATTTATTTCCTTATTTATAAAAATTTTCAGGCTggtgcagtggctcattcttgtaatcccagcactttgggaggccgaggcaggtggattgcctgaggtcaggagtttgagaccagcttggccaacatggagaaa-cccgtctctactaaaaatacaaaaaaa-----ttagccgggcgtggtggtgcatgcctgtaatcccagctgcttgggaggctgaggcaggagaatcacttgaacctgtgaggcggaggttgcagtgagcggagatcacgccattgcactccagcctgggcaacaagagcgaaattccttctc-aaaaaaaaaaaaaaaaaaaaaaTTCAggccaggtgtggtggctcatgcctataatcccagtactttgggagactgaggcaggaagattgcttgaggccaggatttggagacctgcctgggcaacatagcaagacctcgtctttacttataattaaa-taaataaataaaactagtcaggtatggtggtgcacagctgtagtgccagctactcgggaggctgaggtaggaggattgcttgaacccaggaggtcatggttgcagtgag--ccatgattgcactgctgtactccagcctgggcgacagagtgagaccctgtctcaaaaaacaacaacaaaaaaTTTTTCAGTGGCCAGT-------TACTAGATAGCATGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68655029 1075 + 74645514 -agaagagacatgcAGGGAGGGTCCCAGGCCAGATCTGCAGC--------TCCACATTCAAGAAGTGGCCCTGAGGCCCTACTGCAGCCAGGGGAGGGGCTGAGAAGATGGGAAGTGCCAGCTCAGGGCAGCTGAGCACAAAACACTGAGGTCAGTCAGATGGGCCCAGGAGGGATGA-GGGGCGGGGCTCAGGGGGA--GATGGCAGGGCTGGAGAGTGCCTGTGGCTGTTCTGGCCCTGACCCTGGGGTTGGAACAGTCATCTTAGCTCCCCAGGCTTTGGAATTGGGATTTTGAGatccagtatcttttttt-tt---caaaactggaGGCCTTCAGTGGGGTCACTCAGTTTTTATGTTaccaaaaagatatatatttctaAAGACACACACTACTTGCTAttgcca-tgttttatttatttccttatttataaaaattttcaggctggtgcagtggctcatgcttgtaatcccagcactttgggaggccgaggcaggtggattgcctgaggtcaggagtttgagaccagcctggccaacatggagaaa-ccggtctctactaaaaatacaaaaaaa-----ttagccgggcgtggtggtacatgcctgtaatcccagctgctcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcacgccattgcactccagcctgggcaacaagagcgaaattccttctc-------aaaaaaaaaaaaaaaattcaggccaggtgtggtggctcatgcctataatcccagtactttgggagactgaggcagaaagattgcttgaggccaggatttggagacctgcctgggcaacataacaagacctcgtCTTTacttataattaat-taaataaataaaactagtcaggtatggtggtgcacagctgtagtgctagctactcggaaggctgaggtgggaggatcacttgaacccaggaggtcatggctgcagtgag--ccatgattgcactgctgtactccagcctgggcgacagagtgagaccctgtctcaaaaaacaacaacaaaaaatttttcaGTGGCCAGT-------TACTAGatagcattg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30706064 1072 - 75148670 -aaaagagaCATGCAGGGAGGGTCACAGGCCAGATCTCCAGC--------TCCACATTCCAGAAGTGGCTCTGAGGCCCTACTGCAGCCAGGGGAGGGGCTGAGAAGATGGGAAGTGCCAGCTCGGGGCAGCTGAGCACAAAACATTGAGGTCAGTCAGAT-GGCCCAGGAGGGATGA-GGGGTGGGGCTCAGGGGGA--GATGGCAGGGCTGGAGAGTGCATGTGGCTGTTCTGGCCCTGACCCTGGGGTTGGAACAGTCATCTTAGCTCCCCAGACTTTGGAATTGGGATTTTGAGATCCAGTATCTTTTTTT-TA---AAAAACTGGAGGCCTTCAGTGGGGTCACTCAGTTTTTATGTTACCAAAAAGACGTATATTTCTAAAGACACACACTACTTGCTATTGCCA-TGTTTTATTTATTTCCTTATTTATAAAAATTTTCAGGCTggtgcagtggctcatgcttgtaatcccagcactttgggaggccgaggcaggtggattgcctgaggtcaggagtttgagaccagcctggccaacatggagaaa-cccgtctctactaaaaatac-caaaaa-----ttagccgggcgtggtggtgcatgcctgtaatcccagctgctcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcacaccattgcactccagcctgggcaacaagagcgaaattccttctc--------aaaaaaaaaaaaaaaTGCAggccaggtgtggtggctcatgcctataatcccagtactttgggagactgaggcaggaagattgcttgaggccaggatttggagacctgcctgggcaacataacaagacctcgtctttacttataattaaa-taaataaataaaactagtcaggtatggtggtgcacagctgtagtgccagctactcagaaggctgaggtgggaggatcgcttgaacccaggaggtcatggctgcagcgag--ccatgattgcactgctgtactccagcctgggcgacagagtgagaccctgtctcaaaaaacaacaacaaaaaaTTTTTCAGTGGCCAGT-------TACTAGATAGCATTG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126527028 1075 + 159171411 aggaggggacgtgcagggagggtcacaggccaggtctgcAGC--------CCCACATTCAGGAAGTAGCTCGAAGCCCCTGCTGCAGCTGAGGGAGGGGCTGGGAAGGTGGGAAGTGCCAGCTCTGGGAAACTGAGCCCAAATCCCAGAGGTCAGTCAGATGGGGCCAGGAGGGATGAGGGGGTGGGGCTCAGAGGGA--GATGGCGGGGCTGGAGAGTGACTGGGGCTGGTCTGTCCCTGA-CCTGAGGTTGGAACAGTCATTTTAGCTCCCCAGGCTTTGGGATTGGGATTTTTAGATCTGCTATCTTTTTTT-TTTTGCAAAACTGGAGGCCTCCAGTGGGGTCACTAAGTTTTTATGTTGCCAAAAAGACACATATTTTTAAAGACACAAAATACTCGCTATTGCCATTGTTTTATTTATTTCCTTATTTATGAAAAATTTTggccgggcacagtggc-cacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgagatcaggtgttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaacacaaaacaa-----ttagctgggcgtggtggtatgtacctgtaattccagctactcgggaggctgaggcaaaagaatcgcttgaacccaggaggtggatgttgcagtgagctgagattgtgccactgcacttcagcctgggcgac-agagtaaaattccatctc----aaaaaaaaaaaaacaaaaaTTCAAGTCTggtgcagtggctcatgcctgtaatcccagtcctttgagatactgaagcaggaagattgcttgag--------ctggagatcagtctgggcaacataatgagacttcatctttaca----attaaa-taaataaagtaagtaagtaaggtgtggtggtacacccctgtagtgccagctacttgggaggctgaggtgggaggatcacttgaacccaggaggtcgaggctgcagtgag--tcgtgatagcactgctgtactccagcctgggcgacagagtgagaccctgtctcaaaaaaaaaaaaaaGTA--TTTTTCAGAGTCCAGTTACTAGATACTAGATAGCAttg i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3666640 1996 - 94967081 M e canFam3.chr9 57421804 71 - 61074082 I a score=29408.000000 s hg38.chr17_GL383566v1_alt 55084 10 + 90219 TTTTATTTTT s panTro4.chr17 76244334 10 + 82630442 TTTTATTTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67341669 10 + 73212453 TTTTATTTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3668636 10 - 94967081 TTTTATTTTT i nomLeu3.chr14 M 1996 C 0 s rheMac3.chr16 74840467 10 + 80904711 TTTTATTTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74650015 10 + 80997621 TTTTATTTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68656104 10 + 74645514 ttttattttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30707136 10 - 75148670 TTTTATTTTT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126528103 10 + 159171411 ttttttgttt i calJac3.chr5 C 0 I 323 e canFam3.chr9 57421804 71 - 61074082 I a score=93874.000000 s hg38.chr17_GL383566v1_alt 55094 52 + 90219 TGAGGACActc-tctctctctct------ctctctctctctctcacacacacacacaca s panTro4.chr17 76244344 48 + 82630442 TGAGGACActc-tctctctctct------ctctctctcac----acacacacacacaca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67341679 52 + 73212453 TGAGGACACTT-TCTCTGTCTCT------CTCTCTGTCTCTTTcacacacacacacaca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3668646 53 - 94967081 TGAGGACActcttctctctctct------ctctctctctctcacacacacacacacaca i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74840477 42 + 80904711 TGAGGAGACCC-TCTCTCTCTCT----------------cacacacacacacacacaca i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74650025 34 + 80997621 TGAGGACACTT-TCTCTCTCTCT------------------------CTcacacacaca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68656114 56 + 74645514 tgaggacactt-tctctctctctctc--tctctctctctcacacacacacacacacaca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30707146 58 - 75148670 TGAGGACActt-tctctctctctctctgtctctctgtctcacacacacacacacacaca i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126528436 42 + 159171411 TGTGGACACTT-TCTTTCTCTTT------CCCTCTCTCTC----------ATACACACa i calJac3.chr5 I 323 C 0 e canFam3.chr9 57421804 71 - 61074082 I a score=451707.000000 s hg38.chr17_GL383566v1_alt 55146 142 + 90219 cacacacaAagg------aaagaaaaa--aa------agaatgaagaccagtcctttgaacaccttcagcttt-------------------------acaaaac---------aacctctttgcgttgtcttcttttatctccttttgccttggacaggtgagaacttgtcacaggctggcctcggccc s panTro4.chr17 76244392 148 + 82630442 cacacacaAAGG------aaaaaaaaa--aacaaaacagaatgaagaccagtcctttgaacaccttcagcttt-------------------------acaaaac---------aacctctttgcgttgtcttcttttatctccttttgccttggacaggtgagaacttgtcacaggctggcctcggccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67341731 142 + 73212453 cacacacGAAGA------AAAAAAAAA--Ac------agaatgaagaccagtcctttgaacaccttcagcttc-------------------------acaaaac---------aacctctttgcattgtcttcttttatttccttttgccttggacaggtgagaacttgtcacaggctggcctcggccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3668699 148 - 94967081 cacacacacacGAATCATAAAAAAAAA--Ac------agaatgaagaccagtcctttgaacaccttcagcttt-------------------------acaaaac---------aacctctttgcattgtcttcttttatctccttttgacttggacaggtgagaacttgccacaggctggcctcggccc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74840519 142 + 80904711 cacacacGAagg------aaaaaaacc--cc------agagtgaagaccagtcctttgaacaccttcagcttt-------------------------acaaaac---------cacctctttggattgtcctcttttatctccttttgccttggacaggtgagaacttgtcacaggctggcctcggccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74650059 142 + 80997621 cacacacGAagg------aaaaaaacc--cc------agagtgaagaccagtcctttgaacaccttcagcttt-------------------------acaaaac---------cacctctttggattgtcctcttttatctccttttgccttggacaggtgagaacttgtcacaggctggcctcggccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68656170 142 + 74645514 cacacacaaagg------aaaaaaaac--cc------aaagtgaAGACCAGTCCTTTGAACACCTTCAGCTTT-------------------------ACAAAAC---------CACCTCTTTGCATTGTCCTCTTTTATCTCCTTTTGCCTTGGACAGGTGAGAACTTGTTATAGGCTGGCCTCGGCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30707204 142 - 75148670 catacacGAagg------aaaaaaaac--cc------agagtgaagaccagtcctttgaacaccttcagcttt-------------------------acaaaac---------cacctctttgcattgtcctcttttatctccttttgccttggacaggtgagaacttgtcacaggctggcctcggccc i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126528478 140 + 159171411 cacacaagaaga------agaaaaaaa--ac------agaacgaagaccagaccttcgaacaccttcagcttt-------------------------acaaaac---------cgcctctttgcattgtc--cttttatcgcattttgccttggacaggttagaacttgtcaccggctggcctcggtcc i calJac3.chr5 C 0 C 0 s canFam3.chr9 57421875 175 - 61074082 CATTTACACAGG------AAAGGAAAATTTC------AGAAGAAAGACCAGT-CTTTGAACATCTTAGGCTCTTATAAAAGAAGAAAAGCAAACACAAACAAAACCAagaaactcacctcttggcattgttctcttttgtctcattttgcttctaactggt--ggacttgtcatgggccagccccaggcc i canFam3.chr9 I 71 C 0 a score=248904.000000 s hg38.chr17_GL383566v1_alt 55288 289 + 90219 tcagcctggtgtctgggagccCTGAATGGCTGGGAGCGGGGGAGGGGTCAGCAGTGATCTCTTTTAGGGCTAATTGTGTAggtcggggtggcgggaggtatgggggtggtggtggTGAAGCCTCTgggtttccagacttaggaagtaaaactacaggctacgcagttacacctgaatttcagataaacaatcatttcttttagtgtaaa--tatgtcccaaatatt------------ttatactaacagaaattatttgccgcttatctgaaattcaagtgtaactgggcggcctgtatttt s panTro4.chr17 76244540 289 + 82630442 tcagcctggtgtctgggagccCTGAATGGCTGGGAGCGGGGGAGGGATCAGCAGTGATCTCTTTTAGGGCTAATTGTGTAGGTCGGGGTGGCAGGAGGTATGGGGGTGGTGGTGGTGAAGCCTCTgggtttccagacttaggaagtaaaactacaggctacgcagttacacctgaatttcagataaacaatcatttcttttagtgtaaa--tatgtcccaaatatt------------ttatactaacagaaattatttgccgcttatctgaaattcaagtgtaactgggcggcctgtatttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67341873 270 + 73212453 tcagccttctgtctgggagcc-----------------GGGGAGGGATCAGCAGTGATCTCTTTTAGGGCTAATTGTGTAGGTCGGGGTGGCGGGAGATACGGGAGTGGTGGTGGTGAAGCCACTgggtttccagacttaggaagtaaaactacaggctacacagttacacctgaatttcagataaacaatcatttcttttactgtaaa--tatgtcccaaatatt------------ttatactaac--aaattatttgctgcttatctgaagttcaagtctaactgggcggcctgtatttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3668847 288 - 94967081 tcagccttctgtctgggagccCTGAATGGCTGGGAGCGGGGCAGGGATCAGCAGTGATCTCTTTTAGGGCTAATTGTGTAGGTCGGGG-GGTGGGAGGTATGGGGGTGGTGGTGGTGAAGCTTCTgggtttccagacttaggaagtaaaactacaagctacgcagttacacctgaatttcagataaaccatcatttcttttagtgtaaa--tatgtcccaaatatt------------ttctactaacagaaattatttgctgcttgtctgaagttcaagtgtaactgggcggcctgtatttt i nomLeu3.chr14 C 0 C 0 s calJac3.chr5 126528618 249 + 159171411 tcagcctggtgtctgggaaccCTGAATGGCTGGGAGCAGGAGAGA----------GATCCCTCTTAGGGGTA-----------------------------TGGGGTGGTGGTGGTGAAGCCATTgggtttccagacttaggaagtaaaactgcaggccccccaattacacctgaatttcagataaacaataatttctttcagtgtaaa--tatgtcccaaatact------------ttatactaacagaaattatttcctgcttatctgaagttcgaatgtaact-ggtggcctgtatttt i calJac3.chr5 C 0 I 284 s canFam3.chr9 57422050 262 - 61074082 ccagcctggtgtctgggaaccCCAACTGG---------GGGACGGTCACAGC-----TCCTCTCCAGGACTACCAGCCTGGGTCCGGG-GAC-----------------------CGAGGCCa--gagtttccagatttagcaagtaaaaatacagaatgcccagttacatgctaatttcagataaacaataattttttaaagtatatgtttatgtcttaaatactatgtgggacatctcatact-gcaaaaattatttgctgcttacctgaagttcaagtctaactgggcattctgtgtttg i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74840661 0 + 80904711 C e chlSab2.chr16 30707346 0 - 75148670 C e papAnu2.chr16 68656312 0 + 74645514 C e macFas5.chr16 74650201 0 + 80997621 C a score=8586.000000 s hg38.chr17_GL383566v1_alt 55577 15 + 90219 atcaggcagtcctCG s panTro4.chr17 76244829 15 + 82630442 atcaggcaatcctCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67342143 15 + 73212453 atcaggcaatcctCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3669135 15 - 94967081 atcaggcaatcctTG i nomLeu3.chr14 C 0 C 0 s canFam3.chr9 57422312 14 - 61074082 gtcctgcaa-cTTCG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74840661 0 + 80904711 C e calJac3.chr5 126528867 284 + 159171411 I e chlSab2.chr16 30707346 0 - 75148670 C e papAnu2.chr16 68656312 0 + 74645514 C e macFas5.chr16 74650201 0 + 80997621 C a score=70178.000000 s hg38.chr17_GL383566v1_alt 55592 96 + 90219 CCAAAAGACACTTTCAAGGAGATTTGGGACTGAGCAGAGTGTGCTAAGGAGACCTGAGATGATGCCTGTGGGCGCCGAGTGGCCGAGTGACTCTCG s panTro4.chr17 76244844 96 + 82630442 CCAAAAGACACTTTCAAGGAGATTTGGGACTGAGCAGAGTGTGCTAAGGAGACCTGAGATGATGCCTGTGGGCACCGAGTGGCCGAGTGACTCTCG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67342158 96 + 73212453 CCAAAAGACACTTTCGAGGAGCTTTGGGACTGAGCAGAGTGTGCTAAGGAGACCTGAGATGATGCCCGTGGGCGCCGTGTGGCCGAGTGACTCTCG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3669150 94 - 94967081 CCAAAAGACACTTTCAAGGAGCTTTGGGACTGAGC--AGTGTGCTAAGGAGACCTGAGATGATGCCCACGGGCGCCGAGTGGCCGAGTGACTCTCG i nomLeu3.chr14 C 0 C 0 s calJac3.chr5 126529151 93 + 159171411 CCAAAAGACACTTTCAAGGAGCTTTGGGATGGAGCGGAGTGTGCTAAGGACACCTGAGATGGGGCCCATGGG-GGCAAGGGGCCGAGTGACTCG-- i calJac3.chr5 I 284 C 0 s canFam3.chr9 57422326 43 - 61074082 CCGA----------------------GGGCTGAGCGGAGTGTGCCCAGAGAGC--GAGAGGGTGCCT----------------------------- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74840661 0 + 80904711 C e chlSab2.chr16 30707346 0 - 75148670 C e papAnu2.chr16 68656312 0 + 74645514 C e macFas5.chr16 74650201 0 + 80997621 C a score=2907932.000000 s hg38.chr17_GL383566v1_alt 55688 951 + 90219 TCTCCTGACTCT-GCTCCCTGCGACCCGAGCCACCTGCAGCTGCAGCCCCTGTGGGCCTGGAGCCCGTTTCGCAACACCCCCACCAGCGCCGCTTGGCAGGG---GTATTTATTTATGTTTTTAATGAAAGCAAA--TTAAGATTCACTTACTCTTGAGAGCTGTGCTACGATTGCCCTTGTGATAAGTGGAGACACCTGGCTTTTCTCTACCTGGCCGGTTGCCTACGAGAGAGGCCTGCGTGGGGTTCAGTTTCC--CAGGCT-GGTCCCGCA-GTGGCTTTTCAATCCGTCATCAAATCTTCATCAGGCGTCTCTGCACACAGCACTGAGGGAAGCACTGGCGTCCAGGCTATAGTCAGGCTCCCTGCCCTCCATCACTCACCATCTACCTGGGGGTGCAGTAGCGCCCCAGG-----AAGAGTGAAACAATAGGTatattatccccaaccccacccatggcacgggcattgctgtcccccacagagcagataagaaaactggggctcagatgttgaaggaccgtgttgaagag-cacagagctggtttgtagcagaagtggaatttccaccttgatctctgggttcccTCTACCAGACCCATGGTTCTCAGcccagggagcactgaaaaaagctccaggcccagatattctgatttaattgttctgggg------------tgGgtactttttaaagttcc--tgaagattccagtgtgcagAGA-GACCTGGGCCTCCCCCCACCATTGAGACAAGTGCCTGCTCCGGCTGTTCAGAGGAGGCAGCCCCACAGCAGGAGAAGCCCCTCT----------CCACTGAGGACAGATCAGAGTCCGCAGAA-----AGAACATGCCGGGGACTGGATGGCTTGAGCAGCGCTGAGTGGGAATGCACGAGGGACACTAGGGCAGTGACTGGCCCCTCCTGCAGGTCCGGAGGGCTCATGAGGCGAGTAAGAGGGAAAGCTGAGATTAA-GTGAGATT s panTro4.chr17 76244940 954 + 82630442 TCTCCTGACTCT-GCTCCCTGCGACCCGAGCCACCTGCAGCTGCAGCCCCTGTGGGCCCGGAGCCCGTTTCGCAACACCCCCACCAGCGCCGCTTGGCAGGCCCTGTATTTATTTATGTTTTTAATGAAAGCAAA--TTAAGATTCACTTACTCTTGAGAGCTGTGCTACGATTGCCCTTGTGATAAGTGGAGACACCTGGCTTTTCTCTACCTGGCCGGTTGCCTACGAGAGAGGCCTGCGTGGGGTTCAGTTTCC--CAGGCT-GGTCCTGCA-GTGGCTTTTCAATCCGTCATCAAATCTTCATCAGGCGTCTCTGCACACAGCACTGAGGGAAGCACTGGCTTCCAGGCTATAGTCAGGCTCCCTGCCCTCCGTCACTCACCATCTACCTGGGGGTGCAGTAGCGCCCCAGG-----AAGAGTGAAACAATAGGTatattatccccaaccccacccatggcacgggcattgctgtcccccacagagcagataagaaaactggggctcagacattgaaggaccgtgttgaagag-cacagagctggtttgtagcagaagtggaatttccgccttaatctctgggttcccTCTACCAGACCCATGGTTCTAAGcccagggagcactgaaaaaagctccaggcccagatattctgatttaattgttctgggg------------tgggtactttttaaagttcc--tgaagattccagtgtgcagAGA-GACCTGGGCCTCCCCCCAACATTGAGACAAGTGCATGGTCCGGCTGTTCAGAGGAGGCAGCCCCACGGCAGGAGAAGCCCCTCC----------CCACTGAGGACAGATCAGAGTCCGCAGAA-----AGAACATGCCGGGGACTGGATGGCCTGAGCAGCGCGGAGTGGGAACGCACGAGGGACGCTAGGGCAGTGACTGGCCCCTCCTGCAGGTCCGGAGGGCTCATGAGGCGAGTAAGAGGGAAAGCTGAGATTAA-GTGAGATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67342254 959 + 73212453 TCTCCTGACTCT-GCTCCCTGTGACCCGAGCCACCTGCAGCTGCAGCCCCTGTGGGCCCAGAGCCCGTTTCGCAACACCTCCACCAGTGCCGCTTGGCAGGCCCTGTATTTATTTATGTTTTTAATGAAAGCAAA--TTAAGATTCACTTACTCTTGAGAGCTGTGCTACGATTGCTCTTGTGATAAGTGGAGACACCTGGCTTTTCTCTAACTGGCCGGTTGCCTATGAGAGAGGCCTGCGTGGAGTTCAGTTTCC--CAGGCT-GGTCCCGCG-GTGGCTTTTCAATCCGTCACCAAATCTTCATCAGGCGTCTCTGCACACAGCACTGAGGGAAGCACTGGCGTCCAGGCTATAGTCAGGCTCCCTGCCCTCCGTcactcaccatctacctgggggtgcagtcgcgccccaggaagacaagagtgaaacaataggtatattatccccaaccccacccatggcatgggcattgctgtcccccacagagcagataagaaaactggggctcagacgttgaaggaccgtgttgaagag-cacagagctggtttgtagcagaagtggaatttccaccttgatctctgggttcccTCTACCAGACCCACGGTTCTCAGCCCAGGGAGCACTG-AAAAAGCTCCAGGcccagagattctgatttaattgttctgggg------------tgggtactttttaaagttcc--tgaagatttcaatgtgcagAGA-GACCTGGGCCTCCCTCCATAATTGAGACAAGTGCATGGTCTGGCTGTCCAGAGGAGGCAGCCCCACGGCAGGAGAAGCCCCTCC----------CCACTGAGGACAGATCAGAGTCCGTGGAA-----AGAACATGCCAGGGACTGGATGGCCTGAGCAGCGCGGAGTGGGAACGCACGAGGGATGCTAGGGCAGTGACTGGCCCCTCCTGCAGGTCTGGAGGGCTCATGAGGTGAGTAAGAGGGAAAGCTGAGATTAAGGTGAGATT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3669244 965 - 94967081 TCTCCTGACTCT-GCTCCCTGTGACCCGAGCCACCTGCAGCTGCAGCCCCTGTGGGCCCAGAGCCCGTTTCGCAACACCCCCACCAGTGCTGCTTGGCAGGCCTTGTATTTATTTATGTTTTTAATGAAAGCAAA--TTAAGATTCACTTACTCTTGAGAGCTGTGCTATGATTGCTCTTGTGATAAGTGGAGACACCTGGCTTTTCTCTACCTGGCCAGTTGCCTATGAGAGAGGCCTGCGTGGGGTTCAGTTTCC--CAGGCT-GGTCCCGCG-GTGGCTTTTCAATCCGTCATCAAATCTTCATCAAGCGTCTCTGCACACAGCACTGAGGGAAGCACTGGTGTCCAGGCTATAGTCAGGCTCCCTGCCCTCCGTCACTCACCATCTACCTGGGGGTGCAGTAGCGCCCCAGGAAGACAAGAGTGAAACAATAGGTATATTATCCCCAACCCCATCCATGGCACGggcattgctgtcccccacagagcagataagaaaactggggctcagacgttgaaggaccatgttgaagag-cacagagctggtttgtagcagaagtggaatttccaccttgatctctgggttcccTCTACCAGACCCACGGTTCTCAGcccagggagcactgaaaaaagctccaggcccagagattctgattttattgttctgggg------------tgGCtactttttaaagttcc--tgaagattccaacgtgcagAGA-TACCTGGGCCTCCCCCCACAATTGAGACAAGTCCATGGTCTGGCTGTTCAGAGGAGGCAGCCCCACGACAGGAGAAGCTCCTCC----------CCACTGAGGACAGACCAGAGTCCGTGGAAAGAACAGAACATGCTGGGGACTGGAAGGCCTGAGCAGCGCAGAGTGGGAATGCACAAGGGACGCTAGGGCAGTGACTGGCCCCTCCTGCAGGTCCGGAGAGCTCATGAGGTGAGTAAGAGGGAAAGCTGAGATTAAGGTGAGATT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74840661 955 + 80904711 TCTCCTGACTCT-GCTCCTTGTGACCTGAGCCACCTGCAGCTGCAGCCCCCGTGGGCCCAGAGCCCGTTTCGCAACACCCCCACCAGCGCTGCTTGGCAGGCCCTGTATTTATTTATGTTTTTAATGAAAGCAAA--TTAAGATTCATTTACTCTTGAGAGCTGTGCTGCGATTGCTCTTGTGGTAAGTGGAGACACCTGGGTTTTCTCTACCTGGTTGGTCGCCGGTGAGAGAGGCCTGCGTGGGGCTCAGTTTCC--CAGGTT-GGTCCTTCA-GTGGCTTTTCAATCCGTCATCAAATCTTCATCAGGCGTCTCTGCACACAGCGCTGAGGGAAGCACTGGCGTCCGGGCTGTACTCAGGCTCCCTGCCCTC---CACTCGCCATCTACCTGGGGGTGCAGTAGCGCCCCAGGAAGACAAGACTGAAGCAATAGGTatattatccccaaccccacccatggcatgggcattgctgacccccacacagcagataagaaaact-gggctcagacattgaaggaccgtgtc-aagag-cacagagctggtttgtgccggaattggagtttccactttgatctctgggttccGTTTACCAGACCCACGGTTCTCAGCCCAGATAGCGCTGAAAAAAGCTCCAGGcccagagattctgatttaattgttctgggg------------tgggtattttttaaagttcc--tgaagataacaatgtgcagAGA-GACCCGGGACTCCCCGCACAGCTGAGACGAGTGCATGGTCCGGCTGTCCAGAGAAAGCAGCTCCAAGGCAGGAGATGCCCCTCC----------CCGCTGAGGACAGATCAGAGTCCGTGGAA-----AGAACATGCCAGGGACTGGATGGCCTGAGCAGCGTGGAGTGGGAACACACAAGGGATGCTAGGGCAGTGACTGGCCCCTCCTGCAGGTCCAGAGGGCTCATGAGGTGAGTAAGAGGGAAAGCTGAGATTCAGGTGAGATT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74650201 955 + 80997621 TCTCCTGACTCT-GCTCCTTGTGACCTGAGCCACCTGCAGCTGCAGCCCCCGTGGGCCCAGAGCCCGTTTCGCAACACCCCCACCAGCGCTGCTTGGCAGGCCCTGTATTTATTTATGTTTTTAATGAAAGCAAA--TTAAGATTCATTTACTCTTGAGAGCTGTGCTGCGATTGCTCTTGTGGTAAGTGGAGACACCTGGGTTTTCTCTACCTGGTTGGTCGCCGGTGAGAGAGGCCTGCGTGGGGCTCAGTTTCC--CAGGTT-GGTCCTTCA-GTGGCTTTTCAATCCGTCATCAAATCTTCATCAGGCGTCTCTGCACACAGCGCTGAGGGAAGCACTGGCGTCCGGGCTGTAGTCAGGCTCCCTGCCCTC---CACTCGCCATCTACCTGGGGGTGCAGTAGCGCCCCAGGAAGACAAGACTGAAGCAATAGGTatattatccccaaccccacccatggcacgggcattgctgacccccacacagcagataagaaaact-gggctcagacattgaaggaccgtgtc-aagag-cacagagctggtttgtaccggaattggagtttccactttgatctctgggttccGTTTACCAGACCCACGGTTCTCAGCCCAGATAGCGCTGAAAAAAGCTCCAGGcccagagattctgatttaattgttctgggg------------tgggtattttttaaagttcc--tgaagataacaatgtgcagAGA-GACCCGGGACTCCCCGCACAGCTGAGACGAGTGCATGGTCCGGCTGTCCAGAGAAAGCAGCTCCAAGGCAGGAGATGCCCCTCC----------CCGCTGAGGACAGATCAGAGTCCGTGGAA-----AGAACATGCCAGGGACTGGATGGCCTGAGCAGCGTGGAGTGGGAACACACAAGGGATGCTAGGGCAGTGACTGGCCCCTCCTGCAGGTCCAGAGGGCTCATGAGGTGAGTAAGAGGGAAAGCTGAGATTCAGGTGAGATT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68656312 958 + 74645514 TCTCTTGACTCT-GCTCCTTGTGACCTGAGCCACCTGCAGCTGCAGCCCCTGTGGGCCCAGAGCCCGTTTTGCAACACCCCCACCAGCGCTGCTTGGCAGGccctgtatttatttatgtttttaatgaaagCAAA--TTAAGATTCATTTACTCTTGAGAGCTGTGCTGCGATTGCTCTTGTGATAAGTGGAGACACCTGGGTTTTCTCTACCTGGCCGGTCGCCGGTGAGAGAGGCCTGCGTGGGGCTCAGTTTCC--CAGGTT-GGTCCTGCA-GTGGCTTTTCAATCCGTCATCAAATCTTCATCAGGTGTCTCTGCACACAGCGCTGAGGGAAGCACTGGTGTCCGGGCTGTAGTCAGGCTCCCTGCCCTCCATCACTCGCCATCTACCTGGGGGTGCAGTAGCGCCCCAGGAAGACAAGACTGAAGCAATAGGTATATTATCCCCAACCCCACCCATGGCACGGGCTTTGCTGTCCCCCACACAGCAGATAAGAAAACT-GGGCTCAGACGTTGAAGGACCGTGTC-AAGAG-CACAGAGCTGGTTTGTAGTGGAATTGGAGTTTCCACCTTGATATCTGGGTTCCCTTTACCAGACCCACGGTTCTCAGCCCGGACAGCGCTGAAAAAAGCTCCAggcccagagattctgatttaattgttcTGGGG------------tgggtatttttttaagttcc--tgaAGATAACAATGTGCAGAGA-GACCCGGGACTCCTCACACAGCTGAGATGAGTGCATGGTCCGGCTGTTCAGAGAAATCAGCTCCAAGGCAGGAGATGCCCCTCC----------CCGCTGAGGACAGATCAGAGTCCGTGGAA-----AGAACATGCCGGGGACTGGAGGGCCTGAGCGGCGTGGAGTGGGAACACACAAGGGATGCTAGGGCAGTGACTGGCCCCTCCTGCAGGTCCGGAGGGCTCATGAGGTGAGTAAGAGGGAAAACTGAGATTAAGGTGagatt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30707346 958 - 75148670 TCTCTTGACTCT-GCTCCTTGTGACCTGAGCCACCTGCAGCTGCAGCCCCTGTGCGCCCAGAGCCCGTTTTGCAACACCCCCACCAGCGCTGCTTGGCAGGCCCTGTATTTATTTATGTTTTTAATGAAAGCAAA--TTAAGATTCATTTACTCTTGAGAGCTGTGCTGCGATTGCTCTTGTGATAAGTGGAGACACCTGGGTTTTCTCTACCTGGCCAGTTGCCTGTGAGAGAGGCCTGTGTGGGGCTCAGTTTCC--CAGGTT-GGTCCTGCA-GTAGCTTTTCAATCCGTCATCAAATCTTCATCAGGTGTCTCTGCACACAGCGCTGAGGGAAGCACTGGCGTCCGGGCTGTAGTCAGGCTCCCTGCCCTCCATCACTTGCCATCTACCTGGGGGTGCAGTAGCGCCCCAGGAAGACAAGACTGAAGCAATAGGTatattatccccagtcccacccatggcatgggcattgctgacccccacacagcagataagaaaact-gggctcagacgttgaaggaccgtgtc-aagag-cccagacctggtttgtagcggaattggagtttccaccttgatatctgggttcccTTTACCAGACCCACGGTTCTCAGCCCGGACAGCACTGAAAAAAGCTCCAGGcccagagattctgatttaattgttctgggg------------tgggtattttttaaagttcc--tgaagataacaacgtgcagAGA-GACCCAGGACTCCTCACACAGCTGAGACGAGTGCATGGTCCGGCTGTTCAGAGAAATCAGCTCCAAGGCAGGAGATACCCCTCC----------CCGCTGAGGACAGATCAGAGTCCGTGGAG-----AGAACATGCAGGGGACTGGATGGCCTGAGCGGCGTGGAGTGCGAACACACAAGGGATGCTAGGGCAGTGACTGGCCCCTCCTGCAGGTCCGGAGGGCTCATGAGGTGAGTAAGAGGGAAAGGTGAGATTAAGGTGCGATT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126529244 968 + 159171411 GCTCCTGACTCTGGCCCCCTGTGACCCGAGCCACCTGCAGCTGCAGTCCCCGTGGGCTGAGAGCCCGTTTCACAACACTCCCATCAGCGCTGCTTGGCAGGCCTTATATTTACTTATGTTTTAAATGAAAACCAA--CCAAGATTCACTTACTCTTGAGAGCTGTGCTGCGACTGTTCTTGTGAGAAGTGGAGACACCTGGCTTTTCTCAGCCTGGCCAGTCTCCTGT--GAGAGGCCTGCGTGGGGCTTGGTTTCC--CAGGCCGGGTCTCACG-GTGGGTTTTCAATCCTTTGTCAAATCTTCATCAGGCGTCTCTGCACACAGAGCCGAGGGAAGCACTGGAGTCCGGG-TGTGGCCAGGCTCCCTGCCCTTCATCACTCACCATCTACCTGGGGGTGCAGTAGTGCCCCAGGGAGACAAGAGTGCAACAATAGGCACATTATCCCCAACCCCACCcatggcac-ggcattgctgtcccccacagagcagacagggaaacggaggctcagacattgaaggacggtgttgaagag-cacagagctggtttgtagcagaattgggatttccacctagatctctgggttcccTCTATCAGACCCACAGTTCTCAGCCCAGAGAGCACTGGAAAAATCTccaggcccagagattctgattcagttgttctgggg------------tgggtatttgtttaagttcc--tgaagactccaatgtgcagAGA-GAGCGGTGCCTCCCCCAACAACTGAGTCAATCACATGGTCTGGCTGTTCAGAGGAGGCAACCTCATGGCAGGAGAAGCCCCGCCCACCACCCCGCCACTGAGGACAGATCAGAGTCCGTGGAA-----AGAACCTGCTGGGTACCGGACGGCCTGAGCACCACGGAGTGGGAACGCACCAGGGATGCTTGGACAGTGACTGGTCCCTCCTGCAGGTCTTGGGGGTTCGTGAAGTGAGTAAGAGGGAAAGCCGAGATTAAGATGAGATT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57422369 726 - 61074082 ----------CC-CCACCCTGTGACCCACGGCACCTGCAGCCCCAGCCCC--------------------------------------------TGGCAGGCCCCGTATTTATTTATGCTTTTAATGAAAGCAAATTTTAAGATTCACTTTCTCTGGAGAACTGTAACATGATGGCCCTTAGGGGAAGTGGAGACACCTGGTTTTTCTCAGCCTGGC---------------GCGTCCGGCGTGGGGCTCCGGTTCCAGCCGGCC-GACCCCACAGGCCGCCTTGCACTCCGGTGGCGGAAGTGTACGGAGCGCCTCTGCACCGGGCACTGTGG--------------CGGG--GTGGGGGGGCCACCTCCACTC--TCACTCACCCTCCGCCTGGTGATGTGGGAGCACT--------------------------GCATACAGTCCCCCAACCGCACAACAGCCCAGG-------------------Gcagctgaggaaactgaggcacagatattt-aggatcatgcagaagctccattgggctgatacctaacggctctggggtgttaacccagacctccggtctccctccaCCAGACCAATGGTTC-AGGCCCAGGGAGTGCTCTGGAAACCTCCACAGCCAGACCTCCTGATGGAATGTGACTGGGGGGGGGGGGCTGTTGGGGAGCTCTGAAAGCTCCTTTGGAGGTGCCAGTGGACAGAGACGAATCTGGCTTCTCCCCACAAAGAAAG--------------------TCAGAGGAAG-----------------------CTCC-------------------------------CCGTGGGA-----AGAGAA----------------GCCCCaggaggagggggtgggggaggaggagg------aggagggaga--------------------ggaggg-----gggaggaggaggaggGAGA----------AAGTGGGAGT i canFam3.chr9 C 0 I 219 a score=805503.000000 s hg38.chr17_GL383566v1_alt 56639 286 + 90219 CTAggctgggcgtggtggctcacacctgtaatcccagaactttgggaggccgaggtgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatggtggaaccccatctctacaaaaaatacaaaaattagccgggcgtggcggcgcacgcctgtagtcccagctactcaggcggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggcaacaagagcaaaactccatc------tc s panTro4.chr17 76245894 290 + 82630442 CTAggctgggcgtggtggctcacacctgtaatcccagaactttgggaggccgaggtgggtagatcacctgaggtcaggagttcgagaccagcctggccaacatggtggaaccccatctctacaaaaaatacaaaaattagccgggcgtggtggcgcgcacctgtagtcccagctactcaggcggctgaggcaggagaattgcttgaacccgggaggcagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaacaagagcaaaactccagg--aaaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67343213 292 + 73212453 CTAggccgggcgtggtggctcacacctgtaatcccagcacttcgggaggccgaggcgggtggatcacctgaggtcaggagtttgagaccaacctggccaacatggtgaaaccccatctctactaaatatacaaaaattagccgggtgtggtggcgcatgcctgtggtcccagctactcaggcggctgaggcaggagaattgcttgaatccgggaggcagaggttgcagtgagctgagatcgtgccactgcactcccgtctgggcaacaaaagcaaaactccatctcagaaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3670209 284 - 94967081 CTAggccgggcatggtggctaacatctgtaatcctagcactttgggaggccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaaaaaggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtgtgtgcctgtagtcccagctactcaggcagctgaggcaggagagctgcttgaacctggaaggcagaggttgcagtgagctgagatcgtgccattgcactccagcctgagcaacaagagcaaaactccatc-------- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74841616 274 + 80904711 CTAggccaggcatggtggctcacacctgtaattccagcactt-gggaggccgaggttggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaacccatttc---------tacaaaaattagccaggcatggtggcgtgcgcctgtagtcccagctactcaggcggctgaggcaggagaattgcttgaacccggaaggcagaggttgcagtgagctgagatcgtgccactgcactctagcctgggcaacaagagcaaaactccatc-------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74651156 274 + 80997621 CTAggccaggcatggtggctcacacctgtaattccagcactt-gggaggccgaggttggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaacccatttc---------tacaaaaattagccaggcatggtggcgtgcgcctgtagtcccagctactcaggcggctgaggcaggagaattgcttgaacccggaaggcagaggttgcagtgagctgagatcgtgccactgcactctagcctgggcaacaagagcaaaactccatc-------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68657270 274 + 74645514 ctaggccaggcatggtggctcacacctgtaattccggcactt-gggaggctgaggttggtgggtcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttc---------tacaaaaattagccgggcatggtggcgtgcacctgtagtcccagctactcaggtggctgaggcaggagaattgcttgaacccagaaggcagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaacaagagcaaaactccatc-------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30708304 274 - 75148670 CTAggccaggcatggtggctcacacctgtaattccagcactt-gggaggccgaggttggtgggtcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttc---------tacaaaaattagctgggcatggtggcgtgcacctgtagtcccagctactcaggcggctgaggcaggagaattgcttgaacccggaaggcagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaacaagagcaaaactccatc-------- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126530212 282 + 159171411 CTAggccaagcatggtggctcacgcctgtaatcccagcactttgggaggctgtggctggcagatcacctgaggtcaggagttcaagaccagcctggccaacatggtaaaaccccgtctctacaaaaa-tacaaaaattagcccggcatgatggcgggtacctgtaatcccagctactcaggaggccgaggcaggagaatcgcttgaacccgtgaggcagaggttgcagtgagctgagattgtgccactgcactccagcctgggcgac-ggagggagactacatc-------- i calJac3.chr5 C 0 C 0 e canFam3.chr9 57423095 219 - 61074082 I a score=65316.000000 s hg38.chr17_GL383566v1_alt 56925 37 + 90219 agaaaaaaaaaaaa--aaaaGGATGAGATTCTagatgga----- s panTro4.chr17 76246184 37 + 82630442 aaaaaaaaaaaaaa--aaaaGGATGAGATTCTAGATGGA----- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67343505 37 + 73212453 aaaaaaaaaaaaaa--aaaaGGATGAGATTCTAGATGGA----- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3670493 37 - 94967081 tcagaaaaaaaaaa--aaaaGGATGAGATTCCAGATGGG----- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74841890 34 + 80904711 tcaggaaaaaaa-----aTAGGATGAGATTCTAGATGGA----- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74651430 34 + 80997621 tcaggaaaaaaa-----aTAGGATGAGATTCTAGATGGA----- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68657544 32 + 74645514 tcaggaaaaaaa-------aggatgagattcTAGATGGA----- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30708578 35 - 75148670 tcaggaaaaaaa----aaTAGGATGCGATTCTAGATGGA----- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126530494 34 + 159171411 tcaaaaaacaaa-----aaaagaTGAGATTCTGGGTGGA----- i calJac3.chr5 C 0 C 0 s canFam3.chr9 57423314 42 - 61074082 --aggaggaagggaggaggagggggggagCTCCCATGGTTCCCA i canFam3.chr9 I 219 C 0 a score=9842.000000 s hg38.chr17_GL383566v1_alt 56962 4 + 90219 agct s panTro4.chr17 76246221 4 + 82630442 AGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67343542 4 + 73212453 AGCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3670530 4 - 94967081 AGCT i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74651464 4 + 80997621 AGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68657576 4 + 74645514 AGCT i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126530528 4 + 159171411 AGCT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57423356 4 - 61074082 GGCT i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74841924 0 + 80904711 C e chlSab2.chr16 30708613 0 - 75148670 C a score=34847.000000 s hg38.chr17_GL383566v1_alt 56966 102 + 90219 aaaggatgagattctagatggaagctggaggatgagattctagatggaagctaaaggatgagatt--ctagatgggagctagag---------------ggaagctaaaggatgagatt s panTro4.chr17 76246225 91 + 82630442 AGAGGATGAGATTCTAGATGGGAGCTAGAGGATGAGATTCTAGATGGGAGCTAGAGGATGAGATT--CTAGATGGGAGCTAG--------------------------AGGATGAGATT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67343546 91 + 73212453 AGAGGATGAGATTCTAGATGGAAGCTAGAGGATGAGATTCTAGATGGGAGCTAGAGGATGAGATT--CTAGATGGGAGCTAG--------------------------AGGATGAGATT i ponAbe2.chr17 C 0 I 297 s nomLeu3.chr14 3670534 117 - 94967081 AAAGGATGAGATGCTGGATGGGAGCTAAAGGATGAGATGCTGGATGGGAGAGAGAGGATGTGATG--CTGGATGGGAGATAGAGGATGAGATGCTGGATGAGAGACAGAGGATGAGATG i nomLeu3.chr14 C 0 C 0 s canFam3.chr9 57423360 74 - 61074082 ------GGAGGGTCT-GCTGGGAGC-ACAGGGTGG---CCTGAGCAGAGGCGGGGAGGTGGGATGGACTCCCGGGGAGTCAG--------------------------AGG-------- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74841924 0 + 80904711 C e calJac3.chr5 126530532 0 + 159171411 C e chlSab2.chr16 30708613 0 - 75148670 C e papAnu2.chr16 68657580 0 + 74645514 C e macFas5.chr16 74651468 0 + 80997621 C a score=6121.000000 s hg38.chr17_GL383566v1_alt 57068 16 + 90219 -ctagatgggagctaga s panTro4.chr17 76246316 16 + 82630442 -CTAGATGGGAGCTAGA i panTro4.chr17 C 0 I 405 s ponAbe2.chr17 67343934 16 + 73212453 -ctagatgggagctaga i ponAbe2.chr17 I 297 C 0 s nomLeu3.chr14 3670651 16 - 94967081 -CTGGATGGGAGCTAAC i nomLeu3.chr14 C 0 I 15 s canFam3.chr9 57423434 13 - 61074082 GCTGAGCTGTAGT---- i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74841924 0 + 80904711 C e calJac3.chr5 126530532 0 + 159171411 C e chlSab2.chr16 30708613 0 - 75148670 C e papAnu2.chr16 68657580 0 + 74645514 C e macFas5.chr16 74651468 0 + 80997621 C a score=3054.000000 s hg38.chr17_GL383566v1_alt 57084 4 + 90219 tggg s panTro4.chr17 76246737 4 + 82630442 TGGG i panTro4.chr17 I 405 C 0 s ponAbe2.chr17 67343950 4 + 73212453 tggg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3670682 4 - 94967081 TGGG i nomLeu3.chr14 I 15 C 0 s canFam3.chr9 57423447 4 - 61074082 AGGG i canFam3.chr9 C 0 C 0 e rheMac3.chr16 74841924 0 + 80904711 C e calJac3.chr5 126530532 0 + 159171411 C e chlSab2.chr16 30708613 0 - 75148670 C e papAnu2.chr16 68657580 0 + 74645514 C e macFas5.chr16 74651468 0 + 80997621 C a score=3984.000000 s hg38.chr17_GL383566v1_alt 57088 4 + 90219 agct- s panTro4.chr17 76246741 4 + 82630442 AGCT- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67343954 4 + 73212453 agct- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3670686 4 - 94967081 AGCT- i nomLeu3.chr14 C 0 I 2385 s rheMac3.chr16 74841924 4 + 80904711 AGCT- i rheMac3.chr16 C 0 C 0 s chlSab2.chr16 30708613 4 - 75148670 AGCT- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57423451 4 - 61074082 -GCCT i canFam3.chr9 C 0 C 0 e calJac3.chr5 126530532 0 + 159171411 C e papAnu2.chr16 68657580 0 + 74645514 C e macFas5.chr16 74651468 0 + 80997621 C a score=2095896.000000 s hg38.chr17_GL383566v1_alt 57092 683 + 90219 TGCCTCAGGCTTTTCTGTTGATGTTTCTCAGGGATCCT-CTCTTCCCCTGGAGCAAAAGGCACAGATGAAGTGTCAGGGAGGACGCCAGTCCCATATCTTCTTCTCACCCTGGAGTGGCAGTTTCCTCACAGAAAGCCCATCCTGGCTCCTCCCCCTGCAAGGAGGGATGTGGAGGGACAGAGGAGCAGCAGGCAAGGCCAGC-AGGAGGTGACATAGGCAGGGAGGACCAGGCCAAGGTTGGGAGGAGTCTACATTTGGCGCTGGGGTTGGACACCTGGCTGACCTCTAGTGTGTGGCCTTGCGGTGGCTGATGGATGCCCCTCCACCCCC-ATCCCAC-AGTGCCTATgttccccaaagggtgtcccgtggaactggcaaggtgccttgtgatgaaaaggttctggggtcaatacatttgggaaatgctgcatgctgtagccctta-tggacacccacagcccccacgagcctcctacaggctctgagaagtccagcaatgaagagaagcctgtgaaggtttgtttcacgttcaactgttgccactttgtgacctcagagccctcttttctgtgtgacattgacacctatgcacatGACGGAGGGCACCCTGCAG-CAGGCAGGCGCAACGCAAGGGGCGCGGCTGCACCAGGCTCCCC-CCGTGGAGTGATTCGCTAAAGAAGGTGG s panTro4.chr17 76246745 684 + 82630442 TGCCTCAGGCTTTTCTGTTGATGTTTCTCAGGGATCCT-CTCTTCCCCCGGAGCAAAAGGCACAGATGAAGTGTCAGGGAGCACGCCAGTCCCATGCCTTCCTCTCACCCTGGAGTGGCAGTTTCCTCACAGAAAGCCCATCCTGGCTCCTCCCCCTGCAAGGAGGGATGTGGAGGGACAGAGGAGCAGCAGGCAAGGCCAGC-AGGAGGTGACATAGGCAGGGAGGACCAGGCCAAGGTTGGGGGGAGTCTACATTTGGCGCTGGGGTTGGACACCTGGCTGACCTCTAGTGTGTGGCCTTGCGGTGGCTGATGGATGCCCCTCCACCCCCCATCCCAC-AGTGCCTATgttccccaaagggtgtcccatggaactggcaaggtgccttgtgatgaaaaggttctggggtcaatacatttgggaaatgctgcatgccgtagccctta-tggacacccacagcccccacgagcgtcctacaggctctgagaagtccagcagtgaagagaagcctgtgaaggtttgtttcacgttcaactgttgccactttgtgacctcggagccctcttttctgtgtgacattgacacctatgcacatGACGGAGGGCACCCTGCAG-CAGGCAGGCGCAACGCAAGGGGCGCGGCTGCACCAGGCTCCCC-CTGTGGAGTGATTCGCTAAAGAAGGTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67343958 673 + 73212453 TGCCTCGGGCTTTTCTGTTGATGTTTCTCAGGGATCCC-CTCTTCGCCTGGAGCAAAAGGCACAGATGAAGTGTCAGGGAGGACGCCAGTCCCATGCCTTCCTCTCACCCTGGAGTGGCAGTTTCCTCACAGAAAGCCCATCCTGGCTCCTCCCCCTGCAAGGAGGGATGTGGAGGGACAGAGGAGCAGCAGGCAAGGCCAGC-AGGAGGTGACACAGGCAGGGAGGACCAGGCCGAGGTTGGGAGGAGTCTACATTTGGCACTGGGGTTGGACACCTGGCTGACCTCTAGTGTGTGGCCTTGCGGTGGCTGG----------TCCACCCCC-ATCCCAC-AGTGCCCATGTTCCCCAAAGCGTGTCCCATGGAACCTGCAAGGTACCTTGTGATGAAAAGgttctggggtcaacacgtttgggaaatgctgcatgccctagccctta-tggagacccacagcccccaagagactcctacaggctctgagaaatctagcaatgaagagaagcctgtgaaggtttgtttcacgttcaaccgttgccactttgtgacctcggagcCCTCTTTTCTGTATGACAATGACACCTATGCACATGATGGAGGGCACCCTGCAG-CAGGCAGGAGCAACACAAGGGGCGCGGCTGCTCCAGGCTCCCC-CCGTGGAATGATTCGCTAAAGAAGGTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3673075 682 - 94967081 TGTCTCGGGCTTTTCTGTTGATGTTTCTCATGGATCCC-GTCTTCCCCCGGAGCAAAAGGCACAGATGAAGCGTCAGTGAGGACGCCAGTCCCATGCCTTCCTCTCACCCTGGAGTGGCAGTTTCCTCACAGAAAGCCCACCCTGGCTCCTTCCCCTGCAAGGAGGGATGTGGAGGGACAGAGGAGTAGCAGGCACGGCCAGC-AGGAGGTGACACAGGCAGGGAGGACCAGGCGGAGGTTGGGAGGAGTCTACATTTGGCGCTGGGGTTGGACAGCTGGCTGACCTCTAGTGTGTGGCCTTGCAGTGGCTGATGGATGCCCCTCCACCCCC-ATCCCAC-CGTGCCCATgttccccaaagggtgtcccatggaaccggcaaggtgccttgtgatgaaaaggttctggggtcaatatgtttgggaaatgctgcatgccccagtcctta-tggagacccacagcccccatgagcctactacaggctctgagaagtccagcaatgaagagaagcctgtgaaggtttgtttcatgttcaattgttgccactttgtgacctcggggccctcttttctgtatgacaatgacacctatgcacatGACGGAGTGCA-CCTGCAG-CAGGCAGGAGCAACGCAAGGGGCGCAGCTGCTCCAGGCTCCCC-TCGTGGAATGATTTGCTAAAGAAGGTAG i nomLeu3.chr14 I 2385 C 0 s rheMac3.chr16 74841928 685 + 80904711 TGCCTCGGGCTTTTCTGTTGATGTTTCTCTGGGATCCCTTTCTTCCCCGGGAGCAAAAGGCACAGATGAAGTGTCAGGGAGGACGCCAGTCCCATGCCTTCCTCTCACCCTGGAGTGGCAGTTTCCTCACGGAAAGCCCATTCTAGCTCCTCCCCCTGCAAGGAGGGATGTGGAGGGACAGAGGAGCAGCAGGCAAGGCCAGC-AGGAGGTAACATAGGCAGGGAGGACCAAGTCAAGGTTGGGAGGAGTCTTCATTTGGCGCTGGGGTTGGACACCTGGCTGACCTCTAGTGTTTGGCCTTGCGGTGACTGATGGATGCCCCTCCACCCCC-ATCCCAC-AGTGCCCATgttccccaaagggtgtctcatggaaccagcaaggtgccttgtgatgaaaagtttctggggtcaatacattagggaaatgttgcatgacctagccctta-tggagacccacagcccccacaagcatcctctaggctctgagaagtccagcaatgaagagaagcctatgaagatttgtttcacattcaattgttgccactttgtgacctcggagccctattttCTGTATGACTATGACACCTGTGCACATGACAGAGTGCACCCTGCAG-CAGGCAGGAGTAACACAAGGGGCACAGCTGCTCCAGGCTCCCCACAGTGGAATGATTCGCTAAAGAAGGTGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74651468 685 + 80997621 TGCCTCGGGCTTTTCTGTTGATGTTTCTCTGGGATCCCTTTCTTCCCCGGGAGCAAAAGGCACAGATGAAGTGTCAGGGAGGACGCCAGTCCCATGCCTTCCTCTCACCCTGGAGTGGCAGTTTCCTCACGGAAAGCCCATTCTAGCTCCTCCCCCTGCAAGGAGGGATGTGGAGGGACAGAGGAGCAGCAGGCAAGGCCAGC-AGGAGGTAACATAGGCAGGGAGGACCAAGTCAAGGTTGGGAGGAGTCTTCATTTGGCGCTGGGGTTGGACACCTGGCTGACCTCTAGTGTTTGGCCTTGCGGTGACTGATGGATGCCCCTCCACCCCC-ATCCCAC-AGTGCCCATgttccccaaagggtgtctcatggaaccagcaaggtgccttgtgatgaaaagtttctggggtcaatacattagggaaatgttgcatgacctagccctta-tggagacccacagcccccacaagcatcctccaggctctgagaagtccagcaatgaagagaagcctatgaagatttgtttcacattcaattgttgccactttgtgacctcggagccctattttCTGTATGACTATGACACCTGTGCACATGACAGAGTGCACCCTGCAG-CAGGCAGGAGTAACACAAGGGGCACAGCTGCTCCAGGCTCCCCACAGTGGAATGATTCGCTAAAGAAGGTGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68657580 684 + 74645514 TGCCTTGGGCTTTTCTGTTGATGTTTCTCGGGGATCCCTCTCTTCCCCCGGAGCAAAGGGCACAGATGAAGTGTCAGGGAGGACGCCAGTCCCATGCCTTCCTCTCACCCTGGAGTGGCAGTTTCCTCACGGAAAGCCCATCCTAGCTCCTCCCCCTGCAAGGAGGGATGTGGAGGGACAGAGGAGCAGCAGGCAAGGCCAGC-AGGAGGTAACATAGGCAAGGAGGACCAAGCCAAGGTTGGGAGGAGTCTTCATTTGGCACTGGGGTTGGACGCCTGGCTGACCTCTAGTGTTTGGCCTTGCGGTGACTGATGGATgcccctccaccccc-atcccac-AGTGCCCATGTTCCCCAAAGGGTGTCTCATGGAACCGGCAAGGTGCCTTGTGATGAGAAGTTTCTGGGGTCAATACATTAGGGAAATGTTGCATGACCTAGCCCTTA-TGGAGACCCACAGCCCCCACAAGCATCCTCCAGGCTCTGAGAAGCCCAGCAATGAAGAGAAGCCTGTGAAGATTTGTTTCACATTCAATT-TTGCCACCTTGTGACCTCGGAGCCCTCTTTTCTGTATGACTATGACACCTATGCACATGACAGAGTGCACCCTGCAG-CAGGCAGGAGCAACACAAGGGGTGCAGCTGCTCCAGGCTCCCCACAGTGGAATGATTCGCTAACGAAGGTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30708617 685 - 75148670 TGCCTCGGGCTTTTCTGTTGATGTTTCTCTGGGATCCCTTTCTTCTCCCGGAGCAAAGGGCACAGATGAAGTGTCAGGGAGGACGCCAGTCCCATGCCTTCCTTTCACCCTGGAGTGGCAGTTTCCTCACGGAAAGCCCATCCTAGCTCCTCCCCCTGCAGGGAGGTATGTGGAGGGACAGAGGAGCAGCAGGCAAGGCCAGC-AGGAGGTAACATAGGCAGGGACGACCAAGCCAAGGTTGGGAGGAGTCTTCATTTGGCGCTGGGGTTGGACGCCTGGCTGACCTCTAGTGTTTGGCCTTGCGGTGACTGATGGATGCCCCTCCACCCCC-ATCCCAC-AGTGCCCATgttccccaaagggtgtctcatggaaccggcaaggtgccttgtgatgagaagtttctggggtcaatacattagggcaatgttgcatgacctagccctta-tggagacccagagcccccacaagcatactccaggctctgagaagcccagctatgaagagaagcctgtgaagatttgtttcacattcaattgttgccaccttgtgacctcggagccctcttttCTGTATGACTATGACACCTGTGCACATGACAGAGTGCACCCTGCAG-CAGGCAGGAGCAACACAAGGGGTGCAGCTGCTCCAGGCTCCCCACAGTGGAATGATTCACTAATGAAGGTGG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126530532 670 + 159171411 CGCCTCGGGCTTTTCTGCTGATGTTTCTCAGGAATCCG-CCTGATGCCCCTAGCAAAAGGCACGGAGGGAGTACCAGGGAGGA--CCAGTCCCTTGCCTT----TAGCCCTGGAGTGGCAGTTTCCTCACTGAAAGCCCATCCCGGCTCTGCCCCCTGCCAGGAGGAACAGGGAGAGACAGAGGAGCAGCAGGCAAGGCCTGT-AGGAGTTGACACAGGCAGGGAGGACCAGGCGAAGGTTGGGAGGAGTCTTCATTTGGCTCTGGGGTTGGATGCTTGGCTGACCTCTAATGTGTGGCCTTGCGGTGGCCGATGGATGCCGCTCTACCCCC-ATCCCAC-GGTGCCCATTttccccaaaggatgccccatggaaccaacaaggtgccttgtgat--aaggtttgtggggtcaatgcttttgggaaatgctacatg-tctagtcctta-tggagacccacagcctccacgagcacactgcaggctctgagaagccctgcagtgaagaggagcctatgaaggttagctttgggttgaattgttgccactttgtgacctcagagccctgttttctgtatgacaatgatacctatgggcatGATGGCGTGCGCCCTGGGG-CAGGCAGGAGCAACACAAGGGGCGTGGCTGCTCCAG----CAC-CCGTGGAATGATTCGCTAAAGAAGGTGG i calJac3.chr5 C 0 I 312 s canFam3.chr9 57423455 587 - 61074082 TGCCTTGGGCTTTCCGATCCGTGTGGCT-GGGGATTCC-CAGCTACCCCTGAGCGAAAAGCACGGGTGCAGCGTCAGTGAGGATGCCAGCCCCGGGTTTTCCCATCA------------------------GAAAG----------------CTCCTGC-AGGAGGGCAGCGGAGGGG-AGAGGAAGAGTGGGCAAGGCCGGCTGGGAAGAGGCAAGGGCAAAGGAGAGCCGGCCCAGGGTCCGAGGAGCCTTCATTTGCAGCTGATGTTGGA-GCCGAGCCCACTTCC------CGCCACCACGA------------------CCTCCCGC-CTCCTACAAGCGCCC---tttcccagagagtgtcccatggaacc-gcaggg--acctgtaacgaagag-ttctggtgtc-gtgggtttggggaaggctgtgtactctaactcttgttggagactcacagcatccacaagcatgttaaaggctccgagaagtcctacagcaaGATGCTGCCCAGTTAGTATGGTTTGATGT--AAGTGGGGACACTTTGTGACCTCAGAGCCC--TTCTCTGTATGATGAGGAAACCTATGATCATCTGGGAATGCGTCCCGGAGACAGGCAGTGGCCACTCCTGGG-------------------CGC-GTTGAAAACGGTTCCCTAA-GGAGGTGG i canFam3.chr9 C 0 C 0 a score=1481473.000000 s hg38.chr17_GL383566v1_alt 57775 497 + 90219 GAAGTGGGGGTG----TCTCTAGCATCTGTGGTCCCCAAGTTAA---TGAGGAGGAGCCATGCCCTGCTCAGGCTGCTGGTGAGGGAGGGAAGTGCCTTCTCTGAGGA-------TGCGCTTGTGATGAATCCAGGAAGGG---GGCGCTCTTCGGGGGAGCCCAGCAGCTGTCAGAAGCCTGGTGTGGAGGA---CCAGGAGCGCC--TGAACCTCAGGGCTTGAGGCTGCGCCCTGGCTCGCCTGGTCTGGGGGGAAGCTCAGGCCTCTGTGGGCCTCAGTTACTGACAGACCCAGAACCCTGCCT-----CGTGGGGAGG-GAATCAGTGTGTGTGAGCTGC-GTGATCTCAGACTCTGCATCATATATTCTATAGAATGCAGGCGTACATGGAAACCGCACATCAGGAGCGGATGGCGAAAGACTGCTTGAAAATTGGCTGCAGACCAAACCACCTAAATCCAGAAACAAACCGAAACTTGCTTTAGGTCCTAATAACAGTGAGTTTACTTGTAAAAGCTTT s panTro4.chr17 76247429 497 + 82630442 GCAGTGGGGGTG----TCTCTAGCATCTGTGGTCCCCAAGTTAA---TCAGGAGGAGCCATGCCCTGCTCAGGCTGCTGGTGAGGGAGGGAAGTGCCTTCTCTGAGGA-------TGCGCTTGTGATGAATCCAGGATGGG---GGCACTCTTCAGGGGAGCCCAGCAGCTGTCAGAAGCCTGGTGTGGAGGA---CCAGGAGTGCC--TGAACCTCAGGGCTTGAGGCTGTGCCCTGGCTCGCCTGGTCTGGGGGGAAGCTCAGGCCTCTGTGGGCCTCAGTTACTGACAGACCCAGAACCCTGCCT-----CGTGGGGAGG-GAATCAGTGTGTGTGAGCTGC-GTGATCTCAGACTCTGCATCATATATTCTATAGAATGCAGGCGTACATGGAAACCGCACATCAGGAGCGGATGGCGAAAGACTGCTTGAAAATTGGCTGCAGACCAAACCACCCAAATCCAGAAACAAACCGAAACTTGCTTTAGGTCCTAGTAACAGTGAGTTTACTTGTAAAAGCTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67344631 504 + 73212453 GAAGCCGGGGTG----TCTCTAGCATCTGTGGTCCCCAAGTTAA---TCAGGAAGAGCCGTGCCCTGCTCAGGCTGCTGGTGAGGGAGGGAAGCGCCTTCTCCAAGGATGCGCTTTGCGCTTGTCATGAATCCAGGATGCG---GGCGCTCTTCAGGGGAGCCCAGCAGCTGACAGAAGCCTGGTGTGGAGGA---CCAGGAGCGCC--TGAACCTCAGGGCTTGAGGCTGAGCCCTGGCTCGCCTGGTCTGGGGGGAAGCTCAGGCCTCTGTGGGCCTCAGTTACTGACAGGCCCAGAACCCTGCCT-----CGTGGGGAGG-GAATCAGTGTGTGTGAGCTGC-GTGATCTCAGACTCTGCATCATATATTCTATAGAATGCAGGAGTACGTGGAAACTGCACATCAGGAGTGGATGGCGAAAGACTGCTTGAAAATTGGCTACAGACCAAACCACTCAAATCCAGAAACAAACCGAAACTTGCTTTAGGTCCTAATAACAGTGAGTTTACTTGTAAAAGCTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3673757 488 - 94967081 GAAGTGGGGGTG----TCTCTAGCATCTGTGGTCCCCAAGTTAA---TCAGGAGGAGCTGTGCCCTGCTCAGGCTACTGGTGAGGGAGGGAAGCACCTTCTCTGAGGA-------TGCGCTTGTCATGAATCCAGGATGGG---GGTGCTCTTCAGGGGAGCCCAGCAGCTGTCAGAAGCCTGTTGTGGAGGG---CCAGGAACGCC--TGAACCTCAGGGCTTGGGGCTGTGCCCTGGCTTGCTTGGTCTGGGGGTAAGCTCAGGCCTCTGTGGGCCTCAGTTACTGACAGGCCCAGAACCCTGCCT-----CGTGGGGAGG-GAATCAGCGTGTGTGAGCTGC-GTGGTCTCAGACTCTGCATC---------ATAGAACACAGGCTCACGTGGAAACTGCACATCAGGAATGGATGGCGAAAGACTGCTTGAAAAGTGGCTGCAGACCAAACCACCTAAATCCAGAAACAAACCAAAACTTGCTTTAGGTCCTAATAACAGTGAGTTTACTTGTAAAAGCTTT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74842613 497 + 80904711 GAAGTGGGGGTG----TCTCTAGCATCTGTGGTCCCCAGGTTAA---TCCAGAGGAGCCGTGCTCTGCTCAGGCTGCTGGTGAGGGAGGGAAGCGCCTTCCCTGAGGA-------TGTGCTTGTCGTGAATCCAGGTTGGGAGGGGGGCTCTTCAGGGGAACCCAGCAGCTGTCAGAAGCCTGGTGTAGAGGA---CCAGGAGCGCC--TGACCCTCAGGGCTTGGGGCTGTGCCCTGGCTCACCTGGTCTCGGGGGAAGCTCAGGCCTCTGTGGG-CTCAGTTACTGACAGGCCCAGAACCCTGCCT-----TGTGTGGAGG-GAATCAGTGTG-GTGAGCTGC-GTGATCTCAGACTCTGCATCATATATTCTATAGAATGCAGGCTTACGTGGAAACCGCACATCAGGAACAGATGGTGAAAGACTGCTTGAAAATTGGCTGCAGAGCAAACCACCC-AATCCAGAAACCAACCGAAACTTGCTTTAGGTCCTAATAACAGTGAGTTTACTTGTAAAAGCTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74652153 497 + 80997621 GAAGTGGGGGTG----TCTCTAGCATCTGTGGTCCCCAGGTTAA---TCCAGAGGAGCCGTGCTCTGCTCAGGCTGCTGGTGAGGGAGGGAAGCGCCTTCCCTGAGGA-------TGTGCTTGTCATGAATCCAGGTTGGGAGGGGGGCTCTTCAGGGGAACCCAGCAGCTGTCAGAAGCCTGGTGTAGAGGA---CCAGGAGCGCC--TGACCCTCAGGGCTTGGGGCTGTGCCCTGGCTCACCTGGTCTCGGGGGAAGCTCAGGCCTCTGTGGG-CTCAGTTACTGACAGGCCCAGAACCCTGCCT-----TGTGTGGAGG-GAATCAGTGTG-GTGAGCTGC-GTGATCTCAGACTCTGCATCATATATTCTATAGAATGCAGGCTTACGTGGAAACCGCACATCAGGAACAGATGGTGAAAGACTGCTTGAAAATTGGCTGCAGAGCAAACCACCC-AATCCAGAAACCAACCGAAACTTGCTTTAGGTCCTAATAACAGTGAGTTTACTTGTAAAAGCTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68658264 498 + 74645514 GAAGTGGGGGTG----CCTTTAGCATCTGTGGTCCCCAGGTTAA---TCCAGAGGAGCCGTGCCCTGCTCAGGCTGCTGGTGAGGGAGGGAAGCGCCTTCCCTGAGGA-------TGTGCTTGTCATGAATCCAGGTTGGGAGAGGGGCTCTTCAGGGGAGCCCAGCAGCTGTCAGAAGCCTGGTGTGGAGGA---CCAGGAGCGCC--TGACCCTCAGGGCTTGGGGCTGTGCCCTGGCTCACCTGGTCTCGGGGGAAGCTCAGgcctctgtgggcctcagttaCTGACAGGCCCAGAACCCTGCCT-----TCTGTGGAGG-GAATCAGTGTG-GTGAGCTGC-GTGATCTCAGACTCTGCATCATATATTCTGTAGAATGCAGGCTTACGTGGAAACCGCACGTCAGGAACGGATGGTGAAAGACTGCTTGAAAAGTGGCTGCAGAGCAAACCACCC-AATccagaaacaaaccaaaacttgCTTTAGGTCCTAATAACAGTGAGTTTACTTGTAAAAGCTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30709302 500 - 75148670 GAAGTGGGGGTG----CCTCTAGCATCTGTGGTCCCCAGGTTAA---TCCGGAGGAGCCGTGCCCTGCTCAGGCTGCTGGTGAGGGAGGGAAGCTCCTTCCCTGAGGA-------TGTGCTTGTCATGAATCCAGGTTGGGAGGGGGGCTCTTCAGGGGAGCCCAGCCGCTGTCAGAAGCCTGGTGTGGAGGA---CCAGGAGCGCC--TGACCCTCAGGGTTTGGGGCTGTGCCCTGGCTCACCTGGTCTCGGGGGAAGCTCAGGCCTCTGTGGGCCTCAGTTACTGACAGGCCCAGAACCCTGCCT-----TGTGGGGAGG-GAATCAGTGTGTGTGAGCTGC-GTGATCTCAGACTCTGCATCATATATTCTGTAGAATGCAGGCTTACGTGGAAACCGCACGTCAGGAACGGATGGTGAAAGACTGCTTGAAAATTGGCTGTAGAGCAAACCACCCAAATCCAGAAACAAACTGAAACTTGCTTTAGGTCCTAATAACAGTGAGTTTACTTGTAAAAGCTTT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126531514 490 + 159171411 GAAGT-GAGGTG----TCTCTAGTATCTTCGGTTCCCAGTTTAA---TCCAGAGGAGCCATGCGCTGCTCAGCCTGCTGGTGAGGGA-AGAAATGCCTTCTCTGAGGA-------TGTACTTGTCATGAATCCAGGATGG----GGGGCTCTTCAGGGGAGCCCAGC-GCTGTCAGAAACCTGATGTGGAGAA---GCAAGAGCGCC--TGG-CCTCAGGGCCAGGGACTGCACCCTGGCTTGCCTGGTTTTGGGAGCAGCTCAGGCCCCTGTGGGCTTCCGTTACTGACAGGCCCAGAACCCTGCCT-----TGTGGAGAGG-GAGTGGGTGTGTGTGAGCTGC-GTGACCTCAGGCTCTGCGTCGTATATTCTACAGAACACAGGCTTTTGCGGAAACTGCACATCAGAAACGGATGAC-AAAGATTCCTTGAAAATTAGCTACAGACAAAAACACCCAAATCCAGAAACAAA-TGAAACTTGCTTTAGGTCCTAATAACAGTGAGTTTAATCGTAAAAGCTTG i calJac3.chr5 I 312 C 0 s canFam3.chr9 57424042 455 - 61074082 ------GGGATGTGGATCGCTTGGATCCGTGGTGTCCAGGAGAATCTTCCAGAAGGGCCACCACTTCCTCAGGCTGCTGCGGAGGGAGGGAAGCGCTGTCTGGGAGGA-------AGCACTCAGCATGAGTCCAGGACGGA---TCTCCCCCCAACGGAGGCCCCGCTACCATTTGAGGCCTGACCTGGAAGAAATCCAATAAAATCAATTAAATGCAAATTTTAAGAT------------------------GCAGATTCTCAGG-ATCTGGGGG-----------------CCCAG--CCCTGCTTGTCGGGGTGCGGAGGAGAATCCTAGCAGGTGAGCCCCTGAAACCTTGGGCCCCATGGCCCGTATTCTGGATAATG--GTCTCACGGGAAAGCCACCCACT--GAAATGATGCTTAACCACCCTTTGAAAGTCGGC---AGGCCACGCTGCCCCAAGGTGGGGGAAAA----ACCTCGCTTTAGGTCCTAATAACAAGGAGTTTGATTGTAAACGATCT i canFam3.chr9 C 0 I 416 a score=134261.000000 s hg38.chr17_GL383566v1_alt 58272 47 + 90219 CATTAATTTAAGATAAAACAAAAGACCCTTTAAAGTATAATAACACT s panTro4.chr17 76247926 47 + 82630442 CATTAATTTAAGATAAAACAAAAGACCCTTTAAAATATAATAACACT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67345135 47 + 73212453 CATTAATTTAAGATAAAACAAAAGACCCTTTAAAATATAATAACACT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3674245 47 - 94967081 CATTAATTTAAGATAAAACAAAAGACCCTTTAAAATATAATAACACT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74843110 44 + 80904711 CATTAATCTAAGATAAAACAAAAGACCCTTTAAAAT---ATAACACT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74652650 44 + 80997621 CATTAATCTAAGATAAAACAAAAGACCCTTTAAAAT---ATAACACT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68658762 44 + 74645514 CATTAATCTAAGATAAAACAAAAGACCCTTTAAAAT---ATAACact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30709802 47 - 75148670 CATTAATCTAAGATAAAACAAAAGACCCTTTAAAATATAATAACACT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126532004 47 + 159171411 CATTAATTTATGATGAAACAAAAGACTCTTTAAAATATAGTAACACT i calJac3.chr5 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I a score=253147.000000 s hg38.chr17_GL383566v1_alt 58319 102 + 90219 ggttgggcacagtggctcacgcctgtaatcgcagcactttggaaggccgaggcaggtggatcatctgaggtcaggagttcgagaccaccctgaccaacatgt s panTro4.chr17 76247973 102 + 82630442 ggttgggcacagtggctcacgcctgtaatcgcagcactttggaaggccgaggcaggtggatcatctgaggtcaggagttcgagaccaccctgaccaacatgt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67345182 102 + 73212453 ggtcaggcacagtggctcacacctgtaatcccagcactttggaaggccgaggcaggtggatcatctgagatcaggagttcaagaccagcctgaccaacatgt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3674292 102 - 94967081 ggtcgggcacagtggctcacgcctgtaatcctagcactttggaaggctgaggcaggtggatcatctgaggtcaggagtttgagaccagcctgaccaacatgt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74843154 102 + 80904711 ggtcgggcacagtggctcatgcctgtaatcccagcactttggaaggccgaggtaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatgt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74652694 102 + 80997621 ggtcgggcacagtggctcacgcctgtaatcccagcactttggaaggccgaggtaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68658806 102 + 74645514 ggtcgggcacagtggctcatgcctgtaatcccagcactttggaaggccgaggtaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatgt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30709849 102 - 75148670 ggtcgggcacagtggctcatgcctgtaatcccagcactttggaaggccgaggtaggtggatcacctgaggtcaggagttcgagaccagcctgaccaacgtCT i chlSab2.chr16 C 0 I 16 e canFam3.chr9 57424497 416 - 61074082 I e calJac3.chr5 126532051 0 + 159171411 C a score=24666.000000 s hg38.chr17_GL383566v1_alt 58421 15 + 90219 tgaaaccccgtctct s panTro4.chr17 76248075 15 + 82630442 tgaaaccccgtctct i panTro4.chr17 C 0 I 430 s ponAbe2.chr17 67345284 15 + 73212453 tgaaactccatctct i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3674394 14 - 94967081 tgaaaccccAtctc- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74843256 15 + 80904711 tgaaaccccgtctct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74652796 15 + 80997621 tgaaaccccgtctct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68658908 15 + 74645514 tgaaaccccatctct i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e calJac3.chr5 126532051 0 + 159171411 C e chlSab2.chr16 30709951 16 - 75148670 I a score=2730.000000 s hg38.chr17_GL383566v1_alt 58436 2 + 90219 tt s panTro4.chr17 76248520 2 + 82630442 tt i panTro4.chr17 I 430 C 0 s ponAbe2.chr17 67345299 2 + 73212453 TT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74843271 2 + 80904711 tt i rheMac3.chr16 C 0 I 19 s macFas5.chr16 74652811 2 + 80997621 tt i macFas5.chr16 C 0 I 23 s papAnu2.chr16 68658923 2 + 74645514 tt i papAnu2.chr16 C 0 I 15 e nomLeu3.chr14 3674408 0 - 94967081 C e canFam3.chr9 57424497 416 - 61074082 I e calJac3.chr5 126532051 0 + 159171411 C e chlSab2.chr16 30709951 16 - 75148670 I a score=40889.000000 s hg38.chr17_GL383566v1_alt 58438 19 + 90219 ttttttttttttttttttt s panTro4.chr17 76248522 19 + 82630442 ttttttttttttttttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67345301 19 + 73212453 GTTTCTTTTTTCttttttt i ponAbe2.chr17 C 0 I 1266 s nomLeu3.chr14 3674408 19 - 94967081 ttttttcttttcttttttc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74843292 19 + 80904711 ctttttttttttttttttt i rheMac3.chr16 I 19 C 0 s macFas5.chr16 74652836 19 + 80997621 ctttttttttttttttttt i macFas5.chr16 I 23 C 0 s papAnu2.chr16 68658940 19 + 74645514 ctttctttttttttttttt i papAnu2.chr16 I 15 C 0 s chlSab2.chr16 30709967 19 - 75148670 ttttttttttttttttttt i chlSab2.chr16 I 16 C 0 e canFam3.chr9 57424497 416 - 61074082 I e calJac3.chr5 126532051 0 + 159171411 C a score=255820.000000 s hg38.chr17_GL383566v1_alt 58457 155 + 90219 ttgagatggagtttttgctctgttgcccatgctggagtgcgatggcacaatctcggctcactgtaacctccacctcccgggttcaagtgatccttctgcctcagcctcctaagtagctgagattacaggtgcccaccaccacgcccagctaatt-t s panTro4.chr17 76248541 155 + 82630442 ttgagatggagtttttgctctgttgcccacgctggagtgcgatggcacaatctcggctcactgtaacctccacctcccgggttcaagtgatccttctgcctcagcctcctaagtagctgagattacaggtgcccaccaccacgcccagctaatt-t i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3674427 152 - 94967081 ttgagacggagtttttgctctgttgcccagtctggagtgcaatggctcgatctcagctcactgtaacctccacctcctgggttcaagcaattctcctgcctcagcctcctgggtagctgagattacaggtgcccaccaccatgcccagctaa---- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74843311 154 + 80904711 ttgaggtggag-ttttgctctgttgcccaggctgaagtgcaatcgtatgatctcgactcactgtaacctccacctcccgggttcaagcgattctcctgcctcaacctcctgagtagctgggattacaggtgcccaccaccatgcccagctaattt- i rheMac3.chr16 C 0 M 418 s macFas5.chr16 74652855 153 + 80997621 ttgaggtggag-ttttgctctgttgcccaggctgaagtgcaatcgtatgatctcgactcactgtaacctccacctcccgggttcaagcgattctcctgcctcaacctcctgagtagctgggattacaggtgcccaccaccatgcccagctaatt-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68658959 153 + 74645514 ttgaggtggag-ttttgctttgttgcccaggctgaagtgcaatcgtatgatctcgactcactgtaacctctacctcctgggttcaagcgattctcctgcctcaacctcctgagtagctgggattacaggtgcccaccaccatgcccagctaatt-- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30709986 152 - 75148670 ttgaggtggagtttttgctctgttgccctggctgaagtgcaatcgtatgatctcgactcactataacctccacctcccgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccatgcccagctaa---- i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C a score=61188.000000 s hg38.chr17_GL383566v1_alt 58612 55 + 90219 tgtttttgtttttgttttgag--agacgctcactgtgtcgcccaggctagagtgcaa s panTro4.chr17 76248696 55 + 82630442 tgtttttgtttttgttttgag--agacgctcactgtgtcgcccaggctagagtgcaa i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3674579 52 - 94967081 ---ttctgtttttgttttgag--acagtctcgctgtgttgcccaggctggAGTGCAA i nomLeu3.chr14 C 0 M 894 s macFas5.chr16 74653008 57 + 80997621 tgtttttgtttttgttttgagacagagtctcactgtgtagcccaggctggagtgcaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68659112 57 + 74645514 tgtttttgtttttgttttgagacagagtctcactgtgtagcccaggctggagtgcaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30710138 53 - 75148670 ----tttgtttttgttttgagacagagtctcgctgtgtagcccaggctggagtgcaa i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e rheMac3.chr16 74843465 418 + 80904711 M e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C a score=147942.000000 s hg38.chr17_GL383566v1_alt 58667 177 + 90219 aggtgcgatcttggcttattgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcctgagtagctggaattacaggcacgtgccaccaggcctggctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctggtctcgaactcctgacctc s panTro4.chr17 76248751 177 + 82630442 aggtgcgatcttggcttattgcaacctctgcctgctgggttcaagcgattctcctgcctcagcctcctgagtagctggaattacaggcacgtgccaccaggcccggctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctggtctcgaactcctgacctc i panTro4.chr17 C 0 C 0 s macFas5.chr16 74653065 177 + 80997621 tggtgcgatcttggttcactgcaacctcttcctcctgggttcaagtgattctcctacctcagccttctgaatagctgggattacaggcatgcgccaccacacccagctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgacctcttgacctc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68659169 177 + 74645514 tggtgtgatcttggttcactgcaacctcttcctcctgggttcaagtgattctcctacctcagccttctgaatagctgggattacaggcatgcgccaccacacccagctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcaacctcttgacctc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30710191 177 - 75148670 tggtgcgatcttggttcactgcaacctcttcttcctgagttcaagtgattctcctacctcagccttctgagtagctgggattacaggcgtgcgccaccacacccagctaatttttgtatttttagtagagacgaggtttcaccatgttggccaggctggtctcgacctcttgacctc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3674631 894 - 94967081 M e canFam3.chr9 57424497 416 - 61074082 I e rheMac3.chr16 74843465 418 + 80904711 M e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C a score=12999.000000 s hg38.chr17_GL383566v1_alt 58844 55 + 90219 gcaatccacacgacttggcctcccaaagtgctgggattacaggcatgagctactg s panTro4.chr17 76248928 55 + 82630442 gcaatccacacgacttggcctcccaaagtgctgggattacaggcatgagctactg i panTro4.chr17 C 0 C 0 s chlSab2.chr16 30710368 55 - 75148670 gtggtccacctgccccggcctcccaaagtgctgggattataggcatgagccactg i chlSab2.chr16 C 0 I 6 e nomLeu3.chr14 3674631 894 - 94967081 M e canFam3.chr9 57424497 416 - 61074082 I e rheMac3.chr16 74843465 418 + 80904711 M e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C e papAnu2.chr16 68659346 0 + 74645514 C e macFas5.chr16 74653242 0 + 80997621 C a score=7613.000000 s hg38.chr17_GL383566v1_alt 58899 80 + 90219 cacccggctaatttttgtatttttagtagggatgaggtttcaccatgttggccaggctggtctcaacctcttgacctcaa s panTro4.chr17 76248983 80 + 82630442 cacccggctaatttttgtatttttagtagggatgaggtttcaccatgttggccaggctggtctcaacctcttgacctcaa i panTro4.chr17 C 0 C 0 e nomLeu3.chr14 3674631 894 - 94967081 M e canFam3.chr9 57424497 416 - 61074082 I e rheMac3.chr16 74843465 418 + 80904711 M e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C e chlSab2.chr16 30710423 6 - 75148670 I e papAnu2.chr16 68659346 0 + 74645514 C e macFas5.chr16 74653242 0 + 80997621 C a score=30438.000000 s hg38.chr17_GL383566v1_alt 58979 61 + 90219 gtgatccacccgccttggcctcccaaagtgctaggattacaggcgtgagccaccatgcctg s panTro4.chr17 76249063 61 + 82630442 gtgatccacccgccttggcctcccaaagtgctaggattacaggcgtgagccaccgtgcctg i panTro4.chr17 C 0 C 0 s macFas5.chr16 74653242 61 + 80997621 gtggtccacctgccctggcctcccaaagtgctgggattacaggcatgagccactgcgccca i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68659346 61 + 74645514 gtggtccacctgccctggcctcccaaagtgctgggattacaggcatgagccactgcgccca i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3674631 894 - 94967081 M e canFam3.chr9 57424497 416 - 61074082 I e rheMac3.chr16 74843465 418 + 80904711 M e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C e chlSab2.chr16 30710423 6 - 75148670 I a score=133754.000000 s hg38.chr17_GL383566v1_alt 59040 97 + 90219 gcctgaaaccccctctctactaaaaatacaaaattagccaggtgtggtggtgcatgcctgtaatcccagctacttgggagactgaggcaggagaatt s panTro4.chr17 76249124 97 + 82630442 gcctgaaaccccctctctactaaaaatacaaaattagccaggtgtggtggtgcatgcctgtaatcccagctacttgggagactgaggcaggagaatt i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74843892 97 + 80904711 GCCtgaaaccccatctctactaaaaatacaaaattagccaggtgtggtggtgcatgcctataatcccagttacttgggagactgaggcaggagaatc i rheMac3.chr16 M 418 C 0 s macFas5.chr16 74653303 97 + 80997621 gccTgaaaccccatctctactaaaaatacaaaattagccaggtgtggtggtgcatgcctataatcccagttacttgggagactgaggcaggagaatc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68659407 97 + 74645514 gcctgaaaccccatctctactaaaaatacaaaattagccaggtgtggtggtgcatgcctataatcccagttacttgggagactgaggcaggagaatc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30710429 97 - 75148670 gccTgaaaccccatctctactaaaaatacaaaattagccaggtgtggtggtgcatgcctataatcccagctacttgggagactgaggcaggagaatc i chlSab2.chr16 I 6 C 0 e nomLeu3.chr14 3674631 894 - 94967081 M e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C a score=849896.000000 s hg38.chr17_GL383566v1_alt 59137 486 + 90219 acttgaacccgATATATATAG-TGTATGTATATAATAACACTGAGATAggcacagtggctcatgcctgtaatcccagcactttgggaggccaaagtgggaggatggcttgagcccagaagtttcagaccagcctgggcaatagagtgagacaccatctctacagaaaatttgcaaattacccagatgtggtggtgggcacctatagtcccagctattcatgaggctgaggccggaggatcacttaagcccaggaggttgaggctgaagtgagctataatcatactgctgtactccagcctgggagacacagcaagaccctgtctaaaaaaataaat-----a-aataaaataaTATACTAACATTGA-TTTCAAAAAATGTGTCCATGGATAAAAATATAATG-----AATATATTCATCACACATGGATATGTTCCTGGACATATCAGTATATATCATGTATATC--TTTTTTTCCAAAATGTGAAAG-----TAAGTTTATTAT s panTro4.chr17 76249221 486 + 82630442 acttgaacccgATATATATAG-TGTATATATATAATAACACTGAGATAggcacagtggctcatgcctgtaatcccagcactttgggaggccaaagtgggaggatggcttgagcccagaagtttcagaccagcctgggcaatagagtgagaccccatctctacagaaaatttgcaaattacccagatgtggtggtgggcacctatagtcccagctattcacgaggctgaggctggaggatcacttaagcccaggaggttgaggctgaagtgagctataatcatactgctgtactccagcctgggagacagagcaagaccctgtctaaaaaaataaat-----a-aataaaataaTATACTAACATTGA-TTTCAAAAAATATGTCCATGGATAAAAATATAATG-----AATATATTCATCACACATGGATATGTTCCTGGACATATCAGTATATATCATGTATATC--GTTTTTTCCAAAATGTGAAAG-----TAAGTTTATTAT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3675532 500 - 94967081 ACTTGAACCCGATTTATATAGTTTTATATATGTAATAACACTGAGATAggcacagtggctcatgcctgtaatcccagcactttgggaggccaaagtgggaggatggcttgagcccaggagtttgcgaccagcctgggcaatagagtgagaccccatctctacagaaaatttgcagattacccagatgtggtggcgggcacctatagtcccagctactcacgaggttgaggccagaggattacttaagcccaggaggtcgaggctgcagtgagctataatcatactactgcactccagcctgggagacagagcaagaccctgtctaaaaaataaaat-----acaataaaataaTATACTAACATTGA-TTTCAAAAAAAGTGTCCATGGATAAAAATATAATGGATATAATATATTCATCACACATGGGTATGTTCCTGGACATGTCAGCATATATCATGTATATCTTTTTTTTTCCAAAATGTGAAAGTAAAATAAGTTTATTAT i nomLeu3.chr14 M 894 I 310 s rheMac3.chr16 74843989 499 + 80904711 acttgaacctgATATATATAG-TTTATATATATAATAACACTGAGATAggcacagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggaagatggtttgagcccaggagtttgggaacagcctgggcaatagagcgagaccccatgtctacagaaaatttgaaaattacccagatgtggtggcaggcacctatagtcccagctactcatgaggctgaggctgggggatcacttaagcccgggaggtcaaggctgcagtgagctataatcatactactgcactccagcctgggagacagagcaagaccctgtctaaaaaaatgaataaataa-aataaaataaTACACTAACATTGATTTTTTAAAACAGTGTCCATGGATAAAAATATAATGGATATAATATAATCATTGCACATGGATATGTTCCTGGACATATCACTATATATCATGTATATCTTTTTTTCCCCAAAATGTGAAAG-----TAAGTTTATTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74653400 499 + 80997621 acttgaacctgatatatatag-tttatatatataataACACTGAGATAggcacagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggaagacagtttgagcccaggagtttgggaacagcctgggcaatagagcgagaccccatgtctacagaaaatttgaaaattacccagatgtggtggcaggcacctatagtcccagctactcatgaggctgaggccgggggatcacttaagcccgggaggtcaaggctgcagtgagctataatcatactactgcactccagcctgggagacagagcaagaccctgtctaaaaaaatgaataaataa-aataaaataaTACACTAACATTGATTTTTTAAAACAGTGTCCATGGATAAAAATATAATGGATATAATATAATCATTGCACATGGATATGTTCCTGGACATATCAGTATATATCATGTATATCTTTTTTTCCCCAAAATGTGAAAG-----TAAGTTTATTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68659504 499 + 74645514 acttgaacctgatatatatag-tttatatatataataacacagagataggcacagtggctcatgcctgtaatcccagcactttcggaggccaaggtgggaagatggtttgagcccaggagtttgggaacagcctgggcaatagagtgagaccccatctctacagaaaatttgaaaattacccagatgtggtggcaggcacctatagtcccagctactcatgaggctgaggccgggggatcacttaagcccgggaggtcaaggctgcagtgagctataatcatactactgcactccagcctgggagacagagcaagaccctgtctaaaaaaatgaat-----a-aataaaataatacactaacattgatttttttaaaaagtgtccaTGGATAAAAATATAATGGATATAATATAATCATTGCACATAGATATGTTCCTGGACATATCAGTATATAtcatgtatatcttttttttcccaaaatgtgaaagaaaaataagtttattat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30710526 503 - 75148670 acttgaacctgATTTATATAG-TTTATATATATAATAACACTGAGATAggcacagtggcccatgcctgtaatcccagcactttgggaggccaaggtgggaagatggtttgagcccaggagattgggaacagcctgggcaatagagcgagaccccatctctacagaaaatttgaaaattacccagatgtggtggcaggaacctatagtcccagctactcatgaggctgaggccaggggatcacttaagcccaggaggtcaaggctgcagtgagctataatcatactactgcactccagcctgggagacagagcaagaccctatctaaaaaaatgaataaataa-aataaaataaTACACTAACATTGATTTTTAAAAAAAGTGTCTATGGATAAAAATATAATGGATATAATATAATCATTGCACATGGATATGTTCCTGGACATATCAGTATATATCATGTATATCtttttttt-ccaaaatgtgaaagtaaaataagtttattat i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C a score=153672.000000 s hg38.chr17_GL383566v1_alt 59623 99 + 90219 AGAAAATATGGAAAACAGAGAAAAATACAATGAAGAAAATAAGTCACATTTGGTGTATTGCCTTCCTGtatttttatgttttacatttattatgtttta s panTro4.chr17 76249707 99 + 82630442 AGAAAATATGGAAAACAGAGAAAAATACAATGAAGAAAATAAGTCACATTTGGTGTATTGCCTTCCTGTATTTTTATGTTTTACATTTATTATGTTTTA i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676342 83 - 94967081 agaaaatatggaaaacagagaaaaaTACAACGAAGAGAATAAGTCATATGTGGTGTATTGCCTTCCTAtattt----------------ttacgtttta i nomLeu3.chr14 I 310 C 0 s rheMac3.chr16 74844488 99 + 80904711 AGAAAACATGGAAAACAGAGAAAAATACAGTGAAGAAAATAAGTCACACTTGGTGTGTTGCCTTCCTGTATTTTTATGTTTTACAtttattatgtttta i rheMac3.chr16 C 0 I 315 s macFas5.chr16 74653899 83 + 80997621 AGAAAACATGGAAAACAGAGAAAAATACAGTGAAGAAAATAAGTCACACTTGGTGTGTTGCCTTCCTGTATTTTTATGTTTTA---------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68660003 99 + 74645514 agaaaacatggaaaacagagaaaaatacagtgaagaaaataAGTCACACTTGGTGTGTTGCCTtcctgtatttttatgttttacatttattatgtttta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30711029 99 - 75148670 agaaaacatggaaaacagagaaaaatacagtgaagaaaataagtcacacttggtgtgttgccttcctgtatttttatgttttatatttagtatatttta i chlSab2.chr16 C 0 I 312 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C a score=8936.000000 s hg38.chr17_GL383566v1_alt 59722 14 + 90219 catttattatgttt s panTro4.chr17 76249806 14 + 82630442 CATTTATTATGTTT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676425 14 - 94967081 catttattatgttt i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74653982 14 + 80997621 CAtttattatgttt i macFas5.chr16 C 0 I 326 s papAnu2.chr16 68660102 11 + 74645514 ---tgtttctgttt i papAnu2.chr16 C 0 I 3 e canFam3.chr9 57424497 416 - 61074082 I e rheMac3.chr16 74844587 315 + 80904711 I e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C e chlSab2.chr16 30711128 312 - 75148670 I a score=35670.000000 s hg38.chr17_GL383566v1_alt 59736 22 + 90219 tatgtttctgttttCTACAAGA s panTro4.chr17 76249820 22 + 82630442 TATGTTTCTGTTTTCTACAAGA i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676439 22 - 94967081 tatgtttctgttttCTACAAGA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74844902 22 + 80904711 TATGTTTCTGTTTTCTACAAGA i rheMac3.chr16 I 315 C 0 s macFas5.chr16 74654322 22 + 80997621 TATGTTTCTGTTTTCTACAAGA i macFas5.chr16 I 326 C 0 s papAnu2.chr16 68660116 22 + 74645514 tttctttcttttttttttgaga i papAnu2.chr16 I 3 I 1235 s chlSab2.chr16 30711440 22 - 75148670 tatgtttctgttttctacaaga i chlSab2.chr16 I 312 C 0 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C a score=11290.000000 s hg38.chr17_GL383566v1_alt 59758 9 + 90219 ACAAAATCC s panTro4.chr17 76249842 9 + 82630442 ACAAAATCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676461 9 - 94967081 ATAAAATCT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74844924 9 + 80904711 ACAAAATCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74654344 9 + 80997621 ACAAAATCT i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30711462 9 - 75148670 acaaaatct i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e calJac3.chr5 126532051 0 + 159171411 C e papAnu2.chr16 68660138 1235 + 74645514 I a score=197151.000000 s hg38.chr17_GL383566v1_alt 59767 119 + 90219 ggccaggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtaggtaggtcacttgaagtcaagagtttgagaccagcctggccaacatggtgaaaccccgcctctac s panTro4.chr17 76249851 119 + 82630442 ggccaggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggtaggtaggtcacttgaagtcaagagtttgagaccagcctggccaacatggtgaaaccccgcctctac i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676470 119 - 94967081 ggccaggcacagtggctcatgtctgtaatcccagcactttggaaggccaaggtgggcagatgacttgaggtcagaagttcaagaccagcctggccaacacggtgaaaccccacctctGC i nomLeu3.chr14 C 0 M 100 s rheMac3.chr16 74844933 119 + 80904711 gaccaggcacagtggctcatgcctataatcccaccacttcgggaggccaaagtgggcagatcacttgaagtcaggagttcaagaccaacgtggccaacatggtgaaaccctgtctctac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74654353 119 + 80997621 gaccaggcacagtggctcatgcctataatcccaccacttcgggaggccaaagtgggcagatcacttgaagtcaggagttcaagaccaacgtggccaatatggtgaaaccccgcctctac i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30711471 119 - 75148670 gaccaggcacagtggctcacgcctgtaatcccaccacttcgggaggccaaggtgggcagatcacttcaagtcaggagttcaagaccaacctggccaacatggtgaaaccccgcctctac i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126532051 119 + 159171411 ggccaggtgcaatggatcacgcctataatcccagcactttggaaggccgaggtgggtaaatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaagcctgcctttgc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e papAnu2.chr16 68660138 1235 + 74645514 I a score=130510.000000 s hg38.chr17_GL383566v1_alt 59886 137 + 90219 taaaagtaccaaaattagccggg-----------------------------------------------cctggtggcacgtgcctgtaattccagccacttgggaggctgaggcaggagaatcactcaaacccaagaggtggagtttgcagcgagttgaaatcatgctactgcactccaacc s panTro4.chr17 76249970 137 + 82630442 taaaagtaccaaaattagccggg-----------------------------------------------cctggtggcacgtgcctgtaattccagccacttgggaggctgaggcaggagaatcactcaaacccaagaggtggagtttgcagtgagttgaaatcatgctactgcactccaacc i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74845052 134 + 80904711 taaaaa-----------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------gggaggctgaggcaggagaatcactcaaacccgagaggcagagtttgcagtgagttgaaatcgtgccactgcactccaacc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74654472 137 + 80997621 taaaaatacaaaaattagccggg-----------------------------------------------cctggtggcacgtgcctgtaattccagctacttgggaggctgaggcaggagaatcactcaaacccgagaggcagagtttgcagtgagttgaaatcgtgccactgcactccaacc i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30711590 137 - 75148670 taaaagtacaaaaattagccagg-----------------------------------------------cctggtggcatgtgcctgtaattccagctacttgggaggctgaggcaggagaatcactgaaacccgagaggcagagtttgcagtgagttgaaatcatgccactgcactccaacc i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126532170 137 + 159171411 taaaaatacaaaaattagccggg-----------------------------------------------tctggtggtgtgtgcctgtaattccagctactcattaggctgaggcaggagaatcacttgaacctgggaggcagagattgcagtgagctgaaatcgcgccactgcactccagcc i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3676589 100 - 94967081 M e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e papAnu2.chr16 68660138 1235 + 74645514 I a score=130775.000000 s hg38.chr17_GL383566v1_alt 60023 90 + 90219 tgggagacagggtgaaactgcgtctc--------aaaataaataaataaagtaaaaTCTTTATTTACATATAGTACCTGTTGCCTTCATTTTAAAAAT s panTro4.chr17 76250107 90 + 82630442 tgggagacagggtgaaactgcatctc--------aaaataaataaataaagtaaaaTCTTTATTTACATATAGTACCTGTTCCCTTCATTTTAAAAAT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676689 97 - 94967081 TGGGAGACAGAGTGAAAATGTGTCTCACaaaataaaaataaa-aaaaaaagtaaaaTCTTTATTTACATATAGTACCTGTAGCCTTCATTTTAAAAAT i nomLeu3.chr14 M 100 C 0 s rheMac3.chr16 74845186 87 + 80904711 tgggagacagagtgaaactgtgtctc--------aaaaaa---caaaaaagtaaaaTCTTTATTTACATATGGTACCTGTAGCCTTCATTTAAAAAAT i rheMac3.chr16 C 0 I 385 s macFas5.chr16 74654609 87 + 80997621 tgggagacagagtgaaactgtgtctc--------aaaaaa---caaaaaagtaaaaTCTTTATTTACATATGGTACCTGTAGCCTTCATTTAAAAAAT i macFas5.chr16 C 0 I 46 s chlSab2.chr16 30711727 87 - 75148670 tggtagacagagtgaaactgtgtctc--------aaaaaa---cagaagagtaaaatctttatttacatatggtacctgtagccttcatttaaaaaat i chlSab2.chr16 C 0 I 42 s calJac3.chr5 126532307 85 + 159171411 tgggtggcagggcgaaactgtgtctt--------aaaa-----aaaaaGTGTAAAATCTTTATTTACATATAGTACTTGTAGCCTTCATTTAAAAAAT i calJac3.chr5 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e papAnu2.chr16 68660138 1235 + 74645514 I a score=16594.000000 s hg38.chr17_GL383566v1_alt 60113 25 + 90219 Gttttattttattttatta-------------------gagatg s panTro4.chr17 76250197 25 + 82630442 Attttattttattttatta-------------------gagacg i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676786 25 - 94967081 AAtttattttattttatta-------------------gagacg i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74654742 44 + 80997621 attttattttattttatttatttatttatttattttttgagacg i macFas5.chr16 I 46 I 305 s chlSab2.chr16 30711856 22 - 75148670 a-tttattttattttattt---------------------gaca i chlSab2.chr16 I 42 I 1 s calJac3.chr5 126532392 25 + 159171411 AAtttattttattgttttg-------------------gagaca i calJac3.chr5 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e rheMac3.chr16 74845273 385 + 80904711 I e ponAbe2.chr17 67345320 1266 + 73212453 I e papAnu2.chr16 68660138 1235 + 74645514 I a score=182600.000000 s hg38.chr17_GL383566v1_alt 60138 103 + 90219 gagtcttgctctgttgcctgggctggagcgcagtggtgcgatctcagctcactgcaaactctgcctcctggattcaagcaatcctttagcctcagcctccaga s panTro4.chr17 76250222 103 + 82630442 gagtcttgctctgttgcctgggctggagtgcagtggtgcgatctcagctcactgcaaactctgcctcctggattcaagcaatcctttagcctcagcctccgga i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3676811 103 - 94967081 gagtcttgctctgttgcctgggctggagtgcagtggtgcgatctcagctcactgcaaactctgcctcccggattcaagcaatcctttagcctcagcctccaga i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74845658 103 + 80904711 gagtcttgctctgttgttcaggctggagtgcagtggtgcgatctcagctcactgcaaactctgcctcctaggttcaagcaatcctctagcctcagcctccaga i rheMac3.chr16 I 385 C 0 s macFas5.chr16 74655091 103 + 80997621 gagtcttgctctgttgttcaggctggagtgcagtggtgcgatctcagctcactgcaaactctgcctcctaggttcaagcaatcctctagcctcagcctccaga i macFas5.chr16 I 305 C 0 s chlSab2.chr16 30711879 103 - 75148670 gagtcttgctctattgttcaggctagagtgcagtggtgtgatctcagctcactgcaaactctgcctcctaggttcaagcaatcctctagtctcagcctccaga i chlSab2.chr16 I 1 C 0 s calJac3.chr5 126532417 103 + 159171411 aagtcttgctctgttccccgggctggagtgcagtggtgtgatctcagttcactataacctctgcctcctgggtttaagcaatcctctggcctcagcctctgga i calJac3.chr5 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e ponAbe2.chr17 67345320 1266 + 73212453 I e papAnu2.chr16 68660138 1235 + 74645514 I a score=363754.000000 s hg38.chr17_GL383566v1_alt 60241 178 + 90219 gaagctgggattacaggtccgtgccaccatgcccg---actaatttttgtatatttttgtagagacg-tggtttgaccatgtgggccagggtggtcttgaactcctgacgtcaggcaatctg--cctgccg-cagcctcccaaagtgctgggattataggtgtgagccaccgcgcccggccTTAA s panTro4.chr17 76250325 178 + 82630442 gaagctgggattacaggtccgtgccaccacgcccg---actaatttttgtatatttttgtagagacg-tggtttgaccatgtgggccagggtggtcttgaactcctgacatcaggcaatctg--cctgccg-cagcctcccaaagtgctgggattataggtgtgagccaccgcgcccggccTTTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67346586 180 + 73212453 gaagctgggattacaggtccgtgccaccaacgccgggagtaaatttgtgtatattttggtagagacg-tggttttaccatgttggccagggtggtcttgaactcctgacctcaggcaatctg--cctgccg-cagcctcccaaagtgttgggattatagatgtgagccaccgcgcccagccTT-A i ponAbe2.chr17 I 1266 C 0 s nomLeu3.chr14 3676914 177 - 94967081 gaagctgggattacaggtccgtgccaccatgcccg---actaatttttgtatatttttgtagagatg-tggtttcaccatgttggccaggatggtcttgaactcctgacctcaggcaatctg--cctgccg-cagcctcccaaagtgctgggattataggtatgagccaccgcgcccggccTT-A i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74845761 180 + 80904711 gaagctgggattacaggtccttgccaccacgcccg---actaatttttgtatatttttgtagagaca-gggtgccaccatgttggtcagggtagtcttgaactcctgacctcaggcgatctgcaccccccgccaacctcccaaagtgctgggattacgggtgtgagccaccacgacccgccTT-A i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74655194 181 + 80997621 gaagctgggattacaggtccttgccaccacgcccg---actaatttttgtatatttttgtagagacaggggtgtcaccatgttggtcagggtagtcttgaactcctgacctcaggcgatctgcaccccccgccaacctcccaaagtgctgggattacgggtgtgagccaccacgaccggccTT-A i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30711982 180 - 75148670 gaagctgggattacaggtccttgccaccacgcctg---actaatttttgtatatttttgtagagaca-gggtgttaccatgttggtcagggtagtcttgaactcctgacctcaggcgatctgcaccccccgccaacctcccaaagtgctaggattatggatgtgagccaccacgcccagcctt-a i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126532520 176 + 159171411 gaagcggggactacaggcatgctccaccacaccca---gctaatttttgtat-tttttgtagagatg-gggtttcaccatgttggccaggctggtctcaaactcctgacctcaggcaatctg--cccgccc-cagccttccaaagtgctggaattacaggtgtgagccaccgagcccagccTT-A i calJac3.chr5 C 0 C 0 e canFam3.chr9 57424497 416 - 61074082 I e papAnu2.chr16 68660138 1235 + 74645514 I a score=142412.000000 s hg38.chr17_GL383566v1_alt 60419 49 + 90219 AAAAGTAATTTattaaagtgaaattcacataacacaaaatgaaccattt s panTro4.chr17 76250503 49 + 82630442 AAAAGTAATTTattaaagtgaaattcacataacacaaaatgaaccattt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67346766 49 + 73212453 AAAAGTAATTTattaaagtgaaattcacataacacaaaatgaaccattt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3677091 49 - 94967081 AAAAGTAATTTattaaagtgaaattcacataacacaaaatgaaccattt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74845941 49 + 80904711 AAAAGTAATTTattaaagtgaaattcacataacacaaaattaaccattt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74655375 49 + 80997621 AAAAGTAATTTattaaagtgaaattcacataacacaaaattaaccattt i macFas5.chr16 C 0 C 0 s chlSab2.chr16 30712162 49 - 75148670 aaaagtaatttattaaagtgaaattcacataacacaaaattaaccattt i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126532696 49 + 159171411 AAAAATAATTTattgaagtgaaattcacataacacaaaattagccattt i calJac3.chr5 C 0 C 0 s canFam3.chr9 57424913 49 - 61074082 AAAAATAACCTCttgtggtgaaaatcacataaaataaaaataaccattt i canFam3.chr9 I 416 C 0 e papAnu2.chr16 68660138 1235 + 74645514 I a score=525447.000000 s hg38.chr17_GL383566v1_alt 60468 177 + 90219 gaaaatgaacaactcaggggcctttagttcatt--cagtgttgtgctaccaccatctctacctgttccGAGATGGTTCCTCtggttttcattgacacttgtcacagttgagcacactctcccacccagtcagagaacttttatttatttaactctcaacctagtattgaagacttgctt s panTro4.chr17 76250552 177 + 82630442 gaaaatgaacaacttaggggcctttagttcatt--cagtgttgtgcaaccaccatctctacctgttccGAGATGGTTCCTCtggttttcattgacacttgtcacagttgagcacactctcccacccagtcagagaacttttatttatttaactctcaacctagtattgaagacttgctt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67346815 179 + 73212453 gaaaatgaacaactcaggagcctttagttcattcacaatgttgtgcaaccaccacctctgcctgttccGAGATGGTTCCTGTAGCCTTCATTTACGCTCATTACAGTTGAGCACACTCTCCCACCCAATCAGAGAACTTTTatttatttaactctcaacctagtattgaagacttgctt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3677140 179 - 94967081 gaaaatgaacaactcaggggcctttagttcattcacaatgttgtatgaccaccacctctacctgttcccagaTGGTTCCTGTGGCCTTCATTTACACTCGTCACAGTTCAGCGCACTCTCCCACCCAATCAGATAACTTTTatttatttaactctcaacctagtattgaagacttgctt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74845990 179 + 80904711 gaaaatgaacaacttagggacctttagttcattcacaatgttgtataaccaccacctctacttgttccGAGATGGTTCCTGTGGCCTTCATTTACACTCGCCACAGCCAAGCACACTGTCCTACCCAATCAGAGAACTTTTatttatttaactctcaacctagtattgaagacttgctt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74655424 179 + 80997621 gaaaatgaacaacttagggacctttagttcattcacaatgttgtataaccaccacctctacttgttccGAGATGGTTCCTGTGGCCTTCATTTACACTCGCCACAGCCAAGCACACTGTCCTACCCAATCAGAGAACTTTTatttatttaactctcaacctagtattgaagacttgctt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68661373 164 + 74645514 gaaaatgaacaacttaGGGACCTTTAGttcattcacaatgttgtataacCACCACCTCTACTT-TTCCGAGATGGTTCCTGTG-------------CTCGCCACAGCCAAGCACACTGTCC-ACCCCATcagataacttttatttatttaactctcAACCTAGTATTGAAGACTTGCTT i papAnu2.chr16 I 1235 C 0 s chlSab2.chr16 30712211 179 - 75148670 gaaaatgaacaacttagggacctttagttcattcacaatgttgtataaccaccacctctacttgttccgagatggttcctgtggccttcatttacactcgccacagccaagcacactgtcccacccaatcagagaacttttatttatttaactctcaacctagtatcgaagacttgctt i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126532745 179 + 159171411 gaaaatgaataacccaggggccttcagtccattcccagtgttgtacaaacaccacctctacctgttccaAGATGGTTCCTGTGGCCTTCATTCACAGTCGTCGCGGTTAAGCACACTCTCCCACCCAATCTGAGAACTTTTatttatttaactctcaacctagtattaatgacttgctt i calJac3.chr5 C 0 C 0 s canFam3.chr9 57424962 168 - 61074082 -acggcgagcacatcagtggcatgtagcacattcacggcgtG-------TACCGTGTCT---CGTTCTGAAACTTTTCTGGACTCTTCCTTTGGCACTTGCCAGAGCTATGTGAACTCTTCCACCAAACAAGGGGGCTGGTACTTCTTGAACTCTAAAGCTGTCACTGGGCACTTGCTT i canFam3.chr9 C 0 I 53 a score=434742.000000 s hg38.chr17_GL383566v1_alt 60645 156 + 90219 gttttcaatttcttggtcttgtaaatggggctcctacagacacccttgtgcatacctttggtcggactgtc----tatttcctGACGGCAGGGccctgagcaatctcgtcccacagctcagtacccccctctacctggatgactcacagagtta-tatttc s panTro4.chr17 76250729 156 + 82630442 gttttcaatttcttggtcttgtaaatggggctcctacagacacccttgtgcatacctttggtcggactgtc----tatttcctGACGGCAGGGccctgagcaatctcgtcccacagctcagtacccccctctacctggatgactcacagagtta-tatttc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67346994 156 + 73212453 gttttaaatttcttggtcttgtaaatagggctcctacagacatccttgtgcatacctttggtcggattgtc----tatttcctGACGGCAGGGccctgggcaatctcgtcccacagctcagttcccacctctacctggatgactcacagagtta-tatttc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3677319 155 - 94967081 gttttaaatttcttggtcttgtaaatagggctcctacggacacccttgtgcataCCTTTGGTCGGCCTGTC----TGTTTCCTGATGGCAGGGTcctgggcaatctcgtcccacagctcagttcccacctctacctggatgactcac--agttactatttc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74846169 160 + 80904711 gttttgaatctgttggtctcgtaaatggggctcccacggacatccttgtgtatacctttggtcggactgtctgactatttcctGACAGCAGGGCCCTGAGCAatcttgtcccacagctcagttcccacctctacctggatgactcacagagcta-catttc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74655603 160 + 80997621 gttttgaatctgttggtctcgtaaatggggctcccacggacatccttgtgtatacctttggtcggactgtctgactatttcctGACAGCAGGGCCCTGAGCAatcttgtcccacagctcagttcccacctctacctggatgactcacagagcta-catttc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68661537 157 + 74645514 GTTTTGAATCTCTTGGTCTCATAAATGGGGCTCCCATGGACATCCTTGTGTATACCTTTGGTCGGAATGTCTGACTATTTCCTGACAGCAGGGCCCTGAGCAATC---TCCCACAGCTCAGTTCCCACCTCTACCTGGatgactcacagagtta-catttc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30712390 160 - 75148670 gttttgaatctcttggtctcgtaaatggggctcccacggacatccttgtgtatacctttggtcggactgtctgattatttcctGACAGCAGGGCCCTGAGCAatctcgtcccacagctcagttcccacctctacctggatgactcacagagtta-catttc i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126532924 154 + 159171411 gttttaaatttcctggtctcataaataaggctgcaatggacatccttTTGC-TACCTTTGGTGGGAGAGTC----TGTTTCCTGATGGCAGGGccctgggcagtctcatcccacagctcagttcccacctctacccggatgactcacggag-tg-tatttc i calJac3.chr5 C 0 C 0 e canFam3.chr9 57425130 53 - 61074082 I a score=2158803.000000 s hg38.chr17_GL383566v1_alt 60801 701 + 90219 cagcagagactctgcctctgcacaccaacccatatatcccagcgcccacctggtagttccccttggatgcattgaa-cacacaacacgacacgcccagag-ccagcccg---------------tcctctctctgc--aaggtgccacctgccatc---ctgctgctcccgccggaatcctgagagtcatccctggcgattcgcgccccagctcagcctccagatgcagcccaaccccagttctgggtgattttatctttggaattttgctcaaatacattcccatctctccctttccccaacctaggtccaagccagcatttc---ctcttgcctgaagcac-aacctagactcctaaccggactctggtcc-----gtccggtcactccacatctcactgagaaccaagattgcaaaatgcagattagatc--gcctagccctgcttccctctcag-aactttctctgacttcctactcctcttaatataaaaatccaattccttaatgtgt-------ctacaaggcctggttcctccactatgtctccagactctctgggctctgacctccagggccctcttcccattccttgtgtggaccacactccttgcagccacaggacctttgcacaggcca------------------ttctccgccagcaccctcagccctct-gtttttcctggttaatccttgctcatcatcccatctcaacctggtcttccctgccctccaccatgggagagtccc s panTro4.chr17 76250885 701 + 82630442 cagcagagactctgcctctgcacaccaacccatatatcccagcgcccacctgatagttccccttggatgcattgaa-cacacaacacgacacacccagag-ccagcccg---------------tcctctctctgc--aaggtaccacctgccatc---ctgctgctcccgccggaatcctgagagtcatccctgacaattcgcgccccagctcagcctccagatgcagcccaaccccagttctgggtgattttatctttggaattttgctcaaatacattcccatctctccctttccccaacctaggtccaagccagcatttc---ctcttgcctgaagcac-aacctagactcctaaccggactctggtcc-----gtccggtcactccacatctcactgagaaccaagattgcaaaatgcagattagatc--acctagccctgcttccctctcag-acctttctctgacttcctactcctcttaatataaaaatccaattccttaatgtgt-------ctacaaggcctggttcctccactatgtctccagactctctgggctctgacctccagggccctcttcccattccttgtgtggaccacactccttgcagccacaggaactttgcacaggcca------------------ttctccgccagcaacctcagccctct-gtttttcctggttaatccttgctcatcatcccatctcaacctggtcttccctgccctccaccatgggagagtccc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67347150 715 + 73212453 cagcagagactctgcctctg--cacccacccatatatcccagcgcccacctgatagttccccttggatgcattgaa-cacaagacacgacacgcccagag-ccaacccgtcctctctcgctctttcctctctctgc--aaggtaccacctgccatcctgctgctgctcccgctggaatcct--gattcatccctgacaacttgtgcaccagctcagcctccagatgcagcccaaccccaggtctgggtgattttatctttggaattttgctcaaatacattcccatctctccctttccccaacctaggtccaagccagcatttc---ctcttgcctgaagcac-aacctagactcctaactggactctggtcc-----gtctggtcactccacatctcactgagaaccaagattgcaaaatgcagattagatc--gcctagccctgcttccctctcag-acctttctctgacttcctactcctcttaatataaaaatccaattccttaatgtgt-------ctacaaggcctggttcttccactatgtctccagcctctctgggctctgacctccagggccctcttcccattccttgtgtggaccatattccttgcagccacaggacctttgcacaggccg------------------ttctccgccagcaacctcagccctct-gtttttcctggttaatccttgctcatcatcccatctcaacctggtcttccatgccctccaccaggggagagtccc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3677474 710 - 94967081 cagcagagactctgcctttgcacaccaacccatatatcccagcacccacctgatagttccccttggatgcattgaa-cacacaacacgacacgcccagag-ccatcctgtcctctctctt----ttctctctctac--aaggtacttcctgccatc---ctgctgctcccgccagaatcct--gagtcatccctgacaactcgcgccccagctcagcctccagatgcagcccaaccccagttctgggtgattttatctttggaattttgctcaaatacattcccatctctccctttccccaacctaggtccaggctagcatttc---ctcttgcctaacgcac-aacctagactcctaaccggactctggtcc-----gtccggtcactccacatctcactgaaaaccaagattgcaaaacgcagattagatc--gcctagtgctgcttccctctcag-aactttctctgacttcctactcctcttaatataaaaatccagttccttaatgtgt-------ctacaaggcctggttcctccactatgtctccagcctctctgcactctgacctccagggccctcttcccattccttgtgtggaccacattccttgcagccacaggacctttgcacaggcca------------------ttctccgccagcaacctcagccctcT-GTTTTTCCTGGTTAATCCTTGCTCATCATCCCATCTCAACCTGATCTTCCCTGCCCTCCACCAGGGGAGAGTCCC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74846329 724 + 80904711 cagcagagcccccgcctctgcacaccaaaccgtatatccctgcgcccacccagcagttccccttggaggcattgaa-cacacaacacaacatgcccagag-ccagcccgtcctctcttgctctttcctctctctgccaaaggtaccacctgccatc---ctgctgctcctgctggaatcct--gagtcatccctgacaactcgcgccccagctcaacctctagatgcagcccaaccccaggtctggatgattttatctttggaatttcgctcgaatacattcccatctctccctttccccaacctaggtccaagccagcatttc---ctcttgcctgaagcac-aacctagactcctaaccggactctggtccgtccagtccagtcactccacagctcactgagaaccaagattgcaaaatgcagattagatc--gcctagccctgcttccctctcag-acctttctctgacttcctactcctcttaagataaaaatccaattccttaatgtgt-------ctacaaagcctggttcctc---------------ctctccaggcttcgacctccagggccctcttcccattccttgtgtggaccacattccttgcggccacaggacctttgcacaggccaaaggtctttgcactggctttctctgccagcaacctcagccctcT-GTTTTTCCTGGTTAATCCTTGCTCATCATCCCGTCTCAACCTGGTCTTCTCTGCCCTCCACCAGGGGAGAGTCCC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74655763 724 + 80997621 cagcagagcccccgcctctgcacaccaaaccgtatatccctgcgcccacccagcagttccccttggaggcattgaa-cacacaacacaacatgcccagag-ccagcctgtcctctcttgctctttcctctctctgccaaaggtaccacctgccatc---ctgctgctcctgctggaatcct--gagtcatccctgacaactcgcgccccagctcaacctccagatgcagcccaaccccaggtctggatgattttatctttggaatttcgctcgaatacattcccatctctccctttccccaacctaggtccaagccagcatttc---ctcttgcctgaagcac-aacctagactcctaaccggactctggtctgtccagtccagtcactccacagctcactgagaaccaagattgcaaaatgcagattagatc--gcctagccctgcttccctctcag-acctttctctgacttcctactcctcttaagataaaaatccaattccttaatgtgt-------ctacaaagccTGGTTCCTC---------------CTCTCCAGGCTTCGACCTCCAGGGCCCTCTTCCCATTCCTTGTGTGGACCACATTCCTTGCGGCCACAGGACCTTTGCACAGGCCAAAGGTCTTTGCACTGGCTTTCTCTGCCAGCAACCTCAGCCCTCT-GTTTTTCCTGGTTAATCCTTGCTCATCATCCCGTCTCAACCTGGTCTTCTCTGCCCTCCACCAGGGGAGAGTCCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68661694 724 + 74645514 caGCAGAGACCCCGCCTCTGCACACCAAACCATATATCCCTGCGCCCACCCGGCAGTTCCCCTTGGAGGCACTGAA-CACACAACACAACATGCCCAGAG-CCAGCCCGTCCTCTCttgctctttcctctctctgccaAAGGTACCACCTGCCAtc---ctgctgctcctgctggaATCCT--GAGTCATCCCTGACAACTCGCGCCCCAGCTCAACCTCCAGATGCAGCCCAACCCCAGGTCTGGATGATTTTATCTTTGGAATTTCGCTCGAATACATTCccatctctccctttccccaacCTAGGTCCAAGCCAGCATTTC---CTGTTGCCTGAAGCAC-AACCTAGACTCCTAACCGGACTCTGGTCCATCCAGTTCAGTCACTCCACAGCTCACTGAGAACCAAGATTGCAAAATGCAGATTAGATC--GCCTAGCCCTGCTTCCCTCTCAG-ACCTTTCTCTGACTTCCTACTCCTCTTAAGATAAAAATCCAATTCCTTAATGTGT-------CTACAAAGCCTGGTTCCTC---------------CTCTCCAGGCTTCGACCTCCAGGGCCCTCTTCCCATTCCTTGTGTGGACCACATTCCTTGTGgccacaggacctttgcacagGCCAAAGGTCTTTGCACTGGCTTTCTCTGCCAGCAACCTCAGCCCTCT-GTTTTTCCTGGTTAATCCTTGCTCATCATCCCGTCTCAACCTGGTCTTCTCTGCCCTCCACCAGGGGAGAGTCCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30712550 724 - 75148670 cagcagagaccccgcctctgcacaccaaaccgtatatccctgcgcccatccggcagttccccttggaggcgttgaa-cacacaacacaacatgcccagag-ccagcccgtcctctcttgctctttcctctctctgccaaaggtaccacctgccatc---ctgctgctcctgctggaatcct--gagtcatccctgacaactcgcgccccagctcaacctccagatgcagcccaaccccaggtctggatgattttatctttggaatttcgctcgaatacattcccatctctccctttccccaacctaggtccaagccagcatttc---ctcttgcctgaagcac-aacctagactcctaaccagactctggtccgtccagtccggtcactccacagctcactgagaaccaagattgcaaaatgcagattagatc--gcctagccctgcttccctctcag-acctttctctgacttcctactcctcttaagataaaaatccaattccttaatgtgt-------ctacaaagccTGGTTCCTC---------------CTCTCCAGGCTTCGACCTCCAGGGCCCTCTTCCCATTCCTTGTGTGGACCACATTCCTTGCGGCCACAGGACCTTTGCACAGGCCAAAGGTCTTTGCACTGGCTTTCTCTGCCAGCAACCTCAGCCCTCT-GTTTTTCCTGGTTAATCCTTGCTCATCATCCCGTCTCAACCTGGTCTTCTCTGCCCTCCACCAGGGGAGAGTCCC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126533078 714 + 159171411 cagcagagaccccaccactgcacagcaaatggaatatcccagcgcccacccaacaattccccttggacgcactgaa-cacacaacacagcgagcctgggg-ccggcccgtcctctctcgctctttcctctctctgccaaaggccccacctgccatc---ctgctgctcttgccggaatcct--gagtcatccctgacacctcacgcccaggctcagcctccagaggcagcccaaacccaggtctgggtgatttgatctctggaatatcgctcgaatgcattcacatctctccctttccccagctgaggtccaagccagtgtttc---ctcttgcctgcagcac-agctgaggctcctcactgg-ctctggtct-----gtccggtcactccacagttcgatgagaaccatgattgcaaaatgcagatttgatc--agtcagccctgcttccctctcag-acctttctctgacttcctactcctcttaagataaaaatccaattccttcatgtgtctacaggctacaaggcctggttgctccactctctgtgcggcctgtctgggctctgacctccagggccctcttcccattccttatgtggtccaccttccgtgtggccacagggccttcgcacgggca-------------------ttctctgccagcagcctcagccctc---tttttcctggttaatccttgcttatcattccatctcaa-ctggtcttccctgccctccaccagggga----ccc i calJac3.chr5 C 0 C 0 s canFam3.chr9 57425183 608 - 61074082 CAGCCAAGAC-CCGCCTCTG-ACGCTCAAGCACGGAGGCCACGGCCCAGCTGATGGCTCCCCTTGGATGCTTGGAAGCCCCCCACGCCACGCGCCCCAAGCCCAGCGTGTCCTCTGtc-ctctgtcctctctc--------------ccagccatc----------------------cct--gag---------------------------------------gcagcccatccccaggcccag-tgactttacctccagggctctgc-------aatttctctctctgcgtctctccgtcccccccgctggccacccatcctcatccccacccagagcactgacttaggctcct-gctggactctggccc----cctcttgccact-tgcagtccacccagagctgccatttcagagtgccagtctgctcatgccaacccactcctccctcctggaacctttccatgacctccca---ttcttaggacaaaagtccaagtcttcaatgtgc-------ctgtaaggcctgcctcctccaccatctctccagcttctctgggttcaagcctcctgcgtcctcctccagttccttgcagggaccacaaggcctccccccacagggcctctgtacaagcta------------------ttctctgcctgtggtctccttcccctcatttctcctggttaatccttgctcatc--------------------ttcctgacctc-----------agtccc i canFam3.chr9 I 53 C 0 a score=476953.000000 s hg38.chr17_GL383566v1_alt 61502 181 + 90219 tgctctctccttgcacctacttaccctttaccgctgttgtcattttatttggattatatgattatttgatcaacatctgttctccctaccaacgtataagcACTCCATACCGCtcttg---------------------------------ttatttatt----tatttattgagacagagtttccctctgtcgtccaggatagagtgcggcggcgtg s panTro4.chr17 76251586 173 + 82630442 tgctctctccttgcacctacttaccctttaccgctgttgtcattttatttggattatatgattatttgatcaacatctgttctccctaccaacgtataagcACTCCATACCGCtcttg-----------------------------------------t----tatttattgagacacagtttccctctgtcgcccaggctggagtgcagcggcgtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67347865 172 + 73212453 tgctgtctccttgcacctacttaccctttactgctaccgtcattttatttggattatatg---atttgatcaacatctgttctccctaccaacatataagcactgCATACCGCTCGtt---------------------------------------att----tatttattgagacggagtctccctctgtcgtccaggatggagtgcagtggcatg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3678184 177 - 94967081 TGCTGTCTCCTTGCACCTACTTACCCTTTACTGCTATTGTCATTTTATTTGGATTATATGATTATTTGATCAACATCTGTTCTCCCTACCAACGTATAAGCACTCCATACTGCtcttg-------------------------------------ttatt----tatttattgagacagagtctccctctgtcgtccaggatggagtgcagtggcgtg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74847053 209 + 80904711 TGCTCTCTCCTTGTACCTATTTACCCTTTACCGCTATTGTCATTTTATTTGGATTATATGATTATTTGATCAATATCTGTTCTACCTACCAAAGTATAAACACTCCATACCGCTCTTG----gtatgtatgtatgtatgtatgta-tgtatgtatgtatg----tatgtattgagacagagtctccctctgtcatccaggctggagtacagcggcgtg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656487 213 + 80997621 TGCTCTCTCCTTGTACCTATTTACCCTTTACCGCTATTGTCATTTTATTTGGATTATATGATTATTTGATCAATATCTGTTCTACCTACCAAAGTATAAACACTCCATACCGCTCTTGgtatgtatgtatgtatgtatgtatgta-tgtatgtatgtatg----tatgtattgagacagagtctccctctgtcatccaggctggagtacagcggcgtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662418 217 + 74645514 TGCTTTCTCCTTGTACCTATTTACCCTTTACCGCTATTGTCATTTTATTTGGATTATATGATTATTTGATCATTATCTGTTCTACCTACCAAAGTATAAACACTCCATACCGCTcttggtatgtatgtatgtatgtatgtatgta-tgtatgtatgtatgtatttatgtattgagacagagtctccttctgtcatccaggctggagtgcagcggcgtg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713274 205 - 75148670 TGCTCTCTCCTTGTACCTATTTACCCTTTACTGCTATTGTCATTTTATTTGGATTATATGATTATTTGATCAATATCTGTTCTACCTACCAAAGTATAAACACTCCATACCGCTCTTG--------gtatgtatgtatgtatgta-tgtatgtatgtatg----tatgtattgagacagagtctctctctgtcatccaggctggagtacagcggcgtg i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126533792 198 + 159171411 tgctctctccttgcacctacttagcctttatggttactgtcattttatttggattatatgattatttgatcaatgtctgttctccctaccaaagtataagtactccatACTATACTTG----------------TTATttatttattatgttattttatt----tatttattgagacggagtctccctctgttgcccaggctggagtgcagtggcagg i calJac3.chr5 C 0 C 0 e canFam3.chr9 57425791 0 - 61074082 C a score=366741.000000 s hg38.chr17_GL383566v1_alt 61683 134 + 90219 atctccactccctgcaacctccgcctccggggttcaagggattctcctgtctccacctcccaagtagctgggattacaggcccccgacaccacgcctagctaatttttcta-ttttttagtagagatggggtttc s panTro4.chr17 76251759 134 + 82630442 atctccactccctgcaacctccgcctcccgggttcaagggattctcctgtctccacctcccaagtagctgggattacaggcgcctgacaccacgcctagctaatttttgta-ttttttagtagagatggggtttc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67348037 133 + 73212453 ttctccgcttcctgcaacctccgcctcctgggttcaagggattctcctgtctccacctcccaagtagctgggattacaggcccccgacaccatgcctagctaatttttgta--tttttagtagagatggggtttc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3678361 134 - 94967081 ttctctgctccctgcaacctccgcctcccgggttcaagggattctcctgtctccacctcccaagtagctgggattacaggcccccgacaccacgcctagctaatttttgta-ttttttagtagagatggggtttc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74847262 135 + 80904711 atctctgctccctgcaaactccacctgccaggttcaagggattttcctctctccacctcccaagtagctggaattacaggcccccaacaccacgcccggctaatttttgtattttttcagtagagatggggtttc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656700 135 + 80997621 atctctgctccctgcaaactccacctcccaggttcaagggattttcctctctccacctcccaagtagctgggattacaggcccccaacaccacgcccggctaatttttgtattttttcagtagagatggggtttc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662635 135 + 74645514 atctctgctccctgcaaactccgcctcccaggttcaagggattttcctctctccacctcccaagtagctgggattacaggcccccaacaccacgcccggctaatttttgtattttttcagtagagatggggtttc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713479 135 - 75148670 atctctgctccctgcaaactccgcctcccaggttcaagggattttcctctctccacctcccaagtagctgggattacaggcccccaacaccacactcggctaatttttgtatttttttagtagagatagggtttc i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126533990 134 + 159171411 atcttggctcactgcagcctccatctcctgggtccaagcgattctcctgtctcagcgtcccaagtagctgggattacaggcgcccgccaccacacccagctaatttttgta-tttttaagtagagatggggtttc i calJac3.chr5 C 0 M 1674 s canFam3.chr9 57425791 53 - 61074082 atctcccctcc---------------------gacaagaagccctc------------------------------------cctgaccccagacc-------------------------agaggtgacgcttg i canFam3.chr9 C 0 C 0 a score=40048.000000 s hg38.chr17_GL383566v1_alt 61817 20 + 90219 acca-gttggccaggctagtc s panTro4.chr17 76251893 20 + 82630442 acca-gttggccaggctagtc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67348170 21 + 73212453 accatgttggccaggctagtc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3678495 20 - 94967081 acca-attggccTCTCTAGTC i nomLeu3.chr14 C 0 M 100 s rheMac3.chr16 74847397 21 + 80904711 tccatgttggccgggctagtc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656835 21 + 80997621 accatgttggccgggctagtc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662770 21 + 74645514 accatgttggccgggctagtc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713614 21 - 75148670 accatgttggccaggctagtc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57425844 0 - 61074082 C e calJac3.chr5 126534124 1674 + 159171411 M a score=30107.000000 s hg38.chr17_GL383566v1_alt 61837 18 + 90219 ttgaattcctgatctcag s panTro4.chr17 76251913 18 + 82630442 ttgaattcctgatctcag i panTro4.chr17 C 0 M 380 s ponAbe2.chr17 67348191 18 + 73212453 ttgaattcctgatctcag i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74847418 18 + 80904711 ttgaattcctgatctcag i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656856 18 + 80997621 ttgaattcctgatctcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662791 18 + 74645514 ttgaattcctgatctcag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713635 18 - 75148670 ttgaattcctgatctcag i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57425844 9 - 61074082 tagtgtaca--------- i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3678515 100 - 94967081 M e calJac3.chr5 126534124 1674 + 159171411 M a score=29387.000000 s hg38.chr17_GL383566v1_alt 61855 23 + 90219 CTCTTGTCATTTTATTTGGATTT s ponAbe2.chr17 67348209 23 + 73212453 CTCTTGTCATTTTATTTGGATTT i ponAbe2.chr17 C 0 I 600 s rheMac3.chr16 74847436 23 + 80904711 CTCTTGTCATTTTATTTGAATTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656874 23 + 80997621 CTCTTGTCattttatttgaattt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662809 23 + 74645514 ctcttgtcattttatttgaattt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713653 23 - 75148670 CTCTTGTCATTTTATTTGAATTT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57425853 15 - 61074082 ctctcatcgtacctt-------- i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3678515 100 - 94967081 M e calJac3.chr5 126534124 1674 + 159171411 M e panTro4.chr17 76251931 380 + 82630442 M a score=2804.000000 s hg38.chr17_GL383566v1_alt 61878 4 + 90219 ATTC s rheMac3.chr16 74847459 4 + 80904711 ATTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656897 4 + 80997621 atta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662832 4 + 74645514 atta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713676 4 - 75148670 ATTA i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57425868 4 - 61074082 cttc i canFam3.chr9 C 0 C 0 e nomLeu3.chr14 3678515 100 - 94967081 M e ponAbe2.chr17 67348232 600 + 73212453 I e calJac3.chr5 126534124 1674 + 159171411 M e panTro4.chr17 76251931 380 + 82630442 M a score=150784.000000 s hg38.chr17_GL383566v1_alt 61882 92 + 90219 TAAGATTATTTGATCAACATCTGTTTTCCCTATCAAAATATAAGCACCCCATCCT--------GGGGCCCATAATGAGTAATCAAGAAATATATGTTGAg s nomLeu3.chr14 3678615 92 - 94967081 TATGAGTATTTGATCAACATCTGTTTTCCCTACCAAAGTATAAGCACCCCATCCT--------GGGGCCCATAATGAGTAATCAAGAAatatatgttgag i nomLeu3.chr14 M 100 C 0 s rheMac3.chr16 74847463 92 + 80904711 TATGATTATTTGATCAACATCTGTTTTCCCTACCAAAGTATAAGCACCTCATCCT--------GGGGCCCATAATGAGTAATCAAGAAATATATGTTGAg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656901 92 + 80997621 tatgattatttgatCAACATCTGTTTTCCCTACCAAAGTATAAGCACCTCATCCT--------GGGGCCCATAATGAGTAATCAAGAAATATATGTTGAg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662836 92 + 74645514 taTGATTATTTGATCAACATCTGTTTTCCCTACCAAAGTATAAGCACCCCATCCT--------GGGGCCCATAATGAGTAATCAAGAAATATATGTTGAG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713680 92 - 75148670 TATGATTATTTGATCAACATCTGTTTTCCCTACCAAAGTATAAGCACCTCATCCT--------GGGGCCCATAATGAGTAATCAAGAAATATATGTTGAg i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57425872 93 - 61074082 tatgttggcttggttaatgtctgttttcctcacccgactataagca-------ttagggggaagggggccATAATGAGTAACCAAGAAATATATGTTGAG i canFam3.chr9 C 0 C 0 e ponAbe2.chr17 67348232 600 + 73212453 I e calJac3.chr5 126534124 1674 + 159171411 M e panTro4.chr17 76251931 380 + 82630442 M a score=166195.000000 s hg38.chr17_GL383566v1_alt 61974 158 + 90219 gccgggcgtggtggctcatggctgtaatcccaac-actttgggaggtcgaggtg------ggtg-gatcacttgaggt--------caggagttcaaga---------------ccagcctggccaacatggtgaaaccccatctctatt---------------aaaaataccaaaaaatgagccgggtgtggtggcgggcgc s nomLeu3.chr14 3678707 158 - 94967081 gccaggtgtggtggctcatggctgtaatcccaac-actttgggaagtcgaggtg------ggtg-gatcacttgaggt--------caggagttcaaga---------------ccagcctggccaacatggtgaaaccctgtctctatt---------------aaaaatacaaaaaaattagccgggtgtggtggtgcgcgc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74847555 158 + 80904711 gccgtgcgtggtggctcatgcctgtaatcgcaac-actttgggaggtcgaggtg------ggcg-gatcacttgaggt--------caggagttcgaga---------------ccagcctggccaacatggtaaaaccccgtctctatt---------------aaaaatacaaaaaaagtagccaggcatggtggtgtgcac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74656993 158 + 80997621 gccgtgcgtggtggctcatgcctgtaatcgcaac-actttgggaggtcgaggtg------ggcg-gatcacttgaggt--------caggagttcgaga---------------ccagcctggccaacatggtaaaaccccgtctctatt---------------aaaaatacaaaaaaagtagccaggcatggtggtgtgcac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68662928 204 + 74645514 GCCgtgcgtggtggcttatgcctgtaatcccagctactttgggaggccgaggtggagaatggcgtgaacccgtgaggcggagcttgcagtgatctgagatccggccactgcactccagcccggatgacagagcgagactccgtctctaataaaaaaaacaaaaaaaaaaaaacaaaaaaagtagccaggcatggtggtgtgcac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713772 158 - 75148670 gccgtgcgtggtggctcatgcttgtaatcccaac-actttgggaggtcgaggtg------ggca-gatcacttgaggt--------caggagttcaaga---------------ccagcctggccaacatggtaaaaccccatctctatt---------------aaaaatacaaaaaaagtagccaggcatggtggtatgcac i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57425965 0 - 61074082 C e ponAbe2.chr17 67348232 600 + 73212453 I e calJac3.chr5 126534124 1674 + 159171411 M e panTro4.chr17 76251931 380 + 82630442 M a score=37278.000000 s hg38.chr17_GL383566v1_alt 62132 22 + 90219 ctgtagtcccaggtactaggga s ponAbe2.chr17 67348832 21 + 73212453 ctgtattcccaggt-ctaggga i ponAbe2.chr17 I 600 C 0 s nomLeu3.chr14 3678865 22 - 94967081 ctgtagtcccaggtactaggga i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74847713 22 + 80904711 ctgtagtcacaggtactaggga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74657151 22 + 80997621 ctgtagtcacaggtactaggga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68663132 22 + 74645514 ctgtagtcacaggtactaggga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30713930 22 - 75148670 ctgtagtcacaggtactaggga i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57425965 0 - 61074082 C e calJac3.chr5 126534124 1674 + 159171411 M e panTro4.chr17 76251931 380 + 82630442 M a score=230381.000000 s hg38.chr17_GL383566v1_alt 62154 124 + 90219 ggctgaggcatgagaattgcttgaacctgggagggggaggttgcagtgagccgagatggcgccactgcactccagcctgggtgatagagtgagattcttgtctcaaaaaaaaaaaaaa---------------aaaaag s panTro4.chr17 76252316 113 + 82630442 ggctgagg-atgagaattgcttgaacctgggagggggaccttaccgtgcgctgagatggcgccactgcactccagcctgggtgatagagtgagactcttgtctcaaaaaaaaa-------------------------g i panTro4.chr17 M 380 C 0 s ponAbe2.chr17 67348853 117 + 73212453 ggttgagacatgagatctgcttgaacct-ggaggggaaggttgcagcgagccaagatggcagcactacactccagcctgggtgatagagtgagactcttgtctcaaaaaaaaa---------------------aaaga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3678887 139 - 94967081 ggctgaggcatgcaaattgcttgaacctgggagggggaggttgcaatgagctgagacggcgccactacactccagcatgggtgatagagcgagacttttgtctcaaaaaaaaaaaaaatatatatatatacatagaaaa i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74847735 124 + 80904711 ggctgaggcatgagaattgcttgaacctgggagggggagatggcagtgagctgagttggtgccactacaccccagcctgggtgatagagcgagactcttgtctcaaaaaaaataaaaaga--------------aaag- i rheMac3.chr16 C 0 I 25 s macFas5.chr16 74657173 138 + 80997621 ggctgaggcatgagaattgcttgaacctgggagggggagatggcagtgagctgagttggtgccactacaccccagcctgggtgatagagcgagactcttgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaa- i macFas5.chr16 C 0 I 25 s papAnu2.chr16 68663154 132 + 74645514 ggctgaggcatgagaattgcttgaacctgggagggggagatggcagtgagctgagttggcgccactacaccccagcctgggtgatagagcgagactcttgtctcaaaaaaaaaaaaaaaaaagaaaga------aaag- i papAnu2.chr16 C 0 I 25 s chlSab2.chr16 30713952 124 - 75148670 ggctgaggcatgagaattgcttgaacctgggaggaggagatggcagtgagctgagctggcgccactacaccccagcctgggtgatagagcgagactcttgtcgaaagaaagaaagaaaga--------------aaag- i chlSab2.chr16 C 0 I 164 e canFam3.chr9 57425965 0 - 61074082 C e calJac3.chr5 126534124 1674 + 159171411 M a score=47071.000000 s hg38.chr17_GL383566v1_alt 62278 20 + 90219 aaaaagaaaTATATGTTGAA s panTro4.chr17 76252429 20 + 82630442 aaaaagaaaTATATGTTGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67348970 20 + 73212453 atagaaaaaTATATGTTGAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3679026 20 - 94967081 aaaaataaatatatGTTGAA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74847884 20 + 80904711 aaaaagaaaTATATGTTGAA i rheMac3.chr16 I 25 C 0 s macFas5.chr16 74657336 20 + 80997621 aaaaagaaaTATATGTTGAA i macFas5.chr16 I 25 C 0 s papAnu2.chr16 68663311 20 + 74645514 aaaaagaaatatatgttgaA i papAnu2.chr16 I 25 C 0 s chlSab2.chr16 30714240 20 - 75148670 AAAAAGAAATATATGTTGAA i chlSab2.chr16 I 164 C 0 e canFam3.chr9 57425965 0 - 61074082 C e calJac3.chr5 126534124 1674 + 159171411 M a score=1243821.000000 s hg38.chr17_GL383566v1_alt 62298 457 + 90219 TCAGTAAATG-----AAAAagcaatgtaattacc-aggacaaagcacatgggcatttggaaagctctggaggatatttccagagtgctttccggaagggtggtagcacggaacacttgcaccaggcatatgggagggtctgcgtagccacgccttcaccaTAAATTTCACACATGTAGCAAAGCTTCAGTCATCTAACAAGTGCAAGCCCCCGGGCCAGCCATAAAGTGAGAGTACAGTCAGCAGCAGACGCTGAGCCAAGCAGGCAGAGAGCAGCTGA-CTGAGTCAAAGATGAAAAGGTGGCCACAGACCTGGCGTGTCTGGGCCCCTCTGGAGCCAGAAGACAGGAACCATC----TCCCTGGTTGCCTGTTAAAGCCACGTCTAATCATTCAGGCCTGGAAGTCTGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTGACAGAAG--Aggctgagcatggtgg s panTro4.chr17 76252449 457 + 82630442 TCAGTAAATG-----AAAAagcaatgtaattacc-aggacagagcacatgggcatttggaaagctctggaggatatttccagagtgctttccggaagggtggtagcacggaacacttgcaccaggcatatgggagggtctgcgtagccacgccttcaccaTAAATTTCACACATGTAGCAAAGCTTCAGTCATCTAACAAGTGCAAGCCCCCGGGCCAGCCGTAAAGTGAGAGTACAGTCAGCAGCAGACGCTGAGCCAAGCAGGCAGAGAGCAGCTGA-CTGAGTCAAAGATGAAAAGGTGGCCGCAGACCTGGCGTGTCTGGGCCCCTCTGGAGCCAGAAGACAGGAACCATC----TCCCTGGTTGCCTGTTAAAGCCACGTCTAATCATTCAGGCCTGGAAGTCTGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTGACAGAAG--Aggctgagcatggtgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67348990 457 + 73212453 TCAGCAAATG-----AAAAAGCAATGTAATTACC-AGGACAAAGCACATGGGCATTTGGAAAGCTCTGGAGGATATTTCCAGAGTGCTTTCCGGAAGGGTGGTAGCACGGAACACTCGCACCAGGCATATGGGAGTCTCTGCGTAGCCACGCCTTTACCGTAAATTTCACACATGCAGCAAAGCTTCAGTCATCTAACAAGTGCAAGCCCCCGGGCCAGCCATAAAGTGAGAGTACAGTCAGCAGCAGACGCTGAGCCAAGCAGGCAGAGAGCAGCTGA-CTGAGTCAAAGATGAAAAGGTGGCCGCAGACCTGGCGTGTCTGGGCCCCTCTGGAGCCAGAAGACAGGAACCATC----TCCCTGGTTGCCTGTTAAAGCCACGTCTAATCATTTAGGCCTGGAAGTCTGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTGATGGAAG--Aggctgagcacagtgg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3679046 451 - 94967081 TCAGCAAATG-----AAAAagcaatgtaattacc-aggacaaagcacatgggcatttggaaagccctggaggatatttccagagtgctttccggaagggtggtagcagggaa------caccaggcatatgggagtctctgcgtagccacgcctttaccaTAAATTTCACACATGCAGCAAAGCTTCAGTCATCTAACAAGTACAAGCCCCCGGGCCAGCCATAAAATGAGAGTACAGTCAGCAGCAGACGCTGAGCCAAGCAGGCAGAGAGCAGCTGA-TTGAGTTAAAGATGAAAAGGTGGCCGCAGACCTGGCATGTCTGGGTCCCTCTGGAGCCAGAAGACAGGAACCATC----TCCCTGGTTGCCTGTTAAAGCCACGTCTAATCATTCAGGCCTGGAAGTCCGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTGACAGACC--Aggctgagcatggtgg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74847904 457 + 80904711 TCAGCAAATG-----AAAAagcagtgtaattacc-aggacaaagcacatgggcatttggaaaattctggaggatatttctagagtgctttccagaagggtggtagcaaggaacactcgcaccaggcatatgggagtgtctgcgtatccacgcctttaccaTAAATTTCACACATGCAGCAAAGCTTCAATCATCTAACAAGTGCAAGCCCCCAGGCCAGTCATAAAGTGAGAGTACAGTCAGCAGCAGACGCTGAGCCAAGCAGGCGGAGAGCAGCTGA-CTGAGTCAAAGATGCAAAGGTGGCCCCAGAGCCGGCGTGTCTGGGCCCTTCTGGAGCCAGAAGACAGGAACAGTC----TCCCTGGTTGCCTGTCAAAGCCACGTCTAATCATTCAGGCCTGGAAGTCTGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTAACAGAAG--Aggctgagcacggtgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74657356 457 + 80997621 TCAGCAAATG-----AAAAagcagtgtaattatc-aggacaaagcacatgggcatttggaaaattctggaggatatttctagagtgctttccagaagggtggtagcaaggaacactcgcaccaggcatatgggagtgtCTGCGTATCCACGCCTTTACCATAAATTTCACACATGCAGCAAAGCTTCAATCATCTAACAAGTGCAAGCCCCCAGGCCAGTCATAAAGTGAGAGTACAGTCAGCAGCAGACGCTGAGCCAAGCAGGCGGAGAGCAGCTGA-CTGAGTCAAAGATGCAAAGGTGGCCCCAGAGCCGGCGTGTCTGGGCCCTTCTGGAGCCAGAAGACAGGAACAGTC----TCCCTGGTTGCCTGTCAAAGCCACGTCTAATCATTCAGGCCTGGAAGTCTGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTAACAGAAG--Aggctgagcacggtgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68663331 457 + 74645514 TCAGCAAATG-----AAAAAGCAGTGTAATTACC-AGGACAAAGCACATGGGCATTTGGAAAATTCTGGAGGATATTTCCAGAGTGCTTTCCAGAAGGGTGGTAGCAAGGAACACTCGCACCAGGCATATGGGAGTGTCTGCGTAGCCACGCCTTTACCATAAATTTCACACATGCAGCAAAGCTTCAATCATCTAACAAGTGCAAGCCCCCAGGCCAGTCATAAAGTGAGAGTACAGTCAGCAGCAGACGCTGAGCCAAGCAGGCAGAGAGCAGCTGA-CTGAGTCAAAGATGCAAAGGTGGCCCCAGAGCCGGCGTGTCTGGGCCCTTCTGGAGCCAGAAGACAGGAACAATC----TCCCTGGTTGCCTGTCAAAGCCACGTCTAATCATTCAGGCCTGGAAGTCTGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTAACAGAag--aggctgagcacggtgg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30714260 457 - 75148670 TCAGCAAATG-----AAAAagcagtgtaattacc-aggacaaagcacatgggcatttggaaaattctggaggatatttccagagtgctttccggaagggtggtagcaaggaacactcgcaccaggcatatgggagtgtctgcgtagccacacctttaccaTAAATTTCACACATGCAGCAAAGCTTCAATCATCTAACAAGTGCAAGCCCCCGGGCCAGTCATAAAGTGAGAGTCCAGTCAGCAGCAGACGCTGAGCCAAGCAGGCAGAGAGCAGCTGA-CTGAGTCAAAGATGCAAAGGTGGCCCCAGAGCCGGCGTGTCTGGGCCCTTCTGGAGCCAGAAGACAGGAACAATC----TCCCTGGTTGCCTGTCAAAGCCACGTCTAATCATTCAGGCCTGGAAGTCTGGG-GAAGCGGCAGAG--GAAAGGACTGGAAAGAAGTTAACAGAAG--Aggctgagcacggtgg i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57425965 446 - 61074082 TCAGCCAGTGAAAAAAAAAAACAACATAATTAAAGAggacaaagcacacgagcgttt-taagcccttgacacattttgccgaagtgctttctggacaggtgggagcagcatacactcccacATTGCACATGCAGGTGTA-GAGTGGCCACACCTTTACCGTAAATTCTGCACACGCAGCCAGGCCTCAGTCATCAGACAAGTTGGAGCTCAGGGAC--GGTGT-GAGTCGGAGAACAGTCAGCAGCAGACGT----------------------GCTGAGCTGAGCCAAAGAAACGAAGTTAGCCACACGGCTGGCGTGACCGTGCCCCTCCCAGGACGGAGGGCAGGAGCGATCCATATCCTGGATGACTTGTCAGATCCGAGGCTGACCACTCGGGCCTGGAAACCGGGGTGGGATGACCGGGGCGGGGGGACCAGCAAGACGTTGACAGAAGACAGGGAAGACACGGTGG i canFam3.chr9 C 0 I 3037 e calJac3.chr5 126534124 1674 + 159171411 M a score=3149446.000000 s hg38.chr17_GL383566v1_alt 62755 1417 + 90219 ctcacacctgtaatcccagcattttgggaggctgaggtgagcagatcacaaggtcaggagttcaagaccagcctggccaatatcgtgaaaccccctgtctactaaaaaaaaaacaaaaaacacaaaaattagctgggcgtggtggcacgcacctgtagtcccagctactcgggaggctgaggcagaagaattgcttgaacctgggaggcagaggttgcagtgagttgagatcatgccactgcactccagcctgggcgacagagtgagactctgtctc------aaaaaaaaaaaaaTGTTGAcaga----agagaagaaaaggcaggcggaggtggcagagctcagagacagaggcaggtgtcagaggcagtggcGGGCTCAGGAGGTCTCACATCTGCTGCCAGTGTGAGAAGGTCTGCTCTGgggaccgtctggggctcatcggctcacacttctggcactggggctgggaagatttgaagatcaggactgctgaccagggcacctacgtggggcttccccatggtgtgttgatcctaagatgactgcagtgatccttgtctcctggtactcacagcctctgtagctcctttctaagcaacagaatatacctctgtgcaacaatcaggTTGCAAGAGATTCTCATTTTCCTCTTGgcagcagactcccttccttattggctttgataggccgagtggctacgttgggaaggcccacacaggaggagcccatttctagctggctaagaactcaggtgctctgtctttgagccacctttttatttttatttac--------ttttatttta--tttttgagatagggtcttgctctgtcactcaggctgaagtgcagtggtacaatcacagctcac-----------tgcagcctcaacctcctgggctgaagcaatcttcccacctccgcctcctgggtagctgggactacaggcatgcatcgctgtgcctggctaactttaaattttgtgtagagacagggtctcactacgttgcccaggctagtctca-------------------aacttctgagctcaagctatcctcctgcctcagcctcccaaaatgctgggattacaggtgtgagccactatacctggcccttcaagacttaaagaaatgaaattctgcaccaggtatggtgcctcatgcctgtaatcccagcactttgggaggccgaggcaggcggatcacatgaggtcaggaatttgagagcaggctggccaacatgatgaaaccccctatctactaaaaacacaaaaattagccaggtctgatggcaggtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaagctgggaggcagaggttgcagtgagctgagatcacgccactgcactccagcctgggcaacaagagtgaaactccgtctc----aaaacaa---aacaacaacaaaaaacaaaa s panTro4.chr17 76252906 1428 + 82630442 ctcacacctgtaatcccagcattttgggaggctgaggagagcagataacaaggtcaggagttcaagaccagcctggccaatatcgtgaaacccc--gtctactaaaaa------aaaaaatacaaaaattagctgggcgtggtggcatgcacctgtagtcccagctactcgggaggctgaggcagaagacttgcttgaacctgggaggcggaggttgcagtgagttcagatcatgccactgcactccagcctgggtgacagagtgagactctgtctc-aaaaaaaaaaaaaaaaaaTGTTGACAGA----AGAGAAGAAAAGGCAGGCGGAGGTGGCAGAGCTCAGAGACAGAGGCAGGTGTCAGAGGCAGTGGTGGGCTCAGGAGGTCTCACATCTGCTGCCAATGTGAGAAGGTCTGCTCTGgggaccgtctggggctcatcggctcacacttctggcactggggctgggaagattcgaagatcaggactgctgaccagggcacctacttggggcttccccatggtgggttgATtctaagatgactgcagtgatccttgtctcctggtattcacggcctctgtagctcctttctaagcaacagaatatacctctgtgcaacaatcaggTTGCAAGAGATTCTCATTTTCCTCTTGGCAGCAGACTCCGTTCCTTGTTGGCTTTGATAGGCCGAGTGGCTATGTTGGGAAGGCCCACACAGGAAGAGCCCAGTTCTAGCTGGCTAAGAACCCAGGTGCTCTGTCTTTGAGCCACCTTTTTATttttatttac---ttttattttatttta--tttttgagatagggtcttgctctgtcactcaggctgaagtgcagtggtacaatctcctgtcactcaggctgaagtgcagccgcaacctcctgggctgaagcaatcttcccacctctgcctcctgggtagctgggactacaggcatgcatcactgtgcctggctaactttaaattttgtggagagacagggtctcactacgttgcccaggctagtctca-------------------aacttctgagctcaagctatcctcctgcctcagcctcccaaaatgctgggattacaggtgtgagccactatacctggccCTTCAAGACTT-----AATGAAATTCTGCAccaggtatggtgccccatgcctgtaatcccagcactttgggaggcccaggcaggcggatcacatgaggtcaggaatttgagagcaggctggccaacatgatgaaaccccctatctactaaaaacacaaaaattagccaggtctggtggcaggcgcctgtagtcccagctactcgggaggctaaggcaggacaattgctcgaagctgggaggcagaggttgcagtgagctgagatcacgccactgcactccagcctgggcaacaagagtgaaactccgtctc----aaaacaaaacaacaacaacaaaaaacaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67349447 1395 + 73212453 ctcacacctgtaatcccagcattttgggaggctgaggcgagcagatcacaaggtcaggagttcaagaccagcctggccaatatcgtgaaaccccgtgtctactaaa--------aaaaaatacaaaaattagctgggcgtggcggcacgcgcctgtagtcccagctacttgggaggctgaggcagaagacttgcttgaacctgggaggcggaggttgcagtgagttgagatcatgccactgcactccagcctgggtgacagagtgagactctgtctc------aaaaaaaaaa-----ttgacagaagagagagaagaaaaGGCAGGCAGAGGTAGCAGAGCTCAGAGACAGAGGCAGGTGTCAGAGGCAGTGGCGGGCTCAGGAGGTCTCAGATCTGCTGCCAATGTGAGAAGGTCTGCTCTGgggaccatctggggctcatcagctcacacttctggcactggggctgggaagattcgaagatcaggactgctgaccagggcacctacttggggcttccccatggtgggttgATtctaagatgactgcagtcatccttgtctcctggtactcatggcctctgtagctcctttctaAGCAACAGAATATACCTCTGTGCCACAAGCAGGTTGCAAGAGATTCTCATTTTCCTCTTGGCAGCAGACTCCCTTCCTTGTTGGCTTTGATAGGCCGAGTGGCTATGTTGGGAAGGCCTACACAGGAGGAGCCCAGTTCTAGCTGGCTAAGAACTCAGGTGCTCTGTCTTTGAGCTGCCTTTTTAtttttatttac---ttttattt--tttta--tttttgagataaggtcttgctctgtcactcaggctgaagtgcagtggtacaatcacagctcac-----------tgcagcctcaacctc---------------cttcccacctccgcctcctgggcagctgggactacaggcatacatcactgtgcctggctaactttaaattttgtgtagagacagtgtctcactatgttgcccaggctagtgtca-------------------aacttctgagctcaggctatcctcctgcctcagcctcccaaaatgctgggattacaggtgtgagccactgtacctggccCTTCAAGACTTAAAGAAATGAAATTCTGCAccaggcatggtgcctcatgcctgtaaacccagcactttgggaggccgaggcaggtggatcagctgagttcaggaatttgagagcacgctggccaacatggtgaaaccccatatctactaaaaatgcaaaaattagccaggtctggtggcaggcgcctgtagtcccagctactcgggaggctgaggcaggagaatcgctcgaacctgggaggcggaggtcacagtgagctgagatcatgcggctgaactccagcctgggtgac-agagtgaggatctgtctc---aaaaacaa---aacaac-acaaaaaaCCCAA i ponAbe2.chr17 C 0 I 37 s nomLeu3.chr14 3679497 1374 - 94967081 ctcatgcctgtaatcccagcattttgggaggctgaggcgagcagatcacaaggtcaggagttcaagaccagcctggccaatatggtgaaactccgtgtctactaaaa-------aaaaaatacaaaaatcagctgggcgtggtggcatgcacctgtagtcccagctactcgggaggatgaggcagaagaattgcttgaacctgggaggtggaggttgcagtgagttgagatcatgccactgcactccagcctgggcgacagagtgagactctgtctc---aaaaaaaaaaaaaaaaaGTTGACAGAagagagagaagaaaaggcaggcggaggtagcagagctcagagacagaggcaggtgtcagaggcagtggcGGGCTCAGGTGGTCTCAGATCTGCTGCCAATGTGAGAAGGTCTGCTCTGGGGACCGTCTGGGGCTCATCGGctcacagttctggcactggggctgggaagattcgaagatcaggactgctgaccagggcacctacttggggcttccccatggtgggttgattctaagatgactgcagtgatccttgtctcctggtactcatggcctctgtggctcctttctaAG---------------------------------------------CATTTTCCTCTTGGCAGCAGACTCACTTCCTTGTTGGCTTTGATAGGCCGAGTGGCTATGTTGGGAAGGCCCGCACAGGAGGAGCCCAGTTCTAGCTGGCTAAGAACTCAGGTGCTCTGTCTTTGAGCCGCCTTTTTATTTTTAtttacttattttattttattttatttttttgagatagggtcttgctctgtcactcaggctgaagagcagtggtacaatcacagcttac-----------tgcagcctcaacctcctgggctgaagcaatcttcccacctccgcctcgtgggtagttgggactccaggcatgcatcactgtgccgggctaattttaaattttgtgtagaaacagggtctcactacgttgcccaggctcatctca-------------------aacttctgagctcaagctatcctcctgcctcagcctcccaaaatgctgggattacaggtgtgagccattgtacctggccCTTCAAGACTTCAAGAAACGAAATTCTGCAccaggcatggtgcctcatgcctgtaatcccagcactttgggaggccaaggcacgcagatcacatgaggtcaggaatttgagagcaagctggccaacatggtgaaaccctgtatctactaaaaacacaaaaattagccaggtctggtggcaggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagattgcgccactgcactccagcctgggcgac-agagtgagactccgtctc----aaaaaaa---aaaaaaaaaaaaa------- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74848361 1380 + 80904711 ctaacacctatattcccagcattttgggaggctgaggtgggcagattacaaggtcaggagttcaagaccagcctggccaatatggtgaaaccccatctctactaaaaaaa----aaaaaatacaaaaattagctgggcatggtggcgcatgcctgtagttccagctactcgggaggctgaggcaggagaattgcttgaacccgggaagcagaggttgcagtgagctgagatcatgacactgcactccagcctgggcgacagagtaagactccgtctt----aaaaaaaaaaaaaaaaGGTGACAGAAGAGAGAGAAGAAAATGCAGGCAGAGGTAGCAGAGCTCAGAGACAGAGGCAGATGTCAGAGGCAGTGGCGGGCTCAGGAGGTCTCAGATCTGCTGCCAGTGGGAGAAGAGCTGCTCTGgggaccgtctggggatcatcagctcacacttctggcactggggctgggaagattcgaaaatcaggactgctgaccagggcacctacttggggcttctccatggtaggttgcttctaagatgactgcagcgatccttgtctcct-gtactcatggcctctgtagctcctttctaAGCAACAGA--ATACCTCCGTGCCACAATCAGGTTGCAAGAGATTCTCATTTTCCTCTTGGCAGCAGACGCCCTTCCTTGTTGACTTTGATAGACTGAGTGGCTATGTTGGGAAGTCCCACACAGGAGGAGCCCAGTTCTAGCTGACTAAGAACTCAGGTGC----TCTTTGAGCTGCCtttttatttttatttac--------ttttattt----tttttgagatacgatcttg--ctgtcacccaggctgaagtgcagtggtacaatcatagctcac-----------tgcagcctcaacctcctgggctcaagcaatcttcccacctcagcctcctgggtagctggaactacaggcatgcatcactgtgcctggctaactttaaattttgtgtagagacagggtctcactatgttgcccaggctagtctcannnnnnnnnnnnnnnnnnn-----------------------cctgcctcagcctcccaaaatgctgggattacaggtgtgagccactgtacctggccCTTCAAGACTTCAAGAAATGAAATTCTGTAccaggcatggtgcctcatgcctgtaatcccagcaatttgggaggccgaggcaggtggatcacctgaggtcaggaattagagagtaggctggccaatgtggtgaaaccccatatctactaaaaatacaaaaattagccaggtctggtggtaggcgcctgtagtcccagctacttgggaggctgaggcaggagaattgtttgaatctgggaggcagaggttgcagtgagctgagatcacaccactgcactccagcctgggcaacaagagtgaaactccatctc----aaa--------------------------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74657813 1388 + 80997621 ctaacacctatattcccagcattttgggaggctgaggtgggcagatcacaaggtcaggagttcaagaccagcctggccaatatggtgaaaccccatctctactaaaaaaa----aaaaaatacaaaaattagctgggcatggtggcgcatgcctgtagttccagctactcgggaggctgaggcaggagaattgcttgaacccgggaagcagaggttgcagtgagctgagatcatgacactgcactccagcctgggcgacagagtaagactccgtcttaaaaaaaaaaaaaaaaaaaaGGTGACAGAAGAGAGAGAAGAAAATGCaggcagagttagcagagctcagagacagaggcagatgtcagaggcagtggcGGGCTCAGGAGGTCTCAGATCTGCTGCCAGTGGGAGAAGAGCTGCTCTGgggaccgtctggggatcatcagctcacacttctggcactggggctgggaagattcgaaaatcaggactgctgaccagggcacctacttggggcttctccatggtaggttgcttctaagatgactgcagcgatccttgtctcct-gtactcatggcctctgtagctcctttctaAGCAACAGA--ATACCTCCGTGCCACAATCAGGTTGCAAGAGATTCTCATTTTCCTCTTGGCAGCAGACGCCCTTCCTTGTTGACTTTGATAGACTGAGTGGCTATGTTGGGAAGTCCCGCACAGGAGGAGCCCAGTTCTAGCTGACTAAGAACTCAGGTGC----TCTTTGAGCTGCCtttttatttttatttac--------ttttattt----tttttgagatacgatcttg--ctgtcacccaggctgaagtgcagtggtacaatcatagctcac-----------tgcagcctcaacctcctgggctcaagcaatcttcccacctcagcctcctgggtagctggaactacaggcatgcatcactgtgcctggctaactttaaattttgtgtagagacagggtctcactatgttgcccaggctagtctca-------------------aacttctgagctcaagctatcctcctgcctcagcctcccaaaatgctgggattacaggtgtgagccactgtacctggccCTTCAAGACTTCAAGAAATGAAATTCTGTAccaggcatggtgcctcatgcctgtaatcccagcaatttgggaggccgaggcaggtggatcacctgaggtcaggaatttgagagtaggctggccaacgtggtgaaaccccatatctactaaaaatacaaaaattagccaggtctggtggtaggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgctggaacccgggaggcagaggttgcagtgagctgagatcacaccactgcactccagcctgggcaacaagagtgaaactccatctc----aaa--------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68663788 1386 + 74645514 ctaacacctatattcccagcattttgggaggctgaggtgggcagatcacaaggtcaggagttcaagaccagcctggccaatatggtgaaaccccatctctact-----aa----aaaaaatacaaaaattagctgggcatggtggtgcatgcctgtagttccagctactcaggaggctgaggcaggagaattgcttgaacccgggaagcagaggttgcagtgagctgagatcatgacactgcactccagcctgggcgacagagtaagactccgtctt---taaaaaaaaaaaaaaaaggtgacagaagagagagaagaaaaggcaggcagaggtagcagagctcagagacagaggcaggtgtcagaggcagTGGCGGGCTCAGGAGGTCTCAGATCTGCTGCCAGTGGGAGAAGAGCTGCTCTGGGGACCGTCTGGGGATCATCGGCTCACACTTCTGGCACTGGGGCTGGGAAGATTCGAAAATCAGGACTGCTGACCAGGGCACCTACTTGGGGCTTCTCCATGGCAGGTTGTTTCTAAGATGACTGCAGCGATCCTTGTCTCCTGGTACTCATGGCCTCTGTAGCTCCTTTCTAAGCGACAGA--ATACCTCCGTGCCACAATCAGGTTGCAAGAGATTCTCATTTTCCTCTTGGCAGCAGACTCCCTTCCTTGTTGACTTTGATAGACTGAGTGGCTATGTTGGGAAGTCCCGCACAGGAGGAGCCCAGTTCTAGCTGACTAAGAACTCAGGTGC----TCTTTGagctgcctttttatttttatttac---ttttattttattt----tttttgagatagggtcttg--ctgtcacccaggctgaagtgcagtggtacaatcatagctcac-----------tgcagcctcaacctcctgggctcaagcaatcttcccacctcagcctcctgggtagctggaactacaggcatgcatcactgtgcctggctaactttaaattttgtgtagagacagggtctcactatgttgcccaggctagtctca-------------------aacttctgagctcaagctatcctcctgcctcagcctcccaaaatgctgggattacaggtgtgagccactgtacctggcccttcAAGACttcaagaaatgaaattctgcaccaggcatggtgcctcatgcctgtaatcccagcaatttgggaggccaaggcaggtggatcacctgaggtcaggaatttgagagcaggctggccaacgtggtgaaaccccatatctactaaaaatacaaaaattagccaggtctggtggtaggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgctggaacccgggaggcagaggttgcagtgagctgaaatcacaccactgcactccagcctgggcaacaagagtgaaactccatctc----aaa--------------------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30714717 1391 - 75148670 ctaacacctatattcccagcattttgggaggctgaggtgggcagatcacaaggtcaggagttcaagaccagcctggccaatatggtgaaaccccatctctact-----aa----aaaaaatacaaaaattagctgggcatggtggcgcatgcctgtagttccagctactcaggaggctgaggcaggagaattgcttgaacccgggaagcagaggttgcagtgagctgagatcatgacactgcactccggcctgggcgacagagtaagactccgtctt--aaaaaaaaaaaaaaaaaaGGTGACAGAagagagagaagaaaaggcaggcagaggtagcagagctcagagacagaggcagatgtcagaggcagtggcGGGATCAGGAGGTCTCAGATCTGCTGCCAGTGGGAGAAGAGCTGCTCTGgggaccgtctggggatcatcggctcacacttctggcactggggctgggaagattcgaaaatcaggactgctgaccagggcacctacttggggtttctccatggtaagttgcttctaagatgactgcagcgatccttgtctcctggtactcatggcctctgtagctcctttctaAGCAACAGA--ATACCTCCGTGCCACAATCAGGTTGCAAGAGATTCTCATTTTCCTCTTAGCAGCAGACTCCCTTCCTTGTTGACTTTGATAGACTGAGTGGCTATGTTGGGAAGTCCTGCACAGGAGGAGCCCAGTTCTAGCTGACTAAGAACTCAGGTGC----TCTTTGAGCTGCCTTTTTAtttttatttac---ttttattttattt----tttttgagatagggtcttg--ctgtcacccaggctgaagtgcagtggtacaatcacagctcac-----------tgcagcctcaacctctggggctcaagcaatcttcccacctcagccttctgggtagctggaactacaggcatgcatcactgtgcctggctaactttaaattttgtgtagagacagggtctcactatgttgcccaggctagtctca-------------------aacttctgagctcaagctatcctcctgcctcagcctcccaaaatgctgggattacaggtgtgagccactgtacctggtcCTTCAAGACTTCAAGAAATGAAATTCTGCAccaggcatggtgcctcatgcctgtaatcccagcaatttgggaggctgaggcaggtggatcacctgaggtcaggaattcgagagcaggctggccaacgtggtgaaaccccatatctactaaaaatacaaaaattagccaggtctggtggtaggcgcctgtagtcccagctactcgggaggctgaggcaggagaattgctggaacccgggaggcagaggttgcagtgagctgagatcacaccactgcactccagcctgggcaacaagagtgaaactccatctcaaaaaaa--------------------------- i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e calJac3.chr5 126534124 1674 + 159171411 M a score=11613.000000 s hg38.chr17_GL383566v1_alt 64172 12 + 90219 caaaacaaacaa s panTro4.chr17 76254334 12 + 82630442 caaaacaaacaa i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74849741 11 + 80904711 -aaaaaaaaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74659201 11 + 80997621 -aaaaaaaaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665174 11 + 74645514 -aaaaaaaaaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30716108 11 - 75148670 -aaaaaaaaaaa i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3680871 0 - 94967081 C e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67350842 37 + 73212453 I e calJac3.chr5 126534124 1674 + 159171411 M a score=5648.000000 s hg38.chr17_GL383566v1_alt 64184 7 + 90219 --aaaaaca s panTro4.chr17 76254346 7 + 82630442 --aaAAACA i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74849752 7 + 80904711 --aaaaata i rheMac3.chr16 C 0 I 1 s macFas5.chr16 74659212 7 + 80997621 --aaaaaTC i macFas5.chr16 C 0 I 1 s papAnu2.chr16 68665185 7 + 74645514 --aaaaatc i papAnu2.chr16 C 0 I 1 s chlSab2.chr16 30716119 7 - 75148670 --aaaaaTC i chlSab2.chr16 C 0 I 1 s calJac3.chr5 126535813 7 + 159171411 AGAAAGA-- i calJac3.chr5 M 1674 C 0 e nomLeu3.chr14 3680871 0 - 94967081 C e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67350842 37 + 73212453 I a score=156322.000000 s hg38.chr17_GL383566v1_alt 64191 77 + 90219 -aggccaggcgcggtggctcatgtctgtaatcccagcactttgggagaccaa----ggtgggtggatcacctgaggtcagac s panTro4.chr17 76254353 77 + 82630442 -Aggccaggcgcggtggctcatgtctgtaatctcagcactttgggagaccaa----ggtgggtggatcacctgaggtcagac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67350879 77 + 73212453 -Cagccaggcgcagtggctgacgcctgtaatcccagccctttgggaggccta----gacgggcggatcacctgaggtcagga i ponAbe2.chr17 I 37 C 0 s rheMac3.chr16 74849760 77 + 80904711 -agaccaggcacggcggctcatgtctgtaatcccagccatttgggagaccaa----ggtgggtggatcacctgaagtcaggc i rheMac3.chr16 I 1 I 4 s macFas5.chr16 74659220 81 + 80997621 -Agaccaggcacggcggctcatgtctgtaatcccagcactttgggagaccaaggtgggtgggtggatcacctgaagtcaggc i macFas5.chr16 I 1 C 0 s papAnu2.chr16 68665193 77 + 74645514 -agaccgggcacggtggctcatgtctgtaatcccagcgctttgggagaccaa----gatgggtggatcacctgaagtcaggc i papAnu2.chr16 I 1 C 0 s chlSab2.chr16 30716127 77 - 75148670 -Agactgggcacggtggctcatgtctgtaatcccagcactttgggagaccaa----ggtgggtggatcacctgaagtcaggc i chlSab2.chr16 I 1 I 4 s calJac3.chr5 126535820 68 + 159171411 AGGCctgggcacggtggctcacacctgtaatcccagcactttgggaggccga----ggtgggtggatcacct---------- i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3680871 0 - 94967081 C e canFam3.chr9 57426411 3037 - 61074082 I a score=3237.000000 s hg38.chr17_GL383566v1_alt 64268 87 + 90219 gttccaggccagcctggccaatgtggtgaatctccatctctactaaaaatacaaaaaattagccaggcatggttgtgggtgcctgta s panTro4.chr17 76254430 87 + 82630442 gttccaggccagcctggccaatgtggtgaatctccatctctactaaaaatacaaaaaattagccaggcatggtggtgggtgcctgta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67350956 85 + 73212453 gttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatac--aaaattagccgggtgtggtggcgcatgcctgta i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 74659301 4 + 80997621 -------------------------------------------------------agat---------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665270 4 + 74645514 -------------------------------------------------------agat---------------------------- i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126535888 47 + 159171411 ----------------------------------cgtctcaactaaaaatac--aaaattagccaggtgtggtgg----tgcctgta i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3680871 0 - 94967081 C e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74849837 4 + 80904711 I e chlSab2.chr16 30716204 4 - 75148670 I a score=259229.000000 s hg38.chr17_GL383566v1_alt 64355 119 + 90219 gtctcaattacttgggaggctggggcaggagaattgtttgaacctgggaggcagaggttgcagtgagccaagattgcgccattgcactccagcctgagcaacaagagcaaaactctgtc s panTro4.chr17 76254517 118 + 82630442 gtctcaattacttgggaggctggggcaggagaattgtttgaacctgggaggcagaggttgcagtgagccaagattgcgccattgcactccagcctgagcaacaagagcaaaactctgt- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67351041 119 + 73212453 atcccagctactcgggaggctaaggcaggagaatcggttgaacctgggaggcagaggttgcggtgagccaagattgcgccattgcactccagcctgggcaacaagagtgaaactccgtc i ponAbe2.chr17 C 0 I 2014 s rheMac3.chr16 74849841 119 + 80904711 gtcccagctacttgggaggctgaggcaggagaattgtttgaatctgggaggcagaggttgcagtgagccaagattgtgccattgcacttcagcctgagcaacaagagcaaaactctgtc i rheMac3.chr16 I 4 C 0 s macFas5.chr16 74659305 118 + 80997621 gtcccagctacttgggaggctgaggcaggagaattgtttgaatctgggaggcagaggttgcagtgagccaagattgtgccattgcacttcagcctgagcaacaagagcaaaactctgt- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665274 119 + 74645514 gtcccagctacttgggaggctgaggcaggagaattgtttgaatctgggaggcagaggttgcagtgagccaagattgtgccattgcactccagcctgagcaacaagagcaaaactctgtc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30716208 119 - 75148670 gtcccagctacttgggaggctgaggcaggagaattgtttgattctgggaggcagaggttgcagtaagccaagattgtgccattgcactccagcctgagcaacaagagcaaaactctgtc i chlSab2.chr16 I 4 C 0 s calJac3.chr5 126535935 109 + 159171411 atcccagctactcaacaggtggaggcaggagaa---------ccccggaggcagaggttgtggtgagccaagatcacaccactgcactccag-ctgggcaacaagagtgaaactctgtc i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3680871 0 - 94967081 C e canFam3.chr9 57426411 3037 - 61074082 I a score=581854.000000 s hg38.chr17_GL383566v1_alt 64474 389 + 90219 acacacacacacacacacacacacacacacacaaaacaaacaaac------a--aaaaagaaatgaaattctgccaagtactgcatgagcttggaagcagatctttccccagctgagccttcagatgaaaccccagcttga---gaggagacagaagacccagctaagccccgttcagaatcctggcccatagagactgtgacacagtacgtgtgtggttttaaaccatgaaatctgtggtcatttgttacacagttacagatgactaatacaGTCCCTAGGGCATCCTCACGACATGAGGGCTCAGGTGGTCTGACTCCCACTTGGTAGCTCCGGGCTCTGAATGCAAGGAGCCCAGAGAACACAGTAGCAGCTGCAGCCCCTTCTCTGACACAAGCCT s panTro4.chr17 76254635 383 + 82630442 ---------ctcTCTCACACACACACACACACAAAACAAACCAAC------A--AAAACgaaatgaaattctgccaagtactgcatgagcttggaagcagatctttccccagctgagccttcagatgaaaccccagcttgagaggaggagacagaagacccagctaagccccgttcagaatcctggcccatagagactgtgacacagtacgtgtgtggttttaaaccatgaaatctgtggtcatttgttacacagttacagatgactaatacaGTCCctagggcatcctcacgacatgagggctcaggtggcctgactcccacttggtagctccgggctctgaatgcaaggagcccagagaacacagtagcagctgcagccccttctctgacacaagcct i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74849960 367 + 80904711 acacacacacacatatacacacacacacacac---acaaaccaac------a--aaaaagaaatgaaaTTCTGCCAAGTACtgagtaggcatggaagcagatctttccccagctgagccttcagatgaaaccccagcttgagagaaggagacagaagacccggctaagccccattcagagtcctggcccacagagactgtgaggcagtatgtgtgtggttttaaaccacgaaatctgtggtcatttgttactcagt----------------------tagggcatcctcacaacgtgagggctcaggtggtctgactgccacttggtagctacaggctctgagcacaaggggcccagagaacacagtagcagctgcagccccttctctgacacaagcct i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74659423 366 + 80997621 -cacacacacacatatatacacacacacacac---acaaaccaac------a--aaaaagaaatgaaattctgccaagtactgagtaggcatggaagcagatctttccccagctgagccttcagatgaaaccccagcttgagagaaggagacagaagacccggctaagccccattcagagtcctggcccacagagactgtgaggcagtatgtgtgtggttttaaaccacgaaatctgtggtcatttgttactcagt----------------------tagggcatcctcacaacgtgagggctcaggtggtctgactgccacttggtagctccaggctctgagcacaaggggcccagagaacacagtagcagctgcagccccttctctgacacaagcct i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665393 367 + 74645514 acacacacacacacatacacacacacacacac---acaaaccaac------a--aaaaagaaatgaaattctgccaAGTACTGAGTAGGCATGGAAGCAGATCTTTCCCCAGCTGAGCCTTCAGATGAAACCCCAGCTTgagagaaggagacagaagaCGCGGCTAAGCCCCATTCAGAGTCCTGGCCCACAGAGACTGTGAGGCAGTACGTGTGTGGTTTTAAACCACGAAatctgtggtcatttgttactCAGT----------------------TAGGGCATCCTCACAACGTGAGGGCTCAGGTGGTCTGACTGCCACTTGGTAGCTCCAGGCTCTGAGCGCTAGGGGCCCAGAGAACACAGTAGCAGCTGCAGCCCCTTCTGTGATACAAGCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30716327 373 - 75148670 acacacacacacatacacacacacacacacac---acacacaaacccacaaa--aaaaagaaatgaaaTTCTGCCAAGTACtgagtaggcatggaagcagatctttccccagctgagccttcagatgaaaccccagcttgagagaaggagacagaagacccggctaagcccctttcagagtcctggcccacagagactgtgaggcagtacatgtgtggttttaaaccatggaatctgtggtcatttgttactcagt----------------------tagggcatcctcacaacgtgagggctcaggtggtctgactgccacttggtagctccaggctctgagcgcaaggggcccagagaacacagtagcagctgcagccccttctctgacacaagcct i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126536044 348 + 159171411 -----------------------------------tcaaaaCAac------aacaaaaataaatgaaattctgtcaagtactgcatgagcttggaagcagatctttccccagctgagtcttcagatgaaagcccagcttgagagatggtgacagaagacccagctaagccccgttcagaatcctggcccccagagactgtgaggcagtatgcgtgttgttctaaaccatgaaatctatggt--tttgttatgcagtgacagatgactagtacaATCCctagggcatcctctctacatgagggct--------ctgactcctacttggcagctcagggctctgaacgcaaggggctcagagaacacggcagcagctgcagcctcttatCTGGTGT-GGCCT i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3680871 0 - 94967081 C e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I a score=212502.000000 s hg38.chr17_GL383566v1_alt 64863 103 + 90219 TGGGCTCCTCCTGTGCAGGACTTCCCAACATAGCCGCTGAGTCTATCAAAGCTAGCA-AGGAAGGGAGTCTGCTGGAAAGACAAA--TGAGAATCTCTTGCAACCT s panTro4.chr17 76255018 103 + 82630442 tggGCTCCTCCTGTGCGGGACTTTCCAACATAGCCGCTGAGTCTATCAAAGCCAGCA-AGGAAGGGAGTCTGCTGGAAAGACAAA--TGAGAATCTCTTGCAACCT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 91286907 84 + 94967081 TGGGCTCCTCCTGTGCGGGCCTTCCCAACATAGCCACTCGGCCTATCAAAGCCAACA-AGGAAGTGAGTCTGCTGCCAAGAGGAA--------------------- i nomLeu3.chr14 n 0 C 0 s rheMac3.chr16 74850327 105 + 80904711 tggGCTCCTCTTGTGCAGGCCTTCCCAACATAGCCACTCAGTCTATCAAAGCCAGCA-AGGACGGGAGTCTGCTGGAAAGACAGAGATGAGAATCTCCTGCAACCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74659789 105 + 80997621 tggGCTCCTCTTGTGCAGGCCTTCCCAACATAGCCACTCAGTCTATCAAAGCCAGCA-AGGACGGGAGTCTGCTGGAAAGACAGAGATGAGAATCTCCTGCAACCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665760 105 + 74645514 TGGGCTCCTCCTGTGCAGGCCTTCCCAACATAGCCACTCAGTCTATCAAAGCCAGCA-AGGACGGGAGTCTGCTGGAAAGACAGAGATGAGAATCTCTTGCAACCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30716700 105 - 75148670 tggGCTCCTCCTGTGCAGGCCTTCTCAACATAGCCACTCAGTCTATCAAAGCCAGCA-AGGACGGGAGTCTGCTGGAAAGACAGAGATGAGAATCTCTTGCAACCT i chlSab2.chr16 C 0 I 184 s calJac3.chr5 126536392 106 + 159171411 TGGGCTCCTCCTGTGCGGGCTTTTCCAACATAGCTACTCCGTCTATCAAAGCCAGCAGGGGAAGGGAGTCTGCTGGCAAGATAGAAATGGGAATCTCTTGTAACTT i calJac3.chr5 C 0 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I a score=-1745.000000 s hg38.chr17_GL383566v1_alt 64966 7 + 90219 ------TATCGTG s panTro4.chr17 76255121 7 + 82630442 ------TATCGTG i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74850432 5 + 80904711 ------GACTG-- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74659894 5 + 80997621 ------GACTG-- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665865 5 + 74645514 ------GACTG-- i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126536498 11 + 159171411 GACCATGAGTG-- i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 91286991 0 + 94967081 C e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I e chlSab2.chr16 30716805 184 - 75148670 I a score=62541.000000 s hg38.chr17_GL383566v1_alt 64973 39 + 90219 AAAGTAACAGCCCCTCGGCATGGAGG-----TATTCTGTTGCTT s panTro4.chr17 76255128 39 + 82630442 AAAGTAACAGCCCCTCGGCATGGAGG-----TATTCTGTTGCTT i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 91286991 7 + 94967081 -------------------------------------AATGCTt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74850437 39 + 80904711 AAAGTGACAGCTCCTCGGCATGGAGG-----TATTCTGTTGCTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74659899 39 + 80997621 AAAGTGACAGCTCCTCGGCATGGAGG-----TATTCTGTTGCTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665870 39 + 74645514 AAAGTGACAGCCCCTCAGCATGGAGG-----TATTCTGTTGCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30716989 39 - 75148670 aaaGTGACAGCCCCTCGGCATGGAGG-----TATTCTGTTGCTT i chlSab2.chr16 I 184 C 0 s calJac3.chr5 126536509 44 + 159171411 AAAGTGACAGCCCCTCGGCATGGATGTATTCTATTCTGCTGCTT i calJac3.chr5 C 0 I 178 e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I a score=97743.000000 s hg38.chr17_GL383566v1_alt 65012 57 + 90219 Agaaaggagttacagaggccatgagtaccgggaggcaaggatcagcatagtcatctt s panTro4.chr17 76255167 57 + 82630442 Agaaaggagttacagaggccatgagtaccaggaggcaaggatcagcatagtcatctt i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 91286998 57 + 94967081 agaaaggagccacagaggccatgagtaccaggagacaaggatcactgcagtcatctt i nomLeu3.chr14 C 0 n 0 s rheMac3.chr16 74850476 44 + 80904711 AGGAAGGAGTTACAGAG-------------GGAGGCAAGGATCAGCACAGTCATCTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74659938 44 + 80997621 AGGAAGGAGTTACAGAG-------------GGAGGCAAGGATCAGCACAGTCATCTC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665909 44 + 74645514 AGGAAGGAGTTACAGAG-------------GGAGGCAAGGATCAGCACAGTCATCTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30717028 44 - 75148670 AGGAAGGAGTTACAGAG-------------GGAGGCAAGGATCAGCACAGTCATCTC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126536731 57 + 159171411 Agaaaggagctacaaaggccatgagtaccaggaggcaaggatcagtgcagtcatctt i calJac3.chr5 I 178 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I a score=1382023.000000 s hg38.chr17_GL383566v1_alt 65069 582 + 90219 agaagcaacttaccGTGGGGAAGCCCCCAAGTAGGTGCCCTGGTCGA-----------------------CAGCCCTGGTGCCAGCAGTATGAGCCCGATGAGCCTTCAGCTGGTCCCCAGACCAGACCCTCCATTCTTGGCAGGCACTTCTGCCT-CCTCTGTCAGTTACAGTTGGACAGTTcctccctgtgggaggagtttcaaggtcacatggtggagaagcgggtggaatgggagatcttgctgtggctgttctgaaaaacctgctctgccacGgcccatcttcaggccacaactcacatccctcccacgtgcgaagtccacttgccccatcccaagacttctgaagtc-----------tcatccactttagttttgggctcagactggaggtccaggatccagctgtgtaaaccaaggcctggtgaggaggagactcctgggcgtg---------------------------------------------------ggggctcttcaagCCC-------GGGGGTGTTTTctccgtgcccgtggctccttcctgagttattcttcccttttcttaaaaaa-ctgagtttgcaactgagtagccctctcagcccatttccttcctttaaaagttgaggctctaaaagcctct----ttcattttgtcctgtctt s panTro4.chr17 76255224 582 + 82630442 agaagcaacttaccGTGGGGAAGCCCCCAAGTAGGTGCCCTGGTCGA-----------------------CAGCCCTGGTGCCAGCAGTATGAGCCCGATGAGCCTTCAGCTGGTCCCCAGACCAGACCCTCCATTCTTGGCAGGCACTTCTGCCT-CCTCTGTCAGTTACAGTTGGACAGTTcctccccgtgggaggagtttcaaggtcacatggtggagaagcgggtggaacgggagatcttgctgtggctgttctgaaaaacctgctctgccacGgcccatcttcaggccacagctcacatccctcccacgtgcgaagtccacttgccccatcccaagacttctgaagtc-----------tcatccactttggttttgggctcagactggaggtccacgatccagctgtgtaaaccaaggcctggtgcagaggagactcctgggCGTG---------------------------------------------------GGGGGCCTTCAAGCCC-------GGGGGTGTTTTctccgtgcccgtggctccttcctgagttattcttcccttttcttaaaaaa-ctgagtttgcaactgagtagccctctcagcccatttccttcctttaaaagttgaggctctaaaagcctct----ttcattttgtcctgtctt i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3680871 620 - 94967081 agaaGCAACCTACcgtggggaag-ccccaagtaggtgccctggtcgacagtcctgatctttgaatcttaccagccctggcaccggcagtatgagcccgatgagccttcagctggtcccCAGACCAGACCCTCCATCCTTGGCAGGCACTTCTGCCT-CCTCTGTCAGTTACAGTTGGACAGTTcctccccgtgggaggagcttcaaggtcacatggtggagaagcgggtgaaatgggagatcttgctgtggctgttctgaaaaacttgctctgccacGgcccatcctcaggccacaactcacatccctcccacgtgcaaagtccacttgccccaccccaagactcctgaagcctttggttttggttttccactttggtcttgggctcggactggaggtccaggatccagctgtgtaaaccaaggcctggtgcggaggagactcctgggCGTG---------------------------------------------------GGGGGTCTTCAAGCCC-------CGGGGTGTTTTctccgtgcctgtggttccttcctgagttattcttcccttttcttaaaaaagttgagtttgcaactaagtagccctctcagcccatttccttcctttaaaagttgaggctctaaaagcctctttcattcattttgtcctgtctt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74850520 653 + 80904711 AGAAGCAACctaccatggggaag-ccccaagtaggcgccctggtcaacagtcttgatctttgagtcttaccagccctggtgccagcagtatgagcctgatgggacttcggctggtccccagaccagaccctccatcCTTGGCAGGCACTTCTGCCT-CTTATGTCAGTTACAGTTGGACAGTTcctccccctgggaggagtttcaaggtcacatggtggagaagcgggtggaatgggagatcttgctgtggctgttctgaaaaacctgcactgccacGgcccatcctcaggccacagctcacatccctcccacatgtgaagtccacctgccccatcccaagactcctgaagcc-----------tcatccactgtggttttgggcttggactggaggcccaggatccagctgtgtaaaccatggcctggtacggaggagactcctGGACGTGAGGGGTCTTCAAGCCTAAACCAAGGCCTGGTGTGGAGGAGACTCCTGGGTAGGGGGTCTTCAAGCCC-------GGGGGTg--ttctccgtgcctatggctccttcctgagttattcttcccttttcttaaaaaa-ctgagtttgcaactgagtagccctctcagcccattttcttcctttaaaagttgaggctctaaaagcctct----ttcgttttaccctgtctt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74659982 653 + 80997621 AGAAGCAACCTACcatggggaag-ccccaagtaggcgccctggtcaacagtcttgatctttgagtcttaccagccctggtgccagcagtatgagCCTGATGGGACTTCGGCTGGTCCCCAGACCAGACCCTCCATCCTTGGCAGGCACTTCTGCCT-CTTCTGTCAGTTACAGTTGGACAGTTcctccccctgggaggagtttcaaggtcacatggtggagaagcgggtggaatgggagatcttgctgtggctgttctgaaaaacctgcactgccacGgcccatcctcaggccacagctcacatccctcccacgtgtgaagtccacctgccccatcccaagactcctgaagcc-----------tcatccactgtggttttgggcttggactggaggcccaggatccagctgtgtaaaccatggcctggtacggaggagactcctGGACGTGAGGGGTCTTCAAGCCTAAACCAAGGCCTGGTGCGGAGGAGACTCCTGGGTAGGGGGTCTTCAAGCCC-------GGGGGTG--TTctccgtgcctatggctccttcctgagttattcttcccttttcttaaaaaa-ctgagtttgcaactgagtagccctctcagcccattttcttcctttaaaagttgaggctctaaaagcctct----ttcgttttaccctgtctt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68665953 653 + 74645514 AGAAGCAATCTACCATGGGGAAG-CCCCAAGTAGGCGCCCTGGTCAACAGTCCTGATCTTTGAGTCTTACCAGCCCTGGTGCCAGCAGTATGAGCCTGATGGGACTTCAGCTGGTCCCCAGACCAGACCCTCCATCCTTGGCAGGCACTTCTGCCT-CTTCTGTCAGTTACAGTTGGACAGTTCCTCCCCCTGGGAGGAGTTTCAAGGTCACATGGTGGAGAAGCGGGTGGAATGGGAGATCTTGCTGTGGCTGTTCTGAAAAACCTGCACTGCCACGGCCCATCCTCAGGCCACAGCTCACATCCCTCCCACGTGTGAAGTCCACCTGCCCCATCCCAAGACTCCTGAAGCC-----------TCATCCACTGTCGTTTTGGGCTTGGACTGGAGGCCCAGGATCCAGCTGTGTAAACCATGGCCTGGTACGGAGGAGACTCCTGGACGTGAGGGGTCTTCAAGCCTAAACCAAGGTCTGGTGCGGAGGAGGCTCCTGGGTGGGGGGTCTTCAAGCCC-------AGGGGTG--TTCTCCGTGCCTATGGCTCCTTCCTGAgttattcttcccttttcttaaAAAA-CTGAGTTTGCAACTGAGTAGCCCTCTCAgcccatttctttcctttaaaagttGAGGCTCTAAAAGCCTCT----TTCGTTTTACCCTGTCTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30717072 653 - 75148670 AGAAGCAACCTACCATGGGGAAG-CCCCAAGTAGGCACCCTGGTCAACAGTCCTGATCTTTGAGTCTTACCAGCCCTGGTGCCAGCAGTATGAGCCTGATGGGACTTCAGCTGGTCCCCAGACCAGACCCTCCATCCTTGGCAGGCACTTCTGCCT-CTTCTGTCAGTTACAGTTGGACAGTTcctccccctgggaggagtttcaaggtcacatggtggagaagcgggtggaatgggagatcttgctgtggctgttctgaaaaacctgcactgccacGgcccatcctcaggccacagctcacatccctcccacgtgtgaagtccacctgccccatcccaagactcctgaagcc-----------tcatccactgtggttttgggcttggactggaggcccaggatccagctgtgtaaaccatggcctggtatggaggagactcctGGACGTGAGGAGTTTTCAAGCCTAAACCAAGGCCTGGTGCGGAGGAGACTCCTGGGTAGGGGGTCTTCAAGCCT-------GGGGGTg--ttctccgtgcctatggctccttcctgagttattcttcacttttcttaaaaaa-ctgagtttgcaactgagtagccctctcagcccatttccttcctttaaaagttgaggctctaaaagcctct----ttcgttttaccctgtctt i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126536788 609 + 159171411 agaagcaacccaccaTGGGGAAG-TCCCAGGTTGGCACCCTGGTCGGCAGTCCTGATCTTCAAG-CTTCCCAGCTCTGGTGCTGGCAGTGTGAGCCCAATGAGCCTTCAGCTGGTCCCCAGACCAGACCCTCCATCCTTGGAAGGCACTTCTGCCTCCTTCTGTGAGTTACAATTGGGCAGTTcctctctgtgggaaaagtttcaaggtcacattgtggagaagcaggtggaatgggacatcttgctgtggctgttttggaaaatctgctctgccacagcccatcctcaggccacaactcacatccctcccacctgtgaagtccgcttgccccatcccaagactcctgaaacc-----------tcacccactgtggttttgggctcagactggaggtccaggatccagctgtataaaccagggcctggtgcggaggggactcctgggtgcg---------------------------------------------------gAGGGTCTTCAAGCCCTATGCCTGTGTGTg--ttctccgggcctctggctccttcctgattcactcttcccttttcttaaaaaa-ctgagtttgcaactgagtaggcctctcagcctatttccttcctctaaaagttgacgctctaaaatcctct----tccattttgTCCtctttt i calJac3.chr5 C 0 I 3591 e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I a score=233284.000000 s hg38.chr17_GL383566v1_alt 65651 150 + 90219 catcccatttagtgcaagaaattaattcctttaaaaacttggct------gggcgccgtggctcacgcctgtaatcctcgcactttgggagactgaggcgggtggatcacctgaggtcaggagttccagaccagcctggccaacatggtgaaatcc s panTro4.chr17 76255806 150 + 82630442 catcccatttagtgcaagaaattaattcctttaaaaacttggct------gggcgccgtggctcacgcctgtaatccccgcactttgggagaccgaggcgggtggatcacctgaggtcaggagttccagaccagcctggccaacatggtgaaatcc i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3681491 142 - 94967081 catcccatttagtgcaagaaattaattcctttaaaaacttGGCTGCggccgggcgcggtggctcacgcctctaatcccagccctttgggaggccgaggcgggcggatcac--gaggtcaggagatcaagac------------cacggtgaaaccc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74851173 149 + 80904711 tatctca-ttagtgcaagaacctaattcctttaaaaacttggct------gggtgcggtggctcacgcctgtaatccccacactttgggaggccgaggcgagaggatcacttgaggctgggagttccagaccagcctggccaacatggcaaaaccc i rheMac3.chr16 C 0 I 20 s macFas5.chr16 74660635 149 + 80997621 tatctca-ttagtgcaagaacctaattcctttaaaaacttggct------gggtgcggtggctcacgcctgtaatccccacactttgggaggccgaggcgagaggatcacttgaggctgggagttccagaccagcctggccaacatggcaaaaccc i macFas5.chr16 C 0 I 16 s papAnu2.chr16 68666606 148 + 74645514 CATCCCA-TTAGTGCAAGAACctaattcctttaaaaacttggct------gggtgcagtggctcacgcctgtaatccccgcactttgggaggccgaggctagaggatcacttgaggctgggagttccagaccagcctggccagcatggcgaaacc- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30717725 149 - 75148670 catccca-ttagtgcaagaacctaattcctttaaaaacttggct------gggtgcagtggctcacacctgtaatccccgcactttgggaggccgaggcgagaggatcacttgaggctgggagttccagactagcctggccagcatggcgaaaccc i chlSab2.chr16 C 0 I 20 e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I a score=1162.000000 s hg38.chr17_GL383566v1_alt 65801 4 + 90219 tgtc s panTro4.chr17 76255956 4 + 82630442 tgtc i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3681633 4 - 94967081 cgtc i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74660800 3 + 80997621 -aac i macFas5.chr16 I 16 I 1 s papAnu2.chr16 68666754 4 + 74645514 tgAC i papAnu2.chr16 C 0 I 17 e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74851322 20 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30717874 20 - 75148670 I a score=1758302.000000 s hg38.chr17_GL383566v1_alt 65805 1074 + 90219 tctactaaaaatac-------aaaaattagctgggcatggtggtgggtgcctgtaat-ccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggcagaggtcacagtgagctgagatcacgccactgaactccagcctgggtgacagagtgaggatctgtctcaaaaacaaaacaa-------------------------aacaaaaaac----------------------------------ccaacttgggaacttcctatgtactaatctaaaattcattccggccaggcgcagtggctcacacctgtaatcccagcactttgcgaggcctagacaggcggatcacctgaggtcaggagttcgagaccagtctgaccaacatggagaaaccccgtctctaccaaaaacacaaaatta---------------------gccgggtgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcagttgaacctgggaggc---ggaggttgcggtgagccgagattgcaccattgcaccacagcctgggcaacaagagcgaaattctgtctc-aaaaaacaaaata---aaataaaaataaaattcattccattagac-aaaaAACCTCCCTCAAAAAACtt-----aaaaaaaagaatagatgttttcttttggagcagctgtacgttaacaaaaaagttacctggagagtacagagaattcccgaaaacttcctctccccgctca-cccccccgaaactttcctgctcattaacatcttgcattaatgtggtgcatttgttacaatcgatgagccaatatgaatacattattattagctaagatccactgtttacagtcagttttactctgcgttttacacgacatgggtcttgcccaatgaataatgtcaggcatccaccattacagcatcatatagaatagtttcactgccccacaaatcccttgcacaccatccattccttcctccttccct-cgcaccagctcctgattactgttttcatagctttgctgtttccagaatatggtctggttggaatcatgcagtaggctgcagccttttcacgttggcttctttcccttagcactacaacgctttctgagataagctcttctccaccc s panTro4.chr17 76255960 1075 + 82630442 tctactaaaaatac-------aaaaattagctgggcatggtggtgggtgcctgtaat-ccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggcagaggtcacagtgagctgagatcacgccactgaactccagcctgggtgacagagtgaggatctgtctcaaaaacaaaacaa-------------------------aacaaaaaac----------------------------------ccaacttgggaacttcctatgtactaatctaaaattcattccagccaggcgcagtggctcacgcctgtaatcccagcactttgcgaggcctagacaggcggatcacctgaggtcagcagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaacacaaaatta---------------------gccgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcggttgaacctgggaggc---agaggttgcggtgagccgagattgcaccattgcaccacagcctgggcaacaagagcgaaactctgtctc-aaaaaacaaaata---aaataaaaataaaattcattccattagac-aaaaaacctccctcacaaAACtt-----aaaaaaaagaatagatgttttcttttggagcagctgtacgttaacaaaaaagttacctggagagtacagagaattcccgaaaacttcctctccctgcgcaccccccccgaaactttcctgctcattaacatcttgcattaatgtggtgcatttgttacaatcgatgagccaatatgaatacattattattagctaagatccactgtttacagtcggttttactctgcgttttacacgacatgggtcttgcccaatgaataatgtcaggcatccaccattacagcatcatatagaatagtttcactgccccacaaatcccttgcacaccatccattccttcctccttccct-cgcaccagcccctgattactgttttcatagctttgccgtttccagaatatggtctggttggaatcatgcagtaggctgcagccttttcactttggcttctttcccttagcactacaacgctttctgagataagctcttctccaccc i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3681637 1033 - 94967081 tctactaaaaataca------aaaaattagccaggtgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaa-------------------------aaaaa-----------------------------------------aaCTTg-----------------------------------gctgggcgccgtggctcacgcctgtaatcccagcactttgggaggcctagacgggcggatcacccgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaagacacaaaatta---------------------gccaggtgtggtggcgcatgcctgtaatcccacctactcgggagactgaggcaagagaatcggttgaacctgggaggc---agaggttgcggtgagccgagattgtgccattgcactccagcctgggcaacaagagcaaaactctgtctc-aaaaaacaaaataaataaataaaaataaaaTTCATTCCATTAGACAAAAAAACCTCCCTCACGAAACtt-----aaaagaaagaatagatgttttcttttggagcagctgtacattaac-aaaacgttacctggagagtacagagaattctcgaaaacttcctctccccacgcacccacccccaaattttcctgctcattaacatcttgcattaatgtggtacatttgttacaatcgatgagctaatatgaatacattattattagctaagattcactgtttatagtcggttttactctgcgttctacacgacatgggtcttgcccaatgaagaatgtcaggcatccaccattacagcatcatatagaatagtttcactgccccacaaatcccttgcacaccgtccattccttcctccttccct-cgcaccagccc--gattactgttttcatagctttgccgtttccagaatatggtctggttggaatcatacagta---tgcagccttttcacgttggcttctttcccttagcaCCACAACAGTttctgagataagctcttctccaccc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74851342 1158 + 80904711 tctactaaaaatacaaaatccaaaaattagatgggtgtggtggccggcgcctgtaatcccagctactcaggaggttgaggcaggagaatcacttgaacctgggaggcggaggtcgcagtgagctgagatcacaccactgaactccagcctgggcgacagagtaagaatctgtctcaaaaacaaaacaa----------aacataacaaaacaaaacaaaaAACCCAGTTTGGGAGCTTCCAGTGTACTAATGTAAAACCAGTTTGGGAGCTTCCAGTGTACTAATCTAAAAGTCATTCCAgctgggcgtggtggctcacacctgtaatcccaacactttgggagaccgaggtgggcggatcacctgaggtcaggaggtcgagaccagcctgaccaacatggagaaaccctgtctctactgaaaatacaaaattatgggtgtatttttaggcttggactgggtgtggtggcgcttgcctgtaatcccagctactcgggaggctgagacaggagaatcacttgaacctgggagga---ggaggttgaggtcagtggagatggcaccaatgtgctccagcctgggcaataggagtgaaactccgtctc-aaaaatcaaaatatataaataaaaataaaaTTCATTCCATTAGAC-AAAAAACCTCTCTCACAAAACTT-AAAAAaaaaaaggaatagatgttttcttttgaagcagttttatgttaacaaaaaagttacctggcgagtacagagaattcttgaaaacttcctctccctgctccaactcccccaaattttcctgctgactaacatcttgcattaatgtggcacatttgttacaatcaatgagccaatatgaatacattatcgttagctaagatccactgttaacagtcggttttactctgcgttttacacgagatgggtcttgcccagtgaataatgtcaggcatccaccattacagcatcatatagaataatttcactgccccacaaatcccttgcacgccatccattccttcctccttccctccgcaccagcccctgattactgttttcagagctttgctgtttccagaatatggtatggttggaatcatacagtt---tgcagccttttcacggtggcttctttcccttagcaccacaacactttctgagacaagcccttctccaccc i rheMac3.chr16 I 20 I 3 s macFas5.chr16 74660804 1125 + 80997621 tctactaaaaatacaaaatccaaaaattagatgggcgtggtggccggcgcctgtaatcccagctactcaggaggttgaggcaggagaatcacttgaacctgggaggcggaggtcgcagtgagctgagatcacaccactgaactccagcctgggcgacagagtaagaatctgtctcaaaaacaaaacaa----------aacataacaaaacaaaacaaaaAAc----------------------------------ccagtttgggagcttccagtgtactaatctaaaagtcattccagccgggcgcggtggctcacacctgtaatcccaacgctttgggagaccgaggtgggcggatcacctgaggtcaggaggtcgagaccagcctgaccaacatggagaaaccctgtctctactgaaaatacaaaattatgggtgtatttttaggcttggactgggtgtggtggtgcttgcctgtaattccagttactcgggaggctgagacaggagaatcacttgaacctgggagga---ggaggttgaggtcagtggagatggcaccaatgtgctccagcctgggcaataggagtgaaactccgtctc-aaaaatcaaaatatataaataaaaataaaattcattccattagac-aaaaaacctctctcacaaaactTAAAAAAaaaaaaggaatagatgttttcttttgaagcagttttatgttaacaaaaaagttacctggcgagtacagagaattcttgaaaacttcctctccctgctccaactcccccaaattttcctgctgactaacatcttgcattaatgtggtacatttgttacaatcaatgagccaatatgaatacattatcgttagctaagatccactgttaacagtcggttttactctgcgttttacatgagatgggtcttgcccagtgaataatgtcaggcatccaccattacagcatcatatagaataatttcactgccccacaaatcccttgcacgccatccattccttcctccttccctccgcaccagcccctgattactgttttcagagctttgctgtttccagaatatggtatggttggaatcatacagtt---tgcagccttttcacggtggcttctttcccttagcaccacaacactttctgagacaagcccttctccaccc i macFas5.chr16 I 1 C 0 s papAnu2.chr16 68666775 1099 + 74645514 tctactaaaaatacaaaatacaaaaattagctgggtgtggtggccggcgcctgtaatcccagctactcaggaggttgaggcgggagaatcacttgaacctgggaggcggacgtcacagtgagctgagatcacaccactgaactccagcctgggcgacagagtaagaatctgtctcaaaaacaaaataa---------------aacaaaacaaaacaaaacac----------------------------------ccaattTGGGAGCTTCCTGGGTACTAATCTAAAATTCATTccagcctggcgcggtggctcacacctataatcccaacactttgggagaccaaggtgggcggatcacctgaggtcaggaggtcaagaccagcctggccaacatggagaaaccctgtctctactaaaaatacaaaatta---------------------gctgggtgtggtggcgcatgcctgtagtcccaactactcaggaggctgagacaggagaatcacttgaacctgggaggc----gaggttgAGGTCAGTGgagatgacaccattgcactccagcctgggcaataggagtgaaactccgtctcaaaaaaacaaaatatataaataaaaataaaattcattccattagac-aaaaaacctccctcacaaaacttaaaaaaaaaaaaggaatagatgtTTTCTTTTGAAGCAGTTTTATGTTAACAAAAAAGTTACCTGGAGAGTACAGAGAATTTCTGAAAACTTCCTCTCCCTGCTCCAACTCCCCCAAATTTTCCTGCTGACTAACATCTTGCATtaatgtggtacatttgttacaatcaatgagCCAATATGAATACATTACCATTAGCTAAGATCCACTGTTTACAGTCAGTTTTACTCTGCGTTTTACACGAGATGGGTCTTGCCCAGTGAATAATGTCAGGCATCCACCATTACAGCATCATATAGAATAATTTCACTGCCCCACAAATCCCTTGCACGCCAtccattccttcctccttccctccgcACCAGCCCCTGATTACTGTTTTCAGAGCTTTGCCGTTTCCAGAATGTGGTatggttggaatcatacagta---tgcagccttttcacgctggcttctttcccttagcacCACAACACTTTCTGAGATAGGCCCTTCTCCACCT i papAnu2.chr16 I 17 C 0 s chlSab2.chr16 30717894 1103 - 75148670 tctactaaaaatacaaaatacaaaaattagctgggtgtggtggcgggcgcctgtaatcccagctactcaggaggttgaggcaggagaatcacttgaacctgggaggcagaggccacagtgagctgagatcacaccactgaactccagtctgggcgacagagtaagaatctgtctcaaaaacaaaacaaaacaaaacataacaaaacaaaacaaaaccaaaaAc----------------------------------ccaatttgggagcttcctgtgtactaatctaaaattcattccagctgggtgccatcgctcagacctataatcctaacactttgggagaccgaggtgggcggatcacctgaggtcaggaggtcgataccagcctgaccaacatggagaaaccgtgtctctactaaaaatacaaaatta---------------------gctgggtgtggtggcgcatgcctgtagtcccaactactcaggaggctgagacaggagaatcacttgaacctgggaggaggaggaggttgaggtcagtggagatggcaccattgcgctccagcctgggcaataggagtgaaactccgtctcaaaaaaacaaaatatataaataaaaataaaattcattccattagac--aaaaacctccctcacaaAACTT--AAAAaaaaaaagaatagatgttttcttttgaagcagttttatgttaacaaaaaagttacctggagagtacagagaattcctgaaaacttcctctccctgctccaactcccccaaattttcctgctgactaacatcttgcattaatgtggtacatttgttacaatcaatgagccaatatgaatacattaccattagctaagatccactgtttacagtcggttttactctgcgttttacacgagatgggtcttgtccagtgaatgatgtcaggcatccaccattacagcatcatatagaataatttcactgccccacaaatcccttgcacgccatccattccttcctccttccccccgcaccagcccctgattattgttttcagagctttgccgtttccagaatacca-atggctggaatcatatagta---tgcagccttttcacggtggcttctttcccttagcaccacaacactttctgagataagcc----------- i chlSab2.chr16 I 20 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I a score=2277.000000 s hg38.chr17_GL383566v1_alt 66879 5 + 90219 cacct s panTro4.chr17 76257035 5 + 82630442 cacct i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3682670 5 - 94967081 cccct i nomLeu3.chr14 C 0 C 0 s chlSab2.chr16 30718997 5 - 75148670 cacct i chlSab2.chr16 C 0 I 3 e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74852500 3 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e papAnu2.chr16 68667874 0 + 74645514 C e macFas5.chr16 74661929 0 + 80997621 C a score=3876.000000 s hg38.chr17_GL383566v1_alt 66884 40 + 90219 cccaaagtgcggggattacaggcgtgagccaccgcgccca s panTro4.chr17 76257040 40 + 82630442 cccaaagtgcggggattacaggcgtgagccaccgcgccca i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3682675 40 - 94967081 cccaaagtgtggggattacaggcgtgagccaccgcgccca i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74661929 3 + 80997621 ---------tgg---------------------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68667874 3 + 74645514 ---------TGG---------------------------- i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74852500 3 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719002 3 - 75148670 I a score=1432882.000000 s hg38.chr17_GL383566v1_alt 66924 828 + 90219 gctTCAAGTgagaaaagacccttgtgatttgagaagacctgctcttcaacagagaaactccgcaaggaatgccgctaaggtcctcagaatgcctttgtctgtccgaaagggtttatggggcacttttcc----tttttttccctgaggtcttcataaaggatcttacagtcccctctggacttctttgtcctgaggccctttctcactttgagaatcatttgctggctgaaaagcctgttccggtctttacatttcctcccagcttcactggaaaatgaaatcgtttgctcctagttcccctctctccttttccattttattataggcagaaggagccaggagcaccttcaacgacctgcctggaaaactcatcagctacagcaacaagtcagctaggtatgctcggtgtctactttctatgctatggcaggcaacagtt---ttattaaaccttctgcaaccacatgagaaagggttcctttcctccaatagccagtagcattttcttttttctttttc--------tttttcttttt--tttttttttgagatgcagtctcgctctgtcacccaggctggagtgcagtggcatgatcttggctcattgcagcctccatctcgcaggttgaagcaattctctgcctcagcctcccgagtagctgggattacaggtgccagccaccacatctagctaatgttttaatttttattagagacagggtttcatcatgttggccaggctggtctcgaactcctgagctcaagcaatccacccgcctcagcctcccaaagtgctaggattacaggcttgagccaccgcgcccagcTTGCGTTtttctttt s panTro4.chr17 76257080 775 + 82630442 gctTCAAgtgagaaaagacccttgtgatttgagaagacctgctcttcgacagagaaactccgcaaggaatgccgctaaggtcctcagaatgcctttgtc---ccg-----------------------------------------------cataaaggatcttacagtcccctctggacttctttgtcctgaggccctttctcactttgagaatcatttgctggctgaaaagcctgttccggcctttacatttcctcccagcttcactggaaaatgaaatcgtttgctcctagttcccctctctccttttccattttattataggcagaaggagccaggagcaccttcaacgacctgcctggaaaactcatcagctacagcaacaagtcagctaggtatgctcggtgtctactttctatgctatggcaggcaacagtt---ttattaaaccttctgcaaccacatgagaaagggttcctttcctccaatagccagtagcattttcttttttctttttc---------------tttc--tttttttttgagatgcagtctcgctctgtcgcccaggctggagtgcagtggcatgatcttggctcattgcagcctccatctcgcgggttgaagcaattctctgcctcagcctcccgagtagctgggattacaggtgccagccaccacatctagctaatgttttaatttttagtagagacagggtttcatcatgttggccaggctggtctcgaactcctgagctcaagcaatccacccgcctcagcctcccaaagtgctaggattacaggcttgagccaccgcgcccagcttgcatttttctttt i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3682715 840 - 94967081 gcTTCAAGTgagaaaagccccttgtgatttgagaagacctgctcttcaacagagaaactccgcaaggaatgccactaaggtcctcagaatgcctttgcctgtccgaaagggtttatgaggcactttccctttttttttttccctgaggtcttcataaaggatcttacggtcccctctggacttctttgtcctgaggccctttctcactttgagaatcatttgctggctgaaaagcctgttccggcctttacatttcctcccagcttcactggaaaatgaaatcgtttgctcctagttcctctctctccttttccattttattacaggcagaaggagccaggagcaccttcaatgacctgcctggaaaactcatcagctacagcaacaagtcagctaggtatactcggtgtctactttctatgctatggcaggcaacagtt---ttattaaaccttctgcaaccacatgagaaagggttcctttcctccaacagccagtagcattttcttttttctttttcttttctttttttctttttt--ttttttttttagatgcagtctcgctctgtcgcccaggctggagtgcagtggcatgatcttggctcattgcagcctccatctcgcagattgaagccattctctgcctcagcctcccgagtagctgagattacaggtgccagcaaccacatctagctaatgtcttaatttttagtagagacagggtttcatcacgttggccaggctggtctggaactcctgagctcaagcaatgcacccgcctcagcctcccaaagtgctaggattacaggcttgagccactgcgcccagcTTGCAtttttccttt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74852503 822 + 80904711 gctttaagtgagaaaagaaccttgtgatttgagaagacctgctcttcaacagagcaactctgcaaggaatgccgctaaggtcctcaggatgcctt----tgtctgaaagggtttgtgaggcacttttcc----tttttttccctgaggtcttaacaaaggatcttacagttccctctggactgctttgtcctgaggccctttctcactttgagaatcatttactggctgaaaactctgttctggcctttacgtttcctcccagcttcactggaaaatgaaattgtttgctcctagttcctctctctccttttccattttattataggcagaaggagccaggagcaccttcaa-gacttgcctggaaaactcatcagctacagcaacaagccagctaggtgtactcggtgtctactttctatgctatggcaggcaacagtt---ttattaaaccttctgccaccacatgagaaagggttcctttgctccaatagccaatagcattttcttttttctttttc---------tttctttttc--tttttttttgagatggagtctcgctctgttgcccaggctggagtgcagtggcgtgatcttggctcactgcagcctccgtcgcgcagggtgaagcaattctctgcctcagcctcctgagtagctgagattacaggtgccagccaccacatctggctaatttttttatttttagtagagacagggtttcatcacgttggctgggctggtctcgaactcctgagttcaagcaatccacccatctcagcttcccaaagtgctgggatcacaggcttgggctactgcgcctggcttgcatttttctttT i rheMac3.chr16 I 3 I 751 s macFas5.chr16 74661932 824 + 80997621 gctttaagtgagaaaagaaccttgtgatttgagaagacctgctcttcaacagagcaactctgcaaggaatgccgctacggtcctcaggatgcctt----tgtctgaaagggtttctgaggcacttttcc----tttttttccctgaggtcttaataaaggatcttacagttccctctggactgctttgtcctgaggccctttctcactttgagaatcatttactggctgaaaactctgttccggcctttacgtttcctcccagcttcactggaaaatgaaattgtttgctcctagttcctctctctccttttccattttattataggcagaaggagccaggagcaccttcaa-gacttgcctggaaaactcatcagctacagcaacaagccagctaggtgtactcggtgtctactttctatgctatggcaggcaacagtt---ttattaaaccttctgccaccacatgagaaagggttcctttgctccaatagccaatagcattttcttttttctttttc---------tttctttttctttttttttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcgtgatcttggctcactgcagcctccgtcgcgcagggtgaagcaattctctgcctcagcctcctgagtagctgagattacaggtgccagccaccacatctggctaatttttttatttttagtagagacagggtttcatcacgttggctgggctggtctcgaactcctgagttcaagcaatccacccatctcagcttcccaaagtgctgggatcacaggcttgggctactgcgcctggcTTGCATTTTTCTTtt i macFas5.chr16 C 0 I 8 s papAnu2.chr16 68667877 797 + 74645514 GCTTCAAGTGAGAAAAGAACCTTGTGATTTGAGAAGACCTGCTCTTCAACAGAGCAACTCTGCAAGGAATGCCGCTAAGGTCCTCAGGATGCCTT----TGTCTGAAAGGGTTTGTGAggcacttttcc----tttttttccctgagGTCTTAATAAAGGAT------------------CTGCTTTGTCCTGAGGCCCTTTCTCACTTTGAGAATCACTTACTGGCTGAAAACCCTGTTCCGGCCTTTACGTTTCCTCCCAGCTTCACTGGAAAATGAAATTGTTTGCTCCTagttcctctctctccttttccattttattatagGCAGAAGGAGCCAGGAGCAccttcaa-gacctgcctggaaAACTCATCAGCTACAGCAACAAGCCAGCTAGGTGTACTCGGTGTCTACTTTCTATGCTATGGCAGGCAACAGTT---TTATTAAACCTTCTGCCACCACATGAGAAAGGGTTCCTTTGCTCCAATAGccaatagcattttcttttttctttttc---------tttctttttc-ttttttttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcgtgatcttggctcactgcagcctccgtctcgcAGGGtgaagcaattctctgcctcagcctcctgagtagctgagattacaggtg--------cacatctggctaatttttttatttttagtagagacagggtttcatcacgttggccgggctggtttcgaactcctgagttcaagcaatccacccatctcagcttcccaaagtgctgggatcacaggcttgggctactgtgcctggcttgcatttttctttt i papAnu2.chr16 C 0 I 8 s chlSab2.chr16 30719005 829 - 75148670 gcttcaagtgagaaaagaaccttgtgatttgagaagacctgctcttcaacagagcaactccacaaggaatgccgctaaggtcctcaggatgcctttgtctgtctgaaagggtttgtgaggcacatttcc----tttttttccctgaggtcttaataaaggatcttacagtcccctctggactgctttgtcctgaggccctttctcactttgagaatcacttactggctgaaaaccctgttccggcctttacgtttcctcccagcttcactggaaaatgaaattgtttgctcctagttcccctctctccttttccattttattataggcagaaggagccaggagcaccttcaa-gacctgcctggaaaactcatcagctacagcaacaagccagctaggtgtactcggtgtctactttctatgctatggcaggcaacagttttattattaaaccttctgccaccacatgagaaagggttcctttgctccaatagccaatagcattttcttttttctttttc---------tttctttttc--tttttttttgagatggagtctcgctctgtcgcccgggctggagtgcagtggcgtgatcttggctcactgcagcctccgtctcgcagggtgaagcaattctctgcctcagcctcctgagtagctgagattacaggtgccagccaccacatctggctaatttttttatttttagtagagacagggtttcatcacgttggccgggctggtctcgaactcctgagttcaagcaatccacccatctcagcttcccaaagtgctgggatcacaggcttgggctactgcgcctggcTTGCATTTttctttt i chlSab2.chr16 I 3 I 792 e canFam3.chr9 57426411 3037 - 61074082 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I a score=26373.000000 s hg38.chr17_GL383566v1_alt 67752 94 + 90219 --------ttctttcctt--ccttccttctttctttcctt----------ccttccttcttccttcctt--cctttctttttttctctctctctccttctcttc-----ttctttctcttt--- s panTro4.chr17 76257855 62 + 82630442 --------ttctttc-------------------------------------------cttccttcctt--cctttctttttttttctctctct-ctcctcttc-----ttctttctcttt--- i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3683555 94 - 94967081 --------ttttttt-------tcccttccttctttcctt----------ccttttttttttttttttt--tttttttttttttttttttttttttttttttttgggggtttttttttttt--- i nomLeu3.chr14 C 0 M 9512 s macFas5.chr16 74662764 112 + 80997621 tccttccgttccttcctttccttcccttccttccctcctttgcctccctcccttccttccttccttctc--tctctctttttctttctttcttttct----ttc-----tttttctttctttc- i macFas5.chr16 I 8 C 0 s papAnu2.chr16 68668682 119 + 74645514 tccttcccttccttcctttccttcccttccttccctcctttccctccctccctcccttccttccttctctttctttctttttctttctttcttttcttttcttc-----ttttcttttctttct i papAnu2.chr16 I 8 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I a score=15726.000000 s hg38.chr17_GL383566v1_alt 67846 49 + 90219 ctttctctctttccttttttattttattttctttattttcttttttttt s panTro4.chr17 76257917 42 + 82630442 ctttctctctttcctttttttctttcttttctt-------ttttttttt i panTro4.chr17 C 0 C 0 s macFas5.chr16 74662876 48 + 80997621 ctttctttccttccttccttctttctttttctt-cttttctttttcttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68668801 48 + 74645514 ttttctttctttctttctttcttttctttcttt-cttttctttttcttt i papAnu2.chr16 C 0 I 583 e nomLeu3.chr14 3683649 9512 - 94967081 M e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I a score=273.000000 s hg38.chr17_GL383566v1_alt 67895 1 + 90219 t s panTro4.chr17 76257959 1 + 82630442 t i panTro4.chr17 C 0 C 0 s macFas5.chr16 74662924 1 + 80997621 t i macFas5.chr16 C 0 I 1078 e nomLeu3.chr14 3683649 9512 - 94967081 M e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I e papAnu2.chr16 68668849 583 + 74645514 I a score=2797.000000 s hg38.chr17_GL383566v1_alt 67896 30 + 90219 gacggcgtctcgctctgtcgcccaggctgg s panTro4.chr17 76257960 30 + 82630442 gacggcgtctcgctctgttgcccaggctgg i panTro4.chr17 C 0 I 634 e nomLeu3.chr14 3683649 9512 - 94967081 M e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I e papAnu2.chr16 68668849 583 + 74645514 I e macFas5.chr16 74662925 1078 + 80997621 I a score=0.000000 s hg38.chr17_GL383566v1_alt 67926 289 + 90219 agtgcagtggctcaatctcagctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagcttgggactgcagacacaccacaccacgcccggctaatttctttatttttagtagagatggggtttcaccatgttggccagactggtcttaaactcctgacctcaggtgatccacctgccttggccacccaaagtgctgggattacaggcctgagccactgcacccggcctctttcttttttcttttcttttttttttttttttttaa e nomLeu3.chr14 3683649 9512 - 94967081 M e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e ponAbe2.chr17 67351160 2014 + 73212453 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I e papAnu2.chr16 68668849 583 + 74645514 I e macFas5.chr16 74662925 1078 + 80997621 I e panTro4.chr17 76257990 634 + 82630442 I a score=5874.000000 s hg38.chr17_GL383566v1_alt 68215 97 + 90219 aagatgtgatcgtcgggcatggtggctcacgtctgtaat-cccagcactctgggagtccgaggcgggtgg-atcatgaggtcaggtgatcgagaccatc s ponAbe2.chr17 67353174 98 + 73212453 AAGATGTGATCATcggccgtggtgggtcacgcatgtaattcccagcact-tgcgaggttgaggcgggtggcatcacgaggtcaggttatcgagaccatc i ponAbe2.chr17 I 2014 C 0 e nomLeu3.chr14 3683649 9512 - 94967081 M e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I e papAnu2.chr16 68668849 583 + 74645514 I e macFas5.chr16 74662925 1078 + 80997621 I e panTro4.chr17 76257990 634 + 82630442 I a score=14408.000000 s hg38.chr17_GL383566v1_alt 68312 77 + 90219 ctggctaacacggtgaaaccccgtctctactaaaaaaaaaaaaaaaaaaa-tgagccgggcgtggtggcgggcgcctg s ponAbe2.chr17 67353272 78 + 73212453 ctggttaacaaggtgaaaccccgtctttactaaaaaaaaaaaaaaaaaaaattagccgggcgtggtgctgggcgcttg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3693170 71 - 94967081 ctggctaacatggtgaaa-cccgtctctactaaaaatacaaaaaa------ttagccaggtgtagtggtgggcgcctg i nomLeu3.chr14 M 9512 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I e papAnu2.chr16 68668849 583 + 74645514 I e macFas5.chr16 74662925 1078 + 80997621 I e panTro4.chr17 76257990 634 + 82630442 I a score=57345.000000 s hg38.chr17_GL383566v1_alt 68389 146 + 90219 tagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcag-tgagccgagatcgcgccactgcactccagcctgggcgactgagcaagacttcgtctcaaaaaaaaaaaaaaaaaaaaaaa-------------a s panTro4.chr17 76258624 145 + 82630442 tagtcccagctactcgggaggctgaggcaggacaatggcatgaacccgggaggcggagcttgcag-tgagccgagatcgcgccactgcactcctgcctgggcgactgagcaagacttcgtctcaaaaaaaaaaaaaaaaaaaaaaa-------------- i panTro4.chr17 I 634 C 0 s ponAbe2.chr17 67353350 140 + 73212453 tagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcag-tgagctgagatcg-gttactgcactccagcctgggtgactgagcaagactttgtctcaaaaaaaaaaaaaaaaaaa------------------ i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3693241 142 - 94967081 tagtcccagctactaggga-----------------ggcatgaacccgggaggcggagttggcagccgacctgagatcg-gccactgcactccagcctgggcaactgagcaagactccgtctcaaaacaaaacaaaacaaaacaaaacaaaacaaaacaa i nomLeu3.chr14 C 0 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I e papAnu2.chr16 68668849 583 + 74645514 I e macFas5.chr16 74662925 1078 + 80997621 I a score=1159.000000 s hg38.chr17_GL383566v1_alt 68535 3 + 90219 aaa s nomLeu3.chr14 3693383 3 - 94967081 aaa i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74664003 3 + 80997621 aag i macFas5.chr16 I 1078 C 0 s papAnu2.chr16 68669432 3 + 74645514 aag i papAnu2.chr16 I 583 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e rheMac3.chr16 74853325 751 + 80904711 I e ponAbe2.chr17 67353490 0 + 73212453 C e calJac3.chr5 126537397 3591 + 159171411 I e chlSab2.chr16 30719834 792 - 75148670 I e panTro4.chr17 76258769 0 + 82630442 C a score=528480.000000 s hg38.chr17_GL383566v1_alt 68538 219 + 90219 agaTGTgatctcactatgttgcccagggtgatcttgacctactgggctcaagtgatcctcctgcctcaacttcccgagtagcagggTCATGCACTTTTGGGCCAGGATCATCT-CTTAACCTTCCTGCAAGCCCTTGCCAACTTCCtccaggcttctgcccactgcctgcgcctaaagccaatgccatgtgtttcatattttagtgaccagagcacAGTG s panTro4.chr17 76258769 216 + 82630442 -gaTATgatctcactatgttgcccagggtgatcttgacctactgggctcaagtgatcctcctgcctcaacttcccgagtagcagggaCATGCACTTTTGGGCCAGGATCATCT---TAACTTTCCTGCAAGCcctcgccaacttcctccaggcttctgcccactgcctgctcctaaagccaatgccatgtgtttcatattttagtgaccagagcacAGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67353490 216 + 73212453 -gaTATgatctcactatgttgcccagggtgatcttgacctcctgggctcaagtgatcctcctgcctcaacttcctgagtagcggggacATGCACTGTTGGGCCAGGATCATCT---TAACTTTCCTGCAAGCcctcgccaacttcctccaggcttctgcccactgcctgcgcctaaagccaatgccacgtgtttcatattttagtgaccagagcacAGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3693386 220 - 94967081 aaacGTgatctcactatgttgcccagagtgatcttgacctcctgggctcaagtgatcctcctgcctcaacttcccaagtagcggggaCATGCACTGCTGGGCCAGGATCATCTTCTTTACTTTCCTGCAAGCCCTCGCCAACTTCCtccaggcttctgcccactgcctgctcctaaagccaatgccatgtgtttcatattttAGGGAccagagcacagtg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74854076 220 + 80904711 agatgtgatctcactatgttgcccagggtgatcttgacttcctgggctcaagtcatcctcctgcctcaactccctgagtagcgggaACATGCACTATTGGACCCGGATCATCTTCTTTACTTTCCTGCAAGCCCTTGCCAACTTCCtccaggcttctgcccactgcctgctcctaaagccaatgccatgtgtttcagattttagtgaccagagcacAGTG i rheMac3.chr16 I 751 C 0 s macFas5.chr16 74664006 220 + 80997621 agatgtgatctcactatgttgcccagggtgatcttgacttcctgggctcaagtcatcctcctgcctcaactccctgagtagcgggaacatgcactattggacccggatcatcttctttactttCCTGCAAGCCCTTGCCAACTTCCtccaggcttctgcccactgcctgctcctaaagccaatgccatgtgtttcagattttagtgaccagagcacAGTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68669435 220 + 74645514 agatgtgatctcactatgttgcccagggtgatcttgacttcctgggctcaagtcatcctcctgcctcaactcccTGAGTAGCGGGAACATGCACTATTGGACCCGGATCATCTTCTTTACTTTCCTGCAAGCCCTTGCCAACTTCCTCCAGGCTTCTGCCCACTGCCTGCTCCTAAAGCCAATGCCATGTGTTTCAGATTTTAGTGACCAGAGCACAGTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30720626 220 - 75148670 agatgtgatctcactatgttgcccagggtgatcttgacttcctgggctcaagtcatcctcctgcctcaactccctgagtagcgggaACATGCACTATTGGACCCGAATCATCTTCTTTACTTTCCTGCAAGCCCTTGCCAACTTCCtccaggcttctgcccactgcctgctcctaaagccaatgccatgtgtttcagattttagtgaccagagcacAGTG i chlSab2.chr16 I 792 C 0 e canFam3.chr9 57426411 3037 - 61074082 I e calJac3.chr5 126537397 3591 + 159171411 I a score=890320.000000 s hg38.chr17_GL383566v1_alt 68757 370 + 90219 AGGCACGtcagacccattagctttctaatcaccacaccagctgtgtgagttgggggt-tgggtactgccctcccctttcataggagtgggcactgagaattggggaaattacacaactggtcataagcactcaattaggaggaggag---------------------------------------------------------------------------gagGAGGAGGAACAGAGTGTTTGAAAGACAATTTTTAAAAATTGGATAGCACAGTAGCCTGGGGACATTT-GCGAAGGAGTAAGATGGCGGCGTGTGCGTTGATAACCGTTCAAGGTGCca-tcgtgacggtcctgagccaggagggaaagagtcatatgtttgctatgctcttctcaccaaggcaggggattgtgtcatatgttttagagagttgtctgtgaaaa s panTro4.chr17 76258985 367 + 82630442 AGGCACttcagacccattagctttctaatcaccacaccagctgtgtgagttgggggggtgggtactgccctcccctttcataggagtgggcactgagaattggggaaattacacaactggtcATAAGCACTCa----ggaggaggag---------------------------------------------------------------------------gaggaggaggaACAGAGTGTTTGAAAGACAATTTTTAAAAATTGGATAGCACAGTAGCCTGGGGACATTT-GCGAAGGAGTAAGATGGCGGTATGTGCGTTGATAACCGTTCAAGGTGCca-tcgtgacggtcctaagccaggagggaaagagtcatatgtttgctatgctcttctcaccaaggcaggggactgtgtcatatgttttagagagttgtctgtgaaaa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67353706 369 + 73212453 aggcacttcagacccattagctttctaatcaccacaccagctgtgcgagttgtgggggtgggtactgccctcccctttcacaggagtggacactgagaattggggaaattacacaactggtcataagcactcaatt---aggaggag---------------------------------------------------------------------------gaggagGAGGAACAGAGTGTTTGAAAGACAATTTTTAAAAATTGGATagcacagtagcctggggacatttagcgaaggagtaagatggcagtatttgcgttgataaccgttccaggtgcca-tcatgacggtcctgagccaggagggaaagagtcatatgtttgctatgctcttctcaccaaggcaggggattgtgtcatatgttttagagagttgtctgtgtaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3693606 364 - 94967081 aggcacttcagacccattagctttctaatcaccacaccagctatgcgacttgggggggtgggtactgccctcccctttcataggagtgaacactgagaattggggaaattacacaactggtcataagcacccagtt------aggag---------------------------------------------------------------------------gaggaggaggaactgagtgtttgaaagacaattttaaaaaattggatagcacagtagcctggggacatttagcgaaggagtaagatggcagtatatgcgttgataaccgttcaaggtgcca-tcgtgacggccctgaaccaggagggaaagagtc--atgtttgctatgctcttctcaccaaggcaggggattgtgtcatatgttttagagagttgtctgtgtaaa i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74854296 394 + 80904711 aggcacttcagacccattagctttctaatcatcataccagctgtgcgagttgggggg----ttactgccctcccctttcataggagtgaacactgagaattggggaaattacacaactggtcataagcacccagttaggaggaggag------------------------------------------------gatgaggaggaggaggaggaggaggagaaggaggaggaACTGAGTGTTtgaaagacagtttaaaaaaattggatagcacagtagcctggggacatttagtgaa-gagtaagatggctgtatgtgcattgataactgttcaaggtgcca-tcgtgacggtcctgaactgggagggaaagagtcatatgtttgctatgctcttctcaccaaggcaggggattgtgttgtctgttttagagagttgtctgtgaaaa i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74664226 442 + 80997621 aggcacttcagacccattagctttctaatcatcataccagctgtgtgagttgggggg----ttactgccctcccctttcataggagtgaacactgagaattggggaaattacacaactggtcataagcacccagttaggaggaggaggatgaggaggaggagaaggaggaggaggagaaggagaaggaggaggaggatgaggaggaggaggaggaggaggagaaggaggaggaACTGAGTGTTTGAAAGACAGTTTAAAAAAATTGGATAGCACAGTAGCCTGGGGACATTTAGTGAA-GAGTAAGATGGCTGTATGTGCATTGATAACTGTTCAAGGTGCca-tcgtgacggtcctgaactgggagggaaagagtcatatgtttgctatgctcttctcaccaaggcaggggattgtgttgtctgttttagagagttgtctgtgaaaa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68669655 367 + 74645514 AGGCACTTCAGACCCATTAGCTTTCTAATCATCATACCAGCTATGCGAGTTgggggg----gTACTGCCCTCCCCTTTCATAGGAGTGAACACTGAGAATTGGGGAAATTACACAACTGGTCATAAGCACCCAGttaggaggaggag---------------------------------------------------------------------------aaggaggaggaactgagtgtttgaaaaacagttttaaaaaattggataGCACAGTAGCCTGGGGACATTTAGCGAA-GAGTAAGATGGCTGTATGTGCATTGATAACCGTTCAAGGTGCCA-TCGTGACGGTCCTGAACTGGGAGGGAAGGAGTCATATGTTTGCTATGCTCTTCTCACCAAGGCAAGGGATTGTGTTGTATGTTTTAGAGAGTTGTCTgtgaaaa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30720846 382 - 75148670 aggcacttcagacctatcagcttgctaatcctcataccagctgtgcgagttgggggg----ttactgccctcccctttcataggagtgaacaccaagaattggggaaattacacaactggtcataagcacccagttaggaggagaag------------------------------------------------------------gaggaggaggaggagaaggaggaggaACTGAGTGTTTGAAAGACAGTTTTTAAAAATTGGATAGCACAGTAGCCTGGGGACATTTAGTGAA-GAGTAAGATGGCTGTATGTGCATTGATAACTGTTCAAGGTGCca-tcgtgatggtcctgaactgcgagggaaagagtcatatgtttgctatgctcttctcaccaaggcaggggattgtgttgtatgttttagagagttgtctgtgaaaa i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57429448 320 - 61074082 aggcgctccTGTAacattgcttttctaatcagtacatccgcctcgcaagccaagtaa---gatactgtgatccacatttataggagcagaaaccgagactcagagaagtcgtgtggcttgtgacaag----------------gGAG---------------------------------------------------------------------------------------CCGAGTG-TTGAAGAAGAATCTTTAAAAGTTGGCTAGCAT-GTGGCCTGGGGATGTTTCACGAAGAAGCAACATAGCGGTGTATGAGTCGGTCACCGTTAAAGGTGTCATTTAAGATGATCTTGAGCCAAGAGAAA-----------GGTTGATACATTCT----ATTAAGGCGGGTG-----GTTATATGTTTTAGAGAGTCATCCATAAAGA i canFam3.chr9 I 3037 I 1 e calJac3.chr5 126537397 3591 + 159171411 I a score=768160.000000 s hg38.chr17_GL383566v1_alt 69127 344 + 90219 acaattaaaacttgatgcttaggccgggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacttgaggtcaggagttggagaccagcctggctaacgtggtgaaaccccatctctactaaaaatacaaaaattaatcgggcctggtggcagcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaatgtgggaggcagaggttg-cagtgagccaagatcatgccattaaactccaacctgggtgacaagagcaaaactccatctc-aaaaaat-aaaaattaaatt--aaaaaaataaaaaaaaaa s panTro4.chr17 76259352 343 + 82630442 acaattaaaacttgatgcttaggccgggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacttgaggtcaggagttggagaccagcctggctaacgtggtaaaaccccatctctactaaaaatacaaaaattaatcgggcctggtggcagcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaatgcgggaggcagaggttg-cagtgagccaagatcatgccattaaactccaacctgggtgacaagagcaaaactccatctc-aaaaaat-aaaaattaagtt--aaaaaaataataaaaaa- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67354075 337 + 73212453 acaattaaaactTGATGCTTAgaccggatgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcggatcacttgaggtcaggagttggagaccagcctggctaacgtggtgaaaccccatctctactaaaaatacaaaaattaatcgggcctggtg---gcaggcatctgtaatcccagttacttgggaggctgaggcaggagaatcacttgaatgcgggaggcagaggttg-cagtgagccaagatcatgccattaaactccaacccgggtgacaagagcaaaactccatctc-aaaaaat-aaaa---aaaat--aaaaaattaaaaaaaaA- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3693970 337 - 94967081 acaattaaaactTGATGCTTAggccgggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcggatcacttgaggtcaggagttggagaccagcctggctaacggggtgaaaccccatctctactaaaaatacaaaaattaatcaggcctggtg---gcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaatgtgggaggcagaggttgacagtgagccaagatcatgccattaaactccaacccgggtgacaagagcaaaactccatctc-aaaaaat-aaaaattaaatt--aaaa----aataaaaaa- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74854690 334 + 80904711 acaattaaaactTGATGCTTAggccaggggcagtggctcacgcctgtaatcccagcactttgggaggtcaaggcaggtggatcacttgaggttaggagtttgagaccagcctggctaaggtggtgaaaccccagctctactaaaaatacaaaaattagaccggccttatg---gcgggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaatgcaggaggcagaagttg-cagtgagctgagatcatgccattaaactccaatctgagtgacaagagcaaaactc---ctcaaaaaaat-aaaaattaaatt--aaaa----aaaaaaaaG- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74664668 334 + 80997621 acaattaaaacttgatgcttaggccaggggcagtggctcacgcctgtaatcccagcactttgggaggtcaaggcaggtggatcacttgaggttaggagtttgagaccagcctggctaaggtggtgaaaccccatctctactaaaaatacaaaaattagtcaggccttgtg---gcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaatgcaggaggcagaagttg-tagtgagccgagatcatgccattaaactccaatctgagtgacaaaagcaaaactc---ctcaaaaaaat-aaaaattaaatt--aaaa----aaaaaaaaG- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68670022 335 + 74645514 acaattaaaacttgATGCttaggccaggggcagtggctcacgcctgtaatcccagcactttgggaggtcaaggcaggtggatcacttgaggttaggagtttgagaccagcctggctaaggtggtgaaaccccatctctactaaaaatacaaaaattagtcaggcctggtg---gcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaatgcaggaggcagaggttg-cagtgagccgagatcatgccattaaaCTCCAatctgagtgacaagagcaaaactc---ctc-aaaaaat-aaaaattaaattaaaaaa----aaaaaaaag- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30721228 334 - 75148670 acaattaaaactTGATGCTTAggccaggggcagtggctcacgcctgtaatcccagcactttgggaggtcaaggcaggtggatcacttgaggttaggagtttgagaccagcctggctaaggtggtgaaaccccatctctactaaaaatacaaaaa-tagtcaggcctggtg---gcacgtacctgtcatcccagctacttgggaggctgaggcaggagactcgcttgaatgcaggaggcagaggttg-cagtgagccgagatcatgccattaaactccaatctgagtgacaagagcaaaactc---ctcaaaaaaataaaaaattaaatt--aaaa----aaaaaaaaG- i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57429768 1 - 61074082 I e calJac3.chr5 126537397 3591 + 159171411 I a score=376234.000000 s hg38.chr17_GL383566v1_alt 69471 149 + 90219 TAggccaggcgcagtggctcacacctgtaatcccagcactttgggaggcctaggcaggtggatcaccttgaggtcaggagttggagaccaggctggccaacatggcaaaaccccgtctctactaaaaatacaaaaattagccggttgtg s panTro4.chr17 76259695 149 + 82630442 TAggccaggtgcagtggctcacacctgtaatcccagcactttgggaggcctaggcaggtggatcaccttgaggtcaggagttggagaccaggctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagccagttgtg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67354412 135 + 73212453 --------------Aggctcacacctgtaatcccagcactttgggaggcctaggcaggtggatcaccttgaagtcaggagttggagaccaggctggccaacatggcaaaaccccatctctactaaaaatgcaaaaattaaccggtcgtg i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3694307 148 - 94967081 TAggccaggtgcagcggctcacacctgtaatcccagcactttgggaggcctaggcaggtggatca-cttgaggtcaggagttggagaccagcctggccaacatggcgaaaccccgtctctactaaaaatataaaaattagctggttgtg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74855024 146 + 80904711 --GCccaggagcagcagctgatacttataatcccagtactttgggaggcctaggcaggtggatca-cctgaggtcaggagttggagaccaagctgaacaacatagcaaaaccctgtctctactaaaaatacaaaaattaaccggttgtg i rheMac3.chr16 C 0 I 371 s macFas5.chr16 74665002 146 + 80997621 --GCccaggcgcagcagctgatacttataatcccagtactttgggaggcctaggcaggtggatca-cctgaggtcaggagttggagaccaagctgaacaacatagcaaaaccctgtctctactaaaaatacaaaaattaaccggtcgtg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68670357 146 + 74645514 --gcccaggcacagcagctcatacttataatcccagtactttgggaggcctaggcaggtggatca-cctgaggtcaggagttggagaccaagctgcacaacatagcaaaaccctgtctctactaaaaatacaaaaattaaccggtcatg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30721562 146 - 75148670 --ACccaggtgcagcagctcatacttataatcccagtactttgggaggcctaggcaggtggatca-cctgaggtcaggagttggagaccaagctgaacaacatagcaaaaccctgtctctactaaaaatacaaaaattaaccggtcatg i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126540988 134 + 159171411 tacgctgggtttggtggctcacacttgtaatcccagcactttgggaggccaagg---------------agggtcaggagttcaagaccagtctggccaatgtggtgaaaccctgtctgtactaaaaatagaaaaattagtcgggcatg i calJac3.chr5 I 3591 C 0 e canFam3.chr9 57429768 1 - 61074082 I a score=93060.000000 s hg38.chr17_GL383566v1_alt 69620 39 + 90219 gtggcgtgtgcctgtaatcccagctacttgggaggctga s panTro4.chr17 76259844 39 + 82630442 gtggcgtgtgcctgtaatcccagctacttgggaggctga i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67354547 39 + 73212453 atggcgtgtgcctgtaatcccagctacttcggaggctga i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3694455 39 - 94967081 gtggcatgtgcctgtaatcccagctagttgggaggctga i nomLeu3.chr14 C 0 M 2515 s macFas5.chr16 74665148 39 + 80997621 gtggcgtgtgcctgtaatcccacctacttgggaggctga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68670503 39 + 74645514 gtggcgtgtgcctgtaatcccacctacttgggaggctga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30721708 39 - 75148670 gtggcgtgtgcctgtaatcccaactacttgggaggctga i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126541122 39 + 159171411 gtggcagatgcctgtaatcccagctacttaggaggctga i calJac3.chr5 C 0 C 0 e canFam3.chr9 57429768 1 - 61074082 I e rheMac3.chr16 74855170 371 + 80904711 I a score=484671.000000 s hg38.chr17_GL383566v1_alt 69659 352 + 90219 ggcaagagaattgcttgaatccgggaggtggacgttgtagtgagctgagatcatgccactgcactctagcctgggtgacagaggga-gactctgtctc---------------------ataaataaataaataaaccaggtgcggtggctcacacctgtaatcccagcac-tttgggaggctgaggc--ggggggatcacctcaggttaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaaagaaaaaaat-tacaa----------------------------------------------------------------------------------aaaaaaaaaaa-t-----------tagccaggt---gtggcgggcacctgtaatctcag---ctactcaagaggctgaggctggagaatcacttgaacctgggaggcagaggttgcag s panTro4.chr17 76259883 353 + 82630442 ggcaagagaattgcttgaatccgggaggtggacgttgtagtgagctgagatcatgccactgcactctagcctgggtgacagaggga-gactctgtctc---------------------ataaataaataaataaaccaggtgcggtggctcacacctgtaatcccagcac-tttgggaggctgaggc--ggggggatcacctcaggttaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaaagaaaaaaat-tacaa----------------------------------------------------------------------------------aaaaaaaaaaaat-----------tagccaggt---gtggcgggcacctgtaatctcag---ctactcaagaggctgaggctggagaatcgcttgaacctgggaggcagaggttgcag i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67354586 359 + 73212453 ggcaggagaattgcttgaatctgggaggtggaggttgcagtgagctgagatcatgccactgccctctagcctgggtgacag-ggga-gactctgtctc-----------------ataaataaataaataaataaaccaggtgcagtggctcacacctgtaatctcagcac-tttgggaggctgaggcaggggggaatcacctgaggttaggagtttgagaccagcctggctaacatggtgagaccctgtctctactaaaaaataaaaaaatacaaaa----------------------------------------------------------------------------------aaaaaaaaaaaat-----------tagccaggt---gtggtgggcacctgtaatctcag---ctactcaggaggctgaggctggagaatcgcttgaacccaggaggcagaggttgcag i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 74665187 379 + 80997621 ggcagaagaatcgcttgaatccaggaggtggaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacaga-----------gTCTCa-------------taaataaataaataaataaataaaccaggtgcgatggctcacacctgtaatcccagcac-tttgggagactgaggt--gggcagatcacctgaggttaggagtttgagaccagcctggccaacctgatgaaaccctatctctactaaaaaagaaaaaaat-tacta--------tatatat------------------------------------------------------------atatatatatatatatatatatatatatatatagacaggtgtggtggcgggcacctgtaatctcaa---ctactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcag i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68670542 363 + 74645514 ggcagaagaatcgcttgaatccaggaggtggaggttgcagtgagctgagatcatgccactgcactccagtgtgggtgacaga-----------gtctca-------------taaataaataaataaataaataaaccaggtgcgatggctcacacctgtaatcccagcac-tttgggagactgaggt--gggcagatcacctgaggctaggagtttgagaccagcctggccaacctgatgaaaccctatctctactaaaaaagaaaaaaat-tac------------------------------------------------------------------------------------aaaaaaaaaaaatatatatatatatagacaggtatggtggcgggcacctgtaatctcaa---ctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcag i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30721747 442 - 75148670 ggcagaagaatcgcttgaatccaggaggtggaggttgcagtgagctgagatcaagccactgcactctagcctgggtgacaga-----------gTCTCa-------------taaataaataaataaataaataaaccaggtgcgatggctcatacctgtaatcccagcacttttaggagactgaggt--gggcagatcacctgaggttaggagtttgagaccagcctggccaacctgatgaaaccctatctctactaaaaaagaaaaaaat-tacaaaaaaataggatatattacattattgatttccttcatgaaatgaaagaagatctactaaaaaagaaaaaaattacaaaaaaaaaaaaaatatatatatatatatatatagacaggt------gcgggcacctgtaatctcaa---ctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggtcgtag i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126541161 372 + 159171411 ggcaggagaatcatttgaatgtgtgaggtagacattgcagtgagccaaaatcac-ccactgagcttcaacctaggtgacaaaagcataactccatctcaaaaaaataaaaattaaattaaaaaattaaaaaaTAgacctggtgcagtggctcaggcctgtaatcccagcac-tttggcaggctgaggt--gagtggatcacctgaggtcaggactttgagaccagcctggccaacatggtgaaaccctgtctgtactaaaaaataaaa-----taaaa----------------------------------------------------------------------------------taacaaaaaaaat-----------tagctgggt---gt-gcaggcacctgtaatcccagctactacttgggaggctgagtcaggagaattgcttggaccagggcagcacaggttgcag i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3694494 2515 - 94967081 M e canFam3.chr9 57429768 1 - 61074082 I e rheMac3.chr16 74855170 371 + 80904711 I a score=166873.000000 s hg38.chr17_GL383566v1_alt 70011 83 + 90219 tgagctgagatcgcaccattgcactccagcctcggcgacgagggcaaaactccctctcaaaaaataaaaaataaa--aataaata s panTro4.chr17 76260236 83 + 82630442 tgagctgagatcgcaccattgcactccagcctcggcaacgagggcaaaactccctctcaaaaaataaaaaataaa--aataaata i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67354945 83 + 73212453 tgagctgagatcgcaccattgcactccagcctgagcgacgagggcaaaactccctctcaaaaaatcaaaaataaa--aataaaga i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74855541 85 + 80904711 tgagctgagatcacaccattgcactccagcctgggcgacgacagcaaaactccctctcaaaaactaaaaaataaaagaaaaaata i rheMac3.chr16 I 371 C 0 s macFas5.chr16 74665566 80 + 80997621 tgagctgagatcacaccattgcactccagcctgggcgacgacagcaaaactccctctcaaaaactaaaaaat-----aaaaaata i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68670905 85 + 74645514 tgagctgagatcacaccattgcactccagcctgggcgacgacagcaaaactccctctcaaaaactaaaaaataaaagaaaaaata i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30722189 85 - 75148670 tgagctgagatcacaccattgcactccatcctgggcgacgacagcaaaactccctctcaaaaactaaaaaataaaagaaaaaata i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126541533 77 + 159171411 tgagccgagatggtgacactgcactccagcctgagtgacaagagcaaaactctctctcaa------ataaataaa--taaaaata i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3694494 2515 - 94967081 M e canFam3.chr9 57429768 1 - 61074082 I a score=4260549.000000 s hg38.chr17_GL383566v1_alt 70094 1746 + 90219 aa-------taaaaacaaaa-tttgaggcttaaacaattaagcttcGTGCATCT---------------------------CTTTAATTTTTCTTTTTTTTTTTTAACTCTAATTTCATGACAGATTAAGCTTCATGCATCTCAAAAATGTGTAGAA-CCCTCATT-CCCAGCCTTCCCTCCCT--CTCTCTTGTCCTTCTTTCTGATTTCTTGGAATCGGAAGGAAAATTCGGATATCCAGGAACCATCACACAGGAGGCACCCATGTGATGTGTCCAACATCACT-CCACGCAGGTGTCCTTGGGTCCTGGGTGCCCAGGTTCCTGTGAATTGTGACCC-CAGGCAGAAGC-GTGAGCATCCGCAGAGGAACCCACCTACCCAAAGCCAGGGAACAGCCAGGGCTGGCATCCTCAGGGTGACTGTGCTCCAGGGCACCTCTGACTTGTGCTGAGTAAAATGGACAAAGCCAGCAATGCACCCATAACCCAGATTCTTGAGACACCGCTGGACTTTGGGAATCCCAGGCATTAGGCTCGTGGCAGTGTCATCATGGCTAGGCTGGGGGCAGTGTCATCATGGTGCTTGCTGGCCA-AGTCAGGACACGGCCTAAGC----CGGAATCTGC--------------------TGGTGCTGGTACAAGCGgtgagtgggcgtgtgggtgggggttgcggttagggtgtggACATCCCAGAATCCA-GGACGCTGTTCAC---AATTCGTCCATACTCC------------CTGCTCCCCTCCCTTACAGCACTTCCCTCCCGAGGCCTCCTGAGCCTCTAACCCCCAGATAAGGAA--AGGGGTGGACTCAGTTGAAGTCCAGTGTCCACTCCGGTCCAATCAGCTCTACCTGGGGTGAGGGGAAACTCCTCTGGCTGGGCTGCTCCC-------------------------------------------------------------------------------------------------------------------TCTGCAGGGCTGTGGCTGG--------------------------------------------ACAGATTACTCAAGAAAGGAAGCAGGTGGGCCGGAACGAACCCACGGTGCCACATAGGCCTCCGTTCTC----ATGCATATAAGTTTCCCACACTCAGGCAGGAAATGAAAATGCTTCTTGGACCCCCAAGGAGAGTAAAGGAGAGGGGAAGAGGAGGAGGATTTTTCGGGGCTGTTAGTGACACTTTCAGCCTCC--TGTGCATTTTTGGGAGGGCTGCAGGAGAAGGCAATGCTGCGCCCCTACCCAGAACTAGCGAGCGCTTcccaactggcctcccgccttcctctcgtc-ctctacggcctccattggcagctgtgcaagggcccggccctgcctctgtctctccacactcgctgtgatacctcaggcctcccaggctccgccacgcccttccctctttcgggaacag-ctgccttccatcaccttggctgcctggctaattcctgctcattccttaaaaccctgttttga------------------------ttt-----cgcctcaataaaactc-tgacaccaccctccagtcataattagtcacttcttcctctgtacGTT-GGAAACACCGCTTTATCGTGGAGA----CTTTAAGGATATCCAAGTAGAGAGAATTCTTCCGTGCAAGTTT----------TGCATCCTCTCACCACTGCCTGCGTTACCCGAGTTGTAAAGG-GCGGCTCCCTGTGTCTGCCCCGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATgatcatctg--------------------tccaacgcgccca-tttacaggtgaggaaactaagg-ctcCAACTC-----AATCGACGCACTCTGCCCTTTTGATTACCAGAAAAGTAGCAGGACAGGTGTCC-----TGTCCCGCCCTACCCCGGCCCACTAAGCCGGCACCCCGGCTCCGACCCCC--GGCTGTGCCCGGCG s panTro4.chr17 76260319 1737 + 82630442 aa-------taaaaacaaaa-tttgaggcttaaacaattaagcttcGTGCAACT---------------------------CTTT-----TTCTTTTTTTTTT--AACTCTAATTTCATGACAGATTAAGCTTCGTGCATCTCAAAAATGTGTAGAA-CCCTCATT-CCCAGCCTTCCCTCCCT--CTCTCTTGTCCTTCTTTCTGATTTCTTGGAATCGGAAGGAAAATTCGGATATCCAGGAACCATCACACAGGAGGCACCCATGTGATGTGTCCAACATCACT-CCACGCAGGTGTCCTTGGGTCCTGGGTGCCCAGGTTCCTGTGAATTGTGACCC-CAGGCAGAAGC-GTGAGCATCCGCAGAGGAACCCACCCACCCAAAGCCAGGGAACAGCCAGGGCTGGCATCCTCAGGGTGACTGTGCTCCAGGGCACCTCTGACTTGTGCTGAGTAAAATGGACAAAGCCAGCAATGCACCCATAACCCAGATTCTTGAGACACCGCTGGACTTTGGGAATCCCAGGCATTAGGCTCGGGGCAGTGTCATCATGGCTAGGCTCGGGGCAGTGTCATCATGGTGCTTGCTGGCCA-AGTCAGGACACAGCTTAAGC----CGGAATCTGC--------------------TGGTGCTGGTACAAGCGGTGAGTGGGCGTGTGGGTGGGGGTTGCGGTTAGGGTGTGGACATCCCAGAATCCA-GGACGCTGTTCAC---AATTCGTCCATACTCC------------CTGCTCCCCTCCCTTACAGCACTTCCCTCCCGAGGCCTCCTGAGCCTCTAACCCCCAGATAAGGAA--AGGGGTGGACTCAGTTGAAGTCCAGTGTCCACTCCGGTCCAATCAGCTCTACCTGGGGTGAGGGGAAACTCGTCTGGCTGGGCTGCTCCC-------------------------------------------------------------------------------------------------------------------TCTGCAGGGCTGTGGCTGG--------------------------------------------ACAGATTACTCAAGAAAGGAAGCAGGTGGGCCGGAACGAACCCACGGTGCCACATAGGCCTCCGTTCTC----ATGCATATAAGTTTCCCACACTCAGGCAGGAAATGAAAATGCTTCTCGGACCCCCAAGGAGAGTAAAGGAGAGGGGAAGAGGAGGAGGATTTTTCGGGGCTGTTAATGACACTTTCAGCCTCC--TGTGCATTTTTGGGAGGGCTGCAGGAGAAGGCAGTGCTGCGCCCCTACCCAGAACTAGCGAGTGcttcccaattggcctcccgccttcctctcgtc-ctctacggcctccattggcagctgtgcaagggcctggccctgcct--gtctctccacactcgctgtgatacctcaggcctcccaggctccgccacgcccttccctctttcgggaacag-ctgccttccatcaccttggctgcctggctaattcctgctcattccttaaaactctgttttga------------------------ttt-----cacctcaataaaactc-tgacaccaccctccagtcataattagtcacttcttcctctgtacGTT-GGAAACACCGCTTTATCGTGGAGA----CTTTACGGATATCCAAGTAGAGAGAATTCTTCCGTGCAAGTTT----------TGCATCCTCTCACCACTGCCTGCGTTACCCGAGTTGTAAAGG-GCGGCTCCCTGTGTCTGCCCCGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATgatcatctg--------------------tccaacgcgccca-tttacaggtgaggaaactaagg-ctcCAACTC-----AATCGACGCACTCTGCCCTTTTGATTACCAGAAAAGTAGCAGGACAGGTGTcc-----tgtcccgccctaccccggcccactaagccggcaccccggctccgaccccc--ggctgtgcccggcg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67355028 1721 + 73212453 aaaaaTAATTAAAAACAAAA-TTTGAGGCTTAAACAATTAAGCTTCGTGCATCT---------------------------CTTTAATTTTTCTTTTTTTA----AACTCTAATTTCATGACAGATTAAGCTTCATGCATCTCAAAAATGTGTAGAA-CCCTCATT-CCCAGCCTTCCCTCCCT--CTCTCTTGTCCTTCTTTCTGATTTCTTGGAATCAGAAGGAAGATTCGGATATTCAGGAACCATCACACAGGAGGCACCCATGTGATGTGTCCAACATCACT-CCATGCAGGTGTCCTTGGGTCCTGGGTGCCCAGGTTCCTGTGAATTGTGACCC-CAGGCAGAAGC-GTGAGCATCTGCAGAGGAACCCACCCACCCAAAGCCAGGGAACAGCCAGGGCTGGCATCCTCAGGGTGACTGTGCTCCAGGGCACCTCTGACTTGTGCTGAGTAAAATGGACAAAGCCAGCAATGCACCCATAACCCAGATTCCTGAGACACCGCTGGACTTTGGGAATCCCAGGCATTAGGCTCGGGGCAGTGTCATCATGGC--------------------------GCTTGCTGGCCA-AGTCAGGACACAGCCTAAGC----CAGAATCTGC--------------------TGGTGCTGGTACAAGCGGTGAGTGGGCGTGTGGGTGGGGGTTGCGGTTAGGGTGTGGACATCCCAGAATCCA-GGACGCTGTTCAC---AATTCGTCCACACTCC------------CTGCTCCCCTCCCTTATAGCACCTCCCTCCCGAGGCCTCCTGAGTCTCTAACCCCCAGATAAGGAA--AGGGGTGGACTCAGTTGGAGTCCAGTGTCCACTCCGGTCCAGTCAGCTCTACCTGGGGTGAGGGGAAGCTCCTCTGGCTGGGCTGCTCCC-------------------------------------------------------------------------------------------------------------------TCTGCAGAGCTGTGGCTGG--------------------------------------------ACAGATTACTCAAGAAAGGAAGCAGGTGGGCCGGAACGAACCCACGGTGCCACATAGGCCTCTGTTCTC----ATGCATATAAGTTTCCTACACTCAGGCAGGAAATGAAAATGCTTCTTGGACCCCCAAGGAGAGTAAAGGAGAGGGGAAGAGGAGGAGGATTTTTCGGGGCTGTTAATGACACTTTCAGCCTCC--TGTGCATTTCTGGCAGGGCTGCAGGAGAAGGCAGTGCTGTGCCCCTACCCAGAACTAGCGAGTGcttcccaattggcctcccgccttcctctcgtc-ctctacggcctccatcggcagctgtgcaagggccctgccctgcctctgtctctccacactcgc--tgatacctcaggcctcccaggctccgccacgcccttccctctttcgggaacag-ctgccttccatcaccttagctgcctggctaattcctgctcattccttaaaaccctgttttga------------------------ttt-----cgcctcaataaaactc-tgacaccaccctccagtcataattagtcacttcttcctctgtacGTT-GGAAACACCGCTTTATCGTGGAGA----CTTTAAGGATATCCAAGTAGAGAGAATTCTTCCGTGCAAGTTT----------TGCATCCTCTCACCACCGCGTGCGTTACCCGAGTTGTAAAGG-GCGGCTCCCTGTGTCTGCCCCGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATgatcatctg--------------------tccaacgcgccca-tttacaggtgaggaaactaagg-ctcCAACTC-----AATCGACGCACTCTGCCCTTTTGATTACCAGAAAAGTAGCAGGACAGGTGTCC-----TGTCCCGCCCTACCCCGGCCCACTAAGCCGGTACCCCGGCTCCGACCCCC--GGCTGTgcccggcg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74855626 1718 + 80904711 aa-------TAAAAACAAAA-TTTGATGCTTAAACAATTAAGCTTCATGCATCT---------------------------CTTTAATTTTTCTTTTATTTA---AACTCTAATTTCATGACAGATTAAGCTTCATGAATCTCAAAAATGTGTAGAA-CCCTCACT-CCCAGCCTTCCCTCCCT--CTCTCTTGTCCTTCTTTCTGATTTCTTGGAATCAGAAGGAAGATTCAGATATTCAGGAACCACCTCACAGGAGGCACCCAGGTGACGTGTCCAACATCACT-CCATGCAGGTGTCCTTGGGTCCTGGGTGCCCAGGTTCATGTGAATTGTGACCC-CAGGCAGAAGC-GTGAGCATCTGCAGAGGAACCTGCCCACCCAAAGCCAGGGAACAGCCAAGGCTGGCAT-CTCAGGGTGGCTGTGTGCCAGGGCACCTCTGACTTGCGCTGAGTCAAATGGACAAAGCCCGCAATGCACCCATAACCCAGATTCTTGAGACCCCGCTTGACTTTGGGAATCCCAGGCATTAGGCTCGGGGCAGTGTCATCATGGC--------------------------GCTTGCTGGCCA-AGTCAGGACACAGCCTAAGC----CGGAATCTGC--------------------TGGTGCTGGTATAAGCGGTGAGTGGGCGTGTGGGTGGGGGTTGCGGTTAGGGTGTGGACATCCCGGAATCCA-GGACTCTGTTCAC---AATTCGTCCACACTCC------------CTGCTCCCCTCCCTTACAGCACCTCCCTCCCGCGGCCTCCTGAGCCTCTAACCCCCAGATAAGGAA--AGGGGTGGACTCAGTTGGAGTCCAGTGGCCGCTCCGGTCCAATCAACTCTACCTGGGGTAAGGGGAAGCTCCTCTGGCCGGGCTGCTCCC-------------------------------------------------------------------------------------------------------------------TCTGCAGGGCTGTGACTGG--------------------------------------------ACAGATTACTCAAGAAAGGAAGCAGGTGGGCCGGAACGAACCCATGGTGCCACATAGGCCTCCGTTCTC----ATGCATATAAGTTTCCCACACTCAGGCAGGAAATGAAAATGCTTCTTGGACCCCCAAGGAGAATAAAGGAGAGGGGAAGGGGAGGAGGATTTCTCGGTGCTATTAATGACACTTTCAGCCTCC--TGTGCATTTTTGGGACGGCTGC---AGAAGGCAGTGCTGCGCCCCTACCCAGAACTAGCGAGTGCTTCCCAATTGGCCTCCCGCCTTCCTCTCGTC-CTCTAGGGCCTCCATTGGCAGCTGTGCAAGGGCCCGGCCCTGCCTCTGTCtctccacactcgctgtgatacctcaggcctcccaagctccgccacgcccttccctctttcgggaacag-ctgccttccatcaccttggctgcctggctaattcctgctcattccgtaaagccctgttttga------------------------ttt-----ctcctcaataaaactc-tgacaccaccctccagtcagaattagtcacttctttctctgtacGTT-GGAAACACCGCTTTATCGTGGAGA----CTTTAAGGATCTCCAAGTAGAGAGACTCCTCTCGTGCAGGTTG----------TGCACCCTCTCACCACCGCGTGCGTTACCCGAGTTGTAAAGG-GCGGTTCCCTGTGTCTGCCCAGCTGCACCGATACACCCAGCTGCGCACGGTGCCCAGCGCAGGGAGAACGAATgatcatctg--------------------tccaacgcgccca-ttttcgggtgaggaaactaagg-ctcCAACTC-----GATCAACGCACTCTTCTCTGTTGATTACCAGAAAAGTAGCAGGACAGGTGTCCGGTCCTGTCCCACGCTACCCCGGCCCATTAAGCCGGCACCCCGGCTCCGACCCCC--GGCTGTGCCCGGCG i rheMac3.chr16 C 0 M 390 s macFas5.chr16 74665646 1718 + 80997621 aa-------taaaaacaaaa-tttgatgcttaaacaattaagcttcatgcatct---------------------------CTTTAATTTTTCTTTTATTTA---AACTCTAATTTCATGACAGATTAAGCTTCATGAATCTCAAAAATGTGTAGAA-ccctcact-cccagccttccctccct--ctctcTTGTCCTTCTTTCTGATTTCTTGGAATCAGAAGGAAGATTCAGATATTCAGGAACCATCTCACAGGAGGCACCCAGGTGACGTGTCCAACATCACT-CCACGCAGGTGTCCTTGGGTCCTGGGTGCCCAGGTTCCTGTGAATTGTGACCC-CAGGCAGAAGC-GTGAGCATCTGCAGAGGAACCTGCCCACCCAAAGCCAGGGAACAGCCAAGGCTGGCAT-CTCAGGGTGGCTGTGTGCCAGGGCACCTCTGACTTGCGCTGAGTCAAATGGACAAAGCCCGCAATGCACCCATAACCCAGATTCTTGAGACCCCGCTTGACTTTGGGAATCCCAGGCATTAGGCTCGGGGCAGTGTCATCATGGC--------------------------GCTTGCTGGCCA-AGTCAGGACACAGCCTAAGC----CGGAATCTGC--------------------TGGTGCTGGTATAAGCGgtgagtgggcgtgtgggtgggggttgcggttagggtgtggACATCCCAGAATCCA-GGACTCTGTTCAC---AATTCGTCCACACTCC------------CTGCTCCCCTCCCTTACAGCACCTCCCTCCCGAGGCCTCCTGAGCCTCTAACCCCCAGATAAGGAA--AGGGGTGGACTCAGTTGGAGTCCAGTGGCCGCTCCGGTCCAATCAACTCTACCTGGGGTGAGGGGAAGCTCCTCTGGCCGGGCTACTCCC-------------------------------------------------------------------------------------------------------------------TCTGTAGGGCTGTGACTGG--------------------------------------------ACAGATTACTCAAGAAAGGAAGCAGGTGGGCCGGAACGAACCCATGGTGCCACATAGGCCTCCGTTCTC----ATGCATATAAGTTTCCCACACTCAGGCAGGAAATGAAAATGCTTCTTGGACCCCCAAGGAGAATAAAGGAGAGGGGAAGGGGAGGAGGATTTCTCGGTGCTATTAATGACACTTTCAGCCTCC--TGTGCATTTTTGGGACGGCTGC---AGAAGGCAGTGCTGCGCCCCTACCCAGAACTAGCGAGTGCTTCCCAATTGGCCTCCCGCCTTCCTCTCGTC-CTCTAGGGCCTCCATTGGCAGCTGTGCAAGGGCCCGGCCCTGCCTCTGTCtctccacactcgctgtgatacctcaggcctcccaagctccgccacgcccttccctctttcgggaacag-ctgccttccatcaccttggctgcctggctaattcctgctcattccttaaagccctgttttga------------------------ttt-----ctcctcaataaaactc-tgacaccaccctccagtcagaattagtcacttctttctctgtacGTT-GGAAACACCGCTTTATCGTGGAGA----CTTTAAGGATCTCCAAGTAGAGAGACTCCTCTCGTGCAGGTTG----------TGCACCCTCTCACCACCGCGTGCGTTACCCGAGTTGTAAAGG-GCGGTTCCCTGTGTCTGCCCAGCTGCACCGATACACCCAGCTGCGCACGGTGCCCAGCGCAGGGAGAACGAATgatcatctg--------------------tccaacgcgccca-ttttcgggtgaggaaactaagg-ctcCAACTC-----GATCAACGCACTCTTCTCTGTTGATTACCAGAAAAGTAGCAGGACAGGTGTCCGGTCCTGTCCCACGCTACCCCGGCCCATTAAGCCGGCACCCCGGCTTCTACCCCC--GGCTGTGCCCGGCG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68670990 1719 + 74645514 aa-------taaaaacaaac-tttgaTGCTTAAACAATTAAGCTTCATGcatct---------------------------ctttaatttttcttttattta---aactcTAATTTCATGACAGATTAAGCTTCATGAATCTCAAAAATGTGTAGAA-CCCTCACT-CCcagccttccctccct--ctctcttgtcCTTCTTTCTGATTTCTTGGAATCAGAAGGAAGATTCAGATATTCAGGAACCATCTCACAGGAGGCACCCATGTGACGTGTCCAACATCACT-CCACGCAGGTGTCCTTGGGTCCTGGGTGCCCAGGTTCCTGTGAATTGTGACCC-CAGGCAGAAGC-GTGAGCATCTTCAGAGGAACCCGCCCACCCAAAGCCAGGGAACAGCCAAGGCTGGCATCCTCAGGGTGGCTGTGTGCCAGGGCACCTCTGACTTGCGCTGAGTCAAATGGACAAAGCCCGCAATTCACCCATAACCCAGATTCTTGAGACCCCGCTTGACTTTGGGAATCCCAGGCATTAGGCTCGGGGCAGTGTCATCATGGC--------------------------GCTTGCTGGCCA-AGTCAGGACACAGCCTAAGC----CGGAATCTGC--------------------TGGTGCTGGTATAAGCGGTGAGTGGGCGTGTGGGTGGGGGTTGCGGTTAGGGTGTGGACATCCCAGAATCCA-GGACTCTGTTCAC---AATTCGTCCACactcc------------ctgctcccctcccttacagcccctccctccccaggcctcctgagcctctaacccccAGATAAGGAA--AGGGGTGGACTcggttggagtccagtggccgCTCCGGTCCAATCAACTCTACCTGGGGTGAGGGGAAGCTCCTCTGGCCGGGCTGCTCCC-------------------------------------------------------------------------------------------------------------------TCTGCAGGGCTGTGACTGG--------------------------------------------ACAGATTACTCAAGAAAGGAAGCAGGTGGGCCGGAACGAACCCGTGGTGCCACATAGGCCTCCGTTCTC----ATGCATATAAGTTTCCCACACTCAGGCAGGAAATGAAAATGCTTCTTGGACCCCCAAGGAGAAtaaaggagaggggaaggggaggaggattTTTCGGTGCTATTAATGACACTTTCAGCCTCC--TGTGCATTTTTGGGACGGCTGC---AGAAGGCAGTGCTGCGCCCCTACCCAGAACTAGCGAGTGCTTCCTGATTGGCCTCCCGCCTTCCTCTCGTC-CTCCAGGGCCTCCATTGGCAGCTGTGCAAGGGCCCGGCCCTGCCTCTGGCTCTCCACACTCGCTGTGATACCTCAGGCCTCCCAAGCCCCGCCACGCCCTTCCCTCTTTCGGGAACAG-CTGCCTTCCATCACCTTGGCTGCCTGGCTAATTCCTGCTCATTCCTTAAAGCCCTGTTTTGA------------------------TTT-----CTCCTCAATAAAACTC-TGACACCACCCTCCAGTCAGAATTAGTCACTACTTTCTCTGTACGTT-GGAAACACCGCTTTATCGTGGAGA----CTTTAAGGATCTTCAAGTAGAGAGACTCCTCCCGTGCAGGTTG----------TGCACGCTCTCACCACCGCGTGCGTTACCCGAGTTGTAAAGG-GCGGTTCTCTCTGTCTGCCCCGCTGCACCGATACACCCAGCTGCGCACGGTGCCCAGCGCAGGGAGAACGAATGATCATCTG--------------------TCCAACGCGCCCA-TTTTCgggtgaggaaactaagg-ctccaACTC-----GATCAACGCACTCTTCTCTGTTAATTACCAGAAAAGTAGCAGGACAGGTGTCCGGTCCTGTCCCGCCCTACCCTGGCCCATTAAGCCAGCACCCCGGCTCCGACCCCC--GGCTGTGGCCGGcg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30722274 1715 - 75148670 aa-------TAAAAACAAAA-TTTGATGCTTAAACAATTAAGCTTCATGCATCT---------------------------CTTTAATTTTTCTTTTATTTA---AACTCTAATTTCATGACAGATTAAGCTTCATGAATCTCAAAAATGTGTAGAA-CCCTCACT-CCCAGCCTTCCCTCCCT--CTCTCTTGTCCTTCTTTCTGATTTCTTGGAATCAGAAGGAAGATTCAGATATTCAGGAACCATCTCACAGGAGGCACCCATGTGACGTGTCCAACGTCACT-CCACGCAGGTGTCCTTGGGTCCTGGGTGCCCAGGTTCCTGTGAATTGTGACCC-CAGGCAGAAGC-GTGAGCATCTGCAGAGGAACCCGCCCACCCAAAGCCAGGGAACAGGCAAGGCTGGCAT-CTCAGGGTGGCTGTGTGCCAGGGCACCTCTGACTTGCGCTGAGTCAAATGGACAAAGCCCGCAATGCACCCATAACCCAGATTCTTGAGACCCCGCTTGACTTTGGGAATCCCAGGCATTAGGCTTGGGGCAGTGTCATCATGGC--------------------------GCTTGCTGGCCA-AGTCAGGACACAGCCTAAGC----CGGAATCTGC--------------------TGGTGCTGGTATAAGCGGTGAgtgggcgtgtgggtgggggttgcggttagggtgtggACATCCCAGAATCCA-GGACTCTGTTCAC---AATTCGTCCACACTCC------------CTGCTCCCCTCCCTTACAGCACCTCCCTCCCCAGGCCTCCTGAGTCTCTAACGCCCAGATAAGGAA--AGGGGTGGACTCAGTTGGAGTCCAGTGGCCGCTCCGGTCCAATCAACTCTACCTGGGGTGAGGGAAAGCTCTTCTGGCCGGGCTGCTCTC-------------------------------------------------------------------------------------------------------------------TCTGCAGGGCTGTGACTGG--------------------------------------------ACAGATTACTCAAGAAAGGAAGCAGGTGGGCCGGAACGAACCCATGGTGCCACATAGGCCTCCGTTCTC----ATGCATATAAGTTTCCCACACTCAGGCAGGAAATGAAAATGCTTCTTGGACCCCCAAGGAGAATAAAGGAGAGGGGAAGG---GGAGGATTTTTCGGTAGTATTAATGACACTTTCAGCCTCC--TGTGCATTTTTGGGACGGCTGC---AGAAGGCAGTGCTGCGCCCCTACCCAGAACTAGCGAGTGCTTCCCAATTGGCCTCCCGCCTTCCTCTCGTC-CTCTAGGGCCTCCATTGGCAGCTGTGCAAGGGCCTGGCCCTGCCTCTGTCtctccacactcgctgtgatacctcaggcctcccaagctccgccccgcccttccctctttcgggaacag-ctgccttccatcaccttggctgcctggctaattcctgctcattccttaaagccctgttttga------------------------ttt-----ctcctcaataaaactc-tgacaccaccctccagtcagaattagtcacttctttctctgtacGTT-GGAAACACCGCTTTATCGTGGAGA----CTTTAAGGATCTCCAGGTAGAGAGACTCCTCCCATGCAGGTTG----------TGCACCCTCTCACCACCGCGTGCGTTACCCGAGTTGTAAAGG-GCGGTTCCCTGTGTCTGCCCCGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGTAGAACAAATgatcatctg--------------------tccaacgcgccca-ttttcgggtgaggaaactaagg-ctcCAACTC-----AATCAACGCACTCTTCTCTGTTGATTACCAGAAAAGTAGCAGGACAGGTGTCCGGTCGTGTCCCGCCCTACCCTGGCCCATTAAGCCGGCACCCCGGCTCCGACCCCC--GGCTGTGCCCGGCG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126541610 1668 + 159171411 aa-------taaaaacaaaa-tttgatgcttaaacaattaagcttcaTACATACaaattttaaagtaaaaattaaaaaaaatttaaaattttCCTTTTTTAA---AACTCTAATTTCATGACAGATAAAACTTCATGCATCTC-AAAATGTATAGAACCCCTCATT-CCCAGCCTTCTCTCCCTCCCTCTCTCTTCCTTCTTTCTGATTTCTTGGAATTGGAAGGAAGATTCAGATATTCAGGAACCATCACACAGGAGGCACCCATGAGATGTGTCCAACATCACT-CCAGGCAGATGTCCTTGGGTCCTGGGTGCCCAGGTTCCTGTGAATTGTGACCC-CAGGCAGAAGC-ATGAGCGT-------GGAACCCAA--AGCCAGGCCCAGGGAACACCCAGGGCTGGCACCCTCAGGGCGGCTGTGCACCAGGGGACCTCTGACTT--GCTGAGTAAAATGCACAAAGCCAGCAATGCACCCATAACCCAGATTCTTGAGAGGCCGCTGGACTTTGGGAATCCCAGGCATTAGGCCCAGGGCAGGGTCATCCTGGC--------------------------GCTTGCTGGCCA-AGTGAGGACAGAGCCTGAGT----TGGAATCTGC--------------------TGGTGCTGGTACAAGGGGTGAGTGGGCGTGTGGGTGGGGGTTATGGTTAGGGCGTGGACATCCCAGAATGCA-GGACGCTGTTCAC---AATTCCTCCAGACTCC------------CTGCTCCTCTCCCTTACAGCACCTCCCTCCCGAGGCCTCCTGAGCCTCTAACCCCTAGATAAGGAA--ACGGGAGGGCT--------------TGTCCGCTTTGGTCCAATCAGCTCTACCTGGGGTGAGGGGAGGCTCCTTGGGCCGGGCAGCCACC-------------------------------------------------------------------------------------------------------------------TCTGCAG-GCCGTGGCTGG--------------------------------------------ACAGATTACTCAAGAAAGGAGGCAGGTGGGACGGAACGAACCCACGGTGCCACATGGGCCTGGGTTTTC----ATGCATTTAAGTTTCCCACACTCAGGCAGGAAATGAAAATGCTTCTTGGACCCCCACGGAGAGTACAGGAGAGGGGAAGGGGAGGAGGAGTTTTCGGTGCTGTTGATTACACTTTCAGCCTCC--TGTGCATTTTTGGGAGGGCTGCAGGAGAAGGCAGTGCTGCGCCCTTACCCAGAACTCCCAA-------CTAACTGGCCTCCTACCTTCCTCTCGTC-CTCTAGGGCCTCCATCGGCAGCTGTGCAAGG-----GCCCTGCCTCTGCCTCTCCTCGCTCGCTGTGATACCTCGGGCCTCCCAGGGTCCGCCACGCCCTTCCCTCTT-----AACAG-CTGCCTTCCATCACCTTGGCTG-----------CCTGCTAATTCCTTAAAACACTGTTTTGA------------------------TTT-----CGCCCCAGTAAAACTCTTGACACCACCCTGGAGTCAGAACTAGTCACTTCTTCCTCTGTACGTT-GGAAACGCCGCTTTATCGTGGAGC-TTTCTTGAAGCATATCGAAGTAGGGAGACTCCTTCCGAGAGAGTTT----------TGCATGTTCTCACCTCCGCGAGCGGTACCCGAGTTGTAAAGG-GCGGGTCCCTGTGTCTGCCCCGCTGCACCGAGACACCGAGCTGCACACGGTGCCCAGCGCA--------------------------------------------------CCCA-TTTACAGGCGAGGAAACCAAGG-CCCCAACTC------ATCGATGCACTCTGCCCTTCCGATTACCGGAAAAGTAGCAGGACGGGTGTCTGGTCCTGTCCCGCCCTGCCCTGGCCCACTAAGCCGGCGCCCCGGCTCCGACCCCC--GGCTGTGCCCGG-- i calJac3.chr5 C 0 C 0 s canFam3.chr9 57429769 1809 - 61074082 AA-------TGAAAATAAAATTTTTGTGCTTGAACAATTAACCCTCATGCATCT---------------------------------------------TGA---AAGTC----------ACACACTTAGC--CATACAGTGGAA-------TGGAA-CACTCGCTGCccttccctccctccctccctccctcctccttccttcTGAGTTCTGGGAAT-----------------------------------------GTTCCC--------CGTCCAATATCACTACAACACAGGTATTCCTGGTTCCTGGGTGCCCAGGTACGTGTGAATTATGACCCACAGGCAGAAACGGTGGGCACTGAGGGCGGGGCCAACC-------AACCAGAGAATACCCAA-----CCGTCCTCCCTGACTCCAGGCACAGGGGCATCTCTGACTTGAGCTAAATAAAATGAACAAAGCCAACGAT------------TAGCTTCCCGAGAGGCATCTGGGCTCTGGGAACCTCAGGCCTCAGTGTCGGGGGAGTGTCCT--------------------------------GCGTATGAGCCAGAATCAGAACAAAGCTTGACCAGAGTGAAATTTGCACAGGTGGCAATGAGGGGTGTTGTGCTAGTGCAAGTGGCGACT--GCGGGGGTGTGCGGGCT---------GTGCGGCCATCCCAGAATCTAGGGACTCTAGGGACGGTAATTCGTCTATACTCCCCAGGCCTGAGGCTGCCCCCCTCCCAT-CTTCACCCACCCTGCCCGGCCTC---AGCCTCCACTCCCTGGATAAGGAGCTGGAGGTGGGCCCAGACAGACTCCAGTGTCCACTCGGCCCC--TTGATTGGGACCTGGACATAGGGAAGGTCACCTGACTGCACAGAtttcttaaaatttttatttattcatgatagtcacacagagagagagagaggcagagacacaggcagagggagaagcaggctccatgcaccgggagcccgacgtcggactcgatcccgggtctccaggattgcgccctgggccaaaggcaggcactaaacctctgcaccacccagggttcccCACAGATTTCTTTAAAAGGGGAGCAGGTGGGAAGGACC-CACCCACTGAGCCACATGTACTTCAGTTCTCCTTGATACATACGAGCTTCCCGCTCTCTGGCAGGAAATAAAAATGCTTCCTGGG-CGCGGTGGGGAGTAAAGGAGAGGG--------GGACAGTGTTCTGGTGAAGCTGAGCATACTT----CCTCCTGTGTGCGGTTCTGGGGCTCGGGCAGGAGCAGGCAGGGTTGCGCCCTTACCAAGAATTTGC---------CTGGATCTCCTCCCCCTCAACTGTCTACACCCGGGGGCCTGGGCTGGCAAATCTGGAAGGG-CTGGCCCGG----TGTGTCTCCACGt-----------------gcctcc--ggctccgtcgcgcccttccccctgcctggaactgcccgcctccccaaaccctggccacctggcagattccttctcattctttaaaaccttgctttgaAAAAAAAAAACCAAAAAACCTTGCTTTGGCACCACCTTCATAAAACTC-TGGCATCACCCTCCGGACAAAATGCATCACTTTCTCCCCTGTACATTAAAAAAAACAGTTTTATTACGGAAAATTTCCTTGAGGATACAAAAGC----AGAATTCCTCTGTACAACTTTTGCCAGGGGATGCACGCTGTCGTCACCGCCTGTGTTACACGGGCCGGCAAGACGCCCGTCCCTGCGCCTGCTCTTCAG-------------AGCCACGCACGGCACCTGGCACATAGCGGATAAATGGGTCTCAGATGGAACagaaatgagccgctacaatgcgcccattttacagatgcggaaaccgaggcccCCAGCTCATCAGAGTCAATGCAGCCTACTCTTTTGACTACTAGACAGGTAGAGAGACAGGTACCC------GGCCCCCCCTGCCCTGGGCGACTAAGCCAGCGTCGC-GCTCCCTCCCCCGGGGTTGGTCCCTGTG i canFam3.chr9 I 1 C 0 e nomLeu3.chr14 3694494 2515 - 94967081 M a score=134986.000000 s hg38.chr17_GL383566v1_alt 71840 94 + 90219 CCGCCGCGGTGCCCGGCGCCGCCGCCTCGCCCGGCGGGGCCGCCCGGAGCGCCCGCACCTCCGCCCGCTTCCACCTGGCCGGGCCCGCCCCGCC s panTro4.chr17 76262056 76 + 82630442 ccgccgc------------------ctcgcccggcggggccgcccggagcgcccgcacctccgcccgcttccacctggccgggcccgccccgcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67356749 76 + 73212453 ccgccgc------------------ctcgcccggcggggccgcccggAGCGCCTGCACCTCCGCCCGCTTCCACCTggccgggcccgccccgcc i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 74667364 76 + 80997621 CCGCCGC------------------CTCGCCCGGCGGGGCCGCCCGGAGCGCCCGCACCTCCTCCCGCTTCCACCTGGCCCGGCCCGCCCCGCC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68672709 76 + 74645514 ccgccgc------------------ctcgcccggcggGGCTGCCCGGAGCGCCCGCACCTCCTCCCGCTTCCACCTGGCCCGGCCCGCCCCGCC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30723989 76 - 75148670 CCGCCGC------------------CTCGCCCGGCGGGGCCGCCCGGAGCGCCCGCACCTCCTCCCGCTTCCACCTGGCCCGGCCCGCCCCGCC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126543278 57 + 159171411 -------------------------------------GGCCGCCCCGAGCACCAGCACCTCCTCCGGCTTCCACCTGGCCAGGCCCGCCCCGCC i calJac3.chr5 C 0 C 0 s canFam3.chr9 57431578 73 - 61074082 CCACCGC------------------CTGCCTCCCCCCCACCAGCGCGCGCGCCCG---CTCCTCGCGCTTCCACCTCCTCCTCCTCCCCCCGCC i canFam3.chr9 C 0 I 1250 e nomLeu3.chr14 3694494 2515 - 94967081 M e rheMac3.chr16 74857344 390 + 80904711 M a score=166688.000000 s hg38.chr17_GL383566v1_alt 71934 93 + 90219 CGGACTCGGGACTGGGAAGTGCGGCGACTCCCGGAACCAGCCATTGGCGCCAGCGCGGGGAGCTGGGGGTGCAGAGCTGCGGGCGCGGCGGGC s panTro4.chr17 76262132 93 + 82630442 cagactcggGACTGGGAAGTGCGGCGACTCCCGGAACCAGCCATTGGCGCCAGCGCGGGGAGCTGGGGGTGCAGAGCTGCGGGCGCGGGGGGC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67356825 93 + 73212453 cggACTCGGGACTGGGAAGTGCGGCGGCTCCCGGAACCAGCCATTGGCGCCAGCGCGGGGAGCTGGGGGTGCAGAGCTGCGGGCACGGGGGGG i ponAbe2.chr17 C 0 I 288 s macFas5.chr16 74667440 93 + 80997621 CGGACTCGGGACTGGGAAGTGCGGCGACTCCCGGAACCAGCCATTGGCGCCAGCGCGGGGAGCGGGGGGTGCAGAGCTGAGGGCGCGAGGGGC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68672785 93 + 74645514 CGGACTCGGGACTGGGAAGTGCGGCGACTCCCGGAACCAGCCATTGGCGCCATCgcggggagcggggggtgcagagctgagggcgcggggggc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30724065 93 - 75148670 CAGACTCGGGACTGGGAAGTGCGGCGACTCCCGGAACCAGCCATTGGCGCCAGCGCGGAGAGCGGGGGGTGCAGAGCTGAGGGCGCGGGGGGC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126543335 93 + 159171411 CAGACTCGGTACTTGGAAGTGCAGCGATTCCCGGAACCAGCCATTGGCGCCAGCGCGGAAAGCTGGGTGTGCGGAGCTTCGAGCGCGCGGGGC i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3694494 2515 - 94967081 M e canFam3.chr9 57431651 1250 - 61074082 I e rheMac3.chr16 74857344 390 + 80904711 M a score=456586.000000 s hg38.chr17_GL383566v1_alt 72027 284 + 90219 CACGCAGGCGGCCCCCACCcccggcctggcctggtctggtctggtctgCGCTGCCGCGCGGGGGCGCCCCCTCCCAGGCCCGGCGCCCGCCAGCCCCGCTCCGCCAGGTGCAGCGCA-----GCGCAGGGGTGGGCGGGGG-TGGGGCTCGGCGCGCACGTTCACGGGGCGGGGAGGGGGCGGGTCAGGGGCGGGACCACAGCCGGCTGGGCCGGGGTTCTATGCGCATCTCCggggaggggcggggcgggggcggggccggggcggg-----------gccCGGTCGGTGCACTCCAGAC s panTro4.chr17 76262225 284 + 82630442 CACGCAGGCGGCCCCCACCCCCTGCctggcctggtctggtctggtctgCGCTGCCGCGCGGGGGCGCCCCCTCACAGGCCCGGCGCCCGCCAGCCCCGCTCCGCCAGGTGCAGCGCA-----GCGCAGGGGTGGGCGGGGG-TGGGGCTCGACGCGCACGTTCACGGGGCGGGAAGGGGGCGGGTCAGGGGCGGGACCACAGCCGGCTGGGCCGGGGTTCTATGCGCATCTCcggggaggggcggggctggggcggggccggggcggg-----------gccCGGTCGGTGCACTCCAGAC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67357206 291 + 73212453 CACGCGGGCGGCCCCCACCCCCGGCCTGGC----------CTGGTCTGCGCTgccgcgcgggggcgccccctcccaggcccggcgcccgccagccccgctccgccaggtgcagcgcagcgccgcgcaggggtgggcgggggccggggctcggcgcgcACGTTCATAGGGCGGGAAGGGGGCGGGTCAGGGGCGGGAACACAGCCGGCTGGGCCAGGGTTCTGTGCGCATCTTcggggaggggcggggctggggcggggctggggcggggcaggggcggagccgggTCGGTGCACTCCAGAC i ponAbe2.chr17 I 288 C 0 s macFas5.chr16 74667533 274 + 80997621 CACGCGGGCGGCCCCCACCCCCAGCCTGGC----------CTGATCTGCGCTGCCGCGCGGGGGCGCcccctcccaggcccggcgccacccagccccgctccgccAGGTGCAGCGCC-----GCGCAGGGGTGGGCGGGGG-CGGGGTTCGGCGCGCACCTTCAAGGGGCGGGGCAGGGGCGGTGTAGAGGCGGGACCACAGCCAACTGGGCCGGGGTTTTGTGCGCATCTCcggggaggggcggggatggggcggggccggggcggg-----------gccgggTCCGTGCACACCAGAC i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68672878 274 + 74645514 cacgcgggcggcccccacccccagcctacC----------CTGATCTGCGCTGCCGCGCGGGGGCGCCCCCTCCCAGGCCCGGCGCCACCCAGCCCCGCTCCGCCAGGTGCAgcgcc-----gcgcaggggtgggaggggg-cggggctcggcgcgcaccttcaaggggcggggcaggggcggtgtagaggcgggACCACAGCCAGCTGGGCCGGGGTTTTATGCGCATCTCCGAggaggggcggggctggggcggggctggggcggg-----------gccgggTCCGTGCACACCAGAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30724158 274 - 75148670 CACGCGGGCGGCCCCCACCCCGAGCCTGGC----------CTGATCTGCGCTGCCGCGCGGGGGCGCCCCCTCCCAGGTCCGGCGCCAGCTAGCCCCGCTCCGCCAGGTGCAGCGCC-----GCGCAGGGGTGGGCGGGGG-CGGGGCTCGGCGCGCACCTTCAAGGGGCGGGACAGGGGCGGTGTAGAGGCGGGACCACAGCCAGCTGGGCCGGGGTTCTATGCGCATCTCcgaggaggggcggggatggggcggggaaggggcggg-----------gcCTGGTCCGTGCACACCAGAC i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126543428 270 + 159171411 CACACGAGCGGCCCCCACCCGCGGCCCGGC----------CCGGTCTGCGCTGCCGCTCGGGGGCGCCCACTCCCAGGCCCGGCGCCTGCCAACCCCGCTCCGCCAGGTGCAGCGCC-----GCGCAgaggcgggcggggg-cggggctcggcgcgcacctttacggggcggggaaggggtggggccgaggcgggatcacagcaggctgggccggggttctgcgcgcacctccgaggaggggcggggctggggcggagccggggcggg-----------gctgg----gtgCTCTCGGGAC i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3694494 2515 - 94967081 M e canFam3.chr9 57431651 1250 - 61074082 I e rheMac3.chr16 74857344 390 + 80904711 M a score=901532.000000 s hg38.chr17_GL383566v1_alt 72311 366 + 90219 GGCGGGCCGCCCCCTCTTCCCGCCTTCCTACTACCGGCCCAGGATTAGCGCCCTGGGAGCGCGCGCCCCGCTGCCTCGCCGCCACACTTTCCTGGGAGCGGC-----------------------GGCCACGGAGGCACCATGAAGAAGTCTTACTCAGGTGGGCTTCGCGCCCGGGGTGGGGAGGGGTCGGTGTCCCGGGACCAGCGCTGCTCACCTGAGTGCCTGCGGCCGGGAGTGGCGAGGCGCCCCCGGAGCTGAGCGAGTCCCCGCGGCGGGCACACTGCAGGTCGAGTTCCTCCCAGGACAGGGCCGCTGTCGGGCCGCTTTCGACCTGAGCCGACCGTCCCCTGCGCTGTCTCCAGCCCTTGCTCGAGTGTCGGAGGGGCT s panTro4.chr17 76262509 389 + 82630442 GGCGGGCCGCCCCCTCCTCCCACCTTCCTACTACCGGCCCAGGATTAGCGCCCTGGGAGCGCGCGCCCCGCTGCCTCGCCGCCACACTTTCCTGGGAGCGGCCGCCACACTTTCCTGGGAGCGGCGGCCACGGCGGCACCATGAAGAAGTCTTACTCAGGTGGGCTTCGCGCCCGGGGTGGGGAGGGGTCGGTGTCCCGGGACCAGCGCTGCTCACCTGAGTGCCTGCGGCCGGGAGTGGCGAGGCGCCCCCGGAGCTGAGCGAGTCCCCGCGGCGGGCACACTGCAGGTCGAGTTCCTCCCAGGACAGGGCCGCTGTCGGGCCGCTTTCGACCTGAGCCGACCGTCCCCTGCGCTGTCTCCAGCCCTTGCTCGAGTGTCGGAGGGGCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67357497 366 + 73212453 GGCGGGCCGCCTCCTCCTCCCGCCTTCCTACTCCCGGCCCAGGATTAGCGCCCTGGGAGCGCGCGCCCCGCTGCTTCGCCGCCACAGTTTCCTGGGAGCGGC-----------------------GGCCACGGCGGCACCATGAAGAAGTCTTACTCAGGTGGGTTTCGCGCCCGGGGTGGGGAGGGGTCGGTGTCCCGGGACCAGCGCTGCTCACCTGAGCGCCTGCGGCCGGGAGTGGCGAGGCGCCCCTGGAGCTCAGCGAGTCCCCGCGGCGGGCACACTGCAGGTCGAGTTCCTCCCAGGACAGGGCCGCTGTCGGGCCGCTTTCGACCTTAGCAGACCGTCCCCTGCGCTGTCTTCAGCCCTTGCTCGAGTGTCGGAGGGGCT i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74857734 366 + 80904711 GGCGGGCCGCCCCCTCCTCCCTCCTTCCTACTCCCGGCCCGGGATTAGCGCCCTGGGAGCCCGCGCCCCGCGGCCTCGCCGCCACACTTTCCTGGGAGCGGC-----------------------GGCCACGGCGGCACCATGAAGAAGTCTTACTCAGGTGGGCTTCGCGCCCGGGGTGGGAAGGGGTCGGTGTCCCGGGACCAGCCCTGCTCACCTGAGCGCCTGCGGCCGGGAGTGGCGAGGCGCCCGCGGAGCTGAGCGAGTCCCCGCGGCGGGCACACCGCAGGTCGAATTTCTCCCAGGACAGGGCCGCTGTCGGGCCACTTTCGACCTGAGCCGAACGTCCCCTGCGCTGTCTCCAGCCCTCGCTCGAGTGTCTGAGGGGCT i rheMac3.chr16 M 390 C 0 s macFas5.chr16 74667807 366 + 80997621 GGCGGGCCGCCCCCTCCTCCCTCCTTCCTACTCCCGGCCCGGGATTAGCGCCCTGGGAGCCCGCGCCCCGCGGCCTCGCCGCCACACTTTCCTGGGAGCGGC-----------------------GGCCACGGCGGCACCATGAAGAAGTCTTACTCAGGTGGGCTTCGCGCCCGGGGTGGGAAGGGGTCGGTGTCCCGGGACCAGCCCTGCTCACCTGAGCGCCTGCGGCCGGGAGTGGCGAGGCGCCCGCGGAGCTGAGCGAGTCCCCGCGGCGGGCACACCGCAGGTCGAATTTCTCCCAGGACAGGGCCGCTGTCGGGCCACTTTCGACCTGAGCCGAACGTCCCCTGCGCTGTCTCCAGCCCTCGCTCGAGTGTCTGAGGGGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68673152 366 + 74645514 GGCGGgccgccccctcctccctccttcctactCCCGGCCCGGGATTAGCGCCCTGGGAGCCCGCGCCCCGCGGCCTCGCCGCCACACTTTCCTGGGAACGGC-----------------------GGCCACGGCGGCACCATGAAGAAGTCTTACTCAGGTGGGCTTCGCGCCCGGGGTGGGAAGGGGTCGGTGTCCCGGGACCAGCCCTGCTCACCTGAGCGCCTGCGGCCGGGAGTGGCGAGGCGCCCGCGGAGCTGAGCGAGTCCCCGCGGCGGGCACACCGCAGGTCGAATTTCTCCCAGGACAGGGCCGCTGTCGGGCCACTTTTGACCTGAGCCGAACGTCCCCTGCGCTGTCTCCAGCCCTCGCTCGAGTGTCTGAGGGGCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30724432 366 - 75148670 GGCGGGCCGCCCCCTCCTCCCTCCTTCCTACTCCCGGCCCGGGATTAGCGCCCTGGGAGCCCGCGCCCCGCGGCCTCGCCGCCACACTTTCCTGGGAGCGGC-----------------------GGCCACGGCGGCACCATGAAGAAGTCTTACTCAGGTGGGCTTCGCGCCCGGGGTGGGAAGGGGTCGGTGTCCCGGGACCAGCCCTGCTCACCTGAGCGCCTGCGGCCGGGAGTGGCGAGGCGCCCGCGGAGCTGAGCGAGTCCCCGCGGAGGGCACACCGCAGGTCGAATTTCTCCCAGGACAGGGCCGCTGTCGGGCCGCTTTCGACCTGAGCCGAACGTCCCCTGCGCTGTCTCCAGCCCTCGCTCGAGTGTCTGAGGGGCT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126543698 365 + 159171411 TGCGGGCCGCCCCCTCCTCCCTCCCTCCTACTCCTGGCCGGGGATTAGCGCCCTGGGAGCCCGCGCCCCGCGGCCTCGCTGCCACACTTGACTGGGAGCGGC-----------------------GGCCACGGCGGTACCATGAAGAAGTCGTACTCAGGTGGGCTTCGCGCCCTGCGTGGGGAGGGATTGGTGTCCCGGGACCAGCGCTGCTCACCTGAGCGCCTGCGGCC-GGAGTGGCGAGGCGCCCCCGGAGCTGAGCGGGTCCCCAGGGCGGCCACACAGCAGGTCGAGTTTCTCCCAGGACGGGGCCGCTGTCGGGCGGCTTTCGACCTGAGCCGAAGGTCCCCTGCGCTGTCTCCAGCCCTGGCTCGGGTGTGGGAGGGGCT i calJac3.chr5 C 0 C 0 e nomLeu3.chr14 3694494 2515 - 94967081 M e canFam3.chr9 57431651 1250 - 61074082 I a score=102889.000000 s hg38.chr17_GL383566v1_alt 72677 37 + 90219 GCCCTGGGGGACGCTCCCTCTTCCTCGCCCCTTGCAC-------- s panTro4.chr17 76262898 37 + 82630442 GCCCTGGGGGACGCTCCCTCTTCCTCGCCCCTTGCTC-------- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67357863 37 + 73212453 GCCCTGGGGGACGCTCCTTCCTCTTCGCACCTTGCAC-------- i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3697009 36 - 94967081 GCCCTGGGGG-CGCTCTCTCCTCCTCGCCCCTTGCAC-------- i nomLeu3.chr14 M 2515 C 0 s rheMac3.chr16 74858100 37 + 80904711 GCCCTGTGGGACGCTCCCTCCTCCTCGCCCCTTGTAC-------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74668173 37 + 80997621 GCCCTGTGGGACGCTCCCTCCTCCTCGCCCCTTGTAC-------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68673518 37 + 74645514 GCCCTGTGGGACGCTCCCTCCTCCTCGCCCCTTGTAC-------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30724798 37 - 75148670 GCCCTGTGGGACGCTCCCTCCTCCTCGCCCCTTGTAC-------- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126544063 45 + 159171411 GCCTGGGGGGACGCTCCCTCCTCCTCGCCCCTTGCACCCTCACAT i calJac3.chr5 C 0 C 0 e canFam3.chr9 57431651 1250 - 61074082 I a score=2179820.000000 s hg38.chr17_GL383566v1_alt 72714 731 + 90219 CCTCGCAGGAATCGCTGACTTTCCAGGT---CGGCCGGGTGCTTTGGGTCCCT-GTGCGTCTGTGTGGGTGAATGGGGTCGGGGCTAGGTGGAGGGGTGTCCTTGGGTTCAGCCTCTAGGGCTGGTGGTCCAGGCCGCAGCATCCTTTCTTCGGATTCTCT-TCGGTTTCTCCTCTACTTAGTGGGGCACGGGACGGCCTCCAGATGGGACCGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCACGTTTTGCG-CTCAGGACGCCGCCCGCG---GCTGACATCCTCACTCCACCCTAGCAGGGCCCGCCTTAAGTAGGCGAAGGGGGCCTGACTTGGGCCTCACCATGAGCCGGTTCAGGAGCTTTCATTTCATAAGAGGCTCCCGCTCTGGCACTCTGAAGTTCCATTTCACAGATGGGCACACCGAGGCCACAA--------GGGCAGGTTAAGAGAAATCCAGATCTTCATTATTTGTCTTTTCCTTCCT----TTTTTTTTT---CCTTTGTGGTTTTCTCCA------------AAGGATCCAGGCAGGCAGGATCCTTTGTCCTCCTCAGTCCTCAAATTATAAATAGCGTCTCCTCTT---CTAAATCTAGAAACCGTTTGTTTAATGTCCCTCCTTTAATTCATTCAGATAGAAAGGTACCTGCCAAGGATCCATGAATTAATTTTTATTGATAGGAGAACAGAATCATGGGCCTTAGTTGGAGGTGAAGGAGTCATCGGGG-----CCATCCCCCTGCCTTT s panTro4.chr17 76262935 733 + 82630442 CCTCGCAGGAATCGCTGACTTTCCAGGT---CGGCCGGGTGCTTTGGGTCCCT-GTGCGTCTGTGTGGGTGAATGGGGTCGGGGCTAGGTGGAGGGGTGTCCTTGGGTTCAGCCTCTAGGGCTGGTGGTCCAGGCCGCAGCATCCTTTCTTCGGATTCTCT-TCGGTTTCTCCTCTACTTAGTGGGGCACGGGACGGCCTCCAGATGGGACCGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCATGTTTTGCG-CTCAGGACGCCGCCCGCG---GCTGACATCGTCCCTCCACCCTAGCAGGGCCCGCCTTAAGCAGGCGGAGGGGGCCTGACTTGGGCCTCACCGTGAGCCGGTTCAGGAGCTTTCATTTCATAAGAGGCTCCCGCTCTGGCACTCTGAAGTTCCATTTCACAGATGGGCACACCGAGGCCACAA--------GGGCAGGTTAAGAGAAATCCAGATATTCATTCTTTGTCTTTTCCTTCCT----TTTTTTTTT-TTCCTTTGTGGTTTTCTCCA------------AAGGATCCAGGCAGGCAGGATCCTTTGTCCTCCTCAGTCCTCAAATTATAAATAGCGTCTCCTCTT---CTAAATCTAGAAACCGTTTGTTTAATGTCCCTCCTTTAATTCATTCGGATAGAAAGGTACCTGCCAAGGATCCGTGAATTAATTTTTATTGATAGGAGAACAGAATCATGGGCCTTAGTTGGAGGTGAAGGAGTCGTCGGGG-----CCATCCCCCTGCCTTT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67357900 725 + 73212453 CCTCGCAGGAATCGCTGACTTTCCAGGT---CGGCCGAGTGCTTTGGGTCCCT-GTGCGTCTGTGTGGGTGAATGGTGTCGGGGCTGGGTGGAGGGGTGTCCTTGGGTTCAGCGCCTAGGGCTGGTGATCCAGGCCGCAGCATCCTTTCTTCGGATTCTCT-TCGGTTTCTCCTCTACTTAGTGGGGCACGGGACGGCCTCCAGATGGGACCGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCATGTTTTGCG-CTCAGGACGCCGCCCGCG---GCTGACATCCTCACTCCACCCTAGCAGGGCCCGCCTTAAGCAGGCGGAGGGGGCCTGACTTGGGCCTCACCATGAGCCGGTTCAGGAGC-----CTTCATAAGAGGCTCCCGCTCTGGcactctgaagttccatttcacagatgggcacaccgaggccgcaa--------gggcaggttaagagaAATCCAGATCTTCATTCTTTGTCTTTTCCTTTCC----TTTTTTTTT--TCCTTTGTGGTTTTCTCCA------------AAGGATCCAGGCAGGCAGGATCCTTTGTCCTCCTCAGTCCTCAAATTATAAACAGCGTCTCCTCTT---CTAAATCTAGAAACCATCAGTTTAATGTCCCTCCTTTAATTCATTCGGATAGAAAGGTACCTGCCAAGGATCCATGAATTAATTTTTATTGATAGGAGAACAGAATCACGGGCCTTAGTTGGAGGTGAAGAG--CACCGGGG-----CCATCCCCCTGCCTTT i ponAbe2.chr17 C 0 I 732 s nomLeu3.chr14 3697045 728 - 94967081 CCTCGCAGGAATCGCTGACTTTCCAGGT---CGGCCGGGTGCTTTGGGTCCCT-GTGCGTCTGTGTGGGTGAATGGGGTGGGGGCTGGGTGGAGGGGTGTCCTTGGGTTCAGCCTGTAGGGCTGGTGATCCAGGACGCAGCATCCTTTCTTCGGATTCTCT-TCGGTTTCTTCTCTACTTAATGGGGCACGGGACGGCCTCCAGGTGGGATCGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCATGTTTTGCG-TTCAGGACGCCGTCCGCG---GCTGACATCCTCACTCCACCCTAGCAGGGTCCGCCTTAAGCAGGCGGAGGGGGCCTGACTTGGGCCTCACCATGAGCCGCTTCAGGAGC-----CTTCATAAGAGGCTCCCGCTCTGGCACTCTGAAGTTCCATTTCACAGATGGGCACACCGAGGCCGCAA--------GGGCAGGTTAAGAGAAATCCAGATCTTCAttctttgtcttttcctttcc----ctttttttttttcctttgtggttttctCCA------------AAGGATCCAGGCAGGCAGGATCCTTTGTCCTCCTCAGTCCTCAAACTATAAACAGCGTCACCTCTT---CTAAATCTAGAAACCGTCTGTTTAATGTTCCTCCTTTAATTCATTCGGATAG-AAGTTATCTGCCAAGGATCCATGAATTAATTTTTGTTAATAGGAGAACAGAATCATGGGCCTTAGTTGGAGGTGAAGGAGTCATCGGGG-----CCATCCCCCTGCCTTT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74858137 672 + 80904711 CCTCGCAGGAATCCCTGACTTTCCAGGT---CGGCCGGGTGCTTTGGGTCCCTGGTGCGTCTGTGTGGGTGGATGGGGTGGGGGCTGGGTGGAGGGGTGTTCTTGGGTTCAGCCTCCAGGGCTGGTGATCCAGGCCGCAGCATCCT------------------------------------TGGGGCACGGGACGGCCTCCAGATGGGACTGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCGTGTTTTGCG-CTCAGGA---CGCCCGCG---GCTGACATCCGCACTCCACCCTAGCAGGGCCCTCCTTAAGCAGGCGGAAGGGGCCTGACTTGGGCCTCACCATGAGCCGGTTCAGGAGT-----CTTCATAAGAGGCTCCCGCTCTGGCACTCTGAAGTTCCATTTCACAGATGGGCACACCGAGGCCGCAT--------GGGCAGGTTAAGGGAAATTCAGATCTTCATTCTTTGTCTTTTCCTTTCC----TTTTTTTTT-TTCCTTTGTGGTTTTCTCCA------------AAGGACCGAGGCAGGCAGGATCCTTTGTCCTCCTCAGTCCTCAAATTATAAACAGCGTCTCCTCTT---CTAACTCTAGAAACCCTCTGTTTAATGTTCCTCCTTTAATTCATTCGAATAGAAAGTTGTCTGCCAAGGACCCATGA-------------------AGGACAGAATCATGGGCCTTAGTTGGAGGTGAAGGAGTCATCGCGG-----CCATCCCCCTGCCTTT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74668210 671 + 80997621 CCTCGCAGGAATCCCTGACTTTCCAGGT---CGGCCGGGTGCTTTGGGTCCCTGGTGCGTCtgtgtgggtggatggggtgggggctgggtggaggggtgTTCTTGGGTTCAGCCTCCAGGGCTGGTGATCCAGGCCGCAGCATCCT------------------------------------TGGGGCACGGGACGGCCTCCAGATGGGACTGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCGTGTTTTGCG-CTCAGGA---CGCCCGCG---GCTGACATCCGCACTCCACCCTAGCAGGGCCCTCCTTAAGCAGGCGGAAGGGGCCTGACTTGGGCCTCACCATGAGCCGGTTCAGGAGT-----CTTCATAAGAGGCTTCCGCTCTGGCACTCTGAAGTTCCATTTCACAGATGGGCACACCGAGGCCGCAT--------GGGCAGGTTAAGGGAAATTCAGATCTTCAttctttgtcttttcctttcc-----tttttttt-ttcctttGTGGTTTTCTCCA------------AAGGACCGAGGCAGGCAGGATCCTTTGTCCTCCTCAGTCCTCAAATTATAAACAGCGTCTCCTCTT---CTAACTCTAGAAACCCTCTGTTTAATGTTCCTCCTTTAATTCATTCGAATAGAAAGTTGTCTGCCAAGGACCCATGA-------------------AGGACAGAATCAGGGGCCTTAGTTGGAGGTGAAGGAGTCATCGCGG-----CCATCCCCCTGCCTTT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68673555 676 + 74645514 CCTCGCAGGAATCCCTGACTTTCCAGGT---CGGCCgggtgctttgggtccctggtgcgtctgtgtgggtggatggggtgggggctgggtggaggggtgttcttgggtTCAGCCTCCAGGGCTGGTGATCCAGGCCGCAGCATCCT------------------------------------TGGGGCACGGGACGGCCTCCAGATGGGACTGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCGTGTTTTGCG-CTCAGGA---CGCCCGCG---GCTGACATCCGCACTCCACCCTAGCAGGGCCCGCCTTAAGCAGGCGGAGGGGGCCTCACTTGGGCCTCACCATGAGCCGGTTCAGGAGC-----CTTCATAAGAGGCTCCCGCTCTGGCACTCTGAagttccatttcacagatgggcaCACCGAGGCCGCAT--------GGGCAGGTTAAGGGAAATTCAGATcttcattctttgtcttttcctttccctttttttttttt-ttcctttgtggttttCTCCA------------AAGGACCGAGGCAGGCAGGATCCTTTGTCCTCCTCAGTCCTCAAATTATAAACAGCGTCTCCTCTT---CTAACTCTAGAAACCCTCTGTTTAATGTTCCTCCTTTAATTCATTCGAATAGAAAGTTGTCTGCCAAGGACCTATGA-------------------AGGACAGAATCATGGGCCTTAGTTGGAGGTGAAGGAGTCATCGCGG-----CCATCCCCCTGCCTTT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30724835 708 - 75148670 CCTCGCAGGAATCCCTGACTTTCCAGGT---CGGCCGGGTGCTTTGGGTCCCTAATGCGTCTGTGTGGGTGGATGGGGTGGGGGCTGCGTAGAGGGGTGTTCTTGGGTTCAGCCTCCAGGGCTGGTGATCCAGGCCGCAGCATCCTTTCTTCGGATTCTCT-CCGGTTTCTCCTCTACCCAGTGGGGCACGGGACGGCCTCCAGATGGGACTGTCCAGCAGCGCCCAAACTTGGCGACTCGGGTTCGTGTTTTGAG-CTCAGGATGCCGCCCGCG---GCTGACATCCGCACTCCACCCTAGCAGGGCCCGCCTTAAGCAGGCGGAGGGGGCCTGACTTGGGCCTCACCATGAGCCGGTTCAGGAGC-----CTTCATAAGAGGCTCCCGCTCTGGCACTCTGCAGTTccatttcacagatgggcacactgaggccgcat--------gggcaggttaagGGAAATCCAGATCttcattctttgtctcttcctttcc------ttttttt-ttcctttGTGGTTTTCTCCA------------AAGGACCGAGGCAGGCAGGATTCTTTGTCCTCCTCAGTCCTCAAATTATAAACAGCGTCTCCTCTT---CTAACTCTAGAAACCCTCTGTTTAATGTTCCTCCTTTAATTCATTCGAATAGAAAGTTGTCTGCCAAGGACCCATGA-------------------AGGACAGAATCATGGGCCTTAGTTGGAGGTGAAGGAGTCATCGCGG-----CCATCCCCCTGCCTTT i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126544108 712 + 159171411 CCTCGCAGGAATCGCTGACTTTCCAGTC---CGGCCGGGTGCTTTGGGTCCCT-GTGCGTCTGTGTGGGTGGATGGGGTGGGGGCTGGGTGAAGGGCTGTCCTTGGGTTTAGCCTGCAGGGCTGGTGATCCACGCCGCAGTACCTTTTCTTCGAATTCTCT-CTGTTTTCTCCAATGCGCAGTGGGGCACGGGATGGCCTCCAAATGGGACCGTCCAGCAGTGCCCAAACTTGGCGACTGGGGTTCATGTTTTGGG-CTCAGGACGCCGCCAGCG---GCTGACATCCTCACTCCACCCAAGCAGGGCCCGCCTTAAGCAGGCGGAGGGGGCCTGACTTGGGCCTCACCATAAGCCGGTTCAGGAGC-----CTTCATGAGAAACTCCCCCTCTggtactctgaagttccatttcacagatgggcacaccgaggccgcaa--------gggcaggttaagGGCAATCCAGATCTTCATTCTTTGTCTT-----------------------TTCCTTTGTGGTTTCCTCCG------------AAGGATCCAGGCAGGCAGGACCCTTTGTCCTCCTCAGTCCTTAAGTTATAAACAGCGGCTCCTCTTCTGCTAACTCTAGAAACCTACTGTTTCAGGTTCCTCCTTTAATTCATTTGGATACAAAGTTATCTGCCAAGGACCCGTGAATTAGTTTTTAGTGATAG-GGGACAGAATCAAAGGCCTTAGCTGGAGGTGAAGAAGTCATTGTGG-----CCATCCCCCTGCCCCT i calJac3.chr5 C 0 C 0 s canFam3.chr9 57432901 665 - 61074082 cctcacaggg-----tgcctcgccgggtgcctcgccgggtgccGCCGTCCGCG-GTGCGCGCGCGTGTGCGTGTTG-GCGGGGGC------GGGGGGCG-CCCTGGGGTCAGCCTCC-GGGCTGGTGGTCGGGGCCGCAGCATCCT--CTCCGGATGCACTGTTAGTTACTCCTCTACGCCGTGGAG--------------CAAATGGGACCATCCAGCAAGGCCCGGGCTTGGTACCACGGGTCCACCCCGCGGGTCTCAGAGCCCCCGCCCCGTGTGCTGGCAGCCTGACTCCGC---GGCAGGTGTGCCCTCACGCAGGTGGGGGAGGCTCC-------------------CTGGTTCGGG--------TT-----------------------GCTCTGAGGTCCCACTTCACAGATGGGCAAAC--AAGCCACAAGCATGGAGGGGCAAG-CAAGGGTCATCCAGACCTCTGTCCTTTCTTTTTTT----------TTCTTCTTT-TCCCTTTGTGGGTACCCCCACCCCCACCCCCCAAGGCTC----CAGGCAGGATCCAGGGTCCTCCTCAGTTCTCAAATAATAACTGGCTTCTTCTCTTTTGCTCACCTTGCAAACTGTGC--------TCTTTCCCTTAATCTATTTGGACATGAAGTTTTCTGCCAAGGACTCATGAACTGATTTTTGCTGATAAGAGGACAACATCATGGGACTTAGTCGGAGCTGAAGAGGCCATTCCCGCCCCCCCCCCCCCCTGTCTTT i canFam3.chr9 I 1250 C 0 a score=3929890.000000 s hg38.chr17_GL383566v1_alt 73445 1199 + 90219 GGGCCATTG-TCGGTTTCCTCTGGCTTTCCATATTTAGGAACCAAAATGAGTGATAAAG--TACCTTGTCTCAAAGAGGATTACTCAGAACTTCCCCGAAAATACCCTTCTGGGTCAGTAGCTTAGAATTTCAACTTTCACCCGGTTGTTGCGAACAAGATGGCCCTCTACGCACCCGGAG------CACAGCTCTGTC--AGGAGCgtgggtgggttggtgtgctggtgg-gcgggAGCGGGCTTCCAGGTGGCACATGCTTGGTTTTGGCACCGGG----GCTTCCTCCCCAACATGCTCCAAATACTTGAGATTGTTGTGGGGATCGCGCGGTGCATGGCCCTTTCCAGGGGATCTCTAGCCCGCCCAGGGAGGGCCCTTTGCCCTTGGTTTCTTACACTTTACCTCCCACTGGTGGGTCCAGACAGTGGGGGTGACCGGGGTCCTCCCAGGTCGTGGGTCCTGGGTTTTTTCTGCGGAGAC--------CCTCCTGCACAGATGCCGGAAGGGCCCTGAGGCAGGCTTGGAGTCTCTGCACCTGCGGCTTACTGGGAGGTGGGGAGACCATCACTTGTCCTTTTCTCCTCTCCTCCACACACACCTACCCCACCCCTCACTG-----GGtttcttttttttttttt--------tttttAAAAAAAAGGACAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTGTGGAGTGAGCAGGAACCAACTCTTGTACA-GCAGCC----TCGGTGCCTCCTTGTGTTTACCTAAAGGGGCAGGCCCCTCTGAGGATGGGGGAAGGGAGGGCTCAGACCATTTCTGGTTTGCTCCCTGCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGTGTTGCAGTTGTATGGAGTGGGACTGGA-GGGGGCTGAT---GGTGGGGGTGGCCTCTTGCCCTCATTCTGAGTGTCCTGGAGCTGTCTTGG--CACCAGCCCTTT------TCCGGGTACGGGCAC-TCGCAGGAGTCAGGCTGACCCCCCAACAAGCCATCGACACCATGAAATTAAGGAAAGCAGCAAAAGATGTTAAAAATCCCCCAAGGCTCTGACAATCCAAGGACAACAGGAAGGTCTTTATTTTTTCATCTAGACTGTGCGGGATTATTGCTTCCAGACCTGTATGTGGGCTTCAGAATAAACGGAATGACCATAATGTTGTTCCCGGTAGACCTGGTTT-GAACATTCGTGAGCCTCTGAAAAGGAG---------------------------AAAGATTTTA s panTro4.chr17 76263668 1192 + 82630442 GGGCCATTG-TCGGTTTCCTCTGGCTTTCCATATTTAGGAACCAAAATGAGTGATAAAG--TACCTTGTCTCAAAGAGGATTACTCAGAACTTCCCCGAAAATACCCTTCTGGGTCAGTAGCTTAGAATTTCAACTTTCACCCGGTTGTTGCGAACAAGATGGCCCTCTACGCACCCGGAG------CACAGCTCTGTC--AGGAGCGTGGGTGGGTTGGTGTGCTGGTGG-GCGGGAGCGGGCTTCCAGGTGGCACATGCTTGGATTTGGCACCGGG----GCTTCCTCCCCAACATGCTCCAAATACTTGAGATTGTTGTGGGGATCGCGCGGTGCATGGCCCTTTCCAGGGGATCTCTAGCCCGCCCAGGGAGGGCCCTTTGCCCTTGGTTTCTTACACTTTACCTCCCACTGGTGGGTCCAGACAGTGGGGGTGACCGGGGTCCTCCCAGGTCGTGGGTCCTGGGTTTTTTCTGCGGAGAC--------CCTCCTGCACAGATGCCGGAAGGGCCCTGAGGCAGGCTTGGAGTCTCTGCACCTGCGGCTTATTGGGAGGTGGGGAGACCATCACTTGTCCTTTTCTCCTCTCCTCCACACACACCTACCCCACCCCTCACTG-----GGTTTCTTTTTTTTTTTTT--------------AAAAAAAGGACAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTGTGGGGTGAGCAGGAACCAACTCTTGTAAA-GCAGCC----TGGGTGCCTCCTTGTGTTTACCTAAAGGGGCAGGCCCCTCTGAGGATGGGGGAAGGGAGGGCTCAGACCATTTCTGGTTTGCTCCCTGCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGTGTTGCAGTTGTATGGAGTGGGACTGGA-GGGGGCTGAT---GGTGGGGGTGGCCTCTTGCCCTCATTCTGAGTTTCCTGGAGCTCTCTTGG--CACCAGCCCTTT------TCCAGGTACGGGCAC-TTGCAGGAGTCAGGCTGACCCCTCAACA-GCCATCGACACCATGAAATTAAGGAAAGCAGCAAAAGATGTTAAAAATCCCCCTAGGCTCTGACAATCCAAGGACAACAGGAAGGTTTTTATTTTTTCATCTAGACTGAGCGGGATTATTGCTTCTAGACCTGTATATGGGCTTCAGAATAAATGGAATGACCATAATGTTGTTCCCGGTAGACCTGGTTT-GAACATTCGTGAGCCTCTGAAAAGGAG---------------------------AAAGATTTTA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67359357 1200 + 73212453 GGGCCATTG-TCGGTTTCCTCTGGCTTTCCATATTTAGGAACCAAAATGAGTGATAAAGAATACCTTGTCTCTAAGAGGATTACTCAGAACTTCCCCAGAAATACCCTTCTGGGTCAGTAGCTTAGAATTTCAACTTTCACCCTGTTGTTGCAAACAACATGGCCCTCTACACACCCCGAG------CACAGCCCTGTC--AGGAGCGTGGGTGGGTTGGTGTGCTGGTGG-GCGGGAGCGGGCTTCCAGGTGGCACATGCTTGGTTTTGGCACCGGG----GCTTCCTCCCCAACATGCTCCAAATACTTGAGATGGTTGTGGGGATCGCGCGGTGCACGGCCCTTTCCCGGGGATCTCTAGCCCGCCCAGGGAGGGCCCTTTGCCCTTGGTTTCTTACACTTTACCTCCCACTGGTGGGTCCAGACAGTGGGGGTGACCGGGGTCCTCCCAGGTTGTGGGTCCTGGGTTTTTTCTGCGGAGAC--------CCTCCTGCACAGATGCCGGAAGGGCCCTGAAGCAGGCTTGGAGTCTCTGCGCCT---GCTTATTGGGAGGTGGGGAGACAATCACTTGTCCTTTTCTCCTCTCTTC----CACACCTACCCCATCCCTCACTG-----GGtttcttttttttttttt------ttttttttAAAAAAAGGACAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTGTGAGGTGAGCAGGAACCAACTCTTGTAAA-GCAGCCTCGGTGGGTGGCTCCTTGTGTTTACCTAAAGGGGCGGGGCCCTCTGAGGATGGGGGAAGGGAGGGCTCAGACCATTTCTGGTTTGCTCCCTGCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGTGTTGCAGTTGTATGGGGTGGGACTGGAGGGGGGCTGAT---GGTGGGGGTGGCCTCTTGCCCTCATTCTGAGTGTCCTGGAGCTCTCTTGG--CACCAGCCCTTT------TCCAGGTACGGGCAC-TTGCAGGAGTCAGGCTGACCCCTCAGCA-GCCATGGACACCATGACATTAAGGAAAGCAGCAAAAGATGTTAAAAATCCCCCTAGGCTCTGACAATCCAAGGACAACAGGAAGGTTTTTATTTTTGCATCTAGACTGAGCGGGATTATTGCTTCTAGACCTGTATATGGGCTTCAGAATAAACAGAATGACCATAATGTTGTTCCCTGTAGACCTGGTTT-GAACATTCGTGAGCCTCTGAAAAGGAG---------------------------GAAGATTTTA i ponAbe2.chr17 I 732 C 0 s nomLeu3.chr14 3697773 1202 - 94967081 GGGTCATTG-TCGGTTTCCTCTGGCCTTCCATATTTAGGAACCAAAATGAGTGATAAAGAATACCTTGTCTCAA--AGGATTACTCAGAACTTCCCCGAAAATACCCTTCTGGGTCAGTAGCTTAGAATTGCAACTTTCACCCGGTTGTTGCGAACAACATGGCCCTCTACACACACCGAG------CACAGCTCTGTC--AGGAGCgtgggtgggttggtgtgctggtgg-gcgggAGCGGGCTTCCAGGTGGCACATGCTTGATTTTGGCACCGGG----GCTTCCTCCCCAACATGCTCCAAATACTTGAGATGGTTGTGGGGATCGCGCGGTGCACGGCCCTTTCCTGGGGATCTGTAGCCCGCCCAGGGAGGGCCCTTTGCCCTTGGTTTCTTACACTTTACCTCCCACTGGTGGTTCCAGACAGTGGGGGTGACCAGGGTCCTCCCAGGTCGTGGCTCCTGGGCTTTTTCTGCGGAGAC--------CCTCCTGCACAGATGCCGGAAGGGCCCTGAAGCAGGCTTGGAGTCTCTGCACCTGCGGCTTATTTGGAGGTGGGGAGACCATCACTTGTCCGTTTCTCCTCTCTTC----CACACCTACCCCACCCCTCACTG-----GGtttctttttctttttttctttttttttttttAAAAAAAGGACAGAACCTTTTACAGTAGGTGGAAGTAGCGTTTGTGGGGTGAGCAGGAACCAATTCTTGTAAA-GCAGCC----TCGGTGGCTCCTTGTGTTTACGTAAAGGGGCGGGCCCCTCTGAGCGTGGGGGAAGGGAGGGCTCAGACCATTTCTGGTTTGCTCCGTGCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGTGTTGCAGTTGTATGGGGTCGGACTGGA-GGGGGCTGAT---GGTGGGGGTGGCCTCTTGCCCTCATTCTGAGTGTCCTGGAGTTCTCTTGG--TACCAGCCCTTT------TCCAGGTAGGGGCAC-TTGCAGGAGTCAGGCTGACCCCTCAACA-GCCGTCGACGCCATGAAATTAAGGAAAGCAGCAAAAGATGTTAAAAATCCCCCTAGGCGCTGATAATCCAAGGACAACAGGAAGATTTTTATTTTTTCTTCTAGATTGAGCGGGATTATTGCTTCTGGACCTGTATATGGGCCTCAGAATAAATGGAATGACCATGATGTTGTTCCTGGTAGAGCTGGTTT-GAACACTCGTGAGCCTCTGAAAAGGAG---------------------------AAAGATTTTA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74858809 1179 + 80904711 GGGCCATTG-TCGGTTTCCTCTGGCTTTCCATATTTAGGAACC-AAATGAGTGATAAAGAATACCTTGTCTCAAAGAGGATTACGAAGAACTTCCCCGAAAATTCCCTTCTGGGTCAGTAGCTTAGAATTTCAACTTTCACCCGGTTGTTGCAAACAACATGGCCCTCTCCACACCCCAGG------CACAGCTCTGTC--AGGAGCGTGGGTGGGTTGGTGTGCTGGTGG-GTGGGAGCGGGCTTCCAGGTGGCACATGCTTGGTTTTGGCACTGGG----GCTTCCTCCCTAACATGCTCCAAATACTTGAGATGGTTGTGGGGATCGCGCGGTGCACGGCCCTTTCCTGGGGATCTCTAGCCCGCCTAGGGAGGGTCCGTTGCCCTTGGTTTCTTACACTTCATCTCCCACTGGTGGGTCCAGACAGTGGGGGTGACCAGGGTCCTCCCAGGTCGTGGGTCCTGGGCTTTTTCTGCGGAGAC--------CCTCCTGCACAGATGCCGGAAGGACCCTGAAGCAGGCTTGGAGTCTCTGCACCTGCGGCTTATTTGGAGACTGGGAGACCATCACTTGTCCCTTTCTCCTCTCTTC----CACACCTACGCCACCTCTCACTG-----GGTTTCTTTTTTT---------------------AAAAAAGGACAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTGTGGGGGGAGCAGGAACCAGCTCTTGTAAA-GCAGCC----TCGGTGGCTCCTTGTGTTTACCTAAAGGGGCGGGCCCCTCTGAGGATGGGGGAAGGGAGGACTCAGACCATTTCTGGTTTGCTCCCTGCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGTGTTGCAGTCGTATGGGGTCAGACTGGT-GGGGGCTGAT---GGTGAAGGTGGCCTCTTGCCCTCATTCTGAGTGTCCTGGAGCTCTCTTGG--TAGCAGCTCTGT------TCCAGGTAGGGGCGC-TTGCAGGAGTCAGGCTGACCCCTCAACA-GCCGTCAACACCATGAAATTAAGGAAAGCAGCAAAAGATGTTGAAAATCTTCCTAGTCTCTGACAATCCAAGGACAACAGGAAGGTTTTTATTTTTTCATCTAGATTGAGCGGGATTATTGCTTCTGGACCTGTATATGGGCTTCAGAATAAACTGAATGACCATAA---TGTTCCTGGTAGAGCTGGTTT-GAACACTCACGAGCCTCTGAAAAGGAA---------------------------AAATATTTTA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74668881 1179 + 80997621 GGGCCATTG-TCGGTTTCCTCTGGCTTTCCATATTTAGGAACC-AAATGAGTGATAAAGAATACCTTGTCTCAAAGAGGATTACGAAGAACTTCCCCGAAAATTCCCTTCTGGGTCAGTAGCTTAGAATTTCAACTTTCACCCGGTTGTTGCAAACAACATGGCCCTCTCCACACCCCAGG------CACAGCTCTGTC--AGGAGCgtgggtgggttggtgtgctggtgg-gcgggAGCGGGCTTCCAGGTGGCACATGCTTGGTTTTGGCACTGGG----GCTTCCTCCCTAACATGCTCCAAATACTTGAGATGGTTGTGGGGATCGCGCGGTGCACGGCCCTTTCCTGGGGATCTCTAGCCCGCCTAGGGAGGGTCCGTTGCCCTTGGTTTCTTACACTTCATCTCCCACTGGTGGGTCCAGACAGTGGGGGTGACCAGGGTCCTCCCAGGTCGTGGGTCCTGGGCTTTTTCTGCGGAGAC--------CCTCCTGCACAGATGCCGGAAGGACCCTGAAGCAGGCTTGGAGTCTCTGCACCTGCGGCTTATTTGGAGACGGGGAGACCATCACTTGTCCCTTTCTCCTCTCTTC----CACACCTACGCCACCTCTCACTG-----GGTTTCTTTTTTT---------------------AAAAAAGGACAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTGTGGGGGGAGCAGGAACCAGCTCTTGTAAA-GCAGCC----TCGGTGGCTCCTTGTGTTTACCTAAAGGGGCGGGCCCCTCTGAGGATGGGGGAAGGGAGGACTCAGACCATTTCTGGTTTGCTCCCTGCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGTGTTGCAGTCGTATGGGGTCAGACTGGT-GGGGGCTGAT---GGTGAAGGTGGCCTCTTGCCCTCATTCTGAGTGTCCTGGAGCTCTCTTGG--TAGCAGCTCTGT------TCCAGGTAGGGGCGC-TTGCAGGAGTCAGGCTGACCCCTCAACA-GCCGTCAACACCATGAAATTAAGGAAAGCAGCAAAAGATGTTGAAAATCTTCCTAGTCTCTGACAATCCAAGGACAACAGGAAGGTTTTTATTTTTTCATCTAGATTGAGCGGGATTATTGCTTCTGGACCTGTATATGGGCTTCAGAATAAACTGAATGACCATAA---TGTTCCTGGTAGAGCTGGTTT-GAACACTCACGAGCCTCTGAAAAGGAA---------------------------AAATATTTTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68674231 1185 + 74645514 GGGCCATTG-TCGGTTTCCTCTGGCTTTCCATATTTAGGAACC-AAATGAGTGATAAAGAATACCTTGTCTCAAAGAGGATTACGAAGAACTTCCCCGAAAATTCCCTTCTGGGTCAGTAGCTTAGAATTTCAACTTTCACCCGGTTGTTGCAAACAACATGGCCCTCTCCACACCCCAGG------CACAGCTCTGTC--AGGAGCGTGGGTGGGTTGGTGTGCTGGTGG-GCGGGAGCGGGCTTCCAGGTGGCACATGCTTGGTTTTGGCACTGGG----GCTTCCTCCCTAACATGCTCCAAATACTTGAGATGGTTGTGGGGATCGCGCGGTGCACGGCCCTTTCCTGGGGATCTCTAGCCCGCCTAGGGAGGGCCCTTTGCCCTTGGTTTCTTACACTTCATCTCCCACTGGTGGGTCCAGACAGTGGGGGTGACCAGGGTCCTCCCAGGTcgtgggtcctgggctttttctgcgGAGACCCT-----CCTCCTGCACAGATGCCGGAAGGACCCTGAAGCAGGCTTGGAGTCTCTGCACCTGCGGCTTATTTGGAGACGGGGAGACCATCACTtgtccctttctcctctcttc----cacACCTACGCCACCTCTcactg-----ggtttcttttttt---------------------ataaaaggaCAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTGTCGGGGGAGCAGGAACCAGCTCTTGTAAA-GCAGCC----TCGGTGGCTCCTTGTGTTTACCTAAAGGGGCGGGCCCCTCTgaggatgggggaagggaggacTCAGACCATTTCTGGTTTGCTCCCTGCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGTGTTGCAGTCGTATGGGGTCAGACTGGT-GGGGGCTGAT---GGTGAAGGTGGCCTCTTGCCCTCATTCTGAGTGTCCTGGAGCTCTCTTGG--TAGCAGCCCTGT------TCCAGGTAGGGGCAC-TTGCAGGAGTCAGGCTGACCCCTCAACA-GCCGTCAACACCATGAAATTAAGGAAAGCAGCAAAAGATGTTGAAAATCTTCCTAGGCTCTGACAATCCAAGGACAACaggaaggtttttattttttcatctagaTTGAGCGGGATTATTACTTCTGGACCTGTATATGGGCTTCAGAATAAACTGAATGACCATAATGTTGTTCCTGGTAGAGCTGGTTT-GAACACTCACGAGcctctgaaaaggaa---------------------------aaatatttta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30725543 1190 - 75148670 GGGCCATTG-TCGGTTTCCTCTGGCTTTCCATATTTAGGAACC-AAATGAGTGATAAAGAATACCTTGTCTCAAAGAGGATTACGAAGAACTTCCCCGAAAATTCCCTTCTGGGTCAGTAGCTTAGAATTTCAACTTTCACCCGGTCGTTGCAAACAACATGGGCCTCTCCACACCCCAAG------CACAGCTCTGTC--AGGAGCgtgggtgggttggtgtgctggtgg-gcgggAGCGGGCTTCCAGGTGGCACATGCTTGGTTTTGGCACTGGG----GCTTCCTCCCTAACATGCTCCAAATACTTGAGATGGTTGTGGGGATCGCGCGGTGCACGGCCCTTTCCTGGGGATCTCTAGCCCGCCTAGGGAGGGCCCTTTGCCCTTGGTTTCTTACACTTCATCTCCCACTGGTGGGTCCAGACAGTGGGGGTGACCAGGGTCCTCCCAGGTCGTGGGTCCTGGGCTTTTTCTGCGGAGACCCT-----CCTCCTGCACAGATGCCGGAAGGACCCTGAAGCAGGCTTGGAGTCTCTGCACCTGCGGCTTATTTGGAGACGGGGAGACCATCACTTGTCCCTTTCTCCTCTCTTC----CACCCCTACGCCACCCCTCACTG-----GGTTTCTTTTTTT--------------------AAAAAAAGGACAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTGTGGGGGGAGCAGGAACCAGCTCTTGTAAA-GCAGCC----TCGGTGGCTCCTTGTGTTTACCGAAAGGGGCGGGCCCCTCTGAGGATGGGGGAAGGGAGGACTCAGACCATTTCTGGTTTGCTCCCTGCTTGGCAGTGGCCCAAGGTGTGCTGGGTGGGTCACTGTGTTGCTGTCGTATGGGGTCAGACTGGT-GGGGGCTGAT---GGTGAAGGTGGCCTCTTGCCCTCATTCTGAGTGTCCTGGAGCTCTCTTGG--TGGCAGCCCTGT------TCCAGGTAGGGGCAC-TTGCAGGAGTCAGGCTGACCCCTCAACA-GCCGTCAACACCATGAAATTAAGGAAAGCAGCAAGAGATGTTGAAAATCTTCCTAGGCTCTGACAATCCAAGGACAACAGGAAGGTTTTTATTTTTTCAGCTAGATTGAGCGGGATTATTGCTTCTGGACCTGTATATGGGCTTCAGAATAAACTGAATGACCATAATGTTGTTCCTGGTAGAGCTGGTTT-GAACACTCATGAGCCTCTGAAAAGGAG---------------------------AAAGATTTTA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126544820 1195 + 159171411 GGGCCGTTG-TTGGTTGCCTCTGGTTTTCCATGTTTCGGAAGCAAAATGAGTAATAAAGAATACCTTGTTTCAGAGAGGATTACTCAGAACTTCCCCGAAAATACCCTTCTGGGTCAGTAGCTTAGAATGTCAGCTTTCACCTGGTTGTTGTGAACAACATGGCCCTTGACACACCCCGAG------CACAGCTCTGTC--GGGAGCGTGGGTGGGTTGGTGTGCTGGTGG-GTGGGAGGGGGCTTCCAGGTGGCACATGCTTGGTTTTGGCACTGGG----GCTTCCTCCCCAACATGCTCCAAATGCTTGAGATGGTTGTGGGCATCGCGCCACGCACAGCCCGTTCCTGGGGATCTCTAGCCCGCCTGGGGAGGGCTGTTTGCCCTTGGTTTCTTACACTTCATCTCCCACAAGTAGGTCCAGACAGTGGGAGCGACCTGGGTCCTCCCAGATGGTGGGCCTTGGGCCTTTTCTGCAGAGAC--------CTTCCTGCACAGAGGCCGGAAGGGCCCTGAAGCAGGTTTGGATCCTCTATACCTGGGGCTTATTTGGAGGTGGGGAGACCATCACTTGCCCCTTACACCTCTCCTC----CACACCCATCCCACCCCTCACTG-----GGTATCATTTTTTTTTTTT--------------TTTAAAAGGGCAGAACCTTTTGCAGTAGGTGGAAGTAGAGTTTATGGGGTGAGCAGGAACCAGCTCTTGCAGA-GCAGCC----TTGGTGTCTCCTTGTGTTTATCTAAAGGGGTGGGCCCCTCTCAGGGTGGGGGAAGGGAGGGCTCAGACCATTTCTGGTTTGCTCCCCCCTTGGCAGTGGCCCAAGGTGTGC----TGGGTCACTGCACTGCAGCCGTATGGAGTTGGGCTGGA-GGGAGCTAAT---GGTGGGGGTGGGCTCTTGCCCTCATGCTGAGTGTCCTGGCGTTCTCTTGG--TGCCAGCCCTGTGGCTGCTGTGGGTGGGGGCAC-TTGCAGAAGTCAGGCTGACTCCTCCACA-GCCATCAACACCGTGAAATTAAGGAAAGCAGCACACGATGTTGAAAATC-CCCTGGGGTCTGACAGTCCAAGGAGAACAGCAAGGATTTTATTTTTTCATCTAGGTTGAGCAGGCTGATTGCTTCTGGACATATGTATGGGCTGCAGAATAAACAGAATGACTGTGCCCTTGTTCTCCGCAGAGCTGGTTT-CAGCACTTGGGAGCCTCTGAAAAGGAG---------------------------AAAGATTTTA i calJac3.chr5 C 0 C 0 s canFam3.chr9 57433566 1130 - 61074082 GGGCCATTTCTCAGTCTCCT---GCTTTCCACATTCAGGAACTGAAATGAGTAATAAAGAATAACTTGTCTCAAAGAGAGTTACTCAGAATTTCCTTCAAAATGCCCTCCTGGGTCAGGAGCTTAGAATGCCAGCTCTTACCCCCTTGTTGCAGACAGCGCGGCCCTTCAGACACCCCGTGAGCGCTCTCCGCTCTATCTTGGAAGCGTGGGCGCGTTGATGTGATGGTGGAGGAGGAGGGGGCTTCCAGGTGGCACATGCTGGGGTTTGGCACGTGGCCTCCCTTCCTCCCCAGCATGCTCCAAATACTTGAGATGATTGTGGGCAT--TGCCGTGTGCGGCTCCCTCCCTGGGATCACTAGCCCCGCT-----------CTTGCCCTAGGCTCCTTGCACGTCACATCCTGCTGGTGGGTCTGGACAGTAGGGATGATATGGGTCCTGCTAGGTCATAGGTCCTTGGCCTCTTCCTGGGAGACTTTGAGACCATCCCACATGGGTGCCAGAGGG-----------------------------------------------------------------------TCTCCTCTCTTC----CACGCCTTCTCCCCCTCCCCCCGCCCCAGGTAAATTTAA----------------------AAAAGAGGGATGAAGCTTTGTGTAATAAGTGGAAGTAGAGTTTATGGGGTGAGTAGGAACCAGCTCTTGTAAAGGCAGCC----TCCGTGGCTCC-TGTGTTTACCTAACGGGGTGGGGCCCT-GGAGGATGGGAGCAGGAGAAGCTTGGACCACTTCCAGTTTGTTCCCTGGCTGGCAGTGGTCCAGGGCGGGT----TGGGTCACT--CTTAGAGTTGTGTGGGATTGGGCTGGA-GGGGCCTGGCCCAGGGGCGGCTGGCCTCCGGCCTCC--TCTGGGCATGCCGCAGTTCGCCTCACCCCCCACCCCCAA------TTC-TGTAGGGATGCTTTGTGGAAGTCA--CTGATCCCTGCGCA-G-CGTCAATGCCACGAAATTAAGGAA------AATTTGTGTGAAAAATCCCCCAGGG--TTGAAAATCC--------TTGGAGGGCTTTTATTCTCT-GCCTAGATTGAGTGGGATCATTGCTTCTGAACCTATTTATGGGCTTGGAAATAAATCGAATGATGGTAATGGTGTCCTCTGCAGAGCTGGTTTGGAGCACTCATGAGTCTCTGAAAAGGGGGAGATTTTTTTTTTTttttttttttttaaagatttta i canFam3.chr9 C 0 I 126 a score=941991.000000 s hg38.chr17_GL383566v1_alt 74644 310 + 90219 --------------------------------------GAAGG----------------ATGTGTTGGGGCA-ATCTCAAGTACCGTGGGTCTATAGAcagtcatcgaagacactttatgtgctgggcacacatggccaagtctgagtgggtacagaaatggtaatgagatat---agtccttgcctgcagagaacttacattctCACC---------GGGAGTCAGGATGAGGGCGAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCAGCCTCCAAATACTACAGGAATGCCCCGGAGG------------------------TTTTAGGTGGAGGTGAGATTGAGCTGGGCCTTGAGGAAGGAGAAGT---CTTGAGTAGTGGAGAATAAAAA s panTro4.chr17 76264860 310 + 82630442 --------------------------------------GAAGG----------------ATGTGTTGGGGCA-ATCTCAAGTACCGTGGGTCTATAGAcagtcatcgaagacactttatgtgctgggcacacatggccaagtctgagtgggtacagaaatggtaatgagatat---agtccttgcttgcagagaacttacattctcact---------gggagtcagGATGAGGGCGAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCAGCCTCCAAATACTACAGGAATGCCCCGGAGG------------------------TTTTAGGGGGAGGTGAGATTGAGCTGGGCCTTGAGGAAGGAGAAGT---CTTGAGTAGTGGAGAATAAAAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67360557 334 + 73212453 --------------------------------------GAAGG----------------ATGTGTTGGGGCA-ATCTCAAGTACCGTGGGTCTGTAGAcagtcgtcgaacacattttatgtgctgggcacacatggccaagtctgagtgggtacagaaatgataatgagatgt---agtccttgcttgcagagaacttacattctCACC---------AGGAGTCAGGATGAGGGCAAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCAGCCTCCAAATACTACAGGAATGCCCTGGAGTTTTTAGGGGGAGGTGAGATTGAGCTTTTAGGGGGAGGTGAGATTGAGCTGGGCCTGGAGGAAGGAGAAAT---CTTGAGTAGTGGAGAATAAAAA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3698975 310 - 94967081 --------------------------------------GAAGG----------------ATGTGTTGGGGCA-ATCTCAAGTACCGTGGGTCTGTagacagtcatcgaacacactttatgtgctgggcacacatggccaagtcagagtgggtacagaaatgataatgagatgt---agtccttgcttgcagagaacttacattctCACC---------AGGAGTCAGGATGAGGGCGAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCAGCCTCCAAATACTACAGGAATGCCCCGGAGG------------------------TTTTAGGGGGAGGTGAGATTGAGCTGGGCCTTGAGGAAGGAGAAAT---CTTGAGTAGTGGAGAATAAAAA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74859988 295 + 80904711 --------------------------------------GAAGG----------------ATGTGTTGGGGCA-ATCTCAAGTACCGTGGGTCTGTACAcagtcattgaacacactttatgtgttgggcacacacggccaggtctgagtgggtacag-aatgataatgagatgt---agtccttgcttgcagagaacttacattctCACC---------GGGAGTCAGGATGAGGGTGAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCATCCTCCAAATACTACAGGAATGCCCCGGAGG------------------------TTTTAGGGA-----------GAGCTGGGCCTTGAGGA---AGAAGT---CTTGAGTAGTGGAGAATAAAAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74670060 295 + 80997621 --------------------------------------GAAGG----------------ATGTGTTGGGGCA-ATCTCAAGTACCGTGGGTCTGTACACAGTCATCGAACACACTTTATGTGTTGGGCACACACGGCCAGGTCTGAGTGGGTACAG-AATGATAATGAGATGT---AGTCCTTGCTTGCAGAGAACTTACATTCTCACC---------GGGAGTCAGGATGAGGGTGAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCATCCTCCAAATACTACAGGAATGCCCCGGAGG------------------------TTTTAGGGA-----------GAGCTGGGCCTTGAGGA---AGAAGT---CTTGAGTAGTGGAGAATAAAAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68675416 306 + 74645514 --------------------------------------gaagt----------------atgTGTTGGGGCA-ATCTCAAGTACCGTGCGTCTGTACACAGTCATCGAACACACTTTATGTGTTGGGCACACACGGCCAGGTCTGAGTGGGTACAG-AATGATAATGAGATGT---AGTCCTTGCTTGCAGAGAACTTACATTCTCACC---------GGGAGTCAGGATGAGGGTGAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCATCCTCCAAATACTACAGGAATGCCCCGGAGG------------------------TTTTAGGGAGAGGTGAGATTGAGCTGGGCCTTGAGGA---AGAAGT---CTTGAGTAGTGGAGAATAAAAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30726733 307 - 75148670 --------------------------------------GAAGG----------------ATGTGTTAGGGCA-ATCTCATGTACCGTGGGTCTGTACAcagtcatcgaacacactttatgtgttgagcacacacggccaggtctgagtgggtacagaaatgataatgagatgt---agtccttgcttgcagagaactcacattctCACC---------GGGAGTCAGGATGAGGGTAAGACACCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCATCCTCCAAATACTACAGGAATGCCCCAGAGG------------------------TTTTAGGGAGAGGTGAGATTGAGCTGGGCCTTGAGGA---AGAAGT---CTTGAGTAGTGGAGAATAAAAA i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126546015 315 + 159171411 --------------------------------------GAAGG----------------ATGCATTGGGGCA-ATATCGAGTACTGTGGGTCTATACAcagtcatcgaacacgctttacgtgttgggcacacgtggccaggtctcagcgggtacaaaaatgacagtgagat------gtccttgcttgcagagaacttgcactctaCCCACAAGTTCAGGATGTCAGAATGAGGGCGAGGCTCCAGCTCATTAACACCCTTCCCTCCTGAGCAGTTCGGCCTCCAAATACTGCAGGAGTGCCTTGGAGG------------------------TTTTAGGGG-AGGTGAGATTGAGCTGGGCCTTGAGGAAGGAGAAGT---CTTGAGTAGTGGAGAATAAACA i calJac3.chr5 C 0 C 0 s canFam3.chr9 57434822 375 - 61074082 aaaggcaggcgccaaaccgctgcgccacccagggatcAAAAGGGGGAGATTTTTAAGCTATGCTTTGGGGCAGATCCCAAGTGTCTCAGGTCCGTTTGCGTTTGCTGAGCACACACTGTGCGTTGGGCACGTACTACCGGGGCCTCGCAGGTACAAAGATGATTA-AAGATGCGGGGGTCCTCGCTG---------CTGCATTCTCCCT--------GGGGAGGCAAGAAGCAGACGAGACACTAGCTTGATGACACCCTCCCAACCTGAACCAT--AGGTTGCAAATGCTACC-GAATGTTCTGGAAG-----GAGGGACCCCAGGCTA---GATGAGTAGGAGGCAAGATTGAACTGGCCCTTGAGAAATGAGAGGTGGGGGGGGGGGGTGGAGGATGAAAA i canFam3.chr9 I 126 I 223 a score=1273778.000000 s hg38.chr17_GL383566v1_alt 74954 525 + 90219 GGGACTTGGCCAGgtgcgcttgaagtcccagctactcaggaggctgagacacgaggatcgcttgagcccaggagGctactcaggaggctgagacacgaggatcgcttgagcccaggaggctactcaggaggctgagacaggaggatcgcttgaagccaggagttcaaggctgcagccctgtgacagcgcctggaaatagacacggcactccagcctgggtggcgtcatgagaccccatctgtaagaaGGTCTTTTCCAATGCGGAAGGCAGCAAGGGCCCACACAGGGCAGCTGCAGGATCCAGGGGGACACTGGGGACAGGTTCTCTCTGGCAGCTCCACTGCTGCTCCAGGCTTTCCCGAT--TGCCTCACCCGGCCTTCCAATGGGGTGGAGGTAGTGGTAGTCTACAGGCAGTGTGGTCCAGTGGTTACACTTGGGGGCTCAGAGCCGCCAGCCCCTTGGGATTAAATCTCACC-AGGCTG-CGCCTCTCCCTGTGGCACAAGGTTCTCACCTCATGCATCTCAT s panTro4.chr17 76265170 481 + 82630442 GGGACTTGGCCAGgtgcgcttgaagtcccagctactcaggaggctgagacacgaggatcgcttgagcccaggaggctactcaggaggctgagaca--------------------------------------------ggaggatcgcttgaagccaggagttcaaggctgcagccctgtgacagcgcctggaaatagacactgcactccagcctgggtggcgtcatgagaccccatctgtaagaaGGTCTTTTCCAATGCGGAAGGCAGCAAGGGCCCACACAGGGCAGCTGCAGGATCCAGGGGGACACTGGGGACAGGTTCTCTCTGGCAGCTCCATTGCTGCTCCAGGCTTTCCCAGT--TGCCTCACCCGGCCTTCCAATGGGGTGGAGGTAGTGGTAGTCTACAGGCAGTGTGGTCCAGTGGTTACACTTGGGGGCTCAGAGCCGCCAGCCCCTTGGGATTAAATCTCACC-AGGCTG-CGCCTCTCCCTGTGGCACAAGGTTCTCACCTCATGCATCTCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67360891 436 + 73212453 GAGACTTGGCCAGgtgcccttgtagtcccagctactcaggaggctgagaca----------------------------------------------------------------------------------------ggaggatcgcttgagcccaggagttcaaggctgcagcactatgacagcgcctgg-aacagacactgcactccagcctgggtggcgtcatgagaccgcatctgtaagaaGGTCTTTTCCAATGGGGAAGGCAGCAAGGGCCCACATGGGGCAGCTGCAGGATCCAGGGGGACACTGGGGACAGGTTCTCTCTGGCAGCTCCACTGCTGCTCCAGGCTTTCCCGAT--TGCCTCACTCGGCCTTCCAATGGGGTGGAGGTAGTGGTAGTCTACAGGCAGTGTGGTCCAGTGGTTACACTTGGAGGCTCAGAGCCGCCAGCCCCTTGGGATTAAATCTCACC-AGGCTG-CGCCTCTCCCTGTAGCACAAAGTTCTTACCTCATGCATCTCAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3699285 437 - 94967081 GGGACTTGACCAGgtgcgcttgaagtcccagctactcaggaggctgagaca----------------------------------------------------------------------------------------ggaggatcgcttgagcccaggagttcaaggctgcagcactatgacagcgcctggaaatagacactgcactccagcctgggtggcgtcatgagacccaatctgtaagaaGGTCTTTTCCAATGGGGAAGGCAGCAAGGGCCCACACGGGGCAGCTGCAGGATCCAGGGGGACACTGGGGACAGGCTGTCTCTGGCAGCTCCACTGCTGCTCCAGGCTTTCTCAGC--TGCCTCACCCGGCCTTCCAATGGGGTGGAGGTAGTGGTAGTCTACAGGCAGTGTGGTCCAGTGGTTACACTTGGGGGCTCAGAGCCCCCAGCCCCTTGGGATTAAATCTCACC-AGGCTG-CGCCTCTCCCTGTGGCACAAGGTTCTTACCTCATGCATCTCAT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74860283 438 + 80904711 GGGACTTGGCCAGgtgcacctgtagtcccagctactcaggagactgagaca----------------------------------------------------------------------------------------ggaggattgcttgagcccaggagttcgaggctgcagcactatgacagcacccggaaacagacactgcactccagcctgggtgacgtcatgagaccccatctgtaagaaGGTCTTGTCCAATGGGGAAGGCAGCAAGGGCCCACACGGGGCAGCTGCAGGATATAGGGGGACACTGGGGACAGGCTCTCTCTAGCAGCTCCACTGCTGCTCCAGGCTTTCCTGAT-GTGCCTCACCTGGCCTTCTAGTGAGTTGGAGATAGTGGTAGTCTACAGGcagtgtggtccagtggttacacttggggactcagagccgccaaccccttgggattaaatctcacc-gggctg-cgcctctccctgtggcacaaggttctcacctcatgcatctcat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74670355 438 + 80997621 GGGACTTGGCCAGgtgcacctgtagtcccagctactcaggagactgagaca----------------------------------------------------------------------------------------ggaggattgcttgagcccaggagttcgaggctgcagcactatgacagcacccggaaacagacactgcactccagcctgggcgacgtcatgagaccccatctgtaagaaGGTCTTGTCCAATGGGGAAGGCAGCAAGGGCCCACACGGGGCAGCTGCAGGATATAGGGGGACACTGGGGACAGGCTCTCTCTAGCAGCTCCACTGCTGCTCCAGGCTTTCCTGAT-GTGCCTCACCTGGCCTTCTAGTGAGTTGGAGATAGTGGTAGTCTACaggcagtgtggtccagtggttacacttggggactcagagccgccaacgccttgggattaaatctcacc-gggctg-cgcctctccctgtggcacaaggttctcacctcatgcatctcat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68675722 438 + 74645514 GGGACTTGGCCaggtacacctgtagtcctagctactcaggagactgagaca----------------------------------------------------------------------------------------ggaggattgcttgagcccaggagttcgaggctgcagcaCTATGACAGCACCCGGAAACAGactccgcactccagcctgggcgacgtcatgagaccccatctgtaagAAGGTCTTGTCCAATGGGGAAGGCAGCAAGGGTCCACACGGGGCAGCTGCGGGATCTAGGGGGACACTGGGGACAGGCTCTCTCTGGCAGCTCCACTGCTGCTCCAGGCTTTCCTGAT-GTGCCTCACCTGGCCTTCTAGTGAGTTGGAGATAGTGGTAGTCTACAGGCAGTGTGGTCCAGTGGTTACACTTGGGGACTCAGAGCCGCCAACCCCTTGGGATTAAATCTCACC-GGGCTG-CGCCTCTCCCTGTGGCACAAGGTTCTCACCTCATGCATCTCAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30727040 437 - 75148670 GGGACTTGGCCAGgtgcacctgtagtcccagctactcaggagactgagaca----------------------------------------------------------------------------------------ggaggatcgcttgagcccaggagttggaggctgcagcactatgacagcacccggaaacagacaccgcactccagcctgggcgacgtcatgagaccccatctgtaagaaGGTCTTGTCCAGTGGGGAAGGCAGCAAGAGCCCACACGGGGCAGCTGCGGAATCTAGGGGGACACTGGGGACAGG--CTCTCTGGCAGCTCCACTGCTGCTCCAGGCTTTCCTGAT-GTGCCTCACCTGGCCTTCTAGTGAGTTGGAGATAGTGGTAGTCTACAGGcagtgtggtccaatggttacacttggggactcagagccgccaaccccttgggattaaatctcaccaaggctg-cacctctccctgtggcacaaggtcctcacctcatgcatctcat i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126546330 437 + 159171411 GGGCCTTGGCCAGATgcacctgtagtcccagttactcaggaggctgagatg----------------------------------------------------------------------------------------ggaggatcgcttgagcccaggagtttgaggctgtagcactatgacagcacccagaaatagacactgcactccagcctgggtgacgtcgtgagaccccatctTTGAGAAGGTCTTTTCCAATGAGGAAGGAAGCAAGGGCCTGCATGAGGTGGCTGCAGGGTTCAGGGGTACAC--AGGACAGGTTCTCTCTGGCAGCTCCAC-ACTGCTCCAGGCTTTCCTGGAGGTGCCTCACTGGGCCCTCCAATGGGGTGGAGGTAGTGCTAGTCTACAGGcagtgtggtccagtggttatacccagcggctcagagctgccagcctcctggggtcaaatcccacc-aggctgccgcttctccctgtggcacaaggttctcacctcatgcgtctcct i calJac3.chr5 C 0 C 0 e canFam3.chr9 57435197 223 - 61074082 I a score=29421.000000 s hg38.chr17_GL383566v1_alt 75479 12 + 90219 TTGCCTCATTTG s panTro4.chr17 76265651 12 + 82630442 TTGCCTCATTTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361327 12 + 73212453 TTGCCTCATTTT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3699722 12 - 94967081 TTGCCTCATTTG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74860721 12 + 80904711 ttgcctcatttg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74670793 12 + 80997621 ttgcctcatttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68676160 12 + 74645514 TTGCctcatttg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30727477 12 - 75148670 ttgcttcatttg i chlSab2.chr16 C 0 I 39 e canFam3.chr9 57435197 223 - 61074082 I e calJac3.chr5 126546767 0 + 159171411 C a score=22565.000000 s hg38.chr17_GL383566v1_alt 75491 16 + 90219 TTTT--TTTGTGTGTGTG s panTro4.chr17 76265663 16 + 82630442 TTTT--TTTGTGTGTGTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361339 18 + 73212453 TTTTTGTGTGTGTGTGTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3699734 18 - 94967081 TTTTTTTGTGTGTGTGTG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74860733 16 + 80904711 --tttgtgtgtgtgtgtg i rheMac3.chr16 C 0 I 68 s macFas5.chr16 74670805 16 + 80997621 --tttgtgtgtgtgtgtg i macFas5.chr16 C 0 I 10 s papAnu2.chr16 68676172 16 + 74645514 --tttgtgtgtgtgtgtg i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57435197 223 - 61074082 I e calJac3.chr5 126546767 0 + 159171411 C e chlSab2.chr16 30727489 39 - 75148670 I a score=22223.000000 s hg38.chr17_GL383566v1_alt 75507 29 + 90219 GTGttttttaattttattt---atttatttat s panTro4.chr17 76265679 29 + 82630442 GTGtttttttattttattt---atttatttat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361357 29 + 73212453 GTGttttttaattttattc---atttatttat i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3699752 29 - 94967081 GTGtttttttattttattt---atttatttat i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74670831 29 + 80997621 GTGtttttcttttcttttc---tttttttttt i macFas5.chr16 I 10 C 0 s papAnu2.chr16 68676188 29 + 74645514 ---tttttcttttcttttcttttttttttttt i papAnu2.chr16 C 0 C 0 e canFam3.chr9 57435197 223 - 61074082 I e rheMac3.chr16 74860749 68 + 80904711 I e calJac3.chr5 126546767 0 + 159171411 C e chlSab2.chr16 30727489 39 - 75148670 I a score=78982.000000 s hg38.chr17_GL383566v1_alt 75536 48 + 90219 ttttgagacggagtctcactctgtctcccaggctggagtgcaatggca s panTro4.chr17 76265708 48 + 82630442 ttttgagacggagtctcactctgtctcccaggctggagtgcaatggca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361386 48 + 73212453 ttttgagacggagtctcactctgtctcccaggctggagtgcaatggca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3699781 48 - 94967081 ttttgagacggagtctcactctgtctcccaggctggagtgcaatggca i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74670860 37 + 80997621 ttttgagacagagtctcactctgttgcccaggctgaa----------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68676217 48 + 74645514 ttttgagacagagtctcactctgttgcccaggctgaagtgcaatggca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30727528 48 - 75148670 ttttgagacggagtctcactctgttgcccaggctgaagtgcaatggca i chlSab2.chr16 I 39 C 0 e canFam3.chr9 57435197 223 - 61074082 I e rheMac3.chr16 74860749 68 + 80904711 I e calJac3.chr5 126546767 0 + 159171411 C a score=539231.000000 s hg38.chr17_GL383566v1_alt 75584 230 + 90219 tgatctcagcttactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgagtggctgggattgtaggaacgtgccactgcgcccagctaatttttatatttttactagagatggggtttcaccatgttggtcaggctgatctcgaactcctgacctcgtgatctgcctgccttggcctcccaaagtgctgtgattacaggcatgagccaccacgc s panTro4.chr17 76265756 230 + 82630442 tgatctcggcttactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgagtggctgggattgtaggaacgtgccaccgcgcccagctaatttttatatttttactagagacggggtttcaccatgttggtcaggctgatctcgaactcctgacctcgtgatctgcctgccttggcctcccaaagtgctgtgattacaggcatgagccaccacgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361434 211 + 73212453 tgatctcagcttactgcaacctccgcctcccaggttcaagtgattctcctgcctcagcctcctgagtggctgggattata-gagcgtgccaccactcccagctaatttttatatttttactagagatggggtttcaccatgttggtcaggctgatctcgaactcctgacctcgtgatctgcctggc------------------atgattacaggcgtgagccaccatgc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3699829 230 - 94967081 tgatctcggcttactgcaacctccgcctctcaggttcaagtggttctcctgcctcagcctcctgagtggctgggattatagaagcgtgccaccacgcccagctaatttttatatttttactagagatggggtttcaccatgttggtcaggctgatctcgaactcctgacctcgtgatctgcctgtcttggcctcccaaagtgctgtgattacaggcatgagccaccacgc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74860817 228 + 80904711 tgatctcagcttactgcaacctctgcctcccaggtttaagtgattctcgtgcctcagcctcctgagtggctggggttataggagtgcgccaccacgcccacctaatttttgtatttttactagagatggggtttctccatgttggtcaggctgatcttgaactcccgacctcgtgatctgcctgccttggcctcccaaagtgttgggattacaggcgtgagcccc--cgc i rheMac3.chr16 I 68 C 0 s macFas5.chr16 74670897 228 + 80997621 tgatctcagcttactgcaacctctgccttccaggtttaagtgattctcctgcctcagcctcctgagtggctgggattataggagtgcgccaccacgcccacctaatttttgtatttttactagagatggggtttcaccatgttggtcaggctgatcttgaactcctgacctcgtgatctgcctgccttggcctcccaaagtgttgggattacaggcgtgagccac--tgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68676265 230 + 74645514 tgatctcagcttactgcaacctctgcctcccaggtttaagtgattctcctgcctcagcctcctgagtggctgggattataggagtgcgccaccacgcccagctaatttttgtatttttactagagatggggtttcaccatgttggtcaggctgatcttgaactcctgacctcgtgatctgcctgccttggcctcccaaagtgttgggattacaggcgtgagccaccacgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30727576 230 - 75148670 tgatctcagcttactgcaacctctgcctcccaggtttaagtgattctcctgcctcagcctcctgagtggctgggattataggagtgcgccaccatgcccacctaatttttgtatttttactagagatggggtttcaccatgttggtcaggctgatcttgaactcctgacctcgtgatctgcctgccttggcctcccaaagtgttgggattacaggcgtgagccaccacgc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57435197 223 - 61074082 I e calJac3.chr5 126546767 0 + 159171411 C a score=15964.000000 s hg38.chr17_GL383566v1_alt 75814 5 + 90219 ccagc s panTro4.chr17 76265986 5 + 82630442 ccagc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361645 5 + 73212453 ccagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3700059 5 - 94967081 ccagc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74861045 5 + 80904711 ccagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74671125 5 + 80997621 ccagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68676495 5 + 74645514 ccagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30727806 5 - 75148670 ccagc i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57435420 5 - 61074082 CCATC i canFam3.chr9 I 223 C 0 e calJac3.chr5 126546767 0 + 159171411 C a score=375694.000000 s hg38.chr17_GL383566v1_alt 75819 111 + 90219 cTGcctcatttgttaaat-gggacagtgctatgttgttgtaaaggttaaacgagttcatatttgaaaaagctgagaaatgcctgCTCTGTAACCTGTTAGCTGCTGTCATGA s panTro4.chr17 76265991 111 + 82630442 cTGcctcatttgttaaat-gggacagtgctatgttgttgtaaaggttaaacgagttcatatttgaaaaagctgagagatgcctgCTCTGTAACCTGTTAGCTGCTGTCATGA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361650 111 + 73212453 cTGcctcatttgttaaat-gggacagtgctatgttgttgtaaaggttaaacgagttcatatttgaaaaagctgagaaatgcctgCTCTGTAACCTGTTAGCTGCTGTCGTGA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3700064 111 - 94967081 cTGcctcatttgttaaat-gggacagtgctatgttgttgtaaaggttaaacgagttcatatttgaaaaagctgagaaatgcctgCTCTGTAACCTGTTAGCTGCTGTCGTGA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74861050 111 + 80904711 ctgcctcatttgttaaat-gggacagtgctatgttgttgtaaaggttaaacgagttcatatttgaaaaagctgagaaatgcctgCTCTGTGACCTGTTAGCTGCTGTCGTGA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74671130 111 + 80997621 ctgcctcatttgttaaat-gggacagtgctatgttgttgtaaaggttaaacgagttcatatttgaaaaagctgagaaatgcctgctctgtgacctgttagctgctgtCGTGA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68676500 111 + 74645514 ctgcctCATTTGTTAAAT-GGGACAGTGCTATGTTGTTGTAAAGGTTAAACGAGTTCATATTTGAAAAAGCTGAGAAATGCCTGCTCTGTGACCTGTTAGCTGCTGTCGTGA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30727811 111 - 75148670 ctgcctcatttgttaaat-gggacagtgctatgttgttgtaaaggttaaacgagttcatatttgaaaaagctgagaaatgcctgCTCTGTGACCTGTTAGCTGCTGTCGTGA i chlSab2.chr16 C 0 I 5 s calJac3.chr5 126546767 110 + 159171411 ctacctcgttggttaaat-gggacggtgctatgttgttgtaaaggttaaacgagttcatatttgaaaacgctgagaaacgcctgctctgtagtCTGTTA-CTGCTGCTGTGG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57435425 99 - 61074082 TCGCTTCATTTGTTAAACAGGGTTGATGCTGATTTGTTGTGATGATTGCATAATCTCGCGCACAAAAAGGCCTAGAAAGG-------------CTGGTGGCTGCTACCATCT i canFam3.chr9 C 0 C 0 a score=830185.000000 s hg38.chr17_GL383566v1_alt 75930 359 + 90219 TC------ATGATTGTCATTGA---CAGGAGGATGGAGAAGGCTGG--GGTTACGCCATTGCTAGGACGTTCCAGAAGCCTCCATGATCTTCCCT-------TACTGTGGTCAGAGCATGGTGCAGGGTC------TCTCCCCCAGCCCCTCAGCACTGGAGCCAGCTGCA--CTGTACC-------CGCCCTGGCTCTCTAG-GTTCTGAGTTTTGGGACT--------------------CCCTTTGCATACTAGGTCACATGGAACTTGCCGTCATTCCCAGGCTCCCCTGGAAACTCTCTGTGGGTGGCAGCGGCAGGAGGACTTACCCGAGGCCGATGAGCCACAGAAGCGGG-----ACTGAGGTTGCGTCACACCCCTACTGGCACCTGGGAATTACTCTGGAGAttcttt s panTro4.chr17 76266102 359 + 82630442 TC------ATGATTGTCATTGA---CAGGAGGATGGAGAAGGCTAG--GGTTATGCCATTGCTAGGACGTTCCAGAAGCCTCCATGATCTTCCCT-------TACTGTGGTCAGAGCATGGTGCAGGGTC------TCTCCCCCAGCCCCTCAGCACTGGAGCCAGCTGCA--CTGTACC-------CGCCCTGGTTCTCTAG-GTTCTGAGTTTTGGGGCT--------------------CCCTTTGCATACTAGGTCACGTGGAACTTGCCGTTATTCCCAGGCTCCCCTGGAAACTCTCTGTGGGTGGCAGCGGCAGGAGGACTTACCCGAGGCCGATGAGCCACAGAAGCCGG-----ACTGAGGTTGCGTCACACCCCCACTGGCACCTGGGAATTACTCTGGAGAttcttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67361761 359 + 73212453 TC------ATGATTTTCATTGACAGCAGGAGGATAGAGAAGGCTGG--GGTTACGCCATTGCTAGGACGTTCCAGGAGCCTCCATGATCTTCCCT-------TACTGTGGTGA-AACATGGTGCAGGGTC------TCTCCCCTAGCCCCTCAGCACTGGAGCCAGCTGCA--CTGTACC---------CCCCGGTTCTCTGG-GTTCTGAGTTTTGGGACT--------------------CCCTTTGCATACTAGGTCACGTGGAACTTGCCATTATTCCCAGGCTCCCCTGGGGACTCTCTGTGTGTGGCAGTGGCAGGAGGACTTACCCGAGGCCAATGAGCCACAAAAGCAGG-----ACTGAGGTTGCGTCACACCCCCACTGGCACCTGGGAATTACTCTGGAGAttcttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3700175 358 - 94967081 TC------ATGATTGTCATTGACAGCAGGAGAATGGAGAAGGCTGG--GGTTACGCCATTGCTAGGACGTTCCAGGAGCCTCCATGATCTTCCCT-------TACTGTGGTCAGACTATGGTGCAGGGTC------TCTCCCCCAGCCCCTCAGCACTGGAGCCAGCTGCA--CTGTACC---------TCCCGGTTCTCTGG-GTTCTGAGTTTTGGGACT--------------------CCTTTTGCATACTAGGTCGCATGGAACTTGCCGTTATTCCCAGGCTCCCCTGGAAACTCTCTGT--GTGGCAGTGACGGGAGGACTTACCTGAGGCCGATGAGCCACAGAAGCGGG-----ACTGAGGTTGCGTTGTACCCCCACTGGCACCTGGGAATGACTCTGGAGAttcttt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74861161 360 + 80904711 TC------GTGATTGTCATTGACAGCAGGAGGATGGAGAAGGCTGG--GGTTACGCCATTGCTAGGATGTTCCAGGAGCCTCCATGATCTTCCCT-------TACTGCAGTCAGAGTACGGTGCAGGGTC------TCTCCCCCAGCCCGTCAGCACTGGAGCCAGCTGCA--CTGTACC---------CCCCGGTTCTCTGG-GTTCTGAGTTTTGGGACT--------------------CCCTTTGCATACTAGGTCACATGGAACTTGCTGTTATTCCCAGGCTCCCCTGGAAACTCTCTGTGTGTGGCAGTGGCAGGAGGACTTACCCAAGGCCCATGAGCCACAGAAGCGGG-----ACTGAGGTTGCATGGCACCCCCACTGGCACCTGGGAATGACTCTGGGGAttcttt i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74671241 366 + 80997621 TCGTGATTGTGATTGTCATTGACAGCAGGAGGATGGAGAAGGCTGG--GGTTACGCCATTGCTAGGATGTTCCAGGAGCCTCCATGATCTTCCCT-------TACTGCAGTCAGAGTACGGTGCAGGGTC------TCTCCCCCAGCCCGTCAGCACTGGAGCCAGCTGCA--CTGTACC---------CCCCGGTTCTCTGG-GTTCTGAGTTTTGGGACT--------------------CCCTTTGCATACTAGGTCACATGGAACTTGCTGTTATTCCCAGGCTCCCCTGGAAACTCTCTGTGTGTGGCAGTGGCAGGAGGACTTACCCAAGGCCCATGAGCCACAGAAGCGGG-----ACTGAGGTTGCATGGCACCCCCACTGGCACCTGGGAATGACTCTGGGGAttcttt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68676611 358 + 74645514 TC------GTGATTGTCATTGACAGCAGGAGGATGGAGAAGGCTGG--GGTTACGCCATTGCTAGGATGTTCCAGGAGCCTCCATGATCTTCCCT-------TACTGCAGTCAGAGTATGGTGCAGGGTC------TCTCCCCCAGCCCGTCAGCACTGGAGCCAGCTGCA--CTGTACC---------CCCCGGTTCTCTGG-GTTCTGAGTTTTGGGACT--------------------CCCTTTGCATACTAGGTCACATGGAACTTGCTGTTATTCCCAGGCTCCCCTGGAAA--CTCTGTGTGTGGCAGTGGCAGGAGGACTTACCCAGGGCCCATGAGCCACAGAATCGGA-----ACTGAGGTTGCATGGCACCCCCACTGGCACTTGGGAATGACTCTGgggattcttt i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126546877 364 + 159171411 TC------ATGATTGTCATTGACAGCAGGAGGATGGAGAAGGGTGG--GGTTATGCCATTGCTAGGGCGCTCCAGGAGCCTCCATGATATTCCCT-------TACTGCAGTCAGAGTGAGCTGCAGGGTC------CCTCCCCCAGCCCTTCAGCACTGGAACCAGCTGCA--CTGCACCGCCCCCTGCCCCCGGTTCTGTGG-GTTCTGAGTTTTGGGACTAGGGACTAGTTTTGGGACTGAGTTTTGCATATTAGGTCACATGGAACTTGCCTTTATTCCCAGGCTCCCCTGGAAACCCCCT----GTGGTGGTGGCAGGAGGACTTACCTGAGGCCCACG--------------------GCTGAACTTGTGTCACACCCCCACTGCTACCTGGGAATTACTCTGGAGA------ i calJac3.chr5 C 0 C 0 s canFam3.chr9 57435524 353 - 61074082 TC------ATCGTTCTTACGGGCAGTAGGAAGGCCGAGAAGGCCAAATGTCCCTGACTTTCCCGAGAAG--CCTGGAGGCTTCCTGGTCCTCCCTGCAGCTCTGCTGCTTTGGAGGCCCGGAGCGAGGCCCAGGCTTCTCCCTCGGCCCCTCGGTGCCGGAGCCGGCTGAGATCTGAACC-------CCCTCTGGTTTTCTGGTGTTCTGAGTTT--GGAAT--------------------------------GAGGTCACATGGA--------------CCTGGCTCCTCTGGCAATCCTCGCTG-GGAATCCTCCCGTGGGGCCTCACCTGAGGCCCCCAAACCACAGAAATCGGGAGCAAGAGGGGTGGGGATTGGTCTGTGTAAGCACTTGGGAGCTATTCT-GAGATTCTCT i canFam3.chr9 C 0 I 444 e chlSab2.chr16 30727922 5 - 75148670 I a score=937746.000000 s hg38.chr17_GL383566v1_alt 76289 400 + 90219 ttttattttttatttttttgagatggagtcttgctctgttgcccaggctggagtgcagtggcacgatctcggttcactgcaacctctgcctcccaggttcaagcaattctcatgcctcagcctcctgagtagctgggattacaggcatgtgccaccgtgcccagctaatttttgtattttttagtagagatggggttttaccatactggccaggctggtctcgaactccggacctcagg-tgatccacccgcctcagcctcccaaagtgctgggatcacaggcatgagccaccgtgcccagccACTCTGGAGTTTCTCTGTGGCTTTCAGGAGATTCCTGAAGGGGCACCAGCCACGATTAAAAAGCTCTATGCTGTCGTGACTTCTGAGTCCTGGGCAGG s panTro4.chr17 76266461 399 + 82630442 ttttattttttatttttttgagatggagtctcgctctgttgcccaggctggagtgcagtggcacgatctcggttcactgcaacctctgcctcccaggttcaagcaattctcatgcctcagcctcctgagtagctgggattacaggcatgtgccaccgtgcccagctaatttttgtattttttagtagagacggggttttaccatactggccaggctggtctcgaactccggacctcagg-tgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcccagccACTCTGGAGTTTCTCTGTGGCTTTCAGGAGATTCCTGA-GGGGCACCAGCCATGATTAAAAAGCTCTATGCTGTAGTGACTTCTGAGTCCTGGGCAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67362120 399 + 73212453 ttttctttttt-cttttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcggttcactgcaacctctgcctcccgggttcaagcaattctcatgcctcagcctcctgagtagctgggattacaggcgtgtgccaccgtgcccagctaatttttgtattttttagtagagacagggtttcaccttactggccaggctggtctcgaactccagacgtcagg-tgatccacctgcctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcctagccACTCTGGAGTTTCTCCGTGGCTTTCAGGAGATTCCTGAAGGGGCACCAGCCACGATTAAAAAGCTCTATGCTGTCGTGACTTCTGGGTCCTGGGCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3700533 400 - 94967081 ttttatttttt-attttttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcggttcactgcaacctctgcctcccgggttcaagcaattctcatgcctcagcctcctgagtagctggaattataggcgtgtgccaccgtgcccagctaatttttgtattttttagtagagacggggtttcaccatactggccaggctggtcttgaactccggacctcaggttgatccacccgcctcagcctcccaaagtgctgggattacaggcatgagccaccgtgcccagccACTCTGGAGTTTCTCTGTGGCTTTCAGGAGATTCCTGAAGGAGCACCAGCCACGATTAAAAAGCTCTATGCTGTCGTGACTTCTGAGTCCTGGGCAGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74861521 399 + 80904711 ttttatttttt-attttttgagatggagtctcactctgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctttgcctcccgggttcaagcaattctcatgcctcagcatcctgagtagctgggattacagatgcgtgccaccgtgcccagctaatttttgtattttttagtagagacggggtttcaccatactggccaggctggtctagaactcctgacctcagg-tgatccacctgcctcagcctcccaaagtgctgggattacaggcaggaaccaccgtgcccggccACTCTGGAGTTTCTCTGTGGCTTTCAGGAGATTCCTGAAGGGGCACCAGCCATGATTCAAAAGCTCTATGCTGTCATGACTTCTGAGTCCTGAGCAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74671607 399 + 80997621 ttttatttttt-attttttgagatggagtctcactctgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctttgcctcccgggttcaagcaattctcatgcctcagcatcctgagtagctgggattacagatgcgtgccaccgtgcccagctaatttttgtattttttagtagagacggggtttcaccatactggccaggctggtctagaactcctgacctcagg-tgatccacctgcctcagcctcccaaagtgctgggattacaggcaggaaccactgtgcccggccACTCTGGAGTTTCTCTGTGGCTTTCAGGAGATTCCTGAAGGGGCACCAGCCATGATTCAAAAGCTCTATGCTGTCATGACTTCTGAGTCCTGAGCAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68676969 399 + 74645514 ttttatttttt-attttttgagatggagtctcactctgttgctcaggctggaatgcagtggtgcaatctcggctcactgcaacctttgcctcccgggttcaagcaattctcatgcctcagcctcctgagtagctgggattacagatgcgtgccaccgtgcccagctaatttttgtattttttagtagagacggggtttcaccatactggccaggctggtctagaactcctgacctcagg-tgatccacctgcctcagcctcccaaagtgctgggattacaggtaggaaccactgtgcccggccactctGGAGTTTCTCTGTGGCTTTCAGGAGATTCCTGAAGGGGCACCAGCCATGATTCAAAAGCTCTATGCTGTCATGACTTCTGAGTCCtgagcagg i papAnu2.chr16 C 0 C 0 s calJac3.chr5 126547241 391 + 159171411 -------tctt-tttttttgagatggagtctggctctgtcgctcaggctggagtacagtggcataatcttggctcactgcaacttctgcctcctgggttcaagcaattctcgtgcctcagcttcctgagtaggtgggattataggcacaggctatcatgcccagctaatttttgta-tttttagtagagacgaggtttcaccatactagccaggctggtctcgaactcttgacctcagg-tgatccaccggcctctgcctcccaaagtgctgggattacagacatgagccaccgtgcctggccAGTCTGGACTTTATTTGTGGCTTTCAGGAGATTCCTGAAGGGGCACCAGGCAAGATTAAAATGCTCTACGCTGTTGTGACTTCTAAGTCCTGGGCAGG i calJac3.chr5 C 0 C 0 e canFam3.chr9 57435877 444 - 61074082 I e chlSab2.chr16 30727922 5 - 75148670 I a score=759696.000000 s hg38.chr17_GL383566v1_alt 76689 263 + 90219 GAGGGAGGCTGCACCCACACAGGAAGCAGCTTCTGCCGTGATTCAGTGTGCTGGCTCGCCGTGGTGGACAGGGCTGCACCCTCACCCAGCGCCCCGGGAGCTGACTTACGGGAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCCCCA-----------GTCAG---CTAACCC-GGTGACAGGCGAGCGTGGGAAGGGCACAAGCACAGGGTTTCTTCCTCTTCTCCCCCAGCCCCGTCTCCGCGCCTGTTCTCGCTGCCTCTTGCCTCCTCACG s panTro4.chr17 76266860 263 + 82630442 GAGGGAGGCTGCACCCACACAGGAAGCAGCTTCTGCTGTGATTCAGTGTGCTGGCTCGCCATGGTGGACAGGGCTGCACCCTCACCCAGCGCCCCGGGAGCTGACTTACGGGAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCCCCA-----------GTCAG---CTAACCC-GGTGACAGGCGAGCATGGGAAGGGCACAAGCACAGGGTTTCTTCCTCTTCTCCCCCAACCCCGTCTCCGCGCCTGTTCTCGCTGCCTCTTGCCTCCTCACG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67362519 263 + 73212453 GAGGGAGGCTGCACCCACACATGAAGCAGCTTCTGCCGTGATTCAGTGTGCTGGCTCGCCATGGTGGACAGGGCTGCACCCCCACCCAGCGCCCCGGGAGCTGACTTACGGGAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCCCCA-----------GTCAG---CTAACCC-GGTGACAGGCGAGCGTGGGAAGGGCACAAGCACAGGGTTTCTTCCTCTTCTCCCCCAACCCCGTCTCCGCGCCTGTTCTCGCTGCCTCTTGCCTCCTCACG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3700933 263 - 94967081 GAGGGAGGCTGCACCCACACAGGAAGCAGCTTCTGCCGTGATTCAGTGTGCTGGCTCGCCATGGTGGACAGGGCTGCACCCCCACCCAGCGCCCTGGGAGCTGACTTACTGAAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCGCCA-----------GTCAG---CTAACCC-GGTGACAGACAAGCGTGGGAAGGGCACAAGCACAGGATTGCTTCCTCTTCTCCCCCAACCCCGTCTCCGTGCCTGTTCCCGCTGCCTCTTGCCTCCTCACG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74861920 277 + 80904711 GAGGGAGGCTGCACCCGCAGAGGAAGCAGCTTCTGTTGTGATTCAGTACGCTGGCTCGCCATGGTGGACAGGGCTGCACCCCCACCCAGCGCCCCAGGAGCTGACTTATGGGAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCCCCAGAGAACACTTTGCCAGGCACTAACCT-GGTGCCAGGCAACCATGGGAAGGGCACAAGCCCAGGGTTTCTTCCTCTTCTCCCCCAACCCCGTCTCCGTGCCTGTTCTCGCTGCCTCTTGCCTCCTCACG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74672006 270 + 80997621 GAGGGAGGCTGCACCCACAGAGGAAGCAGCTTCTGTTGTGATTCAGTACGCTGGCTCGCCATGGTGGACAGGGCTGCACCCCCACCCAGCGCCCCAGGAGCTGACTTATGGGAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCCC-------CACTTTGCCAGGCACTAACCT-GGTGCCAGGCAACCATGGGAAGGGCACAAGCCCAGGGTTTCTTCCTCTTCTCCCCCAACCCCGTCTCCGTGCCTGTTCTCGCTGCCTCTTGCCTCCTCACG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68677368 267 + 74645514 gagggaggctgcaCCCGCAGAGGAAGCAGCTTCTGTTGTGATTCAGTACGCTGGCTCGCCATGGTGGACA----------CCCACCCAGTGCCCCAGGAGCTGACTTACGGGAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCCCCAGAGAACACTTTGCCAGGCACTAACCT-GGTGCCAGGCAACCATGGGAAGGGCACAAGCCCAgggtttcttcctcttctcccccaACCCCGTCTCCGTGCCTGTCCTCGCTGCCTCTTGCCTCCTCACG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30727927 263 - 75148670 GAGGGAGGCTGCACCCGCAGAGGAAGCAGCTTCTGTTGTGATTCAGTACGCTGGCTCGCCATGGTGGACAGGGCTGCATCCCCACCCAGCGCCCCAGGAGCTGACTTACGGGAAGGGCAAGGAATTGCACCCTCAGAGAACACTTCCCCA-----------GTCAG---CTAACCT-GGTGCCAGGCAAGCGTGGGAAGGGCACAAGCCCAGGGTTTCTTCCTCTTCTCCCCCAACCCCGTCTCCGTGCCTGTTCTCGCTGCCTCTTGCCTCCTCACG i chlSab2.chr16 I 5 C 0 s calJac3.chr5 126547632 249 + 159171411 GAGGGAGGCTGCATCCTCAGAGGAAGCAGCTTCTGCCGTGATTCAGTGTGCTGGCTCTCCATGGTGGACGGGGAT-CACTCCCATCCAGCGCCCCAGGAGCTGGCTTACGGGAAGGGCCCGGAATTGCACGCTCACAGAACACTTCCCCA-----------GTCAA---CTAACCCTGGGGACAGGCGAGCGTGGGAAGGGCAC-AGCACAGGGTTTCTTCCTCT-----------CCTGTCTCC--GCCTCTTCTCGCTGCCTCTTGTCTCCTCACG i calJac3.chr5 C 0 C 0 e canFam3.chr9 57435877 444 - 61074082 I a score=856331.000000 s hg38.chr17_GL383566v1_alt 76952 263 + 90219 TCCAAGCTTGTCTGCTCTGGCGCATTCAGGGGACCTGGACTGGAGAGAAAAAGCCACCTCGTACGGTTAGTCTGTGGCTCTGTCTGACTTGTGT-CC-------------------TCCGCCGAGGCCCCTCAGTTGTGAGACAGCTGGCTGAGCCTAAGTCCTGGGGCCAGCCCTCTCCCTAGTCTGTTGCAAAGGTAGAAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCGCTCAC------GCCAGACCGCAGGCACTTGCCCGTCAGATCTCCCCGGCCTG s panTro4.chr17 76267123 263 + 82630442 TCCAAGCTTGTCTGCTCTGGCGCATTCAGGGGACCTGGACTGGAGAGAAAAAGCCACCTCGTACGGTTAGTCTGTGGCTCTGTCTGACTTGTGT-CC-------------------CCCGCCGAGGCCCCTCAGTTGTGAGACAGCTGGCTGAGCCTAAGTCCTGGGGCCAGCCCTCTCCCTAGTCTGCTGCAAAGGTAGAAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCGCTCAT------GCCAGACCGCAGGCACTTGCCCGTCAGATCTCCCCGGCCTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67362782 262 + 73212453 TCCAAGCTTGTCTACTCTGGCACATTCAGGGGACCTGGGCTGGAGAGAAAAAGCCACCTCGTACAGTTAGTCTGTGGCTGTGTCCGACTTGTGT-CC-------------------CCCGCCGAGGCCCCTCAGTTGTGAGACAGCTGGCTGAGCCTAAGTCCTGGGGCCAGCCCTCTCCTTAGTCTGTTGCAAAGGTAGGAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCGCTCAC------GCCAGACCGCA-GCACTTGCCCGTCAGATCTCCCCGGCCTG i ponAbe2.chr17 C 0 I 199 s nomLeu3.chr14 3701196 264 - 94967081 TCCAAGCTTGTCTGCTCTGGCACATTGAGGGGACCTGGGCTGAAGAGAAAAAGCCACCTCGTATGGTTAGTCTGTGGCTGTGTCCGACTTGAGTACC-------------------CCCGCCGAGGCCCCTCAGTTGTGACACAGCTGGCGGAGCCTAAGTCCTGGGGCCAGCCCTCTCCCTAGTCTGTTGCAAAGGTGGGAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCGCTCAC------GCCAGACCACAGGCACTTGCCCGTCAGATCTCCCCGGCCTA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74862197 262 + 80904711 TCCACGCTTGTCTGCCCTGGCACATTCAGGGGACCTGGGCTGGAGAGAAAAAGCCACCTCTTATAGTTAGTCTGTGGCTCTGTCTGACTTGTGT-CC-------------------TCCACCGAGGTCCCCCAGTGGTGAGACAGCTGGCTGAGCCTAAGTCCTGGGGCCAGCCCTCTCCCTAGTCTGTTGCAAAGATAGGAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCCCTCAC------GCCA-ACCGCAGGCACTTGCCCGTCAGATCTCCCCGGCCTG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74672276 262 + 80997621 TCCACGCTTGTCTGCCCTGGCACATTCAGGGGACCTGGGCTGGAGAGAAAAAGCCACCTCTTATAGTTAGTCTGTGGCTCTGTCTGACTTGTGT-CC-------------------TCCACCGAGGCCCCCCAGTGGTGAGACAGCTGGCTGAGCCTAAGTCCTGGGGCCAGCCCTCTCCCTAGTCTGTTGCAAAGATAGGAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCCCTCAC------GCCA-ACCGCAGGCACTTGCCCGTCAGATCTCCTCGGCCTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68677635 262 + 74645514 TCCACGCTTGTCTGCCCTGGCACATTCAGGGGACCTGGGCTGGAGAGAAAAAGCCACCTCTTATAGTTAGTCTGTGGCTCTGTCTGACTTGTGT-CC-------------------TCCGCCGAGGCCCCCCAGTTGTGAGACAGCTGGCTGAGCCTAAGTCCTGGGGCCAGCCCTCTCCGTAGTCTGTTGCAAAGATAGGAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCGCTCAC------GCCA-ATCGCAGGCACTTGCCCGTCAGATCTCCCCGGCCTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30728190 262 - 75148670 TCCACGCTTGTCTGCCCTGGCACATTCAGGGGACCTGGGCTGGAGAGAAAAAGCCACCTCTTATAGTTAGTCTGTGGCTCTGTCTGACTTGTGT-CC-------------------CCCGCCGAGGCCCCCCAGTTGTGAGACAGCTGGCTGAGCCTAAGTCCTGGGGCCAGCCCTCTCCCTAGTCTGTTGCAAAGATAGGAAGGCATGCCCAGGCAGGGGCC-ACCTGCCCTGCCCGCTCAC------GCCA-ACCGCAGGCACTTGCCCGTCAGATCTCCCCGGCCTG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126547881 257 + 159171411 TCCAAGCTTGTCTGCTCTGGCACATTCAGGGGACCTGGGCTGGAGAGAAAAAGCCACCTCCTGTAGTTAGTCTGTGGCTCTGTCCGACTC-TAT-CC-------------------CCTGCAGAGGCCTCCCAGTTCTGAGCCAGCCGGCTGAGCCTGAGTCCTGG---CAGCCCTCTCCCTAGTCTGTTGCAGAGGTAGGAAGGCATGCCCAGGGAGGGGCC--CCTGCCCTGCCC-CTTAT------GCCAGACCGCAGGCACTTGCCCACCAGATCTTCCTGGCCTG i calJac3.chr5 C 0 C 0 s canFam3.chr9 57436321 283 - 61074082 TCCAAGCCAATGTGCTCTGGCTCA-GCTCGGGACCTGGGC-AGAGAGACAGAGCTACCTCGTGCACCGAGTC--TAGCCCCGT-GGACTTGTGC-CCAGGACCCTGGGACTCATGGACCCCCGAAGCCCCCCAGTCACGAGCAGGCAGGCTGAGCCTGAGACCCGGAGCCATCCCCCTGGCTGGCCTGTTGCAGGAGTGGGGAGGCAGGCTCGGGCCTGGGCCTGCTCGCGCTTCTATGTGACTGTGTGGCTG-CTCAGAGTCACCTGCTGGCGGCATCTCCCCAGCCAG i canFam3.chr9 I 444 C 0 a score=830211.000000 s hg38.chr17_GL383566v1_alt 77215 254 + 90219 CCCAGAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACCTTCTTCCTGGAAC----CACCCCCCACAAGTGTGACCAGCTCAAGCCAGGACAGGTACAGGGG-GACCCAGGATTGCCACTTAGGGGCAGTGGTCTGGAATCCA-GGTCCAGGT-GACATGGGAGCCAACCCTCTGCTTGGAGATCCCAGGTGGGTGTTTGCAGAGGACATCTCACTTGAGGACC---------------CATGGAA- s panTro4.chr17 76267386 254 + 82630442 CCCAGAGGGGTTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCCACAGTCCACCTTCTTCCTGGAAC----CACCCCCCACAAGTGTGACCAGCTCAAGCCAGGACAGGTACAGGGG-GACCCAGGATTGCCACTTAGGGGCAGTGGTCTGGAATCCA-GGTCCAGGT-GACATGGGAGCCAACCCTCTGCTTGGAGATCCCAGGTGGGTGTTTGCAGAGGACATCGCACTTGAGGACC---------------CATGGAA- i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67363243 253 + 73212453 CCCAGAGGGGTTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACTTTCTTCCTGGGAC----CACCCCCCACAAGTGTGACCAGCTCAAGCCAGGACAGGTAC-GGGG-GACCTAGGATTGCCACTTAGGGGCAGTAGTCTGGAATCCA-GGTTCAGGT-GACATGGGAGCCAACCCTCTGCTTGGAGGTCCCAGGTGGGTGTTTGCAGAGGACATCTCACTTGAGGACC---------------CATGGAA- i ponAbe2.chr17 I 199 C 0 s nomLeu3.chr14 3701460 254 - 94967081 CCCAGAGGGGTTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGTGCATTGCGTTTGCGACAGTCCACCTTCTTCCTGGAAC----CACCCCCCACAAGTGTGACCAGCTCAAGCCAGGACAGGTACAGGGG-GACCCAGGATTGCCACTTAGGGGCAGTGGTCTGGAATCCA-GGTCCAGGT-GACATGGGAGCCAACCCTGTGCTTGGAGGTCCCAGGTGGGTGTTTGCAGAGGACATCTCACTTGAGGACC---------------CAGGGAA- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74862459 254 + 80904711 CCCAGAGGGGTTCTGATAGCTGAGGGCGAGGCACCTGGCAGCGGGGCATTGAGTTTGCGACAGTCCACCTTCTTCCTGGAAC----CGTCCCCCACAAGTGGGACCAACTGAAGCCAGGACAGGCGCAGGGG-GACCCAGGATTGCCACTTCGGGGCAGTGGTCTGGAGTCCA-GGTCCAGGT-GACATGGGAGCCAACCCTCTGCTCGGAGGTCCCAGGTGTGTGTTTGCAGAGGACATCTCACTTGAGGACC---------------CATGGAA- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74672538 254 + 80997621 CCCAGAGGGGTTCTGATAGCTGAGGGCGAGGCACCTGGCAGCGGGGCATTGAGTTTGCGACAGTCCACCTTCTTCCTGGAAC----CGTCCCCCACAAGTGGGACCAACTGAAGCCAGGACAGGCGCAGGGG-GACCCAGGATTGCCACTTCGGGGCAGTGGTCTGGAGTCCA-GGTCCAGGT-GACATGGGAGCCAACCCTCTGCTCGGAGGTCCCAGGTGTGTGTTTGCAGAGGACATCTCACTTGAGGACC---------------CATGGAA- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68677897 254 + 74645514 CCCAGAGGGGTTCTGATAGCTGAGGGCGAGGCACCTGGCAGCAGGGCATTGAGTTTGCGACAGTCCACCTTCTTTCTGGAAC----CGCCCCCCACAAGTGGGACCAACTCAAGCCAGGACAGGCACAGGGG-GACCCAGGATTGCCACTTCGGGGCAGTGGTCTGGAGTCCA-GGTCCAGGT-GACATGGGAGCCAACCCTCTGCTCGGAGGTCCCAGGTGCGTGTTTGCAGAGGACATCTCACTTGAGGACC---------------CATGGAA- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30728452 254 - 75148670 CCCAGAGGGGTTCTGATAGCTGAGGGCAAGGCACCTGGCAGGGGGGCATTGAGTTTGCGACAGTCCACCTTCTTCCTGGAAC----CGCCCCCCACAAGTGGGACCAACTCAAGCCAGGACAGGTGCAGGGG-GACCCAGGATTGCCACTTCGGGGCAGTAGTCTGGAGTCCA-GGTCCAGGT-GACATGGGAGCCAACCCTCTGCTAGGAGGTCCCAGGTGCGTGTTTGCAGAGGACATCTCACTTGAGGACC---------------CATGGAA- i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126548138 247 + 159171411 CCCAGAGGGGTTCTGACAGCTGAGGGCAATGCTCCTGGCAGCGGTGTGTTGAGTTTGCAACAGTCCGCTCTCTTCCTAGGAC----TA-CCCTGACAAGTGTGACCAGCTCAAGCCAGGACAGATGCAGGGG-GA-CGGGGGTTGCCACTTACGGGCAGCGGTCTGGAGTCCA-GGTGCAGGT-GACATGGGGGCCAGCCCTCTGCTTGGAGGTCTCAGGTGGGTGTTTGCAGAGGACGTCTC-----AGGACC---------------CATGGAA- i calJac3.chr5 C 0 M 1105 s canFam3.chr9 57436604 259 - 61074082 CCCCGAGGGGTTCTGAGAGTC--CTGCAAGACACC--------------TGAGTTTGAGGCCGCCCACCTTTTTCCTGGAAATCTGCTCCCCCTCCAAGT--AACCAGTTGGAGGCTGGACAGGTGCAGAGGCGGCATGAGATTGCCCCTCCAGAGCAGAGGCCTAGAGCCCATGACCTAGGTGGACCTGAGGGCGGACTGTGTGCTCAGAGCTCCCAGAAGGGTGTCAGCAGAGGGCATCTCACCTGAGGACCCTGCGACCCCACTAGCAGGGAAA i canFam3.chr9 C 0 C 0 a score=1645636.000000 s hg38.chr17_GL383566v1_alt 77469 624 + 90219 GGGGACACTTCCCACCCCCTACCT--GGTCCTTGGGCTGCCCTCCTCTGACACTCTCCTGCC-----ATCCCAGGCAGCCCTGACAGCCCCATGTGACTGGGACCTAGAGGTGGCCCCT-GTTTCCGCCCCAGTGTTTGTCCACAGGCAGTGTTGCGTGGGCTCTGAAGTTTGCCTAAGATGGACCTGATAAGGGGAGTTCAGTACACATCAGTGCAGGCCCGGCCAGGGGGTGATGA-TGGCAGTTCCTGGGCAGATCCAGC---TGGCTTTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGCCCCTAGGGGTGTGAACCTTTGGGGTGAGGCGGGAAGTGACGCGCTGGGTTCCTGCGCCTCTGTTTGTTGGAGCTATTACCTTGGAAACATCCCAGCTCTAGGCGGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATCCCTG-GGTGAAGCCCTCGGGGCTTGTACACAGCACACAGCGCTGTGGCCCCATGGCTCACTTTGCTGTGTGAAGTGGCTCAGTCTCCGGGAGAGTCCTTAGCCAGGCAGGCCTGACGGCAACTGCCAGGTCATGGTGATCTGGAATCGCTGACCAAAGGGAGTCAGTCCTGGTGGGTGGAGGGACTTGG s panTro4.chr17 76267640 625 + 82630442 GGGGACACTTCCCACCCCCTACCC--AGTCCTTGGGCTGCCCTCCTCTGACACTCTCCTGCCC----ATCCCAGGCAGCCCTGACAGCCCCATGTGACTGGGACCTAGAGGTGGCCCCT-GTTTCCGCCCCAGTGTTTGTCCACAGGCAGTGTTGCGTGGGCTCTGAAGTTTGCCTAAGATGGACCTGATAAGGGGAGTTCAGTACACATCAGTGCAGGCCCGGCCAGGGGGTGATGA-TGGCAGTTCCTGGGCAGATCCAGC---TGGCTTTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGCCCCTAGGGGTGTGAACCTTTGGGGTGAGGCGGGAAGTGACGCGCTGGGTTCCTGCGCCTCTGTTTGTTGGAGCTATTACCTTGGAAACATCCCAGCTCTAGGCGGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATCCCTG-GGTGAAGCCCTCGGGGCTTGTACACAGCACACAGCGCTGTGGCCCCATGGCTCCCTTTGCTGTGTGAAGTGGCTCAGTCTCCGGGAGAGTCCTTAGCCAGGCAGGCCTGACAGCAACTGCCAGGTCATGGTGATCTGGAATCGCTGACCAAAGGGAGTCAGTCCTGGTGGGTGGAGGGACTTGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67363496 625 + 73212453 GGGGACACTTCCCACCCCCTACCC--GGTCCTTGGGCTGCCCTCCTCTGACACTCTCCTGCCC----ATCCCAGGCAGCCCTGACAGCCCCATGTGACTGGGACCTAGAGGTGGCCCCT-GTTTCCGCCCCAGTGTTTGTCCACAGGCAGTGTTGCGTGGGCTCCGAAGTTTGCCTAAGATGGACTTGATAAGGGGAGTTCAGTACACATCAGTGCAGGCCTGGCCTGGGGGTGATGA-TGGCAGTTCCTGGGCAGATCCAGC---TGGCTTTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGTCCCTAGGGGTGTGAACCTTTGGGGTGAGGCGGGAGGTGACGCGCTGGGTTCCTGCGCCTCTGTTTGTTGGAGCTATTACCTTGGAAACGTCCCAGCTCTAGGCGGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATCCCTG-GGTGAAGCCCTTGGGGCTTGTACAGAGCACACAGCGCTGTGGCCCCGTGGCTCACTTTGCTGTGTGAAGTGGCTCAGTCTCCAGGAGAGTCCTTAGGCAGGCAGGCCTGACAGCAACTGCCAGGTCATGGTGATCTGGAATCGCTGACCAAAGGGAGTCAGTCCTGGTGGGTGGAGGGACTTGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3701714 625 - 94967081 GGGGACACTTCCCACCCCCTACCT--GGTCTTTGGGCTGCCCTCCTCTGACACTCTCCTGCCC----ATCCCAGGCAGCCCTGACAGCCCCATGTGACTGGGACCTAGAGGTGGCCCCT-GTTTCCGCCCCAGTGTTTGTCCACAGGCAGTGTTGCGTGGGCTCTGAAGTTTGCCTAAGATGGATATGATAAGGGGAGTTGAGTACACATCAGTGCAGGCCCGGCCTGGGGGTGATGA-TGGCAGTTCCTGGGCAGACCCAGC---TGGCTCTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGCCCCTAGGGGTGTGAACCTTTGGGGTGAGGAGGGAGGTGACGCGCTGGGTTCCTGCGCCTCTGTTTGTTGGAGCTATTACCTTGGAAACGTCCCAGCTCTAGGCGGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATCCCTG-GGTGAAGCCCTCGGGGCTTGTACACAGCACACAGCGCTGTGGCCCAGTGGCTCACTTTGCTGTGTGAAGTGGCTCAGTCTCCAGGAGAGTCCTTAGCCAGGCAGGCCTGACAGCAGCTGCCAGGTCATGGTGATCTGGAATCGCTGACCAAAGGGAGTCAGTCCTGGTGGGTGGAGGGACTTGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74862713 629 + 80904711 GGGGACACTGCCCACCCCCTACCC--GGTCCTTGGGCTGCCCTCCTCTGACACTCTCCTGCCCACCCATCCCAGGCAGCCCTGACAGTCCCACGGGACTGGGACCTAGAGGTGGCCCCT-GTTTCCGCCCCAGTGTTTGTCCACAGGCAGCCTTGCGTGGGCTCTGAAGTTTGCCTAAGATGGACCTGATAAGGAAAGTTCAGTACACATCAGTGCAGGCCCGGCCTGGGGGTGATGA-TGGCAGTTCCTGGGCAGATCCCGC---TGGCTTTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGCCCCTAGGGGTGTGAACCTTTGGGGTGAGGAGGGAGGTGACGCGCTGGGTTCCTGCACCTCTGTTTGTTGGAGCCATTACCTTGGAAACATCCCAGCTCTAGGCAGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATGCCTG-GGTGAAGCCCTCAGGGCTTGTACACAGCACGCAGCTCTGGGGCCCAGTGGCTCACTTCACTGTGTGAAGTGGCTCAGTCTCCGGGAGAGCCCTTAGCCAGGCAGGCCTGACGGCAACTGCCAGGTCATGGTGATCTGGAATCGCTGACCGAAGGGAGTCAGTCACGGTGGGTGCAGGGCCCCGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74672792 629 + 80997621 GGGGACACTGCCCACCCCCTACCC--GGTCCTTGGGCTGCCCTCCTCTGACACTCTCCTGCCCACCCATCCCAGGCAGCCCTGACAGTCCCACGGGACTGGGACCTAGAGGTGGCCCCT-GTTTCCGCCCCAGTGTTTGTCCACAGGCAGCCTTGCGTGGGCTCTGAAGTTTGCCTAAGATGGACCTGATAAGGAAAGTTCAGTACACATCAGTGCAGGCCCGGCCTGGGGGTGATGA-TGGCAGTTCCTGGGCAGATCCCGC---TGGCTTTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGCCCCTAGGGGTGTGAACCTTTGGGGTGAGGAGGGAGGTGACGCGCTGGGTTCCTGCGCCTCTGTTTGTTGGAGCCATTACCTTGGAAACATCCCAGCTCTAGGCGGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATGCCTG-GGTGAAGCCCTCAGGGCTTGTACACAGCACACAGCTCTGGGGCCCAGTGGCTCACTTCACTGTGTGAAGTGGCTCAGTCTCCGGGAGAGCCCTTAGCCAGGCAGGCCTGACGGCAACTGCCAGGTCATGGTGATCTGGAATCGCTGACCGAAGGGAGTCAGTCACGGTGGGTGCAGGGCCCCGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68678151 619 + 74645514 GGGGACACTGCCCACCCCCTACCC--GGTCCTTGGGCTGCCCTCCTCTGACACTCTCCTGCCC-CCCATCCCAGGCAGCCCTGACAGTCCCATGGGACTGGGACCTAGAG----------GTTTCCGCCCCAGTGTTTGTCCACAGGCAGCCTTGCGTGGGCTCCGAAGTTTGCCTAAGATGGACCTGATAAGGAAAGTTCAGTACACATCAGTGCAGGCCTGGCCTGGGGGTGATGA-TGGCAGTTCCCGGGCAGATCCCAC---TGGCTTTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGCCCCTAGGGGTGTGAACCTTTGGGGTGAGGAGGGAGGTGACACGCTGGGTTCCTGCGCCTCTGTTTGTTGGAGCCATTACCTTGGAAACGTCCCAGCTCTAGGCGGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATGCCTG-GGTGAAGCCCTCGGGGCTTGTACACAGCACACAGCTCTGTGGCCCAGTGGCTCACTTCACTGTGTGAAGTGGCTCAGTCTCCAGGAGAACCCTTAGCCAGGCAGGCCTGACGGCAACTGCCAGGTCATGGTGATCTGGAATCGCTGACCAAAGGGAGTCAGTCACGGTGGGTGCAGGGCCCTGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30728706 628 - 75148670 GGGGACACTGCCCACCCCCTACCC--GGTCCTTGGGCTGCCCTCCTCTGACACTCTCCTGCCC-CCCATCCCAGGCAGCCCTGACAGTCCCACGGGACTGGGACCTAGAGGTGGCCCCT-GTTTCCGCCCCAGTGTTTGTCCACAGGCAGCCTTGCGTGGGCTCCGAAGTTTGCCTAAGATGGACCTGATAAGGAAAGTTCAGTACACATCAGTGCAGGCCCGGCCTAGGGGTGATGA-TGGCAGTTCCTGGGCAGATCCAGC---TGGCTTTAGGGTAGGAGGGGCTCCAGAGAGAGGCTCCAGGCCCCTAGGGGTGTGAACCTTTGGGGTGAGGAGGGAGGTGACTCGCTGGGTTCCTGCGCCTCTGTTTGTTGGAGCGATTACCTTGGAAACGTCCCAGCTCTAGGCGGTTGCCAGGGATTTATGGGGATCAGTGGGTGCCAATGCCTG-GGTGAAGCCCTCAGGGCTTGTACACAGCACACAGCTCTGTGGCCCAGTGGCTCACTTCGCAGTGTGAAGTGGCTCAGTCTCCGGGAGAGCCCTTAGCCAGGCAGGCCTGACGGCAACTGCCAGGTCACGGTCATCTGGAATCGCTGGCCAAAGGGAGTCAGCCCTGGTGGGTGCGGGGCCCTGG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57436863 471 - 61074082 AGGGGCTCCCCACACCCCACGCCTCAACGCCTTGGGCAGCC-----CTGAGACTCTCCTGCCC----ATCCCAGGCCGC---------CCCACGCGGCTGGTACCTGTGGGTGGGACCTCGTTTCTGCACTC-TGTTTGTCCCTGCGCAGCGTTGCGTGGGCCGTGCAGTTTGCCTAAGATGTGCTCGATAAGGAAGGTTCAGCACACGGTGGCACAGGGCCCAGCCAGGGGCGAGGAGCGCCAGTTCCTGGGCGGATCCAGCTGGTGGCCTTGGGG--------------GAGGGAGGCCCCAGGCCCC--AGGGCCCGAGCCTCT-GTGTGGGGAGGGAAGTGGC-TGCTGGGCTCCTG--GCTCTCTCTGTTGGGGCTATTATCGTGGC-----------------------CTGGGGACTTGGGGGGATCCACGGGTGC---TGGCTGCAGTGGGGCCCCCTGGGGACCTGCAGAGCCCACG-------GGCCGCAGCGCCCACTGTGCTG-----AGGGCCCGGGTCTCCCAGA-----------------------------------------------------------------------------------------GGGACGTGG i canFam3.chr9 C 0 C 0 e calJac3.chr5 126548385 1105 + 159171411 M a score=471510.000000 s hg38.chr17_GL383566v1_alt 78093 200 + 90219 TGGGCAGCCATCGTGATGCCAGGCATGGGGATCGTGTGTCACCCAGGCCTGTGGGTGCCGAGCTTCTGTGGGAGCAGTGAAGTGCCCCCG---------------------------------------------------------TGGCCGATGGGCTGGTCACCCCTGCCCCTTTCCTGATGTGACAGTTGTGCCTGGGCCCCGGGAAATTTGCCAGGAGGC----CTGGCATTGGCCTGCTCTACTGGAGCGGCCCT s panTro4.chr17 76268265 200 + 82630442 CGGGCAGCCATCGTGGTGCCAGGCATGGGGATCGTGTGTCACCCAGGCCTGTGGGTGCCGAGCTTCTGTGGGAGCAGTGAAGTGCCCCCG---------------------------------------------------------TGGCCGATGGGCTGGTCACCCCTGCCCCTTTCCTGATGTGACAGTTGTGCCTGGGCCCCGGGAAATTTGCCAGGAGGC----CTGGCATTGGCCTGCTCTACTGGAGCGGCCCT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67364121 200 + 73212453 CGGGGAGCCATTGTGATGCCAGGCATGGGGATCGTGTGTCACCCAGGCCTGTGGGTGCCGAGCTTCTGTGGGAGCAGTGAAGTGCCCCCG---------------------------------------------------------TGGCCGATGGGCTGGTCACCCCTGCCCCTTTCCTGATGTGACAGTTGTGCCCGGGCCCCAGGAACTTTGCCAGGAGGC----CTGGCATTGGCCTGCTCTACTGGAGTGGCCCT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3702339 257 - 94967081 TGGGGAACCATCGTGATGCCAGGCATGGGGATCGTGTGGTACCCAGGCCTGTGGGTGCCGAGCTTCTGTGGGAGCAGTGAAGTGCCCCCGTGGCTGATGGGCTGGTCACCCCTGCCCCTTTCCTGATATGACAGTGAAGTGCCCCCATGGCCGATGGGCTGGTCACCCCTGCCCCTTTCCTGATGTGACAGTTGTGCCCGGGCCCCGGGAACTTTGCCAGGAGGC----CTGGCATTGGCCTGCTCTACTGGAGCAGCCCT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74863342 204 + 80904711 TGGGGAGCCATCGTGATGCCAGGCATGGGGATCGTGTGGCACCCAGGCCTGTGGGTGACGAGCTTCTGTGGGGACAGTGAAGTGCCCCCA---------------------------------------------------------TGGCTGATGGGCTGGTCACCTCTGCCCCTTTCCTGATGCAACAGTTGTGCCCATGTCCCGGGAATTTTGCCAGGAGGCCTGGCTGGCATTGGCCTGCTCTACTGGAGCAGCGCT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74673421 200 + 80997621 TGGGGAGCCATCGTGATGCCAGGCATGGGGATCGTGTGGCACCCAGGCCTGTGGGTGACGAGCTTCTGTGGGGACAGTGAAGTGCCCCCA---------------------------------------------------------TGGCTGATGGGCTGGTCACCTCTGCCCCTTTCCTGATGCAACAGTTGTGCCCGTGTCCTGGGAATTTTGCCAGGAGGC----CTGGCATTGGCCTGCTCTACTGGAGCAGCGCT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68678770 200 + 74645514 TGGGGAGCCATCGTGATGCCAGGCATGGGGATCGTGTGGCACCCAGGCCTGTGGGTGACGAGCTTCTGTGGGGACAGTGAAGTGCCCCCA---------------------------------------------------------TGGCTGATGGGCTGGTCACCTCTGCCCCTTTCCTGATGCAACAGTTGTGCCCGTGTCCCGGGAATTTTGCCAGGAGGC----CTGACATTGGCCTGCTCTACTGGAGCGGCCCT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30729334 200 - 75148670 CGGGGAGCCATCGTGATGCCAGGCATGGGGATCGTGTGGCACCTAGGCCTGTGGGTGACGAGCTTCTGTGGGGGCAGTGAAGTGCCCCCA---------------------------------------------------------TGGCTGATAGGCTGGTCACCACTGCCCCTTTCCTGATGCAACAGTTGTGCCCGTGTCCCGGGAACTTTGCCAGGAGGC----CCGGCATTGGCCTGCTCTACTGGAGCGGCCCT i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57437334 0 - 61074082 C e calJac3.chr5 126548385 1105 + 159171411 M a score=285181.000000 s hg38.chr17_GL383566v1_alt 78293 107 + 90219 GCTGAGCTGTGAGCTGCCCGTCTCCCTGAGGTTCCTAGCCCATTTCAACTCTCCATGTGGATTTGGtcattcattccagaagcgtctgccgggcgctgctgagtgtc s panTro4.chr17 76268465 107 + 82630442 GCTGAGCTGTGAGCTGCCCGTCTCCCTGAGGTTCCTAGCCCATTTCAACTCTCCATGTGGATTTGGtcattcattccagaagcgtctgccaggcgctgctgagtgtc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67364321 107 + 73212453 GCTGAGCTGTGAGCTGCCGGTCTCCCTGAGGTTCCTAGCCCATTTCAACTCTCTATGTGGATTTGGTCATTCATTCCAGAAGTGTCTGCCGGGCGCTGCTGAGTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3702596 96 - 94967081 GCTGAGCTGTGAGCTGCCCGTCTCCCTGAGGTTCCTGGCCCATTTCAACTCTCCATGTGGATTTGGTCATTCGTTCCAGAAGCGTCTGCTG-----------GTGTC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74863546 107 + 80904711 GCTGAGCTGTGAGCTGCTTGTCTCCCTGAGGTTCCTAGGCCATTTCAACTCTCCGTGTGGATTTGGTCATTCATTCCAGAATCGTCTGCCGGGTGCCGCTGAGTGTC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74673621 107 + 80997621 GCTGAGCTGTGAGCTGCTTGTCTCCCTGAGGTTCCTAGGCCATTTCAACTCTCCATGTGGATTTGGtcattcattccagaatcgtctgccgggtgccgctgagtgtc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68678970 107 + 74645514 GCTGAGCTGTGAGCTGCTTGTCTCCCTGAGGTTCCTAGGCCATTTCAACTCTCCATGTGGATTTGGTCATTCATTCCAGAAGCATCTGCCGGGCGCTGCTGAGTGTC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30729534 107 - 75148670 GCTGAGCTGTGAGCTGCTTGTCTCCCCGAGGTTCCTAGGCCATTTCAACTCTCCATGTGGATTTGGtcattcattccagaagcgtctgccgggcgctgctgagtgtc i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57437334 104 - 61074082 GCTGAGCAGCGGGGTGCCTGTCTCCCC-AGATTCCTGGCCAGTTTTGACTGTCCCTGTGGGTTCAGCCGCTTATCCCCAGAGCGTCTGC-GGGCGTTGCTGA-TGCC i canFam3.chr9 C 0 C 0 e calJac3.chr5 126548385 1105 + 159171411 M a score=2807282.000000 s hg38.chr17_GL383566v1_alt 78400 885 + 90219 aggttctgtTTGCCTCC-TCTCCTGTACGCTGGAGGCTCTGGGCACCAGCTCTGCAG-GGTGGCCTGGCCTTGGGTCTCCAGGGTAGAGCATGG----CACTCTCTGCTCCCAG-CCCAGTTTCTCTCTGCTTTATCTCCCTGA-CCCCACCCTGGGCATGGGCCCATTTGCAGCCCCTGTGAAGGGAGACATTGAGCTGTTGCTGGCAGAGGAGG-GGCGGCTCCTGGGCA-CTGCTTGCCAATGGCCTCTCGGCAGCTCTGTGACAGCTGAGCTTTGTTCCCAGCCTAATCTGACCTGGTTCTCCAAAGCATGACTGTTGGCAGCCTGAAAACCTCCAGGACAGGAAACAGGAGTGGCGCAGGGAATGTAAGATGATCCCAGCTTCAAGTCACTGGGCGGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGAACTCAAGTCG---------CTGGTCATCCTCAGAGCGGTGTTGGCCCGGGGCCTTCAGTGG-CCTTTGTGTCTGGGTGAGAGGAACCCTGGATGGCCACTCTGCCCTGAGTGTGTGGGTCCCCAGAAGTGCTGGGTTAGGGGGCACGGAGGGCCAGAAAGTCCCCTTTGGAGCGCTGGACTCTCTC-GCTGACTCCTACCCCACCCCGGCCTGGGGTTTCAGAGAAGGGGTCCAGGCAGGAGTGTCATCTTTTCTCAATGGGGA-----TGTGGCTTCAGTCTCTGTCCAGGTGGGTGCATTGCTCTCT------------------TTCCGGC--TCCTCCC--AGGCTGCTTAAATGACCTGTGACGAGGCCTGCGCCATGG--CCGGGGCCCTCTGCTTTTCCCAGCGCTGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGATGTCCCTGAATGCCATGCCTGGGCACCT-GTCCTGGCCAGGCGAGG s panTro4.chr17 76268572 885 + 82630442 aggctctgtTTGCCTCC-TCTCCTGTACCCTGGAGGCTCTGGGCACCAGCTCTGCAG-GGTGGCCTGGCCTTGGGTCTCCAGGGTAGAGCATGG----CACTCTCTGCTCCCAG-CCCAGTTTCTCTCTGCTTTATCTCCCTGA-CCCCACCCTGGGCACGGGTCCCTTTGCAGCCCCTGTGAAGGGAGACATTCAGCTGTTGCTGGCAGAGGAGG-GGCGGCTCCTGGGCA-CTGCTTGCCAATGGCCTCTCGGCAGCTCTGTGACAGCTGAGCTTTGTTCCCAGCCTAATCTGACCTGGTTCTCCAAAGCGTGACTGTTGGCAGCCTGAAAACCTCCAGGACAGGAAACAGGAGTGGCGCAGGGAATGTAAGATGATCCCAACTTCAAGTCACTGGGCGGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGAACCCAAGTCG---------CTGGTCATCCTCAGAGCGGTGTTGGCCCGGGGCCTTCAGTGG-CCTTTGTGTCTGGGTAAGAGGAACCCTGGATGGCCACTCTGCCCTGAGTGTGTGGGTCCCCAGAAGTGCTGGGTTAGGGGGCACGGAGGGCCAGAAAGTCCCCTTTGGAGCGCTGGACTCTCTC-GCTGACTCCTACCCCACCCCGGCCTGGGGTTTCAGAGAAGGGGTCCAGGCAGGAGTGTCATCTTTTCTCAATGGGGA-----TGTGGCTTCAGTCTCTGTCCAGGTGGGTGCATTGCTCTCT------------------TTCCGGC--TCCTCCC--AGGCTGCTTAAATGACCTGTGACGAGGCCTGCGCCATGG--CCGGGGCCCTCTGCTTTTCCCAGCGCTGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGATGTCCCTGAATGCCATGCCTGGGCACCT-GTCCTGGCCAGGCGAGG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67364428 890 + 73212453 AGGCTCTGTTTGCCTCC-TCTGCTGCACCCTGGAGGCTCTGGGCACCAGCTCCGCAG-GGTGGCCTGGCCTTGGGTCTCCAGGGTAGAGCACGG----CACTCTCTGCTCCCAG-CCCAGTTTCTCTCTGCCTTATCTCCCTGA-CCCCACCCTGGGCGCGGGTCCATCTGCAGCCCCTGTGAAGGGAGACATTGAGCTGTTGCTGGCAGAGGAGG-GGCGGCTCCTGGGCA-CTGCTTGCCAATGGCCTCTCGGCAGCTCTGTGACAGCTGAGCTTTGTTCCCAGCCTAATCTGACCTGGTTCTCCAAAGCGTGACTGTTGGCAGCCTGAAAACCTCCAGGACAGGAAACAGGAGTGGCGTAGGGAATGTAAGATGATCCCAGCTTCAAGTCACTGGGCGGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGAACCCAAGTCG---------CTGGTCATCCTCAGAGCAGTGTTGGCCCAGGGCCTTCAGTGG-CCTTTGTGTCTGGGTGAGAGGAACCCTGGATGGCCACTCTGCCCTGAGTGTGTGGGTCCCCAGAAGTGCTGGGTTAGGGGGCACAGAGGGCCAGAAAGTCCCCTTTGAAGCACTGGACTCTCTC-GCTGACTCCTACCCCACCCTGGCCTGGGGTTTCAGAGAAGGGGTCCAGGTAGGAGTGTCATCTTTTCTCAATGGGGATGTGGTGTGGCTTCAGTCTCTGTCCAGGTGGGTGCATTGCTCTCT------------------TTCTGGC--TCTTCCC--AGGCTGCTTAAAGGACCCATAATGAGGCCTGCGCCATGG--CCAGGGCCCTCTGCTTTTCCCAGCGCTGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGACGTCCCTGAATGCCATGCCTGGGCACCT-GTCCTGGCCAGGCCAGG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3702692 891 - 94967081 AGGCTCTGTTTGCCTCC-TCTGCTGCACCCTGGAGGCTCTGGGCACCAGCTCTGCAG-GGTGGCCTGGCCTTGGGTCTCCAGGGTAGAGCATGGCAATCAATCTCTGCTCCCAG-CCCAGTTTCTCTCTGCCTTATCTCCCTGA-CCCCGCCCTGGGTGCAGGTCCATTTGTAGCCCCTGTGAAGGGAGACACTGAGCTCTTGCTGGCAGAGGAGG-GGCGGCTCCTGGGCA-CTGCTTGCCAATGGCCTCTCGGCAGCTCTGTGACAGCTGAGCTTTGTTCCCAGCCTAATCTGACCTGGTTCTCTAAAGCGTGACTGTCGGCAGCCTGAAAACCTCCAGGACAGGAAACAGGAGTGGCGCAGGGAATGTAAGATGATCCCAGCTTCAAGTCACTGGGCGGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGAACCCAAGTCG---------CTGGTCATCCTCAGAGCGGTGTTGGCCTAGGGCCTTCAGTGG-CCTTTGTGACTGGGTGAGAGGAACCCTGGATGGCCACTCTGCCCTGAGTGTGTGGGTCCCCAGAAGTGCTGAATTAGGGGGCACGGAGGGCCAGAAAGTCCCCTCTGGAGCATTAGACTCTCTC-GCTGACTCCTACCCCACCCTGGCCTGGGGTTTCAGAGAAGGGGTCCAGGTAGTAGTGTCATCTTTTCTGAATGGGGA-----TGTGGCTTCAGTCTCTGTCCAGGTGGGAGCATTGTTCTCT------------------TTTTGGC--TCCTCCCCAGGGCTGCTTAAAGGACCCGTGATGAGGCATACGCCATGGGCCGGGGGCCTTTTGGTTTTCCCAGCG-TGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGATGTCCCTGAATGCCAT-CCTGCACACCT-GTCCTGTCCAGGCCAGG i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74863653 896 + 80904711 AGGCTCTGTTTGCCTCC-TCTGCTGCACCCTGGAGGCTCTGGGCACCAGCTCTGCAG-GGTGGCCTGGCCATGGGTCTCCAGGGTAGAGCATGG----CACTCTCTACTCCCAG-CCCAGTTTCTCTCTGCC-TATCTCCCTGA-CCCCACCCCGGGTGCAGGTCCATTCGCAGCCCCTGGGAAGGGAGTCATTGAGCTGTTGCTGGCAGGGGA-G-GGCGGCTCCCAGGCA-CTGCTTACCAATGGCCTCTCCGCAGCTCTGTGACAGCTGAGCTTTGTTCTCAGCCTAATCTGACCTGGTTCTCCAAAG-CTGACTGTTGGCAGCCTGAAAACCTCCAGGACAGGAAACAGGAGTGGCGCAGGGAATGTAAGATGATCCCAGCTTCAAGTCACTGGGCCGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGTACCCAAGTCG---------CTTGTCATCCTCAGAGCAGTGTTGGCCCCGGGCCTTCAGTGG-CCTTTGTGTCGGGGTGAGAGGAGCCCTGGATGGCCACTCTGCCCTGGGTGTGTGGGTCCCCAGAAGTGCTGGGTTAGGGGGCACAGAGGGCCAGAAA---CGCTCTGGAGCACTGGACTCTCTC-GCTGACTCCTACCCCACCCTGGCCTGGGGTTTCAAAGAAGGGGTCCAGGCAGGAGTGCCATCTTTTCTCAATGGGGA-----TGTGGCTTCAGTCTCTGCCCAGGTGGGTGCGTTGCTCTCTGTCTGGCT-CCTAAAGAGGTCTGGC--TCCTCGC--AGGCTGCGGAAAGGACCTGTGATGAGGCCTATGCCCTGG--CCGGGGCCCTCTGCTTTTCCCAGTGCTGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGACGTCCCTGAATGCCATGCCTGGGCACCT-GTCCTGGCCAGGCCAGG i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74673728 896 + 80997621 aggctctgtTTGCCTCC-TCTGCTGCACCCTGGAGGCTCTGGGCACCAGCTCTGCAG-GGTGGCCTGGCCATGGGTCTCCAGGGTAGAGCATGG----CACTCTCTACTCCCAG-CCCAGTTTCTCTCTGCC-TATCTCCCTGA-CCCCACCCCGGGTGCAGGTCCATTCGCAGCCCCTGGGAAGGGAGTCATTGAGCTGTTGCTGGCAGGGGA-G-GGAGGCTCCCAGGCA-CTGCTTACCAATGGCCTCTCCGCAGCTCTGTGACAGCTGAGCTTTGTTCTCAGCCTAATCTGACCTGGTTCTCCAAAG-CTGACTGTTGGCAGCCTGAAAACCTCCAGAACAGGAAACAGGAGTGGCGCAGGGAATGTAAGATGATCCCAGCTTCAAGTCACTGGGCCGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGTACCCAAGTCG---------CTTGTCATCCTCAGAGCAGTGTTGGCCCCGGGCCTTCAGTGG-CCTTTGTGTCAGGGTGAGAGGAGCCCTGGATGGCCACTCTGCCCTGGGTGTGTGGGTCCCCAGAAGTGCTGGGTTAGGGGGCACAGAGGGCCAGAAA---CGCTCTGGAGCACTGGACTCTCTC-GCTGACTCCTACCCTACCCTGGCCTGGGGTTTCAAAGAAGGGGTCCAGGCAGGAGTGCCATCTTTTCTCAATGGGGA-----TGTGGCTTCAGTCTCTGCCCAGGTGGGTGCGTTGCTCTCTGTCTGGCT-CCTAAAGAGGTCTGGC--TCCTCCC--AGGCTGCGGAAAGGACCTGTGATGAGGCCTATGCCCTGG--CCGGGGCCCTCTGCTTTTCCCAGTGCTGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGACGTCCCTGAATGCCATGCCTGGGCACCT-GTCCTGGCCAGGCCAGG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68679077 906 + 74645514 AGGCTCTGTTTGCCTCC-TCTGGTGCACCCTGGAGGCTCTGGGCACCAGCTCTGCAG-GGTGGCCTGGCCGTGGGTCTCCAGAGTGGAGCATGG----CACTCTCTACTCCCAG-CCCAGTTTCTCTCTGCC-TATCTCCCTGA-CCCCACCCCGGGTGCAGGTCCATTCACAGCCCCTGGGAAGGGAGTCATTGAGCTGTTGCTGGCAGGGGA-G-GGCGGCTCCCAGGCA-CTGCTTACCAATGGCCTCTCCGCAGCTCTGTGACAGCTGAGCTTTGTTCTCAGCCTAATCTGACCTGGTTCTCCAAAGCCTGACTGTTGGCAGCCTGAAAACCTCCAGGACAGGAAACAGGAGTGGCGCAGGGAATGTAAGATGATCCCAGCTTCAAGTCACTGGGCGGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGAACCCAAGTCGCTTGTCATCCTTGTCATCCTCAGAGCAGCGTTGGCCCCGGGCCTTCAGTGG-CCTTTGTGTCGGGGTGAGAGGAACCCTGGATGGCCactcttctctgtgtgtgtgggtcCCCAGAAGTGCTGGGTTAGGGGGCGCAGAGGGCCAGAAA---CGCTCTGGAGCACTGGACTCTCTC-GCTGACTCCTACCCCACCCTGGCCTGGGGTTTCAGAGAAGGGGTCCAGGCAGGAGTGCCATCTTTTCTCAATGGGGA-----TGTGGCTTCAGTCTCTGCCCAGGTGGGTGCATTGCTCTCTGTCTGGCT-CCTAAAGAGGTCTGGC--TCCTCCC--AGGCTGTGGAAAGGACCTGTGATGAGGCCTATGCCATGG--CCGGGGCCCTCTGCTTTTCCCAGTGCTGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGACGTCCCTGAATGCCATGCCTGGGCACCT-GTCCTGGCCAGGCCAGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30729641 892 - 75148670 aggctctgtTTGCCTCC-ACTGCTGCACCCTGGAGGCTCTGGGCACCAGCTCTACAG-GGTGGCCTGGCCGTGGGTCTCCAGGGTAGAGCATGG----CACTCTCTACTCCCAG-CCCAGTTTCTCTCTGCC-TATCTCCCTGA-GCCCACCCTGGGCGCAGGTCCATTCGCAGCCCCTGTGAAGGGAGACGTTGAGCTGTTGCTGGCAGGGGA-G-GGCGGCTCCCGGGCA-CTGCTTACCAATGGCCTCTCCGCAGCTCTGTGACAGCTGAGCTTTGTTCTCAGCCTAATCTGACCTGGTTCTCCAAAGCCTGACTGTTGGCAGCCTGAAAACCTCCAGGACAGGAAACAGGAGTGGCGCAGGGAATGTAAGATGATCCCAGCTTCAAGTCACTGGGCGGCCCTTAGACCCAGGCTGCCTGCTGTCTCTGGCAGGAACTCAAGTCA---------CTTGTCATCCTCAGAGCAGTGTTGGCCCAGGGCCTTTAGTAG-CCTTTGTGTCTGGGTGAGAGGAACCCTGGATGGCCACTCTGCCCTGAGTGTGTGGGTCCCCAGAAGTGCTGGGTTAGGGGGCACAGAGGGCCAGAAA--------TGGAGCACTGGACTCTCTC-GCTGACTCCTACCCCACCCTGGCCTGGGGTTTCAGGGAAGGGGTCCAGGCAGGAGTGCCATCTTTTCTCAATGGGGA-----TGTGGCTTCAGTCTCTGCCCAGGTGGGTGCATTGCTCTCTGTCTGGCT-CCTAAAGAGGTCTGGC--TCCTCCC--AGGCTGCTGAAAGGACCTGTGATGAGGCCTATGCCATGG--CCGGGGCCCTCTGCTTTTCCCAGTGCTGCACCTGGGAACCAGGGGTTGGGCCCCGGAAGCCGAGGACGTCCCTGAATGCCATGCCTGGGCACCT-GTCCTGGCCAGGCCAGG i chlSab2.chr16 C 0 C 0 s calJac3.chr5 126549494 899 + 159171411 AAGCTCTGTTTGCCTCCTTCTGCTGCCCCCTGGGAGC-CTCGGCACCAGCTATGCAGAGGTGGCTTGGCTTTGAGTGTACAGGATAGTGTGTGG----CACTCTCTGCTCCCAGCCCCCATTTCTCTCTGCCTTATCTCCCTGACCCCCACCCTGGGCCCAGGTCCATTTGCAGCCCCTGTGAAGGGGGACATTGAGCTGTTGCCAGCAGAGGAGG-GGCGGCTCCGTGGCA-CTGCTTGCCAGTGGCTTCTTGGCAGCTCTGCGACAGCTGAGCTTTGTTTCCAGCCTAATCTGACCTGGTTCTCCAAAGCATAACTGTTGGCAGCCTGAAAACCTCCAGGACAGGAAATGGGAGCGGCACAGGGAATGTAACATGATCCCTGCTTCAGGTTGCTGGGCGGCCCTT--GCCCAGACTGTGTCCTCTGTCTGGCAGGAACCCAAGTTG---------CTGGTCATCCTCAGAG-AGTGTTGGCCCGGGGCCTTCAGTGGCCCTTTGTGTCTAGGTGAGAGGAACCCTGGGTGGTCACTCTGCCCTGAGTGTGTGGGTCCCCAGAAGTGCTGGGTTAGGGGATGTGAAGGGCCAGAAAGTCCCCTCTGGAGCATCGGACTCACTT-GCTGACT--TACCCGACCCTGGCCTTGGGTTTCAGAGGAGGGGTCTAGGTGGGAGTGTCATCTTTTCTCAGTGGGGA-----TGTGGCTTCAGACTCTGTCCAGGTGGGTGCACTGCTCTCTTTCTGGCT-CCTAGAG--GTCTGGT--TCCTCCC--AGGCTGCTTCAAGGGCCTGTGATGAGGCATACGCCGTGG--CCAGGGCCCTCTGTTTTCCCCAGCACTGCACCTGGGAACCAGGGGTTGGGTCCTAGAAGCCGAGGAGGTCCCTGAATGCCATGCCTCAGCCCCT-GTCCTTGCTGTGCCAgg i calJac3.chr5 M 1105 N 0 s canFam3.chr9 57437438 769 - 61074082 AGGCTCTG--AGCGTCC-T-TCCTACACGCTGGTGGCTCCGCG----------GAAA-GGTGGCCTGCCCTTGGGTCTCCAAGGTTGAGTGTGG----CACTC----CGCGCGG-CCCGGTTTCTCTCTGCCTTATCTCCGTGT-CCCCG-CCGGGGCCCGGGTCTATT-GCAGGCTGCGTGAAGGGGGGCATTGAGCTGCGGCCGGCGGAGGGGGTGGCGGCTCCCGGGCGTCTTGCTGTCAGTGGCCTTTTGGAAGCTCTGCGACAACTGCGCTTTGTTCCCGGCCTAATCTGACCTGGTTCTCTGAAGCGTGACTGCTGGCAGCCTGCGAGCCTCCAGGACAGGAAAAGGGGCAGCGGCAGGGAGAGGAAGATGATC-------CGGGTCGCAGGGTGGCCCTCGAGCCCCAGCTCCCTGTCTGCTGCAGCAGGAGCGCATGTCACATGTCCT-CTGGTCCTCCTCCAAGCAATGCGGGCTGCAGGCC-CCAGCCC-CC---------------------------------------------ATGTGTGGGCCCCTCAAAGTGCTGGGT---GGGGAGAGGAGGGCCTCTGT---CCTGCTGG-----CGGACTCCCCCTGGAGAGTCGTGTCTTCTGTTGGCCTAGGGCTTCAGAGT-GGGGCCGAGATAGGAG--------------GATGGGGC-----GGGAGCTT------------------GTCCACTGTCCTCTCTCTGGCTGCCGGACGGGCTGTGGTCATCCCCAT--GGGTGGCTTAAGGGGCGGGCAGTGCCACCGAGGCTGTGG--CTGGG-------------------------CCTGGGAACGGGGGTGCTGGTCCCAT-------GGAAGTCCCCGCGAGCTGTGCCAGGGCCCCTCGTCCCGGCCGCGCCAGG i canFam3.chr9 C 0 C 0 a score=1849585.000000 s hg38.chr17_GL383566v1_alt 79285 672 + 90219 CGTGTTGGGGCAGCGGCTGAGATGGGAGCAGCAGCATTGCCTGCCAGGTTTGAGATGGGCCCCGGGTGAGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCGGGTGGGCCGCCCCTGGGGCCTTGTTCCGCAGATCAACCTGATCCGCACCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCATGAACTATGGCTCCTGTTTCCATCCCAAATCAGATCCCAGAAGAGGAATAATGTCCATGTAACCCAAGCCAGTTGGAAGTGGGTTACATCCAACCCCTGTCATCTTCCAGCTTGTTAAGGACTTGACTAACTCAACCCAGAGGGATTTGGAGGGTTGTCTGCAAAACCCACTAATAACA-GGGAACTTTAGCTCTGTAGCCACAGGGTCTA---CAGAGGTGTCG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGCGTAGACACCATGGAGGCACCGGTAGTGGAA-GAGCTGCAAGTGCACACAGAGGCCGGCACCGAGGGG-CGGGGAGGAGGAGGTGGTGGATTTCTCGCCAGTGTTGGCATCAT-GTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTTGGC-TGGGGCGATGAGTCAT--TGGATAGCAGAGCCTTCCTGGTAGCT-GGGGGTTAACGCTTTAACTGCCGGGACTTTGTAT s panTro4.chr17 76269457 672 + 82630442 CGTGTTGGGGCAGCGGCTGAGATGGGAGCAGCAGCATTGCCTGCCAGGTTTGAGATGGGCCCTGGGTGAGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCAGGTGGGCCGCCCCTGGGGCCTTGTGCCGCAGATCAACCTGATCCGAACCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCATGAACTATGGCTCCTGTTTCCATCCCGAATCAGAGCCCAGCAGAGGAATAATGTCCATGTAACCCAAGCCAGTTGGAAGTGGGTTACATCCAACCCCTGTCATCTTCCAGCTTGTTAAGGACTTGACTAACTCAACCCAGAGGGATTTGGAGGGTTGTCTGCAAAACCCACTAATAACA-GGGAACTTTAGCTCTGTAGCCACAGGGTCTA---CAGAGGTGTCG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGCGTAGACACCATGGAGGCACCGGTAGTGGAA-GAGCTGCAAGTGCACACAGAGGCCGGCACCGAGGGG-CGGGGAGGAGGAGGTGGTGGATTTCTCGCCAGTGTTGGCATCAT-GTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTTGGC-TGGGGCGATGAGTCAT--TGGATAGCAGAGCCTTCCTGGTAGCT-GGGGGTTAACGCTTTAACTGCCAGGCCTTTGTAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67365318 672 + 73212453 CGTGTTGGGGCAGTGGCTGAGATGGGAGCAGCAGCATTGCCTGCCAGGTTTGAGATGGGCCCCGGGTGAGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCGGGTGGGCCGCCCCTGGGGCCTTGTGCCGCAGATCAACCTGATCCGCACCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCGTGAACTATGGCTCCTGTTTCCATCCCAAATCAGATCCCAGGAGAGGAATAATGTCCATGTAACCAAAGCCACTTAGAAGTGGGTTACATCCAACCCCTGTCATCTTCCAGCTTGTTAAGGACTTGACTAACTCAACCCAGAGGGATTTGGAGGGTTGTCTGCAAAACCCACTAATAACA-GGGAACTTTAGCTCTGTAGCCACAGGATCTA---CAGAGGTGTTG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGCGTAGACACCATGGAGGCACCGGTAGCGGAA-GAGCTGCAAGTGCACACAGAGGCCGGCATCGAGGGG-TGGGGAGGAGGAGGTGGTGGGTTTCTCGCCAATGTTGGCATCAC-GTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTCGGC-TGGGGCGATGAGTCAT--TGGATAGCAGAGCCTTCCTGGTAGCT-GGGGGTTAACGCTTTAACTGCCAGGCCTTTGTAT i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3703583 675 - 94967081 CGTGTTGGGGCAGCAGCTGAGATGGGAGCAGCAGCATTGCCTGCCAGGTTTGAGATGGGCCCTGGGTGAGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCAGGTGGGCCGCCCCCGGGGCCTTGTGCCGAAGATCAACCTGATCCGCACCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCGTGAACTATGGCTCCTGTTTCCATCCCAAATCAGATCCCAGGAGAGGAATAATGTCCATGTAACCCAAGCCACTTGGAAGTGGGTTACATCCAACCCTTGTCATCTTCCAGCTTGTTAAGGACTTGACTAACTCAACCCAGAGGGATTTGGAGAGTTGTCTGCAAAACCCACTAATAACA-GGGAACTTTAGCTCTGTAGCCACAGGGTCTA---CAGAGGTGTCG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGCGTAGACACCATGGAGGCACCAGTGGTGGAACCAGCTGCAAGTGCACACACAGGCTGGCATCGAGGGG-TGGGGAGGAGGAGGTGGTGGATTTCTCGCCAATGTTGGCATCACGGTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTAGGCGGGGGGCGATGAGTCAC--TGGATAGCAGAGCCTTCCTGGTAGCT-GGGGGTTAACGCTTTAACTGCCAGGCCTTTGTAT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74864549 668 + 80904711 CGTGTTGGGGCAGCGGCTGAGATGGGAGCAGCAGCGTTGCCTGCCAGGTTTGAGATGGGCCCCGGGTGCGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCGGGTGGGCCGCCCCC-GGGCCTTGTGCGGCAAATCAACCTGATCCTCATCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCGTAAACTATGGCTCCTGTTTCCATCCCAAATCAGATCCCAGCAGGGGAATAATGTCCGTGTAACCCAAGCCACTTGGAAGTGGGTTAAATCCAACCCCTGTCATCTTCCAGCTTGTTGAGGACTTGACTAACTCAACCCAGAGGGATTTGGAGGGTTGTCTGCAAAACCCACTAATAACA-GGGGACTTCAGCTCTGTAGCCACAGGGTCTA---CAGAGGTGTCG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGTGTAGACACCGTGGAGGCACCGGTCGTGGAA-CAGCTGCAAGTGCACACAGAGGCCGGCATCGAGGGG-TGGGGAGGAGGA---GGTGGATTTCTCGCCAATGTTGGCATCAT-GTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTCGGC-TGGGGTGATGAGTCAT--TGGATAACAGAGCCTTCCTGGTAGCT-GGGGGTTAACGCTTTAACTGCTAGGCCTTTGTAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74674624 668 + 80997621 CGTGTTGGGGCAGCGGCTGAGATGGGAGCAGCAGCGTTGCCTGCCAGGTTTGAGATGGGCCCCGGGTGCGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCGGGTGGGCCACCCCC-GGGCCTTATGCAGCAAATCAACCTGATCCTCATCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCGTAAACTATGGCTCCTGTTTCCATCCCAAATCAGATCCCAGCAGGGGAATAATGTCCGTGTAACCCAAGCCACTTGGAAGTGGGTTACATCCAACCCCTGTCATCTTCCAGCTTGTTGAGGACTTGACTAACTCAACCCAGAGGGATTTGGAGGGTTGTCTGCAAAACCCACTAATAACA-GGGGACTTCAGCTCTGTAGCCACAGGGTCTA---CAGAGGTGTCG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGTGTAGACACCGTGGAGGCACCGGTCGTGGAA-CAGCTGCAAGTGCACACAGAGGCCGGCATCGAGGGG-TGGGGAGGAGGA---GGTGGATTTCTCGCCAATGTTGGCATCAT-GTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTCGGC-TGGGGTGATGAGTCAT--TGGATAACAGAGCCTTCCTGGTAGCT-GGGGGTTAACGCTTTAACTGCTAGGCCTTTGTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68679983 668 + 74645514 CGTGTTGGGGcagtggctgagatgggagcagCAGCGTTGCCTGCCAGGTTTGAGATGGGCCCCGGGTGCGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCGGGTGGGCCGCCCCC-GGGCCTTGTGCGGCAGATCAACCTGATCCGCATCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCGTAAACTATGGCTCCTGTTTCCATCCCAAATCAGATCCCAGCAGGGGAATAATGTCCGTGTAACCCAAGCCACTTGGAAGTGGGTTACATCCAACCCCTGTCATCTTCTAGCTTGTTAAGGACTTGACTAACTCAACCCAGAGGGATTTGGAGGGTTGTCTGCAAAACCCACTAATAACA-GGGGACTTCAGCTCTGTAGTCACAGGGTCTA---CAGAGGTGTCG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGCGTAGACACCGTGGAGGCACCGGTCGTGGAA-CAGCTGCAAGTGCACACAGAGGCCGGCATCGAGGGg-tggggaggcgga---ggtggatTTCTCGCCAATGTTGGCATCAT-GTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTCGGC-TGGGGTGATGAGTCAT--TGGATAACAGAGCCTTCCTGGTAGCT-GGGGGTTAACGCTTTAACTGCTAGGCCTTTGTAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30730533 668 - 75148670 CGTGTTGGGGCAGCGGCTGAGATGGGAGCAGCAGCGTTGCCTGCCAGGTTTGAGATGGGCCCCGGGTGCGTGTGGTTACCAGGAAGGGCTGGGCA-GAGCAGGCGGGTGGGCCGCCCCC-GGGCCTTGTGCGGCAGATTAACCTGATCCTCATCCTGGGGCCGGGGCTTCCTTTCACAGCCTTCCCATAAACTATGGCTCCTGTTTCCATCCCAAATCAGATCCCAGCAGGGGAATAATGTCCGTGTAACCCAAGCCACTTGGAAGTGGGTTACATCCAACCCCTGTCATCTTCCAGCTTGTTAAGGACTTGACAAACTCAACCCAGAGGGATTTGGAGGGTTGTCTGCAAAACCCACTAATAACA-GGGGACTTCGGCTCTGTAGCCACAGGGTCTA---CAGAGGTGTCG------GGCTGTCGGGTTATTGCTGGGAGGTGAGCCGGTGGTGTAGACACCATGGAGGCACCGGTCGTGGAA-CAGCTGCAAGTGCACACAGAGGCCGGCATCGAGGGG-TGGGGAGGAGGA---GGTGGATTTCTCGCCAATGTTGGCATCAT-GTTGCCTCCAGCATCAGAGACCCAAGGTGTGGCTGACCTCGGC-TGGGGTGATGAGTCAT--TGGATAACACAGCCTTCCTGGTAGCT-GGAGGTTAACGCTTGAACTGCTAGGCCTTTGTAT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57438207 597 - 61074082 CGTGTCGGGGCAGCAGCTGTG----------------TGC---CCGGGCTGGAGACGGCTCCTGGG-GAGTGTGGTTACCGGGAGGGGCCGGGCAGGGGCAGGCTGGCAGGCCGCCT---GGGGCTTGGCCTGCACCCCTACCTGACCCGCATCCTGGGG----------CTTTCACAGAATTCCCATGGACCGGGCCTCCTGTTTCCACCCAGGATCAGATCCCGGTGGGAGAATAATGCTCCTGTAACCGAAGCCACTTGGAAGTGGGTTAAATCCAACCCCTGTTGTCTTCTAACCTGTTAAGGACCTGACTAA-TCAACCCGGAGGGATTTGGGGGTTAGTTTGCAAAACGCTGTAATAGAACCATGACTTGGGTTCTGTAGCCACAGGTTCAAACCTGTGGGTGTCGAGGGGCAGGTGTTGGACTGTTGTACAGAGGTGAGCCAGT---GTAGACGCTGCAGGG-----------GACA-CAGGTGGTGGTGCTCACAGCGG-GGGCGCTGTGAGGCCGGAGAGGGGGAGGGGGCGGGCGTCTGGCCGAGGTGGAC------------------------------------------CCTCCGC-CGCGCGGGCGAGTCATTCTGGATGGCAGCGCCTTCCTGGCAGCCGGGGGGCTGGCGCTTCAGCAGCCAGACCTTTGCAT i canFam3.chr9 C 0 I 13 a score=413854.000000 s hg38.chr17_GL383566v1_alt 79957 183 + 90219 TATGCCGCTTCTtttt----------ttt------gttttgtttggtttggtttggtttggtttttgagacggagtctcactctgtcacccaggctggagtgtggtggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacgcgc s panTro4.chr17 76270129 187 + 82630442 TATGCCGCTTCTTTTT----------ttttgtttggtttggtttggtttggtttggtttggtttttgagacggagtctca--ctgtcacccaggctggagtgtggtggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacgcac i panTro4.chr17 C 0 I 1802 s ponAbe2.chr17 67365990 183 + 73212453 TATGCTGCTTCTTTgt----------ttt------gttttgtttggtttggtttggtttggtttttgagacggagtctcactctgtcacccaggctggagtgcagtggctcaatcttggctcactgcaacctgtgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacgcgc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3704258 178 - 94967081 TATGCTGCTTCttttt----------ttt-----------gtttggtttggtttggtttggtttttgagatggagtctcactctgtcgcccaggctggagtgcagtggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagccccctgaatagctgagattacaggcacgcgc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74865217 178 + 80904711 TATGCTGCTTCttttg----------ttt-----------gttttgttttgttttattttgtttttgagatgcagtctcactctgttgcccaggctggagtgcagtggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacgcgc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74675292 178 + 80997621 TATGCTGCTTCttttg----------ttt-----------gttttgttttgttttattttgtttttgagatgcagtctcactctgttgcccaggctggagtgcagtggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacgcgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68680651 178 + 74645514 TATGctgcttcttttg----------ttt-----------gttttgttttgttttattttgtttttgagatggagtctcactccgttgcccaggctggagtgcagtggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacatgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731201 188 - 75148670 TATGCTGCTGCttttgtttgttttgtttt-----------gttttgttttgttttattttgtttttgagatgcagtctcactctgtcacccaggctggagtgcaatggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacgcgc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57438804 13 - 61074082 I a score=310925.000000 s hg38.chr17_GL383566v1_alt 80140 135 + 90219 caccatgcctggctaatttttgtatttttagtagagatggggtttcgccatgttggccgggttggtttcaaactcctgacctcaggtgatccacctgccccggcctcccaaagtgctgggattacaggcatgagc s panTro4.chr17 76272118 134 + 82630442 caccatgcccggctaa-ttttgtatttttagtacagacggggtgtccccacgttggtcaggctggtctcgaactcctgacctcaggtgatccgcccgccttggcctcccaaagtgctaggattacaggcgtgagc i panTro4.chr17 I 1802 T 245 s ponAbe2.chr17 67366173 135 + 73212453 caccatgctcggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtttcaaactcatgacctcaggtgatccacccgccccggcctcccaaagtgctgggattacaggcatgagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3704436 135 - 94967081 caccatgcctggctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtttcaaactcctgacctttggtgatccacccgccctggcctcccaaagtgctgggattacaggcatgagg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74865395 134 + 80904711 ccccatgcccggctaatttttgtatttttagtagagat-gggtttcaccatgttggccaggctggtttcaaactcctgacctcaggtgatcctcccgtcccagcctcccaaagtgctgggattacaggcgtgagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74675470 134 + 80997621 ccccatgcccggctaatttttgtatttttagtagagat-gggtttcaccatgttggccaggctggtttcaaactcctgacctcaggtgatcctcccgtcccagcctcccaaagtgctgggattacaggcgtgagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68680829 134 + 74645514 caccatgcccggctaatttttgtatttttagtagagat-gggtttcaccatgttggccaggctggtttcaaactcctgacctcaggtgatccacccgccccggcctcccaaagtgctgggattgcaggcatgagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731389 134 - 75148670 ccccatgcccggctaatttttatatttttagtagagat-gggtttcaccatgttggccaggctggtttcaaactcctgacctcaggtgatcctcccgtcccagcctcccaaagtgctgggattacaggcgtgagc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57438804 13 - 61074082 I a score=21673.000000 s hg38.chr17_GL383566v1_alt 80275 13 + 90219 taccgcgcccagc s ponAbe2.chr17 67366308 13 + 73212453 cactgtgcccagc i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3704571 13 - 94967081 cactacgcccggc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74865529 13 + 80904711 caccacgcccagc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74675604 13 + 80997621 caccacgcccagc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68680963 13 + 74645514 caccgcgcccagc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731523 13 - 75148670 caccacgcccagc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57438804 13 - 61074082 I e panTro4.chr17 76272252 245 + 82630442 T a score=46210.000000 s hg38.chr17_GL383566v1_alt 80288 53 + 90219 TTGCATTTATGC----ttttttttttttttttttgagatggagtttcgctcttgttg s ponAbe2.chr17 67366321 42 + 73212453 tTGCATTTATGC--------ttttttttttttttgagatggagtttcgct------- i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74865542 47 + 80904711 TTGCA-TTATGC---------tttttttttttttgagatggggtttcgctcttgttg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74675617 46 + 80997621 TTGCA-TTATGC----------ttttttttttttgagatggagtttcgctcttgttg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68680976 56 + 74645514 ttgca-ttatgcttttttttttttttttttttttgagatggagtttcactcttattg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731536 46 - 75148670 TTGCA-CTATGC----------ttttttttttttgagatggagtttcgctcttgttg i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3704584 0 - 94967081 C e canFam3.chr9 57438804 13 - 61074082 I e panTro4.chr17 76272252 245 + 82630442 T a score=13076.000000 s hg38.chr17_GL383566v1_alt 80341 7 + 90219 cccaggc s panTro4.chr17 76272007 7 + 82630442 cccaggc i panTro4.chr17 T 245 C 0 s ponAbe2.chr17 67366363 6 + 73212453 -ccaggc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74865589 7 + 80904711 cccaggc i rheMac3.chr16 C 0 M 881 s macFas5.chr16 74675663 7 + 80997621 cccaggc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68681032 7 + 74645514 tccaggc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731582 7 - 75148670 cccaggc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3704584 0 - 94967081 C e canFam3.chr9 57438804 13 - 61074082 I a score=128467.000000 s hg38.chr17_GL383566v1_alt 80348 104 + 90219 tggagtgcaaaggcgcgatctcagctcactgcaacctccacctcccgggttcaagcgattctcttgcctcagcctcccaagtagctgggattacaggcctgcgt s panTro4.chr17 76272014 104 + 82630442 tggagtgtggtggctcaatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgaatagctgggattacaggcacgcac i panTro4.chr17 C 0 T 1802 s ponAbe2.chr17 67366369 104 + 73212453 tggagtgcaaaggtgtgatctcagctcactgcaacctccacctcccgggttcaagcgattctcttgcctcagcctcccaagtagctgggattacaggcctgcat i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 74675670 104 + 80997621 tggagtgtaatggcgcgatctcagctcactgcaacctccgcctcctgggttcaagcgattctcttacctcagcctcccaagtagctgggattacaggcctgcgt i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68681039 104 + 74645514 tggagtgcaatggcgcgatctcagctcactgcaacctccgcctcctgggttcaagtgattctcttgcctcagcctcccaagtagctgggattacaggcctgcat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731589 104 - 75148670 tggagtgcaatggcgtgatctcagctcactgcaacctccgcctcctgggttcaagtgattcttttgcctcagcctctcaagtagctgggattacaggcctgtgt i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3704584 0 - 94967081 C e canFam3.chr9 57438804 13 - 61074082 I e rheMac3.chr16 74865596 881 + 80904711 M a score=206507.000000 s hg38.chr17_GL383566v1_alt 80452 163 + 90219 caccatgcccggctaattttgtatttttagtacagacggggtgtccccatgttggtcaggctggtctcgaa---------------ctcccgacctcaggtgatccgcccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccTATGCTTTTTATTAT s panTro4.chr17 76270316 163 + 82630442 caccatgcccggctaattttgtatttttagtacagacggggtgtccccacgttggtcaggctggtctcgaa---------------ctcctgacctcaggtgatccgcccgccttggcctcccaaagtgctaggattacaggcgtgagccgccgcacccggccTATGCtttttattat i panTro4.chr17 T 1802 C 0 s ponAbe2.chr17 67366473 178 + 73212453 caccatgcccggctaatgttgtatttttagtacagatggggcgtccccatgttggtcaggctggtctcgaagtcctgacctcaggtgtcccgacctcaggtgatctgcccgccttggcctcccaaagtgctggaattacaggcgtgagccaccgcacctggccTATGCtttttattat i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 74675774 162 + 80997621 caccatgcccagctaattttgtatttttagtgtagatggggtgtccccatgttggtcaggctggtctcgaa---------------ctcccaacctcagatgatctgcccgccttggcctcccaaagtgctgggattacaggtgtgag-caccacacccggccTATGCTTATTATTAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68681143 163 + 74645514 caccatgcccagctaatttcgtatttttagtgcagacagggtgtccccatgttggtcaggctggtctcgaa---------------ctcccaacctcaggtgatctgcccaccttggcctcccaaagtgctgggattacaggcgtgagccaccacacctggcctatgcttattattat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731693 163 - 75148670 caccatgcccagctaattttgtatttttagtgcagacagggtgtccccatgttggtcaggctggtcttgaa---------------ctcccaacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccacacccggccTATGCTTATTATTAT i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3704584 0 - 94967081 C e canFam3.chr9 57438804 13 - 61074082 I e rheMac3.chr16 74865596 881 + 80904711 M a score=8118.000000 s hg38.chr17_GL383566v1_alt 80615 5 + 90219 TATTA s panTro4.chr17 76270479 5 + 82630442 tatta i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67366651 5 + 73212453 tatta i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3704584 5 - 94967081 TATTA i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74675936 5 + 80997621 TACTA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68681306 5 + 74645514 tacta i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731856 5 - 75148670 TACTA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57438804 13 - 61074082 I e rheMac3.chr16 74865596 881 + 80904711 M a score=913813.000000 s hg38.chr17_GL383566v1_alt 80620 495 + 90219 TTTAATTTTTTAAGGAAAG---CAATCTAAACTGTACACTGT--ATCTTTTCTTTCTCTTTTGCTTTTT--------------------GTTGTCAGTTTTCTGTATTACTTATTGCCAAACAACATGAACAGGAAATTGAAAGGAAAA------------CTTCAACAATCATTGGCTGTAGCATTTCTTCTGTGTTCCATTCAGTGCTTGTCTCCTCAGGAACATGACATAGGGTTTGATTTAATTATG--AAAGG-------CGTATATTTTCAGAGTTTTATACTCCCCATAGAATGAA---TGTTGAATTCTGTTCTTTTCACTTGAAATTAGATCTCAGGCATGGATTTCATGATTATCACTATAATGGCTCTTCAGAGTGGACATTGCATCTTGTAGGGAACCACCCTCTCCCCAGCTGC----------------------TGGTGTGGACGCTCCTCCT-TGATGGTGTGGGTCTG-----GGCCCCTGAAGGGTGGTGTCCTGAGTAAAGA------TGTTAC-----AGTAGC----------CATGCTTATAGCTTTGGGCCTGGGGCTAGGTGGAGACTG s panTro4.chr17 76270484 499 + 82630442 tttaattttttaaGGAAAG---CAATCTAAACTGTACACTGT--ATCTTTTCTTTCTCTTTTGCTTTTT--------------------GTTGTCAGCTTTCTGTATTACTTATTGCCAAACAACATGAACAGGAAATTGAAAGGAAAA------------CTTCAACAATCATTGGCTGTAGCATTTCTTCCGTGTTCCATTCAGTGCTTGTCTCCTCAGGAACATGACATAGGGTTTGATT-AATTATG--AAAGG-------CGTATATTTTCAGAGTTTTATACTCCCCATAGAATGAA---TGTTGAATTCTGTTCTTTTCACTTGAAATTAGATCTCAGGCATGGATTTCATGATTATCACTATAATGGCTCTTCAGAGTGGACATTGCATCTTGTAGGGAACCACCCTCTCCCCAGCTGC----------------------TGGTGTGGACGCTCCTCCT-TGATGGTGTGGGTCTGAGTAAAGCCCCTGAAGGGTGGTGTCCTGAGTAAAGA------TGTTAC-----AGTAGC----------CATGCTTATAGCTTTGGGCCCGGGGCTAGGTGGAGACTG i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67366656 494 + 73212453 tttaattttttaaGGAAAG---CAATCTAAACTATACTCTGT--ATCTCTTCTTTCTCTTTTGCTTTTT--------------------GTTGTCAGTTTTCTGTATTACTTATTGCCAAATGATGTGAACAGGAAATTGAAAGGAAAA------------CTTCAAAAATCCTTGGCTGTAGCATTTCTTCTGTGTTCCATTCAGTGCTTGTCTCCACAGGAACATGACATAGGATTTGATTTAATTATG--AAAGG-------CGTATATTTTCAGAGTTTTATACTCCCTATAGAATGAA---TGTTGAATTCTGTTCTTTTCACTTGAAATTAGATCTCAGGCATGGATTTCATGATTATCACTATAACGGCTCTTCAGAGTGGACATTGCATCATGTAGGGAACCACCCTCTCCCCAACTGC----------------------TGGTGTGGATGCT-TTCCT-TGATGGTGTGGGTCTG-----GGCCCCTGAAGGGTGGTGTCCTGAGTAAAGA------TGTTAT-----AGTAGC----------CATGCTTATAGCTTTGGGCCCGGGGCTACATGGAGACTG i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3704589 495 - 94967081 TTTAATTTTTTAAGGAAAG---CAATCTAAACTATACGCTGT--ATCTCttctttctcttttgcttttt--------------------gttgtcagttttctGTGTTACTTATTGCCAAACAACGCGAACAAGAAATTGAAAGGAAAA------------CTTCAACAGTCATTGACTGTAGCATTTCTTTTGTGTTCCATTCAGTGCTTGTCTCCACAGGAACATGAGATAGGATTTGATTTAATTTTG--AAAGG-------TGTATATTTTCAGAGTTGCATACTCCCCATAGAATGAA---TGTTGAATTCTGTTCTTTTCACTTGAAATTAGATCTCAGGCATGGATTTCGTGATTATCACTATAATGGCTCTTCAGAGTGGACATTCCATCATGTAGGGAACCACCCTCTCCCCAACTGC----------------------TGGTGTGGACACTCCTTCT-TGATGGTGTGGGTCTG-----GGCCCCTGAAGGGTGGTGTCCTGAGTAAAGA------TGTTAC-----AGTAGC----------CATGCTTATAGCTTTGGGCCTGGGGCTAGGTGGAGACTG i nomLeu3.chr14 C 0 C 0 s macFas5.chr16 74675941 532 + 80997621 TTTAATTTTTTAAGGAAAG---CAATCTAAGCTATACGCTGT--ATCCCTTCTTTCTCTTTTGCTTTTT--------------------GTTGTCAGTTTTCTGTGTTACTTATTGCCAAACAACATGAACAGGAAATTGAAAGGAAAA------------CTTCAACAATCATTGACTGTAACATTTCTTTTGTGTTCCATTCAGTGCTTGTTTGCACAGGAACATGAGATAGGATTTGATTTAATTATGAAAAAGG-------CATATATTTTCAGAGTTGCATACTCCCCATAGAATGAATGTTGTTGAATTCTGTTCTTTTCACTCGAAATTAGATCTCAGGCATGGATTTCATGATTATCAGTATAATCGTTCTTCAGAGTGGACATTCCATCATGTAGGGGACCATCCTCTCCCCAGCTGCTGGTGTGGACGCTCCTCCTTGGTGGTGTGGACGCTCCTCCT-TGGTGGTGTGGGTCTG-----GGCCCTTGAAGGGTGATGTCCTGAGTAAAGA------TGTTAC-----AGTAGCCGTGCTTATACATGCTTATAGCTTTGGGCCCAGGGCTAGGTGGAGACTG i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68681311 503 + 74645514 tttaattttttaaggaaag---caATCTAAGCTATACGCTGt--atcccttctttctcttttgcttttt--------------------gttgtcaGTTTTCTGTATTACTTATTGCCAAACAACATGAACaggaaattgaaaggaaaa------------cttCAACAATCATTGACTGTAACATTTCTTTTGTGTTCCATTCAGTGCTTGTTTGCACAGGAACATGAGATAGGATTTGATTTAATTATG--AAAGG-------CATATATTTTCAGAGTTGCATACTCCCCATAGAATGAATGTTGTTGAATTCTGTTCTTTTCACTTGATATTAGATCTCAGGCATGGATTTCATGATTATCACTATAACGGTTCTTCAGAGTGGACATTCCATCATGTAGGGGACCATCCTCTCCCCAGCTGC----------------------TGGTGTGGACGCTCCTCCT-TGGTGGTGTGGGTCTG-----GGCCCTTGAAGGGTGGTGTCCTGAGTAAAGA------TGTTACTTATAAGTAGC----------CATACTTATAGCTTTGGGCCTAGGGCTAGGTGGAGACTG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30731861 517 - 75148670 TTTAATTTTTTAAGGAACG---CAATCTAAACTATACGCTGT--ATGCCttctttctcttttgcttttt--------------------gttgtcagttttctGTATTACT---------------TGAACAGGAAATTGAAAGGAAAA------------CTTCAACAATCATTGGCTGTAGCATTTCTTTTGTGTTCCATTCAGTGCTTGTTTGCACAGGAACATGAGATAGGGTTTGATTTAATTATGAAAAAGG-------CACATATTTTCAGAGCTGCGTACTCCCCATGGAATGAATGTTGTTGAATTCTGTTCTTTTCACTCAAAATTAGATCTCAGGCATGGATTTCATGATTATCACTATAATCGTTCTTCCGAGTGGACATTCCATCATGTAGGGGACCATCCTCTCCCCAGCTGCTGGTGTAGACGCTCCTCCTTGGTGGTGTGGACGCTCCTCCT-TGGTGGTGTGGGTCTG-----GGCCCTTGAAGGCTGATGTCCTGAGTAAAGA------TGTTAC-----AGTAGCCGTGCTTATACATGCTTATAGCTTTGGGCCCAGGGCTAGGTGGAGACTG i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57438817 516 - 61074082 TTTGTTTTCTTAAAGAAAAGCTTTTTCTAAAATACACACTGTGCATCTCGTCTTTCTCTTTGGTCTTCTTAAAATTTTTCCCCCTCTCGGTTGTTCACTTTGCTCATTACTCATCACCA----ACGAGAATAGGAAATTGAAAGAACAAATCGTCCCGTCCCGTCAGTCACCACTGCTTGTTGAGCCCCCTCCG---------------------CCACAGGCACAGGCGA-AGCGTTTGATTTGATTCTC--AAAGGTGTAAAACGTATTTTCCCAGATGTACGTGTTCCCTAGGGAAACCA----CTCTAATTCTGTCCTTTCCACCTGAGATGGGATCTCATGCATGGATTGCAGGATTCTGACT-TGATGGCTTCCCAGAGTGGACGTCCC-TGGTTTGCTGACCCCTCCTCTTGCTAGCCGC----------------------TGACCCTGCCCCTCCCCATGGGATGGTGGGGGCCCC-----GAGGCTCGAATCGAGGC-TTCTGTGCCAAGCCGACCTTGTCAC-----AGTAGC----------CGCGCTCCTAGCTGGGGGACACGGCCTGGTTGGATACTG i canFam3.chr9 I 13 C 0 e rheMac3.chr16 74865596 881 + 80904711 M a score=466470.000000 s hg38.chr17_GL383566v1_alt 81115 281 + 90219 GCTTCAACCCTAGAGCTTGCTGTCTTAAAATAAA-------ttctttttttttt-ttttttgagatggagtctcgctctgttgcccaggctggagtgcagtggcgcgatctccgctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcatcccgcatagctgggactacaggcacccgcccccacgcccggctaattttttgtatttttttagtagaggcggggtttcaccatgttagccaggatggtctcaatcttctgacctcgtgatccac s panTro4.chr17 76270983 282 + 82630442 GCTTCAACCCTAGAGCTTGCTGTCTTAAAATAAA------tttttttttttttt-ttttttgagatggagtctcgctctgttgcccaggctggagtgcagtggcgcgatctccactcactgcaagctccgcctcccgggttcacaccattctcctgactcagcatcccgcatagctgggactacaggcacccgcccccacgcccggctaattttttgtatttttttagtagaggcggggtttcaccatgttagccaggatggtctcaatcttctgacctcgtgatccgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67367150 287 + 73212453 GCTTCAACCCTAGAGCTTGCTGTCTTAAAATAAAttcttttttttttttttttt-ttttttgagatggagtcttgctctgtcgccca-gctggagtgcagtggcacgatctccactcactgcaagctccgcctcccgggttcacaccattttcctgcctcagcatccctcgtagctgggactacaggcacccgccaccatgcccggctaattttttgtatttttttagtagagacggggtttcaccgtgttagccaggatggtctcaatctactgaccttgtgatccac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3705084 283 - 94967081 GTTTCAACCCTAGAGCTTGCTGACTTAAAATAAA--ttcttttctttttttttt-ttttttgagatggagtctcactctgtcgcccaggctggagtgcagtggcgcgatctccgctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcccgcgtagctgggactacaggcgcccgccaccacgcccggctaattttttgtattttt---agagagacggggtttcaccatgttaaccaggatggtcttaatcttctgacctcgtgatctgc i nomLeu3.chr14 C 0 I 128 s macFas5.chr16 74676473 277 + 80997621 GCTTCAACTCTAGAGCTTGCTGTCTTAAA-----------ttattattattatt-ttttttgagacggagtctcgctgtgtcgcccaggctggagtgcagtggcgtgatctccactcactgcaagctctgcctcctgggtttacaccgttctcctgcctcagcctcccgcatagctggggctacaggtgcccgccaccacgccgggctaattttttgtatttttttagtagagatgggatttcaccgtgttagccaggatggtctcgatcttctgacctcgtgatctgc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68681814 282 + 74645514 GCTTCAACCCTAGAGCTTGCTgtcttaaattctt------ttcttttttttttt-ttttttgagatggagtctcgctgtgttgcccagggtggagtgcagtggcgcgatctccactcactgcaagctctgcctcctgggttcacaccattctcctgcctcagcctcccgtgtagctgggactacaggcgcccgccaccaagcccggctaattttttgtatttttttagtagagatgggatttcaccgtgttagccaggatagtcttgatcttctgacctcgtgatctgc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30732378 278 - 75148670 GCTTCAACTCTAGAGCTTGCTGTCTTAAA-----------ttattattattattattttttgagacggagtctcgctgtgtcgcccaggctggagtgcagtggtgcgatctccactcactgcaagctctgcctcccgggttcacaccgttctcctgcctcagcctcccgcgtagctgggactacaggcgcctgccaccatgcctggctaattttttgtattttttaagtagagacgggatatcaccatgttagccaggatggtctcgatcttctgacctcgtgatccgc i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M a score=33654.000000 s hg38.chr17_GL383566v1_alt 81396 27 + 90219 tcgcctcagcct-ccaaagtgctgggat s panTro4.chr17 76271265 28 + 82630442 tcgcctcagcctcccaaagtgctgggat i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67367437 28 + 73212453 ctgcctcggcctcccaaagtgctgagat i ponAbe2.chr17 C 0 I 1162 s macFas5.chr16 74676750 28 + 80997621 ccgccttggcctcccaaagtgctgggat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68682096 28 + 74645514 ccgccttggcctcccaaagtgctgggat i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30732656 28 - 75148670 ccgcctcggcctcccaaagtgctgggat i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M a score=142944.000000 s hg38.chr17_GL383566v1_alt 81423 177 + 90219 AAAATAAATTCTTAGggccgggagcggtggctcacacctgtaatcccagcactttgagaggccgaggcgggcagatcacaaggtcagaagatcgagaccatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggtgcagtggcgggcgcctgtagtcccagctactc s panTro4.chr17 76271293 177 + 82630442 AAAATAAATTCTTAGggccgggagcggtggctcacacctgtaatcccagcactttgagaggccgaggcgggcagatcacaaggtcagaagatcgagaccatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggtgcagtggcgggcgcctgtagtcccagctactc i panTro4.chr17 C 0 I 1150 s macFas5.chr16 74676778 165 + 80997621 AAAATAAATTCTTAGggccgggagcagtggctcccgcctgtaatcccagcactttgggaggctgaggcaggcggatcatgaggtcaggagattgagaccacggtgaaaccccgtctctactaaaaatacaaaaaattagctaggcttaat------------tagtcccagctacta i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68682124 177 + 74645514 aaaataaattcttagggccgggagcggtggctcacgcctgtaatcccggcactttgggaggctgaggcaggcagatcatgaggtcaggagactgagaccatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcgtggtggtgggcacctgtagtcccagctactc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30732684 177 - 75148670 AAAATAAAATCTTAGggcctggagcggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggatcatgaggtcaggagattgagaccatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcatggtggcgggcacctgtagtcccagttactc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I a score=50989.000000 s hg38.chr17_GL383566v1_alt 81600 121 + 90219 ----------gggaggctgaggcaggagaatggcatgaacccggaaggcggagcttgcagtgagccgagattgcgccagtgcactccagcctgggcgacagagtgagaccctgtctcataaataaataaat s macFas5.chr16 74676943 118 + 80997621 caggaggcaggagaggctgaggcaggagaatggcgtgaacctggaaggcggagctttcagtgagctgagattgcaccactgcactccagcctgggtgacagagcgagactccgtctca------------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68682301 108 + 74645514 ----------gggaggctgaggcaggagaaggacgtgaacctggaaggcagagcttgcagtgatctgagattgcgccactgcactccagcctgggtgacagagcgagactccatctct------------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30732861 108 - 75148670 ----------gggaggctgaggcaggagaatggcgtgaacctggaaggcagagctttcagtgagctgagattgcgccactgcactccagcctgggtgacagagcgagactccatctca------------- i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I e panTro4.chr17 76271470 1150 + 82630442 I a score=164722.000000 s hg38.chr17_GL383566v1_alt 81721 189 + 90219 aaataaataaataaataaatTCTTATACCCACTTGCAttatttattattattattattaaacagggtcttgctgtgttgcccaggttggagtgcagtggcgtgatcatgacctcccagtctcgacctcccagtttcaattggtcctcccttctcagcctcctgagtagctgggactacaggtgtgcgct s panTro4.chr17 76272620 189 + 82630442 aaataaataaataaataaatTCTTATACCCACTTGCAttatttattattattattattaaacagggtcttgctgtgttgcccaggttggagtgcagtggcatgatcatgacctcccagtctcgacctcccagtttcaattggtcctcccttctcagcctcccgagtagctgggactacaggtgtgcgct i panTro4.chr17 I 1150 C 0 s macFas5.chr16 74677061 185 + 80997621 ----aaataaataaaTACATTCTTATACCCACTTGCAttatttattattattattattaaacagggtcttgctgtgttgtccaggttggagtgcagtggcgtgatcatgacctcccagtctcgacctcccagtttcaattggtcctcccttctcagcccgccaagtagctgggactacaggtgtgcact i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68682409 185 + 74645514 ----aaataaataaatacattcttatACTCACTTGcattatctattattattattattaaacagggtcttgctgtgttgtccaggttggagtgcagtggcatgatcatgacctcccagtctcaacctcccagttTCAATTgttcctcccttctcagcctcccgtgtagctgggactacaggtgtgcact i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30732969 185 - 75148670 ----aaataaataaaTACATTCTTATACCCACTTGCAttatttagtattattattattaaacagggtcttgctgtgttgtccaggttggagtgcagtggcgtgatcatgacctcccagtctcgacctcccagtttcaattggtcctcccttctcagcctcccgagtagctgggactacaagtgtgcact i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I a score=1200.000000 s hg38.chr17_GL383566v1_alt 81910 2 + 90219 gc s panTro4.chr17 76272809 2 + 82630442 gc i panTro4.chr17 C 0 C 0 s macFas5.chr16 74677246 2 + 80997621 gc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68682594 2 + 74645514 gc i papAnu2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I e chlSab2.chr16 30733154 0 - 75148670 C a score=4530.000000 s hg38.chr17_GL383566v1_alt 81912 16 + 90219 atgcctggctaatttt s panTro4.chr17 76272811 16 + 82630442 atgcctggctaatttt i panTro4.chr17 C 0 C 0 s macFas5.chr16 74677248 16 + 80997621 atgcctggctaatttt i macFas5.chr16 C 0 I 639 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I e chlSab2.chr16 30733154 0 - 75148670 C e papAnu2.chr16 68682596 0 + 74645514 C a score=27104.000000 s hg38.chr17_GL383566v1_alt 81928 295 + 90219 ttttttttttttttttttgagacagagtcttactctgttgcccaggctggagtgccgtggtgcaatctcggctcactgcaacccccggctcctggattaaagcaattctcctgcctcagcctcctgaatagctgcgattacaggcatgtgccgccacacctggctaatttttgtatttttagtagggacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcgtgatccacctgccttggcctcccaaagtgctgggattacaggtgggagccaccgcgcctg s panTro4.chr17 76272827 290 + 82630442 ttttttttttttt-----gagacagagtcttactctgttgcccaggctggagtgccgtggtgcaatctcggctcactgcaacccccggctcctggattaaagcaattctcctgcctcagcctcctgaatagctgcgattacaggcatgtgccgccacacctggctaatttttgtatttttagtagggacggggtttcaccatgttggtcaggctggtctcaaactcctgacctcgtgatccacctgccttggcctcccaaagtgctgggattacaggtgggagccaccgcacctg i panTro4.chr17 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I e chlSab2.chr16 30733154 0 - 75148670 C e papAnu2.chr16 68682596 0 + 74645514 C e macFas5.chr16 74677264 639 + 80997621 I a score=600.000000 s hg38.chr17_GL383566v1_alt 82223 2 + 90219 gc s panTro4.chr17 76273117 2 + 82630442 gc i panTro4.chr17 C 0 C 0 s chlSab2.chr16 30733154 2 - 75148670 gc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I e papAnu2.chr16 68682596 0 + 74645514 C e macFas5.chr16 74677264 639 + 80997621 I a score=18146.000000 s hg38.chr17_GL383566v1_alt 82225 38 + 90219 atgcctggctaatttttaaaaaatttttgtagcagccg s panTro4.chr17 76273119 38 + 82630442 atgcctggctaattttaaaaaaatttttgtagcagccg i panTro4.chr17 C 0 C 0 s papAnu2.chr16 68682596 38 + 74645514 atgcctgcctaattttgaaaaaatttttgtagtggcca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30733156 38 - 75148670 atgcctgcctaattttgaaaaaatttttgtagtggcca i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e ponAbe2.chr17 67367465 1162 + 73212453 I e macFas5.chr16 74677264 639 + 80997621 I a score=152090.000000 s hg38.chr17_GL383566v1_alt 82263 178 + 90219 ggcgcggtggctcatgcctgtaatcctagcactttgggaggccaag---------------gaggtcgggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaactacaaaattagctgggcatggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaattgc s panTro4.chr17 76273157 178 + 82630442 ggtgcggtggctcatgcctgtaatcctagcactttgggaggccaag---------------gaggtcgggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaactacaaaattagctgggcatggtggcacatgcctgtaatcccagctactcaggaggctgaggcaggagaattgc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67368627 178 + 73212453 ggcgcggtggctcatgcctgtaatcctaacactttgggaggctaag---------------gaggtcgggagttcaagaccagcctgaccaacatggagaagccctgtctctactaaaactacaaaattagccgggcgtggtggcacatgcctgtaatcccagctactcaggaggctgaagcaggagaattgc i ponAbe2.chr17 I 1162 C 0 s papAnu2.chr16 68682634 193 + 74645514 ggcgtagtggctcatgcctataatcctagcactttgggaggctgaggcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacacggagaaaccctgtctctactaaaactacaaaataagccaggcgtggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaagagaatcac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30733194 193 - 75148670 ggcgcagtggttcatgcctgtaatcctagcagtttgggaggctgaggcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacacggagaagccctgtctctactaaaactacaaaattagccaggcgtggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaagagaatcgc i chlSab2.chr16 C 0 C 0 e nomLeu3.chr14 3705367 128 - 94967081 I e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e macFas5.chr16 74677264 639 + 80997621 I a score=106654.000000 s hg38.chr17_GL383566v1_alt 82441 96 + 90219 ttgaatctaggaggcgggggttgcagtgagctgagatcgtgccacggcactccagcctgggcaaagagagtgaaactccgtctcaaaaaa---tttttg s panTro4.chr17 76273335 96 + 82630442 ttgaatctaggaggcgggggttgcagtgagctgagatcgtgccacggcactccagcctgggcaacgagagtgaaactccgtctcaaaaaa---tttttg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67368805 95 + 73212453 ttgaatctaggaggtgggggttgcagtgagctgagattgtgccattgtactccagcctgggcaacgagagtgaaactctgtctc-aaaaa---tttttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3705495 99 - 94967081 ttcaatctaggaggcgggggttgcagtgagccgagatcatgccactgtactccagcctgcgcaacgagagtgaaactccgtctcaaaaaaaaTTTTttt i nomLeu3.chr14 I 128 C 0 s papAnu2.chr16 68682827 96 + 74645514 tcgaaccggggaggcggaggttgcggtgagccgagatggtgccattgtacgccagcctgggcaacaagagtgaaactccatctcaaaaaa---tttttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30733387 96 - 75148670 ttgaactggggaggcggaggttgcggtgagccgagatggtgccattgtactctagcctgggcaatgagagtgaaactccatctcaaaaaa---attttt i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57439333 0 - 61074082 C e rheMac3.chr16 74865596 881 + 80904711 M e macFas5.chr16 74677264 639 + 80997621 I a score=317402.000000 s hg38.chr17_GL383566v1_alt 82537 173 + 90219 tttttgtttttgtagcgacagggtcttgttttgttgttgcctaggctggtactgaatttccagcctcaagcgatcctcctgcctcagcctcccaaagcgctgggagtacaggcgtgagtcactgtgcctggccTCCACTTGCTTTGGCTGCCTTTCTCTGTCTTAGGTAACCA s panTro4.chr17 76273431 173 + 82630442 tttttgtttttgtagcgacagggtcttgttttgttgttgcctaggctggtactgaatttccagcctcaagcgatcctcctgcctcagcctcccaaagcgctgggagtacaggcgtgagtcactgtgcctggccTCCACTTGCTTTGGCTGCCTTTCTCTGTCTTAGGTAACCA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67368900 173 + 73212453 tttttgtttttgaagcgacagggtcttgctttgttgttgcctaggctggtactgaatttccagcctcaagcaatcctcctgcctcagcctcccaaagcgctgggagtacaggcgtgagtcactgtgcctggccTCCACTTGCTTTGGCTACCTTTCTTTGTCTTAGGTAACCA i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3705594 172 - 94967081 tttttttttttgtagctacagggtcttgttttgttgttgcctaggctggtactgaatttccagcc-caagcgatcctcctgcctcagcctcccaaagcgctgggagtgtaggtgtgggtcactgtgcctggccTCCACTTGCTTTGGCTGCCTTTCTCTGTCTTAGGTAACCA i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74866498 173 + 80904711 tttttttttttgtagtgactgagtcttgctttgttgttgcctaggctggtactgaatttccagcctcaagcgatcctcctgcctcagcctcccaaagctctgggagtacaggcatgagtcactgtgcctggccTCCACTTGCTTTGGCTACCTTTCTCTGTCTTAGGTAACCA i rheMac3.chr16 M 881 C 0 s papAnu2.chr16 68682923 173 + 74645514 tgtttgtgtttgtagtgatagggtcttgctttgttgttgcctaggctggtactGAATTtccagcctcaagcgatcctcctgcctcagcctcccaaagcgctgggagtacaagcatgagtcactgtgcctggcctccacttGCTTTGGCTACCTTTCTCTGTCTTAGGTAACCA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30733483 170 - 75148670 ---ttttttttgtagtgactgggtcttgctttgttgttgcctaggctggtactgaatttccagcctcaagcgatcctcctgcctcagcctcccaaagctctgggagtacaggcatgagtcactgtgcctggccTCCACTTGCTTTGGCTACCTTTCTCTGTCTTAGGTAACCA i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57439333 0 - 61074082 C e macFas5.chr16 74677264 639 + 80997621 I a score=513194.000000 s hg38.chr17_GL383566v1_alt 82710 266 + 90219 TACATTTCTCCAGGTAA-----TTAAGAAAAGATTGCGCATGATGAGTCC-CTTTTCTGGTATTTCTGGGATTGCCCCCAAAACCAGACAAGTGTTCTTACCTTGACATTTTATTAAGA-CTTTAATGAACAG--AATGCCGTTTGCCCTCAGTCTGCTGGTCCCCCTGCGAAGGCCCAGGGCTTCCTTGTTTGAAAAGTCATCCCCTTGT-----CGAGGT------------------CTTTGA--------TTCCTTTTCACCAC------------GGCAGTCATGCCGAGGG-----------------------TCCACAGAGCCACCCC-TTCCC s panTro4.chr17 76273604 266 + 82630442 TACATTTCTCCAGGTAA-----TTAAGAAAAGATTGCGCATGATGAGTCC-CTTTTATGGTATTTCTGGGATTGCCCCCAAAACCAGACAAGTGTTCTTACCTTGACATTTTATTAAGA-CTTTAATGAACAG--AATGCCGTTTGCCCTCAGTCTGCTGGTGCCCCTGCGAAGGCCCAGGGCTTCCTTGTTTGAAAAGTCATCCCCTTGT-----CGAGGT------------------CTTTGA--------TTCCTTTTCACCAC------------GGCAGTCATGCCGAGGG-----------------------TCCACAGAGCCACCCC-TTCCC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67369073 269 + 73212453 TACATTTCTCCAGGTAA-----TTAAGAAAAGATTGCGCATGAAGAGTCC-CTTTTCTGGTATTTCTGGGATTGCCCCCAAAACCAGACAAGTGTTCCTACCTCAACATTTTACTAAGA-GTTTAATGAACAG--AATGCCGTTTGCCCTCAGTCTGCTGGTCCACCTGCGAAGGCCCAGGGCTTCTTTGTTTGAAAAGTCATCCCCTTGT-----TGAGGT------------------CTTTGA--------TTCCTTTTCACCACT-----------GGCAGTCATGCCGGGGGC----------------------TCCACAGGGCCACCCCTTTTCC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3705766 269 - 94967081 TACATTTCTCCAGGTAA-----TTAAGAAAAGATTGCACATGATGAGTCC-CTTTTCTGGTATTTCTGGGATTGCCCACAAAACCAGACAAGTGTTCTTACCTTGACATTTTACTAAGA-GTTTAATGAACAG--AATGCCGTTTGCCCTCAGTCTGCTGGTCCCCCTGTGAAGGCCCAGGGCTTCCTTGTTTGAAAAGTCGTCCCCTTGT-----TGAGAT------------------CTTTGA--------TTCCTTTTCACCACT-----------GGCAGTCATGCCCGGGGC----------------------TCCACAGGGCCACCCCTTTTCC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74866671 268 + 80904711 TACATTTCTCCAGGTAA-----TTAAGAAAAGATTGCGCATGATGAGTCC-CTTTTCTGGTATTTCTGGGATTGCCCCCAAAACCAGACAAGTGTTCTTACCTCGACATTTTCTTAAGA-GTTGAATGAACGG--AATGCCATTTGCCCTCAGTCTGCTGGTGCCCCTGAGAAGGCCCAGTGCTTCCTTGTTTGAAAAGTCATCCCCTTGT-----TGAGGT------------------CTTTGA--------TTCCTTTTCACCACT-----------GGCGGTCATGCCGGGGGC----------------------TCCACAGAGCCACCCC-TTCCC i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 68683096 268 + 74645514 TACATTTCTCCAGGTAA-----TTAAGAAAAGATTGCGCATGATGAGTCC-CTTTTCTGGTATTTCTGGGATTGCCCCCAAAACCGGACAAGTGTTCTTACCTCGACATTTTATTAAGG-GTTTAATGAACGG--AATGCCACTTGCCCTCAGTCTGCTGGTGCCCCTGAGAAGGCCCAGTGCTTCCTTGTTTGAAAAGTCATCCCCTTGT-----TGAGGT------------------CTTTGA--------TTCCTTTTCACCACT-----------GGCAGTCATGCCGGGGGC----------------------TCCACAgagccacccc-ttccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30733653 268 - 75148670 CACATTTCTCCAGGTAA-----TTAAGAAAAGATTGCGCATGATGGGTCC-CTTTTCTGGTATTTCTGGGAATCCCCCCAAAACCAGACAAGTGTTCTTACCTCGACATTTTGTTAAGA-GTTTAATGAACAG--AATGCCATTTGCCCTCAGTCTGTTGGTGCCCCTGAGAAGGCCCAGTGCTTCCTTGTTTGAAAAGTCATCCCCTTGT-----TGAGGT------------------CTTTGA--------TTCCTTTTCACCACT-----------GGCAGTCATGCTGGGGGC----------------------TCCACAGAGCCACCCC-TTCCC i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57439333 331 - 61074082 AACCTTTCTCCAGGTAATTAGCTTAATAAAACATTGTGCACGATGACTCCTTTTTTCCATCATTCCTGGGATTGCATCCAAAACCAGACAAGTGTTCTGACTGCAGCGTTTTGTAAGGAGGCTCGATGAACAGCAAATGCCGTTCGC------TCTGCTTATCAACCC----ACGTCGAGGATTGACTTGTCTAGAAGGTCagccccaggcccccgtgagatggcatttggaagccgggcctttgggaggcaatttcccttgagacagtcttgagggtgcggccctcatggtggggttggtgtccctataagaggaggagactgcagtgctccccc-tacct i canFam3.chr9 C 0 I 126 e macFas5.chr16 74677264 639 + 80997621 I a score=749218.000000 s hg38.chr17_GL383566v1_alt 82976 400 + 90219 CATCTCTTCCTCGGCCCCT----CAAGACGCATCTGTACCCCCGGAGATGTCTCTTTGTTTTCTTG------------------GGCCAC----------------CTCTCCTGGCCGTCACTCACCCTGCTGACTCATTACTTGTGCAACAGTTTCTTCTGGAACCCTCAGGCTCCTGCCACCTACCCTCTGCAGTCCCCGTTTTGTTCCTCTTGCCTCAGTCTTCCTCCCCATCACCCCTCTACCTGTTGGTCTCCATCTCTGTCTATGGCACATCCCTGTGTTATACTCTGATGGCTGGATAAAGGTTGAGTGAAACGCATCTACCCCTTTGGTGAC-TGG-GGTGCCCATTAATCAGAAGGGATCCAAGGCTGGCGTAGCCTTTTCCCGCATCCTGGGG-TATCGTCCTGTGGCTCTTCCTTGTTGGAGTCTGCAGt s panTro4.chr17 76273870 400 + 82630442 CATCTCTTCCTCGGCCCCT----CAAGATGCATCTGTACCCCCGGAGATGTCTCTTTGTTTTCTTG------------------GGCCAC----------------CTCTCCTGGCCGTCACTCACCCTGCTGGCTCATTACTTGTGCAGCAGTTTCTTCTGGAACCCTCAGGCTCCTGCCACCTACCCTCTGCAGTCCCCGTTTTGTTCCTCTTGCCTCAGTCTTCCTCCCCATCACCCCTCTACCTGTTGGTCTCCATCTCTCTCTATGGCACATCCCTGTGTTATACTCTGATGGCTGGATAAAGGTTGAGTGAAACGCATCTACCCCTTTGGTGAC-TGG-GGTGCCCATTAATCAGAAGGGATCCAAGGCTGGCATAGCCTTTTCCCGCATCCTGGGG-TATCGTCCTGTGGCTCTTCCTTGTTGGAGTCTGCAGt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67369342 399 + 73212453 CTTCTCTTCCTCGGGCCCT----CAAGACGCATCTGTACCCCCGGAAATGTCTCTTTGTTTTCTTG------------------GGCCAC----------------CTCTCCTGGCCGTCACTCACCCTGCTGGCTCGTTACTTGTGCAGCAGTTTCTTCTGGAACCCTCAGGCTCCTGCCACCTACCCTCTGCAATCCCCGTTTTGTTCCTCTTGCCTCAGTCTTCCTCCCCATCACCCCTCTACCTGTTGTTCCCCATCTCTGTCTATGGCACATCCCTGTGTTATACACTGATGGCTGGATAAAGATTGAGTGAAACGCGTCTA-CCCTTTGGTGAC-TGG-GGTGCCCATTAATCAGAAGGGATCCAAGGCTGGCATAGCCTTTTCCCGCATCCTGGGG-TATCGTCCTGTGGCTCTTCCTTGTTGGACTCTGCAGt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3706035 383 - 94967081 GTTCCCTTCCTCGGCCCCT----CAAGACGCATCTGTACCCCCAGAGATGTCTCTTTGTTTTCTTG------------------GGCCAC----------------CTCTCCTGGCCGTCACTCACCCTGCTGGCTCGTTACTTGTGCAGCAGTTTCTTCTGGAA--------------CCACCTACCCGCTGCAGTCCCCGTTTTGTTCCTCTTGCCTCAGTCTTCCTCCCCATCACCTCTCTACCTGTTGGTCCCCATCTCTCTCTGTGGCACATCCGTGTGTTATACTCTGATGGCTGGATAAAAGTTGAGTGAAACGCATCTA-CCCTTTGGTGACGTGGTGGTGCCCATTAATCAGAAGGGATCCAAGGCTGGCATGGC---TTTCTGCATCCTGGGG-TATCGTCCTGTGGCTCTTCC-TGTTGGAGTCTGCAGt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74866939 396 + 80904711 CATCTCTTCCTTGGCCCCT----CAGGATGCATCTGTACCCCCGGAGATG----TCTGTTTTCTTG------------------GGCCAC----------------CTCTCCTGGCTGTCACTCACCCTGCTGGCTCGTTACTTGTGCAGCAGTTTCTTCTGGAACCCTCAGCCTCCTGCCATCTACCCTCTGCAGTCCCCGTTTTGTTCCTCTTGCCTCGGTCTTCCTCCCCATCATCCCTCTACCTATTGGTCCCCATCTCTCTCTATGGCACATCCCTGTGTTATACTCTGATGGCTGGATAAAGGTCGAGTGAAATGCATCTATCCCTTTGGTGAC-TGG-GGTACCCATTAAGCAGAAGGGATCCAAGGCTGGCATAACCTTTTCCCACATCCTGGGG-TATTGTCCTGTGGCTCTTCCTTGTTGGCGTCTGCAGT i rheMac3.chr16 C 0 I 700 s papAnu2.chr16 68683364 398 + 74645514 catctctTCCTCGGCCCCT----CAAGATGCATCTGTGCCCCCGGAGATG--TCTCTGTTTTCTTG------------------GGCCAC----------------CTCTCCTGGCTGTCACTCACCCTGCTGGCTCGTTACTTGTGCAGCAGTTTCTTCTGGAACCCTCAGGCTCCTGCCACCTACGCTCTGCAGTCCCCGTTTTGTTCCTCTTGCCTCGGTCGTCCTCCCCATCATCCCTCTACCTATTGGTCCCCATCTCTCTCTATGGCACATCCCTGTGTTATACTCCGATGGCTGGATAAAGGTCGAGTGAAATGCATCTATCCCTTTGGTGAC-TGG-GGTACCCATTAAACAGAAGGGATCCAAGGCTGGCATAACCTTTTCCCGCATCCTGGGG-TATTGTCCTGTGGCTCTTCCTTGTTGGCGTCtgcagt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30733921 398 - 75148670 CATCTCTTCCTCGGCCCCT----CAAGATGCATCTGTACCCCTGGAGATG--TCTCTGTTTTCTTG------------------GGCCAC----------------CTCTCCTGGCTGTCACTCACCCTGCTGGCTCGTTACTTGTGCAGCAGTTTCTTCTGGAACCCTCAGGCTCCTGCCACCTACCCTCTGCAGTCCCCGTTTTGTTCCTCTTGCCTTGGTCTTCCTCCCAGTCACCCCTCTACCTATTGGTCCCCATCTCTCTCTATGGCACATCCCTGTGTTATACTCAGATGGCTGGATAAAGGTCGAGTGAAATGCATCTATCCCTTTGGTGAC-TGG-GGTACCCATTAAGTAGAAGGGATCCAAGGCTGGCATAGCCTTTTCCCGCATCCTGGGG-TATTGTCCTGTGGCTATTCCTTGTTGGCGTCTGCAGt i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57439790 431 - 61074082 CTTCCCTTCTTTGGCCCCTATGGATGGATGCACGTGTACCCTAGGAGGTGTCCTTTGGCTTCTTTGAACCAGCCTAAATGCCCTGGCCACCCCCGGTGACCGATCGCTCTCCTGGCGACCATTCCTTATGCTGCCTCGTTACCTGTGCAGCGACTTCTACTGGA--CGCCGGGCCCCACAGGCCAGTCGACAGCGCTGCCTGCACAG--CCGCCTGCCT-AGCCAGGCTTCCCAAGGCCCTTGCACCCCT--GACCTCACCTTTGTCTGGGGCGTGCCCTCCTGTCATGCTCTCCCCAGCATCCCAAGCTCGAGCGAAGCACGTCTACCTCTTTGGTGAC-TCG-GGGGGATAGTAA-CAGTGGGACCCCAAGAAGACCGATGCACCTTCCCGTAATCTGGGGACGCCTTCCTACAGCTCTTTTTGGCCGCAGTCAGCAGT i canFam3.chr9 I 126 C 0 e macFas5.chr16 74677264 639 + 80997621 I a score=-1288.000000 s hg38.chr17_GL383566v1_alt 83376 16 + 90219 -ttt--tt------gtttttttttt s panTro4.chr17 76274270 16 + 82630442 -ttt--tt------gtttttttttt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67369741 18 + 73212453 -ttttatt------gtttttatttt i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3706418 18 - 94967081 -ttttatt------gtttttatttt i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868035 19 + 80904711 ------tttttgtattttttttttt i rheMac3.chr16 I 700 C 0 s papAnu2.chr16 68683762 11 + 74645514 --------------ttttattgttt i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734319 11 - 75148670 --------------ttttattgttt i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57440221 16 - 61074082 TTCTGATG------GTTTTCCT--- i canFam3.chr9 C 0 I 4 e macFas5.chr16 74677264 639 + 80997621 I a score=155000.000000 s hg38.chr17_GL383566v1_alt 83392 98 + 90219 tttaaattttttgagatg--gagtctcgctctgtcgcccaggctggagtgcagtggtgagatcccagctcactgcaacctccgcctcccgggttcaacca s panTro4.chr17 76274286 96 + 82630442 tt--aattttttgagttg--gagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcccagctcactgcaacctccgcctcccgggttcaacca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67369759 95 + 73212453 tt---attttttgagatg--gagtttcgctgtgtcgcccaggctggagtgcagtggtgcgatcctggctcactgcaacctccgcctcccgggttcaacca i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3706436 95 - 94967081 tt---attttttgagatg--gagtcttgctctgttgcccaggctggagtgcagtggtacgatcctggctcactgcaacctccgcctcccgggttcaacca i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868054 95 + 80904711 tt---tttttttgagacg--gagtctcgctctgtcgcccgggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgcc i rheMac3.chr16 C 0 C 0 s papAnu2.chr16 68683773 95 + 74645514 tt---attttttgagatg--gagtctcgctctatcgcccaggctggagtgcagtggtgcgatcctggctcgctgcaacctccatctcccaggttaaacca i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734330 97 - 75148670 tt---attttttgagatggagagtctcgctctatcgcccaggctggagtgcagtggtgcgatcctggctcgctgcgacctccacctcccgggttcaacca i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57440237 4 - 61074082 I e macFas5.chr16 74677264 639 + 80997621 I a score=518323.000000 s hg38.chr17_GL383566v1_alt 83490 280 + 90219 attctcctgcttcagcctcccaagtagctgggactacaggcgcccgccaccatgcctggccaa-ttttggtatttttagtagagac-ggggtttccctacattggccgggctggtctcgaactcttgacctcaggtgataggctcgcgtcggcctcccaaagtgctgagattacgggcatgagccaccaggcccggccGTTGAGATTACCTTCATAAGCCACCAGGCCTGGCTGTAGTTGGCAGTTTTTGACCACTGGTCTCGCTCCACGTGATCTGTG----ATC s panTro4.chr17 76274382 281 + 82630442 attctcctgcttcagcctcccaagtagctgggactacaggcgcccgccactacgcctggccaa-ttttggtatttttagtagagacgggggtttccctacattggccgggctggtctcgaactcttgacctcaggtgataggcttgcgtcggcctcccaaagtgctgagattacgggcatgagccaccaggcccggccGTTGAGATTACCTTCATAAGCCACCAGGCCTGGCTGTAGTTGGCAGTTTTTGACCACTGGTCTCGCTCCACGTGATCTGTG----ATC i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67369854 284 + 73212453 attctcctgcttcagcctcccgagtagctgggactacaggcgcccaccaccacgcccggccaa-tttttgtatttttagtagagac-ggggtttccctatgttagctgggctggtctcaaactcttgacctcaggtgataggcttgcgtcggcctcccaaagtgctgagattacagccatgagccaccaggcccggccGTTGAGATTACTGGCATAAGCCACCAGGCCCAGCCGTAGTTGGCAGTTTTTGACCACTAGTCTCTCTCCACGTGATCGGTGATCTATC i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3706531 245 - 94967081 attctcctgcttcagcctcccgagtagctgggactacaggcgcccgccaccatgcccggccaa-tttttgtaattttagtagagac-ggggtttccctatgttggccgggctggtctcgaactcttgacctcaggtgataggctcgcgtcggcctcccaaagtgctgagattactggcatgagccaccaggcccggcc-----------------------------------GTAGTTGGCAGTTTTTGACCACTGGTCTCTCGCCACGTGATCTGTG----ATC i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868149 246 + 80904711 attctcccgcctcagcctcccaagtagctgagactacaggcgcccgccaccacgcccggctagttttttgtatttttagtagagac-ggggtttccctatgttggccaggctggcctccaactcttggcctccggtgataggttcgcgttggcctcccgaagtgctgagattaatggcatgagccaccaggcccggcc-----------------------------------ATGGTCGGCAGTTTTTGACCACTGGTCGTTCTCCGTGTGATCAGTG----ATC i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74677903 234 + 80997621 atccacccgcctcggcctcccaaagtgctgggattacaggcttgagccacaa------------tttttgtatttttagtagagac-ggagtttccctatgttggccaggctggcctccaactcttggcctcaggtgataggttcgcgtcggcctcccgaagtgctgagattaagggcatgagccaccaggcccggcc-----------------------------------ATGGTCGGCAGTTTTTGACCACTGGTCGTTCTCCGTGTGATCAGTG----ATC i macFas5.chr16 I 639 C 0 s papAnu2.chr16 68683868 242 + 74645514 ---attctgcttcagcctcccgagtagctgggactacaggcgcatgccaccacgcccggccaa-tttttgtatttttaatagagac-ggggtttccctatgttggccaggctggcctccaactcttggcctcaggtgatagGTTCGcgtcggcctcccgaagtgctgagattaagggcatgagccaccaggcccggcc-----------------------------------atgGTCGGCAGTTTTTGACCACTGGTCGTTCTCCGTGTGATCAGTG----ATC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734427 242 - 75148670 ---attctacttcagcctcccgagtagctgggactacaggcgcatgccaccacacccagccaa-tttttgtatttttagtagagac-ggggtttccctatgttgaccaggctggcctccaactcgtggcctcaggtgataggttcgcgtcggcctcctgaagtgctgagattaagggcatgagccaccaggcctggcc-----------------------------------ATAGTCGGCAGTTTTTGACCACTGGTCGTTCTCCGTGTGATCTGTG----ATC i chlSab2.chr16 C 0 C 0 e canFam3.chr9 57440237 4 - 61074082 I a score=134659.000000 s hg38.chr17_GL383566v1_alt 83770 50 + 90219 TTCCCCTTGGCCCCCTGGCCCTGCCCTGTTCATCTGCTCACCTTTCTCAT s panTro4.chr17 76274663 50 + 82630442 TTCCCCTTGGCCCCCTGGCCCTGCCCTGTTCCTCTGCTCACCTTTCTCAT i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67370138 50 + 73212453 TTCACCTTGGCACCCTGGCCCTGCCCTGTTCATCTGCTCACGCTTCTCAT i ponAbe2.chr17 C 0 I 529 s nomLeu3.chr14 3706776 50 - 94967081 TTCCCCTTGGCCTCCTGGCCCTGCCCTGTTCATCTGCTCACCTTTCTCAT i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868395 50 + 80904711 TTCCTCTTGGCCCACTGACCCTGCCCTGTTCATCTGCTCACCTTTCTCAT i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74678137 50 + 80997621 TTCCTCTTGGCCCACTGACCCTGCCCTGTTCATCTGCTCACCTTTCTCAT i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68684110 50 + 74645514 TTCCTCTTGGCCCACTGACCCTGCCCTGTTCATCTACTCACCATTCTCAT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734669 50 - 75148670 TTTCTCTTGGCCCACTGACCCTGCCCTGTTCATCTGCTCACCTTTCTCAT i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57440241 48 - 61074082 TTCCCCTAGGGTCCCTGGGCC--CTTTGTTCATCTGCTCATCTTTCTTAC i canFam3.chr9 I 4 C 0 a score=121027.000000 s hg38.chr17_GL383566v1_alt 83820 66 + 90219 GCATGCGGTTTGTTCATAGGGTATGTAATGGGGTCTAACCAGGAAATGGAAACCGCTTGAGCattt---- s panTro4.chr17 76274713 62 + 82630442 GCATGCGGTTTGTTCATAGGGTATGTAATGGGGTCTAACCAGGAAATGGAAACCGCTTGAGC-------- i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3706826 62 - 94967081 GCATACGATTTGTTCATGGGGTATGTAATGGGGTCTAACCAGGAAATGGAAACCGCTTGAGC-------- i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868445 62 + 80904711 GCATACTGTTTGTTCGTGGGGGATGTAATGGGGTCTAACCAGGAAATGGAAACCACTTGAGT-------- i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74678187 62 + 80997621 GCATACTGTTTGTTCGTGGGGGATGTAATGGGGTCTAACCAGGAAATGGAAACCACTTGAGT-------- i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68684160 62 + 74645514 GCATACTGTTTGTTCGTGGGGGATGTAATGGGGTCTAACCAGGAAATGGAAACCACTTgagt-------- i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734719 62 - 75148670 GCATACTGTTTGTTCGTGGGGGATGTAATGGGGTCTAACCAGGAAATGGAAACCACTTGAGT-------- i chlSab2.chr16 C 0 C 0 s canFam3.chr9 57440289 66 - 61074082 GGGTACAGTTTGTTCATGGCTTGTATTTGGGTgtctgaccaggacacagaaatcactcgagg----actt i canFam3.chr9 C 0 N 0 e ponAbe2.chr17 67370188 529 + 73212453 I a score=37384.000000 s hg38.chr17_GL383566v1_alt 83886 41 + 90219 atttatttatttatttatttatttattt----atttatttTTCCC s panTro4.chr17 76274775 33 + 82630442 --------atttatttatttatttattt----atttatttTTCCC i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3706888 21 - 94967081 --------------------Atttattt----atttatttttctc i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868507 37 + 80904711 --------ATTAATTAATTAAtttatttattcatttatttttccc i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74678249 33 + 80997621 --------ATTAATTAATTAAtttattt----atttatttttccc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68684222 41 + 74645514 ----attaattaattaattaatttatttatttatttatttttccc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734781 33 - 75148670 --------attaattaattaattaattt----atttatttttccc i chlSab2.chr16 C 0 C 0 e ponAbe2.chr17 67370188 529 + 73212453 I a score=315450.000000 s hg38.chr17_GL383566v1_alt 83927 177 + 90219 Aagacaaggtctcactc----tgtcacgcaagctgaagtgcagtggtgtgatcacagctcatggcagccttgaactcctgagctcaagcgatcctcccttctcagcctcccaagtagctcggactataggtgcacactata-tgcctg----------------------------cctaa----------ttttttcttttatttttgtagagacaggg s panTro4.chr17 76274808 177 + 82630442 Aagacaaggtctcactc----tgtcacgcaagctgaagtgcagtggtgtgatcacggctcacggcagccttgaactcctgagctcaagtgatcctcccttctcagcctcccaagtagctcggagtataggtgcacactcta-tgcctg----------------------------cctaa----------ttttttcttttatttttgtagagacaggg i panTro4.chr17 C 0 C 0 s nomLeu3.chr14 3706909 174 - 94967081 aagacaaggtctcactc----tgtcacgcaagctgaagtgcagtgatgtgatcacggctcactgcagccttgaacaactgagctcaagcgatcctcccttctcagcctcccaagtagctcggactataggtgcacactgta-tgcctg----------------------------ccta-------------tttttttttatttttgtagagacaggg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868544 177 + 80904711 aagacaaagtcttactc----tgtcacccaagctgaaatgcggtggtgtgatcacggctcactgcagccttgaactcctgggctcaagcaatcctcccttctgagcctcccaaggggcttggactataggtgcacacgata-tgcaat----------------------------cctaa----------ttttttttttattttttgtagagacaggg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74678282 176 + 80997621 aagacaaagtcttactc----tgtcgcccaagctgaaatgcggtggtgtgatcacggctcactgcagccttgaactcctgggctcaagcaatcctcccttctgagcctcccaaggggcttggactataggtgcacacgata-tgccgg----------------------------cctaa-----------tttttttttattttttgtagagacaggg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68684263 176 + 74645514 aagacaaagtcttactc----tgtcgcccaagctgaagtgcggtggcgtgatcacggctcactgcagccttgaactcctgggctcaagcaatcctcccttctgagcctcccaagtggctcggactataggtgcacacgata-tgccgg----------------------------cctaa-----------tttttttttattttttgtagagacaggg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734814 176 - 75148670 aagacaaggtcttactc----tgtcgcccaagctgaagtgcagtggtgtgatcacggctcactgcagccttgaactcctgggctcaagcgatcctcccttctgagcctcccaagtggctcggactataggtgcacatgata-tgccgg----------------------------cctaa-----------tttttttttattttttgtagagacaggg i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114240105 186 - 158406734 aagacagggtctcacttactacgttgcccaggctg-------gttgtgt------------------------actcctgggctcatgtgatcctcctgcctgggcctactaaagtgctggggttacaggtgggagccacagtgcctggtcCACTTGAGCATTTAGAACAGAAGGACCTAAAGGCACAGAAttttttttttctttttt---gagacggag i calJac3.chr6 N 0 C 0 e ponAbe2.chr17 67370188 529 + 73212453 I a score=63917.000000 s hg38.chr17_GL383566v1_alt 84104 23 + 90219 -tcttgctttgtt-gcccagg--ctgg s panTro4.chr17 76274985 23 + 82630442 -tcttgctttgtt-gcccagg--ctgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67370717 26 + 73212453 -tcttgctttgttggcccagggcctgg i ponAbe2.chr17 I 529 C 0 s nomLeu3.chr14 3707083 23 - 94967081 -tcttgctttgtc-gcccagg--ctgg i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868721 23 + 80904711 -tcttgctttgtt-gcccagg--ctgg i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74678458 23 + 80997621 -tcttgctttgtt-gcccagg--ctgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68684439 23 + 74645514 -tcttgctttgtt-gcccagg--ctgg i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30734990 23 - 75148670 -tcttgttttgtt-gcccagg--ctgg i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114240291 24 - 158406734 ttctgctcttgtt-acccagg--ctgg i calJac3.chr6 C 0 I 11 a score=33939.000000 s hg38.chr17_GL383566v1_alt 84127 20 + 90219 tcc-tgaactcccaacctc-aa s panTro4.chr17 76275008 20 + 82630442 tcc-tgaactcccaacctc-aa i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67370743 22 + 73212453 tccttgaactcccaacctcaaa i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3707106 20 - 94967081 tcc-tgaactcccaacctc-aa i nomLeu3.chr14 C 0 C 0 s rheMac3.chr16 74868744 20 + 80904711 tct-tacattcctgggttt-at i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74678481 20 + 80997621 tcc-cgaactcccaacctc-aa i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68684462 20 + 74645514 tcc-cgaactcccaacctc-aa i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30735013 20 - 75148670 tcc-cgaactcccaacctc-aa i chlSab2.chr16 C 0 C 0 e calJac3.chr6 114240315 11 - 158406734 I a score=1451315.000000 s hg38.chr17_GL383566v1_alt 84147 561 + 90219 gcaatcctcctgcctca--g--cctcccaaag-tact-ggagctacaggcatgtg-ccatcacgccTTgct-aatttttgta-----ttttttgtgtgtgtgtaaagacaaggtcttactatgttgcccaggttggtcttgtactcctgggtttatgtgatcctcctgcctgggcctcccaaagtgctgggattacaggcgggagccacagtgcctggtccacttgagcatttagaacagaaggacttaaaggcggggaactagttacacagatgatgggagaggtgaaggccagacagggaacagagaggcaatcAGCAGGAAATCAAAGTGGTGTGGGCTTATACAGCCCTCTAAa------ggtatggatgcaatgattcatttagaat---gagaaaataaataacagcaaattataaattataagcagctgttaaatatcacaaacatcactacatgcagaagagtaccagtcaa-ctgtcagtcatatctccaaagttctatttctcccacatttttggcattacttcttcaatatgatgactttgtaatatcgttttctatttcgagaacagaaaac s panTro4.chr17 76275028 561 + 82630442 gcaatcctcctgcctca--g--cctcccaaag-tact-ggagctacaggcatgtg-ccatcacgccTTgct-aatttttgta-----ttttttgtgtgtgtgtaaagacaaggtcttactatgttgcccaggttggtcttgtactcctgggtttatgtgatcctcctgcctgggcctcccaaagtgctgggattacaggcgggagccacagtgcctggtccacttgagcatttagaacagaaggacttaaaggcggggcactagttacacagatgatgggagaggtgaaggccagacagggaacagagaggcaatcAGCAGGAAATCAAAGTGGCGTGGGCTTATACAGCCCTCTAAa------ggtatggatgcaatgattcatttagaat---gagaaaataaataacagcaaattataaattataagcagctgttaaatatcacagacatcactacatgcagaagagtaccagtcaa-ctgtcagtcatatctccaaagttctatttctcccacatttttggcattacttcttcaatatgatgactttgtaatatcattttctatttcgagaatagaaaac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67370765 570 + 73212453 gcgatcctcctgcctcg--ggccttcccaaagttactgggagctataggcatgtgcccatcacgccttgctaaatttttgtatt--tttttttttttttttgtaaagacatggtcttactatgttgcccaggttggtcttgtacttgtgggtttgtgtgatcctcctgcctgggcctcccaaagtgctgggattacaggcgggagccacagtgcctggtccacttgagcatttagaacagaaggacttaaaggtggggaacttgttacacagatgatcggagaggtgaaggccagacagggaacagagaggcaatcAGCAGGAAATCTAAGTCGTGTGGGCTAATACAGCCCTCTAAa------ggtatggatgcaatgatttatttagaat---gaggaaatagataacaaaaaattataaattataagcagccgttaaatatcacaaacatcactacatgcagaagagtaccagtcaa-ctaccagtcatatctccaaagttctatttctcccatatttttggcattacttcttcaatatgatgactttgtaatatcgttttctatttcgagaatagaaaac i ponAbe2.chr17 C 0 C 0 s nomLeu3.chr14 3707126 560 - 94967081 gcgatcctcccacctca--g--cctcccaaag-tact-ggagctataggcgtgtg-tcgtcatgccTTgct-aatttttgtatt--attattattttttttgtaaaggcagggtcttactatgttgcccaggtgagtcttgtactcctgggtttatgtgatgctcctgcctgggcctccaaaagtgctgtgattacaggcgggagccacagtgcctggtccacttgggcatttagaacagaaggacttaaaggcggggaagttgttacacagatgatcggagaggtgaaggccagac--ggaatagagaggcaatcAGCAGGAAATCAAAGT--CGTGGGCTTATGCAGCCCTCTAAa------ggtatggatgcaatgattcctttagaat---gagaaaataaataacaacaaattataaattataagcagctgttaaatatcacaaacatcagtacatgcagaagagtaccaggcaa-ctaccagtcatatctccaaagttctatttctcccacatttttggcattacttcttcaatatgatgactttgtaatatcgttttctatttcgagaacagaaaAC i nomLeu3.chr14 C 0 N 0 s rheMac3.chr16 74868764 555 + 80904711 gtgatcctgcagcctgg--g--tctcccaaag-tgct-gggattacaggcttgag-ccaccgcgcccggc----------------cTAttttttttttttgaaaagacagggtcttactatgttgcccaggctggtcttacattcctgggtttatgtgatcctgctgcctgggtctcccaaagtgctgggattataggcgggagccacagtgcctggtcCACctgagcatttagaacagaaggactgaaaggcagggagcttgttacacagaggatcggagaggtgaaggccggacagggaacagaaaggcaatcagcaggagatcagAGTCGTGTAGACTTATGCAGCCTTCTAAG------ggtatggatgcaatgattcactcagaatttcgagaaagcaaataacaacaaatgataaattataagcagctgttaaatatcacaaacatcactacatgcaaaagagtatcagtcaagttacctgtcatagctccaaagttatatttctcccacatttttggcattacttcttcaatatgatgactttgtaatatcgttttctattttgagaatagaaaac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74678501 563 + 80997621 gcagtcct---gcctca--g--cctcccaaag-tact-ggagctacaggcatgtg-ccatcacaccctgcT-AATTTTTGTA----TttttttttttttttgtaaagacagggtcttactatgttgcccaggctggtcttacattcctgggtttatgtgatcctgctgcctgggtctcccaaagtgctgggattataggcgggagccacagtgcctggtcCACctgagcatttagaacagaaggactgaaaggcagggagcttgttacacagaggatcggagaggtgaaggccggacagggaacagaaaggcaatcggcaggagatcagAGTCGTGTAGACTTATGCAGCCTTCTAAG------ggtatggatgcaatgattcactcagaatttcgagaaagcaaataacaacaaatgataaattataagcagctgttaaatatcacaaacatcactacatgcaaaagagtatcagtcaagttacctgtcatagctccaaagttatatttctcccacatttttggcattacttcttcaatatgatgactttgtaatatcgttttctattttgagaatagaaaac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68684482 559 + 74645514 gcagtcct---gcctca--g--cctcccaaag-tact-ggagctacaggcatgtg-ccatcacaccctgct-aatttttgt-----attttttttttttttgtaaagacagggtcttactatgttgcccaggctggtcttgcactcctgggttTATGTGATCctgctgcctgggcctcccaaagtgctgggattacaggcgggagccacagtgcctggtccaCCTGAGCATTTAGAACAGAAGGACTGAAAGGCAGGGAGCTTGTTACACAGAGGATCGGAGAGGTGAAGGCCGGACAGGGAACAGAGAGGCAATCGGCAGGAGATCAGAGTCGTGTGGACTCATGCAGCCTTCTAAA------GGTATGGATGCAATGATTCACtcagaat---gagaaaacaaataacaacaaatgataaattataaGCAGCTGTTAAATATCACAAACATTACTACATGCAAAAGAGTATCAGTCAAGTTACCTGTCATAGCTCCAAAGTTATATTTCTCCCACATTTTTGGCATTACTTCTTCAATATGATGACTTTGTAATATCGTTTTCTATTTTGAGAATAGAAAAC i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30735033 567 - 75148670 gcagtcctcctgcctca--g--gctcccaaag-tact-agagctacaggcatgtg-ccatcacaccctgcT-AATTTTTGTATTTTTttttttttttttttgtaaagatagggtcttactatgttacccaggctggtcttgcactcctgggtttatgtgatcctgctgcctgggcctcccaaagtgctgggattacaggcgggagccacagtgcctggtcCACCTGAGCATTTAGAACAGAAGGACTGAAAGGCAGGGAGCTTGTTACATAGAGGATCGGAGAGGTGAAGGCCGGACAGGGAACAGAGAGGCAATCGGCAGGAGATCAGAGTCGTGTGGACTTATGCAGCCTTCTAAa------ggtatggatgcaacaattcactcagaat---gagaaaacaaataacaacaaatgataaattgtaagcagctgttaaatatcacaaacatcactacacgcaaaagagtatcagtcaagttacctgtcatagctccaaagttatatttctcccacatttttggcgttacttcttcaatatgatgactttgtaatatcgttttctattttgagaatagaaaac i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114240326 527 - 158406734 gcgatctt---ggctcaccg--cctcccgagt-agct-gggactacaggtgcgta-ccaccatgcccagct-aattttt-------tttgttgtatttttagtagagacggggtttcaccatgttgaccaggatggtcttgatctcttgacct--cgtgatccacccgcctcggcctcccaaagtgctgggattataggcttgagccaccgcacccggcc------------------------------AGGCATAGAACTTATTATACAGATGATCGGAGTGGTGAAGGCCAGACGAGGAATGGAGAGGCAATCGGCAGGACATCAAAGTCATGTGGGCTTATACTGCTCTTGAAATCCCCGGGTATAGAGGCAATGattcatttagagt---gagaaa----ataacaagaaattataaactacaagcagctgttaaatatcacagacatcaataaatgcagaagtgtatcagtcaa-ctaccagtcacatctccaaaataatatttcttcctca-tttggacgttacttcttcaatatgatgactttgtaatattgttttctactttgagaacagaaaag i calJac3.chr6 I 11 C 0 a score=219757.000000 s hg38.chr17_GL383566v1_alt 84708 92 + 90219 tgatcaggctggacacagtggctcgtgcctgtaatcccagcactttgggaggccaaggcaggtggatcacttgaggccaggagttcaagacc s panTro4.chr17 76275589 92 + 82630442 tgatcaggctggacacagtggctcgtgcctgtaatcccagcactttgggaggccaaggcaggtggatcacttgaggccaggagttcaagacc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67371335 92 + 73212453 tgatcaggctggacacagtggcttgtgcctgtaatcgcagcactttgggaggccaaggcaggtggatcacttgaggccaggagttcaagacc i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74869319 92 + 80904711 taatCAggctggacacagtggctcatgcctgtaatcccagtacttttggaggccaaggcaggaggatcacttaagaccaggagttcaagacc i rheMac3.chr16 C 0 I 484 s macFas5.chr16 74679064 92 + 80997621 taatcaggctggacacagtggctcatgcctgtaatcccagtactttgggaggccaaggcaggaggatcacttgagaccaggagttcaagacc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68685041 92 + 74645514 TAatcaggctggacacagtggctcatgcctgtattcccagtactttgggaggccaaggcaagaggatcacttgaggccaggagttcaagacc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30735600 92 - 75148670 taatcaggctggacacagtggctcatgcctgtaatcccagtactttgggaggccaaggcaggaggatcacttgaggccaggagttcaagacc i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114240853 92 - 158406734 caatcaggctgggcgcagtggctcatgcctgtagtcccagcactttgggaggccaaggcaggtggatcactttaagccaggagttccagttc i calJac3.chr6 C 0 C 0 a score=651037.000000 s hg38.chr17_GL383566v1_alt 84800 388 + 90219 ggtccgggcagcgtggcgaaaccccgtctctactaaaaatacaaaaactagcagggcatggtggcatacacctgtagtcccagttacttaggaggctgaggtgggaggattgcttgagcccaggaggtcgaggctgcagtgagccgtgatcatgccactgcactccagcctgggtgagagagtgagaccatgtctcaaaaaaaaaa------------------------aaaaaacaacaaaaaaaaaCATAggctgggcgtggtggctcacgcctgtaattccagcactgtgggaggttgagatgggcggatcacttgaggtcaggagtttgaaaccagcctggtcaacatggtgaaaccccatctctaccaaaaacataaaaaattagccaggtgtgatgacgcacgcc s panTro4.chr17 76275681 388 + 82630442 ggtccgggcagcgtggcgaaaccccgtctctactaaaaatacaaaaactagcagggcatggtggcatacacctgtagtcccagttacttaggaggctgaggtgggaggattgcttgagcccaggaggtcgaggctgcagtgagccgtgatcatgccactgcactccagcctgggtgagagagtgagaccatgtctcaaaaaaaaaa------------------------aaaaaaaaaaaaaaaaaaaCATAggctgggcgtggtggctcacgcctgtaattccagcactgtgggaggttgagatgggcggatcacttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctctaccaaaaatataaaaaattagccaggtgtgatgacgcacgcc i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67371427 368 + 73212453 ggtccgggcagcatggtgaaaccccgtctctactaaaaatacaaaaattaccagggcatggtggcatacacctgtagtcccagttacttagggggctgaggtgggaggattgcttgagcccaggaggtcgaggctgcagtgagccgtgatcatgccactgcactccagcctgggcgaaagagtgagaccctgtctcaaaaaaaaaa--------------------------------------------aTTggctgggcgtggtggctcatgcctgtaattccagcactgtgggaggttgagatgggcggatcacttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctctaccaaaaatataaaaaattagccaggtgtgatggcgcatgcc i ponAbe2.chr17 C 0 C 0 s macFas5.chr16 74679156 378 + 80997621 agtttgggcatcatggtgaaaccccatctctactaaaaatacaaaacttagcagggcatggtggcatacacctgcagtcccagttacttaggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgagccatgatcatgacaatgcactccagtctgggcgagagactgagaccctgtctcaaaaaaaaaa----------------------------------aaaaaaaaaaaaaggccgggcgtggtggctcatgcctgtaattccagcactgtgggaggctgagatgggcagatcacttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctctaccaaaaatataaaaaattagccaggtgtgatggcacatgcc i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68685133 378 + 74645514 agtttgggcatcatggtgaaaccccatctctactaaaaatacaaaacttagcagggcatggtggcatacacctgcagtcccagttacttaggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgagccatgatcatgacaatgcactccagtctgggcgagagactgagaccctgtctcaaaaagaaaa----------------------------------aaaaaaaaaaaaaggccgagcgtggtggctcatgcctgtaattccagcactgtgggaggctgagatgggcagatcacttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctctactaaaaatataaaaaattagccaggtgtgatggcacatgcc i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30735692 376 - 75148670 agttcgggcatcatggtgaaaccccatctctactaaaaatacaaaacttagcagggcatggtggcatacacctgcagtcccagttacttaggaggctgagatgggaggattgcttgagcccaggaagttgaggctgcagtgagccgtgatcatgacgatgcactccagtctgggcgagagactgagaccctgtctcaaaa--aaaa----------------------------------aaaaaaaaaaaaGggccgggtgtggtggctcatgtctgtaattccagcactgtgggaggctgagatgggcagatcacttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctctaccaaaaatataaaaaattagccaggtgtgatggtgcacgcc i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114240945 412 - 158406734 agtctgggcagcatggtgaaaccttgtctctactgaaaatacaataattagcagggcatggtggcacacacctgtagtcccagttactcaggaggctgaggtaggaggatcgcttgaacccaggaggtcgaggctacagtgagccgtgaccatgctactgcatgctagcctgggtgagagagcaagatcctgtctcaagaaagaaagaaagaaagagagagagagagagaaagaaagagaaagaaagaaaaaaggccgggcacggtggctcacgcctgtaattccagcactttgggaggctgagatgggtggttcacttgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccccatctctaccaaaaatataaaaaattagccaggtgtggtggcacatgcc i calJac3.chr6 C 0 C 0 e rheMac3.chr16 74869411 484 + 80904711 I a score=1891960.000000 s hg38.chr17_GL383566v1_alt 85188 843 + 90219 tgtaatcccagctacttgggaggctgaggcaggagaatggcttgaacccaggaggcagaggttgcagtgggccaagatcgtgccattgcactccagcctgggcaacagagtgagact-ccatctc------------aaaaataaataaataaataaagcgaatgaatctccttagttgatcaaattttgtttttatttttggtagttgggatgtatacaaaagtggcggtcaacatggagttggtggtgctgctacaa--ttgttttgttcaagatacacaggaattctggtaaatcctgtttttttc-------tttttttttaaatgtgattcccatcaagaaagaagtaggaaaatgggggagatttctaactgcatatgaggcatttgtgcatgtatttctgaccagagagacttttctgttttgactccacattgaaggaactgaatcctttgcttacaacttcacctctggtgatgggagtaattttccacagatttgcttctggacccgtgcatttcaaatcttgcttctctccactgcgcacg-tttttccggcgccaggcaccgcaggatatgttcgtgtcttgtgatttttgattctgcgcggtaggtggaattggaacggtgagtggagcgagtattgctggaatccgtttccacaccgggatagcgagcagtaactgaactatacatggaaataaatgggaactacataaatataacccgaccaaagccaaactaaatatctttccagttcaacttctccttagcaggagcccccacgtggcagcaagcctccgtttccacctcacacaagagaaaatgtgacgggcaggaactcaagactggaaatgaacgg s panTro4.chr17 76276069 842 + 82630442 tgtaatcccagctacttgggaggctgaggcaggagaatggcttgaacccaggaggcagaggttgcagtgggccaagatcgtgccattgcactccagcctgggcaacagagtgagact-ccatctc------------aaaaataaataaataaataaagcgaatgaatctccttagttgatcaaattttgtttttatttttggtagttgggatgtatacaaaagtggcagtcaacatggagttggtggtgctgctacaa--ttgttttgttcaagatacacaggaattctggtaaatcctgtgttttt--------tcttcttttaaatgtgattcccatcaagaaagaagtaggaaagtgggggagatttctaactgcatatgaggcatttgtgcatgtatttctgaccagagagacttttctgttttgactccacattgaaggaactgaatcctttgcttacaacttcacctctggtgatgggagtaattttccacagatttgcttctggacccgtgcatttcaaatcttgcgtctctccactgcgcaca-tttttccggcgccaggcaccgcaggatatgttcgtgtcttgtgatttttgattctgcgcggtaggtggaattggaacggtgagtggagcgagtattcctggaatccgtttccgcaccgggatagcgagcagtaactgaactatacatggaaataaatgggaactacataaatataaccctaccaaagccaaactaaatatctttccagttcaacttctccttagcaggagcccccacgtggcagcaagcctccgtttccacctcacacaagagaaaatgtgacgggcaggaactcaagactggaaatgaacgg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67371795 849 + 73212453 tgtaatcccagctacttgggaggctgaggcaggagaacggcttgaacccgggagacagaggttgcagtgggccaagatcgtgccgctgcactccagcctgggcaacagagtgaaactcccatctc------------aaaaataaataaataaataaagcgaatg-atctccttagttgatcaaattttgtttttatttttggtag-tgggatgtatacaaaagtggtggtcaacatggagttggtggtgctgctacaa--ttgttttgttcgagaaacacaggaattctggtaaatcctgttttttgtttttttgtttttttttaaatgtgattcccatccagaaagaagtaggaaagtgggggatatttctaactgcatatgaggcatttgtgcatgtatttctgaccagagagacttttctgttttgactccacattgaaggaactgaatcctttgcttacaacttcacctctggtgatgggagtaattttccccagatttgcttctggacccgtgcatttcaaatcttgcttctctccactgcgcaca-tttttccggcgccaggcaccacaggatgtgttcgtgtcttgtgatttttgattctgcgcggtaggtggaattggaacggtgagcggagcgagtattcctggaatccatttccgcaccggggtagtgagcagtaactgaactatacgtggaaataaatgggaactacataaatataacccgaccaaagccaaactaaatatctttccagttcaacttctccttagcaggagcccccacgtggcagcaagcctccgtttccacctcacacaagagaaaatgtgaccggcaggaactcaagactggaaatgaacgg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74869895 819 + 80904711 tgtaatcccagctacttgggaggctgaggcaggagaatggcttgaacccaggaggcagaggtttcagtgagccaagatcatgccactgcactccagcctgggcaacagagtaagact-ccatctc--------ataaataaataaataaataaataaaGCAAATTAATCTCCCtagttgatcaaatttcattttta-ttttggtagttgggatgtatataaaagtggcggtcaacacacagttggtggtgctggtacaa--tttttttgttcaagaaacacaggagttctggtaaatcctatttt-----------ttttttttttaatgtgattcccatcaagaaagagagaggaaagtgggggatattgctaat-----------------------tatttctgtccagagagacttttctgttttgactccacattgaaggaattgaatcatttgcttactactttgcctctggtgatgggagtaattttccacagatttgcttctggacctgtgcatttcaagtcttgcttctctccactgcgcaca-tttttccggcgccaggcaccgcaggatatgttcgtgtcttgtgatttttgattctgcgcggtaggtggaattggaacggtgagcggagcgagtattcctggaatccatttccgcaccggaatagcgagcattaactgaactatacatggaaataaatgggaactacataaatataacccgactaaagccaaactaaatatctttccaattcaacttctccttagcaggagcccccacatggcagcaagcctccgtttccacctcacacgagagaaaatgtgacgggcaggaactcaagactggaaatgaacgg i rheMac3.chr16 I 484 C 0 s macFas5.chr16 74679534 818 + 80997621 tgtaatcccagctacttgggaggctgaggcaggagaatggcttgaacccaggaggcagaggtttcagtgagccaagatcatgccactgcactccagcctgggcaacagagtaagact-ccatctc--------ataaataaataaataaataaataaaGCAAAttaatctccctagttgatcaaatttcattttta-ttttggtagttgggatgtatacaaaagtggcggtcaacacagagttggtggtgctgctacaa--tttttttgttcaagaaacacaggagttctggtaaatccta-ttt-----------ttttttttttaatgtgattcccatcaagaaagagagaggaaagtgggggatattgctaat-----------------------tatttctgtccagagagacttttctgttttgactccacattgaaggaattgaatcatttgcttactactttgcctctggtgatgggagtaattttccacagatttgcttctggacctgtgcatttcaaatcttgcttctctccactgcgcaca-tttttccggcgccaggcaccgcaggatatgttcgtgtcttgtgatttttgattctgcgcggtaggtggaattggaacggtgagcggagcgagtattcctggaatccatttccgcaccggaacagcgagcattaactgaactatacatggaaataaatgggaactacataaatataacccgactaaagccaaactaaatatctttccagttcaacttctccttagcaggagcccccacatggcagcaagcctccgtttccacctcacacgagagaaaatgtgacgggcaggaactcaagactggaaatgaacgg i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68685511 825 + 74645514 tgtaatcccagctacttgggaggctgaggcaggagaatggcttgaacccaggaggcagaggtttcagtgagccaagatcatgccactgcactccagcctgggcaacagagtaagact-ccatctcaaaaataaataaataaataaataaataaataaataaaattaatctccCTAGTTGatcaagtttcattttta-ttttggtagttGGGATGTATACAAAAGTGGCGGTCAACACAGAGTTGGTGGTGCTGCTACAA--tttttttGTTCAAGAAACACAGGAGTTCTGgtaaaccct--ttt-----------ttttttttttaatgtgattcccatcaagaaagagagaggaaagtggGGGATATTGCTAAT-----------------------TATTTCTGTCCAGAGAGACTTTTCTGTTTTGACTCCACATTGAAGGAATTGAATCCTTTGCTTACTTCTTCGCCTCTGGTGATGGGCGTAATTTTCCACAGATTTGCTTCTGGACCTGTGCATTTCAAATCTTGCTTCTCTCCACTGCGCACA-TTTTTCCGGCGCCAGGCACCGCAGGATATGTTCGTGTCTTGTGATTTTTGATTCTGCGCGGTAGGTGGAATTGGAACGGTGAGTGGAGCGAGTATTCCTGGAATCCATTTCCGCACCGGGATAGCGAGCATTAACTGAACTATACATGGAAATAAATGGGAACTACATAAATATAACCCGACTAAAGCCAAACTAAATATCTTTCCAGTTCAACTTCTCCTTAGCAGGAGCCCCCACATGGCAGCAAGCCTCCGTTTCCACCTCACACGAGAGAAAATGTGATGGGCAGGAACTCAAGACTGGAAATGAACGG i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30736068 827 - 75148670 tgtaatcccagctacttgggagattgaggcaggagaatcgcttgaacccaggaggcagaggtttcagtgagccaagataatgccactgcactctagcctgggcaacagagtgagact-ccatctcaaaaacaaacaaacaaataaataaataaataaagcaaattaatctccctagttgatcaaatttcattttta-ttttggtagttgggatgtatacaaaagtggcggtcaacacggagttggtggtgctgctacat--tttttttgttcaagaaacacaggagttctggtaaatcctatata-----------tatattttttaatgtgattcccatcaagaaagagggaggaaagtgggggatattgctaac-----------------------tatttctgtccagagagacttttctgttttgactccacattgaaggaattgaatcctttgcttactactttgcctctggtgatgggagtaattttccacagatttgcttctggacccgtgcatttcaaatcttgcttctctctactgcgcaca-tttttccggcgccaggcaccgcaggatatgttcgtgtcttgtgatttttgattctgcgcggtaggtggaattggaacggtgagcggagcgagtattcctggaatccatttccgcaccgggatagcgagcattaactgaactatacatggaaataaatgggaactacataaatataacccgactaaagccaaactaaatatctttccagttcaacttctccttagcaggagcccccacatggcagcaagcctccgtttccacctcacacgagagaaaatgtgacgggcaggaactcaagactggaaatgaacgg i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114241357 836 - 158406734 tgtaatcccagctacttgggaggctgaggcaggagaatggcttgaacccaggaggcagaggttgcagtgaatcaaggtcgtgccaccacactccagcttgcacgacagagcaagact-ccatctc--------aaaaaaataaaaattaa-aaaaaaagctcattaatctcccttgttgatcaaatttcgtttttatttttggtatttgggatgtatacaaaagtggcagttgatgcggagttggtggtgcagctacaatttttttttgttggagaaatacaggaattctggtaaatccta---------------tattttttttaatgtgattcccatcaagaaagaagtagggaagtgggggttacttctgattgcatatgaggcattcgtgcacgtgtttctgaccagagagacttttctgttttg-----acattgaaggaactgaaccctttgcttacagcctcacctctggtgatgggagtaattttccacagctttgcctctggacccgagcacttcaaatctcgcctctctccactgcgcacattttttccggcgccaggcaccgcaggacatgttcgtgtcttgtgatttttgattctgcgcggtaggtggaattggaacggtgagcggagcgagtattcctggaatccgtttccgcaccgggatggcaagcaataactgaactatacatggaaataaatgggaaccacataaatataacctgatgaaagccaaactaaatatctttccagctcagcttctccttagcaggagcccccatgtggcagcaagcctccgtttccacctcacaggagagaaagtgtgacgggtgggaactcgaggctggaaatgaacag i calJac3.chr6 C 0 I 1642 a score=1332634.000000 s hg38.chr17_GL383566v1_alt 86031 614 + 90219 ggacgttaattg-attgtagggaaaatattttccattttgtaaattttacaaa--aaatgtttgaccct-gtggacatgtggttagggcccttctc-----agtgccttgagagggaaccatgcaggtagagggA--GGGTTCTTAGCATTGTG-ggggtgacctggagattggcagcagg-gt-gccaccaccac-ccctaggt---ggggatgagagggaggaagtcctgtgaccagagtccaggggcc--agagtcacctgctgggagcccaaacaaagg-tgggactctggcaggagctggaactacac-agaggaccacctctcc-tgctggagaagctgtctgaggcagaggaggtggagagctcccgc-gccctcccttgcttccacctcccaggttcctcc-caagcctctcgttggttgaacccagcccaaagccagc-aggcctggggacctggacacctgagccagcaga-ggtcggcgtttctcccacacaaaggagggcacaagaagtgggaggcacggag---ggggatcaggccaggacccacacaGGATGTGCAAACAGGAGCTCCCCTCTCTTCCCACCCCAAATGGCATCTGCAGCCGGCCTCACTTCCCTGCTGTTAGACAGGAA s panTro4.chr17 76276911 614 + 82630442 ggatgttaattg-attgtagggaaaatattttccattttgtaaattttacaaa--aaatgtttgacccc-gtggacatgtggttagggcccttctc-----agtgccttgagagggaaccatgcaggtagagggA--GGGTTCTTAGCATTGTG-ggggtgacctggagattggcagcagg-gt-gccaccaccac-ccctaggt---tgggatgagagggaggaagtcctgtgaccagagtccaggggcc--agagtcacctgctgggagcccaaacaaagg-tgggactctggcaggagctggaactacac-aaaggaccacctctcc-tgctggagaagctgtctgaggcagaggaggtggagagctcccgc-gccctcccttgctcccacctcccaggttcctcc-caagcctctcgttggttgaacccagcccaaagccagc-aggcctggggacctggacacctgagccagcaga-ggttggcgtttctcccacacaaaggagggcacaagaagtgggaggcacggag---ggggatcaggccaggacccacacaGGATGTGCAAACAGGAGCTCCCCTCTCTTCCCACCTCAAATGGCATCTGCAGCCGGCCTCACTTCCCTGCTGTTAGACAGGAA i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67372644 610 + 73212453 ggatgttaattg-attgtagggaaaatattttccattttgtaaattttacaaa--aaatgtttgaccct-gtggacatgtggttagggcccttctc-----agtgccttgagagggatccatgcaggtagagggA--GGGTTCTTAGCATTGTG-ggggtgacctggagattggcagcagg-gt-gccaccaccac-ccctaggt---tgggacgagagggaggaagtcctgtgaccagagtccaggggcc--agagtcacctgctgggagcccaaacaaagg-tgggactctggcaggagctggaactacac-aaaggaccaactctcc-tgctggagaagccgtctgaggcagaggaggtggagagctcccgc-gccctcccctgctcccacctcccgcg-ccctcc-caagcctctcgttggttgaacccagcccaaagccagc-aggcctggggacctggacacctgagccagcaga-ggt---cctttctcccacacaaaggagggcacgagaagtgggaggcacggag---ggggatcaggccaggccccacacaGGATGTGCAAACAGGAGCTCCCCTCTCTTCCCACCCCAAATGGCATCTGCAGCCGGCCTCACTTCCCTGCTGTTAGACAGGAA i ponAbe2.chr17 C 0 M 404 s rheMac3.chr16 74870714 615 + 80904711 ggatgttaattg-atcgtagggaaaatattttccattttgtaaattttacaaa--aaatgtttgacccc-gtggacatgtggttagggcccttctc-----ggtgccttgagagggacccatgcaggCAGAGGAA--GCGTTCTTTGCATTGCG-ggggtgacctggagattggcagcagg-gt-gccaccaccag-ccctaggt-caggggatgagagggaggaaggcctgtgaccagagtccaggggcc--agagtcacctgctgggagcccaaacaaagg-tgggactctggcaggagctggaactacac-aaaggaccaaccctcc-tgctggagacgccgtcttaggcagaggaggtggagagctcccgc--ccctccctggctcccacctcccaggctcctcc-ccagcctatcattggttgaacccagcccaaagccagc-aggcctggggtcctggacacctgagccagcaga-ggtcggcatttctcccatacaaaggagggcacgagaagtgggaggcacggag---ggggatcaggccaggacctgcacaGGATGTGCAAAGAGAAGCTCCCCTCTCTTCCCACTCGAAATGGCATCTGCAGCCGGCCTCACTTCCCCACTGTTAGATAGGAA i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74680352 615 + 80997621 ggatgttaattg-atcgtagggaaaatattttccattttgtaaattttacaaa--aaatgtttgacccc-gtggacatgtggttagggcccttctc-----ggtgccttgagagggacccatgcaggCAGAGGAA--GCGTTCTTTGCATTGCG-ggggtgacctggagattggcagcagg-gt-gccaccaccag-ccctaggt-caggggatgaaagggaggaaggcctgtgaccagagtccaggggcc--agagtcacctgctgggagcccaaacaaagg-tgggactctggcaggagctggaactacac-aaaggaccaaccctcc-tgctggagacgccgtcttaggcagaggaggtggagagctcccgc--ccctccctggctcccacctcccaggctcctcc-ccagcctatcattggttgaacccagcccaaagccagc-aggcctggggtcctggacacctgagccagcaga-ggtcggcatttctcccatacaaaggagggcacgagaagtgggaggcacggag---ggggatcaggccaggacctgcacaGGATGTGCAAAGAGAAGCTCCCCTCTCTTCCCACTCGAAATGGCATCTGCAGCCGGCCTCACTTCCCCACTGTTAGATAGGAA i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68686336 615 + 74645514 GGATGTTAATTG-ATCGtagggaaaatattttccattttgtaaattttacaaa--aaatgttTGACCCC-GTGGACATGTGGTTAGGGCCCTTCTC-----GGTGCCTTGAGAGGGACCCATGCAGGCAGAGGAA--GATTTCTTTGCATTGTG-GGGGTGACCTGGAGATTGGCAGCAGG-GT-GCCACCACCAG-CCCTAGGT-CAGGGGATGAGAGGGAGGAAGGCCTGTGACCAGAGTCCAGGGGCC--AGAGTCAGCTGCTGGGAGCCCAAACAAAGG-TGGGACTCTGGCAGGAGCTGGAACTACAC-AAAGGACCAACCCTCC-TGCTGGAGACGCCGTCTTAGGCAGAGGAGGTGGAGAGCTCCCGC--CCCTCCCTGgctcccacctcccaggctcctcc-CCAGCCTATCATTGGTTGAACCCAGCCCAAAGCCAGC-AGGCCTGGGGTCCTGGACACCTGAGCCAGCAGA-GGTCGGCATTTCTCCCATACAAAGGAGGGCACGAGAAGTGGGAGGCACGGAG---GGGGATCAGGCCAGGACCTGCACAGGATGTGCAAAGAGAAGCTCCCCTCTCTTCCCACCCGGAATGGCATCTGCAGCCGGCCTCACTTCCCCACTGTTAGCTAGGAA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30736895 615 - 75148670 ggatgttaattg-atcgtagggaaaatattttccattttgtaaattttacaaa--aaatgtttgacccc-gtggacatgtggttagggcccttctc-----agtgccttgagagggacccatgcaggCAGAGGAA--GGGTTCTTTGCATTGTA-ggggttacctggagattggcagcagg-gt-gccaccaccat-ccctaggt-cagggggtgagagggaggaaggcctgtgaccagagtccaggggcc--agagtcacctgctgggagcccaaacaaagg-tgggactctggcaggagctggaactacac-aaaggaccaaccctcc-tgctggagacgcattcttaggcagaggaggtggagagctcccgc--ccctcccttgctcccacctcccaggctcctcc-ccagcctatcgttggttgaacccagcccaaagccagc-aggcctggggtcctggacacctgagccagcaga-ggtcggcatttctcccatacaaaggagggcatgagaagtgggaggcacggag---ggggatcaggccaggacctgcacaGGATGTGCAAAGAGAAGCTCCCCTCTCTTCCCACCCGAAATGGCATCTGCAGCCGGCCTCACTTCCCCACTGTTAGCTAGGAA i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114243835 640 - 158406734 GGATGTTAAATATATTGGTGGTAAAATATTTTCCAATCTATTAATATTACAAAGGAAATATTTGACCCCAGAGGACAAGTGGTTAGGGCCCATCCCATTTTAGTTCATGGAGAGGGATTTCGTCAGGCCAGGAAAATGGTTTCTTAGCATAGggtaggaccacatggaga-tggcagcaagcgtagcaactaccggtccctaagttcagggg--gagagagaagaagtctggagacctgagttccagagcccaagagtcccttttttggaccccaagcaaaagttgggactctggcaggcgctagggtgacacaaaaggacaaacccttcatgctatagaaaccttccgaggcagaggcagcggagagctccccaggccctccactgctcccacttcataggctcctttacaagccttttgttggatgaatccagcccaaagccagcaaggtatggggacctggacacctgagccagcagagggtcagcatttctcccaaacaaaggagggcacaagaagggggaggtacggggggtggtgatcaggccaggaccctcacaGGATGTGCAAACAGGAGCTCCCCTCTCTTCCCACCCCAAATGGCATCTGCAGCTAGCCTCACGCCCCT-CTGTCAGATAGTGA i calJac3.chr6 I 1642 C 0 a score=1150829.000000 s hg38.chr17_GL383566v1_alt 86645 691 + 90219 GAGGAACCTTGTTCCCGGCACCAGCTGCCCCCACCGCCCCCCACCCCACGGAGGCCCCTTTCCTCTCTGGCCTTTGCTTGCAATCATTGGCGACGCTGATGGACCATATCTTCTGGGGAGTTTGGTCATGAACATGGTTTCCCATTtgttgtggaccaaactgtgcccttccccttgaattcctgcgttgaagccctaactcccaatgcagctgtaattgaagatagggcttttagggaggtaattaaggttaaatgaagtcatagggcaggaccctaatctaataggattgatgtccttataagaagagggagagacaccagagatctctcctcccccctcacttgtaaacagaggaaaaatga-cggaggacacagcagggaggtgggtacaagccaggaagaggggcctcgccgggaactaaccctgacggcaccttgatccgggactttgggcctctcaaactgagaaatacatgtctgttgtttaagtcactccctccacagtaatctggatggcagcctgagcttaccaaGGCACCGtctgcatcagccagggctctccagggagacagccaataggagatggatggatggatggatgGCtagat----agacagacaagcggac--agagagagagagagacaggcagaca--------cagacag----acaggcagacaaatggctagatagacaagcaga s panTro4.chr17 76277525 697 + 82630442 GAGGAACCTTGTTCCCGGCACCAGCTGCCCCCACCA-CCCCCACCCCACGGAGGCCCCTTTCCTCTCTGGCCTTTGCTTGCAATCATTGGCGACGCTGATGGACCATATCTTCTGGGGAGTTTGGTCATGAACATGGTTTCCCATTtgttatggactgaactgtgcccttcgccttgaattcctgcgttgaagccctaactcccaatgcagctgtaattgaagatagggcttttagggaggtaattaaggttaaatgaagtcatagggcaggaccctaatctaataggattgatgtccttataagaagagggagagacaccagagatctctcttccccccttacttgtaaacagaggaaaaatgaccggaggacacagcagggaggtggctacaagccaggaagagaggtctcgccgggaactaaccctgacggcaccttgatctgggactttgggcctctcaaactgagaaatacatgtctgttgtttaagtcactccctccacagtaatctggatggcagcctgagcttaccaaGGCACCGtctgcatcagccagggctctccagggagacagccaataggagatggatggatggatggatggctagat--------agaCAAGCGGACAGAGAGAGAGAGAGAGACAGACAGACacagacaggcagacag----acaggcagacaaatggctagatagacaagcaga i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74871329 682 + 80904711 GAGGAACCTTGTTCCTGGCATCAGCCGCCAC------------CCCCACGGAGGCCCCTTTCCTCTTTGGTCTTTGCTTGCAATCACTGGCGATGCTGATGGACCGTATCTTCTGGGGAGTTTGGTCATTAACATGGTTTCCCATTtgttatggactgaactgtgccctcccccttgaattcctgcattgaagccctaactcccaatgcagctgtaattgaagatagggcttttagggaggtaattaaggttaaatgaagtcatagggtgggaccctaatctaataggattggtgtccttgtaagaagagggagagacaccagagatctctcttcccccctcgcttgtaaacacagaaaaaatgaccggagaacacagcagggaggtggctacaagccaagaagagaggcctcgctgggaaccaaccttgacggcaccttgatctgggactttgggcctttcaaactgagaaatacatgtctggtgtttaagtcactccctccatggtaatctggatggcagcctgagcTGAACAAAGCACCatctgtatcagccagggctctccagagagacagccaaaaggagatagatggatggatggatgGCTagat----agacagacaa--------acagacagatacagacagatagac----acaggcagaaagataaacaggcagacaaatggctagatagacaagcaga i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74680967 686 + 80997621 GAGGAACCTTGTTCCTGTCATCAGCCGCCAC------------CCCCACGGAGGCCCCTTTCCTCTTTGGTCTTTGCTTGCAATCACTGGCGATGCTGATGGACCGTATCTTCTGGGGAGTTTGGTCATTAACATGGTTTCCCATTtgttatggactgaactgtgccctcccccttgaattcctgcattgaagccctaactcccaatgcagctgtaattgaagatagggcttttagggaggtaattaaggttaaatgaagtcatagggtgggaccctaatctaataggattggtgtccttgtaagaagagggagagacaccagagatctctcttcccccctcgcttgtaagcagagaaaacatgaccggagaacacagcagggaggtggctacaagccaagaagagaggcctcgctgggaaccaaccttgacggcaccttgatctgggactttgggcctttcaaactgagaaatacatgtctggtgtttaagtcactccctccatggtaatctggatggcagcctgagctgaccaaAGCACCatctgtatcagccagggctctccagagagacagccaaaaggagatagatggatggatggatgGCtagat----agacagacaa--------acagacagatacagacagatagacacagacaggcagaaagataaacaggcagacaaatggctagatagacaagcaga i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68686951 682 + 74645514 GAGGAACCTTGTTCCTGGCATCAGCCGCCAC------------CCCCACGGAGGCCTCTTTCCTCTTTGGTCTTTGCTTGCAATCACTGGCGATGCTGATGGACCGTATCTTCTGAGGAGTTTGGTCATGAACATGGTTTCCCATttgttatggactgaactgtGCCCTCCCCCTTGAATTCCTgcattgaagccctaacccccaatgcaGCTGTAATTGAAGATAGGGCTTTtagggaggtaattaaggttaaatgaaatcataaggTGGGACCCTAACCTAATAGGattggtgtccttgtaagaagagggaGAGACACCAGAGATCTCTCTTCCCCCCTCGCTTGTAAACAGAGAAAAAATGACCGGAGGACACAGCAGGGAGGTGGCTACAAGCCAAGAATTGAGGCCTAGCTGGGAACCAACCTTGACggcaccttgatctgggactttgGGCCTCTCAAACTGAGAAATACATGTCTGGTGTTTAAGTCACTCCCTCCATGGTAATCTggatggcagcctgagctgaccaAAGCACCATCTGTATCAGCCAGGGCTCTCCAGAGAGACAGCCAAAAggagatagatggatggatggatggctagat----agacag------------acaggcagatacagacagatagacacagacaggcagaaagataaacaggcagacaaatggctagatagacaagcaga i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30737510 690 - 75148670 GAGGAACCTTGTTCCTGGCATCAGCCGCCAC------------CCCCACGGAGGCCCCTTTCCTCTTTGGTCTTTGCTTGCAGTCACTGGCGATGCTGATGGACCGTATCTTCTGGGGAGTTTGGTCGTGAACGTggtttcccatttgttatggactgaactgtgccctcccccttgaattcctgcattgaagccctaactcccaatgcagctgtaactgaagagagggcttttagggaggtaattaagattaaatgaagtcatagggtgggaccctaatctaataggattggtgtccttgtaagaagagggagagacaccagagatctctcttcccccctcgcttgtaaacagagaaaaaatgaccggagaacacagcagggaggtggctacaagccaagaagagaggcgtcgctgggaaccaaccttgacggcaccttgatctgggactttgggcctctcaaactgagaaatacatgtctggtgtttaagtcactccctccatggtaatctggatggcagcctgagctgaccaaagcaccatctgtatcagccagggctctccagagagacagccaaaaggagatagatggatggatggatgGCtagat----agacagacaagcag----acagacagatacagacagatagacacagacaggcagaaagataaacaggcagacaaatggctagatagacaagcaga i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114244475 687 - 158406734 GAGGAACCTGGTTCCCGGCACCAGCCGCC-C------------CTCTGTGGAGGCCCCTTTCCTCTCTGGCCTTTGCTTGCAGTCACTGGCGACGCAG-TGGACCATGTCTTCTGGGGAGTTGGATCGTGAACGTGGTTTCTCGTGtgttatagactgaactgt-tcctcccccttgaattcctgcgttggagccctaattcccattgcaactgtaattgaagggagggcttttagggaggtaattaaggttaaatgaagtcacagggcgggaccctaatctcataggattggtgtccttgtaagaagagggagagacaccaatgatctctgttcccccgtcgcttgtaaatagaggaaaggtgagtggaggacgcagcaaggaggtggctacaagct--ggaaagaggcctcactgggagccagccccgac--caccttcacctgggactttgggcctctcaaacagagacatgcatttctgttgttgaagtcactctctccacagcaatctgggtggcagcctgagctgaccaaGGCACCATCTGCATCAGCCAGGGCTCTCCAGAGAGACAGCCAACAGGAGGtgggtggatggacggatgggtggatggCTagacagacaagcaaacagacagagagatagagacagatagacacagacgggcagacag----acaggcagacaaatggatagatagagaaacaga i calJac3.chr6 C 0 I 222 e ponAbe2.chr17 67373254 404 + 73212453 M a score=33945.000000 s hg38.chr17_GL383566v1_alt 87336 27 + 90219 cagagagatagagacagacagacacaa s panTro4.chr17 76278222 27 + 82630442 cagagagatagagacagacggacacaa i panTro4.chr17 C 0 C 0 s rheMac3.chr16 74872011 27 + 80904711 cagagagatagagacagacagacacat i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74681653 27 + 80997621 cagagagatagagacagacagacacat i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68687633 19 + 74645514 cagagag--------agacagacagac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30738200 27 - 75148670 cagagagatagagacagacagacacat i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114245384 25 - 158406734 caggaaggc--agacagacagacacag i calJac3.chr6 I 222 C 0 e ponAbe2.chr17 67373254 404 + 73212453 M a score=1606090.000000 s hg38.chr17_GL383566v1_alt 87363 799 + 90219 acaggcaa----acagacaggcagacaaatggat------------agatagatgatagatagccaggcag--gcagatagaca-----------------------------------------cagacaggcagacagacagacagacagatgataggttgggttcagtgactcttacctgtaataaccagcacattggtaggctgaggccggtggatcacttgaggccaggagtttgagaccagcctggctaacagggtgaaaccccatctctactaaaaatag---aaaaattagctgggcgtggtggtgcatgtctgtaatcccagccactcgggaggctgaggcacgagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcacgccactgcactccagcctaggcgacaaagtgagactccatctcaaaaag-aaaaaaaagatagatagatgaatggatagatagctagatagatgacagatggat-gatagg------------------------------------------------------------tagatagataatt-----gataaatagatataaatgaccgatggacaggcagac--atagatacattgattaggtagatgatagatggatagatagaagatagatggtggatgggtgggtagataggcagatagacagTTagaaagatagatgatagatagataggaaggaatttattaggggaattggctcataccattgtggaggccaagatgtaccacagaaggccgtccgcaagctggaggcccaggaaagccagtatcgtggctcagtccaagtctgcaggcctcaggactgggaagctgttgatgtaactcttagtttaaggccaaaggtttgagagcctggggaactgctg s panTro4.chr17 76278249 800 + 82630442 acaggcaa----acagacaggcagacaaatggat------------agatagatgatagatagccaggcag--gcagatagaca-----------------------------------------cagacaggcagacagacagacagacagatgataggctgggttcagtgactcttacctgtaat-accagcacattggtaggctgaggccggtggatcacttgaggccaggagtttgagaccagcctggctaacatggtgaaaccccatctctactaaaaatac---aaaaattagctgggcgtggtggtacatgtctgtaatcccagctactcgggaggctgaggcacgagaatcacttgaacctgggaggtagaggttgcagtgagctgagatcatgccactgcactccagcctaggcgacaaagtgagactccatctcaaaaag-aaaaaaaagatagatagatgaatggatagatagctagatagatgacagatggat-gatagg------------------------------------------------------------tagatagataatt-----gataaacagatataaatgacagatggacaggcagacagatagatacattgattagatagatgatagatggatagatagaagatagatgatggatgggtgggtagataggcagatagacagttagaaagatagatgatagatagataggaaggaatttattaggggaattggctcataccactgtggaggccaagatgtaccacagaaggccgtccgcaagctggaggcccaggaaagccagtatcgtggctcagtccaagtctgcaggcctcaggactgggaagctgttggtgtaactcttagtttaaggccaaaggtttgagagcctgggggactgctg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67373660 793 + 73212453 ACAGGCAA----ACagacagatagacaaatggat------------ggatagatgatagatagccaggaag--gcagatagatagaca--------------tagacagg---------------cagacagacagacagacagacagacagatgataggcggggtgcagtgactcttacctgtaat-cccagcacattgggaggctgaggccggtggatcacttgagaccaggagtttgagaccagcctggctaacatggtgaaaccccatctctactaaaaatac---aaaaattagctgggcgtggtggtgcatgtctgtaatcccagctacttgggaggctgaggcacgagaatcacttgaagctgggaggtggaggttgcagtgagctgagatcacgccactgcactccagcctaggcgacaaagtgagactctatctcaaaaag-aaaaaaaagatagatagatgaatggatagatagctagatagatgacagacggat-gatagg------------------------------------------------------------tagatagataatt-----gataaatagatataaatgacagatggacaggcagacagatagatacattgattagatagatgatagatggatagatggaggatagatgatggatgggtgggtagatagaaagata-------------------gatagatagataggaaggaatttattaggggaattggctcataccattgtggaggccaagatgtaccacagaaggccttccgcaagctggagacccaggaaagcaagtatcgtggctcagtccaagtctgcagttcttaggactgggaagctgttggtgtaactcttagttcaaggccaaaggttttagagcctgggggactgctg i ponAbe2.chr17 M 404 C 0 s rheMac3.chr16 74872038 866 + 80904711 acaggcaaacagacagacaggcagacaaatggat------------agatagatgatagatagacaggcag--acagatagatagccaggcagac----agatagatagacacac---------acaggcagacaaacagacagacacacagaTGATAggctgggtgcagtgactctcacctgtaat-accagcacattggtaggctgaggccagtggatcacttgaggccagaagttcgagaccagcctggataacatggtgaaaccccatctctactataaatac---aaaaattagctgggcgtggtggtgcgtgtctgtagtcccagctactcgggaggctgaggcacgagaattgcttgaacctgggagttggaggttgcagtgagccgagatcacaccactgcactccagcctaggcgacaaagtgagactccacctcaaaaag-aataaaaaga------------------------tagacagatgatagatggat-gataggtagatagataattagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagaaatgacagatggacaggcagac----agataaactgattagatagatgatagatggatagatagaagataggtgatggatgggtgggtagataggcagatagatggatagaaatata---gatagatagataggaaggaatttgttaggggaattgacttatgccattgtagaggccaagatgtaccacagaaggctgtcctcaagctggagacccaggaaagccagtaccatggctcagtccaagtctgcgggtctcagatctgggaagctgttggtgtaactgttagttcaaggccaaaggcttgagagcctgggagactgctg i rheMac3.chr16 C 0 I 326 s macFas5.chr16 74681680 780 + 80997621 acaggcaaacagacagacaggcagacaaatggat------------agatagatgatagatagacaggcag--acagatagatagc---------------------------------------caggcagacaaacagacagacacacagatgataggctgggtgcagtgactctcacctgtaat-accagcacattggtaggctgaggccagtggatcacttgaggccagaagttcgagaccagcctggataacatggtgaaaccccatctctactataaatac---aaaaattagctgggcgtggtggtgcgtgtctgtagtcccagctactcgggaggctgaggcacgagaattgcttgaacctgggagttggaggttgcagtgagccgagatcacaccactgcactccagcctaggcgacaaagtgagactccacctcaaaaag-aataaaaaga------------------------tagacagatgatagatggat-gatagg------------------------------------------------------------tagatagataattagatagatagatagatagaaatgacagatggacaggcagac----agataaactgattagatagatgatagatggatagatagaagataggtgatggatgggtgggtagataggcagatagatggatagaaatata---aatagatagataggaaggaatttgttaggggaattgacttatgccattgtagaggccaagatgtaccacagaaggctgtcctcaagctggagacccaggaaagccagtaccatggctcagtccaagtctgcgggtctcagatctgggaagctgttggtgtaactgttagttcaaggccaaaggcttgagagcctgggagactgctg i macFas5.chr16 C 0 I 326 s papAnu2.chr16 68687652 790 + 74645514 acaggcaaacagacagacaggcagacaaatggat------------agatagatgatagacagacagatag--ccaggcagacaga----------------tagatagacacac---------acaggcagacaaacagacag----acagatgataggctgggtgcagtgcctctcacctgtaat-accagcacattggtaggctgaggccagtggatcacttgaggccaggagttcgagaccagcctggataacatggtgaaaccccatctctactataaatac---aaaaattaactgggcatggtggtgcgtgtctgtagtcccagctactcgggaggctgaggcacgagaatcgcttgaacctgggagttggaggttgcagtgagccgagatcacaccactgcactccagcctaggcgacaaagtgagactccacctcaaaaag-aaaaaaaaga------------------------tagacagatgatagatggat-gatagg------------------------------------------------------------tagatagataattagatagatagatagatagaaatgacagatggataggcagac----agataaactgattagatagatgatagatagatagatagaagataggtgatggatgggtgggtagataggcagatagatggatagaaatata---gatagatagataggaaggAATTTGTTAGGGGAATTGACTTATGCCATTGTGGAGGCCAAGATGTACCACAGAAGGCTGTCctcaagctggagacccaggaaagccagtacCATGGCTCAGTCCAAGTGTGCGGATCTCAGATCTGGGAAGCTGTTGGTGTAACTCTTAGTTCAAGGCCAAAGGCTTGAGAGCCTGGGAGACTGCTG i papAnu2.chr16 C 0 I 325 s chlSab2.chr16 30738227 796 - 75148670 acaggcaa----acagacaggcagacaaatggat------------ggatagatgat----agacaggcag--acagatagatagccaggcagac----agatagatagacacac---------acaggcagacagacagacagacagacagatgataggctgggtgcagtgactctcacctgtaat-accagcacattggtaggctgaggccagtggatcacttgaggccaggagttcgagatcagcctggataacatggtgaaaccccatctctactataaatac---aaaaattagctgggcgtggtggtgcgtgtctgtagtcccagctacttgggaggctgaggcatgagaatcgcttgaacctgggagttggaggttgcagtgagcc--gatcacaccactgcactccagcctaggcgac-aagtgagactccacctcaaaaagaaaaaaaaaga------------------------tagatagatgatagatggat-gatagg------------------------------------------------------------tagatagataattagatagataggtagatagaaatgacagatggacaggcagac----agataaactgattagatagatgatagatggatagatagaagataggtgatggatgggtgggtagataggcagatagatggatagaaataca---gatagatagataggaaggaatttgttaggggaattgacttatgccattgtggaggccaagatgtaccacagaaggctgtcctcaagctggagacccaggaaagccagtaccatggctcagtccaagtctgtgggtctcagatctggggagctgttggtgtaactcttagttcaaggccaaaggcttgagagcctgggagactgctg i chlSab2.chr16 C 0 I 326 s calJac3.chr6 114245409 793 - 158406734 acgggcag----acagacaggcagacaaatggatagacagataaacagatagatgatagataggcagacagacacagatgggcagacaggcagacgaatggatagatagagagacagatagatgacaggcaggcagacagacagacagacagaTGATAggccaggtgccgtgactcacacctgtaat-cccagcactttgggaggccaaggtgagcagatcacttgagttcagaagtttgagtccagcctggccaacatggtaaaaccccatctccactaaaaaaagaaaaaaaattacctgggcttagtcgtgtgcatcagaagtcccagctacttgagaggctgaggcagaagaattgcttgaacctgggaggtggaagttgcagtgagctgagatcacgccaccgcattccagcctgggcaacaaagtgagactccgtttcaaaaag-aaaaaaaagg------------------------tagatagatgatagatggatagctaga------------------------------------------------------------tagat-gatagatggat-gataggtagatag--atgatagacaaccggataggc----agataaattgattagatagatgatgaatgga------------------------------tagataggcagatagatggatagaaatatgattgattgacagataggaaggaatttatttcaggaattgactcatgccattgtggaggccgagatgtcccacaaaaggtcatctgtaagctggaaaccc---------agtatcgtggctcagtctaagactgcaggactcaggacggggaagctgttggtgtaactctcagtccaaggccagaggtttgagagcctgggggaccgctg i calJac3.chr6 C 0 C 0 a score=908098.000000 s hg38.chr17_GL383566v1_alt 88162 397 + 90219 gagaactgggagttctaagtccaagggcaggagaggaaggcatcccacctccaggag--aaagag--ggaattcaccttttctctgcctttttg-ttgtctggcaatggaatggtgtcatccatattgagggaggatctttaccactcagcccaccaactcacatgcccatctcctccagaaacaccctcacagacacacccagaagcgatgcgttaccagccatcccttaatccagccaaactgacacctgccgtcagccaccacaCAGGCTCAGAAGAATCGTGGTTGCATGGTGATGGTCTCCATCCCGTCTAAAGAAGTTGAAGATGAACTGTT---GGCACAAGCCA-TCGTTCTTTCAGGCTCCTTCCAGTCGttcattcttttaaaaatgtattcattg s panTro4.chr17 76279049 397 + 82630442 gagaactgggggttctaagtccaagggcaggagaggaaggcatcccacctccaggag--aaagag--ggaattcaccttttctctgcctttttg-ttgtctggcaatggaatggtgtcatccatattgagggaggatctttaccactcagcccaccaactcacatgcccatctcctccagaaacaccctcacagacacacccagaagcaatgcgttaccagccatcccttaatccagccaaactgacacctgccgtcagccaccacaCAGGCTCAGCAGAATCGTGGTTGCATGGTGATGGTCTCCATCCTGTCTAAAGAAGTTGAAGATGAACTGTT---GGCACAAGCCA-TCGTTCTTTCAGGCTCCTTCCAGTCGttcattcttttaaaaatgtattcattg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67374453 391 + 73212453 gagaactgggagttctaagtctaagggcaggagaggaaggcatcccagctccaggagaaaaagag--ggaattcaccttttctctgcctttttg-ttgtctggcaatggaatggtgtcatccatattgagggaggatctttaccactcagcccaccaactcacatgcccatctcctccagaaacaccctcacagacacacccagaagcaatgcgttaccggccattccttaatccagtcaaactgacacctgccgtcggccaccacaCAGGCTCAGCAGAATGGTGGTTGCATGGTGATGGTCTCCATCCCGTCTAGAGAAGTTGAAGATGAACTGTT---GGCACAAGCCA-TCG----TTCAGGCTCCTTCCa----tacattcttttaaaaatgtattcattg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74873230 398 + 80904711 gagaactgggagttctaagtccaagggcaggagaagaagacat-ccagctccaggag--aaagaga-ggaattcaccttttctctgcctttttg-ttgtctggccatggaatggtgtcatccacagtgagggaggatctttaccactcagcccaccaacttacatgcccatctcctccagaaacaccctcacagacacacccagaagcaatgcattaccagccatcccttaatccagccaaactgacacccgccatcagccaccacaCCGGCTCAGCAGAACCGTGGTTGCATGGCGATGGTCTCCATCCCATCTAAAGAAGTTGAAGATGAACTGTT---GGCACAAGCCAGTCGTTCTTTCAGGCTCCTTCCAGTTGttctttcttttaaaaatgtatttattg i rheMac3.chr16 I 326 C 0 s macFas5.chr16 74682786 398 + 80997621 gagaactgggagttctaagtccaagggcaggagaagaagacat-ccagctccaggag--aaagaga-ggaattcaccttttctctgcctttttg-ttgtctggccatggaatggtgtcatccacagtgagggaggatctttaccactcagcccaccaacttacatgcccatctcctccagaaacaccctcacagacacacccagaagcaatgcattaccagccatcccttaatccagccaaactgacacctgccatcagccaccacaCCGGCTCAGCAGAACCGTGGTTGCATGGCGATGGTCTCCATCCCATCTAAAGAAGTTGAAGATGAACTGTT---GGCACAAGCCAGTCGTTCTTTCAGGCTCCTTCCAGTTGttctttcttttaaaaatgtatttattg i macFas5.chr16 I 326 C 0 s papAnu2.chr16 68688767 399 + 74645514 gagaactGGGAGTTCTaagtccaagggcaggagaagaagacAT-CCAGCtccaggag--aaagaga-ggaaatcaccttttctctgcctttttgtttgtcTGGCCATGGAATGGTGTCATCCACAGTGAGGGAGGATCTTTACCACTCAGCCCACCAACTTACATGCCCATCtcctccagaaacaccctcagagacacacccagaAGCAAAGCATTACCAGCCatcccttaatccagtcaaaCTGACACCTGCcatcagccaccacaccggctCGGCAGAACCGTGGTTGCATGGCGATGGTCTCCATCCCATCTAAAGAAGTTGAAGATGAACTGTT---GGCACAAGCCAGTCGTTCTTTCAGGCTCCTTCCAgttgttctttcttttaaaaatgtatttactg i papAnu2.chr16 I 325 C 0 s chlSab2.chr16 30739349 398 - 75148670 gagaactgggagttctaagcccaagggcaggagaagaagacat-ccagctccaggag--aaagaga-gaaattcaccttttctctgcctttttg-ttgtctggccatggaatggtgtcatccacattgagggaggatctttaccactcagcccaccaacttacatgcccatcttctccagaaacaccctcacagacacacccagaagcaatgcattaccagccatcccttaatccagccaaactgacacctgccatccaccaccacaCCGGCTCAGCAGAACCGTGGTTACATGGCAATGGTCTCCATCCCATCTAAAGAAGTTGAAGATGAACTGTT---GGCACAAGCCAGTCGTTCTTTCAGGCTCCTTCCAGTTGttctttcttttaaaaatgtatttattg i chlSab2.chr16 I 326 C 0 s calJac3.chr6 114246202 400 - 158406734 gagaactgggagttctaagtccaagggcaggagaagaagtcatcccagctccaggag--aaagagagggaattcaccttttctctgccttttta-ttgtctgtcagtggaatggtggcatccacactgatggaggatctttaccattcagcccgccaactcacatgcccat---ctccaaaaccaccctcatagacacacccagaagtaatgcgccaccagccatcccttcatccagccaaactgacccctgacatcagccaccacaCAGGCTCAGCAGAATCGTGGTTACACAGTGCTGGCCTCTATCCCGCCCTCAGAAGTTGAAGGTGAACTGCTTGGTGCACAAGCCAGTAGTTCTTTCAGGCTCCTTCCAGTTGTTTGTTCTTTTAAAAACGAGTTTATTg i calJac3.chr6 C 0 I 871 a score=296628.000000 s hg38.chr17_GL383566v1_alt 88559 164 + 90219 agcacctgctgcatgccaggtgctgtgacaagcactggggcacagcagtgagcaaacaaggactcttgtttcttggagtttacatgcagtagaaggaaac--agaatcaatgaattcatcagttctag-aaactatcaaaataggactaagagctgtggtgagaatt s panTro4.chr17 76279446 165 + 82630442 agcacctgcagcatgccaggtgctgtgacaagcactggggcatagcagtgagcaaacaaggactcttgtttcttggagtttacatgcagtagaaggaaac--agaatcaatgaattcatcagttctagaaaactatcagaataggactaagagctatggtgagaatt i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67374844 165 + 73212453 agcacctgctgtatgccaggtgctgtgacaagcactggggtacagtagtgagcaaacaaggactcctgtttcttggagtttacatgcagtagaaggaaac--agaatcaatgaattcatcagttccagaaaactatcaaaataggactaagagctatggcgagaatt i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74873628 167 + 80904711 agcacctgctgtatgccaggtgctgtgacaagcactagggcacagcagtgagcaaacaaggactcttctttcttggagtgtacatgcggtagaaggaaacagagaatcaatgaattcatcagttccagaaaactgtcaaaataggactaagaactatgccgagaatt i rheMac3.chr16 C 0 I 320 s macFas5.chr16 74683184 167 + 80997621 agcacctgctgtatgccaggtgctgtgacaagcactagggcacagcagtgagcaaacaaggactcttctttcttggagtgtacatgcggtagaaggaaacagagaatcaatgaattcatcagttccagaaaactgtcaaaataggactaagaactatgccgagaatt i macFas5.chr16 C 0 I 323 s papAnu2.chr16 68689166 167 + 74645514 agcacctgctgtatgccaggTGCTGTGACAAGCACTAGGGCACAGCAGTGAGCAAACAAGGACTCTTCTTTCTTGGAGTGTACCTGCGGTAGAAGGAAACAGAGAATCAATGAATTCATCAGTTCCAGAAAACTGTCAAAATAGGACTAAGAACTATGCCGAGAATT i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30739747 167 - 75148670 agcacctgctgtatgccaggtgctgtgacaagcactagggcacagcagtgagcaaacaaggactcttctttcttggagtgtacatgcggtagaaggaaacagagaatcaatgaattcatcagttccagaaaactgtcaaaataggactaagaactatgccgagaatt i chlSab2.chr16 C 0 C 0 e calJac3.chr6 114246602 871 - 158406734 I a score=28824.000000 s hg38.chr17_GL383566v1_alt 88723 15 + 90219 aagataaggtgattg s panTro4.chr17 76279611 15 + 82630442 aagataaggtgattg i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67375009 15 + 73212453 aagataaggtgattg i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74874115 15 + 80904711 aagataaggtgattg i rheMac3.chr16 I 320 C 0 s macFas5.chr16 74683674 15 + 80997621 aagataaggtgattg i macFas5.chr16 I 323 C 0 s papAnu2.chr16 68689333 15 + 74645514 AAGATAAGGTGATTA i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30739914 15 - 75148670 aagataaggtgattg i chlSab2.chr16 C 0 C 0 e calJac3.chr6 114246602 871 - 158406734 I a score=2296985.000000 s hg38.chr17_GL383566v1_alt 88738 1057 + 90219 catagaaagtgactgatggctgctttggaatgagtggtgaggggt-cacagagatgatgacagctgagttgagattgggaagacaggaaggagccagcagtgcaaggactaggctggaagcaagcttggtgcattccaggaacagcaaggaggccaga--ggggctgcagtagagcaggcgaggaggaggagggagacgcaggtcaaagaggagcctgggg-ccagatGGAGGACCCTCCCTCCAAAGCTCAGTCATTTCCTCCTT-AAAGGAGAATGTGTTACCTCCAAAAGTCACATATGCCAGCACAGTGTCTGGCTCATCATATGCCTTCAGTAGGCGGTGAGCATGGCTGTTCTTGTTATTACTACATCACAATTACTAGGAATAATGGAGTCACCAGGCTTTGCATTTACAGCAATGTGAGGGAGTCAGCAAGCTTCCCTGGGGAACCCATCTCCCCTCACTAAGTTCATAAGAGCCTGATAACCAGGTCAATGTAGTGAGAGCTATAGCTGCCCAGTGTACTGGACTCTTTAGCCACGGGCCAGGACACTTTCATCTCAGCAGAAACCTCT--------------------------AAGGGGACTGGGGAGTGTGCTGTGGATGTTTCTGGGTTACTCAGACCTCCTGGGGAGCCTTCCCCACCGCAGCTGCTGCAGGGAGCTCAGCTGCAGT----GATGAACTGCGGCTCAGCC---------TTGTTTATGGGAAAACCCTACATGGGAGATGGGACGGTTTCCTGTTGGTTCTCTCGGCCTCAGGTTGCTTTCACAAGTGCAGGGATTCTCACCTGGGTGTGTGAATGGGGCTCAGGATGCCCCAAGGGTATGTGGAGATGGGGGTCAGCTGTCTTCTCTGATGCCTCTGAACCTCCTCCCCCTGCCTTTCTGCATCTCATTGCTTCCTGGCCTCTCTCACTTTGGGTGCTTTGGAACAACATGCAATCCAATACACAGGCTGACTTTATTATTTTGTTTTGttttattttattttattttggaaacaaaggctctgtcattcagcctggagtgcagcggtgcaattgcaactcactgcagccttgaac s panTro4.chr17 76279626 1053 + 82630442 catagaaagtgaccgatggctgctttggaatgagtggtgaggggt-cacagagatgatgacagctgagttgagattgggaagacaggaaggagccagcagtgcaaggactaggctgggagcaagcttggtgcattccaggaacagcaaggaggccaga--ggggctgcagtagagcacgggacgaggaggagggagacgcaggtcaaagaggagcctgggg-ccagatGGAGGACCCTCCCTCCAAAGCTCAGTCATTTCCTCCTT-AAAGGAGAATGTGTTACCTCCAAAAGTCACATATGCCAGCACAGTGTCTGGCTCATCATATGCCTTCAGTAGGCGGTGAGCATGGCTGTTCTTGTTATTACTACATCACAATTACTAGGAATAATGGAGTCACCAGGCTTTGCATTTACAGCAATGTGAGGGAGTCAGCAAGCTTCCCCGGGGAACCCATCTCCCCTCACTAAGTTCATAAGAGCCTGATAACCAGGTCAATGTAGTGAGAGCTATAGCTGCCCAGTGTACTGGACTCTTTAGCCACGGGCCAGGACACTTTCATCTCAGCAGAAACCTCT--------------------------AAGGGGACTGGGGAGTGTGCTGTGGATGTTTCTGGGTTACTCAGACCTCCTGGGGAGCCTTCCCCACCACAGCTGCTGCAGGGAGCTCAGCTGCAGT----GATGAACTGCGGCTCAGCC---------TTGTTTATGGGAAAACCCTACGTGGGAGATGGGACGGTTTCCTGTTGGTTCTCTCGGCCTCAGGTTGCTTTCACAAGTGCAGGGATTCTCACCTGGGTGTGTGAATGGGGTCCAGGATGCCCCAAGGGTATGTGGAGATGGGGGTCAGCTGTCTTCTTTGATGCCTCTGAACCTCCTCCCCCTGCCTTTCTGCATCTCATTG----CTGGCCTCTCTCACTTTGGGTGCTTTGGAACGACATGCAATCCAATACACAGGCTGACTTTAttattttgttttgttttattttattttattttGGAAACAAAGTctctgtcattcagcctggagcgcagcggcgcaattgcaactcactgcagccttgaac i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67375024 1057 + 73212453 catagaaagtgactgatggctgctttggaatgagtggtgacgggt-cacagaggtgatgacagctgagttgagattgggaagacaggaaggagccagcaatgcaaggactaggctgggagcaagcttggtgtattccaggaacagcaaggaggccaga--ggggctgcagtggagcaggggaggaggaggagggagacgcaggtcaaagaggagcctgggg-caagatGGAGGACCCTCCCTCCAAAGCTCAGTCATTTCCTCCTT-AAAGGAGAATGTGTTACTTCCAAAAGTCACACATGCCAGCACAGTGTCTGGCTCATGATATGCCTTCAGTAGGCAGGGAGCATGGCTGCTCTTGTTATTACTACATTATAATTACTGGGAATAATGGAGTCACCAGGCTTTGCATTTACAGCAACGTGAGGGTGTCAGCAAGCTTCCCCAGGGAACCCACCTCCCCTCACTAAGTTCATAAGAGCCTGACAAACAGGTCAATGTAGTGAGAGCTACAGCTGCCCAGTGTACTGGACTCTTTAGCCACGGGCCAGGACACTTTCATCTCAGCAGAAACTTCT--------------------------AAGGGGACTGGGGAGTGTGCTGTGGATGTTTCTGGCTTACTCAGACCTCCTGGGGAGCCTTCCCCACCACAGCTGCTGCAGAGACCTCAGCTGCAGT----GATGAGCTGTGGCTCAGCC---------TTGTTTATGGGAAAACCCTACATGGGAGATGGGACGGTTTCCTGTTGGTTCTCTCAGCCTCAGGCTGCTTTCACAAGTGCAGAGATTCTCACCTGGGTGTGTGAATGGGGCTCAGGATGCCCCAAGGGTATGTGGAGATGGGGGTCAGCTGTCTTCTCTAATGCCTCTGAACCTCCTCCCCCTGCCTTTCTGCATCTCGTTGCTTCCCAGCCTCTTTCACTTTGGGTGCTTTGGAACAACATGCAATCCAATACACAGGCTGACTTTAttattttattttgttttattttattttattttggagacaaagtctctgtcactcagcctggagtgcagtggtgcaattgcaactcactgcagccttgaac i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74874130 987 + 80904711 catagaaggtgactgatggctgctttggaatgagtggtgaggggt-cacagggatgatgacagctgagttgagactgggaagacaggaaggagccagcagtgaaaggactgagctgggagcaagcttggtgccttccaggaacagcaaggaggccaga--ggggctgcggtggagcaggggagggggaggagggagacgcaggtcaaagaggagcctgggg-ccagatGGAGGACCCTTCCTCCAAAGCTCAGTCATTTCCTCCTT-AAAGGAGAATGTGTTACCTCCAAAAGTCACACTTGCCAGCACAGTGTCTGGCTCATCATATGCCTTCAGTCGGCGGTGAGCATGGCTGCTCTTGTTATTACTACATTATAATTACTAGGAATAATGGGGTCACCAGGCTTTGCGTTTACAGCAACGTGAGGGTGTCAGCAAGCTTCCCTGGGGAACCCATCTCCCCTCACTAAGTTCATAAGAGCCTGACAGCCAGGTCAATGTAGTAAGAACTACAGCTGCCCAGTGGACTGGACTCTTTAGCCAGGGGCCAGGGCACTTTCATCTCAGCAGAAACCTCT--------------------------AAGGGGACTGGGGAGTGTGCTGTGGATATTTCTGGGTTACTCAGGCCTCCTTGGGAGCCTTCCCCACCACAGCTGCTGCAGGGAGCTCAGTTGCAGT----GATGAGCTGCGGCTCAACC---------TTGTT----------------------------------------------------------------------AGTGCAGAGATTGTCACTTGGGTGAGTGAATGGGGCTCAGGATGCCCCAAGGGTATGTGGAGATGGGGGTCAGCTGTCTTCTCTGATGCCTTGCAACCTCCTGCCCCTGCCTTTCTGCATCTCGTTGCTTCCTGGCCTCTCTCACTTTGGGTGCTTTGGAACGACATGCAATCCAATACACAGGCTGACTTTAttattttattttgttttgttttattttattttggagacaaagtctctgtcactcaggctggagtgcagtggtgcaattgcagctcactgcagccttgaac i rheMac3.chr16 C 0 C 0 s macFas5.chr16 74683689 987 + 80997621 catagaaagcgactgatggctgctttggaatgagtggtgaggggt-cacagagatgatgacagctgagttgagactgggaagacaggaaggagccagcagtgaaaggactgagctgggagcaagcttggtgccttccaggaacagcaaggaggccaga--ggggctgcagtggagcaggggagggggaggagggagacgcaggtcaaagaagagcctgggg-ccagatGGAGGACCCTTCCTCCAAAGCTCAGTCATTTCCTCCTT-AAAGGAGAATGTGTTACCTCCAAAAGTCACACTTGCCAGCACAGTGTCTGGCTCATCATATGCCTTCAGTCGGCGGTGAGCATGGCTGCTCTTGTTATTACTACATTATAATTACTAGGAATAATGGGGTCACCAGGCTTTGCGTTTACAGCAACGTGAGGGTGTCAGCAAGCTTCCCTGGGGAACCCATCTCCCCTCACTAAGTTCATAAGAGCCTGACAGCCAGGTCAATGTAGTAAGAGCTACAGCTGCCCAGTGGACTGGACTCTTTAGCCAGGGGCCAGGGCACTTTCATCTCAGCAGAAACCTCT--------------------------AAGGGGACTGGGGAGTGTGCTGTGGATGTTTCTGGGTTACTCAGGCCTCCTTGGGAGCCTTCCCCACCACAGCTGCTGCAGGGAGCTCAGTTGCAGT----GATGAGCTGCGGCTCAACC---------TTGTT----------------------------------------------------------------------AGTGCAGAGATTGTCACTTGGGTGAGTGAATGGGGCTCAGGATGCCCCAAGGGTATGTGGAGATGGGGGTCAGCTGTCTTCTCTGATGCCTTGCAACCTCCTGCCCCTGCCTTTCTGCATCTCGTTGCTTCCTGGCCTCTCTCACTTTGGGTGCTTTGGAACGACATGCAATCCAATACACAGGCTGACTTTATTATTTTATTTTGttttgttttattttattttggagacaaagtctctgtcactcaggctggagtgcagtggtgcaattgcagctcactgcagccttgaac i macFas5.chr16 C 0 C 0 s papAnu2.chr16 68689348 987 + 74645514 CGTAGAAAGTGACTGATGGCTGCTTTGGAATGTGTGGTGAGGGGT-CCCAGAGATGATGACAGCTGAGTTGAGATTGGGAAGACATGAAGGAGCCAGCAGTGAAAGGACTGAGCTGGGAGCAAGCTTGGTGCCTTccaggaacagcaaggaggccaga--ggGGCTGCGGTGGAGCAGGGGAGCGGGAGGAGGGAGACGCAGGTCAAAGAGGAGCCTGGGG-CCAGATGGAGGACCCTTCCTCCAAAGCTCAGTCATTTCCTCCTT-AAAGGAGAATGTGTTACCTCCAAAAGTCACACTtgccagcacagtgtctggctcaTCATATGCCTTCAGTCGGCGGTGAGCATGGCTGCTCTTGTTATTACTACATTATAATTACTAGGAATAATGGAGTCACCAGGCTTTGCGTTTACAGCAACGTGAGGGTGTCAGCAAGCTTCCCTGGGGAACCCATCTCCCCTCACTAAGTTCATAAGAGCCTGACAGCCAGGTCAATGTAGTAAGAGCTACAGCTGCCCAGTGGACTGGACTCTTTAGCCAGGGGCCAGGGCACTTTCATCTCAGCAGAAACTTCT--------------------------AAGGGGACTGGGGAGTGTGCTGTGGATGTTTCTGGGTTACTCAGGCCTCCTTGGGAGCCTTCCCCACCACAGCTGCTGCAGGGAGCTCAGTTGCAGT----GATGAGCTGCGGCTCAACC---------TTGTT----------------------------------------------------------------------AGTGCGGAGATTGTCACTTGGGTGAGTGAATGGGGCTCAGGATGCCCCAAGGGTATGTGGAGATGGGGGTCAGCTGTCTTCTCTGATGCCTTGCAACCTCCTCCCCCTGCCTTTCTGCATCTCATTGCTTCCTGGCCTCTCTCACTTTGGGTGCTTTGGAATGACATGCAATCCAATACACAGgctgactttattattttattttgttttattttattttattttggagacaaagtctctgtcactcaggctggagtgcagtggtgcaattgcagctcactgcagccttgaac i papAnu2.chr16 C 0 C 0 s chlSab2.chr16 30739929 988 - 75148670 catagaaagtgactggtggctgctttggaatgagtggtgaggggt-cacagagatgatgacagctgagttgagattgggaagacaggaaggagccagcagtgaaaggactgagctgggagcaagcttggtgccttccgggaacagcaaggaggccagagcggggctgcgatggagcaggggacggggaggagggagacgcaggtcaaagaggagcctgggg-ccagatGGAGGACCCTTCCTCCAAAGCTCAGTCATTTCCTCCTT-AAAGGAGAATGTGTTACCTCCAAAAGTCACACTTGCCAGCACAGTGTCTGGCTCATCATATGCCTTCAGTCGGCGGTGAGCATGGCTGCTCTTGTTATTACTACATTATAATTACTAGGAAAAATGGAGTCACCAGGCTTTGCGTTGACAGCAACGTGAGGGTGTCAGCAAGCTTCCCT-GGGAACCCATCTCCCCTCATTAAGTTCATAAGAGCCTGACAGCCAGGTCAATGTAGTAAGAGCTACAGCTGCCCAGTGGACTGGACTCTTTAGCCAGGGGCCAGGGCACTTTCATCTCAGCAGAAACCTCT--------------------------AAGGGGACTGGGGAGTGTGCTGTGGCTGTTTTTGGGTTTTTCAGGCCTCCTGGGGAGCCTTCCCCACCACAGCTGCTGCAGGGAGCTCCGCTGCAGT----GATGAGCTGCGGCTCAACC---------TTGTT----------------------------------------------------------------------AGTGCAGAGATTGTCACTTGGGTGAGTGAATGGGGCTCAGGATGCCCCAAGGGTATGTGGAGATGGGGGTCAGCTGTCTCCTCTGATGCCTTGCAACCTCCTCCCCCTGCCTTTCTGCATCTCGTCGCTTCCTGGCCTCTCTCACCTTGGGTGCTTTGGAACGACATGCAATCCAATACACAGGCTGACTTTAttattttattttgttttattttattttattttGGAGACAAATTctctgtcacttaggctggagtgcagtggtgcaattgcagctcactgcagccttgaac i chlSab2.chr16 C 0 C 0 s calJac3.chr6 114247473 1062 - 158406734 CGTAGAAAGTGACCTGATGCTGCCtttgaatgagtggtgaggggtgaacagaga-gatgacagctgagttgagattggcaagacaggaaggggccagcagtgtaaggactgggctgggagcaagctcggtgcattccaggaatagcaagaaggccaga--ggggctgcagcagggcaggggagggggaggaaggag-cacaggtcacagaggagcctggggcccagatGGAGGACCTTTCCTCCAAAGCTCAGTTGTTTTCTCTGTAAAAGGAGAACGTGTCCCCTCCAAAAGTCACACATGCCAGCACAGTGTCTGGCTCATCATACGCCTTCAGTAGGCGGTGAGCATGGCTGCTCTTCTTATTACTGCATTAT-ATTACTAGGCATAATGAGGTCACCAGGCTTTGCATTTACAGCAACGTAAGGGTGTCAGCAAGCTTCCCTGGGGAACCCACCTCCCCTCACTAAGTTCCTAAGAGCCTGACAACCAGGTTAATGTAGTGAGAGCTACAGTTGCCTGGTGGACTGGAATCTTTAGCCACAGGCCACGGCACTTTCATTTTAACAGAAACCTCTACTTGAGGAAGTGGGTTGATGGCAGAAAGGGGGCTGGAGGGTGTGCCATGGATGTTTCTGGTTTACTCTGACCTCCTGGGGAGCCTTCCCCACCACAGCTGCTATAGGGAGCTCAGCTGCAGTGATGGATGAGCTGCAGCTCAGCCTTGAATTCATTGTTTATTGGAAAGCCTTACATGGGATATGGGATGGTTTCCTGCTGGTTCTTTTGCT-----------------AGTGCAGAGATTCTCACCTGGGTGTGTGACTGGGGCTCAGGATGCCCCACAGGTATGTGGAGATGGGGGTCAG-TGTCTTGTCTCATGTCTCTGAACCTCCTCCTCCTGCCTGTCTGTATTTTGTTTCTTCCTGGCCTTTCCCACTTT-GGTGCTTTGGAATGAGATGCAATCCAATACACAGGCTGACTTTATTA---------------ttttattttattttgtagacaaggtctctgtcactcaggctggcgagcggtggtgtgatcacaactcactgcagccttgaac i calJac3.chr6 I 871 I 139 a score=631944.000000 s hg38.chr17_GL383566v1_alt 89795 259 + 90219 ttctgggctcaagtgattctctcgcctcagcctctcaaagtgctgggattacaggcatgagctgctgtgcctggcCTAGGCTGGCTTTAAAAGCTCCTCACTCTCTCTGCATCCTGATGATACCTACCTCCTGGAGCAGGCTCCCAGCCATTGGCTTCGGATACTTTgtagctattattggccagttgtggcatgtgaagctgaggctcaggagaagggcagtcctgtccaaggccacacggctcagtgctaacactca s panTro4.chr17 76280679 259 + 82630442 ttctgggctcaagtgatcctcttgcctcagcctctcaaagtgctgggattacaggcatgagctgctgtgcctggcCTAGGCTGGCTTTAAAAGCTCCTCACTCTCTCTGCTTCCTGATGATACCTACCTCCTGGAGCAGGCTCCCAGCCATTGGCTTCTGATACTTTgtagctattattggccagttgtggcatgtgaagctgaggctcaggagaagggcagtcctgtccaaggccacacggctcagtgctaacactca i panTro4.chr17 C 0 C 0 s ponAbe2.chr17 67376081 259 + 73212453 ttctgggctcaagtgatcctcttgcctcagcctctcaaagtgctgggattacaggcatgagctgctgtgcctggcCTAGGCTGGCTTTAAAAGCTCCTCACTCTCTCTGCATCCTGATGATACCTACCTCCTGGAGCAGGCTCCCAGCCATTGGCTTCTGACACTTTGTAGCTATTGTTGGCCAGTTGTGGCATGTgaagctgaggctcaagagaagggcagtcctgtccaaggccacacggctcagtgctaacactca i ponAbe2.chr17 C 0 C 0 s rheMac3.chr16 74875117 259 + 80904711 ttctgggctcaagtgatcctcttgcctcagcctcccaaagtgctagcattacaggcatgagctgctgtgcctggACTAGGCTGGCTTTAAAAGCTCCTCACTCTCTCTGCATCCTGATGATACCTACCTCCTGGAGGAGGCTCCCAGCCATTGGCTTCTGACACTTTGTAGCTATTGTTGGCCAGTTGTGGCATGTgaagctgaggctcaagagaagggcaggcctgtccaaggccacacggctcagtgctaacactca i rheMac3.chr16 C 0 I 327 s macFas5.chr16 74684676 259 + 80997621 ttctgggctcaagtgatcctcttgcctcagcctcccaaagtgctagcattacaggcatgagctgctgtgcctggACTAGGCTGGCTTTAAAAGCTCCTCACTCTCTCTGCATCCTGATGATACCTACCTCCTGGAGGAGGCTCCCAGCCATTGGCTTCTGACACTTTgtagctattgttggccagttgtggcatgtgaagctgaggctcaagagaagggcaggcctgtccaaggccacacggctcagtgctaacactca i macFas5.chr16 C 0 I 327 s papAnu2.chr16 68690335 259 + 74645514 ttctgggctcaagtgatcctcttgcgtcagcctcccaaagtgctagcattacaggcatgagctgctgtgcctggacTAGGCTGGCTTTAAAAGCTCCTCACTCTCTCTGCATCCTGATGATACCTACCTCCTGGAGGAGGCTCCCAGCCATTGGCTTCTGACACTTTGTAGCTATTGTTGGCCAGTTGTGGCATGTGAAGCTGAGGCTCAAGAGAAGGGCAGGCCTGTCCAAGGCCACACGGCTCAGTGCTAACACTCA i papAnu2.chr16 C 0 I 327 s chlSab2.chr16 30740917 259 - 75148670 ttctgggctcaagtgatacccttgcctcagcctcccaaagtgctagcattacaggcatgagctgctgtgcctggcCTAGGCTGGCTTTAAAAGCTCCTCACTCTCTCTGCATCCTGATGATACCTACCTCCTGGAGCAGGCTCCCAGCCATTGCCTTCTGACACTTTGTAGCTATTGTTGGCCAGTTGTGGCATGTgaagctgaggctcaagagaagggcaggcctgtccaaggccacacggctcagtgctaacactca i chlSab2.chr16 C 0 I 320 s calJac3.chr6 114248674 249 - 158406734 tcctgggctcaagtgatcctcttgcctcagcctcccaaagtgctgggattacaggcatgagccactgtgcctggccTAGG-TGGCTTTAAAAGCTCCTCACTCTCTTTGCAGCTTGATGATATCTATCTCCTGGAGTAGCCTCT------TTGGCTTCTGACACTTTGTAGCTA---TTGGCCAGCTGTGGCATGTGAAGCTGAGGCTCAAGAGAAGGGCAGTCCTGTCCAAGACCACGTGGCTCAGTGCTAACACTCA i calJac3.chr6 I 139 C 0 a score=393789.000000 s hg38.chr17_GL383566v1_alt 90054 165 + 90219 gacttcagtgtttttatctccCTCCTGGTCGCTTCCACCCTTAGTGCATCTCT-------------GGAGGCCCAAGGGAGCTAAAGGCCAGGCTTTGGTCAGCTAAGAATTTAAAAAAGCTGTCTCTGTGCTCCTCTGTCAATCCATCACTCCATTATCTCCCCCGACAATGAATTC s panTro4.chr17 76280938 165 + 82630442 gacctcagtgtttttatctccctcctggtcgcttccacCCTTAGTGCATCTCT-------------GGAGGCCCAAGGGAGCTAAAGGCCAGGCTTTGGTCAGCTAAGAATTTAAAAAAGCTGTCTCTGTGCTCCTCTGTCAATCCATCACTCCATTATCTCCCCCGACAATGaattc i panTro4.chr17 C 0 N 0 s ponAbe2.chr17 67376340 165 + 73212453 gacctcagtgtttttatctccctcctggtcgcttccacCCTTAGTGCATCTCT-------------GGAGGCCCAAGGGAGCTAAAGGCCAGGCTTTGGTCAGCTAAGAATGTAAAAAAGCTGTCTCTGTGCTCCTCTGTCAATCCATCACTCCATTATCTCCCCCAACAATGaattc i ponAbe2.chr17 C 0 N 0 s rheMac3.chr16 74875703 165 + 80904711 GACTTCAGTGTTTTTATCTCCCTCCTGGTCACTTCCACCCTTAGTGCATCTCT-------------GGAGGCCTGAGGGAGCTAAAGACCAGGCTTTGGTCAGCTAAGAATTTACAAAAGCTATCTCTGTGCTCCTCTGTCAGTTCATCACTCTGTTATCTCCCCCGACAATGaattc i rheMac3.chr16 I 327 N 0 s macFas5.chr16 74685262 165 + 80997621 GACTTCAgtgtttttatctccctcctggtcactTCCACCCTTAGTGCATCTCT-------------GGAGGCCCGAGGGAGCTAAAGACCAGGCTTTGGTCGGCTAAGAATTTACAAAAGCTATCTCTGTGCTCCTCTGTCAGTTCATCACTCTGTTATCTCCCCCGACAATGaattc i macFas5.chr16 I 327 N 0 s papAnu2.chr16 68690921 165 + 74645514 gacttcaGTGTTTTTATCTCCCTCCTGGTCACTTCCACCCTTAGTGCATCTCT-------------GGAGGCCCAAGGGAGCTAAAGAGCAGGCTTTGGTCAGCTAAGAATTTACAAAAGCTATCTCTGTGCTCCTCTGTCAGTTCATCACTCTGTTATCTCCCCCGACAATGAATtc i papAnu2.chr16 I 327 N 0 s chlSab2.chr16 30741496 165 - 75148670 GACTTCAGTGTTTTTATCTCCCTCCTGGTCACTTCCACCCTTAGTGCATCTCT-------------GGAGGCCCGAGGGAGCTAAAGACCAGGCTTTGGTCAGCTAAGAATTTACAAAAGCTGTCTCTGTGCTCCTCTGTCAATTCATCACTCTGTTATCTCCTCCGACAATGaattc i chlSab2.chr16 I 320 N 0 s calJac3.chr6 114248923 178 - 158406734 GACCTTAGTGTTTTTATTTCCCTCCTGGTGGCTTCCACCCTTAGTGCATCTCTGGAGGTGCAGTAAGGAGGCCCGAGGGAGCTAAAGGCCAGGTTCCAGTCAGCTAAGAATTAAAAACAGCTGTCTCTGTGCTCCTCTGTCAATCTACTACTCCATTATCTCCCCCgacaacgaattc i calJac3.chr6 C 0 N 0